BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy11701
         (745 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|328788305|ref|XP_395296.3| PREDICTED: neuroglian [Apis mellifera]
          Length = 1251

 Score =  652 bits (1682), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/757 (49%), Positives = 463/757 (61%), Gaps = 80/757 (10%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           R+EYK+GNR+LLNVI++GISASQN+H P +QYV+RK EVALR KK+EL+CI+GGTPLPQ 
Sbjct: 213 RNEYKLGNRVLLNVISSGISASQNKHDPVKQYVSRKNEVALRGKKIELYCIYGGTPLPQI 272

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +WSK+G  I  +DRI QGNYGKSLIIKHV F D+G+YTCE SNGVG+AKSYSI L V+A 
Sbjct: 273 VWSKNGEVIRTNDRIMQGNYGKSLIIKHVNFKDKGTYTCEASNGVGDAKSYSIHLQVMAV 332

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFT+EPE INAAE+ET+ F+C+A G+P PEI W+HNGKPIS+APPNPRRKV  N I IE
Sbjct: 333 PYFTIEPEIINAAEDETIEFKCEADGVPVPEIKWIHNGKPISEAPPNPRRKVTSNSIIIE 392

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
            L K DTGNYGCNATNSLGYVYKDVYVNVLA  PEIT+ P D  TVDGKTV +TCRVFGA
Sbjct: 393 KLTKKDTGNYGCNATNSLGYVYKDVYVNVLALEPEITQPPTDIATVDGKTVRITCRVFGA 452

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP V WI N +ELTGGRY  L++GDL+I +V F D+G YTC A NK G  +GSG+L VK
Sbjct: 453 PKPAVKWIRNGQELTGGRYKTLDSGDLEIENVIFLDAGIYTCHASNKFGEVEGSGNLVVK 512

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           EHT ITD+PEDYEV AG +ATFRCNAV+D SL L+I WL   EPIDFE EPRF++S DYS
Sbjct: 513 EHTRITDEPEDYEVAAGSTATFRCNAVTDSSLTLTIDWLSNGEPIDFEMEPRFIRSTDYS 572

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           L +TK++ELDSG YTC A TELD  +AQATL VQ    AP   ++  +  A +A + W P
Sbjct: 573 LMITKTTELDSGTYTCIAHTELDEAKAQATLIVQDVPNAPKLISITCM--ATEASIHWTP 630

Query: 426 VSPQSLRGHFRGYKVQ---TWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS--KNFA-R 479
           +     R     Y +Q   T+T    E       ++K +    E    VP S   N+  R
Sbjct: 631 MGDN--RAPILRYTIQHNTTFTPDTWE-------ISKDDVPAIEQTYVVPMSPWTNYTFR 681

Query: 480 VLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKW-VKPE-QPNG 532
           VLA+N      PS      T     P   P  V      P       + W V P+ + N 
Sbjct: 682 VLAWNKIGTSLPSPHSDVCTTLQDVPYKNPDNVMGKGTTP---QNLVISWTVMPQIEHNA 738

Query: 533 VLMGYKIKY-QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
               Y+I Y + + G K       +  I+D    +  +       +Y+I +    + G+ 
Sbjct: 739 PKFMYRIYYRRDIPGEKW-----TIEDITDWKKNNLVVDNQPTYQRYKIKVVAINEKGEC 793

Query: 592 --AESKYLFY----VPFKNPDNVE-GRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
             A  + + Y    VP + P N    +  +  +   SW  +PE         Y+I     
Sbjct: 794 RVAPEEVIGYSGEDVPLQAPSNFTLNQVKSSTSAQFSWNPVPEESVRGELKGYKI----- 848

Query: 645 NTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTT 704
                                              QTWTEKDGE  +RE+ +  G  T  
Sbjct: 849 -----------------------------------QTWTEKDGEKGMREIDIRGGNRTHA 873

Query: 705 EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
            V KF+P SKN+ R+LA+NG Y+GPPSE +SF TPEG
Sbjct: 874 LVTKFIPFSKNYVRILAYNGRYSGPPSETLSFDTPEG 910



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 125/248 (50%), Positives = 165/248 (66%), Gaps = 12/248 (4%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VPL+APSNFTL QV  +  A  SWNPV  +S+RG  +GYK+QTWTEKDGE  +RE+ +  
Sbjct: 808  VPLQAPSNFTLNQVKSSTSAQFSWNPVPEESVRGELKGYKIQTWTEKDGEKGMREIDIRG 867

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
            G  T   V KF+P SKN+ R+LA+NG Y+GPPSE +SF TPEGVPG V SLEA P+GSSA
Sbjct: 868  GNRTHALVTKFIPFSKNYVRILAYNGRYSGPPSETLSFDTPEGVPGVVLSLEAFPMGSSA 927

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYR 579
             +L W KP +PNG+L GY+I Y+ V  T++GPLLER P+I+D   TSAKLA L P TKYR
Sbjct: 928  LFLVWTKPAEPNGILTGYRIYYEPVNETRLGPLLERKPHITDVEATSAKLAMLAPDTKYR 987

Query: 580  IHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI 639
            IH+   TK G+G +    +++  K   +       P+  + +W A+P  + N  +   RI
Sbjct: 988  IHIRATTKIGEGND----YFIEQKTRTS-----QRPDMPLFTWEAIP--KENG-YSNVRI 1035

Query: 640  FWRRHNTG 647
             W+ +  G
Sbjct: 1036 IWQLNLNG 1043



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 168/386 (43%), Gaps = 34/386 (8%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPIN-PS--DRISQGNYGKSLI 90
           +Q +   + ++   +K   + C   G P P+  W K+G     P+  DRISQ     +L+
Sbjct: 33  EQLFQVAQAKINENDKPFLIECEAEGEPAPRYRWIKNGKNFEWPAYDDRISQQPGRGTLV 92

Query: 91  IKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECK- 148
           I      D G Y C   N  G A S S+ +       F  + P  ++A E +     C+ 
Sbjct: 93  ISRPRDEDLGQYQCFAENEWGIATSNSVFVRKAELNSFKDQNPISLDANEGQPFKLTCQP 152

Query: 149 ASGLPEPEIHW-VHNGKPISQAPPNPRRKVGP-NRITIENLRKSDTGN---YGCNATNSL 203
             G P+P ++W + +     ++  N R  + P   +   N+ ++D  +   Y C AT+  
Sbjct: 153 PDGFPKPNVYWLIQDTAGGIKSINNSRMTLDPEGNLWFSNVTRNDASDDFYYACAATSVF 212

Query: 204 GYVYK---DVYVNVLAHAPEITE----------APKDEYTVDGKTVVLTCRVFGAPKPEV 250
              YK    V +NV++     ++          + K+E  + GK + L C   G P P++
Sbjct: 213 RNEYKLGNRVLLNVISSGISASQNKHDPVKQYVSRKNEVALRGKKIELYCIYGGTPLPQI 272

Query: 251 NWIHNQKEL-TGGRYTILETG-DLKITDVAFADSGEYTCFARNKLGTAQG-SGSLTVKEH 307
            W  N + + T  R      G  L I  V F D G YTC A N +G A+  S  L V   
Sbjct: 273 VWSKNGEVIRTNDRIMQGNYGKSLIIKHVNFKDKGTYTCEASNGVGDAKSYSIHLQVMAV 332

Query: 308 THITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP---RFVQSNDY 364
            + T +PE       ++  F+C A   P  +  I W+   +PI  E+ P   R V SN  
Sbjct: 333 PYFTIEPEIINAAEDETIEFKCEADGVPVPE--IKWIHNGKPIS-EAPPNPRRKVTSN-- 387

Query: 365 SLTVTKSSELDSGQYTCRAQTELDFI 390
           S+ + K ++ D+G Y C A   L ++
Sbjct: 388 SIIIEKLTKKDTGNYGCNATNSLGYV 413


>gi|380025831|ref|XP_003696667.1| PREDICTED: LOW QUALITY PROTEIN: neuroglian-like [Apis florea]
          Length = 1251

 Score =  650 bits (1678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/758 (49%), Positives = 464/758 (61%), Gaps = 82/758 (10%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           R+EYK+GNR+LLNVI++GISASQN+H P +QYV+RK EVALR KK+EL+CI+GGTPLPQ 
Sbjct: 213 RNEYKLGNRVLLNVISSGISASQNKHDPVKQYVSRKNEVALRGKKIELYCIYGGTPLPQI 272

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +WSK+G  I  +DRI QGNYGKSLIIKHV F D+G+YTCE SNGVG+AKSYSI L V+A 
Sbjct: 273 VWSKNGEVIRTNDRIMQGNYGKSLIIKHVNFKDEGTYTCEASNGVGDAKSYSIHLQVMAV 332

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFT+EPE INAAE+ET+ F+C+A G+P PEI W+HNGKPIS+APPNPRRKV  N I IE
Sbjct: 333 PYFTIEPEIINAAEDETIEFKCEADGVPVPEIKWIHNGKPISEAPPNPRRKVTSNSIIIE 392

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
            L K DT NYGCNATNSLGYVYKDVYVNVLA  PEIT+ P D  TVDGKTV +TCRVFGA
Sbjct: 393 KLTKKDTXNYGCNATNSLGYVYKDVYVNVLALEPEITQPPTDIATVDGKTVRITCRVFGA 452

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP V WI N +ELTGGRY  L++GDL+I +V F D+G YTC A NK G  +GSG+L VK
Sbjct: 453 PKPAVKWIRNGQELTGGRYKTLDSGDLEIENVIFLDAGIYTCHASNKFGEVEGSGNLVVK 512

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           EHT ITD+PEDYEV AG +ATFRCNAV+D SL L+I WL   EPIDFE EPRF++S DYS
Sbjct: 513 EHTKITDEPEDYEVAAGSTATFRCNAVTDSSLTLTIDWLSNGEPIDFEMEPRFIRSTDYS 572

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQV-IDAKKAVVSWN 424
           L +TK++ELDSG YTC A TELD  +AQATL VQ   + P+   LI V     +A + W 
Sbjct: 573 LMITKTTELDSGTYTCVAHTELDEAKAQATLIVQ---DVPNAPKLISVTCMTTEASIHWT 629

Query: 425 PVSPQSLRGHFRGYKVQ---TWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS--KNFA- 478
           P+     R     Y +Q   T+T    E       ++K +   TE    VP S   N+  
Sbjct: 630 PMGDN--RAPILRYTIQHNTTFTPDTWE-------ISKDDVPATEQTYIVPMSPWTNYTF 680

Query: 479 RVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKW-VKPE-QPN 531
           RVLA+N      PS      T     P   P  V      P       + W V P+ + N
Sbjct: 681 RVLAWNKIGTSLPSPHSDVCTTLQDVPYKNPDNVMGKGTTP---QNLVISWTVMPQIEHN 737

Query: 532 GVLMGYKIKY-QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGD 590
                Y++ Y + + G K       +  I+D    S  +       +Y+I +    + G+
Sbjct: 738 APKFMYRVYYRRDIPGEKW-----TIEDITDWKKNSLVVDNQPTYQRYKIKVVAINEKGE 792

Query: 591 G--AESKYLFY----VPFKNPDNVE-GRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
              A  + + Y    VP + P N    +  +  +   SW ++PE         Y+I    
Sbjct: 793 CRVAPEEVIGYSGEDVPLQAPSNFTLNQVKSSTSAQFSWNSVPEESVRGELKGYKI---- 848

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTT 703
                                               QTWTEKDGE  +RE+ +  G  T 
Sbjct: 849 ------------------------------------QTWTEKDGEKGMREIDIRGGNRTH 872

Query: 704 TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
             V KF+P SKN+ R+LA+NG Y+GPPSE +SF TPEG
Sbjct: 873 ALVTKFIPFSKNYVRILAYNGRYSGPPSETLSFDTPEG 910



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 122/248 (49%), Positives = 163/248 (65%), Gaps = 12/248 (4%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VPL+APSNFTL QV  +  A  SWN V  +S+RG  +GYK+QTWTEKDGE  +RE+ +  
Sbjct: 808  VPLQAPSNFTLNQVKSSTSAQFSWNSVPEESVRGELKGYKIQTWTEKDGEKGMREIDIRG 867

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
            G  T   V KF+P SKN+ R+LA+NG Y+GPPSE +SF TPEG+PG V SLEA P+GSSA
Sbjct: 868  GNRTHALVTKFIPFSKNYVRILAYNGRYSGPPSETLSFDTPEGIPGVVLSLEAFPMGSSA 927

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYR 579
             +L W KP +PNG+L GY+I Y+ V  T++GPLLER P+I+D   TSAKLA L P TKYR
Sbjct: 928  LFLVWTKPAEPNGILTGYRIYYEPVNETRLGPLLERKPHITDVEATSAKLAMLAPDTKYR 987

Query: 580  IHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI 639
            IH+   TK G+G +    +++  K   +       P+  + +W A+P+      +   RI
Sbjct: 988  IHIRATTKIGEGND----YFIEQKTRTS-----QRPDVPLFTWEAIPK---ENGYSNVRI 1035

Query: 640  FWRRHNTG 647
             W+ +  G
Sbjct: 1036 IWQLNLNG 1043



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 167/386 (43%), Gaps = 34/386 (8%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPIN-PS--DRISQGNYGKSLI 90
           +Q +   + ++   +K   + C   G P P+  W K+G     P+  DRISQ     +L+
Sbjct: 33  EQLFQVAQAKINENDKPFLIECEAEGEPAPRYRWIKNGKNFEWPAYDDRISQQPGRGTLV 92

Query: 91  IKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECK- 148
           I      D G Y C   N  G A S S+ +       F  + P  ++A E +     C+ 
Sbjct: 93  ISRPRDEDLGQYQCFAENEWGIATSNSVFVRKAELNSFKDQNPISLDANEGQPFKLTCQP 152

Query: 149 ASGLPEPEIHW-VHNGKPISQAPPNPRRKVGP-NRITIENLRKSDTGN---YGCNATNSL 203
             G P+P ++W + +     ++  N R  + P   +   N+ ++D  +   Y C AT+  
Sbjct: 153 PDGFPKPNVYWLIQDTAGGIKSINNSRMTLDPEGNLWFSNVTRNDASDDFYYACAATSVF 212

Query: 204 GYVYK---DVYVNVLAHAPEITE----------APKDEYTVDGKTVVLTCRVFGAPKPEV 250
              YK    V +NV++     ++          + K+E  + GK + L C   G P P++
Sbjct: 213 RNEYKLGNRVLLNVISSGISASQNKHDPVKQYVSRKNEVALRGKKIELYCIYGGTPLPQI 272

Query: 251 NWIHNQKEL-TGGRYTILETG-DLKITDVAFADSGEYTCFARNKLGTAQG-SGSLTVKEH 307
            W  N + + T  R      G  L I  V F D G YTC A N +G A+  S  L V   
Sbjct: 273 VWSKNGEVIRTNDRIMQGNYGKSLIIKHVNFKDEGTYTCEASNGVGDAKSYSIHLQVMAV 332

Query: 308 THITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP---RFVQSNDY 364
            + T +PE       ++  F+C A   P  +  I W+   +PI  E+ P   R V SN  
Sbjct: 333 PYFTIEPEIINAAEDETIEFKCEADGVPVPE--IKWIHNGKPIS-EAPPNPRRKVTSN-- 387

Query: 365 SLTVTKSSELDSGQYTCRAQTELDFI 390
           S+ + K ++ D+  Y C A   L ++
Sbjct: 388 SIIIEKLTKKDTXNYGCNATNSLGYV 413


>gi|345498258|ref|XP_003428190.1| PREDICTED: neuroglian-like isoform 2 [Nasonia vitripennis]
          Length = 1248

 Score =  637 bits (1643), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 367/756 (48%), Positives = 466/756 (61%), Gaps = 77/756 (10%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           R+EYK+GNR+LLNVI+TG +AS N+  P +QYV+RK EVALR KK+ELFCIFGGTPLP T
Sbjct: 213 RNEYKLGNRVLLNVISTGSTASSNKREPVKQYVSRKNEVALRGKKIELFCIFGGTPLPLT 272

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +WSK+G  I P+DR+++GNYGKSLIIKHV F D+G+YTC+VSNGVG A+SYSI+L VL+ 
Sbjct: 273 VWSKNGQRIRPNDRVTEGNYGKSLIIKHVNFDDEGTYTCDVSNGVGSAQSYSINLEVLSV 332

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFTVEPE +NAAE+ETV F+C+A+G+P+PEI W+HNGKPIS+AP NPRRKV PN I IE
Sbjct: 333 PYFTVEPEIVNAAEDETVEFKCEATGVPKPEIKWIHNGKPISEAPFNPRRKVTPNSIIIE 392

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
            L K+DTGNYGCNATNSLGYVYKDVYVNVLA  PEI + P DE TVDGKT+ LTCRVFGA
Sbjct: 393 KLLKNDTGNYGCNATNSLGYVYKDVYVNVLALEPEILQPPMDESTVDGKTIRLTCRVFGA 452

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKPEV W+ N +ELTGGRY ILE+GDL+I +V F+D+GEY C A NK G    +G L VK
Sbjct: 453 PKPEVKWVRNGQELTGGRYKILESGDLEIENVIFSDAGEYNCHASNKFGKVNATGFLAVK 512

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           EHT ITD PEDYEV AG +ATFRCNAV+D +L+L I WL   EPIDFE+EPRF++S DYS
Sbjct: 513 EHTRITDVPEDYEVAAGATATFRCNAVTDSTLELHIDWLSKGEPIDFEAEPRFIRSTDYS 572

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQV-IDAKKAVVSWN 424
           L +TK++ELDSG YTC A+T+LD   AQATL VQ   + P++ TL+ V   + +A VSW 
Sbjct: 573 LMITKTTELDSGTYTCVARTDLDEARAQATLIVQ---DVPNSPTLLGVSCTSNQAFVSWT 629

Query: 425 PVSPQSLRGHFRGYKVQ---TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 481
           P+     R     Y +Q   ++T    E +   +   +         +  P +    RV+
Sbjct: 630 PMGDN--RSPILRYAIQYNTSFTPDTWEYAKDHVPATEQRYAV----QMSPWANYTFRVI 683

Query: 482 AFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKW-VKPEQPNGVLM 535
           A+N      PS+     T     P   P  V      P       + W V P+  +    
Sbjct: 684 AYNKIGPSQPSQHSHVCTTLPDVPYNNPDNVMGRGDDP---QNLVISWTVMPQIEHNAP- 739

Query: 536 GYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE-- 593
             K KYQ      +     R+  I++    +  +       KY+I +    + G+  E  
Sbjct: 740 --KFKYQVYYKRDIPGEDWRIEEITNWKQNTLVINNQPTYQKYKIKVGALNEKGECREPP 797

Query: 594 SKYLFY----VPFKNPDN---VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
            + + Y    VP  +P N   VE R ST    ++SWT + E         Y+I       
Sbjct: 798 QEVIGYSGEDVPTASPGNFTLVEVRSST--TALLSWTPVAEETVKGELRGYKI------- 848

Query: 647 GEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE-GSIRELIVNKGESTTTE 705
            E W                                T+KDGE  + RE  V  G  T   
Sbjct: 849 -ETW--------------------------------TDKDGEPNNPREHNVKGGNKTYAL 875

Query: 706 VDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
           V KF+P SKNF R+ A+NG +NGPPSE++SF TPEG
Sbjct: 876 VTKFIPFSKNFVRIRAYNGRFNGPPSEVLSFETPEG 911



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 115/251 (45%), Positives = 156/251 (62%), Gaps = 13/251 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE-GSIRELIVN 458
            VP  +P NFTL++V  +  A++SW PV+ ++++G  RGYK++TWT+KDGE  + RE  V 
Sbjct: 808  VPTASPGNFTLVEVRSSTTALLSWTPVAEETVKGELRGYKIETWTDKDGEPNNPREHNVK 867

Query: 459  KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSS 518
             G  T   V KF+P SKNF R+ A+NG +NGPPSE++SF TPEGVPGTV  LEA P+GS+
Sbjct: 868  GGNKTYALVTKFIPFSKNFVRIRAYNGRFNGPPSEVLSFETPEGVPGTVMGLEAYPVGST 927

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  LKW KP + NG+L GY+I +Q V G+K+G  +ER P I+DP  TSAKLA L P  KY
Sbjct: 928  SMLLKWKKPIEINGILTGYRISFQQVNGSKIGNEMERHPQITDPEATSAKLASLMPEAKY 987

Query: 579  RIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
            RI +   T AG G      F+V  + P +       P+    SW  +P+    +     R
Sbjct: 988  RISVRATTGAGPGEP----FFVEKRTPAS-----RRPDKPTFSWINIPK---ESGLSNVR 1035

Query: 639  IFWRRHNTGEA 649
            I W +   G A
Sbjct: 1036 ITWEQKTDGFA 1046



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 150/367 (40%), Gaps = 38/367 (10%)

Query: 55  CIFGGTPLPQTIWSKDGVPIN---PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVG 111
           C   G P P   W K+G         DRISQ     +L+I      D G Y C   N  G
Sbjct: 54  CEAEGEPAPLYEWIKNGKDFKWQAYDDRISQQPGRGTLVISKPRDEDLGQYQCFAKNEWG 113

Query: 112 EAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECK-ASGLPEPEIHW-VHNGKPISQ 168
            A S S+ +       F  + P  ++ +E +     C+   G P+P ++W + +     +
Sbjct: 114 IATSNSVFVRKAELNSFKDQNPVTLSVSEGDPYKLTCQPPDGWPKPNVYWLIQDHAGTIK 173

Query: 169 APPNPRRKVGP-NRITIENLRKSDTGN---YGCNATNSLGYVYK---DVYVNVLAHAPEI 221
           +  N R  + P   +   N+ K D  +   Y C AT+     YK    V +NV++     
Sbjct: 174 SINNSRMTLDPEGNLWFSNVTKLDASDDYYYACAATSLFRNEYKLGNRVLLNVISTGSTA 233

Query: 222 TE----------APKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN-QKELTGGRYTILETG 270
           +           + K+E  + GK + L C   G P P   W  N Q+     R T    G
Sbjct: 234 SSNKREPVKQYVSRKNEVALRGKKIELFCIFGGTPLPLTVWSKNGQRIRPNDRVTEGNYG 293

Query: 271 -DLKITDVAFADSGEYTCFARNKLGTAQG-SGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
             L I  V F D G YTC   N +G+AQ  S +L V    + T +PE       ++  F+
Sbjct: 294 KSLIIKHVNFDDEGTYTCDVSNGVGSAQSYSINLEVLSVPYFTVEPEIVNAAEDETVEFK 353

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRA 383
           C A   P  K  I W+   +PI   SE  F     V  N  S+ + K  + D+G Y C A
Sbjct: 354 CEATGVP--KPEIKWIHNGKPI---SEAPFNPRRKVTPN--SIIIEKLLKNDTGNYGCNA 406

Query: 384 QTELDFI 390
              L ++
Sbjct: 407 TNSLGYV 413



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 97/265 (36%), Gaps = 23/265 (8%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR--ITIENLRKSDTGNYGC 197
           E+    EC+A G P P   W+ NGK       + R    P R  + I   R  D G Y C
Sbjct: 47  EKPFLVECEAEGEPAPLYEWIKNGKDFKWQAYDDRISQQPGRGTLVISKPRDEDLGQYQC 106

Query: 198 NATNSLGYVYKD-VYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR-VFGAPKPEVNWIHN 255
            A N  G    + V+V          + P      +G    LTC+   G PKP V W+  
Sbjct: 107 FAKNEWGIATSNSVFVRKAELNSFKDQNPVTLSVSEGDPYKLTCQPPDGWPKPNVYWLIQ 166

Query: 256 Q-----KELTGGRYTILETGDLKITDVAFADSGE---YTCFARNKLGTAQGSGSLTVKEH 307
                 K +   R T+   G+L  ++V   D+ +   Y C A +        G+  +   
Sbjct: 167 DHAGTIKSINNSRMTLDPEGNLWFSNVTKLDASDDYYYACAATSLFRNEYKLGNRVLLNV 226

Query: 308 THITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID---FESEPRFVQSNDY 364
                     + E  +    R N V+    K+ +  + G  P+    +    + ++ ND 
Sbjct: 227 ISTGSTASSNKREPVKQYVSRKNEVALRGKKIELFCIFGGTPLPLTVWSKNGQRIRPNDR 286

Query: 365 --------SLTVTKSSELDSGQYTC 381
                   SL +   +  D G YTC
Sbjct: 287 VTEGNYGKSLIIKHVNFDDEGTYTC 311


>gi|156546343|ref|XP_001606583.1| PREDICTED: neuroglian-like isoform 1 [Nasonia vitripennis]
          Length = 1254

 Score =  637 bits (1642), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 367/756 (48%), Positives = 466/756 (61%), Gaps = 77/756 (10%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           R+EYK+GNR+LLNVI+TG +AS N+  P +QYV+RK EVALR KK+ELFCIFGGTPLP T
Sbjct: 213 RNEYKLGNRVLLNVISTGSTASSNKREPVKQYVSRKNEVALRGKKIELFCIFGGTPLPLT 272

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +WSK+G  I P+DR+++GNYGKSLIIKHV F D+G+YTC+VSNGVG A+SYSI+L VL+ 
Sbjct: 273 VWSKNGQRIRPNDRVTEGNYGKSLIIKHVNFDDEGTYTCDVSNGVGSAQSYSINLEVLSV 332

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFTVEPE +NAAE+ETV F+C+A+G+P+PEI W+HNGKPIS+AP NPRRKV PN I IE
Sbjct: 333 PYFTVEPEIVNAAEDETVEFKCEATGVPKPEIKWIHNGKPISEAPFNPRRKVTPNSIIIE 392

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
            L K+DTGNYGCNATNSLGYVYKDVYVNVLA  PEI + P DE TVDGKT+ LTCRVFGA
Sbjct: 393 KLLKNDTGNYGCNATNSLGYVYKDVYVNVLALEPEILQPPMDESTVDGKTIRLTCRVFGA 452

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKPEV W+ N +ELTGGRY ILE+GDL+I +V F+D+GEY C A NK G    +G L VK
Sbjct: 453 PKPEVKWVRNGQELTGGRYKILESGDLEIENVIFSDAGEYNCHASNKFGKVNATGFLAVK 512

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           EHT ITD PEDYEV AG +ATFRCNAV+D +L+L I WL   EPIDFE+EPRF++S DYS
Sbjct: 513 EHTRITDVPEDYEVAAGATATFRCNAVTDSTLELHIDWLSKGEPIDFEAEPRFIRSTDYS 572

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQV-IDAKKAVVSWN 424
           L +TK++ELDSG YTC A+T+LD   AQATL VQ   + P++ TL+ V   + +A VSW 
Sbjct: 573 LMITKTTELDSGTYTCVARTDLDEARAQATLIVQ---DVPNSPTLLGVSCTSNQAFVSWT 629

Query: 425 PVSPQSLRGHFRGYKVQ---TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 481
           P+     R     Y +Q   ++T    E +   +   +         +  P +    RV+
Sbjct: 630 PMGDN--RSPILRYAIQYNTSFTPDTWEYAKDHVPATEQRYAV----QMSPWANYTFRVI 683

Query: 482 AFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKW-VKPEQPNGVLM 535
           A+N      PS+     T     P   P  V      P       + W V P+  +    
Sbjct: 684 AYNKIGPSQPSQHSHVCTTLPDVPYNNPDNVMGRGDDP---QNLVISWTVMPQIEHNAP- 739

Query: 536 GYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE-- 593
             K KYQ      +     R+  I++    +  +       KY+I +    + G+  E  
Sbjct: 740 --KFKYQVYYKRDIPGEDWRIEEITNWKQNTLVINNQPTYQKYKIKVGALNEKGECREPP 797

Query: 594 SKYLFY----VPFKNPDN---VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
            + + Y    VP  +P N   VE R ST    ++SWT + E         Y+I       
Sbjct: 798 QEVIGYSGEDVPTASPGNFTLVEVRSST--TALLSWTPVAEETVKGELRGYKI------- 848

Query: 647 GEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE-GSIRELIVNKGESTTTE 705
            E W                                T+KDGE  + RE  V  G  T   
Sbjct: 849 -ETW--------------------------------TDKDGEPNNPREHNVKGGNKTYAL 875

Query: 706 VDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
           V KF+P SKNF R+ A+NG +NGPPSE++SF TPEG
Sbjct: 876 VTKFIPFSKNFVRIRAYNGRFNGPPSEVLSFETPEG 911



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 115/251 (45%), Positives = 156/251 (62%), Gaps = 13/251 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE-GSIRELIVN 458
            VP  +P NFTL++V  +  A++SW PV+ ++++G  RGYK++TWT+KDGE  + RE  V 
Sbjct: 808  VPTASPGNFTLVEVRSSTTALLSWTPVAEETVKGELRGYKIETWTDKDGEPNNPREHNVK 867

Query: 459  KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSS 518
             G  T   V KF+P SKNF R+ A+NG +NGPPSE++SF TPEGVPGTV  LEA P+GS+
Sbjct: 868  GGNKTYALVTKFIPFSKNFVRIRAYNGRFNGPPSEVLSFETPEGVPGTVMGLEAYPVGST 927

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  LKW KP + NG+L GY+I +Q V G+K+G  +ER P I+DP  TSAKLA L P  KY
Sbjct: 928  SMLLKWKKPIEINGILTGYRISFQQVNGSKIGNEMERHPQITDPEATSAKLASLMPEAKY 987

Query: 579  RIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
            RI +   T AG G      F+V  + P +       P+    SW  +P+    +     R
Sbjct: 988  RISVRATTGAGPGEP----FFVEKRTPAS-----RRPDKPTFSWINIPK---ESGLSNVR 1035

Query: 639  IFWRRHNTGEA 649
            I W +   G A
Sbjct: 1036 ITWEQKTDGFA 1046



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 150/367 (40%), Gaps = 38/367 (10%)

Query: 55  CIFGGTPLPQTIWSKDGVPIN---PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVG 111
           C   G P P   W K+G         DRISQ     +L+I      D G Y C   N  G
Sbjct: 54  CEAEGEPAPLYEWIKNGKDFKWQAYDDRISQQPGRGTLVISKPRDEDLGQYQCFAKNEWG 113

Query: 112 EAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECK-ASGLPEPEIHW-VHNGKPISQ 168
            A S S+ +       F  + P  ++ +E +     C+   G P+P ++W + +     +
Sbjct: 114 IATSNSVFVRKAELNSFKDQNPVTLSVSEGDPYKLTCQPPDGWPKPNVYWLIQDHAGTIK 173

Query: 169 APPNPRRKVGP-NRITIENLRKSDTGN---YGCNATNSLGYVYK---DVYVNVLAHAPEI 221
           +  N R  + P   +   N+ K D  +   Y C AT+     YK    V +NV++     
Sbjct: 174 SINNSRMTLDPEGNLWFSNVTKLDASDDYYYACAATSLFRNEYKLGNRVLLNVISTGSTA 233

Query: 222 TE----------APKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN-QKELTGGRYTILETG 270
           +           + K+E  + GK + L C   G P P   W  N Q+     R T    G
Sbjct: 234 SSNKREPVKQYVSRKNEVALRGKKIELFCIFGGTPLPLTVWSKNGQRIRPNDRVTEGNYG 293

Query: 271 -DLKITDVAFADSGEYTCFARNKLGTAQG-SGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
             L I  V F D G YTC   N +G+AQ  S +L V    + T +PE       ++  F+
Sbjct: 294 KSLIIKHVNFDDEGTYTCDVSNGVGSAQSYSINLEVLSVPYFTVEPEIVNAAEDETVEFK 353

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRA 383
           C A   P  K  I W+   +PI   SE  F     V  N  S+ + K  + D+G Y C A
Sbjct: 354 CEATGVP--KPEIKWIHNGKPI---SEAPFNPRRKVTPN--SIIIEKLLKNDTGNYGCNA 406

Query: 384 QTELDFI 390
              L ++
Sbjct: 407 TNSLGYV 413



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 96/265 (36%), Gaps = 23/265 (8%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR--ITIENLRKSDTGNYGC 197
           E+    EC+A G P P   W+ NGK       + R    P R  + I   R  D G Y C
Sbjct: 47  EKPFLVECEAEGEPAPLYEWIKNGKDFKWQAYDDRISQQPGRGTLVISKPRDEDLGQYQC 106

Query: 198 NATNSLGYVYKD-VYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR-VFGAPKPEVNWIHN 255
            A N  G    + V+V          + P      +G    LTC+   G PKP V W+  
Sbjct: 107 FAKNEWGIATSNSVFVRKAELNSFKDQNPVTLSVSEGDPYKLTCQPPDGWPKPNVYWLIQ 166

Query: 256 Q-----KELTGGRYTILETGDLKITDVAFADSGE---YTCFARNKLGTAQGSGSLTVKEH 307
                 K +   R T+   G+L  ++V   D+ +   Y C A +        G+  +   
Sbjct: 167 DHAGTIKSINNSRMTLDPEGNLWFSNVTKLDASDDYYYACAATSLFRNEYKLGNRVLLNV 226

Query: 308 THITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDF---ESEPRFVQSNDY 364
                     + E  +    R N V+    K+ +  + G  P+         + ++ ND 
Sbjct: 227 ISTGSTASSNKREPVKQYVSRKNEVALRGKKIELFCIFGGTPLPLTVWSKNGQRIRPNDR 286

Query: 365 --------SLTVTKSSELDSGQYTC 381
                   SL +   +  D G YTC
Sbjct: 287 VTEGNYGKSLIIKHVNFDDEGTYTC 311


>gi|350399166|ref|XP_003485439.1| PREDICTED: neuroglian-like isoform 2 [Bombus impatiens]
          Length = 1247

 Score =  624 bits (1610), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 366/765 (47%), Positives = 460/765 (60%), Gaps = 96/765 (12%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           R+EYK+GNR+LLNVI++GISASQN++ P +QYV+RK EVALR KK+EL+CI GGTPLPQ 
Sbjct: 213 RNEYKLGNRVLLNVISSGISASQNKYEPVKQYVSRKNEVALRGKKIELYCIHGGTPLPQI 272

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +WSK+G  I  +DRI QGNYGKSLIIKHV   D+G+YTCE SNGVG+AKSYSI L V+A 
Sbjct: 273 VWSKNGEVIKTNDRIMQGNYGKSLIIKHVNSKDEGTYTCEASNGVGDAKSYSIHLQVMAV 332

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFT+EPE INAAE+ETV F+C A+G+P PEI W+HNGKPIS+APPNPRRKV PN I IE
Sbjct: 333 PYFTIEPEIINAAEDETVEFKCAANGVPVPEIKWIHNGKPISEAPPNPRRKVTPNSIIIE 392

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
            L K DTGNYGCNATNSLGYVYKDVYVNVLA  PEIT+ P D  TVDGK V +TCRVFGA
Sbjct: 393 KLTKKDTGNYGCNATNSLGYVYKDVYVNVLALEPEITQPPADIATVDGKIVRITCRVFGA 452

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP V WI N +ELTGGRY  L++GDL+I +V F D+G YTC A NK G  + SG+L VK
Sbjct: 453 PKPAVKWIRNGQELTGGRYKTLDSGDLEIENVIFLDAGTYTCHASNKFGEIEASGNLAVK 512

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           EHT ITD+PEDYEV AG +ATFRCNAV+D SL L+I WL   EPIDFE EPRF++S DYS
Sbjct: 513 EHTRITDEPEDYEVAAGSTATFRCNAVTDSSLTLTIDWLSNGEPIDFEMEPRFIRSTDYS 572

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQV-IDAKKAVVSWN 424
           L +TK++ELD+G YTC A TELD  +AQATL VQ   + P+   L+ V      A + W 
Sbjct: 573 LMITKTTELDTGTYTCVAHTELDEAKAQATLVVQ---DVPNPPKLVSVNCAGTTATIHWT 629

Query: 425 PVSPQSLRGHFRGYKVQ---TWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS--KNFA- 478
           P+     R     Y +Q   ++T    E       ++K    +TE    VP S   N+  
Sbjct: 630 PMGDN--RAPILRYTIQHNTSFTPDTWE-------ISKDPVPSTEQTYDVPMSPWANYTF 680

Query: 479 RVLAFNGAYNGPPS---------EIISFVTPEGVPG---TVQSLEAIPLGSSAFYLKW-V 525
           RVLA+N      PS         + + F  P+ V G   T Q+L           + W V
Sbjct: 681 RVLAWNKIGPSLPSPHSDVCTTLQDVPFTNPDNVMGKGTTPQNL----------VISWTV 730

Query: 526 KPE-QPNGVLMGYKIKY-QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            P+ + N     Y++ Y + + G K       +  I D    S  +       +Y+I + 
Sbjct: 731 MPQIEHNAPKFMYRVYYRRDIPGEKW-----TIEDIHDWKKNSLVVDNQPTYQRYKIKVV 785

Query: 584 GYTKAGDG--AESKYLFY----VPFKNPDNVE-GRGSTPNNLVISWTAMPEIEHNAPHFK 636
              + G+   A  +   Y    VP + P N    +  +  +   SW  +PE         
Sbjct: 786 AINERGECRVAPEEVTGYSGEDVPLQAPSNFTLNQVKSSTSAQFSWNPVPEESVRGELQG 845

Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIV 696
           Y+I        + W + D                                GE  +RE+ +
Sbjct: 846 YKI--------QTWTEKD--------------------------------GEKGMREIDI 865

Query: 697 NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
             G  T   V KFVP +KN+ R+LA+NG Y GPPSE +SF TPEG
Sbjct: 866 RGGNRTHALVTKFVPFNKNYVRILAYNGRYAGPPSETLSFDTPEG 910



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 116/192 (60%), Positives = 144/192 (75%)

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
           VPL+APSNFTL QV  +  A  SWNPV  +S+RG  +GYK+QTWTEKDGE  +RE+ +  
Sbjct: 808 VPLQAPSNFTLNQVKSSTSAQFSWNPVPEESVRGELQGYKIQTWTEKDGEKGMREIDIRG 867

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
           G  T   V KFVP +KN+ R+LA+NG Y GPPSE +SF TPEGVPGTV +LEA P+GSSA
Sbjct: 868 GNRTHALVTKFVPFNKNYVRILAYNGRYAGPPSETLSFDTPEGVPGTVLNLEAFPMGSSA 927

Query: 520 FYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYR 579
            +L W KP +PNG+L GY+I Y+SV GT++GPLLER P+I+DP  TSAKLA L P  KYR
Sbjct: 928 LFLAWTKPAEPNGILTGYRIYYESVNGTRLGPLLERKPHITDPEATSAKLAALAPDMKYR 987

Query: 580 IHLAGYTKAGDG 591
           +H+   TK G+G
Sbjct: 988 VHVRATTKVGEG 999



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 167/388 (43%), Gaps = 38/388 (9%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPIN-PS--DRISQGNYGKSLI 90
           +Q +   + ++   +K   + C   G P P+  W K+G     P+  DRISQ     +L+
Sbjct: 33  EQLFQVAQAKINENDKPFLIECEAEGEPAPRYRWIKNGKNFEWPAYDDRISQQPGRGTLV 92

Query: 91  IKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECK- 148
           I      D G Y C   N  G A S S+ +       F  + P  ++A E +     C+ 
Sbjct: 93  ISRPRDEDLGQYQCFAENEWGIATSNSVFVRKAELNSFKDQNPISLDANEGQPFKLTCQP 152

Query: 149 ASGLPEPEIHW-VHNGKPISQAPPNPRRKVGP-NRITIENLRKSDTGN---YGCNATNSL 203
             G P+P ++W + +     ++  N R  + P   +   N+ ++D  +   Y C AT+  
Sbjct: 153 PDGWPKPNVYWLIQDTAGGIKSINNSRMTLDPEGNLWFSNVTRNDASDDFYYACAATSVF 212

Query: 204 GYVYK---DVYVNVLAHAPEITE----------APKDEYTVDGKTVVLTCRVFGAPKPEV 250
              YK    V +NV++     ++          + K+E  + GK + L C   G P P++
Sbjct: 213 RNEYKLGNRVLLNVISSGISASQNKYEPVKQYVSRKNEVALRGKKIELYCIHGGTPLPQI 272

Query: 251 NWIHNQKEL-TGGRYTILETG-DLKITDVAFADSGEYTCFARNKLGTAQG-SGSLTVKEH 307
            W  N + + T  R      G  L I  V   D G YTC A N +G A+  S  L V   
Sbjct: 273 VWSKNGEVIKTNDRIMQGNYGKSLIIKHVNSKDEGTYTCEASNGVGDAKSYSIHLQVMAV 332

Query: 308 THITDQPEDYEVEAGQSATFRC--NAVSDPSLKLSIVWLRGSEPIDFESEP---RFVQSN 362
            + T +PE       ++  F+C  N V  P +K    W+   +PI  E+ P   R V  N
Sbjct: 333 PYFTIEPEIINAAEDETVEFKCAANGVPVPEIK----WIHNGKPIS-EAPPNPRRKVTPN 387

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFI 390
             S+ + K ++ D+G Y C A   L ++
Sbjct: 388 --SIIIEKLTKKDTGNYGCNATNSLGYV 413


>gi|350399162|ref|XP_003485438.1| PREDICTED: neuroglian-like isoform 1 [Bombus impatiens]
          Length = 1251

 Score =  624 bits (1609), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 366/765 (47%), Positives = 460/765 (60%), Gaps = 96/765 (12%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           R+EYK+GNR+LLNVI++GISASQN++ P +QYV+RK EVALR KK+EL+CI GGTPLPQ 
Sbjct: 213 RNEYKLGNRVLLNVISSGISASQNKYEPVKQYVSRKNEVALRGKKIELYCIHGGTPLPQI 272

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +WSK+G  I  +DRI QGNYGKSLIIKHV   D+G+YTCE SNGVG+AKSYSI L V+A 
Sbjct: 273 VWSKNGEVIKTNDRIMQGNYGKSLIIKHVNSKDEGTYTCEASNGVGDAKSYSIHLQVMAV 332

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFT+EPE INAAE+ETV F+C A+G+P PEI W+HNGKPIS+APPNPRRKV PN I IE
Sbjct: 333 PYFTIEPEIINAAEDETVEFKCAANGVPVPEIKWIHNGKPISEAPPNPRRKVTPNSIIIE 392

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
            L K DTGNYGCNATNSLGYVYKDVYVNVLA  PEIT+ P D  TVDGK V +TCRVFGA
Sbjct: 393 KLTKKDTGNYGCNATNSLGYVYKDVYVNVLALEPEITQPPADIATVDGKIVRITCRVFGA 452

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP V WI N +ELTGGRY  L++GDL+I +V F D+G YTC A NK G  + SG+L VK
Sbjct: 453 PKPAVKWIRNGQELTGGRYKTLDSGDLEIENVIFLDAGTYTCHASNKFGEIEASGNLAVK 512

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           EHT ITD+PEDYEV AG +ATFRCNAV+D SL L+I WL   EPIDFE EPRF++S DYS
Sbjct: 513 EHTRITDEPEDYEVAAGSTATFRCNAVTDSSLTLTIDWLSNGEPIDFEMEPRFIRSTDYS 572

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQV-IDAKKAVVSWN 424
           L +TK++ELD+G YTC A TELD  +AQATL VQ   + P+   L+ V      A + W 
Sbjct: 573 LMITKTTELDTGTYTCVAHTELDEAKAQATLVVQ---DVPNPPKLVSVNCAGTTATIHWT 629

Query: 425 PVSPQSLRGHFRGYKVQ---TWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS--KNFA- 478
           P+     R     Y +Q   ++T    E       ++K    +TE    VP S   N+  
Sbjct: 630 PMGDN--RAPILRYTIQHNTSFTPDTWE-------ISKDPVPSTEQTYDVPMSPWANYTF 680

Query: 479 RVLAFNGAYNGPPS---------EIISFVTPEGVPG---TVQSLEAIPLGSSAFYLKW-V 525
           RVLA+N      PS         + + F  P+ V G   T Q+L           + W V
Sbjct: 681 RVLAWNKIGPSLPSPHSDVCTTLQDVPFTNPDNVMGKGTTPQNL----------VISWTV 730

Query: 526 KPE-QPNGVLMGYKIKY-QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            P+ + N     Y++ Y + + G K       +  I D    S  +       +Y+I + 
Sbjct: 731 MPQIEHNAPKFMYRVYYRRDIPGEKW-----TIEDIHDWKKNSLVVDNQPTYQRYKIKVV 785

Query: 584 GYTKAGDG--AESKYLFY----VPFKNPDNVE-GRGSTPNNLVISWTAMPEIEHNAPHFK 636
              + G+   A  +   Y    VP + P N    +  +  +   SW  +PE         
Sbjct: 786 AINERGECRVAPEEVTGYSGEDVPLQAPSNFTLNQVKSSTSAQFSWNPVPEESVRGELQG 845

Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIV 696
           Y+I        + W + D                                GE  +RE+ +
Sbjct: 846 YKI--------QTWTEKD--------------------------------GEKGMREIDI 865

Query: 697 NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
             G  T   V KFVP +KN+ R+LA+NG Y GPPSE +SF TPEG
Sbjct: 866 RGGNRTHALVTKFVPFNKNYVRILAYNGRYAGPPSETLSFDTPEG 910



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 116/192 (60%), Positives = 144/192 (75%)

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
           VPL+APSNFTL QV  +  A  SWNPV  +S+RG  +GYK+QTWTEKDGE  +RE+ +  
Sbjct: 808 VPLQAPSNFTLNQVKSSTSAQFSWNPVPEESVRGELQGYKIQTWTEKDGEKGMREIDIRG 867

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
           G  T   V KFVP +KN+ R+LA+NG Y GPPSE +SF TPEGVPGTV +LEA P+GSSA
Sbjct: 868 GNRTHALVTKFVPFNKNYVRILAYNGRYAGPPSETLSFDTPEGVPGTVLNLEAFPMGSSA 927

Query: 520 FYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYR 579
            +L W KP +PNG+L GY+I Y+SV GT++GPLLER P+I+DP  TSAKLA L P  KYR
Sbjct: 928 LFLAWTKPAEPNGILTGYRIYYESVNGTRLGPLLERKPHITDPEATSAKLAALAPDMKYR 987

Query: 580 IHLAGYTKAGDG 591
           +H+   TK G+G
Sbjct: 988 VHVRATTKVGEG 999



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 167/388 (43%), Gaps = 38/388 (9%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPIN-PS--DRISQGNYGKSLI 90
           +Q +   + ++   +K   + C   G P P+  W K+G     P+  DRISQ     +L+
Sbjct: 33  EQLFQVAQAKINENDKPFLIECEAEGEPAPRYRWIKNGKNFEWPAYDDRISQQPGRGTLV 92

Query: 91  IKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECK- 148
           I      D G Y C   N  G A S S+ +       F  + P  ++A E +     C+ 
Sbjct: 93  ISRPRDEDLGQYQCFAENEWGIATSNSVFVRKAELNSFKDQNPISLDANEGQPFKLTCQP 152

Query: 149 ASGLPEPEIHW-VHNGKPISQAPPNPRRKVGP-NRITIENLRKSDTGN---YGCNATNSL 203
             G P+P ++W + +     ++  N R  + P   +   N+ ++D  +   Y C AT+  
Sbjct: 153 PDGWPKPNVYWLIQDTAGGIKSINNSRMTLDPEGNLWFSNVTRNDASDDFYYACAATSVF 212

Query: 204 GYVYK---DVYVNVLAHAPEITE----------APKDEYTVDGKTVVLTCRVFGAPKPEV 250
              YK    V +NV++     ++          + K+E  + GK + L C   G P P++
Sbjct: 213 RNEYKLGNRVLLNVISSGISASQNKYEPVKQYVSRKNEVALRGKKIELYCIHGGTPLPQI 272

Query: 251 NWIHNQKEL-TGGRYTILETG-DLKITDVAFADSGEYTCFARNKLGTAQG-SGSLTVKEH 307
            W  N + + T  R      G  L I  V   D G YTC A N +G A+  S  L V   
Sbjct: 273 VWSKNGEVIKTNDRIMQGNYGKSLIIKHVNSKDEGTYTCEASNGVGDAKSYSIHLQVMAV 332

Query: 308 THITDQPEDYEVEAGQSATFRC--NAVSDPSLKLSIVWLRGSEPIDFESEP---RFVQSN 362
            + T +PE       ++  F+C  N V  P +K    W+   +PI  E+ P   R V  N
Sbjct: 333 PYFTIEPEIINAAEDETVEFKCAANGVPVPEIK----WIHNGKPIS-EAPPNPRRKVTPN 387

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFI 390
             S+ + K ++ D+G Y C A   L ++
Sbjct: 388 --SIIIEKLTKKDTGNYGCNATNSLGYV 413


>gi|340714433|ref|XP_003395733.1| PREDICTED: LOW QUALITY PROTEIN: neuroglian-like [Bombus terrestris]
          Length = 1251

 Score =  618 bits (1594), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 364/765 (47%), Positives = 458/765 (59%), Gaps = 96/765 (12%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           R+EYK+GNR+LLNVI++GISASQN++ P +QYV+ K EVALR KK EL+CI GGTPLPQ 
Sbjct: 213 RNEYKLGNRVLLNVISSGISASQNKYEPVKQYVSXKNEVALRGKKXELYCIHGGTPLPQI 272

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +WSK+G  I  +DRI QGNYGKSLIIKHV   D+G+YTCE SNGVG+AKSYSI L V+A 
Sbjct: 273 VWSKNGEVIRTNDRIMQGNYGKSLIIKHVNSKDEGTYTCEASNGVGDAKSYSIHLQVMAV 332

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFT+EPE INAAE+ETV F+C A+G+P PEI W+HNGKPIS+APPNPRRKV PN I IE
Sbjct: 333 PYFTIEPEIINAAEDETVEFKCAANGVPVPEIKWIHNGKPISEAPPNPRRKVTPNSIIIE 392

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
            L K DTGNYGCNATNSLGYVYKDVYVNVLA  PEIT+ P D  TVDGK V +TCRVFGA
Sbjct: 393 KLTKKDTGNYGCNATNSLGYVYKDVYVNVLALEPEITQPPADIATVDGKIVRITCRVFGA 452

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP V WI N +ELTGGRY  L++GDL+I +V F D+G YTC A NK G  + SG+L VK
Sbjct: 453 PKPAVKWIRNGQELTGGRYKTLDSGDLEIENVIFLDAGTYTCHASNKFGEIEASGNLAVK 512

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           EHT ITD+PEDYEV AG +ATFRCNAV+D SL L+I WL   EPIDFE EPRF++S DYS
Sbjct: 513 EHTRITDEPEDYEVAAGSTATFRCNAVTDSSLTLTIDWLSNGEPIDFEMEPRFIRSTDYS 572

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQV-IDAKKAVVSWN 424
           L +TK++ELD+G YTC A TELD  +AQATL VQ   + P+   L+ V      A + W 
Sbjct: 573 LMITKTTELDTGTYTCVAHTELDEAKAQATLVVQ---DVPNPPKLVSVNCAGSTATIHWT 629

Query: 425 PVSPQSLRGHFRGYKVQ---TWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS--KNFA- 478
           P+     R     Y +Q   ++T    E       ++K    +TE    VP S   N+  
Sbjct: 630 PMGDN--RAPILRYTIQHNTSFTPDTWE-------ISKDPVPSTEQTYDVPMSPWANYTF 680

Query: 479 RVLAFNGAYNGPPS---------EIISFVTPEGVPG---TVQSLEAIPLGSSAFYLKW-V 525
           RVLA+N      PS         + + F  P+ V G   T Q+L           + W V
Sbjct: 681 RVLAWNKIGPSLPSPHSDVCTTLQDVPFTNPDNVMGKGTTPQNL----------VISWTV 730

Query: 526 KPE-QPNGVLMGYKIKY-QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            P+ + N     Y++ Y + + G K       +  I D    +  +       +Y+I + 
Sbjct: 731 MPQIEHNAPKFMYRVYYRRDIPGEKW-----TIEDIHDWKKNNLVVDNQPTYQRYKIKVV 785

Query: 584 GYTKAGDG--AESKYLFY----VPFKNPDNVE-GRGSTPNNLVISWTAMPEIEHNAPHFK 636
              + G+   A  +   Y    VP + P N    +  +  +   SW  +PE         
Sbjct: 786 AINERGECRIAPEEVTGYSGEDVPLQAPSNFTLNQVKSSTSAQFSWNPVPEESVRGELQG 845

Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIV 696
           Y+I        + W + D                                GE  +RE+ +
Sbjct: 846 YKI--------QTWTEKD--------------------------------GEKGMREIDI 865

Query: 697 NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
             G  T   V KFVP +KN+ R+LA+NG Y GPPSE +SF TPEG
Sbjct: 866 RGGNRTHALVTKFVPFNKNYVRILAYNGRYAGPPSETLSFDTPEG 910



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 117/192 (60%), Positives = 144/192 (75%)

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
           VPL+APSNFTL QV  +  A  SWNPV  +S+RG  +GYK+QTWTEKDGE  +RE+ +  
Sbjct: 808 VPLQAPSNFTLNQVKSSTSAQFSWNPVPEESVRGELQGYKIQTWTEKDGEKGMREIDIRG 867

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
           G  T   V KFVP +KN+ R+LA+NG Y GPPSE +SF TPEGVPGTV +LEA P+GSSA
Sbjct: 868 GNRTHALVTKFVPFNKNYVRILAYNGRYAGPPSETLSFDTPEGVPGTVLNLEAFPMGSSA 927

Query: 520 FYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYR 579
            +L W KP +PNG+L GY+I Y+SV GT++GPLLER P+I DP  TSAKLA L P TKYR
Sbjct: 928 LFLAWTKPAEPNGILTGYRIYYESVNGTRLGPLLERKPHIIDPEATSAKLAALAPDTKYR 987

Query: 580 IHLAGYTKAGDG 591
           +H+   TK G+G
Sbjct: 988 VHVRATTKVGEG 999



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 166/388 (42%), Gaps = 38/388 (9%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPIN-PS--DRISQGNYGKSLI 90
           +Q +   + ++   +K   + C   G P P+  W K+G     P+  DRISQ     +L+
Sbjct: 33  EQLFQVAQAKINENDKPFLIECEAEGEPAPRYRWIKNGKNFEWPAYDDRISQQPGRGTLV 92

Query: 91  IKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECK- 148
           I      D G Y C   N  G A S S+ +       F  + P  ++A E +     C+ 
Sbjct: 93  ISRPRDEDLGQYQCFAENEWGIATSNSVFVRKAELNSFKDQNPISLDANEGQPFKLTCQP 152

Query: 149 ASGLPEPEIHW-VHNGKPISQAPPNPRRKVGP-NRITIENLRKSDTGN---YGCNATNSL 203
             G P+P ++W + +     ++  N R  + P   +   N+ ++D  +   Y C AT+  
Sbjct: 153 PDGWPKPNVYWLIQDTAGGIKSINNSRMTLDPEGNLWFSNVTRNDASDDFYYACAATSVF 212

Query: 204 GYVYK---DVYVNVLAHAPEITE----------APKDEYTVDGKTVVLTCRVFGAPKPEV 250
              YK    V +NV++     ++          + K+E  + GK   L C   G P P++
Sbjct: 213 RNEYKLGNRVLLNVISSGISASQNKYEPVKQYVSXKNEVALRGKKXELYCIHGGTPLPQI 272

Query: 251 NWIHNQKEL-TGGRYTILETG-DLKITDVAFADSGEYTCFARNKLGTAQG-SGSLTVKEH 307
            W  N + + T  R      G  L I  V   D G YTC A N +G A+  S  L V   
Sbjct: 273 VWSKNGEVIRTNDRIMQGNYGKSLIIKHVNSKDEGTYTCEASNGVGDAKSYSIHLQVMAV 332

Query: 308 THITDQPEDYEVEAGQSATFRC--NAVSDPSLKLSIVWLRGSEPIDFESEP---RFVQSN 362
            + T +PE       ++  F+C  N V  P +K    W+   +PI  E+ P   R V  N
Sbjct: 333 PYFTIEPEIINAAEDETVEFKCAANGVPVPEIK----WIHNGKPIS-EAPPNPRRKVTPN 387

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFI 390
             S+ + K ++ D+G Y C A   L ++
Sbjct: 388 --SIIIEKLTKKDTGNYGCNATNSLGYV 413


>gi|242019922|ref|XP_002430407.1| Neuroglian precursor, putative [Pediculus humanus corporis]
 gi|212515537|gb|EEB17669.1| Neuroglian precursor, putative [Pediculus humanus corporis]
          Length = 1253

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 291/437 (66%), Positives = 343/437 (78%), Gaps = 6/437 (1%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           R+EYKIGN + L VIATGI+ASQNR  P QQYV+RK E+ALR K+VELFCIFGGTPLPQ 
Sbjct: 214 RNEYKIGNTVALKVIATGIAASQNRQEPVQQYVSRKNEIALRGKRVELFCIFGGTPLPQI 273

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +WSKDG PI  +DR++QG+YGKSLIIKHV F D GSY CE SNGVG+AKSYSI L+VLA 
Sbjct: 274 VWSKDGQPIRLNDRMTQGHYGKSLIIKHVTFEDAGSYVCEASNGVGQAKSYSIGLTVLAV 333

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFTV+PE INAAE ETV F C+A+G+PEP+I W+HNG PI+ APPNPRRKV PN I IE
Sbjct: 334 PYFTVQPEIINAAEGETVEFRCEANGVPEPQIKWIHNGLPIALAPPNPRRKVTPNSIVIE 393

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
            L K DTGNYGCNATNSLGYVYKDVYVNVLA  PEI  +P D+ TVDG+TV+LTCRVFGA
Sbjct: 394 KLDKLDTGNYGCNATNSLGYVYKDVYVNVLALPPEILTSPTDKETVDGRTVILTCRVFGA 453

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKPEV WI N  ELTGGRY  L +GDL+I DV F D+G+YTC+A+NK G  + SGSL+VK
Sbjct: 454 PKPEVKWIRNSMELTGGRYNTLSSGDLEIKDVNFLDAGQYTCYAQNKFGHIEASGSLSVK 513

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           EHT ITD PEDYE+  G +ATFRCNAV+D +L L+I WL+  E IDF+SEPRFV+S DYS
Sbjct: 514 EHTKITDAPEDYEIPIGTTATFRCNAVTDSTLALTIDWLKDGEVIDFDSEPRFVKSADYS 573

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQV-IDAKKAVVSWN 424
           LT+TK++ELDSG YTC A+T+LD  EAQATLTVQ   + P+   LI+V  +   A + W 
Sbjct: 574 LTITKTTELDSGVYTCLAKTDLDKAEAQATLTVQ---DVPNAPRLIKVQCNRMDASIRWE 630

Query: 425 PVSPQSLRGHFRGYKVQ 441
           P+     R     Y +Q
Sbjct: 631 PLGDN--RAPILSYTIQ 645



 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 124/194 (63%), Positives = 158/194 (81%), Gaps = 1/194 (0%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VPL AP NFTL+QV  +  A++SW PV P+S+RGHF+GYK+QTW+E +GE  +RE  V K
Sbjct: 809  VPLMAPQNFTLVQVTTSTDALLSWLPVPPESVRGHFKGYKIQTWSEAEGEEGMRETHV-K 867

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             ++T T V KF+P SKN+ARVL +NG YNGPPS+ +SF TPEGVPGTV + EA P+GSSA
Sbjct: 868  NDATRTLVTKFIPHSKNYARVLVYNGRYNGPPSDTLSFDTPEGVPGTVSAFEAFPMGSSA 927

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYR 579
             +L W KPEQPNG++ GYK++YQ+VKGTKVGPL+ER P+I+DP+ T AKLAGLEP+TKYR
Sbjct: 928  LFLVWKKPEQPNGIITGYKVQYQTVKGTKVGPLVEREPFITDPSQTRAKLAGLEPNTKYR 987

Query: 580  IHLAGYTKAGDGAE 593
            IH+ G T+AG+G E
Sbjct: 988  IHIRGLTRAGEGEE 1001



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 167/606 (27%), Positives = 265/606 (43%), Gaps = 61/606 (10%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + V   C   G P P+I W  +G+PI       +   G + I I+++   D G+Y 
Sbjct: 253 ALRGKRVELFCIFGGTPLPQIVWSKDGQPIRLNDRMTQGHYGKSLI-IKHVTFEDAGSYV 311

Query: 197 CNATNSLGYVYK-DVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
           C A+N +G      + + VLA  P  T  P+     +G+TV   C   G P+P++ WIHN
Sbjct: 312 CEASNGVGQAKSYSIGLTVLA-VPYFTVQPEIINAAEGETVEFRCEANGVPEPQIKWIHN 370

Query: 256 -----------QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTV 304
                      ++++T     I +   L        D+G Y C A N LG       + V
Sbjct: 371 GLPIALAPPNPRRKVTPNSIVIEKLDKL--------DTGNYGCNATNSLGYVYKDVYVNV 422

Query: 305 KEHT-HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSND 363
                 I   P D E   G++    C     P  K  + W+R S  +   +  R+   + 
Sbjct: 423 LALPPEILTSPTDKETVDGRTVILTCRVFGAP--KPEVKWIRNSMEL---TGGRYNTLSS 477

Query: 364 YSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPL---EAPSNFTLIQVIDAKKAV 420
             L +   + LD+GQYTC AQ +   IEA  +L+V+      +AP ++   ++     A 
Sbjct: 478 GDLEIKDVNFLDAGQYTCYAQNKFGHIEASGSLSVKEHTKITDAPEDY---EIPIGTTAT 534

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGS-IRELIVNKGESTTTEVDKFVPASKNFAR 479
              N V+  +L       K     + D E   ++    +   + TTE+D         + 
Sbjct: 535 FRCNAVTDSTLALTIDWLKDGEVIDFDSEPRFVKSADYSLTITKTTELD---------SG 585

Query: 480 VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKI 539
           V       +   +E  + +T + VP   + L  +        ++W         ++ Y I
Sbjct: 586 VYTCLAKTDLDKAEAQATLTVQDVPNAPR-LIKVQCNRMDASIRWEPLGDNRAPILSYTI 644

Query: 540 KYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY 599
           +Y     T   P +  + Y + P+        + P   Y   +    K G    S +   
Sbjct: 645 QYN----TSFAPDIWEVAYDNVPSIDQTYSVAMSPWVNYTFRVLARNKIGISLPSGHSEV 700

Query: 600 ------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQD 653
                 VP+KNPDNVEG+G+ PNNLVISWT MPEIEHN   F Y ++W+++  G+ WN +
Sbjct: 701 CQTQPDVPYKNPDNVEGKGTHPNNLVISWTPMPEIEHNDEGFHYVVYWKKNIPGQNWNSE 760

Query: 654 DVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 713
           DV+DW++S LV+++QPTFQ Y+IKV+      +     +E+I   GE      D  + A 
Sbjct: 761 DVMDWQRSSLVISDQPTFQEYKIKVIAINRRGEANVGAKEVIGYSGE------DVPLMAP 814

Query: 714 KNFARV 719
           +NF  V
Sbjct: 815 QNFTLV 820



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 166/401 (41%), Gaps = 41/401 (10%)

Query: 55  CIFGGTPLPQTIWSKDGVPINP---SDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVG 111
           C   G P P+  W K+G P       +R+SQ     +L+I      D G Y C   N  G
Sbjct: 55  CEAEGEPAPKYRWIKNGKPFEYQVYDNRMSQQPGRGTLVITSPRDEDLGQYQCFAENTWG 114

Query: 112 EAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECK-ASGLPEPEIHW-VHNGKPISQ 168
            A S S+ +       F  EP   +NA E E     C    G P+P ++W + N      
Sbjct: 115 TATSNSVFVRKAELNAFKDEPPITVNANEGEPFRLVCHPPDGWPKPNVYWLIQNSDGGIM 174

Query: 169 APPNPRRKVGP-NRITIENLRKSDTGN---YGCNATNSLGYVYK---DVYVNVLA---HA 218
           +  N R  + P   +   N+ + D+     Y C AT+     YK    V + V+A    A
Sbjct: 175 SINNSRMTLDPEGNLWFSNVTREDSSKEFRYVCAATSPFRNEYKIGNTVALKVIATGIAA 234

Query: 219 PEITEAP-------KDEYTVDGKTVVLTCRVFGAPKPEVNW------IHNQKELTGGRYT 265
            +  + P       K+E  + GK V L C   G P P++ W      I     +T G Y 
Sbjct: 235 SQNRQEPVQQYVSRKNEIALRGKRVELFCIFGGTPLPQIVWSKDGQPIRLNDRMTQGHY- 293

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQG-SGSLTVKEHTHITDQPEDYEVEAGQS 324
                 L I  V F D+G Y C A N +G A+  S  LTV    + T QPE      G++
Sbjct: 294 ---GKSLIIKHVTFEDAGSYVCEASNGVGQAKSYSIGLTVLAVPYFTVQPEIINAAEGET 350

Query: 325 ATFRC--NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCR 382
             FRC  N V +P +K    W+    PI         +    S+ + K  +LD+G Y C 
Sbjct: 351 VEFRCEANGVPEPQIK----WIHNGLPIALAPPNPRRKVTPNSIVIEKLDKLDTGNYGCN 406

Query: 383 AQTELDFIEAQATLTV-QVPLEAPSNFTLIQVIDAKKAVVS 422
           A   L ++     + V  +P E  ++ T  + +D +  +++
Sbjct: 407 ATNSLGYVYKDVYVNVLALPPEILTSPTDKETVDGRTVILT 447



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/63 (58%), Positives = 48/63 (76%), Gaps = 1/63 (1%)

Query: 679 VQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           +QTW+E +GE  +RE  V K ++T T V KF+P SKN+ARVL +NG YNGPPS+ +SF T
Sbjct: 849 IQTWSEAEGEEGMRETHV-KNDATRTLVTKFIPHSKNYARVLVYNGRYNGPPSDTLSFDT 907

Query: 739 PEG 741
           PEG
Sbjct: 908 PEG 910



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 101/268 (37%), Gaps = 35/268 (13%)

Query: 145 FECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR--ITIENLRKSDTGNYGCNATNS 202
            EC+A G P P+  W+ NGKP      + R    P R  + I + R  D G Y C A N+
Sbjct: 53  IECEAEGEPAPKYRWIKNGKPFEYQVYDNRMSQQPGRGTLVITSPRDEDLGQYQCFAENT 112

Query: 203 LGYVYKDVYVNVLAHAPEITEAPKDEYTV-----DGKTVVLTCR-VFGAPKPEVNWIHNQ 256
            G    +   +V     E+  A KDE  +     +G+   L C    G PKP V W+   
Sbjct: 113 WGTATSN---SVFVRKAELN-AFKDEPPITVNANEGEPFRLVCHPPDGWPKPNVYWLIQN 168

Query: 257 KE-----LTGGRYTILETGDLKITDVAFADSGE---YTCFARNKLGTAQGSGSLTVKEHT 308
            +     +   R T+   G+L  ++V   DS +   Y C A +        G+    +  
Sbjct: 169 SDGGIMSINNSRMTLDPEGNLWFSNVTREDSSKEFRYVCAATSPFRNEYKIGNTVALKVI 228

Query: 309 HITDQPEDYEVEAGQSATFRCNAVSDPSLKL------------SIVWLRGSEPIDFESEP 356
                      E  Q    R N ++    ++             IVW +  +PI      
Sbjct: 229 ATGIAASQNRQEPVQQYVSRKNEIALRGKRVELFCIFGGTPLPQIVWSKDGQPIRLND-- 286

Query: 357 RFVQSN-DYSLTVTKSSELDSGQYTCRA 383
           R  Q +   SL +   +  D+G Y C A
Sbjct: 287 RMTQGHYGKSLIIKHVTFEDAGSYVCEA 314



 Score = 43.5 bits (101), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 61/156 (39%), Gaps = 26/156 (16%)

Query: 210 VYVNVLAHAPE--ITEAPKDEYTV--------DGKTVVLTCRVFGAPKPEVNWIHNQKEL 259
           +YV  ++ +P   I + P DE           + K   + C   G P P+  WI N K  
Sbjct: 15  LYVGAISQSPPRIIKQPPTDELLFQVAKQQNENDKPFFIECEAEGEPAPKYRWIKNGKPF 74

Query: 260 TGGRYTILET--------GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK-EHTHI 310
               Y + +         G L IT     D G+Y CFA N  GTA  +     K E    
Sbjct: 75  ---EYQVYDNRMSQQPGRGTLVITSPRDEDLGQYQCFAENTWGTATSNSVFVRKAELNAF 131

Query: 311 TDQPEDYEVEAGQSATFR--CNAVSDPSLKLSIVWL 344
            D+P    V A +   FR  C+   D   K ++ WL
Sbjct: 132 KDEPP-ITVNANEGEPFRLVCHP-PDGWPKPNVYWL 165


>gi|157118545|ref|XP_001659157.1| cell adhesion molecule [Aedes aegypti]
 gi|108875668|gb|EAT39893.1| AAEL008340-PA, partial [Aedes aegypti]
          Length = 1182

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 352/760 (46%), Positives = 449/760 (59%), Gaps = 87/760 (11%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           R+EYKIGNR+LL V  TGISA+QN+H P++QYV+RK EVALR KK+E+FCI+GGTPLPQ 
Sbjct: 150 RNEYKIGNRVLLQVKPTGISAAQNKHRPERQYVSRKNEVALRGKKIEIFCIYGGTPLPQV 209

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +W+KDG PI  SD+I Q NYGKSL+IKH  F DQG+YTCE SNGVG A+SYSI L V A 
Sbjct: 210 VWTKDGRPIQWSDKIQQNNYGKSLVIKHASFEDQGTYTCESSNGVGSAESYSIRLEVQAV 269

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFT EPE  NAAE+ET  F C+ASG+P+P I W+HNGKP+ Q+ PNPRR+V  NRI   
Sbjct: 270 PYFTKEPEIYNAAEDETAEFTCEASGVPKPNIIWIHNGKPLDQSKPNPRRQVSSNRIYFT 329

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
            L K DTGNYGCNATNSLGYVYKDVY+NVLA APEITE PK EYTVD + V +TCRVFGA
Sbjct: 330 KLEKGDTGNYGCNATNSLGYVYKDVYLNVLALAPEITEPPKLEYTVDRRNVTMTCRVFGA 389

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKPEV WI N +ELTGG++ +   GDL I  V F+D+GEYTC A NKLG    SG L VK
Sbjct: 390 PKPEVKWIRNGRELTGGKFKVEANGDLFIRGVEFSDAGEYTCNAVNKLGEKSASGELVVK 449

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           EHT I D+P+DYEV AG  ATFRCNAV+D SL+L+I WL   E IDFES+PRFV +NDYS
Sbjct: 450 EHTKIIDEPQDYEVVAGTPATFRCNAVADSSLELTIEWLTNGETIDFESQPRFVMTNDYS 509

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKK--AVVSW 423
           LT++K+ ELD+G YTC A+T+LD + A ATLTV     APS    ++ I+  +  A +SW
Sbjct: 510 LTISKTIELDTGVYTCFARTDLDEVMANATLTVYDRPNAPS----LESIECHQTVATLSW 565

Query: 424 NPVSPQSLRGHFRGYKVQ---TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
            P      R     Y ++   ++T    E S +++        T  VD   P S    RV
Sbjct: 566 KPNGDN--RSPILHYTIEFNTSFTPDTWEISSKDV---PATDFTYSVD-MSPWSNYTFRV 619

Query: 481 LAFNGAYNGPPS---------EIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQ 529
           +A N      PS           + F  P+ V G  Q  E      +   ++W  +   +
Sbjct: 620 IAINKVGPSLPSGHSDVCTTQPSVPFKNPDNVEG--QGTEP-----NNLVIRWTPMSEIE 672

Query: 530 PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
            N     Y++ +Q   G       +    I D   +   +   E   +YRI +    + G
Sbjct: 673 HNAPRFQYRVYWQLDTGVDHWNTED----IFDWRQSELVVRDQETFRRYRIKVVAINELG 728

Query: 590 DG--AESKYLFYV----PFKNPDNVEG-RGSTPNNLVISWTAMPEIEHNAPHFK-YRIFW 641
           +   A  + + Y     P   P N    + + P + ++SW  + E E    HFK Y+I  
Sbjct: 729 EANVAPKEVIGYSGEDKPLDAPTNFTLIQVTAPTSAILSWNPVSE-ESIRGHFKGYKI-- 785

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGES 701
                 + W   D                                GE ++RE++V   +S
Sbjct: 786 ------QTWTDAD--------------------------------GEENLREILVT-ADS 806

Query: 702 TTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
               V  FVP S N+AR+LA+NG +NGPPS  +SF TPEG
Sbjct: 807 KQALVTDFVPDSTNYARILAYNGRFNGPPSTTLSFDTPEG 846



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 127/242 (52%), Positives = 164/242 (67%), Gaps = 11/242 (4%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           PL+AP+NFTLIQV     A++SWNPVS +S+RGHF+GYK+QTWT+ DGE ++RE++V   
Sbjct: 746 PLDAPTNFTLIQVTAPTSAILSWNPVSEESIRGHFKGYKIQTWTDADGEENLREILVT-A 804

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           +S    V  FVP S N+AR+LA+NG +NGPPS  +SF TPEGVP T+Q+L+AIPLGSSAF
Sbjct: 805 DSKQALVTDFVPDSTNYARILAYNGRFNGPPSTTLSFDTPEGVPNTIQTLDAIPLGSSAF 864

Query: 521 YLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRI 580
            LKW KP QPNG L GYKI Y+ VKGT  GP +ER P+I DP  T AKL  L+P+TKYR+
Sbjct: 865 LLKWKKPLQPNGKLTGYKIYYEEVKGTSFGPRMEREPHIHDPKITEAKLGKLKPNTKYRV 924

Query: 581 HLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
           H+ G TKAG+G +    +Y+  K      G    P+    +W   P     A     R+ 
Sbjct: 925 HVVGTTKAGEGQD----YYIEQKTG---TGTAIVPDQPYFAWEQEPNDNGQA---DIRVI 974

Query: 641 WR 642
           W+
Sbjct: 975 WQ 976



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 148/347 (42%), Gaps = 31/347 (8%)

Query: 78  DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFIN 136
           DR+SQ     +L+IK     D G Y C   N  G A S S+ +       F  E  + I+
Sbjct: 17  DRMSQQPGRGTLVIKSPRDEDLGQYQCFAENEHGTATSNSVFVRKAELNSFKDESAKTID 76

Query: 137 AAEEETVTFECK-ASGLPEPEIHW-VHNGKPISQAPPNPRRKVGP-NRITIENLRKSDTG 193
             E   +  +C+   G P P ++W + N      +  N R  + P   +   N+ + D  
Sbjct: 77  VDEGSPLKMQCQPPDGWPRPNVYWLIQNMDGGISSINNSRMTLDPEGNLWFSNVTRGDAS 136

Query: 194 N---YGCNATNSLGYVYK---DVYVNVL---------AHAPEITE-APKDEYTVDGKTVV 237
           +   Y C A++     YK    V + V           H PE    + K+E  + GK + 
Sbjct: 137 DDFVYACAASSLFRNEYKIGNRVLLQVKPTGISAAQNKHRPERQYVSRKNEVALRGKKIE 196

Query: 238 LTCRVFGAPKPEVNWIHNQKELTGGRYTILET--GDLKITDVAFADSGEYTCFARNKLGT 295
           + C   G P P+V W  + + +              L I   +F D G YTC + N +G+
Sbjct: 197 IFCIYGGTPLPQVVWTKDGRPIQWSDKIQQNNYGKSLVIKHASFEDQGTYTCESSNGVGS 256

Query: 296 AQG-SGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFES 354
           A+  S  L V+   + T +PE Y     ++A F C A   P  K +I+W+   +P+D +S
Sbjct: 257 AESYSIRLEVQAVPYFTKEPEIYNAAEDETAEFTCEASGVP--KPNIIWIHNGKPLD-QS 313

Query: 355 EP---RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           +P   R V SN   +  TK  + D+G Y C A   L ++     L V
Sbjct: 314 KPNPRRQVSSN--RIYFTKLEKGDTGNYGCNATNSLGYVYKDVYLNV 358


>gi|170044415|ref|XP_001849844.1| cell adhesion molecule [Culex quinquefasciatus]
 gi|167867576|gb|EDS30959.1| cell adhesion molecule [Culex quinquefasciatus]
          Length = 1218

 Score =  592 bits (1527), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 352/760 (46%), Positives = 451/760 (59%), Gaps = 87/760 (11%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           R+EYKIGNR++L V  TGISA+QNRH P++QYV+RK EVALR KK+ELFCI+GGTPLPQ 
Sbjct: 163 RNEYKIGNRVVLQVKQTGISAAQNRHRPERQYVSRKNEVALRGKKIELFCIYGGTPLPQV 222

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +W+KDG  I  +D+I Q NYGKSL+IKH  F DQG+YTCE SNGVG A+SYSI L V A 
Sbjct: 223 VWTKDGRAIQWNDKIQQNNYGKSLVIKHATFEDQGTYTCESSNGVGSAESYSIRLEVQAI 282

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFT +PE +  AEEET  F C+A+G+P+P I W+HNGKPI Q PPNPRR V  NRI   
Sbjct: 283 PYFTTQPESVIKAEEETAEFRCEATGVPKPNIIWIHNGKPIEQTPPNPRRFVSGNRIFFN 342

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
            L KSDTGNYGCNATNSLGYVYKDVY+NVLA  PEI+E P+ E+TVD + V LTCRVFGA
Sbjct: 343 KLEKSDTGNYGCNATNSLGYVYKDVYLNVLALPPEISEPPRREHTVDRRNVTLTCRVFGA 402

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKPEV WI N +ELTGGRY +L TGDL I  V F+D+G+YTC A NKLG     G L VK
Sbjct: 403 PKPEVKWIRNGRELTGGRYQVLPTGDLFIRGVEFSDAGQYTCNAVNKLGEKSADGELIVK 462

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           EHT I D+P+DYEV AG  ATFRCNAV+D SL L+I WL   EPIDF+++PRFV +NDYS
Sbjct: 463 EHTKIIDEPQDYEVVAGTPATFRCNAVADSSLALTIEWLTNGEPIDFDTQPRFVMTNDYS 522

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV--VSW 423
           LT+TK+ ELD+G Y+C A+T+LD + A ATLTV     APS    ++ I+  +AV  +SW
Sbjct: 523 LTITKTIELDTGVYSCVAKTDLDEVIANATLTVYDRPNAPS----LEGIECHQAVATLSW 578

Query: 424 NPVSPQSLRGHFRGYKVQ---TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
            P      R     Y ++   ++T    E S +++        T  VD   P S    RV
Sbjct: 579 TPNGDN--RSPILHYTIEYNTSFTPDTWEISSKDV---PATDFTYSVD-MSPWSNYTFRV 632

Query: 481 LAFNGAYNGPP---SEI------ISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQ 529
           +A N      P   SE+      + F  P+ V G  Q  E      +   +KW  +   +
Sbjct: 633 IAINKVGPSSPSGHSEVCTTQPSVPFKNPDNVEG--QGTEP-----NNLVIKWTPMSEIE 685

Query: 530 PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
            N     Y++ +Q   G       +    I D   T   +       +YRI +    + G
Sbjct: 686 HNAPRFQYRVYWQLDTGVDNWNTED----IFDWQQTELVIRDQPTFQRYRIKVVAINEMG 741

Query: 590 DG--AESKYLFYV----PFKNPDNVEG-RGSTPNNLVISWTAMPEIEHNAPHFK-YRIFW 641
           +   A  + + Y     P + P N    + + P + ++SW  + E +    HFK Y+I  
Sbjct: 742 EANVAPKEVIGYSGEDKPLEAPQNFTLIQVTAPTSAILSWNPVSE-DSVRGHFKGYKI-- 798

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGES 701
                 + W                                TE DGE ++RE++V   +S
Sbjct: 799 ------QTW--------------------------------TEADGEENLREVLVT-ADS 819

Query: 702 TTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
               V  F+P S NFAR+LA+NG +NGP S  +SF TPEG
Sbjct: 820 KQALVTDFIPDSTNFARILAYNGRFNGPASTTLSFDTPEG 859



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 129/241 (53%), Positives = 163/241 (67%), Gaps = 11/241 (4%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           PLEAP NFTLIQV     A++SWNPVS  S+RGHF+GYK+QTWTE DGE ++RE++V   
Sbjct: 759 PLEAPQNFTLIQVTAPTSAILSWNPVSEDSVRGHFKGYKIQTWTEADGEENLREVLVT-A 817

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           +S    V  F+P S NFAR+LA+NG +NGP S  +SF TPEGVP T+Q+L+AIPLGSSAF
Sbjct: 818 DSKQALVTDFIPDSTNFARILAYNGRFNGPASTTLSFDTPEGVPNTIQTLDAIPLGSSAF 877

Query: 521 YLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRI 580
            LKW KP QPNG L GYKI Y+ VKGT  GP +ER P+ISD   T AKL  L+PSTKYR+
Sbjct: 878 LLKWKKPLQPNGKLTGYKIYYEEVKGTSFGPRMEREPHISDARLTEAKLGKLKPSTKYRV 937

Query: 581 HLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
           H+ G T+AG+G +    +Y+  K      G    P+    SW   P   +++ H   R+ 
Sbjct: 938 HVVGTTRAGEGQD----YYIEQK---TAAGVALQPDQPYFSWEHEP---NDSGHADVRVV 987

Query: 641 W 641
           W
Sbjct: 988 W 988



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 142/347 (40%), Gaps = 31/347 (8%)

Query: 78  DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFIN 136
           DR+SQ     +L+IK     D G Y C   N  G A S S+ +       F  E  + + 
Sbjct: 30  DRMSQQPGRGTLVIKSPRDEDLGQYQCFAENEHGTATSNSVFVRKAELNSFKDESAKTVQ 89

Query: 137 AAEEETVTFECK-ASGLPEPEIHW-VHNGKPISQAPPNPRRKVGP-NRITIENLRKSDTG 193
             E      +C+   G P P ++W + N      +  N R  + P   +   N+ + D  
Sbjct: 90  VDEGMPFKMQCQPPDGWPRPNVYWLIQNMDGGISSINNSRMTLDPEGNLWFSNVTRRDQS 149

Query: 194 N---YGCNATNSLGYVYKDVYVNVLA------------HAPEITE-APKDEYTVDGKTVV 237
           +   Y C A++     YK     VL             H PE    + K+E  + GK + 
Sbjct: 150 DDFWYACAASSLFRNEYKIGNRVVLQVKQTGISAAQNRHRPERQYVSRKNEVALRGKKIE 209

Query: 238 LTCRVFGAPKPEVNWIHNQKELTGGRYTILET--GDLKITDVAFADSGEYTCFARNKLGT 295
           L C   G P P+V W  + + +              L I    F D G YTC + N +G+
Sbjct: 210 LFCIYGGTPLPQVVWTKDGRAIQWNDKIQQNNYGKSLVIKHATFEDQGTYTCESSNGVGS 269

Query: 296 AQG-SGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFES 354
           A+  S  L V+   + T QPE       ++A FRC A   P  K +I+W+   +PI+ ++
Sbjct: 270 AESYSIRLEVQAIPYFTTQPESVIKAEEETAEFRCEATGVP--KPNIIWIHNGKPIE-QT 326

Query: 355 EP---RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
            P   RFV  N   +   K  + D+G Y C A   L ++     L V
Sbjct: 327 PPNPRRFVSGN--RIFFNKLEKSDTGNYGCNATNSLGYVYKDVYLNV 371


>gi|312380248|gb|EFR26301.1| hypothetical protein AND_07751 [Anopheles darlingi]
          Length = 1117

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 351/760 (46%), Positives = 446/760 (58%), Gaps = 87/760 (11%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           RSEYKIGNR+LL V  TGISA+QNRH P +QYV+RK EVAL+ K+VELFCI+GGTPLP+T
Sbjct: 155 RSEYKIGNRVLLQVKQTGISAAQNRHPPTRQYVSRKNEVALKGKQVELFCIYGGTPLPET 214

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +W+K+G  I  +D+I Q NYGKSL I+ V   D G+YTCEVSNGVG A SYSI+L+V A 
Sbjct: 215 VWTKNGRAIIWNDKIQQDNYGKSLKIRRVSSEDAGTYTCEVSNGVGNADSYSINLAVNAV 274

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFTVEPE +NAAE ET  F C+A+G P P I W+HNGKPI Q+P NPRR V  NRI   
Sbjct: 275 PYFTVEPEIVNAAEGETAEFRCEAAGDPSPNIIWIHNGKPIDQSPRNPRRVVSTNRIYFN 334

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
            L K DTGNYGCNATNSLGYVYKDV++NVLA APEIT+ PK E+TVD + V +TCRVFGA
Sbjct: 335 KLEKGDTGNYGCNATNSLGYVYKDVFLNVLALAPEITDPPKREFTVDQRNVTMTCRVFGA 394

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP+V W+ NQ+ELTGGRY  L +GDL I DV F D+GEYTC A NKLG  Q SG L VK
Sbjct: 395 PKPQVKWVRNQRELTGGRYQTLSSGDLFIRDVKFDDAGEYTCHASNKLGERQASGELIVK 454

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           EHT I D P+DYEVEAG +ATFRCNAV+D SL+L+I WL   E IDF+S+PRF++++D S
Sbjct: 455 EHTVINDPPQDYEVEAGTTATFRCNAVADSSLELTIEWLTNGEVIDFDSQPRFIRTSDNS 514

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVID-AKKAVVSWN 424
           L ++K+ ELD+G Y+C A+TELD + A ATLTV   ++ P+  TL +VI   K A + W 
Sbjct: 515 LMISKTIELDTGIYSCLAKTELDEVMANATLTV---MDRPNPPTLERVICYGKVAKIEW- 570

Query: 425 PVSPQSLRGHFRGYKVQ--------TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
             S    R     Y ++        TWT   +D  G+    +VN             P +
Sbjct: 571 -TSNGDNRSPILNYIIEYNTSFTPDTWTLLTEDVPGTDLSWVVNT-----------TPWN 618

Query: 475 KNFARVLAFNGAYNGPP---SEIISFVT--PEGVPGTVQSLEAIPLGSSAFYLKWVKPEQ 529
               RV+A N      P   SE+ S  T  P   P  V++    P   +   +KW    Q
Sbjct: 619 NYTYRVIAVNKVGRSLPSGHSEVCSTETSVPYKCPDGVEAEGTEP---NNLVIKWNPMAQ 675

Query: 530 PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
            +    G+  +    +    G        + D   +S  + GL   T+Y I +      G
Sbjct: 676 VDHNAPGFHYRVYWRRNIPSGTWSSVD--VRDWRQSSYTVEGLPTFTEYHIKVIAVNDRG 733

Query: 590 DGAESKYLFYV------PFKNPDNVEGRGST-PNNLVISWTAMPEIEHNAPHFK-YRIFW 641
           +     +  YV      P   P N      T P+  ++SW  +   E    HFK Y+I  
Sbjct: 734 EANSGPWEKYVYSGEDKPLDAPTNFTLIQVTGPSTAIVSWNPVTP-ESLRGHFKGYKI-- 790

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGES 701
                                                 QTWTE DGE ++RE+++   ++
Sbjct: 791 --------------------------------------QTWTEADGEENLREVLIT-ADA 811

Query: 702 TTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
               +   VP S N+AR+LA+NG YNGP S  ISF TPEG
Sbjct: 812 KQALITVLVPDSTNYARILAYNGRYNGPASTTISFDTPEG 851



 Score =  286 bits (731), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 206/599 (34%), Positives = 288/599 (48%), Gaps = 77/599 (12%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEF 96
           K+E  +  + V + C   G P PQ  W ++         ++ G Y       L I+ V+F
Sbjct: 375 KREFTVDQRNVTMTCRVFGAPKPQVKWVRN------QRELTGGRYQTLSSGDLFIRDVKF 428

Query: 97  SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA---SGLP 153
            D G YTC  SN +GE ++ S +L V         P+        T TF C A   S L 
Sbjct: 429 DDAGEYTCHASNKLGERQA-SGELIVKEHTVINDPPQDYEVEAGTTATFRCNAVADSSL- 486

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           E  I W+ NG+ I         +   N + I    + DTG Y C A   L  V  +  + 
Sbjct: 487 ELTIEWLTNGEVIDFDSQPRFIRTSDNSLMISKTIELDTGIYSCLAKTELDEVMANATLT 546

Query: 214 VLAHAPEIT--------EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWI-HNQKELTGGRY 264
           V+      T        +  K E+T +G              P +N+I       T   +
Sbjct: 547 VMDRPNPPTLERVICYGKVAKIEWTSNGDNR----------SPILNYIIEYNTSFTPDTW 596

Query: 265 TILETGDLKITDVAFA------DSGEYTCFARNKLGTAQGSGSLTV--KEHTHITDQPED 316
           T+L T D+  TD+++       ++  Y   A NK+G +  SG   V   E +     P+ 
Sbjct: 597 TLL-TEDVPGTDLSWVVNTTPWNNYTYRVIAVNKVGRSLPSGHSEVCSTETSVPYKCPDG 655

Query: 317 YEVEAGQ--SATFRCNAVSD-----PSLKLSIVWLRG---------------SEPIDFES 354
            E E  +  +   + N ++      P     + W R                      E 
Sbjct: 656 VEAEGTEPNNLVIKWNPMAQVDHNAPGFHYRVYWRRNIPSGTWSSVDVRDWRQSSYTVEG 715

Query: 355 EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVI 414
            P F + +   + V    E +SG +     +  D            PL+AP+NFTLIQV 
Sbjct: 716 LPTFTEYHIKVIAVNDRGEANSGPWEKYVYSGED-----------KPLDAPTNFTLIQVT 764

Query: 415 DAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
               A+VSWNPV+P+SLRGHF+GYK+QTWTE DGE ++RE+++   ++    +   VP S
Sbjct: 765 GPSTAIVSWNPVTPESLRGHFKGYKIQTWTEADGEENLREVLIT-ADAKQALITVLVPDS 823

Query: 475 KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
            N+AR+LA+NG YNGP S  ISF TPEGVP T+QSLEA PLGSSAF L+W +P  PNG L
Sbjct: 824 TNYARILAYNGRYNGPASTTISFDTPEGVPSTIQSLEAYPLGSSAFLLRWKRPLLPNGKL 883

Query: 535 MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
            GYKI Y+ +KGT VGP  ER P+ISDP    AKL  L+P++KYRIH+   TKAG+G +
Sbjct: 884 TGYKIYYEEIKGTTVGPRSEREPHISDPAVLEAKLGRLKPNSKYRIHVVATTKAGEGQD 942



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 144/346 (41%), Gaps = 29/346 (8%)

Query: 78  DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINA 137
           DR+SQ     +L+I      D G Y C   N  G A S S+ +       F   P     
Sbjct: 22  DRMSQQPGRGTLVITSPRDEDLGQYQCFAENEHGIATSNSVFVRKAELNSFKDGPPLTVP 81

Query: 138 AEE-ETVTFECK-ASGLPEPEIHW-VHNGKPISQAPPNPRRKVGP-NRITIENLRKSDTG 193
           A+E +     C+   G P+P ++W + N     ++  N R  + P   +   N+ + D  
Sbjct: 82  ADEGKPFKLVCQPPDGWPKPNVYWMIQNMDGGIRSINNSRMTLDPEGNLWFSNVTRDDES 141

Query: 194 N---YGCNATNSLGYVYKDVYVNVLAHAPE--ITEAP------------KDEYTVDGKTV 236
           N   Y C A++     YK +   VL    +  I+ A             K+E  + GK V
Sbjct: 142 NDFFYACAASSMFRSEYK-IGNRVLLQVKQTGISAAQNRHPPTRQYVSRKNEVALKGKQV 200

Query: 237 VLTCRVFGAPKPEVNWIHNQKELTGGRYTILET--GDLKITDVAFADSGEYTCFARNKLG 294
            L C   G P PE  W  N + +        +     LKI  V+  D+G YTC   N +G
Sbjct: 201 ELFCIYGGTPLPETVWTKNGRAIIWNDKIQQDNYGKSLKIRRVSSEDAGTYTCEVSNGVG 260

Query: 295 TAQG-SGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFE 353
            A   S +L V    + T +PE      G++A FRC A  DPS   +I+W+   +PID  
Sbjct: 261 NADSYSINLAVNAVPYFTVEPEIVNAAEGETAEFRCEAAGDPS--PNIIWIHNGKPIDQS 318

Query: 354 -SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
              PR V S +  +   K  + D+G Y C A   L ++     L V
Sbjct: 319 PRNPRRVVSTN-RIYFNKLEKGDTGNYGCNATNSLGYVYKDVFLNV 363


>gi|383863731|ref|XP_003707333.1| PREDICTED: neuroglian-like [Megachile rotundata]
          Length = 1251

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 298/486 (61%), Positives = 360/486 (74%), Gaps = 19/486 (3%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           R+EYKIGNR+LL+VI++G SASQN+H P +QYV+RK EVALR  K+EL+CI+GGTPLPQ 
Sbjct: 213 RNEYKIGNRVLLHVISSGTSASQNKHEPVKQYVSRKNEVALRGNKIELYCIYGGTPLPQI 272

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +WSK+G PI  +DRI+QGNYGKSLIIKHV F D+G+YTCE SNGVG+AKS SI+L V+A 
Sbjct: 273 VWSKNGQPIKTNDRITQGNYGKSLIIKHVNFKDEGTYTCEASNGVGDAKSNSINLQVMAV 332

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P+FT+EPE INAAE+ETV F+C ASG+P PEI W+HNGKPIS+APPNPRRKV  N I IE
Sbjct: 333 PFFTIEPEIINAAEDETVEFKCAASGVPTPEIKWIHNGKPISEAPPNPRRKVTANSIIIE 392

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
            L K DTGNYGCNATNSLGYVYKDVYVNVLA  PEI + P D  TVDGKTV +TCRVFGA
Sbjct: 393 KLTKKDTGNYGCNATNSLGYVYKDVYVNVLALEPEIIQPPADMATVDGKTVRITCRVFGA 452

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP V WI   +ELTGGRY  L++GDL+I +V F D+G YTC A NK G  + +G+L VK
Sbjct: 453 PKPAVKWIRKGQELTGGRYKTLDSGDLEIENVIFLDAGVYTCHASNKFGEVEATGNLVVK 512

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           EHT ITD+PEDYEV AG +ATFRCNAV+D SL L+I WL   +PIDFE EPRF++S DYS
Sbjct: 513 EHTRITDEPEDYEVAAGSTATFRCNAVTDSSLTLTIDWLSNGKPIDFEMEPRFIRSTDYS 572

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWN 424
           L +TK++ELDSG YTC A+TELD  +AQATL VQ VP   P     ++ ++  +A V W 
Sbjct: 573 LMITKTTELDSGTYTCVARTELDETKAQATLIVQDVP--NPPKLLSVKCME-NEASVHWT 629

Query: 425 PVSPQSLRGHFRGYKVQ---TWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS--KNFA- 478
           P+     R     Y +Q   T+T    E       ++K     TE    VP S   N+  
Sbjct: 630 PMGDN--RASILRYTIQYNTTFTPDTWE-------ISKDAVPATEQTYVVPMSPWANYTF 680

Query: 479 RVLAFN 484
           RVLA+N
Sbjct: 681 RVLAWN 686



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 115/192 (59%), Positives = 141/192 (73%)

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
           VPL+AP+NFTL Q+  +  A  SWNPV  +S+RG  +GYK+QTWTEKDGE  +RE+ +  
Sbjct: 808 VPLQAPTNFTLNQIKSSTSAQFSWNPVPEESVRGELQGYKIQTWTEKDGEKGLREIDIRG 867

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
           G  +   V KFVP SKN+ R+LA+NG Y GPPSE +SF TPEGVPGTV SLEA P+GSSA
Sbjct: 868 GNRSHALVTKFVPFSKNYVRILAYNGRYAGPPSETLSFDTPEGVPGTVLSLEAFPMGSSA 927

Query: 520 FYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYR 579
            +L W KP +PNG L GY+I Y+ V GT +GPLLER P+I+DP  TSAKLA L P TKYR
Sbjct: 928 LFLVWTKPAEPNGNLTGYRIYYELVNGTTLGPLLERKPHITDPEATSAKLAALAPDTKYR 987

Query: 580 IHLAGYTKAGDG 591
           +H+   TK G G
Sbjct: 988 VHIRATTKVGQG 999



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 159/556 (28%), Positives = 236/556 (42%), Gaps = 47/556 (8%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202
           +   C   G P P+I W  NG+PI       +   G + I I+++   D G Y C A+N 
Sbjct: 258 IELYCIYGGTPLPQIVWSKNGQPIKTNDRITQGNYGKSLI-IKHVNFKDEGTYTCEASNG 316

Query: 203 LGYVYKDVYVNVLAHA-------PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
           +G   K   +N+   A       PEI  A +DE      TV   C   G P PE+ WIHN
Sbjct: 317 VGDA-KSNSINLQVMAVPFFTIEPEIINAAEDE------TVEFKCAASGVPTPEIKWIHN 369

Query: 256 QKELTGG----RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHI 310
            K ++      R  +     + I  +   D+G Y C A N LG       + V      I
Sbjct: 370 GKPISEAPPNPRRKVT-ANSIIIEKLTKKDTGNYGCNATNSLGYVYKDVYVNVLALEPEI 428

Query: 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTK 370
              P D     G++    C     P  K ++ W+R  + +   +  R+   +   L +  
Sbjct: 429 IQPPADMATVDGKTVRITCRVFGAP--KPAVKWIRKGQEL---TGGRYKTLDSGDLEIEN 483

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQS 430
              LD+G YTC A  +   +EA   L V+            +V     A    N V+  S
Sbjct: 484 VIFLDAGVYTCHASNKFGEVEATGNLVVKEHTRITDEPEDYEVAAGSTATFRCNAVTDSS 543

Query: 431 LRGHFRGYKVQTWTEKDGEGS-IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
           L             + + E   IR    +   + TTE+D     S  +  V         
Sbjct: 544 LTLTIDWLSNGKPIDFEMEPRFIRSTDYSLMITKTTELD-----SGTYTCVARTELDETK 598

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
             + +I    P   P  + S++ +   +S   + W         ++ Y I+Y     T  
Sbjct: 599 AQATLIVQDVPN--PPKLLSVKCMENEAS---VHWTPMGDNRASILRYTIQYN----TTF 649

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY------LFYVPFK 603
            P    +   + P T    +  + P   Y   +  + K G    S +      L  VP+K
Sbjct: 650 TPDTWEISKDAVPATEQTYVVPMSPWANYTFRVLAWNKIGPSLPSPHSDVCTTLPDVPYK 709

Query: 604 NPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSEL 663
           NPDNV G+G+TP NLVISWTAMP+IEHNAP F YR+++RR   GE W  +D+ DW+++ L
Sbjct: 710 NPDNVAGKGTTPQNLVISWTAMPQIEHNAPKFMYRVYYRRDIPGEKWTIEDIQDWKKNSL 769

Query: 664 VLANQPTFQPYEIKVV 679
           V+ NQPT+Q Y+IKVV
Sbjct: 770 VVDNQPTYQRYKIKVV 785



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 168/386 (43%), Gaps = 34/386 (8%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPIN-PS--DRISQGNYGKSLI 90
           +Q +   + ++   +K   + C   G P P+  W K+G     P+  DRISQ     +L+
Sbjct: 33  EQLFQVAQAKINENDKPFLIECEAEGEPAPRYRWIKNGKNFEWPAYDDRISQQPGRGTLV 92

Query: 91  IKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECK- 148
           I      D G Y C   N  G A S S+ +       F  E P  ++A E +     C+ 
Sbjct: 93  ISRPRDEDLGQYQCFAENEWGTATSNSVFVRKAELNSFKDENPISLDANEGQPFKLTCQP 152

Query: 149 ASGLPEPEIHW-VHNGKPISQAPPNPRRKVGP-NRITIENLRKSDTGN---YGCNATNSL 203
             G P+P ++W + N     ++  N R  + P   +   N+ + D  +   Y C AT+  
Sbjct: 153 PDGWPKPNVYWMIQNIAGSIKSINNSRMTLDPEGNLWFSNVTRYDASDDFYYACAATSLY 212

Query: 204 GYVYK---DVYVNVLAHAPEITE----------APKDEYTVDGKTVVLTCRVFGAPKPEV 250
              YK    V ++V++     ++          + K+E  + G  + L C   G P P++
Sbjct: 213 RNEYKIGNRVLLHVISSGTSASQNKHEPVKQYVSRKNEVALRGNKIELYCIYGGTPLPQI 272

Query: 251 NWIHNQKEL-TGGRYTILETG-DLKITDVAFADSGEYTCFARNKLGTAQG-SGSLTVKEH 307
            W  N + + T  R T    G  L I  V F D G YTC A N +G A+  S +L V   
Sbjct: 273 VWSKNGQPIKTNDRITQGNYGKSLIIKHVNFKDEGTYTCEASNGVGDAKSNSINLQVMAV 332

Query: 308 THITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP---RFVQSNDY 364
              T +PE       ++  F+C A   P+ +  I W+   +PI  E+ P   R V +N  
Sbjct: 333 PFFTIEPEIINAAEDETVEFKCAASGVPTPE--IKWIHNGKPIS-EAPPNPRRKVTAN-- 387

Query: 365 SLTVTKSSELDSGQYTCRAQTELDFI 390
           S+ + K ++ D+G Y C A   L ++
Sbjct: 388 SIIIEKLTKKDTGNYGCNATNSLGYV 413



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 37/63 (58%), Positives = 46/63 (73%)

Query: 679 VQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           +QTWTEKDGE  +RE+ +  G  +   V KFVP SKN+ R+LA+NG Y GPPSE +SF T
Sbjct: 848 IQTWTEKDGEKGLREIDIRGGNRSHALVTKFVPFSKNYVRILAYNGRYAGPPSETLSFDT 907

Query: 739 PEG 741
           PEG
Sbjct: 908 PEG 910


>gi|332019316|gb|EGI59823.1| Neuroglian [Acromyrmex echinatior]
          Length = 1291

 Score =  578 bits (1489), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 342/756 (45%), Positives = 443/756 (58%), Gaps = 78/756 (10%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           R+EYK+GN++LLNVI+TG S+ QN++AP++QYVTRK E+A+R KKVEL+CIFGGTPLPQ 
Sbjct: 253 RNEYKVGNKVLLNVISTGASSGQNKYAPERQYVTRKNEIAMRGKKVELYCIFGGTPLPQM 312

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +WSK+G  I PSDRI QGNYGKSLIIKHV F DQG YTCE SNGV +A+SYSI+L V+A+
Sbjct: 313 VWSKNGQMIKPSDRIIQGNYGKSLIIKHVNFEDQGQYTCEASNGVDQAQSYSINLQVMAS 372

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYF VEPEF+NAAE+ET    C+ASG+P PEI W+ NGKPIS+AP N RRKV  N I IE
Sbjct: 373 PYFIVEPEFVNAAEDETAEIRCEASGVPVPEIKWIRNGKPISEAPENKRRKVTSNSIIIE 432

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
            L K+DT NYGCNATNS GYVYKDV++NVLA AP+IT+ P +  +VD KT+ +TCRVFGA
Sbjct: 433 RLVKNDTANYGCNATNSFGYVYKDVFINVLALAPDITQPPMNLSSVDSKTIRITCRVFGA 492

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKPEV WI N +ELTGGRY IL+ GDL+I +V F D+G YTC+A+NKLG    S  L VK
Sbjct: 493 PKPEVKWIRNGQELTGGRYKILDVGDLEIENVIFLDAGTYTCYAKNKLGEVNASAILMVK 552

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           EHT ITD PEDYEV AG +ATFRCNAV+DP+L L+I WL   +PIDFE EPRFV+S+DYS
Sbjct: 553 EHTRITDVPEDYEVAAGSTATFRCNAVTDPTLPLTIDWLSNGQPIDFEMEPRFVRSSDYS 612

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQV-IDAKKAVVSWN 424
           L +TK++ELDSG YTC A+T+LD   AQATL VQ   + P+   LI +   +  A+V W 
Sbjct: 613 LLITKTTELDSGIYTCVARTDLDETSAQATLIVQ---DVPNAPRLISIKCQSNSAIVQWI 669

Query: 425 PVSPQSLRGHFRGYKVQ---TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 481
           P+     R     Y +Q   T+T    E +  ++        T EV     A+  F RVL
Sbjct: 670 PMGDN--RSPILRYTIQYNTTFTPDTWEIAHDQV---PATDQTYEVPMSPWANYTF-RVL 723

Query: 482 AFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVKPEQ--PNGVL 534
           A+N      PS      T     P   P  V      P       + W    Q   NG  
Sbjct: 724 AWNKIGTSLPSSHSDVCTTLPDLPNKNPDNVVGKGTTP---QNLVISWTVMSQIEHNGAK 780

Query: 535 MGYKIKY-QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-- 591
             Y+I Y + ++G            I D    +  +       +YRI +    + G+   
Sbjct: 781 FEYRIFYRRDIRGEDW-----ITNNIHDWRKNTLVVENQPTYQRYRIKVVAINEKGECRV 835

Query: 592 AESKYLFY----VPFKNPDNVE-GRGSTPNNLVISWTAMPEIEHNAPHFKYRI-FWRRHN 645
              + + Y    VP + P N    +  +  +  + W+ +PE         Y+I  W   +
Sbjct: 836 PAKEVIGYSGEDVPLQAPGNFTVDKPISGTSAYVRWSPVPEDSVRGELVGYKIQTWTERD 895

Query: 646 TGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTE 705
             +   + D+    ++E ++     F PY             +  +R L+ N        
Sbjct: 896 GEKGMREIDIRGGNKTEALVEK---FVPY------------SKNYVRMLVYN-------- 932

Query: 706 VDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                             G YNGP SE ++F TPEG
Sbjct: 933 ------------------GRYNGPTSETLNFNTPEG 950



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 107/194 (55%), Positives = 134/194 (69%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VPL+AP NFT+ + I    A V W+PV   S+RG   GYK+QTWTE+DGE  +RE+ +  
Sbjct: 848  VPLQAPGNFTVDKPISGTSAYVRWSPVPEDSVRGELVGYKIQTWTERDGEKGMREIDIRG 907

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
            G  T   V+KFVP SKN+ R+L +NG YNGP SE ++F TPEGVPGTV  LEA P+GSSA
Sbjct: 908  GNKTEALVEKFVPYSKNYVRMLVYNGRYNGPTSETLNFNTPEGVPGTVLGLEAFPMGSSA 967

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYR 579
             YL W  P +PNG+L GY+I YQ V GTK+G LLER P ++DP   SAKLA L P T YR
Sbjct: 968  LYLAWQPPAEPNGILTGYRIYYQVVNGTKLGTLLERKPDVTDPKAKSAKLATLAPDTIYR 1027

Query: 580  IHLAGYTKAGDGAE 593
            +H+   T  G+G +
Sbjct: 1028 VHIRATTSVGEGND 1041



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 184/436 (42%), Gaps = 43/436 (9%)

Query: 2   VWQSRSEYKIGNRILLNVIATGI--SASQNRHAPK---------QQYVTRKKEVALRNKK 50
           +++SRS+Y+   R  + +I T +  +A+  +  P+         Q +   +   +  +K 
Sbjct: 30  LFKSRSKYEATMRFAVCIICTLVLGTAAVVQSPPRISKQPPTDEQLFQVARPNASENHKP 89

Query: 51  VELFCIFGGTPLPQTIWSKDGVP-INPS--DRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
             + C   G P P   W K+G P + P+  DRISQ     +L+I   +  D G Y C   
Sbjct: 90  FLIECEAEGEPAPVYHWIKNGKPFLWPAYDDRISQQPGRGTLVISRPQNEDLGQYQCFAE 149

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N  G A S S+ +       F  E P  ++A E       C+   G P+P ++W+     
Sbjct: 150 NDGGTATSNSVFVRKAELNSFKDENPIPLSATEGAPFKLTCQPPDGWPKPNVYWLIQDIA 209

Query: 166 IS-QAPPNPRRKVGP-NRITIENLRKSDTGN---YGCNATNSLGYVYK---DVYVNVLA- 216
            S ++  N R  + P   +   N+ + D  +   Y C AT+     YK    V +NV++ 
Sbjct: 210 GSIKSINNSRMTLDPEGNLWFSNVTRDDASDDFYYACAATSVFRNEYKVGNKVLLNVIST 269

Query: 217 --------HAPE---ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
                   +APE   +T   K+E  + GK V L C   G P P++ W  N + +      
Sbjct: 270 GASSGQNKYAPERQYVTR--KNEIAMRGKKVELYCIFGGTPLPQMVWSKNGQMIKPSDRI 327

Query: 266 ILET--GDLKITDVAFADSGEYTCFARNKLGTAQG-SGSLTVKEHTHITDQPEDYEVEAG 322
           I       L I  V F D G+YTC A N +  AQ  S +L V    +   +PE       
Sbjct: 328 IQGNYGKSLIIKHVNFEDQGQYTCEASNGVDQAQSYSINLQVMASPYFIVEPEFVNAAED 387

Query: 323 QSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCR 382
           ++A  RC A   P  +  I W+R  +PI    E +  +    S+ + +  + D+  Y C 
Sbjct: 388 ETAEIRCEASGVPVPE--IKWIRNGKPISEAPENKRRKVTSNSIIIERLVKNDTANYGCN 445

Query: 383 AQTELDFIEAQATLTV 398
           A     ++     + V
Sbjct: 446 ATNSFGYVYKDVFINV 461


>gi|321459544|gb|EFX70596.1| hypothetical protein DAPPUDRAFT_309386 [Daphnia pulex]
          Length = 1246

 Score =  568 bits (1463), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 340/751 (45%), Positives = 445/751 (59%), Gaps = 72/751 (9%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           R+EYK+GN++ L+VIATG +A+QNRH P  QYV+RK  VA R K +EL+C+FGGTPLPQ 
Sbjct: 218 RNEYKLGNKVYLDVIATGSAAAQNRHEPVSQYVSRKNAVAHRGKSIELWCVFGGTPLPQI 277

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
            W+K+G  + P+ R +  +YGK+LIIK V+  D G+Y CE SNGVG AKSYSI L VLAA
Sbjct: 278 RWTKEGAAL-PAGRTTYSSYGKTLIIKSVDSEDAGNYECEASNGVGLAKSYSISLQVLAA 336

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFTVEPE    AE+E   F C+A+G P PEI W+HNGKPI +A  NPRRKV PNRI IE
Sbjct: 337 PYFTVEPEVYVGAEDELAEFRCEANGSPAPEIKWIHNGKPIEEAAVNPRRKVFPNRIVIE 396

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
            L+KSDTGNYGCNATNS+GYVYKDVY+NVLA AP+I +AP D  TVDG  V LTC+VFG+
Sbjct: 397 RLQKSDTGNYGCNATNSIGYVYKDVYLNVLALAPDIEDAPDDTATVDGSAVNLTCKVFGS 456

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP V WI +  ELTGGRY ++++GDL+I DV F D+G Y+C A NK G+A  +G+L VK
Sbjct: 457 PKPLVKWIRDGLELTGGRYRVMDSGDLEIRDVTFTDAGVYSCHATNKFGSANANGTLIVK 516

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           E T I D PEDYEV AGQ+ATFRCNAV+D SL L+I WL   + IDFE EPRFVQS D S
Sbjct: 517 ERTVIRDGPEDYEVAAGQTATFRCNAVADSSLNLTIEWLHADQLIDFEQEPRFVQSQDSS 576

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQV-IDAKKAVVSWN 424
           LT+TK++ELD+G YTCRA+T LD  E +ATL VQ   + P+   ++ +  + + A + W 
Sbjct: 577 LTITKTTELDTGDYTCRAKTILDLAEDKATLIVQ---DVPNRPRMVGIQCNNRDAAIEWT 633

Query: 425 PVSPQSLRGHFRGYKVQ---TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 481
           P      R     Y +Q   ++T    E S      N   + T    +  P S    RV+
Sbjct: 634 PSGDN--RAPILTYTIQFNTSFTPDSWEVSFE----NVPATETRFKVEMSPWSNYTFRVI 687

Query: 482 AFNGAYNGPPSEIISFV-TPEGVPG-TVQSLEAIPLGSSAFYLKW-VKPE-QPNGVLMGY 537
           A N      PS+  S   TP  VP     ++E      +   + W   PE + NG    Y
Sbjct: 688 ARNKIGPSLPSDHSSMCTTPPDVPNKNPDNVEGRGTSPTNLVVTWNPMPEIEHNGRNFHY 747

Query: 538 KIKY-QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG--AES 594
           ++ + + + G         +  ISD   +S  +       +YRI +  + + G+   A  
Sbjct: 748 RVYWRRDIPGEDWN-----IEMISDWRQSSILIPNQPTFKRYRIKVVAFNQIGEANVAAQ 802

Query: 595 KYLFY----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
           +   Y    VP + P N      T N ++   +A+             + W         
Sbjct: 803 EVTGYSGEDVPLEAPSNF-----TLNQIIDERSAI-------------LSW------NPV 838

Query: 651 NQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFV 710
           N D V            Q  F+ Y+I   +TWTEK+GE   RE+I N  ++    V+KFV
Sbjct: 839 NPDSV------------QGHFKGYKI---ETWTEKEGEIRAREMISNASKAF---VNKFV 880

Query: 711 PASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
           P + N  RV   N AY GP S+++SF TPEG
Sbjct: 881 PHTVNLVRVRVINSAYRGPASDVLSFKTPEG 911



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 116/194 (59%), Positives = 146/194 (75%), Gaps = 3/194 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VPLEAPSNFTL Q+ID + A++SWNPV+P S++GHF+GYK++TWTEK+GE   RE+I N 
Sbjct: 812  VPLEAPSNFTLNQIIDERSAILSWNPVNPDSVQGHFKGYKIETWTEKEGEIRAREMISNA 871

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             ++    V+KFVP + N  RV   N AY GP S+++SF TPEG PG V   EA PLGSSA
Sbjct: 872  SKAF---VNKFVPHTVNLVRVRVINSAYRGPASDVLSFKTPEGRPGPVDYFEAAPLGSSA 928

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYR 579
            FYL W +PE+PNG L GYKI Y+ V+GTK+GP +ER P I DPT T AKLAGLEP+TKYR
Sbjct: 929  FYLIWKQPEEPNGNLRGYKIFYEKVEGTKIGPQIEREPPIRDPTQTRAKLAGLEPNTKYR 988

Query: 580  IHLAGYTKAGDGAE 593
            +H+   T AG+G +
Sbjct: 989  LHIKAMTIAGEGDD 1002



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 158/375 (42%), Gaps = 39/375 (10%)

Query: 55  CIFGGTPLPQTIWSKDGVPI---NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVG 111
           C   G P P+  W K+G      +  DRISQ     +L+I      D G Y C  SN  G
Sbjct: 59  CEAEGEPAPKYRWVKNGFDFLWQSYDDRISQQPGRGTLVITTPRDEDIGQYQCFASNEWG 118

Query: 112 EAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECK-ASGLPEPEIHWVHNGKPISQA 169
            A S S+ +       F  EP   ++A E    +  C+   G P+P ++W      + Q 
Sbjct: 119 TATSNSVFVRKSDLNSFKDEPPMTVSAQEGSPFSLRCQPPDGWPKPSVYW------MMQN 172

Query: 170 PPNPRRKVGPNRITIE--------NLRKSDTGN---YGCNATNSLGYVYK---DVYVNVL 215
                R +  +R+T++        N+ + DT +   Y C+AT+     YK    VY++V+
Sbjct: 173 SNGALRSINSSRMTVDPEGTLWFSNVTREDTSDDFVYACSATSLFRNEYKLGNKVYLDVI 232

Query: 216 A---HAPEITEAPKDEYTV-------DGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           A    A +    P  +Y          GK++ L C   G P P++ W      L  GR T
Sbjct: 233 ATGSAAAQNRHEPVSQYVSRKNAVAHRGKSIELWCVFGGTPLPQIRWTKEGAALPAGRTT 292

Query: 266 ILETGD-LKITDVAFADSGEYTCFARNKLGTAQG-SGSLTVKEHTHITDQPEDYEVEAGQ 323
               G  L I  V   D+G Y C A N +G A+  S SL V    + T +PE Y     +
Sbjct: 293 YSSYGKTLIIKSVDSEDAGNYECEASNGVGLAKSYSISLQVLAAPYFTVEPEVYVGAEDE 352

Query: 324 SATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            A FRC A   P+ +  I W+   +PI+  +     +     + + +  + D+G Y C A
Sbjct: 353 LAEFRCEANGSPAPE--IKWIHNGKPIEEAAVNPRRKVFPNRIVIERLQKSDTGNYGCNA 410

Query: 384 QTELDFIEAQATLTV 398
              + ++     L V
Sbjct: 411 TNSIGYVYKDVYLNV 425



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 61/157 (38%), Gaps = 12/157 (7%)

Query: 145 FECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR--ITIENLRKSDTGNYGCNATNS 202
            EC+A G P P+  WV NG        + R    P R  + I   R  D G Y C A+N 
Sbjct: 57  IECEAEGEPAPKYRWVKNGFDFLWQSYDDRISQQPGRGTLVITTPRDEDIGQYQCFASNE 116

Query: 203 LGYVYKD-VYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR-VFGAPKPEVNWIHNQ---- 256
            G    + V+V          E P      +G    L C+   G PKP V W+       
Sbjct: 117 WGTATSNSVFVRKSDLNSFKDEPPMTVSAQEGSPFSLRCQPPDGWPKPSVYWMMQNSNGA 176

Query: 257 -KELTGGRYTILETGDLKITDVAFADSGE---YTCFA 289
            + +   R T+   G L  ++V   D+ +   Y C A
Sbjct: 177 LRSINSSRMTVDPEGTLWFSNVTREDTSDDFVYACSA 213



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 8/118 (6%)

Query: 234 KTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILET-----GDLKITDVAFADSGEYTCF 288
           K  ++ C   G P P+  W+ N  +     Y    +     G L IT     D G+Y CF
Sbjct: 53  KPFIIECEAEGEPAPKYRWVKNGFDFLWQSYDDRISQQPGRGTLVITTPRDEDIGQYQCF 112

Query: 289 ARNKLGTAQGSGSLTVKE--HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWL 344
           A N+ GTA  +     K   ++   + P     + G   + RC    D   K S+ W+
Sbjct: 113 ASNEWGTATSNSVFVRKSDLNSFKDEPPMTVSAQEGSPFSLRCQP-PDGWPKPSVYWM 169


>gi|195448218|ref|XP_002071561.1| GK25863 [Drosophila willistoni]
 gi|194167646|gb|EDW82547.1| GK25863 [Drosophila willistoni]
          Length = 1304

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 263/420 (62%), Positives = 320/420 (76%), Gaps = 2/420 (0%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           R+EYKIGN++LL+V   G+SASQN+H PK+QYVTRK EVALR K+VEL+CIFGGTPLPQT
Sbjct: 218 RNEYKIGNKVLLDVKQMGVSASQNKHQPKRQYVTRKNEVALRGKRVELYCIFGGTPLPQT 277

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +WSKDG PI  SDRI+QG+YGKSL+I+     D+G+YTC+VSNGVG A+SYSI+L + A 
Sbjct: 278 VWSKDGHPIQWSDRITQGHYGKSLVIRQANRDDEGAYTCDVSNGVGNAQSYSINLKINAI 337

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFT EP+F NAAE+E V F CKA+G PEP I W+HNGKPI+Q+PPNPRR V  N I I 
Sbjct: 338 PYFTEEPDFQNAAEDEEVVFNCKAAGFPEPTIQWIHNGKPIAQSPPNPRRTVTNNFIKIV 397

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
            L K+DTGNYGCNATNSLGYVYKDVY+NVLA  PEI EAP+DE TVDG+ + + CRVFGA
Sbjct: 398 QLTKADTGNYGCNATNSLGYVYKDVYLNVLALPPEIQEAPRDESTVDGRNITMRCRVFGA 457

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP+V W+H +K LTGGRY +L  GDL I  V F D+G+YTCFA NK G     GSL VK
Sbjct: 458 PKPQVKWLHGRKWLTGGRYNVLPNGDLSIDAVTFPDAGKYTCFAINKFGNKTAEGSLEVK 517

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           EHT IT +P++YEV AGQSATFRCN   D +L+L I W +  + IDF++E RFV++ND S
Sbjct: 518 EHTRITQEPQNYEVAAGQSATFRCNEAHDDTLELEIEWWKDGQAIDFDAEARFVKTNDNS 577

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           LT+ K+ ELDSG+YTC A+T+LD   A+A L VQ    AP    +     A KA + W P
Sbjct: 578 LTIAKTMELDSGEYTCVARTKLDEATAKANLIVQDVPNAPRLLGI--SCQADKAEIRWEP 635



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 125/252 (49%), Positives = 159/252 (63%), Gaps = 21/252 (8%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            PLEAP+NF++ QV  A  A + WNPVSP+S+RGHF+GYK+QTWTEK+GE  +RE+ V KG
Sbjct: 814  PLEAPTNFSMRQVTTATTAYMRWNPVSPESVRGHFKGYKIQTWTEKEGEEGLREIHV-KG 872

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
            +S    V +F   SKNFARVLA+NG +NGP S +I F TPEGVP  VQSL+A PLGSSAF
Sbjct: 873  DSNEALVTQFKADSKNFARVLAYNGRFNGPASAVIDFDTPEGVPSPVQSLDAYPLGSSAF 932

Query: 521  YLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRI 580
            +L W KP  PNG L GYKI ++ VKG+ V    E    I DP TT AK+ G +P+TKYRI
Sbjct: 933  FLTWKKPLSPNGKLTGYKIYHEEVKGSYVSERQEYRKVIDDPRTTRAKIVGFKPNTKYRI 992

Query: 581  HLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLV-----ISWTAMPEIEHNAPHF 635
             +   TK G+GA             + +E R  +  NL+      +W  +P     A   
Sbjct: 993  TIVATTKMGEGAV------------NYIEKRTLSDANLLPAPPTFTWEQLPSDNGLA--- 1037

Query: 636  KYRIFWRRHNTG 647
            KYRI W+ +  G
Sbjct: 1038 KYRINWQPNTEG 1049



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 156/601 (25%), Positives = 245/601 (40%), Gaps = 67/601 (11%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202
           V   C   G P P+  W  +G PI  +    +   G + + I    + D G Y C+ +N 
Sbjct: 263 VELYCIFGGTPLPQTVWSKDGHPIQWSDRITQGHYGKS-LVIRQANRDDEGAYTCDVSNG 321

Query: 203 LGYVYKDVYVNVLAHA-PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG 261
           +G   +   +N+  +A P  TE P  +   + + VV  C+  G P+P + WIHN K +  
Sbjct: 322 VGNA-QSYSINLKINAIPYFTEEPDFQNAAEDEEVVFNCKAAGFPEPTIQWIHNGKPIAQ 380

Query: 262 G----RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPED 316
                R T+     +KI  +  AD+G Y C A N LG       L V      I + P D
Sbjct: 381 SPPNPRRTVTNNF-IKIVQLTKADTGNYGCNATNSLGYVYKDVYLNVLALPPEIQEAPRD 439

Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
                G++ T RC     P  K  + WL G +   + +  R+    +  L++   +  D+
Sbjct: 440 ESTVDGRNITMRCRVFGAP--KPQVKWLHGRK---WLTGGRYNVLPNGDLSIDAVTFPDA 494

Query: 377 GQYTCRAQTELDFIEAQATLTVQVPL---EAPSNFTLIQVIDAKKAVVSWNPVSPQSLRG 433
           G+YTC A  +     A+ +L V+      + P N+   +V   + A    N     +L  
Sbjct: 495 GKYTCFAINKFGNKTAEGSLEVKEHTRITQEPQNY---EVAAGQSATFRCNEAHDDTLEL 551

Query: 434 HFRGYKVQTWTEKDGEGSI-----------RELIVNKGESTTTEVDKFVPASKNFARVLA 482
               +K     + D E              + + ++ GE T     K   A+     ++ 
Sbjct: 552 EIEWWKDGQAIDFDAEARFVKTNDNSLTIAKTMELDSGEYTCVARTKLDEATAKANLIV- 610

Query: 483 FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
                             + VP   + L  I   +    ++W         ++ Y I++ 
Sbjct: 611 ------------------QDVPNAPRLL-GISCQADKAEIRWEPQGDNRSPILHYTIQFN 651

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY--- 599
               T   P      Y   P+T  + +  + P   Y   +  + K G    S +      
Sbjct: 652 ----TSFTPASWDTAYEKVPSTDFSFVVQMSPWANYTFRVIAFNKIGPSPPSGHSEACTT 707

Query: 600 ---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVL 656
              VPFKNPDNV G+G+ P NLVISWT MPEIEHN P F YR++W+R      W   ++ 
Sbjct: 708 QPAVPFKNPDNVVGQGTEPTNLVISWTPMPEIEHNGPKFHYRVYWKRDIAAAPWQSKEID 767

Query: 657 DWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 716
           DW Q+ +V+ +QPTF  Y IKV           S  E++   GE      D+ + A  NF
Sbjct: 768 DWHQNNIVITDQPTFVKYHIKVAAINGNGASNVSPEEIVGYSGE------DRPLEAPTNF 821

Query: 717 A 717
           +
Sbjct: 822 S 822



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 101/397 (25%), Positives = 167/397 (42%), Gaps = 53/397 (13%)

Query: 43  EVALRNKKVE----LFCIFGGTPLPQTIWSKDGVPIN---PSDRISQGNYGKSLIIKHVE 95
           +VA +NK+ +    + C   G P P+  W K+G   +     +R+ +     +L+I   +
Sbjct: 42  KVAQQNKESDKPFIIECEADGQPEPEYSWIKNGKKFDWQAYDNRMLRQPGRGTLVITSPK 101

Query: 96  FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECKA-SGLP 153
             D G Y C  SN  G A S S+ +       F  E  + + A E E  + +C+A  G P
Sbjct: 102 DEDLGQYQCFASNEFGIATSNSVFVRKAELNAFKDEAAKTVEAVEGEPFSLQCEAPDGWP 161

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--------NLRKSDTGN---YGCNATNS 202
           +P ++W+     I Q+     + +  +R+T++        NL + D  +   Y C+AT+ 
Sbjct: 162 KPTVNWL-----IQQSIDGGIKSINNSRMTLDPEGTLWFSNLTRDDASDDFYYACSATSV 216

Query: 203 LGYVYK---DVYVNVL---AHAPEITEAPKDEY-------TVDGKTVVLTCRVFGAPKPE 249
               YK    V ++V      A +    PK +Y        + GK V L C   G P P+
Sbjct: 217 FRNEYKIGNKVLLDVKQMGVSASQNKHQPKRQYVTRKNEVALRGKRVELYCIFGGTPLPQ 276

Query: 250 VNW------IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG-SGSL 302
             W      I     +T G Y       L I      D G YTC   N +G AQ  S +L
Sbjct: 277 TVWSKDGHPIQWSDRITQGHY----GKSLVIRQANRDDEGAYTCDVSNGVGNAQSYSINL 332

Query: 303 TVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPI-DFESEPRFVQS 361
            +    + T++P+       +   F C A   P  + +I W+   +PI      PR   +
Sbjct: 333 KINAIPYFTEEPDFQNAAEDEEVVFNCKAAGFP--EPTIQWIHNGKPIAQSPPNPRRTVT 390

Query: 362 NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           N++ + + + ++ D+G Y C A   L ++     L V
Sbjct: 391 NNF-IKIVQLTKADTGNYGCNATNSLGYVYKDVYLNV 426



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 50/71 (70%), Gaps = 4/71 (5%)

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
           F+ Y+I   QTWTEK+GE  +RE+ V KG+S    V +F   SKNFARVLA+NG +NGP 
Sbjct: 848 FKGYKI---QTWTEKEGEEGLREIHV-KGDSNEALVTQFKADSKNFARVLAYNGRFNGPA 903

Query: 731 SEIISFVTPEG 741
           S +I F TPEG
Sbjct: 904 SAVIDFDTPEG 914


>gi|195393480|ref|XP_002055382.1| GJ18818 [Drosophila virilis]
 gi|194149892|gb|EDW65583.1| GJ18818 [Drosophila virilis]
          Length = 1292

 Score =  547 bits (1409), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 262/421 (62%), Positives = 320/421 (76%), Gaps = 4/421 (0%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           R+EYKIGN+ILL+V   G+SASQNR+ PK+QYVTRK EVALR K+VELFCI+GGTPLPQT
Sbjct: 218 RNEYKIGNKILLDVKQMGVSASQNRYPPKRQYVTRKNEVALRGKRVELFCIYGGTPLPQT 277

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +W KDG  +  +DRI+QGNYGKSL+I+   F D+G+Y C+VSNGV +A+SYSI+L + A 
Sbjct: 278 VWYKDGKRVEWNDRITQGNYGKSLVIRQANFDDEGTYNCDVSNGVDQAQSYSINLKIHAI 337

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFT EPE  NAAE+E V F CKA+G PEP I W+HNGKPI+Q+ PNPRR V  N I I 
Sbjct: 338 PYFTEEPEIQNAAEDEEVIFNCKAAGHPEPTIQWIHNGKPIAQSEPNPRRTVTNNYIKIV 397

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
           NL K DTGNYGCNATNSLGYVYKDVY+NVLA  PEI E P+ E TV+G+ + + CRVFGA
Sbjct: 398 NLVKKDTGNYGCNATNSLGYVYKDVYLNVLALPPEIQEPPRAEATVNGRNITMRCRVFGA 457

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP+V W HN   LTGGRY +L +GDL+I +V FAD+G YTC A NK G A   GSL VK
Sbjct: 458 PKPQVKWRHNNNWLTGGRYNVLPSGDLEIQEVTFADNGNYTCLAVNKFGNATAEGSLVVK 517

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           E T IT +P++YEV AGQSATFRCN   D +L L I WL+  +PIDF++E RFV++ND S
Sbjct: 518 ERTRITQEPQNYEVAAGQSATFRCNEAHDDTLDLEIEWLKDGQPIDFDAEARFVKTNDNS 577

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVI-DAKKAVVSWN 424
           LT+ K+ ELDSG+YTC A+T+LD   A+A L VQ   + P+   LI +I  A KA +SW 
Sbjct: 578 LTIAKTMELDSGEYTCVARTQLDEATAKANLIVQ---DVPNAPRLIGIICQADKAKISWE 634

Query: 425 P 425
           P
Sbjct: 635 P 635



 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 198/597 (33%), Positives = 289/597 (48%), Gaps = 75/597 (12%)

Query: 41   KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYG----KSLIIKHVEF 96
            + E  +  + + + C   G P PQ  W  +      ++ ++ G Y       L I+ V F
Sbjct: 438  RAEATVNGRNITMRCRVFGAPKPQVKWRHN------NNWLTGGRYNVLPSGDLEIQEVTF 491

Query: 97   SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKAS--GLPE 154
            +D G+YTC   N  G A +    L V      T EP+    A  ++ TF C  +     +
Sbjct: 492  ADNGNYTCLAVNKFGNATAEG-SLVVKERTRITQEPQNYEVAAGQSATFRCNEAHDDTLD 550

Query: 155  PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSL--GYVYKDVYV 212
             EI W+ +G+PI         K   N +TI    + D+G Y C A   L       ++ V
Sbjct: 551  LEIEWLKDGQPIDFDAEARFVKTNDNSLTIAKTMELDSGEYTCVARTQLDEATAKANLIV 610

Query: 213  NVLAHAPE----ITEAPKDEYTV----DGKTVVLTCRV-FGAPKPEVNWIHNQKELTGGR 263
              + +AP     I +A K + +     D ++ +L   + F       +W    +++    
Sbjct: 611  QDVPNAPRLIGIICQADKAKISWEPQGDNRSPILHYTIQFNTSFTPASWDTAYEKVPSTD 670

Query: 264  YTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSG-SLTVKEHTHITDQPEDYEVEAG 322
            ++ +    L+++  A   +  Y   A NK+G +  SG S        +  +  D  V  G
Sbjct: 671  FSFV----LQMSPWA---NYTYRVIAFNKIGPSPPSGHSEACTTQPDVPYKNPDNVVGQG 723

Query: 323  QSAT-----------FRCNAVSDPSLKLSIVWLRGSEPIDFES---------------EP 356
               T              NA   P+ +  + W R      +E+               +P
Sbjct: 724  TEPTNLVITWTPMPEIEHNA---PNFQYRVSWKRDIPAATWENKDIYDWRQNNLLIPDQP 780

Query: 357  RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDA 416
             FV+   Y + V   +E        R ++ +D  E         PLEAP+NF++ QV  A
Sbjct: 781  TFVK---YHIKVVAINE--------RGESNVDAEEVIGYSGEDRPLEAPTNFSMQQVTSA 829

Query: 417  KKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
              A V WNPVSP+S+RGHF+GYK+QTWT+K+GE  +RE+   +  +  T+   F P SKN
Sbjct: 830  THAYVGWNPVSPESVRGHFKGYKIQTWTDKEGEEGLREIHTIQNGALVTQ---FKPDSKN 886

Query: 477  FARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMG 536
            +ARVLA+NG +NGPPS +I F TPEGVP +VQSLEA PLGSSAF+L W KP  PNG L G
Sbjct: 887  YARVLAYNGRFNGPPSAVIDFDTPEGVPSSVQSLEAYPLGSSAFWLTWKKPLNPNGKLTG 946

Query: 537  YKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
            YKI Y+ VKG+ VG   E  P+I+DP  T  K+AGL+P TKYRI +   TK G+G E
Sbjct: 947  YKIYYEVVKGSYVGERREYEPHITDPRITRMKMAGLKPKTKYRISITATTKMGEGTE 1003



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 158/610 (25%), Positives = 245/610 (40%), Gaps = 61/610 (10%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS---------DTG 193
           V   C   G P P+  W  +GK +             +RIT  N  KS         D G
Sbjct: 263 VELFCIYGGTPLPQTVWYKDGKRVEWN----------DRITQGNYGKSLVIRQANFDDEG 312

Query: 194 NYGCNATNSLGYVYKDVYVNVLAHA-PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNW 252
            Y C+ +N +    +   +N+  HA P  TE P+ +   + + V+  C+  G P+P + W
Sbjct: 313 TYNCDVSNGVDQA-QSYSINLKIHAIPYFTEEPEIQNAAEDEEVIFNCKAAGHPEPTIQW 371

Query: 253 IHNQKELTGG----RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT 308
           IHN K +       R T+     +KI ++   D+G Y C A N LG       L V    
Sbjct: 372 IHNGKPIAQSEPNPRRTVTNNY-IKIVNLVKKDTGNYGCNATNSLGYVYKDVYLNVLALP 430

Query: 309 -HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
             I + P       G++ T RC     P  K  + W   +   ++ +  R+       L 
Sbjct: 431 PEIQEPPRAEATVNGRNITMRCRVFGAP--KPQVKWRHNN---NWLTGGRYNVLPSGDLE 485

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPL---EAPSNFTLIQVIDAKKAVVSWN 424
           + + +  D+G YTC A  +     A+ +L V+      + P N+   +V   + A    N
Sbjct: 486 IQEVTFADNGNYTCLAVNKFGNATAEGSLVVKERTRITQEPQNY---EVAAGQSATFRCN 542

Query: 425 PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN 484
                +L       K     + D E       V   +++ T        S  +  V    
Sbjct: 543 EAHDDTLDLEIEWLKDGQPIDFDAEARF----VKTNDNSLTIAKTMELDSGEYTCVARTQ 598

Query: 485 GAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
                  + +I     + VP   + +  I     A  + W         ++ Y I++   
Sbjct: 599 LDEATAKANLIV----QDVPNAPRLIGIICQADKA-KISWEPQGDNRSPILHYTIQFN-- 651

Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY----- 599
             T   P      Y   P+T  + +  + P   Y   +  + K G    S +        
Sbjct: 652 --TSFTPASWDTAYEKVPSTDFSFVLQMSPWANYTYRVIAFNKIGPSPPSGHSEACTTQP 709

Query: 600 -VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDW 658
            VP+KNPDNV G+G+ P NLVI+WT MPEIEHNAP+F+YR+ W+R      W   D+ DW
Sbjct: 710 DVPYKNPDNVVGQGTEPTNLVITWTPMPEIEHNAPNFQYRVSWKRDIPAATWENKDIYDW 769

Query: 659 RQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR 718
           RQ+ L++ +QPTF  Y IKVV      +      E+I   GE    E     P + +  +
Sbjct: 770 RQNNLLIPDQPTFVKYHIKVVAINERGESNVDAEEVIGYSGEDRPLE----APTNFSMQQ 825

Query: 719 VLAFNGAYNG 728
           V +   AY G
Sbjct: 826 VTSATHAYVG 835



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 164/398 (41%), Gaps = 55/398 (13%)

Query: 43  EVALRNKKVE----LFCIFGGTPLPQTIWSKDGVPIN---PSDRISQGNYGKSLIIKHVE 95
           +VA +NK+ +    + C   G P P+  W K+G   +     +R+ +     +L+I   +
Sbjct: 42  KVAQQNKESDKPFIIECEADGQPEPEYRWIKNGKKFDWQAYDNRMLRQPGRGTLVITSPK 101

Query: 96  FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECKA-SGLP 153
             D G Y C  SN  G A S S+ +       F  E    + A E E  + +C+A  G P
Sbjct: 102 DEDLGQYQCFASNEFGVATSNSVFVRKAELNAFKDEAARSVEAVEGEPFSLQCEAPDGWP 161

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--------NLRKSDTGN---YGCNATNS 202
           +P ++W+     I Q      + +  +R+T++        N+ + D      Y C+AT+ 
Sbjct: 162 KPTVNWL-----IQQTIDAGIKSINNSRMTLDPEGTLWFSNVTRDDASGDFWYACSATSV 216

Query: 203 LGYVYK---DVYVNVLAHAPEITE----------APKDEYTVDGKTVVLTCRVFGAPKPE 249
               YK    + ++V       ++            K+E  + GK V L C   G P P+
Sbjct: 217 FRNEYKIGNKILLDVKQMGVSASQNRYPPKRQYVTRKNEVALRGKRVELFCIYGGTPLPQ 276

Query: 250 VNWIHNQK------ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLT 303
             W  + K       +T G Y       L I    F D G Y C   N +  AQ S S+ 
Sbjct: 277 TVWYKDGKRVEWNDRITQGNY----GKSLVIRQANFDDEGTYNCDVSNGVDQAQ-SYSIN 331

Query: 304 VKEHT--HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPI-DFESEPRFVQ 360
           +K H   + T++PE       +   F C A   P  + +I W+   +PI   E  PR   
Sbjct: 332 LKIHAIPYFTEEPEIQNAAEDEEVIFNCKAAGHP--EPTIQWIHNGKPIAQSEPNPRRTV 389

Query: 361 SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           +N+Y + +    + D+G Y C A   L ++     L V
Sbjct: 390 TNNY-IKIVNLVKKDTGNYGCNATNSLGYVYKDVYLNV 426



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 3/63 (4%)

Query: 679 VQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           +QTWT+K+GE  +RE+   +  +  T+   F P SKN+ARVLA+NG +NGPPS +I F T
Sbjct: 853 IQTWTDKEGEEGLREIHTIQNGALVTQ---FKPDSKNYARVLAYNGRFNGPPSAVIDFDT 909

Query: 739 PEG 741
           PEG
Sbjct: 910 PEG 912



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 118/298 (39%), Gaps = 27/298 (9%)

Query: 136 NAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPR--RKVGPNRITIENLRKSDTG 193
           N   ++    EC+A G PEPE  W+ NGK       + R  R+ G   + I + +  D G
Sbjct: 47  NKESDKPFIIECEADGQPEPEYRWIKNGKKFDWQAYDNRMLRQPGRGTLVITSPKDEDLG 106

Query: 194 NYGCNATNSLGYVYKD-VYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRV-FGAPKPEVN 251
            Y C A+N  G    + V+V          EA +    V+G+   L C    G PKP VN
Sbjct: 107 QYQCFASNEFGVATSNSVFVRKAELNAFKDEAARSVEAVEGEPFSLQCEAPDGWPKPTVN 166

Query: 252 WIHNQ------KELTGGRYTILETGDLKITDVAFAD-SGE--YTCFARNKLGTAQGSGSL 302
           W+  Q      K +   R T+   G L  ++V   D SG+  Y C A +        G+ 
Sbjct: 167 WLIQQTIDAGIKSINNSRMTLDPEGTLWFSNVTRDDASGDFWYACSATSVFRNEYKIGNK 226

Query: 303 TVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPI----------DF 352
            + +   +            +    R N V+    ++ +  + G  P+            
Sbjct: 227 ILLDVKQMGVSASQNRYPPKRQYVTRKNEVALRGKRVELFCIYGGTPLPQTVWYKDGKRV 286

Query: 353 ESEPRFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFT 409
           E   R  Q N   SL + +++  D G Y C     +D  +AQ + ++ + + A   FT
Sbjct: 287 EWNDRITQGNYGKSLVIRQANFDDEGTYNCDVSNGVD--QAQ-SYSINLKIHAIPYFT 341


>gi|195132305|ref|XP_002010584.1| GI16006 [Drosophila mojavensis]
 gi|193909034|gb|EDW07901.1| GI16006 [Drosophila mojavensis]
          Length = 1302

 Score =  546 bits (1407), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 260/421 (61%), Positives = 320/421 (76%), Gaps = 4/421 (0%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           R+EYKIGN+ILL+V   G+SASQNR+ PK+QYVTRK EVALR K+VEL+CI+GGTPLPQT
Sbjct: 227 RNEYKIGNKILLDVKQMGVSASQNRYPPKRQYVTRKNEVALRGKRVELYCIYGGTPLPQT 286

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +W K+G  +  +DRI+QGNYGKSL+I+   F D+G+Y+C+VSNGVG+A+SYSI+L + A 
Sbjct: 287 VWLKNGKRVEWNDRITQGNYGKSLVIRQANFDDEGTYSCDVSNGVGQAQSYSINLKIHAI 346

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFT EPE  NAAE+E V F CKA+G PEP I W+HNGKPI Q+ PNPRR V  N I I 
Sbjct: 347 PYFTEEPEIQNAAEDEEVVFNCKAAGHPEPTIQWIHNGKPIEQSEPNPRRTVTNNYIKIV 406

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
           NL K+DTGNYGCNATNSLGYVYKDVY+NVLA  PEI E P+ E TV+G+ + + CRVFGA
Sbjct: 407 NLVKNDTGNYGCNATNSLGYVYKDVYLNVLALPPEIQEPPRAEATVNGRNITMRCRVFGA 466

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP+V W HN   LTGGRYT+L +GDL+I +V FAD+G YTC A NK G     GSL VK
Sbjct: 467 PKPQVKWRHNHNWLTGGRYTVLPSGDLQIQEVTFADNGNYTCLAVNKFGNETAQGSLVVK 526

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           E T IT +P++YEV AGQSATFRCN   D +L L I WL+  +PIDF +E RFV++ND S
Sbjct: 527 ERTRITQEPQNYEVAAGQSATFRCNEAHDDTLDLEIEWLKDGQPIDFAAEARFVKTNDNS 586

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQV-IDAKKAVVSWN 424
           LT+ K+ ELDSG+YTC A+T+LD   A+A L VQ   + P+   LI +   A KA +SW 
Sbjct: 587 LTIAKTQELDSGEYTCVARTQLDEATAKANLIVQ---DVPNQPRLIGITCQADKAEISWE 643

Query: 425 P 425
           P
Sbjct: 644 P 644



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 188/593 (31%), Positives = 281/593 (47%), Gaps = 67/593 (11%)

Query: 41   KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEF 96
            + E  +  + + + C   G P PQ  W  +       + ++ G Y       L I+ V F
Sbjct: 447  RAEATVNGRNITMRCRVFGAPKPQVKWRHN------HNWLTGGRYTVLPSGDLQIQEVTF 500

Query: 97   SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKAS--GLPE 154
            +D G+YTC   N  G   +    L V      T EP+    A  ++ TF C  +     +
Sbjct: 501  ADNGNYTCLAVNKFGNETAQG-SLVVKERTRITQEPQNYEVAAGQSATFRCNEAHDDTLD 559

Query: 155  PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC-------NATNSLGYVY 207
             EI W+ +G+PI  A      K   N +TI   ++ D+G Y C        AT     + 
Sbjct: 560  LEIEWLKDGQPIDFAAEARFVKTNDNSLTIAKTQELDSGEYTCVARTQLDEATAKANLIV 619

Query: 208  KDV-------YVNVLAHAPEITEAPKDEYTVDGKTVVLTCRV-FGAPKPEVNWIHNQKEL 259
            +DV        +   A   EI+  P+     D ++ +L   + F       +W    +++
Sbjct: 620  QDVPNQPRLIGITCQADKAEISWEPQG----DNRSPILHYTIQFNTSFTPASWDTAYEKV 675

Query: 260  TGGRYTILETGDLKITDVAFADSGEYT--CFARNKLGTAQGSG---------SLTVKEHT 308
                ++ +         V  +    YT    A NK+G ++ SG          +  K   
Sbjct: 676  PSTDFSFV---------VQMSPWANYTFRVIAYNKIGPSEPSGHSDMCTTQPDVPYKNPD 726

Query: 309  HITDQ---PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
            ++  Q   P +  +          NA   P+ +  + W R      +E++  +    D  
Sbjct: 727  NVVGQGTEPNNLVISWTPMPEIEHNA---PNFQYRVSWKRDIPAAAWENKDIYNWRQDNL 783

Query: 366  LTVTKSS----ELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
            L   + +     +       + ++ +   E         PLEAP+NF++ QV  A  A V
Sbjct: 784  LIPDQPTFVKYHIKVVAINAKGESNVAAEEVIGYSGEDRPLEAPTNFSMQQVTSATTAYV 843

Query: 422  SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIREL-IVNKGESTTTEVDKFVPASKNFARV 480
             WN VS +S+RGHF+GYK+QTWT+K+GE  +RE+  ++ G   T    +F P SKN+ARV
Sbjct: 844  GWNKVSEESVRGHFKGYKIQTWTDKEGEEGMREIHTIDNGALVT----QFKPDSKNYARV 899

Query: 481  LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
            LA+NG +NGPPS +I F TPEGVP  V+SLEA PLGSSAF+L W KP  PNG L GYKI 
Sbjct: 900  LAYNGRFNGPPSAVIDFDTPEGVPSAVESLEAYPLGSSAFWLTWKKPLSPNGKLTGYKIY 959

Query: 541  YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
            Y+ VKG+ VG   E  P+I+DP  T  K+AGL+P+TKYRI +   TK G+G E
Sbjct: 960  YEVVKGSYVGERREYEPHITDPRITRMKMAGLKPNTKYRISITATTKMGEGTE 1012



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 166/619 (26%), Positives = 248/619 (40%), Gaps = 79/619 (12%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS---------DTG 193
           V   C   G P P+  W+ NGK +             +RIT  N  KS         D G
Sbjct: 272 VELYCIYGGTPLPQTVWLKNGKRVEWN----------DRITQGNYGKSLVIRQANFDDEG 321

Query: 194 NYGCNATNSLGYVYKDVYVNVLAHA-PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNW 252
            Y C+ +N +G   +   +N+  HA P  TE P+ +   + + VV  C+  G P+P + W
Sbjct: 322 TYSCDVSNGVGQA-QSYSINLKIHAIPYFTEEPEIQNAAEDEEVVFNCKAAGHPEPTIQW 380

Query: 253 IHNQKELTGG----RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT 308
           IHN K +       R T+     +KI ++   D+G Y C A N LG       L V    
Sbjct: 381 IHNGKPIEQSEPNPRRTVTNNY-IKIVNLVKNDTGNYGCNATNSLGYVYKDVYLNVLALP 439

Query: 309 -HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV----WLRGSEPIDFESEPRFVQSND 363
             I + P       G++ T RC     P  ++       WL G          R+     
Sbjct: 440 PEIQEPPRAEATVNGRNITMRCRVFGAPKPQVKWRHNHNWLTGG---------RYTVLPS 490

Query: 364 YSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPL---EAPSNFTLIQVIDAKKAV 420
             L + + +  D+G YTC A  +     AQ +L V+      + P N+   +V   + A 
Sbjct: 491 GDLQIQEVTFADNGNYTCLAVNKFGNETAQGSLVVKERTRITQEPQNY---EVAAGQSAT 547

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGE-----GSIRELIVNKGESTTTEVDKFVPASK 475
              N     +L           W  KDG+        R +  N    T  +  +      
Sbjct: 548 FRCNEAHDDTLDLEIE------WL-KDGQPIDFAAEARFVKTNDNSLTIAKTQELDSGEY 600

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
                   + A         + +  + VP   + L  I   +    + W         ++
Sbjct: 601 TCVARTQLDEA------TAKANLIVQDVPNQPR-LIGITCQADKAEISWEPQGDNRSPIL 653

Query: 536 GYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK 595
            Y I++     T   P      Y   P+T  + +  + P   Y   +  Y K G    S 
Sbjct: 654 HYTIQFN----TSFTPASWDTAYEKVPSTDFSFVVQMSPWANYTFRVIAYNKIGPSEPSG 709

Query: 596 YLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEA 649
           +         VP+KNPDNV G+G+ PNNLVISWT MPEIEHNAP+F+YR+ W+R     A
Sbjct: 710 HSDMCTTQPDVPYKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFQYRVSWKRDIPAAA 769

Query: 650 WNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKF 709
           W   D+ +WRQ  L++ +QPTF  Y IKVV    + +   +  E+I   GE    E    
Sbjct: 770 WENKDIYNWRQDNLLIPDQPTFVKYHIKVVAINAKGESNVAAEEVIGYSGEDRPLE---- 825

Query: 710 VPASKNFARVLAFNGAYNG 728
            P + +  +V +   AY G
Sbjct: 826 APTNFSMQQVTSATTAYVG 844



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 145/346 (41%), Gaps = 48/346 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFE 146
           +L+I   +  D G Y C  SN  G A S S+ +       F  E    + A E E  + +
Sbjct: 103 TLVITSPKDEDLGQYQCFASNEFGVATSNSVFVRKAELNAFKDEAARSVEAVEGEPFSLQ 162

Query: 147 CKA-SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--------NLRKSDTGN--- 194
           C+A  G P+P ++W+     I Q      + +  +R+T++        N+ + D      
Sbjct: 163 CEAPDGWPKPTVNWL-----IQQTVDAGIKSINNSRMTLDPEGTLWFSNVTREDASGDFW 217

Query: 195 YGCNATNSLGYVYK---DVYVNVLAHAPEITE----------APKDEYTVDGKTVVLTCR 241
           Y C+AT+     YK    + ++V       ++            K+E  + GK V L C 
Sbjct: 218 YACSATSVFRNEYKIGNKILLDVKQMGVSASQNRYPPKRQYVTRKNEVALRGKRVELYCI 277

Query: 242 VFGAPKPEVNWIHNQK------ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGT 295
             G P P+  W+ N K       +T G Y       L I    F D G Y+C   N +G 
Sbjct: 278 YGGTPLPQTVWLKNGKRVEWNDRITQGNY----GKSLVIRQANFDDEGTYSCDVSNGVGQ 333

Query: 296 AQGSGSLTVKEHT--HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID-F 352
           AQ S S+ +K H   + T++PE       +   F C A   P  + +I W+   +PI+  
Sbjct: 334 AQ-SYSINLKIHAIPYFTEEPEIQNAAEDEEVVFNCKAAGHP--EPTIQWIHNGKPIEQS 390

Query: 353 ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           E  PR   +N+Y + +    + D+G Y C A   L ++     L V
Sbjct: 391 EPNPRRTVTNNY-IKIVNLVKNDTGNYGCNATNSLGYVYKDVYLNV 435



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 8/72 (11%)

Query: 671 FQPYEIKVVQTWTEKDGEGSIREL-IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGP 729
           F+ Y+I   QTWT+K+GE  +RE+  ++ G   T    +F P SKN+ARVLA+NG +NGP
Sbjct: 857 FKGYKI---QTWTDKEGEEGMREIHTIDNGALVT----QFKPDSKNYARVLAYNGRFNGP 909

Query: 730 PSEIISFVTPEG 741
           PS +I F TPEG
Sbjct: 910 PSAVIDFDTPEG 921



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 109/281 (38%), Gaps = 37/281 (13%)

Query: 136 NAAEEETVTFECKASGLPEPEI---------HWVHNGKPISQAPPNPR--RKVGPNRITI 184
           N   ++    EC+A G PEP+           W+ NGK       + R  R+ G   + I
Sbjct: 47  NKESDKPFIIECEADGQPEPDCWLAKRGQRYRWIKNGKKFDWQAYDNRMLRQPGRGTLVI 106

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKD-VYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRV- 242
            + +  D G Y C A+N  G    + V+V          EA +    V+G+   L C   
Sbjct: 107 TSPKDEDLGQYQCFASNEFGVATSNSVFVRKAELNAFKDEAARSVEAVEGEPFSLQCEAP 166

Query: 243 FGAPKPEVNWIHNQ------KELTGGRYTILETGDLKITDVAFAD-SGE--YTCFARNKL 293
            G PKP VNW+  Q      K +   R T+   G L  ++V   D SG+  Y C A +  
Sbjct: 167 DGWPKPTVNWLIQQTVDAGIKSINNSRMTLDPEGTLWFSNVTREDASGDFWYACSATSVF 226

Query: 294 GTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI------------ 341
                 G+  + +   +            +    R N V+    ++ +            
Sbjct: 227 RNEYKIGNKILLDVKQMGVSASQNRYPPKRQYVTRKNEVALRGKRVELYCIYGGTPLPQT 286

Query: 342 VWLRGSEPIDFESEPRFVQSN-DYSLTVTKSSELDSGQYTC 381
           VWL+  + +++    R  Q N   SL + +++  D G Y+C
Sbjct: 287 VWLKNGKRVEWND--RITQGNYGKSLVIRQANFDDEGTYSC 325


>gi|195049599|ref|XP_001992750.1| GH24930 [Drosophila grimshawi]
 gi|193893591|gb|EDV92457.1| GH24930 [Drosophila grimshawi]
          Length = 1298

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 277/488 (56%), Positives = 340/488 (69%), Gaps = 7/488 (1%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           R+EYKIGN+ILL+V   G+SASQNRH PK+QYVTRK EVALR K+VEL+CI+GGTPLPQT
Sbjct: 218 RNEYKIGNKILLDVKQMGVSASQNRHPPKRQYVTRKNEVALRGKRVELYCIYGGTPLPQT 277

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +W KDG  +  SD I+QGNYGKSL+I+    +D G+Y C+VSNGVG A+SYSI+L + A 
Sbjct: 278 VWYKDGQRVQWSDHITQGNYGKSLVIRQANLNDAGTYNCDVSNGVGNAQSYSINLKIHAI 337

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFT EPE  NAAE+E V F CKA+G PEP I W+HNGKPI+Q+ PNPRR V  + I I 
Sbjct: 338 PYFTEEPEIQNAAEDEEVVFNCKAAGHPEPTIQWIHNGKPIAQSEPNPRRTVTNSYIKIV 397

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
           NL K DTGNYGCNATNSLGYVYKDVY+NV A  PEI E P+ E++V+G+ + + CRVFGA
Sbjct: 398 NLVKKDTGNYGCNATNSLGYVYKDVYLNVQALPPEIQEPPRAEFSVNGRNITMKCRVFGA 457

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP+V W  N   LTGGRYT+L +GDL+I DVAFAD+G YTC A NK G A   GSL V+
Sbjct: 458 PKPQVKWRQNNNWLTGGRYTVLASGDLEIKDVAFADNGNYTCLAVNKFGNATAQGSLVVR 517

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           E T IT +P++YEV AGQSATFRCN   DP+L L+I WL+  + IDF++E RFV++ND S
Sbjct: 518 ERTRITQEPQNYEVAAGQSATFRCNEAHDPNLNLTIEWLKDGQNIDFDAEARFVKTNDNS 577

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           LT+ K+ ELDSG+YTC A+TELD   A+A L VQ    AP    +    D  KA +SW P
Sbjct: 578 LTIAKTMELDSGEYTCVARTELDEATARANLIVQDVPNAPKLIGITCQDD--KAEISWEP 635

Query: 426 VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTT-TEVDKFVPASKNFARVLAFN 484
                 R     Y +Q  T        R    +K  ST  + V +  P +    RV+AFN
Sbjct: 636 QGDN--RSPILHYTIQYNTSFTPASWDRAF--DKVPSTDFSFVVQMSPWANYTYRVIAFN 691

Query: 485 GAYNGPPS 492
                PPS
Sbjct: 692 KIGQSPPS 699



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 195/609 (32%), Positives = 284/609 (46%), Gaps = 99/609 (16%)

Query: 41   KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEF 96
            + E ++  + + + C   G P PQ  W ++      ++ ++ G Y       L IK V F
Sbjct: 438  RAEFSVNGRNITMKCRVFGAPKPQVKWRQN------NNWLTGGRYTVLASGDLEIKDVAF 491

Query: 97   SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE 156
            +D G+YTC   N  G A +    L V      T EP+    A  ++ TF C  +  P   
Sbjct: 492  ADNGNYTCLAVNKFGNATAQG-SLVVRERTRITQEPQNYEVAAGQSATFRCNEAHDPNLN 550

Query: 157  --IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSL--GYVYKDVYV 212
              I W+ +G+ I         K   N +TI    + D+G Y C A   L       ++ V
Sbjct: 551  LTIEWLKDGQNIDFDAEARFVKTNDNSLTIAKTMELDSGEYTCVARTELDEATARANLIV 610

Query: 213  NVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWI---HNQKELTGGRYTILET 269
              + +AP              K + +TC+     K E++W     N+  +    YTI   
Sbjct: 611  QDVPNAP--------------KLIGITCQ---DDKAEISWEPQGDNRSPIL--HYTIQYN 651

Query: 270  ------------GDLKITDVAFA------DSGEYTCFARNKLGTAQGSG---------SL 302
                          +  TD +F        +  Y   A NK+G +  SG         ++
Sbjct: 652  TSFTPASWDRAFDKVPSTDFSFVVQMSPWANYTYRVIAFNKIGQSPPSGHSDACTTQPNV 711

Query: 303  TVKEHTHITDQ---PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFES----- 354
              K   ++  Q   P +  +E         NA   P+ +  + W R      +E+     
Sbjct: 712  PFKNPENVVGQGTEPNNLVIEWTPMPEIEHNA---PNFQYRVSWKRDIPAAAWENKDIYD 768

Query: 355  ----------EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEA 404
                      +P FV+   Y + V   +E        R ++ +   E         PLEA
Sbjct: 769  WRQSNLLIADQPTFVK---YHIKVVAINE--------RGESNVAAEEVIGYSGEDRPLEA 817

Query: 405  PSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTT 464
            P+NF++  V  A  A + WNPVS +S+RGHF+GYK+QTWT+K+GE  +RE+     ++  
Sbjct: 818  PTNFSMQHVTSATNAYLGWNPVSEESVRGHFKGYKIQTWTDKEGEEGLREIHTIHSKALV 877

Query: 465  TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW 524
            T+   F P SKN+ARVL +NG +NGPPS +I F TPEGVP  VQSLEA PLGSSAF+L W
Sbjct: 878  TQ---FKPDSKNYARVLVYNGRFNGPPSAVIDFDTPEGVPSAVQSLEAYPLGSSAFWLTW 934

Query: 525  VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAG 584
             KP  PNG L GYKI Y+ V+G+ V    E  P+I+DP  T  K+AGL+P+TKYRI +  
Sbjct: 935  KKPLNPNGKLTGYKIYYEVVRGSFVDERREYDPHITDPRITRMKMAGLKPNTKYRISITA 994

Query: 585  YTKAGDGAE 593
             TK G+GAE
Sbjct: 995  TTKMGEGAE 1003



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 161/615 (26%), Positives = 253/615 (41%), Gaps = 71/615 (11%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202
           V   C   G P P+  W  +G+ +  +    +   G + + I     +D G Y C+ +N 
Sbjct: 263 VELYCIYGGTPLPQTVWYKDGQRVQWSDHITQGNYGKS-LVIRQANLNDAGTYNCDVSNG 321

Query: 203 LGYVYKDVYVNVLAHA-PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG 261
           +G   +   +N+  HA P  TE P+ +   + + VV  C+  G P+P + WIHN K +  
Sbjct: 322 VGNA-QSYSINLKIHAIPYFTEEPEIQNAAEDEEVVFNCKAAGHPEPTIQWIHNGKPIAQ 380

Query: 262 G----RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDY 317
                R T+  +  +KI ++   D+G Y C A N LG       L V+       +P   
Sbjct: 381 SEPNPRRTVTNSY-IKIVNLVKKDTGNYGCNATNSLGYVYKDVYLNVQALPPEIQEPPRA 439

Query: 318 EVEA-GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
           E    G++ T +C     P  K  + W + +   ++ +  R+       L +   +  D+
Sbjct: 440 EFSVNGRNITMKCRVFGAP--KPQVKWRQNN---NWLTGGRYTVLASGDLEIKDVAFADN 494

Query: 377 GQYTCRAQTELDFIEAQATLTVQVPL---EAPSNFTLIQVIDAKKAVVSWNPVSPQSLR- 432
           G YTC A  +     AQ +L V+      + P N+   +V   + A    N     +L  
Sbjct: 495 GNYTCLAVNKFGNATAQGSLVVRERTRITQEPQNY---EVAAGQSATFRCNEAHDPNLNL 551

Query: 433 -------GHFRGYKVQTWTEKDGEGSI---RELIVNKGESTT---TEVDKFVPASKNFAR 479
                  G    +  +    K  + S+   + + ++ GE T    TE+D+    +     
Sbjct: 552 TIEWLKDGQNIDFDAEARFVKTNDNSLTIAKTMELDSGEYTCVARTELDEATARAN---- 607

Query: 480 VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKI 539
            L      N P                   L  I        + W         ++ Y I
Sbjct: 608 -LIVQDVPNAP------------------KLIGITCQDDKAEISWEPQGDNRSPILHYTI 648

Query: 540 KYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY 599
           +Y     T   P      +   P+T  + +  + P   Y   +  + K G    S +   
Sbjct: 649 QYN----TSFTPASWDRAFDKVPSTDFSFVVQMSPWANYTYRVIAFNKIGQSPPSGHSDA 704

Query: 600 ------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQD 653
                 VPFKNP+NV G+G+ PNNLVI WT MPEIEHNAP+F+YR+ W+R     AW   
Sbjct: 705 CTTQPNVPFKNPENVVGQGTEPNNLVIEWTPMPEIEHNAPNFQYRVSWKRDIPAAAWENK 764

Query: 654 DVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 713
           D+ DWRQS L++A+QPTF  Y IKVV      +   +  E+I   GE    E     P +
Sbjct: 765 DIYDWRQSNLLIADQPTFVKYHIKVVAINERGESNVAAEEVIGYSGEDRPLE----APTN 820

Query: 714 KNFARVLAFNGAYNG 728
            +   V +   AY G
Sbjct: 821 FSMQHVTSATNAYLG 835



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 171/400 (42%), Gaps = 55/400 (13%)

Query: 43  EVALRNKKVE----LFCIFGGTPLPQTIWSKDGVPIN---PSDRISQGNYGKSLIIKHVE 95
           +VA +NK+ +    + C   G P P+  W K+G P +     +R+S+     SL+I   +
Sbjct: 42  KVAQQNKESDKPFIIECEADGQPEPEYRWIKNGKPFDWQAYDNRMSRQPGRGSLVITSPK 101

Query: 96  FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECKA-SGLP 153
             D G Y C  SN  G A S S+ +       F  E    + A E +  + +C+A  G P
Sbjct: 102 DEDLGQYQCFASNEFGVATSNSVFVRKAELNAFKDEVARSVEANEGDPFSLQCEAPDGWP 161

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--------NLRKSDTGN---YGCNATNS 202
           +P ++W+     I Q+  +  + +  +R+T++        N+ + D  +   Y C+AT+ 
Sbjct: 162 KPTVNWL-----IQQSIGSGIKSINNSRMTLDPEGTLWFSNVTREDASDDFYYACSATSV 216

Query: 203 LGYVYK---DVYVNVL---AHAPEITEAPKDEY-------TVDGKTVVLTCRVFGAPKPE 249
               YK    + ++V      A +    PK +Y        + GK V L C   G P P+
Sbjct: 217 FRNEYKIGNKILLDVKQMGVSASQNRHPPKRQYVTRKNEVALRGKRVELYCIYGGTPLPQ 276

Query: 250 VNWIHNQK------ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLT 303
             W  + +       +T G Y       L I      D+G Y C   N +G AQ S S+ 
Sbjct: 277 TVWYKDGQRVQWSDHITQGNY----GKSLVIRQANLNDAGTYNCDVSNGVGNAQ-SYSIN 331

Query: 304 VKEHT--HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPI-DFESEPRFVQ 360
           +K H   + T++PE       +   F C A   P  + +I W+   +PI   E  PR   
Sbjct: 332 LKIHAIPYFTEEPEIQNAAEDEEVVFNCKAAGHP--EPTIQWIHNGKPIAQSEPNPRRTV 389

Query: 361 SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           +N Y + +    + D+G Y C A   L ++     L VQ 
Sbjct: 390 TNSY-IKIVNLVKKDTGNYGCNATNSLGYVYKDVYLNVQA 428



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 6/71 (8%)

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
           F+ Y+I   QTWT+K+GE  +RE+     ++  T+   F P SKN+ARVL +NG +NGPP
Sbjct: 848 FKGYKI---QTWTDKEGEEGLREIHTIHSKALVTQ---FKPDSKNYARVLVYNGRFNGPP 901

Query: 731 SEIISFVTPEG 741
           S +I F TPEG
Sbjct: 902 SAVIDFDTPEG 912


>gi|270016380|gb|EFA12826.1| neuroglian [Tribolium castaneum]
          Length = 1267

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 263/419 (62%), Positives = 312/419 (74%), Gaps = 4/419 (0%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           + EYK GN +LLNV++TG+SA+ N+  P  QYV+RK  VA   K+ +L+CIFGGTPLPQT
Sbjct: 216 KHEYKYGNSVLLNVVSTGVSAASNKREPVLQYVSRKNTVAYLGKQQKLYCIFGGTPLPQT 275

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +W KDG PI  SDRI+Q NYGKSL+I+ V F D+G YTCEVSNGVGEAKSYSIDL V A 
Sbjct: 276 VWYKDGKPIQSSDRITQDNYGKSLVIRVVNFEDEGKYTCEVSNGVGEAKSYSIDLKVFAI 335

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYF  EPE  NAAE ETV F C+A G+P+PEI W+HNGKPIS+APPNPRR+V  NRI IE
Sbjct: 336 PYFIAEPERQNAAEGETVEFRCEAGGVPKPEIKWIHNGKPISEAPPNPRRRVENNRIVIE 395

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
            L +SDTGNYGCNATNSLGYVYKDVYVNVL+ APEI EAP D   VDG+ V + C+V GA
Sbjct: 396 RLVESDTGNYGCNATNSLGYVYKDVYVNVLSLAPEILEAPTDTQAVDGQNVTMICKVLGA 455

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP + W  N++ELTGGRY +   GDL I +V F D G YTCFA NK G A    +L VK
Sbjct: 456 PKPSIKWSLNERELTGGRYIVQPNGDLIIRNVQFDDRGNYTCFAENKFGNASAKAALLVK 515

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
            HT+ITD PEDYEV A  SATFRCNAVSD SL L I+WL+  +PID E EPRFV+S+DYS
Sbjct: 516 SHTYITDGPEDYEVAAHTSATFRCNAVSDDSLDLEIIWLKNDQPIDLEEEPRFVRSSDYS 575

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQV-IDAKKAVVSW 423
           LT+T++ ELDSG YTC A+T LD   A+A L VQ   + P+  ++  V   AK A + W
Sbjct: 576 LTITQTIELDSGTYTCVARTALDEASAKAQLIVQ---DVPNPPSMEGVECHAKDATIRW 631



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 161/585 (27%), Positives = 242/585 (41%), Gaps = 59/585 (10%)

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS---------DTGNYGC 197
           C   G P P+  W  +GKPI  +          +RIT +N  KS         D G Y C
Sbjct: 265 CIFGGTPLPQTVWYKDGKPIQSS----------DRITQDNYGKSLVIRVVNFEDEGKYTC 314

Query: 198 NATNSLGYVYKDVYVNVLAHA-PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
             +N +G   K   +++   A P     P+ +   +G+TV   C   G PKPE+ WIHN 
Sbjct: 315 EVSNGVGEA-KSYSIDLKVFAIPYFIAEPERQNAAEGETVEFRCEAGGVPKPEIKWIHNG 373

Query: 257 KELTGGR---YTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITD 312
           K ++         +E   + I  +  +D+G Y C A N LG       + V      I +
Sbjct: 374 KPISEAPPNPRRRVENNRIVIERLVESDTGNYGCNATNSLGYVYKDVYVNVLSLAPEILE 433

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
            P D +   GQ+ T  C  +  P  K SI W      +   +  R++   +  L +    
Sbjct: 434 APTDTQAVDGQNVTMICKVLGAP--KPSIKWSLNEREL---TGGRYIVQPNGDLIIRNVQ 488

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPL---EAPSNFTLIQVIDAKKAVVSWNPVSPQ 429
             D G YTC A+ +     A+A L V+      + P ++   +V     A    N VS  
Sbjct: 489 FDDRGNYTCFAENKFGNASAKAALLVKSHTYITDGPEDY---EVAAHTSATFRCNAVSDD 545

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRE--LIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
           SL           W + D    + E    V   + + T        S  +  V       
Sbjct: 546 SLDLEI------IWLKNDQPIDLEEEPRFVRSSDYSLTITQTIELDSGTYTCVARTALDE 599

Query: 488 NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
               +++I     + VP    S+E +   +    ++W         +  Y I+Y     T
Sbjct: 600 ASAKAQLIV----QDVPNP-PSMEGVECHAKDATIRWKSMGDNRAPISHYIIEYN----T 650

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY------VP 601
              P      Y + P T  +    + P T Y   +    K G    S +         VP
Sbjct: 651 TFTPETWTAAYNNVPATDMSYNVPMSPWTNYTFRVIAVNKIGKSLPSTHSDVCTTEPDVP 710

Query: 602 FKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQS 661
           +KNPD+V+G G  P+NL+ISWT MP+IEHNA  F+YR++WRR   GE +   D+ DWR  
Sbjct: 711 YKNPDDVKGEGDRPDNLIISWTPMPKIEHNADKFQYRVYWRRDIPGERYESRDITDWRVK 770

Query: 662 ELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEV 706
           + V+ NQPTFQ Y IKVV    + +   + +E+I   GE+   E 
Sbjct: 771 QFVVDNQPTFQQYRIKVVAMNEKGEANVAPKEVIGYSGENIPIEA 815



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 103/259 (39%), Positives = 140/259 (54%), Gaps = 21/259 (8%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+EAP+NFTL+Q+   K A++SWNPV  +S++GH +GYK++TW+  D    +   I  +
Sbjct: 811  IPIEAPTNFTLLQIQGPKTALLSWNPVDKKSVQGHLKGYKIKTWS--DISSPMHNEIQVQ 868

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLG--- 516
            G      VD   P + N+A+V  +NG YNGPPSE +SF TPEGVP  +  LEA PLG   
Sbjct: 869  GSVAKALVDNLDPYTMNYAQVFVYNGKYNGPPSETLSFKTPEGVPEAMSYLEAYPLGAFR 928

Query: 517  --------SSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
                    SSAF L W KPE+PNG+L GY I Y+ +  +     + R P I      SAK
Sbjct: 929  PNDATKTASSAFLLTWKKPEKPNGMLTGYDIYYRRLDDSTTNSKIARNPQIRGGDVLSAK 988

Query: 569  LAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEI 628
            L+GLEP T Y I++A  T AG   E    FY+  +   +  G  + P      W  +   
Sbjct: 989  LSGLEPDTNYVIYIAARTSAGPSKE----FYIERRT--SPSGASTPPGVPDFDWETVKAD 1042

Query: 629  EHNAPHFKYRIFWRRHNTG 647
            +        RI WR   TG
Sbjct: 1043 DDG--KVTVRIQWRPDKTG 1059



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 130/472 (27%), Positives = 200/472 (42%), Gaps = 67/472 (14%)

Query: 11  IGNRILLNVIATG--ISASQNRHAPKQQYVTRK---KEVALR-------NKKVELFCIFG 58
           + +R +L+++ T   +S +  + A    Y+ ++    EV  +       +K   + C   
Sbjct: 1   MADRFILSLLVTAFSLSCTLGKEASSPPYIVKQPPTDEVLFQVESGGETDKPFYIECEAI 60

Query: 59  GTPLPQTIWSKDGVPIN---PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKS 115
           G P P+  W K+G P +     DRISQ     +L I      D G Y C   N  G A S
Sbjct: 61  GEPAPKYRWVKNGKPFHWQTYDDRISQQQGRGTLSISKPTDVDLGQYQCFAENEHGVATS 120

Query: 116 YSIDLSVLAAPYF-TVEPEFINAAEEETVTFECK-ASGLPEPEIHWVH---NG--KPISQ 168
            S+ +       F T +P  ++  E E     C+   G P+P +HW++   NG  K I+ 
Sbjct: 121 NSVFMRKAELNSFKTTQPISLSGDEGEPFKLTCEPPDGWPKPIVHWIYLYTNGGFKTINS 180

Query: 169 APPNPRRKVGP-NRITIENLRKSDTGN---YGCNATNSLGYVYK---DVYVNVLA---HA 218
           +    R  + P   +   NL + D  +   Y C AT+   + YK    V +NV++    A
Sbjct: 181 S----RMTIDPEGNLWFSNLTRDDVTDNFKYACAATSPFKHEYKYGNSVLLNVVSTGVSA 236

Query: 219 PEITEAPKDEYTVDGKTVV-------LTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETG 270
                 P  +Y     TV        L C   G P P+  W  + K + +  R T    G
Sbjct: 237 ASNKREPVLQYVSRKNTVAYLGKQQKLYCIFGGTPLPQTVWYKDGKPIQSSDRITQDNYG 296

Query: 271 -DLKITDVAFADSGEYTCFARNKLGTAQG-SGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
             L I  V F D G+YTC   N +G A+  S  L V    +   +PE      G++  FR
Sbjct: 297 KSLVIRVVNFEDEGKYTCEVSNGVGEAKSYSIDLKVFAIPYFIAEPERQNAAEGETVEFR 356

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEP---RFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
           C A   P  K  I W+   +PI  E+ P   R V++N   + + +  E D+G Y C A  
Sbjct: 357 CEAGGVP--KPEIKWIHNGKPIS-EAPPNPRRRVENN--RIVIERLVESDTGNYGCNATN 411

Query: 386 ELDFIEAQATLTV--QVP--LEAPS--------NFTLI-QVIDAKKAVVSWN 424
            L ++     + V    P  LEAP+        N T+I +V+ A K  + W+
Sbjct: 412 SLGYVYKDVYVNVLSLAPEILEAPTDTQAVDGQNVTMICKVLGAPKPSIKWS 463



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 2/63 (3%)

Query: 679 VQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           ++TW+  D    +   I  +G      VD   P + N+A+V  +NG YNGPPSE +SF T
Sbjct: 851 IKTWS--DISSPMHNEIQVQGSVAKALVDNLDPYTMNYAQVFVYNGKYNGPPSETLSFKT 908

Query: 739 PEG 741
           PEG
Sbjct: 909 PEG 911


>gi|189242457|ref|XP_970217.2| PREDICTED: similar to AGAP000720-PA [Tribolium castaneum]
          Length = 1259

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 263/419 (62%), Positives = 312/419 (74%), Gaps = 4/419 (0%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           + EYK GN +LLNV++TG+SA+ N+  P  QYV+RK  VA   K+ +L+CIFGGTPLPQT
Sbjct: 216 KHEYKYGNSVLLNVVSTGVSAASNKREPVLQYVSRKNTVAYLGKQQKLYCIFGGTPLPQT 275

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +W KDG PI  SDRI+Q NYGKSL+I+ V F D+G YTCEVSNGVGEAKSYSIDL V A 
Sbjct: 276 VWYKDGKPIQSSDRITQDNYGKSLVIRVVNFEDEGKYTCEVSNGVGEAKSYSIDLKVFAI 335

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYF  EPE  NAAE ETV F C+A G+P+PEI W+HNGKPIS+APPNPRR+V  NRI IE
Sbjct: 336 PYFIAEPERQNAAEGETVEFRCEAGGVPKPEIKWIHNGKPISEAPPNPRRRVENNRIVIE 395

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
            L +SDTGNYGCNATNSLGYVYKDVYVNVL+ APEI EAP D   VDG+ V + C+V GA
Sbjct: 396 RLVESDTGNYGCNATNSLGYVYKDVYVNVLSLAPEILEAPTDTQAVDGQNVTMICKVLGA 455

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP + W  N++ELTGGRY +   GDL I +V F D G YTCFA NK G A    +L VK
Sbjct: 456 PKPSIKWSLNERELTGGRYIVQPNGDLIIRNVQFDDRGNYTCFAENKFGNASAKAALLVK 515

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
            HT+ITD PEDYEV A  SATFRCNAVSD SL L I+WL+  +PID E EPRFV+S+DYS
Sbjct: 516 SHTYITDGPEDYEVAAHTSATFRCNAVSDDSLDLEIIWLKNDQPIDLEEEPRFVRSSDYS 575

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQV-IDAKKAVVSW 423
           LT+T++ ELDSG YTC A+T LD   A+A L VQ   + P+  ++  V   AK A + W
Sbjct: 576 LTITQTIELDSGTYTCVARTALDEASAKAQLIVQ---DVPNPPSMEGVECHAKDATIRW 631



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 161/585 (27%), Positives = 242/585 (41%), Gaps = 59/585 (10%)

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS---------DTGNYGC 197
           C   G P P+  W  +GKPI  +          +RIT +N  KS         D G Y C
Sbjct: 265 CIFGGTPLPQTVWYKDGKPIQSS----------DRITQDNYGKSLVIRVVNFEDEGKYTC 314

Query: 198 NATNSLGYVYKDVYVNVLAHA-PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
             +N +G   K   +++   A P     P+ +   +G+TV   C   G PKPE+ WIHN 
Sbjct: 315 EVSNGVGEA-KSYSIDLKVFAIPYFIAEPERQNAAEGETVEFRCEAGGVPKPEIKWIHNG 373

Query: 257 KELTGGR---YTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITD 312
           K ++         +E   + I  +  +D+G Y C A N LG       + V      I +
Sbjct: 374 KPISEAPPNPRRRVENNRIVIERLVESDTGNYGCNATNSLGYVYKDVYVNVLSLAPEILE 433

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
            P D +   GQ+ T  C  +  P  K SI W      +   +  R++   +  L +    
Sbjct: 434 APTDTQAVDGQNVTMICKVLGAP--KPSIKWSLNEREL---TGGRYIVQPNGDLIIRNVQ 488

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPL---EAPSNFTLIQVIDAKKAVVSWNPVSPQ 429
             D G YTC A+ +     A+A L V+      + P ++   +V     A    N VS  
Sbjct: 489 FDDRGNYTCFAENKFGNASAKAALLVKSHTYITDGPEDY---EVAAHTSATFRCNAVSDD 545

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRE--LIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
           SL           W + D    + E    V   + + T        S  +  V       
Sbjct: 546 SLDLEI------IWLKNDQPIDLEEEPRFVRSSDYSLTITQTIELDSGTYTCVARTALDE 599

Query: 488 NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
               +++I     + VP    S+E +   +    ++W         +  Y I+Y     T
Sbjct: 600 ASAKAQLIV----QDVPNP-PSMEGVECHAKDATIRWKSMGDNRAPISHYIIEYN----T 650

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY------VP 601
              P      Y + P T  +    + P T Y   +    K G    S +         VP
Sbjct: 651 TFTPETWTAAYNNVPATDMSYNVPMSPWTNYTFRVIAVNKIGKSLPSTHSDVCTTEPDVP 710

Query: 602 FKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQS 661
           +KNPD+V+G G  P+NL+ISWT MP+IEHNA  F+YR++WRR   GE +   D+ DWR  
Sbjct: 711 YKNPDDVKGEGDRPDNLIISWTPMPKIEHNADKFQYRVYWRRDIPGERYESRDITDWRVK 770

Query: 662 ELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEV 706
           + V+ NQPTFQ Y IKVV    + +   + +E+I   GE+   E 
Sbjct: 771 QFVVDNQPTFQQYRIKVVAMNEKGEANVAPKEVIGYSGENIPIEA 815



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 103/259 (39%), Positives = 140/259 (54%), Gaps = 21/259 (8%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+EAP+NFTL+Q+   K A++SWNPV  +S++GH +GYK++TW+  D    +   I  +
Sbjct: 811  IPIEAPTNFTLLQIQGPKTALLSWNPVDKKSVQGHLKGYKIKTWS--DISSPMHNEIQVQ 868

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLG--- 516
            G      VD   P + N+A+V  +NG YNGPPSE +SF TPEGVP  +  LEA PLG   
Sbjct: 869  GSVAKALVDNLDPYTMNYAQVFVYNGKYNGPPSETLSFKTPEGVPEAMSYLEAYPLGAFR 928

Query: 517  --------SSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
                    SSAF L W KPE+PNG+L GY I Y+ +  +     + R P I      SAK
Sbjct: 929  PNDATKTASSAFLLTWKKPEKPNGMLTGYDIYYRRLDDSTTNSKIARNPQIRGGDVLSAK 988

Query: 569  LAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEI 628
            L+GLEP T Y I++A  T AG   E    FY+  +   +  G  + P      W  +   
Sbjct: 989  LSGLEPDTNYVIYIAARTSAGPSKE----FYIERRT--SPSGASTPPGVPDFDWETVKAD 1042

Query: 629  EHNAPHFKYRIFWRRHNTG 647
            +        RI WR   TG
Sbjct: 1043 DDG--KVTVRIQWRPDKTG 1059



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 130/472 (27%), Positives = 200/472 (42%), Gaps = 67/472 (14%)

Query: 11  IGNRILLNVIATG--ISASQNRHAPKQQYVTRK---KEVALR-------NKKVELFCIFG 58
           + +R +L+++ T   +S +  + A    Y+ ++    EV  +       +K   + C   
Sbjct: 1   MADRFILSLLVTAFSLSCTLGKEASSPPYIVKQPPTDEVLFQVESGGETDKPFYIECEAI 60

Query: 59  GTPLPQTIWSKDGVPIN---PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKS 115
           G P P+  W K+G P +     DRISQ     +L I      D G Y C   N  G A S
Sbjct: 61  GEPAPKYRWVKNGKPFHWQTYDDRISQQQGRGTLSISKPTDVDLGQYQCFAENEHGVATS 120

Query: 116 YSIDLSVLAAPYF-TVEPEFINAAEEETVTFECK-ASGLPEPEIHWVH---NG--KPISQ 168
            S+ +       F T +P  ++  E E     C+   G P+P +HW++   NG  K I+ 
Sbjct: 121 NSVFMRKAELNSFKTTQPISLSGDEGEPFKLTCEPPDGWPKPIVHWIYLYTNGGFKTINS 180

Query: 169 APPNPRRKVGP-NRITIENLRKSDTGN---YGCNATNSLGYVYK---DVYVNVLA---HA 218
           +    R  + P   +   NL + D  +   Y C AT+   + YK    V +NV++    A
Sbjct: 181 S----RMTIDPEGNLWFSNLTRDDVTDNFKYACAATSPFKHEYKYGNSVLLNVVSTGVSA 236

Query: 219 PEITEAPKDEYTVDGKTVV-------LTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETG 270
                 P  +Y     TV        L C   G P P+  W  + K + +  R T    G
Sbjct: 237 ASNKREPVLQYVSRKNTVAYLGKQQKLYCIFGGTPLPQTVWYKDGKPIQSSDRITQDNYG 296

Query: 271 -DLKITDVAFADSGEYTCFARNKLGTAQG-SGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
             L I  V F D G+YTC   N +G A+  S  L V    +   +PE      G++  FR
Sbjct: 297 KSLVIRVVNFEDEGKYTCEVSNGVGEAKSYSIDLKVFAIPYFIAEPERQNAAEGETVEFR 356

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEP---RFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
           C A   P  K  I W+   +PI  E+ P   R V++N   + + +  E D+G Y C A  
Sbjct: 357 CEAGGVP--KPEIKWIHNGKPIS-EAPPNPRRRVENN--RIVIERLVESDTGNYGCNATN 411

Query: 386 ELDFIEAQATLTV--QVP--LEAPS--------NFTLI-QVIDAKKAVVSWN 424
            L ++     + V    P  LEAP+        N T+I +V+ A K  + W+
Sbjct: 412 SLGYVYKDVYVNVLSLAPEILEAPTDTQAVDGQNVTMICKVLGAPKPSIKWS 463



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 2/63 (3%)

Query: 679 VQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           ++TW+  D    +   I  +G      VD   P + N+A+V  +NG YNGPPSE +SF T
Sbjct: 851 IKTWS--DISSPMHNEIQVQGSVAKALVDNLDPYTMNYAQVFVYNGKYNGPPSETLSFKT 908

Query: 739 PEG 741
           PEG
Sbjct: 909 PEG 911


>gi|194769812|ref|XP_001966995.1| GF21814 [Drosophila ananassae]
 gi|190622790|gb|EDV38314.1| GF21814 [Drosophila ananassae]
          Length = 1407

 Score =  538 bits (1387), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 255/420 (60%), Positives = 314/420 (74%), Gaps = 2/420 (0%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           RSEYKIGN++LL+V   G+SASQNRH P +QYV+R++ +ALR K++ELFCI+GGTPLPQT
Sbjct: 219 RSEYKIGNKVLLDVKQMGVSASQNRHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQT 278

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +WSKDG  I  SDRI+QG+YGKSL+I+   F D G+YTC+VSNGVG A+S+SI L V + 
Sbjct: 279 VWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIILEVNSV 338

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFT EPE   AAE+E VTFEC+A+G+PEP+I W+HNGKPI Q+ PNPRR V  N ITI 
Sbjct: 339 PYFTKEPEIKVAAEDEEVTFECRAAGVPEPKISWIHNGKPIEQSTPNPRRTVTDNTITII 398

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
           NL K DTGNYGCNATNSLGYVY+DVY+NV A  PEI E P D+ +VDG+ V +TCRV GA
Sbjct: 399 NLVKGDTGNYGCNATNSLGYVYRDVYLNVQALPPEIREKPTDKSSVDGRNVTMTCRVEGA 458

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP V W+     LTGGRY +   GDL+I DV F+D+G+YTC+A NK G     GSL VK
Sbjct: 459 PKPLVKWLRGSNWLTGGRYNVQANGDLEIQDVTFSDAGKYTCYAENKFGNKSADGSLVVK 518

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           EHT IT +P++YEV AGQSATFRCN   D +L + I W +  +PIDFE++PRFVQ+ND S
Sbjct: 519 EHTRITQEPQNYEVAAGQSATFRCNEAHDDTLDIQIDWRKDGQPIDFETQPRFVQTNDNS 578

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           LT+ K+ ELDSG+YTC A+T LD   A+A L VQ    AP    +     A KA +SW P
Sbjct: 579 LTIAKTMELDSGEYTCVARTRLDEATAKANLIVQDVPNAPKLLGI--TCQADKAEISWEP 636



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 120/249 (48%), Positives = 162/249 (65%), Gaps = 9/249 (3%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            PL+AP+NFT+ Q+  +    ++W PVS +S+RGHF+GYK+QTWTEK+GE  +RE+ V KG
Sbjct: 815  PLDAPTNFTMRQITSSTSGYMAWTPVSEESVRGHFKGYKIQTWTEKEGEEGLREIHV-KG 873

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
            ++    V +F P SKNFAR+LA+NG +NGPPS +I F TPEGVP  VQ L+A PLGSSAF
Sbjct: 874  DTHNALVTQFKPDSKNFARILAYNGRFNGPPSAVIDFDTPEGVPSPVQGLDAYPLGSSAF 933

Query: 521  YLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRI 580
            +L W KP  PNG L GYKI Y+ V+G+ VG   E  P+I+DP  T  K+AGL+P++KYRI
Sbjct: 934  WLTWKKPLYPNGKLTGYKIYYEEVQGSYVGERREYDPHITDPRVTRMKMAGLKPNSKYRI 993

Query: 581  HLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
             +   TK G+G+E     Y+  +   +V    + P     SW  +P     A   K+RI 
Sbjct: 994  SITATTKMGEGSE----HYIEKRTLQDVAAM-TAPATPSFSWEQLPSDNGLA---KFRIN 1045

Query: 641  WRRHNTGEA 649
            W+    G A
Sbjct: 1046 WQPSTEGHA 1054



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 160/593 (26%), Positives = 248/593 (41%), Gaps = 61/593 (10%)

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV 206
           C   G P P+  W  +G+ I  +    +   G   + I      D G Y C+ +N +G  
Sbjct: 268 CIYGGTPLPQTVWSKDGQRIQWSDRITQGHYG-KSLVIRQTNFDDAGTYTCDVSNGVGNA 326

Query: 207 YKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG---- 262
                +  +   P  T+ P+ +   + + V   CR  G P+P+++WIHN K +       
Sbjct: 327 QSFSIILEVNSVPYFTKEPEIKVAAEDEEVTFECRAAGVPEPKISWIHNGKPIEQSTPNP 386

Query: 263 RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPEDYEVEA 321
           R T+ +   + I ++   D+G Y C A N LG       L V+     I ++P D     
Sbjct: 387 RRTVTDN-TITIINLVKGDTGNYGCNATNSLGYVYRDVYLNVQALPPEIREKPTDKSSVD 445

Query: 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF-VQSNDYSLTVTKSSELDSGQYT 380
           G++ T  C     P  K  + WLRGS   ++ +  R+ VQ+N   L +   +  D+G+YT
Sbjct: 446 GRNVTMTCRVEGAP--KPLVKWLRGS---NWLTGGRYNVQANG-DLEIQDVTFSDAGKYT 499

Query: 381 CRAQTELDFIEAQATLTVQVPL---EAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRG 437
           C A+ +     A  +L V+      + P N+   +V   + A    N     +L      
Sbjct: 500 CYAENKFGNKSADGSLVVKEHTRITQEPQNY---EVAAGQSATFRCNEAHDDTL------ 550

Query: 438 YKVQTWTEKDG-----EGSIRELIVNKGEST---TTEVDKFVPASKNFARVLAFNGAYNG 489
             +Q    KDG     E   R +  N    T   T E+D          R+       N 
Sbjct: 551 -DIQIDWRKDGQPIDFETQPRFVQTNDNSLTIAKTMELDSGEYTCVARTRLDEATAKAN- 608

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
                   +  + VP   + L  I   +    + W         ++ Y I++     T  
Sbjct: 609 --------LIVQDVPNAPKLL-GITCQADKAEISWEPQGDNRSPILHYTIQFN----TSF 655

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY------VPFK 603
            P      Y   P T  + +  + P   Y   +  + K G    S +         VP+K
Sbjct: 656 TPASWDAAYEKVPNTDFSFVVQMSPWANYTFRVIAFNKIGPSPPSAHSESCTTQPDVPYK 715

Query: 604 NPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSEL 663
           NPDNV G+G  PNNLVISWT MPEIEHNAP F+YR+ W+R      W   ++ DWRQ+ +
Sbjct: 716 NPDNVVGQGREPNNLVISWTPMPEIEHNAPGFQYRVNWKRDIPAAPWENQNIYDWRQNNI 775

Query: 664 VLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 716
           V+ +QPTF  Y IKVV    + +   +  E++   GE      D+ + A  NF
Sbjct: 776 VITDQPTFVKYLIKVVAINEKGESNVAAEEVVGYSGE------DRPLDAPTNF 822



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 160/405 (39%), Gaps = 48/405 (11%)

Query: 55  CIFGGTPLPQTIWSKDGVPIN---PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVG 111
           C   G P P+  W K+G   N     +R+ Q     SL+I      D+G Y C  SN  G
Sbjct: 59  CEADGQPEPEYSWIKNGKKFNWQAYDNRMLQQPGRGSLVITSPRDEDRGHYQCFASNEFG 118

Query: 112 EAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECKA-SGLPEPEIHWVHNGKPISQA 169
            A S S+ +       F  E  + + A E E    +C A  G P P ++W+     I + 
Sbjct: 119 TATSNSVYVRKAELNAFKDENSKTLEAVEGEPYMLKCAAPDGFPSPTVNWM-----IQEV 173

Query: 170 PPNPRRKVGPNRITIE--------NLRKSDTGN---YGCNATNSLGYVYK---DVYVNVL 215
                + +  +R+T++        N+ + D      Y C+AT+     YK    V ++V 
Sbjct: 174 SDASIKSINNSRMTLDPEGNLWFSNVTREDASADFYYACSATSVFRSEYKIGNKVLLDVK 233

Query: 216 ---AHAPEITEAPKDEY-------TVDGKTVVLTCRVFGAPKPEVNW------IHNQKEL 259
                A +    P  +Y        + GK + L C   G P P+  W      I     +
Sbjct: 234 QMGVSASQNRHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQTVWSKDGQRIQWSDRI 293

Query: 260 TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG-SGSLTVKEHTHITDQPEDYE 318
           T G Y       L I    F D+G YTC   N +G AQ  S  L V    + T +PE   
Sbjct: 294 TQGHY----GKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIILEVNSVPYFTKEPEIKV 349

Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQ 378
               +  TF C A   P  K+S  W+   +PI+  +        D ++T+    + D+G 
Sbjct: 350 AAEDEEVTFECRAAGVPEPKIS--WIHNGKPIEQSTPNPRRTVTDNTITIINLVKGDTGN 407

Query: 379 YTCRAQTELDFIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVS 422
           Y C A   L ++     L VQ +P E     T    +D +   ++
Sbjct: 408 YGCNATNSLGYVYRDVYLNVQALPPEIREKPTDKSSVDGRNVTMT 452



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 52/71 (73%), Gaps = 4/71 (5%)

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
           F+ Y+I   QTWTEK+GE  +RE+ V KG++    V +F P SKNFAR+LA+NG +NGPP
Sbjct: 849 FKGYKI---QTWTEKEGEEGLREIHV-KGDTHNALVTQFKPDSKNFARILAYNGRFNGPP 904

Query: 731 SEIISFVTPEG 741
           S +I F TPEG
Sbjct: 905 SAVIDFDTPEG 915



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 109/274 (39%), Gaps = 32/274 (11%)

Query: 136 NAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR--ITIENLRKSDTG 193
           N   +     EC+A G PEPE  W+ NGK  +    + R    P R  + I + R  D G
Sbjct: 48  NKESDNPFIIECEADGQPEPEYSWIKNGKKFNWQAYDNRMLQQPGRGSLVITSPRDEDRG 107

Query: 194 NYGCNATNSLGYVYKD-VYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRV-FGAPKPEVN 251
           +Y C A+N  G    + VYV          E  K    V+G+  +L C    G P P VN
Sbjct: 108 HYQCFASNEFGTATSNSVYVRKAELNAFKDENSKTLEAVEGEPYMLKCAAPDGFPSPTVN 167

Query: 252 WIHNQ------KELTGGRYTILETGDLKITDVAFADSGE---YTCFARNKLGTAQGSGS- 301
           W+  +      K +   R T+   G+L  ++V   D+     Y C A +   +    G+ 
Sbjct: 168 WMIQEVSDASIKSINNSRMTLDPEGNLWFSNVTREDASADFYYACSATSVFRSEYKIGNK 227

Query: 302 --LTVKEHTHITDQ----PEDYEVEAGQSATFR-------CNAVSDPSLKLSIVWLRGSE 348
             L VK+      Q    P    V   QS   R       C     P  +   VW +  +
Sbjct: 228 VLLDVKQMGVSASQNRHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQ--TVWSKDGQ 285

Query: 349 PIDFESEPRFVQSN-DYSLTVTKSSELDSGQYTC 381
            I +    R  Q +   SL + +++  D+G YTC
Sbjct: 286 RIQWSD--RITQGHYGKSLVIRQTNFDDAGTYTC 317


>gi|193697717|ref|XP_001944384.1| PREDICTED: neuroglian-like [Acyrthosiphon pisum]
          Length = 1247

 Score =  533 bits (1372), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 254/422 (60%), Positives = 317/422 (75%), Gaps = 4/422 (0%)

Query: 5   SRSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQ 64
           + SEYK+GN + LNVI T  +A QN++ P QQYVTR+ EVAL +KKVELFCI+GGTPLP+
Sbjct: 218 TMSEYKLGNPVNLNVIQTAETALQNKYPPTQQYVTRRNEVALLDKKVELFCIYGGTPLPE 277

Query: 65  TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA 124
           T+W KDG+PI  ++R+SQGNYGKSLIIK V+F D+G YTCEVSNGVG  +SY+I+L V+A
Sbjct: 278 TVWLKDGLPIQSNERVSQGNYGKSLIIKKVKFEDKGKYTCEVSNGVGSPQSYNIELDVMA 337

Query: 125 APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
            P+FTV P+ +  AE ET   +C+ASG PEP I W+HNG+P+S+AP NPRR V  N ITI
Sbjct: 338 MPFFTVVPQIVEGAEGETAVIKCEASGNPEPTIKWIHNGRPLSEAPINPRRSVTSNTITI 397

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFG 244
            +L K+DTGNYGCNATNS+GYVYKDVY+NVLA APEITE P    TVDG+ + + C+ FG
Sbjct: 398 TSLIKNDTGNYGCNATNSIGYVYKDVYINVLALAPEITEPPNKVETVDGRAITIGCKNFG 457

Query: 245 APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTV 304
            PKP V W  N  ELTGGRYT L+TGDL+I++V F D+G YTC A N  G+A  SG+LT+
Sbjct: 458 VPKPHVKWTRNNIELTGGRYTTLDTGDLQISEVGFTDAGNYTCIATNNYGSANASGTLTI 517

Query: 305 KEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDY 364
           KEHT IT  PEDYEV AG  ATF C A SD SL L++ WL   EPI+F++EPRFV++NDY
Sbjct: 518 KEHTRITAAPEDYEVVAGSVATFHCTATSDRSLHLNMEWLARDEPINFDTEPRFVKTNDY 577

Query: 365 SLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQV-IDAKKAVVSW 423
           S+T+TK+ ELDSG YTC A+TELD   A A L VQ   + P+   L+ +  + + A V W
Sbjct: 578 SMTITKTIELDSGMYTCLARTELDQATASAMLIVQ---DKPNPPQLLGITCNKRDAAVKW 634

Query: 424 NP 425
            P
Sbjct: 635 QP 636



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 94/193 (48%), Positives = 136/193 (70%), Gaps = 3/193 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+E P N T++ V  ++ A++SW+PVSP+S++G+F+GYK+Q WTE+DGE ++ E  V+ 
Sbjct: 814  IPVETPQNLTVLNVTGSRSAILSWDPVSPESIKGNFKGYKIQFWTERDGENNMIEEQVS- 872

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-IISFVTPEGVPGTVQSLEAIPLGSS 518
             ++TT E+ KF+P +K+F R+LA N  +NGPPS   + F TPEGVPG V  ++A   GSS
Sbjct: 873  SDTTTAEIKKFLPNAKHFVRILAHNSRFNGPPSHPPVVFDTPEGVPGPVHGVDAEQWGSS 932

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            A  L W  PE+ NGVL GY+I Y+++    VG   +R P I+DP  T+AKLA L+P+T Y
Sbjct: 933  AILLSWQPPEEANGVLTGYEISYEAMTQEGVGEKSQR-PSITDPKQTTAKLASLKPATNY 991

Query: 579  RIHLAGYTKAGDG 591
            RI++   TKAG G
Sbjct: 992  RIYIKATTKAGVG 1004



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 152/585 (25%), Positives = 247/585 (42%), Gaps = 41/585 (7%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A  ++ V   C   G P PE  W+ +G PI       +   G + I I+ ++  D G Y 
Sbjct: 258 ALLDKKVELFCIYGGTPLPETVWLKDGLPIQSNERVSQGNYGKSLI-IKKVKFEDKGKYT 316

Query: 197 CNATNSLGYVYK-DVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
           C  +N +G     ++ ++V+A  P  T  P+     +G+T V+ C   G P+P + WIHN
Sbjct: 317 CEVSNGVGSPQSYNIELDVMA-MPFFTVVPQIVEGAEGETAVIKCEASGNPEPTIKWIHN 375

Query: 256 QKELTGG----RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HI 310
            + L+      R ++  +  + IT +   D+G Y C A N +G       + V      I
Sbjct: 376 GRPLSEAPINPRRSVT-SNTITITSLIKNDTGNYGCNATNSIGYVYKDVYINVLALAPEI 434

Query: 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTK 370
           T+ P   E   G++ T  C     P  K  + W R +  +   +  R+   +   L +++
Sbjct: 435 TEPPNKVETVDGRAITIGCKNFGVP--KPHVKWTRNNIEL---TGGRYTTLDTGDLQISE 489

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVS 427
               D+G YTC A        A  TLT++       AP ++   +V+    A       S
Sbjct: 490 VGFTDAGNYTCIATNNYGSANASGTLTIKEHTRITAAPEDY---EVVAGSVATFHCTATS 546

Query: 428 PQSLRGHFRGYKVQTWTEKDGEGSI-RELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
            +SL  +        W  +D   +   E    K    +  + K +         LA    
Sbjct: 547 DRSLHLNME------WLARDEPINFDTEPRFVKTNDYSMTITKTIELDSGMYTCLARTEL 600

Query: 487 YNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKG 546
                S ++        P     L  I        +KW    QP G      ++Y     
Sbjct: 601 DQATASAMLIVQDKPNPP----QLLGITCNKRDAAVKW----QPKGDNRAPILRYTIEYN 652

Query: 547 TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY------V 600
           T   P    +   + P +    +  + P   +   +    K G    S +         V
Sbjct: 653 TSFAPDTWSVASDNVPASGQTYIVPMTPWANFTFRVIAMNKIGRSNPSLHSSVCTTQPDV 712

Query: 601 PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ 660
           P+KNP+NVE  G+TP+NLVISWT MP+IEHNAP  +YR++W++   G+ WN +++ D+  
Sbjct: 713 PYKNPENVEAAGTTPSNLVISWTPMPKIEHNAPGLRYRVYWKQDIPGQVWNSEEITDYTV 772

Query: 661 SELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTE 705
            ELV+ NQPT+Q Y++KVV +  + +     +E+I   GE    E
Sbjct: 773 KELVIDNQPTYQRYKVKVVASNEKGESNVQQKEVIGYSGEDIPVE 817



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 158/388 (40%), Gaps = 43/388 (11%)

Query: 46  LRNKKVELF---CIFGGTPLPQTIWSKDGVPIN---PSDRISQGNYGKSLIIKHVEFSDQ 99
           ++N+ V  F   C   G P P+  W K+G   +     DRI+Q     SL I      D 
Sbjct: 48  VQNQNVRPFVIDCEAEGEPAPKYRWMKNGKNFDWQAYDDRIAQQPGRGSLTITEPRDEDL 107

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEI 157
           G Y C   N  G A S S+ +       F  EP+ ++ A E +     C   +G P+P +
Sbjct: 108 GQYQCFAENAWGTATSKSVMVVKAELNSFKDEPKVYVEAQEGDPFKLVCHPPTGWPKPNV 167

Query: 158 HW-VHNGKPISQAPPNPRRKVGP-NRITIENLRKSDTGN---YGCNATNSLGYVYK---D 209
           +W + N         N R  + P   +   N+ + DT +   Y C A +     YK    
Sbjct: 168 YWLIRNKDGGLTTVNNTRMTLDPEGNLWFSNVTRHDTSDGSTYFCYAESLTMSEYKLGNP 227

Query: 210 VYVNVLAHAPEITE----------APKDEYTVDGKTVVLTCRVFGAPKPEVNW------I 253
           V +NV+  A    +            ++E  +  K V L C   G P PE  W      I
Sbjct: 228 VNLNVIQTAETALQNKYPPTQQYVTRRNEVALLDKKVELFCIYGGTPLPETVWLKDGLPI 287

Query: 254 HNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSG-SLTVKEHTHITD 312
            + + ++ G Y       L I  V F D G+YTC   N +G+ Q     L V      T 
Sbjct: 288 QSNERVSQGNY----GKSLIIKKVKFEDKGKYTCEVSNGVGSPQSYNIELDVMAMPFFTV 343

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFE--SEPRFVQSNDYSLTVTK 370
            P+  E   G++A  +C A  +P  + +I W+    P+     +  R V SN  ++T+T 
Sbjct: 344 VPQIVEGAEGETAVIKCEASGNP--EPTIKWIHNGRPLSEAPINPRRSVTSN--TITITS 399

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTV 398
             + D+G Y C A   + ++     + V
Sbjct: 400 LIKNDTGNYGCNATNSIGYVYKDVYINV 427



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 5/72 (6%)

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
           F+ Y+I   Q WTE+DGE ++ E  V+  ++TT E+ KF+P +K+F R+LA N  +NGPP
Sbjct: 849 FKGYKI---QFWTERDGENNMIEEQVS-SDTTTAEIKKFLPNAKHFVRILAHNSRFNGPP 904

Query: 731 SE-IISFVTPEG 741
           S   + F TPEG
Sbjct: 905 SHPPVVFDTPEG 916


>gi|198467260|ref|XP_001354326.2| GA14061 [Drosophila pseudoobscura pseudoobscura]
 gi|198149415|gb|EAL31379.2| GA14061 [Drosophila pseudoobscura pseudoobscura]
          Length = 1309

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 255/420 (60%), Positives = 313/420 (74%), Gaps = 2/420 (0%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           RSEYKIGN++LL+V   G+SASQN+H P +QYV+R++ +ALR K++ELFCI+GGTPLPQT
Sbjct: 218 RSEYKIGNKVLLDVKQMGVSASQNKHQPIRQYVSRRQSLALRGKRMELFCIYGGTPLPQT 277

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +WSKDG  I  SDRI+QG+YGKSLII+   F D G+YTC+VSNGVG A+S+SI L V A 
Sbjct: 278 VWSKDGHRIQWSDRITQGHYGKSLIIRQTNFDDNGTYTCDVSNGVGNAQSFSIILEVNAI 337

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFTVEP+F  AAE+E V F+C+A+G PEP+I W+HNGKPI Q+ PNPRR V  N I I 
Sbjct: 338 PYFTVEPDFKTAAEDEEVVFQCEAAGFPEPKISWIHNGKPIEQSTPNPRRTVTDNTIRIV 397

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
           NL KSDTGNYGCNATNSLGYVYKDV++NV A  PEI E P    TVDG+ V L CRV GA
Sbjct: 398 NLVKSDTGNYGCNATNSLGYVYKDVFLNVQALPPEIEEPPTALSTVDGRNVTLRCRVTGA 457

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP+V W+     LTGGRY +   GDL+I DV F+D+G+YTC+A NK G     GSLTV 
Sbjct: 458 PKPQVRWLRATNWLTGGRYIVQANGDLQILDVTFSDAGQYTCYAENKFGNKSAEGSLTVM 517

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           EHT IT +P++YEV AGQSATFRCN   D +L++ I W +  +PIDFE++PRFV++ND S
Sbjct: 518 EHTRITQEPQNYEVAAGQSATFRCNEAHDGNLEIEIDWWKDGQPIDFEAQPRFVKTNDNS 577

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           LT+ K+ ELDSG+YTC A+T LD   A+A L VQ    AP   T I    A KA + W P
Sbjct: 578 LTIAKTMELDSGEYTCVARTRLDEATAKANLIVQDVPNAPK-LTGI-TCQADKAEIMWEP 635



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 123/249 (49%), Positives = 163/249 (65%), Gaps = 11/249 (4%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            PL+AP+NFT+ Q+  A  A ++W PVS +S+RGHF+GYK+QTWTEK+GE  +RE+ V KG
Sbjct: 814  PLDAPTNFTMRQITTATSAYLAWTPVSEESVRGHFKGYKIQTWTEKEGEEGLREIHV-KG 872

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
            ++ T  V +F P SKNFAR+LA+NG +NGPPS +I F TPEGVP  VQSL+A PLGSSAF
Sbjct: 873  DTDTALVTQFKPDSKNFARILAYNGRFNGPPSAVIDFDTPEGVPSPVQSLDAHPLGSSAF 932

Query: 521  YLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRI 580
            ++ W KP  PNG L GYKI Y+ V+G+ VG   E  P+I+DP  T  K+AGL+P TKYRI
Sbjct: 933  WVTWKKPLHPNGKLTGYKIYYEEVQGSFVGERREYDPHITDPRITRMKMAGLKPKTKYRI 992

Query: 581  HLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
             +   TK G+G E     Y+      +     +TP+    +W  +P     A   K+RI 
Sbjct: 993  SITATTKMGEGTE----HYIEKSTLGDSNLAPATPS---FAWEQLPSDNGQA---KFRIN 1042

Query: 641  WRRHNTGEA 649
            W+    G A
Sbjct: 1043 WQPSTEGHA 1051



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 157/590 (26%), Positives = 245/590 (41%), Gaps = 55/590 (9%)

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV 206
           C   G P P+  W  +G  I  +    +   G + I I      D G Y C+ +N +G  
Sbjct: 267 CIYGGTPLPQTVWSKDGHRIQWSDRITQGHYGKSLI-IRQTNFDDNGTYTCDVSNGVGNA 325

Query: 207 YKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG---- 262
                +  +   P  T  P  +   + + VV  C   G P+P+++WIHN K +       
Sbjct: 326 QSFSIILEVNAIPYFTVEPDFKTAAEDEEVVFQCEAAGFPEPKISWIHNGKPIEQSTPNP 385

Query: 263 RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPEDYEVEA 321
           R T+ +   ++I ++  +D+G Y C A N LG       L V+     I + P       
Sbjct: 386 RRTVTDN-TIRIVNLVKSDTGNYGCNATNSLGYVYKDVFLNVQALPPEIEEPPTALSTVD 444

Query: 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTC 381
           G++ T RC     P  K  + WLR +   ++ +  R++   +  L +   +  D+GQYTC
Sbjct: 445 GRNVTLRCRVTGAP--KPQVRWLRAT---NWLTGGRYIVQANGDLQILDVTFSDAGQYTC 499

Query: 382 RAQTELDFIEAQATLTVQVPL---EAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGY 438
            A+ +     A+ +LTV       + P N+   +V   + A    N     +L       
Sbjct: 500 YAENKFGNKSAEGSLTVMEHTRITQEPQNY---EVAAGQSATFRCNEAHDGNLE-----I 551

Query: 439 KVQTWTEK---DGEGSIRELIVNKGEST---TTEVDKFVPASKNFARVLAFNGAYNGPPS 492
           ++  W +    D E   R +  N    T   T E+D          R+       N    
Sbjct: 552 EIDWWKDGQPIDFEAQPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEATAKAN---- 607

Query: 493 EIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPL 552
                +  + VP   + L  I   +    + W         ++ Y I++     T   P 
Sbjct: 608 -----LIVQDVPNAPK-LTGITCQADKAEIMWEPQGDNRSPILHYTIQFN----TSFTPA 657

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY------VPFKNPD 606
                +   P T  + +  + P   Y   +  + K G    S +         VPFKNPD
Sbjct: 658 SWDTAFEKVPNTDFSFVVQMSPWANYTFRVIAFNKIGASQPSAHSESCTTQPDVPFKNPD 717

Query: 607 NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLA 666
           NV G+G+ PNNLVISWT MPEIEHNAP F+YR+ W+R     AW   D+ +W Q+ +V+ 
Sbjct: 718 NVVGQGTEPNNLVISWTPMPEIEHNAPKFQYRVSWKRDIPAAAWENKDINEWHQNNIVIT 777

Query: 667 NQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 716
           +QPTF  Y IKVV      +   +  E+I   GE      D+ + A  NF
Sbjct: 778 DQPTFVKYHIKVVAINERGESNVAAEEVIGYSGE------DRPLDAPTNF 821



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 104/420 (24%), Positives = 171/420 (40%), Gaps = 52/420 (12%)

Query: 43  EVALRNKKVE----LFCIFGGTPLPQTIWSKDGVPIN---PSDRISQGNYGKSLIIKHVE 95
           +VA +NK+ +    + C   G P P+  W K+G   +     DR+ +     +L+I   +
Sbjct: 42  KVAQQNKESDNPFIIECEADGQPEPEYSWIKNGKKFDWQAYDDRMLRQPGRGTLVITSPK 101

Query: 96  FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECKA-SGLP 153
             D+G Y C  SN  G A S S+ +       F  E  + + A E E    +C A  G P
Sbjct: 102 DEDRGHYQCFASNEFGTATSNSVYVRKAELNAFKDEAAKTVVAVEGEPFMLKCAAPDGFP 161

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--------NLRKSDTGN---YGCNATNS 202
            P ++W+     + Q+     + +  +R+T++        N+ + D  +   Y C+AT+ 
Sbjct: 162 SPTVNWM-----MQQSIDGSIKSINNSRMTLDPEGNLWFSNVTRDDASDDFYYACSATSV 216

Query: 203 LGYVYK---DVYVNVL---AHAPEITEAPKDEY-------TVDGKTVVLTCRVFGAPKPE 249
               YK    V ++V      A +    P  +Y        + GK + L C   G P P+
Sbjct: 217 FRSEYKIGNKVLLDVKQMGVSASQNKHQPIRQYVSRRQSLALRGKRMELFCIYGGTPLPQ 276

Query: 250 VNW------IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG-SGSL 302
             W      I     +T G Y       L I    F D+G YTC   N +G AQ  S  L
Sbjct: 277 TVWSKDGHRIQWSDRITQGHY----GKSLIIRQTNFDDNGTYTCDVSNGVGNAQSFSIIL 332

Query: 303 TVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
            V    + T +P+       +   F+C A   P  K+S  W+   +PI+  +        
Sbjct: 333 EVNAIPYFTVEPDFKTAAEDEEVVFQCEAAGFPEPKIS--WIHNGKPIEQSTPNPRRTVT 390

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVV 421
           D ++ +    + D+G Y C A   L ++     L VQ +P E     T +  +D +   +
Sbjct: 391 DNTIRIVNLVKSDTGNYGCNATNSLGYVYKDVFLNVQALPPEIEEPPTALSTVDGRNVTL 450



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/71 (57%), Positives = 53/71 (74%), Gaps = 4/71 (5%)

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
           F+ Y+I   QTWTEK+GE  +RE+ V KG++ T  V +F P SKNFAR+LA+NG +NGPP
Sbjct: 848 FKGYKI---QTWTEKEGEEGLREIHV-KGDTDTALVTQFKPDSKNFARILAYNGRFNGPP 903

Query: 731 SEIISFVTPEG 741
           S +I F TPEG
Sbjct: 904 SAVIDFDTPEG 914


>gi|347964368|ref|XP_003437079.1| AGAP000720-PB [Anopheles gambiae str. PEST]
 gi|333467499|gb|EGK96582.1| AGAP000720-PB [Anopheles gambiae str. PEST]
          Length = 1271

 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 255/419 (60%), Positives = 320/419 (76%), Gaps = 4/419 (0%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           RSEYKIGNR+LL V  TGISA+QNRH P++QYV+RK EVAL+ K++ELFCI+GGTPLP+T
Sbjct: 227 RSEYKIGNRVLLQVKQTGISAAQNRHPPQRQYVSRKNEVALKGKQIELFCIYGGTPLPET 286

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +W+K+G  I  +D+I Q NYGKSL I+ V   D G+YTCEVSNGVG+A SYSI+L+V A 
Sbjct: 287 VWTKNGRAIVWNDKIQQDNYGKSLKIRRVSSEDAGTYTCEVSNGVGQADSYSINLAVNAV 346

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFTVEPE +NAAE ET  F+C+A+G P+P I W+HNGK I  +  N RR VG + I I 
Sbjct: 347 PYFTVEPEIVNAAEGETAEFKCEAAGNPKPNIMWIHNGKQIDVSQGNARRIVGSSSIYIS 406

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
            L+KSDTGNYGCNATNSLGYVYKDVY+NVLA APEIT+ PK E+TVD + V +TCRVFGA
Sbjct: 407 KLQKSDTGNYGCNATNSLGYVYKDVYLNVLALAPEITDPPKREFTVDQRNVTMTCRVFGA 466

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP+V W+ N +ELTGGRY  + +GDL I DV F D+GEYTC A N LG+   SG L VK
Sbjct: 467 PKPQVKWLRNDRELTGGRYQTMPSGDLFIRDVKFDDAGEYTCHAVNNLGSKSASGELIVK 526

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           E T I D P+DYE EAG + TFRCNA++D SL+L+I WL   E IDFE++PRF++++D S
Sbjct: 527 ERTVINDPPQDYEAEAGTTVTFRCNAIADSSLELTIEWLTKGEIIDFENQPRFIRTSDNS 586

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQV-IDAKKAVVSW 423
           L ++K+ ELD+G YTC A+T+LD + A ATLTV   ++ P+  TL +V    K A + W
Sbjct: 587 LMISKTIELDTGTYTCLARTDLDEVMANATLTV---MDRPNPPTLTRVNCKGKVAQIEW 642



 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 217/603 (35%), Positives = 301/603 (49%), Gaps = 75/603 (12%)

Query: 41   KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR-ISQGNY----GKSLIIKHVE 95
            K+E  +  + V + C   G P PQ  W ++       DR ++ G Y       L I+ V+
Sbjct: 447  KREFTVDQRNVTMTCRVFGAPKPQVKWLRN-------DRELTGGRYQTMPSGDLFIRDVK 499

Query: 96   FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA---SGL 152
            F D G YTC   N +G +KS S +L V         P+   A    TVTF C A   S L
Sbjct: 500  FDDAGEYTCHAVNNLG-SKSASGELIVKERTVINDPPQDYEAEAGTTVTFRCNAIADSSL 558

Query: 153  PEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYV 212
             E  I W+  G+ I         +   N + I    + DTG Y C A   L  V  +  +
Sbjct: 559  -ELTIEWLTKGEIIDFENQPRFIRTSDNSLMISKTIELDTGTYTCLARTDLDEVMANATL 617

Query: 213  NVL--AHAPEITEAPKDEYTVDGKTVVLTCRVFGAPK-PEVNWI-HNQKELTGGRYTILE 268
             V+   + P +T          GK   +     G  + P +N+I       T   Y +L 
Sbjct: 618  TVMDRPNPPTLTRV-----NCKGKVAQIEWISNGDNRSPILNYIIEYNTSFTPDTYDVL- 671

Query: 269  TGDLKITDVAFA------DSGEYTCFARNKLGTAQGSG--SLTVKEHTHITDQPEDYEVE 320
            + D+  TD A+       ++  +   A NK+G +  SG   +   E +     P++ E E
Sbjct: 672  SDDVPGTDFAWTVNTTPWNNYTFRVIAVNKVGRSLPSGHSDVCTTESSVPYKNPDNLEGE 731

Query: 321  AGQSAT-----FRCNAVSD---PSLKLSIVWLR---GSE------------PIDFESEPR 357
             G + T     +R  A  D   P L   + W R   G+E                E  P 
Sbjct: 732  -GTTPTNLVIKWRPLAQVDHNAPGLHYRVYWRRDIPGAEWNSADVRDWRQSSYTVEGLPT 790

Query: 358  FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAK 417
            F + +   + +    E +SG +   A +  D            PL+AP+NFTLIQV    
Sbjct: 791  FTRYSVKVVALNDRGEANSGPWEIMAYSGED-----------TPLDAPANFTLIQVTGPT 839

Query: 418  KAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 477
             A++SWNPV+P+SLRGHF+GYK+QTWTE DGE ++RE+++   +S    V  FVP + N+
Sbjct: 840  AAILSWNPVTPESLRGHFKGYKIQTWTEADGEENLREILIT-ADSKQALVTDFVPDATNY 898

Query: 478  ARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
            AR+LA+NG YNGP S  +SF TPEGVP T+Q+LEA PLGSSAF L+W KP QPNG L GY
Sbjct: 899  ARILAYNGRYNGPASTTLSFDTPEGVPNTIQALEAYPLGSSAFLLRWKKPLQPNGKLTGY 958

Query: 538  KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL 597
            +I Y+ VKGT VGP +ER P+ISDP    AKL  L+P+ KYRIH+   TKAG+G +    
Sbjct: 959  RIYYEEVKGTTVGPRMEREPHISDPAVLEAKLGRLKPAAKYRIHVVATTKAGEGQD---- 1014

Query: 598  FYV 600
            FY+
Sbjct: 1015 FYI 1017



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 165/397 (41%), Gaps = 32/397 (8%)

Query: 30  RHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI---NPSDRISQGNYG 86
           +  P  + + +  +    +K   + C   G P P+  W K+G         DR+SQ    
Sbjct: 43  KQPPPDEMLFQVAQQGESDKPFLIECEAEGEPTPKYRWIKNGKKFEWQTYDDRMSQQPGR 102

Query: 87  KSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV-EPEFINAAEEETVTF 145
            +L+I      D G Y C   N  G A S S+ +       F    P+ + A E +    
Sbjct: 103 GTLVITSPRDEDLGQYQCFAENEHGTATSNSVFVRKAELNSFKDGSPQTLQADEGKPFKL 162

Query: 146 ECK-ASGLPEPEIHW-VHNGKPISQAPPNPRRKVGP-NRITIENLRKSDTGN---YGCNA 199
            C+   G P+P ++W + N     ++  N R  + P   +   N+ + D  N   Y C A
Sbjct: 163 VCQPPDGWPKPNVYWMIQNMDGGIRSINNSRMTLDPEGNLWFSNVTRDDESNDFFYACAA 222

Query: 200 TNSLGYVYK---DVYVNVLA---------HAPEITE-APKDEYTVDGKTVVLTCRVFGAP 246
           ++     YK    V + V           H P+    + K+E  + GK + L C   G P
Sbjct: 223 SSVFRSEYKIGNRVLLQVKQTGISAAQNRHPPQRQYVSRKNEVALKGKQIELFCIYGGTP 282

Query: 247 KPEVNWIHNQKELTGGRYTILET--GDLKITDVAFADSGEYTCFARNKLGTAQG-SGSLT 303
            PE  W  N + +        +     LKI  V+  D+G YTC   N +G A   S +L 
Sbjct: 283 LPETVWTKNGRAIVWNDKIQQDNYGKSLKIRRVSSEDAGTYTCEVSNGVGQADSYSINLA 342

Query: 304 VKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFE--SEPRFVQS 361
           V    + T +PE      G++A F+C A  +P  K +I+W+   + ID    +  R V S
Sbjct: 343 VNAVPYFTVEPEIVNAAEGETAEFKCEAAGNP--KPNIMWIHNGKQIDVSQGNARRIVGS 400

Query: 362 NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           +  S+ ++K  + D+G Y C A   L ++     L V
Sbjct: 401 S--SIYISKLQKSDTGNYGCNATNSLGYVYKDVYLNV 435



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 4/71 (5%)

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
           F+ Y+I   QTWTE DGE ++RE+++   +S    V  FVP + N+AR+LA+NG YNGP 
Sbjct: 857 FKGYKI---QTWTEADGEENLREILIT-ADSKQALVTDFVPDATNYARILAYNGRYNGPA 912

Query: 731 SEIISFVTPEG 741
           S  +SF TPEG
Sbjct: 913 STTLSFDTPEG 923


>gi|347964370|ref|XP_311259.5| AGAP000720-PA [Anopheles gambiae str. PEST]
 gi|333467498|gb|EAA45046.5| AGAP000720-PA [Anopheles gambiae str. PEST]
          Length = 1260

 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 255/419 (60%), Positives = 320/419 (76%), Gaps = 4/419 (0%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           RSEYKIGNR+LL V  TGISA+QNRH P++QYV+RK EVAL+ K++ELFCI+GGTPLP+T
Sbjct: 227 RSEYKIGNRVLLQVKQTGISAAQNRHPPQRQYVSRKNEVALKGKQIELFCIYGGTPLPET 286

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +W+K+G  I  +D+I Q NYGKSL I+ V   D G+YTCEVSNGVG+A SYSI+L+V A 
Sbjct: 287 VWTKNGRAIVWNDKIQQDNYGKSLKIRRVSSEDAGTYTCEVSNGVGQADSYSINLAVNAV 346

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFTVEPE +NAAE ET  F+C+A+G P+P I W+HNGK I  +  N RR VG + I I 
Sbjct: 347 PYFTVEPEIVNAAEGETAEFKCEAAGNPKPNIMWIHNGKQIDVSQGNARRIVGSSSIYIS 406

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
            L+KSDTGNYGCNATNSLGYVYKDVY+NVLA APEIT+ PK E+TVD + V +TCRVFGA
Sbjct: 407 KLQKSDTGNYGCNATNSLGYVYKDVYLNVLALAPEITDPPKREFTVDQRNVTMTCRVFGA 466

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP+V W+ N +ELTGGRY  + +GDL I DV F D+GEYTC A N LG+   SG L VK
Sbjct: 467 PKPQVKWLRNDRELTGGRYQTMPSGDLFIRDVKFDDAGEYTCHAVNNLGSKSASGELIVK 526

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           E T I D P+DYE EAG + TFRCNA++D SL+L+I WL   E IDFE++PRF++++D S
Sbjct: 527 ERTVINDPPQDYEAEAGTTVTFRCNAIADSSLELTIEWLTKGEIIDFENQPRFIRTSDNS 586

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQV-IDAKKAVVSW 423
           L ++K+ ELD+G YTC A+T+LD + A ATLTV   ++ P+  TL +V    K A + W
Sbjct: 587 LMISKTIELDTGTYTCLARTDLDEVMANATLTV---MDRPNPPTLTRVNCKGKVAQIEW 642



 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 217/603 (35%), Positives = 301/603 (49%), Gaps = 75/603 (12%)

Query: 41   KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR-ISQGNY----GKSLIIKHVE 95
            K+E  +  + V + C   G P PQ  W ++       DR ++ G Y       L I+ V+
Sbjct: 447  KREFTVDQRNVTMTCRVFGAPKPQVKWLRN-------DRELTGGRYQTMPSGDLFIRDVK 499

Query: 96   FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA---SGL 152
            F D G YTC   N +G +KS S +L V         P+   A    TVTF C A   S L
Sbjct: 500  FDDAGEYTCHAVNNLG-SKSASGELIVKERTVINDPPQDYEAEAGTTVTFRCNAIADSSL 558

Query: 153  PEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYV 212
             E  I W+  G+ I         +   N + I    + DTG Y C A   L  V  +  +
Sbjct: 559  -ELTIEWLTKGEIIDFENQPRFIRTSDNSLMISKTIELDTGTYTCLARTDLDEVMANATL 617

Query: 213  NVL--AHAPEITEAPKDEYTVDGKTVVLTCRVFGAPK-PEVNWI-HNQKELTGGRYTILE 268
             V+   + P +T          GK   +     G  + P +N+I       T   Y +L 
Sbjct: 618  TVMDRPNPPTLTRV-----NCKGKVAQIEWISNGDNRSPILNYIIEYNTSFTPDTYDVL- 671

Query: 269  TGDLKITDVAFA------DSGEYTCFARNKLGTAQGSG--SLTVKEHTHITDQPEDYEVE 320
            + D+  TD A+       ++  +   A NK+G +  SG   +   E +     P++ E E
Sbjct: 672  SDDVPGTDFAWTVNTTPWNNYTFRVIAVNKVGRSLPSGHSDVCTTESSVPYKNPDNLEGE 731

Query: 321  AGQSAT-----FRCNAVSD---PSLKLSIVWLR---GSE------------PIDFESEPR 357
             G + T     +R  A  D   P L   + W R   G+E                E  P 
Sbjct: 732  -GTTPTNLVIKWRPLAQVDHNAPGLHYRVYWRRDIPGAEWNSADVRDWRQSSYTVEGLPT 790

Query: 358  FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAK 417
            F + +   + +    E +SG +   A +  D            PL+AP+NFTLIQV    
Sbjct: 791  FTRYSVKVVALNDRGEANSGPWEIMAYSGED-----------TPLDAPANFTLIQVTGPT 839

Query: 418  KAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 477
             A++SWNPV+P+SLRGHF+GYK+QTWTE DGE ++RE+++   +S    V  FVP + N+
Sbjct: 840  AAILSWNPVTPESLRGHFKGYKIQTWTEADGEENLREILIT-ADSKQALVTDFVPDATNY 898

Query: 478  ARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
            AR+LA+NG YNGP S  +SF TPEGVP T+Q+LEA PLGSSAF L+W KP QPNG L GY
Sbjct: 899  ARILAYNGRYNGPASTTLSFDTPEGVPNTIQALEAYPLGSSAFLLRWKKPLQPNGKLTGY 958

Query: 538  KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL 597
            +I Y+ VKGT VGP +ER P+ISDP    AKL  L+P+ KYRIH+   TKAG+G +    
Sbjct: 959  RIYYEEVKGTTVGPRMEREPHISDPAVLEAKLGRLKPAAKYRIHVVATTKAGEGQD---- 1014

Query: 598  FYV 600
            FY+
Sbjct: 1015 FYI 1017



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 165/397 (41%), Gaps = 32/397 (8%)

Query: 30  RHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI---NPSDRISQGNYG 86
           +  P  + + +  +    +K   + C   G P P+  W K+G         DR+SQ    
Sbjct: 43  KQPPPDEMLFQVAQQGESDKPFLIECEAEGEPTPKYRWIKNGKKFEWQTYDDRMSQQPGR 102

Query: 87  KSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV-EPEFINAAEEETVTF 145
            +L+I      D G Y C   N  G A S S+ +       F    P+ + A E +    
Sbjct: 103 GTLVITSPRDEDLGQYQCFAENEHGTATSNSVFVRKAELNSFKDGSPQTLQADEGKPFKL 162

Query: 146 ECK-ASGLPEPEIHW-VHNGKPISQAPPNPRRKVGP-NRITIENLRKSDTGN---YGCNA 199
            C+   G P+P ++W + N     ++  N R  + P   +   N+ + D  N   Y C A
Sbjct: 163 VCQPPDGWPKPNVYWMIQNMDGGIRSINNSRMTLDPEGNLWFSNVTRDDESNDFFYACAA 222

Query: 200 TNSLGYVYK---DVYVNVLA---------HAPEITE-APKDEYTVDGKTVVLTCRVFGAP 246
           ++     YK    V + V           H P+    + K+E  + GK + L C   G P
Sbjct: 223 SSVFRSEYKIGNRVLLQVKQTGISAAQNRHPPQRQYVSRKNEVALKGKQIELFCIYGGTP 282

Query: 247 KPEVNWIHNQKELTGGRYTILET--GDLKITDVAFADSGEYTCFARNKLGTAQG-SGSLT 303
            PE  W  N + +        +     LKI  V+  D+G YTC   N +G A   S +L 
Sbjct: 283 LPETVWTKNGRAIVWNDKIQQDNYGKSLKIRRVSSEDAGTYTCEVSNGVGQADSYSINLA 342

Query: 304 VKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFE--SEPRFVQS 361
           V    + T +PE      G++A F+C A  +P  K +I+W+   + ID    +  R V S
Sbjct: 343 VNAVPYFTVEPEIVNAAEGETAEFKCEAAGNP--KPNIMWIHNGKQIDVSQGNARRIVGS 400

Query: 362 NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           +  S+ ++K  + D+G Y C A   L ++     L V
Sbjct: 401 S--SIYISKLQKSDTGNYGCNATNSLGYVYKDVYLNV 435



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 4/71 (5%)

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
           F+ Y+I   QTWTE DGE ++RE+++   +S    V  FVP + N+AR+LA+NG YNGP 
Sbjct: 857 FKGYKI---QTWTEADGEENLREILIT-ADSKQALVTDFVPDATNYARILAYNGRYNGPA 912

Query: 731 SEIISFVTPEG 741
           S  +SF TPEG
Sbjct: 913 STTLSFDTPEG 923


>gi|386764048|ref|NP_001245581.1| neuroglian, isoform G [Drosophila melanogaster]
 gi|383293281|gb|AFH07295.1| neuroglian, isoform G [Drosophila melanogaster]
          Length = 1309

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 266/490 (54%), Positives = 338/490 (68%), Gaps = 11/490 (2%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           RSEYKIGN++LL+V   G+SASQN+H P +QYV+R++ +ALR K++ELFCI+GGTPLPQT
Sbjct: 219 RSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQT 278

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +WSKDG  I  SDRI+QG+YGKSL+I+   F D G+YTC+VSNGVG A+S+SI L+V + 
Sbjct: 279 VWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIILNVNSV 338

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFT EPE   AAE+E V FEC+A+G+PEP+I W+HNGKPI Q+ PNPRR V  N I I 
Sbjct: 339 PYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNPRRTVTDNTIRII 398

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
           NL K DTGNYGCNATNSLGYVYKDVY+NV A  P I+EAP    TVDG+ V + CRV G+
Sbjct: 399 NLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVDGRNVTIKCRVNGS 458

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP V W+     LTGGRY +   GDL+I DV F+D+G+YTC+A+NK G  Q  GSL VK
Sbjct: 459 PKPLVKWLRASNWLTGGRYNVQANGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVK 518

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           EHT IT +P++YEV AGQSATFRCN   D +L++ I W +  + IDFE++PRFV++ND S
Sbjct: 519 EHTRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSIDFEAQPRFVKTNDNS 578

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           LT+ K+ ELDSG+YTC A+T LD   A+A L VQ    AP   T I    A KA + W  
Sbjct: 579 LTIAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAPK-LTGI-TCQADKAEIHWEQ 636

Query: 426 VSPQSLRGHFRGYKVQ---TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLA 482
                 R     Y +Q   ++T    + +  E + N   S   ++    P +    RV+A
Sbjct: 637 QGDN--RSPILHYTIQFNTSFTPASWDAAY-EKVPNTDSSFVVQMS---PWANYTFRVIA 690

Query: 483 FNGAYNGPPS 492
           FN     PPS
Sbjct: 691 FNKIGASPPS 700



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 118/241 (48%), Positives = 156/241 (64%), Gaps = 10/241 (4%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            PL+AP+NFT+ Q+  +    ++W PVS +S+RGHF+GYK+QTWTE +GE  +RE+ V KG
Sbjct: 815  PLDAPTNFTMRQITSSTSGYMAWTPVSEESVRGHFKGYKIQTWTENEGEEGLREIHV-KG 873

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
            ++    V +F P SKN+AR+LA+NG +NGPPS +I F TPEGVP  VQ L+A PLGSSAF
Sbjct: 874  DTHNALVTQFKPDSKNYARILAYNGRFNGPPSAVIDFDTPEGVPSPVQGLDAYPLGSSAF 933

Query: 521  YLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRI 580
             L W KP  PNG L GYKI Y+ VK + VG   E  P+I+DP  T  K+AGL+P++KYRI
Sbjct: 934  MLHWKKPLYPNGKLTGYKIYYEEVKESYVGERREYDPHITDPRVTRMKMAGLKPNSKYRI 993

Query: 581  HLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
             +   TK G+G+E  Y+     K+  NV      P     SW  +P     A   K+RI 
Sbjct: 994  SITATTKMGEGSE-HYIEKTTLKDAVNV-----APATPSFSWEQLPSDNGLA---KFRIN 1044

Query: 641  W 641
            W
Sbjct: 1045 W 1045



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 163/597 (27%), Positives = 257/597 (43%), Gaps = 69/597 (11%)

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV 206
           C   G P P+  W  +G+ I  +    +   G + + I      D G Y C+ +N +G  
Sbjct: 268 CIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKS-LVIRQTNFDDAGTYTCDVSNGVGNA 326

Query: 207 YKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG---- 262
                +  +   P  T+ P+     + + VV  CR  G P+P+++WIHN K +       
Sbjct: 327 QSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNP 386

Query: 263 RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK-EHTHITDQPEDYEVEA 321
           R T+ +   ++I ++   D+G Y C A N LG       L V+ E   I++ P       
Sbjct: 387 RRTVTDN-TIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVD 445

Query: 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF-VQSNDYSLTVTKSSELDSGQYT 380
           G++ T +C     P  K  + WLR S   ++ +  R+ VQ+N   L +   +  D+G+YT
Sbjct: 446 GRNVTIKCRVNGSP--KPLVKWLRAS---NWLTGGRYNVQANG-DLEIQDVTFSDAGKYT 499

Query: 381 CRAQTELDFIEAQATLTVQVPL---EAPSNFTLIQVIDAKKAVVSWNPVSPQSLR----- 432
           C AQ +   I+A  +L V+      + P N+   +V   + A    N     +L      
Sbjct: 500 CYAQNKFGEIQADGSLVVKEHTRITQEPQNY---EVAAGQSATFRCNEAHDDTLEIEIDW 556

Query: 433 ---GHFRGYKVQTWTEKDGEGSI---RELIVNKGESTTTEVDKFVPASKNFARV-LAFNG 485
              G    ++ Q    K  + S+   + + ++ GE T     +   A+   AR  L    
Sbjct: 557 WKDGQSIDFEAQPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEAT---ARANLIVQD 613

Query: 486 AYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVK 545
             N P                   L  I   +    + W +       ++ Y I++    
Sbjct: 614 VPNAP------------------KLTGITCQADKAEIHWEQQGDNRSPILHYTIQFN--- 652

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY------ 599
            T   P      Y   P T S+ +  + P   Y   +  + K G    S +         
Sbjct: 653 -TSFTPASWDAAYEKVPNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPD 711

Query: 600 VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
           VPFKNPDNV G+G+ PNNLVISWT MPEIEHNAP+F Y + W+R     AW  +++ DWR
Sbjct: 712 VPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWR 771

Query: 660 QSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 716
           Q+ +V+A+QPTF  Y IKVV      +   +  E++   GE      D+ + A  NF
Sbjct: 772 QNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGE------DRPLDAPTNF 822



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 170/423 (40%), Gaps = 58/423 (13%)

Query: 43  EVALRNKKVE----LFCIFGGTPLPQTIWSKDGVPIN---PSDRISQGNYGKSLIIKHVE 95
           +VA +NK+ +    + C   G P P+  W K+G   +     +R+ +     +L+I   +
Sbjct: 43  KVAQQNKESDNPFIIECEADGQPEPEYSWIKNGKKFDWQAYDNRMLRQPGRGTLVITIPK 102

Query: 96  FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECKA-SGLP 153
             D+G Y C  SN  G A S S+ +       F  E  + + A E E    +C A  G P
Sbjct: 103 DEDRGHYQCFASNEFGTATSNSVYVRKAELNAFKDEAAKTLEAVEGEPFMLKCAAPDGFP 162

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--------NLRKSDTGN---YGCNATNS 202
            P ++W+     I ++     + +  +R+T++        N+ + D  +   Y C+AT+ 
Sbjct: 163 SPTVNWM-----IQESIDGSIKSINNSRMTLDPEGNLWFSNVTREDASSDFYYACSATSV 217

Query: 203 LGYVYK---DVYVNVL---AHAPEITEAPKDEY-------TVDGKTVVLTCRVFGAPKPE 249
               YK    V ++V      A +    P  +Y        + GK + L C   G P P+
Sbjct: 218 FRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQ 277

Query: 250 VNW------IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG-SGSL 302
             W      I     +T G Y       L I    F D+G YTC   N +G AQ  S  L
Sbjct: 278 TVWSKDGQRIQWSDRITQGHY----GKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIIL 333

Query: 303 TVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
            V    + T +PE       +   F C A   P  K+S  W+   +PI+  +        
Sbjct: 334 NVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKIS--WIHNGKPIEQSTPNPRRTVT 391

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP----LEAPSNFTLIQVIDAKK 418
           D ++ +    + D+G Y C A   L ++     L VQ       EAP+    +  +D + 
Sbjct: 392 DNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPA---AVSTVDGRN 448

Query: 419 AVV 421
             +
Sbjct: 449 VTI 451



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/71 (53%), Positives = 51/71 (71%), Gaps = 4/71 (5%)

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
           F+ Y+I   QTWTE +GE  +RE+ V KG++    V +F P SKN+AR+LA+NG +NGPP
Sbjct: 849 FKGYKI---QTWTENEGEEGLREIHV-KGDTHNALVTQFKPDSKNYARILAYNGRFNGPP 904

Query: 731 SEIISFVTPEG 741
           S +I F TPEG
Sbjct: 905 SAVIDFDTPEG 915


>gi|194891060|ref|XP_001977430.1| GG18259 [Drosophila erecta]
 gi|190649079|gb|EDV46357.1| GG18259 [Drosophila erecta]
          Length = 1239

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 266/490 (54%), Positives = 338/490 (68%), Gaps = 11/490 (2%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           RSEYKIGN++LL+V   G+SASQN+H P +QYV+R++ +ALR K++ELFCI+GGTPLPQT
Sbjct: 219 RSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQT 278

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +WSKDG  I  SDRI+QG+YGKSL+I+   F D G+YTC+VSNGVG A+S+SI L+V + 
Sbjct: 279 VWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIILNVNSV 338

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFT EPE   AAE+E V FEC+A+G+PEP+I W+HNGKPI Q+ PNPRR V  N I I 
Sbjct: 339 PYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNPRRTVTDNTIRII 398

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
           NL K DTGNYGCNATNSLGYVYKDVY+NV A  P I EAP    TVDG+ V + CRV G+
Sbjct: 399 NLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTIAEAPAAVSTVDGRNVTIKCRVNGS 458

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP V W+ +   LTGGRY +   GDL+I DV F+D+G+YTC+A+NK G  Q  GSL VK
Sbjct: 459 PKPLVKWLRSSNWLTGGRYNVQANGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVK 518

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           EHT IT +P++YEV AGQSATFRCN   D +L++ I W +  + IDFE++PRFV++ND S
Sbjct: 519 EHTRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSIDFETQPRFVKANDNS 578

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           LT+ K+ ELDSG+YTC A+T LD   A+A L VQ    AP   T I    A KA + W  
Sbjct: 579 LTIAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAPK-LTGI-TCQADKAEIHWEQ 636

Query: 426 VSPQSLRGHFRGYKVQ---TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLA 482
                 R     Y +Q   ++T    + +  E + N   S   ++    P +    RV+A
Sbjct: 637 QGDN--RSPILHYTIQFNTSFTPASWDAAY-EKVPNTDSSFVVQMS---PWANYTFRVIA 690

Query: 483 FNGAYNGPPS 492
           FN     PPS
Sbjct: 691 FNKIGASPPS 700



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 120/247 (48%), Positives = 159/247 (64%), Gaps = 10/247 (4%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            PL+AP+NFT+ Q+  +    ++W PVS +S+RGHF+GYK+QTWTE +GE  +RE+ V KG
Sbjct: 815  PLDAPTNFTMRQITSSTSGYMAWTPVSEESVRGHFKGYKIQTWTENEGEEGLREIHV-KG 873

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
            ++    V +F P SKNFAR+LA+NG +NGPPS +I F TPEGVP  VQ L+A PLGSSAF
Sbjct: 874  DTHNALVTQFKPDSKNFARILAYNGRFNGPPSAVIDFDTPEGVPSPVQGLDAYPLGSSAF 933

Query: 521  YLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRI 580
             L+W KP  PNG L GYKI Y+ VK + VG   E  P+I+DP  T  K+AGL+P++KYRI
Sbjct: 934  MLQWKKPLYPNGKLTGYKIYYEEVKESYVGERREYDPHITDPRVTRMKMAGLKPNSKYRI 993

Query: 581  HLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
             +   TK G+G+E  Y+     K+  NV      P     SW  +P     A   K+RI 
Sbjct: 994  SITATTKMGEGSE-HYIEKTTLKDAVNV-----APATPSFSWEQLPSDNGLA---KFRIN 1044

Query: 641  WRRHNTG 647
            W+    G
Sbjct: 1045 WQPSTEG 1051



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 164/596 (27%), Positives = 259/596 (43%), Gaps = 67/596 (11%)

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV 206
           C   G P P+  W  +G+ I  +    +   G + + I      D G Y C+ +N +G  
Sbjct: 268 CIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKS-LVIRQTNFDDAGTYTCDVSNGVGNA 326

Query: 207 YKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG---- 262
                +  +   P  T+ P+     + + VV  CR  G P+P+++WIHN K +       
Sbjct: 327 QSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNP 386

Query: 263 RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK-EHTHITDQPEDYEVEA 321
           R T+ +   ++I ++   D+G Y C A N LG       L V+ E   I + P       
Sbjct: 387 RRTVTDN-TIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTIAEAPAAVSTVD 445

Query: 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF-VQSNDYSLTVTKSSELDSGQYT 380
           G++ T +C     P  K  + WLR S   ++ +  R+ VQ+N   L +   +  D+G+YT
Sbjct: 446 GRNVTIKCRVNGSP--KPLVKWLRSS---NWLTGGRYNVQANG-DLEIQDVTFSDAGKYT 499

Query: 381 CRAQTELDFIEAQATLTVQVPL---EAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRG 437
           C AQ +   I+A  +L V+      + P N+   +V   + A    N     +L      
Sbjct: 500 CYAQNKFGEIQADGSLVVKEHTRITQEPQNY---EVAAGQSATFRCNEAHDDTLE----- 551

Query: 438 YKVQTWTEKDGEGSIRELIVNKGESTTTEVD-KFVPASKN---FARVLAFN-GAYNGPPS 492
            ++  W +              G+S   E   +FV A+ N    A+ +  + G Y     
Sbjct: 552 IEIDWWKD--------------GQSIDFETQPRFVKANDNSLTIAKTMELDSGEYTCVAR 597

Query: 493 EIISFVTP------EGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKG 546
             +   T       + VP   + L  I   +    + W +       ++ Y I++     
Sbjct: 598 TRLDEATARANLIVQDVPNAPK-LTGITCQADKAEIHWEQQGDNRSPILHYTIQFN---- 652

Query: 547 TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY------V 600
           T   P      Y   P T S+ +  + P   Y   +  + K G    S +         V
Sbjct: 653 TSFTPASWDAAYEKVPNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDV 712

Query: 601 PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ 660
           PFKNPDNV G+G+ PNNLVISWT MPEIEHNAP+F Y + W+R     AW  +++ DWRQ
Sbjct: 713 PFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQ 772

Query: 661 SELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 716
           + +V+A+QPTF  Y IKVV      +   +  E++   GE      D+ + A  NF
Sbjct: 773 NNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGE------DRPLDAPTNF 822



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 170/423 (40%), Gaps = 58/423 (13%)

Query: 43  EVALRNKKVE----LFCIFGGTPLPQTIWSKDGVPIN---PSDRISQGNYGKSLIIKHVE 95
           +VA +NK+ +    + C   G P P+  W K+G   +     +R+ +     +L+I   +
Sbjct: 43  KVAQQNKESDNPFIIECEADGQPEPEYSWIKNGKKFDWQAYDNRMLRQPGRGTLVITIPK 102

Query: 96  FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECKA-SGLP 153
             D+G Y C  SN  G A S S+ +       F  E  + + A E E    +C A  G P
Sbjct: 103 DEDRGHYQCFASNEFGTATSNSVYVRKAELNAFKDEAAKTLEAVEGEPFMLKCAAPDGFP 162

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--------NLRKSDTGN---YGCNATNS 202
            P ++W+     I ++     + +  +R+T++        N+ + D  +   Y C+AT+ 
Sbjct: 163 SPTVNWM-----IQESIDGSIKSINNSRMTLDPEGNLWFSNVTREDASSDFYYACSATSV 217

Query: 203 LGYVYK---DVYVNVL---AHAPEITEAPKDEY-------TVDGKTVVLTCRVFGAPKPE 249
               YK    V ++V      A +    P  +Y        + GK + L C   G P P+
Sbjct: 218 FRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQ 277

Query: 250 VNW------IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG-SGSL 302
             W      I     +T G Y       L I    F D+G YTC   N +G AQ  S  L
Sbjct: 278 TVWSKDGQRIQWSDRITQGHY----GKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIIL 333

Query: 303 TVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
            V    + T +PE       +   F C A   P  K+S  W+   +PI+  +        
Sbjct: 334 NVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKIS--WIHNGKPIEQSTPNPRRTVT 391

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP----LEAPSNFTLIQVIDAKK 418
           D ++ +    + D+G Y C A   L ++     L VQ       EAP+    +  +D + 
Sbjct: 392 DNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTIAEAPA---AVSTVDGRN 448

Query: 419 AVV 421
             +
Sbjct: 449 VTI 451



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/71 (54%), Positives = 51/71 (71%), Gaps = 4/71 (5%)

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
           F+ Y+I   QTWTE +GE  +RE+ V KG++    V +F P SKNFAR+LA+NG +NGPP
Sbjct: 849 FKGYKI---QTWTENEGEEGLREIHV-KGDTHNALVTQFKPDSKNFARILAYNGRFNGPP 904

Query: 731 SEIISFVTPEG 741
           S +I F TPEG
Sbjct: 905 SAVIDFDTPEG 915


>gi|17530861|ref|NP_511090.1| neuroglian, isoform A [Drosophila melanogaster]
 gi|45554534|ref|NP_996380.1| neuroglian, isoform C [Drosophila melanogaster]
 gi|281360613|ref|NP_001162704.1| neuroglian, isoform D [Drosophila melanogaster]
 gi|281360617|ref|NP_001162706.1| neuroglian, isoform F [Drosophila melanogaster]
 gi|442615512|ref|NP_001259336.1| neuroglian, isoform H [Drosophila melanogaster]
 gi|6760659|gb|AAA28728.2| neuroglian precursor [Drosophila melanogaster]
 gi|7290947|gb|AAF46387.1| neuroglian, isoform A [Drosophila melanogaster]
 gi|16182525|gb|AAL13513.1| GH03573p [Drosophila melanogaster]
 gi|45446861|gb|AAS65287.1| neuroglian, isoform C [Drosophila melanogaster]
 gi|272506036|gb|ACZ95239.1| neuroglian, isoform D [Drosophila melanogaster]
 gi|272506038|gb|ACZ95241.1| neuroglian, isoform F [Drosophila melanogaster]
 gi|440216537|gb|AGB95180.1| neuroglian, isoform H [Drosophila melanogaster]
          Length = 1239

 Score =  523 bits (1347), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 266/490 (54%), Positives = 338/490 (68%), Gaps = 11/490 (2%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           RSEYKIGN++LL+V   G+SASQN+H P +QYV+R++ +ALR K++ELFCI+GGTPLPQT
Sbjct: 219 RSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQT 278

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +WSKDG  I  SDRI+QG+YGKSL+I+   F D G+YTC+VSNGVG A+S+SI L+V + 
Sbjct: 279 VWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIILNVNSV 338

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFT EPE   AAE+E V FEC+A+G+PEP+I W+HNGKPI Q+ PNPRR V  N I I 
Sbjct: 339 PYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNPRRTVTDNTIRII 398

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
           NL K DTGNYGCNATNSLGYVYKDVY+NV A  P I+EAP    TVDG+ V + CRV G+
Sbjct: 399 NLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVDGRNVTIKCRVNGS 458

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP V W+     LTGGRY +   GDL+I DV F+D+G+YTC+A+NK G  Q  GSL VK
Sbjct: 459 PKPLVKWLRASNWLTGGRYNVQANGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVK 518

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           EHT IT +P++YEV AGQSATFRCN   D +L++ I W +  + IDFE++PRFV++ND S
Sbjct: 519 EHTRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSIDFEAQPRFVKTNDNS 578

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           LT+ K+ ELDSG+YTC A+T LD   A+A L VQ    AP   T I    A KA + W  
Sbjct: 579 LTIAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAPK-LTGI-TCQADKAEIHWEQ 636

Query: 426 VSPQSLRGHFRGYKVQ---TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLA 482
                 R     Y +Q   ++T    + +  E + N   S   ++    P +    RV+A
Sbjct: 637 QGDN--RSPILHYTIQFNTSFTPASWDAAY-EKVPNTDSSFVVQMS---PWANYTFRVIA 690

Query: 483 FNGAYNGPPS 492
           FN     PPS
Sbjct: 691 FNKIGASPPS 700



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 118/241 (48%), Positives = 156/241 (64%), Gaps = 10/241 (4%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            PL+AP+NFT+ Q+  +    ++W PVS +S+RGHF+GYK+QTWTE +GE  +RE+ V KG
Sbjct: 815  PLDAPTNFTMRQITSSTSGYMAWTPVSEESVRGHFKGYKIQTWTENEGEEGLREIHV-KG 873

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
            ++    V +F P SKN+AR+LA+NG +NGPPS +I F TPEGVP  VQ L+A PLGSSAF
Sbjct: 874  DTHNALVTQFKPDSKNYARILAYNGRFNGPPSAVIDFDTPEGVPSPVQGLDAYPLGSSAF 933

Query: 521  YLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRI 580
             L W KP  PNG L GYKI Y+ VK + VG   E  P+I+DP  T  K+AGL+P++KYRI
Sbjct: 934  MLHWKKPLYPNGKLTGYKIYYEEVKESYVGERREYDPHITDPRVTRMKMAGLKPNSKYRI 993

Query: 581  HLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
             +   TK G+G+E  Y+     K+  NV      P     SW  +P     A   K+RI 
Sbjct: 994  SITATTKMGEGSE-HYIEKTTLKDAVNV-----APATPSFSWEQLPSDNGLA---KFRIN 1044

Query: 641  W 641
            W
Sbjct: 1045 W 1045



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 163/597 (27%), Positives = 257/597 (43%), Gaps = 69/597 (11%)

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV 206
           C   G P P+  W  +G+ I  +    +   G + + I      D G Y C+ +N +G  
Sbjct: 268 CIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKS-LVIRQTNFDDAGTYTCDVSNGVGNA 326

Query: 207 YKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG---- 262
                +  +   P  T+ P+     + + VV  CR  G P+P+++WIHN K +       
Sbjct: 327 QSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNP 386

Query: 263 RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK-EHTHITDQPEDYEVEA 321
           R T+ +   ++I ++   D+G Y C A N LG       L V+ E   I++ P       
Sbjct: 387 RRTVTDN-TIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVD 445

Query: 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF-VQSNDYSLTVTKSSELDSGQYT 380
           G++ T +C     P  K  + WLR S   ++ +  R+ VQ+N   L +   +  D+G+YT
Sbjct: 446 GRNVTIKCRVNGSP--KPLVKWLRAS---NWLTGGRYNVQANG-DLEIQDVTFSDAGKYT 499

Query: 381 CRAQTELDFIEAQATLTVQVPL---EAPSNFTLIQVIDAKKAVVSWNPVSPQSLR----- 432
           C AQ +   I+A  +L V+      + P N+   +V   + A    N     +L      
Sbjct: 500 CYAQNKFGEIQADGSLVVKEHTRITQEPQNY---EVAAGQSATFRCNEAHDDTLEIEIDW 556

Query: 433 ---GHFRGYKVQTWTEKDGEGSI---RELIVNKGESTTTEVDKFVPASKNFARV-LAFNG 485
              G    ++ Q    K  + S+   + + ++ GE T     +   A+   AR  L    
Sbjct: 557 WKDGQSIDFEAQPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEAT---ARANLIVQD 613

Query: 486 AYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVK 545
             N P                   L  I   +    + W +       ++ Y I++    
Sbjct: 614 VPNAP------------------KLTGITCQADKAEIHWEQQGDNRSPILHYTIQFN--- 652

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY------ 599
            T   P      Y   P T S+ +  + P   Y   +  + K G    S +         
Sbjct: 653 -TSFTPASWDAAYEKVPNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPD 711

Query: 600 VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
           VPFKNPDNV G+G+ PNNLVISWT MPEIEHNAP+F Y + W+R     AW  +++ DWR
Sbjct: 712 VPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWR 771

Query: 660 QSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 716
           Q+ +V+A+QPTF  Y IKVV      +   +  E++   GE      D+ + A  NF
Sbjct: 772 QNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGE------DRPLDAPTNF 822



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 170/423 (40%), Gaps = 58/423 (13%)

Query: 43  EVALRNKKVE----LFCIFGGTPLPQTIWSKDGVPIN---PSDRISQGNYGKSLIIKHVE 95
           +VA +NK+ +    + C   G P P+  W K+G   +     +R+ +     +L+I   +
Sbjct: 43  KVAQQNKESDNPFIIECEADGQPEPEYSWIKNGKKFDWQAYDNRMLRQPGRGTLVITIPK 102

Query: 96  FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECKA-SGLP 153
             D+G Y C  SN  G A S S+ +       F  E  + + A E E    +C A  G P
Sbjct: 103 DEDRGHYQCFASNEFGTATSNSVYVRKAELNAFKDEAAKTLEAVEGEPFMLKCAAPDGFP 162

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--------NLRKSDTGN---YGCNATNS 202
            P ++W+     I ++     + +  +R+T++        N+ + D  +   Y C+AT+ 
Sbjct: 163 SPTVNWM-----IQESIDGSIKSINNSRMTLDPEGNLWFSNVTREDASSDFYYACSATSV 217

Query: 203 LGYVYK---DVYVNVL---AHAPEITEAPKDEY-------TVDGKTVVLTCRVFGAPKPE 249
               YK    V ++V      A +    P  +Y        + GK + L C   G P P+
Sbjct: 218 FRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQ 277

Query: 250 VNW------IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG-SGSL 302
             W      I     +T G Y       L I    F D+G YTC   N +G AQ  S  L
Sbjct: 278 TVWSKDGQRIQWSDRITQGHY----GKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIIL 333

Query: 303 TVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
            V    + T +PE       +   F C A   P  K+S  W+   +PI+  +        
Sbjct: 334 NVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKIS--WIHNGKPIEQSTPNPRRTVT 391

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP----LEAPSNFTLIQVIDAKK 418
           D ++ +    + D+G Y C A   L ++     L VQ       EAP+    +  +D + 
Sbjct: 392 DNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPA---AVSTVDGRN 448

Query: 419 AVV 421
             +
Sbjct: 449 VTI 451



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/71 (53%), Positives = 51/71 (71%), Gaps = 4/71 (5%)

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
           F+ Y+I   QTWTE +GE  +RE+ V KG++    V +F P SKN+AR+LA+NG +NGPP
Sbjct: 849 FKGYKI---QTWTENEGEEGLREIHV-KGDTHNALVTQFKPDSKNYARILAYNGRFNGPP 904

Query: 731 SEIISFVTPEG 741
           S +I F TPEG
Sbjct: 905 SAVIDFDTPEG 915


>gi|6760653|gb|AAC28613.2| neuroglian [Drosophila melanogaster]
          Length = 1239

 Score =  523 bits (1347), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 266/490 (54%), Positives = 338/490 (68%), Gaps = 11/490 (2%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           RSEYKIGN++LL+V   G+SASQN+H P +QYV+R++ +ALR K++ELFCI+GGTPLPQT
Sbjct: 219 RSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQT 278

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +WSKDG  I  SDRI+QG+YGKSL+I+   F D G+YTC+VSNGVG A+S+SI L+V + 
Sbjct: 279 VWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIILNVNSV 338

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFT EPE   AAE+E V FEC+A+G+PEP+I W+HNGKPI Q+ PNPRR V  N I I 
Sbjct: 339 PYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNPRRTVTDNTIRII 398

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
           NL K DTGNYGCNATNSLGYVYKDVY+NV A  P I+EAP    TVDG+ V + CRV G+
Sbjct: 399 NLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVDGRNVTIKCRVNGS 458

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP V W+     LTGGRY +   GDL+I DV F+D+G+YTC+A+NK G  Q  GSL VK
Sbjct: 459 PKPLVKWLRASNWLTGGRYNVQANGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVK 518

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           EHT IT +P++YEV AGQSATFRCN   D +L++ I W +  + IDFE++PRFV++ND S
Sbjct: 519 EHTRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSIDFEAQPRFVKTNDNS 578

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           LT+ K+ ELDSG+YTC A+T LD   A+A L VQ    AP   T I    A KA + W  
Sbjct: 579 LTIAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAPK-LTGI-TCQADKAEIHWEQ 636

Query: 426 VSPQSLRGHFRGYKVQ---TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLA 482
                 R     Y +Q   ++T    + +  E + N   S   ++    P +    RV+A
Sbjct: 637 QGDN--RSPILHYTIQFNTSFTPASWDAAY-EKVPNTDSSFVVQMS---PWANYTFRVIA 690

Query: 483 FNGAYNGPPS 492
           FN     PPS
Sbjct: 691 FNKIGASPPS 700



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 118/241 (48%), Positives = 156/241 (64%), Gaps = 10/241 (4%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            PL+AP+NFT+ Q+  +    ++W PVS +S+RGHF+GYK+QTWTE +GE  +RE+ V KG
Sbjct: 815  PLDAPTNFTMRQITSSTSGYMAWTPVSEESVRGHFKGYKIQTWTENEGEEGLREIHV-KG 873

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
            ++    V +F P SKN+AR+LA+NG +NGPPS +I F TPEGVP  VQ L+A PLGSSAF
Sbjct: 874  DTHNALVTQFKPDSKNYARILAYNGRFNGPPSAVIDFDTPEGVPSPVQGLDAYPLGSSAF 933

Query: 521  YLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRI 580
             L W KP  PNG L GYKI Y+ VK + VG   E  P+I+DP  T  K+AGL+P++KYRI
Sbjct: 934  MLHWKKPLYPNGKLTGYKIYYEEVKESYVGERREYDPHITDPRVTRMKMAGLKPNSKYRI 993

Query: 581  HLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
             +   TK G+G+E  Y+     K+  NV      P     SW  +P     A   K+RI 
Sbjct: 994  SITATTKMGEGSE-HYIEKTTLKDAVNV-----APATPSFSWEQLPSDNGLA---KFRIN 1044

Query: 641  W 641
            W
Sbjct: 1045 W 1045



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 163/597 (27%), Positives = 257/597 (43%), Gaps = 69/597 (11%)

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV 206
           C   G P P+  W  +G+ I  +    +   G + + I      D G Y C+ +N +G  
Sbjct: 268 CIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKS-LVIRQTNFDDAGTYTCDVSNGVGNA 326

Query: 207 YKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG---- 262
                +  +   P  T+ P+     + + VV  CR  G P+P+++WIHN K +       
Sbjct: 327 QSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNP 386

Query: 263 RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK-EHTHITDQPEDYEVEA 321
           R T+ +   ++I ++   D+G Y C A N LG       L V+ E   I++ P       
Sbjct: 387 RRTVTDN-TIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVD 445

Query: 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF-VQSNDYSLTVTKSSELDSGQYT 380
           G++ T +C     P  K  + WLR S   ++ +  R+ VQ+N   L +   +  D+G+YT
Sbjct: 446 GRNVTIKCRVNGSP--KPLVKWLRAS---NWLTGGRYNVQANG-DLEIQDVTFSDAGKYT 499

Query: 381 CRAQTELDFIEAQATLTVQVPL---EAPSNFTLIQVIDAKKAVVSWNPVSPQSLR----- 432
           C AQ +   I+A  +L V+      + P N+   +V   + A    N     +L      
Sbjct: 500 CYAQNKFGEIQADGSLVVKEHTRITQEPQNY---EVAAGQSATFRCNEAHDDTLEIEIDW 556

Query: 433 ---GHFRGYKVQTWTEKDGEGSI---RELIVNKGESTTTEVDKFVPASKNFARV-LAFNG 485
              G    ++ Q    K  + S+   + + ++ GE T     +   A+   AR  L    
Sbjct: 557 WKDGQSIDFEAQPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEAT---ARANLIVQD 613

Query: 486 AYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVK 545
             N P                   L  I   +    + W +       ++ Y I++    
Sbjct: 614 VPNAP------------------KLTGITCQADKAEIHWEQQGDNRSPILHYTIQFN--- 652

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY------ 599
            T   P      Y   P T S+ +  + P   Y   +  + K G    S +         
Sbjct: 653 -TSFTPASWDAAYEKVPNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPD 711

Query: 600 VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
           VPFKNPDNV G+G+ PNNLVISWT MPEIEHNAP+F Y + W+R     AW  +++ DWR
Sbjct: 712 VPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWR 771

Query: 660 QSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 716
           Q+ +V+A+QPTF  Y IKVV      +   +  E++   GE      D+ + A  NF
Sbjct: 772 QNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGE------DRPLDAPTNF 822



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 105/423 (24%), Positives = 170/423 (40%), Gaps = 58/423 (13%)

Query: 43  EVALRNKKVE----LFCIFGGTPLPQTIWSKDGVPIN--PSDRISQGNYGK-SLIIKHVE 95
           +VA +NK+ +    + C   G P P+  W K+G   +    D+      G+ +L+I   +
Sbjct: 43  KVAQQNKESDNPFIIECEADGQPEPEYSWIKNGKKFDWQAYDKPMLRQPGRGTLVITIPK 102

Query: 96  FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECKA-SGLP 153
             D+G Y C  SN  G A S S+ +       F  E  + + A E E    +C A  G P
Sbjct: 103 DEDRGHYQCFASNEFGTATSNSVYVRKAELNAFKDEAAKTLEAVEGEPFMLKCAAPDGFP 162

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--------NLRKSDTGN---YGCNATNS 202
            P ++W+     I ++     + +  +R+T++        N+ + D  +   Y C+AT+ 
Sbjct: 163 SPTVNWM-----IQESIDGSIKSINNSRMTLDPEGNLWFSNVTREDASSDFYYACSATSV 217

Query: 203 LGYVYK---DVYVNVL---AHAPEITEAPKDEY-------TVDGKTVVLTCRVFGAPKPE 249
               YK    V ++V      A +    P  +Y        + GK + L C   G P P+
Sbjct: 218 FRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQ 277

Query: 250 VNW------IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG-SGSL 302
             W      I     +T G Y       L I    F D+G YTC   N +G AQ  S  L
Sbjct: 278 TVWSKDGQRIQWSDRITQGHY----GKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIIL 333

Query: 303 TVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
            V    + T +PE       +   F C A   P  K+S  W+   +PI+  +        
Sbjct: 334 NVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKIS--WIHNGKPIEQSTPNPRRTVT 391

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP----LEAPSNFTLIQVIDAKK 418
           D ++ +    + D+G Y C A   L ++     L VQ       EAP+    +  +D + 
Sbjct: 392 DNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPA---AVSTVDGRN 448

Query: 419 AVV 421
             +
Sbjct: 449 VTI 451



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/71 (53%), Positives = 51/71 (71%), Gaps = 4/71 (5%)

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
           F+ Y+I   QTWTE +GE  +RE+ V KG++    V +F P SKN+AR+LA+NG +NGPP
Sbjct: 849 FKGYKI---QTWTENEGEEGLREIHV-KGDTHNALVTQFKPDSKNYARILAYNGRFNGPP 904

Query: 731 SEIISFVTPEG 741
           S +I F TPEG
Sbjct: 905 SAVIDFDTPEG 915


>gi|195355114|ref|XP_002044038.1| GM21680 [Drosophila sechellia]
 gi|194129291|gb|EDW51334.1| GM21680 [Drosophila sechellia]
          Length = 1305

 Score =  523 bits (1347), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 266/490 (54%), Positives = 338/490 (68%), Gaps = 11/490 (2%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           RSEYKIGN++LL+V   G+SASQN+H P +QYV+R++ +ALR K++ELFCI+GGTPLPQT
Sbjct: 219 RSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQT 278

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +WSKDG  I  SDRI+QG+YGKSL+I+   F D G+YTC+VSNGVG A+S+SI L+V + 
Sbjct: 279 VWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIILNVNSV 338

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFT EPE   AAE+E V FEC+A+G+PEP+I W+HNGKPI Q+ PNPRR V  N I I 
Sbjct: 339 PYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNPRRTVTDNTIRII 398

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
           NL K DTGNYGCNATNSLGYVYKDVY+NV A  P I+EAP    TVDG+ V + CRV G+
Sbjct: 399 NLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVDGRNVTIKCRVNGS 458

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP V W+     LTGGRY +   GDL+I DV F+D+G+YTC+A+NK G  Q  GSL VK
Sbjct: 459 PKPLVKWLRASNWLTGGRYNVQANGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVK 518

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           EHT IT +P++YEV AGQSATFRCN   D +L++ I W +  + IDFE++PRFV++ND S
Sbjct: 519 EHTRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSIDFEAQPRFVKTNDNS 578

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           LT+ K+ ELDSG+YTC A+T LD   A+A L VQ    AP   T I    A KA + W  
Sbjct: 579 LTIAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAPK-LTGI-TCQADKAEIHWEQ 636

Query: 426 VSPQSLRGHFRGYKVQ---TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLA 482
                 R     Y +Q   ++T    + +  E + N   S   ++    P +    RV+A
Sbjct: 637 QGDN--RSPILHYTIQFNTSFTPASWDAAY-EKVPNTDSSFVVQMS---PWANYTFRVIA 690

Query: 483 FNGAYNGPPS 492
           FN     PPS
Sbjct: 691 FNKIGASPPS 700



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 115/226 (50%), Positives = 155/226 (68%), Gaps = 7/226 (3%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            PL+AP+NFT+ Q+  +    ++W PVS +S+RGHF+GYK+QTWTE +GE  +RE+ V KG
Sbjct: 815  PLDAPTNFTMRQITSSTSGYMAWTPVSEESVRGHFKGYKIQTWTENEGEEGLREIHV-KG 873

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
            ++    V +F P SKN+AR+LA+NG +NGPPS +I F TPEGVP  VQ L+A PLGSSAF
Sbjct: 874  DTHNALVTQFKPDSKNYARILAYNGRFNGPPSAVIDFDTPEGVPSPVQGLDAYPLGSSAF 933

Query: 521  YLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRI 580
             L W KP  PNG L GYKI Y+ VK + VG   E  P+I+DP  T  K+AGL+P++KYRI
Sbjct: 934  MLHWKKPLYPNGKLTGYKIYYEEVKESYVGERREYDPHITDPRVTRMKMAGLKPNSKYRI 993

Query: 581  HLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
             +   TK G+G+E  Y+  +P K  D V+   +TP+    SW  +P
Sbjct: 994  SITATTKMGEGSE-HYIEMIPLK--DAVKCGPATPS---FSWEQLP 1033



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 163/597 (27%), Positives = 257/597 (43%), Gaps = 69/597 (11%)

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV 206
           C   G P P+  W  +G+ I  +    +   G + + I      D G Y C+ +N +G  
Sbjct: 268 CIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKS-LVIRQTNFDDAGTYTCDVSNGVGNA 326

Query: 207 YKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG---- 262
                +  +   P  T+ P+     + + VV  CR  G P+P+++WIHN K +       
Sbjct: 327 QSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNP 386

Query: 263 RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK-EHTHITDQPEDYEVEA 321
           R T+ +   ++I ++   D+G Y C A N LG       L V+ E   I++ P       
Sbjct: 387 RRTVTDN-TIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVD 445

Query: 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF-VQSNDYSLTVTKSSELDSGQYT 380
           G++ T +C     P  K  + WLR S   ++ +  R+ VQ+N   L +   +  D+G+YT
Sbjct: 446 GRNVTIKCRVNGSP--KPLVKWLRAS---NWLTGGRYNVQANG-DLEIQDVTFSDAGKYT 499

Query: 381 CRAQTELDFIEAQATLTVQVPL---EAPSNFTLIQVIDAKKAVVSWNPVSPQSLR----- 432
           C AQ +   I+A  +L V+      + P N+   +V   + A    N     +L      
Sbjct: 500 CYAQNKFGEIQADGSLVVKEHTRITQEPQNY---EVAAGQSATFRCNEAHDDTLEIEIDW 556

Query: 433 ---GHFRGYKVQTWTEKDGEGSI---RELIVNKGESTTTEVDKFVPASKNFARV-LAFNG 485
              G    ++ Q    K  + S+   + + ++ GE T     +   A+   AR  L    
Sbjct: 557 WKDGQSIDFEAQPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEAT---ARANLIVQD 613

Query: 486 AYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVK 545
             N P                   L  I   +    + W +       ++ Y I++    
Sbjct: 614 VPNAP------------------KLTGITCQADKAEIHWEQQGDNRSPILHYTIQFN--- 652

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY------ 599
            T   P      Y   P T S+ +  + P   Y   +  + K G    S +         
Sbjct: 653 -TSFTPASWDAAYEKVPNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPD 711

Query: 600 VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
           VPFKNPDNV G+G+ PNNLVISWT MPEIEHNAP+F Y + W+R     AW  +++ DWR
Sbjct: 712 VPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWR 771

Query: 660 QSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 716
           Q+ +V+A+QPTF  Y IKVV      +   +  E++   GE      D+ + A  NF
Sbjct: 772 QNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGE------DRPLDAPTNF 822



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 170/423 (40%), Gaps = 58/423 (13%)

Query: 43  EVALRNKKVE----LFCIFGGTPLPQTIWSKDGVPIN---PSDRISQGNYGKSLIIKHVE 95
           +VA +NK+ +    + C   G P P+  W K+G   +     +R+ +     +L+I   +
Sbjct: 43  KVAQQNKESDNPFIIECEADGQPEPEYSWIKNGKKFDWQAYDNRMLRQPGRGTLVITIPK 102

Query: 96  FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECKA-SGLP 153
             D+G Y C  SN  G A S S+ +       F  E  + + A E E    +C A  G P
Sbjct: 103 DEDRGHYQCFASNEFGTATSNSVYVRKAELNAFKDEAAKTLEAVEGEPFMLKCAAPDGFP 162

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--------NLRKSDTGN---YGCNATNS 202
            P ++W+     I ++     + +  +R+T++        N+ + D  +   Y C+AT+ 
Sbjct: 163 SPTVNWM-----IQESIDGSIKSINNSRMTLDPEGNLWFSNVTREDASSDFYYACSATSV 217

Query: 203 LGYVYK---DVYVNVL---AHAPEITEAPKDEY-------TVDGKTVVLTCRVFGAPKPE 249
               YK    V ++V      A +    P  +Y        + GK + L C   G P P+
Sbjct: 218 FRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQ 277

Query: 250 VNW------IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG-SGSL 302
             W      I     +T G Y       L I    F D+G YTC   N +G AQ  S  L
Sbjct: 278 TVWSKDGQRIQWSDRITQGHY----GKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIIL 333

Query: 303 TVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
            V    + T +PE       +   F C A   P  K+S  W+   +PI+  +        
Sbjct: 334 NVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKIS--WIHNGKPIEQSTPNPRRTVT 391

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP----LEAPSNFTLIQVIDAKK 418
           D ++ +    + D+G Y C A   L ++     L VQ       EAP+    +  +D + 
Sbjct: 392 DNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPA---AVSTVDGRN 448

Query: 419 AVV 421
             +
Sbjct: 449 VTI 451



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/71 (53%), Positives = 51/71 (71%), Gaps = 4/71 (5%)

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
           F+ Y+I   QTWTE +GE  +RE+ V KG++    V +F P SKN+AR+LA+NG +NGPP
Sbjct: 849 FKGYKI---QTWTENEGEEGLREIHV-KGDTHNALVTQFKPDSKNYARILAYNGRFNGPP 904

Query: 731 SEIISFVTPEG 741
           S +I F TPEG
Sbjct: 905 SAVIDFDTPEG 915


>gi|6760654|gb|AAC28614.2| neuroglian [Drosophila melanogaster]
          Length = 1302

 Score =  523 bits (1347), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 266/490 (54%), Positives = 338/490 (68%), Gaps = 11/490 (2%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           RSEYKIGN++LL+V   G+SASQN+H P +QYV+R++ +ALR K++ELFCI+GGTPLPQT
Sbjct: 219 RSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQT 278

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +WSKDG  I  SDRI+QG+YGKSL+I+   F D G+YTC+VSNGVG A+S+SI L+V + 
Sbjct: 279 VWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIILNVNSV 338

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFT EPE   AAE+E V FEC+A+G+PEP+I W+HNGKPI Q+ PNPRR V  N I I 
Sbjct: 339 PYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNPRRTVTDNTIRII 398

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
           NL K DTGNYGCNATNSLGYVYKDVY+NV A  P I+EAP    TVDG+ V + CRV G+
Sbjct: 399 NLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVDGRNVTIKCRVNGS 458

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP V W+     LTGGRY +   GDL+I DV F+D+G+YTC+A+NK G  Q  GSL VK
Sbjct: 459 PKPLVKWLRASNWLTGGRYNVQANGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVK 518

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           EHT IT +P++YEV AGQSATFRCN   D +L++ I W +  + IDFE++PRFV++ND S
Sbjct: 519 EHTRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSIDFEAQPRFVKTNDNS 578

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           LT+ K+ ELDSG+YTC A+T LD   A+A L VQ    AP   T I    A KA + W  
Sbjct: 579 LTIAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAPK-LTGI-TCQADKAEIHWEQ 636

Query: 426 VSPQSLRGHFRGYKVQ---TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLA 482
                 R     Y +Q   ++T    + +  E + N   S   ++    P +    RV+A
Sbjct: 637 QGDN--RSPILHYTIQFNTSFTPASWDAAY-EKVPNTDSSFVVQMS---PWANYTFRVIA 690

Query: 483 FNGAYNGPPS 492
           FN     PPS
Sbjct: 691 FNKIGASPPS 700



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 118/241 (48%), Positives = 156/241 (64%), Gaps = 10/241 (4%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            PL+AP+NFT+ Q+  +    ++W PVS +S+RGHF+GYK+QTWTE +GE  +RE+ V KG
Sbjct: 815  PLDAPTNFTMRQITSSTSGYMAWTPVSEESVRGHFKGYKIQTWTENEGEEGLREIHV-KG 873

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
            ++    V +F P SKN+AR+LA+NG +NGPPS +I F TPEGVP  VQ L+A PLGSSAF
Sbjct: 874  DTHNALVTQFKPDSKNYARILAYNGRFNGPPSAVIDFDTPEGVPSPVQGLDAYPLGSSAF 933

Query: 521  YLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRI 580
             L W KP  PNG L GYKI Y+ VK + VG   E  P+I+DP  T  K+AGL+P++KYRI
Sbjct: 934  MLHWKKPLYPNGKLTGYKIYYEEVKESYVGERREYDPHITDPRVTRMKMAGLKPNSKYRI 993

Query: 581  HLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
             +   TK G+G+E  Y+     K+  NV      P     SW  +P     A   K+RI 
Sbjct: 994  SITATTKMGEGSE-HYIEKTTLKDAVNV-----APATPSFSWEQLPSDNGLA---KFRIN 1044

Query: 641  W 641
            W
Sbjct: 1045 W 1045



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 163/597 (27%), Positives = 257/597 (43%), Gaps = 69/597 (11%)

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV 206
           C   G P P+  W  +G+ I  +    +   G + + I      D G Y C+ +N +G  
Sbjct: 268 CIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKS-LVIRQTNFDDAGTYTCDVSNGVGNA 326

Query: 207 YKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG---- 262
                +  +   P  T+ P+     + + VV  CR  G P+P+++WIHN K +       
Sbjct: 327 QSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNP 386

Query: 263 RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK-EHTHITDQPEDYEVEA 321
           R T+ +   ++I ++   D+G Y C A N LG       L V+ E   I++ P       
Sbjct: 387 RRTVTDN-TIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVD 445

Query: 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF-VQSNDYSLTVTKSSELDSGQYT 380
           G++ T +C     P  K  + WLR S   ++ +  R+ VQ+N   L +   +  D+G+YT
Sbjct: 446 GRNVTIKCRVNGSP--KPLVKWLRAS---NWLTGGRYNVQANG-DLEIQDVTFSDAGKYT 499

Query: 381 CRAQTELDFIEAQATLTVQVPL---EAPSNFTLIQVIDAKKAVVSWNPVSPQSLR----- 432
           C AQ +   I+A  +L V+      + P N+   +V   + A    N     +L      
Sbjct: 500 CYAQNKFGEIQADGSLVVKEHTRITQEPQNY---EVAAGQSATFRCNEAHDDTLEIEIDW 556

Query: 433 ---GHFRGYKVQTWTEKDGEGSI---RELIVNKGESTTTEVDKFVPASKNFARV-LAFNG 485
              G    ++ Q    K  + S+   + + ++ GE T     +   A+   AR  L    
Sbjct: 557 WKDGQSIDFEAQPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEAT---ARANLIVQD 613

Query: 486 AYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVK 545
             N P                   L  I   +    + W +       ++ Y I++    
Sbjct: 614 VPNAP------------------KLTGITCQADKAEIHWEQQGDNRSPILHYTIQFN--- 652

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY------ 599
            T   P      Y   P T S+ +  + P   Y   +  + K G    S +         
Sbjct: 653 -TSFTPASWDAAYEKVPNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPD 711

Query: 600 VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
           VPFKNPDNV G+G+ PNNLVISWT MPEIEHNAP+F Y + W+R     AW  +++ DWR
Sbjct: 712 VPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWR 771

Query: 660 QSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 716
           Q+ +V+A+QPTF  Y IKVV      +   +  E++   GE      D+ + A  NF
Sbjct: 772 QNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGE------DRPLDAPTNF 822



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 105/423 (24%), Positives = 170/423 (40%), Gaps = 58/423 (13%)

Query: 43  EVALRNKKVE----LFCIFGGTPLPQTIWSKDGVPIN--PSDRISQGNYGK-SLIIKHVE 95
           +VA +NK+ +    + C   G P P+  W K+G   +    D+      G+ +L+I   +
Sbjct: 43  KVAQQNKESDNPFIIECEADGQPEPEYSWIKNGKKFDWQAYDKPMLRQPGRGTLVITIPK 102

Query: 96  FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECKA-SGLP 153
             D+G Y C  SN  G A S S+ +       F  E  + + A E E    +C A  G P
Sbjct: 103 DEDRGHYQCFASNEFGTATSNSVYVRKAELNAFKDEAAKTLEAVEGEPFMLKCAAPDGFP 162

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--------NLRKSDTGN---YGCNATNS 202
            P ++W+     I ++     + +  +R+T++        N+ + D  +   Y C+AT+ 
Sbjct: 163 SPTVNWM-----IQESIDGSIKSINNSRMTLDPEGNLWFSNVTREDASSDFYYACSATSV 217

Query: 203 LGYVYK---DVYVNVL---AHAPEITEAPKDEY-------TVDGKTVVLTCRVFGAPKPE 249
               YK    V ++V      A +    P  +Y        + GK + L C   G P P+
Sbjct: 218 FRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQ 277

Query: 250 VNW------IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG-SGSL 302
             W      I     +T G Y       L I    F D+G YTC   N +G AQ  S  L
Sbjct: 278 TVWSKDGQRIQWSDRITQGHY----GKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIIL 333

Query: 303 TVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
            V    + T +PE       +   F C A   P  K+S  W+   +PI+  +        
Sbjct: 334 NVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKIS--WIHNGKPIEQSTPNPRRTVT 391

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP----LEAPSNFTLIQVIDAKK 418
           D ++ +    + D+G Y C A   L ++     L VQ       EAP+    +  +D + 
Sbjct: 392 DNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPA---AVSTVDGRN 448

Query: 419 AVV 421
             +
Sbjct: 449 VTI 451



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 38/71 (53%), Positives = 51/71 (71%), Gaps = 4/71 (5%)

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
           F+ Y+I   QTWTE +GE  +RE+ V KG++    V +F P SKN+AR+LA+NG +NGPP
Sbjct: 849 FKGYKI---QTWTENEGEEGLREIHV-KGDTHNALVTQFKPDSKNYARILAYNGRFNGPP 904

Query: 731 SEIISFVTPEG 741
           S +I F TPEG
Sbjct: 905 SAVIDFDTPEG 915


>gi|24640619|ref|NP_727274.1| neuroglian, isoform B [Drosophila melanogaster]
 gi|281360615|ref|NP_001162705.1| neuroglian, isoform E [Drosophila melanogaster]
 gi|442615514|ref|NP_001259337.1| neuroglian, isoform I [Drosophila melanogaster]
 gi|14286138|sp|P20241.2|NRG_DROME RecName: Full=Neuroglian; Flags: Precursor
 gi|22831957|gb|AAN09236.1| neuroglian, isoform B [Drosophila melanogaster]
 gi|272506037|gb|ACZ95240.1| neuroglian, isoform E [Drosophila melanogaster]
 gi|440216538|gb|AGB95181.1| neuroglian, isoform I [Drosophila melanogaster]
          Length = 1302

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 266/490 (54%), Positives = 338/490 (68%), Gaps = 11/490 (2%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           RSEYKIGN++LL+V   G+SASQN+H P +QYV+R++ +ALR K++ELFCI+GGTPLPQT
Sbjct: 219 RSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQT 278

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +WSKDG  I  SDRI+QG+YGKSL+I+   F D G+YTC+VSNGVG A+S+SI L+V + 
Sbjct: 279 VWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIILNVNSV 338

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFT EPE   AAE+E V FEC+A+G+PEP+I W+HNGKPI Q+ PNPRR V  N I I 
Sbjct: 339 PYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNPRRTVTDNTIRII 398

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
           NL K DTGNYGCNATNSLGYVYKDVY+NV A  P I+EAP    TVDG+ V + CRV G+
Sbjct: 399 NLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVDGRNVTIKCRVNGS 458

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP V W+     LTGGRY +   GDL+I DV F+D+G+YTC+A+NK G  Q  GSL VK
Sbjct: 459 PKPLVKWLRASNWLTGGRYNVQANGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVK 518

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           EHT IT +P++YEV AGQSATFRCN   D +L++ I W +  + IDFE++PRFV++ND S
Sbjct: 519 EHTRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSIDFEAQPRFVKTNDNS 578

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           LT+ K+ ELDSG+YTC A+T LD   A+A L VQ    AP   T I    A KA + W  
Sbjct: 579 LTIAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAPK-LTGI-TCQADKAEIHWEQ 636

Query: 426 VSPQSLRGHFRGYKVQ---TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLA 482
                 R     Y +Q   ++T    + +  E + N   S   ++    P +    RV+A
Sbjct: 637 QGDN--RSPILHYTIQFNTSFTPASWDAAY-EKVPNTDSSFVVQMS---PWANYTFRVIA 690

Query: 483 FNGAYNGPPS 492
           FN     PPS
Sbjct: 691 FNKIGASPPS 700



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 118/241 (48%), Positives = 156/241 (64%), Gaps = 10/241 (4%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            PL+AP+NFT+ Q+  +    ++W PVS +S+RGHF+GYK+QTWTE +GE  +RE+ V KG
Sbjct: 815  PLDAPTNFTMRQITSSTSGYMAWTPVSEESVRGHFKGYKIQTWTENEGEEGLREIHV-KG 873

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
            ++    V +F P SKN+AR+LA+NG +NGPPS +I F TPEGVP  VQ L+A PLGSSAF
Sbjct: 874  DTHNALVTQFKPDSKNYARILAYNGRFNGPPSAVIDFDTPEGVPSPVQGLDAYPLGSSAF 933

Query: 521  YLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRI 580
             L W KP  PNG L GYKI Y+ VK + VG   E  P+I+DP  T  K+AGL+P++KYRI
Sbjct: 934  MLHWKKPLYPNGKLTGYKIYYEEVKESYVGERREYDPHITDPRVTRMKMAGLKPNSKYRI 993

Query: 581  HLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
             +   TK G+G+E  Y+     K+  NV      P     SW  +P     A   K+RI 
Sbjct: 994  SITATTKMGEGSE-HYIEKTTLKDAVNV-----APATPSFSWEQLPSDNGLA---KFRIN 1044

Query: 641  W 641
            W
Sbjct: 1045 W 1045



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 163/597 (27%), Positives = 257/597 (43%), Gaps = 69/597 (11%)

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV 206
           C   G P P+  W  +G+ I  +    +   G + + I      D G Y C+ +N +G  
Sbjct: 268 CIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKS-LVIRQTNFDDAGTYTCDVSNGVGNA 326

Query: 207 YKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG---- 262
                +  +   P  T+ P+     + + VV  CR  G P+P+++WIHN K +       
Sbjct: 327 QSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNP 386

Query: 263 RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK-EHTHITDQPEDYEVEA 321
           R T+ +   ++I ++   D+G Y C A N LG       L V+ E   I++ P       
Sbjct: 387 RRTVTDN-TIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVD 445

Query: 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF-VQSNDYSLTVTKSSELDSGQYT 380
           G++ T +C     P  K  + WLR S   ++ +  R+ VQ+N   L +   +  D+G+YT
Sbjct: 446 GRNVTIKCRVNGSP--KPLVKWLRAS---NWLTGGRYNVQANG-DLEIQDVTFSDAGKYT 499

Query: 381 CRAQTELDFIEAQATLTVQVPL---EAPSNFTLIQVIDAKKAVVSWNPVSPQSLR----- 432
           C AQ +   I+A  +L V+      + P N+   +V   + A    N     +L      
Sbjct: 500 CYAQNKFGEIQADGSLVVKEHTRITQEPQNY---EVAAGQSATFRCNEAHDDTLEIEIDW 556

Query: 433 ---GHFRGYKVQTWTEKDGEGSI---RELIVNKGESTTTEVDKFVPASKNFARV-LAFNG 485
              G    ++ Q    K  + S+   + + ++ GE T     +   A+   AR  L    
Sbjct: 557 WKDGQSIDFEAQPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEAT---ARANLIVQD 613

Query: 486 AYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVK 545
             N P                   L  I   +    + W +       ++ Y I++    
Sbjct: 614 VPNAP------------------KLTGITCQADKAEIHWEQQGDNRSPILHYTIQFN--- 652

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY------ 599
            T   P      Y   P T S+ +  + P   Y   +  + K G    S +         
Sbjct: 653 -TSFTPASWDAAYEKVPNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPD 711

Query: 600 VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
           VPFKNPDNV G+G+ PNNLVISWT MPEIEHNAP+F Y + W+R     AW  +++ DWR
Sbjct: 712 VPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWR 771

Query: 660 QSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 716
           Q+ +V+A+QPTF  Y IKVV      +   +  E++   GE      D+ + A  NF
Sbjct: 772 QNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGE------DRPLDAPTNF 822



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 170/423 (40%), Gaps = 58/423 (13%)

Query: 43  EVALRNKKVE----LFCIFGGTPLPQTIWSKDGVPIN---PSDRISQGNYGKSLIIKHVE 95
           +VA +NK+ +    + C   G P P+  W K+G   +     +R+ +     +L+I   +
Sbjct: 43  KVAQQNKESDNPFIIECEADGQPEPEYSWIKNGKKFDWQAYDNRMLRQPGRGTLVITIPK 102

Query: 96  FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECKA-SGLP 153
             D+G Y C  SN  G A S S+ +       F  E  + + A E E    +C A  G P
Sbjct: 103 DEDRGHYQCFASNEFGTATSNSVYVRKAELNAFKDEAAKTLEAVEGEPFMLKCAAPDGFP 162

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--------NLRKSDTGN---YGCNATNS 202
            P ++W+     I ++     + +  +R+T++        N+ + D  +   Y C+AT+ 
Sbjct: 163 SPTVNWM-----IQESIDGSIKSINNSRMTLDPEGNLWFSNVTREDASSDFYYACSATSV 217

Query: 203 LGYVYK---DVYVNVL---AHAPEITEAPKDEY-------TVDGKTVVLTCRVFGAPKPE 249
               YK    V ++V      A +    P  +Y        + GK + L C   G P P+
Sbjct: 218 FRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQ 277

Query: 250 VNW------IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG-SGSL 302
             W      I     +T G Y       L I    F D+G YTC   N +G AQ  S  L
Sbjct: 278 TVWSKDGQRIQWSDRITQGHY----GKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIIL 333

Query: 303 TVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
            V    + T +PE       +   F C A   P  K+S  W+   +PI+  +        
Sbjct: 334 NVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKIS--WIHNGKPIEQSTPNPRRTVT 391

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP----LEAPSNFTLIQVIDAKK 418
           D ++ +    + D+G Y C A   L ++     L VQ       EAP+    +  +D + 
Sbjct: 392 DNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPA---AVSTVDGRN 448

Query: 419 AVV 421
             +
Sbjct: 449 VTI 451



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 38/71 (53%), Positives = 51/71 (71%), Gaps = 4/71 (5%)

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
           F+ Y+I   QTWTE +GE  +RE+ V KG++    V +F P SKN+AR+LA+NG +NGPP
Sbjct: 849 FKGYKI---QTWTENEGEEGLREIHV-KGDTHNALVTQFKPDSKNYARILAYNGRFNGPP 904

Query: 731 SEIISFVTPEG 741
           S +I F TPEG
Sbjct: 905 SAVIDFDTPEG 915


>gi|224586970|gb|ACN58584.1| RT01988p [Drosophila melanogaster]
          Length = 1108

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 266/490 (54%), Positives = 338/490 (68%), Gaps = 11/490 (2%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           RSEYKIGN++LL+V   G+SASQN+H P +QYV+R++ +ALR K++ELFCI+GGTPLPQT
Sbjct: 196 RSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQT 255

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +WSKDG  I  SDRI+QG+YGKSL+I+   F D G+YTC+VSNGVG A+S+SI L+V + 
Sbjct: 256 VWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIILNVNSV 315

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFT EPE   AAE+E V FEC+A+G+PEP+I W+HNGKPI Q+ PNPRR V  N I I 
Sbjct: 316 PYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNPRRTVTDNTIRII 375

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
           NL K DTGNYGCNATNSLGYVYKDVY+NV A  P I+EAP    TVDG+ V + CRV G+
Sbjct: 376 NLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVDGRNVTIKCRVNGS 435

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP V W+     LTGGRY +   GDL+I DV F+D+G+YTC+A+NK G  Q  GSL VK
Sbjct: 436 PKPLVKWLRASNWLTGGRYNVQANGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVK 495

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           EHT IT +P++YEV AGQSATFRCN   D +L++ I W +  + IDFE++PRFV++ND S
Sbjct: 496 EHTRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSIDFEAQPRFVKTNDNS 555

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           LT+ K+ ELDSG+YTC A+T LD   A+A L VQ    AP   T I    A KA + W  
Sbjct: 556 LTIAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAPK-LTGI-TCQADKAEIHWEQ 613

Query: 426 VSPQSLRGHFRGYKVQ---TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLA 482
                 R     Y +Q   ++T    + +  E + N   S   ++    P +    RV+A
Sbjct: 614 QGDN--RSPILHYTIQFNTSFTPASWDAAY-EKVPNTDSSFVVQMS---PWANYTFRVIA 667

Query: 483 FNGAYNGPPS 492
           FN     PPS
Sbjct: 668 FNKIGASPPS 677



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 118/241 (48%), Positives = 156/241 (64%), Gaps = 10/241 (4%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            PL+AP+NFT+ Q+  +    ++W PVS +S+RGHF+GYK+QTWTE +GE  +RE+ V KG
Sbjct: 792  PLDAPTNFTMRQITSSTSGYMAWTPVSEESVRGHFKGYKIQTWTENEGEEGLREIHV-KG 850

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
            ++    V +F P SKN+AR+LA+NG +NGPPS +I F TPEGVP  VQ L+A PLGSSAF
Sbjct: 851  DTHNALVTQFKPDSKNYARILAYNGRFNGPPSAVIDFDTPEGVPSPVQGLDAYPLGSSAF 910

Query: 521  YLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRI 580
             L W KP  PNG L GYKI Y+ VK + VG   E  P+I+DP  T  K+AGL+P++KYRI
Sbjct: 911  MLHWKKPLYPNGKLTGYKIYYEEVKESYVGERREYDPHITDPRVTRMKMAGLKPNSKYRI 970

Query: 581  HLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
             +   TK G+G+E  Y+     K+  NV      P     SW  +P     A   K+RI 
Sbjct: 971  SITATTKMGEGSE-HYIEKTTLKDAVNV-----APATPSFSWEQLPSDNGLA---KFRIN 1021

Query: 641  W 641
            W
Sbjct: 1022 W 1022



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 163/597 (27%), Positives = 257/597 (43%), Gaps = 69/597 (11%)

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV 206
           C   G P P+  W  +G+ I  +    +   G + + I      D G Y C+ +N +G  
Sbjct: 245 CIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKS-LVIRQTNFDDAGTYTCDVSNGVGNA 303

Query: 207 YKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG---- 262
                +  +   P  T+ P+     + + VV  CR  G P+P+++WIHN K +       
Sbjct: 304 QSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNP 363

Query: 263 RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK-EHTHITDQPEDYEVEA 321
           R T+ +   ++I ++   D+G Y C A N LG       L V+ E   I++ P       
Sbjct: 364 RRTVTDN-TIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVD 422

Query: 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF-VQSNDYSLTVTKSSELDSGQYT 380
           G++ T +C     P  K  + WLR S   ++ +  R+ VQ+N   L +   +  D+G+YT
Sbjct: 423 GRNVTIKCRVNGSP--KPLVKWLRAS---NWLTGGRYNVQANG-DLEIQDVTFSDAGKYT 476

Query: 381 CRAQTELDFIEAQATLTVQVPL---EAPSNFTLIQVIDAKKAVVSWNPVSPQSLR----- 432
           C AQ +   I+A  +L V+      + P N+   +V   + A    N     +L      
Sbjct: 477 CYAQNKFGEIQADGSLVVKEHTRITQEPQNY---EVAAGQSATFRCNEAHDDTLEIEIDW 533

Query: 433 ---GHFRGYKVQTWTEKDGEGSI---RELIVNKGESTTTEVDKFVPASKNFARV-LAFNG 485
              G    ++ Q    K  + S+   + + ++ GE T     +   A+   AR  L    
Sbjct: 534 WKDGQSIDFEAQPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEAT---ARANLIVQD 590

Query: 486 AYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVK 545
             N P                   L  I   +    + W +       ++ Y I++    
Sbjct: 591 VPNAP------------------KLTGITCQADKAEIHWEQQGDNRSPILHYTIQFN--- 629

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY------ 599
            T   P      Y   P T S+ +  + P   Y   +  + K G    S +         
Sbjct: 630 -TSFTPASWDAAYEKVPNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPD 688

Query: 600 VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
           VPFKNPDNV G+G+ PNNLVISWT MPEIEHNAP+F Y + W+R     AW  +++ DWR
Sbjct: 689 VPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWR 748

Query: 660 QSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 716
           Q+ +V+A+QPTF  Y IKVV      +   +  E++   GE      D+ + A  NF
Sbjct: 749 QNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGE------DRPLDAPTNF 799



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 161/398 (40%), Gaps = 51/398 (12%)

Query: 43  EVALRNKKVE----LFCIFGGTPLPQTIWSKDGVPIN---PSDRISQGNYGKSLIIKHVE 95
           +VA +NK+ +    + C   G P P+  W K+G   +     +R+ +     +L+I   +
Sbjct: 20  KVAQQNKESDNPFIIECEADGQPEPEYSWIKNGKKFDWQAYDNRMLRQPGRGTLVITIPK 79

Query: 96  FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECKA-SGLP 153
             D+G Y C  SN  G A S S+ +       F  E  + + A E E    +C A  G P
Sbjct: 80  DEDRGHYQCFASNEFGTATSNSVYVRKAELNAFKDEAAKTLEAVEGEPFMLKCAAPDGFP 139

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--------NLRKSDTGN---YGCNATNS 202
            P ++W+     I ++     + +  +R+T++        N+ + D  +   Y C+AT+ 
Sbjct: 140 SPTVNWM-----IQESIDGSIKSINNSRMTLDPEGNLWFSNVTREDASSDFYYACSATSV 194

Query: 203 LGYVYK---DVYVNVL---AHAPEITEAPKDEY-------TVDGKTVVLTCRVFGAPKPE 249
               YK    V ++V      A +    P  +Y        + GK + L C   G P P+
Sbjct: 195 FRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQ 254

Query: 250 VNW------IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG-SGSL 302
             W      I     +T G Y       L I    F D+G YTC   N +G AQ  S  L
Sbjct: 255 TVWSKDGQRIQWSDRITQGHY----GKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIIL 310

Query: 303 TVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
            V    + T +PE       +   F C A   P  K+S  W+   +PI+  +        
Sbjct: 311 NVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKIS--WIHNGKPIEQSTPNPRRTVT 368

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           D ++ +    + D+G Y C A   L ++     L VQ 
Sbjct: 369 DNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQA 406



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 38/71 (53%), Positives = 51/71 (71%), Gaps = 4/71 (5%)

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
           F+ Y+I   QTWTE +GE  +RE+ V KG++    V +F P SKN+AR+LA+NG +NGPP
Sbjct: 826 FKGYKI---QTWTENEGEEGLREIHV-KGDTHNALVTQFKPDSKNYARILAYNGRFNGPP 881

Query: 731 SEIISFVTPEG 741
           S +I F TPEG
Sbjct: 882 SAVIDFDTPEG 892


>gi|195480086|ref|XP_002101132.1| GE15791 [Drosophila yakuba]
 gi|194188656|gb|EDX02240.1| GE15791 [Drosophila yakuba]
          Length = 1239

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 265/490 (54%), Positives = 339/490 (69%), Gaps = 11/490 (2%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           RSEYKIGN++LL+V   G+SASQN+H P +QYV+R++ +ALR K++ELFCI+GGTPLPQT
Sbjct: 219 RSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQT 278

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +WS+DG  I  SDRI+QG+YGKSL+I+   F D G+YTC+VSNGVG A+S+SI L+V + 
Sbjct: 279 VWSRDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIILNVNSV 338

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFT EPE   AAE+E V FEC+A+G+PEP+I W+HNGKPI Q+ PNPRR V  N I I 
Sbjct: 339 PYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNPRRTVTDNTIRII 398

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
           NL K DTGNYGCNATNSLGYVYKDVY+NV A  P I+EAP    TVDG+ V + CRV G+
Sbjct: 399 NLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVDGRNVTIKCRVNGS 458

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP V W+ +   LTGGRY +   GDL+I DV F+D+G+YTC+A+NK G  Q  GSL VK
Sbjct: 459 PKPLVKWLRSSNWLTGGRYNVQANGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVK 518

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           EHT IT +P++YEV AGQSATFRCN   D +L++ I W +  + IDFE++PRFV++ND S
Sbjct: 519 EHTRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSIDFEAQPRFVKTNDNS 578

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           LT+ K+ ELDSG+YTC A+T LD   A+A L VQ    AP   T I    A KA + W  
Sbjct: 579 LTIAKTIELDSGEYTCVARTRLDEATARANLIVQDVPNAPK-LTGI-TCQADKAEIHWEQ 636

Query: 426 VSPQSLRGHFRGYKVQ---TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLA 482
                 R     Y +Q   ++T    + +  E + N   S   ++    P +    RV+A
Sbjct: 637 QGDN--RSPILHYTIQFNTSFTPSSWDAAY-EKVPNTDSSFVVQMS---PWANYTFRVIA 690

Query: 483 FNGAYNGPPS 492
           FN     PPS
Sbjct: 691 FNKIGASPPS 700



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 119/241 (49%), Positives = 157/241 (65%), Gaps = 10/241 (4%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            PL+AP+NFT+ Q+  +  A ++W PVS +S+RGHF+GYK+QTW+E +GE  +RE+ V KG
Sbjct: 815  PLDAPTNFTMRQITSSTSAYMAWTPVSEESVRGHFKGYKIQTWSENEGEEGLREIHV-KG 873

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
            ++    V +F P SKNFAR+LA+NG +NGPPS +I F TPEGVP  VQ L+A PLGSSAF
Sbjct: 874  DAHNALVTQFKPDSKNFARILAYNGRFNGPPSAVIDFDTPEGVPSPVQGLDAYPLGSSAF 933

Query: 521  YLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRI 580
             L W KP  PNG L GYKI Y+ VK + VG   E  P+I+DP  T  K+AGL+P++KYRI
Sbjct: 934  MLHWKKPLYPNGKLTGYKIYYEEVKESYVGERREHDPHITDPRITHMKMAGLKPNSKYRI 993

Query: 581  HLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
             +   TK G+G+E  Y+     K+  NV      P     SW  +P     A   K+RI 
Sbjct: 994  SITATTKMGEGSE-HYIEKTTLKDAVNV-----APATPSFSWEQLPSDNGLA---KFRIN 1044

Query: 641  W 641
            W
Sbjct: 1045 W 1045



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 163/597 (27%), Positives = 257/597 (43%), Gaps = 69/597 (11%)

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV 206
           C   G P P+  W  +G+ I  +    +   G + + I      D G Y C+ +N +G  
Sbjct: 268 CIYGGTPLPQTVWSRDGQRIQWSDRITQGHYGKS-LVIRQTNFDDAGTYTCDVSNGVGNA 326

Query: 207 YKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG---- 262
                +  +   P  T+ P+     + + VV  CR  G P+P+++WIHN K +       
Sbjct: 327 QSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNP 386

Query: 263 RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK-EHTHITDQPEDYEVEA 321
           R T+ +   ++I ++   D+G Y C A N LG       L V+ E   I++ P       
Sbjct: 387 RRTVTDN-TIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVD 445

Query: 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF-VQSNDYSLTVTKSSELDSGQYT 380
           G++ T +C     P  K  + WLR S   ++ +  R+ VQ+N   L +   +  D+G+YT
Sbjct: 446 GRNVTIKCRVNGSP--KPLVKWLRSS---NWLTGGRYNVQANG-DLEIQDVTFSDAGKYT 499

Query: 381 CRAQTELDFIEAQATLTVQVPL---EAPSNFTLIQVIDAKKAVVSWNPVSPQSLR----- 432
           C AQ +   I+A  +L V+      + P N+   +V   + A    N     +L      
Sbjct: 500 CYAQNKFGEIQADGSLVVKEHTRITQEPQNY---EVAAGQSATFRCNEAHDDTLEIEIDW 556

Query: 433 ---GHFRGYKVQTWTEKDGEGSI---RELIVNKGESTTTEVDKFVPASKNFARV-LAFNG 485
              G    ++ Q    K  + S+   + + ++ GE T     +   A+   AR  L    
Sbjct: 557 WKDGQSIDFEAQPRFVKTNDNSLTIAKTIELDSGEYTCVARTRLDEAT---ARANLIVQD 613

Query: 486 AYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVK 545
             N P                   L  I   +    + W +       ++ Y I++    
Sbjct: 614 VPNAP------------------KLTGITCQADKAEIHWEQQGDNRSPILHYTIQFN--- 652

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY------ 599
            T   P      Y   P T S+ +  + P   Y   +  + K G    S +         
Sbjct: 653 -TSFTPSSWDAAYEKVPNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPD 711

Query: 600 VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
           VPFKNPDNV G+G+ PNNLVISWT MPEIEHNAP+F Y + W+R     AW  +++ DWR
Sbjct: 712 VPFKNPDNVVGQGNEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWR 771

Query: 660 QSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 716
           Q+ +V+A+QPTF  Y IKVV      +   +  E++   GE      D+ + A  NF
Sbjct: 772 QNNIVIADQPTFVKYLIKVVAINERGESNVAAEEVVGYSGE------DRPLDAPTNF 822



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 108/422 (25%), Positives = 169/422 (40%), Gaps = 56/422 (13%)

Query: 43  EVALRNKKVE----LFCIFGGTPLPQTIWSKDGVPIN---PSDRISQGNYGKSLIIKHVE 95
           +VA +NK+++    + C   G P P+  W K+G   +     +R+ +     +L+I   +
Sbjct: 43  KVAQQNKEIDNPFIIECEADGQPEPEYSWIKNGKKFDWQAYDNRMLRQPGRGTLVITIPK 102

Query: 96  FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECKA-SGLP 153
             D+G Y C  SN  G A S S+ +       F  E P+   A E E    +C A  G P
Sbjct: 103 DEDRGHYQCFASNEFGTATSNSVYVRKAELNAFKDEPPKSQEAVEGEPFMLKCAAPDGFP 162

Query: 154 EPEIHWV------HNGKPISQAPPNPRRKVGP-NRITIENLRKSDTGN---YGCNATNSL 203
            P ++W+       N K I+    N R  + P   +   N+ + D  +   Y C+AT+  
Sbjct: 163 SPTVNWMIQDSFDGNIKSIN----NSRMTLDPEGNLWFSNVTREDASSDFYYACSATSVF 218

Query: 204 GYVYK---DVYVNVL---AHAPEITEAPKDEY-------TVDGKTVVLTCRVFGAPKPEV 250
              YK    V ++V      A +    P  +Y        + GK + L C   G P P+ 
Sbjct: 219 RSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQT 278

Query: 251 NW------IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG-SGSLT 303
            W      I     +T G Y       L I    F D+G YTC   N +G AQ  S  L 
Sbjct: 279 VWSRDGQRIQWSDRITQGHY----GKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIILN 334

Query: 304 VKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSND 363
           V    + T +PE       +   F C A   P  K+S  W+   +PI+  +        D
Sbjct: 335 VNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKIS--WIHNGKPIEQSTPNPRRTVTD 392

Query: 364 YSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP----LEAPSNFTLIQVIDAKKA 419
            ++ +    + D+G Y C A   L ++     L VQ       EAP+    +  +D +  
Sbjct: 393 NTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPA---AVSTVDGRNV 449

Query: 420 VV 421
            +
Sbjct: 450 TI 451



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/71 (53%), Positives = 51/71 (71%), Gaps = 4/71 (5%)

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
           F+ Y+I   QTW+E +GE  +RE+ V KG++    V +F P SKNFAR+LA+NG +NGPP
Sbjct: 849 FKGYKI---QTWSENEGEEGLREIHV-KGDAHNALVTQFKPDSKNFARILAYNGRFNGPP 904

Query: 731 SEIISFVTPEG 741
           S +I F TPEG
Sbjct: 905 SAVIDFDTPEG 915


>gi|195173863|ref|XP_002027704.1| GL22653 [Drosophila persimilis]
 gi|194114650|gb|EDW36693.1| GL22653 [Drosophila persimilis]
          Length = 1309

 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 251/420 (59%), Positives = 309/420 (73%), Gaps = 2/420 (0%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           RSEYKIGN++LL+V   G+SASQN+H P +QYV+R++ +ALR K++ELFCI+GGTPLPQT
Sbjct: 218 RSEYKIGNKVLLDVKQMGVSASQNKHQPIRQYVSRRQSLALRGKRMELFCIYGGTPLPQT 277

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +WSKDG  I  SDRI+QG+YGKSLII+   F D G+YTC+VSNGVG A+S+SI L V A 
Sbjct: 278 VWSKDGHRIQWSDRITQGHYGKSLIIRQTNFDDNGTYTCDVSNGVGNAQSFSIILEVNAI 337

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFTVEP+     E+E V F+C+A+G PEP+I W+HNGKPI Q+ PNPRR V  N I I 
Sbjct: 338 PYFTVEPDSRRPPEDEEVVFQCEAAGFPEPKISWIHNGKPIEQSTPNPRRTVTDNTIRIV 397

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
           NL KSDTGNYGCNATNSLGYVYKDV++NV A  PEI E P    TVDG+ V L CRV GA
Sbjct: 398 NLVKSDTGNYGCNATNSLGYVYKDVFLNVQALPPEIEEPPTALSTVDGRNVTLRCRVTGA 457

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP+V W+     LTGGRY +   GDL+I DV F+D+G+YTC+A NK G     GSLTV 
Sbjct: 458 PKPQVRWLRATNWLTGGRYIVQANGDLQILDVTFSDAGQYTCYAENKFGNKSAEGSLTVM 517

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           EHT IT +P++YEV AGQSATFRCN   D +L++ I W +  +PIDFE++PRFV++ND S
Sbjct: 518 EHTRITQEPQNYEVAAGQSATFRCNEAHDGNLEIEIDWWKDGQPIDFEAQPRFVKTNDNS 577

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           LT+ K+ ELDSG+Y+C A T LD   A+A L VQ    AP   T I    A KA + W P
Sbjct: 578 LTIAKTMELDSGKYSCVACTRLDQATAKANLIVQDVPNAPK-LTGI-TCQADKAEIMWEP 635



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 124/249 (49%), Positives = 163/249 (65%), Gaps = 11/249 (4%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            PL+AP+NFT+ Q+  A  A ++W PVS +S+RGHF+GYK+QTWTEK+GE  +RE+ V KG
Sbjct: 814  PLDAPTNFTMRQITTATSAYLAWTPVSEESVRGHFKGYKIQTWTEKEGEEGLREIHV-KG 872

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
            ++ T  V +F P SKNFAR+LA+NG +NGPPS II F TPEGVP  VQSL+A PLGSSAF
Sbjct: 873  DTDTALVTQFKPDSKNFARILAYNGRFNGPPSAIIDFDTPEGVPSPVQSLDAHPLGSSAF 932

Query: 521  YLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRI 580
            ++ W KP  PNG L GYKI Y+ V+G+ VG   E  P+I+DP  T  K+AGL+P TKYRI
Sbjct: 933  WVTWKKPLHPNGKLTGYKIYYEEVQGSFVGERREYDPHITDPRITRMKMAGLKPKTKYRI 992

Query: 581  HLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
             +   TK G+G E     Y+      +     +TP+    +W  +P     A   K+RI 
Sbjct: 993  SITATTKMGEGTE----HYIEKSTLGDSNLAPATPS---FAWEQLPSDNGQA---KFRIN 1042

Query: 641  WRRHNTGEA 649
            W+    G A
Sbjct: 1043 WQPSTEGHA 1051



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 157/590 (26%), Positives = 245/590 (41%), Gaps = 55/590 (9%)

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV 206
           C   G P P+  W  +G  I  +    +   G + I I      D G Y C+ +N +G  
Sbjct: 267 CIYGGTPLPQTVWSKDGHRIQWSDRITQGHYGKSLI-IRQTNFDDNGTYTCDVSNGVGNA 325

Query: 207 YKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG---- 262
                +  +   P  T  P      + + VV  C   G P+P+++WIHN K +       
Sbjct: 326 QSFSIILEVNAIPYFTVEPDSRRPPEDEEVVFQCEAAGFPEPKISWIHNGKPIEQSTPNP 385

Query: 263 RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPEDYEVEA 321
           R T+ +   ++I ++  +D+G Y C A N LG       L V+     I + P       
Sbjct: 386 RRTVTDN-TIRIVNLVKSDTGNYGCNATNSLGYVYKDVFLNVQALPPEIEEPPTALSTVD 444

Query: 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTC 381
           G++ T RC     P  K  + WLR +   ++ +  R++   +  L +   +  D+GQYTC
Sbjct: 445 GRNVTLRCRVTGAP--KPQVRWLRAT---NWLTGGRYIVQANGDLQILDVTFSDAGQYTC 499

Query: 382 RAQTELDFIEAQATLTVQVPL---EAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGY 438
            A+ +     A+ +LTV       + P N+   +V   + A    N     +L       
Sbjct: 500 YAENKFGNKSAEGSLTVMEHTRITQEPQNY---EVAAGQSATFRCNEAHDGNLE-----I 551

Query: 439 KVQTWTEK---DGEGSIRELIVNKGEST---TTEVDKFVPASKNFARVLAFNGAYNGPPS 492
           ++  W +    D E   R +  N    T   T E+D    +     R+       N    
Sbjct: 552 EIDWWKDGQPIDFEAQPRFVKTNDNSLTIAKTMELDSGKYSCVACTRLDQATAKAN---- 607

Query: 493 EIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPL 552
                +  + VP   + L  I   +    + W         ++ Y I++     T   P 
Sbjct: 608 -----LIVQDVPNAPK-LTGITCQADKAEIMWEPQGDNRSPILHYTIQFN----TSFTPA 657

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY------VPFKNPD 606
                +   P T  + +  + P   Y   +  + K G    S +         VPFKNPD
Sbjct: 658 SWDTAFEKVPNTDFSFVVQMSPWANYTFRVIAFNKIGASQPSAHSESCTTQPDVPFKNPD 717

Query: 607 NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLA 666
           NV G+G+ PNNLVISWT MPEIEHNAP F+YR+ W+R     AW   D+ +W Q+ +V+ 
Sbjct: 718 NVVGQGTEPNNLVISWTPMPEIEHNAPKFQYRVSWKRDIPAAAWENKDINEWHQNNIVIT 777

Query: 667 NQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 716
           +QPTF  Y IKVV      +   +  E+I   GE      D+ + A  NF
Sbjct: 778 DQPTFVKYHIKVVAINERGESNVAAEEVIGYSGE------DRPLDAPTNF 821



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 104/420 (24%), Positives = 171/420 (40%), Gaps = 52/420 (12%)

Query: 43  EVALRNKKVE----LFCIFGGTPLPQTIWSKDGVPIN---PSDRISQGNYGKSLIIKHVE 95
           +VA +NK+ +    + C   G P P+  W K+G   +     DR+ +     +L+I   +
Sbjct: 42  KVAQQNKESDNPFIIECEADGQPEPEYSWIKNGKKFDWQAYDDRMLRQPGRGTLVITSPK 101

Query: 96  FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECKA-SGLP 153
             D+G Y C  SN  G A S S+ +       F  E  + + A E E    +C A  G P
Sbjct: 102 DEDRGHYQCFASNEFGTATSNSVYVRKAELNAFKDEAAKTVVAVEGEPFMLKCAAPDGFP 161

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--------NLRKSDTGN---YGCNATNS 202
            P ++W+     + Q+     + +  +R+T++        N+ + D  +   Y C+AT+ 
Sbjct: 162 SPTVNWM-----MQQSIDGSIKSINNSRMTLDPEGNLWFSNVTRDDASDDFYYACSATSV 216

Query: 203 LGYVYK---DVYVNVL---AHAPEITEAPKDEY-------TVDGKTVVLTCRVFGAPKPE 249
               YK    V ++V      A +    P  +Y        + GK + L C   G P P+
Sbjct: 217 FRSEYKIGNKVLLDVKQMGVSASQNKHQPIRQYVSRRQSLALRGKRMELFCIYGGTPLPQ 276

Query: 250 VNW------IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG-SGSL 302
             W      I     +T G Y       L I    F D+G YTC   N +G AQ  S  L
Sbjct: 277 TVWSKDGHRIQWSDRITQGHY----GKSLIIRQTNFDDNGTYTCDVSNGVGNAQSFSIIL 332

Query: 303 TVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
            V    + T +P+       +   F+C A   P  K+S  W+   +PI+  +        
Sbjct: 333 EVNAIPYFTVEPDSRRPPEDEEVVFQCEAAGFPEPKIS--WIHNGKPIEQSTPNPRRTVT 390

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVV 421
           D ++ +    + D+G Y C A   L ++     L VQ +P E     T +  +D +   +
Sbjct: 391 DNTIRIVNLVKSDTGNYGCNATNSLGYVYKDVFLNVQALPPEIEEPPTALSTVDGRNVTL 450



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/71 (59%), Positives = 53/71 (74%), Gaps = 4/71 (5%)

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
           F+ Y+I   QTWTEK+GE  +RE+ V KG++ T  V +F P SKNFAR+LA+NG +NGPP
Sbjct: 848 FKGYKI---QTWTEKEGEEGLREIHV-KGDTDTALVTQFKPDSKNFARILAYNGRFNGPP 903

Query: 731 SEIISFVTPEG 741
           S II F TPEG
Sbjct: 904 SAIIDFDTPEG 914


>gi|328705404|ref|XP_003242788.1| PREDICTED: neuroglian-like [Acyrthosiphon pisum]
          Length = 1128

 Score =  509 bits (1312), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 303/747 (40%), Positives = 427/747 (57%), Gaps = 63/747 (8%)

Query: 7   SEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTI 66
           SE+K GN + +NVI T  +  QN++ P +QYV R+ EVAL NK VELFCI+GG+PLPQTI
Sbjct: 219 SEFKYGNPVYINVIQTAGTLLQNKYPPVRQYVNRRNEVALLNKAVELFCIYGGSPLPQTI 278

Query: 67  WSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAP 126
           W KDG  I  ++RI   NYGKS II+ V F D+G YTCEVSNGVG  +SY+I L V+A P
Sbjct: 279 WLKDGRAIQFNERIILKNYGKSFIIRKVNFEDRGKYTCEVSNGVGLPESYNIVLDVMAVP 338

Query: 127 YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIEN 186
            FT+ P+ +   E ET   +C+ASG P+P I W+HNG+P+++A PNPRR V  N ITI +
Sbjct: 339 SFTIIPQIVEGGEGETAVIKCEASGNPQPSIKWIHNGRPLNEASPNPRRSVTSNCITITS 398

Query: 187 LRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAP 246
           L K+DTGNYGCNATNS+GYVYKDVY+NVLA APEI E  ++  T +G T V+ C+  G P
Sbjct: 399 LTKNDTGNYGCNATNSIGYVYKDVYINVLALAPEIVELSQNVKTFEGSTTVIKCKSSGVP 458

Query: 247 KPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE 306
           KP   W  N  E+TGGRYT L+ GDL+I  ++F D+G Y C A N  GTA  S +LTVKE
Sbjct: 459 KPHTKWTKNNIEITGGRYTTLDNGDLQIRGISFTDAGIYICIATNNYGTANASVTLTVKE 518

Query: 307 HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
           HT I  +PED  V +G   TF+C A++D SL L IVWL  +EPI++ ++PR+V++ND+S+
Sbjct: 519 HTKIITEPEDNVVVSGSMVTFQCTAIADHSLNLKIVWLANNEPINYYTQPRYVKNNDHSM 578

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVI-DAKKAVVSWNP 425
           T+TK+ ELDSG YTC A+TELD + A ATL VQ   + P+  T++++I + + AVV W  
Sbjct: 579 TITKTIELDSGIYTCLAKTELDQVSANATLIVQ---DKPNPPTVLEIICNNRNAVVKWKS 635

Query: 426 VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS--KNFA-RVLA 482
           +     R     Y V+  T  D  G+    +V       + ++  VP +   NF  RV+A
Sbjct: 636 MGDN--RARIIRYTVEYNTSFD-PGT---WLVASDNVPASNLELIVPMTPWANFTFRVIA 689

Query: 483 FNGAYNGPPSEIISFVT--PEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
            N      PS   S  T  P+      +++EA  +  S   + W     P        ++
Sbjct: 690 KNNVGKSNPSLHSSVCTTQPDVPYKNPENIEAYSVEPSKLVISWTP--MPKICHNAPGLR 747

Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGD--GAESKYLF 598
           Y+      +   +     I++ T     +        Y++ +  + + G+  G + + + 
Sbjct: 748 YRVYWKQNILGEVWNFKEITNYTINKLSIPNQPIDKHYKVKIVAFNEKGESIGLQKEVIG 807

Query: 599 Y----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
           Y    VP   P N+     T  N+  S +A+   E  +P                     
Sbjct: 808 YSEENVPVDAPQNL-----TVINVTGSKSAILSWEPVSPE-------------------- 842

Query: 655 VLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 714
                      + + TF+ Y+I   Q WT++DG+ +  E  V+  + TT E+  F P +K
Sbjct: 843 -----------SVKGTFKGYKI---QFWTDRDGKNNKIEEKVSL-DRTTVEIKTFFPNAK 887

Query: 715 NFARVLAFNGAYNGPPSEIISFVTPEG 741
           NF  + A+N  +NGP SE+ISF TPEG
Sbjct: 888 NFVLIFAYNSRFNGPRSELISFDTPEG 914



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/192 (50%), Positives = 132/192 (68%), Gaps = 2/192 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP++AP N T+I V  +K A++SW PVSP+S++G F+GYK+Q WT++DG+ +  E  V+ 
Sbjct: 813  VPVDAPQNLTVINVTGSKSAILSWEPVSPESVKGTFKGYKIQFWTDRDGKNNKIEEKVSL 872

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             + TT E+  F P +KNF  + A+N  +NGP SE+ISF TPEGVPG V  +E    GSSA
Sbjct: 873  -DRTTVEIKTFFPNAKNFVLIFAYNSRFNGPRSELISFDTPEGVPGPVHGVETDQWGSSA 931

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYR 579
              L W  P++PNGVL GY+I Y+S+    VG    +LP I++P  T+AKLA L+PST YR
Sbjct: 932  ILLSWQPPDEPNGVLTGYEISYESMTQRGVGE-RAKLPSITNPKQTTAKLASLKPSTNYR 990

Query: 580  IHLAGYTKAGDG 591
            I++   TKAG G
Sbjct: 991  IYIQATTKAGVG 1002



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 159/370 (42%), Gaps = 31/370 (8%)

Query: 55  CIFGGTPLPQTIWSKDGVPIN---PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVG 111
           C   G P+P+  W K+G   +     DRI+Q     SL++      D G Y C   N  G
Sbjct: 62  CEAEGEPVPKYRWMKNGKNFDWQAYDDRIAQKPGSGSLVVIKPRDEDLGQYQCFAENSWG 121

Query: 112 EAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKPISQA 169
            A S S+ +       F+ EP  +I+A E E     C   +  P+P ++W+   +  + A
Sbjct: 122 IATSKSVMVVKAELNLFSNEPNLYIDAQEGEPFKLSCHPPTAWPKPVVNWLKKNENGTNA 181

Query: 170 PPNPRRKVGPN-RITIENLRKSDTGN-YGCNATNSLGYVYK---DVYVNVLAHAPEITEA 224
             + R  V P   +    + + D  + Y C A + +   +K    VY+NV+  A  + + 
Sbjct: 182 VDSSRITVDPEGNLWFSYVTQHDANSEYHCYAKSLIMSEFKYGNPVYINVIQTAGTLLQN 241

Query: 225 P----------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILET--GDL 272
                      ++E  +  K V L C   G+P P+  W+ + + +      IL+      
Sbjct: 242 KYPPVRQYVNRRNEVALLNKAVELFCIYGGSPLPQTIWLKDGRAIQFNERIILKNYGKSF 301

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSG-SLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
            I  V F D G+YTC   N +G  +     L V      T  P+  E   G++A  +C A
Sbjct: 302 IIRKVNFEDRGKYTCEVSNGVGLPESYNIVLDVMAVPSFTIIPQIVEGGEGETAVIKCEA 361

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEP---RFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
             +P  + SI W+    P++ E+ P   R V SN   +T+T  ++ D+G Y C A   + 
Sbjct: 362 SGNP--QPSIKWIHNGRPLN-EASPNPRRSVTSN--CITITSLTKNDTGNYGCNATNSIG 416

Query: 389 FIEAQATLTV 398
           ++     + V
Sbjct: 417 YVYKDVYINV 426



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 117/294 (39%), Gaps = 26/294 (8%)

Query: 145 FECKASGLPEPEIHWVHNGKPISQAPPNPR--RKVGPNRITIENLRKSDTGNYGCNATNS 202
            +C+A G P P+  W+ NGK       + R  +K G   + +   R  D G Y C A NS
Sbjct: 60  IDCEAEGEPVPKYRWMKNGKNFDWQAYDDRIAQKPGSGSLVVIKPRDEDLGQYQCFAENS 119

Query: 203 LGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGA-PKPEVNWIHNQKELT 260
            G       + V A     +  P       +G+   L+C    A PKP VNW+   +  T
Sbjct: 120 WGIATSKSVMVVKAELNLFSNEPNLYIDAQEGEPFKLSCHPPTAWPKPVVNWLKKNENGT 179

Query: 261 GG----RYTILETGDLKITDVAFADS-GEYTCFARN------------KLGTAQGSGSLT 303
                 R T+   G+L  + V   D+  EY C+A++             +   Q +G+L 
Sbjct: 180 NAVDSSRITVDPEGNLWFSYVTQHDANSEYHCYAKSLIMSEFKYGNPVYINVIQTAGTLL 239

Query: 304 VKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSND 363
             ++  +          A  +       +   S     +WL+    I F +E   +++  
Sbjct: 240 QNKYPPVRQYVNRRNEVALLNKAVELFCIYGGSPLPQTIWLKDGRAIQF-NERIILKNYG 298

Query: 364 YSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLI-QVIDA 416
            S  + K +  D G+YTC     +   E+     + + + A  +FT+I Q+++ 
Sbjct: 299 KSFIIRKVNFEDRGKYTCEVSNGVGLPES---YNIVLDVMAVPSFTIIPQIVEG 349



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 7/128 (5%)

Query: 227 DEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT--ILE---TGDLKITDVAFAD 281
           D+Y+ D K  ++ C   G P P+  W+ N K      Y   I +   +G L +      D
Sbjct: 50  DQYSND-KPFIIDCEAEGEPVPKYRWMKNGKNFDWQAYDDRIAQKPGSGSLVVIKPRDED 108

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+Y CFA N  G A     + VK   ++     +  ++A +   F+ +     +    +
Sbjct: 109 LGQYQCFAENSWGIATSKSVMVVKAELNLFSNEPNLYIDAQEGEPFKLSCHPPTAWPKPV 168

Query: 342 V-WLRGSE 348
           V WL+ +E
Sbjct: 169 VNWLKKNE 176


>gi|1708635|gb|AAC47451.1| neuroglian [Manduca sexta]
          Length = 1264

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 240/394 (60%), Positives = 293/394 (74%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           R+EYK GN+I L+V  TGIS + NRHAP++QY T K E AL+ KKVEL+CI+GGTPLPQ 
Sbjct: 214 RNEYKFGNKIYLDVTQTGISPTLNRHAPERQYTTTKIEKALKGKKVELYCIYGGTPLPQI 273

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +W KDG  I PS  I+Q NYGK+L+IK+  + D G+YTCEVSNGVG A SYSI L++ AA
Sbjct: 274 VWKKDGHNIIPSASITQDNYGKTLVIKYPNYEDSGTYTCEVSNGVGTALSYSIQLNIEAA 333

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P+FTVEP+  N AE ET    C+A G P P+I W+HNGKPI QA PNPRR+V  N I I 
Sbjct: 334 PFFTVEPDVQNLAEGETAVIRCEAGGTPVPKITWIHNGKPIEQAEPNPRRQVTANSIVIT 393

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
           +L K DTGNYGCNAT+S+GYVYKDVY+NV +  PEI E P++   VDG   VL CRVFGA
Sbjct: 394 DLVKKDTGNYGCNATSSIGYVYKDVYINVQSIPPEIKEGPENLTKVDGSEAVLKCRVFGA 453

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP V W+ +  ++TGG+Y I   GDL I DV+F D G Y C+A+NK G     GSL VK
Sbjct: 454 PKPIVKWMRDDVDITGGKYNITSEGDLVIRDVSFTDVGTYQCYAKNKFGEKSAFGSLAVK 513

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           + T ITD+PEDYEV AG SATFRCNA +D SLKL+IVWL   + IDFE++PRF  +NDYS
Sbjct: 514 KRTVITDKPEDYEVAAGSSATFRCNANADDSLKLTIVWLNDGQLIDFENQPRFRMTNDYS 573

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           L ++ ++ELDSGQYTC A+T +D   AQATLTVQ
Sbjct: 574 LLISDTTELDSGQYTCIAKTAIDEARAQATLTVQ 607



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/303 (44%), Positives = 180/303 (59%), Gaps = 33/303 (10%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            PL+AP+NFTL+QV     A++SWN V+P+S+RGHF+GYK+QTWT+ + E  ++E++V K 
Sbjct: 810  PLQAPANFTLVQVTTGTTALLSWNAVAPESVRGHFKGYKIQTWTDGE-EDRLKEILV-KA 867

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
            +ST+  V KF P  KN AR+L +NG +NGPPS+I+SF TPEG PGTV++    P+GSSA 
Sbjct: 868  DSTSALVTKFKPFKKNNARILVYNGRFNGPPSDILSFETPEGKPGTVRTFGVYPIGSSAM 927

Query: 521  YLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRI 580
             LKW KP   NGVL GYKI YQ V GT +GPL ER   I DP    AKLAGLEP+TKYRI
Sbjct: 928  LLKWEKPVDENGVLTGYKIYYQKVTGTSLGPLQERKKEI-DPKFDRAKLAGLEPNTKYRI 986

Query: 581  HLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTP-------------NNLVISWTAMPE 627
             +   TKAG+G E    +YV       V  +   P              ++++ W  +P 
Sbjct: 987  IIRAKTKAGEGDE----YYVEQTTKSAVTAKPEIPLFETRTLSAKEGTAHILVRW--IPS 1040

Query: 628  IE-HNAPHFKYRIFWRRHNTGEAW-NQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEK 685
            ++ H   HF   + W +      W   +D+ D     ++L      Q YE+KV    T  
Sbjct: 1041 LDGHAGSHF---VAWYKLKGMPDWLKTNDITD--DDYVILTGLEPGQVYEVKV----TAH 1091

Query: 686  DGE 688
            DGE
Sbjct: 1092 DGE 1094



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 149/565 (26%), Positives = 239/565 (42%), Gaps = 55/565 (9%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A + + V   C   G P P+I W  +G  I  +    +   G   + I+     D+G Y 
Sbjct: 253 ALKGKKVELYCIYGGTPLPQIVWKKDGHNIIPSASITQDNYG-KTLVIKYPNYEDSGTYT 311

Query: 197 CNATNSLGYVYK-DVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
           C  +N +G      + +N+ A AP  T  P  +   +G+T V+ C   G P P++ WIHN
Sbjct: 312 CEVSNGVGTALSYSIQLNIEA-APFFTVEPDVQNLAEGETAVIRCEAGGTPVPKITWIHN 370

Query: 256 QKELTGGR---YTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHIT 311
            K +          +    + ITD+   D+G Y C A + +G       + V+     I 
Sbjct: 371 GKPIEQAEPNPRRQVTANSIVITDLVKKDTGNYGCNATSSIGYVYKDVYINVQSIPPEIK 430

Query: 312 DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKS 371
           + PE+     G  A  +C     P  K  + W+R    I   +  ++  +++  L +   
Sbjct: 431 EGPENLTKVDGSEAVLKCRVFGAP--KPIVKWMRDDVDI---TGGKYNITSEGDLVIRDV 485

Query: 372 SELDSGQYTCRAQTELDFIEAQATLTVQ---VPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
           S  D G Y C A+ +     A  +L V+   V  + P ++   +V     A    N  + 
Sbjct: 486 SFTDVGTYQCYAKNKFGEKSAFGSLAVKKRTVITDKPEDY---EVAAGSSATFRCNANAD 542

Query: 429 QSLR--------GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
            SL+        G    ++ Q       + S+  LI +  E  + +       + + AR 
Sbjct: 543 DSLKLTIVWLNDGQLIDFENQPRFRMTNDYSL--LISDTTELDSGQYTCIAKTAIDEARA 600

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
            A     + P                  +L+ +  G++   L+W         ++ Y+I 
Sbjct: 601 QATLTVQDKP---------------NPPALDGVECGAATATLRWRSMGDNRAPVVRYQIH 645

Query: 541 YQ-SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY 599
           Y  S          + +P I    T       L P   Y   +    K G  + S +   
Sbjct: 646 YNTSFTPDSWAAAADHVPAIDTSWTVQ-----LSPWANYTFRVIAVNKIGPSSPSSHSDV 700

Query: 600 ------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQD 653
                 VP+KNPDNV+G GS P N+VISW+ MP+IEHN P F Y + WRR+ TG+ WN++
Sbjct: 701 CTTQPDVPYKNPDNVKGEGSDPTNMVISWSKMPQIEHNGPGFYYLVSWRRNITGDEWNKE 760

Query: 654 DVLDWRQSELVLANQPTFQPYEIKV 678
            V DW+Q+E ++ N PTFQPY+IKV
Sbjct: 761 QVRDWQQTEYIVTNTPTFQPYKIKV 785



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 149/629 (23%), Positives = 250/629 (39%), Gaps = 73/629 (11%)

Query: 55  CIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           C  GGTP+P+  W  +G PI     NP  +++      S++I  +   D G+Y C  ++ 
Sbjct: 355 CEAGGTPVPKITWIHNGKPIEQAEPNPRRQVT----ANSIVITDLVKKDTGNYGCNATSS 410

Query: 110 VGEA-KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQ 168
           +G   K   I++  +  P     PE +   +      +C+  G P+P + W+ +   I+ 
Sbjct: 411 IGYVYKDVYINVQSIP-PEIKEGPENLTKVDGSEAVLKCRVFGAPKPIVKWMRDDVDITG 469

Query: 169 APPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPEITEAPKD 227
              N   +     + I ++  +D G Y C A N  G   K  + ++ +     IT+ P+D
Sbjct: 470 GKYNITSE---GDLVIRDVSFTDVGTYQCYAKNKFGE--KSAFGSLAVKKRTVITDKPED 524

Query: 228 EYTVDGKTVVLTCRVFG--APKPEVNWIHNQKEL---TGGRYTILETGDLKITDVAFADS 282
                G +    C      + K  + W+++ + +      R+ +     L I+D    DS
Sbjct: 525 YEVAAGSSATFRCNANADDSLKLTIVWLNDGQLIDFENQPRFRMTNDYSLLISDTTELDS 584

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAG-QSATFRCNAVSD---PSLK 338
           G+YTC A+  +  A+   +LTV++     + P    VE G  +AT R  ++ D   P ++
Sbjct: 585 GQYTCIAKTAIDEARAQATLTVQDK---PNPPALDGVECGAATATLRWRSMGDNRAPVVR 641

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA-----------QTEL 387
             I +     P  + +    V + D S TV  S       YT R             +  
Sbjct: 642 YQIHYNTSFTPDSWAAAADHVPAIDTSWTVQLSP---WANYTFRVIAVNKIGPSSPSSHS 698

Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK- 446
           D    Q      VP + P N    +  D    V+SW+ + PQ        Y + +W    
Sbjct: 699 DVCTTQP----DVPYKNPDNVKG-EGSDPTNMVISWSKM-PQIEHNGPGFYYLVSWRRNI 752

Query: 447 DGEGSIRELIVN--KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV---TPE 501
            G+   +E + +  + E   T    F P       V  F G  N  P E+I +    TP 
Sbjct: 753 TGDEWNKEQVRDWQQTEYIVTNTPTFQPYKIKVTAV-NFKGTSNVTPVEVIGWSGEDTPL 811

Query: 502 GVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
             P    +L  +  G++A  L W  V PE   G   GYKI+      T      +RL  I
Sbjct: 812 QAPANF-TLVQVTTGTTAL-LSWNAVAPESVRGHFKGYKIQ------TWTDGEEDRLKEI 863

Query: 560 -SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL-FYVPFKNPDNVEGRGSTP-- 615
                +TSA +   +P  K    +  Y    +G  S  L F  P   P  V   G  P  
Sbjct: 864 LVKADSTSALVTKFKPFKKNNARILVYNGRFNGPPSDILSFETPEGKPGTVRTFGVYPIG 923

Query: 616 -NNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            + +++ W     ++ N     Y+I++++
Sbjct: 924 SSAMLLKWEK--PVDENGVLTGYKIYYQK 950



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/71 (50%), Positives = 51/71 (71%), Gaps = 5/71 (7%)

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
           F+ Y+I   QTWT+ + E  ++E++V K +ST+  V KF P  KN AR+L +NG +NGPP
Sbjct: 844 FKGYKI---QTWTDGE-EDRLKEILV-KADSTSALVTKFKPFKKNNARILVYNGRFNGPP 898

Query: 731 SEIISFVTPEG 741
           S+I+SF TPEG
Sbjct: 899 SDILSFETPEG 909



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 119/302 (39%), Gaps = 49/302 (16%)

Query: 145 FECK--ASGLPEPEIHWVHNGKPISQAPPNPR--RKVGPNRITIENLRKSDTGNYGCNAT 200
            EC+  A G P P+  W+ NGKP      + R  ++ G   + +   R  D G Y C A 
Sbjct: 50  IECRGEAEGEPGPKYRWIKNGKPFEYTSYDNRILQQSGRGTLVVSKPRDEDLGQYQCFAY 109

Query: 201 NSLGYVYKDVYVNVLAHAPEI-----TEAPKDEYTVDGKTVVLTCR-VFGAPKPEVNWI- 253
           N  G    +   +V     E+     T+  +     +GK   LTC    G PKP+V W+ 
Sbjct: 110 NEWGTAASN---SVFVRRAELNSFKETDGQQVVKAEEGKPFKLTCEPPDGHPKPKVYWML 166

Query: 254 ----HNQKELTGGRYTILETGDLKITDVAFADSG---EYTCFA----RNK--------LG 294
                  K +   R T+   G+L  ++V   D+     Y C A    RN+        L 
Sbjct: 167 QGDQGQLKTINNSRMTLDPEGNLWFSNVTRNDASVDFAYICTANSIFRNEYKFGNKIYLD 226

Query: 295 TAQGSGSLTVKEHT----HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPI 350
             Q   S T+  H     + T + E  +   G+     C     P  +  IVW +    I
Sbjct: 227 VTQTGISPTLNRHAPERQYTTTKIE--KALKGKKVELYCIYGGTPLPQ--IVWKKDGHNI 282

Query: 351 DFESEPRFVQSNDY--SLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNF 408
              +    +  ++Y  +L +   +  DSG YTC      + +    + ++Q+ +EA   F
Sbjct: 283 IPSAS---ITQDNYGKTLVIKYPNYEDSGTYTCEVS---NGVGTALSYSIQLNIEAAPFF 336

Query: 409 TL 410
           T+
Sbjct: 337 TV 338


>gi|266634534|dbj|BAI49425.1| neuroglian [Mythimna separata]
          Length = 1254

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 242/421 (57%), Positives = 304/421 (72%), Gaps = 6/421 (1%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           R+EYK GN+I L V  TGI+++ NRH P +QY TRK E AL+ KKVEL+CI+GGTPLPQ 
Sbjct: 221 RNEYKFGNKIYLQVTETGIASTLNRHEPVRQYTTRKVEKALKGKKVELYCIYGGTPLPQI 280

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +W K+G  I  S  I+Q NYGK+L+IK+  + DQG+YTCEVSNGVG A+SYSI L++ AA
Sbjct: 281 VWKKNGRSILSSQGITQDNYGKTLVIKYPTYEDQGTYTCEVSNGVGTAQSYSILLNIEAA 340

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P+FTVEPE  N AE E+   +C+ASG P P+I W+HNGKPI QA PNPRR+V  N I I 
Sbjct: 341 PFFTVEPEIQNLAEGESAEIKCEASGTPTPKITWIHNGKPIEQAEPNPRRQVTANTIVIT 400

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
           NL K DTGNYGCNAT+S+GYVYKDVY+NV +  PEI E P++   VDG   VL CRVFGA
Sbjct: 401 NLVKKDTGNYGCNATSSIGYVYKDVYINVQSIPPEIKEGPENLTRVDGSEAVLKCRVFGA 460

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP V W+ +  ++TGG+Y I   GDL I DV++ D G Y C+A+NK G     GSL VK
Sbjct: 461 PKPLVKWMKDDVDVTGGKYNITPEGDLVIRDVSYTDVGTYQCYAKNKFGEKSAFGSLDVK 520

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           + T ITD+PE YEV AG SATFRCNA +D SLKL I+WL   + IDFE++PRF  +NDYS
Sbjct: 521 KRTVITDKPEHYEVAAGSSATFRCNANADDSLKLQIIWLNDGQQIDFENQPRFRMTNDYS 580

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDA--KKAVVSW 423
           L ++ ++ELDSG+YTC A+T +D   AQATLTVQ     P    +I+ I+   K A + W
Sbjct: 581 LLISDTTELDSGEYTCIARTAIDEARAQATLTVQDKPNPP----VIESIECHEKTATLRW 636

Query: 424 N 424
           +
Sbjct: 637 H 637



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 211/683 (30%), Positives = 311/683 (45%), Gaps = 81/683 (11%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKS----LIIKHVEFSDQGSYTCEVSN 108
            L C   G P P   W KD V       ++ G Y  +    L+I+ V ++D G+Y C   N
Sbjct: 453  LKCRVFGAPKPLVKWMKDDV------DVTGGKYNITPEGDLVIRDVSYTDVGTYQCYAKN 506

Query: 109  GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP--EPEIHWVHNGKPI 166
              GE  ++   L V      T +PE    A   + TF C A+     + +I W+++G+ I
Sbjct: 507  KFGEKSAFG-SLDVKKRTVITDKPEHYEVAAGSSATFRCNANADDSLKLQIIWLNDGQQI 565

Query: 167  SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA-PEITEAP 225
                    R      + I +  + D+G Y C A  ++        + V     P + E+ 
Sbjct: 566  DFENQPRFRMTNDYSLLISDTTELDSGEYTCIARTAIDEARAQATLTVQDKPNPPVIESI 625

Query: 226  KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSG-- 283
            +       KT  L     G  +  +     Q   T       +T DL   +V   D+   
Sbjct: 626  E----CHEKTATLRWHSMGDNRAPILRYSIQYNTT----FTPDTWDLASDNVPAIDTSWT 677

Query: 284  ---------EYTCFARNKLG-TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVS 333
                      +   A NK+G +   S S        + D+  D  V  G   T    + S
Sbjct: 678  VQLSPWANYTFRVAAWNKIGPSTPSSHSDVCTTQPDVPDKNPDNVVGEGSDPTNMVISWS 737

Query: 334  D--------PSLKLSIVWLRG--SEPIDFESEPRFVQSNDYSLTVTKS---SELDSGQYT 380
                     P     + W R    +P   E + R  Q  DY +T T +    +L      
Sbjct: 738  KMPQIEHNGPGFYYLVSWRRNITGQPWS-EEQVRDWQQTDYVVTNTPTFVPYKLKVTAVN 796

Query: 381  CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
             +  + +  +E        +PL+AP NFTL+QV     A+++WNPV P+S+RGHF+GYK+
Sbjct: 797  YKGTSNVTPVEVLGWSGEDIPLQAPQNFTLVQVTTGTTALLNWNPVLPESVRGHFKGYKI 856

Query: 441  QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 500
            QTW + + E  ++E++V K ++++  V KF P  KN AR+L +NG +NGPPS+ +SF TP
Sbjct: 857  QTWVDGE-EDRLKEILV-KADASSALVSKFKPYKKNNARILVYNGRFNGPPSDTLSFHTP 914

Query: 501  EGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560
            EG PGTV+S E  P+GSSA  LKW KP   NGVL GYKI YQ V GT +GPL ER   I 
Sbjct: 915  EGKPGTVKSFEVYPIGSSAMLLKWDKPVDENGVLTGYKIYYQKVTGTSLGPLQERKKEI- 973

Query: 561  DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTP----- 615
            DP    AKLAGLEP+TKYRI +   TKAG+G +    +YV       V  +   P     
Sbjct: 974  DPKFDRAKLAGLEPNTKYRIEIRAKTKAGEGDK----YYVEQTTKTVVTAKPDIPLFETS 1029

Query: 616  --------NNLVISWTAMPEIE-HNAPHFKYRIFWRRHNTGEAWNQ-DDVLDWRQSELVL 665
                     ++++ W  +P +E H   HF   + W +      W + ++V D     ++L
Sbjct: 1030 TLPAKEGTAHILVRW--IPSLEGHAGTHF---VAWYKLKGHPDWTKTNEVTD--DDYVIL 1082

Query: 666  ANQPTFQPYEIKVVQTWTEKDGE 688
                  Q YE+++    T  DGE
Sbjct: 1083 TGLEPGQVYEVRL----TAHDGE 1101



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 174/692 (25%), Positives = 273/692 (39%), Gaps = 122/692 (17%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A + + V   C   G P P+I W  NG+ I  +    +   G   + I+     D G Y 
Sbjct: 260 ALKGKKVELYCIYGGTPLPQIVWKKNGRSILSSQGITQDNYG-KTLVIKYPTYEDQGTYT 318

Query: 197 CNATNSLGYVYK-DVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
           C  +N +G      + +N+ A AP  T  P+ +   +G++  + C   G P P++ WIHN
Sbjct: 319 CEVSNGVGTAQSYSILLNIEA-APFFTVEPEIQNLAEGESAEIKCEASGTPTPKITWIHN 377

Query: 256 -----QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTH 309
                Q E    R     T  + IT++   D+G Y C A + +G       + V+     
Sbjct: 378 GKPIEQAEPNPRRQVTANT--IVITNLVKKDTGNYGCNATSSIGYVYKDVYINVQSIPPE 435

Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
           I + PE+     G  A  +C     P  K  + W++  + +D  +  ++  + +  L + 
Sbjct: 436 IKEGPENLTRVDGSEAVLKCRVFGAP--KPLVKWMK--DDVDV-TGGKYNITPEGDLVIR 490

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQ---VPLEAPSNFTLIQVIDAKKAVVSWNPV 426
             S  D G Y C A+ +     A  +L V+   V  + P ++   +V     A    N  
Sbjct: 491 DVSYTDVGTYQCYAKNKFGEKSAFGSLDVKKRTVITDKPEHY---EVAAGSSATFRCNAN 547

Query: 427 SPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGE---STTTEVDK-----FVPASKNFA 478
           +  SL+   +   +    + D E   R  + N      S TTE+D          + + A
Sbjct: 548 ADDSLK--LQIIWLNDGQQIDFENQPRFRMTNDYSLLISDTTELDSGEYTCIARTAIDEA 605

Query: 479 RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
           R  A     + P   +I               E+I        L+W         ++ Y 
Sbjct: 606 RAQATLTVQDKPNPPVI---------------ESIECHEKTATLRWHSMGDNRAPILRYS 650

Query: 539 IKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF 598
           I+Y     T   P    L   + P   ++    L P   Y   +A + K G    S +  
Sbjct: 651 IQYN----TTFTPDTWDLASDNVPAIDTSWTVQLSPWANYTFRVAAWNKIGPSTPSSHSD 706

Query: 599 Y------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEA--- 649
                  VP KNPDNV G GS P N+VISW+ MP+IEHN P F Y + WRR+ TG+    
Sbjct: 707 VCTTQPDVPDKNPDNVVGEGSDPTNMVISWSKMPQIEHNGPGFYYLVSWRRNITGQPWSE 766

Query: 650 -----WNQDD-------------------------------VLDWRQSELVLANQPTFQP 673
                W Q D                               VL W   ++ L     F  
Sbjct: 767 EQVRDWQQTDYVVTNTPTFVPYKLKVTAVNYKGTSNVTPVEVLGWSGEDIPLQAPQNFTL 826

Query: 674 YEIKV------------------------VQTWTEKDGEGSIRELIVNKGESTTTEVDKF 709
            ++                          +QTW + + E  ++E++V K ++++  V KF
Sbjct: 827 VQVTTGTTALLNWNPVLPESVRGHFKGYKIQTWVDGE-EDRLKEILV-KADASSALVSKF 884

Query: 710 VPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
            P  KN AR+L +NG +NGPPS+ +SF TPEG
Sbjct: 885 KPYKKNNARILVYNGRFNGPPSDTLSFHTPEG 916



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 194/472 (41%), Gaps = 71/472 (15%)

Query: 14  RILLNVIATGISASQNRHAPKQQYVTRKKEVALR-------NKKVELFCIFGGTPLPQTI 66
           RIL  +     +A+     PK      ++E+  +       +K   + C   G P P+  
Sbjct: 5   RILCFIALISCAAALLTSPPKIVKQPTQEEILFQVAQPGEVDKPFIIECEAEGEPAPKYR 64

Query: 67  WSKDGVPINPS---DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVL 123
           W K+G P   +   +RISQ +   +L+I      D G Y C   N  G A S S+ +   
Sbjct: 65  WIKNGKPFEYTSYDNRISQQSGRGTLVISQPRDEDLGQYQCFAYNEWGTAASNSVFVRRA 124

Query: 124 AAPYF--TVEPEFINAAEEETVTFECK-ASGLPEPEIHWVHNG-----KPISQAPPNPRR 175
               F  T   + + A E +     C+   G P+P+++W+  G     K I+    N R 
Sbjct: 125 ELNSFKETDSQQVVVAEEGKPFKLTCEPPDGHPKPKVYWMLQGDQGQLKTIN----NSRM 180

Query: 176 KVGP---------NRITIENLRKSDTG---NYGCNATNSLGYVYK---DVYVNVLAHAPE 220
            + P          R+   N+ ++D      Y C A +     YK    +Y+ V      
Sbjct: 181 TLDPEGNLWFSNVTRLWFSNVTRNDASVNFAYICTANSIFRNEYKFGNKIYLQVTETGIA 240

Query: 221 IT---EAPKDEYT-------VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILET- 269
            T     P  +YT       + GK V L C   G P P++ W  N + +   +    +  
Sbjct: 241 STLNRHEPVRQYTTRKVEKALKGKKVELYCIYGGTPLPQIVWKKNGRSILSSQGITQDNY 300

Query: 270 -GDLKITDVAFADSGEYTCFARNKLGTAQG-SGSLTVKEHTHITDQPEDYEVEAGQSATF 327
              L I    + D G YTC   N +GTAQ  S  L ++     T +PE   +  G+SA  
Sbjct: 301 GKTLVIKYPTYEDQGTYTCEVSNGVGTAQSYSILLNIEAAPFFTVEPEIQNLAEGESAEI 360

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEP---RFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           +C A   P+ K  I W+   +PI+ ++EP   R V +N  ++ +T   + D+G Y C A 
Sbjct: 361 KCEASGTPTPK--ITWIHNGKPIE-QAEPNPRRQVTAN--TIVITNLVKKDTGNYGCNAT 415

Query: 385 TELDFIEAQATLTVQ-VP---LEAPSNFTLI---------QVIDAKKAVVSW 423
           + + ++     + VQ +P    E P N T +         +V  A K +V W
Sbjct: 416 SSIGYVYKDVYINVQSIPPEIKEGPENLTRVDGSEAVLKCRVFGAPKPLVKW 467


>gi|357609885|gb|EHJ66734.1| neuroglian [Danaus plexippus]
          Length = 1273

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 235/394 (59%), Positives = 289/394 (73%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           R+EYK+GN++ L V  TGIS + N+H P  QY TR+ E A R KKVEL+CI+GGTPLPQ 
Sbjct: 220 RNEYKLGNKVYLQVQQTGISPTSNKHQPVLQYATRRVEKAWRGKKVELYCIYGGTPLPQV 279

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +W K+G  I  S RI+Q NYGK+L+IK   + DQG+YTCEVSNGVG A++YSI L+V AA
Sbjct: 280 VWKKEGRTIISSQRITQDNYGKTLVIKRAGYEDQGTYTCEVSNGVGTAETYSIQLNVEAA 339

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P+F  EP+F N AE ET   +C+A G PEP I WVHNGKPI QA  NPRR+V  N ITI 
Sbjct: 340 PFFIEEPQFQNLAEGETAVIQCRAGGTPEPTISWVHNGKPIEQAENNPRRQVTANSITIT 399

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
           +L K DTGNYGCNATNS GYVYKDV++NV +  PEI E P +   V G T  L CRVFGA
Sbjct: 400 DLVKKDTGNYGCNATNSNGYVYKDVFINVQSIPPEIKEGPDNLTVVAGSTAALRCRVFGA 459

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           P+P V W+ +  ++TGG+Y I + GDL I DV+F D G Y C+A+NK G     GSLTVK
Sbjct: 460 PRPIVRWMRDDIDVTGGKYNITKEGDLVIADVSFTDVGTYQCYAKNKFGEKSAFGSLTVK 519

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           + T ITD+PE YEV AG SATFRCNA +D SLKL I+WL   +PIDF+++PRF  +NDYS
Sbjct: 520 KRTVITDKPEPYEVAAGSSATFRCNANADDSLKLDIIWLNDGQPIDFDNQPRFRITNDYS 579

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           L ++ +SELDSG+YTC A+T +D   AQATLTVQ
Sbjct: 580 LLISDTSELDSGEYTCIAKTAIDEARAQATLTVQ 613



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 135/301 (44%), Positives = 177/301 (58%), Gaps = 29/301 (9%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            PL+AP+NFTL+QV     A++SWNPV  +S+RGHF+GYK+QTW   DGE    + I+ K 
Sbjct: 816  PLQAPTNFTLVQVTTGTTALLSWNPVPAESVRGHFKGYKIQTWI--DGEEDRPKEILIKA 873

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
            ++++T V KF P  KN AR+L +NG +NGPPSE +SF TPEG PGTV+S EA P+GSSA 
Sbjct: 874  DASSTLVTKFKPFKKNNARILVYNGRFNGPPSETLSFNTPEGKPGTVRSFEAYPIGSSAM 933

Query: 521  YLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRI 580
             LKW KP   NG+L GYKI YQ V GT +GPL ER   I DP    AKLAGLEP+TKYRI
Sbjct: 934  LLKWDKPLDENGILTGYKIYYQKVTGTALGPLQERKKEI-DPKFDRAKLAGLEPNTKYRI 992

Query: 581  HLAGYTKAGDGAESKYLFY------------VPFKNPDNVEGRGSTPNNLVISWTAMPEI 628
             +   TKAG+G   KY               VP      +  +  T  ++++ W  +P +
Sbjct: 993  EIRAKTKAGEG--DKYYVEQTTRAMVTAVPDVPVFETSTLPAKEGTA-HILVRW--IPSL 1047

Query: 629  E-HNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDG 687
            E H   HF   I W R      W Q + +      ++   +P  + YE+KV    T  DG
Sbjct: 1048 EGHAGTHF---IAWYRLRGRPDWLQSNEVTEDDYVILTGLEPGLE-YEVKV----TAHDG 1099

Query: 688  E 688
            +
Sbjct: 1100 D 1100



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 158/589 (26%), Positives = 246/589 (41%), Gaps = 67/589 (11%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS---------DTG 193
           V   C   G P P++ W   G+ I          +   RIT +N  K+         D G
Sbjct: 265 VELYCIYGGTPLPQVVWKKEGRTI----------ISSQRITQDNYGKTLVIKRAGYEDQG 314

Query: 194 NYGCNATNSLGYVYK-DVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNW 252
            Y C  +N +G      + +NV A AP   E P+ +   +G+T V+ CR  G P+P ++W
Sbjct: 315 TYTCEVSNGVGTAETYSIQLNVEA-APFFIEEPQFQNLAEGETAVIQCRAGGTPEPTISW 373

Query: 253 IHNQKELTGGRYT---ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HT 308
           +HN K +          +    + ITD+   D+G Y C A N  G       + V+    
Sbjct: 374 VHNGKPIEQAENNPRRQVTANSITITDLVKKDTGNYGCNATNSNGYVYKDVFINVQSIPP 433

Query: 309 HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
            I + P++  V AG +A  RC     P  +  + W+R  + ID     ++  + +  L +
Sbjct: 434 EIKEGPDNLTVVAGSTAALRCRVFGAP--RPIVRWMR--DDIDVTGG-KYNITKEGDLVI 488

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQ---VPLEAPSNFTLIQVIDAKKAVVSWNP 425
              S  D G Y C A+ +     A  +LTV+   V  + P  +   +V     A    N 
Sbjct: 489 ADVSFTDVGTYQCYAKNKFGEKSAFGSLTVKKRTVITDKPEPY---EVAAGSSATFRCNA 545

Query: 426 VSPQSLRGHFRGYKVQTWTEKDGEGSIR------ELIVNKGESTTTEVDKFVPASKNFAR 479
            +  SL+            + D +   R       LI +  E  + E       + + AR
Sbjct: 546 NADDSLKLDIIWLNDGQPIDFDNQPRFRITNDYSLLISDTSELDSGEYTCIAKTAIDEAR 605

Query: 480 VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKI 539
             A     + P                  +LE I        L+W         ++ Y I
Sbjct: 606 AQATLTVQDKP---------------NPPALEGIECHERTATLRWHSMGDNRAPILRYSI 650

Query: 540 KYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY 599
           +Y     T   P    L   + P   ++    L P   Y   +    K G  A S +   
Sbjct: 651 QYN----TSFTPHAWDLASDNVPAIDTSWTVQLSPWANYTFRVTASNKIGASAPSSHSDV 706

Query: 600 ------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQD 653
                 VP+KNPDNVEG+G+ P N+VI+W+ MP+IEHN P F Y + W+R+ +G AW+++
Sbjct: 707 CTTQPDVPYKNPDNVEGKGTDPTNMVITWSKMPQIEHNGPGFYYLVSWKRNISGAAWSEE 766

Query: 654 DVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGEST 702
            V DW  +E V+ N PTF+PY+IKV+   ++     +  E+I   GE T
Sbjct: 767 QVRDWATTEYVIPNTPTFKPYKIKVIAVNSKGTSNVAPVEVIGWSGEDT 815



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 132/521 (25%), Positives = 215/521 (41%), Gaps = 60/521 (11%)

Query: 55  CIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           C  GGTP P   W  +G PI     NP  +++      S+ I  +   D G+Y C  +N 
Sbjct: 361 CRAGGTPEPTISWVHNGKPIEQAENNPRRQVT----ANSITITDLVKKDTGNYGCNATNS 416

Query: 110 VGEA-KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQ 168
            G   K   I++  +  P     P+ +      T    C+  G P P + W+ +   ++ 
Sbjct: 417 NGYVYKDVFINVQSIP-PEIKEGPDNLTVVAGSTAALRCRVFGAPRPIVRWMRDDIDVTG 475

Query: 169 APPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPEITEAPKD 227
              N  ++     + I ++  +D G Y C A N  G   K  + ++ +     IT+ P+ 
Sbjct: 476 GKYNITKE---GDLVIADVSFTDVGTYQCYAKNKFGE--KSAFGSLTVKKRTVITDKPEP 530

Query: 228 EYTVDGKTVVLTCRVFG--APKPEVNWIHNQKEL---TGGRYTILETGDLKITDVAFADS 282
                G +    C      + K ++ W+++ + +      R+ I     L I+D +  DS
Sbjct: 531 YEVAAGSSATFRCNANADDSLKLDIIWLNDGQPIDFDNQPRFRITNDYSLLISDTSELDS 590

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA----GQSATFRCNAVSD---P 335
           GEYTC A+  +  A+   +LTV+      D+P    +E      ++AT R +++ D   P
Sbjct: 591 GEYTCIAKTAIDEARAQATLTVQ------DKPNPPALEGIECHERTATLRWHSMGDNRAP 644

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA- 394
            L+ SI +     P  ++     V + D S TV  S   +   YT R  T  + I A A 
Sbjct: 645 ILRYSIQYNTSFTPHAWDLASDNVPAIDTSWTVQLSPWAN---YTFRV-TASNKIGASAP 700

Query: 395 -------TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
                  T    VP + P N    +  D    V++W+ + PQ        Y + +W    
Sbjct: 701 SSHSDVCTTQPDVPYKNPDNVEG-KGTDPTNMVITWSKM-PQIEHNGPGFYYLVSWKRNI 758

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFA-RVLAFN--GAYNGPPSEIISFV---TPE 501
              +  E  V +  +TT  V    P  K +  +V+A N  G  N  P E+I +    TP 
Sbjct: 759 SGAAWSEEQV-RDWATTEYVIPNTPTFKPYKIKVIAVNSKGTSNVAPVEVIGWSGEDTPL 817

Query: 502 GVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIK 540
             P T  +L  +  G++A  L W  V  E   G   GYKI+
Sbjct: 818 QAP-TNFTLVQVTTGTTAL-LSWNPVPAESVRGHFKGYKIQ 856



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 168/411 (40%), Gaps = 45/411 (10%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPS---DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVG 111
           C   G P P+  W K+G     +   +RISQ     +L++      D G Y C   N  G
Sbjct: 59  CEAEGEPAPKYRWIKNGKSFEYTSYDNRISQQPGRGTLVVSQPRNEDLGQYQCFAYNEWG 118

Query: 112 EAKSYSIDLSVLAAPYF--TVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKPIS 167
            A S S+ +       F  T  P+  I A E       C+   G P P ++W+  G+   
Sbjct: 119 TATSNSVFVRKAELNSFKETDGPQKTITAQEGLPFKLTCEPPDGHPSPNVYWMLQGEQGQ 178

Query: 168 -QAPPNPRRKVGP-NRITIENLRKSDTG---NYGCNATNSLGYVYK---DVYVNVL---- 215
            +   N R  + P   +   N+ + D      Y C A +     YK    VY+ V     
Sbjct: 179 LKTINNSRMTLDPEGNLWFSNVTRFDASVDYAYTCAAKSVFRNEYKLGNKVYLQVQQTGI 238

Query: 216 -----AHAPEITEAPKD-EYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE-LTGGRYTILE 268
                 H P +  A +  E    GK V L C   G P P+V W    +  ++  R T   
Sbjct: 239 SPTSNKHQPVLQYATRRVEKAWRGKKVELYCIYGGTPLPQVVWKKEGRTIISSQRITQDN 298

Query: 269 TGD-LKITDVAFADSGEYTCFARNKLGTAQG-SGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            G  L I    + D G YTC   N +GTA+  S  L V+      ++P+   +  G++A 
Sbjct: 299 YGKTLVIKRAGYEDQGTYTCEVSNGVGTAETYSIQLNVEAAPFFIEEPQFQNLAEGETAV 358

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPID-FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            +C A   P  + +I W+   +PI+  E+ PR  Q    S+T+T   + D+G Y C A  
Sbjct: 359 IQCRAGGTP--EPTISWVHNGKPIEQAENNPR-RQVTANSITITDLVKKDTGNYGCNATN 415

Query: 386 ELDFIEAQATLTVQ-VP---LEAPSNFTLI---------QVIDAKKAVVSW 423
              ++     + VQ +P    E P N T++         +V  A + +V W
Sbjct: 416 SNGYVYKDVFINVQSIPPEIKEGPDNLTVVAGSTAALRCRVFGAPRPIVRW 466



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 5/71 (7%)

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
           F+ Y+I   QTW   DGE    + I+ K ++++T V KF P  KN AR+L +NG +NGPP
Sbjct: 850 FKGYKI---QTWI--DGEEDRPKEILIKADASSTLVTKFKPFKKNNARILVYNGRFNGPP 904

Query: 731 SEIISFVTPEG 741
           SE +SF TPEG
Sbjct: 905 SETLSFNTPEG 915



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 113/294 (38%), Gaps = 38/294 (12%)

Query: 145 FECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR--ITIENLRKSDTGNYGCNATNS 202
            EC+A G P P+  W+ NGK       + R    P R  + +   R  D G Y C A N 
Sbjct: 57  IECEAEGEPAPKYRWIKNGKSFEYTSYDNRISQQPGRGTLVVSQPRNEDLGQYQCFAYNE 116

Query: 203 LGYVYKDVYVNVLAHAPEI-----TEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI-- 253
            G    +   +V     E+     T+ P+   T  +G    LTC    G P P V W+  
Sbjct: 117 WGTATSN---SVFVRKAELNSFKETDGPQKTITAQEGLPFKLTCEPPDGHPSPNVYWMLQ 173

Query: 254 ---HNQKELTGGRYTILETGDLKITDVAFADSG---EYTCFARN------KLGT-----A 296
                 K +   R T+   G+L  ++V   D+     YTC A++      KLG       
Sbjct: 174 GEQGQLKTINNSRMTLDPEGNLWFSNVTRFDASVDYAYTCAAKSVFRNEYKLGNKVYLQV 233

Query: 297 QGSG-SLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE 355
           Q +G S T  +H  +         +A +        +   +    +VW +    I   S 
Sbjct: 234 QQTGISPTSNKHQPVLQYATRRVEKAWRGKKVELYCIYGGTPLPQVVWKKEGRTII--SS 291

Query: 356 PRFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNF 408
            R  Q N   +L + ++   D G YTC     +   E   T ++Q+ +EA   F
Sbjct: 292 QRITQDNYGKTLVIKRAGYEDQGTYTCEVSNGVGTAE---TYSIQLNVEAAPFF 342


>gi|322796608|gb|EFZ19082.1| hypothetical protein SINV_16497 [Solenopsis invicta]
          Length = 472

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 230/323 (71%), Positives = 265/323 (82%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           R+EYK+GN++LLNVI+TG SA QN+H P++QYV+RK EVALR KKVEL+CIFGGTPLPQ 
Sbjct: 150 RNEYKVGNKVLLNVISTGASAGQNKHPPERQYVSRKNEVALRGKKVELYCIFGGTPLPQI 209

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +WSK+G  + PSDRI+QGNYGKSLIIKHV F D+G YTCE SNGVG A+SYSI L V+A 
Sbjct: 210 VWSKNGHLLKPSDRITQGNYGKSLIIKHVNFEDEGKYTCEASNGVGSAQSYSISLQVMAV 269

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PYFTVEPEF+NAAE+ETV   C+ASG+P PEI W+HNGKPIS+APPN RRKV PN I IE
Sbjct: 270 PYFTVEPEFVNAAEDETVEIRCEASGVPVPEIKWIHNGKPISEAPPNIRRKVTPNSIIIE 329

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
            L K DTGNYGCNATNSLGYVYKDVYVNVLA  P+IT+ P D  TVDGKT+ +TCRVFGA
Sbjct: 330 RLVKKDTGNYGCNATNSLGYVYKDVYVNVLALYPDITQPPTDLSTVDGKTIRITCRVFGA 389

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKPEV W+ N  ELTGGRY  L+ GDL+I +V F D+G YTC+A NK G    S SL VK
Sbjct: 390 PKPEVKWVRNGLELTGGRYKTLDVGDLEIENVIFLDAGIYTCYASNKFGKVNASASLIVK 449

Query: 306 EHTHITDQPEDYEVEAGQSATFR 328
           EHT ITD+PEDYEV AG +ATFR
Sbjct: 450 EHTKITDKPEDYEVAAGSTATFR 472



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 149/351 (42%), Gaps = 39/351 (11%)

Query: 78  DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFIN 136
           DRISQ     +L+I      D G Y C   N  G A S S+ +       F  E P  ++
Sbjct: 17  DRISQQPGRGTLVISRPRDEDLGQYQCFAENEWGIATSNSVFVRKAELNSFKDESPMTLS 76

Query: 137 AAEEETVTFECK-ASGLPEPEIHW-VHNGKPISQAPPNPRRKVGP-NRITIENLRKSDTG 193
           A E       C+   G P+P ++W + +     ++  N R  + P   +   N+ ++D  
Sbjct: 77  ANEGSPFKLTCQPPDGWPKPNVYWLIQDISGGIKSINNSRMTLDPEGNLWFSNVTRNDAS 136

Query: 194 N---YGCNATNSLGYVYK---DVYVNVLA---------HAPEITE-APKDEYTVDGKTVV 237
           +   Y C AT+     YK    V +NV++         H PE    + K+E  + GK V 
Sbjct: 137 DDFYYACAATSVFRNEYKVGNKVLLNVISTGASAGQNKHPPERQYVSRKNEVALRGKKVE 196

Query: 238 LTCRVFGAPKPEVNWIHN------QKELTGGRYTILETGDLKITDVAFADSGEYTCFARN 291
           L C   G P P++ W  N         +T G Y       L I  V F D G+YTC A N
Sbjct: 197 LYCIFGGTPLPQIVWSKNGHLLKPSDRITQGNY----GKSLIIKHVNFEDEGKYTCEASN 252

Query: 292 KLGTAQG-SGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPI 350
            +G+AQ  S SL V    + T +PE       ++   RC A   P  +  I W+   +PI
Sbjct: 253 GVGSAQSYSISLQVMAVPYFTVEPEFVNAAEDETVEIRCEASGVPVPE--IKWIHNGKPI 310

Query: 351 DFESEP---RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             E+ P   R V  N  S+ + +  + D+G Y C A   L ++     + V
Sbjct: 311 S-EAPPNIRRKVTPN--SIIIERLVKKDTGNYGCNATNSLGYVYKDVYVNV 358



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 112/268 (41%), Gaps = 12/268 (4%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + V   C   G P P+I W  NG  +  +    +   G + I I+++   D G Y 
Sbjct: 189 ALRGKKVELYCIFGGTPLPQIVWSKNGHLLKPSDRITQGNYGKSLI-IKHVNFEDEGKYT 247

Query: 197 CNATNSLGYVYK-DVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
           C A+N +G      + + V+A  P  T  P+     + +TV + C   G P PE+ WIHN
Sbjct: 248 CEASNGVGSAQSYSISLQVMA-VPYFTVEPEFVNAAEDETVEIRCEASGVPVPEIKWIHN 306

Query: 256 QKELTGGRYTI---LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHIT 311
            K ++     I   +    + I  +   D+G Y C A N LG       + V   +  IT
Sbjct: 307 GKPISEAPPNIRRKVTPNSIIIERLVKKDTGNYGCNATNSLGYVYKDVYVNVLALYPDIT 366

Query: 312 DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKS 371
             P D     G++    C     P  K  + W+R    +   +  R+   +   L +   
Sbjct: 367 QPPTDLSTVDGKTIRITCRVFGAP--KPEVKWVRNGLEL---TGGRYKTLDVGDLEIENV 421

Query: 372 SELDSGQYTCRAQTELDFIEAQATLTVQ 399
             LD+G YTC A  +   + A A+L V+
Sbjct: 422 IFLDAGIYTCYASNKFGKVNASASLIVK 449


>gi|195565779|ref|XP_002106476.1| GD16907 [Drosophila simulans]
 gi|194203852|gb|EDX17428.1| GD16907 [Drosophila simulans]
          Length = 601

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 222/378 (58%), Positives = 280/378 (74%), Gaps = 18/378 (4%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           RSEYKIGN++LL+V   G+SASQN+H P +QYV+R++ +ALR K++ELFCI+GGTPLPQT
Sbjct: 219 RSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQT 278

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           +WSKDG  I  SDRI+QG+YGKSL+I+   F D G+YTC+VSNGVG A+S+SI L+    
Sbjct: 279 VWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIILN---- 334

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
                         +E V FEC+A+G+PEP+I W+HNGKPI Q+ PNPRR V  N I I 
Sbjct: 335 --------------DEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNPRRTVTDNTIRII 380

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
           NL K DTGNYGCNATNSLGYVYKDVY+NV A  P I+EAP    TVDG+ V + CRV G+
Sbjct: 381 NLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVDGRNVTIKCRVNGS 440

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           PKP V W+     LTGGRY +   GDL+I DV F+D+G+YTC+A+NK G  Q  GSL VK
Sbjct: 441 PKPLVKWLRASNWLTGGRYNVQANGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVK 500

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           EHT IT +P++YEV AGQSATFRCN   D +L++ I W +  + IDFE++PRFV++ND S
Sbjct: 501 EHTRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSIDFEAQPRFVKTNDNS 560

Query: 366 LTVTKSSELDSGQYTCRA 383
           LT+ K+ ELDSG+YT  A
Sbjct: 561 LTIAKTMELDSGEYTGSA 578



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 114/259 (44%), Gaps = 32/259 (12%)

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV 206
           C   G P P+  W  +G+ I  +    +   G + + I      D G Y C+ +N +G  
Sbjct: 268 CIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKS-LVIRQTNFDDAGTYTCDVSNGVG-- 324

Query: 207 YKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG---- 262
                            A      ++ + VV  CR  G P+P+++WIHN K +       
Sbjct: 325 ----------------NAQSFSIILNDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNP 368

Query: 263 RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK-EHTHITDQPEDYEVEA 321
           R T+ +   ++I ++   D+G Y C A N LG       L V+ E   I++ P       
Sbjct: 369 RRTVTDN-TIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVD 427

Query: 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF-VQSNDYSLTVTKSSELDSGQYT 380
           G++ T +C     P  K  + WLR S   ++ +  R+ VQ+N   L +   +  D+G+YT
Sbjct: 428 GRNVTIKCRVNGSP--KPLVKWLRAS---NWLTGGRYNVQANG-DLEIQDVTFSDAGKYT 481

Query: 381 CRAQTELDFIEAQATLTVQ 399
           C AQ +   I+A  +L V+
Sbjct: 482 CYAQNKFGEIQADGSLVVK 500



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 98/398 (24%), Positives = 161/398 (40%), Gaps = 69/398 (17%)

Query: 43  EVALRNKKVE----LFCIFGGTPLPQTIWSKDGVPIN---PSDRISQGNYGKSLIIKHVE 95
           +VA +NK+ +    + C   G P P+  W K+G   +     +R+ +     +L+I   +
Sbjct: 43  KVAQQNKESDNPFIIECEADGQPEPEYSWIKNGKKFDWQAYDNRMLRQPGRGTLVITIPK 102

Query: 96  FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECKA-SGLP 153
             D+G Y C  SN  G A S S+ +       F  E  + + A E E    +C A  G P
Sbjct: 103 DEDRGHYQCFASNEFGTATSNSVYVRKAELNAFKDEAAKTLEAVEGEPFMLKCAAPDGFP 162

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--------NLRKSDTGN---YGCNATNS 202
            P ++W+     I ++     + +  +R+T++        N+ + D  +   Y C+AT+ 
Sbjct: 163 SPTVNWM-----IQESIDGSIKSINNSRMTLDPEGNLWFSNVTREDASSDFYYACSATSV 217

Query: 203 LGYVYK---DVYVNVL---AHAPEITEAPKDEY-------TVDGKTVVLTCRVFGAPKPE 249
               YK    V ++V      A +    P  +Y        + GK + L C   G P P+
Sbjct: 218 FRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQ 277

Query: 250 VNW------IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLT 303
             W      I     +T G Y       L I    F D+G YTC   N +G AQ S S+ 
Sbjct: 278 TVWSKDGQRIQWSDRITQGHY----GKSLVIRQTNFDDAGTYTCDVSNGVGNAQ-SFSII 332

Query: 304 VKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFES-EPRFVQSN 362
           + +                +   F C A   P  K+S  W+   +PI+  +  PR   + 
Sbjct: 333 LND----------------EEVVFECRAAGVPEPKIS--WIHNGKPIEQSTPNPRRTVT- 373

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           D ++ +    + D+G Y C A   L ++     L VQ 
Sbjct: 374 DNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQA 411


>gi|427797289|gb|JAA64096.1| Putative neural cell adhesion molecule l1, partial [Rhipicephalus
           pulchellus]
          Length = 1331

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 226/439 (51%), Positives = 296/439 (67%), Gaps = 11/439 (2%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           R EYKIGN+I L V  T  SA +  HAP +QY++    VALR  +++L+CI+GGTPLPQ 
Sbjct: 193 RREYKIGNKIQLKVEPTS-SAGKAEHAPVKQYLSPPNLVALRGHELKLYCIYGGTPLPQI 251

Query: 66  IWSKDGVPINP-SDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA 124
            WSK G   NP S R +  NYGK+L I+ V F D+G+Y C+ +NGVG A+++++ + V A
Sbjct: 252 SWSKRGA--NPTSRRFTYSNYGKTLEIRSVSFEDEGTYECQANNGVGVAQTHAMHVKVEA 309

Query: 125 APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
           APY+   P+  NAAEEE+V+FEC A+G+PEP++ W  NG P+ +A PNPRRKV    +TI
Sbjct: 310 APYWLRVPDNTNAAEEESVSFECAATGIPEPKLQWFVNGVPVEKAEPNPRRKVEGPLLTI 369

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKD-EYTVDGKTVVLTCRVF 243
           E L K DT  Y CNA+N  GY ++D Y+NVLA  P ITEAP+     V    V L CRVF
Sbjct: 370 EALTKRDTAVYQCNASNPHGYAFRDFYLNVLALPPTITEAPEQLTLAVVTSRVTLRCRVF 429

Query: 244 GAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLT 303
           GAP+PEV W+   +ELTGGRY +L++GDL+I D+   D GEYTC+A NK G A  SGSL 
Sbjct: 430 GAPRPEVKWMKEAQELTGGRYRVLDSGDLQIDDLLVTDQGEYTCYASNKFGDASASGSLE 489

Query: 304 VKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSND 363
           VK  T IT  PE+YEV A +SATFRCNA +DPSL+L I WL   +P+D E++ R VQ+ D
Sbjct: 490 VKGKTLITQPPENYEVAADKSATFRCNAEADPSLELKIEWLFNGQPVDPEADARMVQAGD 549

Query: 364 YSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQV-IDAKKAVVS 422
            SLT+T++ ELDSG YTC A+TELD   AQATLTVQ   + P+   ++++  D   A+V 
Sbjct: 550 NSLTITRTIELDSGIYTCVARTELDSDRAQATLTVQ---DVPNPPQMVKIDCDGLMALVE 606

Query: 423 WNPVSPQSLRGHFRGYKVQ 441
           W P   +  R     Y +Q
Sbjct: 607 WKPTGDR--RAPILSYSIQ 623



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 119/338 (35%), Positives = 170/338 (50%), Gaps = 67/338 (19%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVN- 458
            VPL AP +F L  V+DA+ A  +W+PVSP+S+RGHFRGYK+QTWT  +GE  +RE++V  
Sbjct: 839  VPLAAPQDFKLANVVDARTANFTWSPVSPESVRGHFRGYKIQTWTPDEGEEKLREVVVPA 898

Query: 459  --------------------------------------------KGESTTTEVDKFVPAS 474
                                                            TT  V  F P S
Sbjct: 899  NVTTATVSLFRPFSRNLVHVLVFNDMYNGPPSDSIEFSTPEGVPXANVTTATVSLFRPFS 958

Query: 475  KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
            +N   VL FN  YNGPPS+ I F TPEGVPG V S E IP+GS+  YL W +P + NGVL
Sbjct: 959  RNLVHVLVFNDMYNGPPSDSIEFSTPEGVPGPVASFEGIPMGSTGIYLLWKRPLETNGVL 1018

Query: 535  MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
             GY I Y+ V+GT++GP +ER P + DP  + AKLAGL+P TKYRI +   T  G G  +
Sbjct: 1019 TGYHIYYEEVRGTQLGPKMERQPPVRDPLESRAKLAGLKPRTKYRITIHAATAQGQGDPN 1078

Query: 595  KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNA-------------PHFKYRIFW 641
                ++  +  D  E     P+    +W  +P+ + +A             P   + + +
Sbjct: 1079 ----FIELETADESERVPDMPD---FTWAYLPDRDGHAAVQVTWLPAMAGHPGSHFYVQY 1131

Query: 642  RRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVV 679
            RR    E W +  +++  +  +++    T   YE++V+
Sbjct: 1132 RRKG-DETW-ETTMVEKNEDNILVKGLETGALYEMRVI 1167



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 154/595 (25%), Positives = 235/595 (39%), Gaps = 54/595 (9%)

Query: 130 VEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIEN 186
           + P  + A     +   C   G P P+I W   G     A P  RR    N    + I +
Sbjct: 224 LSPPNLVALRGHELKLYCIYGGTPLPQISWSKRG-----ANPTSRRFTYSNYGKTLEIRS 278

Query: 187 LRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAP 246
           +   D G Y C A N +G          +  AP     P +    + ++V   C   G P
Sbjct: 279 VSFEDEGTYECQANNGVGVAQTHAMHVKVEAAPYWLRVPDNTNAAEEESVSFECAATGIP 338

Query: 247 KPEVNWIHN----QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL 302
           +P++ W  N    +K     R  + E   L I  +   D+  Y C A N  G A     L
Sbjct: 339 EPKLQWFVNGVPVEKAEPNPRRKV-EGPLLTIEALTKRDTAVYQCNASNPHGYAFRDFYL 397

Query: 303 TVKE-HTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQ 360
            V      IT+ PE   +    S  T RC     P  +  + W++ ++ +      R + 
Sbjct: 398 NVLALPPTITEAPEQLTLAVVTSRVTLRCRVFGAP--RPEVKWMKEAQELT-GGRYRVLD 454

Query: 361 SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ---VPLEAPSNFTLIQVIDAK 417
           S D  L +      D G+YTC A  +     A  +L V+   +  + P N+   +V   K
Sbjct: 455 SGD--LQIDDLLVTDQGEYTCYASNKFGDASASGSLEVKGKTLITQPPENY---EVAADK 509

Query: 418 KAVVSWNPVSPQSLRGH----FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPA 473
            A    N  +  SL       F G  V      D E   R  +V  G+++ T + + +  
Sbjct: 510 SATFRCNAEADPSLELKIEWLFNGQPV------DPEADAR--MVQAGDNSLT-ITRTIEL 560

Query: 474 SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV 533
                  +A     +       + +T + VP   Q ++    G  A  ++W         
Sbjct: 561 DSGIYTCVARTELDS---DRAQATLTVQDVPNPPQMVKIDCDGLMAL-VEWKPTGDRRAP 616

Query: 534 LMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG---- 589
           ++ Y I+Y     T   P      +++ P   +     + P   Y   +    K G    
Sbjct: 617 ILSYSIQYN----TSFSPDTWEDAFVNIPAPDTKFKVSMSPWANYTFRVVARNKIGPSLP 672

Query: 590 DGAESKYLF--YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTG 647
            GA S+      VP KNPD V GRG   +NL+I+WT MP IEHNAP F Y++ W+R +  
Sbjct: 673 SGASSRCTTPEDVPHKNPDRVMGRGDRFDNLLITWTPMPPIEHNAPGFFYKVLWKRDDIP 732

Query: 648 EA-WNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGES 701
           +A WN   + DW+Q+  V   QPTF+PY IKV           +  E+I   GE+
Sbjct: 733 DATWNSRIIEDWKQNRHVEYGQPTFKPYRIKVEAHNRRGQAHTAATEVIGYSGEN 787



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 187/482 (38%), Gaps = 80/482 (16%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDGVP---INPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           +K   L C   G P P   W+K+      ++   RISQ     +L+    +  D+G Y C
Sbjct: 27  DKPFLLECEAQGHPEPTYEWTKNNKEFDYVSYDKRISQQPRRGTLVFTKPDDVDEGLYQC 86

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET----------VTFECK-ASGLP 153
             +N  G + S ++         F  + E  N AEE T          ++ +C   +G P
Sbjct: 87  RATNLHGTSVSNAV---------FLRKAELNNFAEETTKEVYVVEGDPLSLDCNPPTGYP 137

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIE-----NLRKSDTGN------YGCNATNS 202
            P I W      + Q      R V  +RIT +     +  + + G+      Y C+AT+ 
Sbjct: 138 RPNIFW------LIQYSSGALRNVNSSRITADPEGDLHFSRVELGDALSDAVYTCSATSV 191

Query: 203 LGYVYK-----DVYVNVLAHAPEITEAPKDEY-------TVDGKTVVLTCRVFGAPKPEV 250
               YK      + V   + A +   AP  +Y        + G  + L C   G P P++
Sbjct: 192 FRREYKIGNKIQLKVEPTSSAGKAEHAPVKQYLSPPNLVALRGHELKLYCIYGGTPLPQI 251

Query: 251 NWIHNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSG-SLTVKEHT 308
           +W       T  R+T    G  L+I  V+F D G Y C A N +G AQ     + V+   
Sbjct: 252 SWSKRGANPTSRRFTYSNYGKTLEIRSVSFEDEGTYECQANNGVGVAQTHAMHVKVEAAP 311

Query: 309 HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID-FESEPRFVQSNDYSLT 367
           +    P++      +S +F C A   P  KL   W     P++  E  PR  +     LT
Sbjct: 312 YWLRVPDNTNAAEEESVSFECAATGIPEPKLQ--WFVNGVPVEKAEPNPR-RKVEGPLLT 368

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTV-QVP---LEAPSNFTL----------IQV 413
           +   ++ D+  Y C A     +      L V  +P    EAP   TL           +V
Sbjct: 369 IEALTKRDTAVYQCNASNPHGYAFRDFYLNVLALPPTITEAPEQLTLAVVTSRVTLRCRV 428

Query: 414 IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVP 472
             A +  V W   + +   G +R           G+  I +L+V ++GE T    +KF  
Sbjct: 429 FGAPRPEVKWMKEAQELTGGRYR-------VLDSGDLQIDDLLVTDQGEYTCYASNKFGD 481

Query: 473 AS 474
           AS
Sbjct: 482 AS 483



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 39/63 (61%), Gaps = 1/63 (1%)

Query: 679 VQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           +QTWT  +GE  +RE++V     TT  V  F P S+N   VL FN  YNGPPS+ I F T
Sbjct: 879 IQTWTPDEGEEKLREVVV-PANVTTATVSLFRPFSRNLVHVLVFNDMYNGPPSDSIEFST 937

Query: 739 PEG 741
           PEG
Sbjct: 938 PEG 940



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 25/40 (62%)

Query: 702 TTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
           TT  V  F P S+N   VL FN  YNGPPS+ I F TPEG
Sbjct: 947 TTATVSLFRPFSRNLVHVLVFNDMYNGPPSDSIEFSTPEG 986


>gi|427792699|gb|JAA61801.1| hypothetical protein, partial [Rhipicephalus pulchellus]
          Length = 1314

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 226/439 (51%), Positives = 296/439 (67%), Gaps = 11/439 (2%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           R EYKIGN+I L V  T  SA +  HAP +QY++    VALR  +++L+CI+GGTPLPQ 
Sbjct: 273 RREYKIGNKIQLKVEPTS-SAGKAEHAPVKQYLSPPNLVALRGHELKLYCIYGGTPLPQI 331

Query: 66  IWSKDGVPINP-SDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA 124
            WSK G   NP S R +  NYGK+L I+ V F D+G+Y C+ +NGVG A+++++ + V A
Sbjct: 332 SWSKRGA--NPTSRRFTYSNYGKTLEIRSVSFEDEGTYECQANNGVGVAQTHAMHVKVEA 389

Query: 125 APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
           APY+   P+  NAAEEE+V+FEC A+G+PEP++ W  NG P+ +A PNPRRKV    +TI
Sbjct: 390 APYWLRVPDNTNAAEEESVSFECAATGIPEPKLQWFVNGVPVEKAEPNPRRKVEGPLLTI 449

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKD-EYTVDGKTVVLTCRVF 243
           E L K DT  Y CNA+N  GY ++D Y+NVLA  P ITEAP+     V    V L CRVF
Sbjct: 450 EALTKRDTAVYQCNASNPHGYAFRDFYLNVLALPPTITEAPEQLTLAVVTSRVTLRCRVF 509

Query: 244 GAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLT 303
           GAP+PEV W+   +ELTGGRY +L++GDL+I D+   D GEYTC+A NK G A  SGSL 
Sbjct: 510 GAPRPEVKWMKEAQELTGGRYRVLDSGDLQIDDLLVTDQGEYTCYASNKFGDASASGSLE 569

Query: 304 VKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSND 363
           VK  T IT  PE+YEV A +SATFRCNA +DPSL+L I WL   +P+D E++ R VQ+ D
Sbjct: 570 VKGKTLITQPPENYEVAADKSATFRCNAEADPSLELKIEWLFNGQPVDPEADARMVQAGD 629

Query: 364 YSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQV-IDAKKAVVS 422
            SLT+T++ ELDSG YTC A+TELD   AQATLTVQ   + P+   ++++  D   A+V 
Sbjct: 630 NSLTITRTIELDSGIYTCVARTELDSDRAQATLTVQ---DVPNPPQMVKIDCDGLMALVE 686

Query: 423 WNPVSPQSLRGHFRGYKVQ 441
           W P   +  R     Y +Q
Sbjct: 687 WKPTGDR--RAPILSYSIQ 703



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 213/713 (29%), Positives = 321/713 (45%), Gaps = 89/713 (12%)

Query: 17   LNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINP 76
            LNV+A   + ++   AP+Q        +A+   +V L C   G P P+  W K+      
Sbjct: 477  LNVLALPPTITE---APEQL------TLAVVTSRVTLRCRVFGAPRPEVKWMKE------ 521

Query: 77   SDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP 132
            +  ++ G Y       L I  +  +DQG YTC  SN  G+A S S  L V      T  P
Sbjct: 522  AQELTGGRYRVLDSGDLQIDDLLVTDQGEYTCYASNKFGDA-SASGSLEVKGKTLITQPP 580

Query: 133  EFINAAEEETVTFECKASGLP--EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
            E    A +++ TF C A   P  E +I W+ NG+P+         + G N +TI    + 
Sbjct: 581  ENYEVAADKSATFRCNAEADPSLELKIEWLFNGQPVDPEADARMVQAGDNSLTITRTIEL 640

Query: 191  DTGNYGCNATNSLGYVYKDVYVNV--LAHAPEITEAPKDEYTVDGKTVVLTCRVFG---A 245
            D+G Y C A   L        + V  + + P++ +        DG   ++  +  G   A
Sbjct: 641  DSGIYTCVARTELDSDRAQATLTVQDVPNPPQMVK-----IDCDGLMALVEWKPTGDRRA 695

Query: 246  PKPEVNWIHNQK---ELTGGRYTILETGDLKITDVAFADSGEYT--CFARNKLGTAQGSG 300
            P    +  +N     +     +  +   D K   V+ +    YT    ARNK+G +  SG
Sbjct: 696  PILSYSIQYNTSFSPDTWEDAFVNIPAPDTKFK-VSMSPWANYTFRVVARNKIGPSLPSG 754

Query: 301  SLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD---------------PSLKLSIVWLR 345
            +      +     PED   +       R +   +               P     ++W R
Sbjct: 755  A------SSRCTTPEDVPHKNPDRVMGRGDRFDNLLITWTPMPPIEHNAPGFFYKVLWKR 808

Query: 346  GSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
               P D     R ++        +Y     K   +    +  R Q      E        
Sbjct: 809  DDIP-DATWNSRIIEDWKQNRHVEYGQPTFKPYRIKVEAHNRRGQAHTAATEVIGYSGEN 867

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VPL AP +F L  V+DA+ A  +W+PVSP+S+RGHFRGYK+QTWT  +GE  +RE++V  
Sbjct: 868  VPLAAPQDFKLANVVDARTANFTWSPVSPESVRGHFRGYKIQTWTPDEGEEKLREVVV-P 926

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
               TT  V  F P S+N   VL FN  YNGPPS+ I F TPEGVPG V S E IP+GS+ 
Sbjct: 927  ANVTTATVSLFRPFSRNLVHVLVFNDMYNGPPSDSIEFSTPEGVPGPVASFEGIPMGSTG 986

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYR 579
             YL W +P + NGVL GY I Y+ V+GT++GP +ER P + DP  + AKLAGL+P TKYR
Sbjct: 987  IYLLWKRPLETNGVLTGYHIYYEEVRGTQLGPKMERQPPVRDPLESRAKLAGLKPRTKYR 1046

Query: 580  IHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNA------- 632
            I +   T  G G  +    ++  +  D  E     P+    +W  +P+ + +A       
Sbjct: 1047 ITIHAATAQGQGDPN----FIELETADESERVPDMPD---FTWAYLPDRDGHAAVQVTWL 1099

Query: 633  ------PHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVV 679
                  P   + + +RR    E W +  +++  +  +++    T   YE++V+
Sbjct: 1100 PAMAGHPGSHFYVQYRRKGD-ETW-ETTMVEKNEDNILVKGLETGALYEMRVI 1150



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 178/699 (25%), Positives = 264/699 (37%), Gaps = 120/699 (17%)

Query: 130 VEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIEN 186
           + P  + A     +   C   G P P+I W   G     A P  RR    N    + I +
Sbjct: 304 LSPPNLVALRGHELKLYCIYGGTPLPQISWSKRG-----ANPTSRRFTYSNYGKTLEIRS 358

Query: 187 LRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAP 246
           +   D G Y C A N +G          +  AP     P +    + ++V   C   G P
Sbjct: 359 VSFEDEGTYECQANNGVGVAQTHAMHVKVEAAPYWLRVPDNTNAAEEESVSFECAATGIP 418

Query: 247 KPEVNWIHN----QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL 302
           +P++ W  N    +K     R  + E   L I  +   D+  Y C A N  G A     L
Sbjct: 419 EPKLQWFVNGVPVEKAEPNPRRKV-EGPLLTIEALTKRDTAVYQCNASNPHGYAFRDFYL 477

Query: 303 TVKE-HTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQ 360
            V      IT+ PE   +    S  T RC     P  +  + W++ ++ +      R + 
Sbjct: 478 NVLALPPTITEAPEQLTLAVVTSRVTLRCRVFGAP--RPEVKWMKEAQELT-GGRYRVLD 534

Query: 361 SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ---VPLEAPSNFTLIQVIDAK 417
           S D  L +      D G+YTC A  +     A  +L V+   +  + P N+   +V   K
Sbjct: 535 SGD--LQIDDLLVTDQGEYTCYASNKFGDASASGSLEVKGKTLITQPPENY---EVAADK 589

Query: 418 KAVVSWNPVSPQSLRGH----FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPA 473
            A    N  +  SL       F G  V      D E   R  +V  G+++ T + + +  
Sbjct: 590 SATFRCNAEADPSLELKIEWLFNGQPV------DPEADAR--MVQAGDNSLT-ITRTIEL 640

Query: 474 SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV 533
                  +A     +       + +T + VP   Q ++    G  A  ++W         
Sbjct: 641 DSGIYTCVARTELDS---DRAQATLTVQDVPNPPQMVKIDCDGLMAL-VEWKPTGDRRAP 696

Query: 534 LMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG---- 589
           ++ Y I+Y     T   P      +++ P   +     + P   Y   +    K G    
Sbjct: 697 ILSYSIQYN----TSFSPDTWEDAFVNIPAPDTKFKVSMSPWANYTFRVVARNKIGPSLP 752

Query: 590 DGAESKYLF--YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTG 647
            GA S+      VP KNPD V GRG   +NL+I+WT MP IEHNAP F Y++ W+R +  
Sbjct: 753 SGASSRCTTPEDVPHKNPDRVMGRGDRFDNLLITWTPMPPIEHNAPGFFYKVLWKRDDIP 812

Query: 648 EA-WNQDDVLDWRQSELVLANQPTFQPYEIKVVQ-------------------------- 680
           +A WN   + DW+Q+  V   QPTF+PY IKV                            
Sbjct: 813 DATWNSRIIEDWKQNRHVEYGQPTFKPYRIKVEAHNRRGQAHTAATEVIGYSGENVPLAA 872

Query: 681 -----------------TWTEKDGEG--------SIRELIVNKGESTTTEVDKFVPAS-- 713
                            TW+    E          I+    ++GE    EV   VPA+  
Sbjct: 873 PQDFKLANVVDARTANFTWSPVSPESVRGHFRGYKIQTWTPDEGEEKLREV--VVPANVT 930

Query: 714 -------KNFARVL----AFNGAYNGPPSEIISFVTPEG 741
                  + F+R L     FN  YNGPPS+ I F TPEG
Sbjct: 931 TATVSLFRPFSRNLVHVLVFNDMYNGPPSDSIEFSTPEG 969



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 187/482 (38%), Gaps = 80/482 (16%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDGVP---INPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           +K   L C   G P P   W+K+      ++   RISQ     +L+    +  D+G Y C
Sbjct: 107 DKPFLLECEAQGHPEPTYEWTKNNKEFDYVSYDKRISQQPRRGTLVFTKPDDVDEGLYQC 166

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET----------VTFECK-ASGLP 153
             +N  G + S ++         F  + E  N AEE T          ++ +C   +G P
Sbjct: 167 RATNLHGTSVSNAV---------FLRKAELNNFAEETTKEVYVVEGDPLSLDCNPPTGYP 217

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIE-----NLRKSDTGN------YGCNATNS 202
            P I W      + Q      R V  +RIT +     +  + + G+      Y C+AT+ 
Sbjct: 218 RPNIFW------LIQYSSGALRNVNSSRITADPEGDLHFSRVELGDALSDAVYTCSATSV 271

Query: 203 LGYVYK-----DVYVNVLAHAPEITEAPKDEY-------TVDGKTVVLTCRVFGAPKPEV 250
               YK      + V   + A +   AP  +Y        + G  + L C   G P P++
Sbjct: 272 FRREYKIGNKIQLKVEPTSSAGKAEHAPVKQYLSPPNLVALRGHELKLYCIYGGTPLPQI 331

Query: 251 NWIHNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSG-SLTVKEHT 308
           +W       T  R+T    G  L+I  V+F D G Y C A N +G AQ     + V+   
Sbjct: 332 SWSKRGANPTSRRFTYSNYGKTLEIRSVSFEDEGTYECQANNGVGVAQTHAMHVKVEAAP 391

Query: 309 HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID-FESEPRFVQSNDYSLT 367
           +    P++      +S +F C A   P  KL   W     P++  E  PR  +     LT
Sbjct: 392 YWLRVPDNTNAAEEESVSFECAATGIPEPKLQ--WFVNGVPVEKAEPNPR-RKVEGPLLT 448

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTV-QVP---LEAPSNFTL----------IQV 413
           +   ++ D+  Y C A     +      L V  +P    EAP   TL           +V
Sbjct: 449 IEALTKRDTAVYQCNASNPHGYAFRDFYLNVLALPPTITEAPEQLTLAVVTSRVTLRCRV 508

Query: 414 IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVP 472
             A +  V W   + +   G +R           G+  I +L+V ++GE T    +KF  
Sbjct: 509 FGAPRPEVKWMKEAQELTGGRYR-------VLDSGDLQIDDLLVTDQGEYTCYASNKFGD 561

Query: 473 AS 474
           AS
Sbjct: 562 AS 563


>gi|391347861|ref|XP_003748172.1| PREDICTED: LOW QUALITY PROTEIN: neuroglian-like [Metaseiulus
           occidentalis]
          Length = 1257

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 229/510 (44%), Positives = 305/510 (59%), Gaps = 28/510 (5%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           R EYKIGN+++L V     S  +    P  QY +  ++  LR K+ EL CIFGGTPLPQ 
Sbjct: 215 RREYKIGNKVVLKVEPKS-STGKTEVPPVHQYTSGPQQDPLRGKRHELHCIFGGTPLPQI 273

Query: 66  IWSKDGVP-INPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA 124
            W+K G   +  S+R+   NYGK+L+IK  +F D+G Y C  SNGVG  KS+S+++ + A
Sbjct: 274 RWTKKGTSSLENSNRVETVNYGKTLVIKSPDFEDEGVYECTASNGVGPPKSHSMNVKIKA 333

Query: 125 APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
           APY+   PE  +AAEEETVTFEC A+G+PEP++ W  NG PI +AP +PRRK+  N +TI
Sbjct: 334 APYWVKAPEKKDAAEEETVTFECNATGVPEPKLQWFVNGMPIEKAPASPRRKLQGNFLTI 393

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKD-EYTVDGKTVVLTCRVF 243
           E L K DT  + CNA+N LGY +KD Y+NVLA  P I EAP+     V G T +L CRVF
Sbjct: 394 ERLEKKDTAVFQCNASNPLGYAFKDFYLNVLALPPSIIEAPEQVTQAVVGSTAILKCRVF 453

Query: 244 GAPKPEVNWIHNQ-------KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTA 296
           GAPKP V WI          +ELTGGRY +L++GDL+I +V   D+GEYTC A NK G  
Sbjct: 454 GAPKPTVKWIKTNAHSITGGRELTGGRYKVLDSGDLQINEVLVTDNGEYTCQASNKFGDT 513

Query: 297 QGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
             SG+L VKE               G+SA FRCNA +DP+L L+I WL   E IDFE +P
Sbjct: 514 SASGTLDVKE----------LXGGRGESAVFRCNAQADPTLDLTINWLFNDELIDFERDP 563

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQV-ID 415
           R ++++D SLT+T++ ELDSG+YTC A+TELD   A ATLTVQ   + P++ ++++V  D
Sbjct: 564 RMIKASDNSLTITRTLELDSGRYTCVAKTELDKDTASATLTVQ---DVPNSPSIVKVTCD 620

Query: 416 AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
              A+V W P   +  R     Y +Q +       +  +   N     T       P + 
Sbjct: 621 QYTALVEWKPNGDR--RAPILSYTIQ-YNTSFAPDTWEDAFANIPAPDTRFKVSMSPWAN 677

Query: 476 NFARVLAFNGAYNGPPSEI-ISFVTPEGVP 504
              RV+A N     PPSE  +   T E +P
Sbjct: 678 YTFRVIARNKIGPSPPSETSMRCTTAESIP 707



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 94/228 (41%), Positives = 125/228 (54%), Gaps = 2/228 (0%)

Query: 364  YSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSW 423
            Y + V K   +    +  R       +E         P E P  F ++ V D K A + W
Sbjct: 777  YGMPVFKPYRIKVEAHNRRGAAHTHAVEVIGYSGEDKPSEVPQEFRVVGVPDGKTAELRW 836

Query: 424  NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAF 483
             PVSP+S+ GHF+GYK+QTWT ++G+  +REL+V   + T      F P + N+ +V  F
Sbjct: 837  RPVSPESVNGHFKGYKIQTWTNEEGKDKMRELVVPSNQ-THAVAKIFKPNTMNYVQVRVF 895

Query: 484  NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQS 543
            N  +    SE  SF TPEG PG V S +  P+GSS  YL W KP +PNG L GY I Y+ 
Sbjct: 896  NEQHESDESETRSFETPEGTPGPVASFDGFPMGSSGIYLIWRKPLEPNGRLTGYHISYEE 955

Query: 544  VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            V+GT +G  +ER P I+DP  T AKLA L  +TKYRI +   T  G G
Sbjct: 956  VRGTTLGAAVERSP-INDPLETRAKLANLRSNTKYRITIKAATLKGKG 1002



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 151/601 (25%), Positives = 235/601 (39%), Gaps = 83/601 (13%)

Query: 145 FECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNATN 201
             C   G P P+I W   G   + +  N  R    N    + I++    D G Y C A+N
Sbjct: 261 LHCIFGGTPLPQIRWTKKG---TSSLENSNRVETVNYGKTLVIKSPDFEDEGVYECTASN 317

Query: 202 SLGYVYKDVYVNV-LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN----Q 256
            +G   K   +NV +  AP   +AP+ +   + +TV   C   G P+P++ W  N    +
Sbjct: 318 GVGPP-KSHSMNVKIKAAPYWVKAPEKKDAAEEETVTFECNATGVPEPKLQWFVNGMPIE 376

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
           K     R   L+   L I  +   D+  + C A N LG A     L V      I + PE
Sbjct: 377 KAPASPRRK-LQGNFLTIERLEKKDTAVFQCNASNPLGYAFKDFYLNVLALPPSIIEAPE 435

Query: 316 DY-EVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
              +   G +A  +C     P  K ++ W++               +N +S  +T   EL
Sbjct: 436 QVTQAVVGSTAILKCRVFGAP--KPTVKWIK---------------TNAHS--ITGGREL 476

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNF---TLIQVIDAKKAVVSWNPVSPQSL 431
             G+Y      +L   E   T   +   +A + F   +    +D K+             
Sbjct: 477 TGGRYKVLDSGDLQINEVLVTDNGEYTCQASNKFGDTSASGTLDVKELXGG--------- 527

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD-KFVPASKN---FARVLAFN-GA 486
           RG    ++     +   + +I  L  +  E    E D + + AS N     R L  + G 
Sbjct: 528 RGESAVFRCNAQADPTLDLTINWLFND--ELIDFERDPRMIKASDNSLTITRTLELDSGR 585

Query: 487 YNGPPSEII------SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG----VLMG 536
           Y       +      + +T + VP +  S+  +        ++W    +PNG     ++ 
Sbjct: 586 YTCVAKTELDKDTASATLTVQDVPNS-PSIVKVTCDQYTALVEW----KPNGDRRAPILS 640

Query: 537 YKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY 596
           Y I+Y     T   P      + + P   +     + P   Y   +    K G    S+ 
Sbjct: 641 YTIQYN----TSFAPDTWEDAFANIPAPDTRFKVSMSPWANYTFRVIARNKIGPSPPSET 696

Query: 597 LFY------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT---- 646
                    +P KNPD V GRG+  +NLVISWT MP IEHNAP F YR+ ++R +T    
Sbjct: 697 SMRCTTAESIPHKNPDKVAGRGTQKDNLVISWTPMPPIEHNAPGFFYRVKYKRKDTENTA 756

Query: 647 -GEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTE 705
              +W  +D+ DWRQ  +     P F+PY IKV              E+I   GE   +E
Sbjct: 757 DESSWITEDIQDWRQGSIAKYGMPVFKPYRIKVEAHNRRGAAHTHAVEVIGYSGEDKPSE 816

Query: 706 V 706
           V
Sbjct: 817 V 817



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 115/465 (24%), Positives = 186/465 (40%), Gaps = 45/465 (9%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDGVP---INPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           +K   L C   GTP P+  W K+G     ++   RIS+     +LI    +  D+G Y C
Sbjct: 49  DKPFVLECEAEGTPEPEYEWIKNGRVFDYVSYDKRISKQPKRGTLIFTKPDDVDEGLYQC 108

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHW-VH 161
           + +N  G + S ++ L       F  +  + I   E E ++ +CK   G P P + W + 
Sbjct: 109 KATNQYGTSVSNAVFLRKSELSNFADDKTQEIFVMEGEPLSLDCKPPQGYPAPSVFWLIQ 168

Query: 162 NGKPISQAPPNPRRKVGP-NRITIENLRKSDT---GNYGCNATNSLGYVYKDVYVNVLAH 217
           +G    ++  + R    P  ++    + ++D+     Y C+AT+     YK     VL  
Sbjct: 169 SGNGALRSFNSSRITADPEGKLHFSQVLRADSLADAVYTCSATSHFRREYKIGNKVVLKV 228

Query: 218 APEITEA-----PKDEYT-------VDGKTVVLTCRVFGAPKPEVNWIH---NQKELTGG 262
            P+ +       P  +YT       + GK   L C   G P P++ W     +  E +  
Sbjct: 229 EPKSSTGKTEVPPVHQYTSGPQQDPLRGKRHELHCIFGGTPLPQIRWTKKGTSSLENSNR 288

Query: 263 RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG-SGSLTVKEHTHITDQPEDYEVEA 321
             T+     L I    F D G Y C A N +G  +  S ++ +K   +    PE  +   
Sbjct: 289 VETVNYGKTLVIKSPDFEDEGVYECTASNGVGPPKSHSMNVKIKAAPYWVKAPEKKDAAE 348

Query: 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPID-FESEPRFVQSNDYSLTVTKSSELDSGQYT 380
            ++ TF CNA   P  KL   W     PI+   + PR     ++ LT+ +  + D+  + 
Sbjct: 349 EETVTFECNATGVPEPKLQ--WFVNGMPIEKAPASPRRKLQGNF-LTIERLEKKDTAVFQ 405

Query: 381 CRAQTELDFIEAQATLTV-QVP---LEAPSNFTL----------IQVIDAKKAVVSWNPV 426
           C A   L +      L V  +P   +EAP   T            +V  A K  V W   
Sbjct: 406 CNASNPLGYAFKDFYLNVLALPPSIIEAPEQVTQAVVGSTAILKCRVFGAPKPTVKWIKT 465

Query: 427 SPQSLRGHFRGYKVQTWTEKDGEGSIRE-LIVNKGESTTTEVDKF 470
           +  S+ G       +      G+  I E L+ + GE T    +KF
Sbjct: 466 NAHSITGGRELTGGRYKVLDSGDLQINEVLVTDNGEYTCQASNKF 510



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 4/71 (5%)

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
           F+ Y+I   QTWT ++G+  +REL+V   + T      F P + N+ +V  FN  +    
Sbjct: 848 FKGYKI---QTWTNEEGKDKMRELVVPSNQ-THAVAKIFKPNTMNYVQVRVFNEQHESDE 903

Query: 731 SEIISFVTPEG 741
           SE  SF TPEG
Sbjct: 904 SETRSFETPEG 914


>gi|241631838|ref|XP_002410294.1| neuronal cell adhesion molecule, putative [Ixodes scapularis]
 gi|215503376|gb|EEC12870.1| neuronal cell adhesion molecule, putative [Ixodes scapularis]
          Length = 1224

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 213/438 (48%), Positives = 284/438 (64%), Gaps = 19/438 (4%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           R EYKIGN+I L V     SA +  HAP +QY++    VAL+ ++++L+CIFGG+PLPQ 
Sbjct: 212 RREYKIGNKIQLRVEPVS-SAGKAEHAPIKQYLSPPNLVALKGQELKLYCIFGGSPLPQI 270

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
            WSK G     S R +  NYGK+L I+ V F D+G+Y C+ +NGVG A+S+++++ V +A
Sbjct: 271 SWSKRGSSAA-SSRFTYTNYGKTLEIRSVGFEDEGTYECQANNGVGVAQSHAMNVKVESA 329

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           PY+   PE  NAAEEE+V+FEC ASG+PEP++ W  NG P+  A  NPRRKV    +T+E
Sbjct: 330 PYWLRSPENTNAAEEESVSFECSASGIPEPKLQWFVNGVPLQNAEANPRRKVEGPLLTLE 389

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKD-EYTVDGKTVVLTCRVFG 244
           +L K DT  Y CNA+N  GY +KD Y+NVLA  P I EAP+     V      L CRVFG
Sbjct: 390 SLTKRDTAVYQCNASNPHGYAFKDFYLNVLALPPSIVEAPEPLTLAVVTSRATLRCRVFG 449

Query: 245 APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTV 304
           AP+PEV W+   +ELTGGRY +L++GDL+I D+   D GEYTC+A NK G A  SG+L V
Sbjct: 450 APRPEVKWMKETQELTGGRYKVLDSGDLQIDDLLVTDQGEYTCYASNKFGDASASGALEV 509

Query: 305 KEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDY 364
           KE               GQSATFR NA +DPSL+L I WL   E +D +++ R VQ++D 
Sbjct: 510 KE----------LRGGGGQSATFRYNAEADPSLELRISWLFNGELVDPDADARMVQASDN 559

Query: 365 SLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQV-IDAKKAVVSW 423
           SLT+T++ ELDSG YTC AQT+LD  +AQATLTVQ   + P+   +++V  D   A+V W
Sbjct: 560 SLTITRTIELDSGVYTCLAQTDLDGDKAQATLTVQ---DVPNPPQMVRVECDTLMALVEW 616

Query: 424 NPVSPQSLRGHFRGYKVQ 441
            P   +  R     Y +Q
Sbjct: 617 KPTGDR--RAPILSYSIQ 632



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 190/631 (30%), Positives = 279/631 (44%), Gaps = 73/631 (11%)

Query: 44   VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEFSDQ 99
            +A+   +  L C   G P P+  W K+      +  ++ G Y       L I  +  +DQ
Sbjct: 434  LAVVTSRATLRCRVFGAPRPEVKWMKE------TQELTGGRYKVLDSGDLQIDDLLVTDQ 487

Query: 100  GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP--EPEI 157
            G YTC  SN  G+A +              +E + +     ++ TF   A   P  E  I
Sbjct: 488  GEYTCYASNKFGDASASG-----------ALEVKELRGGGGQSATFRYNAEADPSLELRI 536

Query: 158  HWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLG--YVYKDVYVNVL 215
             W+ NG+ +         +   N +TI    + D+G Y C A   L        + V  +
Sbjct: 537  SWLFNGELVDPDADARMVQASDNSLTITRTIELDSGVYTCLAQTDLDGDKAQATLTVQDV 596

Query: 216  AHAPEITEAPKDEY--------TVDGKTVVLTCRV-FGAPKPEVNWIHNQKELTGGRYTI 266
             + P++     D          T D +  +L+  + +        W           +  
Sbjct: 597  PNPPQMVRVECDTLMALVEWKPTGDRRAPILSYSIQYNTSFSPDTW--------EDAFVN 648

Query: 267  LETGDLKITDVAFADSGEYT--CFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
            +   D K   V+ +    YT    ARNK+G +  SG+      +     PED   +    
Sbjct: 649  IPAPDTKFK-VSMSPWANYTFRVVARNKIGPSLPSGA------SSRCTTPEDVPHKNPDK 701

Query: 325  ATFRCNAVSDPSLKLSIVWLRGSEP--------IDFESEPRFVQSNDYSLTVTKSSELDS 376
                    + P     + W R   P        ID   + R V+   Y     K   +  
Sbjct: 702  VPMPPIEQNAPGFFYKVFWKRNDLPDAAWNSKIIDDWKQNRHVE---YGQPTFKPYRIKV 758

Query: 377  GQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR 436
              +  R Q     ++        VPL +P +F L  V+DA+ A  SW+PVSP+S+RGHFR
Sbjct: 759  EAHNRRGQAHTVAMDVMGWSGEDVPLLSPQDFKLANVVDARSANFSWSPVSPESVRGHFR 818

Query: 437  GYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS 496
            GYK+QTWT ++GE  +RE++V     TT  V  F P S+N    L FN  YNGPPS+ I 
Sbjct: 819  GYKIQTWTPEEGEEKLREVVV-PANVTTALVTLFKPYSRNLVHALVFNDMYNGPPSDSIE 877

Query: 497  FVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERL 556
            F TPEG PG V S E IP+GS+  YL W KP + NG+L GY I Y+ V+GT++GP +ER 
Sbjct: 878  FSTPEGTPGPVASFEGIPMGSTGVYLLWKKPLESNGILTGYHIYYEEVRGTQLGPKMERQ 937

Query: 557  PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPN 616
            P + DP  + AKLAGL+P+TKYRI L   T+ G G      +++     D  E     P+
Sbjct: 938  PPVRDPLESRAKLAGLKPNTKYRITLQAATRQGQGDP----YFIELSTADESERVPDIPD 993

Query: 617  NLVISWTAMPEIEHNAPHFKYRIFWRRHNTG 647
             L   WT +P  +H+  H   ++ W    TG
Sbjct: 994  FL---WTYLP--DHDG-HAAVQVTWLPAVTG 1018



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 156/709 (22%), Positives = 249/709 (35%), Gaps = 165/709 (23%)

Query: 130 VEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRK 189
           + P  + A + + +   C   G P P+I W   G   + +           R T  N  K
Sbjct: 243 LSPPNLVALKGQELKLYCIFGGSPLPQISWSKRGSSAASS-----------RFTYTNYGK 291

Query: 190 S---------DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC 240
           +         D G Y C A N +G          +  AP    +P++    + ++V   C
Sbjct: 292 TLEIRSVGFEDEGTYECQANNGVGVAQSHAMNVKVESAPYWLRSPENTNAAEEESVSFEC 351

Query: 241 RVFGAPKPEVNWIHNQKELTGGRYT---ILETGDLKITDVAFADSGEYTCFARNKLGTAQ 297
              G P+P++ W  N   L          +E   L +  +   D+  Y C A N  G A 
Sbjct: 352 SASGIPEPKLQWFVNGVPLQNAEANPRRKVEGPLLTLESLTKRDTAVYQCNASNPHGYAF 411

Query: 298 GSGSLTVKE-HTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEPIDFESE 355
               L V      I + PE   +    S AT RC     P  +  + W++ ++ +   + 
Sbjct: 412 KDFYLNVLALPPSIVEAPEPLTLAVVTSRATLRCRVFGAP--RPEVKWMKETQEL---TG 466

Query: 356 PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVID 415
            R+   +   L +      D G+YTC A  +     A   L V+           ++   
Sbjct: 467 GRYKVLDSGDLQIDDLLVTDQGEYTCYASNKFGDASASGALEVKE----------LRGGG 516

Query: 416 AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD-KFVPAS 474
            + A   +N                    E D    +R   +  GE    + D + V AS
Sbjct: 517 GQSATFRYN-------------------AEADPSLELRISWLFNGELVDPDADARMVQAS 557

Query: 475 KN---FARVLAFN-GAY--------NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYL 522
            N     R +  + G Y        +G  ++  + +T + VP   Q +  +   +    +
Sbjct: 558 DNSLTITRTIELDSGVYTCLAQTDLDGDKAQ--ATLTVQDVPNPPQMVR-VECDTLMALV 614

Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
           +W         ++ Y I+Y     T   P      +++ P   +     + P   Y   +
Sbjct: 615 EWKPTGDRRAPILSYSIQYN----TSFSPDTWEDAFVNIPAPDTKFKVSMSPWANYTFRV 670

Query: 583 AGYTKAG----DGAESKYLF--YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
               K G     GA S+      VP KNPD V                MP IE NAP F 
Sbjct: 671 VARNKIGPSLPSGASSRCTTPEDVPHKNPDKV---------------PMPPIEQNAPGFF 715

Query: 637 YRIFWRRHNTGEA---------WNQD-------------------------------DVL 656
           Y++FW+R++  +A         W Q+                               DV+
Sbjct: 716 YKVFWKRNDLPDAAWNSKIIDDWKQNRHVEYGQPTFKPYRIKVEAHNRRGQAHTVAMDVM 775

Query: 657 DWRQSELVLANQPTFQ------------------PYEIK------VVQTWTEKDGEGSIR 692
            W   ++ L +   F+                  P  ++       +QTWT ++GE  +R
Sbjct: 776 GWSGEDVPLLSPQDFKLANVVDARSANFSWSPVSPESVRGHFRGYKIQTWTPEEGEEKLR 835

Query: 693 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
           E++V     TT  V  F P S+N    L FN  YNGPPS+ I F TPEG
Sbjct: 836 EVVV-PANVTTALVTLFKPYSRNLVHALVFNDMYNGPPSDSIEFSTPEG 883



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 195/477 (40%), Gaps = 62/477 (12%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDGVP---INPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           +K   L C   G P P+  W+K+      ++   RISQ     +LI    +  D+G Y C
Sbjct: 46  DKPFLLECEAQGNPEPEYKWTKNNNEFDYVSYDKRISQQPRRGTLIFTKPDDVDEGLYQC 105

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVHN 162
             SN  G + S S+ L       F  E  + +   E + ++ +C   +G P P I W   
Sbjct: 106 FASNLHGTSVSNSVFLRKSELNSFAEESTKEVYVVEGDPLSLDCNPPTGYPRPNIFW--- 162

Query: 163 GKPISQAPPNPRRKVGPNRITIE-----NLRKSDTGN------YGCNATNSLGYVYK--- 208
              + Q      R V  +RIT +     +  + + G+      Y C+AT+     YK   
Sbjct: 163 ---LIQYSSGALRNVNSSRITADPEGDLHFSRVERGDALADAVYTCSATSVFRREYKIGN 219

Query: 209 --DVYVNVLAHAPEITEAPKDEY-------TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL 259
              + V  ++ A +   AP  +Y        + G+ + L C   G+P P+++W       
Sbjct: 220 KIQLRVEPVSSAGKAEHAPIKQYLSPPNLVALKGQELKLYCIFGGSPLPQISWSKRGSSA 279

Query: 260 TGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSG-SLTVKEHTHITDQPEDY 317
              R+T    G  L+I  V F D G Y C A N +G AQ    ++ V+   +    PE+ 
Sbjct: 280 ASSRFTYTNYGKTLEIRSVGFEDEGTYECQANNGVGVAQSHAMNVKVESAPYWLRSPENT 339

Query: 318 EVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPI-DFESEPRFVQSNDYSLTVTKSSELDS 376
                +S +F C+A   P  KL   W     P+ + E+ PR  +     LT+   ++ D+
Sbjct: 340 NAAEEESVSFECSASGIPEPKLQ--WFVNGVPLQNAEANPR-RKVEGPLLTLESLTKRDT 396

Query: 377 GQYTCRAQTELDFIEAQATLTV-QVP---LEAPSNFTL----------IQVIDAKKAVVS 422
             Y C A     +      L V  +P   +EAP   TL           +V  A +  V 
Sbjct: 397 AVYQCNASNPHGYAFKDFYLNVLALPPSIVEAPEPLTLAVVTSRATLRCRVFGAPRPEVK 456

Query: 423 WNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFA 478
           W   + +   G    YKV       G+  I +L+V ++GE T    +KF  AS + A
Sbjct: 457 WMKETQELTGGR---YKVL----DSGDLQIDDLLVTDQGEYTCYASNKFGDASASGA 506


>gi|427797293|gb|JAA64098.1| Putative neural cell adhesion molecule l1, partial [Rhipicephalus
           pulchellus]
          Length = 1345

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 222/499 (44%), Positives = 291/499 (58%), Gaps = 71/499 (14%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           R EYKIGN+I L V  T  SA +  HAP +QY++    VALR  +++L+CI+GGTPLPQ 
Sbjct: 193 RREYKIGNKIQLKVEPTS-SAGKAEHAPVKQYLSPPNLVALRGHELKLYCIYGGTPLPQI 251

Query: 66  IWSKDGVPINP-SDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA 124
            WSK G   NP S R +  NYGK+L I+ V F D+G+Y C+ +NGVG A+++++ + V A
Sbjct: 252 SWSKRGA--NPTSRRFTYSNYGKTLEIRSVSFEDEGTYECQANNGVGVAQTHAMHVKVEA 309

Query: 125 APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
           APY+   P+  NAAEEE+V+FEC A+G+PEP++ W  NG P+ +A PNPRRKV    +TI
Sbjct: 310 APYWLRVPDNTNAAEEESVSFECAATGIPEPKLQWFVNGVPVEKAEPNPRRKVEGPLLTI 369

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKD-EYTVDGKTVVLTCRVF 243
           E L K DT  Y CNA+N  GY ++D Y+NVLA  P ITEAP+     V    V L CRVF
Sbjct: 370 EALTKRDTAVYQCNASNPHGYAFRDFYLNVLALPPTITEAPEQLTLAVVTSRVTLRCRVF 429

Query: 244 GAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLT 303
           GAP+PEV W+   +ELTGGRY +L++GDL+I D+   D GEYTC+A NK G A  SGSL 
Sbjct: 430 GAPRPEVKWMKEAQELTGGRYRVLDSGDLQIDDLLVTDQGEYTCYASNKFGDASASGSLE 489

Query: 304 VKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS-- 361
           VK  T IT  PE+YEV A +SATFRCNA +DPSL+L I WL   +P+D E++ R   S  
Sbjct: 490 VKGKTLITQPPENYEVAADKSATFRCNAEADPSLELKIEWLFNGQPVDPEADARMXGSLE 549

Query: 362 -----------------NDYSLTVTKSSELD-----------SGQ--------------- 378
                             D S T   ++E D           +GQ               
Sbjct: 550 VKGKTLITQPPENYEVAADKSATFRCNAEADPSLELKIEWLFNGQPVDPEADARMVQAGD 609

Query: 379 ---------------YTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQV-IDAKKAVVS 422
                          YTC A+TELD   AQATLTVQ   + P+   ++++  D   A+V 
Sbjct: 610 NSLTITRTIELDSGIYTCVARTELDSDRAQATLTVQ---DVPNPPQMVKIDCDGLMALVE 666

Query: 423 WNPVSPQSLRGHFRGYKVQ 441
           W P   +  R     Y +Q
Sbjct: 667 WKPTGDR--RAPILSYSIQ 683



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 119/293 (40%), Positives = 170/293 (58%), Gaps = 23/293 (7%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VPL AP +F L  V+DA+ A  +W+PVSP+S+RGHFRGYK+QTWT  +GE  +RE++V  
Sbjct: 899  VPLAAPQDFKLANVVDARTANFTWSPVSPESVRGHFRGYKIQTWTPDEGEEKLREVVV-P 957

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
               TT  V  F P S+N   VL FN  YNGPPS+ I F TPEGVPG V S E IP+GS+ 
Sbjct: 958  ANVTTATVSLFRPFSRNLVHVLVFNDMYNGPPSDSIEFSTPEGVPGPVASFEGIPMGSTG 1017

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYR 579
             YL W +P + NGVL GY I Y+ V+GT++GP +ER P + DP  + AKLAGL+P TKYR
Sbjct: 1018 IYLLWKRPLETNGVLTGYHIYYEEVRGTQLGPKMERQPPVRDPLESRAKLAGLKPRTKYR 1077

Query: 580  IHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNA------- 632
            I +   T  G G  +    ++  +  D  E     P+    +W  +P+ + +A       
Sbjct: 1078 ITIHAATAQGQGDPN----FIELETADESERVPDMPD---FTWAYLPDRDGHAAVQVTWL 1130

Query: 633  ------PHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVV 679
                  P   + + +RR    E W +  +++  +  +++    T   YE++V+
Sbjct: 1131 PAMAGHPGSHFYVQYRRKGD-ETW-ETTMVEKNEDNILVKGLETGALYEMRVI 1181



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 162/643 (25%), Positives = 240/643 (37%), Gaps = 90/643 (13%)

Query: 130 VEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIEN 186
           + P  + A     +   C   G P P+I W   G     A P  RR    N    + I +
Sbjct: 224 LSPPNLVALRGHELKLYCIYGGTPLPQISWSKRG-----ANPTSRRFTYSNYGKTLEIRS 278

Query: 187 LRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAP 246
           +   D G Y C A N +G          +  AP     P +    + ++V   C   G P
Sbjct: 279 VSFEDEGTYECQANNGVGVAQTHAMHVKVEAAPYWLRVPDNTNAAEEESVSFECAATGIP 338

Query: 247 KPEVNWIHN----QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL 302
           +P++ W  N    +K     R  + E   L I  +   D+  Y C A N  G A     L
Sbjct: 339 EPKLQWFVNGVPVEKAEPNPRRKV-EGPLLTIEALTKRDTAVYQCNASNPHGYAFRDFYL 397

Query: 303 TVKE-HTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQ 360
            V      IT+ PE   +    S  T RC     P  +  + W++ ++ +      R + 
Sbjct: 398 NVLALPPTITEAPEQLTLAVVTSRVTLRCRVFGAP--RPEVKWMKEAQELT-GGRYRVLD 454

Query: 361 SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ---VPLEAPSNFTLIQVIDAK 417
           S D  L +      D G+YTC A  +     A  +L V+   +  + P N+   +V   K
Sbjct: 455 SGD--LQIDDLLVTDQGEYTCYASNKFGDASASGSLEVKGKTLITQPPENY---EVAADK 509

Query: 418 KAVVSWNPVSPQSLRGH----FRGYKVQTWTEKDGEGSI----RELIVNKGESTTTEVDK 469
            A    N  +  SL       F G  V    +    GS+    + LI    E+     DK
Sbjct: 510 SATFRCNAEADPSLELKIEWLFNGQPVDPEADARMXGSLEVKGKTLITQPPENYEVAADK 569

Query: 470 FVP----ASKNFARVLAFNGAYNGPP--------------------------SEIISFV- 498
                  A  + +  L     +NG P                          S I + V 
Sbjct: 570 SATFRCNAEADPSLELKIEWLFNGQPVDPEADARMVQAGDNSLTITRTIELDSGIYTCVA 629

Query: 499 -------------TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVK 545
                        T + VP   Q ++    G  A  ++W         ++ Y I+Y    
Sbjct: 630 RTELDSDRAQATLTVQDVPNPPQMVKIDCDGLMAL-VEWKPTGDRRAPILSYSIQYN--- 685

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG----DGAESKYLF--Y 599
            T   P      +++ P   +     + P   Y   +    K G     GA S+      
Sbjct: 686 -TSFSPDTWEDAFVNIPAPDTKFKVSMSPWANYTFRVVARNKIGPSLPSGASSRCTTPED 744

Query: 600 VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEA-WNQDDVLDW 658
           VP KNPD V GRG   +NL+I+WT MP IEHNAP F Y++ W+R +  +A WN   + DW
Sbjct: 745 VPHKNPDRVMGRGDRFDNLLITWTPMPPIEHNAPGFFYKVLWKRDDIPDATWNSRIIEDW 804

Query: 659 RQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGES 701
           +Q+  V   QPTF+PY IKV           +  E+I   GE+
Sbjct: 805 KQNRHVEYGQPTFKPYRIKVEAHNRRGQAHTAATEVIGYSGEN 847



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 187/482 (38%), Gaps = 80/482 (16%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDGVP---INPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           +K   L C   G P P   W+K+      ++   RISQ     +L+    +  D+G Y C
Sbjct: 27  DKPFLLECEAQGHPEPTYEWTKNNKEFDYVSYDKRISQQPRRGTLVFTKPDDVDEGLYQC 86

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET----------VTFECK-ASGLP 153
             +N  G + S ++         F  + E  N AEE T          ++ +C   +G P
Sbjct: 87  RATNLHGTSVSNAV---------FLRKAELNNFAEETTKEVYVVEGDPLSLDCNPPTGYP 137

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIE-----NLRKSDTGN------YGCNATNS 202
            P I W      + Q      R V  +RIT +     +  + + G+      Y C+AT+ 
Sbjct: 138 RPNIFW------LIQYSSGALRNVNSSRITADPEGDLHFSRVELGDALSDAVYTCSATSV 191

Query: 203 LGYVYK-----DVYVNVLAHAPEITEAPKDEY-------TVDGKTVVLTCRVFGAPKPEV 250
               YK      + V   + A +   AP  +Y        + G  + L C   G P P++
Sbjct: 192 FRREYKIGNKIQLKVEPTSSAGKAEHAPVKQYLSPPNLVALRGHELKLYCIYGGTPLPQI 251

Query: 251 NWIHNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSG-SLTVKEHT 308
           +W       T  R+T    G  L+I  V+F D G Y C A N +G AQ     + V+   
Sbjct: 252 SWSKRGANPTSRRFTYSNYGKTLEIRSVSFEDEGTYECQANNGVGVAQTHAMHVKVEAAP 311

Query: 309 HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID-FESEPRFVQSNDYSLT 367
           +    P++      +S +F C A   P  KL   W     P++  E  PR  +     LT
Sbjct: 312 YWLRVPDNTNAAEEESVSFECAATGIPEPKLQ--WFVNGVPVEKAEPNPR-RKVEGPLLT 368

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTV-QVP---LEAPSNFTL----------IQV 413
           +   ++ D+  Y C A     +      L V  +P    EAP   TL           +V
Sbjct: 369 IEALTKRDTAVYQCNASNPHGYAFRDFYLNVLALPPTITEAPEQLTLAVVTSRVTLRCRV 428

Query: 414 IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVP 472
             A +  V W   + +   G +R           G+  I +L+V ++GE T    +KF  
Sbjct: 429 FGAPRPEVKWMKEAQELTGGRYR-------VLDSGDLQIDDLLVTDQGEYTCYASNKFGD 481

Query: 473 AS 474
           AS
Sbjct: 482 AS 483



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 39/63 (61%), Gaps = 1/63 (1%)

Query: 679  VQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
            +QTWT  +GE  +RE++V     TT  V  F P S+N   VL FN  YNGPPS+ I F T
Sbjct: 939  IQTWTPDEGEEKLREVVV-PANVTTATVSLFRPFSRNLVHVLVFNDMYNGPPSDSIEFST 997

Query: 739  PEG 741
            PEG
Sbjct: 998  PEG 1000


>gi|85682963|gb|ABC73457.1| CG1634 [Drosophila miranda]
          Length = 349

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 166/285 (58%), Positives = 201/285 (70%), Gaps = 2/285 (0%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
           E V F+C+A+G PEP+I W+HNGKPI Q+ PNPRR V  N I I NL KSDTGNYGCNAT
Sbjct: 1   EEVVFQCEAAGFPEPKISWIHNGKPIEQSTPNPRRTVTDNTIRIVNLVKSDTGNYGCNAT 60

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT 260
           NSLGYVYKDV++NV A  PEI E P    TVDG+ V L CRV GAPKP+V W+     LT
Sbjct: 61  NSLGYVYKDVFLNVQALPPEIEEPPTALSTVDGRNVTLRCRVTGAPKPQVRWLRATNWLT 120

Query: 261 GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
           GGRY +   GDL+I DV F+D+G+YTC+A NK G     GSLTV EHT IT +P++YEV 
Sbjct: 121 GGRYIVQANGDLQILDVTFSDAGQYTCYAENKFGNKSAEGSLTVMEHTRITQEPQNYEVA 180

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
           AGQSATFRCN   D +L++ I W +  +PIDFE++PRFV++ND SLT+ K+ ELDSG+YT
Sbjct: 181 AGQSATFRCNEAHDGNLEIEIDWWKDGQPIDFEAQPRFVKTNDNSLTIAKTMELDSGEYT 240

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           C A+T LD   A+A L VQ    AP   T I    A KA + W P
Sbjct: 241 CVARTRLDEATAKANLIVQDVPNAPK-LTGI-TCQADKAEIMWEP 283



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 143/346 (41%), Gaps = 43/346 (12%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           ++V   C   G P P+  W  +G PI     NP   ++      ++ I ++  SD G+Y 
Sbjct: 1   EEVVFQCEAAGFPEPKISWIHNGKPIEQSTPNPRRTVTD----NTIRIVNLVKSDTGNYG 56

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECKASGLPEPEIHWVH- 161
           C  +N +G      + L+V A P    EP   ++  +   VT  C+ +G P+P++ W+  
Sbjct: 57  CNATNSLGYVYK-DVFLNVQALPPEIEEPPTALSTVDGRNVTLRCRVTGAPKPQVRWLRA 115

Query: 162 -----NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
                 G+ I QA  +         + I ++  SD G Y C A N  G    +  + V+ 
Sbjct: 116 TNWLTGGRYIVQANGD---------LQILDVTFSDAGQYTCYAENKFGNKSAEGSLTVME 166

Query: 217 HAPEITEAPKDEYTVDGKTVVLTCRVF--GAPKPEVNWIHNQKEL---TGGRYTILETGD 271
           H   IT+ P++     G++    C     G  + E++W  + + +      R+       
Sbjct: 167 HT-RITQEPQNYEVAAGQSATFRCNEAHDGNLEIEIDWWKDGQPIDFEAQPRFVKTNDNS 225

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE------HTHITDQPEDYEVEAGQSA 325
           L I      DSGEYTC AR +L  A    +L V++       T IT Q +  E+      
Sbjct: 226 LTIAKTMELDSGEYTCVARTRLDEATAKANLIVQDVPNAPKLTGITCQADKAEIMWEPQG 285

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKS 371
             R      P L  +I +     P  +++    V + D+S  V  S
Sbjct: 286 DNR-----SPILHYTIQFNTSFTPASWDTAFEKVPNTDFSFVVQMS 326


>gi|443706398|gb|ELU02465.1| hypothetical protein CAPTEDRAFT_220777 [Capitella teleta]
          Length = 1327

 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 150/389 (38%), Positives = 225/389 (57%), Gaps = 9/389 (2%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VALR +   + C+F G+P P+  W + G  + PS R  Q ++G+ L+I+ V+F D G Y 
Sbjct: 247 VALRGQTWRIKCVFSGSPTPRVDWDRVGEAM-PS-RSRQESFGQELVIEDVQFEDAGKYE 304

Query: 104 CEVSNGVGEAK-SYSIDLSVLAAPYFTVE--PEFINAAEEETVTFECKASGLPEPEIHWV 160
           C+  N   +     S DL++ +AP++T++  P  ++ AE +   F C+   +P P   W 
Sbjct: 305 CQGINDEAQTPIRRSFDLAIESAPFWTIDGRPMSVDGAEFDKAEFTCQTEAIPAPVSFWF 364

Query: 161 HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
            NG PIS+ P +PRR    N++   N+ K D     CN+TN  GY +++ Y+NVL+  P 
Sbjct: 365 LNGIPISKVPADPRRVTVGNKLIFYNMTKEDAQVIQCNSTNKHGYAWENAYLNVLSEPPT 424

Query: 221 ITEAPK-DEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAF 279
           IT+ P  ++   +G+T+ LTC VFG+PKP+V W    ++LTGGRY +LE G L+ITDV+ 
Sbjct: 425 ITDPPLLNQKAAEGQTINLTCTVFGSPKPQVVWKKGSEQLTGGRYKVLEDGHLQITDVSL 484

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL-- 337
            D+G YTC A NK  TA  +GSL V+  T I  +P D  +  G  A F C A +DP    
Sbjct: 485 VDAGTYTCNATNKFDTASATGSLVVRRKTQIQTEPLDVMIYEGTEAKFTCTATTDPEEVN 544

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            LSI W +  + ID+    R  ++N D SLT++ +  LD+G+YTC A   LD  E+ A L
Sbjct: 545 NLSIEWKKDGQLIDYALAQRVFRNNMDNSLTISGTISLDTGKYTCMAVNGLDSDESSAQL 604

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            VQ   + P+N  +    + ++A V+W P
Sbjct: 605 VVQAVPDPPNNVWVRCYNEDRRAEVNWQP 633



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 107/209 (51%), Gaps = 19/209 (9%)

Query: 401  PLEAPSNFTLI-QVIDAKKAVVSWNPV--SPQSLRGHFRGYKVQTWTEKDGEGSIRE--L 455
            P  AP + T++ + I +   +++W  V  SP+ +RG FRGY++Q    +D    IRE  +
Sbjct: 815  PRVAPVDVTIVPESIGSDNVLLTWTQVDTSPEEIRGFFRGYRIQFGKTEDWPQMIREEDV 874

Query: 456  IVNKG-------------ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 502
            I N                    +V+   P S    ++   N  Y GPPS  I F T EG
Sbjct: 875  IFNDPLQYPRPRVKRELPRVVEIKVNHLPPYSDITLQIRVLNKYYAGPPSPTIQFTTLEG 934

Query: 503  VPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
            VPG    ++ +  GS+ F L W  P +PNGVL+GY I YQ++ G  +G L  R   ISDP
Sbjct: 935  VPGPPAMIDVVVRGSTHFELTWDLPYEPNGVLVGYNISYQTITGLNLGRLQYR-EAISDP 993

Query: 563  TTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            T   A+L GL P T YR+ L+  T+ G G
Sbjct: 994  TIQRARLTGLMPDTYYRVFLSAVTRRGKG 1022



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 82/183 (44%), Gaps = 16/183 (8%)

Query: 568 KLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-------PFKNPDNVEGRGSTPNNLVI 620
           K+  L P   Y   +    K G    S +   V       P KNP+NV G G  P+NLVI
Sbjct: 671 KIVSLSPWGNYTFRILARNKIGQSPPSAHTVEVCQVQPGTPDKNPENVIGEGDLPDNLVI 730

Query: 621 SWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE----LVLANQPTFQPYEI 676
            WT MP IE N P FKY + W+R +  +A   ++V   ++S+    LV   Q T++P+ I
Sbjct: 731 FWTPMPSIEQNGPDFKYIVTWQRADIEDA--VENVATIQRSDAWHHLVPDKQETYKPFYI 788

Query: 677 KVVQTWTEKDGEGSIRELIVNKGES--TTTEVD-KFVPASKNFARVLAFNGAYNGPPSEI 733
           KV     + D +   + +I   GE       VD   VP S     VL      +  P EI
Sbjct: 789 KVKANNGKGDAKVEPKTVIGYSGEDEPRVAPVDVTIVPESIGSDNVLLTWTQVDTSPEEI 848

Query: 734 ISF 736
             F
Sbjct: 849 RGF 851



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 98/458 (21%), Positives = 168/458 (36%), Gaps = 47/458 (10%)

Query: 61  PLPQTIWSKDGVPINPSDRIS-QGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSID 119
           P   T+  KD  P     RI+ Q   G  +  + +E  D+G Y C  +N VG A +  ID
Sbjct: 62  PYKWTMNDKDFDPSGNDGRIAIQPGVGTLIFARPIE-RDEGIYQCLANNQVGTALTVKID 120

Query: 120 LSV-LAAPYFTVEPEFINAAEEETVTFEC-KASGLPEPEIHW--VHNGKPISQAPPNPRR 175
           L + +  P+      +        +T  C      P  +I W  + +G+  +      R 
Sbjct: 121 LKLAILEPFQPSGTRYHRPNLGHPLTLRCVPPRSFPAADIFWATISDGERFTPIDLTDRV 180

Query: 176 KVGP----NRITIENLRKSDTGNYGCNATNS-LGYVYKDVYV-------NVLAHAPEIT- 222
            + P    +   + N+   +   Y C   N+ +  + +  Y        N+    PEI  
Sbjct: 181 TMDPEGNLHFAHVLNIDGQNGKTYACIVQNTVMRSIQQGEYAIIQPQGQNIQYMPPEIMW 240

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           ++P     + G+T  + C   G+P P V+W    + +           +L I DV F D+
Sbjct: 241 QSPTHGVALRGQTWRIKCVFSGSPTPRVDWDRVGEAMPSRSRQESFGQELVIEDVQFEDA 300

Query: 283 GEYTCFARNKLGTA--QGSGSLTVKEHTHITDQPEDYEVEAGQ--SATFRCNAVSDPSLK 338
           G+Y C   N       + S  L ++     T       V+  +   A F C   + P+  
Sbjct: 301 GKYECQGINDEAQTPIRRSFDLAIESAPFWTIDGRPMSVDGAEFDKAEFTCQTEAIPA-P 359

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           +S  +L G       ++PR V   +  L     ++ D+    C +  +  +    A L V
Sbjct: 360 VSFWFLNGIPISKVPADPRRVTVGN-KLIFYNMTKEDAQVIQCNSTNKHGYAWENAYLNV 418

Query: 399 --------------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWT 444
                         Q   E  +      V  + K  V W   S Q   G ++        
Sbjct: 419 LSEPPTITDPPLLNQKAAEGQTINLTCTVFGSPKPQVVWKKGSEQLTGGRYK-------V 471

Query: 445 EKDGEGSIREL-IVNKGESTTTEVDKFVPASKNFARVL 481
            +DG   I ++ +V+ G  T    +KF  AS   + V+
Sbjct: 472 LEDGHLQITDVSLVDAGTYTCNATNKFDTASATGSLVV 509


>gi|427796129|gb|JAA63516.1| Putative neural cell adhesion molecule l1, partial [Rhipicephalus
           pulchellus]
          Length = 808

 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 202/671 (30%), Positives = 302/671 (45%), Gaps = 80/671 (11%)

Query: 59  GTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           G P P+  W K+      +  ++ G Y       L I  +  +DQG YTC  SN  G+A 
Sbjct: 4   GAPRPEVKWMKE------AQELTGGRYRVLDSGDLQIDDLLVTDQGEYTCYASNKFGDA- 56

Query: 115 SYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP--EPEIHWVHNGKPISQAPPN 172
           S S  L V      T  PE    A +++ TF C A   P  E +I W+ NG+P+      
Sbjct: 57  SASGSLEVKGKTLITQPPENYEVAADKSATFRCNAEADPSLELKIEWLFNGQPVDPEADA 116

Query: 173 PRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAPEITEAPKDEYT 230
              + G N +TI    + D+G Y C A   L        + V  + + P++ +       
Sbjct: 117 RMVQAGDNSLTITRTIELDSGIYTCVARTELDSDRAQATLTVQDVPNPPQMVK-----ID 171

Query: 231 VDGKTVVLTCRVFG---APKPEVNWIHNQK---ELTGGRYTILETGDLKITDVAFADSGE 284
            DG   ++  +  G   AP    +  +N     +     +  +   D K   V+ +    
Sbjct: 172 CDGLMALVEWKPTGDRRAPILSYSIQYNTSFSPDTWEDAFVNIPAPDTKFK-VSMSPWAN 230

Query: 285 YT--CFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD-------- 334
           YT    ARNK+G +  SG+      +     PED   +       R +   +        
Sbjct: 231 YTFRVVARNKIGPSLPSGA------SSRCTTPEDVPHKNPDRVMGRGDRFDNLLITWTPM 284

Query: 335 -------PSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQYTC 381
                  P     ++W R   P D     R ++        +Y     K   +    +  
Sbjct: 285 PPIEHNAPGFFYKVLWKRDDIP-DATWNSRIIEDWKQNRHVEYGQPTFKPYRIKVEAHNR 343

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
           R Q      E        VPL AP +F L  V+DA+ A  +W+PVSP+S+RGHFRGYK+Q
Sbjct: 344 RGQAHTAATEVIGYSGENVPLAAPQDFKLANVVDARTANFTWSPVSPESVRGHFRGYKIQ 403

Query: 442 TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           TWT  +GE  +RE++V     TT  V  F P S+N   VL FN  YNGPPS+ I F TPE
Sbjct: 404 TWTPDEGEEKLREVVV-PANVTTATVSLFRPFSRNLVHVLVFNDMYNGPPSDSIEFSTPE 462

Query: 502 GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
           GVPG V S E IP+GS+  YL W +P + NGVL GY I Y+ V+GT++GP +ER P + D
Sbjct: 463 GVPGPVASFEGIPMGSTGIYLLWKRPLESNGVLTGYHIYYEEVRGTQLGPKMERQPPVRD 522

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVIS 621
           P  + AKLAGL+P TKYRI +   T  G G  +    ++  +  D  E     P+    +
Sbjct: 523 PLESRAKLAGLKPRTKYRITIHAATAQGQGDPN----FIELETADESE---RVPDMPDFT 575

Query: 622 WTAMPEIEHNA-------------PHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQ 668
           W  +P+ + +A             P   + + +RR    E W +  +++  +  +++   
Sbjct: 576 WAYLPDRDGHAAVQVTWLPAMAGHPGSHFYVQYRRKGD-ETW-ETTMVEKNEDNILVKGL 633

Query: 669 PTFQPYEIKVV 679
            T   YE++V+
Sbjct: 634 ETGALYEMRVI 644



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 106/202 (52%), Positives = 137/202 (67%), Gaps = 6/202 (2%)

Query: 241 RVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSG 300
           RVFGAP+PEV W+   +ELTGGRY +L++GDL+I D+   D GEYTC+A NK G A  SG
Sbjct: 1   RVFGAPRPEVKWMKEAQELTGGRYRVLDSGDLQIDDLLVTDQGEYTCYASNKFGDASASG 60

Query: 301 SLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQ 360
           SL VK  T IT  PE+YEV A +SATFRCNA +DPSL+L I WL   +P+D E++ R VQ
Sbjct: 61  SLEVKGKTLITQPPENYEVAADKSATFRCNAEADPSLELKIEWLFNGQPVDPEADARMVQ 120

Query: 361 SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQV-IDAKKA 419
           + D SLT+T++ ELDSG YTC A+TELD   AQATLTVQ   + P+   ++++  D   A
Sbjct: 121 AGDNSLTITRTIELDSGIYTCVARTELDSDRAQATLTVQ---DVPNPPQMVKIDCDGLMA 177

Query: 420 VVSWNPVSPQSLRGHFRGYKVQ 441
           +V W P   +  R     Y +Q
Sbjct: 178 LVEWKPTGDR--RAPILSYSIQ 197



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 179/463 (38%), Gaps = 102/463 (22%)

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ---VPLEAPSNFTLIQV 413
           R + S D  L +      D G+YTC A  +     A  +L V+   +  + P N+   +V
Sbjct: 25  RVLDSGD--LQIDDLLVTDQGEYTCYASNKFGDASASGSLEVKGKTLITQPPENY---EV 79

Query: 414 IDAKKAVVSWNPVSPQSLRGH----FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDK 469
              K A    N  +  SL       F G  V      D E   R  +V  G+++ T + +
Sbjct: 80  AADKSATFRCNAEADPSLELKIEWLFNGQPV------DPEADAR--MVQAGDNSLT-ITR 130

Query: 470 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQ 529
            +         +A     +       + +T + VP   Q ++    G  A  ++W     
Sbjct: 131 TIELDSGIYTCVARTELDS---DRAQATLTVQDVPNPPQMVKIDCDGLMAL-VEWKPTGD 186

Query: 530 PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
               ++ Y I+Y     T   P      +++ P   +     + P   Y   +    K G
Sbjct: 187 RRAPILSYSIQYN----TSFSPDTWEDAFVNIPAPDTKFKVSMSPWANYTFRVVARNKIG 242

Query: 590 ----DGAESKYLF--YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
                GA S+      VP KNPD V GRG   +NL+I+WT MP IEHNAP F Y++ W+R
Sbjct: 243 PSLPSGASSRCTTPEDVPHKNPDRVMGRGDRFDNLLITWTPMPPIEHNAPGFFYKVLWKR 302

Query: 644 HNTGEA-WNQDDVLDWRQSELVLANQPTFQPYEIKVVQ---------------------- 680
            +  +A WN   + DW+Q+  V   QPTF+PY IKV                        
Sbjct: 303 DDIPDATWNSRIIEDWKQNRHVEYGQPTFKPYRIKVEAHNRRGQAHTAATEVIGYSGENV 362

Query: 681 ---------------------TWTEKDGEG--------SIRELIVNKGESTTTEVDKFVP 711
                                TW+    E          I+    ++GE    EV   VP
Sbjct: 363 PLAAPQDFKLANVVDARTANFTWSPVSPESVRGHFRGYKIQTWTPDEGEEKLREV--VVP 420

Query: 712 AS---------KNFARVL----AFNGAYNGPPSEIISFVTPEG 741
           A+         + F+R L     FN  YNGPPS+ I F TPEG
Sbjct: 421 ANVTTATVSLFRPFSRNLVHVLVFNDMYNGPPSDSIEFSTPEG 463


>gi|322789037|gb|EFZ14495.1| hypothetical protein SINV_09865 [Solenopsis invicta]
          Length = 546

 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 150/396 (37%), Positives = 208/396 (52%), Gaps = 38/396 (9%)

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFA 280
           IT+ P +  T++GKT+ + CRVFGAPKPEV WI N  ELTGG Y  L+ GDLKI +V   
Sbjct: 33  ITQPPMNLTTIEGKTIQIMCRVFGAPKPEVKWIRNGLELTGGCYKTLDEGDLKIENVTLL 92

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV-------- 332
           D+G YTC+A N  G++  S   T   +T   D P           T   N V        
Sbjct: 93  DAGIYTCYASNIFGSSLPSPHSTGACNTE-ADVPYGNPSNVMGKGTTPQNLVISWKRMTM 151

Query: 333 ---SDPSLKLSIVWLRG---------------SEPIDFESEPRFVQSNDYSLTVTKSSEL 374
              + P  +  I + R                 + +  E++P +     Y + V   +E 
Sbjct: 152 EYHNGPKFQYKIFYRRDIPCEDWVTIDVHDWKKDKVVVENQPTY---QKYRIKVVAMNE- 207

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
              +  CR   +    E        VPL+AP NFTL ++       +SW PV  + +RG 
Sbjct: 208 ---KGECRIPAD----EVIGYSGEDVPLQAPDNFTLNEIKSRTTVELSWTPVPEEMVRGE 260

Query: 435 FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
            +GYK+QTWT+KDGE  +RE+ +  G+     + + VP SKNFAR+LA+NG Y GP SE 
Sbjct: 261 LQGYKIQTWTDKDGEEGMREIDIRGGDKMHALITRLVPYSKNFARILAYNGRYAGPASET 320

Query: 495 ISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLE 554
           +SF  PEGVP  V+  +   +GSSA +L W +P + NG+L GY I Y+    T +  LLE
Sbjct: 321 LSFDMPEGVPEPVRHFKVFNMGSSALFLNWTRPAKTNGILTGYIIDYEVASDTLLKNLLE 380

Query: 555 RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGD 590
           R P++ DP  TSA LA L P+T YR+ +   TK G+
Sbjct: 381 RKPHVVDPQATSAILAPLAPNTIYRVFIRATTKVGN 416



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 92/205 (44%), Gaps = 63/205 (30%)

Query: 600 VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW--------- 650
           VP+ NP NV G+G+TP NLVISW  M    HN P F+Y+IF+RR    E W         
Sbjct: 124 VPYGNPSNVMGKGTTPQNLVISWKRMTMEYHNGPKFQYKIFYRRDIPCEDWVTIDVHDWK 183

Query: 651 -------NQ-----------------------DDVLDWRQSELVLANQPTFQPYEIKV-- 678
                  NQ                       D+V+ +   ++ L     F   EIK   
Sbjct: 184 KDKVVVENQPTYQKYRIKVVAMNEKGECRIPADEVIGYSGEDVPLQAPDNFTLNEIKSRT 243

Query: 679 ----------------------VQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 716
                                 +QTWT+KDGE  +RE+ +  G+     + + VP SKNF
Sbjct: 244 TVELSWTPVPEEMVRGELQGYKIQTWTDKDGEEGMREIDIRGGDKMHALITRLVPYSKNF 303

Query: 717 ARVLAFNGAYNGPPSEIISFVTPEG 741
           AR+LA+NG Y GP SE +SF  PEG
Sbjct: 304 ARILAYNGRYAGPASETLSFDMPEG 328



 Score = 43.1 bits (100), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 3/77 (3%)

Query: 128 FTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENL 187
            T  P  +   E +T+   C+  G P+PE+ W+ NG  ++       + +    + IEN+
Sbjct: 33  ITQPPMNLTTIEGKTIQIMCRVFGAPKPEVKWIRNGLELTGG---CYKTLDEGDLKIENV 89

Query: 188 RKSDTGNYGCNATNSLG 204
              D G Y C A+N  G
Sbjct: 90  TLLDAGIYTCYASNIFG 106


>gi|2275260|gb|AAC47654.1| tractin [Hirudo medicinalis]
          Length = 1880

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 143/422 (33%), Positives = 215/422 (50%), Gaps = 11/422 (2%)

Query: 12  GNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDG 71
           GN  ++ +  +     + +HAP   + + +K++AL  +  +L CIF G P P   WSK G
Sbjct: 221 GNDCIIRINGSSKDGVR-KHAPGVMWTSPRKDLALTGQSKKLKCIFSGYPTPNVSWSKRG 279

Query: 72  VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYF--T 129
               P   +S       L I++VE  D G+Y C  S+  G+A    I+L+V + P +   
Sbjct: 280 SDFPPKIVVSS-ELPHELEIRNVEVGDAGTYRCTGSSTYGKAVFVDIELTVESMPRWKDN 338

Query: 130 VEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR--ITIENL 187
             PE +N ++EET  F+C   G+P P + W+ N +P+   PPNPR ++   R  +T  N+
Sbjct: 339 KPPEDVNTSDEETAVFKCGVEGIPRPTVEWMLNKRPLEDLPPNPRMRMNDERTVLTFSNV 398

Query: 188 RKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAP 246
              D     CNA+N  GY+  + Y+NV A  P   + P     + +GK  V+ C VFGAP
Sbjct: 399 SSKDIQVIQCNASNVHGYILANAYLNVFAEPPSFQDLPVSPMKLTEGKNTVVQCSVFGAP 458

Query: 247 KPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE 306
           KP V  + N   ++G R+ +   G+L ++++  +DSG Y CFA NK G      +L V+ 
Sbjct: 459 KPLVTCLRNDTVISGDRFKVDTHGNLLVSNLQLSDSGNYICFASNKFGNDSVGANLIVRR 518

Query: 307 HTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LSIVWLRGSEPIDFE-SEPRFVQSND 363
            T I+  P D+    G      CNA +DP  K  LS+ WL+  EPI FE S P      D
Sbjct: 519 RTEISRPPSDHVTTVGSEVVLHCNATTDPEEKNSLSVKWLKDGEPITFEGSSPGVFDFRD 578

Query: 364 YSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSW 423
            SLT+ K    +SG Y C A T+LD       L V+   + P N  +++  +   AV+ W
Sbjct: 579 NSLTIKKVEVKESGTYVCIASTDLDSDNITVELVVKGVPDPPENVEILRC-NKSMAVIEW 637

Query: 424 NP 425
            P
Sbjct: 638 TP 639



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 133/563 (23%), Positives = 216/563 (38%), Gaps = 58/563 (10%)

Query: 145 FECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG-PNRITIENLRKSDTGNYGCNATNSL 203
            +C  SG P P + W   G   S  PP        P+ + I N+   D G Y C  +++ 
Sbjct: 261 LKCIFSGYPTPNVSWSKRG---SDFPPKIVVSSELPHELEIRNVEVGDAGTYRCTGSSTY 317

Query: 204 G-YVYKDVYVNVLAHAP-EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT- 260
           G  V+ D+ + V +    +  + P+D  T D +T V  C V G P+P V W+ N++ L  
Sbjct: 318 GKAVFVDIELTVESMPRWKDNKPPEDVNTSDEETAVFKCGVEGIPRPTVEWMLNKRPLED 377

Query: 261 ---GGRYTI-LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTV-KEHTHITDQP- 314
                R  +  E   L  ++V+  D     C A N  G    +  L V  E     D P 
Sbjct: 378 LPPNPRMRMNDERTVLTFSNVSSKDIQVIQCNASNVHGYILANAYLNVFAEPPSFQDLPV 437

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
              ++  G++   +C+    P  K  +  LR    I   S  RF      +L V+     
Sbjct: 438 SPMKLTEGKNTVVQCSVFGAP--KPLVTCLRNDTVI---SGDRFKVDTHGNLLVSNLQLS 492

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
           DSG Y C A  +       A L V+                 ++  +S  P    +  G 
Sbjct: 493 DSGNYICFASNKFGNDSVGANLIVR-----------------RRTEISRPPSDHVTTVGS 535

Query: 435 FRGYKVQTWTEKDGEGSIRELIVNKGESTTTE-----VDKFVPASKNFARV-LAFNGAY- 487
                    T+ + + S+    +  GE  T E     V  F   S    +V +  +G Y 
Sbjct: 536 EVVLHCNATTDPEEKNSLSVKWLKDGEPITFEGSSPGVFDFRDNSLTIKKVEVKESGTYV 595

Query: 488 -----NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
                +     I   +  +GVP   +++E +    S   ++W      +  + G+ + Y 
Sbjct: 596 CIASTDLDSDNITVELVVKGVPDPPENVEILRCNKSMAVIEWTPGFDNHDPITGHYV-YC 654

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL----- 597
           +    + G +  R  ++  P++ S+    L P   Y  H+      G    SK+      
Sbjct: 655 NTSRDEPG-VYHRNEHLV-PSSKSSASFHLRPWNNYTFHVKAINNIGMSGPSKFTTDFCS 712

Query: 598 --FYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDV 655
              + P  NP+ V      P  LVI+W  M   + N P F Y + +R  +  E   +  V
Sbjct: 713 TPAHYPTMNPEKVCTESREPGQLVITWEPMGSNDLNGPGFHYLVGFRLVDQDEELVR-AV 771

Query: 656 LDWRQSELVLANQPTFQPYEIKV 678
            DW+  ELV+  Q  F+ +EI V
Sbjct: 772 HDWQTKELVIEGQDVFKEFEIYV 794



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 97/219 (44%), Gaps = 31/219 (14%)

Query: 401  PLEAPSNFTLI-QVIDAKKAVVSWNPVS--PQSLRGHFRGYKVQTWTEKDGEG-SIRELI 456
            P  AP NF L    +++  AV  W+ V   P+ ++G FRGY++Q W   + +    +++I
Sbjct: 818  PKVAPKNFKLRGDTLNSSTAVFEWDEVDDDPELIQGFFRGYQIQYWRVSNPDDVRAQDVI 877

Query: 457  V--------------------NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS 496
            V                    N        V    P S   A VL  NG   G  SE I+
Sbjct: 878  VRPWNPCPPANRKRRSRSKNGNHDGVVIGHVTNLWPDSMVKAAVLVLNGGKKGELSEPIT 937

Query: 497  FVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERL 556
            F  PEGVP  V   + +  GS    + W  P + NG L GY I+Y+     K  P +++ 
Sbjct: 938  FYVPEGVPSKVMEPKVMERGSDHIKVSWKPPLEKNGNLTGYLIQYK-----KAPPSMDQK 992

Query: 557  PYI--SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
              I   DP     K+  LE +T Y I++ G TKAG G E
Sbjct: 993  KEILVKDPDQLEKKIMDLESNTSYLIYIYGTTKAGAGEE 1031



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 97/422 (22%), Positives = 161/422 (38%), Gaps = 38/422 (9%)

Query: 10  KIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRN-KKVELFCIFGGTPLPQTIWS 68
           ++     L ++AT ++  +  + P         E   +N ++VE+ C   GTP     W 
Sbjct: 9   RLQEACFLLLLATTMTFQKEVNRPPSITAHPPYESTFKNMEEVEIPCEATGTPPLVFQWF 68

Query: 69  KDGVPINPS--DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAP 126
           KDG P+  S  +R  +     ++ + + E  D+G Y C V N  G A S    L +    
Sbjct: 69  KDGEPLEKSEAERPFKDEDQGTITLYNNELKDEGYYQCIVKNKYGTAASVKTLLKMAVQE 128

Query: 127 YFTV--EPEFINAAEEETVTFECK-ASGLPEPEIHW--VHNGKPISQAPPNPR------- 174
            F    EP+ +N    + +T  C      P P+++W  V  G  +       R       
Sbjct: 129 SFPTVKEPQIVNVRVGDNLTLRCNPPKSYPTPDVYWGTVKKGAKLLPLENTMRYNLDYEG 188

Query: 175 -----------RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT- 222
                       + G   + I +     +   G +    +    KD    V  HAP +  
Sbjct: 189 NFHFANVMEEDHREGAYYLCISHNNAMRSSVQGNDCIIRINGSSKD---GVRKHAPGVMW 245

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILET-GDLKITDVAFAD 281
            +P+ +  + G++  L C   G P P V+W     +         E   +L+I +V   D
Sbjct: 246 TSPRKDLALTGQSKKLKCIFSGYPTPNVSWSKRGSDFPPKIVVSSELPHELEIRNVEVGD 305

Query: 282 SGEYTCFARNKLGTAQGSG-SLTVKEHTHITDQ--PEDYEVEAGQSATFRCNAVSDPSLK 338
           +G Y C   +  G A      LTV+      D   PED      ++A F+C     P  +
Sbjct: 306 AGTYRCTGSSTYGKAVFVDIELTVESMPRWKDNKPPEDVNTSDEETAVFKCGVEGIP--R 363

Query: 339 LSIVWLRGSEPI-DFESEPRFVQSNDYS-LTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            ++ W+    P+ D    PR   +++ + LT +  S  D     C A     +I A A L
Sbjct: 364 PTVEWMLNKRPLEDLPPNPRMRMNDERTVLTFSNVSSKDIQVIQCNASNVHGYILANAYL 423

Query: 397 TV 398
            V
Sbjct: 424 NV 425


>gi|443700552|gb|ELT99433.1| hypothetical protein CAPTEDRAFT_120325, partial [Capitella teleta]
          Length = 1186

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 162/496 (32%), Positives = 233/496 (46%), Gaps = 24/496 (4%)

Query: 31  HAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKS 88
            APK ++ +    V +R   + + CIF G P P+  W +   G  +  S    + +  K 
Sbjct: 150 EAPKVEWTSDIGPVVIRGGMLRMKCIFSGYPTPRVTWRRLPQGTEMPRSHFFPEESANKE 209

Query: 89  LIIKHVEFSDQGSYTCEVSN-GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
           L+I +V+F DQG+Y C  SN   G   S    + V + P+F  +P  ++++EEE   F C
Sbjct: 210 LVINNVQFEDQGTYECSASNMDGGSTVSRKFSVRVQSMPFFIEKPMNVHSSEEENAEFLC 269

Query: 148 KASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVY 207
           KA G P+PEI W  NG  +   P + RR V  N IT  NL  SD     CNATN  GY++
Sbjct: 270 KAGGSPQPEILWSINGIAVENLPRDSRRIVTQNSITYRNLTSSDAQVIQCNATNKHGYIF 329

Query: 208 KDVYVNVLAHAPEITEAPKDEYT--VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
            + Y+NVLA AP    AP D  T     + + L C  FGAP PE+ W   +++ +G +Y 
Sbjct: 330 ANAYLNVLAEAPSFIRAP-DAVTKAAVSQDITLICEAFGAPDPEITWKRWREDDSGQKYL 388

Query: 266 ILETG----------DLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE 315
            L  G           L I  V+  D G Y C+A NK G    SG L V+E T I ++P 
Sbjct: 389 ELVPGPPKFRKNQKNHLTIIGVSSDDQGTYECYASNKFGDVDASGDLIVRERTTIHERPH 448

Query: 316 DYEVEAGQSATFRCNAVSD--PSLKLSIVWLRGSEPIDFESEPRF-VQSNDYSLTVTKSS 372
           D  V A     F+CNA +D      L   W +    IDF+ E R  +  ND+SL +T + 
Sbjct: 449 DATVNASTDVIFKCNATTDELEDHNLKYEWRKNGRLIDFQREGRLSMNMNDHSLIITGAQ 508

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
             DS +YTC A   LD     ATL V+   + P++  + +   +  A ++W P S  ++ 
Sbjct: 509 VEDSAEYTCVAGNGLDNDSISATLKVKDVPDPPTDVNM-RSCGSNTAEITWTPGSDNNV- 566

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 492
                Y V   T  D  G   E       +  +   K  P ++    V A +     P S
Sbjct: 567 -PISEYIVFYNTSFDAAGEYTEGARVDASTQLSAKVKLSPWAEYTFHVQAVSAMGKSPRS 625

Query: 493 EIIS--FVTPEGVPGT 506
              S   +TP+ +P T
Sbjct: 626 AFTSSTCITPQKIPYT 641



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 155/651 (23%), Positives = 250/651 (38%), Gaps = 67/651 (10%)

Query: 73  PINPSDRISQGNYGKSLI--IKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVL---AAPY 127
           PI  +DRI     G   +  ++  +F+   +Y+C V N V  +     D  ++     P 
Sbjct: 89  PIATNDRIGLDYDGNFYLANVRMEDFAAAATYSCLVKNSVLRSFVIGDDNKIIPQDGTPS 148

Query: 128 F---------TVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +          + P  I       +  +C  SG P P + W    + + Q    PR    
Sbjct: 149 YEAPKVEWTSDIGPVVIRGG---MLRMKCIFSGYPTPRVTW----RRLPQGTEMPRSHFF 201

Query: 179 P-----NRITIENLRKSDTGNYGCNATNSLG--YVYKDVYVNVLAHAPEITEAPKDEYTV 231
           P       + I N++  D G Y C+A+N  G   V +   V V +  P   E P + ++ 
Sbjct: 202 PEESANKELVINNVQFEDQGTYECSASNMDGGSTVSRKFSVRVQS-MPFFIEKPMNVHSS 260

Query: 232 DGKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           + +     C+  G+P+PE+ W  N    + L      I+    +   ++  +D+    C 
Sbjct: 261 EEENAEFLCKAGGSPQPEILWSINGIAVENLPRDSRRIVTQNSITYRNLTSSDAQVIQCN 320

Query: 289 ARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAG--QSATFRCNAVSDPSLKLSIVWLRG 346
           A NK G    +  L V        +  D   +A   Q  T  C A   P  +  I W R 
Sbjct: 321 ATNKHGYIFANAYLNVLAEAPSFIRAPDAVTKAAVSQDITLICEAFGAPDPE--ITWKRW 378

Query: 347 SEPIDFE-------SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            E    +         P+F ++    LT+   S  D G Y C A  +   ++A   L V+
Sbjct: 379 REDDSGQKYLELVPGPPKFRKNQKNHLTIIGVSSDDQGTYECYASNKFGDVDASGDLIVR 438

Query: 400 ---VPLEAPSNFTLIQVIDAK-KAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIREL 455
                 E P + T+    D   K   + + +   +L+  +R        +++G      L
Sbjct: 439 ERTTIHERPHDATVNASTDVIFKCNATTDELEDHNLKYEWRKNGRLIDFQREGR-----L 493

Query: 456 IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPL 515
            +N  + +       V  S  +   +A NG  N     I + +  + VP     +     
Sbjct: 494 SMNMNDHSLIITGAQVEDSAEYT-CVAGNGLDN---DSISATLKVKDVPDPPTDVNMRSC 549

Query: 516 GSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
           GS+   + W  P   N V +   I + +      G   E    +   T  SAK+  L P 
Sbjct: 550 GSNTAEITWT-PGSDNNVPISEYIVFYNTSFDAAGEYTEGA-RVDASTQLSAKVK-LSPW 606

Query: 576 TKYRIHLAGYTKAGDGAESKYLFY-------VPFKNPDNVEGRGSTPNNLVISWTAMPEI 628
            +Y  H+   +  G    S +          +P+ NP  V      P+ LVI W  MP++
Sbjct: 607 AEYTFHVQAVSAMGKSPRSAFTSSTCITPQKIPYTNPTGVCTESRAPDQLVIVWEPMPQM 666

Query: 629 EHNAPHFKYRIFWRRHN-TGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           EHN   F Y + +RR N  G      +V DWRQ+ELV+ NQ  F  YEI V
Sbjct: 667 EHNGEGFAYFVSYRRKNYPGAQEISTEVTDWRQTELVVGNQEIFSEYEISV 717



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 11/215 (5%)

Query: 400 VPLEAPSNFTLIQV-IDAKKAVVSWNPVS--PQSLRGHFRGYK---VQTWTEKDG-EGSI 452
           VPL +  NF + +  I++  A   W+PV+  P  +RG F+GY+   +  W       GS+
Sbjct: 742 VPLVSAQNFAVDESSINSTSARFVWDPVTEDPAMIRGFFKGYESVIINEWNPCPALVGSM 801

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA 512
           R     +    +   ++  P S+  A VL  NG   GP S+ I+F TPEG+P  V++   
Sbjct: 802 RRR--RRASQVSAHTNELWPYSRITAGVLVANGGKTGPLSDTITFDTPEGLPSIVRNFRV 859

Query: 513 IPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGL 572
              GS    ++W  P   NGVL+GY + +++ +G +    +  L  +S+P     K   L
Sbjct: 860 TETGSHHLKMEWDPPLFANGVLLGYVVGFRTGEGDEPLGDMNELD-VSNPLQLYKKALNL 918

Query: 573 EPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPD 606
           EP T+Y +++  +T  G G  ES      P K PD
Sbjct: 919 EPETRYLVYIWAFTGKGRGPRESDEAQTGPEKAPD 953



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 143/364 (39%), Gaps = 41/364 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAE-EETVTFE 146
           S+II   + SD+G Y C  +N  G A S    L +     F V+   I+  +  + +   
Sbjct: 5   SIIINKPQPSDEGIYQCFATNTFGTALSTKTLLKMAVLNPFKVKDASIHRPQVGKALQLR 64

Query: 147 CKAS-GLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSD---TGNYGCNA 199
           C      P   ++W  N       P     ++G +      + N+R  D      Y C  
Sbjct: 65  CTPPYSYPAGSVYWGTNRPGSRLTPIATNDRIGLDYDGNFYLANVRMEDFAAAATYSCLV 124

Query: 200 TNSL--GYVYKDVYVNVLAHAPEITEAPKDEYTVD-------GKTVVLTCRVFGAPKPEV 250
            NS+   +V  D    +        EAPK E+T D       G  + + C   G P P V
Sbjct: 125 KNSVLRSFVIGDDNKIIPQDGTPSYEAPKVEWTSDIGPVVIRGGMLRMKCIFSGYPTPRV 184

Query: 251 NW--IHNQKELTGGRYTILETG--DLKITDVAFADSGEYTCFARNKLG--TAQGSGSLTV 304
            W  +    E+    +   E+   +L I +V F D G Y C A N  G  T     S+ V
Sbjct: 185 TWRRLPQGTEMPRSHFFPEESANKELVINNVQFEDQGTYECSASNMDGGSTVSRKFSVRV 244

Query: 305 KEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVW-LRGSEPIDFESEP----RFV 359
           +      ++P +      ++A F C A   P  +  I+W + G   I  E+ P    R V
Sbjct: 245 QSMPFFIEKPMNVHSSEEENAEFLCKAGGSP--QPEILWSING---IAVENLPRDSRRIV 299

Query: 360 QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDA-KK 418
             N  S+T    +  D+    C A  +  +I A A L V    EAPS    I+  DA  K
Sbjct: 300 TQN--SITYRNLTSSDAQVIQCNATNKHGYIFANAYLNVLA--EAPS---FIRAPDAVTK 352

Query: 419 AVVS 422
           A VS
Sbjct: 353 AAVS 356


>gi|296209983|ref|XP_002751798.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Callithrix
           jacchus]
          Length = 1183

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/384 (36%), Positives = 201/384 (52%), Gaps = 11/384 (2%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  I P++R S  N+ K+L I HV  +D G+Y C
Sbjct: 277 LRGNVLLLECIAEGLPTPLIYWAKEDG--ILPTNRTSYKNFKKTLQITHVSEADSGNYQC 334

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+ + P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 335 IAKNALG-AIHHTISVRVKAAPYWIMAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 393

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 394 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 453

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 454 ANTLYQVITNRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 513

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 514 TGTYTCVARNKLGMAKNDVHLEIKDPTWIIKQPEYAVVQRGGMVSFECKVKHDHTLVLTV 573

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +E  +  S+ RF    D+ L V   S+ DSG YTC A T LD + A A L+V   
Sbjct: 574 LWLKDNE--ELPSDERFTVDKDH-LVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDV 630

Query: 402 LEAPSNFTLIQVIDAKKAVVSWNP 425
              P +  L   +D K   +SW P
Sbjct: 631 PNPPFDLELTDQLD-KSVQLSWTP 653



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 143/556 (25%), Positives = 227/556 (40%), Gaps = 52/556 (9%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPN-PRRKVGPNRITIENLRKSDTGNYGCNATN 201
           +  EC A GLP P I+W    K     P N    K     + I ++ ++D+GNY C A N
Sbjct: 282 LLLECIAEGLPTPLIYW---AKEDGILPTNRTSYKNFKKTLQITHVSEADSGNYQCIAKN 338

Query: 202 SLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK--EL 259
           +LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    E+
Sbjct: 339 ALGAIHHTISVRVKA-APYWIMAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPIEI 397

Query: 260 TGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED-- 316
                +    GD  I ++V    S  Y C A N+ G    +  + V         P +  
Sbjct: 398 APDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPANTL 457

Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
           Y+V   + A   C     P    +I W +G++      E  +V   + +L +  + +  +
Sbjct: 458 YQVITNRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKDST 514

Query: 377 GQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRG 433
           G YTC A+ +L   +    L ++ P   ++ P  + ++Q    +  +VS+     +    
Sbjct: 515 GTYTCVARNKLGMAKNDVHLEIKDPTWIIKQPE-YAVVQ----RGGMVSF-----ECKVK 564

Query: 434 HFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG---- 489
           H     +     KD E       +   E  T + D  V A  +      +    N     
Sbjct: 565 HDHTLVLTVLWLKDNEE------LPSDERFTVDKDHLVVADVSDDDSGTYTCVANTTLDS 618

Query: 490 -PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTK 548
              S ++S V    VP     LE       +  L W   +  N  +  + I+Y+      
Sbjct: 619 VSASAVLSVV---DVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHE- 674

Query: 549 VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV--PF 602
             P L         T T+A+L  L P   Y   +      G      A  +YL     P 
Sbjct: 675 --PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVTAVNSIGKSLPSEASEQYLTKASEPD 731

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
           KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W    V+    S+
Sbjct: 732 KNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS--VVVANVSK 789

Query: 663 LVLANQPTFQPYEIKV 678
            +++  PTF PY IKV
Sbjct: 790 YIVSGTPTFVPYLIKV 805



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 98/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  ++     R  I  K
Sbjct: 828  LPMVAPGNVQ-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQNSPKRNRRHIEKK 886

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 887  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDKVFNTPEGVPSAPSSLKIVN 946

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 947  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIP----ANKTRWTLKNL 1002

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1003 NFSTRYKFYFYAQTSAGSGSQ 1023



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 142/604 (23%), Positives = 232/604 (38%), Gaps = 69/604 (11%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 374 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 429

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 430 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVITNRPALLDCAFFGSPLPTIEWFKGAK- 487

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    DV++ +      I + 
Sbjct: 488 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPTWIIKQ 545

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 546 PEYAVVQRGGMVSFECKVKHDHTLVLTVLWLKDNEELPSDERFTVDKDHLVVADVSDDDS 605

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V +   + + P D E+              D S++LS  
Sbjct: 606 GTYTCVANTTLDSVSASAVLSVVD---VPNPPFDLELTDQL----------DKSVQLS-- 650

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 651 WTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVTAVNS 710

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 711 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 769

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 770 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAVVMGHSGE 826

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     +++   + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 827 DLPMVAPGNVQVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQNSPKRNRRHIEKK 886

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPN 616
                 + T   L GLEP + Y +++      G+G  S      P K  +  EG  S P+
Sbjct: 887 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPAS------PDKVFNTPEGVPSAPS 940

Query: 617 NLVI 620
           +L I
Sbjct: 941 SLKI 944



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 132/340 (38%), Gaps = 49/340 (14%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNGKPIS---Q 168
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  ISALEVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKD 86

Query: 169 APPNPRRKVGPNRITIENLRKSDT--GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
           A    +   G   I I +  K++T  G Y C A N  G    +  V   + +P  T+   
Sbjct: 87  ALVTMKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKL 146

Query: 227 DEYTV-DGKTVVLTCRVFGAPKPEVN-WIHN--QKELTGGRYTILETGDLKITDVAFADS 282
           +  T+ +G+++VL CR      P +  W+ N  Q+     R +    GDL  ++V   D+
Sbjct: 147 EPITLQNGQSLVLPCRPPIGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDT 206

Query: 283 GE-YTCFAR-NKLGTAQGSGSLTVKE------HTHITDQPEDYEVEAGQSATFR------ 328
            E Y C+AR N   T Q    ++VK       +  I     D E    +S   R      
Sbjct: 207 REDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFYGAKSNRERPPTFLT 266

Query: 329 --CNAVSDPSLKLSIVWLRG------SEPIDFESEPRFVQSNDYS-------LTVTKSSE 373
              NA +   L+ +++ L        +  I +  E   + +N  S       L +T  SE
Sbjct: 267 PEGNASNKEELRGNVLLLECIAEGLPTPLIYWAKEDGILPTNRTSYKNFKKTLQITHVSE 326

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
            DSG Y C A+  L  I    ++ V+     + AP N  L
Sbjct: 327 ADSGNYQCIAKNALGAIHHTISVRVKAAPYWIMAPQNLVL 366


>gi|403257022|ref|XP_003921137.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Saimiri
           boliviensis boliviensis]
          Length = 1192

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 149/421 (35%), Positives = 213/421 (50%), Gaps = 28/421 (6%)

Query: 24  ISASQNRHAPK-----QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPS 77
           ISA  NR  P      +   + K+E  LR   + L CI  G P P   W+K DG  I P+
Sbjct: 239 ISAKSNRERPPTFLTPEGNASSKEE--LRGNVLLLECIAEGLPTPLIYWAKEDG--ILPT 294

Query: 78  DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINA 137
           +R S  N+ K+L I HV  +D G+Y C   N +G A  ++I + V AAPY+ + P+ +  
Sbjct: 295 NRTSYKNFKKTLQITHVSEADSGNYQCIAKNALG-AIHHTISVRVKAAPYWIMAPQNLVL 353

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  E  T  C+A+G P+P I W+ NG PI  AP +P RK+  + I   N+++  +  Y C
Sbjct: 354 SPGEDGTLICRANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQC 413

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQ 256
           NA+N  GY+  + ++NVLA  P I       Y V   +  +L C  FG+P P + W    
Sbjct: 414 NASNEYGYLLANAFINVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGA 473

Query: 257 K--ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
           K   L    Y + E G L+I       +G YTC ARNKLG A+    L +K+ T I  QP
Sbjct: 474 KGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDPTWIIKQP 533

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           E   V+ G   +F C    D +L L+++WL+ +E  +  ++ RF    D+ L V   S+ 
Sbjct: 534 EYAVVQRGGMVSFECKVKHDHTLVLTVLWLKDNE--ELPNDERFTVDKDH-LVVADVSDD 590

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPS----------NFTLIQVIDAKKAVVSWN 424
           DSG YTC A T LD + A A L+V  P   P           +  L   +D K   +SW 
Sbjct: 591 DSGTYTCVANTTLDSVSASAVLSVVAPTPTPVPVYDVPNPPFDLELTDQLD-KSVQLSWT 649

Query: 425 P 425
           P
Sbjct: 650 P 650



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 159/641 (24%), Positives = 259/641 (40%), Gaps = 68/641 (10%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTC--EVSNGVGEAKSYSIDLSVLAA------PYF 128
           S+R+SQG  G       +    +  Y C    ++     +   I + V++A      P  
Sbjct: 191 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISAKSNRERPPT 250

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGKPISQAPPN-PRRKVGPNRIT 183
            + PE   +++EE     +  EC A GLP P I+W    K     P N    K     + 
Sbjct: 251 FLTPEGNASSKEELRGNVLLLECIAEGLPTPLIYW---AKEDGILPTNRTSYKNFKKTLQ 307

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVF 243
           I ++ ++D+GNY C A N+LG ++  + V V A AP    AP++     G+   L CR  
Sbjct: 308 ITHVSEADSGNYQCIAKNALGAIHHTISVRVKA-APYWIMAPQNLVLSPGEDGTLICRAN 366

Query: 244 GAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSG 300
           G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    + 
Sbjct: 367 GNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANA 426

Query: 301 SLTVKEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF 358
            + V         P +  Y+V A + A   C     P    +I W +G++      E  +
Sbjct: 427 FINVLAEPPRILTPANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIY 483

Query: 359 VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVID 415
           V   + +L +  + +  +G YTC A+ +L   +    L ++ P   ++ P  + ++Q   
Sbjct: 484 VLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDPTWIIKQPE-YAVVQ--- 539

Query: 416 AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
            +  +VS+     +    H     +     KD E       +   E  T + D  V A  
Sbjct: 540 -RGGMVSF-----ECKVKHDHTLVLTVLWLKDNEE------LPNDERFTVDKDHLVVADV 587

Query: 476 NFARVLAFNGAYNG-----PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLK 523
           +      +    N        S ++S V P   P  V  +   P           +  L 
Sbjct: 588 SDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPVPVYDVPNPPFDLELTDQLDKSVQLS 647

Query: 524 WVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
           W   +  N  +  + I+Y+        P L         T T+A+L  L P   Y   + 
Sbjct: 648 WTPGDDNNSPITKFIIEYEDAMHE---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVT 703

Query: 584 GYTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKY 637
                G      A  +Y+     P KNP  VEG GS P+NLVI+W  +   E N P  +Y
Sbjct: 704 AMNSIGKSLPSEASEQYMTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQY 763

Query: 638 RIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           ++ WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 764 KVSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 802



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 98/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  ++     R  I  K
Sbjct: 825  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQNSPKRNRRHIEKK 883

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 884  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 943

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 944  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTQWTLKNL 999

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1000 NFSTRYKFYFYAQTSAGSGSQ 1020



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 138/605 (22%), Positives = 225/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 361 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 416

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 417 NEYGYLLANAF-INVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 474

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    DV++ +      I + 
Sbjct: 475 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPTWIIKQ 532

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 533 PEYAVVQRGGMVSFECKVKHDHTLVLTVLWLKDNEELPNDERFTVDKDHLVVADVSDDDS 592

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 593 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPVPVYDVPNPPFDLELTDQLDKSVQLS 647

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 648 WTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVTAMNS 707

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 708 IGKSLPSEASEQYMTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 766

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 767 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAVVMGHSGE 823

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 824 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQNSPKRNRRHIEKK 883

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 884 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 936

Query: 616 NNLVI 620
           ++L I
Sbjct: 937 SSLKI 941



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 123/300 (41%), Gaps = 38/300 (12%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+ +G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQNGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 EHTHIT--DQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFE 353
             +  +  ++P  +    G +++            C A   P+  +      G  P +  
Sbjct: 238 VISAKSNRERPPTFLTPEGNASSKEELRGNVLLLECIAEGLPTPLIYWAKEDGILPTNRT 297

Query: 354 SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
           S   F +    +L +T  SE DSG Y C A+  L  I    ++ V+     + AP N  L
Sbjct: 298 SYKNFKK----TLQITHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWIMAPQNLVL 353


>gi|403257018|ref|XP_003921135.1| PREDICTED: neuronal cell adhesion molecule isoform 1 [Saimiri
           boliviensis boliviensis]
 gi|56122260|gb|AAV74281.1| neuronal cell adhesion protein [Saimiri boliviensis]
          Length = 1180

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 149/421 (35%), Positives = 213/421 (50%), Gaps = 28/421 (6%)

Query: 24  ISASQNRHAPK-----QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPS 77
           ISA  NR  P      +   + K+E  LR   + L CI  G P P   W+K DG  I P+
Sbjct: 239 ISAKSNRERPPTFLTPEGNASSKEE--LRGNVLLLECIAEGLPTPLIYWAKEDG--ILPT 294

Query: 78  DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINA 137
           +R S  N+ K+L I HV  +D G+Y C   N +G A  ++I + V AAPY+ + P+ +  
Sbjct: 295 NRTSYKNFKKTLQITHVSEADSGNYQCIAKNALG-AIHHTISVRVKAAPYWIMAPQNLVL 353

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  E  T  C+A+G P+P I W+ NG PI  AP +P RK+  + I   N+++  +  Y C
Sbjct: 354 SPGEDGTLICRANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQC 413

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQ 256
           NA+N  GY+  + ++NVLA  P I       Y V   +  +L C  FG+P P + W    
Sbjct: 414 NASNEYGYLLANAFINVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGA 473

Query: 257 K--ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
           K   L    Y + E G L+I       +G YTC ARNKLG A+    L +K+ T I  QP
Sbjct: 474 KGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDPTWIIKQP 533

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           E   V+ G   +F C    D +L L+++WL+ +E  +  ++ RF    D+ L V   S+ 
Sbjct: 534 EYAVVQRGGMVSFECKVKHDHTLVLTVLWLKDNE--ELPNDERFTVDKDH-LVVADVSDD 590

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPS----------NFTLIQVIDAKKAVVSWN 424
           DSG YTC A T LD + A A L+V  P   P           +  L   +D K   +SW 
Sbjct: 591 DSGTYTCVANTTLDSVSASAVLSVVAPTPTPVPVYDVPNPPFDLELTDQLD-KSVQLSWT 649

Query: 425 P 425
           P
Sbjct: 650 P 650



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 159/641 (24%), Positives = 259/641 (40%), Gaps = 68/641 (10%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTC--EVSNGVGEAKSYSIDLSVLAA------PYF 128
           S+R+SQG  G       +    +  Y C    ++     +   I + V++A      P  
Sbjct: 191 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISAKSNRERPPT 250

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGKPISQAPPN-PRRKVGPNRIT 183
            + PE   +++EE     +  EC A GLP P I+W    K     P N    K     + 
Sbjct: 251 FLTPEGNASSKEELRGNVLLLECIAEGLPTPLIYW---AKEDGILPTNRTSYKNFKKTLQ 307

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVF 243
           I ++ ++D+GNY C A N+LG ++  + V V A AP    AP++     G+   L CR  
Sbjct: 308 ITHVSEADSGNYQCIAKNALGAIHHTISVRVKA-APYWIMAPQNLVLSPGEDGTLICRAN 366

Query: 244 GAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSG 300
           G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    + 
Sbjct: 367 GNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANA 426

Query: 301 SLTVKEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF 358
            + V         P +  Y+V A + A   C     P    +I W +G++      E  +
Sbjct: 427 FINVLAEPPRILTPANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIY 483

Query: 359 VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVID 415
           V   + +L +  + +  +G YTC A+ +L   +    L ++ P   ++ P  + ++Q   
Sbjct: 484 VLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDPTWIIKQPE-YAVVQ--- 539

Query: 416 AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
            +  +VS+     +    H     +     KD E       +   E  T + D  V A  
Sbjct: 540 -RGGMVSF-----ECKVKHDHTLVLTVLWLKDNEE------LPNDERFTVDKDHLVVADV 587

Query: 476 NFARVLAFNGAYNG-----PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLK 523
           +      +    N        S ++S V P   P  V  +   P           +  L 
Sbjct: 588 SDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPVPVYDVPNPPFDLELTDQLDKSVQLS 647

Query: 524 WVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
           W   +  N  +  + I+Y+        P L         T T+A+L  L P   Y   + 
Sbjct: 648 WTPGDDNNSPITKFIIEYEDAMHE---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVT 703

Query: 584 GYTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKY 637
                G      A  +Y+     P KNP  VEG GS P+NLVI+W  +   E N P  +Y
Sbjct: 704 AMNSIGKSLPSEASEQYMTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQY 763

Query: 638 RIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           ++ WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 764 KVSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 802



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 98/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  ++     R  I  K
Sbjct: 825  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQNSPKRNRRHIEKK 883

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 884  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 943

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 944  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTQWTLKNL 999

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1000 NFSTRYKFYFYAQTSAGSGSQ 1020



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 138/605 (22%), Positives = 225/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 361 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 416

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 417 NEYGYLLANAF-INVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 474

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    DV++ +      I + 
Sbjct: 475 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPTWIIKQ 532

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 533 PEYAVVQRGGMVSFECKVKHDHTLVLTVLWLKDNEELPNDERFTVDKDHLVVADVSDDDS 592

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 593 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPVPVYDVPNPPFDLELTDQLDKSVQLS 647

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 648 WTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVTAMNS 707

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 708 IGKSLPSEASEQYMTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 766

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 767 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAVVMGHSGE 823

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 824 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQNSPKRNRRHIEKK 883

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 884 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 936

Query: 616 NNLVI 620
           ++L I
Sbjct: 937 SSLKI 941



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 123/300 (41%), Gaps = 38/300 (12%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+ +G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQNGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 EHTHIT--DQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFE 353
             +  +  ++P  +    G +++            C A   P+  +      G  P +  
Sbjct: 238 VISAKSNRERPPTFLTPEGNASSKEELRGNVLLLECIAEGLPTPLIYWAKEDGILPTNRT 297

Query: 354 SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
           S   F +    +L +T  SE DSG Y C A+  L  I    ++ V+     + AP N  L
Sbjct: 298 SYKNFKK----TLQITHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWIMAPQNLVL 353


>gi|403257020|ref|XP_003921136.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Saimiri
           boliviensis boliviensis]
          Length = 1183

 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 140/384 (36%), Positives = 201/384 (52%), Gaps = 11/384 (2%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  I P++R S  N+ K+L I HV  +D G+Y C
Sbjct: 277 LRGNVLLLECIAEGLPTPLIYWAKEDG--ILPTNRTSYKNFKKTLQITHVSEADSGNYQC 334

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+ + P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 335 IAKNALG-AIHHTISVRVKAAPYWIMAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 393

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + ++NVLA  P I   
Sbjct: 394 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFINVLAEPPRILTP 453

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 454 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 513

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 514 TGTYTCVARNKLGMAKNDVHLEIKDPTWIIKQPEYAVVQRGGMVSFECKVKHDHTLVLTV 573

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +E  +  ++ RF    D+ L V   S+ DSG YTC A T LD + A A L+V   
Sbjct: 574 LWLKDNE--ELPNDERFTVDKDH-LVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDV 630

Query: 402 LEAPSNFTLIQVIDAKKAVVSWNP 425
              P +  L   +D K   +SW P
Sbjct: 631 PNPPFDLELTDQLD-KSVQLSWTP 653



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 147/573 (25%), Positives = 236/573 (41%), Gaps = 56/573 (9%)

Query: 130 VEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGKPISQAPPN-PRRKVGPNRITI 184
           + PE   +++EE     +  EC A GLP P I+W    K     P N    K     + I
Sbjct: 265 LTPEGNASSKEELRGNVLLLECIAEGLPTPLIYW---AKEDGILPTNRTSYKNFKKTLQI 321

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFG 244
            ++ ++D+GNY C A N+LG ++  + V V A AP    AP++     G+   L CR  G
Sbjct: 322 THVSEADSGNYQCIAKNALGAIHHTISVRVKA-APYWIMAPQNLVLSPGEDGTLICRANG 380

Query: 245 APKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGS 301
            PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    +  
Sbjct: 381 NPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAF 440

Query: 302 LTVKEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFV 359
           + V         P +  Y+V A + A   C     P    +I W +G++      E  +V
Sbjct: 441 INVLAEPPRILTPANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYV 497

Query: 360 QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA 416
              + +L +  + +  +G YTC A+ +L   +    L ++ P   ++ P  + ++Q    
Sbjct: 498 LHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDPTWIIKQPE-YAVVQ---- 552

Query: 417 KKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
           +  +VS+     +    H     +     KD E       +   E  T + D  V A  +
Sbjct: 553 RGGMVSF-----ECKVKHDHTLVLTVLWLKDNEE------LPNDERFTVDKDHLVVADVS 601

Query: 477 FARVLAFNGAYNG-----PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPN 531
                 +    N        S ++S V    VP     LE       +  L W   +  N
Sbjct: 602 DDDSGTYTCVANTTLDSVSASAVLSVV---DVPNPPFDLELTDQLDKSVQLSWTPGDDNN 658

Query: 532 GVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             +  + I+Y+        P L         T T+A+L  L P   Y   +      G  
Sbjct: 659 SPITKFIIEYEDAMHE---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVTAMNSIGKS 714

Query: 592 ----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
               A  +Y+     P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +
Sbjct: 715 LPSEASEQYMTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKD 774

Query: 646 TGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
             + W    V+    S+ +++  PTF PY IKV
Sbjct: 775 GDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 805



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 98/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  ++     R  I  K
Sbjct: 828  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQNSPKRNRRHIEKK 886

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 887  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 946

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 947  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIP----ANKTQWTLKNL 1002

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1003 NFSTRYKFYFYAQTSAGSGSQ 1023



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 142/605 (23%), Positives = 231/605 (38%), Gaps = 71/605 (11%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 374 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 429

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 430 NEYGYLLANAF-INVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 487

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    DV++ +      I + 
Sbjct: 488 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPTWIIKQ 545

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 546 PEYAVVQRGGMVSFECKVKHDHTLVLTVLWLKDNEELPNDERFTVDKDHLVVADVSDDDS 605

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V +   + + P D E+              D S++LS  
Sbjct: 606 GTYTCVANTTLDSVSASAVLSVVD---VPNPPFDLELTDQL----------DKSVQLS-- 650

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 651 WTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVTAMNS 710

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 711 IGKSLPSEASEQYMTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 769

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 770 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAVVMGHSGE 826

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 827 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQNSPKRNRRHIEKK 886

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 887 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 939

Query: 616 NNLVI 620
           ++L I
Sbjct: 940 SSLKI 944



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 133/344 (38%), Gaps = 57/344 (16%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNG-------K 164
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  ISALEVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKD 86

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDT--GNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           P+    P      G   I I +  K++T  G Y C A N  G    +  V   + +P  T
Sbjct: 87  PLVTMKPG----TGTLIINIMSEGKAETYEGVYQCTARNERGAAISNNIVVRPSRSPLWT 142

Query: 223 EAPKDEYTV-DGKTVVLTCRVFGAPKPEVN-WIHN--QKELTGGRYTILETGDLKITDVA 278
           +   +  T+ +G+++VL CR      P +  W+ N  Q+     R +    GDL  ++V 
Sbjct: 143 KEKLEPITLQNGQSLVLPCRPPIGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVL 202

Query: 279 FADSGE-YTCFAR-NKLGTAQGSGSLTVKE------HTHITDQPEDYEVEAGQSATFR-- 328
             D+ E Y C+AR N   T Q    ++VK       +  I     D E    +S   R  
Sbjct: 203 PEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFYGAKSNRERPP 262

Query: 329 ------CNAVSDPSLKLSIVWLRG------SEPIDFESEPRFVQSNDYS-------LTVT 369
                  NA S   L+ +++ L        +  I +  E   + +N  S       L +T
Sbjct: 263 TFLTPEGNASSKEELRGNVLLLECIAEGLPTPLIYWAKEDGILPTNRTSYKNFKKTLQIT 322

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             SE DSG Y C A+  L  I    ++ V+     + AP N  L
Sbjct: 323 HVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWIMAPQNLVL 366


>gi|410902571|ref|XP_003964767.1| PREDICTED: protein sidekick-2-like [Takifugu rubripes]
          Length = 2173

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 191/617 (30%), Positives = 277/617 (44%), Gaps = 46/617 (7%)

Query: 32  APKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT--IWSKDGVPINPSDRISQGNYGKSL 89
           +PK   VT  +  A+      + C+    PL +    W KDGV +N   R    ++G+ L
Sbjct: 201 SPKNTSVTMGRNEAI------MECVANARPLVKMSITWRKDGVMVNTGIR----DFGRRL 250

Query: 90  IIKHVEFSDQGSYTCEVSNGVGEAKSYSID--LSVLAAPYFTVEP-EFINAAEEETVTFE 146
           +I     SD G Y CE S     A   S    L VL  P F  EP   I+A  E+ V   
Sbjct: 251 VISLPMVSDSGYYECEASLRSSSAPPVSAGAFLHVLEYPLFVKEPPSHISAEMEKVVDIP 310

Query: 147 CKASGLPEPEIHWVHNGKPISQAP-PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGY 205
           C+A G P+P+I W  +  PIS    P  R  VG   + I  L   DTG + C A N  G 
Sbjct: 311 CQARGTPQPDIVWYKDAVPISPVKIPRYRVLVG-GSLQINGLLPDDTGMFQCFARNLAGE 369

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +  + Y+ V + AP IT  P D   +DG +V+L C   GAP+P + W   ++ L  G   
Sbjct: 370 IQTNTYLAVTSIAPNITAGPADSAVIDGTSVILHCETSGAPRPAITWQKGERVLASGSVQ 429

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R+T+LE+G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V 
Sbjct: 430 LPRFTLLESGSLLISPSHLSDAGTYTCMASNSRGIDEASADLLVWARTRITKPPQDQSVI 489

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
            G  A   C    DPS+ +  VW +    ID  + PR     D +L ++++   D G YT
Sbjct: 490 KGTKAVMTCGVTRDPSVTVRHVWEKSGSAIDVNTSPRLRLDPDGTLHISQTWSGDIGTYT 549

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV-VSWNPVSPQSLRGH--FRG 437
           CR  +        A L V+    AP N   +     K+A+ ++W     Q+  G+     
Sbjct: 550 CRVTSVGGNDSRSAHLRVRQLPHAPENPIAVLSATEKRAINLTWA----QAFDGNSPLIR 605

Query: 438 YKVQTWTEKDGEGSIRELIVN-KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EII 495
           Y ++  +E +   ++  L+ N + EST   V   +PA     R+ A N    G  S E  
Sbjct: 606 YILEV-SENNAPWTV--LLANIEPESTGVTVGGLIPARSYQFRLCAVNDVGRGQFSKETD 662

Query: 496 SFVTPEGVPGT-VQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPL 552
               PE  P    Q++ A    + +  ++W  P +   NG L GY I+Y  + G    P+
Sbjct: 663 RLTLPEEPPSAPPQTVIASGRTNQSIMIQWQPPPESHQNGPLQGYIIRY-CLSGL---PV 718

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDN 607
             ++  I++P  TS  L  L   T Y I +A Y  AG G  S       L  VP   P N
Sbjct: 719 DCQMKNITNPDQTSLLLEDLIIWTNYEIEVAAYNGAGRGTYSHKVTEWTLQGVPTVPPGN 778

Query: 608 VEGRGSTPNNLVISWTA 624
           V+        + ++W+A
Sbjct: 779 VQAEAVNSTTVRLTWSA 795



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 164/654 (25%), Positives = 252/654 (38%), Gaps = 63/654 (9%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE-VSNGVGEAK-SYSI 118
           P PQ  W +DG  I  S RI+      +L+I      D G Y  + V++  GE K S  +
Sbjct: 122 PRPQITWFRDGRKIPSSSRIAI-TLDNTLVILSTVAPDAGRYYAQAVNDKNGENKTSQPV 180

Query: 119 DLSV--LAAPYFTVEPEFINAAEEETVT-------FECKASGLP--EPEIHWVHNGKPIS 167
            L+V  +  P   + P  I + +  +VT        EC A+  P  +  I W  +G  ++
Sbjct: 181 VLTVENVGGPADPIAPSIIISPKNTSVTMGRNEAIMECVANARPLVKMSITWRKDGVMVN 240

Query: 168 QAPPNPRRKVGPNRITIENLRKSDTGNYGCNA---TNSLGYVYKDVYVNVLAHAPEITEA 224
                  R  G  R+ I     SD+G Y C A   ++S   V    +++VL +   + E 
Sbjct: 241 TG----IRDFG-RRLVISLPMVSDSGYYECEASLRSSSAPPVSAGAFLHVLEYPLFVKEP 295

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG---GRYTILETGDLKITDVAFAD 281
           P        K V + C+  G P+P++ W  +   ++     RY +L  G L+I  +   D
Sbjct: 296 PSHISAEMEKVVDIPCQARGTPQPDIVWYKDAVPISPVKIPRYRVLVGGSLQINGLLPDD 355

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKE-HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           +G + CFARN  G  Q +  L V     +IT  P D  V  G S    C     P  + +
Sbjct: 356 TGMFQCFARNLAGEIQTNTYLAVTSIAPNITAGPADSAVIDGTSVILHCETSGAP--RPA 413

Query: 341 IVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W +G   +   S   PRF      SL ++ S   D+G YTC A       EA A L V
Sbjct: 414 ITWQKGERVLASGSVQLPRFTLLESGSLLISPSHLSDAGTYTCMASNSRGIDEASADLLV 473

Query: 399 QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVN 458
                         VI   KAV++       S+        V+   EK G      + VN
Sbjct: 474 WARTRITKPPQDQSVIKGTKAVMTCGVTRDPSV-------TVRHVWEKSGSA----IDVN 522

Query: 459 KGESTTTEVDKFVPASKNFA--------RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSL 510
                  + D  +  S+ ++        RV +  G  +   + +     P      +  L
Sbjct: 523 TSPRLRLDPDGTLHISQTWSGDIGTYTCRVTSVGGN-DSRSAHLRVRQLPHAPENPIAVL 581

Query: 511 EAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
            A      A  L W +    N  L+ Y ++  S        LL  +    +P +T   + 
Sbjct: 582 SAT--EKRAINLTWAQAFDGNSPLIRYILEV-SENNAPWTVLLANI----EPESTGVTVG 634

Query: 571 GLEPSTKYRIHLAGYTKAGDGAESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTA 624
           GL P+  Y+  L      G G  SK    +      P   P  V   G T  +++I W  
Sbjct: 635 GLIPARSYQFRLCAVNDVGRGQFSKETDRLTLPEEPPSAPPQTVIASGRTNQSIMIQWQP 694

Query: 625 MPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            PE   N P   Y I +            ++ +  Q+ L+L +   +  YEI+V
Sbjct: 695 PPESHQNGPLQGYIIRYCLSGLPVDCQMKNITNPDQTSLLLEDLIIWTNYEIEV 748



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 142/583 (24%), Positives = 226/583 (38%), Gaps = 60/583 (10%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEV 106
           V L C   G P P   W K G  +  S  +    +      SL+I     SD G+YTC  
Sbjct: 400 VILHCETSGAPRPAITWQK-GERVLASGSVQLPRFTLLESGSLLISPSHLSDAGTYTCMA 458

Query: 107 SN--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--WVHN 162
           SN  G+ EA   S DL V A    T  P+  +  +       C  +  P   +   W  +
Sbjct: 459 SNSRGIDEA---SADLLVWARTRITKPPQDQSVIKGTKAVMTCGVTRDPSVTVRHVWEKS 515

Query: 163 GKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAP 219
           G  I     +PR ++ P+  + I      D G Y C  T+  G   +  ++ V  L HAP
Sbjct: 516 GSAI-DVNTSPRLRLDPDGTLHISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQLPHAP 574

Query: 220 EITEAPKDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTIL------ETGDL 272
           E   A       + + + LT  + F    P + +I    E     +T+L      E+  +
Sbjct: 575 ENPIAVLS--ATEKRAINLTWAQAFDGNSPLIRYILEVSE-NNAPWTVLLANIEPESTGV 631

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS--ATFRCN 330
            +  +  A S ++   A N +G  Q S     KE   +T  PE+      Q+  A+ R N
Sbjct: 632 TVGGLIPARSYQFRLCAVNDVGRGQFS-----KETDRLT-LPEEPPSAPPQTVIASGRTN 685

Query: 331 AV-------------SDPSLKLSIVWLRGSEPIDFE----SEPRFVQSNDYSLTVTKSSE 373
                          + P     I +     P+D +    + P         L +  + E
Sbjct: 686 QSIMIQWQPPPESHQNGPLQGYIIRYCLSGLPVDCQMKNITNPDQTSLLLEDLIIWTNYE 745

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRG 433
           ++   Y    +        + TL   VP   P N    + +++    ++W+  SPQ + G
Sbjct: 746 IEVAAYNGAGRGTYSHKVTEWTLQ-GVPTVPPGNVQ-AEAVNSTTVRLTWSAPSPQFING 803

Query: 434 HFRGYKVQTWT-EKDGEGSIRELIVNKGESTTT-EVDKFVPASKNFARVLAFNGAYNGPP 491
             +GYK+  W   +  E S+  +  N  +S     V      +  +A VL F    +GP 
Sbjct: 804 INQGYKLLAWEPSRPSEVSMVTVRPNFQDSVHLGHVSGLKKFTDYYASVLCFTTPGDGPR 863

Query: 492 SEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP 551
           S    F T E  PG V  L    +  ++  + W +P++ NG+L GY+I ++    T    
Sbjct: 864 SPPQRFRTHEDTPGAVGHLSFTDILDTSLKVSWKEPQEKNGLLTGYRISWEEFNRTNT-- 921

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
              R+ +    +T   K+ GL   T Y I +A  T  G G  S
Sbjct: 922 ---RVTHYLPNSTQEYKVTGLTALTTYTIQVAAMTSKGQGQLS 961



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/273 (21%), Positives = 103/273 (37%), Gaps = 27/273 (9%)

Query: 126 PYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
           PYF +EP       E   +   C A G    E  W++NG  ++       R     R  I
Sbjct: 7   PYFKMEPPQTQVHLERNRLVLTCMAEGSWPLEFKWLYNGSELT-------RFSLEYRYLI 59

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RVF 243
            +L ++  GNY C   N +G + +      +A+     E  + +    G   ++    + 
Sbjct: 60  PSLDRAHAGNYRCIVRNRVGAIMQVTTEVQVAYMGGFVEGERSQTVSQGDGALIKAPHIH 119

Query: 244 GAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARNK---------- 292
             P+P++ W  + +++ +  R  I     L I      D+G Y   A N           
Sbjct: 120 SFPRPQITWFRDGRKIPSSSRIAITLDNTLVILSTVAPDAGRYYAQAVNDKNGENKTSQP 179

Query: 293 -LGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEPI 350
            + T +  G         I   P++  V  G++ A   C A + P +K+SI W +    +
Sbjct: 180 VVLTVENVGGPADPIAPSIIISPKNTSVTMGRNEAIMECVANARPLVKMSITWRKDGVMV 239

Query: 351 DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +       ++     L ++     DSG Y C A
Sbjct: 240 NTG-----IRDFGRRLVISLPMVSDSGYYECEA 267



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 6/145 (4%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW--TEKDGEGSIRELIV 457
            VP   P N  ++Q   A +  V W+P    +  G  +GYKV  W    ++    +R L +
Sbjct: 1603 VPTSPPLNV-MVQSSTATQLDVMWDPPPLDAQNGDIQGYKVYFWEYQLRNETERLRTLFL 1661

Query: 458  NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS 517
             +      ++      +     V AFN A +GP S      T +  P     +    L +
Sbjct: 1662 PE---LGVKLKNLTGYTTYMISVAAFNAAGDGPRSLPTRGRTQQAAPSAPSFIHFSELTT 1718

Query: 518  SAFYLKWVKPEQPNGVLMGYKIKYQ 542
            ++  + W +P+Q NG++ GY++ Y+
Sbjct: 1719 TSVNVSWGEPKQANGIIEGYRLVYE 1743



 Score = 46.6 bits (109), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 68/299 (22%), Positives = 125/299 (41%), Gaps = 43/299 (14%)

Query: 379  YTCRAQTELDFIEAQATLTVQVPLEA---PSNFTLI--QVIDAKKAVVSWNP----VSPQ 429
            +   AQT   + EA   L V     A   P++  ++  + + A++ ++SW P    +SP 
Sbjct: 1354 FRLTAQTRKGWGEAAEALVVTTEKRARPQPTSRPVVPQEEVQARRVLLSWEPGSDGLSP- 1412

Query: 430  SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
                  R Y VQ+    D   ++    V+  E+ +  V +  P +    RV A N   + 
Sbjct: 1413 -----VRYYTVQSRELPDNNWTVHSASVSH-ETHSYIVTRLKPFTSYQFRVKATNDIGDS 1466

Query: 490  PPS-EIISFVTPEGVPGTVQSLEAI-PLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVK 545
              S E  +  T +  P    ++ ++ P  +++  ++W  P +   NGVL+G++++Y+ + 
Sbjct: 1467 EYSQESETITTLQDAPDRAPTILSVTPHTTTSVLVRWQPPSEDHINGVLLGFRVRYRELH 1526

Query: 546  GTKVGPLLER-----------------LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
              ++     R                 +  +S+ + T  +L  L    +Y I L+ Y   
Sbjct: 1527 YDRLRTFTVRTVNSPSSHWADLTALYSVRNLSESSLTQYELDNLSKHKRYEIRLSVYNAV 1586

Query: 589  GDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI-FW 641
            G+G  S  + +F    VP   P NV  + ST   L + W   P    N     Y++ FW
Sbjct: 1587 GEGPISAPQEVFVGEAVPTSPPLNVMVQSSTATQLDVMWDPPPLDAQNGDIQGYKVYFW 1645



 Score = 42.4 bits (98), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N +      +   +V W  V      G   GYKV  + EKD + +     V  
Sbjct: 1179 VPTSGPANVSAFATT-SSSILVRWGEVLHTDRNGLILGYKV-VYKEKDSDTAPGFWSVEG 1236

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-IISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G  S   I   T + VPG    +    + ++
Sbjct: 1237 NTSHSVQLTGLGKYVLYEIQVLAFTRIGDGRSSSPSILERTLDDVPGPPVGILFPEVRTT 1296

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P QPNG+++ Y+I Y+          ++ L     P+       GL+    Y
Sbjct: 1297 SVRLIWQPPAQPNGIILAYQITYRRNSSNINAATVDVL----SPSARQYTATGLKAELVY 1352

Query: 579  RIHLAGYTKAGDGAESKYL 597
               L   T+ G G  ++ L
Sbjct: 1353 VFRLTAQTRKGWGEAAEAL 1371



 Score = 42.4 bits (98), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 99/269 (36%), Gaps = 43/269 (15%)

Query: 359  VQSNDYSLTVTKSSELDSGQYTCRAQTEL-DFIEAQATLTVQVPLEAPSNFTLIQVID-- 415
            V    +S  VT+     S Q+  +A  ++ D   +Q + T+    +AP     I  +   
Sbjct: 1435 VSHETHSYIVTRLKPFTSYQFRVKATNDIGDSEYSQESETITTLQDAPDRAPTILSVTPH 1494

Query: 416  -AKKAVVSWNPVSPQSLRGHFRGYKVQ----------------------TWTEKDGEGSI 452
                 +V W P S   + G   G++V+                       W +     S+
Sbjct: 1495 TTTSVLVRWQPPSEDHINGVLLGFRVRYRELHYDRLRTFTVRTVNSPSSHWADLTALYSV 1554

Query: 453  RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA 512
            R L  ++   T  E+D      +   R+  +N    GP S        E VP T   L  
Sbjct: 1555 RNL--SESSLTQYELDNLSKHKRYEIRLSVYNAVGEGPISAPQEVFVGEAVP-TSPPLNV 1611

Query: 513  IPLGSSAFYLK--WVKP--EQPNGVLMGYKI---KYQSVKGTKVGPLLERLPYISDPTTT 565
            +   S+A  L   W  P  +  NG + GYK+   +YQ    T      ERL  +  P   
Sbjct: 1612 MVQSSTATQLDVMWDPPPLDAQNGDIQGYKVYFWEYQLRNET------ERLRTLFLPEL- 1664

Query: 566  SAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
              KL  L   T Y I +A +  AGDG  S
Sbjct: 1665 GVKLKNLTGYTTYMISVAAFNAAGDGPRS 1693


>gi|322789026|gb|EFZ14484.1| hypothetical protein SINV_07406 [Solenopsis invicta]
          Length = 779

 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 112/214 (52%), Positives = 143/214 (66%), Gaps = 4/214 (1%)

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKI 274
           + H P IT++P D  TVDGK + +TCRVFG PKPEV W+ +  ELTG RY IL+ GDL+I
Sbjct: 20  IIHVPNITQSPSDLSTVDGKIIQITCRVFGTPKPEVKWVKDGLELTGSRYKILDVGDLEI 79

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS--ATFRCNAV 332
            +V F D+G YTC+A N  G    S  LTVKEHT ITD+PEDYEV  G +  A FRC A+
Sbjct: 80  ENVTFQDAGIYTCYASNIFGEVNASACLTVKEHTKITDEPEDYEVARGSNSIAKFRCKAI 139

Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
           +DP+L L+I WL   EPIDF+ +PRF+Q N Y+L +   +ELDSG YTC A+T+LD + A
Sbjct: 140 ADPTLPLTIDWLSNGEPIDFKKQPRFIQINKYTLIIIGITELDSGVYTCIARTDLDEVRA 199

Query: 393 QATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPV 426
           QATL VQ    AP   +     +   A+V W P+
Sbjct: 200 QATLMVQTVPNAPRLVS--TKCNPNSAIVEWIPM 231



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/281 (38%), Positives = 161/281 (57%), Gaps = 14/281 (4%)

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
           VPL+AP NFTL ++     A +SW+PV  +++RG  +GYK+QTWT+KDGE  +RE+ +  
Sbjct: 472 VPLQAPDNFTLNEIKSGTTAQLSWSPVPEETVRGELQGYKIQTWTDKDGEEGMREIDIRG 531

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
           G+ T   + +FVP SKNFAR+LA+NG Y GP S+ +SF  PEGVPG V   + + +GSSA
Sbjct: 532 GDKTHALIAEFVPYSKNFARILAYNGGYAGPASDTLSFDMPEGVPGRVLDFKVLNMGSSA 591

Query: 520 FYLKWVKPEQPNGVLMGYKIKYQ-SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +LKW +P + NG+L GYKI+ Q S K T    LLE  P++ D   TS KL+ L P+T Y
Sbjct: 592 LFLKWTRPAETNGILTGYKIRCQVSNKVTDEETLLETKPHVVDAQATSTKLSALIPATLY 651

Query: 579 RIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
            + ++  T+ G+G  S  +             R   P+    +W A+ ++EH   +   R
Sbjct: 652 IVTISATTRIGEGIYSMIV---------RSTWRPHRPDIPRFTWEAV-QVEHG--YSNVR 699

Query: 639 IFWRRHNTGEAWNQDDV-LDWRQSELVLANQPTFQPYEIKV 678
           + W  +  G   +   V    +   + L  +P FQ   I++
Sbjct: 700 VIWLPNLYGNPGSYFFVKYKLKGETIFLETKPEFQSTHIEI 740



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 100/205 (48%), Gaps = 63/205 (30%)

Query: 600 VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW--------- 650
           VP+KNPDNV G+G+TP NLVISWT M EIEHN P F Y+IF++R   GE W         
Sbjct: 370 VPYKNPDNVMGKGTTPQNLVISWTTMQEIEHNGPKFLYKIFYKRDIPGENWVTVDVHDWK 429

Query: 651 -------NQ-----------------------DDVLDWRQSELVLANQPTFQPYEIKV-- 678
                  NQ                       D+V+ +   ++ L     F   EIK   
Sbjct: 430 KNNVVVENQPTYQKYRIKVVAINEKGECRIPADEVIGYSGEDVPLQAPDNFTLNEIKSGT 489

Query: 679 ----------------------VQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 716
                                 +QTWT+KDGE  +RE+ +  G+ T   + +FVP SKNF
Sbjct: 490 TAQLSWSPVPEETVRGELQGYKIQTWTDKDGEEGMREIDIRGGDKTHALIAEFVPYSKNF 549

Query: 717 ARVLAFNGAYNGPPSEIISFVTPEG 741
           AR+LA+NG Y GP S+ +SF  PEG
Sbjct: 550 ARILAYNGGYAGPASDTLSFDMPEG 574



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 47/82 (57%), Gaps = 6/82 (7%)

Query: 572 LEPSTKYRIHLAGYTKAGDGAESKYLFY------VPFKNPDNVEGRGSTPNNLVISWTAM 625
           + P   Y  H+    K G    S +         VP+KNPDNV G+G+TP NLVISWT M
Sbjct: 272 MSPWANYTFHVLALNKIGLSLPSPHGDVCTTEADVPYKNPDNVMGKGTTPQNLVISWTTM 331

Query: 626 PEIEHNAPHFKYRIFWRRHNTG 647
            EIEHN P F Y+IF++R   G
Sbjct: 332 QEIEHNGPKFLYKIFYKRDIPG 353



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 13/193 (6%)

Query: 121 SVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV-GP 179
           +++  P  T  P  ++  + + +   C+  G P+PE+ WV +G  ++ +    R K+   
Sbjct: 19  AIIHVPNITQSPSDLSTVDGKIIQITCRVFGTPKPEVKWVKDGLELTGS----RYKILDV 74

Query: 180 NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-- 237
             + IEN+   D G Y C A+N  G V     + V  H  +IT+ P+D     G   +  
Sbjct: 75  GDLEIENVTFQDAGIYTCYASNIFGEVNASACLTVKEHT-KITDEPEDYEVARGSNSIAK 133

Query: 238 LTCRVFGAPK--PEVNWIHNQKEL---TGGRYTILETGDLKITDVAFADSGEYTCFARNK 292
             C+    P     ++W+ N + +      R+  +    L I  +   DSG YTC AR  
Sbjct: 134 FRCKAIADPTLPLTIDWLSNGEPIDFKKQPRFIQINKYTLIIIGITELDSGVYTCIARTD 193

Query: 293 LGTAQGSGSLTVK 305
           L   +   +L V+
Sbjct: 194 LDEVRAQATLMVQ 206



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 79/179 (44%), Gaps = 9/179 (5%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           K +++ C   GTP P+  W KDG+ +  S R    + G  L I++V F D G YTC  SN
Sbjct: 39  KIIQITCRVFGTPKPEVKWVKDGLELTGS-RYKILDVG-DLEIENVTFQDAGIYTCYASN 96

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEPEFINAAE--EETVTFECKASGLPE--PEIHWVHNGK 164
             GE  + S  L+V      T EPE    A        F CKA   P     I W+ NG+
Sbjct: 97  IFGEVNA-SACLTVKEHTKITDEPEDYEVARGSNSIAKFRCKAIADPTLPLTIDWLSNGE 155

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD--VYVNVLAHAPEI 221
           PI         ++    + I  + + D+G Y C A   L  V     + V  + +AP +
Sbjct: 156 PIDFKKQPRFIQINKYTLIIIGITELDSGVYTCIARTDLDEVRAQATLMVQTVPNAPRL 214


>gi|390466863|ref|XP_002751796.2| PREDICTED: neuronal cell adhesion molecule isoform 1 [Callithrix
           jacchus]
          Length = 1211

 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 143/394 (36%), Positives = 202/394 (51%), Gaps = 21/394 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  I P++R S  N+ K+L I HV  +D G+Y C
Sbjct: 283 LRGNVLLLECIAEGLPTPLIYWAKEDG--ILPTNRTSYKNFKKTLQITHVSEADSGNYQC 340

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+ + P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 341 IAKNALG-AIHHTISVRVKAAPYWIMAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 399

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 400 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 459

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 460 ANTLYQVITNRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 519

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 520 TGTYTCVARNKLGMAKNDVHLEIKDPTWIIKQPEYAVVQRGGMVSFECKVKHDHTLVLTV 579

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +E  +  S+ RF    D+ L V   S+ DSG YTC A T LD + A A L+V  P
Sbjct: 580 LWLKDNE--ELPSDERFTVDKDH-LVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAP 636

Query: 402 LEAPS----------NFTLIQVIDAKKAVVSWNP 425
              P           +  L   +D K   +SW P
Sbjct: 637 TPTPVPVYDVPNPPFDLELTDQLD-KSVQLSWTP 669



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 143/563 (25%), Positives = 228/563 (40%), Gaps = 56/563 (9%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPN-PRRKVGPNRITIENLRKSDTGNYGCNATN 201
           +  EC A GLP P I+W    K     P N    K     + I ++ ++D+GNY C A N
Sbjct: 288 LLLECIAEGLPTPLIYW---AKEDGILPTNRTSYKNFKKTLQITHVSEADSGNYQCIAKN 344

Query: 202 SLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QKEL 259
           +LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    E+
Sbjct: 345 ALGAIHHTISVRVKA-APYWIMAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPIEI 403

Query: 260 TGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED-- 316
                +    GD  I ++V    S  Y C A N+ G    +  + V         P +  
Sbjct: 404 APDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPANTL 463

Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
           Y+V   + A   C     P    +I W +G++      E  +V   + +L +  + +  +
Sbjct: 464 YQVITNRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKDST 520

Query: 377 GQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRG 433
           G YTC A+ +L   +    L ++ P   ++ P  + ++Q    +  +VS+     +    
Sbjct: 521 GTYTCVARNKLGMAKNDVHLEIKDPTWIIKQPE-YAVVQ----RGGMVSF-----ECKVK 570

Query: 434 HFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG---- 489
           H     +     KD E       +   E  T + D  V A  +      +    N     
Sbjct: 571 HDHTLVLTVLWLKDNEE------LPSDERFTVDKDHLVVADVSDDDSGTYTCVANTTLDS 624

Query: 490 -PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIKY 541
              S ++S V P   P  V  +   P           +  L W   +  N  +  + I+Y
Sbjct: 625 VSASAVLSVVAPTPTPVPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEY 684

Query: 542 QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYL 597
           +        P L         T T+A+L  L P   Y   +      G      A  +YL
Sbjct: 685 EDAMHE---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVTAVNSIGKSLPSEASEQYL 740

Query: 598 FYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDV 655
                P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W    V
Sbjct: 741 TKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS--V 798

Query: 656 LDWRQSELVLANQPTFQPYEIKV 678
           +    S+ +++  PTF PY IKV
Sbjct: 799 VVANVSKYIVSGTPTFVPYLIKV 821



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 98/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  ++     R  I  K
Sbjct: 844  LPMVAPGNVQ-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQNSPKRNRRHIEKK 902

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 903  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDKVFNTPEGVPSAPSSLKIVN 962

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 963  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 1018

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1019 NFSTRYKFYFYAQTSAGSGSQ 1039



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 138/604 (22%), Positives = 226/604 (37%), Gaps = 59/604 (9%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 380 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 436 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVITNRPALLDCAFFGSPLPTIEWFKGAK- 493

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    DV++ +      I + 
Sbjct: 494 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPTWIIKQ 551

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 552 PEYAVVQRGGMVSFECKVKHDHTLVLTVLWLKDNEELPSDERFTVDKDHLVVADVSDDDS 611

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 612 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPVPVYDVPNPPFDLELTDQLDKSVQLS 666

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 667 WTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVTAVNS 726

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 727 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 785

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 786 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAVVMGHSGE 842

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     +++   + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 843 DLPMVAPGNVQVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQNSPKRNRRHIEKK 902

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPN 616
                 + T   L GLEP + Y +++      G+G  S      P K  +  EG  S P+
Sbjct: 903 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPAS------PDKVFNTPEGVPSAPS 956

Query: 617 NLVI 620
           +L I
Sbjct: 957 SLKI 960



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 124/311 (39%), Gaps = 41/311 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS---QAPPNPRRKVGPNRITIENLRKSDT--GNY 195
           E +  +C+A G P P   W  NG        A    +   G   I I +  K++T  G Y
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDALVTMKPGTGTLIINIMSEGKAETYEGVY 121

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVN-WI 253
            C A N  G    +  V   + +P  T+   +  T+ +G+++VL CR      P +  W+
Sbjct: 122 QCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQNGQSLVLPCRPPIGLPPPIIFWM 181

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVKE--- 306
            N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK    
Sbjct: 182 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISV 241

Query: 307 ---HTHITDQPEDYEVEAGQSATFR--------CNAVSDPSLKLSIVWLRG------SEP 349
              +  I     D E    +S   R         NA +   L+ +++ L        +  
Sbjct: 242 DELNDTIAANLSDTEFYGAKSNRERPPTFLTPEGNASNKEELRGNVLLLECIAEGLPTPL 301

Query: 350 IDFESEPRFVQSNDYS-------LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP- 401
           I +  E   + +N  S       L +T  SE DSG Y C A+  L  I    ++ V+   
Sbjct: 302 IYWAKEDGILPTNRTSYKNFKKTLQITHVSEADSGNYQCIAKNALGAIHHTISVRVKAAP 361

Query: 402 --LEAPSNFTL 410
             + AP N  L
Sbjct: 362 YWIMAPQNLVL 372


>gi|354478085|ref|XP_003501246.1| PREDICTED: neurofascin isoform 4 [Cricetulus griseus]
          Length = 1169

 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 137/391 (35%), Positives = 202/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 263 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKTKFENFNKALRITNVSEED 321

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 322 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 380

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 381 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 440

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 441 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 499

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED  V+ G +    C    D
Sbjct: 500 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVVKRGTTVQLECRVKHD 559

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 560 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKA 616

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 617 YLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 646



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 156/671 (23%), Positives = 258/671 (38%), Gaps = 85/671 (12%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 220 KNPFTLKV-LTNNPYNDSSLRNHPDIYSARGVSERTPSFMYPQGTSSSQMVLRGMDLLLE 278

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 279 CIASGVPTPDIAWYKKGGDL---PSDKTKFENFNKALRITNVSEEDSGEYFCLASNKMGS 335

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 336 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 394

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 395 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 452

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 453 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 511

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   + V     V  +    H    K+
Sbjct: 512 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVVKRGTTVQLECRVKHDPSLKL 564

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII---- 495
             +W + D    I   +  + +S T            F       G+Y    S  +    
Sbjct: 565 TVSWLKDDEPLYIGNRMKKEDDSLTI-----------FGVAERDQGSYTCMASTELDQDL 613

Query: 496 --SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
             +++T  G P   + LE   L   +  L W+  +  N  +  Y I+++  +  + G   
Sbjct: 614 AKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVIQFEEDQ-FQPGVWH 672

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDN 607
           +   +   P + ++ +  L P   Y+  +    + G    S      +     P  NP +
Sbjct: 673 DHSKF---PGSVNSAVLHLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSD 729

Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667
           V+G G+  NN+ I+WT M       P+ +Y + WRR  T E WN  +V  W  S  V+  
Sbjct: 730 VKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQ 786

Query: 668 QPTFQPYEIKV 678
            P + PYEI+V
Sbjct: 787 TPVYVPYEIRV 797



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     T+        P  AP+    I+V+++    + WN V   +++
Sbjct: 793  YEIRVQAENDFGKGPEPDTIIGYSGEDYPRAAPTEVK-IRVMNSTAISLQWNRVYSDTVQ 851

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 852  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVARLFPYSNYKLEMVVVNGRG 911

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY +KY +  GT
Sbjct: 912  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLKYVAFNGT 971

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 972  KLGKQMVENF----SPNQTKFSVQRADPVSRYRFSLSARTQVGSG 1012



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 120/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 230

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 231 NPYNDSSLRNHPDIYSARGVSERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PD 288

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 289 IAWYKKGG--DLPSDKTKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 346

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 347 APYWLDEPKNLIL 359



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 100/251 (39%), Gaps = 47/251 (18%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
              Y+C A+          T T+Q      + FTL         V++ NP +  SLR H 
Sbjct: 202 QTDYSCNARFHF-------THTIQ----QKNPFTL--------KVLTNNPYNDSSLRNHP 242

Query: 436 RGYKVQTWTEK 446
             Y  +  +E+
Sbjct: 243 DIYSARGVSER 253


>gi|390466861|ref|XP_003733663.1| PREDICTED: neuronal cell adhesion molecule [Callithrix jacchus]
          Length = 1304

 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 143/394 (36%), Positives = 202/394 (51%), Gaps = 21/394 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  I P++R S  N+ K+L I HV  +D G+Y C
Sbjct: 283 LRGNVLLLECIAEGLPTPLIYWAKEDG--ILPTNRTSYKNFKKTLQITHVSEADSGNYQC 340

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+ + P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 341 IAKNALG-AIHHTISVRVKAAPYWIMAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 399

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 400 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 459

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 460 ANTLYQVITNRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 519

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 520 TGTYTCVARNKLGMAKNDVHLEIKDPTWIIKQPEYAVVQRGGMVSFECKVKHDHTLVLTV 579

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +E  +  S+ RF    D+ L V   S+ DSG YTC A T LD + A A L+V  P
Sbjct: 580 LWLKDNE--ELPSDERFTVDKDH-LVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAP 636

Query: 402 LEAPS----------NFTLIQVIDAKKAVVSWNP 425
              P           +  L   +D K   +SW P
Sbjct: 637 TPTPVPVYDVPNPPFDLELTDQLD-KSVQLSWTP 669



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 143/563 (25%), Positives = 228/563 (40%), Gaps = 56/563 (9%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPN-PRRKVGPNRITIENLRKSDTGNYGCNATN 201
           +  EC A GLP P I+W    K     P N    K     + I ++ ++D+GNY C A N
Sbjct: 288 LLLECIAEGLPTPLIYW---AKEDGILPTNRTSYKNFKKTLQITHVSEADSGNYQCIAKN 344

Query: 202 SLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK--EL 259
           +LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    E+
Sbjct: 345 ALGAIHHTISVRVKA-APYWIMAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPIEI 403

Query: 260 TGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED-- 316
                +    GD  I ++V    S  Y C A N+ G    +  + V         P +  
Sbjct: 404 APDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPANTL 463

Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
           Y+V   + A   C     P    +I W +G++      E  +V   + +L +  + +  +
Sbjct: 464 YQVITNRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKDST 520

Query: 377 GQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRG 433
           G YTC A+ +L   +    L ++ P   ++ P  + ++Q    +  +VS+     +    
Sbjct: 521 GTYTCVARNKLGMAKNDVHLEIKDPTWIIKQPE-YAVVQ----RGGMVSF-----ECKVK 570

Query: 434 HFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG---- 489
           H     +     KD E       +   E  T + D  V A  +      +    N     
Sbjct: 571 HDHTLVLTVLWLKDNEE------LPSDERFTVDKDHLVVADVSDDDSGTYTCVANTTLDS 624

Query: 490 -PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIKY 541
              S ++S V P   P  V  +   P           +  L W   +  N  +  + I+Y
Sbjct: 625 VSASAVLSVVAPTPTPVPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEY 684

Query: 542 QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYL 597
           +        P L         T T+A+L  L P   Y   +      G      A  +YL
Sbjct: 685 EDAMHE---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVTAVNSIGKSLPSEASEQYL 740

Query: 598 FYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDV 655
                P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W    V
Sbjct: 741 TKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS--V 798

Query: 656 LDWRQSELVLANQPTFQPYEIKV 678
           +    S+ +++  PTF PY IKV
Sbjct: 799 VVANVSKYIVSGTPTFVPYLIKV 821



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 98/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  ++     R  I  K
Sbjct: 844  LPMVAPGNVQ-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQNSPKRNRRHIEKK 902

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 903  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDKVFNTPEGVPSAPSSLKIVN 962

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 963  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIP----ANKTRWTLKNL 1018

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1019 NFSTRYKFYFYAQTSAGSGSQ 1039



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 138/604 (22%), Positives = 226/604 (37%), Gaps = 59/604 (9%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 380 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 436 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVITNRPALLDCAFFGSPLPTIEWFKGAK- 493

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    DV++ +      I + 
Sbjct: 494 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPTWIIKQ 551

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 552 PEYAVVQRGGMVSFECKVKHDHTLVLTVLWLKDNEELPSDERFTVDKDHLVVADVSDDDS 611

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 612 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPVPVYDVPNPPFDLELTDQLDKSVQLS 666

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 667 WTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVTAVNS 726

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 727 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 785

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 786 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAVVMGHSGE 842

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     +++   + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 843 DLPMVAPGNVQVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQNSPKRNRRHIEKK 902

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPN 616
                 + T   L GLEP + Y +++      G+G  S      P K  +  EG  S P+
Sbjct: 903 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPAS------PDKVFNTPEGVPSAPS 956

Query: 617 NLVI 620
           +L I
Sbjct: 957 SLKI 960



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 124/311 (39%), Gaps = 41/311 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS---QAPPNPRRKVGPNRITIENLRKSDT--GNY 195
           E +  +C+A G P P   W  NG        A    +   G   I I +  K++T  G Y
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDALVTMKPGTGTLIINIMSEGKAETYEGVY 121

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVN-WI 253
            C A N  G    +  V   + +P  T+   +  T+ +G+++VL CR      P +  W+
Sbjct: 122 QCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQNGQSLVLPCRPPIGLPPPIIFWM 181

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVKE--- 306
            N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK    
Sbjct: 182 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISV 241

Query: 307 ---HTHITDQPEDYEVEAGQSATFR--------CNAVSDPSLKLSIVWLRG------SEP 349
              +  I     D E    +S   R         NA +   L+ +++ L        +  
Sbjct: 242 DELNDTIAANLSDTEFYGAKSNRERPPTFLTPEGNASNKEELRGNVLLLECIAEGLPTPL 301

Query: 350 IDFESEPRFVQSNDYS-------LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP- 401
           I +  E   + +N  S       L +T  SE DSG Y C A+  L  I    ++ V+   
Sbjct: 302 IYWAKEDGILPTNRTSYKNFKKTLQITHVSEADSGNYQCIAKNALGAIHHTISVRVKAAP 361

Query: 402 --LEAPSNFTL 410
             + AP N  L
Sbjct: 362 YWIMAPQNLVL 372


>gi|332237968|ref|XP_003268176.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Nomascus
           leucogenys]
          Length = 1183

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 166/513 (32%), Positives = 241/513 (46%), Gaps = 26/513 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  + P +R    N+ K+L I HV  +D G+Y C
Sbjct: 277 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIVHVSEADSGNYQC 334

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+   P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 335 IAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 393

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 394 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 453

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 454 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 513

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 514 TGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLTLTV 573

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  S+ RF    D+ L V   S+ DSG YTC A T LD + A A L+V   
Sbjct: 574 LWLKDNR--ELPSDERFTVDRDH-LVVADVSDEDSGTYTCVANTTLDSVSASAVLSVVDV 630

Query: 402 LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGE 461
              P +  L   +D K   +SW P    +       + ++        G         G 
Sbjct: 631 PNPPFDLELTDQLD-KSVQLSWTPGDDNN--SPITKFIIEYEDAMHEPGLWHHQTEVSGT 687

Query: 462 STTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPGTVQSLEAIPLG 516
            TT ++ K  P      RV+A NG     PSE     +     P+  P  V+ L + P  
Sbjct: 688 QTTAQL-KLSPYVNYSFRVMAVNGIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEP-- 744

Query: 517 SSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
                + W KP    + NG  + YK+ ++   G
Sbjct: 745 -DNLVITW-KPLNGFESNGPGLQYKVSWRQKDG 775



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 147/557 (26%), Positives = 233/557 (41%), Gaps = 54/557 (9%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W    K     P N  R V  N    + I ++ ++D+GNY C A
Sbjct: 282 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIVHVSEADSGNYQCIA 336

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK-- 257
            N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 337 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 395

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N+ G    +  + V         P +
Sbjct: 396 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPAN 455

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + + 
Sbjct: 456 TLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKD 512

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVP--LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            +G YTC A+ +L   + +  L ++ P  +     + ++Q    + ++VS+     +   
Sbjct: 513 STGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQ----RGSMVSF-----ECKV 563

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG--- 489
            H     +     KD     REL  +  E  T + D  V A  +      +    N    
Sbjct: 564 KHDHTLTLTVLWLKDN----RELPSD--ERFTVDRDHLVVADVSDEDSGTYTCVANTTLD 617

Query: 490 --PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
               S ++S V    VP     LE       +  L W   +  N  +  + I+Y+     
Sbjct: 618 SVSASAVLSVV---DVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHE 674

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV--P 601
              P L         T T+A+L  L P   Y   +      G      A  +YL     P
Sbjct: 675 ---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNGIGKSLPSEASEQYLTKASEP 730

Query: 602 FKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQS 661
            KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W    V+    S
Sbjct: 731 DKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS--VVVANVS 788

Query: 662 ELVLANQPTFQPYEIKV 678
           + +++  PTF PY IKV
Sbjct: 789 KYIVSGTPTFVPYLIKV 805



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 138/588 (23%), Positives = 236/588 (40%), Gaps = 65/588 (11%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
            + N+   L C F G+PLP   W K        + I   +   +L I   +    G+YTC 
Sbjct: 461  IANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCV 520

Query: 106  VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEIHWVHNG 163
              N +G AK+  + L +    +   +PE+        V+FECK          + W+ + 
Sbjct: 521  ARNKLGMAKN-EVHLEIKDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLTLTVLWLKDN 579

Query: 164  KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--------- 214
            +   + P + R  V  + + + ++   D+G Y C A  +L  V     ++V         
Sbjct: 580  R---ELPSDERFTVDRDHLVVADVSDEDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFD 636

Query: 215  ------LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE 268
                  L  + +++  P D+        ++    +     E    H+Q E++G +     
Sbjct: 637  LELTDQLDKSVQLSWTPGDDNNSPITKFIIE---YEDAMHEPGLWHHQTEVSGTQ----T 689

Query: 269  TGDLKITDVAFADSGEYTCFARNKLGTAQGS---------GSLTVKEHTHIT---DQPED 316
            T  LK++      +  +   A N +G +  S          S   K  T +     +P++
Sbjct: 690  TAQLKLSPYV---NYSFRVMAVNGIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDN 746

Query: 317  YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
              +       F  N    P L+  + W +     ++ S    V +N     V+ +     
Sbjct: 747  LVITWKPLNGFESNG---PGLQYKVSWRQKDGDDEWTS---VVVANVSKYIVSGTPTFVP 800

Query: 377  GQYTCRAQTELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
                 +A  ++ F    A +T      +P+ AP N   + V+++  A V W+PV  +S+R
Sbjct: 801  YLIKVQALNDMGFAPEPAVVTGHSGEDLPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIR 859

Query: 433  GHFRGYKVQTWTEKDGEGSIRELIVNK-----GESTTTEVDKFVPASKNFARVLAFNGAY 487
            GH +GY++  W  +      R  I  K     G  T   +    P S     V   NG  
Sbjct: 860  GHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKG 919

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
             GP S    F TPEGVP    SL+ +     +  L+W  P  PNG+L  Y +KYQ +  T
Sbjct: 920  EGPASPDRVFNTPEGVPSAPSSLKIVNPTLDSLTLEWDPPSHPNGILTEYTLKYQPINST 979

Query: 548  -KVGPLLE-RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
             ++GPL++ ++P       T   L  L  ST+Y+ +    T AG G++
Sbjct: 980  HELGPLVDLKIP----ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQ 1023



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 141/605 (23%), Positives = 231/605 (38%), Gaps = 71/605 (11%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 374 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 429

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 430 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 487

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 488 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIVKQ 545

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 546 PEYAVVQRGSMVSFECKVKHDHTLTLTVLWLKDNRELPSDERFTVDRDHLVVADVSDEDS 605

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V +   + + P D E+              D S++LS  
Sbjct: 606 GTYTCVANTTLDSVSASAVLSVVD---VPNPPFDLELTDQL----------DKSVQLS-- 650

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A   
Sbjct: 651 WTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNG 710

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 711 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 769

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   +++  + E
Sbjct: 770 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDMGFAPEPAVVTGHSGE 826

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 827 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 886

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 887 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 939

Query: 616 NNLVI 620
           ++L I
Sbjct: 940 SSLKI 944



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 134/344 (38%), Gaps = 57/344 (16%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNG-------K 164
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  ISALEVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKD 86

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDT--GNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           P+    P      G   I I +  K++T  G Y C A N  G    +  V   + +P  T
Sbjct: 87  PLVTMKPG----TGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWT 142

Query: 223 EAPKDEYTVD-GKTVVLTCRVFGAPKPEVN-WIHN--QKELTGGRYTILETGDLKITDVA 278
           +   +  T+  G+++VL CR      P +  W+ N  Q+     R +    GDL  ++V 
Sbjct: 143 KEKLEPITLQSGQSLVLPCRPPIGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVL 202

Query: 279 FADSGE-YTCFAR-NKLGTAQGSGSLTVKE------HTHITDQPEDYEVEAGQSATFR-- 328
             D+ E Y C+AR N   T Q    ++VK       +  I     D E    +S+  R  
Sbjct: 203 PEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFYGAKSSRERPP 262

Query: 329 ------CNAVSDPSLKLSIVWLRG-----SEPIDFESEP-------RFVQSN-DYSLTVT 369
                  NA +   L+ +++ L         PI + ++        R V  N + +L + 
Sbjct: 263 TFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQIV 322

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             SE DSG Y C A+  L  I    ++ V+     + AP N  L
Sbjct: 323 HVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLVL 366


>gi|354478081|ref|XP_003501244.1| PREDICTED: neurofascin isoform 2 [Cricetulus griseus]
          Length = 1157

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 137/391 (35%), Positives = 202/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 246 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKTKFENFNKALRITNVSEED 304

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 305 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 363

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 364 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 423

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 424 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 482

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED  V+ G +    C    D
Sbjct: 483 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVVKRGTTVQLECRVKHD 542

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 543 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKA 599

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 600 YLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 629



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 152/654 (23%), Positives = 257/654 (39%), Gaps = 68/654 (10%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAA-----PYFTVEPEFINAAEE----ETVTFECKASGLPEPEIHWVHNG 163
              +++ +          P F + P+  ++++       +  EC ASG+P P+I W   G
Sbjct: 220 KNPFTLKVLTTRGVSERTPSF-MYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKG 278

Query: 164 KPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
             +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP   
Sbjct: 279 GDL---PSDKTKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYWL 334

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDV 277
           + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D 
Sbjct: 335 DEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRDT 392

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
             +    Y C   N+ G    +  ++V +       P +  +        R +     S 
Sbjct: 393 QISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSP 452

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
             ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L 
Sbjct: 453 IPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRLE 511

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIRELI 456
           V+ P       T I  +   + V     V  +    H    K+  +W + D    I   +
Sbjct: 512 VKDP-------TRIYRMPEDQVVKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRM 564

Query: 457 VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII------SFVTPEGVPGTVQSL 510
             + +S T            F       G+Y    S  +      +++T  G P   + L
Sbjct: 565 KKEDDSLTI-----------FGVAERDQGSYTCMASTELDQDLAKAYLTVLGRPDRPRDL 613

Query: 511 EAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
           E   L   +  L W+  +  N  +  Y I+++  +  + G   +   +   P + ++ + 
Sbjct: 614 ELTDLAERSVRLTWIPGDDNNSPITDYVIQFEEDQ-FQPGVWHDHSKF---PGSVNSAVL 669

Query: 571 GLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTA 624
            L P   Y+  +    + G    S      +     P  NP +V+G G+  NN+ I+WT 
Sbjct: 670 HLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTP 729

Query: 625 MPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           M       P+ +Y + WRR  T E WN  +V  W  S  V+   P + PYEI+V
Sbjct: 730 MNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQTPVYVPYEIRV 780



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379 YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           Y  R Q E DF +     T+        P  AP+    I+V+++    + WN V   +++
Sbjct: 776 YEIRVQAENDFGKGPEPDTIIGYSGEDYPRAAPTEVK-IRVMNSTAISLQWNRVYSDTVQ 834

Query: 433 GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
           G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 835 GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVARLFPYSNYKLEMVVVNGRG 894

Query: 488 NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
           +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY +KY +  GT
Sbjct: 895 DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLKYVAFNGT 954

Query: 548 KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 955 KLGKQMVENF----SPNQTKFSVQRADPVSRYRFSLSARTQVGSG 995



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 121/296 (40%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T 
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 230

Query: 310 --ITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             ++++   +    G S++            C A   P+    I W +     D  S+  
Sbjct: 231 RGVSERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKT 286

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 287 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 342



 Score = 46.2 bits (108), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 29/206 (14%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQV 400
              Y+C A+      I+ +   T++V
Sbjct: 202 QTDYSCNARFHFTHTIQQKNPFTLKV 227


>gi|283464051|gb|ADB22609.1| neurofascin [Saccoglossus kowalevskii]
          Length = 577

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 131/370 (35%), Positives = 196/370 (52%), Gaps = 6/370 (1%)

Query: 17  LNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINP 76
            NV    +S +Q R AP   Y      VALR + + + C+    P P   W     P+ P
Sbjct: 211 FNVSVLTLSPAQQR-APVLLYHPELDVVALRGETLSMKCLADAFPTPTVSWEGLTKPL-P 268

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFIN 136
            +R +  ++G+ ++I  V+F D+G Y C  SN +G    +S+ + V AAPY+ ++ +   
Sbjct: 269 EERTTYPSFGQEVLIADVKFEDEGEYRCTASNAIGSPARWSVKVRVEAAPYWAIDHQDET 328

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
                  T EC A G+P P I W+ NG+ I     N RR+V  N+I   N +  D+  Y 
Sbjct: 329 IPPYSDFTMECLAEGIPPPAISWLVNGQTIPNPDTNRRRRVSGNKIHFTNAKADDSDVYQ 388

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKT--VVLTCRVFGAPKPEVNWIH 254
           C A+N+ G +   +Y+NVLA  P   E P  E T+  ++  V + C VFG+PKP V W  
Sbjct: 389 CMASNTHGKIMTSMYLNVLA-VPARIEQPPPELTLATESGEVAIHCGVFGSPKPRVTWSF 447

Query: 255 NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
           N +E++GGRY  LE G L I DV F D G Y C+ARN+ G     G L VK+ T I  +P
Sbjct: 448 NGQEVSGGRYETLENGTLIIQDVGFNDRGLYKCYARNEFGQQTEFGLLYVKKKTEIQQKP 507

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSE 373
            D  V+  ++A F C+A  D S++L+I W R  E +  +    R+  +++ SL + ++  
Sbjct: 508 SDEYVKEDENAQFDCSATYDSSMELTIFWERDGERLQTDLPTSRYSTNSEDSLVIRRTQM 567

Query: 374 LDSGQYTCRA 383
            D+  YTC A
Sbjct: 568 SDTNDYTCVA 577



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 144/348 (41%), Gaps = 22/348 (6%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVG 111
           +L C+  G P P  +W K+G  +  +DR++  + G  +I +  E  D G+Y C  +N  G
Sbjct: 50  QLKCVARGNPTPTYVWKKNGRDVELTDRVTMTD-GTLVIEEPHERLDDGTYQCYANNNYG 108

Query: 112 EAKSYSIDLSVLAAPYFT---VEPEFINAAEEETVTFECKA-SGLPEPEIHWVHNGKPIS 167
            A S  I L V     FT   VE   IN         EC A SG+P+P+I W     P  
Sbjct: 109 TALSNKITLRVGNMGRFTPKEVEQNNINI--NSGAKLECNAPSGIPDPKIFWSLK-LPKV 165

Query: 168 QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSL---GYVYKDVYVNVLAHAPEITEA 224
               N   +     +   N+ +SDT  Y CNA   +     V     V+VL  +P    A
Sbjct: 166 LTYTNRVNQDPEGNLIFSNVVESDTDTYFCNALAEMLGEMRVSPAFNVSVLTLSPAQQRA 225

Query: 225 P-------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETG-DLKITD 276
           P        D   + G+T+ + C     P P V+W    K L   R T    G ++ I D
Sbjct: 226 PVLLYHPELDVVALRGETLSMKCLADAFPTPTVSWEGLTKPLPEERTTYPSFGQEVLIAD 285

Query: 277 VAFADSGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           V F D GEY C A N +G+ A+ S  + V+   +     +D  +      T  C A   P
Sbjct: 286 VKFEDEGEYRCTASNAIGSPARWSVKVRVEAAPYWAIDHQDETIPPYSDFTMECLAEGIP 345

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
              +S  WL   + I      R  + +   +  T +   DS  Y C A
Sbjct: 346 PPAIS--WLVNGQTIPNPDTNRRRRVSGNKIHFTNAKADDSDVYQCMA 391


>gi|354478083|ref|XP_003501245.1| PREDICTED: neurofascin isoform 3 [Cricetulus griseus]
          Length = 1240

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 135/373 (36%), Positives = 194/373 (52%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 252 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKTKFENFNKALRITNVSEED 310

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 311 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 369

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 370 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 429

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 430 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 488

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED  V+ G +    C    D
Sbjct: 489 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVVKRGTTVQLECRVKHD 548

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 549 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKA 605

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 606 YLTVLADQATPTN 618



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 156/665 (23%), Positives = 265/665 (39%), Gaps = 75/665 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 167 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 225

Query: 113 AKSYSIDLSVLAA-----PYFTVEPEFINAAEE----ETVTFECKASGLPEPEIHWVHNG 163
              +++ +          P F + P+  ++++       +  EC ASG+P P+I W   G
Sbjct: 226 KNPFTLKVLTTRGVSERTPSF-MYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKG 284

Query: 164 KPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
             +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP   
Sbjct: 285 GDL---PSDKTKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYWL 340

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDV 277
           + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D 
Sbjct: 341 DEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRDT 398

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
             +    Y C   N+ G    +  ++V +       P +  +        R +     S 
Sbjct: 399 QISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSP 458

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
             ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L 
Sbjct: 459 IPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRLE 517

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIRELI 456
           V+ P       T I  +   + V     V  +    H    K+  +W + D    I   +
Sbjct: 518 VKDP-------TRIYRMPEDQVVKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRM 570

Query: 457 VNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
             + +S T                 TE+D+ +  +K +  VLA       P + + +   
Sbjct: 571 KKEDDSLTIFGVAERDQGSYTCMASTELDQDL--AKAYLTVLADQAT---PTNRLAAL-- 623

Query: 500 PEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
           P+G P   + LE   L   +  L W+  +  N  +  Y I+++  +  + G   +   + 
Sbjct: 624 PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVIQFEEDQ-FQPGVWHDHSKF- 681

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGS 613
             P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G+
Sbjct: 682 --PGSVNSAVLHLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGT 739

Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
             NN+ I+WT M       P+ +Y + WRR  T E WN  +V  W  S  V+   P + P
Sbjct: 740 RKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQTPVYVP 796

Query: 674 YEIKV 678
           YEI+V
Sbjct: 797 YEIRV 801



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 9/172 (5%)

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           ++W P++  S  G    Y V+ W  ++   +   + V        +   +VP      RV
Sbjct: 746 ITWTPMNATSAFGPNLRYIVK-WRRRETRETWNNVTVWGSRYVVGQTPVYVPYE---IRV 801

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
            A N    GP  + I   + E +P   +             L+W  PE PNG+L+GY +K
Sbjct: 802 QAENDFGKGPEPDTIIGYSGEDLPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLK 861

Query: 541 YQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           Y +  GTK+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 862 YVAFNGTKLGKQMVENF----SPNQTKFSVQRADPVSRYRFSLSARTQVGSG 909



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 121/296 (40%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 57  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 116

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 117 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 176

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T 
Sbjct: 177 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 236

Query: 310 --ITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             ++++   +    G S++            C A   P+    I W +     D  S+  
Sbjct: 237 RGVSERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKT 292

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 293 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 348



 Score = 47.4 bits (111), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++  
Sbjct: 35  NELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 94

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
                + D           GEY CFARNK GTA     L+ +    ++  P    E+ + 
Sbjct: 95  RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 149

Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 150 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 205

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
           D    Y+C A+      I+ +   T++V
Sbjct: 206 DMQTDYSCNARFHFTHTIQQKNPFTLKV 233


>gi|354478079|ref|XP_003501243.1| PREDICTED: neurofascin isoform 1 [Cricetulus griseus]
          Length = 1189

 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 135/373 (36%), Positives = 194/373 (52%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 263 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKTKFENFNKALRITNVSEED 321

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 322 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 380

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 381 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 440

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 441 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 499

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED  V+ G +    C    D
Sbjct: 500 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVVKRGTTVQLECRVKHD 559

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 560 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKA 616

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 617 YLTVLADQATPTN 629



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 160/682 (23%), Positives = 266/682 (39%), Gaps = 92/682 (13%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 220 KNPFTLKV-LTNNPYNDSSLRNHPDIYSARGVSERTPSFMYPQGTSSSQMVLRGMDLLLE 278

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 279 CIASGVPTPDIAWYKKGGDL---PSDKTKFENFNKALRITNVSEEDSGEYFCLASNKMGS 335

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 336 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 394

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 395 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 452

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 453 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 511

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   + V     V  +    H    K+
Sbjct: 512 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVVKRGTTVQLECRVKHDPSLKL 564

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTT-----------------TEVDKFVPASKNFARVLA 482
             +W + D    I   +  + +S T                 TE+D+ +  +K +  VLA
Sbjct: 565 TVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQDL--AKAYLTVLA 622

Query: 483 FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
                  P + + +   P+G P   + LE   L   +  L W+  +  N  +  Y I+++
Sbjct: 623 DQAT---PTNRLAAL--PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVIQFE 677

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KY 596
             +  + G   +   +   P + ++ +  L P   Y+  +    + G    S      + 
Sbjct: 678 EDQ-FQPGVWHDHSKF---PGSVNSAVLHLSPYVNYQFRVIAVNEVGSSHPSLPSERYRT 733

Query: 597 LFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVL 656
               P  NP +V+G G+  NN+ I+WT M       P+ +Y + WRR  T E WN  +V 
Sbjct: 734 SGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVT 791

Query: 657 DWRQSELVLANQPTFQPYEIKV 678
            W  S  V+   P + PYEI+V
Sbjct: 792 VW-GSRYVVGQTPVYVPYEIRV 812



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     T+        P  AP+    I+V+++    + WN V   +++
Sbjct: 808  YEIRVQAENDFGKGPEPDTIIGYSGEDYPRAAPTEVK-IRVMNSTAISLQWNRVYSDTVQ 866

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 867  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVARLFPYSNYKLEMVVVNGRG 926

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY +KY +  GT
Sbjct: 927  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLKYVAFNGT 986

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 987  KLGKQMVENF----SPNQTKFSVQRADPVSRYRFSLSARTQVGSG 1027



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 120/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 230

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 231 NPYNDSSLRNHPDIYSARGVSERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PD 288

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 289 IAWYKKGG--DLPSDKTKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 346

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 347 APYWLDEPKNLIL 359



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 100/251 (39%), Gaps = 47/251 (18%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
              Y+C A+          T T+Q      + FTL         V++ NP +  SLR H 
Sbjct: 202 QTDYSCNARFHF-------THTIQ----QKNPFTL--------KVLTNNPYNDSSLRNHP 242

Query: 436 RGYKVQTWTEK 446
             Y  +  +E+
Sbjct: 243 DIYSARGVSER 253


>gi|348525294|ref|XP_003450157.1| PREDICTED: protein sidekick-2-like [Oreochromis niloticus]
          Length = 2209

 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 188/602 (31%), Positives = 271/602 (45%), Gaps = 41/602 (6%)

Query: 47  RNKKVELFCIFGGTPLPQT--IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           RN+ + + C+    PL +    W KDG  +N   R    ++G+ L+I     SD G Y C
Sbjct: 242 RNEAI-MECVANARPLVKMSITWRKDGAVVNTGIR----DFGRRLVISLPAVSDSGYYEC 296

Query: 105 EVSNGVGEAKSYSID--LSVLAAPYFTVEP-EFINAAEEETVTFECKASGLPEPEIHWVH 161
           E S       S +    L VL  P F  EP   I+A  E+ V   C+A G P+PEI W  
Sbjct: 297 EASLRSSSVPSVTAGAYLHVLEYPLFVKEPPSHISAEMEKVVDIPCQARGTPQPEIVWYK 356

Query: 162 NGKPISQAP-PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
           +  PIS    P  R  VG   + I  L   DTG + C A N  G +  + Y+ V + AP 
Sbjct: 357 DAVPISPVKIPRYRVLVG-GSLQINGLLPDDTGMFQCFARNLAGEIQTNTYLAVTSIAPN 415

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKIT 275
           IT  P D   +DG +V+L C   GAP+P + W   ++ L  G     R+T+LE+G L I+
Sbjct: 416 ITAGPSDSAVIDGMSVILHCETSGAPRPAITWQKGERVLASGSVQLPRFTLLESGSLLIS 475

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
               +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A   C    DP
Sbjct: 476 PSHLSDAGTYTCMASNSRGIDEASADLLVWARTRITKPPQDQSVIKGTKAVMTCGVTHDP 535

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
           S+ +  VW +    ID  + PR     D +L ++++   D G YTCR  +        A 
Sbjct: 536 SVTVRHVWEKSGTVIDVNTSPRLRLDPDGTLHISQTWSGDIGTYTCRVTSVGGNDSRSAH 595

Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAV-VSWNPVSPQSLRGH--FRGYKVQTWTEKDGEGSI 452
           L V+    AP N   +     K+A+ ++W     Q+  G+     Y ++  +E +   ++
Sbjct: 596 LRVRQLPHAPENPIAVLSTTEKRAINLTWA----QAFDGNSPLIRYILEV-SENNAPWTV 650

Query: 453 RELIVN-KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGT-VQS 509
             L+ N + EST   V   +PA     R+ A N    G  S E      PE  P    Q+
Sbjct: 651 --LLANIEPESTGVTVGGLIPARSYQFRLCAVNDVGRGQFSKETDRLTLPEEPPSAPPQT 708

Query: 510 LEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSA 567
           + A    + +  ++W  P +   NG L GY I+Y  + G    P+  ++  I++P  TS 
Sbjct: 709 VIASGRTNQSIMIQWQPPPESHQNGPLQGYIIRY-CLSGL---PVDCQMKNITNPDQTSL 764

Query: 568 KLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLVISW 622
            L  L   T Y I +A Y  AG G  S       L  VP   P NV+        +  +W
Sbjct: 765 LLEDLIIWTNYEIEVAAYNGAGRGTYSHKVTEWTLQGVPTVPPGNVQAEAVNSTTVRFTW 824

Query: 623 TA 624
           TA
Sbjct: 825 TA 826



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 171/683 (25%), Positives = 263/683 (38%), Gaps = 73/683 (10%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           + Q V++ +   +R  ++  F      P PQ  W +DG  I  S RI+      +L+I  
Sbjct: 132 RSQTVSQGEGALIRAPRIHSF------PRPQITWFRDGRKIPSSSRIAIA-LDNTLVILS 184

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFINAAEEETVT----- 144
               D G Y  + V++  GE K S  I L+V  +  P   + P  I   +  +VT     
Sbjct: 185 TVAPDAGRYYAQAVNDKNGENKTSQPITLTVENVGGPADPIAPSIIIPPKNTSVTVGRNE 244

Query: 145 --FECKASGLP--EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
              EC A+  P  +  I W  +G  ++       R  G  R+ I     SD+G Y C A 
Sbjct: 245 AIMECVANARPLVKMSITWRKDGAVVNTG----IRDFG-RRLVISLPAVSDSGYYECEAS 299

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK 257
             ++S+  V    Y++VL +   + E P        K V + C+  G P+PE+ W  +  
Sbjct: 300 LRSSSVPSVTAGAYLHVLEYPLFVKEPPSHISAEMEKVVDIPCQARGTPQPEIVWYKDAV 359

Query: 258 ELTG---GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHITDQ 313
            ++     RY +L  G L+I  +   D+G + CFARN  G  Q +  L V     +IT  
Sbjct: 360 PISPVKIPRYRVLVGGSLQINGLLPDDTGMFQCFARNLAGEIQTNTYLAVTSIAPNITAG 419

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKS 371
           P D  V  G S    C     P  + +I W +G   +   S   PRF      SL ++ S
Sbjct: 420 PSDSAVIDGMSVILHCETSGAP--RPAITWQKGERVLASGSVQLPRFTLLESGSLLISPS 477

Query: 372 SELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
              D+G YTC A       EA A L V              VI   KAV++         
Sbjct: 478 HLSDAGTYTCMASNSRGIDEASADLLVWARTRITKPPQDQSVIKGTKAVMTCGVT----- 532

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFA--------RVLAF 483
             H     V+   EK G      + VN       + D  +  S+ ++        RV + 
Sbjct: 533 --HDPSVTVRHVWEKSGT----VIDVNTSPRLRLDPDGTLHISQTWSGDIGTYTCRVTSV 586

Query: 484 NGAYNGPPSEIISFV--TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY 541
            G  +      +  +   PE     + + E       A  L W +    N  L+ Y ++ 
Sbjct: 587 GGNDSRSAHLRVRQLPHAPENPIAVLSTTE-----KRAINLTWAQAFDGNSPLIRYILEV 641

Query: 542 QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV- 600
            S        LL  +    +P +T   + GL P+  Y+  L      G G  SK    + 
Sbjct: 642 -SENNAPWTVLLANI----EPESTGVTVGGLIPARSYQFRLCAVNDVGRGQFSKETDRLT 696

Query: 601 -----PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDV 655
                P   P  V   G T  +++I W   PE   N P   Y I +            ++
Sbjct: 697 LPEEPPSAPPQTVIASGRTNQSIMIQWQPPPESHQNGPLQGYIIRYCLSGLPVDCQMKNI 756

Query: 656 LDWRQSELVLANQPTFQPYEIKV 678
            +  Q+ L+L +   +  YEI+V
Sbjct: 757 TNPDQTSLLLEDLIIWTNYEIEV 779



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 153/637 (24%), Positives = 247/637 (38%), Gaps = 64/637 (10%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEFSDQGSYTC 104
           K V++ C   GTP P+ +W KD VPI+P   +    Y    G SL I  +   D G + C
Sbjct: 336 KVVDIPCQARGTPQPEIVWYKDAVPISP---VKIPRYRVLVGGSLQINGLLPDDTGMFQC 392

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N  GE ++ +       AP  T  P      +  +V   C+ SG P P I W    +
Sbjct: 393 FARNLAGEIQTNTYLAVTSIAPNITAGPSDSAVIDGMSVILHCETSGAPRPAITWQKGER 452

Query: 165 PIS----QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
            ++    Q P     + G   I+  +L  SD G Y C A+NS G       + V A    
Sbjct: 453 VLASGSVQLPRFTLLESGSLLISPSHL--SDAGTYTCMASNSRGIDEASADLLVWART-R 509

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-----TGGRYTILETGDLKIT 275
           IT+ P+D+  + G   V+TC V   P   V  +  +        T  R  +   G L I+
Sbjct: 510 ITKPPQDQSVIKGTKAVMTCGVTHDPSVTVRHVWEKSGTVIDVNTSPRLRLDPDGTLHIS 569

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------EDYEVEAGQSATFR 328
                D G YTC   +  G    S  L V++  H  + P       E   +    +  F 
Sbjct: 570 QTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQLPHAPENPIAVLSTTEKRAINLTWAQAFD 629

Query: 329 CNAVSDPSLKLSIVWLRGSEP-----IDFESEPR------FVQSNDYSLTVTKSSELDSG 377
            N+   P ++  +     + P      + E E         + +  Y   +   +++  G
Sbjct: 630 GNS---PLIRYILEVSENNAPWTVLLANIEPESTGVTVGGLIPARSYQFRLCAVNDVGRG 686

Query: 378 QYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRG 437
           Q++ +    L   E         P  AP    +      +  ++ W P       G  +G
Sbjct: 687 QFS-KETDRLTLPEE--------PPSAPPQTVIASGRTNQSIMIQWQPPPESHQNGPLQG 737

Query: 438 YKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
           Y ++            + I N  + T+  ++  +  +     V A+NGA  G  S  ++ 
Sbjct: 738 YIIRYCLSGLPVDCQMKNITNP-DQTSLLLEDLIIWTNYEIEVAAYNGAGRGTYSHKVTE 796

Query: 498 VTPEGVP----GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKI-KYQSVKGTKVGPL 552
            T +GVP    G VQ+ EA+   +  F      P+  NG+  GYK+  ++  +  +V  +
Sbjct: 797 WTLQGVPTVPPGNVQA-EAVNSTTVRFTWTAPSPQFINGINQGYKLLAWEPSRPNEVAVV 855

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRG 612
           + R P   D +     +AGL+  T+Y   +  +T  GDG  S        ++     G  
Sbjct: 856 MVR-PNFQD-SVHIGYIAGLKRFTEYYTSVLCFTTPGDGPRSPPQRLRTHEDTPGAVGHL 913

Query: 613 STPN----NLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
           S  +    +L +SW   P+ E N     YRI W   N
Sbjct: 914 SFTDILDTSLKVSWKE-PQ-EKNGILTGYRISWEEFN 948



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 141/585 (24%), Positives = 223/585 (38%), Gaps = 64/585 (10%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEV 106
           V L C   G P P   W K G  +  S  +    +      SL+I     SD G+YTC  
Sbjct: 431 VILHCETSGAPRPAITWQK-GERVLASGSVQLPRFTLLESGSLLISPSHLSDAGTYTCMA 489

Query: 107 SN--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--WVHN 162
           SN  G+ EA   S DL V A    T  P+  +  +       C  +  P   +   W  +
Sbjct: 490 SNSRGIDEA---SADLLVWARTRITKPPQDQSVIKGTKAVMTCGVTHDPSVTVRHVWEKS 546

Query: 163 GKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAP 219
           G  I     +PR ++ P+  + I      D G Y C  T+  G   +  ++ V  L HAP
Sbjct: 547 GTVI-DVNTSPRLRLDPDGTLHISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQLPHAP 605

Query: 220 EITEAPKDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTIL------ETGDL 272
           E   A     T + + + LT  + F    P + +I    E     +T+L      E+  +
Sbjct: 606 ENPIAVLS--TTEKRAINLTWAQAFDGNSPLIRYILEVSE-NNAPWTVLLANIEPESTGV 662

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS--ATFRCN 330
            +  +  A S ++   A N +G  Q S     KE   +T  PE+      Q+  A+ R N
Sbjct: 663 TVGGLIPARSYQFRLCAVNDVGRGQFS-----KETDRLT-LPEEPPSAPPQTVIASGRTN 716

Query: 331 AV-------------SDPSLKLSIVWLRGSEPIDFE----SEPRFVQSNDYSLTVTKSSE 373
                          + P     I +     P+D +    + P         L +  + E
Sbjct: 717 QSIMIQWQPPPESHQNGPLQGYIIRYCLSGLPVDCQMKNITNPDQTSLLLEDLIIWTNYE 776

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRG 433
           ++   Y    +        + TL   VP   P N    + +++     +W   SPQ + G
Sbjct: 777 IEVAAYNGAGRGTYSHKVTEWTLQ-GVPTVPPGNVQ-AEAVNSTTVRFTWTAPSPQFING 834

Query: 434 HFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR----VLAFNGAYNG 489
             +GYK+  W E      +  ++V      +  +  ++   K F      VL F    +G
Sbjct: 835 INQGYKLLAW-EPSRPNEVAVVMVRPNFQDSVHIG-YIAGLKRFTEYYTSVLCFTTPGDG 892

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
           P S      T E  PG V  L    +  ++  + W +P++ NG+L GY+I ++    T  
Sbjct: 893 PRSPPQRLRTHEDTPGAVGHLSFTDILDTSLKVSWKEPQEKNGILTGYRISWEEFNRTNT 952

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
                R+ +     T   K+ GL P T Y I +A  T  G G  S
Sbjct: 953 -----RVTHYLPNLTQEYKVTGLTPLTTYTIQVAAMTSKGQGQLS 992



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 111/273 (40%), Gaps = 27/273 (9%)

Query: 126 PYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
           PYF +EP       E   +   C A G    E  W++NG  ++       R     R  I
Sbjct: 38  PYFKMEPPQTQVHLEGNRLVLTCMAEGSWPLEFKWIYNGTELT-------RFSLEYRYLI 90

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RVF 243
            +L +S  G+Y C   N +G + +      +A+     E  + +    G+  ++   R+ 
Sbjct: 91  PSLDRSHAGHYRCIVRNRVGAIMQCSTEVQVAYMGGFVEGERSQTVSQGEGALIRAPRIH 150

Query: 244 GAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSG- 300
             P+P++ W  + +++ +  R  I     L I      D+G Y   A N K G  + S  
Sbjct: 151 SFPRPQITWFRDGRKIPSSSRIAIALDNTLVILSTVAPDAGRYYAQAVNDKNGENKTSQP 210

Query: 301 -SLTVKEHTHITD--------QPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEPI 350
            +LTV+      D         P++  V  G++ A   C A + P +K+SI W +    +
Sbjct: 211 ITLTVENVGGPADPIAPSIIIPPKNTSVTVGRNEAIMECVANARPLVKMSITWRKDGAVV 270

Query: 351 DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +       ++     L ++  +  DSG Y C A
Sbjct: 271 NTG-----IRDFGRRLVISLPAVSDSGYYECEA 298



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 109/262 (41%), Gaps = 44/262 (16%)

Query: 414  IDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDK 469
            + A++ ++SW P    +SP       R Y VQ     D   ++    V+  E+ +  VD+
Sbjct: 1425 VQARRVLLSWEPGSDGLSP------VRYYTVQYRELPDSNWTVHSASVSH-ETNSYIVDR 1477

Query: 470  FVPASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKW 524
              P +    RV A N   +   SE    +T     P+  P     L   P  +++  ++W
Sbjct: 1478 LKPFTSYQFRVKATNDIGDSEYSEESEAITTLQDAPDKAPTI---LSVTPHTTTSVLVRW 1534

Query: 525  VKP--EQPNGVLMGYKIKYQSVKGTKVGPLLERL-------------PY----ISDPTTT 565
              P  +  NGVL+G++++Y+ +   +V     R              PY    +S+ + T
Sbjct: 1535 QPPPEDHINGVLLGFRVRYRELHYDRVRSFTVRTVNSPSTNWADLTAPYSVRNLSESSLT 1594

Query: 566  SAKLAGLEPSTKYRIHLAGYTKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVI 620
              +L  L    +Y I L+ Y   G+G  S  + +F    VP   P NV  + ST   L +
Sbjct: 1595 QYELDNLSKHKRYEIRLSVYNAVGEGPSSAPQEVFVGEAVPTAPPQNVVVQSSTATQLDV 1654

Query: 621  SWTAMPEIEHNAPHFKYRI-FW 641
            +W   P    N     Y+I FW
Sbjct: 1655 TWDPPPLDAQNGDIQGYKIYFW 1676



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 80/199 (40%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N +      +   +V W  V      G   GYKV  + EKD + +     V  
Sbjct: 1210 VPSSGPTNVSAFATT-SSSILVRWGEVQETDRNGLILGYKV-VYKEKDSDTAPDFWTVEG 1267

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-IISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G  S   I   T + VPG    +    + ++
Sbjct: 1268 NTSHSVQLTGLGKYVLYEIQVLAFTRIGDGRCSSPSILERTLDDVPGPPVGILFPEVRTT 1327

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P QPNG+++ Y+I ++          ++ L     P+      AGL+P   Y
Sbjct: 1328 SVRLIWQPPAQPNGIILAYQITFRRNSSNSNAATVDVL----SPSARQYTAAGLKPEMVY 1383

Query: 579  RIHLAGYTKAGDGAESKYL 597
               L   T+ G G  ++ L
Sbjct: 1384 VFRLTAQTRKGWGEAAEAL 1402



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 6/145 (4%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW--TEKDGEGSIRELIV 457
            VP   P N  ++Q   A +  V+W+P    +  G  +GYK+  W    ++    +R L +
Sbjct: 1634 VPTAPPQNV-VVQSSTATQLDVTWDPPPLDAQNGDIQGYKIYFWEFQLQNETERLRTLFL 1692

Query: 458  NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS 517
             +      ++      +     V AFN A +GP S      T +  P     +    L +
Sbjct: 1693 PE---LGVKLKNLTGYTTYMISVAAFNAAGDGPRSLPTRGRTQQAAPSAPSYVHFSELTT 1749

Query: 518  SAFYLKWVKPEQPNGVLMGYKIKYQ 542
            ++  + W +P+Q NG++ GY++ Y+
Sbjct: 1750 TSVNVSWGEPKQANGIIEGYRLVYE 1774



 Score = 44.3 bits (103), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 87/208 (41%), Gaps = 21/208 (10%)

Query: 456  IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE----IISFVTPEGV-PGTVQSL 510
            + N+ ++ + EV    P +    R+   N     PPS+    I +   P  + P  V   
Sbjct: 1059 LANEPDARSLEVLDLNPYTYYRFRMRQVNIVGTSPPSQPSRKIQTLQAPPDIAPANVTLR 1118

Query: 511  EAIPLGSSAFYLKWVK-PE---QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
             A     ++ +L+WV  PE     N  L+GY+I+Y    GTK G L      I D     
Sbjct: 1119 TA---SETSLWLRWVPLPEWEYNGNPDLVGYRIQYAKA-GTKGGVLSH---VIMDRLERE 1171

Query: 567  AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEGRGSTPNNLVIS 621
              +  LE  T+Y + +      G G  S+ +       VP   P NV    +T +++++ 
Sbjct: 1172 FTIEDLEEWTEYEVRVQAINGIGSGPWSQPVHCRTRESVPSSGPTNVSAFATTSSSILVR 1231

Query: 622  WTAMPEIEHNAPHFKYRIFWRRHNTGEA 649
            W  + E + N     Y++ ++  ++  A
Sbjct: 1232 WGEVQETDRNGLILGYKVVYKEKDSDTA 1259


>gi|260822511|ref|XP_002606645.1| hypothetical protein BRAFLDRAFT_120092 [Branchiostoma floridae]
 gi|229291989|gb|EEN62655.1| hypothetical protein BRAFLDRAFT_120092 [Branchiostoma floridae]
          Length = 2215

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 208/750 (27%), Positives = 313/750 (41%), Gaps = 80/750 (10%)

Query: 3    WQSRSEY-KIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVAL----RNKKVELFCIF 57
            +  R+EY K+G   + N +   +  +  R A    ++  K+++ L    R + + L CI 
Sbjct: 1158 YSCRAEYSKLGTIRIANTLTLIVDTASPRGARAPSFL--KRDINLPPVNRGEDLTLRCIT 1215

Query: 58   GGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYS 117
             G P P+  W +      PS R      G SLII+ V   D GSY C  SN +G+  +Y 
Sbjct: 1216 EGLPTPEVRWRRTSGGSLPSARARV--VGTSLIIEEVVERDAGSYECTASNSLGK-DTYE 1272

Query: 118  IDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
            + ++V AAPY+  EPE    A  +  T  C+A+G P PE+ W  NG+P+        R+V
Sbjct: 1273 VMVTVNAAPYWKTEPEGQMLAPGDDATILCEAAGTPTPEVSWKRNGEPLGD---QANRRV 1329

Query: 178  GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT-VDGKTV 236
                ++++ L K ++  Y C A N+LG    + Y+NV+   P +  A   +Y  V  +  
Sbjct: 1330 SGTTLSLQELVKDNSAVYQCIARNNLGTRITNAYINVVELPPIMLTAANKKYAYVQDQDA 1389

Query: 237  VLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTA 296
             L C  FG+PKPE+ W + ++ L G RY +L  G L IT V+  D G+Y C A NK G  
Sbjct: 1390 QLDCLSFGSPKPEITW-YKEELLAGDRYQVLSNGTLVITTVSTEDDGKYKCMAINKFGEE 1448

Query: 297  QGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
                 L+VK  T I   P   EV AG  A F C    DP L+L+I WL+   PI   S  
Sbjct: 1449 PLQAELSVKRKTTIATPPIALEVRAGNEAQFVCAVDKDPDLELTITWLKNGIPIMPGS-- 1506

Query: 357  RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDA 416
            R +Q    +L +  +   DS  YTC A+T  D   AQA L+V    E P N  L    D+
Sbjct: 1507 RIMQPVLGTLLIKDTINSDSAIYTCLARTTRDEASAQAALSVIDVPEPPMNLQLSNQADS 1566

Query: 417  KKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
                +SWN  S  +      GY +Q    +   G  +E+ V  G+   T      P    
Sbjct: 1567 -SVTLSWNVGSDNN--SPIEGYTIQYEENRMMPGEWQEMKVIDGKDILTADLDLNPWLTY 1623

Query: 477  FARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQ 529
              RV A N      PS+     T     P  VPG ++     P   +   + W  +   Q
Sbjct: 1624 QFRVTARNKVGESEPSDATEGYTTPAAAPSSVPGGIKGEGTEP---TNMVISWEPLPGLQ 1680

Query: 530  PNGVLMGYKIKYQS---VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYT 586
             NG  + Y+++Y+     +  +          ++DP      +      T Y I +    
Sbjct: 1681 QNGPGLKYEVRYRQQPEARKRRQADSDWTTETVNDPNGNEFIVEDTPTYTAYEITVQAKN 1740

Query: 587  KAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
              GDG  S  +        P    +N   R   P ++ + W  + E   N     Y++ +
Sbjct: 1741 DFGDGPLSDVVVGYSGEDFPAAAVENTAVRDVQPRSVRLDWDPVDEESVNGDLKGYKVRY 1800

Query: 642  RRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGES 701
                    W+ DD  +  +         TF+                          G+ 
Sbjct: 1801 --------WSDDDPDNVMEK--------TFE--------------------------GDE 1818

Query: 702  TTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
             T  +D   P       V+ +NG  +GPPS
Sbjct: 1819 PTALIDGLTPFKNYNFTVVPYNGKGDGPPS 1848



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 167/685 (24%), Positives = 273/685 (39%), Gaps = 77/685 (11%)

Query: 51   VELFCIFG-GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS- 107
            ++   I G   P P   W+KDG  PI+ ++RIS  +   SLI  +VE  D G Y+C    
Sbjct: 1106 LKCLSILGEAIPPPTIYWTKDGSNPIDLTERISI-DAENSLIFANVEEGDAGEYSCRAEY 1164

Query: 108  NGVGEAK-SYSIDLSV-LAAPYFTVEPEFIN-------AAEEETVTFECKASGLPEPEIH 158
            + +G  + + ++ L V  A+P     P F+            E +T  C   GLP PE+ 
Sbjct: 1165 SKLGTIRIANTLTLIVDTASPRGARAPSFLKRDINLPPVNRGEDLTLRCITEGLPTPEVR 1224

Query: 159  WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
            W         + P+ R +V    + IE + + D G+Y C A+NSLG    +V V V A A
Sbjct: 1225 WRRTS---GGSLPSARARVVGTSLIIEEVVERDAGSYECTASNSLGKDTYEVMVTVNA-A 1280

Query: 219  PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVA 278
            P     P+ +    G    + C   G P PEV+W  N + L       +    L + ++ 
Sbjct: 1281 PYWKTEPEGQMLAPGDDATILCEAAGTPTPEVSWKRNGEPLGDQANRRVSGTTLSLQELV 1340

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPS 336
              +S  Y C ARN LGT   +  + V E   I  T   + Y     Q A   C +   P 
Sbjct: 1341 KDNSAVYQCIARNNLGTRITNAYINVVELPPIMLTAANKKYAYVQDQDAQLDCLSFGSP- 1399

Query: 337  LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             K  I W +     +  +  R+   ++ +L +T  S  D G+Y C A  +      QA L
Sbjct: 1400 -KPEITWYKE----ELLAGDRYQVLSNGTLVITTVSTEDDGKYKCMAINKFGEEPLQAEL 1454

Query: 397  TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
            +V+                 +K  ++  P++ +   G+   +      + D E +I  L 
Sbjct: 1455 SVK-----------------RKTTIATPPIALEVRAGNEAQFVCAVDKDPDLELTITWLK 1497

Query: 457  ----------VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGT 506
                      + +    T  +   + +       LA            +S +    VP  
Sbjct: 1498 NGIPIMPGSRIMQPVLGTLLIKDTINSDSAIYTCLARTTRDEASAQAALSVI---DVPEP 1554

Query: 507  VQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP-LLERLPYISDPTTT 565
              +L+      S+  L W      N  + GY I+Y+     ++ P   + +  I      
Sbjct: 1555 PMNLQLSNQADSSVTLSWNVGSDNNSPIEGYTIQYEE---NRMMPGEWQEMKVIDGKDIL 1611

Query: 566  SAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL------FYVPFKNPDNVEGRGSTPNNLV 619
            +A L  L P   Y+  +    K G+   S            P   P  ++G G+ P N+V
Sbjct: 1612 TADL-DLNPWLTYQFRVTARNKVGESEPSDATEGYTTPAAAPSSVPGGIKGEGTEPTNMV 1670

Query: 620  ISWTAMPEIEHNAPHFKYRIFWR-------RHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
            ISW  +P ++ N P  KY + +R       R      W  + V D   +E ++ + PT+ 
Sbjct: 1671 ISWEPLPGLQQNGPGLKYEVRYRQQPEARKRRQADSDWTTETVNDPNGNEFIVEDTPTYT 1730

Query: 673  PYEIKVVQTWTEKD-GEGSIRELIV 696
             YEI V     + D G+G + +++V
Sbjct: 1731 AYEITV---QAKNDFGDGPLSDVVV 1752



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 120/259 (46%), Gaps = 15/259 (5%)

Query: 409  TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
            T ++ +  +   + W+PV  +S+ G  +GYKV+ W++ D +  + +    +G+  T  +D
Sbjct: 1767 TAVRDVQPRSVRLDWDPVDEESVNGDLKGYKVRYWSDDDPDNVMEKTF--EGDEPTALID 1824

Query: 469  KFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKP 527
               P       V+ +NG  +GPPS   +   TPE  PG   +L A  + S    ++W  P
Sbjct: 1825 GLTPFKNYNFTVVPYNGKGDGPPSSPPVKASTPESTPGAPGALRANVVDSKTLDVQWEAP 1884

Query: 528  EQPNGVLMGYKIKYQSVKGT-----KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
             +PNG + GY + Y+++ G      ++G  +E +    DP  TS +L  L+  T YRI L
Sbjct: 1885 LEPNGAITGYLLTYRTMPGPGVPEGRLGTPVEEV--FDDPAKTSVRLEELDEQTWYRIEL 1942

Query: 583  AGYTKAGDG----AESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
               TK G G     E+      P   P+ VE   +  + + +SW    ++      F   
Sbjct: 1943 RAKTKIGPGDVKELETSTSDPAPPLKPETVEILDTGEDFINVSWVPA-KVGPRPSQFYVE 2001

Query: 639  IFWRRHNTGEAWNQDDVLD 657
               R  N+ + W Q + +D
Sbjct: 2002 YRERGTNSEQMWLQTESVD 2020



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 139/342 (40%), Gaps = 31/342 (9%)

Query: 110  VGEAKSYSIDLSVLAAPYFT-VEPEFINAAEEETVTFECKA---SGLPEPEIHWVHNG-K 164
            +G     S+++ + A+P F   E   I          +C +     +P P I+W  +G  
Sbjct: 1070 IGLCLMMSLNILIPASPLFAFAEDREITVPVGAQHVLKCLSILGEAIPPPTIYWTKDGSN 1129

Query: 165  PISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNS-LGYVYKDVYVNVL------- 215
            PI       R  +   N +   N+ + D G Y C A  S LG +     + ++       
Sbjct: 1130 PIDL---TERISIDAENSLIFANVEEGDAGEYSCRAEYSKLGTIRIANTLTLIVDTASPR 1186

Query: 216  -AHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ-KELTGGRYTILETGDL 272
             A AP   +   +   V+ G+ + L C   G P PEV W       L   R  ++ T  L
Sbjct: 1187 GARAPSFLKRDINLPPVNRGEDLTLRCITEGLPTPEVRWRRTSGGSLPSARARVVGTS-L 1245

Query: 273  KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV 332
             I +V   D+G Y C A N LG       +TV    +   +PE   +  G  AT  C A 
Sbjct: 1246 IIEEVVERDAGSYECTASNSLGKDTYEVMVTVNAAPYWKTEPEGQMLAPGDDATILCEAA 1305

Query: 333  SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
              P+ ++S  W R  EP+  ++  R   +   +L++ +  + +S  Y C A+  L     
Sbjct: 1306 GTPTPEVS--WKRNGEPLGDQANRRVSGT---TLSLQELVKDNSAVYQCIARNNLGTRIT 1360

Query: 393  QATL-TVQVP----LEAPSNFTLIQVIDAKKAVVSWNPVSPQ 429
             A +  V++P      A   +  +Q  DA+   +S+    P+
Sbjct: 1361 NAYINVVELPPIMLTAANKKYAYVQDQDAQLDCLSFGSPKPE 1402



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 106/277 (38%), Gaps = 53/277 (19%)

Query: 141  ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNR--ITIE----NLRKSDTG 193
            E +  +C+A+G PE    W+ NG+ +   + P+      PN   ITIE    N  KS  G
Sbjct: 950  ELIVIDCEATGSPEIRYSWLKNGRELDVDSDPSISWSAAPNSGTITIELDGDNPDKSYEG 1009

Query: 194  NYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTC-RVFGAPKPEVN 251
             Y C A N  G    +    ++  +P    A   E TV  G   VL C  + G       
Sbjct: 1010 KYQCRAANHRGTAVTNEIEVIITASPLFAFAEDREITVPVGAQHVLKCLSILG------E 1063

Query: 252  WIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT 311
             IH    +  G   ++    L      FA       FA ++                   
Sbjct: 1064 AIHR---IIIGLCLMMSLNILIPASPLFA-------FAEDR------------------- 1094

Query: 312  DQPEDYEVEAGQSATFRCNAVSDPSL-KLSIVWLR-GSEPIDFESEPRFVQSNDYSLTVT 369
                +  V  G     +C ++   ++   +I W + GS PID     R     + SL   
Sbjct: 1095 ----EITVPVGAQHVLKCLSILGEAIPPPTIYWTKDGSNPIDLTE--RISIDAENSLIFA 1148

Query: 370  KSSELDSGQYTCRAQ-TELDFIEAQATLTVQVPLEAP 405
               E D+G+Y+CRA+ ++L  I    TLT+ V   +P
Sbjct: 1149 NVEEGDAGEYSCRAEYSKLGTIRIANTLTLIVDTASP 1185



 Score = 38.9 bits (89), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 101/252 (40%), Gaps = 45/252 (17%)

Query: 155  PEIHWVHNGKPISQAPPNPRRKVGPNRITI---ENLRKSDT------------GNYGCNA 199
            P I      +P S + P   R++ P+R+T+     L K+ T            G  G + 
Sbjct: 854  PGIVKFRKCQPKSSSQP---REIEPHRLTLIRPAKLPKTATNWHLVGIFVLVMGRVGRDK 910

Query: 200  TNSLGYVYKDVYVNVLA----HAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIH 254
             ++  Y + +V +  +A      P IT+    ++ VD +  +V+ C   G+P+   +W+ 
Sbjct: 911  QSATFYDFSNVLIFFIALTVPMPPVITKQAPTQHIVDPRELIVIDCEATGSPEIRYSWLK 970

Query: 255  NQKEL--------------TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSG 300
            N +EL                G  TI   GD    D ++   G+Y C A N  GTA  + 
Sbjct: 971  NGRELDVDSDPSISWSAAPNSGTITIELDGDNP--DKSY--EGKYQCRAANHRGTAVTNE 1026

Query: 301  SLTVKEHTHITDQPEDYE--VEAGQSATFRCNAVSDPSLKLSIV--WLRGSEPIDFESEP 356
               +   + +    ED E  V  G     +C ++   ++   I+   L  S  I   + P
Sbjct: 1027 IEVIITASPLFAFAEDREITVPVGAQHVLKCLSILGEAIHRIIIGLCLMMSLNILIPASP 1086

Query: 357  RFVQSNDYSLTV 368
             F  + D  +TV
Sbjct: 1087 LFAFAEDREITV 1098


>gi|338724586|ref|XP_001489278.3| PREDICTED: neurofascin [Equus caballus]
          Length = 1169

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/391 (35%), Positives = 201/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 263 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 321

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+ASG P+P I 
Sbjct: 322 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRASGNPKPTIQ 380

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 381 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 440

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 441 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 499

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 500 KMIHKEDQGIYTCVATNILGKAENQVRLEVKDPTRIFRMPEDQVAKRGTTVQLECRVKHD 559

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 560 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 616

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 617 YLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 646



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 153/671 (22%), Positives = 261/671 (38%), Gaps = 85/671 (12%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSTMDPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
             ++++ + +   P+        P+  +A    E T +F                    E
Sbjct: 220 KNAFTLKV-LTNHPHNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLE 278

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 279 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 335

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP + W+ N + L      
Sbjct: 336 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRASGNPKPTIQWMVNGEPLQSAPPN 394

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 395 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 452

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 453 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIHKEDQGIYT 511

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P      F + +   AK+       V  +    H    K+
Sbjct: 512 CVATNILGKAENQVRLEVKDPTRI---FRMPEDQVAKRGTT----VQLECRVKHDPSLKL 564

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII---- 495
             +W + D    I   +  + +S T            F       G+Y    S  +    
Sbjct: 565 TVSWLKDDEPLYIGNRMKKEDDSLTI-----------FGVAERDQGSYTCVASTELDQDL 613

Query: 496 --SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
             +++T  G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   
Sbjct: 614 AKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWH 672

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDN 607
           +   +   P + ++ +  L P   Y+  +    + G    S      +     P  NP +
Sbjct: 673 DHSKF---PGSVNSAVLQLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPAD 729

Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667
           V+G G+  NN+ I+WT M       P+ +Y + WRR  T E+WN  +V  W  S  V+  
Sbjct: 730 VKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRESWN--NVTVW-GSRYVVGQ 786

Query: 668 QPTFQPYEIKV 678
            P + PYEI+V
Sbjct: 787 TPVYVPYEIRV 797



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 98/225 (43%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP++   I+V+++    + WN V   +++
Sbjct: 793  YEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVK-IRVLNSTAISLQWNRVYSDTVQ 851

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     S+     R+     G+     V +  P S     ++  NG  
Sbjct: 852  GLLREYRAYYWRESSLLKSLWVSQKRQQASFPGDRLRGVVPRLFPYSNYKLEMVVVNGRG 911

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L GY ++Y    GT
Sbjct: 912  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILTGYTLRYVPFNGT 971

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            KVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 972  KVGKQIVENF----SPNQTKFTVQRADPVSRYRFTLSARTQVGSG 1012



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 120/314 (38%), Gaps = 49/314 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPPNPR----RKVGPNRITIENLRKSD--TGN 194
           + +  EC+A G P P  HW  N +  + A  +PR    R+ G   I   +  + +   G 
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIA-KDPRVSMKRRSGTLVIDFRSGGRPEEYEGE 109

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNW 252
           Y C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W
Sbjct: 110 YQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFW 169

Query: 253 IHNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK--- 305
           + +  +      R +    GDL  ++V   D   +Y+C AR     T Q   + T+K   
Sbjct: 170 MSSTMDPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNAFTLKVLT 229

Query: 306 EHTH----ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKL 339
            H H    + + P+ Y                       V  G      C A   P+   
Sbjct: 230 NHPHNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--P 287

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+
Sbjct: 288 DIAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVK 345

Query: 400 VP---LEAPSNFTL 410
                L+ P N  L
Sbjct: 346 AAPYWLDEPKNLIL 359



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 49/211 (23%), Positives = 84/211 (39%), Gaps = 25/211 (11%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQK--------ELTGGRYT 265
           L+  P IT+    ++ VD +  +++ C   G P P  +W  N +         ++  R +
Sbjct: 31  LSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMKRRS 90

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
                D +         GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD-SG 377
           V+ G   T +CN    P L   +++   S       + R  Q ++  L  +     D   
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSTMDPITQDKRVSQGHNGDLYFSNVMLQDMQT 203

Query: 378 QYTCRAQTELDF-IEAQATLTVQVPLEAPSN 407
            Y+C A+      I+ +   T++V    P N
Sbjct: 204 DYSCNARFHFTHTIQQKNAFTLKVLTNHPHN 234


>gi|332237964|ref|XP_003268174.1| PREDICTED: neuronal cell adhesion molecule isoform 1 [Nomascus
           leucogenys]
          Length = 1180

 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 174/550 (31%), Positives = 254/550 (46%), Gaps = 43/550 (7%)

Query: 24  ISASQNRHAPK-----QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPS 77
           ISA  +R  P      +   + K+E  LR   + L CI  G P P   W+K DG  + P 
Sbjct: 239 ISAKSSRERPPTFLTPEGNASNKEE--LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPK 294

Query: 78  DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINA 137
           +R    N+ K+L I HV  +D G+Y C   N +G A  ++I + V AAPY+   P+ +  
Sbjct: 295 NRTVYKNFEKTLQIVHVSEADSGNYQCIAKNALG-AIHHTISVRVKAAPYWITAPQNLVL 353

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  E  T  C+A+G P+P I W+ NG PI  AP +P RK+  + I   N+++  +  Y C
Sbjct: 354 SPGEDGTLICRANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQC 413

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQ 256
           NA+N  GY+  + +VNVLA  P I       Y V   +  +L C  FG+P P + W    
Sbjct: 414 NASNEYGYLLANAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGA 473

Query: 257 K--ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
           K   L    Y + E G L+I       +G YTC ARNKLG A+    L +K+ T I  QP
Sbjct: 474 KGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQP 533

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           E   V+ G   +F C    D +L L+++WL+ +   +  S+ RF    D+ L V   S+ 
Sbjct: 534 EYAVVQRGSMVSFECKVKHDHTLTLTVLWLKDNR--ELPSDERFTVDRDH-LVVADVSDE 590

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPS----------NFTLIQVIDAKKAVVSWN 424
           DSG YTC A T LD + A A L+V  P   P+          +  L   +D K   +SW 
Sbjct: 591 DSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWT 649

Query: 425 PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN 484
           P    +       + ++        G         G  TT ++ K  P      RV+A N
Sbjct: 650 PGDDNN--SPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQL-KLSPYVNYSFRVMAVN 706

Query: 485 GAYNGPPSE-----IISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPE---QPNGVLMG 536
           G     PSE     +     P+  P  V+ L + P       + W KP    + NG  + 
Sbjct: 707 GIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEP---DNLVITW-KPLNGFESNGPGLQ 762

Query: 537 YKIKYQSVKG 546
           YK+ ++   G
Sbjct: 763 YKVSWRQKDG 772



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 163/642 (25%), Positives = 263/642 (40%), Gaps = 70/642 (10%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTC--EVSNGVGEAKSYSIDLSVLAA------PYF 128
           S+R+SQG  G       +    +  Y C    ++     +   I + V++A      P  
Sbjct: 191 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISAKSSRERPPT 250

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---R 181
            + PE   + +EE     ++ EC A GLP P I+W    K     P N  R V  N    
Sbjct: 251 FLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKT 305

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR 241
           + I ++ ++D+GNY C A N+LG ++  + V V A AP    AP++     G+   L CR
Sbjct: 306 LQIVHVSEADSGNYQCIAKNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICR 364

Query: 242 VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQG 298
             G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    
Sbjct: 365 ANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLA 424

Query: 299 SGSLTVKEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           +  + V         P +  Y+V A + A   C     P    +I W +G++      E 
Sbjct: 425 NAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-ED 481

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP--LEAPSNFTLIQVI 414
            +V   + +L +  + +  +G YTC A+ +L   + +  L ++ P  +     + ++Q  
Sbjct: 482 IYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQ-- 539

Query: 415 DAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
             + ++VS+     +    H     +     KD     REL  +  E  T + D  V A 
Sbjct: 540 --RGSMVSF-----ECKVKHDHTLTLTVLWLKDN----RELPSD--ERFTVDRDHLVVAD 586

Query: 475 KNFARVLAFNGAYNG-----PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYL 522
            +      +    N        S ++S V P   P  V  +   P           +  L
Sbjct: 587 VSDEDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQL 646

Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
            W   +  N  +  + I+Y+        P L         T T+A+L  L P   Y   +
Sbjct: 647 SWTPGDDNNSPITKFIIEYEDAMHE---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRV 702

Query: 583 AGYTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
                 G      A  +YL     P KNP  VEG GS P+NLVI+W  +   E N P  +
Sbjct: 703 MAVNGIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQ 762

Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           Y++ WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 763 YKVSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 802



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 143/595 (24%), Positives = 239/595 (40%), Gaps = 69/595 (11%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
            + N+   L C F G+PLP   W K        + I   +   +L I   +    G+YTC 
Sbjct: 448  IANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCV 507

Query: 106  VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEIHWVHNG 163
              N +G AK+  + L +    +   +PE+        V+FECK          + W+ + 
Sbjct: 508  ARNKLGMAKN-EVHLEIKDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLTLTVLWLKDN 566

Query: 164  KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP---- 219
            +   + P + R  V  + + + ++   D+G Y C A  +L  V     ++V+A  P    
Sbjct: 567  R---ELPSDERFTVDRDHLVVADVSDEDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAP 623

Query: 220  --EITEAPKDEYTVD--GKTVVLT--------------CRVFGAPKPEVNWIHNQKELTG 261
              ++   P D    D   K+V L+                 +     E    H+Q E++G
Sbjct: 624  VYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSG 683

Query: 262  GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGS---------GSLTVKEHTHIT- 311
             +     T  LK++      +  +   A N +G +  S          S   K  T +  
Sbjct: 684  TQ----TTAQLKLSPYV---NYSFRVMAVNGIGKSLPSEASEQYLTKASEPDKNPTAVEG 736

Query: 312  --DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
               +P++  +       F  N    P L+  + W +     ++ S    V +N     V+
Sbjct: 737  LGSEPDNLVITWKPLNGFESNG---PGLQYKVSWRQKDGDDEWTS---VVVANVSKYIVS 790

Query: 370  KSSELDSGQYTCRAQTELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVSWNP 425
             +          +A  ++ F    A +T      +P+ AP N   + V+++  A V W+P
Sbjct: 791  GTPTFVPYLIKVQALNDMGFAPEPAVVTGHSGEDLPMVAPGNVR-VNVVNSTLAEVHWDP 849

Query: 426  VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK-----GESTTTEVDKFVPASKNFARV 480
            V  +S+RGH +GY++  W  +      R  I  K     G  T   +    P S     V
Sbjct: 850  VPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 909

Query: 481  LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
               NG   GP S    F TPEGVP    SL+ +     +  L+W  P  PNG+L  Y +K
Sbjct: 910  RVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVNPTLDSLTLEWDPPSHPNGILTEYTLK 969

Query: 541  YQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
            YQ +  T ++GPL++ ++P       T   L  L  ST+Y+ +    T AG G++
Sbjct: 970  YQPINSTHELGPLVDLKIPA----NKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQ 1020



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 137/605 (22%), Positives = 225/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 361 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 416

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 417 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 474

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 475 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIVKQ 532

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 533 PEYAVVQRGSMVSFECKVKHDHTLTLTVLWLKDNRELPSDERFTVDRDHLVVADVSDEDS 592

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 593 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 647

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A   
Sbjct: 648 WTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNG 707

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 708 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 766

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   +++  + E
Sbjct: 767 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDMGFAPEPAVVTGHSGE 823

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 824 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 883

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 884 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 936

Query: 616 NNLVI 620
           ++L I
Sbjct: 937 SSLKI 941



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 122/301 (40%), Gaps = 40/301 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 --EHTHITDQPEDYEVEAGQSAT---FRCNAVSDPSLKLS-----IVWLR--GSEPIDFE 353
                   ++P  +    G ++     R N +S   +        I W +  G  P +  
Sbjct: 238 VISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKN-- 295

Query: 354 SEPRFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFT 409
              R V  N + +L +   SE DSG Y C A+  L  I    ++ V+     + AP N  
Sbjct: 296 ---RTVYKNFEKTLQIVHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLV 352

Query: 410 L 410
           L
Sbjct: 353 L 353



 Score = 40.0 bits (92), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWI 253
           + C   ++L        +  L   P IT+    +Y +D +  +V+ C   G P P  +W 
Sbjct: 22  FLCQMISALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWT 81

Query: 254 HNQKELTGGRYTILE----TGDLKITDVAFADS----GEYTCFARNKLGTAQGSGSLTVK 305
            N       +  ++     TG L I  ++   +    G Y C ARN+ G A  +  +   
Sbjct: 82  RNGTHFDIDKDPLVTMKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRP 141

Query: 306 EHTHI--TDQPEDYEVEAGQSATFRC 329
             + +   ++ E   +++GQS    C
Sbjct: 142 SRSPLWTKEKLEPITLQSGQSLVLPC 167


>gi|332237966|ref|XP_003268175.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Nomascus
           leucogenys]
          Length = 1192

 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 174/550 (31%), Positives = 254/550 (46%), Gaps = 43/550 (7%)

Query: 24  ISASQNRHAPK-----QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPS 77
           ISA  +R  P      +   + K+E  LR   + L CI  G P P   W+K DG  + P 
Sbjct: 239 ISAKSSRERPPTFLTPEGNASNKEE--LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPK 294

Query: 78  DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINA 137
           +R    N+ K+L I HV  +D G+Y C   N +G A  ++I + V AAPY+   P+ +  
Sbjct: 295 NRTVYKNFEKTLQIVHVSEADSGNYQCIAKNALG-AIHHTISVRVKAAPYWITAPQNLVL 353

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  E  T  C+A+G P+P I W+ NG PI  AP +P RK+  + I   N+++  +  Y C
Sbjct: 354 SPGEDGTLICRANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQC 413

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQ 256
           NA+N  GY+  + +VNVLA  P I       Y V   +  +L C  FG+P P + W    
Sbjct: 414 NASNEYGYLLANAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGA 473

Query: 257 K--ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
           K   L    Y + E G L+I       +G YTC ARNKLG A+    L +K+ T I  QP
Sbjct: 474 KGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQP 533

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           E   V+ G   +F C    D +L L+++WL+ +   +  S+ RF    D+ L V   S+ 
Sbjct: 534 EYAVVQRGSMVSFECKVKHDHTLTLTVLWLKDNR--ELPSDERFTVDRDH-LVVADVSDE 590

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPS----------NFTLIQVIDAKKAVVSWN 424
           DSG YTC A T LD + A A L+V  P   P+          +  L   +D K   +SW 
Sbjct: 591 DSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWT 649

Query: 425 PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN 484
           P    +       + ++        G         G  TT ++ K  P      RV+A N
Sbjct: 650 PGDDNN--SPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQL-KLSPYVNYSFRVMAVN 706

Query: 485 GAYNGPPSE-----IISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPE---QPNGVLMG 536
           G     PSE     +     P+  P  V+ L + P       + W KP    + NG  + 
Sbjct: 707 GIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEP---DNLVITW-KPLNGFESNGPGLQ 762

Query: 537 YKIKYQSVKG 546
           YK+ ++   G
Sbjct: 763 YKVSWRQKDG 772



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 163/642 (25%), Positives = 263/642 (40%), Gaps = 70/642 (10%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTC--EVSNGVGEAKSYSIDLSVLAA------PYF 128
           S+R+SQG  G       +    +  Y C    ++     +   I + V++A      P  
Sbjct: 191 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISAKSSRERPPT 250

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---R 181
            + PE   + +EE     ++ EC A GLP P I+W    K     P N  R V  N    
Sbjct: 251 FLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKT 305

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR 241
           + I ++ ++D+GNY C A N+LG ++  + V V A AP    AP++     G+   L CR
Sbjct: 306 LQIVHVSEADSGNYQCIAKNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICR 364

Query: 242 VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQG 298
             G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    
Sbjct: 365 ANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLA 424

Query: 299 SGSLTVKEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           +  + V         P +  Y+V A + A   C     P    +I W +G++      E 
Sbjct: 425 NAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-ED 481

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP--LEAPSNFTLIQVI 414
            +V   + +L +  + +  +G YTC A+ +L   + +  L ++ P  +     + ++Q  
Sbjct: 482 IYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQ-- 539

Query: 415 DAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
             + ++VS+     +    H     +     KD     REL  +  E  T + D  V A 
Sbjct: 540 --RGSMVSF-----ECKVKHDHTLTLTVLWLKDN----RELPSD--ERFTVDRDHLVVAD 586

Query: 475 KNFARVLAFNGAYNG-----PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYL 522
            +      +    N        S ++S V P   P  V  +   P           +  L
Sbjct: 587 VSDEDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQL 646

Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
            W   +  N  +  + I+Y+        P L         T T+A+L  L P   Y   +
Sbjct: 647 SWTPGDDNNSPITKFIIEYEDAMHE---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRV 702

Query: 583 AGYTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
                 G      A  +YL     P KNP  VEG GS P+NLVI+W  +   E N P  +
Sbjct: 703 MAVNGIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQ 762

Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           Y++ WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 763 YKVSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 802



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 143/595 (24%), Positives = 239/595 (40%), Gaps = 69/595 (11%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
            + N+   L C F G+PLP   W K        + I   +   +L I   +    G+YTC 
Sbjct: 448  IANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCV 507

Query: 106  VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEIHWVHNG 163
              N +G AK+  + L +    +   +PE+        V+FECK          + W+ + 
Sbjct: 508  ARNKLGMAKN-EVHLEIKDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLTLTVLWLKDN 566

Query: 164  KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP---- 219
            +   + P + R  V  + + + ++   D+G Y C A  +L  V     ++V+A  P    
Sbjct: 567  R---ELPSDERFTVDRDHLVVADVSDEDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAP 623

Query: 220  --EITEAPKDEYTVD--GKTVVLT--------------CRVFGAPKPEVNWIHNQKELTG 261
              ++   P D    D   K+V L+                 +     E    H+Q E++G
Sbjct: 624  VYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSG 683

Query: 262  GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGS---------GSLTVKEHTHIT- 311
             +     T  LK++      +  +   A N +G +  S          S   K  T +  
Sbjct: 684  TQ----TTAQLKLSPYV---NYSFRVMAVNGIGKSLPSEASEQYLTKASEPDKNPTAVEG 736

Query: 312  --DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
               +P++  +       F  N    P L+  + W +     ++ S    V +N     V+
Sbjct: 737  LGSEPDNLVITWKPLNGFESNG---PGLQYKVSWRQKDGDDEWTS---VVVANVSKYIVS 790

Query: 370  KSSELDSGQYTCRAQTELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVSWNP 425
             +          +A  ++ F    A +T      +P+ AP N   + V+++  A V W+P
Sbjct: 791  GTPTFVPYLIKVQALNDMGFAPEPAVVTGHSGEDLPMVAPGNVR-VNVVNSTLAEVHWDP 849

Query: 426  VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK-----GESTTTEVDKFVPASKNFARV 480
            V  +S+RGH +GY++  W  +      R  I  K     G  T   +    P S     V
Sbjct: 850  VPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 909

Query: 481  LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
               NG   GP S    F TPEGVP    SL+ +     +  L+W  P  PNG+L  Y +K
Sbjct: 910  RVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVNPTLDSLTLEWDPPSHPNGILTEYTLK 969

Query: 541  YQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
            YQ +  T ++GPL++ ++P       T   L  L  ST+Y+ +    T AG G++
Sbjct: 970  YQPINSTHELGPLVDLKIPA----NKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQ 1020



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 137/605 (22%), Positives = 225/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 361 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 416

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 417 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 474

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 475 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIVKQ 532

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 533 PEYAVVQRGSMVSFECKVKHDHTLTLTVLWLKDNRELPSDERFTVDRDHLVVADVSDEDS 592

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 593 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 647

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A   
Sbjct: 648 WTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNG 707

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 708 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 766

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   +++  + E
Sbjct: 767 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDMGFAPEPAVVTGHSGE 823

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 824 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 883

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 884 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 936

Query: 616 NNLVI 620
           ++L I
Sbjct: 937 SSLKI 941



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 122/301 (40%), Gaps = 40/301 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 --EHTHITDQPEDYEVEAGQSAT---FRCNAVSDPSLKLS-----IVWLR--GSEPIDFE 353
                   ++P  +    G ++     R N +S   +        I W +  G  P +  
Sbjct: 238 VISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKN-- 295

Query: 354 SEPRFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFT 409
              R V  N + +L +   SE DSG Y C A+  L  I    ++ V+     + AP N  
Sbjct: 296 ---RTVYKNFEKTLQIVHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLV 352

Query: 410 L 410
           L
Sbjct: 353 L 353



 Score = 40.0 bits (92), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWI 253
           + C   ++L        +  L   P IT+    +Y +D +  +V+ C   G P P  +W 
Sbjct: 22  FLCQMISALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWT 81

Query: 254 HNQKELTGGRYTILE----TGDLKITDVAFADS----GEYTCFARNKLGTAQGSGSLTVK 305
            N       +  ++     TG L I  ++   +    G Y C ARN+ G A  +  +   
Sbjct: 82  RNGTHFDIDKDPLVTMKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRP 141

Query: 306 EHTHI--TDQPEDYEVEAGQSATFRC 329
             + +   ++ E   +++GQS    C
Sbjct: 142 SRSPLWTKEKLEPITLQSGQSLVLPC 167


>gi|326666180|ref|XP_003198206.1| PREDICTED: protein sidekick-2-like, partial [Danio rerio]
          Length = 2116

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 184/599 (30%), Positives = 275/599 (45%), Gaps = 40/599 (6%)

Query: 50  KVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           +V L C+    PL +    W K+GV +N   R    ++G+ L I     SD G Y CE S
Sbjct: 157 EVTLECVANARPLIKLSITWRKNGVLVNRGLR----DFGRRLTISGPLVSDSGYYQCEAS 212

Query: 108 NGVGEAKSYSID--LSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPEPEIHWVHNGK 164
                A S S    L VL  P F  EP+  I A  E+ V   C+A G+P+P+I W  +  
Sbjct: 213 LRSSSAPSVSAGAYLHVLEHPQFVKEPDRHITAEMEKVVDIPCQARGVPQPDIVWYKDAV 272

Query: 165 PISQAP-PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           PIS    P  R  VG   + I  L   DTG + C A N  G +  + Y+ V + AP IT 
Sbjct: 273 PISPVKTPRYRVLVG-GSLQINGLLPDDTGMFQCFARNLAGEIQTNTYLAVTSIAPNITA 331

Query: 224 APKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDVA 278
            P D   +DG +++L C   GAP+P + W   ++ L  G     R+T+LE+G L I+   
Sbjct: 332 GPSDSAVIDGMSIILHCETSGAPRPAITWQKAERVLASGSVQLPRFTLLESGSLLISPSH 391

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
             D+G YTC A N  G  + S  L V   T IT+ P+D  V  G  A   C    DPS+ 
Sbjct: 392 LLDAGSYTCMASNSRGIDEASADLVVWARTRITNPPQDQSVIKGTKAAMTCGVTHDPSVT 451

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           +  +W +G   ID +S PR    ++ +L ++++   D G YTCR  +        A L V
Sbjct: 452 VRHIWEKGGAVIDVKSSPRLRLDSNGTLHISQTWSGDIGTYTCRVTSVGGNDTRNAHLRV 511

Query: 399 QVPLEAPSNFTLIQVIDAKKAV-VSWNPVSPQSLRGH--FRGYKVQTWTEKDGEGSIREL 455
           +    AP N      I  ++ + ++W     Q+  G+     Y ++  +E +   ++  L
Sbjct: 512 RQLPHAPENLIATLSISERRTINLTWA----QAFDGNSPLIRYILEV-SENNAPWTV--L 564

Query: 456 IVN-KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT-PEGVPGT-VQSLEA 512
           + N + ES +  V   +PA     R+ A N    G  S   + V+ PE  P    Q++ A
Sbjct: 565 LANIEPESISVIVGGLIPARSYQFRLCAVNDVGKGQFSRETARVSLPEEPPSAPPQTVIA 624

Query: 513 IPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
               + +  ++W  P +   NG L GY I+Y  + G    P+  ++  I++P  T+  L 
Sbjct: 625 SGRTNQSIMIQWQPPPESHQNGPLQGYIIRY-CLSGL---PVDCQMKNITNPDQTNLLLE 680

Query: 571 GLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLVISWTA 624
            L   T Y I +A Y  AG G  S       L  VP   P NV+        +  +W+A
Sbjct: 681 DLIIWTNYEIEVAAYNGAGQGVYSPKVTEWTLQGVPTVPPGNVQAEAVNSTTVRFTWSA 739



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 171/390 (43%), Gaps = 38/390 (9%)

Query: 32  APKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLII 91
           A + Q V++ +   ++  K+  F      P P   W +DG  I PS RI+      +L+I
Sbjct: 43  AERSQVVSQGEAALIQPPKIHSF------PRPGITWFRDGRKIPPSSRIAI-TLDNTLVI 95

Query: 92  KHVEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFINAAEEET----- 142
                 D G Y  + V++  GE K S  + L+V  +  P   + P  I   +  +     
Sbjct: 96  LSTVAPDAGRYYAQAVNDKNGENKTSQPVILTVENVGGPADPIAPSIIIPPKNTSVMVGT 155

Query: 143 --VTFECKASGLP--EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCN 198
             VT EC A+  P  +  I W  NG  +++      R  G  R+TI     SD+G Y C 
Sbjct: 156 FEVTLECVANARPLIKLSITWRKNGVLVNRG----LRDFG-RRLTISGPLVSDSGYYQCE 210

Query: 199 A---TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIH 254
           A   ++S   V    Y++VL H P+  + P    T + + VV + C+  G P+P++ W  
Sbjct: 211 ASLRSSSAPSVSAGAYLHVLEH-PQFVKEPDRHITAEMEKVVDIPCQARGVPQPDIVWYK 269

Query: 255 NQKELT---GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHI 310
           +   ++     RY +L  G L+I  +   D+G + CFARN  G  Q +  L V     +I
Sbjct: 270 DAVPISPVKTPRYRVLVGGSLQINGLLPDDTGMFQCFARNLAGEIQTNTYLAVTSIAPNI 329

Query: 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTV 368
           T  P D  V  G S    C     P  + +I W +    +   S   PRF      SL +
Sbjct: 330 TAGPSDSAVIDGMSIILHCETSGAP--RPAITWQKAERVLASGSVQLPRFTLLESGSLLI 387

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           + S  LD+G YTC A       EA A L V
Sbjct: 388 SPSHLLDAGSYTCMASNSRGIDEASADLVV 417



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 139/581 (23%), Positives = 218/581 (37%), Gaps = 60/581 (10%)

Query: 53  LFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNY--GKSLIIKHVEFSDQGSYTCEVSN- 108
           L C   G P P   W K + V  + S ++ +       SL+I      D GSYTC  SN 
Sbjct: 346 LHCETSGAPRPAITWQKAERVLASGSVQLPRFTLLESGSLLISPSHLLDAGSYTCMASNS 405

Query: 109 -GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI-HWVHNGKPI 166
            G+ EA   S DL V A    T  P+  +  +       C  +  P   + H    G  +
Sbjct: 406 RGIDEA---SADLVVWARTRITNPPQDQSVIKGTKAAMTCGVTHDPSVTVRHIWEKGGAV 462

Query: 167 SQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAPEITE 223
                +PR ++  N  + I      D G Y C  T+  G   ++ ++ V  L HAPE   
Sbjct: 463 IDVKSSPRLRLDSNGTLHISQTWSGDIGTYTCRVTSVGGNDTRNAHLRVRQLPHAPENLI 522

Query: 224 APKDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTIL------ETGDLKITD 276
           A       + +T+ LT  + F    P + +I    E     +T+L      E+  + +  
Sbjct: 523 ATLS--ISERRTINLTWAQAFDGNSPLIRYILEVSE-NNAPWTVLLANIEPESISVIVGG 579

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS--ATFRCNAV-- 332
           +  A S ++   A N +G  Q S        T     PE+      Q+  A+ R N    
Sbjct: 580 LIPARSYQFRLCAVNDVGKGQFS------RETARVSLPEEPPSAPPQTVIASGRTNQSIM 633

Query: 333 -----------SDPSLKLSIVWLRGSEPIDFE----SEPRFVQSNDYSLTVTKSSELDSG 377
                      + P     I +     P+D +    + P         L +  + E++  
Sbjct: 634 IQWQPPPESHQNGPLQGYIIRYCLSGLPVDCQMKNITNPDQTNLLLEDLIIWTNYEIEVA 693

Query: 378 QYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRG 437
            Y    Q        + TL   VP   P N    + +++     +W+  SPQ + G  +G
Sbjct: 694 AYNGAGQGVYSPKVTEWTLQ-GVPTVPPGNVQ-AEAVNSTTVRFTWSAPSPQFINGINQG 751

Query: 438 YKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR----VLAFNGAYNGPPSE 493
           YK+  W E   E  +  + V      +  V  ++   K F      VL F    +GP S 
Sbjct: 752 YKLLAW-EPGHEEDVTLVTVRPNFQDSVHVG-YISGLKKFTEYFTCVLCFTTPGDGPRST 809

Query: 494 IISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
                T E  PG V  L    +  ++  + W  P + NG+L GY+I ++    T      
Sbjct: 810 AQRIRTHEDTPGPVGHLSFTEILDTSLKVSWKDPPEKNGILTGYRISWEEFNRTNT---- 865

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            R+ +     T   ++ GL   T Y I +AG T  G G  S
Sbjct: 866 -RVTHYLPNMTQEYRVTGLTALTTYTIQVAGMTNKGQGQLS 905



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 127/301 (42%), Gaps = 48/301 (15%)

Query: 379  YTCRAQTELDFIEAQATLTVQVPLEA---PSNFTLI--QVIDAKKAVVSWNP----VSPQ 429
            +   AQT   + EA   L V     A   P++  ++  + + A+  ++SW P    +SP 
Sbjct: 1298 FRLTAQTRKGWGEAAEALVVTTEKRARPQPTSRPVVPQEEVQARSVLLSWEPGSDGLSP- 1356

Query: 430  SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
                  R Y +Q     D   ++    VN  E+T+  +D+  P +    RV A N   + 
Sbjct: 1357 -----IRYYTIQYRELPDSNWTVHSASVNH-EATSYVIDRLKPFTSYQFRVKATNDIGDS 1410

Query: 490  PPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQ 542
              SE    +T     P+  P     L   P  +++  ++W  P  E+ NG+L+G++++Y+
Sbjct: 1411 EYSEESEAITTLQDAPDKAPTI---LSVTPHTTTSVLVRWKPPPEEEINGILLGFRVRYR 1467

Query: 543  SVKGTKVGPLLERL-------------PY----ISDPTTTSAKLAGLEPSTKYRIHLAGY 585
             ++  ++     R              PY    +S+ + T  +L  L    +Y I L+ Y
Sbjct: 1468 ELRYDRLRSFTVRTVNSPAGNWAELTAPYSVRNLSESSLTQYELDNLNKHKRYEIRLSVY 1527

Query: 586  TKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
               G+G  S  + +F    VP   P NV  + ST   L ++W   P    N     Y+I+
Sbjct: 1528 NAVGEGPTSSPQEVFVGEAVPTAAPQNVAIQSSTATQLDVTWDPPPVEAQNGDIQGYKIY 1587

Query: 641  W 641
            +
Sbjct: 1588 Y 1588



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 6/145 (4%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW--TEKDGEGSIRELIV 457
            VP  AP N   IQ   A +  V+W+P   ++  G  +GYK+  W    ++    +R L +
Sbjct: 1547 VPTAAPQNVA-IQSSTATQLDVTWDPPPVEAQNGDIQGYKIYYWEFQLQNETERLRTLFL 1605

Query: 458  NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS 517
             +    + ++      +     V AFN A +GP S      T +  P     +    L +
Sbjct: 1606 PE---LSVKLKNLTGYTTYMISVSAFNAAGDGPRSLPTRGRTQQAAPSAPNFIHFSELTT 1662

Query: 518  SAFYLKWVKPEQPNGVLMGYKIKYQ 542
            ++  + W +P+QPNG++ GY++ Y+
Sbjct: 1663 TSVNMSWGEPKQPNGIVEGYRVVYE 1687



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N +      +   +V W  V      G   GYKV  + EKD E  +    V  
Sbjct: 1123 VPSSGPANVSAFATTSSS-ILVRWGDVPETDRNGLILGYKV-VYKEKDAESVLHFWTVEG 1180

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF-VTPEGVPGTVQSLEAIPLGSS 518
              + + ++           +VL+F    +G PS    F  T + VPG    +    + +S
Sbjct: 1181 NTTYSVQLTGLGKYVLYEIQVLSFTRIGDGMPSSPPIFERTLDDVPGPPVGILFPEVRTS 1240

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P QPNG+++ Y+I ++    +     ++ L    +P+       GL+P + Y
Sbjct: 1241 SVRLIWQPPAQPNGIILAYQIAFRRNSSSITSANVDVL----NPSARQYTATGLKPESVY 1296

Query: 579  RIHLAGYTKAGDGAESKYL 597
               L   T+ G G  ++ L
Sbjct: 1297 VFRLTAQTRKGWGEAAEAL 1315



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 129/307 (42%), Gaps = 48/307 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  +     T + Q +L    + +T++  VP E P   T I + +          
Sbjct: 883  LTALTTYTIQVAGMTNKGQGQL----SSSTISSGVPPEMPGPPTNIAISN---------- 928

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE--------LIVNKGESTTTEVDKFVP 472
            +SP+S+   F+ GY  +T    W  +   G I E         + N+ ++ + EV    P
Sbjct: 929  ISPRSVTLQFKPGYDGKTSISRWLIEAQIGVIGENEEWVMVHQLSNEPDARSLEVQGLNP 988

Query: 473  ASKNFARVLAFNGAYNGPPSE----IISFVTPEGV-PGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    I +   P  + P  +    A     ++ +L+WV  
Sbjct: 989  YTYYRFRMRQVNIVGTSPPSQPSRKIQTLQAPPDIAPANITLRTA---SETSLWLRWVPL 1045

Query: 527  PE---QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N  L+GY+++Y  + G+KVG L   +P   D       +  LE  T+Y + + 
Sbjct: 1046 PEWEYNGNPELVGYRVQYSRL-GSKVGFLSHIIP---DRQEREFTIEDLEEWTEYEVKVQ 1101

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S+ +       VP   P NV    +T +++++ W  +PE + N     Y+
Sbjct: 1102 AFNGIGPGPWSQPVHGRTRESVPSSGPANVSAFATTSSSILVRWGDVPETDRNGLILGYK 1161

Query: 639  IFWRRHN 645
            + ++  +
Sbjct: 1162 VVYKEKD 1168



 Score = 39.3 bits (90), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 49/124 (39%), Gaps = 6/124 (4%)

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV------PFKNPDNVEGRGST 614
           +P + S  + GL P+  Y+  L      G G  S+    V      P   P  V   G T
Sbjct: 569 EPESISVIVGGLIPARSYQFRLCAVNDVGKGQFSRETARVSLPEEPPSAPPQTVIASGRT 628

Query: 615 PNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPY 674
             +++I W   PE   N P   Y I +            ++ +  Q+ L+L +   +  Y
Sbjct: 629 NQSIMIQWQPPPESHQNGPLQGYIIRYCLSGLPVDCQMKNITNPDQTNLLLEDLIIWTNY 688

Query: 675 EIKV 678
           EI+V
Sbjct: 689 EIEV 692


>gi|403257026|ref|XP_003921139.1| PREDICTED: neuronal cell adhesion molecule isoform 5 [Saimiri
           boliviensis boliviensis]
          Length = 1304

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 141/394 (35%), Positives = 202/394 (51%), Gaps = 21/394 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  I P++R S  N+ K+L I HV  +D G+Y C
Sbjct: 283 LRGNVLLLECIAEGLPTPLIYWAKEDG--ILPTNRTSYKNFKKTLQITHVSEADSGNYQC 340

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+ + P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 341 IAKNALG-AIHHTISVRVKAAPYWIMAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 399

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + ++NVLA  P I   
Sbjct: 400 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFINVLAEPPRILTP 459

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 460 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 519

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 520 TGTYTCVARNKLGMAKNDVHLEIKDPTWIIKQPEYAVVQRGGMVSFECKVKHDHTLVLTV 579

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +E  +  ++ RF    D+ L V   S+ DSG YTC A T LD + A A L+V  P
Sbjct: 580 LWLKDNE--ELPNDERFTVDKDH-LVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAP 636

Query: 402 LEAPS----------NFTLIQVIDAKKAVVSWNP 425
              P           +  L   +D K   +SW P
Sbjct: 637 TPTPVPVYDVPNPPFDLELTDQLD-KSVQLSWTP 669



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 147/580 (25%), Positives = 237/580 (40%), Gaps = 60/580 (10%)

Query: 130 VEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGKPISQAPPN-PRRKVGPNRITI 184
           + PE   +++EE     +  EC A GLP P I+W    K     P N    K     + I
Sbjct: 271 LTPEGNASSKEELRGNVLLLECIAEGLPTPLIYW---AKEDGILPTNRTSYKNFKKTLQI 327

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFG 244
            ++ ++D+GNY C A N+LG ++  + V V A AP    AP++     G+   L CR  G
Sbjct: 328 THVSEADSGNYQCIAKNALGAIHHTISVRVKA-APYWIMAPQNLVLSPGEDGTLICRANG 386

Query: 245 APKPEVNWIHNQK--ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGS 301
            PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    +  
Sbjct: 387 NPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAF 446

Query: 302 LTVKEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFV 359
           + V         P +  Y+V A + A   C     P    +I W +G++      E  +V
Sbjct: 447 INVLAEPPRILTPANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYV 503

Query: 360 QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA 416
              + +L +  + +  +G YTC A+ +L   +    L ++ P   ++ P  + ++Q    
Sbjct: 504 LHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDPTWIIKQPE-YAVVQ---- 558

Query: 417 KKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
           +  +VS+     +    H     +     KD E       +   E  T + D  V A  +
Sbjct: 559 RGGMVSF-----ECKVKHDHTLVLTVLWLKDNEE------LPNDERFTVDKDHLVVADVS 607

Query: 477 FARVLAFNGAYNG-----PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKW 524
                 +    N        S ++S V P   P  V  +   P           +  L W
Sbjct: 608 DDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPVPVYDVPNPPFDLELTDQLDKSVQLSW 667

Query: 525 VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAG 584
              +  N  +  + I+Y+        P L         T T+A+L  L P   Y   +  
Sbjct: 668 TPGDDNNSPITKFIIEYEDAMHE---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVTA 723

Query: 585 YTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
               G      A  +Y+     P KNP  VEG GS P+NLVI+W  +   E N P  +Y+
Sbjct: 724 MNSIGKSLPSEASEQYMTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYK 783

Query: 639 IFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           + WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 784 VSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 821



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 98/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  ++     R  I  K
Sbjct: 844  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQNSPKRNRRHIEKK 902

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 903  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 962

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 963  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTQWTLKNL 1018

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1019 NFSTRYKFYFYAQTSAGSGSQ 1039



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 138/605 (22%), Positives = 225/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 380 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 436 NEYGYLLANAF-INVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 493

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    DV++ +      I + 
Sbjct: 494 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPTWIIKQ 551

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 552 PEYAVVQRGGMVSFECKVKHDHTLVLTVLWLKDNEELPNDERFTVDKDHLVVADVSDDDS 611

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 612 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPVPVYDVPNPPFDLELTDQLDKSVQLS 666

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 667 WTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVTAMNS 726

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 727 IGKSLPSEASEQYMTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 785

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 786 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAVVMGHSGE 842

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 843 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQNSPKRNRRHIEKK 902

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 903 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 955

Query: 616 NNLVI 620
           ++L I
Sbjct: 956 SSLKI 960



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 125/315 (39%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+ +G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQNGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 E------HTHITDQPEDYEVEAGQSATFR--------CNAVSDPSLKLSIVWLRG----- 346
                  +  I     D E    +S   R         NA S   L+ +++ L       
Sbjct: 238 VISVDELNDTIAANLSDTEFYGAKSNRERPPTFLTPEGNASSKEELRGNVLLLECIAEGL 297

Query: 347 -SEPIDFESEPRFVQSNDYS-------LTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
            +  I +  E   + +N  S       L +T  SE DSG Y C A+  L  I    ++ V
Sbjct: 298 PTPLIYWAKEDGILPTNRTSYKNFKKTLQITHVSEADSGNYQCIAKNALGAIHHTISVRV 357

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 358 KAAPYWIMAPQNLVL 372


>gi|403257024|ref|XP_003921138.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Saimiri
           boliviensis boliviensis]
          Length = 1211

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 141/394 (35%), Positives = 202/394 (51%), Gaps = 21/394 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  I P++R S  N+ K+L I HV  +D G+Y C
Sbjct: 283 LRGNVLLLECIAEGLPTPLIYWAKEDG--ILPTNRTSYKNFKKTLQITHVSEADSGNYQC 340

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+ + P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 341 IAKNALG-AIHHTISVRVKAAPYWIMAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 399

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + ++NVLA  P I   
Sbjct: 400 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFINVLAEPPRILTP 459

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 460 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 519

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 520 TGTYTCVARNKLGMAKNDVHLEIKDPTWIIKQPEYAVVQRGGMVSFECKVKHDHTLVLTV 579

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +E  +  ++ RF    D+ L V   S+ DSG YTC A T LD + A A L+V  P
Sbjct: 580 LWLKDNE--ELPNDERFTVDKDH-LVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAP 636

Query: 402 LEAPS----------NFTLIQVIDAKKAVVSWNP 425
              P           +  L   +D K   +SW P
Sbjct: 637 TPTPVPVYDVPNPPFDLELTDQLD-KSVQLSWTP 669



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 147/580 (25%), Positives = 237/580 (40%), Gaps = 60/580 (10%)

Query: 130 VEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGKPISQAPPN-PRRKVGPNRITI 184
           + PE   +++EE     +  EC A GLP P I+W    K     P N    K     + I
Sbjct: 271 LTPEGNASSKEELRGNVLLLECIAEGLPTPLIYW---AKEDGILPTNRTSYKNFKKTLQI 327

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFG 244
            ++ ++D+GNY C A N+LG ++  + V V A AP    AP++     G+   L CR  G
Sbjct: 328 THVSEADSGNYQCIAKNALGAIHHTISVRVKA-APYWIMAPQNLVLSPGEDGTLICRANG 386

Query: 245 APKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGS 301
            PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    +  
Sbjct: 387 NPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAF 446

Query: 302 LTVKEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFV 359
           + V         P +  Y+V A + A   C     P    +I W +G++      E  +V
Sbjct: 447 INVLAEPPRILTPANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYV 503

Query: 360 QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA 416
              + +L +  + +  +G YTC A+ +L   +    L ++ P   ++ P  + ++Q    
Sbjct: 504 LHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDPTWIIKQPE-YAVVQ---- 558

Query: 417 KKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
           +  +VS+     +    H     +     KD E       +   E  T + D  V A  +
Sbjct: 559 RGGMVSF-----ECKVKHDHTLVLTVLWLKDNEE------LPNDERFTVDKDHLVVADVS 607

Query: 477 FARVLAFNGAYNG-----PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKW 524
                 +    N        S ++S V P   P  V  +   P           +  L W
Sbjct: 608 DDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPVPVYDVPNPPFDLELTDQLDKSVQLSW 667

Query: 525 VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAG 584
              +  N  +  + I+Y+        P L         T T+A+L  L P   Y   +  
Sbjct: 668 TPGDDNNSPITKFIIEYEDAMHE---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVTA 723

Query: 585 YTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
               G      A  +Y+     P KNP  VEG GS P+NLVI+W  +   E N P  +Y+
Sbjct: 724 MNSIGKSLPSEASEQYMTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYK 783

Query: 639 IFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           + WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 784 VSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 821



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 98/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  ++     R  I  K
Sbjct: 844  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQNSPKRNRRHIEKK 902

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 903  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 962

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 963  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTQWTLKNL 1018

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1019 NFSTRYKFYFYAQTSAGSGSQ 1039



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 138/605 (22%), Positives = 225/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 380 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 436 NEYGYLLANAF-INVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 493

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    DV++ +      I + 
Sbjct: 494 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPTWIIKQ 551

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 552 PEYAVVQRGGMVSFECKVKHDHTLVLTVLWLKDNEELPNDERFTVDKDHLVVADVSDDDS 611

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 612 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPVPVYDVPNPPFDLELTDQLDKSVQLS 666

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 667 WTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVTAMNS 726

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 727 IGKSLPSEASEQYMTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 785

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 786 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAVVMGHSGE 842

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 843 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQNSPKRNRRHIEKK 902

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 903 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 955

Query: 616 NNLVI 620
           ++L I
Sbjct: 956 SSLKI 960



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 125/315 (39%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+ +G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQNGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 E------HTHITDQPEDYEVEAGQSATFR--------CNAVSDPSLKLSIVWLRG----- 346
                  +  I     D E    +S   R         NA S   L+ +++ L       
Sbjct: 238 VISVDELNDTIAANLSDTEFYGAKSNRERPPTFLTPEGNASSKEELRGNVLLLECIAEGL 297

Query: 347 -SEPIDFESEPRFVQSNDYS-------LTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
            +  I +  E   + +N  S       L +T  SE DSG Y C A+  L  I    ++ V
Sbjct: 298 PTPLIYWAKEDGILPTNRTSYKNFKKTLQITHVSEADSGNYQCIAKNALGAIHHTISVRV 357

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 358 KAAPYWIMAPQNLVL 372


>gi|332237972|ref|XP_003268178.1| PREDICTED: neuronal cell adhesion molecule isoform 5 [Nomascus
           leucogenys]
          Length = 1304

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 167/523 (31%), Positives = 243/523 (46%), Gaps = 36/523 (6%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  + P +R    N+ K+L I HV  +D G+Y C
Sbjct: 283 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIVHVSEADSGNYQC 340

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+   P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 341 IAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 399

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 400 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 459

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 460 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 519

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 520 TGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLTLTV 579

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  S+ RF    D+ L V   S+ DSG YTC A T LD + A A L+V  P
Sbjct: 580 LWLKDNR--ELPSDERFTVDRDH-LVVADVSDEDSGTYTCVANTTLDSVSASAVLSVVAP 636

Query: 402 LEAPS----------NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGS 451
              P+          +  L   +D K   +SW P    +       + ++        G 
Sbjct: 637 TPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWTPGDDNN--SPITKFIIEYEDAMHEPGL 693

Query: 452 IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPGT 506
                   G  TT ++ K  P      RV+A NG     PSE     +     P+  P  
Sbjct: 694 WHHQTEVSGTQTTAQL-KLSPYVNYSFRVMAVNGIGKSLPSEASEQYLTKASEPDKNPTA 752

Query: 507 VQSLEAIPLGSSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
           V+ L + P       + W KP    + NG  + YK+ ++   G
Sbjct: 753 VEGLGSEP---DNLVITW-KPLNGFESNGPGLQYKVSWRQKDG 791



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 147/564 (26%), Positives = 234/564 (41%), Gaps = 58/564 (10%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W    K     P N  R V  N    + I ++ ++D+GNY C A
Sbjct: 288 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIVHVSEADSGNYQCIA 342

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK-- 257
            N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 343 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 401

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N+ G    +  + V         P +
Sbjct: 402 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPAN 461

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + + 
Sbjct: 462 TLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKD 518

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVP--LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            +G YTC A+ +L   + +  L ++ P  +     + ++Q    + ++VS+     +   
Sbjct: 519 STGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQ----RGSMVSF-----ECKV 569

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG--- 489
            H     +     KD     REL  +  E  T + D  V A  +      +    N    
Sbjct: 570 KHDHTLTLTVLWLKDN----RELPSD--ERFTVDRDHLVVADVSDEDSGTYTCVANTTLD 623

Query: 490 --PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIK 540
               S ++S V P   P  V  +   P           +  L W   +  N  +  + I+
Sbjct: 624 SVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIE 683

Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKY 596
           Y+        P L         T T+A+L  L P   Y   +      G      A  +Y
Sbjct: 684 YEDAMHE---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNGIGKSLPSEASEQY 739

Query: 597 LFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
           L     P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W    
Sbjct: 740 LTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS-- 797

Query: 655 VLDWRQSELVLANQPTFQPYEIKV 678
           V+    S+ +++  PTF PY IKV
Sbjct: 798 VVVANVSKYIVSGTPTFVPYLIKV 821



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 143/595 (24%), Positives = 239/595 (40%), Gaps = 69/595 (11%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
            + N+   L C F G+PLP   W K        + I   +   +L I   +    G+YTC 
Sbjct: 467  IANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCV 526

Query: 106  VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEIHWVHNG 163
              N +G AK+  + L +    +   +PE+        V+FECK          + W+ + 
Sbjct: 527  ARNKLGMAKN-EVHLEIKDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLTLTVLWLKDN 585

Query: 164  KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP---- 219
            +   + P + R  V  + + + ++   D+G Y C A  +L  V     ++V+A  P    
Sbjct: 586  R---ELPSDERFTVDRDHLVVADVSDEDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAP 642

Query: 220  --EITEAPKDEYTVD--GKTVVLT--------------CRVFGAPKPEVNWIHNQKELTG 261
              ++   P D    D   K+V L+                 +     E    H+Q E++G
Sbjct: 643  VYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSG 702

Query: 262  GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGS---------GSLTVKEHTHIT- 311
             +     T  LK++      +  +   A N +G +  S          S   K  T +  
Sbjct: 703  TQ----TTAQLKLSPYV---NYSFRVMAVNGIGKSLPSEASEQYLTKASEPDKNPTAVEG 755

Query: 312  --DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
               +P++  +       F  N    P L+  + W +     ++ S    V +N     V+
Sbjct: 756  LGSEPDNLVITWKPLNGFESNG---PGLQYKVSWRQKDGDDEWTS---VVVANVSKYIVS 809

Query: 370  KSSELDSGQYTCRAQTELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVSWNP 425
             +          +A  ++ F    A +T      +P+ AP N   + V+++  A V W+P
Sbjct: 810  GTPTFVPYLIKVQALNDMGFAPEPAVVTGHSGEDLPMVAPGNVR-VNVVNSTLAEVHWDP 868

Query: 426  VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK-----GESTTTEVDKFVPASKNFARV 480
            V  +S+RGH +GY++  W  +      R  I  K     G  T   +    P S     V
Sbjct: 869  VPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 928

Query: 481  LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
               NG   GP S    F TPEGVP    SL+ +     +  L+W  P  PNG+L  Y +K
Sbjct: 929  RVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVNPTLDSLTLEWDPPSHPNGILTEYTLK 988

Query: 541  YQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
            YQ +  T ++GPL++ ++P       T   L  L  ST+Y+ +    T AG G++
Sbjct: 989  YQPINSTHELGPLVDLKIP----ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQ 1039



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 137/605 (22%), Positives = 225/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 380 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 436 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 493

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 494 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIVKQ 551

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 552 PEYAVVQRGSMVSFECKVKHDHTLTLTVLWLKDNRELPSDERFTVDRDHLVVADVSDEDS 611

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 612 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 666

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A   
Sbjct: 667 WTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNG 726

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 727 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 785

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   +++  + E
Sbjct: 786 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDMGFAPEPAVVTGHSGE 842

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 843 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 902

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 903 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 955

Query: 616 NNLVI 620
           ++L I
Sbjct: 956 SSLKI 960



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 126/315 (40%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 E------HTHITDQPEDYEVEAGQSATFR--------CNAVSDPSLKLSIVWLRG----- 346
                  +  I     D E    +S+  R         NA +   L+ +++ L       
Sbjct: 238 VISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGL 297

Query: 347 SEPIDFESEP-------RFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             PI + ++        R V  N + +L +   SE DSG Y C A+  L  I    ++ V
Sbjct: 298 PTPIIYWAKEDGMLPKNRTVYKNFEKTLQIVHVSEADSGNYQCIAKNALGAIHHTISVRV 357

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 358 KAAPYWITAPQNLVL 372



 Score = 39.7 bits (91), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWI 253
           + C   ++L        +  L   P IT+    +Y +D +  +V+ C   G P P  +W 
Sbjct: 22  FLCQMISALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWT 81

Query: 254 HNQKELTGGRYTILE----TGDLKITDVAFADS----GEYTCFARNKLGTAQGSGSLTVK 305
            N       +  ++     TG L I  ++   +    G Y C ARN+ G A  +  +   
Sbjct: 82  RNGTHFDIDKDPLVTMKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRP 141

Query: 306 EHTHI--TDQPEDYEVEAGQSATFRC 329
             + +   ++ E   +++GQS    C
Sbjct: 142 SRSPLWTKEKLEPITLQSGQSLVLPC 167


>gi|348578151|ref|XP_003474847.1| PREDICTED: neurofascin isoform 2 [Cavia porcellus]
          Length = 1175

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 202/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 264 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 322

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 323 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 381

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 382 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 441

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 442 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 500

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED  V+ G +    C    D
Sbjct: 501 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIFRMPEDQVVKRGTTVQLECRVKHD 560

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSL+L++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 561 PSLRLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 617

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 618 HLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 647



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 154/671 (22%), Positives = 257/671 (38%), Gaps = 85/671 (12%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 162 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 220

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 221 KNPFTLKV-LTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLE 279

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 280 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 336

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 337 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 395

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 396 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 453

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 454 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 512

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   + V     V  +    H    ++
Sbjct: 513 CVATNILGKAENQVRLEVKDP-------TRIFRMPEDQVVKRGTTVQLECRVKHDPSLRL 565

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII---- 495
             +W + D    I   +  + +S T            F       G+Y    S  +    
Sbjct: 566 TVSWLKDDEPLYIGNRMKKEDDSLTI-----------FGVAERDQGSYTCVASTELDQDL 614

Query: 496 --SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
             + +T  G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   
Sbjct: 615 AKAHLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYIVQFEEDQ-FQPGVWH 673

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDN 607
           +   +   P + ++ +  L P   Y+  +    + G    S      +     P  NP +
Sbjct: 674 DHSKF---PGSVNSAVLQLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSD 730

Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667
           V+G G+  NN+ I+WT M       P+ +Y + WRR  T E WN  +V  W  S  V+  
Sbjct: 731 VKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQ 787

Query: 668 QPTFQPYEIKV 678
            P + PYEI+V
Sbjct: 788 TPVYVPYEIRV 798



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP++   ++V+++    + WN V   +++
Sbjct: 794  YEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVK-VRVLNSTAIGLQWNRVYSDTVQ 852

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+      + T   V +  P S     ++  NG  
Sbjct: 853  GQLREYRAYYWRESSLLKNLWVSQKRQQASFSSDRTRGVVGRLFPYSNYKLEMVVVNGRG 912

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L GY ++Y +  GT
Sbjct: 913  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILTGYTLRYVAFNGT 972

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   L   +P ++YR  L+  T+ G G
Sbjct: 973  KLGKQIVENF----SPNQTKFSLQRSDPVSRYRFTLSARTQVGSG 1013



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 120/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 52  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 111

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 112 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 171

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 172 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 231

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 232 HPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PD 289

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 290 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 347

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 348 APYWLDEPKNLIL 360



 Score = 47.8 bits (112), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 29/213 (13%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELT---GGRYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 32  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 91

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 92  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 146

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 147 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 202

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQVPLEAPSN 407
              Y+C A+      I+ +   T++V    P N
Sbjct: 203 QTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN 235


>gi|348578157|ref|XP_003474850.1| PREDICTED: neurofascin isoform 5 [Cavia porcellus]
          Length = 1170

 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 202/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 264 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 322

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 323 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 381

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 382 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 441

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 442 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 500

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED  V+ G +    C    D
Sbjct: 501 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIFRMPEDQVVKRGTTVQLECRVKHD 560

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSL+L++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 561 PSLRLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 617

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 618 HLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 647



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 154/671 (22%), Positives = 257/671 (38%), Gaps = 85/671 (12%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 162 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 220

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 221 KNPFTLKV-LTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLE 279

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 280 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 336

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 337 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 395

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 396 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 453

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 454 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 512

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   + V     V  +    H    ++
Sbjct: 513 CVATNILGKAENQVRLEVKDP-------TRIFRMPEDQVVKRGTTVQLECRVKHDPSLRL 565

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII---- 495
             +W + D    I   +  + +S T            F       G+Y    S  +    
Sbjct: 566 TVSWLKDDEPLYIGNRMKKEDDSLTI-----------FGVAERDQGSYTCVASTELDQDL 614

Query: 496 --SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
             + +T  G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   
Sbjct: 615 AKAHLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYIVQFEEDQ-FQPGVWH 673

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDN 607
           +   +   P + ++ +  L P   Y+  +    + G    S      +     P  NP +
Sbjct: 674 DHSKF---PGSVNSAVLQLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSD 730

Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667
           V+G G+  NN+ I+WT M       P+ +Y + WRR  T E WN  +V  W  S  V+  
Sbjct: 731 VKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQ 787

Query: 668 QPTFQPYEIKV 678
            P + PYEI+V
Sbjct: 788 TPVYVPYEIRV 798



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP++   ++V+++    + WN V   +++
Sbjct: 794  YEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVK-VRVLNSTAIGLQWNRVYSDTVQ 852

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+      + T   V +  P S     ++  NG  
Sbjct: 853  GQLREYRAYYWRESSLLKNLWVSQKRQQASFSSDRTRGVVGRLFPYSNYKLEMVVVNGRG 912

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L GY ++Y +  GT
Sbjct: 913  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILTGYTLRYVAFNGT 972

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   L   +P ++YR  L+  T+ G G
Sbjct: 973  KLGKQIVENF----SPNQTKFSLQRSDPVSRYRFTLSARTQVGSG 1013



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 120/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 52  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 111

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 112 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 171

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 172 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 231

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 232 HPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PD 289

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 290 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 347

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 348 APYWLDEPKNLIL 360



 Score = 47.8 bits (112), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 29/213 (13%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 32  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 91

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 92  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 146

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 147 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 202

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQVPLEAPSN 407
              Y+C A+      I+ +   T++V    P N
Sbjct: 203 QTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN 235


>gi|332237970|ref|XP_003268177.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Nomascus
           leucogenys]
          Length = 1211

 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 167/523 (31%), Positives = 243/523 (46%), Gaps = 36/523 (6%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  + P +R    N+ K+L I HV  +D G+Y C
Sbjct: 283 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIVHVSEADSGNYQC 340

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+   P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 341 IAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 399

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 400 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 459

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 460 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 519

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 520 TGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLTLTV 579

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  S+ RF    D+ L V   S+ DSG YTC A T LD + A A L+V  P
Sbjct: 580 LWLKDNR--ELPSDERFTVDRDH-LVVADVSDEDSGTYTCVANTTLDSVSASAVLSVVAP 636

Query: 402 LEAPS----------NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGS 451
              P+          +  L   +D K   +SW P    +       + ++        G 
Sbjct: 637 TPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWTPGDDNN--SPITKFIIEYEDAMHEPGL 693

Query: 452 IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPGT 506
                   G  TT ++ K  P      RV+A NG     PSE     +     P+  P  
Sbjct: 694 WHHQTEVSGTQTTAQL-KLSPYVNYSFRVMAVNGIGKSLPSEASEQYLTKASEPDKNPTA 752

Query: 507 VQSLEAIPLGSSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
           V+ L + P       + W KP    + NG  + YK+ ++   G
Sbjct: 753 VEGLGSEP---DNLVITW-KPLNGFESNGPGLQYKVSWRQKDG 791



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 147/564 (26%), Positives = 234/564 (41%), Gaps = 58/564 (10%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W    K     P N  R V  N    + I ++ ++D+GNY C A
Sbjct: 288 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIVHVSEADSGNYQCIA 342

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QK 257
            N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 343 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 401

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N+ G    +  + V         P +
Sbjct: 402 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPAN 461

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + + 
Sbjct: 462 TLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKD 518

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVP--LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            +G YTC A+ +L   + +  L ++ P  +     + ++Q    + ++VS+     +   
Sbjct: 519 STGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQ----RGSMVSF-----ECKV 569

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG--- 489
            H     +     KD     REL  +  E  T + D  V A  +      +    N    
Sbjct: 570 KHDHTLTLTVLWLKDN----RELPSD--ERFTVDRDHLVVADVSDEDSGTYTCVANTTLD 623

Query: 490 --PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIK 540
               S ++S V P   P  V  +   P           +  L W   +  N  +  + I+
Sbjct: 624 SVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIE 683

Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKY 596
           Y+        P L         T T+A+L  L P   Y   +      G      A  +Y
Sbjct: 684 YEDAMHE---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNGIGKSLPSEASEQY 739

Query: 597 LFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
           L     P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W    
Sbjct: 740 LTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS-- 797

Query: 655 VLDWRQSELVLANQPTFQPYEIKV 678
           V+    S+ +++  PTF PY IKV
Sbjct: 798 VVVANVSKYIVSGTPTFVPYLIKV 821



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 143/595 (24%), Positives = 239/595 (40%), Gaps = 69/595 (11%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
            + N+   L C F G+PLP   W K        + I   +   +L I   +    G+YTC 
Sbjct: 467  IANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCV 526

Query: 106  VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEIHWVHNG 163
              N +G AK+  + L +    +   +PE+        V+FECK          + W+ + 
Sbjct: 527  ARNKLGMAKN-EVHLEIKDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLTLTVLWLKDN 585

Query: 164  KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP---- 219
            +   + P + R  V  + + + ++   D+G Y C A  +L  V     ++V+A  P    
Sbjct: 586  R---ELPSDERFTVDRDHLVVADVSDEDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAP 642

Query: 220  --EITEAPKDEYTVD--GKTVVLT--------------CRVFGAPKPEVNWIHNQKELTG 261
              ++   P D    D   K+V L+                 +     E    H+Q E++G
Sbjct: 643  VYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSG 702

Query: 262  GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGS---------GSLTVKEHTHIT- 311
             +     T  LK++      +  +   A N +G +  S          S   K  T +  
Sbjct: 703  TQ----TTAQLKLSPYV---NYSFRVMAVNGIGKSLPSEASEQYLTKASEPDKNPTAVEG 755

Query: 312  --DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
               +P++  +       F  N    P L+  + W +     ++ S    V +N     V+
Sbjct: 756  LGSEPDNLVITWKPLNGFESNG---PGLQYKVSWRQKDGDDEWTS---VVVANVSKYIVS 809

Query: 370  KSSELDSGQYTCRAQTELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVSWNP 425
             +          +A  ++ F    A +T      +P+ AP N   + V+++  A V W+P
Sbjct: 810  GTPTFVPYLIKVQALNDMGFAPEPAVVTGHSGEDLPMVAPGNVR-VNVVNSTLAEVHWDP 868

Query: 426  VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK-----GESTTTEVDKFVPASKNFARV 480
            V  +S+RGH +GY++  W  +      R  I  K     G  T   +    P S     V
Sbjct: 869  VPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 928

Query: 481  LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
               NG   GP S    F TPEGVP    SL+ +     +  L+W  P  PNG+L  Y +K
Sbjct: 929  RVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVNPTLDSLTLEWDPPSHPNGILTEYTLK 988

Query: 541  YQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
            YQ +  T ++GPL++ ++P       T   L  L  ST+Y+ +    T AG G++
Sbjct: 989  YQPINSTHELGPLVDLKIPA----NKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQ 1039



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 137/605 (22%), Positives = 225/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 380 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 436 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 493

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 494 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIVKQ 551

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 552 PEYAVVQRGSMVSFECKVKHDHTLTLTVLWLKDNRELPSDERFTVDRDHLVVADVSDEDS 611

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 612 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 666

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A   
Sbjct: 667 WTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNG 726

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 727 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 785

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   +++  + E
Sbjct: 786 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDMGFAPEPAVVTGHSGE 842

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 843 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 902

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 903 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 955

Query: 616 NNLVI 620
           ++L I
Sbjct: 956 SSLKI 960



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 126/315 (40%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 E------HTHITDQPEDYEVEAGQSATFR--------CNAVSDPSLKLSIVWLRG----- 346
                  +  I     D E    +S+  R         NA +   L+ +++ L       
Sbjct: 238 VISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGL 297

Query: 347 SEPIDFESEP-------RFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             PI + ++        R V  N + +L +   SE DSG Y C A+  L  I    ++ V
Sbjct: 298 PTPIIYWAKEDGMLPKNRTVYKNFEKTLQIVHVSEADSGNYQCIAKNALGAIHHTISVRV 357

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 358 KAAPYWITAPQNLVL 372



 Score = 39.7 bits (91), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWI 253
           + C   ++L        +  L   P IT+    +Y +D +  +V+ C   G P P  +W 
Sbjct: 22  FLCQMISALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWT 81

Query: 254 HNQKELTGGRYTILE----TGDLKITDVAFADS----GEYTCFARNKLGTAQGSGSLTVK 305
            N       +  ++     TG L I  ++   +    G Y C ARN+ G A  +  +   
Sbjct: 82  RNGTHFDIDKDPLVTMKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRP 141

Query: 306 EHTHI--TDQPEDYEVEAGQSATFRC 329
             + +   ++ E   +++GQS    C
Sbjct: 142 SRSPLWTKEKLEPITLQSGQSLVLPC 167


>gi|348578153|ref|XP_003474848.1| PREDICTED: neurofascin isoform 3 [Cavia porcellus]
          Length = 1158

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 202/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 247 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 305

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 306 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 364

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 365 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 424

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 425 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 483

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED  V+ G +    C    D
Sbjct: 484 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIFRMPEDQVVKRGTTVQLECRVKHD 543

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSL+L++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 544 PSLRLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 600

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 601 HLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 630



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 150/654 (22%), Positives = 256/654 (39%), Gaps = 68/654 (10%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 162 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 220

Query: 113 AKSYSIDLSVLAA-----PYFTVEPEFINAAEE----ETVTFECKASGLPEPEIHWVHNG 163
              +++ +          P F + P+  ++++       +  EC ASG+P P+I W   G
Sbjct: 221 KNPFTLKVLTTRGVAERTPSF-MYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKG 279

Query: 164 KPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
             +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP   
Sbjct: 280 GDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYWL 335

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDV 277
           + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D 
Sbjct: 336 DEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRDT 393

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
             +    Y C   N+ G    +  ++V +       P +  +        R +     S 
Sbjct: 394 QISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSP 453

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
             ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L 
Sbjct: 454 IPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRLE 512

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIRELI 456
           V+ P       T I  +   + V     V  +    H    ++  +W + D    I   +
Sbjct: 513 VKDP-------TRIFRMPEDQVVKRGTTVQLECRVKHDPSLRLTVSWLKDDEPLYIGNRM 565

Query: 457 VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII------SFVTPEGVPGTVQSL 510
             + +S T            F       G+Y    S  +      + +T  G P   + L
Sbjct: 566 KKEDDSLTI-----------FGVAERDQGSYTCVASTELDQDLAKAHLTVLGRPDRPRDL 614

Query: 511 EAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
           E   L   +  L W+  +  N  +  Y ++++  +  + G   +   +   P + ++ + 
Sbjct: 615 ELTDLAERSVRLTWIPGDDNNSPITDYIVQFEEDQ-FQPGVWHDHSKF---PGSVNSAVL 670

Query: 571 GLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTA 624
            L P   Y+  +    + G    S      +     P  NP +V+G G+  NN+ I+WT 
Sbjct: 671 QLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTP 730

Query: 625 MPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           M       P+ +Y + WRR  T E WN  +V  W  S  V+   P + PYEI+V
Sbjct: 731 MNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQTPVYVPYEIRV 781



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379 YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           Y  R Q E DF +     TV        P  AP++   ++V+++    + WN V   +++
Sbjct: 777 YEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVK-VRVLNSTAIGLQWNRVYSDTVQ 835

Query: 433 GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
           G  R Y+   W E     ++     R+      + T   V +  P S     ++  NG  
Sbjct: 836 GQLREYRAYYWRESSLLKNLWVSQKRQQASFSSDRTRGVVGRLFPYSNYKLEMVVVNGRG 895

Query: 488 NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
           +GP SE   F TPEGVP   +             L+W  PE PNG+L GY ++Y +  GT
Sbjct: 896 DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILTGYTLRYVAFNGT 955

Query: 548 KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           K+G  ++E       P  T   L   +P ++YR  L+  T+ G G
Sbjct: 956 KLGKQIVENF----SPNQTKFSLQRSDPVSRYRFTLSARTQVGSG 996



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 120/296 (40%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 52  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 111

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 112 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 171

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T 
Sbjct: 172 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 231

Query: 310 --ITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             + ++   +    G S++            C A   P+    I W +     D  S+  
Sbjct: 232 RGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 287

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 288 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 343



 Score = 46.2 bits (108), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 29/206 (14%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 32  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 91

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 92  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 146

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 147 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 202

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQV 400
              Y+C A+      I+ +   T++V
Sbjct: 203 QTDYSCNARFHFTHTIQQKNPFTLKV 228


>gi|395838780|ref|XP_003792284.1| PREDICTED: neurofascin isoform 1 [Otolemur garnettii]
          Length = 1347

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 135/373 (36%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 252 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 310

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 311 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 369

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 370 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 429

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 430 PRMM-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 488

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 489 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 548

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   S    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 549 PSLKLTVSWLKDDEPLYIGSR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 605

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 606 YLTVLADQVTPTN 618



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 151/664 (22%), Positives = 262/664 (39%), Gaps = 73/664 (10%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV----SNGVGEA 113
           G P P   W    + PI    R+SQG+ G       ++   Q  Y+C      ++ + + 
Sbjct: 167 GLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMQQDMQTDYSCNARFHFTHTIQQK 226

Query: 114 KSYSIDLSVLAA-----PYFTVEPEFINAAEE----ETVTFECKASGLPEPEIHWVHNGK 164
             +++ +          P F + P+  ++++       +  EC ASG+P P+I W   G 
Sbjct: 227 NPFTLKVLTTRGVAERTPSF-MYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGG 285

Query: 165 PISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP   +
Sbjct: 286 DL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYWLD 341

Query: 224 APKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDVA 278
            PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D  
Sbjct: 342 EPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRDTQ 399

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            +    Y C   N+ G    +  ++V +       P +  +        R +     S  
Sbjct: 400 ISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMMSPRNQLIRVILYNRTRLDCPFFGSPI 459

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
            ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L V
Sbjct: 460 PTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV 518

Query: 399 QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIRELIV 457
           + P       T I  +   +       V  +    H    K+  +W + D    I   + 
Sbjct: 519 KDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGSRMK 571

Query: 458 NKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 500
            + +S T                 TE+D+ +  +K +  VLA       P + + +   P
Sbjct: 572 KEDDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLADQVT---PTNRLAAL--P 624

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560
           +G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   +  
Sbjct: 625 KGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKF-- 681

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGST 614
            P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G+ 
Sbjct: 682 -PGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTR 740

Query: 615 PNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPY 674
            NN+ I+WT M       P+ +Y + WRR  T EAW+   V  W  S  V+   P + PY
Sbjct: 741 KNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWSNATV--W-GSRYVVGQTPVYVPY 797

Query: 675 EIKV 678
           EI+V
Sbjct: 798 EIRV 801



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 98/224 (43%), Gaps = 15/224 (6%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP+    I+V+++    + WN V P +++
Sbjct: 797  YEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTEVK-IRVMNSTAISLQWNRVYPDTVQ 855

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 856  GQLREYRAYYWRESSLLKNLWVSQKRQQAGFSGDRLRGVVSRLFPYSNYKLEMVVVNGRG 915

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L GY ++Y    GT
Sbjct: 916  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILTGYTLRYVPFNGT 975

Query: 548  KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            KVG   +++     P  T   +   +P ++YR  L+  T+ G G
Sbjct: 976  KVG---KQIVESFSPNQTKFTVQRADPVSRYRFTLSARTQVGSG 1016



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 119/296 (40%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P   W  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 57  DNILIECEAKGNPAPSFQWTRNSRYFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 116

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 117 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 176

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T 
Sbjct: 177 SSSMEPITQDKRVSQGHNGDLYFSNVMQQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 236

Query: 310 --ITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             + ++   +    G S++            C A   P+    I W +     D  S+  
Sbjct: 237 RGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 292

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 293 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 348



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 29/206 (14%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P   W  N +        R ++    
Sbjct: 37  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFQWTRNSRYFNIAKDPRVSMRRRS 96

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 97  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 151

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +   + D 
Sbjct: 152 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMQQDM 207

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQV 400
              Y+C A+      I+ +   T++V
Sbjct: 208 QTDYSCNARFHFTHTIQQKNPFTLKV 233


>gi|395838782|ref|XP_003792285.1| PREDICTED: neurofascin isoform 2 [Otolemur garnettii]
          Length = 1261

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 135/373 (36%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 273 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 331

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 332 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 390

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 391 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 450

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 451 PRMM-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 509

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 510 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 569

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   S    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 570 PSLKLTVSWLKDDEPLYIGSR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 626

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 627 YLTVLADQVTPTN 639



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 151/664 (22%), Positives = 262/664 (39%), Gaps = 73/664 (10%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV----SNGVGEA 113
           G P P   W    + PI    R+SQG+ G       ++   Q  Y+C      ++ + + 
Sbjct: 188 GLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMQQDMQTDYSCNARFHFTHTIQQK 247

Query: 114 KSYSIDLSVLAA-----PYFTVEPEFINAAEE----ETVTFECKASGLPEPEIHWVHNGK 164
             +++ +          P F + P+  ++++       +  EC ASG+P P+I W   G 
Sbjct: 248 NPFTLKVLTTRGVAERTPSF-MYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGG 306

Query: 165 PISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP   +
Sbjct: 307 DL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYWLD 362

Query: 224 APKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDVA 278
            PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D  
Sbjct: 363 EPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRDTQ 420

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            +    Y C   N+ G    +  ++V +       P +  +        R +     S  
Sbjct: 421 ISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMMSPRNQLIRVILYNRTRLDCPFFGSPI 480

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
            ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L V
Sbjct: 481 PTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV 539

Query: 399 QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIRELIV 457
           + P       T I  +   +       V  +    H    K+  +W + D    I   + 
Sbjct: 540 KDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGSRMK 592

Query: 458 NKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 500
            + +S T                 TE+D+ +  +K +  VLA       P + + +   P
Sbjct: 593 KEDDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLADQVT---PTNRLAAL--P 645

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560
           +G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   +  
Sbjct: 646 KGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKF-- 702

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGST 614
            P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G+ 
Sbjct: 703 -PGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTR 761

Query: 615 PNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPY 674
            NN+ I+WT M       P+ +Y + WRR  T EAW+   V  W  S  V+   P + PY
Sbjct: 762 KNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWSNATV--W-GSRYVVGQTPVYVPY 818

Query: 675 EIKV 678
           EI+V
Sbjct: 819 EIRV 822



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 144/571 (25%), Positives = 226/571 (39%), Gaps = 49/571 (8%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P   W  +G P+     NP+  ++    G ++I +  + S +  Y C  S
Sbjct: 377 LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVA----GDTIIFRDTQISSRAVYQCNTS 432

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  +SVL  P   + P  + I          +C   G P P + W  NG+ 
Sbjct: 433 NEHGYLLANAF-VSVLDVPPRMMSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQG 491

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            +    N    V  N  + I+ +RK D G Y C ATN LG     V + V      I   
Sbjct: 492 SNLDGGN--YHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRM 548

Query: 225 PKDEYTVDGKTVVLTCRVFGAP--KPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+D+    G TV L CRV   P  K  V+W+ + + L  G     E   L I  VA  D 
Sbjct: 549 PEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGSRMKKEDDSLTIFGVAERDQ 608

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK-LSI 341
           G YTC A  +L        LTV     +T       +  G+    R   ++D + + + +
Sbjct: 609 GSYTCVASTELDQDLAKAYLTVLAD-QVTPTNRLAALPKGRPDRPRDLELTDLAERSVRL 667

Query: 342 VWLRGSE---PI-----DFESEPRFVQS--NDYSL-------TVTKSSELDSGQYTCRAQ 384
            W+ G +   PI      FE E +F     +D+S         V + S   + Q+   A 
Sbjct: 668 TWIPGDDNNSPITDYVVQFE-EDQFQPGVWHDHSKFPGSVNSAVLRLSPYVNYQFRVIAI 726

Query: 385 TELDF----IEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
            E+      + ++   T   P E+  +    +        ++W P++  S  G    Y V
Sbjct: 727 NEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIV 786

Query: 441 QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 500
           + W  ++   +     V        +   +VP      RV A N    GP  + +   + 
Sbjct: 787 K-WRRRETREAWSNATVWGSRYVVGQTPVYVPYE---IRVQAENDFGKGPEPDTVIGYSG 842

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560
           E +P   +             L+W  PE PNG+L GY ++Y    GTKVG   +++    
Sbjct: 843 EDLPSAPRRFRVRQPNLETINLEWDHPEHPNGILTGYTLRYVPFNGTKVG---KQIVESF 899

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            P  T   +   +P ++YR  L+  T+ G G
Sbjct: 900 SPNQTKFTVQRADPVSRYRFTLSARTQVGSG 930



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 119/296 (40%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P   W  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 78  DNILIECEAKGNPAPSFQWTRNSRYFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 137

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 138 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 197

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T 
Sbjct: 198 SSSMEPITQDKRVSQGHNGDLYFSNVMQQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 257

Query: 310 --ITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             + ++   +    G S++            C A   P+    I W +     D  S+  
Sbjct: 258 RGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 313

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 314 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 369



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 29/206 (14%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P   W  N +        R ++    
Sbjct: 58  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFQWTRNSRYFNIAKDPRVSMRRRS 117

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 118 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 172

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +   + D 
Sbjct: 173 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMQQDM 228

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQV 400
              Y+C A+      I+ +   T++V
Sbjct: 229 QTDYSCNARFHFTHTIQQKNPFTLKV 254


>gi|237858627|ref|NP_001153787.1| neurofascin isoform 4 precursor [Rattus norvegicus]
          Length = 1157

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 200/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 246 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 304

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 305 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 363

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 364 WLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 423

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 424 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 482

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 483 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 542

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 543 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKA 599

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 600 YLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 629



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 150/654 (22%), Positives = 255/654 (38%), Gaps = 68/654 (10%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAA-----PYFTVEPEFINAAEE----ETVTFECKASGLPEPEIHWVHNG 163
              +++ +          P F + P+  ++++       +  EC ASG+P P+I W   G
Sbjct: 220 KNPFTLKVLTTRGVAERTPSF-MYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKG 278

Query: 164 KPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
             +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP   
Sbjct: 279 GDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYWL 334

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDV 277
           + PK+     G+   L CR  G PKP V W+ N   L        R    +T  +   D 
Sbjct: 335 DEPKNLILAPGEDGRLVCRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDT--IIFRDT 392

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
             +    Y C   N+ G    +  ++V +       P +  +        R +     S 
Sbjct: 393 QISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSP 452

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
             ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L 
Sbjct: 453 IPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRLE 511

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIRELI 456
           V+ P       T I  +   +       V  +    H    K+  +W + D    I   +
Sbjct: 512 VKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRM 564

Query: 457 VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII------SFVTPEGVPGTVQSL 510
             + +S T            F       G+Y    S  +      +++T  G P   + L
Sbjct: 565 KKEDDSLTI-----------FGVAERDQGSYTCMASTELDQDLAKAYLTVLGRPDRPRDL 613

Query: 511 EAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
           E   L   +  L W+  +  N  +  Y ++++  +  + G   +   +   P + ++ + 
Sbjct: 614 ELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKF---PGSVNSAVL 669

Query: 571 GLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTA 624
            L P   Y+  +    + G    S      +     P  NP +V+G G+  NN+ I+WT 
Sbjct: 670 HLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTP 729

Query: 625 MPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           M       P+ +Y + WRR  T E WN  +V  W  S  V+   P + PYEI+V
Sbjct: 730 MNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQTPVYVPYEIRV 780



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 17/225 (7%)

Query: 379 YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           Y  R Q E DF +     TV        P  AP+    I+V+++    + WN V   +++
Sbjct: 776 YEIRVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVK-IRVLNSTAISLQWNRVYSDTVQ 834

Query: 433 GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
           G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 835 GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVGRLFPYSNYKLEMVVVNGRG 894

Query: 488 NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
           +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY ++Y    GT
Sbjct: 895 DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLRYVPFNGT 954

Query: 548 KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 955 KLGKQMVENF----SPNQTKFSVQRADPVSRYRFSLSARTQVGSG 995



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 120/296 (40%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T 
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 230

Query: 310 --ITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             + ++   +    G S++            C A   P+    I W +     D  S+  
Sbjct: 231 RGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 286

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 287 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 342



 Score = 46.2 bits (108), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 29/206 (14%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQV 400
              Y+C A+      I+ +   T++V
Sbjct: 202 QTDYSCNARFHFTHTIQQKNPFTLKV 227


>gi|348578155|ref|XP_003474849.1| PREDICTED: neurofascin isoform 4 [Cavia porcellus]
          Length = 1239

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 194/373 (52%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 253 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 311

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 312 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 370

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 371 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 430

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 431 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 489

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED  V+ G +    C    D
Sbjct: 490 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIFRMPEDQVVKRGTTVQLECRVKHD 549

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSL+L++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 550 PSLRLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 606

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 607 HLTVLADQATPTN 619



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 154/665 (23%), Positives = 264/665 (39%), Gaps = 75/665 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 168 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 226

Query: 113 AKSYSIDLSVLAA-----PYFTVEPEFINAAEE----ETVTFECKASGLPEPEIHWVHNG 163
              +++ +          P F + P+  ++++       +  EC ASG+P P+I W   G
Sbjct: 227 KNPFTLKVLTTRGVAERTPSF-MYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKG 285

Query: 164 KPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
             +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP   
Sbjct: 286 GDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYWL 341

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDV 277
           + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D 
Sbjct: 342 DEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRDT 399

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
             +    Y C   N+ G    +  ++V +       P +  +        R +     S 
Sbjct: 400 QISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSP 459

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
             ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L 
Sbjct: 460 IPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRLE 518

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIRELI 456
           V+ P       T I  +   + V     V  +    H    ++  +W + D    I   +
Sbjct: 519 VKDP-------TRIFRMPEDQVVKRGTTVQLECRVKHDPSLRLTVSWLKDDEPLYIGNRM 571

Query: 457 VNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
             + +S T                 TE+D+ +  +K    VLA       P + + +   
Sbjct: 572 KKEDDSLTIFGVAERDQGSYTCVASTELDQDL--AKAHLTVLADQAT---PTNRLAAL-- 624

Query: 500 PEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
           P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   + 
Sbjct: 625 PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYIVQFEEDQ-FQPGVWHDHSKF- 682

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGS 613
             P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G+
Sbjct: 683 --PGSVNSAVLQLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGT 740

Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
             NN+ I+WT M       P+ +Y + WRR  T E WN  +V  W  S  V+   P + P
Sbjct: 741 RKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQTPVYVP 797

Query: 674 YEIKV 678
           YEI+V
Sbjct: 798 YEIRV 802



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 120/296 (40%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 58  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 117

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 118 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 177

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T 
Sbjct: 178 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 237

Query: 310 --ITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             + ++   +    G S++            C A   P+    I W +     D  S+  
Sbjct: 238 RGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 293

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 294 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 349



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 9/172 (5%)

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           ++W P++  S  G    Y V+ W  ++   +   + V        +   +VP      RV
Sbjct: 747 ITWTPMNATSAFGPNLRYIVK-WRRRETRETWNNVTVWGSRYVVGQTPVYVPYE---IRV 802

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
            A N    GP  + +   + E +P   +             L+W  PE PNG+L GY ++
Sbjct: 803 QAENDFGKGPEPDTVIGYSGEDLPSAPRRFRVRQPNLETINLEWDHPEHPNGILTGYTLR 862

Query: 541 YQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           Y +  GTK+G  ++E       P  T   L   +P ++YR  L+  T+ G G
Sbjct: 863 YVAFNGTKLGKQIVENF----SPNQTKFSLQRSDPVSRYRFTLSARTQVGSG 910



 Score = 47.4 bits (111), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++  
Sbjct: 36  NELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 95

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
                + D           GEY CFARNK GTA     L+ +    ++  P    E+ + 
Sbjct: 96  RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 150

Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 151 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 206

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
           D    Y+C A+      I+ +   T++V
Sbjct: 207 DMQTDYSCNARFHFTHTIQQKNPFTLKV 234


>gi|353229965|emb|CCD76136.1| septate junction protein [Schistosoma mansoni]
          Length = 1354

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 195/657 (29%), Positives = 267/657 (40%), Gaps = 116/657 (17%)

Query: 24  ISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQG 83
           +   Q+ +  K  Y + + E A     V+L CI+ G P PQ  W KD         +   
Sbjct: 122 VHGQQSTYPVKTDYRSPRTEDAAVGDIVQLRCIYSGYPEPQYTWFKDESEKITLPNVKIK 181

Query: 84  NYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSID----LSVLAAPYFTVEPEFINAAE 139
           N G  L I  V     G Y C+   G+ E    +++    + V   P F  +PE I    
Sbjct: 182 NMGTMLEINPVTIESAGEYRCQ---GINEVTKNTVNSQFTVFVRVRPKFIEKPEDITVPV 238

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA 199
             +VTF C ASG P P+I W  NG+  S      R+ +  N + + NL   D+    CNA
Sbjct: 239 NGSVTFRCTASGDPPPKIRWTINGEDPSSYLDGVRKVLHGNTMQLSNLTIKDSAVIQCNA 298

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE 258
           +N  GY + + YVNV+  AP   + P+     VDG  V L C+ F APK  ++W  +++ 
Sbjct: 299 SNKFGYAFTNAYVNVMREAPYFMKPPESVVRAVDGNQVTLFCQTFSAPKAIISWTKDRRP 358

Query: 259 LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYE 318
           + GGRY IL +GDL I  VA  DSG Y C A N  G+ + SG L V+  T I   P +  
Sbjct: 359 INGGRYKILTSGDLFIESVAITDSGVYECTATNPFGSKKASGKLLVRRKTRIVLAPINTR 418

Query: 319 VEAGQSATFRCNAVSDPS--LKLSIVWLRGSEPIDFESEPRFVQS-NDYSLTVTKSSELD 375
           V       F C A +DP+    L I W +    ID    PR  Q   DY+L ++ +   D
Sbjct: 419 VYENDVVKFVCTAETDPAEVSNLKITWYKDDNYIDPNLTPRIQQVWFDYALVLSGAQPRD 478

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTL--IQVIDAKKAVVSWNPVSPQSLRG 433
           +GQY C A   LDF  A A L VQ   E   N  +  +  I+ + A+++W P S      
Sbjct: 479 TGQYRCNASNGLDFDTATAPLLVQGRPEQAINVQVNCVDFINEELALITWYPGS------ 532

Query: 434 HFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
                        D    I E IV    ST  E D + PA                   E
Sbjct: 533 -------------DNYAPIMEYIVEY--STQFERDTWYPA-------------------E 558

Query: 494 IISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT--KVGP 551
           I +        G VQS                       V++   I+YQ    T  +VG 
Sbjct: 559 IFNLT------GLVQSTSV-------------------KVVLRPNIQYQFRVRTRNRVGV 593

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGR 611
            L      S PTT +  + G  PS                            NP  +   
Sbjct: 594 SLP-----SQPTTKTCGIPGRVPSV---------------------------NPRELYVF 621

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE----AWNQDDVLDWRQSELV 664
           G+  NNLVI WT +P IEHN  +  Y +  +  N       A N   + DWR   +V
Sbjct: 622 GTIGNNLVIRWTTLPFIEHNGNNLGYILTVQCLNCASVQSNAINTTVIGDWRTDRIV 678



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 2/125 (1%)

Query: 471  VPASKNFAR-VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQ 529
            VP + N    V      Y GP S I+  +T  G+ G + +L+A  +  +   + W  P +
Sbjct: 930  VPGATNIKLWVRVLTNKYAGPASPIVELMTSGGLSGPISNLKADAISVNYIDVSWSIPTE 989

Query: 530  PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
            PNG ++GY+++   + G  VG    R P I+D ++TS +++ L+ +T YRI +   T AG
Sbjct: 990  PNGYIIGYELEAMELNGLDVGYGF-RYPPITDNSSTSYRMSRLKGNTTYRITIWPITGAG 1048

Query: 590  DGAES 594
             G ++
Sbjct: 1049 LGIDN 1053


>gi|51095143|gb|EAL24386.1| neuronal cell adhesion molecule [Homo sapiens]
 gi|119603835|gb|EAW83429.1| neuronal cell adhesion molecule, isoform CRA_c [Homo sapiens]
          Length = 1183

 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 165/513 (32%), Positives = 240/513 (46%), Gaps = 26/513 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  + P +R    N+ K+L I HV  +D G+Y C
Sbjct: 277 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIIHVSEADSGNYQC 334

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+   P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 335 IAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 393

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 394 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 453

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 454 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 513

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 514 TGTYTCVARNKLGMAKNEVHLEIKDATWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTV 573

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  S+ RF    D+ L V   S+ DSG YTC A T LD + A A L+V   
Sbjct: 574 LWLKDNR--ELPSDERFTVDKDH-LVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDV 630

Query: 402 LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGE 461
              P +  L   +D K   +SW P    +       + ++        G         G 
Sbjct: 631 PNPPFDLELTDQLD-KSVQLSWTPGDDNN--SPITKFIIEYEDAMHKPGLWHHQTEVSGT 687

Query: 462 STTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPGTVQSLEAIPLG 516
            TT ++ K  P      RV+A N      PSE     +     P+  P  V+ L + P  
Sbjct: 688 QTTAQL-KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEP-- 744

Query: 517 SSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
                + W KP    + NG  + YK+ ++   G
Sbjct: 745 -DNLVITW-KPLNGFESNGPGLQYKVSWRQKDG 775



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 148/555 (26%), Positives = 228/555 (41%), Gaps = 50/555 (9%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W    K     P N  R V  N    + I ++ ++D+GNY C A
Sbjct: 282 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 336

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK-- 257
            N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 337 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 395

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N+ G    +  + V         P +
Sbjct: 396 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPAN 455

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + + 
Sbjct: 456 TLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKD 512

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
            +G YTC A+ +L   + +  L ++       + T I        V   + VS +    H
Sbjct: 513 STGTYTCVARNKLGMAKNEVHLEIK-------DATWIVKQPEYAVVQRGSMVSFECKVKH 565

Query: 435 FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG----- 489
                +     KD     REL  +  E  T + D  V A  +      +    N      
Sbjct: 566 DHTLSLTVLWLKDN----RELPSD--ERFTVDKDHLVVADVSDDDSGTYTCVANTTLDSV 619

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
             S ++S V    VP     LE       +  L W   +  N  +  + I+Y+       
Sbjct: 620 SASAVLSVV---DVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHK-- 674

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV--PFK 603
            P L         T T+A+L  L P   Y   +      G      A  +YL     P K
Sbjct: 675 -PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDK 732

Query: 604 NPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSEL 663
           NP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W    V+    S+ 
Sbjct: 733 NPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS--VVVANVSKY 790

Query: 664 VLANQPTFQPYEIKV 678
           +++  PTF PY IKV
Sbjct: 791 IVSGTPTFVPYLIKV 805



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 828  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 886

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 887  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 946

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 947  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIP----ANKTRWTLKNL 1002

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1003 NFSTRYKFYFYAQTSAGSGSQ 1023



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 142/605 (23%), Positives = 232/605 (38%), Gaps = 71/605 (11%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 374 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 429

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 430 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 487

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +   A  I + 
Sbjct: 488 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDATWIVKQ 545

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 546 PEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDS 605

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V +   + + P D E+              D S++LS  
Sbjct: 606 GTYTCVANTTLDSVSASAVLSVVD---VPNPPFDLELTDQL----------DKSVQLS-- 650

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 651 WTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 710

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 711 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 769

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 770 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDMGFAPEPAVVMGHSGE 826

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 827 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 886

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 887 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 939

Query: 616 NNLVI 620
           ++L I
Sbjct: 940 SSLKI 944



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 134/344 (38%), Gaps = 57/344 (16%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNG-------K 164
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  ISALEVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKD 86

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDT--GNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           P+    P      G   I I +  K++T  G Y C A N  G    +  V   + +P  T
Sbjct: 87  PLVTMKPG----TGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWT 142

Query: 223 EAPKDEYTVD-GKTVVLTCRVFGAPKPEVN-WIHN--QKELTGGRYTILETGDLKITDVA 278
           +   +  T+  G+++VL CR      P +  W+ N  Q+     R +    GDL  ++V 
Sbjct: 143 KEKLEPITLQSGQSLVLPCRPPIGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVL 202

Query: 279 FADSGE-YTCFAR-NKLGTAQGSGSLTVKE------HTHITDQPEDYEVEAGQSATFR-- 328
             D+ E Y C+AR N   T Q    ++VK       +  I     D E    +S+  R  
Sbjct: 203 PEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFYGAKSSRERPP 262

Query: 329 ------CNAVSDPSLKLSIVWLRG-----SEPIDFESEP-------RFVQSN-DYSLTVT 369
                  NA +   L+ +++ L         PI + ++        R V  N + +L + 
Sbjct: 263 TFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQII 322

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             SE DSG Y C A+  L  I    ++ V+     + AP N  L
Sbjct: 323 HVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLVL 366


>gi|348578149|ref|XP_003474846.1| PREDICTED: neurofascin isoform 1 [Cavia porcellus]
          Length = 1190

 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 194/373 (52%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 264 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 322

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 323 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 381

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 382 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 441

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 442 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 500

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED  V+ G +    C    D
Sbjct: 501 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIFRMPEDQVVKRGTTVQLECRVKHD 560

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSL+L++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 561 PSLRLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 617

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 618 HLTVLADQATPTN 630



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 158/682 (23%), Positives = 265/682 (38%), Gaps = 92/682 (13%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 162 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 220

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 221 KNPFTLKV-LTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLE 279

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 280 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 336

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 337 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 395

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 396 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 453

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 454 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 512

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   + V     V  +    H    ++
Sbjct: 513 CVATNILGKAENQVRLEVKDP-------TRIFRMPEDQVVKRGTTVQLECRVKHDPSLRL 565

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTT-----------------TEVDKFVPASKNFARVLA 482
             +W + D    I   +  + +S T                 TE+D+ +  +K    VLA
Sbjct: 566 TVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDL--AKAHLTVLA 623

Query: 483 FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
                  P + + +   P+G P   + LE   L   +  L W+  +  N  +  Y ++++
Sbjct: 624 DQAT---PTNRLAAL--PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYIVQFE 678

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KY 596
             +  + G   +   +   P + ++ +  L P   Y+  +    + G    S      + 
Sbjct: 679 EDQ-FQPGVWHDHSKF---PGSVNSAVLQLSPYVNYQFRVIAINEVGSSHPSLPSERYRT 734

Query: 597 LFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVL 656
               P  NP +V+G G+  NN+ I+WT M       P+ +Y + WRR  T E WN  +V 
Sbjct: 735 SGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVT 792

Query: 657 DWRQSELVLANQPTFQPYEIKV 678
            W  S  V+   P + PYEI+V
Sbjct: 793 VW-GSRYVVGQTPVYVPYEIRV 813



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP++   ++V+++    + WN V   +++
Sbjct: 809  YEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVK-VRVLNSTAIGLQWNRVYSDTVQ 867

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+      + T   V +  P S     ++  NG  
Sbjct: 868  GQLREYRAYYWRESSLLKNLWVSQKRQQASFSSDRTRGVVGRLFPYSNYKLEMVVVNGRG 927

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L GY ++Y +  GT
Sbjct: 928  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILTGYTLRYVAFNGT 987

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   L   +P ++YR  L+  T+ G G
Sbjct: 988  KLGKQIVENF----SPNQTKFSLQRSDPVSRYRFTLSARTQVGSG 1028



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 120/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 52  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 111

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 112 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 171

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 172 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 231

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 232 HPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PD 289

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 290 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 347

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 348 APYWLDEPKNLIL 360



 Score = 47.8 bits (112), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 29/213 (13%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 32  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 91

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 92  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 146

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 147 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 202

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQVPLEAPSN 407
              Y+C A+      I+ +   T++V    P N
Sbjct: 203 QTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN 235


>gi|291402555|ref|XP_002717616.1| PREDICTED: neurofascin isoform 1 [Oryctolagus cuniculus]
          Length = 1174

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 201/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 263 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 321

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 322 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLVLAPGEDGRLVCRANGNPKPTVQ 380

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 381 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 440

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 441 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVHENGSLEI 499

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 500 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 559

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 560 PSLKLTVSWLKDEEPLYISNR---MKKEDDSLTIFGVAEKDQGSYTCVASTELDQDLAKA 616

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 617 YLTVMGRPDRPRDLELTDLAE-RSVRLTWIP 646



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 156/670 (23%), Positives = 257/670 (38%), Gaps = 83/670 (12%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVILQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 220 KNPFTLKV-LTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLE 278

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 279 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 335

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 336 IRHTISVRVKA-APYWLDEPKNLVLAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 394

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 395 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 452

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 453 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVHENG-SLEIKMIRKEDQGIYT 511

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 512 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKL 564

Query: 441 QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII----- 495
                KD E      I N+ +     +  F  A K+        G+Y    S  +     
Sbjct: 565 TVSWLKDEEPL---YISNRMKKEDDSLTIFGVAEKD-------QGSYTCVASTELDQDLA 614

Query: 496 -SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLE 554
            +++T  G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +
Sbjct: 615 KAYLTVMGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQ-FQPGVWHD 673

Query: 555 RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNV 608
              +   P   ++ +  L P   Y+  +    + G    S      +     P  NP +V
Sbjct: 674 HSKF---PGNVNSAVLQLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDV 730

Query: 609 EGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQ 668
           +G G+  NN+ I+WT M       P+ +Y + WRR  T +AWN   V  W  S  V+   
Sbjct: 731 KGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRDAWNNATV--W-GSRYVVGQT 787

Query: 669 PTFQPYEIKV 678
           P + PYEI+V
Sbjct: 788 PVYVPYEIRV 797



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 100/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +A    TV        P  AP++   ++V+++    + WN V   +++
Sbjct: 793  YEIRVQAENDFGKAPEPETVIGYSGEDYPRAAPTDVK-VRVMNSTAISLQWNRVYSDTVQ 851

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 852  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVSQLFPYSNYKLEMVVVNGRG 911

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY +KY    GT
Sbjct: 912  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILVGYTLKYLPFNGT 971

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 972  KLGKQIVENF----SPNQTKFTVQRADPVSRYRFTLSARTQVGSG 1012



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 120/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVILQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 230

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 231 HPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PD 288

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 289 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 346

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 347 APYWLDEPKNLVL 359



 Score = 47.4 bits (111), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 35/216 (16%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSND----YSLTVTKSS 372
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++    +S  + +  
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVILQDM 201

Query: 373 ELDSGQYTCRAQTELDF-IEAQATLTVQVPLEAPSN 407
           + D   Y+C A+      I+ +   T++V    P N
Sbjct: 202 QTD---YSCNARFHFTHTIQQKNPFTLKVLTNHPYN 234


>gi|291402557|ref|XP_002717617.1| PREDICTED: neurofascin isoform 2 [Oryctolagus cuniculus]
          Length = 1157

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 201/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 246 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 304

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 305 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLVLAPGEDGRLVCRANGNPKPTVQ 363

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 364 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 423

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 424 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVHENGSLEI 482

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 483 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 542

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 543 PSLKLTVSWLKDEEPLYISNR---MKKEDDSLTIFGVAEKDQGSYTCVASTELDQDLAKA 599

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 600 YLTVMGRPDRPRDLELTDLAE-RSVRLTWIP 629



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 152/653 (23%), Positives = 256/653 (39%), Gaps = 66/653 (10%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVILQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAA-----PYFTVEPEFINAAEE----ETVTFECKASGLPEPEIHWVHNG 163
              +++ +          P F + P+  ++++       +  EC ASG+P P+I W   G
Sbjct: 220 KNPFTLKVLTTRGVAERTPSF-MYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKG 278

Query: 164 KPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
             +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP   
Sbjct: 279 GDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYWL 334

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDV 277
           + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D 
Sbjct: 335 DEPKNLVLAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRDT 392

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
             +    Y C   N+ G    +  ++V +       P +  +        R +     S 
Sbjct: 393 QISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSP 452

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
             ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L 
Sbjct: 453 IPTLRWFKNGQGSNLDGGNYHVHENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRLE 511

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIV 457
           V+ P       T I  +   +       V  +    H    K+     KD E      I 
Sbjct: 512 VKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDEEPL---YIS 561

Query: 458 NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII------SFVTPEGVPGTVQSLE 511
           N+ +     +  F  A K+        G+Y    S  +      +++T  G P   + LE
Sbjct: 562 NRMKKEDDSLTIFGVAEKD-------QGSYTCVASTELDQDLAKAYLTVMGRPDRPRDLE 614

Query: 512 AIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAG 571
              L   +  L W+  +  N  +  Y ++++  +  + G   +   +   P   ++ +  
Sbjct: 615 LTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQ-FQPGVWHDHSKF---PGNVNSAVLQ 670

Query: 572 LEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAM 625
           L P   Y+  +    + G    S      +     P  NP +V+G G+  NN+ I+WT M
Sbjct: 671 LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPM 730

Query: 626 PEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
                  P+ +Y + WRR  T +AWN   V  W  S  V+   P + PYEI+V
Sbjct: 731 NATSAFGPNLRYIVKWRRRETRDAWNNATV--W-GSRYVVGQTPVYVPYEIRV 780



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 100/225 (44%), Gaps = 17/225 (7%)

Query: 379 YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           Y  R Q E DF +A    TV        P  AP++   ++V+++    + WN V   +++
Sbjct: 776 YEIRVQAENDFGKAPEPETVIGYSGEDYPRAAPTDVK-VRVMNSTAISLQWNRVYSDTVQ 834

Query: 433 GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
           G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 835 GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVSQLFPYSNYKLEMVVVNGRG 894

Query: 488 NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
           +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY +KY    GT
Sbjct: 895 DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILVGYTLKYLPFNGT 954

Query: 548 KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 955 KLGKQIVENF----SPNQTKFTVQRADPVSRYRFTLSARTQVGSG 995



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 120/296 (40%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T 
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVILQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 230

Query: 310 --ITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             + ++   +    G S++            C A   P+    I W +     D  S+  
Sbjct: 231 RGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 286

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 287 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLVL 342



 Score = 45.8 bits (107), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 35/209 (16%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSND----YSLTVTKSS 372
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++    +S  + +  
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVILQDM 201

Query: 373 ELDSGQYTCRAQTELDF-IEAQATLTVQV 400
           + D   Y+C A+      I+ +   T++V
Sbjct: 202 QTD---YSCNARFHFTHTIQQKNPFTLKV 227


>gi|19924211|ref|NP_446361.1| neurofascin isoform 3 precursor [Rattus norvegicus]
 gi|16903210|gb|AAL27854.1| neurofascin 155 kDa isoform [Rattus norvegicus]
          Length = 1174

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 200/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 263 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 321

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 322 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 380

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 381 WLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 440

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 441 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 499

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 500 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 559

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 560 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKA 616

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 617 YLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 646



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 154/671 (22%), Positives = 256/671 (38%), Gaps = 85/671 (12%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 220 KNPFTLKV-LTNNPYNDSSLRNHPDIYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLE 278

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 279 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 335

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N   L      
Sbjct: 336 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWLVNGDPLQSAPPN 394

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 395 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 452

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 453 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 511

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 512 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKL 564

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII---- 495
             +W + D    I   +  + +S T            F       G+Y    S  +    
Sbjct: 565 TVSWLKDDEPLYIGNRMKKEDDSLTI-----------FGVAERDQGSYTCMASTELDQDL 613

Query: 496 --SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
             +++T  G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   
Sbjct: 614 AKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWH 672

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDN 607
           +   +   P + ++ +  L P   Y+  +    + G    S      +     P  NP +
Sbjct: 673 DHSKF---PGSVNSAVLHLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSD 729

Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667
           V+G G+  NN+ I+WT M       P+ +Y + WRR  T E WN  +V  W  S  V+  
Sbjct: 730 VKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQ 786

Query: 668 QPTFQPYEIKV 678
            P + PYEI+V
Sbjct: 787 TPVYVPYEIRV 797



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP+    I+V+++    + WN V P +++
Sbjct: 793  YEIRVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVK-IRVLNSTAISLQWNRVYPDTVQ 851

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 852  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVGRLFPYSNYKLEMVVVNGRG 911

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY ++Y    GT
Sbjct: 912  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLRYVPFNGT 971

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 972  KLGKQMVENF----SPNQTKFSVQRADPVSRYRFSLSARTQVGSG 1012



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 120/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 230

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 231 NPYNDSSLRNHPDIYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PD 288

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 289 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 346

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 347 APYWLDEPKNLIL 359



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 99/251 (39%), Gaps = 47/251 (18%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
              Y+C A+          T T+Q      + FTL         V++ NP +  SLR H 
Sbjct: 202 QTDYSCNARFHF-------THTIQ----QKNPFTL--------KVLTNNPYNDSSLRNHP 242

Query: 436 RGYKVQTWTEK 446
             Y  +   E+
Sbjct: 243 DIYSARGVAER 253


>gi|297681291|ref|XP_002818391.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Pongo abelii]
          Length = 1183

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 166/513 (32%), Positives = 243/513 (47%), Gaps = 26/513 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  + P +R    N+ K+L I HV  +D G+Y C
Sbjct: 277 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIIHVSEADSGNYQC 334

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+   P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 335 VAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 393

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 394 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNDYGYLLANAFVNVLAEPPRILTP 453

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 454 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 513

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 514 TGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLILTV 573

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  S+ RF    D+ L V   S+ DSG YTC A T LD + A A L+V   
Sbjct: 574 LWLKDNR--ELPSDERFTVDKDH-LVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDV 630

Query: 402 LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGE 461
              P +  L   +D K   +SW P    +       + ++        G         G 
Sbjct: 631 PNPPFDLELTDQLD-KSVQLSWTPGDDNN--SPITKFIIEYEDAMHEPGLWHHQTEVSGT 687

Query: 462 STTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVT----PEGVPGTVQSLEAIPLG 516
            TT ++ K  P      RV+A N      PSE+   ++T    P+  P  V+ L + P  
Sbjct: 688 QTTAQL-KLSPYVNYSFRVMAVNSIGKSLPSEVSEQYLTKASEPDKNPTAVEGLGSEP-- 744

Query: 517 SSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
                + W KP    + NG  + YK+ ++   G
Sbjct: 745 -DNLVITW-KPLNGFESNGPGLQYKVSWRQKDG 775



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 147/557 (26%), Positives = 232/557 (41%), Gaps = 54/557 (9%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W    K     P N  R V  N    + I ++ ++D+GNY C A
Sbjct: 282 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCVA 336

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QK 257
            N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 337 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 395

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N  G    +  + V         P +
Sbjct: 396 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNDYGYLLANAFVNVLAEPPRILTPAN 455

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + + 
Sbjct: 456 TLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKD 512

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVP--LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            +G YTC A+ +L   + +  L ++ P  +     + ++Q    + ++VS+     +   
Sbjct: 513 STGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQ----RGSMVSF-----ECKV 563

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG--- 489
            H     +     KD     REL  +  E  T + D  V A  +      +    N    
Sbjct: 564 KHDHTLILTVLWLKDN----RELPSD--ERFTVDKDHLVVADVSDDDSGTYTCVANTTLD 617

Query: 490 --PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
               S ++S V    VP     LE       +  L W   +  N  +  + I+Y+     
Sbjct: 618 SVSASAVLSVV---DVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHE 674

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES----KYLFYV--P 601
              P L         T T+A+L  L P   Y   +      G    S    +YL     P
Sbjct: 675 ---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNSIGKSLPSEVSEQYLTKASEP 730

Query: 602 FKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQS 661
            KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W    V+    S
Sbjct: 731 DKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS--VVVANVS 788

Query: 662 ELVLANQPTFQPYEIKV 678
           + +++  PTF PY IKV
Sbjct: 789 KYIVSGTPTFVPYLIKV 805



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 828  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 886

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 887  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 946

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 947  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIP----ANKTRWTLKNL 1002

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1003 NFSTRYKFYFYAQTSAGSGSQ 1023



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 141/605 (23%), Positives = 230/605 (38%), Gaps = 71/605 (11%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 374 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 429

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 430 NDYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 487

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 488 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIVKQ 545

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 546 PEYAVVQRGSMVSFECKVKHDHTLILTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDS 605

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V +   + + P D E+              D S++LS  
Sbjct: 606 GTYTCVANTTLDSVSASAVLSVVD---VPNPPFDLELTDQL----------DKSVQLS-- 650

Query: 343 WLRGSE---PI--------DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           W  G +   PI        D   EP              +++L    Y   +   +    
Sbjct: 651 WTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 710

Query: 392 AQATLTVQV-------PLEAPSNFTLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
              +L  +V         E   N T ++ + ++    V++W P++     G    YKV +
Sbjct: 711 IGKSLPSEVSEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 769

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 770 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAVVMGHSGE 826

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 827 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 886

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 887 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 939

Query: 616 NNLVI 620
           ++L I
Sbjct: 940 SSLKI 944



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 134/344 (38%), Gaps = 57/344 (16%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNG-------K 164
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  ISALEVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKD 86

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDT--GNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           P+    P      G   I I +  K++T  G Y C A N  G    +  V   + +P  T
Sbjct: 87  PLVTMKPG----TGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWT 142

Query: 223 EAPKDEYTVD-GKTVVLTCRVFGAPKPEVN-WIHN--QKELTGGRYTILETGDLKITDVA 278
           +   +  T+  G+++VL CR      P +  W+ N  Q+     R +    GDL  ++V 
Sbjct: 143 KEKLEPITLQSGQSLVLPCRPPIGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVL 202

Query: 279 FADSGE-YTCFAR-NKLGTAQGSGSLTVKE------HTHITDQPEDYEVEAGQSATFR-- 328
             D+ E Y C+AR N   T Q    ++VK       +  I     D E    +S+  R  
Sbjct: 203 PEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFYGAKSSRERPP 262

Query: 329 ------CNAVSDPSLKLSIVWLRG-----SEPIDFESEP-------RFVQSN-DYSLTVT 369
                  NA +   L+ +++ L         PI + ++        R V  N + +L + 
Sbjct: 263 TFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQII 322

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             SE DSG Y C A+  L  I    ++ V+     + AP N  L
Sbjct: 323 HVSEADSGNYQCVAKNALGAIHHTISVRVKAAPYWITAPQNLVL 366


>gi|119611934|gb|EAW91528.1| hCG16415, isoform CRA_e [Homo sapiens]
          Length = 1124

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 200/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 348 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 406

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 407 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 465

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 466 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 525

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 526 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 584

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED     G +    C    D
Sbjct: 585 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHD 644

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 645 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 701

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 702 YLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 731



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 151/655 (23%), Positives = 253/655 (38%), Gaps = 70/655 (10%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 263 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 321

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 322 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 379

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 380 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 435

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 436 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 493

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 494 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 553

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 554 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 612

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIREL 455
            V+ P       T I  +   +       V  +    H    K+  +W + D    I   
Sbjct: 613 EVKDP-------TRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNR 665

Query: 456 IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII------SFVTPEGVPGTVQS 509
           +  + +S T            F       G+Y    S  +      +++T  G P   + 
Sbjct: 666 MKKEDDSLTI-----------FGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRD 714

Query: 510 LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKL 569
           LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   Y   P + ++ +
Sbjct: 715 LELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQ-FQPGVWHDHSKY---PGSVNSAV 770

Query: 570 AGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWT 623
             L P   Y+  +    + G    S      +     P  NP +V+G G+  NN+ I+WT
Sbjct: 771 LRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWT 830

Query: 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            M       P+ +Y + WRR  T EAWN  +V  W  S  V+   P + PYEI+V
Sbjct: 831 PMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQTPVYVPYEIRV 882



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     +V        P  AP+    ++V+++    + WN V   +++
Sbjct: 878  YEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVK-VRVMNSTAISLQWNRVYSDTVQ 936

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 937  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRG 996

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+++GY +KY +  GT
Sbjct: 997  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLKYVAFNGT 1056

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            KVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 1057 KVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 1097



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 117/297 (39%), Gaps = 30/297 (10%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGN 194
            + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G 
Sbjct: 152 RDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGE 211

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNW 252
           Y C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W
Sbjct: 212 YQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFW 271

Query: 253 IHNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK--- 305
           + +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K   
Sbjct: 272 MSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLT 331

Query: 306 -----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
                E T     P+       V  G      C A   P+    I W +     D  S+ 
Sbjct: 332 TRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDK 387

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
              ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 388 AKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 444



 Score = 47.4 bits (111), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 29/206 (14%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 133 LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 192

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------EDYE 318
              + D           GEY CFARNK GTA     L+ +    ++  P       +   
Sbjct: 193 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 247

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 248 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 303

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQV 400
              Y+C A+      I+ +   T++V
Sbjct: 304 QTDYSCNARFHFTHTIQQKNPFTLKV 329


>gi|81158224|ref|NP_005001.3| neuronal cell adhesion molecule isoform B precursor [Homo sapiens]
          Length = 1183

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 165/513 (32%), Positives = 240/513 (46%), Gaps = 26/513 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  + P +R    N+ K+L I HV  +D G+Y C
Sbjct: 277 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIIHVSEADSGNYQC 334

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+   P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 335 IAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 393

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 394 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 453

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 454 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 513

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 514 TGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTV 573

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  S+ RF    D+ L V   S+ DSG YTC A T LD + A A L+V   
Sbjct: 574 LWLKDNR--ELPSDERFTVDKDH-LVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDV 630

Query: 402 LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGE 461
              P +  L   +D K   +SW P    +       + ++        G         G 
Sbjct: 631 PNPPFDLELTDQLD-KSVQLSWTPGDDNN--SPITKFIIEYEDAMHKPGLWHHQTEVSGT 687

Query: 462 STTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPGTVQSLEAIPLG 516
            TT ++ K  P      RV+A N      PSE     +     P+  P  V+ L + P  
Sbjct: 688 QTTAQL-KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEP-- 744

Query: 517 SSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
                + W KP    + NG  + YK+ ++   G
Sbjct: 745 -DNLVITW-KPLNGFESNGPGLQYKVSWRQKDG 775



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 147/557 (26%), Positives = 233/557 (41%), Gaps = 54/557 (9%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W    K     P N  R V  N    + I ++ ++D+GNY C A
Sbjct: 282 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 336

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QK 257
            N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 337 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 395

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N+ G    +  + V         P +
Sbjct: 396 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPAN 455

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + + 
Sbjct: 456 TLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKD 512

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVP--LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            +G YTC A+ +L   + +  L ++ P  +     + ++Q    + ++VS+     +   
Sbjct: 513 STGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQ----RGSMVSF-----ECKV 563

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG--- 489
            H     +     KD     REL  +  E  T + D  V A  +      +    N    
Sbjct: 564 KHDHTLSLTVLWLKDN----RELPSD--ERFTVDKDHLVVADVSDDDSGTYTCVANTTLD 617

Query: 490 --PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
               S ++S V    VP     LE       +  L W   +  N  +  + I+Y+     
Sbjct: 618 SVSASAVLSVV---DVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHK 674

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV--P 601
              P L         T T+A+L  L P   Y   +      G      A  +YL     P
Sbjct: 675 ---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEP 730

Query: 602 FKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQS 661
            KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W    V+    S
Sbjct: 731 DKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS--VVVANVS 788

Query: 662 ELVLANQPTFQPYEIKV 678
           + +++  PTF PY IKV
Sbjct: 789 KYIVSGTPTFVPYLIKV 805



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 828  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 886

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 887  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 946

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 947  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIP----ANKTRWTLKNL 1002

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1003 NFSTRYKFYFYAQTSAGSGSQ 1023



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 141/605 (23%), Positives = 231/605 (38%), Gaps = 71/605 (11%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 374 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 429

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 430 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 487

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 488 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIVKQ 545

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 546 PEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDS 605

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V +   + + P D E+              D S++LS  
Sbjct: 606 GTYTCVANTTLDSVSASAVLSVVD---VPNPPFDLELTDQL----------DKSVQLS-- 650

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 651 WTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 710

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 711 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 769

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 770 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDMGFAPEPAVVMGHSGE 826

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 827 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 886

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 887 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 939

Query: 616 NNLVI 620
           ++L I
Sbjct: 940 SSLKI 944



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 134/344 (38%), Gaps = 57/344 (16%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNG-------K 164
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  ISALEVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKD 86

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDT--GNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           P+    P      G   I I +  K++T  G Y C A N  G    +  V   + +P  T
Sbjct: 87  PLVTMKPG----TGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWT 142

Query: 223 EAPKDEYTVD-GKTVVLTCRVFGAPKPEVN-WIHN--QKELTGGRYTILETGDLKITDVA 278
           +   +  T+  G+++VL CR      P +  W+ N  Q+     R +    GDL  ++V 
Sbjct: 143 KEKLEPITLQSGQSLVLPCRPPIGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVL 202

Query: 279 FADSGE-YTCFAR-NKLGTAQGSGSLTVKE------HTHITDQPEDYEVEAGQSATFR-- 328
             D+ E Y C+AR N   T Q    ++VK       +  I     D E    +S+  R  
Sbjct: 203 PEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFYGAKSSRERPP 262

Query: 329 ------CNAVSDPSLKLSIVWLRG-----SEPIDFESEP-------RFVQSN-DYSLTVT 369
                  NA +   L+ +++ L         PI + ++        R V  N + +L + 
Sbjct: 263 TFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQII 322

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             SE DSG Y C A+  L  I    ++ V+     + AP N  L
Sbjct: 323 HVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLVL 366


>gi|31874098|emb|CAD97960.1| hypothetical protein [Homo sapiens]
          Length = 1183

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 165/513 (32%), Positives = 240/513 (46%), Gaps = 26/513 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  + P +R    N+ K+L I HV  +D G+Y C
Sbjct: 277 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIIHVSEADSGNYQC 334

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+   P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 335 IAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 393

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 394 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 453

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 454 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 513

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 514 TGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTV 573

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  S+ RF    D+ L V   S+ DSG YTC A T LD + A A L+V   
Sbjct: 574 LWLKDNR--ELPSDERFTVDKDH-LVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDV 630

Query: 402 LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGE 461
              P +  L   +D K   +SW P    +       + ++        G         G 
Sbjct: 631 PNPPFDLELTDQLD-KSVQLSWTPGDDNN--SPITKFIIEYEDAMHKPGLWHHQTEVSGT 687

Query: 462 STTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPGTVQSLEAIPLG 516
            TT ++ K  P      RV+A N      PSE     +     P+  P  V+ L + P  
Sbjct: 688 QTTAQL-KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEP-- 744

Query: 517 SSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
                + W KP    + NG  + YK+ ++   G
Sbjct: 745 -DNLVITW-KPLNGFESNGPGLQYKVSWRQKDG 775



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 147/557 (26%), Positives = 233/557 (41%), Gaps = 54/557 (9%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W    K     P N  R V  N    + I ++ ++D+GNY C A
Sbjct: 282 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 336

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QK 257
            N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 337 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 395

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N+ G    +  + V         P +
Sbjct: 396 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPAN 455

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + + 
Sbjct: 456 TLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKD 512

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVP--LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            +G YTC A+ +L   + +  L ++ P  +     + ++Q    + ++VS+     +   
Sbjct: 513 STGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQ----RGSMVSF-----ECKV 563

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG--- 489
            H     +     KD     REL  +  E  T + D  V A  +      +    N    
Sbjct: 564 KHDHTLSLTVLWLKDN----RELPSD--ERFTVDKDHLVVADVSDDDSGTYTCVANTTLD 617

Query: 490 --PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
               S ++S V    VP     LE       +  L W   +  N  +  + I+Y+     
Sbjct: 618 SVSASAVLSVV---DVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHK 674

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV--P 601
              P L         T T+A+L  L P   Y   +      G      A  +YL     P
Sbjct: 675 ---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEP 730

Query: 602 FKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQS 661
            KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W    V+    S
Sbjct: 731 DKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS--VVVANVS 788

Query: 662 ELVLANQPTFQPYEIKV 678
           + +++  PTF PY IKV
Sbjct: 789 KYIVSGTPTFVPYLIKV 805



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 828  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 886

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 887  ILTFQGSKTHGMLPGLEPLSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 946

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERLPYISDPTT-TSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++    +  PT  T   L  L
Sbjct: 947  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVD----LKIPTNKTRWTLKNL 1002

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1003 NFSTRYKFYFYAQTSAGSGSQ 1023



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 141/605 (23%), Positives = 231/605 (38%), Gaps = 71/605 (11%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 374 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 429

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 430 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 487

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 488 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIVKQ 545

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 546 PEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDS 605

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V +   + + P D E+              D S++LS  
Sbjct: 606 GTYTCVANTTLDSVSASAVLSVVD---VPNPPFDLELTDQL----------DKSVQLS-- 650

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 651 WTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 710

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 711 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 769

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 770 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDMGFAPEPAVVMGHSGE 826

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 827 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 886

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 887 ILTFQGSKTHGMLPGLEPLSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 939

Query: 616 NNLVI 620
           ++L I
Sbjct: 940 SSLKI 944



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 134/344 (38%), Gaps = 57/344 (16%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNG-------K 164
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  ISALEVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKD 86

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDT--GNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           P+    P      G   I I +  K++T  G Y C A N  G    +  V   + +P  T
Sbjct: 87  PLVTMKPG----TGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWT 142

Query: 223 EAPKDEYTVD-GKTVVLTCRVFGAPKPEVN-WIHN--QKELTGGRYTILETGDLKITDVA 278
           +   +  T+  G+++VL CR      P +  W+ N  Q+     R +    GDL  ++V 
Sbjct: 143 KEKLEPITLQSGQSLVLPCRPPIGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVL 202

Query: 279 FADSGE-YTCFAR-NKLGTAQGSGSLTVKE------HTHITDQPEDYEVEAGQSATFR-- 328
             D+ E Y C+AR N   T Q    ++VK       +  I     D E    +S+  R  
Sbjct: 203 PEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFYGAKSSRERPP 262

Query: 329 ------CNAVSDPSLKLSIVWLRG-----SEPIDFESEP-------RFVQSN-DYSLTVT 369
                  NA +   L+ +++ L         PI + ++        R V  N + +L + 
Sbjct: 263 TFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQII 322

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             SE DSG Y C A+  L  I    ++ V+     + AP N  L
Sbjct: 323 HVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLVL 366


>gi|54633206|dbj|BAD66839.1| KIAA0756 splice variant 1 [Homo sapiens]
          Length = 836

 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 200/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 60  TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 118

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 119 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 177

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 178 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 237

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 238 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 296

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED     G +    C    D
Sbjct: 297 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHD 356

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 357 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 413

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 414 YLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 443



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 133/555 (23%), Positives = 221/555 (39%), Gaps = 51/555 (9%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATN 201
           +  EC ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N
Sbjct: 72  LLLECIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASN 128

Query: 202 SLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG 261
            +G +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L  
Sbjct: 129 KMGSIRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQS 187

Query: 262 G-----RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
                 R    +T  +   D   +    Y C   N+ G    +  ++V +       P +
Sbjct: 188 APPNPNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRN 245

Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
             +        R +     S   ++ W +  +  + +     V  N  SL +    + D 
Sbjct: 246 QLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQ 304

Query: 377 GQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR 436
           G YTC A   L   E Q  L V+ P       T I  +   +       V  +    H  
Sbjct: 305 GIYTCVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVARRGTTVQLECRVKHDP 357

Query: 437 GYKVQ-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
             K+  +W + D    I   +  + +S T     F  A ++        G+Y    S  +
Sbjct: 358 SLKLTVSWLKDDEPLYIGNRMKKEDDSLTI----FGVAERD-------QGSYTCVASTEL 406

Query: 496 ------SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
                 +++T  G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + 
Sbjct: 407 DQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQ-FQP 465

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFK 603
           G   +   Y   P + ++ +  L P   Y+  +    + G    S      +     P  
Sbjct: 466 GVWHDHSKY---PGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPES 522

Query: 604 NPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSEL 663
           NP +V+G G+  NN+ I+WT M       P+ +Y + WRR  T EAWN  +V  W  S  
Sbjct: 523 NPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRY 579

Query: 664 VLANQPTFQPYEIKV 678
           V+   P + PYEI+V
Sbjct: 580 VVGQTPVYVPYEIRV 594



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379 YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           Y  R Q E DF +     +V        P  AP+    ++V+++    + WN V   +++
Sbjct: 590 YEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVK-VRVMNSTAISLQWNRVYSDTVQ 648

Query: 433 GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
           G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 649 GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRG 708

Query: 488 NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
           +GP SE   F TPEGVP   +             L+W  PE PNG+++GY +KY +  GT
Sbjct: 709 DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLKYVAFNGT 768

Query: 548 KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           KVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 769 KVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 809


>gi|410254538|gb|JAA15236.1| neuronal cell adhesion molecule [Pan troglodytes]
          Length = 1183

 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 139/384 (36%), Positives = 197/384 (51%), Gaps = 11/384 (2%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  + P +R    N+ K+L I HV  +D G+Y C
Sbjct: 277 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIIHVSEADSGNYQC 334

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+   P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 335 IAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 393

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 394 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 453

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 454 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 513

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 514 TGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTV 573

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  S+ RF    D+ L V   S+ DSG YTC A T LD + A A L+V   
Sbjct: 574 LWLKDNR--ELPSDERFTVDKDH-LVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDV 630

Query: 402 LEAPSNFTLIQVIDAKKAVVSWNP 425
              P +  L   +D K   +SW P
Sbjct: 631 PNPPFDLELTDQLD-KSVQLSWTP 653



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 147/557 (26%), Positives = 233/557 (41%), Gaps = 54/557 (9%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W    K     P N  R V  N    + I ++ ++D+GNY C A
Sbjct: 282 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 336

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QK 257
            N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 337 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 395

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N+ G    +  + V         P +
Sbjct: 396 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPAN 455

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + + 
Sbjct: 456 TLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKD 512

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVP--LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            +G YTC A+ +L   + +  L ++ P  +     + ++Q    + ++VS+     +   
Sbjct: 513 STGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQ----RGSMVSF-----ECKV 563

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG--- 489
            H     +     KD     REL  +  E  T + D  V A  +      +    N    
Sbjct: 564 KHDHTLSLTVLWLKDN----RELPSD--ERFTVDKDHLVVADVSDDDSGTYTCVANTTLD 617

Query: 490 --PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
               S ++S V    VP     LE       +  L W   +  N  +  + I+Y+     
Sbjct: 618 SVSASAVLSVV---DVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHE 674

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV--P 601
              P L         T T+A+L  L P   Y   +      G      A  +YL     P
Sbjct: 675 ---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEP 730

Query: 602 FKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQS 661
            KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W    V+    S
Sbjct: 731 DKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS--VVVANVS 788

Query: 662 ELVLANQPTFQPYEIKV 678
           + +++  PTF PY IKV
Sbjct: 789 KYIVSGTPTFVPYLIKV 805



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 828  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 886

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 887  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 946

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 947  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIP----ANKTRWTLKNL 1002

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1003 NFSTRYKFYFYAQTSAGSGSQ 1023



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 141/605 (23%), Positives = 231/605 (38%), Gaps = 71/605 (11%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 374 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 429

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 430 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 487

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 488 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIVKQ 545

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 546 PEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDS 605

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V +   + + P D E+              D S++LS  
Sbjct: 606 GTYTCVANTTLDSVSASAVLSVVD---VPNPPFDLELTDQL----------DKSVQLS-- 650

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 651 WTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 710

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 711 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 769

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 770 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDMGFAPEPAVVMGHSGE 826

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 827 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 886

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 887 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 939

Query: 616 NNLVI 620
           ++L I
Sbjct: 940 SSLKI 944



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 134/344 (38%), Gaps = 57/344 (16%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNG-------K 164
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  ISALEVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKD 86

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDT--GNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           P+    P      G   I I +  K++T  G Y C A N  G    +  V   + +P  T
Sbjct: 87  PLVTMKPG----TGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWT 142

Query: 223 EAPKDEYTVD-GKTVVLTCRVFGAPKPEVN-WIHN--QKELTGGRYTILETGDLKITDVA 278
           +   +  T+  G+++VL CR      P +  W+ N  Q+     R +    GDL  ++V 
Sbjct: 143 KEKLEPITLQSGQSLVLPCRPPIGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVL 202

Query: 279 FADSGE-YTCFAR-NKLGTAQGSGSLTVKE------HTHITDQPEDYEVEAGQSATFR-- 328
             D+ E Y C+AR N   T Q    ++VK       +  I     D E    +S+  R  
Sbjct: 203 PEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFYGAKSSRERPP 262

Query: 329 ------CNAVSDPSLKLSIVWLRG-----SEPIDFESEP-------RFVQSN-DYSLTVT 369
                  NA +   L+ +++ L         PI + ++        R V  N + +L + 
Sbjct: 263 TFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQII 322

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             SE DSG Y C A+  L  I    ++ V+     + AP N  L
Sbjct: 323 HVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLVL 366


>gi|149058632|gb|EDM09789.1| neurofascin, isoform CRA_e [Rattus norvegicus]
          Length = 1174

 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 200/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 263 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 321

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 322 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 380

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 381 WLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 440

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 441 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 499

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 500 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 559

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 560 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKA 616

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 617 YLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 646



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 154/671 (22%), Positives = 256/671 (38%), Gaps = 85/671 (12%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 220 KNPFTLKV-LTNNPYNDSSLRNHPDIYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLE 278

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 279 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 335

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N   L      
Sbjct: 336 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWLVNGDPLQSAPPN 394

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 395 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 452

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 453 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 511

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 512 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKL 564

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII---- 495
             +W + D    I   +  + +S T            F       G+Y    S  +    
Sbjct: 565 TVSWLKDDEPLYIGNRMKKEDDSLTI-----------FGVAERDQGSYTCMASTELDQDL 613

Query: 496 --SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
             +++T  G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   
Sbjct: 614 AKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWH 672

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDN 607
           +   +   P + ++ +  L P   Y+  +    + G    S      +     P  NP +
Sbjct: 673 DHSKF---PGSVNSAVLHLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSD 729

Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667
           V+G G+  NN+ I+WT M       P+ +Y + WRR  T E WN  +V  W  S  V+  
Sbjct: 730 VKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQ 786

Query: 668 QPTFQPYEIKV 678
            P + PYEI+V
Sbjct: 787 TPVYVPYEIRV 797



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP+    I+V+++    + WN V   +++
Sbjct: 793  YEIRVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVK-IRVLNSTAISLQWNRVYSDTVQ 851

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 852  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVGRLFPYSNYKLEMVVVNGRG 911

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY ++Y    GT
Sbjct: 912  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLRYVPFNGT 971

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 972  KLGKQMVENF----SPNQTKFSVQRADPVSRYRFSLSARTQVGSG 1012



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 120/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 230

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 231 NPYNDSSLRNHPDIYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PD 288

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 289 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 346

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 347 APYWLDEPKNLIL 359



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 99/251 (39%), Gaps = 47/251 (18%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
              Y+C A+          T T+Q      + FTL         V++ NP +  SLR H 
Sbjct: 202 QTDYSCNARFHF-------THTIQ----QKNPFTL--------KVLTNNPYNDSSLRNHP 242

Query: 436 RGYKVQTWTEK 446
             Y  +   E+
Sbjct: 243 DIYSARGVAER 253


>gi|332811716|ref|XP_003308756.1| PREDICTED: neurofascin isoform 2 [Pan troglodytes]
          Length = 1276

 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 201/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 365 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 423

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 424 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 482

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 483 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 542

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 543 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 601

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 602 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 661

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 662 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 718

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 719 YLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 748



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 156/671 (23%), Positives = 258/671 (38%), Gaps = 85/671 (12%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 263 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 321

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 322 KNPFTLKV-LTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLE 380

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 381 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 437

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 438 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 496

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 497 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 554

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 555 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 613

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 614 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKL 666

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII---- 495
             +W + D    I   +  + +S T            F       G+Y    S  +    
Sbjct: 667 TVSWLKDDEPLYIGNRMKKEDDSLTI-----------FGVAERDQGSYTCVASTELDQDL 715

Query: 496 --SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
             +++T  G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   
Sbjct: 716 AKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQ-FQPGVWH 774

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDN 607
           +   Y   P + ++ +  L P   Y+  +    + G    S      +     P  NP +
Sbjct: 775 DHSKY---PGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGD 831

Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667
           V+G G+  NN+ I+WT M       P+ +Y + WRR  T EAWN  +V  W  S  V+  
Sbjct: 832 VKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQ 888

Query: 668 QPTFQPYEIKV 678
            P + PYEI+V
Sbjct: 889 TPVYVPYEIRV 899



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     +V        P  AP+    ++V+++    + WN V   +++
Sbjct: 895  YEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVK-VRVMNSTAISLQWNRVYSDTVQ 953

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 954  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGMVSRLFPYSNYKLEMVVVNGRG 1013

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+++GY +KY +  GT
Sbjct: 1014 DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLKYVAFNGT 1073

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            KVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 1074 KVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 1114



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 120/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 153 DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 212

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 213 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 272

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 273 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 332

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 333 HPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PD 390

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 391 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 448

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 449 APYWLDEPKNLIL 461



 Score = 47.8 bits (112), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 29/213 (13%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 133 LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 192

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 193 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 247

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 248 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 303

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQVPLEAPSN 407
              Y+C A+      I+ +   T++V    P N
Sbjct: 304 QTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN 336


>gi|119611932|gb|EAW91526.1| hCG16415, isoform CRA_c [Homo sapiens]
          Length = 1127

 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 200/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 351 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 409

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 410 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 468

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 469 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 528

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 529 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 587

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED     G +    C    D
Sbjct: 588 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHD 647

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 648 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 704

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 705 YLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 734



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 151/655 (23%), Positives = 253/655 (38%), Gaps = 70/655 (10%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 266 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 324

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 325 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 382

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 383 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 438

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 439 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 496

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 497 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 556

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 557 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 615

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIREL 455
            V+ P       T I  +   +       V  +    H    K+  +W + D    I   
Sbjct: 616 EVKDP-------TRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNR 668

Query: 456 IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII------SFVTPEGVPGTVQS 509
           +  + +S T            F       G+Y    S  +      +++T  G P   + 
Sbjct: 669 MKKEDDSLTI-----------FGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRD 717

Query: 510 LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKL 569
           LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   Y   P + ++ +
Sbjct: 718 LELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQ-FQPGVWHDHSKY---PGSVNSAV 773

Query: 570 AGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWT 623
             L P   Y+  +    + G    S      +     P  NP +V+G G+  NN+ I+WT
Sbjct: 774 LRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWT 833

Query: 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            M       P+ +Y + WRR  T EAWN  +V  W  S  V+   P + PYEI+V
Sbjct: 834 PMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQTPVYVPYEIRV 885



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     +V        P  AP+    ++V+++    + WN V   +++
Sbjct: 881  YEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVK-VRVMNSTAISLQWNRVYSDTVQ 939

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 940  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRG 999

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+++GY +KY +  GT
Sbjct: 1000 DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLKYVAFNGT 1059

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            KVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 1060 KVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 1100



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 117/297 (39%), Gaps = 30/297 (10%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGN 194
            + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G 
Sbjct: 155 RDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGE 214

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNW 252
           Y C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W
Sbjct: 215 YQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFW 274

Query: 253 IHNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK--- 305
           + +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K   
Sbjct: 275 MSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLT 334

Query: 306 -----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
                E T     P+       V  G      C A   P+    I W +     D  S+ 
Sbjct: 335 TRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDK 390

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
              ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 391 AKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 447



 Score = 47.0 bits (110), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 29/206 (14%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 136 LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 195

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------EDYE 318
              + D           GEY CFARNK GTA     L+ +    ++  P       +   
Sbjct: 196 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 250

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 251 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 306

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQV 400
              Y+C A+      I+ +   T++V
Sbjct: 307 QTDYSCNARFHFTHTIQQKNPFTLKV 332


>gi|431892899|gb|ELK03327.1| Neurofascin [Pteropus alecto]
          Length = 1270

 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I ++   D
Sbjct: 236 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNISEED 294

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 295 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPQNLILAPGEDGRLVCRANGNPKPTVQ 353

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 354 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 413

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 414 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 472

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 473 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVTKRGTTVQLECRVKHD 532

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   S    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 533 PSLKLTVSWLKDDEPLYIGSR---MKKEDDSLTIFGVAERDQGSYTCIASTELDQDLAKA 589

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 590 HLTVLADQTTPTN 602



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 177/760 (23%), Positives = 292/760 (38%), Gaps = 111/760 (14%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 151 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMVQDMQTDYSCNARFHFTHTIQQ 209

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 210 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 267

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 268 GGDL---PSDKAKFENFNKALRITNISEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 323

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + P++     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 324 LDEPQNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 381

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 382 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 441

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 442 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 500

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIREL 455
            V+ P       T I  +   +       V  +    H    K+  +W + D    I   
Sbjct: 501 EVKDP-------TRIYRMPEDQVTKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGSR 553

Query: 456 IVNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
           +  + +S T                 TE+D+ +  +K    VLA       P + + +  
Sbjct: 554 MKKEDDSLTIFGVAERDQGSYTCIASTELDQDL--AKAHLTVLA---DQTTPTNRLAAL- 607

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
            P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   +
Sbjct: 608 -PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKF 665

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRG 612
              P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G
Sbjct: 666 ---PGSVNSAVLQLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEG 722

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
           +  NN+ I+WT M       P+ +Y + WRR  T E WN  +V  W  S  V+   P + 
Sbjct: 723 TRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQTPVYV 779

Query: 673 PYEIKVVQTWTEKD-GEGSIRELIVN-KGE----STTTEVDKFV-------------PAS 713
           PYEI+V     E D G+G   + ++   GE    +  T+V   V             PAS
Sbjct: 780 PYEIRV---QAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAISLQRGSKPAS 836

Query: 714 KNFARV------------LAFNGAYNGPPSEIISFVTPEG 741
              A V            +  NG  +GP SE   F TPEG
Sbjct: 837 LATASVVVSRFFNYKLEMVVVNGRGDGPRSETKEFTTPEG 876



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 480 VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKI 539
           ++  NG  +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY +
Sbjct: 854 MVVVNGRGDGPRSETKEFTTPEGVPSAPRRFRVRQPNLEIINLEWDHPEHPNGILIGYSL 913

Query: 540 KYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           +Y +  GTKVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 914 RYVAFNGTKVGKQIVENF----SPNQTKFTVQRADPVSRYRFTLSARTQVGSG 962



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 115/296 (38%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPP---NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +  + A     + RR+ G   I   +  + +   G Y
Sbjct: 41  DNILIECEAQGNPAPSFHWTRNSRFFNVAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 100

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 101 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 160

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK---- 305
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K    
Sbjct: 161 SSSMEPITQDKRVSQGHNGDLYFSNVMVQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 220

Query: 306 ----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
               E T     P+       V  G      C A   P+    I W +     D  S+  
Sbjct: 221 RGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 276

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 277 KFENFNKALRITNISEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPQNLIL 332



 Score = 46.6 bits (109), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 83/206 (40%), Gaps = 29/206 (14%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L+  P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 21  LSQPPTITKQSVKDHIVDPRDNILIECEAQGNPAPSFHWTRNSRFFNVAKDPRVSMRRRS 80

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------EDYE 318
              + D           GEY CFARNK GTA     L+ +    ++  P       +   
Sbjct: 81  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 135

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 136 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMVQDM 191

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQV 400
              Y+C A+      I+ +   T++V
Sbjct: 192 QTDYSCNARFHFTHTIQQKNPFTLKV 217


>gi|426333440|ref|XP_004028285.1| PREDICTED: neurofascin isoform 2 [Gorilla gorilla gorilla]
          Length = 1271

 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 201/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 365 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 423

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 424 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 482

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 483 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 542

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 543 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 601

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 602 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 661

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 662 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 718

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 719 YLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 748



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 156/671 (23%), Positives = 258/671 (38%), Gaps = 85/671 (12%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 263 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 321

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 322 KNPFTLKV-LTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLE 380

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 381 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 437

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 438 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 496

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 497 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 554

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 555 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 613

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 614 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKL 666

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII---- 495
             +W + D    I   +  + +S T            F       G+Y    S  +    
Sbjct: 667 TVSWLKDDEPLYIGNRMKKEDDSLTI-----------FGVAERDQGSYTCVASTELDQDL 715

Query: 496 --SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
             +++T  G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   
Sbjct: 716 AKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQ-FQPGVWH 774

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDN 607
           +   Y   P + ++ +  L P   Y+  +    + G    S      +     P  NP +
Sbjct: 775 DHSKY---PGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGD 831

Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667
           V+G G+  NN+ I+WT M       P+ +Y + WRR  T EAWN  +V  W  S  V+  
Sbjct: 832 VKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQ 888

Query: 668 QPTFQPYEIKV 678
            P + PYEI+V
Sbjct: 889 TPVYVPYEIRV 899



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     +V        P  AP+    ++V+++    + WN V   +++
Sbjct: 895  YEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVK-VRVMNSTAISLQWNRVYSDTVQ 953

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 954  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRG 1013

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+++GY +KY +  GT
Sbjct: 1014 DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLKYVAFNGT 1073

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            KVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 1074 KVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 1114



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 120/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 153 DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 212

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 213 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 272

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 273 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 332

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 333 HPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PD 390

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 391 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 448

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 449 APYWLDEPKNLIL 461



 Score = 47.8 bits (112), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 29/213 (13%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 133 LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 192

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 193 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 247

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 248 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 303

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQVPLEAPSN 407
              Y+C A+      I+ +   T++V    P N
Sbjct: 304 QTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN 336


>gi|380792623|gb|AFE68187.1| neurofascin isoform 3 precursor, partial [Macaca mulatta]
          Length = 1086

 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 201/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 263 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 321

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 322 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 380

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 381 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 440

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 441 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 499

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 500 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 559

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 560 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 616

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 617 YLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 646



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 157/669 (23%), Positives = 257/669 (38%), Gaps = 81/669 (12%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 220 KNPFTLKV-LTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLE 278

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 279 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 335

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 336 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 394

Query: 266 ILE--TGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAG 322
                 GD  I  D   +    Y C   N+ G    +  ++V +       P +  +   
Sbjct: 395 PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVI 454

Query: 323 QSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCR 382
                R +     S   ++ W +  +  + +     V  N  SL +    + D G YTC 
Sbjct: 455 LYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCV 513

Query: 383 AQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ- 441
           A   L   E Q  L V+ P       T I  +   +       V  +    H    K+  
Sbjct: 514 ATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTV 566

Query: 442 TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII------ 495
           +W + D    I   +  + +S T            F       G+Y    S  +      
Sbjct: 567 SWLKDDEPLYIGNRMKKEDDSLTI-----------FGVAERDQGSYTCVASTELDQDLAK 615

Query: 496 SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
           +++T  G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   + 
Sbjct: 616 AYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDH 674

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVE 609
             Y   P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+
Sbjct: 675 SKY---PGSVNSAVLRLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPGDVK 731

Query: 610 GRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQP 669
           G G+  NN+ I+WT M       P+ +Y + WRR  T EAWN  +V  W  S  V+   P
Sbjct: 732 GEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQTP 788

Query: 670 TFQPYEIKV 678
            + PYEI+V
Sbjct: 789 VYVPYEIRV 797



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     +V        P  AP+    ++V+++    + WN V P +++
Sbjct: 793  YEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVK-VRVMNSTAISLQWNRVYPDTVQ 851

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 852  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRG 911

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG++ GY +KY +  GT
Sbjct: 912  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMTGYTLKYVAFNGT 971

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            KVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 972  KVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 1012



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 120/314 (38%), Gaps = 47/314 (14%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGN 194
            + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G 
Sbjct: 50  RDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGE 109

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNW 252
           Y C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W
Sbjct: 110 YQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFW 169

Query: 253 IHNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHT 308
           + +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T
Sbjct: 170 MSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLT 229

Query: 309 H-------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKL 339
           +       + + P+ Y                       V  G      C A   P+   
Sbjct: 230 NHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--P 287

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+
Sbjct: 288 DIAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVK 345

Query: 400 VP---LEAPSNFTL 410
                L+ P N  L
Sbjct: 346 AAPYWLDEPKNLIL 359



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 84/213 (39%), Gaps = 29/213 (13%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------EDYE 318
              + D           GEY CFARNK GTA     L+ +    ++  P       +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQVPLEAPSN 407
              Y+C A+      I+ +   T++V    P N
Sbjct: 202 QTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN 234


>gi|149058633|gb|EDM09790.1| neurofascin, isoform CRA_f [Rattus norvegicus]
          Length = 1336

 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 192/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 246 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 304

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 305 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 363

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 364 WLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 423

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 424 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 482

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 483 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 542

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 543 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKA 599

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 600 YLTVLADQATPTN 612



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 154/665 (23%), Positives = 263/665 (39%), Gaps = 75/665 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAA-----PYFTVEPEFINAAEE----ETVTFECKASGLPEPEIHWVHNG 163
              +++ +          P F + P+  ++++       +  EC ASG+P P+I W   G
Sbjct: 220 KNPFTLKVLTTRGVAERTPSF-MYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKG 278

Query: 164 KPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
             +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP   
Sbjct: 279 GDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYWL 334

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDV 277
           + PK+     G+   L CR  G PKP V W+ N   L        R    +T  +   D 
Sbjct: 335 DEPKNLILAPGEDGRLVCRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDT--IIFRDT 392

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
             +    Y C   N+ G    +  ++V +       P +  +        R +     S 
Sbjct: 393 QISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSP 452

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
             ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L 
Sbjct: 453 IPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRLE 511

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIRELI 456
           V+ P       T I  +   +       V  +    H    K+  +W + D    I   +
Sbjct: 512 VKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRM 564

Query: 457 VNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
             + +S T                 TE+D+ +  +K +  VLA       P + + +   
Sbjct: 565 KKEDDSLTIFGVAERDQGSYTCMASTELDQDL--AKAYLTVLADQAT---PTNRLAAL-- 617

Query: 500 PEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
           P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   + 
Sbjct: 618 PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKF- 675

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGS 613
             P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G+
Sbjct: 676 --PGSVNSAVLHLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGT 733

Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
             NN+ I+WT M       P+ +Y + WRR  T E WN  +V  W  S  V+   P + P
Sbjct: 734 RKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQTPVYVP 790

Query: 674 YEIKV 678
           YEI+V
Sbjct: 791 YEIRV 795



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP+    I+V+++    + WN V   +++
Sbjct: 791  YEIRVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVK-IRVLNSTAISLQWNRVYSDTVQ 849

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 850  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVGRLFPYSNYKLEMVVVNGRG 909

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY ++Y    GT
Sbjct: 910  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLRYVPFNGT 969

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 970  KLGKQMVENF----SPNQTKFSVQRADPVSRYRFSLSARTQVGSG 1010



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 120/296 (40%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T 
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 230

Query: 310 --ITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             + ++   +    G S++            C A   P+    I W +     D  S+  
Sbjct: 231 RGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 286

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 287 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 342



 Score = 46.2 bits (108), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 29/206 (14%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQV 400
              Y+C A+      I+ +   T++V
Sbjct: 202 QTDYSCNARFHFTHTIQQKNPFTLKV 227


>gi|332811714|ref|XP_514129.3| PREDICTED: neurofascin isoform 3 [Pan troglodytes]
          Length = 1271

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 201/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 365 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 423

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 424 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 482

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 483 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 542

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 543 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 601

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 602 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 661

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 662 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 718

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 719 YLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 748



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 156/671 (23%), Positives = 258/671 (38%), Gaps = 85/671 (12%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 263 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 321

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 322 KNPFTLKV-LTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLE 380

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 381 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 437

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 438 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 496

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 497 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 554

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 555 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 613

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 614 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKL 666

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII---- 495
             +W + D    I   +  + +S T            F       G+Y    S  +    
Sbjct: 667 TVSWLKDDEPLYIGNRMKKEDDSLTI-----------FGVAERDQGSYTCVASTELDQDL 715

Query: 496 --SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
             +++T  G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   
Sbjct: 716 AKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQ-FQPGVWH 774

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDN 607
           +   Y   P + ++ +  L P   Y+  +    + G    S      +     P  NP +
Sbjct: 775 DHSKY---PGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGD 831

Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667
           V+G G+  NN+ I+WT M       P+ +Y + WRR  T EAWN  +V  W  S  V+  
Sbjct: 832 VKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQ 888

Query: 668 QPTFQPYEIKV 678
            P + PYEI+V
Sbjct: 889 TPVYVPYEIRV 899



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     +V        P  AP+    ++V+++    + WN V   +++
Sbjct: 895  YEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVK-VRVMNSTAISLQWNRVYSDTVQ 953

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 954  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGMVSRLFPYSNYKLEMVVVNGRG 1013

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+++GY +KY +  GT
Sbjct: 1014 DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLKYVAFNGT 1073

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            KVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 1074 KVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 1114



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 120/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 153 DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 212

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 213 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 272

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 273 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 332

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 333 HPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PD 390

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 391 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 448

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 449 APYWLDEPKNLIL 461



 Score = 47.8 bits (112), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 29/213 (13%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 133 LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 192

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 193 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 247

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 248 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 303

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQVPLEAPSN 407
              Y+C A+      I+ +   T++V    P N
Sbjct: 304 QTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN 336


>gi|149058631|gb|EDM09788.1| neurofascin, isoform CRA_d [Rattus norvegicus]
          Length = 1189

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 192/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 263 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 321

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 322 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 380

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 381 WLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 440

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 441 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 499

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 500 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 559

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 560 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKA 616

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 617 YLTVLADQATPTN 629



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 158/682 (23%), Positives = 264/682 (38%), Gaps = 92/682 (13%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 220 KNPFTLKV-LTNNPYNDSSLRNHPDIYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLE 278

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 279 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 335

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N   L      
Sbjct: 336 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWLVNGDPLQSAPPN 394

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 395 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 452

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 453 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 511

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 512 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKL 564

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTT-----------------TEVDKFVPASKNFARVLA 482
             +W + D    I   +  + +S T                 TE+D+ +  +K +  VLA
Sbjct: 565 TVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQDL--AKAYLTVLA 622

Query: 483 FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
                  P + + +   P+G P   + LE   L   +  L W+  +  N  +  Y ++++
Sbjct: 623 DQAT---PTNRLAAL--PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFE 677

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KY 596
             +  + G   +   +   P + ++ +  L P   Y+  +    + G    S      + 
Sbjct: 678 EDQ-FQPGVWHDHSKF---PGSVNSAVLHLSPYVNYQFRVIAVNEVGSSHPSLPSERYRT 733

Query: 597 LFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVL 656
               P  NP +V+G G+  NN+ I+WT M       P+ +Y + WRR  T E WN  +V 
Sbjct: 734 SGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVT 791

Query: 657 DWRQSELVLANQPTFQPYEIKV 678
            W  S  V+   P + PYEI+V
Sbjct: 792 VW-GSRYVVGQTPVYVPYEIRV 812



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP+    I+V+++    + WN V   +++
Sbjct: 808  YEIRVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVK-IRVLNSTAISLQWNRVYSDTVQ 866

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 867  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVGRLFPYSNYKLEMVVVNGRG 926

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY ++Y    GT
Sbjct: 927  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLRYVPFNGT 986

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 987  KLGKQMVENF----SPNQTKFSVQRADPVSRYRFSLSARTQVGSG 1027



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 120/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 230

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 231 NPYNDSSLRNHPDIYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PD 288

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 289 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 346

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 347 APYWLDEPKNLIL 359



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 99/251 (39%), Gaps = 47/251 (18%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
              Y+C A+          T T+Q      + FTL         V++ NP +  SLR H 
Sbjct: 202 QTDYSCNARFHF-------THTIQ----QKNPFTL--------KVLTNNPYNDSSLRNHP 242

Query: 436 RGYKVQTWTEK 446
             Y  +   E+
Sbjct: 243 DIYSARGVAER 253


>gi|149058630|gb|EDM09787.1| neurofascin, isoform CRA_c [Rattus norvegicus]
          Length = 1250

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 192/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 262 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 320

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 321 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 379

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 380 WLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 439

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 440 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 498

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 499 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 558

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 559 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKA 615

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 616 YLTVLADQATPTN 628



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 154/665 (23%), Positives = 263/665 (39%), Gaps = 75/665 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 177 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 235

Query: 113 AKSYSIDLSVLAA-----PYFTVEPEFINAAEE----ETVTFECKASGLPEPEIHWVHNG 163
              +++ +          P F + P+  ++++       +  EC ASG+P P+I W   G
Sbjct: 236 KNPFTLKVLTTRGVAERTPSF-MYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKG 294

Query: 164 KPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
             +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP   
Sbjct: 295 GDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYWL 350

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDV 277
           + PK+     G+   L CR  G PKP V W+ N   L        R    +T  +   D 
Sbjct: 351 DEPKNLILAPGEDGRLVCRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDT--IIFRDT 408

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
             +    Y C   N+ G    +  ++V +       P +  +        R +     S 
Sbjct: 409 QISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSP 468

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
             ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L 
Sbjct: 469 IPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRLE 527

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIRELI 456
           V+ P       T I  +   +       V  +    H    K+  +W + D    I   +
Sbjct: 528 VKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRM 580

Query: 457 VNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
             + +S T                 TE+D+ +  +K +  VLA       P + + +   
Sbjct: 581 KKEDDSLTIFGVAERDQGSYTCMASTELDQDL--AKAYLTVLADQAT---PTNRLAAL-- 633

Query: 500 PEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
           P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   + 
Sbjct: 634 PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKF- 691

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGS 613
             P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G+
Sbjct: 692 --PGSVNSAVLHLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGT 749

Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
             NN+ I+WT M       P+ +Y + WRR  T E WN  +V  W  S  V+   P + P
Sbjct: 750 RKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQTPVYVP 806

Query: 674 YEIKV 678
           YEI+V
Sbjct: 807 YEIRV 811



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 9/172 (5%)

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           ++W P++  S  G    Y V+ W  ++   +   + V        +   +VP      RV
Sbjct: 756 ITWTPMNATSAFGPNLRYIVK-WRRRETRETWNNVTVWGSRYVVGQTPVYVPYE---IRV 811

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
            A N    GP  E +   + E +P   +             L+W  PE PNG+L+GY ++
Sbjct: 812 QAENDFGKGPEPETVIGYSGEDLPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLR 871

Query: 541 YQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           Y    GTK+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 872 YVPFNGTKLGKQMVENF----SPNQTKFSVQRADPVSRYRFSLSARTQVGSG 919



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 120/296 (40%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 67  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 126

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 127 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 186

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T 
Sbjct: 187 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 246

Query: 310 --ITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             + ++   +    G S++            C A   P+    I W +     D  S+  
Sbjct: 247 RGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 302

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 303 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 358



 Score = 45.8 bits (107), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 29/206 (14%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 47  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 106

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 107 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 161

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 162 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 217

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQV 400
              Y+C A+      I+ +   T++V
Sbjct: 218 QTDYSCNARFHFTHTIQQKNPFTLKV 243


>gi|380810880|gb|AFE77315.1| neurofascin isoform 3 precursor [Macaca mulatta]
          Length = 1180

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 201/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 269 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 327

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 328 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 386

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 387 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 446

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 447 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 505

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 506 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 565

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 566 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 622

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 623 YLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 652



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 156/671 (23%), Positives = 258/671 (38%), Gaps = 85/671 (12%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 167 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 225

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 226 KNPFTLKV-LTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLE 284

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 285 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 341

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 342 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 400

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 401 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 458

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 459 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 517

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 518 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKL 570

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII---- 495
             +W + D    I   +  + +S T            F       G+Y    S  +    
Sbjct: 571 TVSWLKDDEPLYIGNRMKKEDDSLTI-----------FGVAERDQGSYTCVASTELDQDL 619

Query: 496 --SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
             +++T  G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   
Sbjct: 620 AKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWH 678

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDN 607
           +   Y   P + ++ +  L P   Y+  +    + G    S      +     P  NP +
Sbjct: 679 DHSKY---PGSVNSAVLRLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPGD 735

Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667
           V+G G+  NN+ I+WT M       P+ +Y + WRR  T EAWN  +V  W  S  V+  
Sbjct: 736 VKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQ 792

Query: 668 QPTFQPYEIKV 678
            P + PYEI+V
Sbjct: 793 TPVYVPYEIRV 803



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     +V        P  AP+    ++V+++    + WN V P +++
Sbjct: 799  YEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVK-VRVMNSTAISLQWNRVYPDTVQ 857

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 858  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRG 917

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG++ GY +KY +  GT
Sbjct: 918  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMTGYTLKYVAFNGT 977

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            KVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 978  KVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 1018



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 120/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 57  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 116

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 117 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 176

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 177 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 236

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 237 HPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PD 294

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 295 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 352

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 353 APYWLDEPKNLIL 365



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 87/215 (40%), Gaps = 29/215 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++  
Sbjct: 35  NELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 94

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
                + D           GEY CFARNK GTA     L+ +    ++  P    E+ + 
Sbjct: 95  RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 149

Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 150 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 205

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQVPLEAPSN 407
           D    Y+C A+      I+ +   T++V    P N
Sbjct: 206 DMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN 240


>gi|149058634|gb|EDM09791.1| neurofascin, isoform CRA_g [Rattus norvegicus]
          Length = 1234

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 192/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 246 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 304

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 305 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 363

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 364 WLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 423

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 424 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 482

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 483 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 542

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 543 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKA 599

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 600 YLTVLADQATPTN 612



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 154/665 (23%), Positives = 263/665 (39%), Gaps = 75/665 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAA-----PYFTVEPEFINAAEE----ETVTFECKASGLPEPEIHWVHNG 163
              +++ +          P F + P+  ++++       +  EC ASG+P P+I W   G
Sbjct: 220 KNPFTLKVLTTRGVAERTPSF-MYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKG 278

Query: 164 KPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
             +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP   
Sbjct: 279 GDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYWL 334

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDV 277
           + PK+     G+   L CR  G PKP V W+ N   L        R    +T  +   D 
Sbjct: 335 DEPKNLILAPGEDGRLVCRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDT--IIFRDT 392

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
             +    Y C   N+ G    +  ++V +       P +  +        R +     S 
Sbjct: 393 QISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSP 452

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
             ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L 
Sbjct: 453 IPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRLE 511

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIRELI 456
           V+ P       T I  +   +       V  +    H    K+  +W + D    I   +
Sbjct: 512 VKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRM 564

Query: 457 VNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
             + +S T                 TE+D+ +  +K +  VLA       P + + +   
Sbjct: 565 KKEDDSLTIFGVAERDQGSYTCMASTELDQDL--AKAYLTVLADQAT---PTNRLAAL-- 617

Query: 500 PEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
           P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   + 
Sbjct: 618 PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKF- 675

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGS 613
             P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G+
Sbjct: 676 --PGSVNSAVLHLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGT 733

Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
             NN+ I+WT M       P+ +Y + WRR  T E WN  +V  W  S  V+   P + P
Sbjct: 734 RKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQTPVYVP 790

Query: 674 YEIKV 678
           YEI+V
Sbjct: 791 YEIRV 795



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 9/172 (5%)

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           ++W P++  S  G    Y V+ W  ++   +   + V        +   +VP      RV
Sbjct: 740 ITWTPMNATSAFGPNLRYIVK-WRRRETRETWNNVTVWGSRYVVGQTPVYVPYE---IRV 795

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
            A N    GP  E +   + E +P   +             L+W  PE PNG+L+GY ++
Sbjct: 796 QAENDFGKGPEPETVIGYSGEDLPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLR 855

Query: 541 YQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           Y    GTK+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 856 YVPFNGTKLGKQMVENF----SPNQTKFSVQRADPVSRYRFSLSARTQVGSG 903



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 120/296 (40%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T 
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 230

Query: 310 --ITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             + ++   +    G S++            C A   P+    I W +     D  S+  
Sbjct: 231 RGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 286

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 287 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 342



 Score = 45.8 bits (107), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 29/206 (14%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQV 400
              Y+C A+      I+ +   T++V
Sbjct: 202 QTDYSCNARFHFTHTIQQKNPFTLKV 227


>gi|71891758|dbj|BAA34476.3| KIAA0756 protein [Homo sapiens]
          Length = 1222

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 200/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 316 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 374

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 375 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 433

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 434 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 493

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 494 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 552

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED     G +    C    D
Sbjct: 553 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHD 612

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 613 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 669

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 670 YLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 699



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 156/671 (23%), Positives = 258/671 (38%), Gaps = 85/671 (12%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 214 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 272

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 273 KNPFTLKV-LTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLE 331

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 332 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 388

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 389 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 447

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 448 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 505

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 506 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 564

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 565 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVARRGTTVQLECRVKHDPSLKL 617

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII---- 495
             +W + D    I   +  + +S T            F       G+Y    S  +    
Sbjct: 618 TVSWLKDDEPLYIGNRMKKEDDSLTI-----------FGVAERDQGSYTCVASTELDQDL 666

Query: 496 --SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
             +++T  G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   
Sbjct: 667 AKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQ-FQPGVWH 725

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDN 607
           +   Y   P + ++ +  L P   Y+  +    + G    S      +     P  NP +
Sbjct: 726 DHSKY---PGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGD 782

Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667
           V+G G+  NN+ I+WT M       P+ +Y + WRR  T EAWN  +V  W  S  V+  
Sbjct: 783 VKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQ 839

Query: 668 QPTFQPYEIKV 678
            P + PYEI+V
Sbjct: 840 TPVYVPYEIRV 850



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     +V        P  AP+    ++V+++    + WN V   +++
Sbjct: 846  YEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVK-VRVMNSTAISLQWNRVYSDTVQ 904

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 905  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRG 964

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+++GY +KY +  GT
Sbjct: 965  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLKYVAFNGT 1024

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            KVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 1025 KVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 1065



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 120/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 104 DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 163

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 164 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 223

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 224 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 283

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 284 HPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PD 341

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 342 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 399

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 400 APYWLDEPKNLIL 412



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 29/213 (13%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 84  LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 143

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 144 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 198

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 199 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 254

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQVPLEAPSN 407
              Y+C A+      I+ +   T++V    P N
Sbjct: 255 QTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN 287


>gi|237858625|ref|NP_001153785.1| neurofascin isoform 2 precursor [Rattus norvegicus]
          Length = 1189

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 192/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 263 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 321

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 322 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 380

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 381 WLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 440

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 441 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 499

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 500 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 559

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 560 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKA 616

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 617 YLTVLADQATPTN 629



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 158/682 (23%), Positives = 264/682 (38%), Gaps = 92/682 (13%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 220 KNPFTLKV-LTNNPYNDSSLRNHPDIYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLE 278

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 279 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 335

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N   L      
Sbjct: 336 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWLVNGDPLQSAPPN 394

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 395 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 452

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 453 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 511

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 512 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKL 564

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTT-----------------TEVDKFVPASKNFARVLA 482
             +W + D    I   +  + +S T                 TE+D+ +  +K +  VLA
Sbjct: 565 TVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQDL--AKAYLTVLA 622

Query: 483 FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
                  P + + +   P+G P   + LE   L   +  L W+  +  N  +  Y ++++
Sbjct: 623 DQAT---PTNRLAAL--PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFE 677

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KY 596
             +  + G   +   +   P + ++ +  L P   Y+  +    + G    S      + 
Sbjct: 678 EDQ-FQPGVWHDHSKF---PGSVNSAVLHLSPYVNYQFRVIAVNEVGSSHPSLPSERYRT 733

Query: 597 LFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVL 656
               P  NP +V+G G+  NN+ I+WT M       P+ +Y + WRR  T E WN  +V 
Sbjct: 734 SGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVT 791

Query: 657 DWRQSELVLANQPTFQPYEIKV 678
            W  S  V+   P + PYEI+V
Sbjct: 792 VW-GSRYVVGQTPVYVPYEIRV 812



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP+    I+V+++    + WN V P +++
Sbjct: 808  YEIRVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVK-IRVLNSTAISLQWNRVYPDTVQ 866

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 867  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVGRLFPYSNYKLEMVVVNGRG 926

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY ++Y    GT
Sbjct: 927  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLRYVPFNGT 986

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 987  KLGKQMVENF----SPNQTKFSVQRADPVSRYRFSLSARTQVGSG 1027



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 120/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 230

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 231 NPYNDSSLRNHPDIYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PD 288

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 289 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 346

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 347 APYWLDEPKNLIL 359



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 99/251 (39%), Gaps = 47/251 (18%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELT---GGRYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
              Y+C A+          T T+Q      + FTL         V++ NP +  SLR H 
Sbjct: 202 QTDYSCNARFHF-------THTIQ----QKNPFTL--------KVLTNNPYNDSSLRNHP 242

Query: 436 RGYKVQTWTEK 446
             Y  +   E+
Sbjct: 243 DIYSARGVAER 253


>gi|426333442|ref|XP_004028286.1| PREDICTED: neurofascin isoform 3 [Gorilla gorilla gorilla]
          Length = 1276

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 201/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 365 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 423

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 424 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 482

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 483 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 542

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 543 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 601

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 602 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 661

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 662 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 718

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 719 YLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 748



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 156/671 (23%), Positives = 258/671 (38%), Gaps = 85/671 (12%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 263 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 321

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 322 KNPFTLKV-LTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLE 380

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 381 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 437

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 438 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 496

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 497 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 554

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 555 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 613

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 614 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKL 666

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII---- 495
             +W + D    I   +  + +S T            F       G+Y    S  +    
Sbjct: 667 TVSWLKDDEPLYIGNRMKKEDDSLTI-----------FGVAERDQGSYTCVASTELDQDL 715

Query: 496 --SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
             +++T  G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   
Sbjct: 716 AKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQ-FQPGVWH 774

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDN 607
           +   Y   P + ++ +  L P   Y+  +    + G    S      +     P  NP +
Sbjct: 775 DHSKY---PGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGD 831

Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667
           V+G G+  NN+ I+WT M       P+ +Y + WRR  T EAWN  +V  W  S  V+  
Sbjct: 832 VKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQ 888

Query: 668 QPTFQPYEIKV 678
            P + PYEI+V
Sbjct: 889 TPVYVPYEIRV 899



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     +V        P  AP+    ++V+++    + WN V   +++
Sbjct: 895  YEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVK-VRVMNSTAISLQWNRVYSDTVQ 953

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 954  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRG 1013

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+++GY +KY +  GT
Sbjct: 1014 DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLKYVAFNGT 1073

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            KVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 1074 KVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 1114



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 120/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 153 DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 212

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 213 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 272

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 273 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 332

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 333 HPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PD 390

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 391 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 448

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 449 APYWLDEPKNLIL 461



 Score = 47.4 bits (111), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 29/213 (13%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 133 LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 192

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 193 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 247

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 248 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 303

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQVPLEAPSN 407
              Y+C A+      I+ +   T++V    P N
Sbjct: 304 QTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN 336


>gi|68534652|gb|AAH98401.1| NRCAM protein [Homo sapiens]
          Length = 771

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 139/384 (36%), Positives = 197/384 (51%), Gaps = 11/384 (2%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  + P +R    N+ K+L I HV  +D G+Y C
Sbjct: 277 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIIHVSEADSGNYQC 334

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+   P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 335 IAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 393

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 394 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 453

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 454 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 513

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 514 TGTYTCVARNKLGMAKNEVHLEIKDATWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTV 573

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  S+ RF    D+ L V   S+ DSG YTC A T LD + A A L+V   
Sbjct: 574 LWLKDNR--ELPSDERFTVDKDH-LVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDV 630

Query: 402 LEAPSNFTLIQVIDAKKAVVSWNP 425
              P +  L   +D K   +SW P
Sbjct: 631 PNPPFDLELTDQLD-KSVQLSWTP 653



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 207/517 (40%), Gaps = 56/517 (10%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W    K     P N  R V  N    + I ++ ++D+GNY C A
Sbjct: 282 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 336

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QK 257
            N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 337 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 395

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N+ G    +  + V         P +
Sbjct: 396 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPAN 455

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + + 
Sbjct: 456 TLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKD 512

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
            +G YTC A+ +L   + +  L ++       + T I V   + AVV          RG 
Sbjct: 513 STGTYTCVARNKLGMAKNEVHLEIK-------DATWI-VKQPEYAVVQ---------RGS 555

Query: 435 FRGYKVQTWTEKDGEGSIRELIVNK----GESTTTEVDKFVPASKNFARVLAFNGAYNG- 489
              ++ +   +     ++  L  N+     E  T + D  V A  +      +    N  
Sbjct: 556 MVSFECKVKHDHTLSLTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDSGTYTCVANTT 615

Query: 490 ----PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVK 545
                 S ++S V    VP     LE       +  L W   +  N  +  + I+Y+   
Sbjct: 616 LDSVSASAVLSVV---DVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAM 672

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV- 600
                P L         T T+A+L  L P   Y   +      G      A  +YL    
Sbjct: 673 HK---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKAS 728

Query: 601 -PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
            P KNP  VEG GS P+NLVI+W  +   E N P  +
Sbjct: 729 EPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQ 765



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 134/344 (38%), Gaps = 57/344 (16%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNG-------K 164
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  ISALEVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKD 86

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDT--GNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           P+    P      G   I I +  K++T  G Y C A N  G    +  V   + +P  T
Sbjct: 87  PLVTMKPG----TGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWT 142

Query: 223 EAPKDEYTVD-GKTVVLTCRVFGAPKPEVN-WIHN--QKELTGGRYTILETGDLKITDVA 278
           +   +  T+  G+++VL CR      P +  W+ N  Q+     R +    GDL  ++V 
Sbjct: 143 KEKLEPITLQSGQSLVLPCRPPIGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVL 202

Query: 279 FADSGE-YTCFAR-NKLGTAQGSGSLTVKE------HTHITDQPEDYEVEAGQSATFR-- 328
             D+ E Y C+AR N   T Q    ++VK       +  I     D E    +S+  R  
Sbjct: 203 PEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFYGAKSSRERPP 262

Query: 329 ------CNAVSDPSLKLSIVWLRG-----SEPIDFESEP-------RFVQSN-DYSLTVT 369
                  NA +   L+ +++ L         PI + ++        R V  N + +L + 
Sbjct: 263 TFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQII 322

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             SE DSG Y C A+  L  I    ++ V+     + AP N  L
Sbjct: 323 HVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLVL 366


>gi|380788299|gb|AFE66025.1| neurofascin isoform 4 precursor [Macaca mulatta]
          Length = 1169

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 201/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 263 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 321

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 322 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 380

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 381 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 440

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 441 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 499

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 500 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 559

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 560 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 616

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 617 YLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 646



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 156/671 (23%), Positives = 258/671 (38%), Gaps = 85/671 (12%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 220 KNPFTLKV-LTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLE 278

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 279 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 335

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 336 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 394

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 395 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 452

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 453 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 511

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 512 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKL 564

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII---- 495
             +W + D    I   +  + +S T            F       G+Y    S  +    
Sbjct: 565 TVSWLKDDEPLYIGNRMKKEDDSLTI-----------FGVAERDQGSYTCVASTELDQDL 613

Query: 496 --SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
             +++T  G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   
Sbjct: 614 AKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWH 672

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDN 607
           +   Y   P + ++ +  L P   Y+  +    + G    S      +     P  NP +
Sbjct: 673 DHSKY---PGSVNSAVLRLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPGD 729

Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667
           V+G G+  NN+ I+WT M       P+ +Y + WRR  T EAWN  +V  W  S  V+  
Sbjct: 730 VKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQ 786

Query: 668 QPTFQPYEIKV 678
            P + PYEI+V
Sbjct: 787 TPVYVPYEIRV 797



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     +V        P  AP+    ++V+++    + WN V P +++
Sbjct: 793  YEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVK-VRVMNSTAISLQWNRVYPDTVQ 851

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 852  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRG 911

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG++ GY +KY +  GT
Sbjct: 912  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMTGYTLKYVAFNGT 971

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            KVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 972  KVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 1012



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 120/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 230

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 231 HPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PD 288

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 289 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 346

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 347 APYWLDEPKNLIL 359



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 29/213 (13%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQVPLEAPSN 407
              Y+C A+      I+ +   T++V    P N
Sbjct: 202 QTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN 234


>gi|390477462|ref|XP_002760747.2| PREDICTED: neurofascin isoform 2 [Callithrix jacchus]
          Length = 1347

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 252 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 310

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 311 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 369

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 370 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 429

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 430 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 488

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 489 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 548

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 549 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 605

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 606 YLTVLADQATPTN 618



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 155/666 (23%), Positives = 261/666 (39%), Gaps = 77/666 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 167 GLPSPVIFWMSSSMEPIAQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 225

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 226 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 283

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 284 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 339

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 340 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 397

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 398 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 457

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 458 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 516

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIREL 455
            V+ P       T I  +   +       V  +    H    K+  +W + D    I   
Sbjct: 517 EVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNR 569

Query: 456 IVNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
           +  + +S T                 TE+D+ +  +K +  VLA       P + + +  
Sbjct: 570 MKKEDDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLADQAT---PTNRLAAL- 623

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
            P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   Y
Sbjct: 624 -PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKY 681

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRG 612
              P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G
Sbjct: 682 ---PGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEG 738

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
           +  NN+ I+WT M       P+ +Y + WRR  T EAWN  +V  W  S  V+   P + 
Sbjct: 739 TRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQTPVYV 795

Query: 673 PYEIKV 678
           PYEI+V
Sbjct: 796 PYEIRV 801



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 100/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     +V        P  AP+    ++V+++    + WN V P +++
Sbjct: 797  YEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVK-VRVVNSTAINLQWNRVYPDTVQ 855

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 856  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRG 915

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+++GY +KY +  GT
Sbjct: 916  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMLGYTLKYVAFNGT 975

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            KVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 976  KVGKQIVENF----SPNQTKFVVQRTDPVSRYRFTLSARTQVGSG 1016



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 57  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 116

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 117 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 176

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK---- 305
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K    
Sbjct: 177 SSSMEPIAQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 236

Query: 306 ----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
               E T     P+       V  G      C A   P+    I W +     D  S+  
Sbjct: 237 RGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 292

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 293 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 348



 Score = 47.8 bits (112), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++  
Sbjct: 35  NELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 94

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
                + D           GEY CFARNK GTA     L+ +    ++  P    E+ + 
Sbjct: 95  RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 149

Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 150 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--AQDKRVSQGHNGDLYFSNVMLQ 205

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
           D    Y+C A+      I+ +   T++V
Sbjct: 206 DMQTDYSCNARFHFTHTIQQKNPFTLKV 233


>gi|402857487|ref|XP_003893285.1| PREDICTED: neurofascin [Papio anubis]
          Length = 1446

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 354 TASSQMVLRGMDLLLECIASGXPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 412

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 413 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 471

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 472 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 531

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 532 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 590

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 591 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 650

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 651 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 707

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 708 YLTVLADQATPTN 720



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 155/666 (23%), Positives = 260/666 (39%), Gaps = 77/666 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 269 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 327

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG P P+I W   
Sbjct: 328 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGXPTPDIAWYKK 385

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 386 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 441

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 442 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 499

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 500 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 559

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 560 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 618

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIREL 455
            V+ P       T I  +   +       V  +    H    K+  +W + D    I   
Sbjct: 619 EVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNR 671

Query: 456 IVNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
           +  + +S T                 TE+D+ +  +K +  VLA       P + + +  
Sbjct: 672 MKKEDDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLADQAT---PTNRLAAL- 725

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
            P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   Y
Sbjct: 726 -PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKY 783

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRG 612
              P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G
Sbjct: 784 ---PGSVNSAVLRLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPGDVKGEG 840

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
           +  NN+ I+WT M       P+ +Y + WRR  T EAWN  +V  W  S  V+   P + 
Sbjct: 841 TRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQTPVYV 897

Query: 673 PYEIKV 678
           PYEI+V
Sbjct: 898 PYEIRV 903



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     +V        P  AP+    ++V+++    + WN V P +++
Sbjct: 899  YEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVK-VRVMNSTAISLQWNRVYPDTVQ 957

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 958  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRG 1017

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG++ GY +KY +  GT
Sbjct: 1018 DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMTGYTLKYVAFNGT 1077

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            KVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 1078 KVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 1118



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 159 DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 218

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 219 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 278

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK---- 305
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K    
Sbjct: 279 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 338

Query: 306 ----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
               E T     P+       V  G      C A   P+    I W +     D  S+  
Sbjct: 339 RGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGXPT--PDIAWYKKGG--DLPSDKA 394

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 395 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 450



 Score = 47.4 bits (111), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++  
Sbjct: 137 NELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 196

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
                + D           GEY CFARNK GTA     L+ +    ++  P    E+ + 
Sbjct: 197 RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 251

Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 252 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 307

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
           D    Y+C A+      I+ +   T++V
Sbjct: 308 DMQTDYSCNARFHFTHTIQQKNPFTLKV 335


>gi|390477460|ref|XP_002760748.2| PREDICTED: neurofascin isoform 3 [Callithrix jacchus]
          Length = 1169

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 201/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 263 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 321

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 322 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 380

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 381 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 440

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 441 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 499

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 500 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 559

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 560 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 616

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 617 YLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 646



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 156/671 (23%), Positives = 258/671 (38%), Gaps = 85/671 (12%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPIAQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 220 KNPFTLKV-LTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLE 278

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 279 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 335

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 336 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 394

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 395 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 452

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 453 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 511

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 512 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKL 564

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII---- 495
             +W + D    I   +  + +S T            F       G+Y    S  +    
Sbjct: 565 TVSWLKDDEPLYIGNRMKKEDDSLTI-----------FGVAERDQGSYTCVASTELDQDL 613

Query: 496 --SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
             +++T  G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   
Sbjct: 614 AKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWH 672

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDN 607
           +   Y   P + ++ +  L P   Y+  +    + G    S      +     P  NP +
Sbjct: 673 DHSKY---PGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGD 729

Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667
           V+G G+  NN+ I+WT M       P+ +Y + WRR  T EAWN  +V  W  S  V+  
Sbjct: 730 VKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQ 786

Query: 668 QPTFQPYEIKV 678
            P + PYEI+V
Sbjct: 787 TPVYVPYEIRV 797



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 100/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     +V        P  AP+    ++V+++    + WN V P +++
Sbjct: 793  YEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVK-VRVVNSTAINLQWNRVYPDTVQ 851

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 852  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRG 911

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+++GY +KY +  GT
Sbjct: 912  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMLGYTLKYVAFNGT 971

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            KVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 972  KVGKQIVENF----SPNQTKFVVQRTDPVSRYRFTLSARTQVGSG 1012



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 120/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 171 SSSMEPIAQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 230

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 231 HPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PD 288

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 289 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 346

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 347 APYWLDEPKNLIL 359



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 29/213 (13%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--AQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQVPLEAPSN 407
              Y+C A+      I+ +   T++V    P N
Sbjct: 202 QTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN 234


>gi|380788287|gb|AFE66019.1| neurofascin isoform 3 precursor [Macaca mulatta]
          Length = 1174

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 201/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 263 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 321

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 322 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 380

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 381 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 440

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 441 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 499

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 500 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 559

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 560 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 616

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 617 YLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 646



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 156/671 (23%), Positives = 258/671 (38%), Gaps = 85/671 (12%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 220 KNPFTLKV-LTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLE 278

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 279 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 335

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 336 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 394

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 395 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 452

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 453 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 511

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 512 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKL 564

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII---- 495
             +W + D    I   +  + +S T            F       G+Y    S  +    
Sbjct: 565 TVSWLKDDEPLYIGNRMKKEDDSLTI-----------FGVAERDQGSYTCVASTELDQDL 613

Query: 496 --SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
             +++T  G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   
Sbjct: 614 AKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWH 672

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDN 607
           +   Y   P + ++ +  L P   Y+  +    + G    S      +     P  NP +
Sbjct: 673 DHSKY---PGSVNSAVLRLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPGD 729

Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667
           V+G G+  NN+ I+WT M       P+ +Y + WRR  T EAWN  +V  W  S  V+  
Sbjct: 730 VKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQ 786

Query: 668 QPTFQPYEIKV 678
            P + PYEI+V
Sbjct: 787 TPVYVPYEIRV 797



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     +V        P  AP+    ++V+++    + WN V P +++
Sbjct: 793  YEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVK-VRVMNSTAISLQWNRVYPDTVQ 851

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 852  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRG 911

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG++ GY +KY +  GT
Sbjct: 912  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMTGYTLKYVAFNGT 971

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            KVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 972  KVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 1012



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 120/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 230

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 231 HPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PD 288

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 289 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 346

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 347 APYWLDEPKNLIL 359



 Score = 47.8 bits (112), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 29/213 (13%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQVPLEAPSN 407
              Y+C A+      I+ +   T++V    P N
Sbjct: 202 QTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN 234


>gi|149058628|gb|EDM09785.1| neurofascin, isoform CRA_a [Rattus norvegicus]
          Length = 1205

 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 192/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 279 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 337

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 338 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 396

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 397 WLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 456

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 457 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 515

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 516 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 575

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 576 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKA 632

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 633 YLTVLADQATPTN 645



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 158/682 (23%), Positives = 264/682 (38%), Gaps = 92/682 (13%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 177 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 235

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 236 KNPFTLKV-LTNNPYNDSSLRNHPDIYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLE 294

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 295 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 351

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N   L      
Sbjct: 352 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWLVNGDPLQSAPPN 410

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 411 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 468

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 469 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 527

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 528 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKL 580

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTT-----------------TEVDKFVPASKNFARVLA 482
             +W + D    I   +  + +S T                 TE+D+ +  +K +  VLA
Sbjct: 581 TVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQDL--AKAYLTVLA 638

Query: 483 FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
                  P + + +   P+G P   + LE   L   +  L W+  +  N  +  Y ++++
Sbjct: 639 DQAT---PTNRLAAL--PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFE 693

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KY 596
             +  + G   +   +   P + ++ +  L P   Y+  +    + G    S      + 
Sbjct: 694 EDQ-FQPGVWHDHSKF---PGSVNSAVLHLSPYVNYQFRVIAVNEVGSSHPSLPSERYRT 749

Query: 597 LFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVL 656
               P  NP +V+G G+  NN+ I+WT M       P+ +Y + WRR  T E WN  +V 
Sbjct: 750 SGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVT 807

Query: 657 DWRQSELVLANQPTFQPYEIKV 678
            W  S  V+   P + PYEI+V
Sbjct: 808 VW-GSRYVVGQTPVYVPYEIRV 828



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP+    I+V+++    + WN V   +++
Sbjct: 824  YEIRVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVK-IRVLNSTAISLQWNRVYSDTVQ 882

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 883  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVGRLFPYSNYKLEMVVVNGRG 942

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY ++Y    GT
Sbjct: 943  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLRYVPFNGT 1002

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 1003 KLGKQMVENF----SPNQTKFSVQRADPVSRYRFSLSARTQVGSG 1043



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 121/320 (37%), Gaps = 47/320 (14%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 67  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 126

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 127 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 186

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 187 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 246

Query: 310 -------ITDQPEDYEVEA----------------------GQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                          G      C A   P+    
Sbjct: 247 NPYNDSSLRNHPDIYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PD 304

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 305 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 362

Query: 401 P---LEAPSNFTLIQVIDAK 417
               L+ P N  L    D +
Sbjct: 363 APYWLDEPKNLILAPGEDGR 382



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 99/251 (39%), Gaps = 47/251 (18%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELT---GGRYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 47  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 106

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 107 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 161

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 162 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 217

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
              Y+C A+          T T+Q      + FTL         V++ NP +  SLR H 
Sbjct: 218 QTDYSCNARFHF-------THTIQ----QKNPFTL--------KVLTNNPYNDSSLRNHP 258

Query: 436 RGYKVQTWTEK 446
             Y  +   E+
Sbjct: 259 DIYSARGVAER 269


>gi|237858623|ref|NP_001153786.1| neurofascin isoform 1 precursor [Rattus norvegicus]
 gi|38372259|sp|P97685.2|NFASC_RAT RecName: Full=Neurofascin; Flags: Precursor
          Length = 1240

 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 192/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 252 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 310

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 311 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 369

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 370 WLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 429

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 430 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 488

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 489 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 548

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 549 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKA 605

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 606 YLTVLADQATPTN 618



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 154/665 (23%), Positives = 263/665 (39%), Gaps = 75/665 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 167 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 225

Query: 113 AKSYSIDLSVLAA-----PYFTVEPEFINAAEE----ETVTFECKASGLPEPEIHWVHNG 163
              +++ +          P F + P+  ++++       +  EC ASG+P P+I W   G
Sbjct: 226 KNPFTLKVLTTRGVAERTPSF-MYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKG 284

Query: 164 KPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
             +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP   
Sbjct: 285 GDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYWL 340

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDV 277
           + PK+     G+   L CR  G PKP V W+ N   L        R    +T  +   D 
Sbjct: 341 DEPKNLILAPGEDGRLVCRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDT--IIFRDT 398

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
             +    Y C   N+ G    +  ++V +       P +  +        R +     S 
Sbjct: 399 QISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSP 458

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
             ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L 
Sbjct: 459 IPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRLE 517

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIRELI 456
           V+ P       T I  +   +       V  +    H    K+  +W + D    I   +
Sbjct: 518 VKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRM 570

Query: 457 VNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
             + +S T                 TE+D+ +  +K +  VLA       P + + +   
Sbjct: 571 KKEDDSLTIFGVAERDQGSYTCMASTELDQDL--AKAYLTVLADQAT---PTNRLAAL-- 623

Query: 500 PEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
           P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   + 
Sbjct: 624 PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKF- 681

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGS 613
             P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G+
Sbjct: 682 --PGSVNSAVLHLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGT 739

Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
             NN+ I+WT M       P+ +Y + WRR  T E WN  +V  W  S  V+   P + P
Sbjct: 740 RKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQTPVYVP 796

Query: 674 YEIKV 678
           YEI+V
Sbjct: 797 YEIRV 801



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 120/296 (40%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 57  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 116

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 117 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 176

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T 
Sbjct: 177 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 236

Query: 310 --ITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             + ++   +    G S++            C A   P+    I W +     D  S+  
Sbjct: 237 RGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 292

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 293 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 348



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 9/172 (5%)

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           ++W P++  S  G    Y V+ W  ++   +   + V        +   +VP      RV
Sbjct: 746 ITWTPMNATSAFGPNLRYIVK-WRRRETRETWNNVTVWGSRYVVGQTPVYVPYE---IRV 801

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
            A N    GP  E +   + E +P   +             L+W  PE PNG+L+GY ++
Sbjct: 802 QAENDFGKGPEPETVIGYSGEDLPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLR 861

Query: 541 YQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           Y    GTK+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 862 YVPFNGTKLGKQMVENF----SPNQTKFSVQRADPVSRYRFSLSARTQVGSG 909



 Score = 47.0 bits (110), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++  
Sbjct: 35  NELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 94

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
                + D           GEY CFARNK GTA     L+ +    ++  P    E+ + 
Sbjct: 95  RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 149

Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 150 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 205

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
           D    Y+C A+      I+ +   T++V
Sbjct: 206 DMQTDYSCNARFHFTHTIQQKNPFTLKV 233


>gi|410986305|ref|XP_003999451.1| PREDICTED: neurofascin isoform 3 [Felis catus]
          Length = 1351

 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 253 TASSQMVLRGMDLVLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 311

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 312 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 370

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 371 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 430

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 431 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 489

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 490 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 549

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 550 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 606

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 607 YLTVLADQATPTN 619



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 153/666 (22%), Positives = 261/666 (39%), Gaps = 77/666 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 168 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 226

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
             ++++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 227 KNAFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LVLECIASGVPTPDIAWYKK 284

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 285 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 340

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 341 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 398

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 399 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 458

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 459 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 517

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIREL 455
            V+ P       T I  +   +       V  +    H    K+  +W + D    I   
Sbjct: 518 EVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNR 570

Query: 456 IVNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
           +  + +S T                 TE+D+ +  +K +  VLA       P + + +  
Sbjct: 571 MKKEDDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLADQAT---PTNRLAAL- 624

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
            P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   +
Sbjct: 625 -PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKF 682

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRG 612
              P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G
Sbjct: 683 ---PGSVNSAVLQLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEG 739

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
           +  NN+ I+WT M       P+ +Y + WRR  T E WN  +V  W  S  V+   P + 
Sbjct: 740 TRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQTPVYV 796

Query: 673 PYEIKV 678
           PYEI+V
Sbjct: 797 PYEIRV 802



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 101/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP++   I+V+++    + WN V P +++
Sbjct: 798  YEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVK-IRVLNSTAISLQWNRVYPDTVQ 856

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     S+     R+     G+     V +  P S     ++  NG  
Sbjct: 857  GQLREYRAYYWRESSLLKSLWVSQKRQQASFPGDRPRGVVSRLFPYSNYKLEMVVVNGRG 916

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY +KY +  GT
Sbjct: 917  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLKYVAFNGT 976

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 977  KLGKQIVENF----SPNQTKFTMQRADPVSRYRFTLSARTQVGSG 1017



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 118/296 (39%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 58  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 117

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 118 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 177

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK---- 305
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q   + T+K    
Sbjct: 178 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNAFTLKVLTT 237

Query: 306 ----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
               E T     P+       V  G      C A   P+    I W +     D  S+  
Sbjct: 238 RGVAERTPSFMYPQGTASSQMVLRGMDLVLECIASGVPT--PDIAWYKKGG--DLPSDKA 293

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 294 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 349



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 86/208 (41%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L+  P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++  
Sbjct: 36  NELSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 95

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
                + D           GEY CFARNK GTA     L+ +    ++  P    E+ + 
Sbjct: 96  RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 150

Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 151 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 206

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
           D    Y+C A+      I+ +   T++V
Sbjct: 207 DMQTDYSCNARFHFTHTIQQKNAFTLKV 234


>gi|410986301|ref|XP_003999449.1| PREDICTED: neurofascin isoform 1 [Felis catus]
          Length = 1170

 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 201/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 264 TASSQMVLRGMDLVLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 322

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 323 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 381

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 382 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 441

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 442 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 500

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 501 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 560

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 561 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 617

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 618 YLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 647



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 154/671 (22%), Positives = 258/671 (38%), Gaps = 85/671 (12%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 162 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 220

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
             ++++ + +   PY        P+  +A    E T +F                    E
Sbjct: 221 KNAFTLKV-LTNNPYNDSSLRNHPDIYSARGVAERTPSFMYPQGTASSQMVLRGMDLVLE 279

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 280 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 336

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 337 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 395

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 396 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 453

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 454 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 512

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 513 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKL 565

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII---- 495
             +W + D    I   +  + +S T            F       G+Y    S  +    
Sbjct: 566 TVSWLKDDEPLYIGNRMKKEDDSLTI-----------FGVAERDQGSYTCVASTELDQDL 614

Query: 496 --SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
             +++T  G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   
Sbjct: 615 AKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWH 673

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDN 607
           +   +   P + ++ +  L P   Y+  +    + G    S      +     P  NP +
Sbjct: 674 DHSKF---PGSVNSAVLQLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPAD 730

Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667
           V+G G+  NN+ I+WT M       P+ +Y + WRR  T E WN  +V  W  S  V+  
Sbjct: 731 VKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQ 787

Query: 668 QPTFQPYEIKV 678
            P + PYEI+V
Sbjct: 788 TPVYVPYEIRV 798



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 101/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP++   I+V+++    + WN V P +++
Sbjct: 794  YEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVK-IRVLNSTAISLQWNRVYPDTVQ 852

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     S+     R+     G+     V +  P S     ++  NG  
Sbjct: 853  GQLREYRAYYWRESSLLKSLWVSQKRQQASFPGDRPRGVVSRLFPYSNYKLEMVVVNGRG 912

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY +KY +  GT
Sbjct: 913  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLKYVAFNGT 972

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 973  KLGKQIVENF----SPNQTKFTMQRADPVSRYRFTLSARTQVGSG 1013



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 121/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 52  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 111

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 112 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 171

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q   + T+K  T+
Sbjct: 172 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNAFTLKVLTN 231

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 232 NPYNDSSLRNHPDIYSARGVAERTPSFMYPQGTASSQMVLRGMDLVLECIASGVPT--PD 289

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 290 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 347

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 348 APYWLDEPKNLIL 360



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 100/251 (39%), Gaps = 47/251 (18%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L+  P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 32  LSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 91

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 92  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 146

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 147 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 202

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
              Y+C A+          T T+Q      + FTL         V++ NP +  SLR H 
Sbjct: 203 QTDYSCNARFHF-------THTIQ----QKNAFTL--------KVLTNNPYNDSSLRNHP 243

Query: 436 RGYKVQTWTEK 446
             Y  +   E+
Sbjct: 244 DIYSARGVAER 254


>gi|345797902|ref|XP_003434374.1| PREDICTED: neurofascin [Canis lupus familiaris]
          Length = 1169

 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 201/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 263 TASSQMVLRGTDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 321

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 322 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 380

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 381 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 440

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 441 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 499

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 500 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 559

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 560 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 616

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 617 YLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 646



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 154/671 (22%), Positives = 257/671 (38%), Gaps = 85/671 (12%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
             ++++ + +   PY        P+  +A    E T +F                    E
Sbjct: 220 KNAFTLKV-LTNNPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGTDLLLE 278

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 279 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 335

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 336 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 394

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 395 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 452

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 453 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 511

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 512 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKL 564

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII---- 495
             +W + D    I   +  + +S T            F       G+Y    S  +    
Sbjct: 565 TVSWLKDDEPLYIGNRMKKEDDSLTI-----------FGVAERDQGSYTCVASTELDQDL 613

Query: 496 --SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
             +++T  G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   
Sbjct: 614 AKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWH 672

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDN 607
           +   +   P + ++ +  L P   Y+  +    + G    S      +     P  NP +
Sbjct: 673 DHSKF---PGSVNSAILQLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPAD 729

Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667
           V+G G+  NN+ I+WT M       P+ +Y + WRR  T E WN   V  W  S  V+  
Sbjct: 730 VKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWNNATV--W-GSRYVVGQ 786

Query: 668 QPTFQPYEIKV 678
            P + PYEI+V
Sbjct: 787 TPVYVPYEIRV 797



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 101/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP++   I+V+++    + WN V P +++
Sbjct: 793  YEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVK-IRVLNSTAISLQWNRVYPDTVQ 851

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 852  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVSRLFPYSNYKLEMVVVNGRG 911

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY +KY +  GT
Sbjct: 912  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLKYVAFNGT 971

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 972  KLGKQIVENF----SPNQTKFTMQRADPVSRYRFTLSARTQVGSG 1012



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 121/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RRK G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRKSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q   + T+K  T+
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNAFTLKVLTN 230

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 231 NPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGTDLLLECIASGVPT--PD 288

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 289 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 346

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 347 APYWLDEPKNLIL 359



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 100/251 (39%), Gaps = 47/251 (18%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L+  P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRKS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
              Y+C A+          T T+Q      + FTL         V++ NP +  SLR H 
Sbjct: 202 QTDYSCNARFHF-------THTIQ----QKNAFTL--------KVLTNNPYNDSSLRNHP 242

Query: 436 RGYKVQTWTEK 446
             Y  +   E+
Sbjct: 243 DMYSARGVAER 253


>gi|119603836|gb|EAW83430.1| neuronal cell adhesion molecule, isoform CRA_d [Homo sapiens]
          Length = 1084

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 173/550 (31%), Positives = 253/550 (46%), Gaps = 43/550 (7%)

Query: 24  ISASQNRHAPK-----QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPS 77
           ISA  +R  P      +   + K+E  LR   + L CI  G P P   W+K DG  + P 
Sbjct: 143 ISAKSSRERPPTFLTPEGNASNKEE--LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPK 198

Query: 78  DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINA 137
           +R    N+ K+L I HV  +D G+Y C   N +G A  ++I + V AAPY+   P+ +  
Sbjct: 199 NRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALG-AIHHTISVRVKAAPYWITAPQNLVL 257

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  E  T  C+A+G P+P I W+ NG PI  AP +P RK+  + I   N+++  +  Y C
Sbjct: 258 SPGEDGTLICRANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQC 317

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQ 256
           NA+N  GY+  + +VNVLA  P I       Y V   +  +L C  FG+P P + W    
Sbjct: 318 NASNEYGYLLANAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGA 377

Query: 257 K--ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
           K   L    Y + E G L+I       +G YTC ARNKLG A+    L +K+ T I  QP
Sbjct: 378 KGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDATWIVKQP 437

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           E   V+ G   +F C    D +L L+++WL+ +   +  S+ RF    D+ L V   S+ 
Sbjct: 438 EYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNR--ELPSDERFTVDKDH-LVVADVSDD 494

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPS----------NFTLIQVIDAKKAVVSWN 424
           DSG YTC A T LD + A A L+V  P   P+          +  L   +D K   +SW 
Sbjct: 495 DSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWT 553

Query: 425 PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN 484
           P    +       + ++        G         G  TT ++ K  P      RV+A N
Sbjct: 554 PGDDNN--SPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQL-KLSPYVNYSFRVMAVN 610

Query: 485 GAYNGPPSE-----IISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPE---QPNGVLMG 536
                 PSE     +     P+  P  V+ L + P       + W KP    + NG  + 
Sbjct: 611 SIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEP---DNLVITW-KPLNGFESNGPGLQ 666

Query: 537 YKIKYQSVKG 546
           YK+ ++   G
Sbjct: 667 YKVSWRQKDG 676



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 164/640 (25%), Positives = 258/640 (40%), Gaps = 66/640 (10%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTC--EVSNGVGEAKSYSIDLSVLAA------PYF 128
           S+R+SQG  G       +    +  Y C    ++     +   I + V++A      P  
Sbjct: 95  SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISAKSSRERPPT 154

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---R 181
            + PE   + +EE     ++ EC A GLP P I+W    K     P N  R V  N    
Sbjct: 155 FLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKT 209

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR 241
           + I ++ ++D+GNY C A N+LG ++  + V V A AP    AP++     G+   L CR
Sbjct: 210 LQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICR 268

Query: 242 VFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQG 298
             G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    
Sbjct: 269 ANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLA 328

Query: 299 SGSLTVKEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           +  + V         P +  Y+V A + A   C     P    +I W +G++      E 
Sbjct: 329 NAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-ED 385

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDA 416
            +V   + +L +  + +  +G YTC A+ +L   + +  L ++       + T I     
Sbjct: 386 IYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIK-------DATWIVKQPE 438

Query: 417 KKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
              V   + VS +    H     +     KD     REL  +  E  T + D  V A  +
Sbjct: 439 YAVVQRGSMVSFECKVKHDHTLSLTVLWLKDN----RELPSD--ERFTVDKDHLVVADVS 492

Query: 477 FARVLAFNGAYNG-----PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKW 524
                 +    N        S ++S V P   P  V  +   P           +  L W
Sbjct: 493 DDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSW 552

Query: 525 VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAG 584
              +  N  +  + I+Y+        P L         T T+A+L  L P   Y   +  
Sbjct: 553 TPGDDNNSPITKFIIEYEDAMHK---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMA 608

Query: 585 YTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
               G      A  +YL     P KNP  VEG GS P+NLVI+W  +   E N P  +Y+
Sbjct: 609 VNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYK 668

Query: 639 IFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           + WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 669 VSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 706



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
           +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 729 LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 787

Query: 460 -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 788 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 847

Query: 515 LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
               +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 848 PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIP----ANKTRWTLKNL 903

Query: 573 EPSTKYRIHLAGYTKAGDGAE 593
             ST+Y+ +    T AG G++
Sbjct: 904 NFSTRYKFYFYAQTSAGSGSQ 924



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 138/605 (22%), Positives = 226/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 265 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 320

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 321 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 378

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +   A  I + 
Sbjct: 379 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDATWIVKQ 436

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 437 PEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDS 496

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 497 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 551

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 552 WTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 611

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 612 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 670

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 671 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDMGFAPEPAVVMGHSGE 727

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 728 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 787

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 788 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 840

Query: 616 NNLVI 620
           ++L I
Sbjct: 841 SSLKI 845


>gi|237858679|ref|NP_001153804.1| neurofascin isoform 3 precursor [Homo sapiens]
          Length = 1174

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 200/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 263 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 321

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 322 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 380

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 381 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 440

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 441 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 499

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED     G +    C    D
Sbjct: 500 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHD 559

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 560 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 616

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 617 YLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 646



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 156/671 (23%), Positives = 258/671 (38%), Gaps = 85/671 (12%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 220 KNPFTLKV-LTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLE 278

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 279 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 335

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 336 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 394

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 395 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 452

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 453 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 511

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 512 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVARRGTTVQLECRVKHDPSLKL 564

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII---- 495
             +W + D    I   +  + +S T            F       G+Y    S  +    
Sbjct: 565 TVSWLKDDEPLYIGNRMKKEDDSLTI-----------FGVAERDQGSYTCVASTELDQDL 613

Query: 496 --SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
             +++T  G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   
Sbjct: 614 AKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQ-FQPGVWH 672

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDN 607
           +   Y   P + ++ +  L P   Y+  +    + G    S      +     P  NP +
Sbjct: 673 DHSKY---PGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGD 729

Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667
           V+G G+  NN+ I+WT M       P+ +Y + WRR  T EAWN  +V  W  S  V+  
Sbjct: 730 VKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQ 786

Query: 668 QPTFQPYEIKV 678
            P + PYEI+V
Sbjct: 787 TPVYVPYEIRV 797



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     +V        P  AP+    ++V+++    + WN V   +++
Sbjct: 793  YEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVK-VRVMNSTAISLQWNRVYSDTVQ 851

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 852  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRG 911

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+++GY +KY +  GT
Sbjct: 912  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLKYVAFNGT 971

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            KVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 972  KVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 1012



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 120/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 230

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 231 HPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PD 288

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 289 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 346

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 347 APYWLDEPKNLIL 359



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 29/213 (13%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQVPLEAPSN 407
              Y+C A+      I+ +   T++V    P N
Sbjct: 202 QTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN 234


>gi|89903008|ref|NP_055905.2| neurofascin isoform 4 precursor [Homo sapiens]
 gi|168273078|dbj|BAG10378.1| neurofascin precursor [synthetic construct]
 gi|187952493|gb|AAI37014.1| Neurofascin homolog (chicken) [Homo sapiens]
          Length = 1169

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 200/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 263 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 321

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 322 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 380

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 381 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 440

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 441 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 499

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED     G +    C    D
Sbjct: 500 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHD 559

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 560 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 616

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 617 YLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 646



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 156/671 (23%), Positives = 258/671 (38%), Gaps = 85/671 (12%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 220 KNPFTLKV-LTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLE 278

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 279 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 335

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 336 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 394

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 395 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 452

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 453 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 511

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 512 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVARRGTTVQLECRVKHDPSLKL 564

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII---- 495
             +W + D    I   +  + +S T            F       G+Y    S  +    
Sbjct: 565 TVSWLKDDEPLYIGNRMKKEDDSLTI-----------FGVAERDQGSYTCVASTELDQDL 613

Query: 496 --SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
             +++T  G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   
Sbjct: 614 AKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQ-FQPGVWH 672

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDN 607
           +   Y   P + ++ +  L P   Y+  +    + G    S      +     P  NP +
Sbjct: 673 DHSKY---PGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGD 729

Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667
           V+G G+  NN+ I+WT M       P+ +Y + WRR  T EAWN  +V  W  S  V+  
Sbjct: 730 VKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQ 786

Query: 668 QPTFQPYEIKV 678
            P + PYEI+V
Sbjct: 787 TPVYVPYEIRV 797



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     +V        P  AP+    ++V+++    + WN V   +++
Sbjct: 793  YEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVK-VRVMNSTAISLQWNRVYSDTVQ 851

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 852  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRG 911

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+++GY +KY +  GT
Sbjct: 912  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLKYVAFNGT 971

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            KVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 972  KVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 1012



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 120/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 230

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 231 HPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PD 288

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 289 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 346

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 347 APYWLDEPKNLIL 359



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 29/213 (13%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQVPLEAPSN 407
              Y+C A+      I+ +   T++V    P N
Sbjct: 202 QTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN 234


>gi|380810884|gb|AFE77317.1| neurofascin isoform 3 precursor [Macaca mulatta]
          Length = 1158

 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 201/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 247 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 305

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 306 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 364

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 365 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 424

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 425 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 483

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 484 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 543

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 544 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 600

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 601 YLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 630



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 154/654 (23%), Positives = 254/654 (38%), Gaps = 67/654 (10%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAAPYFTVEPEFI---NAAEEETVT------FECKASGLPEPEIHWVHNG 163
              +++ +   A       P F+     A  + V        EC ASG+P P+I W   G
Sbjct: 220 KNPFTLKVLTSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKG 279

Query: 164 KPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
             +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP   
Sbjct: 280 GDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYWL 335

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDV 277
           + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D 
Sbjct: 336 DEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRDT 393

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
             +    Y C   N+ G    +  ++V +       P +  +        R +     S 
Sbjct: 394 QISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSP 453

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
             ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L 
Sbjct: 454 IPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRLE 512

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIRELI 456
           V+ P       T I  +   +       V  +    H    K+  +W + D    I   +
Sbjct: 513 VKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRM 565

Query: 457 VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII------SFVTPEGVPGTVQSL 510
             + +S T            F       G+Y    S  +      +++T  G P   + L
Sbjct: 566 KKEDDSLTI-----------FGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL 614

Query: 511 EAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
           E   L   +  L W+  +  N  +  Y ++++  +  + G   +   Y   P + ++ + 
Sbjct: 615 ELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKY---PGSVNSAVL 670

Query: 571 GLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTA 624
            L P   Y+  +    + G    S      +     P  NP +V+G G+  NN+ I+WT 
Sbjct: 671 RLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTP 730

Query: 625 MPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           M       P+ +Y + WRR  T EAWN  +V  W  S  V+   P + PYEI+V
Sbjct: 731 MNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQTPVYVPYEIRV 781



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379 YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           Y  R Q E DF +     +V        P  AP+    ++V+++    + WN V P +++
Sbjct: 777 YEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVK-VRVMNSTAISLQWNRVYPDTVQ 835

Query: 433 GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
           G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 836 GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRG 895

Query: 488 NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
           +GP SE   F TPEGVP   +             L+W  PE PNG++ GY +KY +  GT
Sbjct: 896 DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMTGYTLKYVAFNGT 955

Query: 548 KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           KVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 956 KVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 996



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 115/297 (38%), Gaps = 31/297 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T 
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTS 230

Query: 310 ITDQPE-------------DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
                E                V  G      C A   P+    I W +     D  S+ 
Sbjct: 231 ARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDK 286

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
              ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 287 AKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 343



 Score = 46.2 bits (108), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 29/206 (14%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQV 400
              Y+C A+      I+ +   T++V
Sbjct: 202 QTDYSCNARFHFTHTIQQKNPFTLKV 227


>gi|345797908|ref|XP_856076.2| PREDICTED: neurofascin isoform 5 [Canis lupus familiaris]
          Length = 1174

 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 201/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 263 TASSQMVLRGTDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 321

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 322 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 380

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 381 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 440

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 441 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 499

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 500 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 559

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 560 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 616

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 617 YLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 646



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 154/671 (22%), Positives = 257/671 (38%), Gaps = 85/671 (12%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
             ++++ + +   PY        P+  +A    E T +F                    E
Sbjct: 220 KNAFTLKV-LTNNPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGTDLLLE 278

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 279 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 335

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 336 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 394

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 395 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 452

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 453 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 511

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 512 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKL 564

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII---- 495
             +W + D    I   +  + +S T            F       G+Y    S  +    
Sbjct: 565 TVSWLKDDEPLYIGNRMKKEDDSLTI-----------FGVAERDQGSYTCVASTELDQDL 613

Query: 496 --SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
             +++T  G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   
Sbjct: 614 AKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWH 672

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDN 607
           +   +   P + ++ +  L P   Y+  +    + G    S      +     P  NP +
Sbjct: 673 DHSKF---PGSVNSAILQLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPAD 729

Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667
           V+G G+  NN+ I+WT M       P+ +Y + WRR  T E WN   V  W  S  V+  
Sbjct: 730 VKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWNNATV--W-GSRYVVGQ 786

Query: 668 QPTFQPYEIKV 678
            P + PYEI+V
Sbjct: 787 TPVYVPYEIRV 797



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 101/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP++   I+V+++    + WN V P +++
Sbjct: 793  YEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVK-IRVLNSTAISLQWNRVYPDTVQ 851

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 852  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVSRLFPYSNYKLEMVVVNGRG 911

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY +KY +  GT
Sbjct: 912  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLKYVAFNGT 971

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 972  KLGKQIVENF----SPNQTKFTMQRADPVSRYRFTLSARTQVGSG 1012



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 121/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RRK G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRKSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q   + T+K  T+
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNAFTLKVLTN 230

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 231 NPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGTDLLLECIASGVPT--PD 288

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 289 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 346

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 347 APYWLDEPKNLIL 359



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 100/251 (39%), Gaps = 47/251 (18%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELT---GGRYTILETG 270
           L+  P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRKS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
              Y+C A+          T T+Q      + FTL         V++ NP +  SLR H 
Sbjct: 202 QTDYSCNARFHF-------THTIQ----QKNAFTL--------KVLTNNPYNDSSLRNHP 242

Query: 436 RGYKVQTWTEK 446
             Y  +   E+
Sbjct: 243 DMYSARGVAER 253


>gi|332811712|ref|XP_003308755.1| PREDICTED: neurofascin isoform 1 [Pan troglodytes]
          Length = 1341

 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 354 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 412

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 413 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 471

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 472 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 531

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 532 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 590

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 591 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 650

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 651 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 707

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 708 YLTVLADQATPTN 720



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 155/666 (23%), Positives = 261/666 (39%), Gaps = 77/666 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 269 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 327

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 328 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 385

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 386 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 441

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 442 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 499

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 500 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 559

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 560 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 618

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIREL 455
            V+ P       T I  +   +       V  +    H    K+  +W + D    I   
Sbjct: 619 EVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNR 671

Query: 456 IVNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
           +  + +S T                 TE+D+ +  +K +  VLA       P + + +  
Sbjct: 672 MKKEDDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLADQAT---PTNRLAAL- 725

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
            P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   Y
Sbjct: 726 -PKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQ-FQPGVWHDHSKY 783

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRG 612
              P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G
Sbjct: 784 ---PGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEG 840

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
           +  NN+ I+WT M       P+ +Y + WRR  T EAWN  +V  W  S  V+   P + 
Sbjct: 841 TRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQTPVYV 897

Query: 673 PYEIKV 678
           PYEI+V
Sbjct: 898 PYEIRV 903



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 9/172 (5%)

Query: 421  VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
            ++W P++  S  G    Y V+ W  ++   +   + V        +   +VP      RV
Sbjct: 848  ITWTPMNATSAFGPNLRYIVK-WRRRETREAWNNVTVWGSRYVVGQTPVYVPYE---IRV 903

Query: 481  LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
             A N    GP  E +   + E +P   +             L+W  PE PNG+++GY +K
Sbjct: 904  QAENDFGKGPEPESVIGYSGEDLPSAPRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLK 963

Query: 541  YQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            Y +  GTKVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 964  YVAFNGTKVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 1011



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 159 DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 218

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 219 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 278

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK---- 305
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K    
Sbjct: 279 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 338

Query: 306 ----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
               E T     P+       V  G      C A   P+    I W +     D  S+  
Sbjct: 339 RGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 394

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 395 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 450



 Score = 47.4 bits (111), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++  
Sbjct: 137 NELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 196

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
                + D           GEY CFARNK GTA     L+ +    ++  P    E+ + 
Sbjct: 197 RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 251

Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 252 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 307

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
           D    Y+C A+      I+ +   T++V
Sbjct: 308 DMQTDYSCNARFHFTHTIQQKNPFTLKV 335


>gi|109730333|gb|AAI15737.1| NRCAM protein [Homo sapiens]
          Length = 1192

 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 147/421 (34%), Positives = 210/421 (49%), Gaps = 28/421 (6%)

Query: 24  ISASQNRHAPK-----QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPS 77
           ISA  +R  P      +   + K+E  LR   + L CI  G P P   W+K DG  + P 
Sbjct: 239 ISAKSSRERPPTFLTPEGNASNKEE--LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPK 294

Query: 78  DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINA 137
           +R    N+ K+L I HV  +D G+Y C   N +G A  ++I + V AAPY+   P+ +  
Sbjct: 295 NRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALG-AIHHTISVRVKAAPYWITAPQNLVL 353

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  E  T  C+A+G P+P I W+ NG PI  AP +P RK+  + I   N+++  +  Y C
Sbjct: 354 SPGEDGTLICRANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQC 413

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQ 256
           NA+N  GY+  + +VNVLA  P I       Y V   +  +L C  FG+P P + W    
Sbjct: 414 NASNEYGYLLANAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGA 473

Query: 257 K--ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
           K   L    Y + E G L+I       +G YTC ARNKLG A+    L +K+ T I  QP
Sbjct: 474 KGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDATWIVKQP 533

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           E   V+ G   +F C    D +L L+++WL+ +   +  S+ RF    D+ L V   S+ 
Sbjct: 534 EYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNR--ELPSDERFTVDKDH-LVVADVSDD 590

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPS----------NFTLIQVIDAKKAVVSWN 424
           DSG YTC A T LD + A A L+V  P   P+          +  L   +D K   +SW 
Sbjct: 591 DSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWT 649

Query: 425 P 425
           P
Sbjct: 650 P 650



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 164/640 (25%), Positives = 258/640 (40%), Gaps = 66/640 (10%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTC--EVSNGVGEAKSYSIDLSVLAA------PYF 128
           S+R+SQG  G       +    +  Y C    ++     +   I + V++A      P  
Sbjct: 191 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISAKSSRERPPT 250

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---R 181
            + PE   + +EE     ++ EC A GLP P I+W    K     P N  R V  N    
Sbjct: 251 FLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKT 305

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR 241
           + I ++ ++D+GNY C A N+LG ++  + V V A AP    AP++     G+   L CR
Sbjct: 306 LQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICR 364

Query: 242 VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQG 298
             G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    
Sbjct: 365 ANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLA 424

Query: 299 SGSLTVKEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           +  + V         P +  Y+V A + A   C     P    +I W +G++      E 
Sbjct: 425 NAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-ED 481

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDA 416
            +V   + +L +  + +  +G YTC A+ +L   + +  L ++       + T I     
Sbjct: 482 IYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIK-------DATWIVKQPE 534

Query: 417 KKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
              V   + VS +    H     +     KD     REL  +  E  T + D  V A  +
Sbjct: 535 YAVVQRGSMVSFECKVKHDHTLSLTVLWLKDN----RELPSD--ERFTVDKDHLVVADVS 588

Query: 477 FARVLAFNGAYNG-----PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKW 524
                 +    N        S ++S V P   P  V  +   P           +  L W
Sbjct: 589 DDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSW 648

Query: 525 VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAG 584
              +  N  +  + I+Y+        P L         T T+A+L  L P   Y   +  
Sbjct: 649 TPGDDNNSPITKFIIEYEDAMHK---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMA 704

Query: 585 YTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
               G      A  +YL     P KNP  VEG GS P+NLVI+W  +   E N P  +Y+
Sbjct: 705 VNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYK 764

Query: 639 IFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           + WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 765 VSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 802



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 825  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 883

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 884  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 943

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 944  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 999

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1000 NFSTRYKFYFYAQTSAGSGSQ 1020



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 138/605 (22%), Positives = 226/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 361 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 416

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 417 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 474

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +   A  I + 
Sbjct: 475 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDATWIVKQ 532

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 533 PEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDS 592

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 593 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 647

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 648 WTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 707

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 708 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 766

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 767 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDMGFAPEPAVVMGHSGE 823

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 824 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 883

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 884 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 936

Query: 616 NNLVI 620
           ++L I
Sbjct: 937 SSLKI 941



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 124/301 (41%), Gaps = 40/301 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 EHTHIT--DQPEDYEVEAGQSAT---FRCNAVSDPSLKLS-----IVWLR--GSEPIDFE 353
             +  +  ++P  +    G ++     R N +S   +        I W +  G  P +  
Sbjct: 238 VISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKN-- 295

Query: 354 SEPRFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFT 409
              R V  N + +L +   SE DSG Y C A+  L  I    ++ V+     + AP N  
Sbjct: 296 ---RTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLV 352

Query: 410 L 410
           L
Sbjct: 353 L 353



 Score = 40.0 bits (92), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWI 253
           + C   ++L        +  L   P IT+    +Y +D +  +V+ C   G P P  +W 
Sbjct: 22  FLCQMISALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWT 81

Query: 254 HNQKELTGGRYTILE----TGDLKITDVAFADS----GEYTCFARNKLGTAQGSGSLTVK 305
            N       +  ++     TG L I  ++   +    G Y C ARN+ G A  +  +   
Sbjct: 82  RNGTHFDIDKDPLVTMKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRP 141

Query: 306 EHTHI--TDQPEDYEVEAGQSATFRC 329
             + +   ++ E   +++GQS    C
Sbjct: 142 SRSPLWTKEKLEPITLQSGQSLVLPC 167


>gi|355558859|gb|EHH15639.1| hypothetical protein EGK_01754 [Macaca mulatta]
          Length = 1345

 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 252 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 310

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 311 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 369

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 370 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 429

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 430 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 488

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 489 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 548

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 549 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 605

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 606 YLTVLADQATPTN 618



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 155/666 (23%), Positives = 261/666 (39%), Gaps = 77/666 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 167 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 225

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 226 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 283

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 284 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 339

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 340 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 397

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 398 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 457

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 458 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 516

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIREL 455
            V+ P       T I  +   +       V  +    H    K+  +W + D    I   
Sbjct: 517 EVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNR 569

Query: 456 IVNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
           +  + +S T                 TE+D+ +  +K +  VLA       P + + +  
Sbjct: 570 MKKEDDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLADQAT---PTNRLAAL- 623

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
            P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   Y
Sbjct: 624 -PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKY 681

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRG 612
              P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G
Sbjct: 682 ---PGSVNSAVLRLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPGDVKGEG 738

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
           +  NN+ I+WT M       P+ +Y + WRR  T EAWN  +V  W  S  V+   P + 
Sbjct: 739 TRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQTPVYV 795

Query: 673 PYEIKV 678
           PYEI+V
Sbjct: 796 PYEIRV 801



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     +V        P  AP+    ++V+++    + WN V P +++
Sbjct: 797  YEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVK-VRVMNSTAISLQWNRVYPDTVQ 855

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 856  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRG 915

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG++ GY +KY +  GT
Sbjct: 916  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMTGYTLKYVAFNGT 975

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            KVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 976  KVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 1016



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 57  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 116

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 117 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 176

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK---- 305
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K    
Sbjct: 177 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 236

Query: 306 ----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
               E T     P+       V  G      C A   P+    I W +     D  S+  
Sbjct: 237 RGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 292

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 293 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 348



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 84/206 (40%), Gaps = 29/206 (14%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           +   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 37  VTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 96

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 97  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 151

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 152 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 207

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQV 400
              Y+C A+      I+ +   T++V
Sbjct: 208 QTDYSCNARFHFTHTIQQKNPFTLKV 233


>gi|297662214|ref|XP_002809609.1| PREDICTED: neurofascin [Pongo abelii]
          Length = 1342

 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 354 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 412

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 413 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 471

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 472 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 531

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 532 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 590

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 591 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 650

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 651 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 707

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 708 YLTVLADQATPTN 720



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 155/666 (23%), Positives = 261/666 (39%), Gaps = 77/666 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 269 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 327

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 328 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 385

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 386 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 441

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 442 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 499

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 500 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 559

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 560 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 618

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIREL 455
            V+ P       T I  +   +       V  +    H    K+  +W + D    I   
Sbjct: 619 EVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNR 671

Query: 456 IVNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
           +  + +S T                 TE+D+ +  +K +  VLA       P + + +  
Sbjct: 672 MKKEDDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLADQAT---PTNRLAAL- 725

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
            P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   Y
Sbjct: 726 -PKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQ-FQPGVWHDHSKY 783

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRG 612
              P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G
Sbjct: 784 ---PGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEG 840

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
           +  NN+ I+WT M       P+ +Y + WRR  T EAWN  +V  W  S  V+   P + 
Sbjct: 841 TRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQTPVYV 897

Query: 673 PYEIKV 678
           PYEI+V
Sbjct: 898 PYEIRV 903



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 9/172 (5%)

Query: 421  VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
            ++W P++  S  G    Y V+ W  ++   +   + V        +   +VP      RV
Sbjct: 848  ITWTPMNATSAFGPNLRYIVK-WRRRETREAWNNVTVWGSRYVVGQTPVYVPYE---IRV 903

Query: 481  LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
             A N    GP  E +   + E +P   +             L+W  PE PNG+++GY +K
Sbjct: 904  QAENDFGKGPEPESVIGYSGEDLPSAPRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLK 963

Query: 541  YQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            Y +  GTKVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 964  YVAFNGTKVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 1011



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 159 DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 218

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 219 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 278

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK---- 305
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K    
Sbjct: 279 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 338

Query: 306 ----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
               E T     P+       V  G      C A   P+    I W +     D  S+  
Sbjct: 339 RGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 394

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 395 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 450



 Score = 47.4 bits (111), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++  
Sbjct: 137 NELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 196

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
                + D           GEY CFARNK GTA     L+ +    ++  P    E+ + 
Sbjct: 197 RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 251

Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 252 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 307

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
           D    Y+C A+      I+ +   T++V
Sbjct: 308 DMQTDYSCNARFHFTHTIQQKNPFTLKV 335


>gi|426357543|ref|XP_004046097.1| PREDICTED: neuronal cell adhesion molecule-like [Gorilla gorilla
           gorilla]
          Length = 1103

 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 148/421 (35%), Positives = 210/421 (49%), Gaps = 28/421 (6%)

Query: 24  ISASQNRHAPK-----QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPS 77
           ISA  +R  P      +   + K+E  LR   + L CI  G P P   W+K DG  + P 
Sbjct: 239 ISAKSSRERPPTFLTPEGNASNKEE--LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPK 294

Query: 78  DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINA 137
           +R    N+ K+L I HV  +D G+Y C   N +G A  ++I + V AAPY+   P+ +  
Sbjct: 295 NRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALG-AIHHTISVRVKAAPYWITAPQNLVL 353

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  E  T  C+A+G P+P I W+ NG PI  AP +P RK+  + I   N+++  +  Y C
Sbjct: 354 SPGEDGTLICRANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQC 413

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQ 256
           NA+N  GY+  + +VNVLA  P I       Y V   +  +L C  FG+P P V W    
Sbjct: 414 NASNEYGYLLANAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTVEWFKGA 473

Query: 257 K--ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
           K   L    Y + E G L+I       +G YTC ARNKLG A+    L +K+ T I  QP
Sbjct: 474 KGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQP 533

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           E   V+ G   +F C    D +L L+++WL+ +   +  S+ RF    D+ L V   S+ 
Sbjct: 534 EYAVVQRGSMVSFECKVKHDHTLTLTVLWLKDNR--ELPSDERFTVDKDH-LVVADVSDD 590

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPS----------NFTLIQVIDAKKAVVSWN 424
           DSG YTC A T LD + A A L+V  P   P+          +  L   +D K   +SW 
Sbjct: 591 DSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWT 649

Query: 425 P 425
           P
Sbjct: 650 P 650



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 162/642 (25%), Positives = 263/642 (40%), Gaps = 70/642 (10%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTC--EVSNGVGEAKSYSIDLSVLAA------PYF 128
           S+R+SQG  G       +    +  Y C    ++     +   I + V++A      P  
Sbjct: 191 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISAKSSRERPPT 250

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---R 181
            + PE   + +EE     ++ EC A GLP P I+W    K     P N  R V  N    
Sbjct: 251 FLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKT 305

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR 241
           + I ++ ++D+GNY C A N+LG ++  + V V A AP    AP++     G+   L CR
Sbjct: 306 LQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICR 364

Query: 242 VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQG 298
             G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    
Sbjct: 365 ANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLA 424

Query: 299 SGSLTVKEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           +  + V         P +  Y+V A + A   C     P    ++ W +G++      E 
Sbjct: 425 NAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSP--LPTVEWFKGAKGSALH-ED 481

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP--LEAPSNFTLIQVI 414
            +V   + +L +  + +  +G YTC A+ +L   + +  L ++ P  +     + ++Q  
Sbjct: 482 IYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQ-- 539

Query: 415 DAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
             + ++VS+     +    H     +     KD     REL  +  E  T + D  V A 
Sbjct: 540 --RGSMVSF-----ECKVKHDHTLTLTVLWLKDN----RELPSD--ERFTVDKDHLVVAD 586

Query: 475 KNFARVLAFNGAYNG-----PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYL 522
            +      +    N        S ++S V P   P  V  +   P           +  L
Sbjct: 587 VSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQL 646

Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
            W   +  N  +  + I+Y+        P L         T T+A+L  L P   Y   +
Sbjct: 647 SWTPGDDNNSPITKFIIEYEDAMHE---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRV 702

Query: 583 AGYTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
                 G      A  +YL     P KNP  VEG GS P+NLVI+W  +   E N P  +
Sbjct: 703 MAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQ 762

Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           Y++ WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 763 YKVSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 802



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 825  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 883

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 884  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 943

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 944  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 999

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1000 NFSTRYKFYFYAQTSAGSGSQ 1020



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 136/605 (22%), Positives = 225/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 361 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 416

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P + W    K 
Sbjct: 417 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTVEWFKGAK- 474

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 475 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIVKQ 532

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 533 PEYAVVQRGSMVSFECKVKHDHTLTLTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDS 592

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 593 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 647

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 648 WTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 707

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 708 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 766

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 767 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDMGFAPEPAVVMGHSGE 823

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 824 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 883

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 884 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 936

Query: 616 NNLVI 620
           ++L I
Sbjct: 937 SSLKI 941



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 124/301 (41%), Gaps = 40/301 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 EHTHIT--DQPEDYEVEAGQSAT---FRCNAVSDPSLKLS-----IVWLR--GSEPIDFE 353
             +  +  ++P  +    G ++     R N +S   +        I W +  G  P +  
Sbjct: 238 VISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKN-- 295

Query: 354 SEPRFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFT 409
              R V  N + +L +   SE DSG Y C A+  L  I    ++ V+     + AP N  
Sbjct: 296 ---RTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLV 352

Query: 410 L 410
           L
Sbjct: 353 L 353



 Score = 40.0 bits (92), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWI 253
           + C   ++L        +  L   P IT+    +Y +D +  +V+ C   G P P  +W 
Sbjct: 22  FLCQMISALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWT 81

Query: 254 HNQKELTGGRYTILE----TGDLKITDVAFADS----GEYTCFARNKLGTAQGSGSLTVK 305
            N       +  ++     TG L I  ++   +    G Y C ARN+ G A  +  +   
Sbjct: 82  RNGTHFDIDKDPLVTMKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRP 141

Query: 306 EHTHI--TDQPEDYEVEAGQSATFRC 329
             + +   ++ E   +++GQS    C
Sbjct: 142 SRSPLWTKEKLEPITLQSGQSLVLPC 167


>gi|168278575|dbj|BAG11167.1| neuronal cell adhesion molecule precursor [synthetic construct]
          Length = 1180

 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 147/421 (34%), Positives = 210/421 (49%), Gaps = 28/421 (6%)

Query: 24  ISASQNRHAPK-----QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPS 77
           ISA  +R  P      +   + K+E  LR   + L CI  G P P   W+K DG  + P 
Sbjct: 239 ISAKSSRERPPTFLTPEGNASNKEE--LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPK 294

Query: 78  DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINA 137
           +R    N+ K+L I HV  +D G+Y C   N +G A  ++I + V AAPY+   P+ +  
Sbjct: 295 NRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALG-AIHHTISVRVKAAPYWITAPQNLVL 353

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  E  T  C+A+G P+P I W+ NG PI  AP +P RK+  + I   N+++  +  Y C
Sbjct: 354 SPGEDGTLICRANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQC 413

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQ 256
           NA+N  GY+  + +VNVLA  P I       Y V   +  +L C  FG+P P + W    
Sbjct: 414 NASNEYGYLLANAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGA 473

Query: 257 K--ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
           K   L    Y + E G L+I       +G YTC ARNKLG A+    L +K+ T I  QP
Sbjct: 474 KGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDATWIVKQP 533

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           E   V+ G   +F C    D +L L+++WL+ +   +  S+ RF    D+ L V   S+ 
Sbjct: 534 EYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNR--ELPSDERFTVDKDH-LVVADVSDD 590

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPS----------NFTLIQVIDAKKAVVSWN 424
           DSG YTC A T LD + A A L+V  P   P+          +  L   +D K   +SW 
Sbjct: 591 DSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWT 649

Query: 425 P 425
           P
Sbjct: 650 P 650



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 164/640 (25%), Positives = 258/640 (40%), Gaps = 66/640 (10%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTC--EVSNGVGEAKSYSIDLSVLAA------PYF 128
           S+R+SQG  G       +    +  Y C    ++     +   I + V++A      P  
Sbjct: 191 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISAKSSRERPPT 250

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---R 181
            + PE   + +EE     ++ EC A GLP P I+W    K     P N  R V  N    
Sbjct: 251 FLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKT 305

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR 241
           + I ++ ++D+GNY C A N+LG ++  + V V A AP    AP++     G+   L CR
Sbjct: 306 LQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICR 364

Query: 242 VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQG 298
             G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    
Sbjct: 365 ANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLA 424

Query: 299 SGSLTVKEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           +  + V         P +  Y+V A + A   C     P    +I W +G++      E 
Sbjct: 425 NAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-ED 481

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDA 416
            +V   + +L +  + +  +G YTC A+ +L   + +  L ++       + T I     
Sbjct: 482 IYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIK-------DATWIVKQPE 534

Query: 417 KKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
              V   + VS +    H     +     KD     REL  +  E  T + D  V A  +
Sbjct: 535 YAVVQRGSMVSFECKVKHDHTLSLTVLWLKDN----RELPSD--ERFTVDKDHLVVADVS 588

Query: 477 FARVLAFNGAYNG-----PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKW 524
                 +    N        S ++S V P   P  V  +   P           +  L W
Sbjct: 589 DDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSW 648

Query: 525 VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAG 584
              +  N  +  + I+Y+        P L         T T+A+L  L P   Y   +  
Sbjct: 649 TPGDDNNSPITKFIIEYEDAMHK---PGLWHHQTEVSGTQTTAQL-NLSPYVNYSFRVMA 704

Query: 585 YTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
               G      A  +YL     P KNP  VEG GS P+NLVI+W  +   E N P  +Y+
Sbjct: 705 VNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYK 764

Query: 639 IFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           + WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 765 VSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 802



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 825  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 883

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 884  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 943

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 944  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 999

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1000 NFSTRYKFYFYAQTSAGSGSQ 1020



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 138/605 (22%), Positives = 226/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 361 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 416

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 417 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 474

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +   A  I + 
Sbjct: 475 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDATWIVKQ 532

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 533 PEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDS 592

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 593 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 647

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 648 WTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLNLSPYVNYSFRVMAVNS 707

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 708 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 766

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 767 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDMGFAPEPAVVMGHSGE 823

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 824 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 883

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 884 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 936

Query: 616 NNLVI 620
           ++L I
Sbjct: 937 SSLKI 941



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 122/301 (40%), Gaps = 40/301 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 --EHTHITDQPEDYEVEAGQSAT---FRCNAVSDPSLKLS-----IVWLR--GSEPIDFE 353
                   ++P  +    G ++     R N +S   +        I W +  G  P +  
Sbjct: 238 VISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKN-- 295

Query: 354 SEPRFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFT 409
              R V  N + +L +   SE DSG Y C A+  L  I    ++ V+     + AP N  
Sbjct: 296 ---RTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLV 352

Query: 410 L 410
           L
Sbjct: 353 L 353



 Score = 40.0 bits (92), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWI 253
           + C   ++L        +  L   P IT+    +Y +D +  +V+ C   G P P  +W 
Sbjct: 22  FLCQMISALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWT 81

Query: 254 HNQKELTGGRYTILE----TGDLKITDVAFADS----GEYTCFARNKLGTAQGSGSLTVK 305
            N       +  ++     TG L I  ++   +    G Y C ARN+ G A  +  +   
Sbjct: 82  RNGTHFDIDKDPLVTMKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRP 141

Query: 306 EHTHI--TDQPEDYEVEAGQSATFRC 329
             + +   ++ E   +++GQS    C
Sbjct: 142 SRSPLWTKEKLEPITLQSGQSLVLPC 167


>gi|355782631|gb|EHH64552.1| hypothetical protein EGM_17797 [Macaca fascicularis]
          Length = 1345

 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 252 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 310

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 311 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 369

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 370 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 429

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 430 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 488

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 489 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 548

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 549 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 605

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 606 YLTVLADQATPTN 618



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 155/666 (23%), Positives = 261/666 (39%), Gaps = 77/666 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 167 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 225

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 226 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 283

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 284 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 339

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 340 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 397

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 398 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 457

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 458 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 516

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIREL 455
            V+ P       T I  +   +       V  +    H    K+  +W + D    I   
Sbjct: 517 EVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNR 569

Query: 456 IVNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
           +  + +S T                 TE+D+ +  +K +  VLA       P + + +  
Sbjct: 570 MKKEDDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLADQAT---PTNRLAAL- 623

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
            P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   Y
Sbjct: 624 -PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKY 681

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRG 612
              P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G
Sbjct: 682 ---PGSVNSAVLRLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPGDVKGEG 738

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
           +  NN+ I+WT M       P+ +Y + WRR  T EAWN  +V  W  S  V+   P + 
Sbjct: 739 TRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQTPVYV 795

Query: 673 PYEIKV 678
           PYEI+V
Sbjct: 796 PYEIRV 801



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     +V        P  AP+    ++V+++    + WN V P +++
Sbjct: 797  YEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVK-VRVMNSTAISLQWNRVYPDTVQ 855

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 856  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRG 915

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG++ GY +KY +  GT
Sbjct: 916  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMTGYTLKYVAFNGT 975

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            KVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 976  KVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 1016



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 57  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 116

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 117 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 176

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK---- 305
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K    
Sbjct: 177 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 236

Query: 306 ----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
               E T     P+       V  G      C A   P+    I W +     D  S+  
Sbjct: 237 RGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 292

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 293 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 348



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 84/206 (40%), Gaps = 29/206 (14%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           +   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 37  VTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 96

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 97  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 151

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 152 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 207

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQV 400
              Y+C A+      I+ +   T++V
Sbjct: 208 QTDYSCNARFHFTHTIQQKNPFTLKV 233


>gi|149058629|gb|EDM09786.1| neurofascin, isoform CRA_b [Rattus norvegicus]
          Length = 1200

 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 192/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 279 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 337

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 338 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 396

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 397 WLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 456

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 457 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 515

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 516 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 575

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 576 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKA 632

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 633 YLTVLADQATPTN 645



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 158/682 (23%), Positives = 264/682 (38%), Gaps = 92/682 (13%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 177 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 235

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 236 KNPFTLKV-LTNNPYNDSSLRNHPDIYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLE 294

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 295 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 351

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N   L      
Sbjct: 352 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWLVNGDPLQSAPPN 410

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 411 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 468

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 469 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 527

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 528 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKL 580

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTT-----------------TEVDKFVPASKNFARVLA 482
             +W + D    I   +  + +S T                 TE+D+ +  +K +  VLA
Sbjct: 581 TVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQDL--AKAYLTVLA 638

Query: 483 FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
                  P + + +   P+G P   + LE   L   +  L W+  +  N  +  Y ++++
Sbjct: 639 DQAT---PTNRLAAL--PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFE 693

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KY 596
             +  + G   +   +   P + ++ +  L P   Y+  +    + G    S      + 
Sbjct: 694 EDQ-FQPGVWHDHSKF---PGSVNSAVLHLSPYVNYQFRVIAVNEVGSSHPSLPSERYRT 749

Query: 597 LFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVL 656
               P  NP +V+G G+  NN+ I+WT M       P+ +Y + WRR  T E WN  +V 
Sbjct: 750 SGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVT 807

Query: 657 DWRQSELVLANQPTFQPYEIKV 678
            W  S  V+   P + PYEI+V
Sbjct: 808 VW-GSRYVVGQTPVYVPYEIRV 828



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP+    I+V+++    + WN V   +++
Sbjct: 824  YEIRVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVK-IRVLNSTAISLQWNRVYSDTVQ 882

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 883  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVGRLFPYSNYKLEMVVVNGRG 942

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY ++Y    GT
Sbjct: 943  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLRYVPFNGT 1002

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 1003 KLGKQMVENF----SPNQTKFSVQRADPVSRYRFSLSARTQVGSG 1043



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 122/320 (38%), Gaps = 47/320 (14%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 67  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 126

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 127 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 186

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 187 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 246

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 247 NPYNDSSLRNHPDIYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PD 304

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 305 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 362

Query: 401 P---LEAPSNFTLIQVIDAK 417
               L+ P N  L    D +
Sbjct: 363 APYWLDEPKNLILAPGEDGR 382



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 99/251 (39%), Gaps = 47/251 (18%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELT---GGRYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 47  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 106

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 107 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 161

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 162 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 217

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
              Y+C A+          T T+Q      + FTL         V++ NP +  SLR H 
Sbjct: 218 QTDYSCNARFHF-------THTIQ----QKNPFTL--------KVLTNNPYNDSSLRNHP 258

Query: 436 RGYKVQTWTEK 446
             Y  +   E+
Sbjct: 259 DIYSARGVAER 269


>gi|426333438|ref|XP_004028284.1| PREDICTED: neurofascin isoform 1 [Gorilla gorilla gorilla]
          Length = 1341

 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 354 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 412

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 413 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 471

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 472 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 531

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 532 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 590

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 591 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 650

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 651 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 707

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 708 YLTVLADQATPTN 720



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 155/666 (23%), Positives = 261/666 (39%), Gaps = 77/666 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 269 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 327

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 328 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 385

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 386 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 441

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 442 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 499

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 500 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 559

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 560 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 618

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIREL 455
            V+ P       T I  +   +       V  +    H    K+  +W + D    I   
Sbjct: 619 EVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNR 671

Query: 456 IVNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
           +  + +S T                 TE+D+ +  +K +  VLA       P + + +  
Sbjct: 672 MKKEDDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLADQAT---PTNRLAAL- 725

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
            P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   Y
Sbjct: 726 -PKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQ-FQPGVWHDHSKY 783

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRG 612
              P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G
Sbjct: 784 ---PGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEG 840

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
           +  NN+ I+WT M       P+ +Y + WRR  T EAWN  +V  W  S  V+   P + 
Sbjct: 841 TRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQTPVYV 897

Query: 673 PYEIKV 678
           PYEI+V
Sbjct: 898 PYEIRV 903



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 9/172 (5%)

Query: 421  VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
            ++W P++  S  G    Y V+ W  ++   +   + V        +   +VP      RV
Sbjct: 848  ITWTPMNATSAFGPNLRYIVK-WRRRETREAWNNVTVWGSRYVVGQTPVYVPYE---IRV 903

Query: 481  LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
             A N    GP  E +   + E +P   +             L+W  PE PNG+++GY +K
Sbjct: 904  QAENDFGKGPEPESVIGYSGEDLPSAPRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLK 963

Query: 541  YQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            Y +  GTKVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 964  YVAFNGTKVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 1011



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 159 DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 218

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 219 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 278

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK---- 305
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K    
Sbjct: 279 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 338

Query: 306 ----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
               E T     P+       V  G      C A   P+    I W +     D  S+  
Sbjct: 339 RGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 394

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 395 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 450



 Score = 47.4 bits (111), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++  
Sbjct: 137 NELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 196

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
                + D           GEY CFARNK GTA     L+ +    ++  P    E+ + 
Sbjct: 197 RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 251

Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 252 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 307

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
           D    Y+C A+      I+ +   T++V
Sbjct: 308 DMQTDYSCNARFHFTHTIQQKNPFTLKV 335


>gi|83304988|sp|O94856.4|NFASC_HUMAN RecName: Full=Neurofascin; Flags: Precursor
          Length = 1347

 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 192/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 252 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 310

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 311 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 369

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 370 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 429

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 430 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 488

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED     G +    C    D
Sbjct: 489 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHD 548

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 549 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 605

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 606 YLTVLADQATPTN 618



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 155/666 (23%), Positives = 261/666 (39%), Gaps = 77/666 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 167 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 225

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 226 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 283

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 284 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 339

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 340 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 397

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 398 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 457

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 458 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 516

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIREL 455
            V+ P       T I  +   +       V  +    H    K+  +W + D    I   
Sbjct: 517 EVKDP-------TRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNR 569

Query: 456 IVNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
           +  + +S T                 TE+D+ +  +K +  VLA       P + + +  
Sbjct: 570 MKKEDDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLADQAT---PTNRLAAL- 623

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
            P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   Y
Sbjct: 624 -PKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQ-FQPGVWHDHSKY 681

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRG 612
              P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G
Sbjct: 682 ---PGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEG 738

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
           +  NN+ I+WT M       P+ +Y + WRR  T EAWN  +V  W  S  V+   P + 
Sbjct: 739 TRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQTPVYV 795

Query: 673 PYEIKV 678
           PYEI+V
Sbjct: 796 PYEIRV 801



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     +V        P  AP+    ++V+++    + WN V   +++
Sbjct: 797  YEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVK-VRVMNSTAISLQWNRVYSDTVQ 855

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 856  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRG 915

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+++GY +KY +  GT
Sbjct: 916  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLKYVAFNGT 975

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            KVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 976  KVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 1016



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 57  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 116

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 117 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 176

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK---- 305
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K    
Sbjct: 177 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 236

Query: 306 ----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
               E T     P+       V  G      C A   P+    I W +     D  S+  
Sbjct: 237 RGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 292

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 293 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 348



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++  
Sbjct: 35  NELTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 94

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
                + D           GEY CFARNK GTA     L+ +    ++  P    E+ + 
Sbjct: 95  RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 149

Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 150 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 205

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
           D    Y+C A+      I+ +   T++V
Sbjct: 206 DMQTDYSCNARFHFTHTIQQKNPFTLKV 233


>gi|410986307|ref|XP_003999452.1| PREDICTED: neurofascin isoform 4 [Felis catus]
          Length = 1190

 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 264 TASSQMVLRGMDLVLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 322

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 323 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 381

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 382 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 441

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 442 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 500

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 501 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 560

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 561 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 617

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 618 YLTVLADQATPTN 630



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 158/682 (23%), Positives = 266/682 (39%), Gaps = 92/682 (13%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 162 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 220

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
             ++++ + +   PY        P+  +A    E T +F                    E
Sbjct: 221 KNAFTLKV-LTNNPYNDSSLRNHPDIYSARGVAERTPSFMYPQGTASSQMVLRGMDLVLE 279

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 280 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 336

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 337 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 395

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 396 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 453

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 454 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 512

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 513 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKL 565

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTT-----------------TEVDKFVPASKNFARVLA 482
             +W + D    I   +  + +S T                 TE+D+ +  +K +  VLA
Sbjct: 566 TVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLA 623

Query: 483 FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
                  P + + +   P+G P   + LE   L   +  L W+  +  N  +  Y ++++
Sbjct: 624 DQAT---PTNRLAAL--PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFE 678

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KY 596
             +  + G   +   +   P + ++ +  L P   Y+  +    + G    S      + 
Sbjct: 679 EDQ-FQPGVWHDHSKF---PGSVNSAVLQLSPYVNYQFRVIAINEVGSSHPSLPSERYRT 734

Query: 597 LFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVL 656
               P  NP +V+G G+  NN+ I+WT M       P+ +Y + WRR  T E WN  +V 
Sbjct: 735 SGAPPESNPADVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVT 792

Query: 657 DWRQSELVLANQPTFQPYEIKV 678
            W  S  V+   P + PYEI+V
Sbjct: 793 VW-GSRYVVGQTPVYVPYEIRV 813



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 101/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP++   I+V+++    + WN V P +++
Sbjct: 809  YEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVK-IRVLNSTAISLQWNRVYPDTVQ 867

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     S+     R+     G+     V +  P S     ++  NG  
Sbjct: 868  GQLREYRAYYWRESSLLKSLWVSQKRQQASFPGDRPRGVVSRLFPYSNYKLEMVVVNGRG 927

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY +KY +  GT
Sbjct: 928  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLKYVAFNGT 987

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 988  KLGKQIVENF----SPNQTKFTMQRADPVSRYRFTLSARTQVGSG 1028



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 121/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 52  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 111

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 112 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 171

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q   + T+K  T+
Sbjct: 172 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNAFTLKVLTN 231

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 232 NPYNDSSLRNHPDIYSARGVAERTPSFMYPQGTASSQMVLRGMDLVLECIASGVPT--PD 289

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 290 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 347

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 348 APYWLDEPKNLIL 360



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 100/251 (39%), Gaps = 47/251 (18%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L+  P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 32  LSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 91

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 92  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 146

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 147 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 202

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
              Y+C A+          T T+Q      + FTL         V++ NP +  SLR H 
Sbjct: 203 QTDYSCNARFHF-------THTIQ----QKNAFTL--------KVLTNNPYNDSSLRNHP 243

Query: 436 RGYKVQTWTEK 446
             Y  +   E+
Sbjct: 244 DIYSARGVAER 254


>gi|410986303|ref|XP_003999450.1| PREDICTED: neurofascin isoform 2 [Felis catus]
          Length = 1244

 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 253 TASSQMVLRGMDLVLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 311

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 312 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 370

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 371 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 430

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 431 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 489

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 490 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 549

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 550 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 606

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 607 YLTVLADQATPTN 619



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 153/666 (22%), Positives = 261/666 (39%), Gaps = 77/666 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 168 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 226

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
             ++++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 227 KNAFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LVLECIASGVPTPDIAWYKK 284

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 285 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 340

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 341 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 398

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 399 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 458

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 459 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 517

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIREL 455
            V+ P       T I  +   +       V  +    H    K+  +W + D    I   
Sbjct: 518 EVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNR 570

Query: 456 IVNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
           +  + +S T                 TE+D+ +  +K +  VLA       P + + +  
Sbjct: 571 MKKEDDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLADQAT---PTNRLAAL- 624

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
            P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   +
Sbjct: 625 -PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKF 682

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRG 612
              P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G
Sbjct: 683 ---PGSVNSAVLQLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEG 739

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
           +  NN+ I+WT M       P+ +Y + WRR  T E WN  +V  W  S  V+   P + 
Sbjct: 740 TRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQTPVYV 796

Query: 673 PYEIKV 678
           PYEI+V
Sbjct: 797 PYEIRV 802



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 118/296 (39%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 58  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 117

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 118 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 177

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK---- 305
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q   + T+K    
Sbjct: 178 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNAFTLKVLTT 237

Query: 306 ----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
               E T     P+       V  G      C A   P+    I W +     D  S+  
Sbjct: 238 RGVAERTPSFMYPQGTASSQMVLRGMDLVLECIASGVPT--PDIAWYKKGG--DLPSDKA 293

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 294 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 349



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 9/172 (5%)

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           ++W P++  S  G    Y V+ W  ++   +   + V        +   +VP      RV
Sbjct: 747 ITWTPMNATSAFGPNLRYIVK-WRRRETRETWNNVTVWGSRYVVGQTPVYVPYE---IRV 802

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
            A N    GP  + +   + E +P   +             L+W  PE PNG+L+GY +K
Sbjct: 803 QAENDFGKGPEPDTVIGYSGEDLPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLK 862

Query: 541 YQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           Y +  GTK+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 863 YVAFNGTKLGKQIVENF----SPNQTKFTMQRADPVSRYRFTLSARTQVGSG 910



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 86/208 (41%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L+  P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++  
Sbjct: 36  NELSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 95

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
                + D           GEY CFARNK GTA     L+ +    ++  P    E+ + 
Sbjct: 96  RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 150

Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 151 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 206

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
           D    Y+C A+      I+ +   T++V
Sbjct: 207 DMQTDYSCNARFHFTHTIQQKNAFTLKV 234


>gi|345797906|ref|XP_545682.3| PREDICTED: neurofascin isoform 1 [Canis lupus familiaris]
          Length = 1189

 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 263 TASSQMVLRGTDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 321

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 322 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 380

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 381 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 440

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 441 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 499

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 500 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 559

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 560 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 616

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 617 YLTVLADQATPTN 629



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 158/682 (23%), Positives = 265/682 (38%), Gaps = 92/682 (13%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
             ++++ + +   PY        P+  +A    E T +F                    E
Sbjct: 220 KNAFTLKV-LTNNPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGTDLLLE 278

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 279 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 335

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 336 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 394

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 395 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 452

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 453 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 511

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 512 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKL 564

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTT-----------------TEVDKFVPASKNFARVLA 482
             +W + D    I   +  + +S T                 TE+D+ +  +K +  VLA
Sbjct: 565 TVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLA 622

Query: 483 FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
                  P + + +   P+G P   + LE   L   +  L W+  +  N  +  Y ++++
Sbjct: 623 DQAT---PTNRLAAL--PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFE 677

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KY 596
             +  + G   +   +   P + ++ +  L P   Y+  +    + G    S      + 
Sbjct: 678 EDQ-FQPGVWHDHSKF---PGSVNSAILQLSPYVNYQFRVIAINEVGSSHPSLPSERYRT 733

Query: 597 LFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVL 656
               P  NP +V+G G+  NN+ I+WT M       P+ +Y + WRR  T E WN   V 
Sbjct: 734 SGAPPESNPADVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWNNATV- 792

Query: 657 DWRQSELVLANQPTFQPYEIKV 678
            W  S  V+   P + PYEI+V
Sbjct: 793 -W-GSRYVVGQTPVYVPYEIRV 812



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 101/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP++   I+V+++    + WN V P +++
Sbjct: 808  YEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVK-IRVLNSTAISLQWNRVYPDTVQ 866

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 867  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVSRLFPYSNYKLEMVVVNGRG 926

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY +KY +  GT
Sbjct: 927  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLKYVAFNGT 986

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 987  KLGKQIVENF----SPNQTKFTMQRADPVSRYRFTLSARTQVGSG 1027



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 121/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RRK G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRKSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q   + T+K  T+
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNAFTLKVLTN 230

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 231 NPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGTDLLLECIASGVPT--PD 288

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 289 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 346

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 347 APYWLDEPKNLIL 359



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 100/251 (39%), Gaps = 47/251 (18%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L+  P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRKS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
              Y+C A+          T T+Q      + FTL         V++ NP +  SLR H 
Sbjct: 202 QTDYSCNARFHF-------THTIQ----QKNAFTL--------KVLTNNPYNDSSLRNHP 242

Query: 436 RGYKVQTWTEK 446
             Y  +   E+
Sbjct: 243 DMYSARGVAER 253


>gi|403294840|ref|XP_003938371.1| PREDICTED: neurofascin [Saimiri boliviensis boliviensis]
          Length = 1316

 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 329 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 387

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 388 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 446

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 447 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 506

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 507 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 565

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 566 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVHLECRVKHD 625

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 626 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 682

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 683 YLTVLADQATPTN 695



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 155/666 (23%), Positives = 261/666 (39%), Gaps = 77/666 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 244 GLPSPVIFWMSSSMEPIAQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 302

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 303 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 360

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 361 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 416

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 417 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 474

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 475 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 534

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 535 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 593

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIREL 455
            V+ P       T I  +   +       V  +    H    K+  +W + D    I   
Sbjct: 594 EVKDP-------TRIYRMPEDQVAKRGTTVHLECRVKHDPSLKLTVSWLKDDEPLYIGNR 646

Query: 456 IVNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
           +  + +S T                 TE+D+ +  +K +  VLA       P + + +  
Sbjct: 647 MKKEDDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLADQAT---PTNRLAAL- 700

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
            P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   Y
Sbjct: 701 -PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKY 758

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRG 612
              P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G
Sbjct: 759 ---PGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEG 815

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
           +  NN+ I+WT M       P+ +Y + WRR  T EAWN  +V  W  S  V+   P + 
Sbjct: 816 TRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQTPVYV 872

Query: 673 PYEIKV 678
           PYEI+V
Sbjct: 873 PYEIRV 878



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 9/172 (5%)

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           ++W P++  S  G    Y V+ W  ++   +   + V        +   +VP      RV
Sbjct: 823 ITWTPMNATSAFGPNLRYIVK-WRRRETREAWNNVTVWGSRYVVGQTPVYVPYE---IRV 878

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
            A N    GP  E +   + E +P   +             L+W  PE PNG+++GY +K
Sbjct: 879 QAENDFGKGPEPESVIGYSGEDLPSAPRRFRVRQPNLETINLEWDHPEHPNGIMLGYTLK 938

Query: 541 YQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           Y +  GTKVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 939 YVAFNGTKVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 986



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 134 DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 193

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 194 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 253

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK---- 305
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K    
Sbjct: 254 SSSMEPIAQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 313

Query: 306 ----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
               E T     P+       V  G      C A   P+    I W +     D  S+  
Sbjct: 314 RGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 369

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 370 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 425



 Score = 47.4 bits (111), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++  
Sbjct: 112 NELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 171

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
                + D           GEY CFARNK GTA     L+ +    ++  P    E+ + 
Sbjct: 172 RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 226

Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 227 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--AQDKRVSQGHNGDLYFSNVMLQ 282

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
           D    Y+C A+      I+ +   T++V
Sbjct: 283 DMQTDYSCNARFHFTHTIQQKNPFTLKV 310


>gi|109731501|gb|AAI14571.1| NRCAM protein [Homo sapiens]
          Length = 1180

 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 147/421 (34%), Positives = 210/421 (49%), Gaps = 28/421 (6%)

Query: 24  ISASQNRHAPK-----QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPS 77
           ISA  +R  P      +   + K+E  LR   + L CI  G P P   W+K DG  + P 
Sbjct: 239 ISAKSSRERPPTFLTPEGNASNKEE--LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPK 294

Query: 78  DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINA 137
           +R    N+ K+L I HV  +D G+Y C   N +G A  ++I + V AAPY+   P+ +  
Sbjct: 295 NRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALG-AIHHTISVRVKAAPYWITAPQNLVL 353

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  E  T  C+A+G P+P I W+ NG PI  AP +P RK+  + I   N+++  +  Y C
Sbjct: 354 SPGEDGTLICRANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQC 413

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQ 256
           NA+N  GY+  + +VNVLA  P I       Y V   +  +L C  FG+P P + W    
Sbjct: 414 NASNEYGYLLANAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGA 473

Query: 257 K--ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
           K   L    Y + E G L+I       +G YTC ARNKLG A+    L +K+ T I  QP
Sbjct: 474 KGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDATWIVKQP 533

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           E   V+ G   +F C    D +L L+++WL+ +   +  S+ RF    D+ L V   S+ 
Sbjct: 534 EYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNR--ELPSDERFTVDKDH-LVVADVSDD 590

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPS----------NFTLIQVIDAKKAVVSWN 424
           DSG YTC A T LD + A A L+V  P   P+          +  L   +D K   +SW 
Sbjct: 591 DSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWT 649

Query: 425 P 425
           P
Sbjct: 650 P 650



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 164/640 (25%), Positives = 258/640 (40%), Gaps = 66/640 (10%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTC--EVSNGVGEAKSYSIDLSVLAA------PYF 128
           S+R+SQG  G       +    +  Y C    ++     +   I + V++A      P  
Sbjct: 191 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISAKSSRERPPT 250

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---R 181
            + PE   + +EE     ++ EC A GLP P I+W    K     P N  R V  N    
Sbjct: 251 FLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKT 305

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR 241
           + I ++ ++D+GNY C A N+LG ++  + V V A AP    AP++     G+   L CR
Sbjct: 306 LQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICR 364

Query: 242 VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQG 298
             G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    
Sbjct: 365 ANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLA 424

Query: 299 SGSLTVKEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           +  + V         P +  Y+V A + A   C     P    +I W +G++      E 
Sbjct: 425 NAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-ED 481

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDA 416
            +V   + +L +  + +  +G YTC A+ +L   + +  L ++       + T I     
Sbjct: 482 IYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIK-------DATWIVKQPE 534

Query: 417 KKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
              V   + VS +    H     +     KD     REL  +  E  T + D  V A  +
Sbjct: 535 YAVVQRGSMVSFECKVKHDHTLSLTVLWLKDN----RELPSD--ERFTVDKDHLVVADVS 588

Query: 477 FARVLAFNGAYNG-----PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKW 524
                 +    N        S ++S V P   P  V  +   P           +  L W
Sbjct: 589 DDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSW 648

Query: 525 VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAG 584
              +  N  +  + I+Y+        P L         T T+A+L  L P   Y   +  
Sbjct: 649 TPGDDNNSPITKFIIEYEDAMHK---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMA 704

Query: 585 YTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
               G      A  +YL     P KNP  VEG GS P+NLVI+W  +   E N P  +Y+
Sbjct: 705 VNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYK 764

Query: 639 IFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           + WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 765 VSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 802



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 825  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 883

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 884  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 943

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 944  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 999

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1000 NFSTRYKFYFYAQTSAGSGSQ 1020



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 138/605 (22%), Positives = 226/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 361 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 416

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 417 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 474

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +   A  I + 
Sbjct: 475 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDATWIVKQ 532

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 533 PEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDS 592

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 593 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 647

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 648 WTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 707

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 708 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 766

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 767 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDMGFAPEPAVVMGHSGE 823

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 824 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 883

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 884 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 936

Query: 616 NNLVI 620
           ++L I
Sbjct: 937 SSLKI 941



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 124/301 (41%), Gaps = 40/301 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 EHTHIT--DQPEDYEVEAGQSAT---FRCNAVSDPSLKLS-----IVWLR--GSEPIDFE 353
             +  +  ++P  +    G ++     R N +S   +        I W +  G  P +  
Sbjct: 238 VISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKN-- 295

Query: 354 SEPRFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFT 409
              R V  N + +L +   SE DSG Y C A+  L  I    ++ V+     + AP N  
Sbjct: 296 ---RTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLV 352

Query: 410 L 410
           L
Sbjct: 353 L 353



 Score = 40.0 bits (92), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWI 253
           + C   ++L        +  L   P IT+    +Y +D +  +V+ C   G P P  +W 
Sbjct: 22  FLCQMISALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWT 81

Query: 254 HNQKELTGGRYTILE----TGDLKITDVAFADS----GEYTCFARNKLGTAQGSGSLTVK 305
            N       +  ++     TG L I  ++   +    G Y C ARN+ G A  +  +   
Sbjct: 82  RNGTHFDIDKDPLVTMKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRP 141

Query: 306 EHTHI--TDQPEDYEVEAGQSATFRC 329
             + +   ++ E   +++GQS    C
Sbjct: 142 SRSPLWTKEKLEPITLQSGQSLVLPC 167


>gi|410986309|ref|XP_003999453.1| PREDICTED: neurofascin isoform 5 [Felis catus]
          Length = 1175

 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 201/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 264 TASSQMVLRGMDLVLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 322

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 323 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 381

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 382 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 441

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 442 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 500

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 501 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 560

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 561 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 617

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 618 YLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 647



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 154/671 (22%), Positives = 258/671 (38%), Gaps = 85/671 (12%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 162 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 220

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
             ++++ + +   PY        P+  +A    E T +F                    E
Sbjct: 221 KNAFTLKV-LTNNPYNDSSLRNHPDIYSARGVAERTPSFMYPQGTASSQMVLRGMDLVLE 279

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 280 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 336

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 337 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 395

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 396 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 453

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 454 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 512

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 513 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKL 565

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII---- 495
             +W + D    I   +  + +S T            F       G+Y    S  +    
Sbjct: 566 TVSWLKDDEPLYIGNRMKKEDDSLTI-----------FGVAERDQGSYTCVASTELDQDL 614

Query: 496 --SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
             +++T  G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   
Sbjct: 615 AKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWH 673

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDN 607
           +   +   P + ++ +  L P   Y+  +    + G    S      +     P  NP +
Sbjct: 674 DHSKF---PGSVNSAVLQLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPAD 730

Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667
           V+G G+  NN+ I+WT M       P+ +Y + WRR  T E WN  +V  W  S  V+  
Sbjct: 731 VKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQ 787

Query: 668 QPTFQPYEIKV 678
            P + PYEI+V
Sbjct: 788 TPVYVPYEIRV 798



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 101/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP++   I+V+++    + WN V P +++
Sbjct: 794  YEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVK-IRVLNSTAISLQWNRVYPDTVQ 852

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     S+     R+     G+     V +  P S     ++  NG  
Sbjct: 853  GQLREYRAYYWRESSLLKSLWVSQKRQQASFPGDRPRGVVSRLFPYSNYKLEMVVVNGRG 912

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY +KY +  GT
Sbjct: 913  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLKYVAFNGT 972

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 973  KLGKQIVENF----SPNQTKFTMQRADPVSRYRFTLSARTQVGSG 1013



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 121/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 52  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 111

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 112 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 171

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q   + T+K  T+
Sbjct: 172 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNAFTLKVLTN 231

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 232 NPYNDSSLRNHPDIYSARGVAERTPSFMYPQGTASSQMVLRGMDLVLECIASGVPT--PD 289

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 290 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 347

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 348 APYWLDEPKNLIL 360



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 100/251 (39%), Gaps = 47/251 (18%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L+  P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 32  LSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 91

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 92  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 146

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 147 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 202

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
              Y+C A+          T T+Q      + FTL         V++ NP +  SLR H 
Sbjct: 203 QTDYSCNARFHF-------THTIQ----QKNAFTL--------KVLTNNPYNDSSLRNHP 243

Query: 436 RGYKVQTWTEK 446
             Y  +   E+
Sbjct: 244 DIYSARGVAER 254


>gi|119603833|gb|EAW83427.1| neuronal cell adhesion molecule, isoform CRA_a [Homo sapiens]
          Length = 1181

 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 173/550 (31%), Positives = 253/550 (46%), Gaps = 43/550 (7%)

Query: 24  ISASQNRHAPK-----QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPS 77
           ISA  +R  P      +   + K+E  LR   + L CI  G P P   W+K DG  + P 
Sbjct: 233 ISAKSSRERPPTFLTPEGNASNKEE--LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPK 288

Query: 78  DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINA 137
           +R    N+ K+L I HV  +D G+Y C   N +G A  ++I + V AAPY+   P+ +  
Sbjct: 289 NRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALG-AIHHTISVRVKAAPYWITAPQNLVL 347

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  E  T  C+A+G P+P I W+ NG PI  AP +P RK+  + I   N+++  +  Y C
Sbjct: 348 SPGEDGTLICRANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQC 407

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQ 256
           NA+N  GY+  + +VNVLA  P I       Y V   +  +L C  FG+P P + W    
Sbjct: 408 NASNEYGYLLANAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGA 467

Query: 257 K--ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
           K   L    Y + E G L+I       +G YTC ARNKLG A+    L +K+ T I  QP
Sbjct: 468 KGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDATWIVKQP 527

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           E   V+ G   +F C    D +L L+++WL+ +   +  S+ RF    D+ L V   S+ 
Sbjct: 528 EYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNR--ELPSDERFTVDKDH-LVVADVSDD 584

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPS----------NFTLIQVIDAKKAVVSWN 424
           DSG YTC A T LD + A A L+V  P   P+          +  L   +D K   +SW 
Sbjct: 585 DSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWT 643

Query: 425 PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN 484
           P    +       + ++        G         G  TT ++ K  P      RV+A N
Sbjct: 644 PGDDNN--SPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQL-KLSPYVNYSFRVMAVN 700

Query: 485 GAYNGPPSE-----IISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPE---QPNGVLMG 536
                 PSE     +     P+  P  V+ L + P       + W KP    + NG  + 
Sbjct: 701 SIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEP---DNLVITW-KPLNGFESNGPGLQ 756

Query: 537 YKIKYQSVKG 546
           YK+ ++   G
Sbjct: 757 YKVSWRQKDG 766



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 164/640 (25%), Positives = 258/640 (40%), Gaps = 66/640 (10%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTC--EVSNGVGEAKSYSIDLSVLAA------PYF 128
           S+R+SQG  G       +    +  Y C    ++     +   I + V++A      P  
Sbjct: 185 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISAKSSRERPPT 244

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---R 181
            + PE   + +EE     ++ EC A GLP P I+W    K     P N  R V  N    
Sbjct: 245 FLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKT 299

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR 241
           + I ++ ++D+GNY C A N+LG ++  + V V A AP    AP++     G+   L CR
Sbjct: 300 LQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICR 358

Query: 242 VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQG 298
             G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    
Sbjct: 359 ANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLA 418

Query: 299 SGSLTVKEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           +  + V         P +  Y+V A + A   C     P    +I W +G++      E 
Sbjct: 419 NAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-ED 475

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDA 416
            +V   + +L +  + +  +G YTC A+ +L   + +  L ++       + T I     
Sbjct: 476 IYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIK-------DATWIVKQPE 528

Query: 417 KKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
              V   + VS +    H     +     KD     REL  +  E  T + D  V A  +
Sbjct: 529 YAVVQRGSMVSFECKVKHDHTLSLTVLWLKDN----RELPSD--ERFTVDKDHLVVADVS 582

Query: 477 FARVLAFNGAYNG-----PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKW 524
                 +    N        S ++S V P   P  V  +   P           +  L W
Sbjct: 583 DDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSW 642

Query: 525 VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAG 584
              +  N  +  + I+Y+        P L         T T+A+L  L P   Y   +  
Sbjct: 643 TPGDDNNSPITKFIIEYEDAMHK---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMA 698

Query: 585 YTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
               G      A  +YL     P KNP  VEG GS P+NLVI+W  +   E N P  +Y+
Sbjct: 699 VNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYK 758

Query: 639 IFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           + WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 759 VSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 796



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 19/208 (9%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGY------------KVQTWTEKD 447
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY            K Q+ ++++
Sbjct: 819  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRASERGPFIYYWKTQSSSKRN 877

Query: 448  GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV 507
                 ++++  +G  T   +    P S     V   NG   GP S    F TPEGVP   
Sbjct: 878  RRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAP 937

Query: 508  QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTT 565
             SL+ +     +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T
Sbjct: 938  SSLKIVNPTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKT 993

Query: 566  SAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
               L  L  ST+Y+ +    T AG G++
Sbjct: 994  RWTLKNLNFSTRYKFYFYAQTSAGSGSQ 1021



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 85/330 (25%), Positives = 130/330 (39%), Gaps = 48/330 (14%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNG-------K 164
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  ISALEVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKD 86

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDT--GNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           P+    P      G   I I +  K++T  G Y C A N  G    +  V   + +P  T
Sbjct: 87  PLVTMKPG----TGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWT 142

Query: 223 EAPKDEYTVD-GKTVVLTCRVFGAPKPEVN-WIHN--QKELTGGRYTILETGDLKITDVA 278
           +   +  T+  G+++VL CR      P +  W+ N  Q+     R +    GDL  ++V 
Sbjct: 143 KEKLEPITLQSGQSLVLPCRPPIGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVL 202

Query: 279 FADSGE-YTCFAR-NKLGTAQGSGSLTVK--EHTHITDQPEDYEVEAGQSAT---FRCNA 331
             D+ E Y C+AR N   T Q    ++VK        ++P  +    G ++     R N 
Sbjct: 203 PEDTREDYICYARFNHTQTIQQKQPISVKVISAKSSRERPPTFLTPEGNASNKEELRGNV 262

Query: 332 VSDPSLKLS-----IVWLR--GSEPIDFESEPRFVQSN-DYSLTVTKSSELDSGQYTCRA 383
           +S   +        I W +  G  P +     R V  N + +L +   SE DSG Y C A
Sbjct: 263 LSLECIAEGLPTPIIYWAKEDGMLPKN-----RTVYKNFEKTLQIIHVSEADSGNYQCIA 317

Query: 384 QTELDFIEAQATLTVQVP---LEAPSNFTL 410
           +  L  I    ++ V+     + AP N  L
Sbjct: 318 KNALGAIHHTISVRVKAAPYWITAPQNLVL 347


>gi|296230536|ref|XP_002760746.1| PREDICTED: neurofascin isoform 1 [Callithrix jacchus]
          Length = 1240

 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 252 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 310

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 311 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 369

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 370 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 429

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 430 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 488

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 489 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 548

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 549 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 605

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 606 YLTVLADQATPTN 618



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 155/666 (23%), Positives = 261/666 (39%), Gaps = 77/666 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 167 GLPSPVIFWMSSSMEPIAQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 225

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 226 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 283

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 284 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 339

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 340 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 397

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 398 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 457

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 458 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 516

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIREL 455
            V+ P       T I  +   +       V  +    H    K+  +W + D    I   
Sbjct: 517 EVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNR 569

Query: 456 IVNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
           +  + +S T                 TE+D+ +  +K +  VLA       P + + +  
Sbjct: 570 MKKEDDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLADQAT---PTNRLAAL- 623

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
            P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   Y
Sbjct: 624 -PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKY 681

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRG 612
              P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G
Sbjct: 682 ---PGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEG 738

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
           +  NN+ I+WT M       P+ +Y + WRR  T EAWN  +V  W  S  V+   P + 
Sbjct: 739 TRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQTPVYV 795

Query: 673 PYEIKV 678
           PYEI+V
Sbjct: 796 PYEIRV 801



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 9/172 (5%)

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           ++W P++  S  G    Y V+ W  ++   +   + V        +   +VP      RV
Sbjct: 746 ITWTPMNATSAFGPNLRYIVK-WRRRETREAWNNVTVWGSRYVVGQTPVYVPYE---IRV 801

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
            A N    GP  E +   + E +P   +             L+W  PE PNG+++GY +K
Sbjct: 802 QAENDFGKGPEPESVIGYSGEDLPSAPRRFRVRQPNLETINLEWDHPEHPNGIMLGYTLK 861

Query: 541 YQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           Y +  GTKVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 862 YVAFNGTKVGKQIVENF----SPNQTKFVVQRTDPVSRYRFTLSARTQVGSG 909



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 57  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 116

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 117 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 176

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK---- 305
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K    
Sbjct: 177 SSSMEPIAQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 236

Query: 306 ----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
               E T     P+       V  G      C A   P+    I W +     D  S+  
Sbjct: 237 RGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 292

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 293 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 348



 Score = 47.4 bits (111), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++  
Sbjct: 35  NELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 94

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
                + D           GEY CFARNK GTA     L+ +    ++  P    E+ + 
Sbjct: 95  RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 149

Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 150 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--AQDKRVSQGHNGDLYFSNVMLQ 205

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
           D    Y+C A+      I+ +   T++V
Sbjct: 206 DMQTDYSCNARFHFTHTIQQKNPFTLKV 233


>gi|40788219|dbj|BAA20801.2| KIAA0343 [Homo sapiens]
          Length = 1187

 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 147/421 (34%), Positives = 210/421 (49%), Gaps = 28/421 (6%)

Query: 24  ISASQNRHAPK-----QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPS 77
           ISA  +R  P      +   + K+E  LR   + L CI  G P P   W+K DG  + P 
Sbjct: 246 ISAKSSRERPPTFLTPEGNASNKEE--LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPK 301

Query: 78  DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINA 137
           +R    N+ K+L I HV  +D G+Y C   N +G A  ++I + V AAPY+   P+ +  
Sbjct: 302 NRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALG-AIHHTISVRVKAAPYWITAPQNLVL 360

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  E  T  C+A+G P+P I W+ NG PI  AP +P RK+  + I   N+++  +  Y C
Sbjct: 361 SPGEDGTLICRANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQC 420

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQ 256
           NA+N  GY+  + +VNVLA  P I       Y V   +  +L C  FG+P P + W    
Sbjct: 421 NASNEYGYLLANAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGA 480

Query: 257 K--ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
           K   L    Y + E G L+I       +G YTC ARNKLG A+    L +K+ T I  QP
Sbjct: 481 KGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDATWIVKQP 540

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           E   V+ G   +F C    D +L L+++WL+ +   +  S+ RF    D+ L V   S+ 
Sbjct: 541 EYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNR--ELPSDERFTVDKDH-LVVADVSDD 597

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPS----------NFTLIQVIDAKKAVVSWN 424
           DSG YTC A T LD + A A L+V  P   P+          +  L   +D K   +SW 
Sbjct: 598 DSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWT 656

Query: 425 P 425
           P
Sbjct: 657 P 657



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 164/640 (25%), Positives = 258/640 (40%), Gaps = 66/640 (10%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTC--EVSNGVGEAKSYSIDLSVLAA------PYF 128
           S+R+SQG  G       +    +  Y C    ++     +   I + V++A      P  
Sbjct: 198 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISAKSSRERPPT 257

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---R 181
            + PE   + +EE     ++ EC A GLP P I+W    K     P N  R V  N    
Sbjct: 258 FLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKT 312

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR 241
           + I ++ ++D+GNY C A N+LG ++  + V V A AP    AP++     G+   L CR
Sbjct: 313 LQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICR 371

Query: 242 VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQG 298
             G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    
Sbjct: 372 ANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLA 431

Query: 299 SGSLTVKEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           +  + V         P +  Y+V A + A   C     P    +I W +G++      E 
Sbjct: 432 NAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-ED 488

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDA 416
            +V   + +L +  + +  +G YTC A+ +L   + +  L ++       + T I     
Sbjct: 489 IYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIK-------DATWIVKQPE 541

Query: 417 KKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
              V   + VS +    H     +     KD     REL  +  E  T + D  V A  +
Sbjct: 542 YAVVQRGSMVSFECKVKHDHTLSLTVLWLKDN----RELPSD--ERFTVDKDHLVVADVS 595

Query: 477 FARVLAFNGAYNG-----PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKW 524
                 +    N        S ++S V P   P  V  +   P           +  L W
Sbjct: 596 DDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSW 655

Query: 525 VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAG 584
              +  N  +  + I+Y+        P L         T T+A+L  L P   Y   +  
Sbjct: 656 TPGDDNNSPITKFIIEYEDAMHK---PGLWHHQTEVSGTQTTAQL-NLSPYVNYSFRVMA 711

Query: 585 YTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
               G      A  +YL     P KNP  VEG GS P+NLVI+W  +   E N P  +Y+
Sbjct: 712 VNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYK 771

Query: 639 IFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           + WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 772 VSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 809



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 832  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 890

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 891  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 950

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 951  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 1006

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1007 NFSTRYKFYFYAQTSAGSGSQ 1027



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 138/605 (22%), Positives = 226/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 368 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 423

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 424 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 481

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +   A  I + 
Sbjct: 482 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDATWIVKQ 539

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 540 PEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDS 599

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 600 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 654

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 655 WTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLNLSPYVNYSFRVMAVNS 714

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 715 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 773

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 774 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDMGFAPEPAVVMGHSGE 830

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 831 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 890

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 891 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 943

Query: 616 NNLVI 620
           ++L I
Sbjct: 944 SSLKI 948



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 122/301 (40%), Gaps = 40/301 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 69  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 124

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 125 EGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 184

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 185 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 244

Query: 306 --EHTHITDQPEDYEVEAGQSAT---FRCNAVSDPSLKLS-----IVWLR--GSEPIDFE 353
                   ++P  +    G ++     R N +S   +        I W +  G  P +  
Sbjct: 245 VISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKN-- 302

Query: 354 SEPRFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFT 409
              R V  N + +L +   SE DSG Y C A+  L  I    ++ V+     + AP N  
Sbjct: 303 ---RTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLV 359

Query: 410 L 410
           L
Sbjct: 360 L 360



 Score = 40.0 bits (92), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWI 253
           + C   ++L        +  L   P IT+    +Y +D +  +V+ C   G P P  +W 
Sbjct: 29  FLCQMISALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWT 88

Query: 254 HNQKELTGGRYTILE----TGDLKITDVAFADS----GEYTCFARNKLGTAQGSGSLTVK 305
            N       +  ++     TG L I  ++   +    G Y C ARN+ G A  +  +   
Sbjct: 89  RNGTHFDIDKDPLVTMKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRP 148

Query: 306 EHTHI--TDQPEDYEVEAGQSATFRC 329
             + +   ++ E   +++GQS    C
Sbjct: 149 SRSPLWTKEKLEPITLQSGQSLVLPC 174


>gi|6651381|gb|AAF22283.1|AF172277_2 NgCAM-related related cell adhesion molecule /alternative carboxyl
           terminus [Homo sapiens]
          Length = 1236

 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/394 (35%), Positives = 199/394 (50%), Gaps = 21/394 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  + P +R    N+ K+L I HV  +D G+Y C
Sbjct: 283 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIIHVSEADSGNYQC 340

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+   P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 341 IAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 399

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 400 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 459

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 460 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 519

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 520 TGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTV 579

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  S+ RF    D+ L V   S+ DSG YTC A T LD + A A L+V  P
Sbjct: 580 LWLKDNR--ELPSDERFTVDKDH-LVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAP 636

Query: 402 LEAPS----------NFTLIQVIDAKKAVVSWNP 425
              P+          +  L   +D K   +SW P
Sbjct: 637 TPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWTP 669



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 147/564 (26%), Positives = 234/564 (41%), Gaps = 58/564 (10%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W    K     P N  R V  N    + I ++ ++D+GNY C A
Sbjct: 288 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 342

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK-- 257
            N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 343 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 401

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N+ G    +  + V         P +
Sbjct: 402 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPAN 461

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + + 
Sbjct: 462 TLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKD 518

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVP--LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            +G YTC A+ +L   + +  L ++ P  +     + ++Q    + ++VS+     +   
Sbjct: 519 STGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQ----RGSMVSF-----ECKV 569

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG--- 489
            H     +     KD     REL  +  E  T + D  V A  +      +    N    
Sbjct: 570 KHDHTLSLTVLWLKDN----RELPSD--ERFTVDKDHLVVADVSDDDSGTYTCVANTTLD 623

Query: 490 --PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIK 540
               S ++S V P   P  V  +   P           +  L W   +  N  +  + I+
Sbjct: 624 SVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIE 683

Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKY 596
           Y+        P L         T T+A+L  L P   Y   +      G      A  +Y
Sbjct: 684 YEDAMHK---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNSIGKSLPSEASEQY 739

Query: 597 LFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
           L     P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W    
Sbjct: 740 LTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS-- 797

Query: 655 VLDWRQSELVLANQPTFQPYEIKV 678
           V+    S+ +++  PTF PY IKV
Sbjct: 798 VVVANVSKYIVSGTPTFVPYLIKV 821



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 844  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 902

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 903  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 962

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 963  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIP----ANKTRWTLKNL 1018

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1019 NFSTRYKFYFYAQTSAGSGSQ 1039



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 142/612 (23%), Positives = 231/612 (37%), Gaps = 75/612 (12%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 380 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 436 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 493

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 494 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIVKQ 551

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 552 PEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDS 611

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHT-------HITDQPEDYEVEAGQSATFRCNAVSDP 335
           G YTC A   L +   S  L+V   T        + + P D E+              D 
Sbjct: 612 GTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL----------DK 661

Query: 336 SLKLSIVWLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
           S++LS  W  G +   PI     E E    +   +      S    + Q          F
Sbjct: 662 SVQLS--WTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLKLSPYVNYSF 719

Query: 390 -IEAQATLTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHF 435
            + A  ++   +P EA   +           T ++ + ++    V++W P++     G  
Sbjct: 720 RVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPG 779

Query: 436 RGYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
             YKV +W +KDG+     ++V N  +   +    FVP      +V A N     P   +
Sbjct: 780 LQYKV-SWRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDMGFAPEPAV 835

Query: 495 ISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KV 549
           +   + E +P     ++    + S+   + W  V  +   G L GY+I Y   + +  + 
Sbjct: 836 VMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN 895

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNV 608
              +E+       + T   L GLEP + Y +++      G+G A    +F  P       
Sbjct: 896 RRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP------- 948

Query: 609 EGRGSTPNNLVI 620
           EG  S P++L I
Sbjct: 949 EGVPSAPSSLKI 960



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 126/315 (40%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 E------HTHITDQPEDYEVEAGQSATFR--------CNAVSDPSLKLSIVWLRG----- 346
                  +  I     D E    +S+  R         NA +   L+ +++ L       
Sbjct: 238 VISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGL 297

Query: 347 SEPIDFESEP-------RFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             PI + ++        R V  N + +L +   SE DSG Y C A+  L  I    ++ V
Sbjct: 298 PTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRV 357

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 358 KAAPYWITAPQNLVL 372



 Score = 39.7 bits (91), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWI 253
           + C   ++L        +  L   P IT+    +Y +D +  +V+ C   G P P  +W 
Sbjct: 22  FLCQMISALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWT 81

Query: 254 HNQKELTGGRYTILE----TGDLKITDVAFADS----GEYTCFARNKLGTAQGSGSLTVK 305
            N       +  ++     TG L I  ++   +    G Y C ARN+ G A  +  +   
Sbjct: 82  RNGTHFDIDKDPLVTMKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRP 141

Query: 306 EHTHI--TDQPEDYEVEAGQSATFRC 329
             + +   ++ E   +++GQS    C
Sbjct: 142 SRSPLWTKEKLEPITLQSGQSLVLPC 167


>gi|397504880|ref|XP_003823008.1| PREDICTED: neurofascin [Pan paniscus]
          Length = 1388

 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 401 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 459

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 460 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 518

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 519 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 578

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 579 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 637

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 638 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 697

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 698 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 754

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 755 YLTVLADQATPTN 767



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 155/666 (23%), Positives = 261/666 (39%), Gaps = 77/666 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 316 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 374

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 375 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 432

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 433 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 488

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 489 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 546

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 547 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 606

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 607 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 665

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIREL 455
            V+ P       T I  +   +       V  +    H    K+  +W + D    I   
Sbjct: 666 EVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNR 718

Query: 456 IVNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
           +  + +S T                 TE+D+ +  +K +  VLA       P + + +  
Sbjct: 719 MKKEDDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLADQAT---PTNRLAAL- 772

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
            P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   Y
Sbjct: 773 -PKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQ-FQPGVWHDHSKY 830

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRG 612
              P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G
Sbjct: 831 ---PGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEG 887

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
           +  NN+ I+WT M       P+ +Y + WRR  T EAWN  +V  W  S  V+   P + 
Sbjct: 888 TRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQTPVYV 944

Query: 673 PYEIKV 678
           PYEI+V
Sbjct: 945 PYEIRV 950



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 9/172 (5%)

Query: 421  VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
            ++W P++  S  G    Y V+ W  ++   +   + V        +   +VP      RV
Sbjct: 895  ITWTPMNATSAFGPNLRYIVK-WRRRETREAWNNVTVWGSRYVVGQTPVYVPYE---IRV 950

Query: 481  LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
             A N    GP  E +   + E +P   +             L+W  PE PNG+++GY +K
Sbjct: 951  QAENDFGKGPEPESVIGYSGEDLPSAPRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLK 1010

Query: 541  YQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            Y +  GTKVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 1011 YVAFNGTKVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 1058



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 206 DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 265

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 266 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 325

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK---- 305
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K    
Sbjct: 326 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 385

Query: 306 ----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
               E T     P+       V  G      C A   P+    I W +     D  S+  
Sbjct: 386 RGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 441

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 442 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 497



 Score = 47.4 bits (111), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++  
Sbjct: 184 NELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 243

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
                + D           GEY CFARNK GTA     L+ +    ++  P    E+ + 
Sbjct: 244 RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 298

Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 299 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 354

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
           D    Y+C A+      I+ +   T++V
Sbjct: 355 DMQTDYSCNARFHFTHTIQQKNPFTLKV 382


>gi|380810882|gb|AFE77316.1| neurofascin isoform 2 precursor [Macaca mulatta]
          Length = 1189

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 263 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 321

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 322 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 380

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 381 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 440

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 441 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 499

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 500 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 559

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 560 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 616

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 617 YLTVLADQATPTN 629



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 160/682 (23%), Positives = 265/682 (38%), Gaps = 92/682 (13%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 220 KNPFTLKV-LTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLE 278

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 279 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 335

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 336 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 394

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 395 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 452

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 453 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 511

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 512 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKL 564

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTT-----------------TEVDKFVPASKNFARVLA 482
             +W + D    I   +  + +S T                 TE+D+ +  +K +  VLA
Sbjct: 565 TVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLA 622

Query: 483 FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
                  P + + +   P G P   + LE   L   +  L W+  +  N  +  Y ++++
Sbjct: 623 DQAT---PTNRLAAL--PIGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFE 677

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KY 596
             +  + G   +   Y   P + ++ +  L P   Y+  +    + G    S      + 
Sbjct: 678 EDQ-FQPGVWHDHSKY---PGSVNSAVLRLSPYVNYQFRVIAVNEVGSSHPSLPSERYRT 733

Query: 597 LFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVL 656
               P  NP +V+G G+  NN+ I+WT M       P+ +Y + WRR  T EAWN  +V 
Sbjct: 734 SGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVT 791

Query: 657 DWRQSELVLANQPTFQPYEIKV 678
            W  S  V+   P + PYEI+V
Sbjct: 792 VW-GSRYVVGQTPVYVPYEIRV 812



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     +V        P  AP+    ++V+++    + WN V P +++
Sbjct: 808  YEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVK-VRVMNSTAISLQWNRVYPDTVQ 866

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 867  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRG 926

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG++ GY +KY +  GT
Sbjct: 927  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMTGYTLKYVAFNGT 986

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            KVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 987  KVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 1027



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 120/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 230

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 231 HPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PD 288

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 289 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 346

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 347 APYWLDEPKNLIL 359



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 29/213 (13%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQVPLEAPSN 407
              Y+C A+      I+ +   T++V    P N
Sbjct: 202 QTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN 234


>gi|302191649|ref|NP_001180512.1| neuronal cell adhesion molecule isoform E precursor [Homo sapiens]
          Length = 1192

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 147/421 (34%), Positives = 210/421 (49%), Gaps = 28/421 (6%)

Query: 24  ISASQNRHAPK-----QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPS 77
           ISA  +R  P      +   + K+E  LR   + L CI  G P P   W+K DG  + P 
Sbjct: 239 ISAKSSRERPPTFLTPEGNASNKEE--LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPK 294

Query: 78  DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINA 137
           +R    N+ K+L I HV  +D G+Y C   N +G A  ++I + V AAPY+   P+ +  
Sbjct: 295 NRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALG-AIHHTISVRVKAAPYWITAPQNLVL 353

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  E  T  C+A+G P+P I W+ NG PI  AP +P RK+  + I   N+++  +  Y C
Sbjct: 354 SPGEDGTLICRANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQC 413

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQ 256
           NA+N  GY+  + +VNVLA  P I       Y V   +  +L C  FG+P P + W    
Sbjct: 414 NASNEYGYLLANAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGA 473

Query: 257 K--ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
           K   L    Y + E G L+I       +G YTC ARNKLG A+    L +K+ T I  QP
Sbjct: 474 KGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQP 533

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           E   V+ G   +F C    D +L L+++WL+ +   +  S+ RF    D+ L V   S+ 
Sbjct: 534 EYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNR--ELPSDERFTVDKDH-LVVADVSDD 590

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPS----------NFTLIQVIDAKKAVVSWN 424
           DSG YTC A T LD + A A L+V  P   P+          +  L   +D K   +SW 
Sbjct: 591 DSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWT 649

Query: 425 P 425
           P
Sbjct: 650 P 650



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 163/642 (25%), Positives = 263/642 (40%), Gaps = 70/642 (10%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTC--EVSNGVGEAKSYSIDLSVLAA------PYF 128
           S+R+SQG  G       +    +  Y C    ++     +   I + V++A      P  
Sbjct: 191 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISAKSSRERPPT 250

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---R 181
            + PE   + +EE     ++ EC A GLP P I+W    K     P N  R V  N    
Sbjct: 251 FLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKT 305

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR 241
           + I ++ ++D+GNY C A N+LG ++  + V V A AP    AP++     G+   L CR
Sbjct: 306 LQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICR 364

Query: 242 VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQG 298
             G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    
Sbjct: 365 ANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLA 424

Query: 299 SGSLTVKEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           +  + V         P +  Y+V A + A   C     P    +I W +G++      E 
Sbjct: 425 NAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-ED 481

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP--LEAPSNFTLIQVI 414
            +V   + +L +  + +  +G YTC A+ +L   + +  L ++ P  +     + ++Q  
Sbjct: 482 IYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQ-- 539

Query: 415 DAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
             + ++VS+     +    H     +     KD     REL  +  E  T + D  V A 
Sbjct: 540 --RGSMVSF-----ECKVKHDHTLSLTVLWLKDN----RELPSD--ERFTVDKDHLVVAD 586

Query: 475 KNFARVLAFNGAYNG-----PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYL 522
            +      +    N        S ++S V P   P  V  +   P           +  L
Sbjct: 587 VSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQL 646

Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
            W   +  N  +  + I+Y+        P L         T T+A+L  L P   Y   +
Sbjct: 647 SWTPGDDNNSPITKFIIEYEDAMHK---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRV 702

Query: 583 AGYTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
                 G      A  +YL     P KNP  VEG GS P+NLVI+W  +   E N P  +
Sbjct: 703 MAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQ 762

Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           Y++ WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 763 YKVSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 802



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 825  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 883

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 884  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 943

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 944  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 999

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1000 NFSTRYKFYFYAQTSAGSGSQ 1020



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 137/605 (22%), Positives = 225/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 361 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 416

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 417 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 474

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 475 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIVKQ 532

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 533 PEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDS 592

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 593 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 647

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 648 WTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 707

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 708 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 766

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 767 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDMGFAPEPAVVMGHSGE 823

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 824 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 883

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 884 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 936

Query: 616 NNLVI 620
           ++L I
Sbjct: 937 SSLKI 941



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 122/301 (40%), Gaps = 40/301 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 --EHTHITDQPEDYEVEAGQSAT---FRCNAVSDPSLKLS-----IVWLR--GSEPIDFE 353
                   ++P  +    G ++     R N +S   +        I W +  G  P +  
Sbjct: 238 VISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKN-- 295

Query: 354 SEPRFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFT 409
              R V  N + +L +   SE DSG Y C A+  L  I    ++ V+     + AP N  
Sbjct: 296 ---RTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLV 352

Query: 410 L 410
           L
Sbjct: 353 L 353



 Score = 40.0 bits (92), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWI 253
           + C   ++L        +  L   P IT+    +Y +D +  +V+ C   G P P  +W 
Sbjct: 22  FLCQMISALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWT 81

Query: 254 HNQKELTGGRYTILE----TGDLKITDVAFADS----GEYTCFARNKLGTAQGSGSLTVK 305
            N       +  ++     TG L I  ++   +    G Y C ARN+ G A  +  +   
Sbjct: 82  RNGTHFDIDKDPLVTMKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRP 141

Query: 306 EHTHI--TDQPEDYEVEAGQSATFRC 329
             + +   ++ E   +++GQS    C
Sbjct: 142 SRSPLWTKEKLEPITLQSGQSLVLPC 167


>gi|345797904|ref|XP_856244.2| PREDICTED: neurofascin isoform 8 [Canis lupus familiaris]
          Length = 1236

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 252 TASSQMVLRGTDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 310

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 311 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 369

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 370 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 429

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 430 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 488

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 489 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 548

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 549 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 605

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 606 YLTVLADQATPTN 618



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 153/666 (22%), Positives = 260/666 (39%), Gaps = 77/666 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 167 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 225

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
             ++++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 226 KNAFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGTD--LLLECIASGVPTPDIAWYKK 283

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 284 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 339

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 340 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 397

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 398 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 457

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 458 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 516

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIREL 455
            V+ P       T I  +   +       V  +    H    K+  +W + D    I   
Sbjct: 517 EVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNR 569

Query: 456 IVNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
           +  + +S T                 TE+D+ +  +K +  VLA       P + + +  
Sbjct: 570 MKKEDDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLADQAT---PTNRLAAL- 623

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
            P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   +
Sbjct: 624 -PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKF 681

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRG 612
              P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G
Sbjct: 682 ---PGSVNSAILQLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEG 738

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
           +  NN+ I+WT M       P+ +Y + WRR  T E WN   V  W  S  V+   P + 
Sbjct: 739 TRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWNNATV--W-GSRYVVGQTPVYV 795

Query: 673 PYEIKV 678
           PYEI+V
Sbjct: 796 PYEIRV 801



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 118/296 (39%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RRK G   I   +  + +   G Y
Sbjct: 57  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRKSGTLVIDFRSGGRPEEYEGEY 116

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 117 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 176

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK---- 305
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q   + T+K    
Sbjct: 177 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNAFTLKVLTT 236

Query: 306 ----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
               E T     P+       V  G      C A   P+    I W +     D  S+  
Sbjct: 237 RGVAERTPSFMYPQGTASSQMVLRGTDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 292

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 293 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 348



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 9/172 (5%)

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           ++W P++  S  G    Y V+ W  ++   +     V        +   +VP      RV
Sbjct: 746 ITWTPMNATSAFGPNLRYIVK-WRRRETRETWNNATVWGSRYVVGQTPVYVPYE---IRV 801

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
            A N    GP  + +   + E +P   +             L+W  PE PNG+L+GY +K
Sbjct: 802 QAENDFGKGPEPDTVIGYSGEDLPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLK 861

Query: 541 YQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           Y +  GTK+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 862 YVAFNGTKLGKQIVENF----SPNQTKFTMQRADPVSRYRFTLSARTQVGSG 909



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 86/208 (41%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L+  P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++  
Sbjct: 35  NELSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 94

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
                + D           GEY CFARNK GTA     L+ +    ++  P    E+ + 
Sbjct: 95  KSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 149

Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 150 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 205

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
           D    Y+C A+      I+ +   T++V
Sbjct: 206 DMQTDYSCNARFHFTHTIQQKNAFTLKV 233


>gi|297681289|ref|XP_002818390.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Pongo abelii]
          Length = 1192

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 174/550 (31%), Positives = 256/550 (46%), Gaps = 43/550 (7%)

Query: 24  ISASQNRHAPK-----QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPS 77
           ISA  +R  P      +   + K+E  LR   + L CI  G P P   W+K DG  + P 
Sbjct: 239 ISAKSSRERPPTFLTPEGNASNKEE--LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPK 294

Query: 78  DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINA 137
           +R    N+ K+L I HV  +D G+Y C   N +G A  ++I + V AAPY+   P+ +  
Sbjct: 295 NRTVYKNFEKTLQIIHVSEADSGNYQCVAKNALG-AIHHTISVRVKAAPYWITAPQNLVL 353

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  E  T  C+A+G P+P I W+ NG PI  AP +P RK+  + I   N+++  +  Y C
Sbjct: 354 SPGEDGTLICRANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQC 413

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQ 256
           NA+N  GY+  + +VNVLA  P I       Y V   +  +L C  FG+P P + W    
Sbjct: 414 NASNDYGYLLANAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGA 473

Query: 257 K--ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
           K   L    Y + E G L+I       +G YTC ARNKLG A+    L +K+ T I  QP
Sbjct: 474 KGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQP 533

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           E   V+ G   +F C    D +L L+++WL+ +   +  S+ RF    D+ L V   S+ 
Sbjct: 534 EYAVVQRGSMVSFECKVKHDHTLILTVLWLKDNR--ELPSDERFTVDKDH-LVVADVSDD 590

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPS----------NFTLIQVIDAKKAVVSWN 424
           DSG YTC A T LD + A A L+V  P   P+          +  L   +D K   +SW 
Sbjct: 591 DSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWT 649

Query: 425 PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN 484
           P    +       + ++        G         G  TT ++ K  P      RV+A N
Sbjct: 650 PGDDNN--SPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQL-KLSPYVNYSFRVMAVN 706

Query: 485 GAYNGPPSEII-SFVT----PEGVPGTVQSLEAIPLGSSAFYLKWVKPE---QPNGVLMG 536
                 PSE+   ++T    P+  P  V+ L + P       + W KP    + NG  + 
Sbjct: 707 SIGKSLPSEVSEQYLTKASEPDKNPTAVEGLGSEP---DNLVITW-KPLNGFESNGPGLQ 762

Query: 537 YKIKYQSVKG 546
           YK+ ++   G
Sbjct: 763 YKVSWRQKDG 772



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 163/642 (25%), Positives = 262/642 (40%), Gaps = 70/642 (10%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTC--EVSNGVGEAKSYSIDLSVLAA------PYF 128
           S+R+SQG  G       +    +  Y C    ++     +   I + V++A      P  
Sbjct: 191 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISAKSSRERPPT 250

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---R 181
            + PE   + +EE     ++ EC A GLP P I+W    K     P N  R V  N    
Sbjct: 251 FLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKT 305

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR 241
           + I ++ ++D+GNY C A N+LG ++  + V V A AP    AP++     G+   L CR
Sbjct: 306 LQIIHVSEADSGNYQCVAKNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICR 364

Query: 242 VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQG 298
             G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N  G    
Sbjct: 365 ANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNDYGYLLA 424

Query: 299 SGSLTVKEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           +  + V         P +  Y+V A + A   C     P    +I W +G++      E 
Sbjct: 425 NAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-ED 481

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP--LEAPSNFTLIQVI 414
            +V   + +L +  + +  +G YTC A+ +L   + +  L ++ P  +     + ++Q  
Sbjct: 482 IYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQ-- 539

Query: 415 DAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
             + ++VS+     +    H     +     KD     REL  +  E  T + D  V A 
Sbjct: 540 --RGSMVSF-----ECKVKHDHTLILTVLWLKDN----RELPSD--ERFTVDKDHLVVAD 586

Query: 475 KNFARVLAFNGAYNG-----PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYL 522
            +      +    N        S ++S V P   P  V  +   P           +  L
Sbjct: 587 VSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQL 646

Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
            W   +  N  +  + I+Y+        P L         T T+A+L  L P   Y   +
Sbjct: 647 SWTPGDDNNSPITKFIIEYEDAMHE---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRV 702

Query: 583 AGYTKAGDGAES----KYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
                 G    S    +YL     P KNP  VEG GS P+NLVI+W  +   E N P  +
Sbjct: 703 MAVNSIGKSLPSEVSEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQ 762

Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           Y++ WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 763 YKVSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 802



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 825  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 883

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 884  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 943

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 944  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 999

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1000 NFSTRYKFYFYAQTSAGSGSQ 1020



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 137/605 (22%), Positives = 224/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 361 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 416

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 417 NDYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 474

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 475 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIVKQ 532

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 533 PEYAVVQRGSMVSFECKVKHDHTLILTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDS 592

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 593 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 647

Query: 343 WLRGSE---PI--------DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           W  G +   PI        D   EP              +++L    Y   +   +    
Sbjct: 648 WTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 707

Query: 392 AQATLTVQV-------PLEAPSNFTLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
              +L  +V         E   N T ++ + ++    V++W P++     G    YKV +
Sbjct: 708 IGKSLPSEVSEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 766

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 767 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAVVMGHSGE 823

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 824 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 883

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 884 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 936

Query: 616 NNLVI 620
           ++L I
Sbjct: 937 SSLKI 941



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 122/301 (40%), Gaps = 40/301 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 --EHTHITDQPEDYEVEAGQSAT---FRCNAVSDPSLKLS-----IVWLR--GSEPIDFE 353
                   ++P  +    G ++     R N +S   +        I W +  G  P +  
Sbjct: 238 VISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKN-- 295

Query: 354 SEPRFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFT 409
              R V  N + +L +   SE DSG Y C A+  L  I    ++ V+     + AP N  
Sbjct: 296 ---RTVYKNFEKTLQIIHVSEADSGNYQCVAKNALGAIHHTISVRVKAAPYWITAPQNLV 352

Query: 410 L 410
           L
Sbjct: 353 L 353



 Score = 40.0 bits (92), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWI 253
           + C   ++L        +  L   P IT+    +Y +D +  +V+ C   G P P  +W 
Sbjct: 22  FLCQMISALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWT 81

Query: 254 HNQKELTGGRYTILE----TGDLKITDVAFADS----GEYTCFARNKLGTAQGSGSLTVK 305
            N       +  ++     TG L I  ++   +    G Y C ARN+ G A  +  +   
Sbjct: 82  RNGTHFDIDKDPLVTMKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRP 141

Query: 306 EHTHI--TDQPEDYEVEAGQSATFRC 329
             + +   ++ E   +++GQS    C
Sbjct: 142 SRSPLWTKEKLEPITLQSGQSLVLPC 167


>gi|221042958|dbj|BAH13156.1| unnamed protein product [Homo sapiens]
          Length = 1153

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 166/523 (31%), Positives = 242/523 (46%), Gaps = 36/523 (6%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  + P +R    N+ K+L I HV  +D G+Y C
Sbjct: 283 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIIHVSEADSGNYQC 340

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+   P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 341 IAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 399

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 400 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 459

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 460 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 519

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 520 TGTYTCVARNKLGMAKNEVHLEIKDATWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTV 579

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  S+ RF    D+ L V   S+ DSG YTC A T LD + A A L+V  P
Sbjct: 580 LWLKDNR--ELPSDERFTVDKDH-LVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAP 636

Query: 402 LEAPS----------NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGS 451
              P+          +  L   +D K   +SW P    +       + ++        G 
Sbjct: 637 TPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWTPGDDNN--SPITKFIIEYEDAMHKPGL 693

Query: 452 IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPGT 506
                   G  TT ++ K  P      RV+A N      PSE     +     P+  P  
Sbjct: 694 WHHQTEVSGTQTTAQL-KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTA 752

Query: 507 VQSLEAIPLGSSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
           V+ L + P       + W KP    + NG  + YK+ ++   G
Sbjct: 753 VEGLGSEP---DNLVITW-KPLNGFESNGPGLQYKVSWRQKDG 791



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 147/566 (25%), Positives = 232/566 (40%), Gaps = 62/566 (10%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W    K     P N  R V  N    + I ++ ++D+GNY C A
Sbjct: 288 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 342

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QK 257
            N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 343 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 401

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N+ G    +  + V         P +
Sbjct: 402 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPAN 461

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + + 
Sbjct: 462 TLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKD 518

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
            +G YTC A+ +L   + +  L ++       + T I V   + AVV          RG 
Sbjct: 519 STGTYTCVARNKLGMAKNEVHLEIK-------DATWI-VKQPEYAVVQ---------RGS 561

Query: 435 FRGYKVQTWTEKDGEGSIRELIVNK----GESTTTEVDKFVPASKNFARVLAFNGAYNG- 489
              ++ +   +     ++  L  N+     E  T + D  V A  +      +    N  
Sbjct: 562 MVSFECKVKHDHTLSLTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDSGTYTCVANTT 621

Query: 490 ----PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYK 538
                 S ++S V P   P  V  +   P           +  L W   +  N  +  + 
Sbjct: 622 LDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFI 681

Query: 539 IKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AES 594
           I+Y+        P L         T T+A+L  L P   Y   +      G      A  
Sbjct: 682 IEYEDAMHK---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNSIGKSLPSEASE 737

Query: 595 KYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
           +YL     P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W  
Sbjct: 738 QYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS 797

Query: 653 DDVLDWRQSELVLANQPTFQPYEIKV 678
             V+    S+ +++  PTF PY IKV
Sbjct: 798 --VVVANVSKYIVSGTPTFVPYLIKV 821



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 844  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 902

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 903  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 962

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 963  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 1018

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1019 NFSTRYKFYFYAQTSAGSGSQ 1039



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 138/605 (22%), Positives = 226/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 380 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 436 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 493

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +   A  I + 
Sbjct: 494 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDATWIVKQ 551

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 552 PEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDS 611

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 612 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 666

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 667 WTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 726

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 727 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 785

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 786 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDMGFAPEPAVVMGHSGE 842

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 843 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 902

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 903 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 955

Query: 616 NNLVI 620
           ++L I
Sbjct: 956 SSLKI 960



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 126/315 (40%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 E------HTHITDQPEDYEVEAGQSATFR--------CNAVSDPSLKLSIVWLRG----- 346
                  +  I     D E    +S+  R         NA +   L+ +++ L       
Sbjct: 238 VISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGL 297

Query: 347 SEPIDFESEP-------RFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             PI + ++        R V  N + +L +   SE DSG Y C A+  L  I    ++ V
Sbjct: 298 PTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRV 357

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 358 KAAPYWITAPQNLVL 372



 Score = 40.0 bits (92), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWI 253
           + C   ++L        +  L   P IT+    +Y +D +  +V+ C   G P P  +W 
Sbjct: 22  FLCQMISALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWT 81

Query: 254 HNQKELTGGRYTILE----TGDLKITDVAFADS----GEYTCFARNKLGTAQGSGSLTVK 305
            N       +  ++     TG L I  ++   +    G Y C ARN+ G A  +  +   
Sbjct: 82  RNGTHFDIDKDPLVTMKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRP 141

Query: 306 EHTHI--TDQPEDYEVEAGQSATFRC 329
             + +   ++ E   +++GQS    C
Sbjct: 142 SRSPLWTKEKLEPITLQSGQSLVLPC 167


>gi|387539242|gb|AFJ70248.1| neurofascin isoform 1 precursor [Macaca mulatta]
          Length = 1238

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 252 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 310

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 311 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 369

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 370 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 429

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 430 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 488

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 489 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 548

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 549 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 605

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 606 YLTVLADQATPTN 618



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 155/666 (23%), Positives = 261/666 (39%), Gaps = 77/666 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 167 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 225

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 226 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 283

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 284 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 339

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 340 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 397

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 398 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 457

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 458 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 516

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIREL 455
            V+ P       T I  +   +       V  +    H    K+  +W + D    I   
Sbjct: 517 EVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNR 569

Query: 456 IVNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
           +  + +S T                 TE+D+ +  +K +  VLA       P + + +  
Sbjct: 570 MKKEDDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLADQAT---PTNRLAAL- 623

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
            P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   Y
Sbjct: 624 -PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKY 681

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRG 612
              P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G
Sbjct: 682 ---PGSVNSAVLRLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPGDVKGEG 738

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
           +  NN+ I+WT M       P+ +Y + WRR  T EAWN  +V  W  S  V+   P + 
Sbjct: 739 TRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQTPVYV 795

Query: 673 PYEIKV 678
           PYEI+V
Sbjct: 796 PYEIRV 801



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 57  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 116

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 117 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 176

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK---- 305
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K    
Sbjct: 177 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 236

Query: 306 ----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
               E T     P+       V  G      C A   P+    I W +     D  S+  
Sbjct: 237 RGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 292

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 293 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 348



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 9/172 (5%)

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           ++W P++  S  G    Y V+ W  ++   +   + V        +   +VP      RV
Sbjct: 746 ITWTPMNATSAFGPNLRYIVK-WRRRETREAWNNVTVWGSRYVVGQTPVYVPYE---IRV 801

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
            A N    GP  E +   + E +P   +             L+W  PE PNG++ GY +K
Sbjct: 802 QAENDFGKGPEPESVIGYSGEDLPSAPRRFRVRQPNLETINLEWDHPEHPNGIMTGYTLK 861

Query: 541 YQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           Y +  GTKVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 862 YVAFNGTKVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 909



 Score = 47.4 bits (111), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++  
Sbjct: 35  NELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 94

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
                + D           GEY CFARNK GTA     L+ +    ++  P    E+ + 
Sbjct: 95  RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 149

Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 150 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 205

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
           D    Y+C A+      I+ +   T++V
Sbjct: 206 DMQTDYSCNARFHFTHTIQQKNPFTLKV 233


>gi|297681293|ref|XP_002818392.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Pongo abelii]
          Length = 1180

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 174/550 (31%), Positives = 256/550 (46%), Gaps = 43/550 (7%)

Query: 24  ISASQNRHAPK-----QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPS 77
           ISA  +R  P      +   + K+E  LR   + L CI  G P P   W+K DG  + P 
Sbjct: 239 ISAKSSRERPPTFLTPEGNASNKEE--LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPK 294

Query: 78  DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINA 137
           +R    N+ K+L I HV  +D G+Y C   N +G A  ++I + V AAPY+   P+ +  
Sbjct: 295 NRTVYKNFEKTLQIIHVSEADSGNYQCVAKNALG-AIHHTISVRVKAAPYWITAPQNLVL 353

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  E  T  C+A+G P+P I W+ NG PI  AP +P RK+  + I   N+++  +  Y C
Sbjct: 354 SPGEDGTLICRANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQC 413

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQ 256
           NA+N  GY+  + +VNVLA  P I       Y V   +  +L C  FG+P P + W    
Sbjct: 414 NASNDYGYLLANAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGA 473

Query: 257 K--ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
           K   L    Y + E G L+I       +G YTC ARNKLG A+    L +K+ T I  QP
Sbjct: 474 KGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQP 533

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           E   V+ G   +F C    D +L L+++WL+ +   +  S+ RF    D+ L V   S+ 
Sbjct: 534 EYAVVQRGSMVSFECKVKHDHTLILTVLWLKDNR--ELPSDERFTVDKDH-LVVADVSDD 590

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPS----------NFTLIQVIDAKKAVVSWN 424
           DSG YTC A T LD + A A L+V  P   P+          +  L   +D K   +SW 
Sbjct: 591 DSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWT 649

Query: 425 PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN 484
           P    +       + ++        G         G  TT ++ K  P      RV+A N
Sbjct: 650 PGDDNN--SPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQL-KLSPYVNYSFRVMAVN 706

Query: 485 GAYNGPPSEII-SFVT----PEGVPGTVQSLEAIPLGSSAFYLKWVKPE---QPNGVLMG 536
                 PSE+   ++T    P+  P  V+ L + P       + W KP    + NG  + 
Sbjct: 707 SIGKSLPSEVSEQYLTKASEPDKNPTAVEGLGSEP---DNLVITW-KPLNGFESNGPGLQ 762

Query: 537 YKIKYQSVKG 546
           YK+ ++   G
Sbjct: 763 YKVSWRQKDG 772



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 163/642 (25%), Positives = 262/642 (40%), Gaps = 70/642 (10%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTC--EVSNGVGEAKSYSIDLSVLAA------PYF 128
           S+R+SQG  G       +    +  Y C    ++     +   I + V++A      P  
Sbjct: 191 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISAKSSRERPPT 250

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---R 181
            + PE   + +EE     ++ EC A GLP P I+W    K     P N  R V  N    
Sbjct: 251 FLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKT 305

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR 241
           + I ++ ++D+GNY C A N+LG ++  + V V A AP    AP++     G+   L CR
Sbjct: 306 LQIIHVSEADSGNYQCVAKNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICR 364

Query: 242 VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQG 298
             G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N  G    
Sbjct: 365 ANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNDYGYLLA 424

Query: 299 SGSLTVKEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           +  + V         P +  Y+V A + A   C     P    +I W +G++      E 
Sbjct: 425 NAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-ED 481

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP--LEAPSNFTLIQVI 414
            +V   + +L +  + +  +G YTC A+ +L   + +  L ++ P  +     + ++Q  
Sbjct: 482 IYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQ-- 539

Query: 415 DAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
             + ++VS+     +    H     +     KD     REL  +  E  T + D  V A 
Sbjct: 540 --RGSMVSF-----ECKVKHDHTLILTVLWLKDN----RELPSD--ERFTVDKDHLVVAD 586

Query: 475 KNFARVLAFNGAYNG-----PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYL 522
            +      +    N        S ++S V P   P  V  +   P           +  L
Sbjct: 587 VSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQL 646

Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
            W   +  N  +  + I+Y+        P L         T T+A+L  L P   Y   +
Sbjct: 647 SWTPGDDNNSPITKFIIEYEDAMHE---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRV 702

Query: 583 AGYTKAGDGAES----KYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
                 G    S    +YL     P KNP  VEG GS P+NLVI+W  +   E N P  +
Sbjct: 703 MAVNSIGKSLPSEVSEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQ 762

Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           Y++ WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 763 YKVSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 802



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 825  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 883

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 884  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 943

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 944  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 999

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1000 NFSTRYKFYFYAQTSAGSGSQ 1020



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 137/605 (22%), Positives = 224/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 361 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 416

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 417 NDYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 474

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 475 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIVKQ 532

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 533 PEYAVVQRGSMVSFECKVKHDHTLILTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDS 592

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 593 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 647

Query: 343 WLRGSE---PI--------DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           W  G +   PI        D   EP              +++L    Y   +   +    
Sbjct: 648 WTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 707

Query: 392 AQATLTVQV-------PLEAPSNFTLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
              +L  +V         E   N T ++ + ++    V++W P++     G    YKV +
Sbjct: 708 IGKSLPSEVSEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 766

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 767 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAVVMGHSGE 823

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 824 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 883

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 884 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 936

Query: 616 NNLVI 620
           ++L I
Sbjct: 937 SSLKI 941



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 122/301 (40%), Gaps = 40/301 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 --EHTHITDQPEDYEVEAGQSAT---FRCNAVSDPSLKLS-----IVWLR--GSEPIDFE 353
                   ++P  +    G ++     R N +S   +        I W +  G  P +  
Sbjct: 238 VISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKN-- 295

Query: 354 SEPRFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFT 409
              R V  N + +L +   SE DSG Y C A+  L  I    ++ V+     + AP N  
Sbjct: 296 ---RTVYKNFEKTLQIIHVSEADSGNYQCVAKNALGAIHHTISVRVKAAPYWITAPQNLV 352

Query: 410 L 410
           L
Sbjct: 353 L 353



 Score = 40.0 bits (92), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWI 253
           + C   ++L        +  L   P IT+    +Y +D +  +V+ C   G P P  +W 
Sbjct: 22  FLCQMISALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWT 81

Query: 254 HNQKELTGGRYTILE----TGDLKITDVAFADS----GEYTCFARNKLGTAQGSGSLTVK 305
            N       +  ++     TG L I  ++   +    G Y C ARN+ G A  +  +   
Sbjct: 82  RNGTHFDIDKDPLVTMKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRP 141

Query: 306 EHTHI--TDQPEDYEVEAGQSATFRC 329
             + +   ++ E   +++GQS    C
Sbjct: 142 SRSPLWTKEKLEPITLQSGQSLVLPC 167


>gi|237858675|ref|NP_001005388.2| neurofascin isoform 1 precursor [Homo sapiens]
 gi|115527434|gb|AAI17675.2| NFASC protein [Homo sapiens]
 gi|219520716|gb|AAI44455.1| Unknown (protein for MGC:177997) [Homo sapiens]
          Length = 1240

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 192/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 252 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 310

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 311 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 369

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 370 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 429

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 430 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 488

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED     G +    C    D
Sbjct: 489 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHD 548

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 549 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 605

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 606 YLTVLADQATPTN 618



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 155/666 (23%), Positives = 261/666 (39%), Gaps = 77/666 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 167 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 225

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 226 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 283

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 284 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 339

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 340 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 397

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 398 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 457

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 458 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 516

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIREL 455
            V+ P       T I  +   +       V  +    H    K+  +W + D    I   
Sbjct: 517 EVKDP-------TRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNR 569

Query: 456 IVNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
           +  + +S T                 TE+D+ +  +K +  VLA       P + + +  
Sbjct: 570 MKKEDDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLADQAT---PTNRLAAL- 623

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
            P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   Y
Sbjct: 624 -PKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQ-FQPGVWHDHSKY 681

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRG 612
              P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G
Sbjct: 682 ---PGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEG 738

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
           +  NN+ I+WT M       P+ +Y + WRR  T EAWN  +V  W  S  V+   P + 
Sbjct: 739 TRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQTPVYV 795

Query: 673 PYEIKV 678
           PYEI+V
Sbjct: 796 PYEIRV 801



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 9/172 (5%)

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           ++W P++  S  G    Y V+ W  ++   +   + V        +   +VP      RV
Sbjct: 746 ITWTPMNATSAFGPNLRYIVK-WRRRETREAWNNVTVWGSRYVVGQTPVYVPYE---IRV 801

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
            A N    GP  E +   + E +P   +             L+W  PE PNG+++GY +K
Sbjct: 802 QAENDFGKGPEPESVIGYSGEDLPSAPRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLK 861

Query: 541 YQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           Y +  GTKVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 862 YVAFNGTKVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 909



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 57  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 116

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 117 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 176

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK---- 305
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K    
Sbjct: 177 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 236

Query: 306 ----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
               E T     P+       V  G      C A   P+    I W +     D  S+  
Sbjct: 237 RGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 292

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 293 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 348



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++  
Sbjct: 35  NELTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 94

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
                + D           GEY CFARNK GTA     L+ +    ++  P    E+ + 
Sbjct: 95  RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 149

Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 150 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 205

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
           D    Y+C A+      I+ +   T++V
Sbjct: 206 DMQTDYSCNARFHFTHTIQQKNPFTLKV 233


>gi|77681487|ref|NP_001029334.1| neuronal cell adhesion molecule precursor [Pan troglodytes]
 gi|56122350|gb|AAV74326.1| neuronal cell adhesion protein [Pan troglodytes]
          Length = 1180

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 147/421 (34%), Positives = 210/421 (49%), Gaps = 28/421 (6%)

Query: 24  ISASQNRHAPK-----QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPS 77
           ISA  +R  P      +   + K+E  LR   + L CI  G P P   W+K DG  + P 
Sbjct: 239 ISAKSSRERPPTFLTPEGNASNKEE--LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPK 294

Query: 78  DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINA 137
           +R    N+ K+L I HV  +D G+Y C   N +G A  ++I + V AAPY+   P+ +  
Sbjct: 295 NRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALG-AIHHTISVRVKAAPYWITAPQNLVL 353

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  E  T  C+A+G P+P I W+ NG PI  AP +P RK+  + I   N+++  +  Y C
Sbjct: 354 SPGEDGTLICRANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQC 413

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQ 256
           NA+N  GY+  + +VNVLA  P I       Y V   +  +L C  FG+P P + W    
Sbjct: 414 NASNEYGYLLANAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGA 473

Query: 257 K--ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
           K   L    Y + E G L+I       +G YTC ARNKLG A+    L +K+ T I  QP
Sbjct: 474 KGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQP 533

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           E   V+ G   +F C    D +L L+++WL+ +   +  S+ RF    D+ L V   S+ 
Sbjct: 534 EYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNR--ELPSDERFTVDKDH-LVVADVSDD 590

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPS----------NFTLIQVIDAKKAVVSWN 424
           DSG YTC A T LD + A A L+V  P   P+          +  L   +D K   +SW 
Sbjct: 591 DSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWT 649

Query: 425 P 425
           P
Sbjct: 650 P 650



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 163/642 (25%), Positives = 263/642 (40%), Gaps = 70/642 (10%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTC--EVSNGVGEAKSYSIDLSVLAA------PYF 128
           S+R+SQG  G       +    +  Y C    ++     +   I + V++A      P  
Sbjct: 191 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISAKSSRERPPT 250

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---R 181
            + PE   + +EE     ++ EC A GLP P I+W    K     P N  R V  N    
Sbjct: 251 FLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKT 305

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR 241
           + I ++ ++D+GNY C A N+LG ++  + V V A AP    AP++     G+   L CR
Sbjct: 306 LQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICR 364

Query: 242 VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQG 298
             G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    
Sbjct: 365 ANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLA 424

Query: 299 SGSLTVKEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           +  + V         P +  Y+V A + A   C     P    +I W +G++      E 
Sbjct: 425 NAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-ED 481

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP--LEAPSNFTLIQVI 414
            +V   + +L +  + +  +G YTC A+ +L   + +  L ++ P  +     + ++Q  
Sbjct: 482 IYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQ-- 539

Query: 415 DAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
             + ++VS+     +    H     +     KD     REL  +  E  T + D  V A 
Sbjct: 540 --RGSMVSF-----ECKVKHDHTLSLTVLWLKDN----RELPSD--ERFTVDKDHLVVAD 586

Query: 475 KNFARVLAFNGAYNG-----PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYL 522
            +      +    N        S ++S V P   P  V  +   P           +  L
Sbjct: 587 VSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQL 646

Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
            W   +  N  +  + I+Y+        P L         T T+A+L  L P   Y   +
Sbjct: 647 SWTPGDDNNSPITKFIIEYEDAMHE---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRV 702

Query: 583 AGYTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
                 G      A  +YL     P KNP  VEG GS P+NLVI+W  +   E N P  +
Sbjct: 703 MAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQ 762

Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           Y++ WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 763 YKVSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 802



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 825  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 883

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 884  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 943

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 944  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 999

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1000 NFSTRYKFYFYAQTSAGSGSQ 1020



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 137/605 (22%), Positives = 225/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 361 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 416

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 417 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 474

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 475 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIVKQ 532

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 533 PEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDS 592

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 593 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 647

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 648 WTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 707

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 708 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 766

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 767 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDMGFAPEPAVVMGHSGE 823

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 824 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 883

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 884 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 936

Query: 616 NNLVI 620
           ++L I
Sbjct: 937 SSLKI 941



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 122/301 (40%), Gaps = 40/301 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 --EHTHITDQPEDYEVEAGQSAT---FRCNAVSDPSLKLS-----IVWLR--GSEPIDFE 353
                   ++P  +    G ++     R N +S   +        I W +  G  P +  
Sbjct: 238 VISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKN-- 295

Query: 354 SEPRFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFT 409
              R V  N + +L +   SE DSG Y C A+  L  I    ++ V+     + AP N  
Sbjct: 296 ---RTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLV 352

Query: 410 L 410
           L
Sbjct: 353 L 353



 Score = 40.0 bits (92), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWI 253
           + C   ++L        +  L   P IT+    +Y +D +  +V+ C   G P P  +W 
Sbjct: 22  FLCQMISALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWT 81

Query: 254 HNQKELTGGRYTILE----TGDLKITDVAFADS----GEYTCFARNKLGTAQGSGSLTVK 305
            N       +  ++     TG L I  ++   +    G Y C ARN+ G A  +  +   
Sbjct: 82  RNGTHFDIDKDPLVTMKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRP 141

Query: 306 EHTHI--TDQPEDYEVEAGQSATFRC 329
             + +   ++ E   +++GQS    C
Sbjct: 142 SRSPLWTKEKLEPITLQSGQSLVLPC 167


>gi|119611933|gb|EAW91527.1| hCG16415, isoform CRA_d [Homo sapiens]
          Length = 603

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 192/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 6   TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 64

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 65  SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 123

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 124 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 183

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 184 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 242

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED     G +    C    D
Sbjct: 243 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHD 302

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 303 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 359

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 360 YLTVLADQATPTN 372



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 136/566 (24%), Positives = 226/566 (39%), Gaps = 58/566 (10%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATN 201
           +  EC ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N
Sbjct: 18  LLLECIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASN 74

Query: 202 SLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG 261
            +G +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L  
Sbjct: 75  KMGSIRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQS 133

Query: 262 G-----RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
                 R    +T  +   D   +    Y C   N+ G    +  ++V +       P +
Sbjct: 134 APPNPNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRN 191

Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
             +        R +     S   ++ W +  +  + +     V  N  SL +    + D 
Sbjct: 192 QLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQ 250

Query: 377 GQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR 436
           G YTC A   L   E Q  L V+ P       T I  +   +       V  +    H  
Sbjct: 251 GIYTCVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVARRGTTVQLECRVKHDP 303

Query: 437 GYKVQ-TWTEKDGEGSIRELIVNKGESTT-----------------TEVDKFVPASKNFA 478
             K+  +W + D    I   +  + +S T                 TE+D+ +  +K + 
Sbjct: 304 SLKLTVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYL 361

Query: 479 RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
            VLA       P + + +   P+G P   + LE   L   +  L W+  +  N  +  Y 
Sbjct: 362 TVLADQAT---PTNRLAAL--PKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYV 416

Query: 539 IKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES---- 594
           ++++  +  + G   +   Y   P + ++ +  L P   Y+  +    + G    S    
Sbjct: 417 VQFEEDQ-FQPGVWHDHSKY---PGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSE 472

Query: 595 --KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
             +     P  NP +V+G G+  NN+ I+WT M       P+ +Y + WRR  T EAWN 
Sbjct: 473 RYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN- 531

Query: 653 DDVLDWRQSELVLANQPTFQPYEIKV 678
            +V  W  S  V+   P + PYEI+V
Sbjct: 532 -NVTVW-GSRYVVGQTPVYVPYEIRV 555


>gi|302191651|ref|NP_001180513.1| neuronal cell adhesion molecule isoform F precursor [Homo sapiens]
          Length = 1180

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 147/421 (34%), Positives = 210/421 (49%), Gaps = 28/421 (6%)

Query: 24  ISASQNRHAPK-----QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPS 77
           ISA  +R  P      +   + K+E  LR   + L CI  G P P   W+K DG  + P 
Sbjct: 239 ISAKSSRERPPTFLTPEGNASNKEE--LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPK 294

Query: 78  DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINA 137
           +R    N+ K+L I HV  +D G+Y C   N +G A  ++I + V AAPY+   P+ +  
Sbjct: 295 NRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALG-AIHHTISVRVKAAPYWITAPQNLVL 353

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  E  T  C+A+G P+P I W+ NG PI  AP +P RK+  + I   N+++  +  Y C
Sbjct: 354 SPGEDGTLICRANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQC 413

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQ 256
           NA+N  GY+  + +VNVLA  P I       Y V   +  +L C  FG+P P + W    
Sbjct: 414 NASNEYGYLLANAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGA 473

Query: 257 K--ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
           K   L    Y + E G L+I       +G YTC ARNKLG A+    L +K+ T I  QP
Sbjct: 474 KGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQP 533

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           E   V+ G   +F C    D +L L+++WL+ +   +  S+ RF    D+ L V   S+ 
Sbjct: 534 EYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNR--ELPSDERFTVDKDH-LVVADVSDD 590

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPS----------NFTLIQVIDAKKAVVSWN 424
           DSG YTC A T LD + A A L+V  P   P+          +  L   +D K   +SW 
Sbjct: 591 DSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWT 649

Query: 425 P 425
           P
Sbjct: 650 P 650



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 163/642 (25%), Positives = 263/642 (40%), Gaps = 70/642 (10%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTC--EVSNGVGEAKSYSIDLSVLAA------PYF 128
           S+R+SQG  G       +    +  Y C    ++     +   I + V++A      P  
Sbjct: 191 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISAKSSRERPPT 250

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---R 181
            + PE   + +EE     ++ EC A GLP P I+W    K     P N  R V  N    
Sbjct: 251 FLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKT 305

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR 241
           + I ++ ++D+GNY C A N+LG ++  + V V A AP    AP++     G+   L CR
Sbjct: 306 LQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICR 364

Query: 242 VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQG 298
             G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    
Sbjct: 365 ANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLA 424

Query: 299 SGSLTVKEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           +  + V         P +  Y+V A + A   C     P    +I W +G++      E 
Sbjct: 425 NAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-ED 481

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP--LEAPSNFTLIQVI 414
            +V   + +L +  + +  +G YTC A+ +L   + +  L ++ P  +     + ++Q  
Sbjct: 482 IYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQ-- 539

Query: 415 DAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
             + ++VS+     +    H     +     KD     REL  +  E  T + D  V A 
Sbjct: 540 --RGSMVSF-----ECKVKHDHTLSLTVLWLKDN----RELPSD--ERFTVDKDHLVVAD 586

Query: 475 KNFARVLAFNGAYNG-----PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYL 522
            +      +    N        S ++S V P   P  V  +   P           +  L
Sbjct: 587 VSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQL 646

Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
            W   +  N  +  + I+Y+        P L         T T+A+L  L P   Y   +
Sbjct: 647 SWTPGDDNNSPITKFIIEYEDAMHK---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRV 702

Query: 583 AGYTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
                 G      A  +YL     P KNP  VEG GS P+NLVI+W  +   E N P  +
Sbjct: 703 MAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQ 762

Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           Y++ WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 763 YKVSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 802



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 825  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 883

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 884  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 943

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 944  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 999

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1000 NFSTRYKFYFYAQTSAGSGSQ 1020



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 137/605 (22%), Positives = 225/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 361 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 416

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 417 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 474

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 475 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIVKQ 532

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 533 PEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDS 592

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 593 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 647

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 648 WTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 707

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 708 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 766

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 767 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDMGFAPEPAVVMGHSGE 823

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 824 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 883

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 884 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 936

Query: 616 NNLVI 620
           ++L I
Sbjct: 937 SSLKI 941



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 122/301 (40%), Gaps = 40/301 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 --EHTHITDQPEDYEVEAGQSAT---FRCNAVSDPSLKLS-----IVWLR--GSEPIDFE 353
                   ++P  +    G ++     R N +S   +        I W +  G  P +  
Sbjct: 238 VISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKN-- 295

Query: 354 SEPRFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFT 409
              R V  N + +L +   SE DSG Y C A+  L  I    ++ V+     + AP N  
Sbjct: 296 ---RTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLV 352

Query: 410 L 410
           L
Sbjct: 353 L 353



 Score = 40.0 bits (92), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWI 253
           + C   ++L        +  L   P IT+    +Y +D +  +V+ C   G P P  +W 
Sbjct: 22  FLCQMISALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWT 81

Query: 254 HNQKELTGGRYTILE----TGDLKITDVAFADS----GEYTCFARNKLGTAQGSGSLTVK 305
            N       +  ++     TG L I  ++   +    G Y C ARN+ G A  +  +   
Sbjct: 82  RNGTHFDIDKDPLVTMKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRP 141

Query: 306 EHTHI--TDQPEDYEVEAGQSATFRC 329
             + +   ++ E   +++GQS    C
Sbjct: 142 SRSPLWTKEKLEPITLQSGQSLVLPC 167


>gi|237858677|ref|NP_001153803.1| neurofascin isoform 2 precursor [Homo sapiens]
          Length = 1189

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 192/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 263 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 321

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 322 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 380

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 381 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 440

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 441 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 499

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED     G +    C    D
Sbjct: 500 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHD 559

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 560 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 616

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 617 YLTVLADQATPTN 629



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 160/682 (23%), Positives = 266/682 (39%), Gaps = 92/682 (13%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 220 KNPFTLKV-LTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLE 278

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 279 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 335

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 336 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 394

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 395 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 452

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 453 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 511

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 512 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVARRGTTVQLECRVKHDPSLKL 564

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTT-----------------TEVDKFVPASKNFARVLA 482
             +W + D    I   +  + +S T                 TE+D+ +  +K +  VLA
Sbjct: 565 TVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLA 622

Query: 483 FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
                  P + + +   P+G P   + LE   L   +  L W+  +  N  +  Y ++++
Sbjct: 623 DQAT---PTNRLAAL--PKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVVQFE 677

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KY 596
             +  + G   +   Y   P + ++ +  L P   Y+  +    + G    S      + 
Sbjct: 678 EDQ-FQPGVWHDHSKY---PGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRT 733

Query: 597 LFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVL 656
               P  NP +V+G G+  NN+ I+WT M       P+ +Y + WRR  T EAWN  +V 
Sbjct: 734 SGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVT 791

Query: 657 DWRQSELVLANQPTFQPYEIKV 678
            W  S  V+   P + PYEI+V
Sbjct: 792 VW-GSRYVVGQTPVYVPYEIRV 812



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     +V        P  AP+    ++V+++    + WN V   +++
Sbjct: 808  YEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVK-VRVMNSTAISLQWNRVYSDTVQ 866

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 867  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRG 926

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+++GY +KY +  GT
Sbjct: 927  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLKYVAFNGT 986

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            KVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 987  KVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 1027



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 120/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 230

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 231 HPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PD 288

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 289 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 346

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 347 APYWLDEPKNLIL 359



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 29/213 (13%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQVPLEAPSN 407
              Y+C A+      I+ +   T++V    P N
Sbjct: 202 QTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN 234


>gi|119603834|gb|EAW83428.1| neuronal cell adhesion molecule, isoform CRA_b [Homo sapiens]
          Length = 1305

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/394 (35%), Positives = 199/394 (50%), Gaps = 21/394 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  + P +R    N+ K+L I HV  +D G+Y C
Sbjct: 277 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIIHVSEADSGNYQC 334

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+   P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 335 IAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 393

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 394 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 453

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 454 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 513

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 514 TGTYTCVARNKLGMAKNEVHLEIKDATWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTV 573

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  S+ RF    D+ L V   S+ DSG YTC A T LD + A A L+V  P
Sbjct: 574 LWLKDNR--ELPSDERFTVDKDH-LVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAP 630

Query: 402 LEAPS----------NFTLIQVIDAKKAVVSWNP 425
              P+          +  L   +D K   +SW P
Sbjct: 631 TPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWTP 663



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 148/562 (26%), Positives = 229/562 (40%), Gaps = 54/562 (9%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W    K     P N  R V  N    + I ++ ++D+GNY C A
Sbjct: 282 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 336

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK-- 257
            N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 337 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 395

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N+ G    +  + V         P +
Sbjct: 396 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPAN 455

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + + 
Sbjct: 456 TLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKD 512

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
            +G YTC A+ +L   + +  L ++       + T I        V   + VS +    H
Sbjct: 513 STGTYTCVARNKLGMAKNEVHLEIK-------DATWIVKQPEYAVVQRGSMVSFECKVKH 565

Query: 435 FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG----- 489
                +     KD     REL  +  E  T + D  V A  +      +    N      
Sbjct: 566 DHTLSLTVLWLKDN----RELPSD--ERFTVDKDHLVVADVSDDDSGTYTCVANTTLDSV 619

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIKYQ 542
             S ++S V P   P  V  +   P           +  L W   +  N  +  + I+Y+
Sbjct: 620 SASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYE 679

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLF 598
                   P L         T T+A+L  L P   Y   +      G      A  +YL 
Sbjct: 680 DAMHK---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNSIGKSLPSEASEQYLT 735

Query: 599 YV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVL 656
               P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W    V+
Sbjct: 736 KASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS--VV 793

Query: 657 DWRQSELVLANQPTFQPYEIKV 678
               S+ +++  PTF PY IKV
Sbjct: 794 VANVSKYIVSGTPTFVPYLIKV 815



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 19/208 (9%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGY------------KVQTWTEKD 447
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY            K Q+ ++++
Sbjct: 838  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRASERGPFIYYWKTQSSSKRN 896

Query: 448  GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV 507
                 ++++  +G  T   +    P S     V   NG   GP S    F TPEGVP   
Sbjct: 897  RRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAP 956

Query: 508  QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTT 565
             SL+ +     +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T
Sbjct: 957  SSLKIVNPTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIP----ANKT 1012

Query: 566  SAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
               L  L  ST+Y+ +    T AG G++
Sbjct: 1013 RWTLKNLNFSTRYKFYFYAQTSAGSGSQ 1040



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 134/344 (38%), Gaps = 57/344 (16%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNG-------K 164
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  ISALEVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKD 86

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDT--GNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           P+    P      G   I I +  K++T  G Y C A N  G    +  V   + +P  T
Sbjct: 87  PLVTMKPG----TGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWT 142

Query: 223 EAPKDEYTVD-GKTVVLTCRVFGAPKPEVN-WIHN--QKELTGGRYTILETGDLKITDVA 278
           +   +  T+  G+++VL CR      P +  W+ N  Q+     R +    GDL  ++V 
Sbjct: 143 KEKLEPITLQSGQSLVLPCRPPIGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVL 202

Query: 279 FADSGE-YTCFAR-NKLGTAQGSGSLTVKE------HTHITDQPEDYEVEAGQSATFR-- 328
             D+ E Y C+AR N   T Q    ++VK       +  I     D E    +S+  R  
Sbjct: 203 PEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFYGAKSSRERPP 262

Query: 329 ------CNAVSDPSLKLSIVWLRG-----SEPIDFESEP-------RFVQSN-DYSLTVT 369
                  NA +   L+ +++ L         PI + ++        R V  N + +L + 
Sbjct: 263 TFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQII 322

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             SE DSG Y C A+  L  I    ++ V+     + AP N  L
Sbjct: 323 HVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLVL 366


>gi|432862638|ref|XP_004069954.1| PREDICTED: neuronal cell adhesion molecule-like [Oryzias latipes]
          Length = 1176

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 165/526 (31%), Positives = 251/526 (47%), Gaps = 30/526 (5%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           PK ++ ++   V LR  K+++ CI  G P P+  W+KDG  + P+ R S   + K+L I 
Sbjct: 257 PKDRHSSK---VVLRGHKLDMECIAEGRPTPEISWTKDGS-VLPAGRTSFLQFNKTLQID 312

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASG 151
            V  S++G Y C  +N  G    ++  ++V AAPY+ +  P  +  +  E     C+ASG
Sbjct: 313 DVSDSEEGVYRCTATNKFGSVH-HTFHVTVKAAPYWISGPPSNLVLSPGENGMLTCRASG 371

Query: 152 LPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVY 211
            P+P I W  N  PI     +   KV  + I   +++ S++  Y CN +N  GY+  + +
Sbjct: 372 KPKPLIRWTKNVMPIETGLEDDTMKVEDDMIIFRDVKTSNSAVYQCNVSNEFGYLLANAF 431

Query: 212 VNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILE 268
           VNVL+  P +      +Y V      +L C  FG+P P + W  + +   L G  Y + +
Sbjct: 432 VNVLSEPPRVLTPVNKKYEVIRNHRAMLDCSFFGSPIPNITWFKDSRSSTLDGDSYALHD 491

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
            G L+I      DSG+YTC ARN LG  +    L VKE TH   QPE   ++ G+S TF 
Sbjct: 492 NGTLEIRISRPRDSGKYTCVARNILGIFENHVFLEVKEPTHFLKQPEYQVIKRGRSVTFE 551

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C    D SL  ++ WL+  E  +   + RFV   + SLT+T   + D+G YTC   T LD
Sbjct: 552 CKVKHDSSLTATMTWLKDDE--ELPDDDRFVVGAE-SLTITNVVDSDAGMYTCIMNTTLD 608

Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKK--AVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
            + A A LTV   +E P   T +++ D  K   V++W P +      H + + +Q     
Sbjct: 609 HVSASAELTV---VERPDPPTDLELTDQTKRSVVLTWIPGN--EYNSHIKNFLIQYEDSL 663

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNG-AYNGP--PSEIISF--VTPE 501
              G    L    G  T+  + K  P      RVLA N   ++ P  PS++       P+
Sbjct: 664 HHRGHWHNLTHVPGTKTSAHL-KLSPHVHYTFRVLALNDVGWSQPSNPSQMYKTDPAAPD 722

Query: 502 GVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
             P  VQ L   P   +   + W  +   Q NG  + YK+ Y+  K
Sbjct: 723 ENPTGVQGLGTEP---NNLIISWKPLTKLQSNGPGLHYKVMYREKK 765



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 146/556 (26%), Positives = 220/556 (39%), Gaps = 51/556 (9%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATN 201
           +  EC A G P PEI W  +G   S  P      +  N+ + I+++  S+ G Y C ATN
Sbjct: 272 LDMECIAEGRPTPEISWTKDG---SVLPAGRTSFLQFNKTLQIDDVSDSEEGVYRCTATN 328

Query: 202 SLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG 261
             G V+   +V V A    I+  P +     G+  +LTCR  G PKP + W  N   +  
Sbjct: 329 KFGSVHHTFHVTVKAAPYWISGPPSNLVLSPGENGMLTCRASGKPKPLIRWTKNVMPIET 388

Query: 262 GRYTILETGDLKI-------TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITD 312
           G    LE   +K+        DV  ++S  Y C   N+ G    +  + V       +T 
Sbjct: 389 G----LEDDTMKVEDDMIIFRDVKTSNSAVYQCNVSNEFGYLLANAFVNVLSEPPRVLTP 444

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
             + YEV     A   C+    P    +I W + S     + +   +  N  +L +  S 
Sbjct: 445 VNKKYEVIRNHRAMLDCSFFGSPIP--NITWFKDSRSSTLDGDSYALHDNG-TLEIRISR 501

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQ 429
             DSG+YTC A+  L   E    L V+ P   L+ P      QVI   ++V     V   
Sbjct: 502 PRDSGKYTCVARNILGIFENHVFLEVKEPTHFLKQPE----YQVIKRGRSVTFECKVKHD 557

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
           S           TW + D E    +  V   ES T  +   V +       +      + 
Sbjct: 558 SSLT-----ATMTWLKDDEELPDDDRFVVGAESLT--ITNVVDSDAGMYTCIMNTTLDHV 610

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ-SVKGTK 548
             S  ++ V     P     LE       +  L W+   + N  +  + I+Y+ S+    
Sbjct: 611 SASAELTVVE---RPDPPTDLELTDQTKRSVVLTWIPGNEYNSHIKNFLIQYEDSLHHRG 667

Query: 549 VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPF 602
               L  +P     T TSA L  L P   Y   +      G    S      K     P 
Sbjct: 668 HWHNLTHVPG----TKTSAHLK-LSPHVHYTFRVLALNDVGWSQPSNPSQMYKTDPAAPD 722

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
           +NP  V+G G+ PNNL+ISW  + +++ N P   Y++ +R    G  W   +V +   S 
Sbjct: 723 ENPTGVQGLGTEPNNLIISWKPLTKLQSNGPGLHYKVMYREKKPGSEWITTNVAN--NSR 780

Query: 663 LVLANQPTFQPYEIKV 678
            V++   TF PYE+KV
Sbjct: 781 FVVSGTSTFAPYELKV 796



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 90/196 (45%), Gaps = 7/196 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE----KDGEGSIREL 455
            VP  AP+    + V ++  A V W  VS  S+RG  +GYKV  W +    +     + ++
Sbjct: 819  VPKSAPTGLRTV-VRNSTMAEVGWKTVSDDSIRGFLKGYKVHYWRDHGVHRHHLDHVEKI 877

Query: 456  IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPL 515
            +   G  +   +    P S     V  FNG   GPPS    F TPEGVPG   SL     
Sbjct: 878  LTFSGNRSHGILPGLHPFSDYSFYVKVFNGRGEGPPSITKHFRTPEGVPGPPTSLVVSNP 937

Query: 516  GSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +  LKW  P  PNG + GY +KYQ V  +      E L   ++   TS  L  L+ S
Sbjct: 938  NLDSLTLKWSPPYDPNGHITGYTLKYQPVNNSNELGEEEVLALAAN--ETSVTLPNLQYS 995

Query: 576  TKYRIHLAGYTKAGDG 591
            T+YR +L   TK G G
Sbjct: 996  TRYRFYLNAKTKIGAG 1011



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 163/403 (40%), Gaps = 52/403 (12%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI------NPSDRISQGNYGKSLIIKHV 94
           K  +    + +E+ C   G P P   W++DG         N + R + G     +  +  
Sbjct: 39  KDHIIDPRENIEIKCEAKGNPDPSFSWTRDGAHFKIEEHPNVNMRPNSGTLEVDITKRRA 98

Query: 95  EFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---PEFINAAEEETVTFECK-AS 150
           E S +G Y C   N  G+A S +I +    +P ++ E   P  +   E  ++   C+  +
Sbjct: 99  E-SFEGVYQCTAENKHGKAVSDNIVVRQSRSPLWSKERLKPRVVQ--EGVSLVLPCEPPA 155

Query: 151 GLPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGN-YGCNA--------- 199
           GLP P I W+ N     + P + R     N  +   N+R+ D+ N Y C A         
Sbjct: 156 GLPPPLIFWMDNN--FQKLPQSTRVSQSLNGDLYFSNVRREDSRNDYICYARFPGTQTIQ 213

Query: 200 ---------------TNSLGYVYKDVYVNVLAHAPEITEA---PKDEYT----VDGKTVV 237
                           +++   Y D  +   A A E   +   PKD ++    + G  + 
Sbjct: 214 QKQPITVKVLNLDSINDTMAAFYNDTDLFSEAPADERMPSFLIPKDRHSSKVVLRGHKLD 273

Query: 238 LTCRVFGAPKPEVNWIHNQKELTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGTA 296
           + C   G P PE++W  +   L  GR + L+    L+I DV+ ++ G Y C A NK G+ 
Sbjct: 274 MECIAEGRPTPEISWTKDGSVLPAGRTSFLQFNKTLQIDDVSDSEEGVYRCTATNKFGSV 333

Query: 297 QGSGSLTVKEHTH-ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE 355
             +  +TVK   + I+  P +  +  G++    C A   P  K  I W +   PI+   E
Sbjct: 334 HHTFHVTVKAAPYWISGPPSNLVLSPGENGMLTCRASGKP--KPLIRWTKNVMPIETGLE 391

Query: 356 PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
              ++  D  +        +S  Y C    E  ++ A A + V
Sbjct: 392 DDTMKVEDDMIIFRDVKTSNSAVYQCNVSNEFGYLLANAFVNV 434


>gi|81158226|ref|NP_001032209.1| neuronal cell adhesion molecule isoform A precursor [Homo sapiens]
 gi|215274127|sp|Q92823.3|NRCAM_HUMAN RecName: Full=Neuronal cell adhesion molecule; Short=Nr-CAM;
           AltName: Full=Neuronal surface protein Bravo;
           Short=hBravo; AltName: Full=NgCAM-related cell adhesion
           molecule; Short=Ng-CAM-related; Flags: Precursor
          Length = 1304

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/394 (35%), Positives = 199/394 (50%), Gaps = 21/394 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  + P +R    N+ K+L I HV  +D G+Y C
Sbjct: 283 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIIHVSEADSGNYQC 340

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+   P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 341 IAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 399

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 400 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 459

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 460 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 519

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 520 TGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTV 579

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  S+ RF    D+ L V   S+ DSG YTC A T LD + A A L+V  P
Sbjct: 580 LWLKDNR--ELPSDERFTVDKDH-LVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAP 636

Query: 402 LEAPS----------NFTLIQVIDAKKAVVSWNP 425
              P+          +  L   +D K   +SW P
Sbjct: 637 TPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWTP 669



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 147/564 (26%), Positives = 234/564 (41%), Gaps = 58/564 (10%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W    K     P N  R V  N    + I ++ ++D+GNY C A
Sbjct: 288 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 342

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK-- 257
            N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 343 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 401

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N+ G    +  + V         P +
Sbjct: 402 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPAN 461

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + + 
Sbjct: 462 TLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKD 518

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVP--LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            +G YTC A+ +L   + +  L ++ P  +     + ++Q    + ++VS+     +   
Sbjct: 519 STGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQ----RGSMVSF-----ECKV 569

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG--- 489
            H     +     KD     REL  +  E  T + D  V A  +      +    N    
Sbjct: 570 KHDHTLSLTVLWLKDN----RELPSD--ERFTVDKDHLVVADVSDDDSGTYTCVANTTLD 623

Query: 490 --PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIK 540
               S ++S V P   P  V  +   P           +  L W   +  N  +  + I+
Sbjct: 624 SVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIE 683

Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKY 596
           Y+        P L         T T+A+L  L P   Y   +      G      A  +Y
Sbjct: 684 YEDAMHK---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNSIGKSLPSEASEQY 739

Query: 597 LFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
           L     P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W    
Sbjct: 740 LTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS-- 797

Query: 655 VLDWRQSELVLANQPTFQPYEIKV 678
           V+    S+ +++  PTF PY IKV
Sbjct: 798 VVVANVSKYIVSGTPTFVPYLIKV 821



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 844  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 902

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 903  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 962

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 963  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIP----ANKTRWTLKNL 1018

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1019 NFSTRYKFYFYAQTSAGSGSQ 1039



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 137/605 (22%), Positives = 225/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 380 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 436 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 493

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 494 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIVKQ 551

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 552 PEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDS 611

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 612 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 666

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 667 WTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 726

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 727 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 785

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 786 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDMGFAPEPAVVMGHSGE 842

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 843 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 902

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 903 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 955

Query: 616 NNLVI 620
           ++L I
Sbjct: 956 SSLKI 960



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 126/315 (40%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 E------HTHITDQPEDYEVEAGQSATFR--------CNAVSDPSLKLSIVWLRG----- 346
                  +  I     D E    +S+  R         NA +   L+ +++ L       
Sbjct: 238 VISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGL 297

Query: 347 SEPIDFESEP-------RFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             PI + ++        R V  N + +L +   SE DSG Y C A+  L  I    ++ V
Sbjct: 298 PTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRV 357

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 358 KAAPYWITAPQNLVL 372



 Score = 39.7 bits (91), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWI 253
           + C   ++L        +  L   P IT+    +Y +D +  +V+ C   G P P  +W 
Sbjct: 22  FLCQMISALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWT 81

Query: 254 HNQKELTGGRYTILE----TGDLKITDVAFADS----GEYTCFARNKLGTAQGSGSLTVK 305
            N       +  ++     TG L I  ++   +    G Y C ARN+ G A  +  +   
Sbjct: 82  RNGTHFDIDKDPLVTMKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRP 141

Query: 306 EHTHI--TDQPEDYEVEAGQSATFRC 329
             + +   ++ E   +++GQS    C
Sbjct: 142 SRSPLWTKEKLEPITLQSGQSLVLPC 167


>gi|397479949|ref|XP_003811262.1| PREDICTED: neuronal cell adhesion molecule [Pan paniscus]
          Length = 1304

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/394 (35%), Positives = 199/394 (50%), Gaps = 21/394 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  + P +R    N+ K+L I HV  +D G+Y C
Sbjct: 283 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIIHVSEADSGNYQC 340

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+   P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 341 IAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 399

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 400 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 459

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 460 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 519

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 520 TGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTV 579

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  S+ RF    D+ L V   S+ DSG YTC A T LD + A A L+V  P
Sbjct: 580 LWLKDNR--ELPSDERFTVDKDH-LVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAP 636

Query: 402 LEAPS----------NFTLIQVIDAKKAVVSWNP 425
              P+          +  L   +D K   +SW P
Sbjct: 637 TPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWTP 669



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 147/564 (26%), Positives = 234/564 (41%), Gaps = 58/564 (10%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W    K     P N  R V  N    + I ++ ++D+GNY C A
Sbjct: 288 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 342

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK-- 257
            N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 343 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 401

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N+ G    +  + V         P +
Sbjct: 402 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPAN 461

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + + 
Sbjct: 462 TLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKD 518

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVP--LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            +G YTC A+ +L   + +  L ++ P  +     + ++Q    + ++VS+     +   
Sbjct: 519 STGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQ----RGSMVSF-----ECKV 569

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG--- 489
            H     +     KD     REL  +  E  T + D  V A  +      +    N    
Sbjct: 570 KHDHTLSLTVLWLKDN----RELPSD--ERFTVDKDHLVVADVSDDDSGTYTCVANTTLD 623

Query: 490 --PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIK 540
               S ++S V P   P  V  +   P           +  L W   +  N  +  + I+
Sbjct: 624 SVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIE 683

Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKY 596
           Y+        P L         T T+A+L  L P   Y   +      G      A  +Y
Sbjct: 684 YEDAMHE---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNSIGKSLPSEASEQY 739

Query: 597 LFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
           L     P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W    
Sbjct: 740 LTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS-- 797

Query: 655 VLDWRQSELVLANQPTFQPYEIKV 678
           V+    S+ +++  PTF PY IKV
Sbjct: 798 VVVANVSKYIVSGTPTFVPYLIKV 821



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 844  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 902

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 903  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 962

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 963  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIP----ANKTRWTLKNL 1018

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1019 NFSTRYKFYFYAQTSAGSGSQ 1039



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 137/605 (22%), Positives = 225/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 380 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 436 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 493

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 494 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIVKQ 551

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 552 PEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDS 611

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 612 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 666

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 667 WTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 726

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 727 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 785

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 786 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDMGFAPEPAVVMGHSGE 842

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 843 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 902

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 903 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 955

Query: 616 NNLVI 620
           ++L I
Sbjct: 956 SSLKI 960



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 126/315 (40%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 E------HTHITDQPEDYEVEAGQSATFR--------CNAVSDPSLKLSIVWLRG----- 346
                  +  I     D E    +S+  R         NA +   L+ +++ L       
Sbjct: 238 VISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGL 297

Query: 347 SEPIDFESEP-------RFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             PI + ++        R V  N + +L +   SE DSG Y C A+  L  I    ++ V
Sbjct: 298 PTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRV 357

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 358 KAAPYWITAPQNLVL 372



 Score = 39.7 bits (91), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWI 253
           + C   ++L        +  L   P IT+    +Y +D +  +V+ C   G P P  +W 
Sbjct: 22  FLCQMISALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWT 81

Query: 254 HNQKELTGGRYTILE----TGDLKITDVAFADS----GEYTCFARNKLGTAQGSGSLTVK 305
            N       +  ++     TG L I  ++   +    G Y C ARN+ G A  +  +   
Sbjct: 82  RNGTHFDIDKDPLVTMKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRP 141

Query: 306 EHTHI--TDQPEDYEVEAGQSATFRC 329
             + +   ++ E   +++GQS    C
Sbjct: 142 SRSPLWTKEKLEPITLQSGQSLVLPC 167


>gi|297681287|ref|XP_002818389.1| PREDICTED: neuronal cell adhesion molecule isoform 1 [Pongo abelii]
          Length = 1211

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 167/523 (31%), Positives = 245/523 (46%), Gaps = 36/523 (6%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  + P +R    N+ K+L I HV  +D G+Y C
Sbjct: 283 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIIHVSEADSGNYQC 340

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+   P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 341 VAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 399

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 400 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNDYGYLLANAFVNVLAEPPRILTP 459

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 460 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 519

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 520 TGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLILTV 579

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  S+ RF    D+ L V   S+ DSG YTC A T LD + A A L+V  P
Sbjct: 580 LWLKDNR--ELPSDERFTVDKDH-LVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAP 636

Query: 402 LEAPS----------NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGS 451
              P+          +  L   +D K   +SW P    +       + ++        G 
Sbjct: 637 TPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWTPGDDNN--SPITKFIIEYEDAMHEPGL 693

Query: 452 IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVT----PEGVPGT 506
                   G  TT ++ K  P      RV+A N      PSE+   ++T    P+  P  
Sbjct: 694 WHHQTEVSGTQTTAQL-KLSPYVNYSFRVMAVNSIGKSLPSEVSEQYLTKASEPDKNPTA 752

Query: 507 VQSLEAIPLGSSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
           V+ L + P       + W KP    + NG  + YK+ ++   G
Sbjct: 753 VEGLGSEP---DNLVITW-KPLNGFESNGPGLQYKVSWRQKDG 791



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 147/564 (26%), Positives = 233/564 (41%), Gaps = 58/564 (10%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W    K     P N  R V  N    + I ++ ++D+GNY C A
Sbjct: 288 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCVA 342

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QK 257
            N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 343 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 401

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N  G    +  + V         P +
Sbjct: 402 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNDYGYLLANAFVNVLAEPPRILTPAN 461

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + + 
Sbjct: 462 TLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKD 518

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVP--LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            +G YTC A+ +L   + +  L ++ P  +     + ++Q    + ++VS+     +   
Sbjct: 519 STGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQ----RGSMVSF-----ECKV 569

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG--- 489
            H     +     KD     REL  +  E  T + D  V A  +      +    N    
Sbjct: 570 KHDHTLILTVLWLKDN----RELPSD--ERFTVDKDHLVVADVSDDDSGTYTCVANTTLD 623

Query: 490 --PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIK 540
               S ++S V P   P  V  +   P           +  L W   +  N  +  + I+
Sbjct: 624 SVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIE 683

Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES----KY 596
           Y+        P L         T T+A+L  L P   Y   +      G    S    +Y
Sbjct: 684 YEDAMHE---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNSIGKSLPSEVSEQY 739

Query: 597 LFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
           L     P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W    
Sbjct: 740 LTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS-- 797

Query: 655 VLDWRQSELVLANQPTFQPYEIKV 678
           V+    S+ +++  PTF PY IKV
Sbjct: 798 VVVANVSKYIVSGTPTFVPYLIKV 821



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 844  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 902

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 903  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 962

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 963  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 1018

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1019 NFSTRYKFYFYAQTSAGSGSQ 1039



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 137/605 (22%), Positives = 224/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 380 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 436 NDYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 493

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 494 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIVKQ 551

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 552 PEYAVVQRGSMVSFECKVKHDHTLILTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDS 611

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 612 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 666

Query: 343 WLRGSE---PI--------DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           W  G +   PI        D   EP              +++L    Y   +   +    
Sbjct: 667 WTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 726

Query: 392 AQATLTVQV-------PLEAPSNFTLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
              +L  +V         E   N T ++ + ++    V++W P++     G    YKV +
Sbjct: 727 IGKSLPSEVSEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 785

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 786 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAVVMGHSGE 842

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 843 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 902

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 903 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 955

Query: 616 NNLVI 620
           ++L I
Sbjct: 956 SSLKI 960



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 126/315 (40%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 E------HTHITDQPEDYEVEAGQSATFR--------CNAVSDPSLKLSIVWLRG----- 346
                  +  I     D E    +S+  R         NA +   L+ +++ L       
Sbjct: 238 VISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGL 297

Query: 347 SEPIDFESEP-------RFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             PI + ++        R V  N + +L +   SE DSG Y C A+  L  I    ++ V
Sbjct: 298 PTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCVAKNALGAIHHTISVRV 357

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 358 KAAPYWITAPQNLVL 372



 Score = 39.7 bits (91), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWI 253
           + C   ++L        +  L   P IT+    +Y +D +  +V+ C   G P P  +W 
Sbjct: 22  FLCQMISALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWT 81

Query: 254 HNQKELTGGRYTILE----TGDLKITDVAFADS----GEYTCFARNKLGTAQGSGSLTVK 305
            N       +  ++     TG L I  ++   +    G Y C ARN+ G A  +  +   
Sbjct: 82  RNGTHFDIDKDPLVTMKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRP 141

Query: 306 EHTHI--TDQPEDYEVEAGQSATFRC 329
             + +   ++ E   +++GQS    C
Sbjct: 142 SRSPLWTKEKLEPITLQSGQSLVLPC 167


>gi|2511666|emb|CAA04507.1| NrCAM protein [Homo sapiens]
          Length = 1299

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/394 (35%), Positives = 199/394 (50%), Gaps = 21/394 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  + P +R    N+ K+L I HV  +D G+Y C
Sbjct: 278 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIIHVSEADSGNYQC 335

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+   P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 336 IAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 394

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 395 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 454

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 455 ANTLYQVIANRPALLDCAFFGSPLPTIQWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 514

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 515 TGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTV 574

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  S+ RF    D+ L V   S+ DSG YTC A T LD + A A L+V  P
Sbjct: 575 LWLKDNR--ELPSDERFTVDKDH-LVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAP 631

Query: 402 LEAPS----------NFTLIQVIDAKKAVVSWNP 425
              P+          +  L   +D K   +SW P
Sbjct: 632 TPTPAPVYDVPNPPLDLELTDQLD-KSVQLSWTP 664



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 147/564 (26%), Positives = 232/564 (41%), Gaps = 58/564 (10%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W    K     P N  R V  N    + I ++ ++D+GNY C A
Sbjct: 283 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 337

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK-- 257
            N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 338 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 396

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N+ G    +  + V         P +
Sbjct: 397 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPAN 456

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + + 
Sbjct: 457 TLYQVIANRPALLDCAFFGSP--LPTIQWFKGAKGSALH-EDIYVLHENGTLEIPVAQKD 513

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVP--LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            +G YTC A+ +L   + +  L ++ P  +     + ++Q    + ++VS+     +   
Sbjct: 514 STGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQ----RGSMVSF-----ECKV 564

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG--- 489
            H     +     KD     REL  +  E  T + D  V A  +      +    N    
Sbjct: 565 KHDHTLSLTVLWLKDN----RELPSD--ERFTVDKDHLVVADVSDDDSGTYTCVANTTLD 618

Query: 490 --PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIK 540
               S ++S V P   P  V  +   PL          +  L W   +  N  +     +
Sbjct: 619 SVSASAVLSVVAPTPTPAPVYDVPNPPLDLELTDQLDKSVQLSWTPGDDNNSPITTIHDE 678

Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKY 596
           Y+        P L         T T+A+L  L P   Y   +      G      A  +Y
Sbjct: 679 YEDAMHK---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNSIGKSLPSEASEQY 734

Query: 597 LFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
           L     P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+    + W    
Sbjct: 735 LTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFEFNGPGLQYKVSWRQKVGDDEWTS-- 792

Query: 655 VLDWRQSELVLANQPTFQPYEIKV 678
           V+    S+ +++  PTF PY IKV
Sbjct: 793 VVVANVSKYIVSGTPTFVPYLIKV 816



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 839  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 897

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 898  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSVPSSLKIVN 957

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 958  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINNTHELGPLVDLKIP----ANKTRWTLKNL 1013

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              +T+Y+ +    T AG G++
Sbjct: 1014 NFTTRYKFYFYAQTSAGSGSQ 1034



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 144/618 (23%), Positives = 236/618 (38%), Gaps = 87/618 (14%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 375 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 430

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 431 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIQWFKGAK- 488

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 489 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIVKQ 546

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 547 PEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDS 606

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHT-------HITDQPEDYEVEAGQSATFRCNAVSDP 335
           G YTC A   L +   S  L+V   T        + + P D E+              D 
Sbjct: 607 GTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPLDLELTDQL----------DK 656

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTK------SSELDSGQYTCRAQTELD- 388
           S++LS  W  G    D  + P     ++Y   + K       +E+   Q T  AQ +L  
Sbjct: 657 SVQLS--WTPG----DDNNSPITTIHDEYEDAMHKPGLWHHQTEVSGTQTT--AQLKLSP 708

Query: 389 ------FIEAQATLTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQ 429
                  + A  ++   +P EA   +           T ++ + ++    V++W P++  
Sbjct: 709 YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGF 768

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
              G    YKV +W +K G+     ++V N  +   +    FVP      +V A N    
Sbjct: 769 EFNGPGLQYKV-SWRQKVGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDMGF 824

Query: 489 GPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
            P   ++   + E +P     ++    + S+   + W  V  +   G L GY+I Y   +
Sbjct: 825 APEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQ 884

Query: 546 GT--KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPF 602
            +  +    +E+       + T   L GLEP + Y +++      G+G A    +F  P 
Sbjct: 885 SSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP- 943

Query: 603 KNPDNVEGRGSTPNNLVI 620
                 EG  S P++L I
Sbjct: 944 ------EGVPSVPSSLKI 955



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 126/315 (40%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 57  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 112

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 113 EGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 172

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 173 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 232

Query: 306 E------HTHITDQPEDYEVEAGQSATFR--------CNAVSDPSLKLSIVWLRG----- 346
                  +  I     D E    +S+  R         NA +   L+ +++ L       
Sbjct: 233 VISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGL 292

Query: 347 SEPIDFESEP-------RFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             PI + ++        R V  N + +L +   SE DSG Y C A+  L  I    ++ V
Sbjct: 293 PTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRV 352

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 353 KAAPYWITAPQNLVL 367



 Score = 39.7 bits (91), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWI 253
           + C   ++L        +  L   P IT+    +Y +D +  +V+ C   G P P  +W 
Sbjct: 17  FLCQMISALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWT 76

Query: 254 HNQKELTGGRYTILE----TGDLKITDVAFADS----GEYTCFARNKLGTAQGSGSLTVK 305
            N       +  ++     TG L I  ++   +    G Y C ARN+ G A  +  +   
Sbjct: 77  RNGTHFDIDKDPLVTMKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRP 136

Query: 306 EHTHI--TDQPEDYEVEAGQSATFRC 329
             + +   ++ E   +++GQS    C
Sbjct: 137 SRSPLWTKEKLEPITLQSGQSLVLPC 162


>gi|1842429|gb|AAB47754.1| ankyrin binding cell adhesion molecule neurofascin [Rattus
           norvegicus]
          Length = 1217

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/373 (35%), Positives = 192/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 228 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 286

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 287 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 345

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 346 WLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 405

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + + G L+I
Sbjct: 406 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYQNGSLEI 464

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 465 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 524

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 525 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKA 581

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 582 YLTVLADQATPTN 594



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 159/668 (23%), Positives = 264/668 (39%), Gaps = 80/668 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 143 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 201

Query: 113 AKSYSIDLSVLAA-------PYFTVEPEFINAAEE----ETVTFECKASGLPEPEIHWVH 161
              ++  L VL         P F + P+  ++++       +  EC ASG+P P+I W  
Sbjct: 202 KNPFT--LKVLTTRGVAERTPSF-MYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYK 258

Query: 162 NGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
            G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP 
Sbjct: 259 KGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APY 314

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKIT 275
             + PK+     G+   L CR  G PKP V W+ N   L        R    +T  +   
Sbjct: 315 WLDEPKNLILAPGEDGRLVCRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDT--IIFR 372

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           D   +    Y C   N+ G    +  ++V +       P +  +        R +     
Sbjct: 373 DTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFG 432

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
           S   ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  
Sbjct: 433 SPIPTLRWFKNGQGSNLDGGNYHVYQNG-SLEIKMIRKEDQGIYTCVATNILGKAENQVR 491

Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIRE 454
           L V+ P       T I  +   +       V  +    H    K+  +W + D    I  
Sbjct: 492 LEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 544

Query: 455 LIVNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
            +  + +S T                 TE+D+ +  +K +  VLA       P + + + 
Sbjct: 545 RMKKEDDSLTIFGVAERDQGSYTCMASTELDQDL--AKAYLTVLADQAT---PTNRLAAL 599

Query: 498 VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLP 557
             P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G L +   
Sbjct: 600 --PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVLHDHSK 656

Query: 558 YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGR 611
           +   P + ++ +  L P   Y   +    + G    S      +     P  NP +V+G 
Sbjct: 657 F---PGSVNSAVLHLSPYVNYDFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGE 713

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIF-WRRHNTGEAWNQDDVLDWRQSELVLANQPT 670
           G+  NN+ I+WT M       P+ +Y I  WRR  T E WN  +V  W  S  V+   P 
Sbjct: 714 GTRKNNMEITWTPMNATSAFGPNLRYYIVKWRRRETRETWN--NVTVW-GSRYVVGQTPV 770

Query: 671 FQPYEIKV 678
           + PYEI+V
Sbjct: 771 YVPYEIRV 778



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 8/172 (4%)

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           ++W P++  S  G    Y +  W  ++   +   + V        +   +VP      RV
Sbjct: 722 ITWTPMNATSAFGPNLRYYIVKWRRRETRETWNNVTVWGSRYVVGQTPVYVPYE---IRV 778

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
            A N    GP  E +   + E +P   +             L+W  PE PNG+L+GY ++
Sbjct: 779 QAENDFGKGPEPETVIGYSGEDLPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLR 838

Query: 541 YQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           Y    GTK+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 839 YVPFNGTKLGKQMVENF----SPNQTKFSVQRADPVSRYRFSLSARTQVGSG 886



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 120/296 (40%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 33  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 92

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 93  QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 152

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T 
Sbjct: 153 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 212

Query: 310 --ITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             + ++   +    G S++            C A   P+    I W +     D  S+  
Sbjct: 213 RGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 268

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 269 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 324



 Score = 47.0 bits (110), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++  
Sbjct: 11  NELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 70

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
                + D           GEY CFARNK GTA     L+ +    ++  P    E+ + 
Sbjct: 71  RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 125

Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 126 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 181

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
           D    Y+C A+      I+ +   T++V
Sbjct: 182 DMQTDYSCNARFHFTHTIQQKNPFTLKV 209


>gi|297289132|ref|XP_001096098.2| PREDICTED: neuronal cell adhesion molecule isoform 1 [Macaca
           mulatta]
          Length = 1183

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/384 (35%), Positives = 197/384 (51%), Gaps = 11/384 (2%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  + P +R    N+ K+L I HV  +D G+Y C
Sbjct: 277 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIIHVSEADSGNYQC 334

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+   P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 335 IAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 393

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 394 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 453

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 454 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 513

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 514 TGTYTCVARNKLGMAKNEVHLEIKDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTV 573

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  S+ RF    D+ L +   S+ DSG YTC A T LD + A A L+V   
Sbjct: 574 LWLKDNR--ELPSDERFTVDKDH-LVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVDV 630

Query: 402 LEAPSNFTLIQVIDAKKAVVSWNP 425
              P +  L   +D K   +SW P
Sbjct: 631 PNPPFDLELTDQLD-KSVQLSWTP 653



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 147/558 (26%), Positives = 237/558 (42%), Gaps = 56/558 (10%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W    K     P N  R V  N    + I ++ ++D+GNY C A
Sbjct: 282 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 336

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QK 257
            N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 337 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 395

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N+ G    +  + V         P +
Sbjct: 396 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPAN 455

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + + 
Sbjct: 456 TLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKD 512

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
            +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q    + ++VS+       +
Sbjct: 513 STGTYTCVARNKLGMAKNEVHLEIKDPTWIIKQPE-YAVVQ----RGSMVSFE----CKV 563

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG-- 489
           +  +       W + +     REL  +  E  T + D  V A  +      +    N   
Sbjct: 564 KHDYTLTLTVLWLKDN-----RELPSD--ERFTVDKDHLVIADVSDNDSGTYTCVANTTL 616

Query: 490 ---PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKG 546
                S ++S V    VP     LE       +  L W   +  N  +  + I+Y+    
Sbjct: 617 DSVSASAVLSVV---DVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYED--- 670

Query: 547 TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV-- 600
           T   P L         T T+A+L  L P   Y   +      G      A  +YL     
Sbjct: 671 TMHEPGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE 729

Query: 601 PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ 660
           P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W    V+    
Sbjct: 730 PDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS--VVVANV 787

Query: 661 SELVLANQPTFQPYEIKV 678
           S+ +++  PTF PY IKV
Sbjct: 788 SKYIVSGTPTFVPYLIKV 805



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 828  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 886

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 887  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 946

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 947  PTLDSLTLEWHPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIP----ANKTRWTLKNL 1002

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1003 NFSTRYKFYFYAQTSAGSGSQ 1023



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 142/605 (23%), Positives = 231/605 (38%), Gaps = 71/605 (11%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 374 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 429

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 430 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 487

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 488 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIIKQ 545

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L I DV+  DS
Sbjct: 546 PEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKDNRELPSDERFTVDKDHLVIADVSDNDS 605

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V +   + + P D E+              D S++LS  
Sbjct: 606 GTYTCVANTTLDSVSASAVLSVVD---VPNPPFDLELTDQL----------DKSVQLS-- 650

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 651 WTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 710

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 711 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 769

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 770 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAVVMGHSGE 826

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 827 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 886

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 887 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 939

Query: 616 NNLVI 620
           ++L I
Sbjct: 940 SSLKI 944



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 134/344 (38%), Gaps = 57/344 (16%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNG-------K 164
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  ISALEVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKD 86

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDT--GNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           P+    P      G   I I +  K++T  G Y C A N  G    +  V   + +P  T
Sbjct: 87  PLVTMKPG----TGTLIINIMSEGKAETYEGVYQCTARNERGAAISNNIVVRPSRSPLWT 142

Query: 223 EAPKDEYTVD-GKTVVLTCRVFGAPKPEVN-WIHN--QKELTGGRYTILETGDLKITDVA 278
           +   +  T+  G+++VL CR      P +  W+ N  Q+     R +    GDL  ++V 
Sbjct: 143 KEKLEPITLQSGQSLVLPCRPPIGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVL 202

Query: 279 FADSGE-YTCFAR-NKLGTAQGSGSLTVKE------HTHITDQPEDYEVEAGQSATFR-- 328
             D+ E Y C+AR N   T Q    ++VK       +  I     D E    +S+  R  
Sbjct: 203 PEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFYGAKSSRERPP 262

Query: 329 ------CNAVSDPSLKLSIVWLRG-----SEPIDFESEP-------RFVQSN-DYSLTVT 369
                  NA +   L+ +++ L         PI + ++        R V  N + +L + 
Sbjct: 263 TFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQII 322

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             SE DSG Y C A+  L  I    ++ V+     + AP N  L
Sbjct: 323 HVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLVL 366


>gi|402864555|ref|XP_003896525.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Papio anubis]
          Length = 1183

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/384 (35%), Positives = 197/384 (51%), Gaps = 11/384 (2%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  + P +R    N+ K+L I HV  +D G+Y C
Sbjct: 277 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIIHVSEADSGNYQC 334

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+   P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 335 IAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 393

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 394 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 453

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 454 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 513

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 514 TGTYTCVARNKLGMAKNEVHLEIKDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTV 573

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  S+ RF    D+ L +   S+ DSG YTC A T LD + A A L+V   
Sbjct: 574 LWLKDNR--ELPSDERFTVDKDH-LVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVDV 630

Query: 402 LEAPSNFTLIQVIDAKKAVVSWNP 425
              P +  L   +D K   +SW P
Sbjct: 631 PNPPFDLELTDQLD-KSVQLSWTP 653



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 147/558 (26%), Positives = 237/558 (42%), Gaps = 56/558 (10%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W    K     P N  R V  N    + I ++ ++D+GNY C A
Sbjct: 282 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 336

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QK 257
            N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 337 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 395

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N+ G    +  + V         P +
Sbjct: 396 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPAN 455

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + + 
Sbjct: 456 TLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKD 512

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
            +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q    + ++VS+       +
Sbjct: 513 STGTYTCVARNKLGMAKNEVHLEIKDPTWIIKQPE-YAVVQ----RGSMVSFE----CKV 563

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG-- 489
           +  +       W + +     REL  +  E  T + D  V A  +      +    N   
Sbjct: 564 KHDYTLTLTVLWLKDN-----RELPSD--ERFTVDKDHLVIADVSDNDSGTYTCVANTTL 616

Query: 490 ---PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKG 546
                S ++S V    VP     LE       +  L W   +  N  +  + I+Y+    
Sbjct: 617 DSVSASAVLSVV---DVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYED--- 670

Query: 547 TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV-- 600
           T   P L         T T+A+L  L P   Y   +      G      A  +YL     
Sbjct: 671 TMHEPGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE 729

Query: 601 PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ 660
           P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W    V+    
Sbjct: 730 PDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS--VVVANV 787

Query: 661 SELVLANQPTFQPYEIKV 678
           S+ +++  PTF PY IKV
Sbjct: 788 SKYIVSGTPTFVPYLIKV 805



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 828  LPMVAPGNVR-VNVVNSTLAEVRWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 886

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 887  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 946

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 947  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIP----ANKTRWTLKNL 1002

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1003 NFSTRYKFYFYAQTSAGSGSQ 1023



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 142/605 (23%), Positives = 232/605 (38%), Gaps = 71/605 (11%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 374 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 429

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 430 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 487

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 488 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIIKQ 545

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L I DV+  DS
Sbjct: 546 PEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKDNRELPSDERFTVDKDHLVIADVSDNDS 605

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V +   + + P D E+              D S++LS  
Sbjct: 606 GTYTCVANTTLDSVSASAVLSVVD---VPNPPFDLELTDQL----------DKSVQLS-- 650

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 651 WTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 710

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 711 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 769

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 770 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAVVMGHSGE 826

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   ++W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 827 DLPMVAPGNVRVNVVNSTLAEVRWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 886

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 887 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 939

Query: 616 NNLVI 620
           ++L I
Sbjct: 940 SSLKI 944



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 134/344 (38%), Gaps = 57/344 (16%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNG-------K 164
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  ISALEVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKD 86

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDT--GNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           P+    P      G   I I +  K++T  G Y C A N  G    +  V   + +P  T
Sbjct: 87  PLVTMKPG----TGTLIINIMSEGKAETYEGVYQCTARNERGAAISNNIVVRPSRSPLWT 142

Query: 223 EAPKDEYTVD-GKTVVLTCRVFGAPKPEVN-WIHN--QKELTGGRYTILETGDLKITDVA 278
           +   +  T+  G+++VL CR      P +  W+ N  Q+     R +    GDL  ++V 
Sbjct: 143 KEKLEPITLQSGQSLVLPCRPPIGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVL 202

Query: 279 FADSGE-YTCFAR-NKLGTAQGSGSLTVKE------HTHITDQPEDYEVEAGQSATFR-- 328
             D+ E Y C+AR N   T Q    ++VK       +  I     D E    +S+  R  
Sbjct: 203 PEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFYGAKSSRERPP 262

Query: 329 ------CNAVSDPSLKLSIVWLRG-----SEPIDFESEP-------RFVQSN-DYSLTVT 369
                  NA +   L+ +++ L         PI + ++        R V  N + +L + 
Sbjct: 263 TFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQII 322

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             SE DSG Y C A+  L  I    ++ V+     + AP N  L
Sbjct: 323 HVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLVL 366


>gi|213626374|gb|AAI71560.1| Si:dkey-240a12.1 protein [Danio rerio]
          Length = 1291

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 196/727 (26%), Positives = 316/727 (43%), Gaps = 76/727 (10%)

Query: 31  HAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLI 90
           H P  +  T    + L+   +EL CI  G P P   W+K    + PS R S  ++ K+L 
Sbjct: 245 HPPGMESTT----MVLKGDTLELECIADGLPTPNISWTKVNGEL-PSGRFSFYSFQKTLK 299

Query: 91  IKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKAS 150
           IK V  +D G Y+C   N +G ++ ++I + V AAP++   P+ +  A +ET    C   
Sbjct: 300 IKEVTEADGGDYSCLAKNRMGSSQ-HTITVVVRAAPFWISAPQNLILAPKETGNLTCDVD 358

Query: 151 GLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDV 210
           G P+P I W  NG PI  +  +P RKV    IT+ +++   +  Y CNA+N  GY+  + 
Sbjct: 359 GNPKPTITWSVNGNPIESSHNDPSRKVSDGVITLSDVQTGSSAVYQCNASNDYGYLLANA 418

Query: 211 YVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHN-QKELTGGRYTILE 268
           +V+VLA  P +  +   EY+V      +L C  FG+P P++ W  + Q  L    Y I +
Sbjct: 419 FVSVLAEPPRVLTSLNHEYSVISNSRALLDCASFGSPLPKITWFKDSQNILNSDLYHIHK 478

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
            G L+I      +SG+YTC A N LG  +    L VKE T I  QPE  EV+    A F 
Sbjct: 479 NGTLEINVAQPQNSGKYTCIASNNLGNKENHVHLQVKEPTRIIRQPEYKEVQRNSIAVFE 538

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C    DP+L  S++WL+ +   +   +PRF   +D SLT+   +E D G YTC   T LD
Sbjct: 539 CKVKHDPTLIPSMIWLKDNG--ELPDDPRFEVGSD-SLTIHDVTEDDEGTYTCIRNTTLD 595

Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV--SWNPVSPQSLRGHFRGYKVQTWTEK 446
              A ATLTV   +E P   T +++ D ++  V  +W P    +     + + +Q     
Sbjct: 596 QDSASATLTV---VEQPDPPTDLELTDQRERSVRLTWTPGDEHN--SPIKLFLIQYEDSL 650

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNG---AYNGPPSEI--ISFVTPE 501
              G    +    G STT +++   P      RVLA NG   + +  PS     +   P+
Sbjct: 651 HEPGVWLNMTEVSGTSTTAQLE-LSPYVYYSFRVLALNGVGLSESSDPSRQYRTNPAKPD 709

Query: 502 GVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
             P  V+     P       + W  +   + NG  + YK+ ++           E+   +
Sbjct: 710 VNPSDVEVSGTSP---DTMTISWRELSGLESNGPGLQYKVSWRMKDA-------EQWTTV 759

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKN-----PDNVEGRGST 614
           +    +   + G    T Y + +      G+G   + +     +N     P+NV+    +
Sbjct: 760 TLANVSQHVVTGTPTFTLYEVTVQAVNDYGEGPRPEVVLGYSGENSPTVAPENVKVSVQS 819

Query: 615 PNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPY 674
                + W A+P          Y++ +++                               
Sbjct: 820 ETEAEVHWEAVPLSSVRGRLKGYKVTYQK------------------------------- 848

Query: 675 EIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 734
               +++  ++D +    ++++  GE T   +    P S     + AFNG  +GP S   
Sbjct: 849 ----MRSLHKQDYDRENPQVLIFSGEETVGRLPDLHPYSHYRLNIRAFNGHGDGPSSTDQ 904

Query: 735 SFVTPEG 741
            F TPEG
Sbjct: 905 QFQTPEG 911



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 162/374 (43%), Gaps = 30/374 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG----VPINPSDRISQGNYGKSLIIKHVEFSD--QGSY 102
           + + +FC   G P P   W+++G    V  +P   +  G  G  +I    E ++  +G Y
Sbjct: 55  ENINIFCEAKGKPHPSFSWTRNGTHFDVEKDPKVVMMPGT-GNLVIDISGEKAEVYEGVY 113

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWV 160
            C   N  G A S +I +    +P ++ E  E I      ++  +C+  +GLP P I W+
Sbjct: 114 QCIARNEHGSAVSNNIVIRQSRSPLWSKEKNEPITVQRGTSLILQCRPPAGLPPPIIFWM 173

Query: 161 HNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGN-YGCNA----TNSLGYVYKDVYVNV 214
            N     + P N R     N  +   N+   DT N Y C A    T ++    + + V V
Sbjct: 174 DNN--FQRLPQNSRVSQALNGDLYFSNVIMEDTRNDYICYARFPHTQTIQQ-KQPITVKV 230

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L ++P     P              + G T+ L C   G P P ++W     EL  GR++
Sbjct: 231 LDNSPSGERVPSFLHPPGMESTTMVLKGDTLELECIADGLPTPNISWTKVNGELPSGRFS 290

Query: 266 ILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
                  LKI +V  AD G+Y+C A+N++G++Q + ++ V+        P++  +   ++
Sbjct: 291 FYSFQKTLKIKEVTEADGGDYSCLAKNRMGSSQHTITVVVRAAPFWISAPQNLILAPKET 350

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
               C+   +P  K +I W     PI+        + +D  +T++      S  Y C A 
Sbjct: 351 GNLTCDVDGNP--KPTITWSVNGNPIESSHNDPSRKVSDGVITLSDVQTGSSAVYQCNAS 408

Query: 385 TELDFIEAQATLTV 398
            +  ++ A A ++V
Sbjct: 409 NDYGYLLANAFVSV 422



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 94/197 (47%), Gaps = 10/197 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV-----QTWTEKDGEGSIREL 455
           P  AP N   + V    +A V W  V   S+RG  +GYKV     ++  ++D +    ++
Sbjct: 806 PTVAPENVK-VSVQSETEAEVHWEAVPLSSVRGRLKGYKVTYQKMRSLHKQDYDRENPQV 864

Query: 456 IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPL 515
           ++  GE T   +    P S     + AFNG  +GP S    F TPEGVPG   ++    L
Sbjct: 865 LIFSGEETVGRLPDLHPYSHYRLNIRAFNGHGDGPSSTDQQFQTPEGVPGPPTNVNIRNL 924

Query: 516 GSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLEP 574
              +  ++W  P + NG L GY +KYQ +  T +VG L E L   ++   TS  L  L  
Sbjct: 925 NLDSLLVEWTPPLEDNGHLTGYLLKYQPINTTEEVGLLKEVLLPANE---TSYTLDKLTH 981

Query: 575 STKYRIHLAGYTKAGDG 591
           ST Y+  L   T+ G G
Sbjct: 982 STHYKFFLNAMTETGSG 998



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 117/298 (39%), Gaps = 35/298 (11%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIE-NLRKSDT--GNYG 196
           E +   C+A G P P   W  NG     +  P      G   + I+ +  K++   G Y 
Sbjct: 55  ENINIFCEAKGKPHPSFSWTRNGTHFDVEKDPKVVMMPGTGNLVIDISGEKAEVYEGVYQ 114

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCR-VFGAPKPEVNWIH 254
           C A N  G    +  V   + +P  ++   +  TV  G +++L CR   G P P + W+ 
Sbjct: 115 CIARNEHGSAVSNNIVIRQSRSPLWSKEKNEPITVQRGTSLILQCRPPAGLPPPIIFWMD 174

Query: 255 N--QKELTGGRYTILETGDLKITDVAFADS-GEYTCFAR-NKLGTAQGSGSLTVK----- 305
           N  Q+     R +    GDL  ++V   D+  +Y C+AR     T Q    +TVK     
Sbjct: 175 NNFQRLPQNSRVSQALNGDLYFSNVIMEDTRNDYICYARFPHTQTIQQKQPITVKVLDNS 234

Query: 306 -------EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF 358
                     H         V  G +    C A   P+  +S   + G  P       RF
Sbjct: 235 PSGERVPSFLHPPGMESTTMVLKGDTLELECIADGLPTPNISWTKVNGELP-----SGRF 289

Query: 359 -VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP-----LEAPSNFTL 410
              S   +L + + +E D G Y+C A+  +    +Q T+TV V      + AP N  L
Sbjct: 290 SFYSFQKTLKIKEVTEADGGDYSCLAKNRMG--SSQHTITVVVRAAPFWISAPQNLIL 345


>gi|6651380|gb|AAF22282.1|AF172277_1 NgCAM-related related cell adhesion molecule [Homo sapiens]
          Length = 1308

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/394 (35%), Positives = 199/394 (50%), Gaps = 21/394 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  + P +R    N+ K+L I HV  +D G+Y C
Sbjct: 283 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIIHVSEADSGNYQC 340

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+   P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 341 IAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 399

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 400 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 459

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 460 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 519

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 520 TGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTV 579

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  S+ RF    D+ L V   S+ DSG YTC A T LD + A A L+V  P
Sbjct: 580 LWLKDNR--ELPSDERFTVDKDH-LVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAP 636

Query: 402 LEAPS----------NFTLIQVIDAKKAVVSWNP 425
              P+          +  L   +D K   +SW P
Sbjct: 637 TPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWTP 669



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 147/564 (26%), Positives = 234/564 (41%), Gaps = 58/564 (10%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W    K     P N  R V  N    + I ++ ++D+GNY C A
Sbjct: 288 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 342

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK-- 257
            N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 343 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 401

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N+ G    +  + V         P +
Sbjct: 402 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPAN 461

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + + 
Sbjct: 462 TLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKD 518

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVP--LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            +G YTC A+ +L   + +  L ++ P  +     + ++Q    + ++VS+     +   
Sbjct: 519 STGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQ----RGSMVSF-----ECKV 569

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG--- 489
            H     +     KD     REL  +  E  T + D  V A  +      +    N    
Sbjct: 570 KHDHTLSLTVLWLKDN----RELPSD--ERFTVDKDHLVVADVSDDDSGTYTCVANTTLD 623

Query: 490 --PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIK 540
               S ++S V P   P  V  +   P           +  L W   +  N  +  + I+
Sbjct: 624 SVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIE 683

Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKY 596
           Y+        P L         T T+A+L  L P   Y   +      G      A  +Y
Sbjct: 684 YEDAMHK---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNSIGKSLPSEASEQY 739

Query: 597 LFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
           L     P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W    
Sbjct: 740 LTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS-- 797

Query: 655 VLDWRQSELVLANQPTFQPYEIKV 678
           V+    S+ +++  PTF PY IKV
Sbjct: 798 VVVANVSKYIVSGTPTFVPYLIKV 821



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 844  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 902

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 903  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 962

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 963  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIP----ANKTRWTLKNL 1018

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1019 NFSTRYKFYFYAQTSAGSGSQ 1039



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 137/605 (22%), Positives = 225/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 380 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 436 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 493

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 494 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIVKQ 551

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 552 PEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDS 611

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 612 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 666

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 667 WTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 726

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 727 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 785

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 786 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDMGFAPEPAVVMGHSGE 842

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 843 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 902

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 903 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 955

Query: 616 NNLVI 620
           ++L I
Sbjct: 956 SSLKI 960



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 126/315 (40%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 E------HTHITDQPEDYEVEAGQSATFR--------CNAVSDPSLKLSIVWLRG----- 346
                  +  I     D E    +S+  R         NA +   L+ +++ L       
Sbjct: 238 VISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGL 297

Query: 347 SEPIDFESEP-------RFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             PI + ++        R V  N + +L +   SE DSG Y C A+  L  I    ++ V
Sbjct: 298 PTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRV 357

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 358 KAAPYWITAPQNLVL 372



 Score = 39.7 bits (91), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWI 253
           + C   ++L        +  L   P IT+    +Y +D +  +V+ C   G P P  +W 
Sbjct: 22  FLCQMISALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWT 81

Query: 254 HNQKELTGGRYTILE----TGDLKITDVAFADS----GEYTCFARNKLGTAQGSGSLTVK 305
            N       +  ++     TG L I  ++   +    G Y C ARN+ G A  +  +   
Sbjct: 82  RNGTHFDIDKDPLVTMKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRP 141

Query: 306 EHTHI--TDQPEDYEVEAGQSATFRC 329
             + +   ++ E   +++GQS    C
Sbjct: 142 SRSPLWTKEKLEPITLQSGQSLVLPC 167


>gi|302191647|ref|NP_001180511.1| neuronal cell adhesion molecule isoform D precursor [Homo sapiens]
          Length = 1211

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/394 (35%), Positives = 199/394 (50%), Gaps = 21/394 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  + P +R    N+ K+L I HV  +D G+Y C
Sbjct: 283 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIIHVSEADSGNYQC 340

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+   P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 341 IAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 399

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 400 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 459

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 460 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 519

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 520 TGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTV 579

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  S+ RF    D+ L V   S+ DSG YTC A T LD + A A L+V  P
Sbjct: 580 LWLKDNR--ELPSDERFTVDKDH-LVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAP 636

Query: 402 LEAPS----------NFTLIQVIDAKKAVVSWNP 425
              P+          +  L   +D K   +SW P
Sbjct: 637 TPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWTP 669



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 147/564 (26%), Positives = 234/564 (41%), Gaps = 58/564 (10%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W    K     P N  R V  N    + I ++ ++D+GNY C A
Sbjct: 288 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 342

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QK 257
            N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 343 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 401

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N+ G    +  + V         P +
Sbjct: 402 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPAN 461

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + + 
Sbjct: 462 TLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKD 518

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVP--LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            +G YTC A+ +L   + +  L ++ P  +     + ++Q    + ++VS+     +   
Sbjct: 519 STGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQ----RGSMVSF-----ECKV 569

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG--- 489
            H     +     KD     REL  +  E  T + D  V A  +      +    N    
Sbjct: 570 KHDHTLSLTVLWLKDN----RELPSD--ERFTVDKDHLVVADVSDDDSGTYTCVANTTLD 623

Query: 490 --PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIK 540
               S ++S V P   P  V  +   P           +  L W   +  N  +  + I+
Sbjct: 624 SVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIE 683

Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKY 596
           Y+        P L         T T+A+L  L P   Y   +      G      A  +Y
Sbjct: 684 YEDAMHK---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNSIGKSLPSEASEQY 739

Query: 597 LFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
           L     P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W    
Sbjct: 740 LTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS-- 797

Query: 655 VLDWRQSELVLANQPTFQPYEIKV 678
           V+    S+ +++  PTF PY IKV
Sbjct: 798 VVVANVSKYIVSGTPTFVPYLIKV 821



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 844  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 902

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 903  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 962

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 963  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 1018

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1019 NFSTRYKFYFYAQTSAGSGSQ 1039



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 137/605 (22%), Positives = 225/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 380 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 436 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 493

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 494 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIVKQ 551

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L + DV+  DS
Sbjct: 552 PEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDS 611

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 612 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 666

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 667 WTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 726

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 727 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 785

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 786 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDMGFAPEPAVVMGHSGE 842

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 843 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 902

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 903 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 955

Query: 616 NNLVI 620
           ++L I
Sbjct: 956 SSLKI 960



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 126/315 (40%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 E------HTHITDQPEDYEVEAGQSATFR--------CNAVSDPSLKLSIVWLRG----- 346
                  +  I     D E    +S+  R         NA +   L+ +++ L       
Sbjct: 238 VISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGL 297

Query: 347 SEPIDFESEP-------RFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             PI + ++        R V  N + +L +   SE DSG Y C A+  L  I    ++ V
Sbjct: 298 PTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRV 357

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 358 KAAPYWITAPQNLVL 372



 Score = 39.7 bits (91), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWI 253
           + C   ++L        +  L   P IT+    +Y +D +  +V+ C   G P P  +W 
Sbjct: 22  FLCQMISALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWT 81

Query: 254 HNQKELTGGRYTILE----TGDLKITDVAFADS----GEYTCFARNKLGTAQGSGSLTVK 305
            N       +  ++     TG L I  ++   +    G Y C ARN+ G A  +  +   
Sbjct: 82  RNGTHFDIDKDPLVTMKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRP 141

Query: 306 EHTHI--TDQPEDYEVEAGQSATFRC 329
             + +   ++ E   +++GQS    C
Sbjct: 142 SRSPLWTKEKLEPITLQSGQSLVLPC 167


>gi|1842427|gb|AAB47753.1| ankyrin binding cell adhesion molecule neurofascin, partial [Rattus
           norvegicus]
          Length = 1166

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/373 (35%), Positives = 192/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 239 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 297

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 298 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 356

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 357 WLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 416

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + + G L+I
Sbjct: 417 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYQNGSLEI 475

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 476 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 535

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 536 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKA 592

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 593 YLTVLADQATPTN 605



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 160/683 (23%), Positives = 264/683 (38%), Gaps = 93/683 (13%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 137 GLPSPVIFWMSTSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 195

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 196 KNPFTLKV-LTNNPYNDSSLRNHPDIYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLE 254

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 255 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 311

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N   L      
Sbjct: 312 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWLVNGDPLQSAPPN 370

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 371 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 428

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 429 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYQNG-SLEIKMIRKEDQGIYT 487

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 488 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKL 540

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTT-----------------TEVDKFVPASKNFARVLA 482
             +W + D    I   +  + +S T                 TE+D+ +  +K +  VLA
Sbjct: 541 TVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQDL--AKAYLTVLA 598

Query: 483 FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
                  P + + +   P+G P   + LE   L   +  L W+  +  N  +  Y ++++
Sbjct: 599 DQAT---PTNRLAAL--PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFE 653

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KY 596
             +  + G L +   +   P + ++ +  L P   Y   +    + G    S      + 
Sbjct: 654 EDQ-FQPGVLHDHSKF---PGSVNSAVLHLSPYVNYDFRVIAVNEVGSSHPSLPSERYRT 709

Query: 597 LFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF-WRRHNTGEAWNQDDV 655
               P  NP +V+G G+  NN+ I+WT M       P+ +Y I  WRR  T E WN  +V
Sbjct: 710 SGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYYIVKWRRRETRETWN--NV 767

Query: 656 LDWRQSELVLANQPTFQPYEIKV 678
             W  S  V+   P + PYEI+V
Sbjct: 768 TVW-GSRYVVGQTPVYVPYEIRV 789



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP+    I+V+++    + WN V P +++
Sbjct: 785  YEIRVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVK-IRVLNSTAISLQWNRVYPDTVQ 843

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 844  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVGRLFPYSNYKLEMVVVNGRG 903

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY ++Y    GT
Sbjct: 904  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLRYVPFNGT 963

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 964  KLGKQMVENF----SPNQTKFSVQRADPVSRYRFSLSARTQVGSG 1004



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 119/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 27  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 86

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 87  QCFARNKFGTALSNPIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 146

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
               E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 147 STSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 206

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 207 NPYNDSSLRNHPDIYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PD 264

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 265 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 322

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 323 APYWLDEPKNLIL 335



 Score = 47.0 bits (110), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 98/251 (39%), Gaps = 47/251 (18%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELT---GGRYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 7   LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 66

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+      ++  P    E+ +   
Sbjct: 67  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNPIRLQVSKSPLWPKENLDPVV 121

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 122 VQEGAPLTLQCNP--PPGLPSPVIFWMSTSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 177

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
              Y+C A+          T T+Q      + FTL         V++ NP +  SLR H 
Sbjct: 178 QTDYSCNARFHF-------THTIQ----QKNPFTL--------KVLTNNPYNDSSLRNHP 218

Query: 436 RGYKVQTWTEK 446
             Y  +   E+
Sbjct: 219 DIYSARGVAER 229


>gi|297483860|ref|XP_002693952.1| PREDICTED: neurofascin isoform 2 [Bos taurus]
 gi|296479434|tpg|DAA21549.1| TPA: neurofascin homolog (chicken) isoform 2 [Bos taurus]
          Length = 1173

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/391 (34%), Positives = 201/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 262 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 320

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 321 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 379

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 380 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 439

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 440 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 498

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 499 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 558

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  + SLT+   +E D G YTC A TELD   A+A
Sbjct: 559 PSLKLAVSWLKDDEPLYISNR---MKKEEDSLTIFGVAERDQGSYTCVASTELDQDLAKA 615

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 616 YLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 645



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 155/670 (23%), Positives = 258/670 (38%), Gaps = 83/670 (12%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 160 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 218

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 219 KNPFTLKV-LTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLE 277

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 278 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 334

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 335 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 393

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 394 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 451

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 452 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 510

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 511 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKL 563

Query: 441 QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII----- 495
                KD E      I N+ +     +  F  A ++        G+Y    S  +     
Sbjct: 564 AVSWLKDDEPL---YISNRMKKEEDSLTIFGVAERD-------QGSYTCVASTELDQDLA 613

Query: 496 -SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLE 554
            +++T  G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +
Sbjct: 614 KAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHD 672

Query: 555 RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNV 608
              +   P + ++ +  L P   Y+  +    + G    S      +     P  NP +V
Sbjct: 673 HSKF---PGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDV 729

Query: 609 EGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQ 668
           +G G+  NN+ I+WT M       P+ +Y + WRR  T E WN  +V  W  S  V+   
Sbjct: 730 KGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQT 786

Query: 669 PTFQPYEIKV 678
           P + PYEI+V
Sbjct: 787 PVYVPYEIRV 796



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 102/228 (44%), Gaps = 23/228 (10%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP++   I+V+++    + WN V   +++
Sbjct: 792  YEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVK-IRVLNSTAISLQWNRVYSDTVQ 850

Query: 433  GHFRGYKVQTWTEKDGEGSIRELIVNK--------GESTTTEVDKFVPASKNFARVLAFN 484
            G  R Y+   W E      ++ L V++        G+     V +  P S     ++  N
Sbjct: 851  GQLREYRAYYWRES---SLLKNLWVSQKRQQAGFPGDRLRGVVSRLFPYSNYKLEMVVVN 907

Query: 485  GAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
            G  +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY +KY + 
Sbjct: 908  GRGDGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLKYVAF 967

Query: 545  KGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             GTKVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 968  NGTKVGKQIVENF----SPNQTKFTVQRADPVSRYRFSLSARTQVGSG 1011



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 120/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N K   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 50  DNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 109

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 110 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 169

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 170 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 229

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 230 HPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PD 287

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 288 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 345

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 346 APYWLDEPKNLIL 358



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 87/213 (40%), Gaps = 29/213 (13%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L+  P IT+    ++ VD +  +++ C   G P P  +W  N K        R ++    
Sbjct: 30  LSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRRRS 89

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 90  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 144

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 145 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 200

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQVPLEAPSN 407
              Y+C A+      I+ +   T++V    P N
Sbjct: 201 QTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN 233


>gi|348531930|ref|XP_003453460.1| PREDICTED: protein sidekick-2-like [Oreochromis niloticus]
          Length = 2174

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 187/607 (30%), Positives = 272/607 (44%), Gaps = 36/607 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           R   V     +V + C+    PL +    W K+GV +N        ++ + L I     S
Sbjct: 202 RNTSVVTGTSEVTMECVANARPLIKLSISWRKNGVLVNSG----LSDFNRRLTILSPVVS 257

Query: 98  DQGSYTCEVSNGVGEAKSYSID--LSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPE 154
           D G Y CE         S S    L VL  P F  EPE  I A  E+ V   C+A G+P+
Sbjct: 258 DAGYYECEAILRSSSVPSVSAGAYLHVLEPPQFIKEPEKHITAEMEKVVDIPCQARGVPQ 317

Query: 155 PEIHWVHNGKPISQA-PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P+I W  +  PI     P  R  VG   + +  L   DTG + C A NS G V  + Y+ 
Sbjct: 318 PDIVWYKDALPIDPVRTPRYRVLVG-GSLQVNGLLPDDTGMFQCFARNSAGEVQTNTYLA 376

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V + AP IT  P D   +DG +V+L C   GAP+P + W   ++ L  G     R+T+LE
Sbjct: 377 VTSIAPNITAGPSDSTVIDGMSVILHCETSGAPRPAITWQKGERVLASGSVQLPRFTLLE 436

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A   
Sbjct: 437 SGSLLISPSHISDAGTYTCMASNSRGIDEASADLVVWARTRITTPPQDQSVIKGTKAIMN 496

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C    DPS+ +  VW +    I+ +S PR     D +L ++++   D G YTCR  +   
Sbjct: 497 CGVTHDPSVTVRHVWEKEGSVINVQSIPRMRLDADGTLHISQTWSGDIGTYTCRVTSVGG 556

Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV-VSWNPVSPQSLRGHFRGYKVQTWTEKD 447
                A L V+    AP N T +     K+A+ ++W    P         Y ++  +E +
Sbjct: 557 NDSRSAHLRVRQLPHAPENPTAVLSKSEKRAIDLAW--AKPFDGNSPLIRYILEV-SENN 613

Query: 448 GEGSIRELIVN-KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT-PEGVPG 505
              +I  L+ N + EST   V+  +PA     R+ A N    G  S+    V+ PE  P 
Sbjct: 614 APWAI--LLANIEPESTAVTVNGLIPARSYQFRLCAVNDVGKGQFSKETDRVSLPEEPPS 671

Query: 506 T-VQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              Q++ A    + +  ++W  P +   NG+L GY ++Y+ + G    P+  ++  IS P
Sbjct: 672 APPQNVIASGRTNQSIMIQWQPPPESHQNGILRGYIVRYR-LTGL---PVDNQIKNISSP 727

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNN 617
             T+  L  L   T Y I +A Y  AG G  S       L  VP   P NV+        
Sbjct: 728 DVTTLLLEDLIIWTNYEIEVAAYNGAGLGTFSHKVTEWTLQGVPTIAPGNVQAEAVNSTT 787

Query: 618 LVISWTA 624
           +  +WTA
Sbjct: 788 IRFTWTA 794



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 163/636 (25%), Positives = 244/636 (38%), Gaps = 99/636 (15%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE-VSNGVGEAK-SYSI 118
           P PQ  W +DG  I PS RI+      +L+I      D G Y  + V++  GE K S  I
Sbjct: 121 PQPQVTWFRDGRKIPPSSRIAI-TLDNTLVILSTVAPDAGRYYVQAVNDKNGENKTSQPI 179

Query: 119 DLSV--LAAPYFTVEPEFINAAEEET-------VTFECKASGLP--EPEIHWVHNGKPIS 167
            LSV  +  P   + P  I      +       VT EC A+  P  +  I W  NG  ++
Sbjct: 180 TLSVENVGGPADPIAPTIIIPPRNTSVVTGTSEVTMECVANARPLIKLSISWRKNGVLVN 239

Query: 168 QAPPNPRRKVGPNRITIENLRKSDTGNYGCNA---TNSLGYVYKDVYVNVLAHAPEITEA 224
               +  R     R+TI +   SD G Y C A   ++S+  V    Y++VL   P+  + 
Sbjct: 240 SGLSDFNR-----RLTILSPVVSDAGYYECEAILRSSSVPSVSAGAYLHVL-EPPQFIKE 293

Query: 225 PKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITDVAFA 280
           P+   T + + VV + C+  G P+P++ W  +      +   RY +L  G L++  +   
Sbjct: 294 PEKHITAEMEKVVDIPCQARGVPQPDIVWYKDALPIDPVRTPRYRVLVGGSLQVNGLLPD 353

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKE-HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           D+G + CFARN  G  Q +  L V     +IT  P D  V  G S    C     P  + 
Sbjct: 354 DTGMFQCFARNSAGEVQTNTYLAVTSIAPNITAGPSDSTVIDGMSVILHCETSGAP--RP 411

Query: 340 SIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +I W +G   +   S   PRF      SL ++ S   D+G YTC A       EA A L 
Sbjct: 412 AITWQKGERVLASGSVQLPRFTLLESGSLLISPSHISDAGTYTCMASNSRGIDEASADLV 471

Query: 398 V--QVPLEAP---------------------SNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
           V  +  +  P                      + T+  V + + +V++   +    L   
Sbjct: 472 VWARTRITTPPQDQSVIKGTKAIMNCGVTHDPSVTVRHVWEKEGSVINVQSIPRMRLDAD 531

Query: 435 FRGYKVQTWTEKDGEGSIRELIV--NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 492
              +  QTW+   G  + R   V  N   S    V +   A +N   VL+ +        
Sbjct: 532 GTLHISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQLPHAPENPTAVLSKS-------- 583

Query: 493 EIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPL 552
                                     A  L W KP   N  L+ Y ++  S        L
Sbjct: 584 -----------------------EKRAIDLAWAKPFDGNSPLIRYILEV-SENNAPWAIL 619

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV------PFKNPD 606
           L  +    +P +T+  + GL P+  Y+  L      G G  SK    V      P   P 
Sbjct: 620 LANI----EPESTAVTVNGLIPARSYQFRLCAVNDVGKGQFSKETDRVSLPEEPPSAPPQ 675

Query: 607 NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           NV   G T  +++I W   PE   N     Y + +R
Sbjct: 676 NVIASGRTNQSIMIQWQPPPESHQNGILRGYIVRYR 711



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 153/648 (23%), Positives = 247/648 (38%), Gaps = 70/648 (10%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEF 96
           K   A   K V++ C   G P P  +W KD +PI+P   +    Y    G SL +  +  
Sbjct: 296 KHITAEMEKVVDIPCQARGVPQPDIVWYKDALPIDP---VRTPRYRVLVGGSLQVNGLLP 352

Query: 97  SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE 156
            D G + C   N  GE ++ +       AP  T  P      +  +V   C+ SG P P 
Sbjct: 353 DDTGMFQCFARNSAGEVQTNTYLAVTSIAPNITAGPSDSTVIDGMSVILHCETSGAPRPA 412

Query: 157 IHWVHNGKPIS----QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYV 212
           I W    + ++    Q P     + G   I+  ++  SD G Y C A+NS G       +
Sbjct: 413 ITWQKGERVLASGSVQLPRFTLLESGSLLISPSHI--SDAGTYTCMASNSRGIDEASADL 470

Query: 213 NVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTIL 267
            V A    IT  P+D+  + G   ++ C V   P   V  +  ++          R  + 
Sbjct: 471 VVWART-RITTPPQDQSVIKGTKAIMNCGVTHDPSVTVRHVWEKEGSVINVQSIPRMRLD 529

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------EDYEVE 320
             G L I+     D G YTC   +  G    S  L V++  H  + P       E   ++
Sbjct: 530 ADGTLHISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQLPHAPENPTAVLSKSEKRAID 589

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEP-----IDFESEPRFVQSN------DYSLTVT 369
              +  F  N+   P ++  +     + P      + E E   V  N       Y   + 
Sbjct: 590 LAWAKPFDGNS---PLIRYILEVSENNAPWAILLANIEPESTAVTVNGLIPARSYQFRLC 646

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQ 429
             +++  GQ++     E D +        + P  AP    +      +  ++ W P    
Sbjct: 647 AVNDVGKGQFS----KETDRVSLP-----EEPPSAPPQNVIASGRTNQSIMIQWQPPPES 697

Query: 430 SLRGHFRGYKVQ-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
              G  RGY V+   T    +  I+   ++  + TT  ++  +  +     V A+NGA  
Sbjct: 698 HQNGILRGYIVRYRLTGLPVDNQIKN--ISSPDVTTLLLEDLIIWTNYEIEVAAYNGAGL 755

Query: 489 GPPSEIISFVTPEGVP----GTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKI-KY 541
           G  S  ++  T +GVP    G VQ+ EA+   S+     W  P     NG+  GYK+  +
Sbjct: 756 GTFSHKVTEWTLQGVPTIAPGNVQA-EAV--NSTTIRFTWTAPNPQFINGINQGYKLLAW 812

Query: 542 QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVP 601
           +  K  +V  +  R P   D +     + GL+  T+Y   +  +T  GDG  S       
Sbjct: 813 EPGKDDEVAMVTVR-PNFQD-SVHVGYVTGLKKFTEYYTSVLCFTTPGDGPRSPPKALRT 870

Query: 602 FKNPDNVEGRGS----TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
            ++     G  S       +L +SW+     E N     YRI W  +N
Sbjct: 871 HEDTPGAVGHLSFTEILDTSLKVSWSE--PSEKNGVLTGYRISWEEYN 916



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 144/593 (24%), Positives = 222/593 (37%), Gaps = 80/593 (13%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEV 106
           V L C   G P P   W K G  +  S  +    +      SL+I     SD G+YTC  
Sbjct: 399 VILHCETSGAPRPAITWQK-GERVLASGSVQLPRFTLLESGSLLISPSHISDAGTYTCMA 457

Query: 107 SN--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--WVHN 162
           SN  G+ EA   S DL V A    T  P+  +  +       C  +  P   +   W   
Sbjct: 458 SNSRGIDEA---SADLVVWARTRITTPPQDQSVIKGTKAIMNCGVTHDPSVTVRHVWEKE 514

Query: 163 GKPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAP 219
           G  I+ Q+ P  R       + I      D G Y C  T+  G   +  ++ V  L HAP
Sbjct: 515 GSVINVQSIPRMRLDAD-GTLHISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQLPHAP 573

Query: 220 EITEA---PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL-----ETGD 271
           E   A     ++  +D    +   + F    P + +I    E       +L     E+  
Sbjct: 574 ENPTAVLSKSEKRAID----LAWAKPFDGNSPLIRYILEVSENNAPWAILLANIEPESTA 629

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS--ATFRC 329
           + +  +  A S ++   A N +G  Q S      + T     PE+      Q+  A+ R 
Sbjct: 630 VTVNGLIPARSYQFRLCAVNDVGKGQFS------KETDRVSLPEEPPSAPPQNVIASGRT 683

Query: 330 NAVSDPSLKLSIVW-----------LRG--------SEPIDFE----SEPRFVQSNDYSL 366
           N        + I W           LRG          P+D +    S P         L
Sbjct: 684 NQ------SIMIQWQPPPESHQNGILRGYIVRYRLTGLPVDNQIKNISSPDVTTLLLEDL 737

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPV 426
            +  + E++   Y             + TL   VP  AP N    + +++     +W   
Sbjct: 738 IIWTNYEIEVAAYNGAGLGTFSHKVTEWTLQ-GVPTIAPGNVQ-AEAVNSTTIRFTWTAP 795

Query: 427 SPQSLRGHFRGYKVQTWTE-KDGEGSIRELIVNKGEST----TTEVDKFVPASKNFARVL 481
           +PQ + G  +GYK+  W   KD E ++  +  N  +S      T + KF   ++ +  VL
Sbjct: 796 NPQFINGINQGYKLLAWEPGKDDEVAMVTVRPNFQDSVHVGYVTGLKKF---TEYYTSVL 852

Query: 482 AFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY 541
            F    +GP S   +  T E  PG V  L    +  ++  + W +P + NGVL GY+I +
Sbjct: 853 CFTTPGDGPRSPPKALRTHEDTPGAVGHLSFTEILDTSLKVSWSEPSEKNGVLTGYRISW 912

Query: 542 QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           +    T       R+ +     T   ++ GL   T Y I +AG T  G G  S
Sbjct: 913 EEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAGMTSKGQGMLS 960



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 132/306 (43%), Gaps = 43/306 (14%)

Query: 379  YTCRAQTELDFIEAQATLTVQVPLEA---PSNFTLI--QVIDAKKAVVSWNP----VSPQ 429
            +   AQT   + EA   L V     A   P++  L+  + + A++ ++SW P    +SP 
Sbjct: 1353 FRITAQTRKGWGEAAEALVVTTEKRARPQPTSRPLVPQKHVQARQVLLSWEPGSDGLSP- 1411

Query: 430  SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
                  R Y VQ     +   ++    V+  E+TT  V +  P +    R+ A N   + 
Sbjct: 1412 -----VRYYTVQLRELPESNWTVHSASVSH-EATTYIVSRLKPFTSYQFRIKATNDIGDS 1465

Query: 490  PPS-EIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVK 545
              S E  +  T + VP    S L   P  +++  ++W  P  E+ NG+L+G++I+Y+ + 
Sbjct: 1466 EYSQESEAITTLQDVPDEAPSILSVTPHTTTSVLIRWQPPSEEKINGILLGFRIRYRELL 1525

Query: 546  GTKVGPLLERL-----------PY----ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGD 590
              ++   +  +           PY    +SD T T  +L  L    +Y I ++ Y   G+
Sbjct: 1526 YDRLRSYIHTVNSASAWAELSAPYSLRNLSDSTLTQYELDKLSKHKRYEIRMSVYNAVGE 1585

Query: 591  GAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI-FW--R 642
            G  S  + +F    VP   P NV  + +T   L ++W   P    N     Y+I FW  +
Sbjct: 1586 GPTSPPQEVFVGEAVPTAPPQNVAIQSATATQLDVTWDPPPVDAQNGDIQGYKIYFWEFQ 1645

Query: 643  RHNTGE 648
            R N  E
Sbjct: 1646 RKNETE 1651



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 101/273 (36%), Gaps = 27/273 (9%)

Query: 126 PYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
           PYF  EP       E   +   C A G    E  W+HN   ++       R     R  I
Sbjct: 6   PYFKTEPVRSQLHLERNRLVLTCMAEGSWPLEFKWIHNSTELT-------RFSLEYRYLI 58

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RVF 243
            +L +S  G Y C   N +G + +      +A      E  + +    G+  V+   R+ 
Sbjct: 59  PSLDRSHAGFYRCIVRNRVGALLQRRTEVQVAFMGSFEEGERTQSVSQGEGAVIPAPRIR 118

Query: 244 GAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSGS 301
             P+P+V W  + +++    R  I     L I      D+G Y   A N K G  + S  
Sbjct: 119 SFPQPQVTWFRDGRKIPPSSRIAITLDNTLVILSTVAPDAGRYYVQAVNDKNGENKTSQP 178

Query: 302 LTVK----------EHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEPI 350
           +T+               I   P +  V  G S  T  C A + P +KLSI W +    +
Sbjct: 179 ITLSVENVGGPADPIAPTIIIPPRNTSVVTGTSEVTMECVANARPLIKLSISWRKNGVLV 238

Query: 351 DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +       +   +  LT+      D+G Y C A
Sbjct: 239 N-----SGLSDFNRRLTILSPVVSDAGYYECEA 266



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 22/186 (11%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW--TEKDGEGSIRELIV 457
            VP   P N   IQ   A +  V+W+P    +  G  +GYK+  W    K+    +R L +
Sbjct: 1600 VPTAPPQNVA-IQSATATQLDVTWDPPPVDAQNGDIQGYKIYFWEFQRKNETERMRTLFM 1658

Query: 458  NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS 517
             +G     ++      +     V  FN A +GP S      T +  P     +    L +
Sbjct: 1659 PEG---GVKLKNLTGYTTYMISVAPFNAAGDGPRSPPTRGRTQQAAPSAPSFIHFSELTT 1715

Query: 518  SAFYLKWVKPEQPNGVLMGYKIKYQ--------------SVKGTKVGPLLERLPYISDPT 563
            ++  + W +P  PNG++ GY++ Y+               VKGT  GPL  ++  ++D  
Sbjct: 1716 TSVNVSWGEPTFPNGIIEGYRLVYEPSTPVDGVSKTVTVDVKGT--GPLWLKIRDLADGV 1773

Query: 564  TTSAKL 569
            T + ++
Sbjct: 1774 TYNFRI 1779



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 81/199 (40%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N +      +   +V W  V      G   GYKV  + EKD +  +    V  
Sbjct: 1178 VPSSGPTNVSAFATT-SSSILVRWFEVPEPDRNGLILGYKV-VYKEKDSDSPVHFWTVEG 1235

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              + + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1236 NATHSVQLTGLGKYVLYEIQVLAFTRIGDGRPSSPPILERTLDDVPGPPVGILFPEVRTT 1295

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P QPNG+++ Y+I Y           ++ L    +P+     +  L+P T Y
Sbjct: 1296 SVRLIWQSPAQPNGIILAYQITYHLNSTNSNTATVDVL----NPSARQYTVTNLKPETVY 1351

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1352 VFRITAQTRKGWGEAAEAL 1370



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 66/308 (21%), Positives = 126/308 (40%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q  L    + +T++  VP E P   T + + +          
Sbjct: 938  LTALTTYTIEVAGMTSKGQGML----SSSTISSGVPPELPGPPTNMAISN---------- 983

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE--------LIVNKGESTTTEVDKFVP 472
            + P+S+   F+ GY  +T    W  +   G++ E         + N+ E+ + EV    P
Sbjct: 984  IGPRSINLQFKPGYDGKTSISRWLVEAQVGAVGENEDWLMVHQVFNEPEARSLEVPGLNP 1043

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 1044 YTFYRFRMRQVNIVGTSPPSQPSRKIQTLPAPPDMAPANVTLRTA---SETSLWLRWMPL 1100

Query: 527  PE---QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GY+++Y S  G++  PL      I+D       +  LE  T+Y + + 
Sbjct: 1101 PEWEYNGNAEQVGYRVQY-SRAGSQGHPLTH---VITDRLEREFTIEDLEEWTEYEVRVQ 1156

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
                 G G  S+ +       VP   P NV    +T +++++ W  +PE + N     Y+
Sbjct: 1157 AVNGIGVGPWSQPVRGRTRESVPSSGPTNVSAFATTSSSILVRWFEVPEPDRNGLILGYK 1216

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1217 VVYKEKDS 1224


>gi|350588710|ref|XP_003357453.2| PREDICTED: neurofascin-like, partial [Sus scrofa]
          Length = 1197

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/373 (35%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 206 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKLENFNKALRITNVSEED 264

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 265 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 323

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 324 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 383

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 384 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 442

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 443 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAQRGTTVQLECRVKHD 502

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  + SLT+   +E D G YTC A TELD   A+A
Sbjct: 503 PSLKLTVSWLKDDEPLYIGNR---MKKEEDSLTIFGVAERDQGSYTCVASTELDQDLAKA 559

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 560 YLTVLADQATPTN 572



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 156/666 (23%), Positives = 257/666 (38%), Gaps = 77/666 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEVSNGVGEA--K 114
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C           +
Sbjct: 121 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 179

Query: 115 SYSIDLSVLAA------------PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
               +L VL              P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 180 KNPFNLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 237

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 238 GGDL---PSDKAKLENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 293

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 294 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 351

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 352 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 411

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 412 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 470

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIREL 455
            V+ P       T I  +   +       V  +    H    K+  +W + D    I   
Sbjct: 471 EVKDP-------TRIYRMPEDQVAQRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNR 523

Query: 456 IVNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
           +  + +S T                 TE+D+ +  +K +  VLA       P + + +  
Sbjct: 524 MKKEEDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLADQAT---PTNRLAAL- 577

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
            P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   +
Sbjct: 578 -PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKF 635

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRG 612
              P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G
Sbjct: 636 ---PGSVNSAVLQLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEG 692

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
           +  NN+ I+WT M       P+ +Y + WRR  T E WN  +V  W  S  V+   P + 
Sbjct: 693 TRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQTPVYV 749

Query: 673 PYEIKV 678
           PYEI+V
Sbjct: 750 PYEIRV 755



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 9/172 (5%)

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           ++W P++  S  G    Y V+ W  ++   +   + V        +   +VP      RV
Sbjct: 700 ITWTPMNATSAFGPNLRYIVK-WRRRETRETWNNVTVWGSRYVVGQTPVYVPYE---IRV 755

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
            A N    GP  + +   + E +P   +             L+W  PE PNG+L+GY +K
Sbjct: 756 QAENDFGKGPEPDTVIGYSGEDLPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLK 815

Query: 541 YQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           Y +  GTKVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 816 YVAFNGTKVGKQIVENF----SPNQTKFTVQRADPVSRYRFSLSARTQVGSG 863


>gi|410908413|ref|XP_003967685.1| PREDICTED: neuronal cell adhesion molecule-like [Takifugu rubripes]
          Length = 1288

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 206/722 (28%), Positives = 300/722 (41%), Gaps = 75/722 (10%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           +R     LR + +E+ CI  G P P+  W+K    + P+ R S  +Y K+L I  V  SD
Sbjct: 259 SRPSMTVLRGQVLEMECIAEGLPTPEISWTKVSGDL-PAKRTSFLHYQKTLRIVDVSESD 317

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECKASGLPEPEI 157
            G Y C   N +G  +  +I + V AAPY+   P + +  A  E+    C+ASG P+P I
Sbjct: 318 AGEYCCVARNQLGSVQQ-TIHVMVKAAPYWISGPSKNLVLAPGESGVLTCRASGTPKPSI 376

Query: 158 HWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAH 217
            W  NG  I  AP +P RKV  + I   +++   +  Y CN +N  GY+  + +VNVL+ 
Sbjct: 377 SWAMNGISIENAPADPSRKVEDDTIIFADVQSGSSAVYQCNVSNDYGYLLSNAFVNVLSE 436

Query: 218 APEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT--GGRYTILETGDLKI 274
            P + T A K    +  +  ++ C  FG+P P++ W    +  T     Y     G L++
Sbjct: 437 PPRVLTPANKVYQVIKNQRALIDCASFGSPVPQITWFKESRSSTMDSQAYITHTNGTLEM 496

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
                 +SG+YTC ARN LG  +    L VKE T I  QPE   V+ G+S  F C    D
Sbjct: 497 RTAQAHNSGKYTCVARNSLGIYENHVYLQVKEPTRILKQPEYKVVQRGRSVVFECKVKHD 556

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           P+L  +I WL+     +   + R +  +D SLT+T  SE D+G YTC   T LD   A A
Sbjct: 557 PTLTPTITWLKDDG--ELPDDERLILESD-SLTITDVSESDAGVYTCVTNTTLDQDSASA 613

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVV--SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSI 452
            LTV   +E P   T +++ D KK  V  +W P    +     + + VQ        G  
Sbjct: 614 ELTV---VERPDPPTDLELTDKKKRSVQLTWTPGDEHN--SPIQKFLVQYEDSLHHHGHW 668

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNG-AYNGP--PSEIIS--FVTPEGVPGTV 507
             L    G  TTT + K  P      RVLA N   ++ P  PS ++      P+  P  V
Sbjct: 669 HNLTEVPGTKTTTHL-KLSPYVHYTFRVLALNDVGFSRPSFPSRMLKTEAAAPDQNPAGV 727

Query: 508 QSLEAIPLGSSAFYLKWVKP---EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT 564
           Q             + W KP    Q NG  + Y++ ++         L      ++    
Sbjct: 728 QGFGT---EHDNLVISW-KPLSGLQANGPGLHYRVMWRQKD------LDSEWTSVTVANN 777

Query: 565 TSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLV 619
           +   ++G      Y + +      G G E           +P   PDNV+          
Sbjct: 778 SKFVVSGTPTFAPYELKVQAVNDYGAGPEPAVALGFSGEDLPLAAPDNVQSMVLNSTVAE 837

Query: 620 ISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVV 679
           I W  +P           R+  R H  G       V  WR+  L   N            
Sbjct: 838 IHWDPVPS----------RLL-RGHLKGFK-----VYYWRERSLHRHN------------ 869

Query: 680 QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 739
                  G  + + ++   G  T   +    P S     V  +NG   GPPS    F TP
Sbjct: 870 -------GHHTEKHILNFSGNHTRGVLPGLHPFSLYLFNVRVYNGRGEGPPSATQQFETP 922

Query: 740 EG 741
           EG
Sbjct: 923 EG 924



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 154/629 (24%), Positives = 240/629 (38%), Gaps = 89/629 (14%)

Query: 53  LFCIFGGTPLPQTIWSKDGV-----PINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   GTP P   W+ +G+     P +PS ++       ++I   V+      Y C VS
Sbjct: 364 LTCRASGTPKPSISWAMNGISIENAPADPSRKVED----DTIIFADVQSGSSAVYQCNVS 419

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   S +  ++VL+ P   + P  +     + +    +C + G P P+I W    + 
Sbjct: 420 NDYGYLLSNAF-VNVLSEPPRVLTPANKVYQVIKNQRALIDCASFGSPVPQITWFKESRS 478

Query: 166 ISQAPPNPRRKVGPNRITIE--NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            +    + +  +     T+E    +  ++G Y C A NSLG     VY+ V      I +
Sbjct: 479 STM---DSQAYITHTNGTLEMRTAQAHNSGKYTCVARNSLGIYENHVYLQV-KEPTRILK 534

Query: 224 APKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
            P+ +    G++VV  C+V   P   P + W+ +  EL      ILE+  L ITDV+ +D
Sbjct: 535 QPEYKVVQRGRSVVFECKVKHDPTLTPTITWLKDDGELPDDERLILESDSLTITDVSESD 594

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC     L     S  LTV E     D P D E+   +  +            + +
Sbjct: 595 AGVYTCVTNTTLDQDSASAELTVVERP---DPPTDLELTDKKKRS------------VQL 639

Query: 342 VWLRGSE---PIDFESEPRFVQSND--------YSLTVTKSSELDSG-------QYTCRA 383
            W  G E   PI    +   VQ  D        ++LT    ++  +         YT R 
Sbjct: 640 TWTPGDEHNSPI----QKFLVQYEDSLHHHGHWHNLTEVPGTKTTTHLKLSPYVHYTFRV 695

Query: 384 QTELD-------FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR 436
               D       F           P + P+        +    V+SW P+S     G   
Sbjct: 696 LALNDVGFSRPSFPSRMLKTEAAAPDQNPAGVQGFGT-EHDNLVISWKPLSGLQANGPGL 754

Query: 437 GYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEI 494
            Y+V  W +KD +     + V N  +   +    F P      +V A N    GP P+  
Sbjct: 755 HYRVM-WRQKDLDSEWTSVTVANNSKFVVSGTPTFAPYE---LKVQAVNDYGAGPEPAVA 810

Query: 495 ISFV---TPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKV 549
           + F     P   P  VQS+    L S+   + W  V      G L G+K+ Y   +    
Sbjct: 811 LGFSGEDLPLAAPDNVQSMV---LNSTVAEIHWDPVPSRLLRGHLKGFKVYYWRERSLHR 867

Query: 550 --GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDN 607
             G   E+         T   L GL P + Y  ++  Y   G+G  S       F+ P+ 
Sbjct: 868 HNGHHTEKHILNFSGNHTRGVLPGLHPFSLYLFNVRVYNGRGEGPPSATQ---QFETPEG 924

Query: 608 VEGRGSTPNNLVISWTAMPE--IEHNAPH 634
           V G    P +L++S   +    +E N PH
Sbjct: 925 VPG---APTSLIVSRVNLDSLTLEWNPPH 950



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 101/198 (51%), Gaps = 10/198 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK-----DGEGSIRE 454
            +PL AP N   + V+++  A + W+PV  + LRGH +G+KV  W E+     +G  + + 
Sbjct: 818  LPLAAPDNVQSM-VLNSTVAEIHWDPVPSRLLRGHLKGFKVYYWRERSLHRHNGHHTEKH 876

Query: 455  LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
            ++   G  T   +    P S     V  +NG   GPPS    F TPEGVPG   SL    
Sbjct: 877  ILNFSGNHTRGVLPGLHPFSLYLFNVRVYNGRGEGPPSATQQFETPEGVPGAPTSLIVSR 936

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLE 573
            +   +  L+W  P   NG + GY ++YQ V  + ++GP  E+L   ++   TS  L+ L+
Sbjct: 937  VNLDSLTLEWNPPHVHNGHITGYTLEYQPVNSSNELGP-KEKLALPAN--ETSVTLSNLK 993

Query: 574  PSTKYRIHLAGYTKAGDG 591
             ST+Y+ +L   T  G G
Sbjct: 994  YSTRYKFYLNAKTVRGAG 1011



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 114/303 (37%), Gaps = 53/303 (17%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKP--------ISQAPPNPRRKVGPNRITIENLRKSDT 192
           E +   C+A G P P   W  NG          ++  P +    V  +R+  E       
Sbjct: 48  EDIIIHCEAKGKPHPSFSWTRNGTHFDIDDDPNVTMRPHSGTLVVDISRVKAEQYECV-- 105

Query: 193 GNYGCNATNSLGYVYKDVYVNVLAHAPEIT-EAPKDEYTVDGKTVVLTCR-VFGAPKPEV 250
             Y C A N  G    +  V   + +P  + E  K     +G ++VL CR   G P P +
Sbjct: 106 --YQCTARNKHGTAVSNNIVVRQSRSPLWSKERIKPLVVQEGVSLVLPCRPPAGLPPPVI 163

Query: 251 NWIHN--QKELTGGRYTILETGDLKITDVAFADS-GEYTCFARNKLG-TAQGSGSLTVKE 306
            W+ N  Q+     R +    GDL  ++V   DS  +Y C+AR     T Q    +TVK 
Sbjct: 164 FWMDNNFQRLPQSSRVSQSLNGDLYFSNVLREDSRNDYICYARFPYTQTIQQKQPITVKV 223

Query: 307 HTH----------------ITDQPED-------------YEVEAGQSATFRCNAVSDPSL 337
            T                  ++ P +               V  GQ     C A   P+ 
Sbjct: 224 LTMDAINDTMAALYNDTDLFSEAPAEERKPAFLIPSRPSMTVLRGQVLEMECIAEGLPTP 283

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           ++S   + G  P    S   + +    +L +   SE D+G+Y C A+ +L  +  Q T+ 
Sbjct: 284 EISWTKVSGDLPAKRTSFLHYQK----TLRIVDVSESDAGEYCCVARNQLGSV--QQTIH 337

Query: 398 VQV 400
           V V
Sbjct: 338 VMV 340


>gi|358415963|ref|XP_590378.6| PREDICTED: neurofascin [Bos taurus]
          Length = 1215

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/373 (35%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 230 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 288

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 289 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 347

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 348 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 407

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 408 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 466

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 467 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 526

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  + SLT+   +E D G YTC A TELD   A+A
Sbjct: 527 PSLKLAVSWLKDDEPLYISNR---MKKEEDSLTIFGVAERDQGSYTCVASTELDQDLAKA 583

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 584 YLTVLADQATPTN 596



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 153/666 (22%), Positives = 260/666 (39%), Gaps = 77/666 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 145 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 203

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 204 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 261

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 262 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 317

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 318 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 375

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 376 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 435

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 436 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 494

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIREL 455
            V+ P       T I  +   +       V  +    H    K+  +W + D    I   
Sbjct: 495 EVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLAVSWLKDDEPLYISNR 547

Query: 456 IVNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
           +  + +S T                 TE+D+ +  +K +  VLA       P + + +  
Sbjct: 548 MKKEEDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLADQAT---PTNRLAAL- 601

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
            P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   +
Sbjct: 602 -PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKF 659

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRG 612
              P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G
Sbjct: 660 ---PGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEG 716

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
           +  NN+ I+WT M       P+ +Y + WRR  T E WN  +V  W  S  V+   P + 
Sbjct: 717 TRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQTPVYV 773

Query: 673 PYEIKV 678
           PYEI+V
Sbjct: 774 PYEIRV 779



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 9/172 (5%)

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           ++W P++  S  G    Y V+ W  ++   +   + V        +   +VP      RV
Sbjct: 724 ITWTPMNATSAFGPNLRYIVK-WRRRETRETWNNVTVWGSRYVVGQTPVYVPYE---IRV 779

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
            A N    GP  + +   + E +P   +             L+W  PE PNG+L+GY +K
Sbjct: 780 QAENDFGKGPEPDTVIGYSGEDLPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLK 839

Query: 541 YQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           Y +  GTKVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 840 YVAFNGTKVGKQIVENF----SPNQTKFTVQRADPVSRYRFSLSARTQVGSG 887



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 117/296 (39%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N K   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 35  DNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 94

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 95  QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 154

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK---- 305
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K    
Sbjct: 155 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 214

Query: 306 ----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
               E T     P+       V  G      C A   P+    I W +     D  S+  
Sbjct: 215 RGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 270

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 271 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 326



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L+  P IT+    ++ VD +  +++ C   G P P  +W  N K        R ++  
Sbjct: 13  NELSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRR 72

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
                + D           GEY CFARNK GTA     L+ +    ++  P    E+ + 
Sbjct: 73  RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 127

Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 128 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 183

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
           D    Y+C A+      I+ +   T++V
Sbjct: 184 DMQTDYSCNARFHFTHTIQQKNPFTLKV 211


>gi|359073801|ref|XP_003587093.1| PREDICTED: neurofascin [Bos taurus]
 gi|296479435|tpg|DAA21550.1| TPA: neurofascin homolog (chicken) isoform 3 [Bos taurus]
          Length = 1188

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/373 (35%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 262 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 320

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 321 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 379

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 380 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 439

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 440 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 498

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 499 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 558

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  + SLT+   +E D G YTC A TELD   A+A
Sbjct: 559 PSLKLAVSWLKDDEPLYISNR---MKKEEDSLTIFGVAERDQGSYTCVASTELDQDLAKA 615

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 616 YLTVLADQATPTN 628



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 158/682 (23%), Positives = 265/682 (38%), Gaps = 92/682 (13%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 160 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 218

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 219 KNPFTLKV-LTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLE 277

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 278 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 334

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 335 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 393

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 394 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 451

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 452 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 510

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   +       V  +    H    K+
Sbjct: 511 CVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKL 563

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTT-----------------TEVDKFVPASKNFARVLA 482
             +W + D    I   +  + +S T                 TE+D+ +  +K +  VLA
Sbjct: 564 AVSWLKDDEPLYISNRMKKEEDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLA 621

Query: 483 FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
                  P + + +   P+G P   + LE   L   +  L W+  +  N  +  Y ++++
Sbjct: 622 DQAT---PTNRLAAL--PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFE 676

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KY 596
             +  + G   +   +   P + ++ +  L P   Y+  +    + G    S      + 
Sbjct: 677 EDQ-FQPGVWHDHSKF---PGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRT 732

Query: 597 LFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVL 656
               P  NP +V+G G+  NN+ I+WT M       P+ +Y + WRR  T E WN  +V 
Sbjct: 733 SGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVT 790

Query: 657 DWRQSELVLANQPTFQPYEIKV 678
            W  S  V+   P + PYEI+V
Sbjct: 791 VW-GSRYVVGQTPVYVPYEIRV 811



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 102/228 (44%), Gaps = 23/228 (10%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP++   I+V+++    + WN V   +++
Sbjct: 807  YEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVK-IRVLNSTAISLQWNRVYSDTVQ 865

Query: 433  GHFRGYKVQTWTEKDGEGSIRELIVNK--------GESTTTEVDKFVPASKNFARVLAFN 484
            G  R Y+   W E      ++ L V++        G+     V +  P S     ++  N
Sbjct: 866  GQLREYRAYYWRES---SLLKNLWVSQKRQQAGFPGDRLRGVVSRLFPYSNYKLEMVVVN 922

Query: 485  GAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
            G  +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY +KY + 
Sbjct: 923  GRGDGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLKYVAF 982

Query: 545  KGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             GTKVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 983  NGTKVGKQIVENF----SPNQTKFTVQRADPVSRYRFSLSARTQVGSG 1026



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 120/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N K   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 50  DNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 109

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 110 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 169

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 170 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 229

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 230 HPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PD 287

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 288 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 345

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 346 APYWLDEPKNLIL 358



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 87/213 (40%), Gaps = 29/213 (13%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L+  P IT+    ++ VD +  +++ C   G P P  +W  N K        R ++    
Sbjct: 30  LSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRRRS 89

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 90  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 144

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 145 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 200

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQVPLEAPSN 407
              Y+C A+      I+ +   T++V    P N
Sbjct: 201 QTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN 233


>gi|237858634|ref|NP_001153790.1| neurofascin isoform 4 precursor [Mus musculus]
          Length = 1157

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/390 (34%), Positives = 197/390 (50%), Gaps = 9/390 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PS++    N+ K+L I +V   D
Sbjct: 246 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSNKAKFENFNKALRITNVSEED 304

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 305 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 363

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 364 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 423

Query: 219 PEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKIT 275
           P +  A      V       L C  FG+P P + W  N +   L GG Y + E G L+I 
Sbjct: 424 PRMLSARNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIK 483

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
            +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    DP
Sbjct: 484 MIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHDP 543

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
           SLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A 
Sbjct: 544 SLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKAY 600

Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           LTV    + P +  L  + + +   ++W P
Sbjct: 601 LTVLGRPDRPRDLELTDLAE-RSVRLTWIP 629



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 152/656 (23%), Positives = 256/656 (39%), Gaps = 72/656 (10%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAA-----PYFTVEPEFINAAEE----ETVTFECKASGLPEPEIHWVHNG 163
              +++ +          P F + P+  ++++       +  EC ASG+P P+I W   G
Sbjct: 220 KNPFTLKVLTTRGVAERTPSF-MYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKG 278

Query: 164 KPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
             +   P N  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP   
Sbjct: 279 GDL---PSNKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYWL 334

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDV 277
           + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D 
Sbjct: 335 DEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRDT 392

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKE--HTHITDQPEDYEVEAGQSATFRCNAVSDP 335
             +    Y C   N+ G    +  ++V +     ++ + +   V         C     P
Sbjct: 393 QISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSARNQLIRVILYNRTRLDCPFFGSP 452

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
              L   W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  
Sbjct: 453 IPTLR--WFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVR 509

Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIRE 454
           L V+ P       T I  +   +       V  +    H    K+  +W + D    I  
Sbjct: 510 LEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 562

Query: 455 LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII------SFVTPEGVPGTVQ 508
            +  + +S T            F       G+Y    S  +      +++T  G P   +
Sbjct: 563 RMKKEDDSLTI-----------FGVAERDQGSYTCMASTELDQDLAKAYLTVLGRPDRPR 611

Query: 509 SLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
            LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   +   P + ++ 
Sbjct: 612 DLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSRF---PGSVNSA 667

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISW 622
           +  L P   Y+  +    + G    S      +     P  NP +V+G G+  NN+ I+W
Sbjct: 668 VLHLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITW 727

Query: 623 TAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           T M       P+ +Y + WRR  T E WN  +V  W  S  V+   P + PYEI+V
Sbjct: 728 TPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQTPVYVPYEIRV 780



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 17/225 (7%)

Query: 379 YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           Y  R Q E DF +     T+        P  AP+    I+V+++    + WN V   +++
Sbjct: 776 YEIRVQAENDFGKGPEPDTIIGYSGEDYPRAAPTEVK-IRVLNSTAISLQWNRVYSDTVQ 834

Query: 433 GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
           G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 835 GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVARLFPYSNYKLEMVVVNGRG 894

Query: 488 NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
           +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY ++Y    GT
Sbjct: 895 DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYILRYVPFNGT 954

Query: 548 KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 955 KLGKQMVENF----SPNQTKFSVQRADPVSRYRFSLSARTQVGSG 995



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 119/296 (40%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T 
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 230

Query: 310 --ITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             + ++   +    G S++            C A   P+    I W +     D  S   
Sbjct: 231 RGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSNKA 286

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 287 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 342



 Score = 46.2 bits (108), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 29/206 (14%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQV 400
              Y+C A+      I+ +   T++V
Sbjct: 202 QTDYSCNARFHFTHTIQQKNPFTLKV 227


>gi|297483858|ref|XP_002693951.1| PREDICTED: neurofascin isoform 1 [Bos taurus]
 gi|296479433|tpg|DAA21548.1| TPA: neurofascin homolog (chicken) isoform 1 [Bos taurus]
          Length = 1236

 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 133/373 (35%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 251 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 309

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 310 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 368

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 369 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 428

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 429 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 487

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 488 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 547

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  + SLT+   +E D G YTC A TELD   A+A
Sbjct: 548 PSLKLAVSWLKDDEPLYISNR---MKKEEDSLTIFGVAERDQGSYTCVASTELDQDLAKA 604

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 605 YLTVLADQATPTN 617



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 153/666 (22%), Positives = 260/666 (39%), Gaps = 77/666 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 166 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 224

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 225 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 282

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 283 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 338

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 339 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 396

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 397 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 456

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 457 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 515

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIREL 455
            V+ P       T I  +   +       V  +    H    K+  +W + D    I   
Sbjct: 516 EVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLAVSWLKDDEPLYISNR 568

Query: 456 IVNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
           +  + +S T                 TE+D+ +  +K +  VLA       P + + +  
Sbjct: 569 MKKEEDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLADQAT---PTNRLAAL- 622

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
            P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   +
Sbjct: 623 -PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKF 680

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRG 612
              P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G
Sbjct: 681 ---PGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEG 737

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
           +  NN+ I+WT M       P+ +Y + WRR  T E WN  +V  W  S  V+   P + 
Sbjct: 738 TRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQTPVYV 794

Query: 673 PYEIKV 678
           PYEI+V
Sbjct: 795 PYEIRV 800



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 9/172 (5%)

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           ++W P++  S  G    Y V+ W  ++   +   + V        +   +VP      RV
Sbjct: 745 ITWTPMNATSAFGPNLRYIVK-WRRRETRETWNNVTVWGSRYVVGQTPVYVPYE---IRV 800

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
            A N    GP  + +   + E +P   +             L+W  PE PNG+L+GY +K
Sbjct: 801 QAENDFGKGPEPDTVIGYSGEDLPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLK 860

Query: 541 YQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           Y +  GTKVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 861 YVAFNGTKVGKQIVENF----SPNQTKFTVQRADPVSRYRFSLSARTQVGSG 908



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 117/296 (39%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N K   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 56  DNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 115

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 116 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 175

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK---- 305
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K    
Sbjct: 176 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 235

Query: 306 ----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
               E T     P+       V  G      C A   P+    I W +     D  S+  
Sbjct: 236 RGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 291

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 292 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 347



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L+  P IT+    ++ VD +  +++ C   G P P  +W  N K        R ++  
Sbjct: 34  NELSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRR 93

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
                + D           GEY CFARNK GTA     L+ +    ++  P    E+ + 
Sbjct: 94  RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 148

Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 149 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 204

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
           D    Y+C A+      I+ +   T++V
Sbjct: 205 DMQTDYSCNARFHFTHTIQQKNPFTLKV 232


>gi|237858632|ref|NP_001153789.1| neurofascin isoform 3 precursor [Mus musculus]
          Length = 1174

 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 136/390 (34%), Positives = 197/390 (50%), Gaps = 9/390 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PS++    N+ K+L I +V   D
Sbjct: 263 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSNKAKFENFNKALRITNVSEED 321

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 322 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 380

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 381 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 440

Query: 219 PEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKIT 275
           P +  A      V       L C  FG+P P + W  N +   L GG Y + E G L+I 
Sbjct: 441 PRMLSARNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIK 500

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
            +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    DP
Sbjct: 501 MIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHDP 560

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
           SLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A 
Sbjct: 561 SLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKAY 617

Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           LTV    + P +  L  + + +   ++W P
Sbjct: 618 LTVLGRPDRPRDLELTDLAE-RSVRLTWIP 646



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 156/673 (23%), Positives = 257/673 (38%), Gaps = 89/673 (13%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 220 KNPFTLKV-LTNNPYNDSSLRNHPDIYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLE 278

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P N  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 279 CIASGVPTPDIAWYKKGGDL---PSNKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 335

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 336 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 394

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE--HTHITDQPEDYE 318
             R    +T  +   D   +    Y C   N+ G    +  ++V +     ++ + +   
Sbjct: 395 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSARNQLIR 452

Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQ 378
           V         C     P   L   W +  +  + +     V  N  SL +    + D G 
Sbjct: 453 VILYNRTRLDCPFFGSPIPTLR--WFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGI 509

Query: 379 YTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGY 438
           YTC A   L   E Q  L V+ P       T I  +   +       V  +    H    
Sbjct: 510 YTCVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSL 562

Query: 439 KVQ-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-- 495
           K+  +W + D    I   +  + +S T            F       G+Y    S  +  
Sbjct: 563 KLTVSWLKDDEPLYIGNRMKKEDDSLTI-----------FGVAERDQGSYTCMASTELDQ 611

Query: 496 ----SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP 551
               +++T  G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G 
Sbjct: 612 DLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGV 670

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNP 605
             +   +   P + ++ +  L P   Y+  +    + G    S      +     P  NP
Sbjct: 671 WHDHSRF---PGSVNSAVLHLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNP 727

Query: 606 DNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVL 665
            +V+G G+  NN+ I+WT M       P+ +Y + WRR  T E WN  +V  W  S  V+
Sbjct: 728 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVV 784

Query: 666 ANQPTFQPYEIKV 678
              P + PYEI+V
Sbjct: 785 GQTPVYVPYEIRV 797



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     T+        P  AP+    I+V+++    + WN V   +++
Sbjct: 793  YEIRVQAENDFGKGPEPDTIIGYSGEDYPRAAPTEVK-IRVLNSTAISLQWNRVYSDTVQ 851

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 852  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVARLFPYSNYKLEMVVVNGRG 911

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY ++Y    GT
Sbjct: 912  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYILRYVPFNGT 971

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 972  KLGKQMVENF----SPNQTKFSVQRADPVSRYRFSLSARTQVGSG 1012



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 119/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 230

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 231 NPYNDSSLRNHPDIYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PD 288

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S     ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 289 IAWYKKGG--DLPSNKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 346

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 347 APYWLDEPKNLIL 359



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 99/251 (39%), Gaps = 47/251 (18%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
              Y+C A+          T T+Q      + FTL         V++ NP +  SLR H 
Sbjct: 202 QTDYSCNARFHF-------THTIQ----QKNPFTL--------KVLTNNPYNDSSLRNHP 242

Query: 436 RGYKVQTWTEK 446
             Y  +   E+
Sbjct: 243 DIYSARGVAER 253


>gi|37360078|dbj|BAC98017.1| mKIAA0756 protein [Mus musculus]
          Length = 1251

 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 136/390 (34%), Positives = 197/390 (50%), Gaps = 9/390 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PS++    N+ K+L I +V   D
Sbjct: 340 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSNKAKFENFNKALRITNVSEED 398

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 399 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 457

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 458 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 517

Query: 219 PEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKIT 275
           P +  A      V       L C  FG+P P + W  N +   L GG Y + E G L+I 
Sbjct: 518 PRMLSARNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIK 577

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
            +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    DP
Sbjct: 578 MIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHDP 637

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
           SLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A 
Sbjct: 638 SLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKAY 694

Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           LTV    + P +  L  + + +   ++W P
Sbjct: 695 LTVLGRPDRPRDLELTDLAE-RSVRLTWIP 723



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 152/656 (23%), Positives = 256/656 (39%), Gaps = 72/656 (10%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 255 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 313

Query: 113 AKSYSIDLSVLAA-----PYFTVEPEFINAAEE----ETVTFECKASGLPEPEIHWVHNG 163
              +++ +          P F + P+  ++++       +  EC ASG+P P+I W   G
Sbjct: 314 KNPFTLKVLTTRGVAERTPSF-MYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKG 372

Query: 164 KPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
             +   P N  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP   
Sbjct: 373 GDL---PSNKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYWL 428

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDV 277
           + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D 
Sbjct: 429 DEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRDT 486

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKE--HTHITDQPEDYEVEAGQSATFRCNAVSDP 335
             +    Y C   N+ G    +  ++V +     ++ + +   V         C     P
Sbjct: 487 QISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSARNQLIRVILYNRTRLDCPFFGSP 546

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
              L   W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  
Sbjct: 547 IPTLR--WFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVR 603

Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIRE 454
           L V+ P       T I  +   +       V  +    H    K+  +W + D    I  
Sbjct: 604 LEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 656

Query: 455 LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII------SFVTPEGVPGTVQ 508
            +  + +S T            F       G+Y    S  +      +++T  G P   +
Sbjct: 657 RMKKEDDSLTI-----------FGVAERDQGSYTCMASTELDQDLAKAYLTVLGRPDRPR 705

Query: 509 SLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
            LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   +   P + ++ 
Sbjct: 706 DLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSRF---PGSVNSA 761

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISW 622
           +  L P   Y+  +    + G    S      +     P  NP +V+G G+  NN+ I+W
Sbjct: 762 VLHLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITW 821

Query: 623 TAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           T M       P+ +Y + WRR  T E WN  +V  W  S  V+   P + PYEI+V
Sbjct: 822 TPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQTPVYVPYEIRV 874



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     T+        P  AP+    I+V+++    + WN V   +++
Sbjct: 870  YEIRVQAENDFGKGPEPDTIIGYSGEDYPRAAPTEVK-IRVLNSTAISLQWNRVYSDTVQ 928

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 929  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVARLFPYSNYKLEMVVVNGRG 988

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY ++Y    GT
Sbjct: 989  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYILRYVPFNGT 1048

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 1049 KLGKQMVENF----SPNQTKFSVQRADPVSRYRFSLSARTQVGSG 1089



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 119/296 (40%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 145 DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 204

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 205 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 264

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T 
Sbjct: 265 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 324

Query: 310 --ITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             + ++   +    G S++            C A   P+    I W +     D  S   
Sbjct: 325 RGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSNKA 380

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 381 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 436



 Score = 46.2 bits (108), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 29/206 (14%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 125 LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 184

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 185 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 239

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 240 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 295

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQV 400
              Y+C A+      I+ +   T++V
Sbjct: 296 QTDYSCNARFHFTHTIQQKNPFTLKV 321


>gi|402864553|ref|XP_003896524.1| PREDICTED: neuronal cell adhesion molecule isoform 1 [Papio anubis]
          Length = 1180

 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 146/421 (34%), Positives = 210/421 (49%), Gaps = 28/421 (6%)

Query: 24  ISASQNRHAPK-----QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPS 77
           ISA  +R  P      +   + K+E  LR   + L CI  G P P   W+K DG  + P 
Sbjct: 239 ISAKSSRERPPTFLTPEGNASNKEE--LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPK 294

Query: 78  DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINA 137
           +R    N+ K+L I HV  +D G+Y C   N +G A  ++I + V AAPY+   P+ +  
Sbjct: 295 NRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALG-AIHHTISVRVKAAPYWITAPQNLVL 353

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  E  T  C+A+G P+P I W+ NG PI  AP +P RK+  + I   N+++  +  Y C
Sbjct: 354 SPGEDGTLICRANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQC 413

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQ 256
           NA+N  GY+  + +VNVLA  P I       Y V   +  +L C  FG+P P + W    
Sbjct: 414 NASNEYGYLLANAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGA 473

Query: 257 K--ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
           K   L    Y + E G L+I       +G YTC ARNKLG A+    L +K+ T I  QP
Sbjct: 474 KGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTWIIKQP 533

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           E   V+ G   +F C    D +L L+++WL+ +   +  S+ RF    D+ L +   S+ 
Sbjct: 534 EYAVVQRGSMVSFECKVKHDYTLTLTVLWLKDNR--ELPSDERFTVDKDH-LVIADVSDN 590

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPS----------NFTLIQVIDAKKAVVSWN 424
           DSG YTC A T LD + A A L+V  P   P+          +  L   +D K   +SW 
Sbjct: 591 DSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWT 649

Query: 425 P 425
           P
Sbjct: 650 P 650



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 163/643 (25%), Positives = 267/643 (41%), Gaps = 72/643 (11%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTC--EVSNGVGEAKSYSIDLSVLAA------PYF 128
           S+R+SQG  G       +    +  Y C    ++     +   I + V++A      P  
Sbjct: 191 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISAKSSRERPPT 250

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---R 181
            + PE   + +EE     ++ EC A GLP P I+W    K     P N  R V  N    
Sbjct: 251 FLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKT 305

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR 241
           + I ++ ++D+GNY C A N+LG ++  + V V A AP    AP++     G+   L CR
Sbjct: 306 LQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICR 364

Query: 242 VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQG 298
             G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    
Sbjct: 365 ANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLA 424

Query: 299 SGSLTVKEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           +  + V         P +  Y+V A + A   C     P    +I W +G++      E 
Sbjct: 425 NAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-ED 481

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQV 413
            +V   + +L +  + +  +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q 
Sbjct: 482 IYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTWIIKQPE-YAVVQ- 539

Query: 414 IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPA 473
              + ++VS+       ++  +       W + +     REL  +  E  T + D  V A
Sbjct: 540 ---RGSMVSFE----CKVKHDYTLTLTVLWLKDN-----RELPSD--ERFTVDKDHLVIA 585

Query: 474 SKNFARVLAFNGAYNG-----PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFY 521
             +      +    N        S ++S V P   P  V  +   P           +  
Sbjct: 586 DVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQ 645

Query: 522 LKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIH 581
           L W   +  N  +  + I+Y+    T   P L         T T+A+L  L P   Y   
Sbjct: 646 LSWTPGDDNNSPITKFIIEYED---TMHEPGLWHHQTEVSGTQTTAQLK-LSPYVNYSFR 701

Query: 582 LAGYTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHF 635
           +      G      A  +YL     P KNP  VEG GS P+NLVI+W  +   E N P  
Sbjct: 702 VMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGL 761

Query: 636 KYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           +Y++ WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 762 QYKVSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 802



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 825  LPMVAPGNVR-VNVVNSTLAEVRWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 883

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 884  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 943

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 944  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 999

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1000 NFSTRYKFYFYAQTSAGSGSQ 1020



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 138/605 (22%), Positives = 226/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 361 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 416

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 417 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 474

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 475 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIIKQ 532

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L I DV+  DS
Sbjct: 533 PEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKDNRELPSDERFTVDKDHLVIADVSDNDS 592

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 593 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 647

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 648 WTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 707

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 708 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 766

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 767 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAVVMGHSGE 823

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   ++W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 824 DLPMVAPGNVRVNVVNSTLAEVRWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 883

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 884 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 936

Query: 616 NNLVI 620
           ++L I
Sbjct: 937 SSLKI 941



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 122/301 (40%), Gaps = 40/301 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 --EHTHITDQPEDYEVEAGQSAT---FRCNAVSDPSLKLS-----IVWLR--GSEPIDFE 353
                   ++P  +    G ++     R N +S   +        I W +  G  P +  
Sbjct: 238 VISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKN-- 295

Query: 354 SEPRFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFT 409
              R V  N + +L +   SE DSG Y C A+  L  I    ++ V+     + AP N  
Sbjct: 296 ---RTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLV 352

Query: 410 L 410
           L
Sbjct: 353 L 353


>gi|402864557|ref|XP_003896526.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Papio anubis]
          Length = 1192

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 146/421 (34%), Positives = 210/421 (49%), Gaps = 28/421 (6%)

Query: 24  ISASQNRHAPK-----QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPS 77
           ISA  +R  P      +   + K+E  LR   + L CI  G P P   W+K DG  + P 
Sbjct: 239 ISAKSSRERPPTFLTPEGNASNKEE--LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPK 294

Query: 78  DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINA 137
           +R    N+ K+L I HV  +D G+Y C   N +G A  ++I + V AAPY+   P+ +  
Sbjct: 295 NRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALG-AIHHTISVRVKAAPYWITAPQNLVL 353

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  E  T  C+A+G P+P I W+ NG PI  AP +P RK+  + I   N+++  +  Y C
Sbjct: 354 SPGEDGTLICRANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQC 413

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQ 256
           NA+N  GY+  + +VNVLA  P I       Y V   +  +L C  FG+P P + W    
Sbjct: 414 NASNEYGYLLANAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGA 473

Query: 257 K--ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
           K   L    Y + E G L+I       +G YTC ARNKLG A+    L +K+ T I  QP
Sbjct: 474 KGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTWIIKQP 533

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           E   V+ G   +F C    D +L L+++WL+ +   +  S+ RF    D+ L +   S+ 
Sbjct: 534 EYAVVQRGSMVSFECKVKHDYTLTLTVLWLKDNR--ELPSDERFTVDKDH-LVIADVSDN 590

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPS----------NFTLIQVIDAKKAVVSWN 424
           DSG YTC A T LD + A A L+V  P   P+          +  L   +D K   +SW 
Sbjct: 591 DSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWT 649

Query: 425 P 425
           P
Sbjct: 650 P 650



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 163/643 (25%), Positives = 267/643 (41%), Gaps = 72/643 (11%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTC--EVSNGVGEAKSYSIDLSVLAA------PYF 128
           S+R+SQG  G       +    +  Y C    ++     +   I + V++A      P  
Sbjct: 191 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISAKSSRERPPT 250

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---R 181
            + PE   + +EE     ++ EC A GLP P I+W    K     P N  R V  N    
Sbjct: 251 FLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKT 305

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR 241
           + I ++ ++D+GNY C A N+LG ++  + V V A AP    AP++     G+   L CR
Sbjct: 306 LQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICR 364

Query: 242 VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQG 298
             G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    
Sbjct: 365 ANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLA 424

Query: 299 SGSLTVKEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           +  + V         P +  Y+V A + A   C     P    +I W +G++      E 
Sbjct: 425 NAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-ED 481

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQV 413
            +V   + +L +  + +  +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q 
Sbjct: 482 IYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTWIIKQPE-YAVVQ- 539

Query: 414 IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPA 473
              + ++VS+       ++  +       W + +     REL  +  E  T + D  V A
Sbjct: 540 ---RGSMVSFE----CKVKHDYTLTLTVLWLKDN-----RELPSD--ERFTVDKDHLVIA 585

Query: 474 SKNFARVLAFNGAYNG-----PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFY 521
             +      +    N        S ++S V P   P  V  +   P           +  
Sbjct: 586 DVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQ 645

Query: 522 LKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIH 581
           L W   +  N  +  + I+Y+    T   P L         T T+A+L  L P   Y   
Sbjct: 646 LSWTPGDDNNSPITKFIIEYED---TMHEPGLWHHQTEVSGTQTTAQLK-LSPYVNYSFR 701

Query: 582 LAGYTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHF 635
           +      G      A  +YL     P KNP  VEG GS P+NLVI+W  +   E N P  
Sbjct: 702 VMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGL 761

Query: 636 KYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           +Y++ WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 762 QYKVSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 802



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 825  LPMVAPGNVR-VNVVNSTLAEVRWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 883

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 884  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 943

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 944  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 999

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1000 NFSTRYKFYFYAQTSAGSGSQ 1020



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 138/605 (22%), Positives = 226/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 361 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 416

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 417 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 474

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 475 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIIKQ 532

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L I DV+  DS
Sbjct: 533 PEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKDNRELPSDERFTVDKDHLVIADVSDNDS 592

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 593 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 647

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 648 WTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 707

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 708 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 766

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 767 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAVVMGHSGE 823

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   ++W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 824 DLPMVAPGNVRVNVVNSTLAEVRWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 883

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 884 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 936

Query: 616 NNLVI 620
           ++L I
Sbjct: 937 SSLKI 941



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 122/301 (40%), Gaps = 40/301 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 --EHTHITDQPEDYEVEAGQSAT---FRCNAVSDPSLKLS-----IVWLR--GSEPIDFE 353
                   ++P  +    G ++     R N +S   +        I W +  G  P +  
Sbjct: 238 VISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKN-- 295

Query: 354 SEPRFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFT 409
              R V  N + +L +   SE DSG Y C A+  L  I    ++ V+     + AP N  
Sbjct: 296 ---RTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLV 352

Query: 410 L 410
           L
Sbjct: 353 L 353


>gi|297289128|ref|XP_002803474.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Macaca
           mulatta]
 gi|387539344|gb|AFJ70299.1| neuronal cell adhesion molecule isoform A precursor [Macaca
           mulatta]
          Length = 1304

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 139/394 (35%), Positives = 199/394 (50%), Gaps = 21/394 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  + P +R    N+ K+L I HV  +D G+Y C
Sbjct: 283 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIIHVSEADSGNYQC 340

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+   P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 341 IAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 399

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 400 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 459

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 460 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 519

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 520 TGTYTCVARNKLGMAKNEVHLEIKDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTV 579

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  S+ RF    D+ L +   S+ DSG YTC A T LD + A A L+V  P
Sbjct: 580 LWLKDNR--ELPSDERFTVDKDH-LVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAP 636

Query: 402 LEAPS----------NFTLIQVIDAKKAVVSWNP 425
              P+          +  L   +D K   +SW P
Sbjct: 637 TPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWTP 669



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 147/565 (26%), Positives = 238/565 (42%), Gaps = 60/565 (10%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W    K     P N  R V  N    + I ++ ++D+GNY C A
Sbjct: 288 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 342

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK-- 257
            N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 343 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 401

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N+ G    +  + V         P +
Sbjct: 402 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPAN 461

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + + 
Sbjct: 462 TLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKD 518

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
            +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q    + ++VS+       +
Sbjct: 519 STGTYTCVARNKLGMAKNEVHLEIKDPTWIIKQPE-YAVVQ----RGSMVSFE----CKV 569

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG-- 489
           +  +       W + +     REL  +  E  T + D  V A  +      +    N   
Sbjct: 570 KHDYTLTLTVLWLKDN-----RELPSD--ERFTVDKDHLVIADVSDNDSGTYTCVANTTL 622

Query: 490 ---PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKI 539
                S ++S V P   P  V  +   P           +  L W   +  N  +  + I
Sbjct: 623 DSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFII 682

Query: 540 KYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESK 595
           +Y+    T   P L         T T+A+L  L P   Y   +      G      A  +
Sbjct: 683 EYED---TMHEPGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNSIGKSLPSEASEQ 738

Query: 596 YLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQD 653
           YL     P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W   
Sbjct: 739 YLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS- 797

Query: 654 DVLDWRQSELVLANQPTFQPYEIKV 678
            V+    S+ +++  PTF PY IKV
Sbjct: 798 -VVVANVSKYIVSGTPTFVPYLIKV 821



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 844  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 902

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 903  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 962

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 963  PTLDSLTLEWHPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIP----ANKTRWTLKNL 1018

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1019 NFSTRYKFYFYAQTSAGSGSQ 1039



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 138/605 (22%), Positives = 225/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 380 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 436 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 493

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 494 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIIKQ 551

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L I DV+  DS
Sbjct: 552 PEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKDNRELPSDERFTVDKDHLVIADVSDNDS 611

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 612 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 666

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 667 WTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 726

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 727 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 785

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 786 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAVVMGHSGE 842

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 843 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 902

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 903 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 955

Query: 616 NNLVI 620
           ++L I
Sbjct: 956 SSLKI 960



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 126/315 (40%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 E------HTHITDQPEDYEVEAGQSATFR--------CNAVSDPSLKLSIVWLRG----- 346
                  +  I     D E    +S+  R         NA +   L+ +++ L       
Sbjct: 238 VISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGL 297

Query: 347 SEPIDFESEP-------RFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             PI + ++        R V  N + +L +   SE DSG Y C A+  L  I    ++ V
Sbjct: 298 PTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRV 357

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 358 KAAPYWITAPQNLVL 372


>gi|402864561|ref|XP_003896528.1| PREDICTED: neuronal cell adhesion molecule isoform 5 [Papio anubis]
          Length = 1304

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 139/394 (35%), Positives = 199/394 (50%), Gaps = 21/394 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  + P +R    N+ K+L I HV  +D G+Y C
Sbjct: 283 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIIHVSEADSGNYQC 340

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+   P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 341 IAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 399

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 400 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 459

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 460 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 519

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 520 TGTYTCVARNKLGMAKNEVHLEIKDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTV 579

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  S+ RF    D+ L +   S+ DSG YTC A T LD + A A L+V  P
Sbjct: 580 LWLKDNR--ELPSDERFTVDKDH-LVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAP 636

Query: 402 LEAPS----------NFTLIQVIDAKKAVVSWNP 425
              P+          +  L   +D K   +SW P
Sbjct: 637 TPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWTP 669



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 147/565 (26%), Positives = 238/565 (42%), Gaps = 60/565 (10%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W    K     P N  R V  N    + I ++ ++D+GNY C A
Sbjct: 288 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 342

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK-- 257
            N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 343 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 401

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N+ G    +  + V         P +
Sbjct: 402 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPAN 461

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + + 
Sbjct: 462 TLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKD 518

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
            +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q    + ++VS+       +
Sbjct: 519 STGTYTCVARNKLGMAKNEVHLEIKDPTWIIKQPE-YAVVQ----RGSMVSFE----CKV 569

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG-- 489
           +  +       W + +     REL  +  E  T + D  V A  +      +    N   
Sbjct: 570 KHDYTLTLTVLWLKDN-----RELPSD--ERFTVDKDHLVIADVSDNDSGTYTCVANTTL 622

Query: 490 ---PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKI 539
                S ++S V P   P  V  +   P           +  L W   +  N  +  + I
Sbjct: 623 DSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFII 682

Query: 540 KYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESK 595
           +Y+    T   P L         T T+A+L  L P   Y   +      G      A  +
Sbjct: 683 EYED---TMHEPGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNSIGKSLPSEASEQ 738

Query: 596 YLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQD 653
           YL     P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W   
Sbjct: 739 YLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS- 797

Query: 654 DVLDWRQSELVLANQPTFQPYEIKV 678
            V+    S+ +++  PTF PY IKV
Sbjct: 798 -VVVANVSKYIVSGTPTFVPYLIKV 821



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 844  LPMVAPGNVR-VNVVNSTLAEVRWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 902

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 903  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 962

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 963  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIP----ANKTRWTLKNL 1018

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1019 NFSTRYKFYFYAQTSAGSGSQ 1039



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 138/605 (22%), Positives = 226/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 380 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 436 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 493

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 494 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIIKQ 551

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L I DV+  DS
Sbjct: 552 PEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKDNRELPSDERFTVDKDHLVIADVSDNDS 611

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 612 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 666

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 667 WTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 726

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 727 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 785

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 786 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAVVMGHSGE 842

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   ++W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 843 DLPMVAPGNVRVNVVNSTLAEVRWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 902

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 903 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 955

Query: 616 NNLVI 620
           ++L I
Sbjct: 956 SSLKI 960



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 126/315 (40%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 E------HTHITDQPEDYEVEAGQSATFR--------CNAVSDPSLKLSIVWLRG----- 346
                  +  I     D E    +S+  R         NA +   L+ +++ L       
Sbjct: 238 VISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGL 297

Query: 347 SEPIDFESEP-------RFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             PI + ++        R V  N + +L +   SE DSG Y C A+  L  I    ++ V
Sbjct: 298 PTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRV 357

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 358 KAAPYWITAPQNLVL 372


>gi|387539342|gb|AFJ70298.1| neuronal cell adhesion molecule isoform E precursor [Macaca
           mulatta]
          Length = 1192

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 146/421 (34%), Positives = 210/421 (49%), Gaps = 28/421 (6%)

Query: 24  ISASQNRHAPK-----QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPS 77
           ISA  +R  P      +   + K+E  LR   + L CI  G P P   W+K DG  + P 
Sbjct: 239 ISAKSSRERPPTFLTPEGNASNKEE--LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPK 294

Query: 78  DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINA 137
           +R    N+ K+L I HV  +D G+Y C   N +G A  ++I + V AAPY+   P+ +  
Sbjct: 295 NRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALG-AIHHTISVRVKAAPYWITAPQNLVL 353

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  E  T  C+A+G P+P I W+ NG PI  AP +P RK+  + I   N+++  +  Y C
Sbjct: 354 SPGEDGTLICRANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQC 413

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQ 256
           NA+N  GY+  + +VNVLA  P I       Y V   +  +L C  FG+P P + W    
Sbjct: 414 NASNEYGYLLANAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGA 473

Query: 257 K--ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
           K   L    Y + E G L+I       +G YTC ARNKLG A+    L +K+ T I  QP
Sbjct: 474 KGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTWIIKQP 533

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           E   V+ G   +F C    D +L L+++WL+ +   +  S+ RF    D+ L +   S+ 
Sbjct: 534 EYAVVQRGSMVSFECKVKHDYTLTLTVLWLKDNR--ELPSDERFTVDKDH-LVIADVSDN 590

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPS----------NFTLIQVIDAKKAVVSWN 424
           DSG YTC A T LD + A A L+V  P   P+          +  L   +D K   +SW 
Sbjct: 591 DSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWT 649

Query: 425 P 425
           P
Sbjct: 650 P 650



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 163/643 (25%), Positives = 267/643 (41%), Gaps = 72/643 (11%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTC--EVSNGVGEAKSYSIDLSVLAA------PYF 128
           S+R+SQG  G       +    +  Y C    ++     +   I + V++A      P  
Sbjct: 191 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISAKSSRERPPT 250

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---R 181
            + PE   + +EE     ++ EC A GLP P I+W    K     P N  R V  N    
Sbjct: 251 FLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKT 305

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR 241
           + I ++ ++D+GNY C A N+LG ++  + V V A AP    AP++     G+   L CR
Sbjct: 306 LQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICR 364

Query: 242 VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQG 298
             G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    
Sbjct: 365 ANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLA 424

Query: 299 SGSLTVKEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           +  + V         P +  Y+V A + A   C     P    +I W +G++      E 
Sbjct: 425 NAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-ED 481

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQV 413
            +V   + +L +  + +  +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q 
Sbjct: 482 IYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTWIIKQPE-YAVVQ- 539

Query: 414 IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPA 473
              + ++VS+       ++  +       W + +     REL  +  E  T + D  V A
Sbjct: 540 ---RGSMVSFE----CKVKHDYTLTLTVLWLKDN-----RELPSD--ERFTVDKDHLVIA 585

Query: 474 SKNFARVLAFNGAYNG-----PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFY 521
             +      +    N        S ++S V P   P  V  +   P           +  
Sbjct: 586 DVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQ 645

Query: 522 LKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIH 581
           L W   +  N  +  + I+Y+    T   P L         T T+A+L  L P   Y   
Sbjct: 646 LSWTPGDDNNSPITKFIIEYED---TMHEPGLWHHQTEVSGTQTTAQLK-LSPYVNYSFR 701

Query: 582 LAGYTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHF 635
           +      G      A  +YL     P KNP  VEG GS P+NLVI+W  +   E N P  
Sbjct: 702 VMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGL 761

Query: 636 KYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           +Y++ WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 762 QYKVSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 802



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 825  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 883

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 884  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 943

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 944  PTLDSLTLEWHPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 999

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1000 NFSTRYKFYFYAQTSAGSGSQ 1020



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 138/605 (22%), Positives = 225/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 361 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 416

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 417 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 474

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 475 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIIKQ 532

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L I DV+  DS
Sbjct: 533 PEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKDNRELPSDERFTVDKDHLVIADVSDNDS 592

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 593 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 647

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 648 WTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 707

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 708 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 766

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 767 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAVVMGHSGE 823

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 824 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 883

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 884 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 936

Query: 616 NNLVI 620
           ++L I
Sbjct: 937 SSLKI 941



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 122/301 (40%), Gaps = 40/301 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 --EHTHITDQPEDYEVEAGQSAT---FRCNAVSDPSLKLS-----IVWLR--GSEPIDFE 353
                   ++P  +    G ++     R N +S   +        I W +  G  P +  
Sbjct: 238 VISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKN-- 295

Query: 354 SEPRFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFT 409
              R V  N + +L +   SE DSG Y C A+  L  I    ++ V+     + AP N  
Sbjct: 296 ---RTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLV 352

Query: 410 L 410
           L
Sbjct: 353 L 353


>gi|380798909|gb|AFE71330.1| neuronal cell adhesion molecule isoform E precursor, partial
           [Macaca mulatta]
          Length = 1166

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 146/421 (34%), Positives = 210/421 (49%), Gaps = 28/421 (6%)

Query: 24  ISASQNRHAPK-----QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPS 77
           ISA  +R  P      +   + K+E  LR   + L CI  G P P   W+K DG  + P 
Sbjct: 213 ISAKSSRERPPTFLTPEGNASNKEE--LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPK 268

Query: 78  DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINA 137
           +R    N+ K+L I HV  +D G+Y C   N +G A  ++I + V AAPY+   P+ +  
Sbjct: 269 NRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALG-AIHHTISVRVKAAPYWITAPQNLVL 327

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  E  T  C+A+G P+P I W+ NG PI  AP +P RK+  + I   N+++  +  Y C
Sbjct: 328 SPGEDGTLICRANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQC 387

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQ 256
           NA+N  GY+  + +VNVLA  P I       Y V   +  +L C  FG+P P + W    
Sbjct: 388 NASNEYGYLLANAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGA 447

Query: 257 K--ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
           K   L    Y + E G L+I       +G YTC ARNKLG A+    L +K+ T I  QP
Sbjct: 448 KGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTWIIKQP 507

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           E   V+ G   +F C    D +L L+++WL+ +   +  S+ RF    D+ L +   S+ 
Sbjct: 508 EYAVVQRGSMVSFECKVKHDYTLTLTVLWLKDNR--ELPSDERFTVDKDH-LVIADVSDN 564

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPS----------NFTLIQVIDAKKAVVSWN 424
           DSG YTC A T LD + A A L+V  P   P+          +  L   +D K   +SW 
Sbjct: 565 DSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWT 623

Query: 425 P 425
           P
Sbjct: 624 P 624



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 163/643 (25%), Positives = 267/643 (41%), Gaps = 72/643 (11%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTC--EVSNGVGEAKSYSIDLSVLAA------PYF 128
           S+R+SQG  G       +    +  Y C    ++     +   I + V++A      P  
Sbjct: 165 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISAKSSRERPPT 224

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---R 181
            + PE   + +EE     ++ EC A GLP P I+W    K     P N  R V  N    
Sbjct: 225 FLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKT 279

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR 241
           + I ++ ++D+GNY C A N+LG ++  + V V A AP    AP++     G+   L CR
Sbjct: 280 LQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICR 338

Query: 242 VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQG 298
             G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    
Sbjct: 339 ANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLA 398

Query: 299 SGSLTVKEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           +  + V         P +  Y+V A + A   C     P    +I W +G++      E 
Sbjct: 399 NAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-ED 455

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQV 413
            +V   + +L +  + +  +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q 
Sbjct: 456 IYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTWIIKQPE-YAVVQ- 513

Query: 414 IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPA 473
              + ++VS+       ++  +       W + +     REL  +  E  T + D  V A
Sbjct: 514 ---RGSMVSFE----CKVKHDYTLTLTVLWLKDN-----RELPSD--ERFTVDKDHLVIA 559

Query: 474 SKNFARVLAFNGAYNG-----PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFY 521
             +      +    N        S ++S V P   P  V  +   P           +  
Sbjct: 560 DVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQ 619

Query: 522 LKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIH 581
           L W   +  N  +  + I+Y+    T   P L         T T+A+L  L P   Y   
Sbjct: 620 LSWTPGDDNNSPITKFIIEYED---TMHEPGLWHHQTEVSGTQTTAQLK-LSPYVNYSFR 675

Query: 582 LAGYTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHF 635
           +      G      A  +YL     P KNP  VEG GS P+NLVI+W  +   E N P  
Sbjct: 676 VMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGL 735

Query: 636 KYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           +Y++ WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 736 QYKVSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 776



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
           +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 799 LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 857

Query: 460 -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 858 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 917

Query: 515 LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
               +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 918 PTLDSLTLEWHPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 973

Query: 573 EPSTKYRIHLAGYTKAGDGAE 593
             ST+Y+ +    T AG G++
Sbjct: 974 NFSTRYKFYFYAQTSAGSGSQ 994



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 138/605 (22%), Positives = 225/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 335 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 390

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 391 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 448

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 449 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIIKQ 506

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L I DV+  DS
Sbjct: 507 PEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKDNRELPSDERFTVDKDHLVIADVSDNDS 566

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 567 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 621

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 622 WTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 681

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 682 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 740

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 741 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAVVMGHSGE 797

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 798 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 857

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 858 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 910

Query: 616 NNLVI 620
           ++L I
Sbjct: 911 SSLKI 915



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 122/301 (40%), Gaps = 40/301 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 36  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 91

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 92  EGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 151

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 152 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 211

Query: 306 --EHTHITDQPEDYEVEAGQSAT---FRCNAVSDPSLKLS-----IVWLR--GSEPIDFE 353
                   ++P  +    G ++     R N +S   +        I W +  G  P +  
Sbjct: 212 VISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKN-- 269

Query: 354 SEPRFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFT 409
              R V  N + +L +   SE DSG Y C A+  L  I    ++ V+     + AP N  
Sbjct: 270 ---RTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLV 326

Query: 410 L 410
           L
Sbjct: 327 L 327


>gi|148707723|gb|EDL39670.1| neurofascin, isoform CRA_b [Mus musculus]
          Length = 972

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 134/372 (36%), Positives = 189/372 (50%), Gaps = 8/372 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PS++    N+ K+L I +V   D
Sbjct: 319 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSNKAKFENFNKALRITNVSEED 377

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 378 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 436

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 437 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 496

Query: 219 PEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKIT 275
           P +  A      V       L C  FG+P P + W  N +   L GG Y + E G L+I 
Sbjct: 497 PRMLSARNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIK 556

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
            +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    DP
Sbjct: 557 MIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHDP 616

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
           SLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A 
Sbjct: 617 SLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKAY 673

Query: 396 LTVQVPLEAPSN 407
           LTV      P+N
Sbjct: 674 LTVLADQATPTN 685



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 156/667 (23%), Positives = 264/667 (39%), Gaps = 79/667 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 234 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 292

Query: 113 AKSYSIDLSVLAA-----PYFTVEPEFINAAEE----ETVTFECKASGLPEPEIHWVHNG 163
              +++ +          P F + P+  ++++       +  EC ASG+P P+I W   G
Sbjct: 293 KNPFTLKVLTTRGVAERTPSF-MYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKG 351

Query: 164 KPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
             +   P N  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP   
Sbjct: 352 GDL---PSNKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYWL 407

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDV 277
           + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D 
Sbjct: 408 DEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRDT 465

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKE--HTHITDQPEDYEVEAGQSATFRCNAVSDP 335
             +    Y C   N+ G    +  ++V +     ++ + +   V         C     P
Sbjct: 466 QISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSARNQLIRVILYNRTRLDCPFFGSP 525

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
              L   W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  
Sbjct: 526 IPTLR--WFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVR 582

Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIRE 454
           L V+ P       T I  +   +       V  +    H    K+  +W + D    I  
Sbjct: 583 LEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 635

Query: 455 LIVNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
            +  + +S T                 TE+D+ +  +K +  VLA       P + + + 
Sbjct: 636 RMKKEDDSLTIFGVAERDQGSYTCMASTELDQDL--AKAYLTVLADQAT---PTNRLAAL 690

Query: 498 VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLP 557
             P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   
Sbjct: 691 --PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSR 747

Query: 558 YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGR 611
           +   P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G 
Sbjct: 748 F---PGSVNSAVLHLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGE 804

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
           G+  NN+ I+WT M       P+ +Y + WRR  T E WN  +V  W  S  V+   P +
Sbjct: 805 GTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQTPVY 861

Query: 672 QPYEIKV 678
            PYEI+V
Sbjct: 862 VPYEIRV 868



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 119/297 (40%), Gaps = 30/297 (10%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGN 194
            + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G 
Sbjct: 123 RDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGE 182

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNW 252
           Y C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W
Sbjct: 183 YQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFW 242

Query: 253 IHNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHT 308
           + +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T
Sbjct: 243 MSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLT 302

Query: 309 H--ITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
              + ++   +    G S++            C A   P+    I W +     D  S  
Sbjct: 303 TRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSNK 358

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
              ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 359 AKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 415



 Score = 45.8 bits (107), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 29/206 (14%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 104 LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 163

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 164 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 218

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 219 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 274

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQV 400
              Y+C A+      I+ +   T++V
Sbjct: 275 QTDYSCNARFHFTHTIQQKNPFTLKV 300


>gi|237858630|ref|NP_001153788.1| neurofascin isoform 2 precursor [Mus musculus]
          Length = 1189

 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 134/372 (36%), Positives = 189/372 (50%), Gaps = 8/372 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PS++    N+ K+L I +V   D
Sbjct: 263 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSNKAKFENFNKALRITNVSEED 321

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 322 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 380

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 381 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 440

Query: 219 PEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKIT 275
           P +  A      V       L C  FG+P P + W  N +   L GG Y + E G L+I 
Sbjct: 441 PRMLSARNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIK 500

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
            +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    DP
Sbjct: 501 MIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHDP 560

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
           SLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A 
Sbjct: 561 SLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKAY 617

Query: 396 LTVQVPLEAPSN 407
           LTV      P+N
Sbjct: 618 LTVLADQATPTN 629



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 160/684 (23%), Positives = 265/684 (38%), Gaps = 96/684 (14%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 220 KNPFTLKV-LTNNPYNDSSLRNHPDIYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLE 278

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P N  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 279 CIASGVPTPDIAWYKKGGDL---PSNKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 335

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 336 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 394

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE--HTHITDQPEDYE 318
             R    +T  +   D   +    Y C   N+ G    +  ++V +     ++ + +   
Sbjct: 395 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSARNQLIR 452

Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQ 378
           V         C     P   L   W +  +  + +     V  N  SL +    + D G 
Sbjct: 453 VILYNRTRLDCPFFGSPIPTLR--WFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGI 509

Query: 379 YTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGY 438
           YTC A   L   E Q  L V+ P       T I  +   +       V  +    H    
Sbjct: 510 YTCVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSL 562

Query: 439 KVQ-TWTEKDGEGSIRELIVNKGESTT-----------------TEVDKFVPASKNFARV 480
           K+  +W + D    I   +  + +S T                 TE+D+ +  +K +  V
Sbjct: 563 KLTVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQDL--AKAYLTV 620

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
           LA       P + + +   P+G P   + LE   L   +  L W+  +  N  +  Y ++
Sbjct: 621 LADQAT---PTNRLAAL--PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQ 675

Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------ 594
           ++  +  + G   +   +   P + ++ +  L P   Y+  +    + G    S      
Sbjct: 676 FEEDQ-FQPGVWHDHSRF---PGSVNSAVLHLSPYVNYQFRVIAVNEVGSSHPSLPSERY 731

Query: 595 KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
           +     P  NP +V+G G+  NN+ I+WT M       P+ +Y + WRR  T E WN  +
Sbjct: 732 RTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--N 789

Query: 655 VLDWRQSELVLANQPTFQPYEIKV 678
           V  W  S  V+   P + PYEI+V
Sbjct: 790 VTVW-GSRYVVGQTPVYVPYEIRV 812



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     T+        P  AP+    I+V+++    + WN V   +++
Sbjct: 808  YEIRVQAENDFGKGPEPDTIIGYSGEDYPRAAPTEVK-IRVLNSTAISLQWNRVYSDTVQ 866

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 867  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVARLFPYSNYKLEMVVVNGRG 926

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY ++Y    GT
Sbjct: 927  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYILRYVPFNGT 986

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 987  KLGKQMVENF----SPNQTKFSVQRADPVSRYRFSLSARTQVGSG 1027



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 119/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 230

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 231 NPYNDSSLRNHPDIYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PD 288

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S     ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 289 IAWYKKGG--DLPSNKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 346

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 347 APYWLDEPKNLIL 359



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 99/251 (39%), Gaps = 47/251 (18%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
              Y+C A+          T T+Q      + FTL         V++ NP +  SLR H 
Sbjct: 202 QTDYSCNARFHF-------THTIQ----QKNPFTL--------KVLTNNPYNDSSLRNHP 242

Query: 436 RGYKVQTWTEK 446
             Y  +   E+
Sbjct: 243 DIYSARGVAER 253


>gi|355747930|gb|EHH52427.1| hypothetical protein EGM_12865 [Macaca fascicularis]
          Length = 1310

 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 139/394 (35%), Positives = 199/394 (50%), Gaps = 21/394 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  + P +R    N+ K+L I HV  +D G+Y C
Sbjct: 283 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIIHVSEADSGNYQC 340

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+   P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 341 IAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 399

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 400 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 459

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 460 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 519

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 520 TGTYTCVARNKLGMAKNEVHLEIKDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTV 579

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  S+ RF    D+ L +   S+ DSG YTC A T LD + A A L+V  P
Sbjct: 580 LWLKDNR--ELPSDERFTVDKDH-LVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAP 636

Query: 402 LEAPS----------NFTLIQVIDAKKAVVSWNP 425
              P+          +  L   +D K   +SW P
Sbjct: 637 TPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWTP 669



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 147/565 (26%), Positives = 238/565 (42%), Gaps = 60/565 (10%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W    K     P N  R V  N    + I ++ ++D+GNY C A
Sbjct: 288 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 342

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK-- 257
            N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 343 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 401

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N+ G    +  + V         P +
Sbjct: 402 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPAN 461

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + + 
Sbjct: 462 TLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKD 518

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
            +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q    + ++VS+       +
Sbjct: 519 STGTYTCVARNKLGMAKNEVHLEIKDPTWIIKQPE-YAVVQ----RGSMVSFE----CKV 569

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG-- 489
           +  +       W + +     REL  +  E  T + D  V A  +      +    N   
Sbjct: 570 KHDYTLTLTVLWLKDN-----RELPSD--ERFTVDKDHLVIADVSDNDSGTYTCVANTTL 622

Query: 490 ---PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKI 539
                S ++S V P   P  V  +   P           +  L W   +  N  +  + I
Sbjct: 623 DSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFII 682

Query: 540 KYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESK 595
           +Y+    T   P L         T T+A+L  L P   Y   +      G      A  +
Sbjct: 683 EYED---TMHEPGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNSIGKSLPSEASEQ 738

Query: 596 YLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQD 653
           YL     P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W   
Sbjct: 739 YLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS- 797

Query: 654 DVLDWRQSELVLANQPTFQPYEIKV 678
            V+    S+ +++  PTF PY IKV
Sbjct: 798 -VVVANVSKYIVSGTPTFVPYLIKV 821



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 14/203 (6%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR------ 453
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY+   +  K    S R      
Sbjct: 844  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRASIYYWKTQSSSKRNRRHIE 902

Query: 454  -ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA 512
             +++  +G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ 
Sbjct: 903  KKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKI 962

Query: 513  IPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLA 570
            +     +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L 
Sbjct: 963  VNPTLDSLTLEWHPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIP----ANKTRWTLK 1018

Query: 571  GLEPSTKYRIHLAGYTKAGDGAE 593
             L  ST+Y+ +    T AG G++
Sbjct: 1019 NLNFSTRYKFYFYAQTSAGSGSQ 1041



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 126/315 (40%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 E------HTHITDQPEDYEVEAGQSATFR--------CNAVSDPSLKLSIVWLRG----- 346
                  +  I     D E    +S+  R         NA +   L+ +++ L       
Sbjct: 238 VISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGL 297

Query: 347 SEPIDFESEP-------RFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             PI + ++        R V  N + +L +   SE DSG Y C A+  L  I    ++ V
Sbjct: 298 PTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRV 357

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 358 KAAPYWITAPQNLVL 372



 Score = 41.6 bits (96), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWI 253
           + C   ++L          VL   P IT+    +Y +D +  +V+ C   G P P  +W 
Sbjct: 22  FLCQMISALEVPLDQKSTEVLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWT 81

Query: 254 HNQKELTGGRYTILE----TGDLKITDVAFADS----GEYTCFARNKLGTAQGSGSLTVK 305
            N       +  ++     TG L I  ++   +    G Y C ARN+ G A  +  +   
Sbjct: 82  RNGTHFDIDKDPLVTMKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAISNNIVVRP 141

Query: 306 EHTHI--TDQPEDYEVEAGQSATFRC 329
             + +   ++ E   +++GQS    C
Sbjct: 142 SRSPLWTKEKLEPITLQSGQSLVLPC 167


>gi|148707722|gb|EDL39669.1| neurofascin, isoform CRA_a [Mus musculus]
          Length = 1195

 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 134/372 (36%), Positives = 189/372 (50%), Gaps = 8/372 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PS++    N+ K+L I +V   D
Sbjct: 279 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSNKAKFENFNKALRITNVSEED 337

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 338 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 396

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 397 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 456

Query: 219 PEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKIT 275
           P +  A      V       L C  FG+P P + W  N +   L GG Y + E G L+I 
Sbjct: 457 PRMLSARNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIK 516

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
            +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    DP
Sbjct: 517 MIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHDP 576

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
           SLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A 
Sbjct: 577 SLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKAY 633

Query: 396 LTVQVPLEAPSN 407
           LTV      P+N
Sbjct: 634 LTVLADQATPTN 645



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 160/684 (23%), Positives = 265/684 (38%), Gaps = 96/684 (14%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 177 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 235

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 236 KNPFTLKV-LTNNPYNDSSLRNHPDIYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLE 294

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P N  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 295 CIASGVPTPDIAWYKKGGDL---PSNKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 351

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 352 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 410

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE--HTHITDQPEDYE 318
             R    +T  +   D   +    Y C   N+ G    +  ++V +     ++ + +   
Sbjct: 411 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSARNQLIR 468

Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQ 378
           V         C     P   L   W +  +  + +     V  N  SL +    + D G 
Sbjct: 469 VILYNRTRLDCPFFGSPIPTLR--WFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGI 525

Query: 379 YTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGY 438
           YTC A   L   E Q  L V+ P       T I  +   +       V  +    H    
Sbjct: 526 YTCVATNILGKAENQVRLEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSL 578

Query: 439 KVQ-TWTEKDGEGSIRELIVNKGESTT-----------------TEVDKFVPASKNFARV 480
           K+  +W + D    I   +  + +S T                 TE+D+ +  +K +  V
Sbjct: 579 KLTVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQDL--AKAYLTV 636

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
           LA       P + + +   P+G P   + LE   L   +  L W+  +  N  +  Y ++
Sbjct: 637 LADQAT---PTNRLAAL--PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQ 691

Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------ 594
           ++  +  + G   +   +   P + ++ +  L P   Y+  +    + G    S      
Sbjct: 692 FEEDQ-FQPGVWHDHSRF---PGSVNSAVLHLSPYVNYQFRVIAVNEVGSSHPSLPSERY 747

Query: 595 KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
           +     P  NP +V+G G+  NN+ I+WT M       P+ +Y + WRR  T E WN  +
Sbjct: 748 RTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--N 805

Query: 655 VLDWRQSELVLANQPTFQPYEIKV 678
           V  W  S  V+   P + PYEI+V
Sbjct: 806 VTVW-GSRYVVGQTPVYVPYEIRV 828



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     T+        P  AP+    I+V+++    + WN V   +++
Sbjct: 824  YEIRVQAENDFGKGPEPDTIIGYSGEDYPRAAPTEVK-IRVLNSTAISLQWNRVYSDTVQ 882

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 883  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVARLFPYSNYKLEMVVVNGRG 942

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY ++Y    GT
Sbjct: 943  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYILRYVPFNGT 1002

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 1003 KLGKQMVENF----SPNQTKFSVQRADPVSRYRFSLSARTQVGSG 1043



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 119/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 67  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 126

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 127 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 186

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 187 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 246

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 247 NPYNDSSLRNHPDIYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PD 304

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S     ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 305 IAWYKKGG--DLPSNKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 362

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 363 APYWLDEPKNLIL 375



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 99/251 (39%), Gaps = 47/251 (18%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 47  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 106

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 107 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 161

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 162 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 217

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
              Y+C A+          T T+Q      + FTL         V++ NP +  SLR H 
Sbjct: 218 QTDYSCNARFHF-------THTIQ----QKNPFTL--------KVLTNNPYNDSSLRNHP 258

Query: 436 RGYKVQTWTEK 446
             Y  +   E+
Sbjct: 259 DIYSARGVAER 269


>gi|344277020|ref|XP_003410303.1| PREDICTED: neurofascin-like isoform 4 [Loxodonta africana]
          Length = 1169

 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 135/391 (34%), Positives = 201/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PS +    N+ K+L I ++   D
Sbjct: 263 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSHKAKFENFNKALRITNISEED 321

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 322 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 380

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 381 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 440

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 441 PRML-SPRNQLMRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 499

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED  V+ G +    C    D
Sbjct: 500 KMIRKEDKGIYTCVATNILGKAENQVHLEVKDPTRIYQMPEDQVVKRGTTVQLPCRVKHD 559

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 560 PSLKLTVSWLKDDEPLYVGNR---MKKEDDSLTIFGVAERDQGSYTCIASTELDQDLAKA 616

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 617 HLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 646



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 153/671 (22%), Positives = 256/671 (38%), Gaps = 85/671 (12%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 220 KNPFTLKV-LTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLE 278

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 279 CIASGVPTPDIAWYKKGGDL---PSHKAKFENFNKALRITNISEEDSGEYFCLASNKMGS 335

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 336 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 394

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 395 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLMR 452

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 453 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDKGIYT 511

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   + V     V       H    K+
Sbjct: 512 CVATNILGKAENQVHLEVKDP-------TRIYQMPEDQVVKRGTTVQLPCRVKHDPSLKL 564

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII---- 495
             +W + D    +   +  + +S T            F       G+Y    S  +    
Sbjct: 565 TVSWLKDDEPLYVGNRMKKEDDSLTI-----------FGVAERDQGSYTCIASTELDQDL 613

Query: 496 --SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
             + +T  G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   
Sbjct: 614 AKAHLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWH 672

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDN 607
           +   +   P + ++ +  L P   Y+  +    + G    S      +     P  NP +
Sbjct: 673 DHSKF---PGSVNSAVLQLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAAPESNPAD 729

Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667
           V+G G+  NN+ I+WT M       P+ +Y + WRR  T + WN  +V  W  S  V+  
Sbjct: 730 VKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRDTWN--NVTVW-GSRYVVGQ 786

Query: 668 QPTFQPYEIKV 678
            P + PYEI+V
Sbjct: 787 TPVYVPYEIRV 797



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 102/225 (45%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP++   I+V+++    + WN V   +++
Sbjct: 793  YEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVK-IRVLNSTAISLQWNRVYSDTVQ 851

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+ T   V +  P S     ++  NG  
Sbjct: 852  GQLREYRAYYWRESSLLKNLWVSQKRQQASFLGDRTRGVVARLFPYSNYKLEMVVVNGRG 911

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY +KY +  GT
Sbjct: 912  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLQTINLEWDHPEHPNGILIGYTLKYVAFNGT 971

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            KVG  ++E       P  T   +   +P ++YR  L+  T+ G+G
Sbjct: 972  KVGKQIVENFA----PNQTKFTVPRADPVSRYRFTLSARTQVGNG 1012



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 117/313 (37%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPP---NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +  + A     + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGEPCPSFHWTRNSRFFNVAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 230

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 231 HPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PD 288

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S     ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 289 IAWYKKGG--DLPSHKAKFENFNKALRITNISEEDSGEYFCLASNKMGSIRHTISVRVKA 346

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 347 APYWLDEPKNLIL 359



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 29/213 (13%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L+  P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LSQPPTITKQSVKDHIVDPRDNILIECEAKGEPCPSFHWTRNSRFFNVAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQVPLEAPSN 407
              Y+C A+      I+ +   T++V    P N
Sbjct: 202 QTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN 234


>gi|410952030|ref|XP_003982692.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Felis catus]
          Length = 1181

 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 170/548 (31%), Positives = 250/548 (45%), Gaps = 39/548 (7%)

Query: 24  ISASQNRHAPKQQYV----TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR 79
           ISA  NR  P         T  KE  LR   + L CI  G P P   W K+   + P++R
Sbjct: 239 ISAKPNRERPPTFLTPEGNTSNKE-ELRGNVLSLECIAEGLPTPVIYWIKEDGTL-PTNR 296

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAE 139
               N+ K+L I  V  +D G+Y C   N +G A  ++I ++V AAPY+ + P+ +  + 
Sbjct: 297 TFYRNFKKTLQIIQVSEADSGNYQCIAKNALG-AIHHTISVTVKAAPYWILAPQNLVLSP 355

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA 199
            E  +  C+A+G P+P I W+ NG PI  AP +P RK+  + I   N+++  +  Y CNA
Sbjct: 356 GEDGSLICRANGNPKPRISWLSNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNA 415

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK- 257
           +N  GY+  + +VNVLA  P I  +    Y V   +  +L C  FG+P P + W    K 
Sbjct: 416 SNEYGYLLANAFVNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKG 475

Query: 258 -ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
             L    Y + E G L+I       +G YTC ARNKLG A+    L +K+ T I  QPE 
Sbjct: 476 SALRDDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQPEY 535

Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
             V+ G + +F C    D +L L+I WL+ +   +  S+ RF    D+ L V    + D 
Sbjct: 536 AVVQRGSTVSFECKVKHDHTLTLTITWLKDNG--ELPSDGRFTVDKDH-LEVADVRDSDG 592

Query: 377 GQYTCRAQTELDFIEAQATLTVQVPLEAPS----------NFTLIQVIDAKKAVVSWNPV 426
           G YTC A T LD + A A L+V  P   P+          +  L   +D K   +SW P 
Sbjct: 593 GAYTCVANTTLDMVSASAVLSVVAPTPTPAPIYDVPNPPFDLELTDQLD-KSVQLSWTPG 651

Query: 427 SPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
              +       + ++        G         G  TT ++ K  P      RV+A N  
Sbjct: 652 DDNN--SPITKFIIEYEDAMHEAGLWHHQTEVSGTQTTAQL-KLSPYVNYSFRVMAVNSL 708

Query: 487 YNGPPSE-----IISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPE---QPNGVLMGYK 538
               PSE     +     P+  P  V+ L + P       + W KP    + NG  + YK
Sbjct: 709 GRSLPSEPSEQYLTKAAEPDTNPTAVEGLGSEP---DNLVITW-KPLNGFESNGPGLQYK 764

Query: 539 IKYQSVKG 546
           + ++   G
Sbjct: 765 VSWRQKDG 772



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 158/646 (24%), Positives = 260/646 (40%), Gaps = 78/646 (12%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTC--EVSNGVGEAKSYSIDLSVLAA------PYF 128
           S+R+SQG  G       +    +  Y C    ++     +   I + V++A      P  
Sbjct: 191 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISAKPNRERPPT 250

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
            + PE   + +EE     ++ EC A GLP P I+W+     +             NR   
Sbjct: 251 FLTPEGNTSNKEELRGNVLSLECIAEGLPTPVIYWIKEDGTLPT-----------NRTFY 299

Query: 185 ENLRKS---------DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKT 235
            N +K+         D+GNY C A N+LG ++  + V V A AP    AP++     G+ 
Sbjct: 300 RNFKKTLQIIQVSEADSGNYQCIAKNALGAIHHTISVTVKA-APYWILAPQNLVLSPGED 358

Query: 236 VVLTCRVFGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNK 292
             L CR  G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N+
Sbjct: 359 GSLICRANGNPKPRISWLSNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNE 418

Query: 293 LGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPI 350
            G    +  + V       +T     Y+V A + A   C     P    +I W +G++  
Sbjct: 419 YGYLLANAFVNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGS 476

Query: 351 DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSN 407
               +   +  N  +L +  + +  +G YTC A+ +L   + +  L ++ P   ++ P  
Sbjct: 477 ALRDDIYVLHENG-TLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQPE- 534

Query: 408 FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE-GSIRELIVNKGESTTTE 466
           + ++Q    + + VS+     +    H     + TW + +GE  S     V+K      +
Sbjct: 535 YAVVQ----RGSTVSF---ECKVKHDHTLTLTI-TWLKDNGELPSDGRFTVDKDHLEVAD 586

Query: 467 VDKFVPASKNFARVLAFNGAYNG-PPSEIISFVTPEGVPGTVQSLEAIPLG-------SS 518
           V      S   A     N   +    S ++S V P   P  +  +   P           
Sbjct: 587 VRD----SDGGAYTCVANTTLDMVSASAVLSVVAPTPTPAPIYDVPNPPFDLELTDQLDK 642

Query: 519 AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
           +  L W   +  N  +  + I+Y+         L      +S  T T+A+L  L P   Y
Sbjct: 643 SVQLSWTPGDDNNSPITKFIIEYED--AMHEAGLWHHQTEVSG-TQTTAQLK-LSPYVNY 698

Query: 579 RIHLAGYTKAGDGAES----KYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNA 632
              +      G    S    +YL     P  NP  VEG GS P+NLVI+W  +   E N 
Sbjct: 699 SFRVMAVNSLGRSLPSEPSEQYLTKAAEPDTNPTAVEGLGSEPDNLVITWKPLNGFESNG 758

Query: 633 PHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           P  +Y++ WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 759 PGLQYKVSWRQKDGDDEWAS--VVVANVSKYIVSGTPTFVPYLIKV 802



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 17/204 (8%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR------ 453
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  K  EGS++      
Sbjct: 825  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYW--KAQEGSLKRNRRHI 881

Query: 454  --ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLE 511
              +++  +G  T   +    P S     V   NG   GP S    F TPEGVP    SL+
Sbjct: 882  EKKILTFQGSKTHGMLPGLEPFSHYALNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLK 941

Query: 512  AIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKL 569
             +     +  L+W  P +PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L
Sbjct: 942  IVNPTLDSLTLEWDPPSRPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWTL 997

Query: 570  AGLEPSTKYRIHLAGYTKAGDGAE 593
              L  ST+Y+ +    T AG G++
Sbjct: 998  KNLNFSTRYKFYFYAQTAAGSGSQ 1021



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 146/614 (23%), Positives = 235/614 (38%), Gaps = 78/614 (12%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 361 LICRANGNPKPRISWLSNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 416

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T                +C   G P P I W    K 
Sbjct: 417 NEYGYLLANAF-VNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 474

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A  +    +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 475 -GSALRDDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQ 532

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P+      G TV   C+V         + W+ +  EL + GR+T+ +   L++ DV  +D
Sbjct: 533 PEYAVVQRGSTVSFECKVKHDHTLTLTITWLKDNGELPSDGRFTV-DKDHLEVADVRDSD 591

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHT-------HITDQPEDYEVEAGQSATFRCNAVSD 334
            G YTC A   L     S  L+V   T        + + P D E+              D
Sbjct: 592 GGAYTCVANTTLDMVSASAVLSVVAPTPTPAPIYDVPNPPFDLELTDQL----------D 641

Query: 335 PSLKLSIVWLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
            S++LS  W  G +   PI     E E    ++  +      S    + Q          
Sbjct: 642 KSVQLS--WTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTEVSGTQTTAQLKLSPYVNYS 699

Query: 389 F-IEAQATLTVQVP-----------LEAPSNFTLIQVIDAK--KAVVSWNPVSPQSLRGH 434
           F + A  +L   +P            E  +N T ++ + ++    V++W P++     G 
Sbjct: 700 FRVMAVNSLGRSLPSEPSEQYLTKAAEPDTNPTAVEGLGSEPDNLVITWKPLNGFESNGP 759

Query: 435 FRGYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
              YKV +W +KDG+     ++V N  +   +    FVP      +V A N     P   
Sbjct: 760 GLQYKV-SWRQKDGDDEWASVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPA 815

Query: 494 IISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKY---QSVKGT 547
           ++   + E +P     ++    + S+   + W  V  +   G L GY+I Y   Q     
Sbjct: 816 VVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQEGSLK 875

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPD 606
           +    +E+       + T   L GLEP + Y +++      G+G A    +F  P     
Sbjct: 876 RNRRHIEKKILTFQGSKTHGMLPGLEPFSHYALNVRVVNGKGEGPASPDRVFNTP----- 930

Query: 607 NVEGRGSTPNNLVI 620
             EG  S P++L I
Sbjct: 931 --EGVPSAPSSLKI 942



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 123/296 (41%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   +TI  +   K++T  G Y
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGSGTLTINIMSEGKAETYEGVY 121

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPE-VNWI 253
            C A N  G    +  V   + +P  T+   +  T+ +G+++VL CR      P  + W+
Sbjct: 122 QCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLRNGQSLVLPCRPPLGLPPPIIFWM 181

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK---- 305
            N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK    
Sbjct: 182 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISA 241

Query: 306 ----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
               E       PE    + E   G   +  C A   P+    I W++  E     +   
Sbjct: 242 KPNRERPPTFLTPEGNTSNKEELRGNVLSLECIAEGLPT--PVIYWIK--EDGTLPTNRT 297

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
           F ++   +L + + SE DSG Y C A+  L  I    ++TV+     + AP N  L
Sbjct: 298 FYRNFKKTLQIIQVSEADSGNYQCIAKNALGAIHHTISVTVKAAPYWILAPQNLVL 353


>gi|444706383|gb|ELW47725.1| Neurofascin [Tupaia chinensis]
          Length = 1333

 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 192/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 246 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 304

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 305 SGEYFCLASNKMGSTR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 363

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 364 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 423

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 424 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 482

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 483 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 542

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKLSI WL+   P+   +    ++  + SLT+   +E D G YTC A TELD   A+A
Sbjct: 543 PSLKLSISWLKDDGPLYISNR---MKKEEDSLTIFGVAERDQGSYTCVASTELDQDLAKA 599

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 600 YLTVLADQATPTN 612



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 153/666 (22%), Positives = 259/666 (38%), Gaps = 77/666 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 220 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 277

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G     + V V A AP  
Sbjct: 278 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSTRHTISVRVKA-APYW 333

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 334 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 391

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 392 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 451

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 452 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 510

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIREL 455
            V+ P       T I  +   +       V  +    H    K+  +W + DG   I   
Sbjct: 511 EVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLSISWLKDDGPLYISNR 563

Query: 456 IVNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
           +  + +S T                 TE+D+ +  +K +  VLA       P + + +  
Sbjct: 564 MKKEEDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLADQAT---PTNRLAAL- 617

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
            P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   +
Sbjct: 618 -PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKF 675

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRG 612
              P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G
Sbjct: 676 ---PGSVNSAILQLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEG 732

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
           +  NN+ I+WT M       P+ +Y + WRR  T + WN   V  W  S  V+   P + 
Sbjct: 733 TRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRDTWNNATV--W-GSRYVVGQTPVYV 789

Query: 673 PYEIKV 678
           PYEI+V
Sbjct: 790 PYEIRV 795



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 99/224 (44%), Gaps = 15/224 (6%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP+    ++V+++    + WN V   +++
Sbjct: 791  YEIRVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVK-VRVLNSTAISLQWNRVYSDTVQ 849

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 850  GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVSRLFPYSNYKLEMVVVNGRG 909

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY +KY +  GT
Sbjct: 910  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLQTINLEWDHPEHPNGILIGYTLKYVAFNGT 969

Query: 548  KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            KVG   +++     P  T   +   +P ++YR  L+  T+ G G
Sbjct: 970  KVG---KQMAETFSPNQTKFTVQRADPVSRYRFTLSARTQVGSG 1010



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 119/298 (39%), Gaps = 34/298 (11%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK---- 305
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K    
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 230

Query: 306 ----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
               E T     P+       V  G      C A   P+    I W +     D  S+  
Sbjct: 231 RGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 286

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP-----LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++     + T++V+V      L+ P N  L
Sbjct: 287 KFENFNKALRITNVSEEDSGEYFCLASNKMG--STRHTISVRVKAAPYWLDEPKNLIL 342



 Score = 45.8 bits (107), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 29/206 (14%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQV 400
              Y+C A+      I+ +   T++V
Sbjct: 202 QTDYSCNARFHFTHTIQQKNPFTLKV 227


>gi|344277016|ref|XP_003410301.1| PREDICTED: neurofascin-like isoform 2 [Loxodonta africana]
          Length = 1174

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 135/391 (34%), Positives = 201/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PS +    N+ K+L I ++   D
Sbjct: 263 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSHKAKFENFNKALRITNISEED 321

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 322 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 380

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 381 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 440

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 441 PRML-SPRNQLMRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 499

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED  V+ G +    C    D
Sbjct: 500 KMIRKEDKGIYTCVATNILGKAENQVHLEVKDPTRIYQMPEDQVVKRGTTVQLPCRVKHD 559

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 560 PSLKLTVSWLKDDEPLYVGNR---MKKEDDSLTIFGVAERDQGSYTCIASTELDQDLAKA 616

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 617 HLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 646



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 153/671 (22%), Positives = 256/671 (38%), Gaps = 85/671 (12%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 220 KNPFTLKV-LTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLE 278

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 279 CIASGVPTPDIAWYKKGGDL---PSHKAKFENFNKALRITNISEEDSGEYFCLASNKMGS 335

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 336 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 394

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 395 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLMR 452

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 453 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDKGIYT 511

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   + V     V       H    K+
Sbjct: 512 CVATNILGKAENQVHLEVKDP-------TRIYQMPEDQVVKRGTTVQLPCRVKHDPSLKL 564

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII---- 495
             +W + D    +   +  + +S T            F       G+Y    S  +    
Sbjct: 565 TVSWLKDDEPLYVGNRMKKEDDSLTI-----------FGVAERDQGSYTCIASTELDQDL 613

Query: 496 --SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
             + +T  G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   
Sbjct: 614 AKAHLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWH 672

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDN 607
           +   +   P + ++ +  L P   Y+  +    + G    S      +     P  NP +
Sbjct: 673 DHSKF---PGSVNSAVLQLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAAPESNPAD 729

Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667
           V+G G+  NN+ I+WT M       P+ +Y + WRR  T + WN  +V  W  S  V+  
Sbjct: 730 VKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRDTWN--NVTVW-GSRYVVGQ 786

Query: 668 QPTFQPYEIKV 678
            P + PYEI+V
Sbjct: 787 TPVYVPYEIRV 797



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 102/225 (45%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP++   I+V+++    + WN V   +++
Sbjct: 793  YEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVK-IRVLNSTAISLQWNRVYSDTVQ 851

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+ T   V +  P S     ++  NG  
Sbjct: 852  GQLREYRAYYWRESSLLKNLWVSQKRQQASFLGDRTRGVVARLFPYSNYKLEMVVVNGRG 911

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY +KY +  GT
Sbjct: 912  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLQTINLEWDHPEHPNGILIGYTLKYVAFNGT 971

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            KVG  ++E       P  T   +   +P ++YR  L+  T+ G+G
Sbjct: 972  KVGKQIVENFA----PNQTKFTVPRADPVSRYRFTLSARTQVGNG 1012



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 117/313 (37%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPP---NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +  + A     + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGEPCPSFHWTRNSRFFNVAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 230

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 231 HPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PD 288

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S     ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 289 IAWYKKGG--DLPSHKAKFENFNKALRITNISEEDSGEYFCLASNKMGSIRHTISVRVKA 346

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 347 APYWLDEPKNLIL 359



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 29/213 (13%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L+  P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LSQPPTITKQSVKDHIVDPRDNILIECEAKGEPCPSFHWTRNSRFFNVAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQVPLEAPSN 407
              Y+C A+      I+ +   T++V    P N
Sbjct: 202 QTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN 234


>gi|35215309|ref|NP_874385.1| neurofascin isoform 1 precursor [Mus musculus]
 gi|38372295|sp|Q810U3.1|NFASC_MOUSE RecName: Full=Neurofascin; Flags: Precursor
 gi|29466308|emb|CAD65849.1| Neurofascin [Mus musculus]
          Length = 1240

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 134/372 (36%), Positives = 189/372 (50%), Gaps = 8/372 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PS++    N+ K+L I +V   D
Sbjct: 252 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSNKAKFENFNKALRITNVSEED 310

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 311 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 369

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 370 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 429

Query: 219 PEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKIT 275
           P +  A      V       L C  FG+P P + W  N +   L GG Y + E G L+I 
Sbjct: 430 PRMLSARNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIK 489

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
            +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    DP
Sbjct: 490 MIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHDP 549

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
           SLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A 
Sbjct: 550 SLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKAY 606

Query: 396 LTVQVPLEAPSN 407
           LTV      P+N
Sbjct: 607 LTVLADQATPTN 618



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 156/667 (23%), Positives = 264/667 (39%), Gaps = 79/667 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 167 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 225

Query: 113 AKSYSIDLSVLAA-----PYFTVEPEFINAAEE----ETVTFECKASGLPEPEIHWVHNG 163
              +++ +          P F + P+  ++++       +  EC ASG+P P+I W   G
Sbjct: 226 KNPFTLKVLTTRGVAERTPSF-MYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKG 284

Query: 164 KPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
             +   P N  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP   
Sbjct: 285 GDL---PSNKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYWL 340

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDV 277
           + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D 
Sbjct: 341 DEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRDT 398

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKE--HTHITDQPEDYEVEAGQSATFRCNAVSDP 335
             +    Y C   N+ G    +  ++V +     ++ + +   V         C     P
Sbjct: 399 QISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSARNQLIRVILYNRTRLDCPFFGSP 458

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
              L   W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  
Sbjct: 459 IPTLR--WFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVR 515

Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIRE 454
           L V+ P       T I  +   +       V  +    H    K+  +W + D    I  
Sbjct: 516 LEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 568

Query: 455 LIVNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
            +  + +S T                 TE+D+ +  +K +  VLA       P + + + 
Sbjct: 569 RMKKEDDSLTIFGVAERDQGSYTCMASTELDQDL--AKAYLTVLADQAT---PTNRLAAL 623

Query: 498 VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLP 557
             P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   
Sbjct: 624 --PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSR 680

Query: 558 YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGR 611
           +   P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G 
Sbjct: 681 F---PGSVNSAVLHLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGE 737

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
           G+  NN+ I+WT M       P+ +Y + WRR  T E WN  +V  W  S  V+   P +
Sbjct: 738 GTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQTPVY 794

Query: 672 QPYEIKV 678
            PYEI+V
Sbjct: 795 VPYEIRV 801



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 119/296 (40%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 57  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 116

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 117 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 176

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T 
Sbjct: 177 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 236

Query: 310 --ITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             + ++   +    G S++            C A   P+    I W +     D  S   
Sbjct: 237 RGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSNKA 292

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 293 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 348



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 9/172 (5%)

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           ++W P++  S  G    Y V+ W  ++   +   + V        +   +VP      RV
Sbjct: 746 ITWTPMNATSAFGPNLRYIVK-WRRRETRETWNNVTVWGSRYVVGQTPVYVPYE---IRV 801

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
            A N    GP  + I   + E +P   +             L+W  PE PNG+L+GY ++
Sbjct: 802 QAENDFGKGPEPDTIIGYSGEDLPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYILR 861

Query: 541 YQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           Y    GTK+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 862 YVPFNGTKLGKQMVENF----SPNQTKFSVQRADPVSRYRFSLSARTQVGSG 909



 Score = 47.0 bits (110), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++  
Sbjct: 35  NELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 94

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
                + D           GEY CFARNK GTA     L+ +    ++  P    E+ + 
Sbjct: 95  RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 149

Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 150 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 205

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
           D    Y+C A+      I+ +   T++V
Sbjct: 206 DMQTDYSCNARFHFTHTIQQKNPFTLKV 233


>gi|327271271|ref|XP_003220411.1| PREDICTED: neurofascin-like [Anolis carolinensis]
          Length = 1164

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 132/387 (34%), Positives = 200/387 (51%), Gaps = 11/387 (2%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           ++ LR + + L CI  G P P  +W K G  + P+ R    N+ K+L I +V   D G Y
Sbjct: 251 QMVLRGEDLLLECIASGVPTPGIMWHKKGGDL-PAGRTKLENFDKALHIANVSEEDSGEY 309

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C  SN VG ++ + I + V AAP++  EP+ +  A  E     C+A+G P+P I W+ N
Sbjct: 310 FCLASNKVGTSR-HVISVIVKAAPFWLDEPQNLILAPGEDGRLVCQANGNPKPSIQWLVN 368

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           G+PI  + PNP R+V  + I   +++   +  Y CNA+N  GY+  + +V+VL   P I 
Sbjct: 369 GEPIESSAPNPSREVTGDTIMFRDIQSGSSAVYQCNASNEHGYLLANAFVSVLDVIPRIL 428

Query: 223 EAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVA 278
            AP+++    +     +L C  FG+P P + W  N +   L GG Y   E G L+I    
Sbjct: 429 -APRNQLIKVILNNRTLLNCPFFGSPIPTLRWFKNGQGSTLHGGNYKAHENGTLEIIRAR 487

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
             D G YTC A N LG AQ    L +K+ T I D P+D   + G +    C  + DP+L+
Sbjct: 488 KEDQGTYTCVATNLLGKAQNQVRLEIKDPTRIIDGPKDAVPKKGSTVYLVCRTIHDPTLR 547

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           L++ WL+   P+   +    ++  D  LT+   SE D G YTC A TELD   A+A LT+
Sbjct: 548 LTVSWLKDDVPLYLGTR---IKKEDDGLTIYGVSEKDQGYYTCVASTELDKDTARAHLTI 604

Query: 399 QVPLEAPSNFTLIQVIDAKKAVVSWNP 425
               + P +  L   +  +   ++W P
Sbjct: 605 LARPDRPRDLELTD-LSERSVRLTWIP 630



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 146/620 (23%), Positives = 254/620 (40%), Gaps = 76/620 (12%)

Query: 15  ILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI 74
           +L N   + +       AP+ Q +    +V L N+ + L C F G+P+P   W K+G   
Sbjct: 412 LLANAFVSVLDVIPRILAPRNQLI----KVILNNRTL-LNCPFFGSPIPTLRWFKNG--- 463

Query: 75  NPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV 130
                +  GNY      +L I      DQG+YTC  +N +G+A++  + L +        
Sbjct: 464 -QGSTLHGGNYKAHENGTLEIIRARKEDQGTYTCVATNLLGKAQN-QVRLEIKDPTRIID 521

Query: 131 EPEFINAAEEETVTFECKASGLPEPE--IHWVHNGKPISQAPPNPRRKVGPNRITIENLR 188
            P+     +  TV   C+    P     + W+ +  P+       R K   + +TI  + 
Sbjct: 522 GPKDAVPKKGSTVYLVCRTIHDPTLRLTVSWLKDDVPLYLGT---RIKKEDDGLTIYGVS 578

Query: 189 KSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD--GKTVVLTCRVFGAP 246
           + D G Y C A+  L       ++ +LA      + P+D    D   ++V LT  + G  
Sbjct: 579 EKDQGYYTCVASTELDKDTARAHLTILARP----DRPRDLELTDLSERSVRLTW-IPGDD 633

Query: 247 K--PEVNWI--HNQKELTGGRYTILE----TGDLKITDVAFADSGEYTCFARNKLGTAQG 298
              P  ++I    +     GR+        + +  +  +A   + ++   A N++G++  
Sbjct: 634 NNSPITDYIVEFEEDRYEPGRWQNHSRYPGSVNSAVLRLAPYVNYQFRVIAVNEVGSSYP 693

Query: 299 SGSLTVKEHTHITDQPEDYEVEAGQSA------------TFRCNAVSDPSLKLSIVWLRG 346
           S      E  H      +Y     Q A                  V  P+L+  + W R 
Sbjct: 694 S---LPSERYHTNGARPEYNPTGVQGAGTAKNNMVISWTPLSATQVYGPNLRYIVKWRRR 750

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV------QV 400
                + +  R V+ +    TVT++       Y  + Q   D+  A    TV        
Sbjct: 751 DTRESWSN--RTVKGDVSQYTVTQTPIYTP--YEIKVQAVNDYGMAPEADTVIGYSGEDY 806

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK- 459
           P  AP++  L +V+++    + W+ V P++++G  + Y+   W E      ++ L V+K 
Sbjct: 807 PKAAPTDVRL-KVVNSTAVSLQWSKVYPETVQGQLKEYRAYYWRES---SLLKNLWVSKK 862

Query: 460 -------GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA 512
                  G+ T   V +  P S     ++  NG  +GP S+ + F TPEGVP T +    
Sbjct: 863 KQSMSFSGDRTRGIVSRLFPYSNYKLEMVVANGRGDGPRSDTLEFTTPEGVPSTPRYFRI 922

Query: 513 IPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAG 571
                    L+W  PE PNG L+GY ++YQ+  G+K G  ++E       P  T   L  
Sbjct: 923 RQPNLETITLEWEHPEHPNGNLIGYTLRYQAFNGSKTGRTVVENF----SPNQTRFVLQR 978

Query: 572 LEPSTKYRIHLAGYTKAGDG 591
            +P ++YR +L   ++ G+G
Sbjct: 979 TDPISRYRFNLRSRSQIGEG 998



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 145/674 (21%), Positives = 256/674 (37%), Gaps = 118/674 (17%)

Query: 73  PINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV----SNGVGEAKSYSIDL-------- 120
           PI+   R+SQG+ G       ++   Q  Y+C      ++ + +   Y++ +        
Sbjct: 160 PIHQDKRVSQGHNGDLYFSNVLQEDSQTDYSCNARFAFTHTIQQKNPYTLKVLTKHPLNE 219

Query: 121 -------SVLAAPYFT-VEPEFI---------NAAEEETVTFECKASGLPEPEIHWVHNG 163
                   + +A   T   P F+              E +  EC ASG+P P I W   G
Sbjct: 220 TSFRNHTDIYSARGITERHPSFMYPVGSPSSQMVLRGEDLLLECIASGVPTPGIMWHKKG 279

Query: 164 KPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
             +    P  R K+      + I N+ + D+G Y C A+N +G   + V   ++  AP  
Sbjct: 280 GDL----PAGRTKLENFDKALHIANVSEEDSGEYFCLASNKVG-TSRHVISVIVKAAPFW 334

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGD-LKITDVA 278
            + P++     G+   L C+  G PKP + W+ N +  E +    +   TGD +   D+ 
Sbjct: 335 LDEPQNLILAPGEDGRLVCQANGNPKPSIQWLVNGEPIESSAPNPSREVTGDTIMFRDIQ 394

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA--GQSATFRCNAVSDPS 336
              S  Y C A N+ G    +  ++V +       P +  ++          C     P 
Sbjct: 395 SGSSAVYQCNASNEHGYLLANAFVSVLDVIPRILAPRNQLIKVILNNRTLLNCPFFGSPI 454

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             L   W +  +             N  +L + ++ + D G YTC A   L   + Q  L
Sbjct: 455 PTLR--WFKNGQGSTLHGGNYKAHENG-TLEIIRARKEDQGTYTCVATNLLGKAQNQVRL 511

Query: 397 TVQ------------VPLEAPSNFTLIQVID--AKKAVVSWNPVSPQSLRGHFRGYKVQT 442
            ++            VP +  + + + + I     +  VSW       L+     Y + T
Sbjct: 512 EIKDPTRIIDGPKDAVPKKGSTVYLVCRTIHDPTLRLTVSW-------LKDDVPLY-LGT 563

Query: 443 WTEKDGEGSIRELIVNKGES-----TTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
             +K+ +G     +  K +       +TE+DK      + AR                + 
Sbjct: 564 RIKKEDDGLTIYGVSEKDQGYYTCVASTELDK------DTAR----------------AH 601

Query: 498 VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLP 557
           +T    P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G       
Sbjct: 602 LTILARPDRPRDLELTDLSERSVRLTWIPGDDNNSPITDYIVEFEEDR-YEPGRWQNHSR 660

Query: 558 YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG-------------DGAESKYLFYVPFKN 604
           Y   P + ++ +  L P   Y+  +    + G             +GA  +Y       N
Sbjct: 661 Y---PGSVNSAVLRLAPYVNYQFRVIAVNEVGSSYPSLPSERYHTNGARPEY-------N 710

Query: 605 PDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELV 664
           P  V+G G+  NN+VISWT +   +   P+ +Y + WRR +T E+W+   V     S+  
Sbjct: 711 PTGVQGAGTAKNNMVISWTPLSATQVYGPNLRYIVKWRRRDTRESWSNRTV-KGDVSQYT 769

Query: 665 LANQPTFQPYEIKV 678
           +   P + PYEIKV
Sbjct: 770 VTQTPIYTPYEIKV 783



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 115/319 (36%), Gaps = 59/319 (18%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI-----ENLRKSD-TGN 194
           + +  EC+A G P P   W  NGK  + A  +PR  +     T+        R  D  G 
Sbjct: 35  DNIFIECEAKGNPVPTFSWTRNGKFFNVA-KDPRVSMRHWSGTLAVDFRSGGRPEDYEGE 93

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPE-VNW 252
           Y C A N  G    +     ++ +P   +   D   V +G  ++L C       P  + W
Sbjct: 94  YQCFARNDFGTAISNKIFLQVSKSPLWPKENLDIQEVHEGAQLILACNPPPGLPPPAIFW 153

Query: 253 -------IHNQKELTGGRYTILETGDLKITDVAFADS-GEYTCFARN------------- 291
                  IH  K ++ G       GDL  ++V   DS  +Y+C AR              
Sbjct: 154 MSSSMEPIHQDKRVSQG-----HNGDLYFSNVLQEDSQTDYSCNARFAFTHTIQQKNPYT 208

Query: 292 -KLGTAQGSGSLTVKEHTHI----------------TDQPEDYEVEAGQSATFRCNAVSD 334
            K+ T       + + HT I                   P    V  G+     C A   
Sbjct: 209 LKVLTKHPLNETSFRNHTDIYSARGITERHPSFMYPVGSPSSQMVLRGEDLLLECIASGV 268

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           P+    I+W +     D  +    +++ D +L +   SE DSG+Y C A  ++       
Sbjct: 269 PT--PGIMWHKKGG--DLPAGRTKLENFDKALHIANVSEEDSGEYFCLASNKVGTSRHVI 324

Query: 395 TLTVQVP---LEAPSNFTL 410
           ++ V+     L+ P N  L
Sbjct: 325 SVIVKAAPFWLDEPQNLIL 343


>gi|297289130|ref|XP_002803475.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Macaca
           mulatta]
 gi|387539346|gb|AFJ70300.1| neuronal cell adhesion molecule isoform D precursor [Macaca
           mulatta]
          Length = 1211

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 139/394 (35%), Positives = 199/394 (50%), Gaps = 21/394 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  + P +R    N+ K+L I HV  +D G+Y C
Sbjct: 283 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIIHVSEADSGNYQC 340

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+   P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 341 IAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 399

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 400 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 459

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 460 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 519

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 520 TGTYTCVARNKLGMAKNEVHLEIKDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTV 579

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  S+ RF    D+ L +   S+ DSG YTC A T LD + A A L+V  P
Sbjct: 580 LWLKDNR--ELPSDERFTVDKDH-LVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAP 636

Query: 402 LEAPS----------NFTLIQVIDAKKAVVSWNP 425
              P+          +  L   +D K   +SW P
Sbjct: 637 TPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWTP 669



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 147/565 (26%), Positives = 238/565 (42%), Gaps = 60/565 (10%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W    K     P N  R V  N    + I ++ ++D+GNY C A
Sbjct: 288 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 342

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QK 257
            N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 343 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 401

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N+ G    +  + V         P +
Sbjct: 402 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPAN 461

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + + 
Sbjct: 462 TLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKD 518

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
            +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q    + ++VS+       +
Sbjct: 519 STGTYTCVARNKLGMAKNEVHLEIKDPTWIIKQPE-YAVVQ----RGSMVSFE----CKV 569

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG-- 489
           +  +       W + +     REL  +  E  T + D  V A  +      +    N   
Sbjct: 570 KHDYTLTLTVLWLKDN-----RELPSD--ERFTVDKDHLVIADVSDNDSGTYTCVANTTL 622

Query: 490 ---PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKI 539
                S ++S V P   P  V  +   P           +  L W   +  N  +  + I
Sbjct: 623 DSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFII 682

Query: 540 KYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESK 595
           +Y+    T   P L         T T+A+L  L P   Y   +      G      A  +
Sbjct: 683 EYED---TMHEPGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNSIGKSLPSEASEQ 738

Query: 596 YLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQD 653
           YL     P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W   
Sbjct: 739 YLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS- 797

Query: 654 DVLDWRQSELVLANQPTFQPYEIKV 678
            V+    S+ +++  PTF PY IKV
Sbjct: 798 -VVVANVSKYIVSGTPTFVPYLIKV 821



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 844  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 902

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 903  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 962

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 963  PTLDSLTLEWHPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 1018

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1019 NFSTRYKFYFYAQTSAGSGSQ 1039



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 138/605 (22%), Positives = 225/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 380 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 436 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 493

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 494 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIIKQ 551

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L I DV+  DS
Sbjct: 552 PEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKDNRELPSDERFTVDKDHLVIADVSDNDS 611

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 612 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 666

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 667 WTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 726

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 727 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 785

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 786 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAVVMGHSGE 842

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 843 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 902

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 903 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 955

Query: 616 NNLVI 620
           ++L I
Sbjct: 956 SSLKI 960



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 126/315 (40%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 E------HTHITDQPEDYEVEAGQSATFR--------CNAVSDPSLKLSIVWLRG----- 346
                  +  I     D E    +S+  R         NA +   L+ +++ L       
Sbjct: 238 VISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGL 297

Query: 347 SEPIDFESEP-------RFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             PI + ++        R V  N + +L +   SE DSG Y C A+  L  I    ++ V
Sbjct: 298 PTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRV 357

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 358 KAAPYWITAPQNLVL 372


>gi|410952032|ref|XP_003982693.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Felis catus]
          Length = 1193

 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 170/548 (31%), Positives = 250/548 (45%), Gaps = 39/548 (7%)

Query: 24  ISASQNRHAPKQQYV----TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR 79
           ISA  NR  P         T  KE  LR   + L CI  G P P   W K+   + P++R
Sbjct: 239 ISAKPNRERPPTFLTPEGNTSNKE-ELRGNVLSLECIAEGLPTPVIYWIKEDGTL-PTNR 296

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAE 139
               N+ K+L I  V  +D G+Y C   N +G A  ++I ++V AAPY+ + P+ +  + 
Sbjct: 297 TFYRNFKKTLQIIQVSEADSGNYQCIAKNALG-AIHHTISVTVKAAPYWILAPQNLVLSP 355

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA 199
            E  +  C+A+G P+P I W+ NG PI  AP +P RK+  + I   N+++  +  Y CNA
Sbjct: 356 GEDGSLICRANGNPKPRISWLSNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNA 415

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK- 257
           +N  GY+  + +VNVLA  P I  +    Y V   +  +L C  FG+P P + W    K 
Sbjct: 416 SNEYGYLLANAFVNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKG 475

Query: 258 -ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
             L    Y + E G L+I       +G YTC ARNKLG A+    L +K+ T I  QPE 
Sbjct: 476 SALRDDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQPEY 535

Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
             V+ G + +F C    D +L L+I WL+ +   +  S+ RF    D+ L V    + D 
Sbjct: 536 AVVQRGSTVSFECKVKHDHTLTLTITWLKDNG--ELPSDGRFTVDKDH-LEVADVRDSDG 592

Query: 377 GQYTCRAQTELDFIEAQATLTVQVPLEAPS----------NFTLIQVIDAKKAVVSWNPV 426
           G YTC A T LD + A A L+V  P   P+          +  L   +D K   +SW P 
Sbjct: 593 GAYTCVANTTLDMVSASAVLSVVAPTPTPAPIYDVPNPPFDLELTDQLD-KSVQLSWTPG 651

Query: 427 SPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
              +       + ++        G         G  TT ++ K  P      RV+A N  
Sbjct: 652 DDNN--SPITKFIIEYEDAMHEAGLWHHQTEVSGTQTTAQL-KLSPYVNYSFRVMAVNSL 708

Query: 487 YNGPPSE-----IISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPE---QPNGVLMGYK 538
               PSE     +     P+  P  V+ L + P       + W KP    + NG  + YK
Sbjct: 709 GRSLPSEPSEQYLTKAAEPDTNPTAVEGLGSEP---DNLVITW-KPLNGFESNGPGLQYK 764

Query: 539 IKYQSVKG 546
           + ++   G
Sbjct: 765 VSWRQKDG 772



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 158/646 (24%), Positives = 260/646 (40%), Gaps = 78/646 (12%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTC--EVSNGVGEAKSYSIDLSVLAA------PYF 128
           S+R+SQG  G       +    +  Y C    ++     +   I + V++A      P  
Sbjct: 191 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISAKPNRERPPT 250

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
            + PE   + +EE     ++ EC A GLP P I+W+     +             NR   
Sbjct: 251 FLTPEGNTSNKEELRGNVLSLECIAEGLPTPVIYWIKEDGTLPT-----------NRTFY 299

Query: 185 ENLRKS---------DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKT 235
            N +K+         D+GNY C A N+LG ++  + V V A AP    AP++     G+ 
Sbjct: 300 RNFKKTLQIIQVSEADSGNYQCIAKNALGAIHHTISVTVKA-APYWILAPQNLVLSPGED 358

Query: 236 VVLTCRVFGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNK 292
             L CR  G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N+
Sbjct: 359 GSLICRANGNPKPRISWLSNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNE 418

Query: 293 LGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPI 350
            G    +  + V       +T     Y+V A + A   C     P    +I W +G++  
Sbjct: 419 YGYLLANAFVNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGS 476

Query: 351 DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSN 407
               +   +  N  +L +  + +  +G YTC A+ +L   + +  L ++ P   ++ P  
Sbjct: 477 ALRDDIYVLHENG-TLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQPE- 534

Query: 408 FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE-GSIRELIVNKGESTTTE 466
           + ++Q    + + VS+     +    H     + TW + +GE  S     V+K      +
Sbjct: 535 YAVVQ----RGSTVSF---ECKVKHDHTLTLTI-TWLKDNGELPSDGRFTVDKDHLEVAD 586

Query: 467 VDKFVPASKNFARVLAFNGAYNG-PPSEIISFVTPEGVPGTVQSLEAIPLG-------SS 518
           V      S   A     N   +    S ++S V P   P  +  +   P           
Sbjct: 587 VRD----SDGGAYTCVANTTLDMVSASAVLSVVAPTPTPAPIYDVPNPPFDLELTDQLDK 642

Query: 519 AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
           +  L W   +  N  +  + I+Y+         L      +S  T T+A+L  L P   Y
Sbjct: 643 SVQLSWTPGDDNNSPITKFIIEYED--AMHEAGLWHHQTEVSG-TQTTAQLK-LSPYVNY 698

Query: 579 RIHLAGYTKAGDGAES----KYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNA 632
              +      G    S    +YL     P  NP  VEG GS P+NLVI+W  +   E N 
Sbjct: 699 SFRVMAVNSLGRSLPSEPSEQYLTKAAEPDTNPTAVEGLGSEPDNLVITWKPLNGFESNG 758

Query: 633 PHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           P  +Y++ WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 759 PGLQYKVSWRQKDGDDEWAS--VVVANVSKYIVSGTPTFVPYLIKV 802



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 17/204 (8%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR------ 453
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  K  EGS++      
Sbjct: 825  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYW--KAQEGSLKRNRRHI 881

Query: 454  --ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLE 511
              +++  +G  T   +    P S     V   NG   GP S    F TPEGVP    SL+
Sbjct: 882  EKKILTFQGSKTHGMLPGLEPFSHYALNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLK 941

Query: 512  AIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKL 569
             +     +  L+W  P +PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L
Sbjct: 942  IVNPTLDSLTLEWDPPSRPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWTL 997

Query: 570  AGLEPSTKYRIHLAGYTKAGDGAE 593
              L  ST+Y+ +    T AG G++
Sbjct: 998  KNLNFSTRYKFYFYAQTAAGSGSQ 1021



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 146/614 (23%), Positives = 235/614 (38%), Gaps = 78/614 (12%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 361 LICRANGNPKPRISWLSNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 416

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T                +C   G P P I W    K 
Sbjct: 417 NEYGYLLANAF-VNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 474

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A  +    +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 475 -GSALRDDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQ 532

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P+      G TV   C+V         + W+ +  EL + GR+T+ +   L++ DV  +D
Sbjct: 533 PEYAVVQRGSTVSFECKVKHDHTLTLTITWLKDNGELPSDGRFTV-DKDHLEVADVRDSD 591

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHT-------HITDQPEDYEVEAGQSATFRCNAVSD 334
            G YTC A   L     S  L+V   T        + + P D E+              D
Sbjct: 592 GGAYTCVANTTLDMVSASAVLSVVAPTPTPAPIYDVPNPPFDLELTDQL----------D 641

Query: 335 PSLKLSIVWLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
            S++LS  W  G +   PI     E E    ++  +      S    + Q          
Sbjct: 642 KSVQLS--WTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTEVSGTQTTAQLKLSPYVNYS 699

Query: 389 F-IEAQATLTVQVP-----------LEAPSNFTLIQVIDAK--KAVVSWNPVSPQSLRGH 434
           F + A  +L   +P            E  +N T ++ + ++    V++W P++     G 
Sbjct: 700 FRVMAVNSLGRSLPSEPSEQYLTKAAEPDTNPTAVEGLGSEPDNLVITWKPLNGFESNGP 759

Query: 435 FRGYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
              YKV +W +KDG+     ++V N  +   +    FVP      +V A N     P   
Sbjct: 760 GLQYKV-SWRQKDGDDEWASVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPA 815

Query: 494 IISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKY---QSVKGT 547
           ++   + E +P     ++    + S+   + W  V  +   G L GY+I Y   Q     
Sbjct: 816 VVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQEGSLK 875

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPD 606
           +    +E+       + T   L GLEP + Y +++      G+G A    +F  P     
Sbjct: 876 RNRRHIEKKILTFQGSKTHGMLPGLEPFSHYALNVRVVNGKGEGPASPDRVFNTP----- 930

Query: 607 NVEGRGSTPNNLVI 620
             EG  S P++L I
Sbjct: 931 --EGVPSAPSSLKI 942



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 123/296 (41%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   +TI  +   K++T  G Y
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGSGTLTINIMSEGKAETYEGVY 121

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPE-VNWI 253
            C A N  G    +  V   + +P  T+   +  T+ +G+++VL CR      P  + W+
Sbjct: 122 QCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLRNGQSLVLPCRPPLGLPPPIIFWM 181

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK---- 305
            N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK    
Sbjct: 182 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISA 241

Query: 306 ----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
               E       PE    + E   G   +  C A   P+    I W++  E     +   
Sbjct: 242 KPNRERPPTFLTPEGNTSNKEELRGNVLSLECIAEGLPT--PVIYWIK--EDGTLPTNRT 297

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
           F ++   +L + + SE DSG Y C A+  L  I    ++TV+     + AP N  L
Sbjct: 298 FYRNFKKTLQIIQVSEADSGNYQCIAKNALGAIHHTISVTVKAAPYWILAPQNLVL 353


>gi|402864559|ref|XP_003896527.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Papio anubis]
          Length = 1211

 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 139/394 (35%), Positives = 199/394 (50%), Gaps = 21/394 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  + P +R    N+ K+L I HV  +D G+Y C
Sbjct: 283 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIIHVSEADSGNYQC 340

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+   P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 341 IAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 399

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 400 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 459

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 460 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 519

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 520 TGTYTCVARNKLGMAKNEVHLEIKDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTV 579

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  S+ RF    D+ L +   S+ DSG YTC A T LD + A A L+V  P
Sbjct: 580 LWLKDNR--ELPSDERFTVDKDH-LVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAP 636

Query: 402 LEAPS----------NFTLIQVIDAKKAVVSWNP 425
              P+          +  L   +D K   +SW P
Sbjct: 637 TPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWTP 669



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 147/565 (26%), Positives = 238/565 (42%), Gaps = 60/565 (10%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W    K     P N  R V  N    + I ++ ++D+GNY C A
Sbjct: 288 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 342

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QK 257
            N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 343 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 401

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N+ G    +  + V         P +
Sbjct: 402 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPAN 461

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + + 
Sbjct: 462 TLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKD 518

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
            +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q    + ++VS+       +
Sbjct: 519 STGTYTCVARNKLGMAKNEVHLEIKDPTWIIKQPE-YAVVQ----RGSMVSFE----CKV 569

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG-- 489
           +  +       W + +     REL  +  E  T + D  V A  +      +    N   
Sbjct: 570 KHDYTLTLTVLWLKDN-----RELPSD--ERFTVDKDHLVIADVSDNDSGTYTCVANTTL 622

Query: 490 ---PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKI 539
                S ++S V P   P  V  +   P           +  L W   +  N  +  + I
Sbjct: 623 DSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFII 682

Query: 540 KYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESK 595
           +Y+    T   P L         T T+A+L  L P   Y   +      G      A  +
Sbjct: 683 EYED---TMHEPGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNSIGKSLPSEASEQ 738

Query: 596 YLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQD 653
           YL     P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W   
Sbjct: 739 YLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS- 797

Query: 654 DVLDWRQSELVLANQPTFQPYEIKV 678
            V+    S+ +++  PTF PY IKV
Sbjct: 798 -VVVANVSKYIVSGTPTFVPYLIKV 821



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 844  LPMVAPGNVR-VNVVNSTLAEVRWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 902

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 903  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 962

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 963  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 1018

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1019 NFSTRYKFYFYAQTSAGSGSQ 1039



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 138/605 (22%), Positives = 226/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 380 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 436 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 493

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 494 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIIKQ 551

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L I DV+  DS
Sbjct: 552 PEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKDNRELPSDERFTVDKDHLVIADVSDNDS 611

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 612 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 666

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 667 WTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 726

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 727 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 785

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 786 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAVVMGHSGE 842

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   ++W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 843 DLPMVAPGNVRVNVVNSTLAEVRWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 902

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 903 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 955

Query: 616 NNLVI 620
           ++L I
Sbjct: 956 SSLKI 960



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 126/315 (40%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 118 EGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237

Query: 306 E------HTHITDQPEDYEVEAGQSATFR--------CNAVSDPSLKLSIVWLRG----- 346
                  +  I     D E    +S+  R         NA +   L+ +++ L       
Sbjct: 238 VISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGL 297

Query: 347 SEPIDFESEP-------RFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             PI + ++        R V  N + +L +   SE DSG Y C A+  L  I    ++ V
Sbjct: 298 PTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRV 357

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 358 KAAPYWITAPQNLVL 372


>gi|380798907|gb|AFE71329.1| neuronal cell adhesion molecule isoform D precursor, partial
           [Macaca mulatta]
          Length = 1185

 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 139/394 (35%), Positives = 199/394 (50%), Gaps = 21/394 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  + P +R    N+ K+L I HV  +D G+Y C
Sbjct: 257 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIIHVSEADSGNYQC 314

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+   P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 315 IAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 373

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 374 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 433

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 434 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 493

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 494 TGTYTCVARNKLGMAKNEVHLEIKDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTV 553

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  S+ RF    D+ L +   S+ DSG YTC A T LD + A A L+V  P
Sbjct: 554 LWLKDNR--ELPSDERFTVDKDH-LVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAP 610

Query: 402 LEAPS----------NFTLIQVIDAKKAVVSWNP 425
              P+          +  L   +D K   +SW P
Sbjct: 611 TPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWTP 643



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 147/565 (26%), Positives = 238/565 (42%), Gaps = 60/565 (10%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W    K     P N  R V  N    + I ++ ++D+GNY C A
Sbjct: 262 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 316

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QK 257
            N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 317 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 375

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N+ G    +  + V         P +
Sbjct: 376 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPAN 435

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + + 
Sbjct: 436 TLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKD 492

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
            +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q    + ++VS+       +
Sbjct: 493 STGTYTCVARNKLGMAKNEVHLEIKDPTWIIKQPE-YAVVQ----RGSMVSFE----CKV 543

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG-- 489
           +  +       W + +     REL  +  E  T + D  V A  +      +    N   
Sbjct: 544 KHDYTLTLTVLWLKDN-----RELPSD--ERFTVDKDHLVIADVSDNDSGTYTCVANTTL 596

Query: 490 ---PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKI 539
                S ++S V P   P  V  +   P           +  L W   +  N  +  + I
Sbjct: 597 DSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFII 656

Query: 540 KYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESK 595
           +Y+    T   P L         T T+A+L  L P   Y   +      G      A  +
Sbjct: 657 EYED---TMHEPGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNSIGKSLPSEASEQ 712

Query: 596 YLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQD 653
           YL     P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W   
Sbjct: 713 YLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS- 771

Query: 654 DVLDWRQSELVLANQPTFQPYEIKV 678
            V+    S+ +++  PTF PY IKV
Sbjct: 772 -VVVANVSKYIVSGTPTFVPYLIKV 795



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 818  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 876

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 877  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 936

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 937  PTLDSLTLEWHPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 992

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 993  NFSTRYKFYFYAQTSAGSGSQ 1013



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 138/605 (22%), Positives = 225/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 354 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 409

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 410 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 467

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 468 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIIKQ 525

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L I DV+  DS
Sbjct: 526 PEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKDNRELPSDERFTVDKDHLVIADVSDNDS 585

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 586 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 640

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 641 WTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 700

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 701 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 759

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 760 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAVVMGHSGE 816

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 817 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 876

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 877 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 929

Query: 616 NNLVI 620
           ++L I
Sbjct: 930 SSLKI 934



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 126/315 (40%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 36  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 91

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 92  EGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 151

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 152 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 211

Query: 306 E------HTHITDQPEDYEVEAGQSATFR--------CNAVSDPSLKLSIVWLRG----- 346
                  +  I     D E    +S+  R         NA +   L+ +++ L       
Sbjct: 212 VISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGL 271

Query: 347 SEPIDFESEP-------RFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             PI + ++        R V  N + +L +   SE DSG Y C A+  L  I    ++ V
Sbjct: 272 PTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRV 331

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 332 KAAPYWITAPQNLVL 346


>gi|332248118|ref|XP_003273209.1| PREDICTED: neurofascin-like isoform 1 [Nomascus leucogenys]
          Length = 721

 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 132/364 (36%), Positives = 190/364 (52%), Gaps = 10/364 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 354 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 412

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 413 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 471

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 472 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 531

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 532 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 590

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 591 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 650

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 651 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 707

Query: 395 TLTV 398
            LTV
Sbjct: 708 YLTV 711



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 143/365 (39%), Gaps = 32/365 (8%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 269 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 327

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 328 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 385

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 386 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 441

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 442 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 499

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 500 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 559

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 560 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 618

Query: 397 TVQVP 401
            V+ P
Sbjct: 619 EVKDP 623



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 19/210 (9%)

Query: 15  ILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI 74
           +L N   + +       +P+ Q +     V L N+   L C F G+P+P   W K+G   
Sbjct: 519 LLANAFVSVLDVPPRMLSPRNQLI----RVILYNR-TRLDCPFFGSPIPTLRWFKNGQGS 573

Query: 75  NPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV 130
           N    +  GNY      SL IK +   DQG YTC  +N +G+A++  + L V        
Sbjct: 574 N----LDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAEN-QVRLEVKDPTRIYR 628

Query: 131 EPEFINAAEEETVTFECKASGLPEPE--IHWVHNGKPISQAPPNPRRKVGPNRITIENLR 188
            PE   A    TV  EC+    P  +  + W+ + +P+       R K   + +TI  + 
Sbjct: 629 MPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN---RMKKEDDSLTIFGVA 685

Query: 189 KSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           + D G+Y C A+  L       Y+ VL + 
Sbjct: 686 ERDQGSYTCVASTELDQDLAKAYLTVLGNC 715



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 117/297 (39%), Gaps = 30/297 (10%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGN 194
            + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G 
Sbjct: 158 RDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGE 217

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNW 252
           Y C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W
Sbjct: 218 YQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFW 277

Query: 253 IHNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK--- 305
           + +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K   
Sbjct: 278 MSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLT 337

Query: 306 -----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
                E T     P+       V  G      C A   P+    I W +     D  S+ 
Sbjct: 338 TRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDK 393

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
              ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 394 AKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 450



 Score = 46.6 bits (109), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++  
Sbjct: 137 NELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 196

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
                + D           GEY CFARNK GTA     L+ +    ++  P    E+ + 
Sbjct: 197 RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 251

Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 252 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 307

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
           D    Y+C A+      I+ +   T++V
Sbjct: 308 DMQTDYSCNARFHFTHTIQQKNPFTLKV 335


>gi|292619688|ref|XP_693332.4| PREDICTED: protein sidekick-2 [Danio rerio]
          Length = 2181

 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 191/638 (29%), Positives = 284/638 (44%), Gaps = 36/638 (5%)

Query: 8   EYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQ--T 65
           E K G  I L+V   G  A  +  AP      R   V     +V + C+    PL +   
Sbjct: 179 ENKTGQHITLSVENVGGPA--DPIAPTIVIPPRNTSVISGTSEVTMECVANARPLIKLSI 236

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE--VSNGVGEAKSYSIDLSVL 123
            W KDGV +    R    ++ + L +     SD G Y CE  + +    A S    L VL
Sbjct: 237 SWKKDGVLV----RSGLSDFNRRLTVLSPAVSDSGFYECEAVLRSSSVPAVSAGAYLHVL 292

Query: 124 AAPYFTVEPE-FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
             P F  EPE  I A  E+ V   C+A G+P+P+I W  +  PIS       R +    +
Sbjct: 293 EPPQFVKEPEKHITAEMEKVVDIPCQARGVPQPDIVWYKDAVPISPVKTPRYRVLSGGSL 352

Query: 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRV 242
            +  L   DTG + C A N  G V  + Y+ V + AP IT  P D   +DG +V+L C  
Sbjct: 353 QVNGLLPDDTGMFQCFARNQAGEVQTNTYLAVTSIAPNITAGPSDSTVIDGMSVILHCET 412

Query: 243 FGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQ 297
            GAP+P + W   ++ L  G     R+T+LE+G L I+    +D+G YTC A N  G  +
Sbjct: 413 SGAPRPAITWQKGERVLASGSVQLPRFTLLESGSLLISPSHISDAGTYTCMASNSRGIDE 472

Query: 298 GSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
            S  L V   T IT+ P+D  V  G  AT  C    DPS+ +  VW +  + I  +  PR
Sbjct: 473 ASADLVVWARTRITNPPQDQSVIKGTKATMTCGVTHDPSVSVRFVWEKDGQVIVTQGLPR 532

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAK 417
                + +L ++++   D G YTCR  +        A L V+    AP N + +     K
Sbjct: 533 LRLDVNGTLHISQTWSGDIGTYTCRVTSVGGNDSRNAHLRVRQLPHAPENPSAVLSSTEK 592

Query: 418 KAV-VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVN-KGESTTTEVDKFVPASK 475
           +A+ ++W    P         Y ++  +E +   ++  L+ N + EST   V+  +PA  
Sbjct: 593 RAINLTW--AKPFDGNSPLIRYILEV-SENNAPWTV--LLANIEPESTAVTVNGLIPARS 647

Query: 476 NFARVLAFNGAYNGPPSEIISFVT-PEGVPGT-VQSLEAIPLGSSAFYLKWVKPEQP--N 531
              R+ A N    G  S+    V+ PE  P    Q++ A    + +  ++W  P +   N
Sbjct: 648 YQFRLCAVNDVGKGQFSKETDRVSLPEEPPSAPPQNVIASGRTNQSIMIQWQPPPESHQN 707

Query: 532 GVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           G+L GY I+Y+ + G    P+  +   IS+P  T+  L  L   T Y I +A Y  AG G
Sbjct: 708 GILRGYIIRYR-LTGL---PVDIQYKNISNPDVTNLLLEDLIIWTNYEIEVAAYNGAGLG 763

Query: 592 AESK-----YLFYVPFKNPDNVEGRGSTPNNLVISWTA 624
                     L  VP   P NV+        +  +WTA
Sbjct: 764 VYCHKVTEWTLQGVPTIAPGNVKAEPVNSTTIRFTWTA 801



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 174/660 (26%), Positives = 267/660 (40%), Gaps = 75/660 (11%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE-VSNGVGEAKS-YSI 118
           P PQ  W +DG  I PS RI+      +L+I      D G Y  + V++  GE K+   I
Sbjct: 128 PQPQVTWFRDGRKIPPSSRIAI-TLDNTLVILSTVAPDAGRYYVQAVNDKNGENKTGQHI 186

Query: 119 DLSV--------LAAPYFTVEPE---FINAAEEETVTFECKASGLP--EPEIHWVHNGKP 165
            LSV          AP   + P     I+   E  VT EC A+  P  +  I W  +G  
Sbjct: 187 TLSVENVGGPADPIAPTIVIPPRNTSVISGTSE--VTMECVANARPLIKLSISWKKDGVL 244

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA---TNSLGYVYKDVYVNVLAHAPEIT 222
           +     +  R     R+T+ +   SD+G Y C A   ++S+  V    Y++VL   P+  
Sbjct: 245 VRSGLSDFNR-----RLTVLSPAVSDSGFYECEAVLRSSSVPAVSAGAYLHVL-EPPQFV 298

Query: 223 EAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQKELT---GGRYTILETGDLKITDVA 278
           + P+   T + + VV + C+  G P+P++ W  +   ++     RY +L  G L++  + 
Sbjct: 299 KEPEKHITAEMEKVVDIPCQARGVPQPDIVWYKDAVPISPVKTPRYRVLSGGSLQVNGLL 358

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKE-HTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
             D+G + CFARN+ G  Q +  L V     +IT  P D  V  G S    C     P  
Sbjct: 359 PDDTGMFQCFARNQAGEVQTNTYLAVTSIAPNITAGPSDSTVIDGMSVILHCETSGAP-- 416

Query: 338 KLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
           + +I W +G   +   S   PRF      SL ++ S   D+G YTC A       EA A 
Sbjct: 417 RPAITWQKGERVLASGSVQLPRFTLLESGSLLISPSHISDAGTYTCMASNSRGIDEASAD 476

Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIREL 455
           L V       +      VI   KA ++       S+   F       W EKDG     ++
Sbjct: 477 LVVWARTRITNPPQDQSVIKGTKATMTCGVTHDPSVSVRF------VW-EKDG-----QV 524

Query: 456 IVNKG-ESTTTEVDKFVPASKNFA--------RVLAFNGAYNGPPSEIISFV--TPEGVP 504
           IV +G      +V+  +  S+ ++        RV +  G  +      +  +   PE   
Sbjct: 525 IVTQGLPRLRLDVNGTLHISQTWSGDIGTYTCRVTSVGGNDSRNAHLRVRQLPHAPENPS 584

Query: 505 GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT 564
             + S E       A  L W KP   N  L+ Y ++  S        LL  +    +P +
Sbjct: 585 AVLSSTE-----KRAINLTWAKPFDGNSPLIRYILEV-SENNAPWTVLLANI----EPES 634

Query: 565 TSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV------PFKNPDNVEGRGSTPNNL 618
           T+  + GL P+  Y+  L      G G  SK    V      P   P NV   G T  ++
Sbjct: 635 TAVTVNGLIPARSYQFRLCAVNDVGKGQFSKETDRVSLPEEPPSAPPQNVIASGRTNQSI 694

Query: 619 VISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           +I W   PE   N     Y I +R           ++ +   + L+L +   +  YEI+V
Sbjct: 695 MIQWQPPPESHQNGILRGYIIRYRLTGLPVDIQYKNISNPDVTNLLLEDLIIWTNYEIEV 754



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 147/597 (24%), Positives = 227/597 (38%), Gaps = 88/597 (14%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEV 106
           V L C   G P P   W K G  +  S  +    +      SL+I     SD G+YTC  
Sbjct: 406 VILHCETSGAPRPAITWQK-GERVLASGSVQLPRFTLLESGSLLISPSHISDAGTYTCMA 464

Query: 107 SN--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--WVHN 162
           SN  G+ EA   S DL V A    T  P+  +  +    T  C  +  P   +   W  +
Sbjct: 465 SNSRGIDEA---SADLVVWARTRITNPPQDQSVIKGTKATMTCGVTHDPSVSVRFVWEKD 521

Query: 163 GKPI-SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAP 219
           G+ I +Q  P  R  V    + I      D G Y C  T+  G   ++ ++ V  L HAP
Sbjct: 522 GQVIVTQGLPRLRLDVN-GTLHISQTWSGDIGTYTCRVTSVGGNDSRNAHLRVRQLPHAP 580

Query: 220 EITEAPKDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTIL------ETGDL 272
           E   A     + + + + LT  + F    P + +I    E     +T+L      E+  +
Sbjct: 581 ENPSAVLS--STEKRAINLTWAKPFDGNSPLIRYILEVSE-NNAPWTVLLANIEPESTAV 637

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS--ATFRCN 330
            +  +  A S ++   A N +G  Q S      + T     PE+      Q+  A+ R N
Sbjct: 638 TVNGLIPARSYQFRLCAVNDVGKGQFS------KETDRVSLPEEPPSAPPQNVIASGRTN 691

Query: 331 AVSDPSLKLSIVW-----------LRG--------SEPIDFE----SEPRFVQSNDYSLT 367
                   + I W           LRG          P+D +    S P         L 
Sbjct: 692 Q------SIMIQWQPPPESHQNGILRGYIIRYRLTGLPVDIQYKNISNPDVTNLLLEDLI 745

Query: 368 VTKSSELDSGQYT-------CRAQTELDFIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKA 419
           +  + E++   Y        C   TE          T+Q VP  AP N    + +++   
Sbjct: 746 IWTNYEIEVAAYNGAGLGVYCHKVTEW---------TLQGVPTIAPGNVK-AEPVNSTTI 795

Query: 420 VVSWNPVSPQSLRGHFRGYKVQTWTE-KDGEGSIRELIVNKGESTTT-EVDKFVPASKNF 477
             +W   +PQ + G  +GYK+  W   K+ E ++  +  N  +S     +      S+ +
Sbjct: 796 RFTWTAPNPQFINGINQGYKLLAWEPGKEDETTVVTVRPNFQDSVHVGHIGGLKKFSEYY 855

Query: 478 ARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
             VL F    +GP S      T E  PG V  L    +  ++  + W +P + NGVL GY
Sbjct: 856 TSVLCFTTPGDGPRSSPRRLRTHEDTPGAVGHLSFTEILDTSLKVSWREPNEKNGVLTGY 915

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           +I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 916 RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQLS 967



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 104/278 (37%), Gaps = 37/278 (13%)

Query: 126 PYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
           PYF  EP       E   +   C A G    E  W+HN   I+       R     R  I
Sbjct: 13  PYFKTEPVPSQLHLERNRLVLTCMAEGSWPLEFKWIHNDTEIT-------RFSLEYRYLI 65

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RVF 243
            +L +S  G Y C   N +G + +      +A+     E  + +    G+  V+   R+ 
Sbjct: 66  PSLDRSHAGFYRCIVRNRVGALLQRRTEVQVAYMGSFEEGERTQAVSQGEGAVIPAPRIR 125

Query: 244 GAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSG-- 300
             P+P+V W  + +++    R  I     L I      D+G Y   A N       +G  
Sbjct: 126 CFPQPQVTWFRDGRKIPPSSRIAITLDNTLVILSTVAPDAGRYYVQAVNDKNGENKTGQH 185

Query: 301 -SLTVKE--------HTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVW-----LR 345
            +L+V+            I   P +  V +G S  T  C A + P +KLSI W     L 
Sbjct: 186 ITLSVENVGGPADPIAPTIVIPPRNTSVISGTSEVTMECVANARPLIKLSISWKKDGVLV 245

Query: 346 GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            S   DF          +  LTV   +  DSG Y C A
Sbjct: 246 RSGLSDF----------NRRLTVLSPAVSDSGFYECEA 273



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 6/145 (4%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW--TEKDGEGSIRELIV 457
            VP   P N  +IQ   A +  V+W+P   ++  G  +GYK+  W    K+    +R L +
Sbjct: 1609 VPTAPPQN-VIIQSATATQFDVTWDPPPLETQNGDIQGYKIFFWEYQRKNETEKLRTLFL 1667

Query: 458  NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS 517
             +G     ++      +     V AFN A +GP S      T +  P     +    L +
Sbjct: 1668 PEG---GVKLKNLTGYTTYMISVAAFNAAGDGPRSPPTRGRTQQAAPSAPSFIHFSELTT 1724

Query: 518  SAFYLKWVKPEQPNGVLMGYKIKYQ 542
            ++  + W +P  PNG++ GY++ Y+
Sbjct: 1725 TSVNVSWGEPVFPNGIIEGYRLIYE 1749



 Score = 46.2 bits (108), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 81/199 (40%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N +      +   +V W  V      G   GYKV  + EKD +  ++   V  
Sbjct: 1185 VPSCGPTNVSAFATTSSS-ILVRWFEVPEPDRNGLILGYKV-AYKEKDSDSPLQFWTVEG 1242

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-IISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1243 NASHSVQLTGLGKYVLYEIQVLAFTRIGDGRPSTPSILERTLDDVPGPPVVILFPEVRTT 1302

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P QPNG+++ Y+I Y+           + L    + +     + GL P + Y
Sbjct: 1303 SVRLIWQPPSQPNGIILAYQITYRLNSTNSNTATFDVL----NSSARQYTVTGLRPESVY 1358

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1359 VFRIRAQTRKGWGEAAEAL 1377



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 138/354 (38%), Gaps = 56/354 (15%)

Query: 379  YTCRAQTELDFIEAQATLTVQVPLEA---PSNFTLI--QVIDAKKAVVSWNP----VSPQ 429
            +  RAQT   + EA   L V     A   P++   +  + + A+  ++SW P    +SP 
Sbjct: 1360 FRIRAQTRKGWGEAAEALVVTTEKRARPQPTSRPTVPQENVQARSVLLSWEPGSDGLSP- 1418

Query: 430  SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
                  R Y VQ     +   ++    V+   S+   VD+  P +    RV A N   + 
Sbjct: 1419 -----IRYYTVQVRELPEKNWTVHSASVSHESSSYI-VDRLKPFTSYQFRVKATNDIGDS 1472

Query: 490  PPS-EIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVK 545
              S E  +  T +  P    + L   P  +++  + W  P  E+ NG+L+G++I+Y+ + 
Sbjct: 1473 DYSQESEAITTLQDAPDESPTILTVTPHTTTSVLICWQPPPEEKINGILLGFRIRYREL- 1531

Query: 546  GTKVGPLLERL--------------------PY----ISDPTTTSAKLAGLEPSTKYRIH 581
                  L +RL                    PY    +S+P+ T  +L  L    +Y I 
Sbjct: 1532 ------LYDRLRSFSVHTISSASASWAELTSPYSMRNLSEPSLTQYELDNLLKHKRYEIR 1585

Query: 582  LAGYTKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
            ++ Y   G+G  S  + +F    VP   P NV  + +T     ++W   P    N     
Sbjct: 1586 MSVYNAVGEGPTSSPQEVFVGEAVPTAPPQNVIIQSATATQFDVTWDPPPLETQNGDIQG 1645

Query: 637  YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGS 690
            Y+IF+  +       +   L   +  + L N   +  Y I V       DG  S
Sbjct: 1646 YKIFFWEYQRKNETEKLRTLFLPEGGVKLKNLTGYTTYMISVAAFNAAGDGPRS 1699



 Score = 38.9 bits (89), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 68/310 (21%), Positives = 127/310 (40%), Gaps = 52/310 (16%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q +L    + +T++  VP E P   T + + +          
Sbjct: 945  LTALTTYTIEVAAMTSKGQGQL----SSSTISSGVPPELPGPPTNLAISN---------- 990

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
            + P+++   F+ GY  +T    W  +   G I E    ++V    N+ ++ + EV    P
Sbjct: 991  IGPRTVTLQFKPGYDGKTSISRWQVEAQVGVIGENEDWVMVHQRANEPDARSLEVSGLNP 1050

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+WV  
Sbjct: 1051 YTFYRFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTA---SETSLWLRWVPL 1107

Query: 527  PE-----QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIH 581
            PE      P+ V  GY+++Y S  G     LL     I+D       +  LE  T+Y + 
Sbjct: 1108 PEWEYNGNPDSV--GYRVQY-SRTGAPSKALLH---VIADRLEREFTIEDLEEWTEYEVR 1161

Query: 582  LAGYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
            +      G G  S+ +       VP   P NV    +T +++++ W  +PE + N     
Sbjct: 1162 VQAINGIGAGPWSQPVRGRTRESVPSCGPTNVSAFATTSSSILVRWFEVPEPDRNGLILG 1221

Query: 637  YRIFWRRHNT 646
            Y++ ++  ++
Sbjct: 1222 YKVAYKEKDS 1231


>gi|351711148|gb|EHB14067.1| Neurofascin [Heterocephalus glaber]
          Length = 1343

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 134/372 (36%), Positives = 189/372 (50%), Gaps = 8/372 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 253 TSSSQMVLRGMDLLLECIASGVPTPGIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 311

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 312 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 370

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 371 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQVSSRAVYQCNTSNEHGYLLANAFVSVLDVP 430

Query: 219 PEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKIT 275
           P +  A      V       L C  FG+P P + W  N +   L GG Y + E G L+I 
Sbjct: 431 PRMLSARNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIK 490

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
            +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    DP
Sbjct: 491 MIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIFRMPEDQVAKRGTTVQLECRVKHDP 550

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
           SL+L++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A 
Sbjct: 551 SLRLTVTWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAH 607

Query: 396 LTVQVPLEAPSN 407
           LTV      P+N
Sbjct: 608 LTVLDDQATPTN 619



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 155/667 (23%), Positives = 262/667 (39%), Gaps = 79/667 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 168 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 226

Query: 113 AKSYSIDLSVLAA-----PYFTVEPEFINAAEE----ETVTFECKASGLPEPEIHWVHNG 163
              +++ +          P F + P+  ++++       +  EC ASG+P P I W   G
Sbjct: 227 KNPFTLKVLTTRGVAERTPSF-MYPQGTSSSQMVLRGMDLLLECIASGVPTPGIAWYKKG 285

Query: 164 KPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
             +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP   
Sbjct: 286 GDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYWL 341

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDV 277
           + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D 
Sbjct: 342 DEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRDT 399

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKE--HTHITDQPEDYEVEAGQSATFRCNAVSDP 335
             +    Y C   N+ G    +  ++V +     ++ + +   V         C     P
Sbjct: 400 QVSSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSARNQLIRVILYNRTRLDCPFFGSP 459

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
              L   W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  
Sbjct: 460 IPTLR--WFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVR 516

Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIRE 454
           L V+ P      F + +   AK+       V  +    H    ++  TW + D    I  
Sbjct: 517 LEVKDPTRI---FRMPEDQVAKRGTT----VQLECRVKHDPSLRLTVTWLKDDEPLYIGN 569

Query: 455 LIVNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
            +  + +S T                 TE+D+ +  +K    VL        P + + + 
Sbjct: 570 RMKKEDDSLTIFGVAERDQGSYTCVASTELDQDL--AKAHLTVLDDQAT---PTNRLAAL 624

Query: 498 VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLP 557
             P+G P   + LE   L   +  L W+  E  N  +  Y ++++  +  + G   +   
Sbjct: 625 --PKGRPDRPRDLELTDLAERSVRLTWIPGEDNNSPITEYVVQFEEDQ-FQPGVWHDHSK 681

Query: 558 YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGR 611
           +   P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G 
Sbjct: 682 F---PGSVNSAVLQLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGE 738

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
           G+  NN+ I+WT M       P+ +Y + WRR    E WN  +V  W  S  V+   P +
Sbjct: 739 GTRKNNMEITWTPMNATSAFGPNLRYIVKWRRREARETWN--NVTVW-GSRYVVGQTPVY 795

Query: 672 QPYEIKV 678
            PYEI+V
Sbjct: 796 VPYEIRV 802



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 97/225 (43%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP++   ++V+++    + WN V   +++
Sbjct: 798  YEIRVQAENDFGKGPEPNTVIGYSGEDYPRAAPTDVK-VRVMNSTAIGLQWNRVYSDTVQ 856

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     S+     R+      + T   V    P S     ++  NG  
Sbjct: 857  GQLREYRAYYWRESSLLKSLWVSQKRQQASFPSDRTRGVVGHLFPYSNYRLEMVVVNGRG 916

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L GY +KY    GT
Sbjct: 917  DGPRSETKEFTTPEGVPSAPRRFRVRQPTLETVTLEWDHPEHPNGILTGYTLKYVPFNGT 976

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 977  KLGKQIVENF----SPNQTKFLVQRSDPVSRYRFTLSARTQVGSG 1017



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 120/296 (40%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 58  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 117

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 118 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 177

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T 
Sbjct: 178 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 237

Query: 310 --ITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             + ++   +    G S++            C A   P+    I W +     D  S+  
Sbjct: 238 RGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PGIAWYKKGG--DLPSDKA 293

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 294 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 349



 Score = 47.4 bits (111), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++  
Sbjct: 36  NELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 95

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
                + D           GEY CFARNK GTA     L+ +    ++  P    E+ + 
Sbjct: 96  RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 150

Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 151 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 206

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
           D    Y+C A+      I+ +   T++V
Sbjct: 207 DMQTDYSCNARFHFTHTIQQKNPFTLKV 234


>gi|332248120|ref|XP_003273210.1| PREDICTED: neurofascin-like isoform 2 [Nomascus leucogenys]
          Length = 715

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 132/364 (36%), Positives = 190/364 (52%), Gaps = 10/364 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 348 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 406

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 407 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 465

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 466 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 525

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 526 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 584

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 585 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 644

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 645 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 701

Query: 395 TLTV 398
            LTV
Sbjct: 702 YLTV 705



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 143/365 (39%), Gaps = 32/365 (8%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 263 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 321

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 322 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 379

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 380 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 435

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 436 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 493

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 494 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 553

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 554 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 612

Query: 397 TVQVP 401
            V+ P
Sbjct: 613 EVKDP 617



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 19/210 (9%)

Query: 15  ILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI 74
           +L N   + +       +P+ Q +     V L N+   L C F G+P+P   W K+G   
Sbjct: 513 LLANAFVSVLDVPPRMLSPRNQLI----RVILYNR-TRLDCPFFGSPIPTLRWFKNGQGS 567

Query: 75  NPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV 130
           N    +  GNY      SL IK +   DQG YTC  +N +G+A++  + L V        
Sbjct: 568 N----LDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAEN-QVRLEVKDPTRIYR 622

Query: 131 EPEFINAAEEETVTFECKASGLPEPE--IHWVHNGKPISQAPPNPRRKVGPNRITIENLR 188
            PE   A    TV  EC+    P  +  + W+ + +P+       R K   + +TI  + 
Sbjct: 623 MPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN---RMKKEDDSLTIFGVA 679

Query: 189 KSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           + D G+Y C A+  L       Y+ VL + 
Sbjct: 680 ERDQGSYTCVASTELDQDLAKAYLTVLGNC 709



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 117/297 (39%), Gaps = 30/297 (10%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGN 194
            + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G 
Sbjct: 152 RDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGE 211

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNW 252
           Y C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W
Sbjct: 212 YQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFW 271

Query: 253 IHNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK--- 305
           + +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K   
Sbjct: 272 MSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLT 331

Query: 306 -----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
                E T     P+       V  G      C A   P+    I W +     D  S+ 
Sbjct: 332 TRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDK 387

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
              ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 388 AKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 444



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 29/206 (14%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 133 LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 192

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 193 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 247

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 248 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 303

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQV 400
              Y+C A+      I+ +   T++V
Sbjct: 304 QTDYSCNARFHFTHTIQQKNPFTLKV 329


>gi|380798931|gb|AFE71341.1| neuronal cell adhesion molecule isoform A precursor, partial
           [Macaca mulatta]
          Length = 1278

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 139/394 (35%), Positives = 199/394 (50%), Gaps = 21/394 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  + P +R    N+ K+L I HV  +D G+Y C
Sbjct: 257 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIIHVSEADSGNYQC 314

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+   P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 315 IAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 373

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 374 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 433

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       
Sbjct: 434 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 493

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L L++
Sbjct: 494 TGTYTCVARNKLGMAKNEVHLEIKDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTV 553

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  S+ RF    D+ L +   S+ DSG YTC A T LD + A A L+V  P
Sbjct: 554 LWLKDNR--ELPSDERFTVDKDH-LVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAP 610

Query: 402 LEAPS----------NFTLIQVIDAKKAVVSWNP 425
              P+          +  L   +D K   +SW P
Sbjct: 611 TPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWTP 643



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 147/565 (26%), Positives = 238/565 (42%), Gaps = 60/565 (10%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W    K     P N  R V  N    + I ++ ++D+GNY C A
Sbjct: 262 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 316

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK-- 257
            N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 317 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 375

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N+ G    +  + V         P +
Sbjct: 376 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPAN 435

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + + 
Sbjct: 436 TLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKD 492

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
            +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q    + ++VS+       +
Sbjct: 493 STGTYTCVARNKLGMAKNEVHLEIKDPTWIIKQPE-YAVVQ----RGSMVSFE----CKV 543

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG-- 489
           +  +       W + +     REL  +  E  T + D  V A  +      +    N   
Sbjct: 544 KHDYTLTLTVLWLKDN-----RELPSD--ERFTVDKDHLVIADVSDNDSGTYTCVANTTL 596

Query: 490 ---PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKI 539
                S ++S V P   P  V  +   P           +  L W   +  N  +  + I
Sbjct: 597 DSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFII 656

Query: 540 KYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESK 595
           +Y+    T   P L         T T+A+L  L P   Y   +      G      A  +
Sbjct: 657 EYED---TMHEPGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNSIGKSLPSEASEQ 712

Query: 596 YLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQD 653
           YL     P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W   
Sbjct: 713 YLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS- 771

Query: 654 DVLDWRQSELVLANQPTFQPYEIKV 678
            V+    S+ +++  PTF PY IKV
Sbjct: 772 -VVVANVSKYIVSGTPTFVPYLIKV 795



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 818  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 876

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 877  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 936

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 937  PTLDSLTLEWHPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIP----ANKTRWTLKNL 992

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 993  NFSTRYKFYFYAQTSAGSGSQ 1013



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 138/605 (22%), Positives = 225/605 (37%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 354 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 409

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 410 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 467

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 468 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIIKQ 525

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ + +EL       ++   L I DV+  DS
Sbjct: 526 PEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKDNRELPSDERFTVDKDHLVIADVSDNDS 585

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L +   S  L+V     +   P    V    +  F           + + 
Sbjct: 586 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 640

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +   +      S    + Q          F + A  +
Sbjct: 641 WTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 700

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 701 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 759

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 760 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAVVMGHSGE 816

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+ 
Sbjct: 817 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 876

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A    +F  P       EG  S P
Sbjct: 877 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 929

Query: 616 NNLVI 620
           ++L I
Sbjct: 930 SSLKI 934



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 126/315 (40%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 36  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 91

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 92  EGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 151

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 152 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 211

Query: 306 E------HTHITDQPEDYEVEAGQSATFR--------CNAVSDPSLKLSIVWLRG----- 346
                  +  I     D E    +S+  R         NA +   L+ +++ L       
Sbjct: 212 VISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGL 271

Query: 347 SEPIDFESEP-------RFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             PI + ++        R V  N + +L +   SE DSG Y C A+  L  I    ++ V
Sbjct: 272 PTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRV 331

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 332 KAAPYWITAPQNLVL 346


>gi|344277018|ref|XP_003410302.1| PREDICTED: neurofascin-like isoform 3 [Loxodonta africana]
          Length = 1239

 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 133/373 (35%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PS +    N+ K+L I ++   D
Sbjct: 252 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSHKAKFENFNKALRITNISEED 310

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 311 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 369

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 370 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 429

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 430 PRML-SPRNQLMRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 488

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED  V+ G +    C    D
Sbjct: 489 KMIRKEDKGIYTCVATNILGKAENQVHLEVKDPTRIYQMPEDQVVKRGTTVQLPCRVKHD 548

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 549 PSLKLTVSWLKDDEPLYVGNR---MKKEDDSLTIFGVAERDQGSYTCIASTELDQDLAKA 605

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 606 HLTVLADQATPTN 618



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 152/666 (22%), Positives = 260/666 (39%), Gaps = 77/666 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 167 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 225

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 226 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 283

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 284 GGDL---PSHKAKFENFNKALRITNISEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 339

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 340 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 397

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 398 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLMRVILYNRTRLDCPFFGS 457

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 458 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDKGIYTCVATNILGKAENQVHL 516

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIREL 455
            V+ P       T I  +   + V     V       H    K+  +W + D    +   
Sbjct: 517 EVKDP-------TRIYQMPEDQVVKRGTTVQLPCRVKHDPSLKLTVSWLKDDEPLYVGNR 569

Query: 456 IVNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
           +  + +S T                 TE+D+ +  +K    VLA        P+  ++ +
Sbjct: 570 MKKEDDSLTIFGVAERDQGSYTCIASTELDQDL--AKAHLTVLADQAT----PTNRLALL 623

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
            P+G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   +
Sbjct: 624 -PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKF 681

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRG 612
              P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G
Sbjct: 682 ---PGSVNSAVLQLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAAPESNPADVKGEG 738

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
           +  NN+ I+WT M       P+ +Y + WRR  T + WN  +V  W  S  V+   P + 
Sbjct: 739 TRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRDTWN--NVTVW-GSRYVVGQTPVYV 795

Query: 673 PYEIKV 678
           PYEI+V
Sbjct: 796 PYEIRV 801



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 9/172 (5%)

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           ++W P++  S  G    Y V+ W  ++   +   + V        +   +VP      RV
Sbjct: 746 ITWTPMNATSAFGPNLRYIVK-WRRRETRDTWNNVTVWGSRYVVGQTPVYVPYE---IRV 801

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
            A N    GP  + +   + E +P   +             L+W  PE PNG+L+GY +K
Sbjct: 802 QAENDFGKGPEPDTVIGYSGEDLPSAPRRFRVRQPNLQTINLEWDHPEHPNGILIGYTLK 861

Query: 541 YQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           Y +  GTKVG  ++E       P  T   +   +P ++YR  L+  T+ G+G
Sbjct: 862 YVAFNGTKVGKQIVENFA----PNQTKFTVPRADPVSRYRFTLSARTQVGNG 909



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 115/297 (38%), Gaps = 32/297 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPPNP----RRKVGPNRITIENLRKSD--TGN 194
           + +  EC+A G P P  HW  N +  + A  +P    RR+ G   I   +  + +   G 
Sbjct: 57  DNILIECEAKGEPCPSFHWTRNSRFFNVA-KDPRVSMRRRSGTLVIDFRSGGRPEEYEGE 115

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNW 252
           Y C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W
Sbjct: 116 YQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFW 175

Query: 253 IHNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK--- 305
           + +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K   
Sbjct: 176 MSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLT 235

Query: 306 -----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
                E T     P+       V  G      C A   P+    I W +     D  S  
Sbjct: 236 TRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSHK 291

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
              ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 292 AKFENFNKALRITNISEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 348



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 84/208 (40%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L+  P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++  
Sbjct: 35  NELSQPPTITKQSVKDHIVDPRDNILIECEAKGEPCPSFHWTRNSRFFNVAKDPRVSMRR 94

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------ED 316
                + D           GEY CFARNK GTA     L+ +    ++  P       + 
Sbjct: 95  RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 149

Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 150 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 205

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
           D    Y+C A+      I+ +   T++V
Sbjct: 206 DMQTDYSCNARFHFTHTIQQKNPFTLKV 233


>gi|119611930|gb|EAW91524.1| hCG16415, isoform CRA_a [Homo sapiens]
          Length = 690

 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 132/364 (36%), Positives = 189/364 (51%), Gaps = 10/364 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 323 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 381

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 382 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 440

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 441 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 500

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 501 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 559

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED     G +    C    D
Sbjct: 560 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHD 619

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 620 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 676

Query: 395 TLTV 398
            LTV
Sbjct: 677 YLTV 680



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 143/365 (39%), Gaps = 32/365 (8%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 238 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 296

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 297 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 354

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 355 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 410

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 411 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 468

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 469 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 528

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 529 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 587

Query: 397 TVQVP 401
            V+ P
Sbjct: 588 EVKDP 592



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 19/211 (9%)

Query: 15  ILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI 74
           +L N   + +       +P+ Q +     V L N+   L C F G+P+P   W K+G   
Sbjct: 488 LLANAFVSVLDVPPRMLSPRNQLI----RVILYNR-TRLDCPFFGSPIPTLRWFKNGQGS 542

Query: 75  NPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV 130
           N    +  GNY      SL IK +   DQG YTC  +N +G+A++  + L V        
Sbjct: 543 N----LDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAEN-QVRLEVKDPTRIYR 597

Query: 131 EPEFINAAEEETVTFECKASGLPEPE--IHWVHNGKPISQAPPNPRRKVGPNRITIENLR 188
            PE   A    TV  EC+    P  +  + W+ + +P+       R K   + +TI  + 
Sbjct: 598 MPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN---RMKKEDDSLTIFGVA 654

Query: 189 KSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
           + D G+Y C A+  L       Y+ VL + P
Sbjct: 655 ERDQGSYTCVASTELDQDLAKAYLTVLGNCP 685



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 117/297 (39%), Gaps = 30/297 (10%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGN 194
            + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G 
Sbjct: 127 RDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGE 186

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNW 252
           Y C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W
Sbjct: 187 YQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFW 246

Query: 253 IHNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK--- 305
           + +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K   
Sbjct: 247 MSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLT 306

Query: 306 -----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
                E T     P+       V  G      C A   P+    I W +     D  S+ 
Sbjct: 307 TRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDK 362

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
              ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 363 AKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 419



 Score = 46.2 bits (108), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 29/206 (14%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 108 LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 167

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------EDYE 318
              + D           GEY CFARNK GTA     L+ +    ++  P       +   
Sbjct: 168 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 222

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 223 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 278

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQV 400
              Y+C A+      I+ +   T++V
Sbjct: 279 QTDYSCNARFHFTHTIQQKNPFTLKV 304


>gi|119611931|gb|EAW91525.1| hCG16415, isoform CRA_b [Homo sapiens]
          Length = 718

 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 132/364 (36%), Positives = 189/364 (51%), Gaps = 10/364 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 351 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 409

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 410 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 468

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 469 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 528

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 529 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 587

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED     G +    C    D
Sbjct: 588 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHD 647

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 648 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 704

Query: 395 TLTV 398
            LTV
Sbjct: 705 YLTV 708



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 143/365 (39%), Gaps = 32/365 (8%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 266 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 324

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 325 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 382

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 383 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 438

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 439 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 496

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 497 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 556

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 557 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 615

Query: 397 TVQVP 401
            V+ P
Sbjct: 616 EVKDP 620



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 19/211 (9%)

Query: 15  ILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI 74
           +L N   + +       +P+ Q +     V L N+   L C F G+P+P   W K+G   
Sbjct: 516 LLANAFVSVLDVPPRMLSPRNQLI----RVILYNR-TRLDCPFFGSPIPTLRWFKNGQGS 570

Query: 75  NPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV 130
           N    +  GNY      SL IK +   DQG YTC  +N +G+A++  + L V        
Sbjct: 571 N----LDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAEN-QVRLEVKDPTRIYR 625

Query: 131 EPEFINAAEEETVTFECKASGLPEPE--IHWVHNGKPISQAPPNPRRKVGPNRITIENLR 188
            PE   A    TV  EC+    P  +  + W+ + +P+       R K   + +TI  + 
Sbjct: 626 MPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN---RMKKEDDSLTIFGVA 682

Query: 189 KSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
           + D G+Y C A+  L       Y+ VL + P
Sbjct: 683 ERDQGSYTCVASTELDQDLAKAYLTVLGNCP 713



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 117/297 (39%), Gaps = 30/297 (10%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGN 194
            + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G 
Sbjct: 155 RDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGE 214

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNW 252
           Y C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W
Sbjct: 215 YQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFW 274

Query: 253 IHNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK--- 305
           + +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K   
Sbjct: 275 MSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLT 334

Query: 306 -----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
                E T     P+       V  G      C A   P+    I W +     D  S+ 
Sbjct: 335 TRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDK 390

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
              ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 391 AKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 447



 Score = 45.8 bits (107), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 29/206 (14%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 136 LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 195

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 196 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 250

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 251 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 306

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQV 400
              Y+C A+      I+ +   T++V
Sbjct: 307 QTDYSCNARFHFTHTIQQKNPFTLKV 332


>gi|344277014|ref|XP_003410300.1| PREDICTED: neurofascin-like isoform 1 [Loxodonta africana]
          Length = 1189

 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 133/373 (35%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PS +    N+ K+L I ++   D
Sbjct: 263 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSHKAKFENFNKALRITNISEED 321

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 322 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 380

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 381 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 440

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 441 PRML-SPRNQLMRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 499

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED  V+ G +    C    D
Sbjct: 500 KMIRKEDKGIYTCVATNILGKAENQVHLEVKDPTRIYQMPEDQVVKRGTTVQLPCRVKHD 559

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 560 PSLKLTVSWLKDDEPLYVGNR---MKKEDDSLTIFGVAERDQGSYTCIASTELDQDLAKA 616

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 617 HLTVLADQATPTN 629



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 157/682 (23%), Positives = 265/682 (38%), Gaps = 92/682 (13%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 220 KNPFTLKV-LTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLE 278

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 279 CIASGVPTPDIAWYKKGGDL---PSHKAKFENFNKALRITNISEEDSGEYFCLASNKMGS 335

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 336 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 394

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C   N+ G    +  ++V +       P +  + 
Sbjct: 395 PNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLMR 452

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 453 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDKGIYT 511

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
           C A   L   E Q  L V+ P       T I  +   + V     V       H    K+
Sbjct: 512 CVATNILGKAENQVHLEVKDP-------TRIYQMPEDQVVKRGTTVQLPCRVKHDPSLKL 564

Query: 441 Q-TWTEKDGEGSIRELIVNKGESTT-----------------TEVDKFVPASKNFARVLA 482
             +W + D    +   +  + +S T                 TE+D+ +  +K    VLA
Sbjct: 565 TVSWLKDDEPLYVGNRMKKEDDSLTIFGVAERDQGSYTCIASTELDQDL--AKAHLTVLA 622

Query: 483 FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
                   P+  ++ + P+G P   + LE   L   +  L W+  +  N  +  Y ++++
Sbjct: 623 DQAT----PTNRLALL-PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFE 677

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KY 596
             +  + G   +   +   P + ++ +  L P   Y+  +    + G    S      + 
Sbjct: 678 EDQ-FQPGVWHDHSKF---PGSVNSAVLQLSPYVNYQFRVIAINEVGSSHPSLPSERYRT 733

Query: 597 LFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVL 656
               P  NP +V+G G+  NN+ I+WT M       P+ +Y + WRR  T + WN  +V 
Sbjct: 734 SGAAPESNPADVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRDTWN--NVT 791

Query: 657 DWRQSELVLANQPTFQPYEIKV 678
            W  S  V+   P + PYEI+V
Sbjct: 792 VW-GSRYVVGQTPVYVPYEIRV 812



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 102/225 (45%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP++   I+V+++    + WN V   +++
Sbjct: 808  YEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVK-IRVLNSTAISLQWNRVYSDTVQ 866

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     ++     R+     G+ T   V +  P S     ++  NG  
Sbjct: 867  GQLREYRAYYWRESSLLKNLWVSQKRQQASFLGDRTRGVVARLFPYSNYKLEMVVVNGRG 926

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY +KY +  GT
Sbjct: 927  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLQTINLEWDHPEHPNGILIGYTLKYVAFNGT 986

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            KVG  ++E       P  T   +   +P ++YR  L+  T+ G+G
Sbjct: 987  KVGKQIVENFA----PNQTKFTVPRADPVSRYRFTLSARTQVGNG 1027



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 117/313 (37%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPP---NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +  + A     + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGEPCPSFHWTRNSRFFNVAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 230

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 231 HPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PD 288

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S     ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 289 IAWYKKGG--DLPSHKAKFENFNKALRITNISEEDSGEYFCLASNKMGSIRHTISVRVKA 346

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 347 APYWLDEPKNLIL 359



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 29/213 (13%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L+  P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LSQPPTITKQSVKDHIVDPRDNILIECEAKGEPCPSFHWTRNSRFFNVAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQVPLEAPSN 407
              Y+C A+      I+ +   T++V    P N
Sbjct: 202 QTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN 234


>gi|345307130|ref|XP_001507406.2| PREDICTED: neurofascin [Ornithorhynchus anatinus]
          Length = 1371

 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 131/373 (35%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + P+ ++   N+ K+L I +V   D
Sbjct: 445 TSSSQMVLRGTDLLLECIASGVPAPDIAWHKKGGDL-PAGKVKFENFNKALRIINVSEED 503

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 504 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRVVCRANGNPKPTVQ 562

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  A PNP R+V  + +   + +   +  Y CNA+N  GY+  + +V+VL   
Sbjct: 563 WLVNGEPLEAASPNPSREVAGDTVIFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVP 622

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +   P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 623 PRML-FPRNQLIKVIHLNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYRVFENGSLEI 681

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
           T     D G YTC A N LG A+    L VK+ T I   PED   + G +    C+   D
Sbjct: 682 TMTRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIVQVPEDQMAKKGATVRLECHVKHD 741

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKLSI WL+ +EP+   +    ++  D +LT+   +E D G Y C A TELD   A+A
Sbjct: 742 PSLKLSIKWLKDNEPLYIGNR---LKKEDEALTILGVAERDEGLYACEASTELDRAVAKA 798

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 799 YLTVLATQSVPTN 811



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 160/667 (23%), Positives = 271/667 (40%), Gaps = 79/667 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG  G  L   +V   D Q  Y+C      ++ + +
Sbjct: 360 GLPSPVIFWMSSSMDPIVQDKRVSQGQNG-DLYFSNVMLQDTQTDYSCNARFHFTHTIQQ 418

Query: 113 AKSYSIDLSVLAA-----PYFTVEPEFINAAEE----ETVTFECKASGLPEPEIHWVHNG 163
              +++ +          P F + P+  ++++       +  EC ASG+P P+I W   G
Sbjct: 419 KNPFTLKVLTTRGVAERTPSF-MHPQGTSSSQMVLRGTDLLLECIASGVPAPDIAWHKKG 477

Query: 164 KPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
             +   P    +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP   
Sbjct: 478 GDL---PAGKVKFENFNKALRIINVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYWL 533

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE--TGDLKI-TDVAF 279
           + PK+     G+   + CR  G PKP V W+ N + L            GD  I  D   
Sbjct: 534 DEPKNLILAPGEDGRVVCRANGNPKPTVQWLVNGEPLEAASPNPSREVAGDTVIFRDTQI 593

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
             S  Y C A N+ G    +  ++V +       P +  ++       R +     S   
Sbjct: 594 GSSAVYQCNASNEHGYLLANAFVSVLDVPPRMLFPRNQLIKVIHLNRTRLDCPFFGSPIP 653

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           ++ W +  +  + +     V  N  SL +T + + D G YTC A   L   E Q  L V+
Sbjct: 654 TLRWFKNGQGSNLDGGNYRVFENG-SLEITMTRKEDQGIYTCVATNILGKAENQVRLEVK 712

Query: 400 VPLEAPSNFTLIQVID---AKKAV-------VSWNPVSPQSLRGHFRGYK------VQTW 443
            P        ++QV +   AKK         V  +P    SL+   +  K      +   
Sbjct: 713 DPTR------IVQVPEDQMAKKGATVRLECHVKHDP----SLKLSIKWLKDNEPLYIGNR 762

Query: 444 TEKDGEGSIRELIVNKGES-----TTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
            +K+ E      +  + E       +TE+D+ V  +K +  VLA        P+  ++ V
Sbjct: 763 LKKEDEALTILGVAERDEGLYACEASTELDRAV--AKAYLTVLATQSV----PTNRMA-V 815

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP-LLERLP 557
            P+  P   + LE   L   +  L W+  +  N  +  Y ++++     +  P     L 
Sbjct: 816 LPKERPERPRDLELTDLAERSVRLTWIPGDDNNSPITDYIVQFEE---DQFQPGRWHNLS 872

Query: 558 YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGR 611
             S   + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G 
Sbjct: 873 KFSG--SINSAVLKLSPYVNYQFRVIAINEVGSSLPSLPSERYRTSGAPPEANPSDVQGV 930

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
           GS  NN+ ISWT M   +   P+ +Y + WRR +T E+W+   V   + +  V+   P +
Sbjct: 931 GSRKNNMEISWTPMNATQAYGPNLRYIVKWRRRDTRESWSNATV---KGNRYVVWQTPVY 987

Query: 672 QPYEIKV 678
            PY+I+V
Sbjct: 988 VPYDIRV 994



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 150/629 (23%), Positives = 238/629 (37%), Gaps = 81/629 (12%)

Query: 15   ILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI 74
            +L N   + +        P+ Q +       +   +  L C F G+P+P   W K+G   
Sbjct: 610  LLANAFVSVLDVPPRMLFPRNQLIK-----VIHLNRTRLDCPFFGSPIPTLRWFKNGQGS 664

Query: 75   NPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV 130
            N    +  GNY      SL I      DQG YTC  +N +G+A++  + L V        
Sbjct: 665  N----LDGGNYRVFENGSLEITMTRKEDQGIYTCVATNILGKAEN-QVRLEVKDPTRIVQ 719

Query: 131  EPEFINAAEEETVTFECKASGLPEPE--IHWVHNGKPISQAPPNPRRKVGPNRITIENLR 188
             PE   A +  TV  EC     P  +  I W+ + +P+       R K     +TI  + 
Sbjct: 720  VPEDQMAKKGATVRLECHVKHDPSLKLSIKWLKDNEPLYIGN---RLKKEDEALTILGVA 776

Query: 189  KSDTGNYGCNATNSLGYVYKDVYVNV----------LAHAP-EITEAPKDEYTVDGKTVV 237
            + D G Y C A+  L       Y+ V          +A  P E  E P+D    D     
Sbjct: 777  ERDEGLYACEASTELDRAVAKAYLTVLATQSVPTNRMAVLPKERPERPRDLELTD--LAE 834

Query: 238  LTCRVFGAP-----KPEVNWI--HNQKELTGGRYTILETGDLKITDVAFADSG----EYT 286
             + R+   P      P  ++I    + +   GR+  L      I       S     ++ 
Sbjct: 835  RSVRLTWIPGDDNNSPITDYIVQFEEDQFQPGRWHNLSKFSGSINSAVLKLSPYVNYQFR 894

Query: 287  CFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVS------------D 334
              A N++G++  S      E    +  P +      Q    R N +              
Sbjct: 895  VIAINEVGSSLPS---LPSERYRTSGAPPEANPSDVQGVGSRKNNMEISWTPMNATQAYG 951

Query: 335  PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
            P+L+  + W R      + +    V+ N Y +  T         Y  R Q+E DF +   
Sbjct: 952  PNLRYIVKWRRRDTRESWSNA--TVKGNRYVVWQTPVYV----PYDIRVQSENDFGKGPD 1005

Query: 395  TLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
              T+        P +AP     ++V+++    + WN V P +++G  + Y+   W E   
Sbjct: 1006 PDTILGYSGEDYP-KAPPTEVKVRVLNSTAVSLQWNRVYPDTVQGQLKEYRAYFWRESSL 1064

Query: 449  EGSIR-----ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGV 503
               +R     +     G+     V    P S     ++  NG  +GP SE+  F TPEGV
Sbjct: 1065 LKHLRVSPKKQWTSFPGDRLRGVVSGLYPYSNYQLEMVVVNGRGDGPRSEVREFTTPEGV 1124

Query: 504  PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVG-PLLERLPYISDP 562
            P   ++            LKW     PNG+L GY +KY +  G+K G PL+E       P
Sbjct: 1125 PSAPRNFRVRQPNLQTIILKWDHRSTPNGILTGYHLKYLAFNGSKTGKPLVESF----SP 1180

Query: 563  TTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
              T   +   +P ++YR  L+  T+ G G
Sbjct: 1181 NQTKFSITRADPVSRYRFTLSAKTQVGLG 1209



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 156/646 (24%), Positives = 244/646 (37%), Gaps = 87/646 (13%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            + C   G P P   W  +G P+     NPS  ++    G ++I +  +      Y C  S
Sbjct: 549  VVCRANGNPKPTVQWLVNGEPLEAASPNPSREVA----GDTVIFRDTQIGSSAVYQCNAS 604

Query: 108  NGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            N  G   + +  +SVL  P   + P  + I          +C   G P P + W  NG+ 
Sbjct: 605  NEHGYLLANAF-VSVLDVPPRMLFPRNQLIKVIHLNRTRLDCPFFGSPIPTLRWFKNGQG 663

Query: 166  ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
             +    N  R      + I   RK D G Y C ATN LG     V + V      I + P
Sbjct: 664  SNLDGGN-YRVFENGSLEITMTRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIVQVP 721

Query: 226  KDEYTVDGKTVVLTCRVFGAP--KPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSG 283
            +D+    G TV L C V   P  K  + W+ + + L  G     E   L I  VA  D G
Sbjct: 722  EDQMAKKGATVRLECHVKHDPSLKLSIKWLKDNEPLYIGNRLKKEDEALTILGVAERDEG 781

Query: 284  EYTCFARNKLGTAQGSGSLTVKEHTHIT------------DQPEDYEVEAGQSATFRCNA 331
             Y C A  +L  A     LTV     +             ++P D E+            
Sbjct: 782  LYACEASTELDRAVAKAYLTVLATQSVPTNRMAVLPKERPERPRDLEL----------TD 831

Query: 332  VSDPSLKLSIVWLRGSE---PI-----DFESEPRFVQSNDYSLT---------VTKSSEL 374
            +++ S++L+  W+ G +   PI      FE E +F     ++L+         V K S  
Sbjct: 832  LAERSVRLT--WIPGDDNNSPITDYIVQFE-EDQFQPGRWHNLSKFSGSINSAVLKLSPY 888

Query: 375  DSGQYTCRAQTE----LDFIEAQATLTVQVPLEAPSNFTLIQVIDAKK--AVVSWNPVSP 428
             + Q+   A  E    L  + ++   T   P EA  N + +Q + ++K    +SW P++ 
Sbjct: 889  VNYQFRVIAINEVGSSLPSLPSERYRTSGAPPEA--NPSDVQGVGSRKNNMEISWTPMNA 946

Query: 429  QSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
                G    Y V+ W  +D   S     V        +   +VP      RV + N    
Sbjct: 947  TQAYGPNLRYIVK-WRRRDTRESWSNATVKGNRYVVWQTPVYVPYD---IRVQSENDFGK 1002

Query: 489  GPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKY---- 541
            GP  + I   + E  P    + ++   L S+A  L+W  V P+   G L  Y+  +    
Sbjct: 1003 GPDPDTILGYSGEDYPKAPPTEVKVRVLNSTAVSLQWNRVYPDTVQGQLKEYRAYFWRES 1062

Query: 542  QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-- 599
              +K  +V P  +   +  D       ++GL P + Y++ +      GDG  S+   +  
Sbjct: 1063 SLLKHLRVSPKKQWTSFPGD--RLRGVVSGLYPYSNYQLEMVVVNGRGDGPRSEVREFTT 1120

Query: 600  ---VPFKNPDNVEGRGSTPNNLVISWT--AMPEIEHNAPHFKYRIF 640
               VP   P N   R      +++ W   + P       H KY  F
Sbjct: 1121 PEGVP-SAPRNFRVRQPNLQTIILKWDHRSTPNGILTGYHLKYLAF 1165



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 117/297 (39%), Gaps = 32/297 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPPNPR----RKVGPNRITIENLRKSD--TGN 194
           + +  EC+A G P P   W  N K  + A  +PR    R+ G   I   +  + +   G 
Sbjct: 250 DNIFIECEAKGNPFPSFLWTRNSKFFNIA-KDPRVTMQRRSGTLVIDFRSGGRPEEYEGE 308

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNW 252
           Y C+A N+LG    +     ++ +P   +   D   V +G  + L C    G P P + W
Sbjct: 309 YQCSARNNLGTALSNKIRLQVSKSPLWPKESLDPVVVQEGNPLTLQCNPPPGLPSPVIFW 368

Query: 253 IHNQKE--LTGGRYTILETGDLKITDVAFADS-GEYTCFARNKL-GTAQGSGSLTVKEHT 308
           + +  +  +   R +  + GDL  ++V   D+  +Y+C AR     T Q     T+K  T
Sbjct: 369 MSSSMDPIVQDKRVSQGQNGDLYFSNVMLQDTQTDYSCNARFHFTHTIQQKNPFTLKVLT 428

Query: 309 ------------HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
                       H         V  G      C A   P+    I W +     D  +  
Sbjct: 429 TRGVAERTPSFMHPQGTSSSQMVLRGTDLLLECIASGVPA--PDIAWHKKGG--DLPAGK 484

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
              ++ + +L +   SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 485 VKFENFNKALRIINVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 541



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 83/210 (39%), Gaps = 31/210 (14%)

Query: 212 VNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTIL 267
           +  +   P IT+    +Y VD +  + + C   G P P   W  N K        R T+ 
Sbjct: 227 IPTVLQPPTITKQSVKDYIVDPRDNIFIECEAKGNPFPSFLWTRNSKFFNIAKDPRVTMQ 286

Query: 268 ETGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------E 315
                 + D           GEY C ARN LGTA     L+ K    ++  P       +
Sbjct: 287 RRSGTLVIDFRSGGRPEEYEGEYQCSARNNLGTA-----LSNKIRLQVSKSPLWPKESLD 341

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSND--YSLTVTKS 371
              V+ G   T +CN    P L   ++ W+  S +PI  +      Q+ D  +S  + + 
Sbjct: 342 PVVVQEGNPLTLQCNP--PPGLPSPVIFWMSSSMDPIVQDKRVSQGQNGDLYFSNVMLQD 399

Query: 372 SELDSGQYTCRAQTELDF-IEAQATLTVQV 400
           ++ D   Y+C A+      I+ +   T++V
Sbjct: 400 TQTD---YSCNARFHFTHTIQQKNPFTLKV 426


>gi|410952026|ref|XP_003982690.1| PREDICTED: neuronal cell adhesion molecule isoform 1 [Felis catus]
          Length = 1184

 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 168/537 (31%), Positives = 247/537 (45%), Gaps = 29/537 (5%)

Query: 25  SASQNRHAPKQQYV----TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRI 80
           SA  NR  P         T  KE  LR   + L CI  G P P   W K+   + P++R 
Sbjct: 253 SAKPNRERPPTFLTPEGNTSNKE-ELRGNVLSLECIAEGLPTPVIYWIKEDGTL-PTNRT 310

Query: 81  SQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEE 140
              N+ K+L I  V  +D G+Y C   N +G A  ++I ++V AAPY+ + P+ +  +  
Sbjct: 311 FYRNFKKTLQIIQVSEADSGNYQCIAKNALG-AIHHTISVTVKAAPYWILAPQNLVLSPG 369

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
           E  +  C+A+G P+P I W+ NG PI  AP +P RK+  + I   N+++  +  Y CNA+
Sbjct: 370 EDGSLICRANGNPKPRISWLSNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNAS 429

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK-- 257
           N  GY+  + +VNVLA  P I  +    Y V   +  +L C  FG+P P + W    K  
Sbjct: 430 NEYGYLLANAFVNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGS 489

Query: 258 ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDY 317
            L    Y + E G L+I       +G YTC ARNKLG A+    L +K+ T I  QPE  
Sbjct: 490 ALRDDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQPEYA 549

Query: 318 EVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSG 377
            V+ G + +F C    D +L L+I WL+ +   +  S+ RF    D+ L V    + D G
Sbjct: 550 VVQRGSTVSFECKVKHDHTLTLTITWLKDNG--ELPSDGRFTVDKDH-LEVADVRDSDGG 606

Query: 378 QYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRG 437
            YTC A T LD + A A L+V      P +  L   +D K   +SW P    +       
Sbjct: 607 AYTCVANTTLDMVSASAVLSVVDVPNPPFDLELTDQLD-KSVQLSWTPGDDNN--SPITK 663

Query: 438 YKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE---- 493
           + ++        G         G  TT ++ K  P      RV+A N      PSE    
Sbjct: 664 FIIEYEDAMHEAGLWHHQTEVSGTQTTAQL-KLSPYVNYSFRVMAVNSLGRSLPSEPSEQ 722

Query: 494 -IISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
            +     P+  P  V+ L + P       + W KP    + NG  + YK+ ++   G
Sbjct: 723 YLTKAAEPDTNPTAVEGLGSEP---DNLVITW-KPLNGFESNGPGLQYKVSWRQKDG 775



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 143/591 (24%), Positives = 243/591 (41%), Gaps = 70/591 (11%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
            + N+   L C F G+PLP   W K        D I   +   +L I   +    G+YTC 
Sbjct: 461  IANRPALLDCAFFGSPLPTIEWFKGAKGSALRDDIYVLHENGTLEIPVAQKDSTGTYTCV 520

Query: 106  VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEIHWVHNG 163
              N +G AK+  + L +        +PE+       TV+FECK          I W+ + 
Sbjct: 521  ARNKLGMAKN-EVHLEIKDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTLTITWLKDN 579

Query: 164  KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--------- 214
                + P + R  V  + + + ++R SD G Y C A  +L  V     ++V         
Sbjct: 580  ---GELPSDGRFTVDKDHLEVADVRDSDGGAYTCVANTTLDMVSASAVLSVVDVPNPPFD 636

Query: 215  ------LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE 268
                  L  + +++  P D+        ++    +     E    H+Q E++G +     
Sbjct: 637  LELTDQLDKSVQLSWTPGDDNNSPITKFIIE---YEDAMHEAGLWHHQTEVSGTQ----T 689

Query: 269  TGDLKITDVAFADSGEYTCFARNKLGTAQGSG------SLTVKEHTHIT------DQPED 316
            T  LK++      +  +   A N LG +  S       +   +  T+ T       +P++
Sbjct: 690  TAQLKLSPYV---NYSFRVMAVNSLGRSLPSEPSEQYLTKAAEPDTNPTAVEGLGSEPDN 746

Query: 317  YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
              +       F  N    P L+  + W +     ++ S    V +N     V+ +     
Sbjct: 747  LVITWKPLNGFESNG---PGLQYKVSWRQKDGDDEWAS---VVVANVSKYIVSGTPTFVP 800

Query: 377  GQYTCRAQTELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
                 +A  ++ F    A +       +P+ AP N   + V+++  A V W+PV  +S+R
Sbjct: 801  YLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIR 859

Query: 433  GHFRGYKVQTWTEKDGEGSIR--------ELIVNKGESTTTEVDKFVPASKNFARVLAFN 484
            GH +GY++  W  K  EGS++        +++  +G  T   +    P S     V   N
Sbjct: 860  GHLQGYRIYYW--KAQEGSLKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYALNVRVVN 917

Query: 485  GAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
            G   GP S    F TPEGVP    SL+ +     +  L+W  P +PNG+L  Y +KYQ +
Sbjct: 918  GKGEGPASPDRVFNTPEGVPSAPSSLKIVNPTLDSLTLEWDPPSRPNGILTEYTLKYQPI 977

Query: 545  KGT-KVGPLLE-RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
              T ++GPL++ ++P       T   L  L  ST+Y+ +    T AG G++
Sbjct: 978  NSTHELGPLVDLKIP----ANKTRWTLKNLNFSTRYKFYFYAQTAAGSGSQ 1024



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 141/566 (24%), Positives = 229/566 (40%), Gaps = 72/566 (12%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS---------DTG 193
           ++ EC A GLP P I+W+     +             NR    N +K+         D+G
Sbjct: 282 LSLECIAEGLPTPVIYWIKEDGTLPT-----------NRTFYRNFKKTLQIIQVSEADSG 330

Query: 194 NYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWI 253
           NY C A N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+
Sbjct: 331 NYQCIAKNALGAIHHTISVTVKA-APYWILAPQNLVLSPGEDGSLICRANGNPKPRISWL 389

Query: 254 HNQK--ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH- 309
            N    E+     +    GD  I ++V    S  Y C A N+ G    +  + V      
Sbjct: 390 SNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPR 449

Query: 310 -ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
            +T     Y+V A + A   C     P    +I W +G++      +   +  N  +L +
Sbjct: 450 ILTSANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALRDDIYVLHENG-TLEI 506

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNP 425
             + +  +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q    + + VS+  
Sbjct: 507 PVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQPE-YAVVQ----RGSTVSF-- 559

Query: 426 VSPQSLRGHFRGYKVQTWTEKDGE-GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN 484
              +    H     + TW + +GE  S     V+K      +V              +  
Sbjct: 560 -ECKVKHDHTLTLTI-TWLKDNGELPSDGRFTVDKDHLEVADVRD------------SDG 605

Query: 485 GAYNGPPSEIISFVTPEGVPGTVQ------SLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
           GAY    +  +  V+   V   V        LE       +  L W   +  N  +  + 
Sbjct: 606 GAYTCVANTTLDMVSASAVLSVVDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFI 665

Query: 539 IKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES---- 594
           I+Y+         L      +S  T T+A+L  L P   Y   +      G    S    
Sbjct: 666 IEYED--AMHEAGLWHHQTEVSG-TQTTAQLK-LSPYVNYSFRVMAVNSLGRSLPSEPSE 721

Query: 595 KYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
           +YL     P  NP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W  
Sbjct: 722 QYLTKAAEPDTNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWAS 781

Query: 653 DDVLDWRQSELVLANQPTFQPYEIKV 678
             V+    S+ +++  PTF PY IKV
Sbjct: 782 --VVVANVSKYIVSGTPTFVPYLIKV 805



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 145/607 (23%), Positives = 235/607 (38%), Gaps = 74/607 (12%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 374 LICRANGNPKPRISWLSNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 429

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T                +C   G P P I W    K 
Sbjct: 430 NEYGYLLANAF-VNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 487

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A  +    +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 488 -GSALRDDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQ 545

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P+      G TV   C+V         + W+ +  EL + GR+T+ +   L++ DV  +D
Sbjct: 546 PEYAVVQRGSTVSFECKVKHDHTLTLTITWLKDNGELPSDGRFTV-DKDHLEVADVRDSD 604

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G YTC A   L     S  L+V +   + + P D E+              D S++LS 
Sbjct: 605 GGAYTCVANTTLDMVSASAVLSVVD---VPNPPFDLELTDQL----------DKSVQLS- 650

Query: 342 VWLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQA 394
            W  G +   PI     E E    ++  +      S    + Q          F + A  
Sbjct: 651 -WTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVN 709

Query: 395 TLTVQVP-----------LEAPSNFTLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQ 441
           +L   +P            E  +N T ++ + ++    V++W P++     G    YKV 
Sbjct: 710 SLGRSLPSEPSEQYLTKAAEPDTNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV- 768

Query: 442 TWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 500
           +W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + 
Sbjct: 769 SWRQKDGDDEWASVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAVVMGHSG 825

Query: 501 EGVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKY---QSVKGTKVGPLLE 554
           E +P     ++    + S+   + W  V  +   G L GY+I Y   Q     +    +E
Sbjct: 826 EDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQEGSLKRNRRHIE 885

Query: 555 RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGS 613
           +       + T   L GLEP + Y +++      G+G A    +F  P       EG  S
Sbjct: 886 KKILTFQGSKTHGMLPGLEPFSHYALNVRVVNGKGEGPASPDRVFNTP-------EGVPS 938

Query: 614 TPNNLVI 620
            P++L I
Sbjct: 939 APSSLKI 945



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 135/342 (39%), Gaps = 53/342 (15%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNGKPIS-QAP 170
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  ISALEVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKD 86

Query: 171 PNPRRKVGPNRITIENLR--KSDT--GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
           P    K G   +TI  +   K++T  G Y C A N  G    +  V   + +P  T+   
Sbjct: 87  PLVTMKPGSGTLTINIMSEGKAETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKL 146

Query: 227 DEYTV-DGKTVVLTCRVFGAPKPE-VNWIHN--QKELTGGRYTILETGDLKITDVAFADS 282
           +  T+ +G+++VL CR      P  + W+ N  Q+     R +    GDL  ++V   D+
Sbjct: 147 EPITLRNGQSLVLPCRPPLGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDT 206

Query: 283 GE-YTCFAR-NKLGTAQGSGSLTVKE----------HTHITD-----------QPEDYEV 319
            E Y C+AR N   T Q    ++VK             +++D           +P  +  
Sbjct: 207 REDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFYSAKPNRERPPTFLT 266

Query: 320 EAGQSAT---FRCNAVSDPSLKLS-----IVWLRGSEPIDFESEPRFVQSNDYSLTVTKS 371
             G ++     R N +S   +        I W++  E     +   F ++   +L + + 
Sbjct: 267 PEGNTSNKEELRGNVLSLECIAEGLPTPVIYWIK--EDGTLPTNRTFYRNFKKTLQIIQV 324

Query: 372 SELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
           SE DSG Y C A+  L  I    ++TV+     + AP N  L
Sbjct: 325 SEADSGNYQCIAKNALGAIHHTISVTVKAAPYWILAPQNLVL 366


>gi|410261560|gb|JAA18746.1| neurofascin [Pan troglodytes]
          Length = 613

 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 132/364 (36%), Positives = 190/364 (52%), Gaps = 10/364 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 246 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 304

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 305 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 363

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 364 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 423

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 424 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 482

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 483 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 542

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 543 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 599

Query: 395 TLTV 398
            LTV
Sbjct: 600 YLTV 603



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 142/365 (38%), Gaps = 32/365 (8%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 220 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 277

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G      P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 278 G---GDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 333

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 334 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 391

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 392 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 451

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 452 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 510

Query: 397 TVQVP 401
            V+ P
Sbjct: 511 EVKDP 515



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 19/210 (9%)

Query: 15  ILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI 74
           +L N   + +       +P+ Q +     V L N+   L C F G+P+P   W K+G   
Sbjct: 411 LLANAFVSVLDVPPRMLSPRNQLI----RVILYNR-TRLDCPFFGSPIPTLRWFKNGQGS 465

Query: 75  NPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV 130
           N    +  GNY      SL IK +   DQG YTC  +N +G+A++  + L V        
Sbjct: 466 N----LDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAEN-QVRLEVKDPTRIYR 520

Query: 131 EPEFINAAEEETVTFECKASGLPEPE--IHWVHNGKPISQAPPNPRRKVGPNRITIENLR 188
            PE   A    TV  EC+    P  +  + W+ + +P+       R K   + +TI  + 
Sbjct: 521 MPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN---RMKKEDDSLTIFGVA 577

Query: 189 KSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           + D G+Y C A+  L       Y+ VL + 
Sbjct: 578 ERDQGSYTCVASTELDQDLAKAYLTVLGNC 607



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 117/297 (39%), Gaps = 30/297 (10%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGN 194
            + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G 
Sbjct: 50  RDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGE 109

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNW 252
           Y C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W
Sbjct: 110 YQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFW 169

Query: 253 IHNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK--- 305
           + +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K   
Sbjct: 170 MSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLT 229

Query: 306 -----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
                E T     P+       V  G      C A   P+    I W +     D  S+ 
Sbjct: 230 TRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDK 285

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
              ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 286 AKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 342



 Score = 45.8 bits (107), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 29/206 (14%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------EDYE 318
              + D           GEY CFARNK GTA     L+ +    ++  P       +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQV 400
              Y+C A+      I+ +   T++V
Sbjct: 202 QTDYSCNARFHFTHTIQQKNPFTLKV 227


>gi|281341481|gb|EFB17065.1| hypothetical protein PANDA_006672 [Ailuropoda melanoleuca]
          Length = 1344

 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 133/373 (35%), Positives = 192/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 252 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 310

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 311 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 369

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  AP NP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 370 WMVNGEPLQSAPRNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 429

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 430 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 488

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 489 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIFRMPEDQVAKRGTTVQLECRVKHD 548

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 549 PSLKLTVTWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCIASTELDQDLAKA 605

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 606 HLTVLADQATPTN 618



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 158/664 (23%), Positives = 264/664 (39%), Gaps = 73/664 (10%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 167 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDTQTDYSCNARFHFTHTIQQ 225

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
             ++++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 226 KNAFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 283

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 284 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 339

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILE-TGDLKI-TDVA 278
            + PK+     G+   L CR  G PKP V W+ N + L    R    E  GD  I  D  
Sbjct: 340 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPRNPNREVAGDTIIFRDTQ 399

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            +    Y C   N+ G    +  ++V +       P +  +        R +     S  
Sbjct: 400 ISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPI 459

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
            ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L V
Sbjct: 460 PTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV 518

Query: 399 QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIRELIV 457
           + P      F + +   AK+       V  +    H    K+  TW + D    I   + 
Sbjct: 519 KDPTRI---FRMPEDQVAKRGTT----VQLECRVKHDPSLKLTVTWLKDDEPLYIGNRMK 571

Query: 458 NKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 500
            + +S T                 TE+D+ +  +K    VLA       P + + +   P
Sbjct: 572 KEDDSLTIFGVAERDQGSYTCIASTELDQDL--AKAHLTVLADQAT---PTNRLAAL--P 624

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560
           +G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   +  
Sbjct: 625 KGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKF-- 681

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGST 614
            P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G+ 
Sbjct: 682 -PGSVNSAVLQLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGTR 740

Query: 615 PNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPY 674
            NN+ I+WT M       P+ +Y + WRR  T E WN  +V  W  S  V+ + P + PY
Sbjct: 741 KNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGSTPVYVPY 797

Query: 675 EIKV 678
           EI+V
Sbjct: 798 EIRV 801



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 100/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP++   I+V+++    + WN V P +++
Sbjct: 797  YEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVK-IRVLNSTAITLQWNRVYPDTVQ 855

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     S+     R+     G+     V +  P S     ++  NG  
Sbjct: 856  GQLREYRAYYWRESSLLKSLWVSQKRQQASFPGDRPRGVVSRLFPYSNYKLEMVVVNGRG 915

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L GY +KY +  GT
Sbjct: 916  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILTGYTLKYVAFNGT 975

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 976  KLGKQIVENF----SPNQTKFTMQRADPVSRYRFTLSARTQVGSG 1016



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 119/296 (40%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSDT--GNY 195
           + +  EC+A G P P  HW  N K   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 57  DNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEDYEGEY 116

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 117 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 176

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFADS-GEYTCFARNKL-GTAQGSGSLTVK---- 305
            +  E      R +    GDL  ++V   D+  +Y+C AR     T Q   + T+K    
Sbjct: 177 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDTQTDYSCNARFHFTHTIQQKNAFTLKVLTT 236

Query: 306 ----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
               E T     P+       V  G      C A   P+    I W +     D  S+  
Sbjct: 237 RGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 292

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 293 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 348



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 87/208 (41%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L+  P IT+    ++ VD +  +++ C   G P P  +W  N K        R ++  
Sbjct: 35  NELSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRR 94

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
                + D           GEY CFARNK GTA     L+ +    ++  P    E+ + 
Sbjct: 95  RSGTLVIDFRSGGRPEDYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 149

Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 150 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 205

Query: 375 DS-GQYTCRAQTELDF-IEAQATLTVQV 400
           D+   Y+C A+      I+ +   T++V
Sbjct: 206 DTQTDYSCNARFHFTHTIQQKNAFTLKV 233


>gi|194387752|dbj|BAG61289.1| unnamed protein product [Homo sapiens]
          Length = 715

 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 132/364 (36%), Positives = 189/364 (51%), Gaps = 10/364 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 348 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 406

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 407 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 465

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 466 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 525

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 526 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 584

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED     G +    C    D
Sbjct: 585 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHD 644

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 645 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 701

Query: 395 TLTV 398
            LTV
Sbjct: 702 YLTV 705



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 143/365 (39%), Gaps = 32/365 (8%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 263 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 321

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 322 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 379

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 380 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 435

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 436 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 493

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 494 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 553

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 554 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 612

Query: 397 TVQVP 401
            V+ P
Sbjct: 613 EVKDP 617



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 19/211 (9%)

Query: 15  ILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI 74
           +L N   + +       +P+ Q +     V L N+   L C F G+P+P   W K+G   
Sbjct: 513 LLANAFVSVLDVPPRMLSPRNQLI----RVILYNR-TRLDCPFFGSPIPTLRWFKNGQGS 567

Query: 75  NPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV 130
           N    +  GNY      SL IK +   DQG YTC  +N +G+A++  + L V        
Sbjct: 568 N----LDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAEN-QVRLEVKDPTRIYR 622

Query: 131 EPEFINAAEEETVTFECKASGLPEPE--IHWVHNGKPISQAPPNPRRKVGPNRITIENLR 188
            PE   A    TV  EC+    P  +  + W+ + +P+       R K   + +TI  + 
Sbjct: 623 MPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN---RMKKEDDSLTIFGVA 679

Query: 189 KSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
           + D G+Y C A+  L       Y+ VL + P
Sbjct: 680 ERDQGSYTCVASTELDQDLAKAYLTVLGNCP 710



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 117/297 (39%), Gaps = 30/297 (10%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGN 194
            + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G 
Sbjct: 152 RDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGE 211

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNW 252
           Y C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W
Sbjct: 212 YQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFW 271

Query: 253 IHNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK--- 305
           + +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K   
Sbjct: 272 MSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLT 331

Query: 306 -----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
                E T     P+       V  G      C A   P+    I W +     D  S+ 
Sbjct: 332 TRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDK 387

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
              ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 388 AKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 444



 Score = 46.2 bits (108), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 29/206 (14%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 133 LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 192

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------EDYE 318
              + D           GEY CFARNK GTA     L+ +    ++  P       +   
Sbjct: 193 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 247

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 248 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 303

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQV 400
              Y+C A+      I+ +   T++V
Sbjct: 304 QTDYSCNARFHFTHTIQQKNPFTLKV 329


>gi|113679606|ref|NP_001038270.1| neuronal cell adhesion molecule precursor [Danio rerio]
          Length = 1285

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 196/727 (26%), Positives = 315/727 (43%), Gaps = 76/727 (10%)

Query: 31  HAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLI 90
           H P  +  T    + L+   +EL CI  G P P   W+K    + PS R S  ++ K+L 
Sbjct: 266 HPPGMESTT----MVLKGDTLELECIADGLPTPNISWTKVNGEL-PSGRFSFYSFQKTLK 320

Query: 91  IKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKAS 150
           IK V  +D G Y C   N +G ++ ++I + V AAP++   P+ +  A +ET    C   
Sbjct: 321 IKEVTEADGGDYRCIAKNRMGSSQ-HTITVVVRAAPFWISAPQNLILAPKETGNLTCDVD 379

Query: 151 GLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDV 210
           G P+P I W  NG PI  +  +P RKV    IT+ +++   +  Y CNA+N  GY+  + 
Sbjct: 380 GNPKPTITWSVNGNPIESSHNDPSRKVSDGVITLSDVQTGSSAVYQCNASNDYGYLLANA 439

Query: 211 YVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHN-QKELTGGRYTILE 268
           +V+VLA  P +  +   EY+V      +L C  FG+P P++ W  + Q  L    Y I +
Sbjct: 440 FVSVLAEPPRVLTSLNHEYSVISNSRALLDCASFGSPLPKITWFKDSQSILNSDLYHIHK 499

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
            G L+I      +SG+YTC A N LG  +    L VKE T I  QPE  EV+    A F 
Sbjct: 500 NGTLEINVAQPQNSGKYTCIASNNLGNKENHVHLQVKEPTRIIRQPEYKEVQRNSIAVFE 559

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C    DP+L  S++WL+ +   +   +PRF   +D SLT+   +E D G YTC   T LD
Sbjct: 560 CKVKHDPTLIPSMIWLKDNG--ELPDDPRFEVGSD-SLTIHDVTEDDEGTYTCIRNTTLD 616

Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV--SWNPVSPQSLRGHFRGYKVQTWTEK 446
              A ATLTV   +E P   T +++ D ++  V  +W P    +     + + +Q     
Sbjct: 617 QDSASATLTV---VEQPDPPTDLELTDQRERSVRLTWTPGDEHN--SPIKLFLIQYEDSL 671

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNG---AYNGPPSEI--ISFVTPE 501
              G    +    G STT +++   P      RVLA NG   + +  PS     +   P+
Sbjct: 672 HEPGVWLNMTEVSGTSTTAQLE-LSPYVYYSFRVLALNGVGLSESSDPSRQYRTNPAKPD 730

Query: 502 GVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
             P  V+     P       + W  +   + NG  + YK+ ++           E+   +
Sbjct: 731 VNPSDVEVSGTSP---DTMTISWRELSGLESNGPGLQYKVSWRMKDA-------EQWTTV 780

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKN-----PDNVEGRGST 614
           +    +   + G    T Y + +      G+G   + +     +N     P+NV+    +
Sbjct: 781 TLANVSQHVVTGTPTFTLYEVTVQAVNDYGEGPRPEVVLGYSGENSPTVAPENVKVSVQS 840

Query: 615 PNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPY 674
                + W A+P          Y++ +++                               
Sbjct: 841 GTEAEVHWEAVPLSSVRGRLKGYKVTYQK------------------------------- 869

Query: 675 EIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 734
               +++  ++D +    ++++  GE T   +    P S     + AFNG  +GP S   
Sbjct: 870 ----MRSLHKQDYDRENPQVLIFSGEETVGRLPDLHPYSHYRLNIRAFNGHGDGPSSTDQ 925

Query: 735 SFVTPEG 741
            F TPEG
Sbjct: 926 QFQTPEG 932



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 159/658 (24%), Positives = 243/658 (36%), Gaps = 115/658 (17%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P   WS +G PI     +PS ++S G     + +  V+      Y C  S
Sbjct: 374 LTCDVDGNPKPTITWSVNGNPIESSHNDPSRKVSDG----VITLSDVQTGSSAVYQCNAS 429

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEE-------TVTFECKASGLPEPEIHWV 160
           N  G   + +  +SVLA P     P  + +   E           +C + G P P+I W 
Sbjct: 430 NDYGYLLANAF-VSVLAEP-----PRVLTSLNHEYSVISNSRALLDCASFGSPLPKITWF 483

Query: 161 HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
            + + I  +      K G   I +   +  ++G Y C A+N+LG     V++ V      
Sbjct: 484 KDSQSILNSDLYHIHKNGTLEINVA--QPQNSGKYTCIASNNLGNKENHVHLQV-KEPTR 540

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRYTILETGDLKITDVA 278
           I   P+ +        V  C+V   P   P + W+ +  EL       + +  L I DV 
Sbjct: 541 IIRQPEYKEVQRNSIAVFECKVKHDPTLIPSMIWLKDNGELPDDPRFEVGSDSLTIHDVT 600

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC--------- 329
             D G YTC     L     S +LTV E     D P D E+   +  + R          
Sbjct: 601 EDDEGTYTCIRNTTLDQDSASATLTVVEQP---DPPTDLELTDQRERSVRLTWTPGDEHN 657

Query: 330 -----------NAVSDPSLKLSIVWLRG-SEPIDFESEP------RFVQSNDYSLTVTKS 371
                      +++ +P + L++  + G S     E  P      R +  N   L+  +S
Sbjct: 658 SPIKLFLIQYEDSLHEPGVWLNMTEVSGTSTTAQLELSPYVYYSFRVLALNGVGLS--ES 715

Query: 372 SELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
           S+      T  A+ +++  + + + T      +P   T           +SW  +S    
Sbjct: 716 SDPSRQYRTNPAKPDVNPSDVEVSGT------SPDTMT-----------ISWRELSGLES 758

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            G    YKV +W  KD E      + N  +   T    F         V A N    GP 
Sbjct: 759 NGPGLQYKV-SWRMKDAEQWTTVTLANVSQHVVTGTPTFTLYE---VTVQAVNDYGEGPR 814

Query: 492 SEII--------SFVTPEGVPGTVQS-------LEAIPLGSSAFYLKWVKPEQPNGVLMG 536
            E++          V PE V  +VQS        EA+PL S              G L G
Sbjct: 815 PEVVLGYSGENSPTVAPENVKVSVQSGTEAEVHWEAVPLSSV------------RGRLKG 862

Query: 537 YKIKYQSVKGTKVGPLLERLP--YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           YK+ YQ ++           P   I     T  +L  L P + YR+++  +   GDG  S
Sbjct: 863 YKVTYQKMRSLHKQDYDRENPQVLIFSGEETVGRLPDLHPYSHYRLNIRAFNGHGDGPSS 922

Query: 595 -KYLFYVPF---KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
               F  P      P NV  R    ++L++ WT  P +E N     Y + ++  NT E
Sbjct: 923 TDQQFQTPEGVPGPPTNVNIRNLNLDSLLVEWT--PPLEDNGHLTGYLLKYQPINTTE 978



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 92/196 (46%), Gaps = 8/196 (4%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV-----QTWTEKDGEGSIREL 455
            P  AP N   + V    +A V W  V   S+RG  +GYKV     ++  ++D +    ++
Sbjct: 827  PTVAPENVK-VSVQSGTEAEVHWEAVPLSSVRGRLKGYKVTYQKMRSLHKQDYDRENPQV 885

Query: 456  IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPL 515
            ++  GE T   +    P S     + AFNG  +GP S    F TPEGVPG   ++    L
Sbjct: 886  LIFSGEETVGRLPDLHPYSHYRLNIRAFNGHGDGPSSTDQQFQTPEGVPGPPTNVNIRNL 945

Query: 516  GSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +  ++W  P + NG L GY +KYQ +  T+   LL+ +  +     TS  L  L  S
Sbjct: 946  NLDSLLVEWTPPLEDNGHLTGYLLKYQPINTTEEAGLLKEV--LLPANETSYTLDKLTHS 1003

Query: 576  TKYRIHLAGYTKAGDG 591
            T Y+  L   T+ G G
Sbjct: 1004 THYKFFLNAMTETGSG 1019



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 95/394 (24%), Positives = 161/394 (40%), Gaps = 50/394 (12%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG----VPINPSDRISQGNYGKSLIIKHVEFSD--QGSY 102
           + + +FC   G P P   W+++G    V  +P   +  G  G  +I    E ++  +G Y
Sbjct: 56  ENINIFCEAKGKPHPSFSWTRNGTHFDVEKDPKVVMMPGT-GNLVIDISGEKAEVYEGVY 114

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWV 160
            C   N  G A S +I +    +P ++ E  E I      ++  +C+  +GLP P I W+
Sbjct: 115 QCIARNEHGSAVSNNIVIRQSRSPLWSKEKNEPITVQRGTSLILQCRPPAGLPPPIIFWM 174

Query: 161 HNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGN-YGCNA----TNSLGYVYKDVYVNV 214
            N     + P N R     N  +   N+   DT N Y C A    T ++    + + V V
Sbjct: 175 DNN--FQRLPQNSRVSQALNGDLYFSNVIMEDTRNDYICYARFPHTQTIQQ-KQPITVKV 231

Query: 215 L--------------------------AHAPEITEAPKDEYT---VDGKTVVLTCRVFGA 245
           L                             P     P  E T   + G T+ L C   G 
Sbjct: 232 LDIEAMNDTVLAAFLNGSDFWGDSPSGERVPSFLHPPGMESTTMVLKGDTLELECIADGL 291

Query: 246 PKPEVNWIHNQKELTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTV 304
           P P ++W     EL  GR++       LKI +V  AD G+Y C A+N++G++Q + ++ V
Sbjct: 292 PTPNISWTKVNGELPSGRFSFYSFQKTLKIKEVTEADGGDYRCIAKNRMGSSQHTITVVV 351

Query: 305 KEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDY 364
           +        P++  +   ++    C+   +P  K +I W     PI+        + +D 
Sbjct: 352 RAAPFWISAPQNLILAPKETGNLTCDVDGNP--KPTITWSVNGNPIESSHNDPSRKVSDG 409

Query: 365 SLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
            +T++      S  Y C A  +  ++ A A ++V
Sbjct: 410 VITLSDVQTGSSAVYQCNASNDYGYLLANAFVSV 443



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 121/318 (38%), Gaps = 55/318 (17%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIE-NLRKSDT--GNYG 196
           E +   C+A G P P   W  NG     +  P      G   + I+ +  K++   G Y 
Sbjct: 56  ENINIFCEAKGKPHPSFSWTRNGTHFDVEKDPKVVMMPGTGNLVIDISGEKAEVYEGVYQ 115

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCR-VFGAPKPEVNWIH 254
           C A N  G    +  V   + +P  ++   +  TV  G +++L CR   G P P + W+ 
Sbjct: 116 CIARNEHGSAVSNNIVIRQSRSPLWSKEKNEPITVQRGTSLILQCRPPAGLPPPIIFWMD 175

Query: 255 N--QKELTGGRYTILETGDLKITDVAFADS-GEYTCFAR-NKLGTAQGSGSLTVK----E 306
           N  Q+     R +    GDL  ++V   D+  +Y C+AR     T Q    +TVK    E
Sbjct: 176 NNFQRLPQNSRVSQALNGDLYFSNVIMEDTRNDYICYARFPHTQTIQQKQPITVKVLDIE 235

Query: 307 HTHIT-------------DQPEDYEVEA---------------GQSATFRCNAVSDPSLK 338
             + T             D P    V +               G +    C A   P+  
Sbjct: 236 AMNDTVLAAFLNGSDFWGDSPSGERVPSFLHPPGMESTTMVLKGDTLELECIADGLPTPN 295

Query: 339 LSIVWLRGSEPIDFESEPRF-VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +S   + G  P       RF   S   +L + + +E D G Y C A+  +    +Q T+T
Sbjct: 296 ISWTKVNGELP-----SGRFSFYSFQKTLKIKEVTEADGGDYRCIAKNRMG--SSQHTIT 348

Query: 398 VQVP-----LEAPSNFTL 410
           V V      + AP N  L
Sbjct: 349 VVVRAAPFWISAPQNLIL 366


>gi|237858680|ref|NP_001005389.2| neurofascin isoform 5 precursor [Homo sapiens]
 gi|193786880|dbj|BAG52203.1| unnamed protein product [Homo sapiens]
          Length = 619

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 132/364 (36%), Positives = 189/364 (51%), Gaps = 10/364 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 252 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 310

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 311 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 369

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 370 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 429

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 430 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 488

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED     G +    C    D
Sbjct: 489 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHD 548

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 549 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 605

Query: 395 TLTV 398
            LTV
Sbjct: 606 YLTV 609



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 142/365 (38%), Gaps = 32/365 (8%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 167 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 225

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 226 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 283

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G      P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 284 G---GDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 339

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 340 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 397

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 398 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 457

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 458 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 516

Query: 397 TVQVP 401
            V+ P
Sbjct: 517 EVKDP 521



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 19/211 (9%)

Query: 15  ILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI 74
           +L N   + +       +P+ Q +     V L N+   L C F G+P+P   W K+G   
Sbjct: 417 LLANAFVSVLDVPPRMLSPRNQLI----RVILYNR-TRLDCPFFGSPIPTLRWFKNGQGS 471

Query: 75  NPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV 130
           N    +  GNY      SL IK +   DQG YTC  +N +G+A++  + L V        
Sbjct: 472 N----LDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAEN-QVRLEVKDPTRIYR 526

Query: 131 EPEFINAAEEETVTFECKASGLPEPE--IHWVHNGKPISQAPPNPRRKVGPNRITIENLR 188
            PE   A    TV  EC+    P  +  + W+ + +P+       R K   + +TI  + 
Sbjct: 527 MPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN---RMKKEDDSLTIFGVA 583

Query: 189 KSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
           + D G+Y C A+  L       Y+ VL + P
Sbjct: 584 ERDQGSYTCVASTELDQDLAKAYLTVLGNCP 614



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 117/297 (39%), Gaps = 30/297 (10%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGN 194
            + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G 
Sbjct: 56  RDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGE 115

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNW 252
           Y C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W
Sbjct: 116 YQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFW 175

Query: 253 IHNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK--- 305
           + +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K   
Sbjct: 176 MSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLT 235

Query: 306 -----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
                E T     P+       V  G      C A   P+    I W +     D  S+ 
Sbjct: 236 TRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDK 291

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
              ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 292 AKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 348



 Score = 47.4 bits (111), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++  
Sbjct: 35  NELTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 94

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------ED 316
                + D           GEY CFARNK GTA     L+ +    ++  P       + 
Sbjct: 95  RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 149

Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 150 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 205

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
           D    Y+C A+      I+ +   T++V
Sbjct: 206 DMQTDYSCNARFHFTHTIQQKNPFTLKV 233


>gi|237858682|ref|NP_001153805.1| neurofascin isoform 6 precursor [Homo sapiens]
          Length = 613

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 132/364 (36%), Positives = 189/364 (51%), Gaps = 10/364 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 246 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 304

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 305 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 363

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 364 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 423

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 424 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 482

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED     G +    C    D
Sbjct: 483 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHD 542

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 543 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 599

Query: 395 TLTV 398
            LTV
Sbjct: 600 YLTV 603



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 142/365 (38%), Gaps = 32/365 (8%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 220 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 277

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G      P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 278 G---GDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 333

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 334 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 391

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P +  +        R +     S
Sbjct: 392 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 451

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 452 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 510

Query: 397 TVQVP 401
            V+ P
Sbjct: 511 EVKDP 515



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 19/211 (9%)

Query: 15  ILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI 74
           +L N   + +       +P+ Q +     V L N+   L C F G+P+P   W K+G   
Sbjct: 411 LLANAFVSVLDVPPRMLSPRNQLI----RVILYNR-TRLDCPFFGSPIPTLRWFKNGQGS 465

Query: 75  NPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV 130
           N    +  GNY      SL IK +   DQG YTC  +N +G+A++  + L V        
Sbjct: 466 N----LDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAEN-QVRLEVKDPTRIYR 520

Query: 131 EPEFINAAEEETVTFECKASGLPEPE--IHWVHNGKPISQAPPNPRRKVGPNRITIENLR 188
            PE   A    TV  EC+    P  +  + W+ + +P+       R K   + +TI  + 
Sbjct: 521 MPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN---RMKKEDDSLTIFGVA 577

Query: 189 KSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
           + D G+Y C A+  L       Y+ VL + P
Sbjct: 578 ERDQGSYTCVASTELDQDLAKAYLTVLGNCP 608



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 117/297 (39%), Gaps = 30/297 (10%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGN 194
            + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G 
Sbjct: 50  RDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGE 109

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNW 252
           Y C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W
Sbjct: 110 YQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFW 169

Query: 253 IHNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK--- 305
           + +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K   
Sbjct: 170 MSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLT 229

Query: 306 -----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
                E T     P+       V  G      C A   P+    I W +     D  S+ 
Sbjct: 230 TRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDK 285

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
              ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 286 AKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 342



 Score = 46.2 bits (108), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 29/206 (14%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------EDYE 318
              + D           GEY CFARNK GTA     L+ +    ++  P       +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQV 400
              Y+C A+      I+ +   T++V
Sbjct: 202 QTDYSCNARFHFTHTIQQKNPFTLKV 227


>gi|326933709|ref|XP_003212943.1| PREDICTED: neurofascin-like [Meleagris gallopavo]
          Length = 1043

 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 139/404 (34%), Positives = 207/404 (51%), Gaps = 21/404 (5%)

Query: 37  YVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEF 96
           Y T   ++ LR   + L CI  G P P  +W K G  + P+ +    N+ K+L I +V  
Sbjct: 66  YGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGGEL-PAGKTKLENFNKALRISNVSE 124

Query: 97  SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE 156
            D G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P 
Sbjct: 125 EDSGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPQNLILAPGEDGRLVCRANGNPKPS 183

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           I W+ NG+PI  +PPNP R+V  + I   + +   +  Y CNA+N  GY+  + +V+VL 
Sbjct: 184 IQWLVNGEPIEGSPPNPSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLD 243

Query: 217 HAPEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDL 272
             P I  AP+++    +      L C  FG+P P + W  N +   L GG Y   E G L
Sbjct: 244 VPPRIL-APRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQGNTLDGGNYKAHENGSL 302

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV 332
           +++     D G YTC A N LG A+    L VK+ T I   PED  V+ G      C   
Sbjct: 303 EMSMARKEDQGIYTCVATNILGKAEAQVRLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVK 362

Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
            DP+LKL++ WL+   P+   +    ++  D  LT+   +E D G YTC A TELD   A
Sbjct: 363 HDPTLKLTVTWLKDDAPLYIGNR---MKKEDDGLTIYGVAEKDQGDYTCVASTELDKDSA 419

Query: 393 QATLTV---------QVPLEAPSNFTLIQVID-AKKAV-VSWNP 425
           +A LTV         ++P E P     +++ D A+++V ++W P
Sbjct: 420 KAYLTVLAIPANRLRELPKERPDRPRDLELSDLAERSVKLTWIP 463



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 151/584 (25%), Positives = 222/584 (38%), Gaps = 78/584 (13%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P   W  +G PI     NPS  ++    G +++ +  +      Y C  S
Sbjct: 172 LVCRANGNPKPSIQWLVNGEPIEGSPPNPSREVA----GDTIVFRDTQIGSSAVYQCNAS 227

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  +SVL  P   + P  + I   +      +C   G P P + W  NG+ 
Sbjct: 228 NEHGYLLANAF-VSVLDVPPRILAPRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQG 286

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
            +    N +       + +   RK D G Y C ATN LG     V + V      I   P
Sbjct: 287 NTLDGGNYKAHEN-GSLEMSMARKEDQGIYTCVATNILGKAEAQVRLEV-KDPTRIVRGP 344

Query: 226 KDEYTVDGKTVVLTCRVFGAP--KPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSG 283
           +D+    G    L CRV   P  K  V W+ +   L  G     E   L I  VA  D G
Sbjct: 345 EDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKEDDGLTIYGVAEKDQG 404

Query: 284 EYTCFARNKLGTAQGSGSLTV------------KEHTHITDQPEDYEVEAGQSATFRCNA 331
           +YTC A  +L        LTV            KE     D+P D E+          + 
Sbjct: 405 DYTCVASTELDKDSAKAYLTVLAIPANRLRELPKERP---DRPRDLEL----------SD 451

Query: 332 VSDPSLKLSIVWLRGSE---PI-----DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +++ S+KL+  W+ G +   PI      FE E RF Q   +         ++S   +   
Sbjct: 452 LAERSVKLT--WIPGDDNNSPITDYIVQFE-EDRF-QPGTWHNHSRYPGNVNSAVLSLSP 507

Query: 384 QTELDF-IEAQATLTVQVPLEAPS------------NFTLIQVIDAKK--AVVSWNPVSP 428
                F + A   +   +P   PS            N T +Q    +K    ++W P++ 
Sbjct: 508 YVNYQFRVIAVNDVGSSLP-SMPSERYQTSGARPEINPTGVQGAGTQKNNMEITWTPLNA 566

Query: 429 QSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
               G    Y V+ W  +D  GS     V            +VP      +V A N    
Sbjct: 567 TQAYGPNLRYIVR-WRRRDPRGSWYNETVKAPRHVVWNTPIYVPYE---IKVQAENDFGR 622

Query: 489 GPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTK 548
            P  E     + E +P + + L        +  L+W  PE PNGVL GY ++YQ+  G+K
Sbjct: 623 APEPETYIGYSGEDLPSSPRYLRIRQPNLESINLEWDHPEHPNGVLTGYNLRYQAFNGSK 682

Query: 549 VG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            G  L+E       P  T   +   +P ++YR  L   T+ GDG
Sbjct: 683 TGRTLVENF----SPNQTRFTVQRTDPISRYRFFLRARTQVGDG 722



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 133/566 (23%), Positives = 225/566 (39%), Gaps = 61/566 (10%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATN 201
           +  EC ASG+P P+I W   G    + P    +    N+ + I N+ + D+G Y C A+N
Sbjct: 80  LLLECIASGVPAPDIMWYKKG---GELPAGKTKLENFNKALRISNVSEEDSGEYFCLASN 136

Query: 202 SLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG 261
            +G +   + V V A AP   + P++     G+   L CR  G PKP + W+ N + + G
Sbjct: 137 KMGSIRHTISVRVKA-APYWLDEPQNLILAPGEDGRLVCRANGNPKPSIQWLVNGEPIEG 195

Query: 262 G-----RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
                 R    +T  +   D     S  Y C A N+ G    +  ++V +       P +
Sbjct: 196 SPPNPSREVAGDT--IVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRILAPRN 253

Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
             ++  Q    R +     S   ++ W +  +    +        N  SL ++ + + D 
Sbjct: 254 QLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQGNTLDGGNYKAHENG-SLEMSMARKEDQ 312

Query: 377 GQYTCRAQTELDFIEAQATLTVQVPLE--------------APSNFTLIQVIDAKKAVVS 422
           G YTC A   L   EAQ  L V+ P                 P     ++     K  V+
Sbjct: 313 GIYTCVATNILGKAEAQVRLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVT 372

Query: 423 W-NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGEST---TTEVDKFVPASKNFA 478
           W    +P  +    +        E DG         ++G+ T   +TE+DK   ++K + 
Sbjct: 373 WLKDDAPLYIGNRMK-------KEDDGLTIYGVAEKDQGDYTCVASTELDK--DSAKAYL 423

Query: 479 RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
            VLA       P + +     P+  P   + LE   L   +  L W+  +  N  +  Y 
Sbjct: 424 TVLAI------PANRLREL--PKERPDRPRDLELSDLAERSVKLTWIPGDDNNSPITDYI 475

Query: 539 IKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES---- 594
           ++++  +  + G       Y   P   ++ +  L P   Y+  +      G    S    
Sbjct: 476 VQFEEDR-FQPGTWHNHSRY---PGNVNSAVLSLSPYVNYQFRVIAVNDVGSSLPSMPSE 531

Query: 595 KYLF--YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
           +Y      P  NP  V+G G+  NN+ I+WT +   +   P+ +Y + WRR +   +W  
Sbjct: 532 RYQTSGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYN 591

Query: 653 DDVLDWRQSELVLANQPTFQPYEIKV 678
           + V   +    V+ N P + PYEIKV
Sbjct: 592 ETV---KAPRHVVWNTPIYVPYEIKV 614


>gi|301765660|ref|XP_002918247.1| PREDICTED: neurofascin-like isoform 1 [Ailuropoda melanoleuca]
          Length = 1237

 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 133/373 (35%), Positives = 192/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 252 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 310

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 311 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 369

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  AP NP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 370 WMVNGEPLQSAPRNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 429

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 430 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 488

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 489 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIFRMPEDQVAKRGTTVQLECRVKHD 548

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 549 PSLKLTVTWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCIASTELDQDLAKA 605

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 606 HLTVLADQATPTN 618



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 158/664 (23%), Positives = 265/664 (39%), Gaps = 73/664 (10%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 167 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDTQTDYSCNARFHFTHTIQQ 225

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
             ++++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 226 KNAFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 283

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 284 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 339

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILE-TGDLKI-TDVA 278
            + PK+     G+   L CR  G PKP V W+ N + L +  R    E  GD  I  D  
Sbjct: 340 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPRNPNREVAGDTIIFRDTQ 399

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            +    Y C   N+ G    +  ++V +       P +  +        R +     S  
Sbjct: 400 ISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPI 459

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
            ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L V
Sbjct: 460 PTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV 518

Query: 399 QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIRELIV 457
           + P      F + +   AK+       V  +    H    K+  TW + D    I   + 
Sbjct: 519 KDPTRI---FRMPEDQVAKRGTT----VQLECRVKHDPSLKLTVTWLKDDEPLYIGNRMK 571

Query: 458 NKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 500
            + +S T                 TE+D+ +  +K    VLA       P + + +   P
Sbjct: 572 KEDDSLTIFGVAERDQGSYTCIASTELDQDL--AKAHLTVLADQAT---PTNRLAAL--P 624

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560
           +G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   +  
Sbjct: 625 KGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKF-- 681

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGST 614
            P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G+ 
Sbjct: 682 -PGSVNSAVLQLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGTR 740

Query: 615 PNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPY 674
            NN+ I+WT M       P+ +Y + WRR  T E WN  +V  W  S  V+ + P + PY
Sbjct: 741 KNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGSTPVYVPY 797

Query: 675 EIKV 678
           EI+V
Sbjct: 798 EIRV 801



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 119/296 (40%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSDT--GNY 195
           + +  EC+A G P P  HW  N K   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 57  DNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEDYEGEY 116

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 117 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 176

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFADS-GEYTCFARNKL-GTAQGSGSLTVK---- 305
            +  E      R +    GDL  ++V   D+  +Y+C AR     T Q   + T+K    
Sbjct: 177 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDTQTDYSCNARFHFTHTIQQKNAFTLKVLTT 236

Query: 306 ----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
               E T     P+       V  G      C A   P+    I W +     D  S+  
Sbjct: 237 RGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 292

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 293 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 348



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 9/172 (5%)

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           ++W P++  S  G    Y V+ W  ++   +   + V            +VP      RV
Sbjct: 746 ITWTPMNATSAFGPNLRYIVK-WRRRETRETWNNVTVWGSRYVVGSTPVYVPYE---IRV 801

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
            A N    GP  + +   + E +P   +             L+W  PE PNG+L GY +K
Sbjct: 802 QAENDFGKGPEPDTVIGYSGEDLPSAPRRFRVRQPNLETINLEWDHPEHPNGILTGYTLK 861

Query: 541 YQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           Y +  GTK+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 862 YVAFNGTKLGKQIVENF----SPNQTKFTMQRADPVSRYRFTLSARTQVGSG 909



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 87/208 (41%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L+  P IT+    ++ VD +  +++ C   G P P  +W  N K        R ++  
Sbjct: 35  NELSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRR 94

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
                + D           GEY CFARNK GTA     L+ +    ++  P    E+ + 
Sbjct: 95  RSGTLVIDFRSGGRPEDYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 149

Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 150 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 205

Query: 375 DS-GQYTCRAQTELDF-IEAQATLTVQV 400
           D+   Y+C A+      I+ +   T++V
Sbjct: 206 DTQTDYSCNARFHFTHTIQQKNAFTLKV 233


>gi|301765662|ref|XP_002918248.1| PREDICTED: neurofascin-like isoform 2 [Ailuropoda melanoleuca]
          Length = 1189

 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 133/373 (35%), Positives = 192/373 (51%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 263 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 321

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 322 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 380

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  AP NP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 381 WMVNGEPLQSAPRNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 440

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 441 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 499

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 500 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIFRMPEDQVAKRGTTVQLECRVKHD 559

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 560 PSLKLTVTWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCIASTELDQDLAKA 616

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 617 HLTVLADQATPTN 629



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 163/680 (23%), Positives = 269/680 (39%), Gaps = 88/680 (12%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDTQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
             ++++ + +   PY        P+  +A    E T +F                    E
Sbjct: 220 KNAFTLKV-LTNNPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLE 278

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 279 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 335

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RY 264
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L    R 
Sbjct: 336 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPRN 394

Query: 265 TILET-GDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAG 322
              E  GD  I  D   +    Y C   N+ G    +  ++V +       P +  +   
Sbjct: 395 PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVI 454

Query: 323 QSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCR 382
                R +     S   ++ W +  +  + +     V  N  SL +    + D G YTC 
Sbjct: 455 LYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCV 513

Query: 383 AQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ- 441
           A   L   E Q  L V+ P      F + +   AK+       V  +    H    K+  
Sbjct: 514 ATNILGKAENQVRLEVKDPTRI---FRMPEDQVAKRGTT----VQLECRVKHDPSLKLTV 566

Query: 442 TWTEKDGEGSIRELIVNKGESTT-----------------TEVDKFVPASKNFARVLAFN 484
           TW + D    I   +  + +S T                 TE+D+ +  +K    VLA  
Sbjct: 567 TWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCIASTELDQDL--AKAHLTVLADQ 624

Query: 485 GAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
                P + + +   P+G P   + LE   L   +  L W+  +  N  +  Y ++++  
Sbjct: 625 AT---PTNRLAAL--PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEED 679

Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLF 598
           +  + G   +   +   P + ++ +  L P   Y+  +    + G    S      +   
Sbjct: 680 Q-FQPGVWHDHSKF---PGSVNSAVLQLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSG 735

Query: 599 YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDW 658
             P  NP +V+G G+  NN+ I+WT M       P+ +Y + WRR  T E WN  +V  W
Sbjct: 736 APPESNPADVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW 793

Query: 659 RQSELVLANQPTFQPYEIKV 678
             S  V+ + P + PYEI+V
Sbjct: 794 -GSRYVVGSTPVYVPYEIRV 812



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 100/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP++   I+V+++    + WN V P +++
Sbjct: 808  YEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVK-IRVLNSTAITLQWNRVYPDTVQ 866

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     S+     R+     G+     V +  P S     ++  NG  
Sbjct: 867  GQLREYRAYYWRESSLLKSLWVSQKRQQASFPGDRPRGVVSRLFPYSNYKLEMVVVNGRG 926

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L GY +KY +  GT
Sbjct: 927  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILTGYTLKYVAFNGT 986

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 987  KLGKQIVENF----SPNQTKFTMQRADPVSRYRFTLSARTQVGSG 1027



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 122/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSDT--GNY 195
           + +  EC+A G P P  HW  N K   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEDYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFADSG-EYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D+  +Y+C AR     T Q   + T+K  T+
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDTQTDYSCNARFHFTHTIQQKNAFTLKVLTN 230

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 231 NPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PD 288

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 289 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 346

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 347 APYWLDEPKNLIL 359



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 101/251 (40%), Gaps = 47/251 (18%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELT---GGRYTILETG 270
           L+  P IT+    ++ VD +  +++ C   G P P  +W  N K        R ++    
Sbjct: 31  LSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEDYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDS 376
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D+
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDT 201

Query: 377 G-QYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
              Y+C A+          T T+Q      + FTL         V++ NP +  SLR H 
Sbjct: 202 QTDYSCNARFHF-------THTIQ----QKNAFTL--------KVLTNNPYNDSSLRNHP 242

Query: 436 RGYKVQTWTEK 446
             Y  +   E+
Sbjct: 243 DMYSARGVAER 253


>gi|301765664|ref|XP_002918249.1| PREDICTED: neurofascin-like isoform 3 [Ailuropoda melanoleuca]
          Length = 1174

 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 135/391 (34%), Positives = 200/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 263 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 321

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 322 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 380

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  AP NP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 381 WMVNGEPLQSAPRNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 440

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 441 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 499

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 500 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIFRMPEDQVAKRGTTVQLECRVKHD 559

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 560 PSLKLTVTWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCIASTELDQDLAKA 616

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P +  L  + + +   ++W P
Sbjct: 617 HLTVLGRPDRPRDLELTDLAE-RSVRLTWIP 646



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 159/669 (23%), Positives = 261/669 (39%), Gaps = 81/669 (12%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDTQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
             ++++ + +   PY        P+  +A    E T +F                    E
Sbjct: 220 KNAFTLKV-LTNNPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLE 278

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 279 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 335

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RY 264
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L    R 
Sbjct: 336 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPRN 394

Query: 265 TILET-GDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAG 322
              E  GD  I  D   +    Y C   N+ G    +  ++V +       P +  +   
Sbjct: 395 PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVI 454

Query: 323 QSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCR 382
                R +     S   ++ W +  +  + +     V  N  SL +    + D G YTC 
Sbjct: 455 LYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCV 513

Query: 383 AQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ- 441
           A   L   E Q  L V+ P      F + +   AK+       V  +    H    K+  
Sbjct: 514 ATNILGKAENQVRLEVKDPTRI---FRMPEDQVAKRGTT----VQLECRVKHDPSLKLTV 566

Query: 442 TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII------ 495
           TW + D    I   +  + +S T            F       G+Y    S  +      
Sbjct: 567 TWLKDDEPLYIGNRMKKEDDSLTI-----------FGVAERDQGSYTCIASTELDQDLAK 615

Query: 496 SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
           + +T  G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   + 
Sbjct: 616 AHLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDH 674

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVE 609
             +   P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+
Sbjct: 675 SKF---PGSVNSAVLQLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVK 731

Query: 610 GRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQP 669
           G G+  NN+ I+WT M       P+ +Y + WRR  T E WN  +V  W  S  V+ + P
Sbjct: 732 GEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGSTP 788

Query: 670 TFQPYEIKV 678
            + PYEI+V
Sbjct: 789 VYVPYEIRV 797



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 100/225 (44%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP++   I+V+++    + WN V P +++
Sbjct: 793  YEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVK-IRVLNSTAITLQWNRVYPDTVQ 851

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E     S+     R+     G+     V +  P S     ++  NG  
Sbjct: 852  GQLREYRAYYWRESSLLKSLWVSQKRQQASFPGDRPRGVVSRLFPYSNYKLEMVVVNGRG 911

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE   F TPEGVP   +             L+W  PE PNG+L GY +KY +  GT
Sbjct: 912  DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILTGYTLKYVAFNGT 971

Query: 548  KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K+G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 972  KLGKQIVENF----SPNQTKFTMQRADPVSRYRFTLSARTQVGSG 1012



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 122/313 (38%), Gaps = 47/313 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSDT--GNY 195
           + +  EC+A G P P  HW  N K   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEDYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFADS-GEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D+  +Y+C AR     T Q   + T+K  T+
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDTQTDYSCNARFHFTHTIQQKNAFTLKVLTN 230

Query: 310 -------ITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKLS 340
                  + + P+ Y                       V  G      C A   P+    
Sbjct: 231 NPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PD 288

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+ 
Sbjct: 289 IAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 346

Query: 401 P---LEAPSNFTL 410
               L+ P N  L
Sbjct: 347 APYWLDEPKNLIL 359



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 101/251 (40%), Gaps = 47/251 (18%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L+  P IT+    ++ VD +  +++ C   G P P  +W  N K        R ++    
Sbjct: 31  LSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEDYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDS 376
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D+
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDT 201

Query: 377 -GQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
              Y+C A+          T T+Q      + FTL         V++ NP +  SLR H 
Sbjct: 202 QTDYSCNARFHF-------THTIQ----QKNAFTL--------KVLTNNPYNDSSLRNHP 242

Query: 436 RGYKVQTWTEK 446
             Y  +   E+
Sbjct: 243 DMYSARGVAER 253


>gi|410341803|gb|JAA39848.1| neurofascin [Pan troglodytes]
          Length = 715

 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 132/364 (36%), Positives = 190/364 (52%), Gaps = 10/364 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 348 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 406

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 407 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 465

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 466 WMVNGEPLQLAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 525

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 526 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 584

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 585 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 644

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 645 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 701

Query: 395 TLTV 398
            LTV
Sbjct: 702 YLTV 705



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 143/363 (39%), Gaps = 28/363 (7%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 263 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 321

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 322 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 379

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 380 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 435

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI-TDVA 278
            + PK+     G+   L CR  G PKP V W+ N +  +L          GD  I  D  
Sbjct: 436 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQLAPPNPNREVAGDTIIFRDTQ 495

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            +    Y C   N+ G    +  ++V +       P +  +        R +     S  
Sbjct: 496 ISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPI 555

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
            ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L V
Sbjct: 556 PTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV 614

Query: 399 QVP 401
           + P
Sbjct: 615 KDP 617



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 19/210 (9%)

Query: 15  ILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI 74
           +L N   + +       +P+ Q +     V L N+   L C F G+P+P   W K+G   
Sbjct: 513 LLANAFVSVLDVPPRMLSPRNQLI----RVILYNR-TRLDCPFFGSPIPTLRWFKNGQGS 567

Query: 75  NPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV 130
           N    +  GNY      SL IK +   DQG YTC  +N +G+A++  + L V        
Sbjct: 568 N----LDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAEN-QVRLEVKDPTRIYR 622

Query: 131 EPEFINAAEEETVTFECKASGLPEPE--IHWVHNGKPISQAPPNPRRKVGPNRITIENLR 188
            PE   A    TV  EC+    P  +  + W+ + +P+       R K   + +TI  + 
Sbjct: 623 MPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN---RMKKEDDSLTIFGVA 679

Query: 189 KSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           + D G+Y C A+  L       Y+ VL + 
Sbjct: 680 ERDQGSYTCVASTELDQDLAKAYLTVLGNC 709



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 117/297 (39%), Gaps = 30/297 (10%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGN 194
            + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G 
Sbjct: 152 RDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGE 211

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNW 252
           Y C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W
Sbjct: 212 YQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFW 271

Query: 253 IHNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK--- 305
           + +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K   
Sbjct: 272 MSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLT 331

Query: 306 -----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
                E T     P+       V  G      C A   P+    I W +     D  S+ 
Sbjct: 332 TRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDK 387

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
              ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 388 AKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 444



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 29/206 (14%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 133 LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 192

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 193 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 247

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 248 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 303

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQV 400
              Y+C A+      I+ +   T++V
Sbjct: 304 QTDYSCNARFHFTHTIQQKNPFTLKV 329


>gi|440891914|gb|ELR45352.1| Neurofascin, partial [Bos grunniens mutus]
          Length = 1272

 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 131/364 (35%), Positives = 190/364 (52%), Gaps = 10/364 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 251 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 309

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 310 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 368

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 369 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 428

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 429 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 487

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 488 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 547

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  + SLT+   +E D G YTC A TELD   A+A
Sbjct: 548 PSLKLAVSWLKDDEPLYISNR---MKKEEDSLTIFGVAERDQGSYTCVASTELDQDLAKA 604

Query: 395 TLTV 398
            LTV
Sbjct: 605 YLTV 608



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 153/664 (23%), Positives = 259/664 (39%), Gaps = 74/664 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 166 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 224

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 225 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 282

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 283 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 338

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE--TGDLKI-TDVA 278
            + PK+     G+   L CR  G PKP V W+ N + L            GD  I  D  
Sbjct: 339 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQ 398

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            +    Y C   N+ G    +  ++V +       P +  +        R +     S  
Sbjct: 399 ISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPI 458

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
            ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L V
Sbjct: 459 PTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV 517

Query: 399 QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIRELIV 457
           + P       T I  +   +       V  +    H    K+  +W + D    I   + 
Sbjct: 518 KDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLAVSWLKDDEPLYISNRMK 570

Query: 458 NKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 500
            + +S T                 TE+D+ +  +K +  VL         P+  ++ + P
Sbjct: 571 KEEDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLD-----QATPTNRLAAL-P 622

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560
           +G P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G   +   +  
Sbjct: 623 KGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKF-- 679

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGST 614
            P + ++ +  L P   Y+  +    + G    S      +     P  NP +V+G G+ 
Sbjct: 680 -PGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTR 738

Query: 615 PNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPY 674
            NN+ I+WT M       P+ +Y + WRR  T E WN  +V  W  S  V+   P + PY
Sbjct: 739 KNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQTPVYVPY 795

Query: 675 EIKV 678
           EI+V
Sbjct: 796 EIRV 799



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 102/228 (44%), Gaps = 23/228 (10%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP++   I+V+++    + WN V   +++
Sbjct: 795  YEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVK-IRVLNSTAISLQWNRVYSDTVQ 853

Query: 433  GHFRGYKVQTWTEKDGEGSIRELIVNK--------GESTTTEVDKFVPASKNFARVLAFN 484
            G  R Y+   W E      ++ L V++        G+     V +  P S     ++  N
Sbjct: 854  GQLREYRAYYWRES---SLLKNLWVSQKRQQAGFPGDRLRGVVSRLFPYSNYKLEMVVVN 910

Query: 485  GAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
            G  +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY +KY + 
Sbjct: 911  GRGDGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLKYVAF 970

Query: 545  KGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             GTKVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 971  NGTKVGKQIVENF----SPNQTKFTVQRADPVSRYRFSLSARTQVGSG 1014



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 116/289 (40%), Gaps = 29/289 (10%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
            L C   G P P   W  +G P+     NP+  ++    G ++I +  + S +  Y C  
Sbjct: 354 RLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVA----GDTIIFRDTQISSRAVYQCNT 409

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           SN  G   + +  +SVL  P   + P  + I          +C   G P P + W  NG+
Sbjct: 410 SNEHGYLLANAF-VSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ 468

Query: 165 PISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +    N    V  N  + I+ +RK D G Y C ATN LG     V + V      I  
Sbjct: 469 GSNLDGGN--YHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYR 525

Query: 224 APKDEYTVDGKTVVLTCRVFGAP--KPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
            P+D+    G TV L CRV   P  K  V+W+ + + L        E   L I  VA  D
Sbjct: 526 MPEDQVAKRGTTVQLECRVKHDPSLKLAVSWLKDDEPLYISNRMKKEEDSLTIFGVAERD 585

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHIT-----------DQPEDYEV 319
            G YTC A  +L        LTV +    T           D+P D E+
Sbjct: 586 QGSYTCVASTELDQDLAKAYLTVLDQATPTNRLAALPKGRPDRPRDLEL 634



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 117/297 (39%), Gaps = 30/297 (10%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGN 194
            + +  EC+A G P P  HW  N K   I++ P  + RR+ G   I   +  + +   G 
Sbjct: 55  RDNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGE 114

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNW 252
           Y C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W
Sbjct: 115 YQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFW 174

Query: 253 IHNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK--- 305
           + +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K   
Sbjct: 175 MSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLT 234

Query: 306 -----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
                E T     P+       V  G      C A   P+    I W +     D  S+ 
Sbjct: 235 TRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDK 290

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
              ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 291 AKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 347



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 84/208 (40%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L+  P IT+    ++ VD +  +++ C   G P P  +W  N K        R ++  
Sbjct: 34  NELSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRR 93

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------ED 316
                + D           GEY CFARNK GTA     L+ +    ++  P       + 
Sbjct: 94  RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 148

Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 149 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 204

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
           D    Y+C A+      I+ +   T++V
Sbjct: 205 DMQTDYSCNARFHFTHTIQQKNPFTLKV 232


>gi|432869236|ref|XP_004071687.1| PREDICTED: protein sidekick-2-like [Oryzias latipes]
          Length = 2301

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 183/602 (30%), Positives = 269/602 (44%), Gaps = 41/602 (6%)

Query: 47  RNKKVELFCIFGGTPLPQT--IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           RN+ + + C+    PL +    W KDGV ++   R    ++G+ L+I      D G Y C
Sbjct: 337 RNEAI-MECVANARPLVKMSITWRKDGVAVSTGIR----DFGRRLVISLPAVRDSGYYEC 391

Query: 105 EVSNGVGEAKSYSID--LSVLAAPYFTVEP-EFINAAEEETVTFECKASGLPEPEIHWVH 161
           E S       S +    L VL  P F  EP   I A  E+ V   C+A G P+PEI W  
Sbjct: 392 EASLRSSSVPSVTAGAYLHVLEYPLFIKEPPSHITAEMEKVVDIPCQARGTPQPEIVWYK 451

Query: 162 NGKPISQAP-PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
           +  PIS    P  R  VG   + I  L   DTG + C A N  G +  + Y+ V + AP 
Sbjct: 452 DAVPISPVKIPRYRVLVG-GSLQINGLLPDDTGMFQCFARNLAGEIQTNTYLAVTSIAPN 510

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKIT 275
           IT  P D   +DG +V+L C   GAP+P + W   ++ L  G     R+T+LE+G L I+
Sbjct: 511 ITAGPSDSAVIDGMSVILHCETAGAPRPAITWQKGERVLASGSVQQPRFTLLESGSLLIS 570

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
               +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A   C    DP
Sbjct: 571 PSHLSDAGTYTCMASNSRGIDEASADLVVWARTRITKPPQDQSVIKGTKAVMTCGVTHDP 630

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
           S+ +  VW +    ID  + PR     D +L ++++   D G YTCR  +        A 
Sbjct: 631 SVTVRHVWEKSGSVIDVNTSPRLRLDPDGTLHISQTWSGDIGTYTCRVTSVGGNDSRSAH 690

Query: 396 LTVQVPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGEGSI 452
           L V+    AP N   ++  I+ +   ++W     Q+  G+     Y ++  +E +   ++
Sbjct: 691 LRVRQLPHAPENPIAVLSTIEKRAINLTWA----QAFDGNSPLIHYILEV-SENNAPWTV 745

Query: 453 RELIVN-KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGT-VQS 509
             L+ N + EST   V   +PA     R+ A N    G  S E      PE  P    Q+
Sbjct: 746 --LLANIEPESTGVTVSGLIPARSYQFRLCAVNDVGRGQFSKETDRLTLPEEPPSAPPQT 803

Query: 510 LEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSA 567
           + A    + +  ++W  P +   NG L GY I+Y  + G    P+  ++  I++P  T+ 
Sbjct: 804 VIASGRTNQSIMIQWQPPPESHQNGPLQGYIIRY-CLSGL---PVDCQIKNITNPDQTNL 859

Query: 568 KLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLVISW 622
            L  L   T Y I +  Y  AG G  S       L  VP   P NV+        +  +W
Sbjct: 860 LLEDLIIWTNYEIEVGAYNGAGRGTYSHKVTEWTLQGVPTVPPGNVKAEAVNSTTVRFTW 919

Query: 623 TA 624
           +A
Sbjct: 920 SA 921



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 171/681 (25%), Positives = 262/681 (38%), Gaps = 69/681 (10%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           + Q V++ +   +   ++  F      P PQ  W +DG  I  S RI+      +L+I  
Sbjct: 227 RSQTVSQGEGALIHTPRIHSF------PKPQITWFRDGRKIPSSSRIAI-TLDNTLVILS 279

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFINAAEEETVT----- 144
               D G Y  + V++  GE K S  I L+V  +  P   + P  I   +  +VT     
Sbjct: 280 TVAPDAGRYYAQAVNDKNGENKTSQPITLTVENVGGPADPIAPSIIIPPKNTSVTVGRNE 339

Query: 145 --FECKASGLP--EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
              EC A+  P  +  I W  +G  +S       R  G  R+ I      D+G Y C A 
Sbjct: 340 AIMECVANARPLVKMSITWRKDGVAVSTG----IRDFG-RRLVISLPAVRDSGYYECEAS 394

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK 257
             ++S+  V    Y++VL +   I E P        K V + C+  G P+PE+ W  +  
Sbjct: 395 LRSSSVPSVTAGAYLHVLEYPLFIKEPPSHITAEMEKVVDIPCQARGTPQPEIVWYKDAV 454

Query: 258 ELTG---GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHITDQ 313
            ++     RY +L  G L+I  +   D+G + CFARN  G  Q +  L V     +IT  
Sbjct: 455 PISPVKIPRYRVLVGGSLQINGLLPDDTGMFQCFARNLAGEIQTNTYLAVTSIAPNITAG 514

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFES--EPRFVQSNDYSLTVTKS 371
           P D  V  G S    C     P  + +I W +G   +   S  +PRF      SL ++ S
Sbjct: 515 PSDSAVIDGMSVILHCETAGAP--RPAITWQKGERVLASGSVQQPRFTLLESGSLLISPS 572

Query: 372 SELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
              D+G YTC A       EA A L V              VI   KAV++         
Sbjct: 573 HLSDAGTYTCMASNSRGIDEASADLVVWARTRITKPPQDQSVIKGTKAVMTCGVT----- 627

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFA--------RVLAF 483
             H     V+   EK G      + VN       + D  +  S+ ++        RV + 
Sbjct: 628 --HDPSVTVRHVWEKSGS----VIDVNTSPRLRLDPDGTLHISQTWSGDIGTYTCRVTSV 681

Query: 484 NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQS 543
            G  +   + +     P      +  L  I     A  L W +    N  L+ Y ++  S
Sbjct: 682 -GGNDSRSAHLRVRQLPHAPENPIAVLSTIE--KRAINLTWAQAFDGNSPLIHYILEV-S 737

Query: 544 VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV--- 600
                   LL  +    +P +T   ++GL P+  Y+  L      G G  SK    +   
Sbjct: 738 ENNAPWTVLLANI----EPESTGVTVSGLIPARSYQFRLCAVNDVGRGQFSKETDRLTLP 793

Query: 601 ---PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLD 657
              P   P  V   G T  +++I W   PE   N P   Y I +            ++ +
Sbjct: 794 EEPPSAPPQTVIASGRTNQSIMIQWQPPPESHQNGPLQGYIIRYCLSGLPVDCQIKNITN 853

Query: 658 WRQSELVLANQPTFQPYEIKV 678
             Q+ L+L +   +  YEI+V
Sbjct: 854 PDQTNLLLEDLIIWTNYEIEV 874



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 140/578 (24%), Positives = 232/578 (40%), Gaps = 50/578 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY--GKSLIIKHVEFSDQGSYTCEV 106
           K V++ C   GTP P+ +W KD VPI+P  +I +     G SL I  +   D G + C  
Sbjct: 431 KVVDIPCQARGTPQPEIVWYKDAVPISPV-KIPRYRVLVGGSLQINGLLPDDTGMFQCFA 489

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPI 166
            N  GE ++ +       AP  T  P      +  +V   C+ +G P P I W    + +
Sbjct: 490 RNLAGEIQTNTYLAVTSIAPNITAGPSDSAVIDGMSVILHCETAGAPRPAITWQKGERVL 549

Query: 167 S----QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           +    Q P     + G   I+  +L  SD G Y C A+NS G       + V A    IT
Sbjct: 550 ASGSVQQPRFTLLESGSLLISPSHL--SDAGTYTCMASNSRGIDEASADLVVWART-RIT 606

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-----TGGRYTILETGDLKITDV 277
           + P+D+  + G   V+TC V   P   V  +  +        T  R  +   G L I+  
Sbjct: 607 KPPQDQSVIKGTKAVMTCGVTHDPSVTVRHVWEKSGSVIDVNTSPRLRLDPDGTLHISQT 666

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------EDYEVEAGQSATFRCN 330
              D G YTC   +  G    S  L V++  H  + P       E   +    +  F  N
Sbjct: 667 WSGDIGTYTCRVTSVGGNDSRSAHLRVRQLPHAPENPIAVLSTIEKRAINLTWAQAFDGN 726

Query: 331 A--------VSDPSLKLSIVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTC 381
           +        VS+ +   +++ L   EP     +    + +  Y   +   +++  GQ++ 
Sbjct: 727 SPLIHYILEVSENNAPWTVL-LANIEPESTGVTVSGLIPARSYQFRLCAVNDVGRGQFS- 784

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
               E D +    TL  + P  AP    +      +  ++ W P       G  +GY ++
Sbjct: 785 ---KETDRL----TLPEEPP-SAPPQTVIASGRTNQSIMIQWQPPPESHQNGPLQGYIIR 836

Query: 442 TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
                       + I N  + T   ++  +  +     V A+NGA  G  S  ++  T +
Sbjct: 837 YCLSGLPVDCQIKNITNP-DQTNLLLEDLIIWTNYEIEVGAYNGAGRGTYSHKVTEWTLQ 895

Query: 502 GVP----GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKI-KYQSVKGTKVGPLLERL 556
           GVP    G V++ EA+   +  F      P+  NG+  GYK+  ++  +  +V  +  R 
Sbjct: 896 GVPTVPPGNVKA-EAVNSTTVRFTWSAPSPQFINGINQGYKLLAWEPGRSNEVTVVTVR- 953

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           P   D +     ++GL+  T+Y   +  +T  GDG  S
Sbjct: 954 PNFQD-SVHVGHISGLKKYTEYFTSVLCFTTPGDGPRS 990



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 141/583 (24%), Positives = 229/583 (39%), Gaps = 60/583 (10%)

Query: 51   VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEV 106
            V L C   G P P   W K G  +  S  + Q  +      SL+I     SD G+YTC  
Sbjct: 526  VILHCETAGAPRPAITWQK-GERVLASGSVQQPRFTLLESGSLLISPSHLSDAGTYTCMA 584

Query: 107  SN--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--WVHN 162
            SN  G+ EA   S DL V A    T  P+  +  +       C  +  P   +   W  +
Sbjct: 585  SNSRGIDEA---SADLVVWARTRITKPPQDQSVIKGTKAVMTCGVTHDPSVTVRHVWEKS 641

Query: 163  GKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAP 219
            G  I     +PR ++ P+  + I      D G Y C  T+  G   +  ++ V  L HAP
Sbjct: 642  GSVI-DVNTSPRLRLDPDGTLHISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQLPHAP 700

Query: 220  EITEAPKDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTIL------ETGDL 272
            E   A     T++ + + LT  + F    P +++I    E     +T+L      E+  +
Sbjct: 701  ENPIAVLS--TIEKRAINLTWAQAFDGNSPLIHYILEVSE-NNAPWTVLLANIEPESTGV 757

Query: 273  KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS--ATFRCN 330
             ++ +  A S ++   A N +G  Q S     KE   +T  PE+      Q+  A+ R N
Sbjct: 758  TVSGLIPARSYQFRLCAVNDVGRGQFS-----KETDRLT-LPEEPPSAPPQTVIASGRTN 811

Query: 331  AV-------------SDPSLKLSIVWLRGSEPIDFE----SEPRFVQSNDYSLTVTKSSE 373
                           + P     I +     P+D +    + P         L +  + E
Sbjct: 812  QSIMIQWQPPPESHQNGPLQGYIIRYCLSGLPVDCQIKNITNPDQTNLLLEDLIIWTNYE 871

Query: 374  LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRG 433
            ++ G Y    +        + TL   VP   P N    + +++     +W+  SPQ + G
Sbjct: 872  IEVGAYNGAGRGTYSHKVTEWTLQ-GVPTVPPGNVK-AEAVNSTTVRFTWSAPSPQFING 929

Query: 434  HFRGYKVQTWTE-KDGEGSIRELIVNKGESTTT-EVDKFVPASKNFARVLAFNGAYNGPP 491
              +GYK+  W   +  E ++  +  N  +S     +      ++ F  VL F    +GP 
Sbjct: 930  INQGYKLLAWEPGRSNEVTVVTVRPNFQDSVHVGHISGLKKYTEYFTSVLCFTTPGDGPR 989

Query: 492  SEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP 551
            S      T E  PG V  L    +  ++  + W +P++ NG+L G++I ++    T    
Sbjct: 990  SPPQRLRTHEDTPGAVGHLSFTDILDTSLKVSWKEPQEKNGILTGFRISWEEFNRTNT-- 1047

Query: 552  LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
               R+ +     T   K+ GL   T Y I +A  T  G G  S
Sbjct: 1048 ---RVTHYLPNVTQEYKVTGLTALTTYTIQVAAMTSKGQGQLS 1087



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 125/302 (41%), Gaps = 49/302 (16%)

Query: 379  YTCRAQTELDFIEAQATLTVQVPLEA---PSNFTLI--QVIDAKKAVVSWNP----VSPQ 429
            +   AQT   + EA   L V     A   PS+   +  + + A++ ++SW P    +SP 
Sbjct: 1480 FRLTAQTRKGWGEAAEALVVTTEKRARPQPSSRPTVPQEEVQARQVLLSWEPGSDGLSP- 1538

Query: 430  SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
                  R Y VQ     DG  ++    V+  ES +  VD+  P +    RV A N   + 
Sbjct: 1539 -----IRYYTVQYKELPDGNWTVHSASVSH-ESHSYMVDRLKPFTSYQFRVKATNDIGDS 1592

Query: 490  PPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQ 542
              SE    +T     P+  P     L   P  +++  ++W  P  E  NGVL+G++++Y+
Sbjct: 1593 EYSEESEAITTLQDAPDKAPTV---LSVTPHTTTSVLMRWQLPSEEHINGVLLGFRVRYR 1649

Query: 543  SVKGTKVGPLLERL-------------PY----ISDPTTTSAKLAGLEPSTKYRIHLAGY 585
             +   ++     R              PY    +S+ T T  +L  L    +Y I L+ Y
Sbjct: 1650 ELHYDRLRSFSVRTVNSPAANWADLSAPYSIRNLSESTLTQYELDNLSKHKRYEIRLSVY 1709

Query: 586  TKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI- 639
               G+G  S  + +F    VP   P NV  + ST   L ++W   P    N     Y+I 
Sbjct: 1710 NAVGEGPSSAPQEVFVGEAVPTAPPQNVVVQSSTATQLDVTWDPPPLDAQNGDIQGYKIY 1769

Query: 640  FW 641
            FW
Sbjct: 1770 FW 1771



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 131/314 (41%), Gaps = 36/314 (11%)

Query: 126 PYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
           PYF +EP       E   +   C A G    E  W++NG  ++       R     R  I
Sbjct: 133 PYFKMEPPQTQVHLEGNRLVLTCMAEGSWPLEFKWIYNGTELT-------RFSLEYRYLI 185

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVF 243
            +L K   G+Y C   N +G + +      +A+     E  + +    G+  ++ T R+ 
Sbjct: 186 PSLDKLHAGHYRCIVRNRVGAIMQCSTEVQVAYMNGFVEGERSQTVSQGEGALIHTPRIH 245

Query: 244 GAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSG- 300
             PKP++ W  + +++ +  R  I     L I      D+G Y   A N K G  + S  
Sbjct: 246 SFPKPQITWFRDGRKIPSSSRIAITLDNTLVILSTVAPDAGRYYAQAVNDKNGENKTSQP 305

Query: 301 -SLTVKEHTHITD--------QPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEPI 350
            +LTV+      D         P++  V  G++ A   C A + P +K+SI W +     
Sbjct: 306 ITLTVENVGGPADPIAPSIIIPPKNTSVTVGRNEAIMECVANARPLVKMSITWRK----- 360

Query: 351 DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA---QTELDFIEAQATLTV-QVPL---E 403
           D  +    ++     L ++  +  DSG Y C A    + +  + A A L V + PL   E
Sbjct: 361 DGVAVSTGIRDFGRRLVISLPAVRDSGYYECEASLRSSSVPSVTAGAYLHVLEYPLFIKE 420

Query: 404 APSNFT--LIQVID 415
            PS+ T  + +V+D
Sbjct: 421 PPSHITAEMEKVVD 434



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 82/202 (40%), Gaps = 13/202 (6%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N +      +   +V W  V      G   GYKV  + EKD + +     V  
Sbjct: 1305 VPSSGPTNVSAFATT-SSSILVRWGEVPAADRNGLILGYKV-VYKEKDSDSAPSFWAVEG 1362

Query: 460  GESTTTEVDKFVPASKNFARVLAF----NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPL 515
              S + ++           +VLAF    +G  + PP   I   T + VPG    +    +
Sbjct: 1363 NTSHSVQLTSLGKYILYEIQVLAFTRIGDGKTSLPP---ILERTLDDVPGPPVGILFPEV 1419

Query: 516  GSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
             +++  L W  P QPNG+++ Y+I ++          ++ L     P+T      GL+P 
Sbjct: 1420 RTNSVRLIWQPPAQPNGIILAYQIIFRRNSSNSNAATVDVL----SPSTRQYTATGLKPE 1475

Query: 576  TKYRIHLAGYTKAGDGAESKYL 597
              Y   L   T+ G G  ++ L
Sbjct: 1476 MVYVFRLTAQTRKGWGEAAEAL 1497



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 6/145 (4%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW--TEKDGEGSIRELIV 457
            VP   P N  ++Q   A +  V+W+P    +  G  +GYK+  W    ++    +R L +
Sbjct: 1729 VPTAPPQNV-VVQSSTATQLDVTWDPPPLDAQNGDIQGYKIYFWEFQLQNETERLRTLFL 1787

Query: 458  NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS 517
             +      ++      +     V AFN A +GP S      T +  P     +    L +
Sbjct: 1788 PE---LGVKLKNLTGYTTYMISVAAFNAAGDGPRSLPTRGRTQQAAPSAPSYIHFSELTT 1844

Query: 518  SAFYLKWVKPEQPNGVLMGYKIKYQ 542
            ++  + W +P+Q NG++ GY++ Y+
Sbjct: 1845 TSVNVSWGEPKQANGIIEGYRLVYE 1869



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 77/363 (21%), Positives = 143/363 (39%), Gaps = 60/363 (16%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  +     T + Q +L    + +T++  VP E P   T + + +          
Sbjct: 1065 LTALTTYTIQVAAMTSKGQGQL----SASTISSGVPPELPGPPTNLGISN---------- 1110

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE--------LIVNKGESTTTEVDKFVP 472
            + P+S+   F+ GY  +T    W  +   G I E         +VN+ ++ + EV    P
Sbjct: 1111 IGPRSITLQFKPGYDGKTSISRWLVEAQIGIIGENEEWLVVHQLVNEPDARSLEVLDLNP 1170

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP-----------LGSSAFY 521
             +    R+   N         I+    P      +Q+L+A P              ++ +
Sbjct: 1171 YTFYRFRMRQVN---------IVGSSLPSQPSRKIQTLQAPPDISPANVTLRTASETSLW 1221

Query: 522  LKWVK-PE---QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTK 577
            L+WV  PE     N   +GY+I+Y    G+K G L      I D       +  LE  T+
Sbjct: 1222 LRWVPLPEWEYNGNPDHVGYRIQYCKA-GSKGGVLFH---VIMDRLEREFTIEDLEEWTE 1277

Query: 578  YRIHLAGYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNA 632
            Y + +      G G  S+ +       VP   P NV    +T +++++ W  +P  + N 
Sbjct: 1278 YEVRVQAVNGIGSGPWSQAVHGRTRESVPSSGPTNVSAFATTSSSILVRWGEVPAADRNG 1337

Query: 633  PHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIR 692
                Y++ ++  ++  A +   V       + L +   +  YEI+V+      DG+ S+ 
Sbjct: 1338 LILGYKVVYKEKDSDSAPSFWAVEGNTSHSVQLTSLGKYILYEIQVLAFTRIGDGKTSLP 1397

Query: 693  ELI 695
             ++
Sbjct: 1398 PIL 1400


>gi|449280044|gb|EMC87436.1| Neurofascin [Columba livia]
          Length = 1372

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 139/404 (34%), Positives = 206/404 (50%), Gaps = 21/404 (5%)

Query: 37  YVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEF 96
           Y T   ++ LR   + L CI  G P P  +W K G  + P+ +    N+ K+L I +V  
Sbjct: 268 YGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGGEL-PAGKTKLENFNKALRISNVSE 326

Query: 97  SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE 156
            D G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P 
Sbjct: 327 EDSGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPQNLILAPGEDGRLVCRANGNPKPA 385

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           I W+ NG+PI  +PPNP R+V  + I   + +   +  Y CNA+N  GY+  + +V+VL 
Sbjct: 386 IQWLVNGEPIEASPPNPSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLD 445

Query: 217 HAPEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDL 272
             P I  AP+++    +      L C  FG+P P + W  N +   L GG Y   E G L
Sbjct: 446 VPPRIL-APRNQLIKVIQNNRTRLDCPFFGSPIPTLRWFKNGQGNTLDGGNYKAHENGSL 504

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV 332
           ++      D G YTC A N LG A+    L VK+ T I   PED  V+ G      C   
Sbjct: 505 EMNMARKEDQGIYTCVATNILGKAEAQVRLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVK 564

Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
            DP+LKL++ WL+   P+   +    ++  D  LT+   +E D G YTC A TELD   A
Sbjct: 565 HDPTLKLTVTWLKDEAPLYIGNR---MKKEDDGLTIFGVAEKDQGDYTCVASTELDKDLA 621

Query: 393 QATLTV---------QVPLEAPSNFTLIQVID-AKKAV-VSWNP 425
           +A LTV         ++P E P     +++ D A+++V ++W P
Sbjct: 622 KAYLTVLAIPANRSRELPKERPDRPRDLELTDLAERSVRLTWIP 665



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 155/681 (22%), Positives = 260/681 (38%), Gaps = 93/681 (13%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI+   R+SQG  G  L   +V   D Q  Y+C      ++ + +
Sbjct: 168 GLPSPVIFWMSSSMEPIHQDKRVSQGQNG-DLYFSNVMLQDAQTDYSCNARFHFTHTIQQ 226

Query: 113 AKSYSIDLSV---------------------------LAAPYFTVEPEFINAAEEETVTF 145
              Y++ +                                PY T   + +    +  +  
Sbjct: 227 KNPYTLKVKTKKPHNETSLRNHTGMYSARGITETTPSFMYPYGTSSSQMVLRGVD--LLL 284

Query: 146 ECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLG 204
           EC ASG+P P+I W   G    + P    +    N+ + I N+ + D+G Y C A+N +G
Sbjct: 285 ECIASGVPAPDIMWYKKG---GELPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMG 341

Query: 205 YVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGG 262
            +   + V V A AP   + P++     G+   L CR  G PKP + W+ N +  E +  
Sbjct: 342 SIRHTISVRVKA-APYWLDEPQNLILAPGEDGRLVCRANGNPKPAIQWLVNGEPIEASPP 400

Query: 263 RYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA 321
             +    GD +   D     S  Y C A N+ G    +  ++V +       P +  ++ 
Sbjct: 401 NPSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRILAPRNQLIKV 460

Query: 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTC 381
            Q+   R +     S   ++ W +  +    +        N  SL +  + + D G YTC
Sbjct: 461 IQNNRTRLDCPFFGSPIPTLRWFKNGQGNTLDGGNYKAHENG-SLEMNMARKEDQGIYTC 519

Query: 382 RAQTELDFIEAQATLTVQVPLE--------------APSNFTLIQVIDAKKAVVSW-NPV 426
            A   L   EAQ  L V+ P                 P     ++     K  V+W    
Sbjct: 520 VATNILGKAEAQVRLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDE 579

Query: 427 SPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGEST---TTEVDKFVPASKNFARVLAF 483
           +P  +    +        E DG         ++G+ T   +TE+DK +  +K +  VLA 
Sbjct: 580 APLYIGNRMK-------KEDDGLTIFGVAEKDQGDYTCVASTELDKDL--AKAYLTVLAI 630

Query: 484 NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQS 543
                       S   P+  P   + LE   L   +  L W+  +  N  +  Y ++++ 
Sbjct: 631 PANR--------SRELPKERPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYIVQFEE 682

Query: 544 VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES----KYLF- 598
            +  + G       Y   P + ++ +  L P   Y+  +      G    S    +Y   
Sbjct: 683 DR-FQPGMWHNHSRY---PGSVNSAVLSLSPYVNYQFRVIAVNDVGSSLPSVPSERYQTN 738

Query: 599 -YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLD 657
              P  NP  V+G G+  NN+ I+WT +   +   P+ +Y + WRR +   +W  + V  
Sbjct: 739 GARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDIRGSWYNETVKT 798

Query: 658 WRQSELVLANQPTFQPYEIKV 678
            R    V+ N P + PYEIKV
Sbjct: 799 ARH---VVWNTPIYVPYEIKV 816



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 104/234 (44%), Gaps = 26/234 (11%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  + Q E DF  A    T         P  AP++   I+V+++    ++W  V   +++
Sbjct: 812  YEIKVQAENDFGRAPEPDTFIGYSGEDYPKAAPTDVR-IRVLNSTAVALTWTRVHLDTIQ 870

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  + Y+   W +     ++     R+ +   G+     V +  P S     ++  NG  
Sbjct: 871  GQLKEYRAYFWRDSSLLKNLWVSKKRQYVSFPGDRNRGIVSRLFPYSNYKLEMVVTNGRG 930

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQS---- 543
            +GP SE+  F TPEGVP + + L        +  L+W  PE PNGVL GY ++YQ+    
Sbjct: 931  DGPRSEVKEFPTPEGVPSSPRYLRIRQPNLESINLEWDHPEHPNGVLTGYSLRYQASTTT 990

Query: 544  -----VKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
                 V G+K G  L+E       P  T   L   +P ++YR  L   T+ G+G
Sbjct: 991  CLSSPVNGSKTGRTLVENF----SPNQTRFTLQRTDPISRYRFFLRARTQVGEG 1040



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 91/219 (41%), Gaps = 31/219 (14%)

Query: 215 LAHAPEITEAPKDEYTVDGKT-VVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLK 273
           L   P IT+    +Y VD +  + + C   G P P  +W  N K     +   +      
Sbjct: 38  LPQPPTITKQSVKDYIVDPRDDIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRS 97

Query: 274 ITDVAFADS--------GEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------EDYE 318
            T V    S        GEY CFARN  GTA     L+ K H  ++  P       +  E
Sbjct: 98  GTLVIDFHSGGRPEDYEGEYQCFARNDYGTA-----LSSKIHLQVSKSPLWPKEKVDVIE 152

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSND--YSLTVTKSSEL 374
           V+ G   + +CN    P L   ++ W+  S EPI  +      Q+ D  +S  + + ++ 
Sbjct: 153 VDEGAPLSLQCNP--PPGLPSPVIFWMSSSMEPIHQDKRVSQGQNGDLYFSNVMLQDAQT 210

Query: 375 DSGQYTCRAQTELDF-IEAQATLTVQVPLEAPSNFTLIQ 412
           D   Y+C A+      I+ +   T++V  + P N T ++
Sbjct: 211 D---YSCNARFHFTHTIQQKNPYTLKVKTKKPHNETSLR 246



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 127/319 (39%), Gaps = 59/319 (18%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSDT--GNY 195
           + +  EC+A G P P   W  NGK   +++ P  + RR+ G   I   +  + +   G Y
Sbjct: 58  DDIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHSGGRPEDYEGEY 117

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCR-VFGAPKPEVNW- 252
            C A N  G          ++ +P   +   D   VD G  + L C    G P P + W 
Sbjct: 118 QCFARNDYGTALSSKIHLQVSKSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPSPVIFWM 177

Query: 253 ------IHNQKELTGGRYTILETGDLKITDVAFADS-GEYTCFARN-------------- 291
                 IH  K ++ G     + GDL  ++V   D+  +Y+C AR               
Sbjct: 178 SSSMEPIHQDKRVSQG-----QNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTL 232

Query: 292 KLGTAQGSGSLTVKEHT------HITDQPEDYEVEAGQSAT----------FRCNAVSDP 335
           K+ T +     +++ HT       IT+    +    G S++            C A   P
Sbjct: 233 KVKTKKPHNETSLRNHTGMYSARGITETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVP 292

Query: 336 SLKLSIVWL-RGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +    I+W  +G E     +    +++ + +L ++  SE DSG+Y C A  ++  I    
Sbjct: 293 A--PDIMWYKKGGE---LPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTI 347

Query: 395 TLTVQVP---LEAPSNFTL 410
           ++ V+     L+ P N  L
Sbjct: 348 SVRVKAAPYWLDEPQNLIL 366


>gi|410304160|gb|JAA30680.1| neurofascin [Pan troglodytes]
          Length = 613

 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/364 (36%), Positives = 190/364 (52%), Gaps = 10/364 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 246 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 304

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 305 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 363

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 364 WMVNGEPLQLAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 423

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 424 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 482

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 483 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 542

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 543 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 599

Query: 395 TLTV 398
            LTV
Sbjct: 600 YLTV 603



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 142/363 (39%), Gaps = 28/363 (7%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 220 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 277

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G      P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 278 G---GDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 333

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI-TDVA 278
            + PK+     G+   L CR  G PKP V W+ N +  +L          GD  I  D  
Sbjct: 334 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQLAPPNPNREVAGDTIIFRDTQ 393

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            +    Y C   N+ G    +  ++V +       P +  +        R +     S  
Sbjct: 394 ISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPI 453

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
            ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L V
Sbjct: 454 PTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV 512

Query: 399 QVP 401
           + P
Sbjct: 513 KDP 515



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 19/210 (9%)

Query: 15  ILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI 74
           +L N   + +       +P+ Q +     V L N+   L C F G+P+P   W K+G   
Sbjct: 411 LLANAFVSVLDVPPRMLSPRNQLI----RVILYNR-TRLDCPFFGSPIPTLRWFKNGQGS 465

Query: 75  NPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV 130
           N    +  GNY      SL IK +   DQG YTC  +N +G+A++  + L V        
Sbjct: 466 N----LDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAEN-QVRLEVKDPTRIYR 520

Query: 131 EPEFINAAEEETVTFECKASGLPEPE--IHWVHNGKPISQAPPNPRRKVGPNRITIENLR 188
            PE   A    TV  EC+    P  +  + W+ + +P+       R K   + +TI  + 
Sbjct: 521 MPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN---RMKKEDDSLTIFGVA 577

Query: 189 KSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           + D G+Y C A+  L       Y+ VL + 
Sbjct: 578 ERDQGSYTCVASTELDQDLAKAYLTVLGNC 607



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 117/297 (39%), Gaps = 30/297 (10%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGN 194
            + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G 
Sbjct: 50  RDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEGYEGE 109

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNW 252
           Y C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W
Sbjct: 110 YQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFW 169

Query: 253 IHNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK--- 305
           + +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K   
Sbjct: 170 MSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLT 229

Query: 306 -----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
                E T     P+       V  G      C A   P+    I W +     D  S+ 
Sbjct: 230 TRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDK 285

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
              ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 286 AKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 342



 Score = 45.8 bits (107), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 83/206 (40%), Gaps = 29/206 (14%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQK--------ELTGGRYT 265
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +         ++  R +
Sbjct: 31  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------EDYE 318
                D +         GEY CFARNK GTA     L+ +    ++  P       +   
Sbjct: 91  GTLVIDFRSGGRPEGYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDF-IEAQATLTVQV 400
              Y+C A+      I+ +   T++V
Sbjct: 202 QTDYSCNARFHFTHTIQQKNPFTLKV 227


>gi|348526542|ref|XP_003450778.1| PREDICTED: neuronal cell adhesion molecule-like [Oreochromis
            niloticus]
          Length = 1508

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 206/710 (29%), Positives = 311/710 (43%), Gaps = 61/710 (8%)

Query: 39   TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
            T   ++ LR + +EL CI  G P P   W K+G  + PS+R+S  N+ K+L I  V  +D
Sbjct: 459  TTSTKMVLRGQTLELECIAEGLPTPDISWQKEGGEL-PSNRVSYHNFKKTLKISDVNEND 517

Query: 99   QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
             G+Y C  +N +G    ++I ++V AAP++   P  +  A  ET    C+ +G P+P I 
Sbjct: 518  AGNYRCVATNNLGTIH-HTIKVTVKAAPFWVSIPRNLILAPNETGVLTCRVNGEPKPRID 576

Query: 159  WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
            W  NG PI   P +P RKV  + + + N++   +  Y CNA+N  GY+  + +V+VLA  
Sbjct: 577  WFVNGIPIENTPEDPSRKVEDDTVILSNVQSGSSAVYQCNASNEFGYLLANAFVSVLAEP 636

Query: 219  PEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQKELTGGR--YTILETGDLKIT 275
            P +   P   Y V      +L C  FG+P P + W  + +        Y I E G L+I 
Sbjct: 637  PRVLTPPNQVYQVITNSPALLHCASFGSPIPTITWFKDSQISIRNTDPYVIHENGTLEIN 696

Query: 276  DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
                 +SG+YTC A N LG  +    L VKE T I  QPE   V+ G SA F C    DP
Sbjct: 697  VAQPLNSGKYTCIATNNLGIKENHVFLEVKEPTRILKQPEYKVVQRGMSAVFECKVKHDP 756

Query: 336  SLKLSIVWL--RGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393
            SL  ++ WL  RG  P D     RF    D SLT+   ++ D G YTC   T LD   A 
Sbjct: 757  SLIPTMTWLKDRGELPDD----ERFEVDAD-SLTIRDVTDDDKGTYTCIMNTTLDQDSAS 811

Query: 394  ATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
            A LTV    + P++  L    + +   ++W P    +       + +Q        G   
Sbjct: 812  AMLTVVEKPDPPTDLELTDQTE-RSVQLTWTPGDENN--SPIEKFVIQYGDLLHQPGVWT 868

Query: 454  ELIVNKGESTTTEVDKFVPASKNFARVLAFNG-AYNGPPSEIISFVT----PEGVPGTVQ 508
             L    G STT ++    P      RVLA N   Y+ P      + T    P+  P  VQ
Sbjct: 869  NLTEVPGTSTTAQL-HLSPYVYYSFRVLAKNRVGYSEPSQSSRQYRTNPAAPDENPSGVQ 927

Query: 509  SLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
             +   P G+       +   Q NG  + YK++++          +E+     +    S  
Sbjct: 928  GVGTEP-GNLVISWTPLTGLQSNGPGLEYKVQWRQKD-------VEKEWSAQNVANVSQW 979

Query: 569  LAGLEPS-TKYRIHLAGYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISW 622
            +    P+   Y I +  +   G G E +         +P   P++++          + W
Sbjct: 980  VVSGTPTYVPYEIKVQAFNDYGVGPEPEVAIGYSGEDLPLSAPESIQVMVHNSTLAEVHW 1039

Query: 623  TAMPEIEHNAPHFKYRIFWRR----HNTGEAWNQD-DVLDW--RQSELVLANQPTFQPYE 675
              +           Y++++RR    H T E  +Q+  VL +   +SE  L   P  QPY 
Sbjct: 1040 EPISPPSVRGKLQGYKVYYRRKHGLHETEEETDQEMQVLTFSGNRSEGRL---PGLQPYS 1096

Query: 676  IKVVQTWTEKDGEGSIRELIVNKGE-----STTTEVDKFVPASKNFARVL 720
            +  +          SIR ++ NKGE     S T E  + VP   +F  V+
Sbjct: 1097 VYSL----------SIR-VLNNKGEGPSSQSKTFETPEGVPGPPSFLNVI 1135



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 99/202 (49%), Gaps = 17/202 (8%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV---------QTWTEKDGEG 450
            +PL AP +  ++ V ++  A V W P+SP S+RG  +GYKV         +T  E D E 
Sbjct: 1017 LPLSAPESIQVM-VHNSTLAEVHWEPISPPSVRGKLQGYKVYYRRKHGLHETEEETDQEM 1075

Query: 451  SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSL 510
             +     N+ E     +    P S     +   N    GP S+  +F TPEGVPG    L
Sbjct: 1076 QVLTFSGNRSEG---RLPGLQPYSVYSLSIRVLNNKGEGPSSQSKTFETPEGVPGPPSFL 1132

Query: 511  EAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKL 569
              I  G  +  L+W  P   NG L GY +KYQ V  T ++GP ++ + ++++ TT +  L
Sbjct: 1133 NVINPGLDSLTLEWGPPINNNGRLTGYILKYQPVNNTSELGP-VQFMTFLANETTIT--L 1189

Query: 570  AGLEPSTKYRIHLAGYTKAGDG 591
            + L  S  Y+ +L+  T  G G
Sbjct: 1190 SNLNSSMLYKFYLSAKTNKGSG 1211



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 113/298 (37%), Gaps = 35/298 (11%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIE---NLRKSDTGNYG 196
           E +   C+A G P P   W  NG     +       K G   + I+      ++  G Y 
Sbjct: 265 ENIVIHCEAKGKPHPSFSWTRNGTHFDVEKDSKVLMKPGSGTLVIDISSERAEAYEGTYQ 324

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCR-VFGAPKPEVNWIH 254
           C A N  G    D  V   + +P  ++   +   V  G ++VL CR   G P P + W+ 
Sbjct: 325 CIANNEHGTAVSDSIVIRQSRSPLWSKERNEAIMVQKGVSLVLQCRPPAGLPPPVIFWMD 384

Query: 255 N--QKELTGGRYTILETGDLKITDVAFADS-GEYTCFAR-NKLGTAQGSGSLTVKEHTHI 310
           N  QK     R +    GDL  ++V   D+  +Y C+AR     T Q    ++V   T +
Sbjct: 385 NNFQKLPLDKRVSQALNGDLYFSNVLPEDTRSDYICYARFPHTQTIQQKQPISV---TVL 441

Query: 311 TDQPEDYE---------------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE 355
              PE                  V  GQ+    C A   P+  +S     G  P +  S 
Sbjct: 442 DSSPEGERRPGFMLPLGTTSTKMVLRGQTLELECIAEGLPTPDISWQKEGGELPSNRVSY 501

Query: 356 PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             F +    +L ++  +E D+G Y C A   L  I     +TV+     +  P N  L
Sbjct: 502 HNFKK----TLKISDVNENDAGNYRCVATNNLGTIHHTIKVTVKAAPFWVSIPRNLIL 555


>gi|395531224|ref|XP_003767682.1| PREDICTED: neurofascin [Sarcophilus harrisii]
          Length = 1355

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 195/373 (52%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + P+ ++   N+ K+L I +V   D
Sbjct: 251 TSSSQMVLRGMDLLLECIASGVPAPDIAWYKKGGDL-PAGKVKFENFNKALRITNVSEED 309

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 310 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 368

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG P+  APPNP R+V  + I   + +   +  Y CNA+N  GY+  + +V+VL   
Sbjct: 369 WLVNGDPLEVAPPNPSREVAGDTIIFRDTQIGSSAVYQCNASNDHGYLLANAFVSVLDVP 428

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L++
Sbjct: 429 PRML-SPRNQLIKVIHYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYQVHENGSLEM 487

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
           T     D G YTC A N LG A+    L VK+ T I   PED  V+ G +    C    D
Sbjct: 488 TMARKEDQGIYTCVATNILGKAENQVRLEVKDPTRIIRVPEDQVVKRGSNVVLECRVKHD 547

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           P+LKL++ WL+  EP+   +    ++  + +LT+   ++ D G YTC A TELD   A+A
Sbjct: 548 PTLKLTVNWLKDDEPLYIGNR---MKKEEDTLTIFGVADRDQGSYTCMASTELDRDIAKA 604

Query: 395 TLTVQVPLEAPSN 407
            LTV     AP+N
Sbjct: 605 YLTVLAAQVAPTN 617



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 159/667 (23%), Positives = 258/667 (38%), Gaps = 79/667 (11%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PIN   R+SQG  G  L   +V   D +  Y+C      ++ + +
Sbjct: 166 GLPSPVIFWMSSSMEPINQDKRVSQGQNG-DLYFSNVMLQDAKTDYSCNARFHFTHTIQQ 224

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 225 KNPFTLKVLTTRGVSERTPSFMYPLGTSSSQMVLRGMD--LLLECIASGVPAPDIAWYKK 282

Query: 163 GKPISQAPPNPRRKVG----PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           G  +      P  KV        + I N+ + D+G Y C A+N +G +   + V V A A
Sbjct: 283 GGDL------PAGKVKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-A 335

Query: 219 PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI-T 275
           P   + PK+     G+   L CR  G PKP V W+ N    E+     +    GD  I  
Sbjct: 336 PYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWLVNGDPLEVAPPNPSREVAGDTIIFR 395

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           D     S  Y C A N  G    +  ++V +       P +  ++       R +     
Sbjct: 396 DTQIGSSAVYQCNASNDHGYLLANAFVSVLDVPPRMLSPRNQLIKVIHYNRTRLDCPFFG 455

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
           S   ++ W +  +  + +     V  N  SL +T + + D G YTC A   L   E Q  
Sbjct: 456 SPIPTLRWFKNGQGSNLDGGNYQVHENG-SLEMTMARKEDQGIYTCVATNILGKAENQVR 514

Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIREL 455
           L V+ P       T I  +   + V   + V  +    H    K+     KD E      
Sbjct: 515 LEVKDP-------TRIIRVPEDQVVKRGSNVVLECRVKHDPTLKLTVNWLKDDEPLYIGN 567

Query: 456 IVNKGEST------------------TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
            + K E T                  +TE+D+ +  +K +  VLA   A   P + +   
Sbjct: 568 RMKKEEDTLTIFGVADRDQGSYTCMASTELDRDI--AKAYLTVLA---AQVAPTNRMAPL 622

Query: 498 VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLP 557
             P+  P   + LE   L   +  L W+  +  N  +  Y ++++     +  P +    
Sbjct: 623 --PKERPDPPRDLELTDLEERSVRLTWIPGDDNNSPITEYIVQFEE---DQFQPGVWH-S 676

Query: 558 YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGR 611
           +   P + ++ +  L P   Y+  +      G    S      +     P  NP +V+G 
Sbjct: 677 HSKHPGSVNSAVLQLSPYVNYQFRVIAVNDVGSSHPSIPSERYRTSGAPPESNPGDVKGA 736

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
           GS  NN+ I+WT M       P+ +Y + WRR    E+WN   V  W  S  +++  P +
Sbjct: 737 GSRKNNMEITWTPMNATSAFGPNLRYIVKWRRREGRESWNNATV--W-GSRYMVSPTPVY 793

Query: 672 QPYEIKV 678
            PYEI+V
Sbjct: 794 VPYEIRV 800



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 96/225 (42%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP++   ++V+++    + WN V   +++
Sbjct: 796  YEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVK-VRVLNSTAIGLQWNRVYLDTVQ 854

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W E      +     R+      +     V    P S     ++  NG  
Sbjct: 855  GQLREYRAYFWRESSLLKGLWVSQKRQFASFSSDRARGVVSSLFPYSNYKLEMVVVNGRG 914

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE+  F TPEGVP   +             L+W  PE PNG+L GY +KY +  GT
Sbjct: 915  DGPRSEVKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILTGYNLKYLAFNGT 974

Query: 548  KVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K G  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 975  KTGKAVIETF----SPNQTKFSIQRADPVSRYRFSLSARTQVGPG 1015



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 120/297 (40%), Gaps = 32/297 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPPNPR----RKVGPNRITIENLRKSD--TGN 194
           + +  EC+A G P P   W  N +  + A  +PR    R+ G   I   +  + +   G 
Sbjct: 56  DNILIECEAKGNPAPSFQWTRNSRFFNVA-KDPRVSMFRRSGTLVIDFRSGGRPEEYEGE 114

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNW 252
           Y C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W
Sbjct: 115 YQCFARNKFGTAVSNRIFLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFW 174

Query: 253 IHNQKELTG--GRYTILETGDLKITDVAFADSG-EYTCFARNKLG-TAQGSGSLTVKEHT 308
           + +  E      R +  + GDL  ++V   D+  +Y+C AR     T Q     T+K  T
Sbjct: 175 MSSSMEPINQDKRVSQGQNGDLYFSNVMLQDAKTDYSCNARFHFTHTIQQKNPFTLKVLT 234

Query: 309 H--ITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
              ++++   +    G S++            C A   P+    I W +     D  +  
Sbjct: 235 TRGVSERTPSFMYPLGTSSSQMVLRGMDLLLECIASGVPA--PDIAWYKKGG--DLPAGK 290

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
              ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 291 VKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 347



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 31/209 (14%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L+  P IT+     Y VD +  +++ C   G P P   W  N +        R ++  
Sbjct: 34  NELSQPPTITKQSVKNYIVDPRDNILIECEAKGNPAPSFQWTRNSRFFNVAKDPRVSMFR 93

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------ED 316
                + D           GEY CFARNK GTA     ++ +    ++  P       + 
Sbjct: 94  RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----VSNRIFLQVSKSPLWPKENLDP 148

Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSND--YSLTVTKSS 372
             V+ G   T +CN    P L   ++ W+  S EPI+ +      Q+ D  +S  + + +
Sbjct: 149 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPINQDKRVSQGQNGDLYFSNVMLQDA 206

Query: 373 ELDSGQYTCRAQTELDF-IEAQATLTVQV 400
           + D   Y+C A+      I+ +   T++V
Sbjct: 207 KTD---YSCNARFHFTHTIQQKNPFTLKV 232


>gi|395818872|ref|XP_003782836.1| PREDICTED: neuronal cell adhesion molecule [Otolemur garnettii]
          Length = 1285

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/393 (33%), Positives = 200/393 (50%), Gaps = 19/393 (4%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           LR   + L CI  G P P   W K+   + P +R+S  N+ K+L I HV  +D G+Y C 
Sbjct: 283 LRGNVLSLECIAEGLPTPIIHWIKEDGTL-PVNRMSYKNFKKTLQITHVSEADSGNYQCI 341

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             N +G A  ++I ++V AAPY+ + P+ +  +  E  T  C+A+G P+P I W+ NG P
Sbjct: 342 AKNALG-AIHHTISVTVKAAPYWIMAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVP 400

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +  +P +P RK+  + I   N+++  +  Y CNA+N  GY+  + ++NVLA  P I    
Sbjct: 401 VEISPEDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFINVLAEPPRILTPT 460

Query: 226 KDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFADS 282
              Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I       +
Sbjct: 461 NTLYQVIANRPALLDCAFFGSPLPTIEWFKGTKGSALREDIYILHENGTLEIPVAQKDST 520

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC ARNKLG A+    L +K+ T I  QPE   V+ G + +F C    D +L L++ 
Sbjct: 521 GTYTCVARNKLGMAKNEVHLEIKDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTLTVT 580

Query: 343 WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPL 402
           WL+ +   +   + RF    D+ L +   ++ DSG YTC A T LD + A A L+V  P 
Sbjct: 581 WLKDNG--ELPDDDRFTIEKDH-LVIADVTDDDSGTYTCVANTTLDNVSASAVLSVVAPT 637

Query: 403 EAPS----------NFTLIQVIDAKKAVVSWNP 425
             P+          +  L   +D K   +SW P
Sbjct: 638 PTPAPVYDVPNPPFDLELTNQLD-KSVQLSWTP 669



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 154/600 (25%), Positives = 257/600 (42%), Gaps = 64/600 (10%)

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEE----TVTFECKASGLPEPEIHWVH 161
           ++  + + + YS   S    P F + PE   + +EE     ++ EC A GLP P IHW+ 
Sbjct: 248 IAANLSDTEFYSAKSSRERPPTF-LTPEGNASNKEELRGNVLSLECIAEGLPTPIIHWIK 306

Query: 162 NGK--PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
                P+++      +K     + I ++ ++D+GNY C A N+LG ++  + V V A AP
Sbjct: 307 EDGTLPVNRMSYKNFKKT----LQITHVSEADSGNYQCIAKNALGAIHHTISVTVKA-AP 361

Query: 220 EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TD 276
               AP++     G+   L CR  G PKP ++W+ N    E++    +    GD  I ++
Sbjct: 362 YWIMAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPVEISPEDPSRKIDGDTIIFSN 421

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED--YEVEAGQSATFRCNAVSD 334
           V    S  Y C A N+ G    +  + V         P +  Y+V A + A   C     
Sbjct: 422 VQERSSAVYQCNASNEYGYLLANAFINVLAEPPRILTPTNTLYQVIANRPALLDCAFFGS 481

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           P    +I W +G++      +   +  N  +L +  + +  +G YTC A+ +L   + + 
Sbjct: 482 P--LPTIEWFKGTKGSALREDIYILHENG-TLEIPVAQKDSTGTYTCVARNKLGMAKNEV 538

Query: 395 TLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGS 451
            L ++ P   ++ P  + ++Q    + + VS+     +    H     V TW + +GE  
Sbjct: 539 HLEIKDPTRIIKQPE-YAVVQ----RGSTVSF---ECKVKHDHTLTLTV-TWLKDNGE-- 587

Query: 452 IRELIVNKGESTTTEVDKFVPAS-----KNFARVLAFNGAYNGPPSEIISFVTPEGVPGT 506
                +   +  T E D  V A            +A     N   S ++S V P   P  
Sbjct: 588 -----LPDDDRFTIEKDHLVIADVTDDDSGTYTCVANTTLDNVSASAVLSVVAPTPTPAP 642

Query: 507 VQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIKYQ-SVKGTKVGPLLERLPY 558
           V  +   P           +  L W   +  N  +  + I+Y+ ++ G  V      +P 
Sbjct: 643 VYDVPNPPFDLELTNQLDKSVQLSWTPGDDNNSPITKFIIEYEDTMHGAGVWHHHTEVPG 702

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNL 618
               T T+A+L  L P      H    TKA     +  L   P KNP  VEG G+ P+NL
Sbjct: 703 ----TQTTAQLK-LSPKV---FHSLQKTKAYTCVAA--LLLEPDKNPTAVEGLGTEPDNL 752

Query: 619 VISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           VI+W  +   E N P  +Y++ WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 753 VITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 810



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 138/587 (23%), Positives = 237/587 (40%), Gaps = 64/587 (10%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
            + N+   L C F G+PLP   W K        + I   +   +L I   +    G+YTC 
Sbjct: 467  IANRPALLDCAFFGSPLPTIEWFKGTKGSALREDIYILHENGTLEIPVAQKDSTGTYTCV 526

Query: 106  VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEIHWVHNG 163
              N +G AK+  + L +        +PE+       TV+FECK          + W+ + 
Sbjct: 527  ARNKLGMAKN-EVHLEIKDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTLTVTWLKDN 585

Query: 164  KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE--- 220
                + P + R  +  + + I ++   D+G Y C A  +L  V     ++V+A  P    
Sbjct: 586  ---GELPDDDRFTIEKDHLVIADVTDDDSGTYTCVANTTLDNVSASAVLSVVAPTPTPAP 642

Query: 221  ITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVN-------------------WIHNQKELT 260
            + + P   + ++    +  + ++   P  + N                   W H+  E+ 
Sbjct: 643  VYDVPNPPFDLELTNQLDKSVQLSWTPGDDNNSPITKFIIEYEDTMHGAGVW-HHHTEVP 701

Query: 261  GGRYTILETGDLKITDVAF---ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDY 317
            G +     T  LK++   F     +  YTC A   L   +   ++       +  +P++ 
Sbjct: 702  GTQ----TTAQLKLSPKVFHSLQKTKAYTCVAALLLEPDKNPTAVE-----GLGTEPDNL 752

Query: 318  EVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSG 377
             +       F  N    P L+  + W +     ++ S    V +N     V+ +      
Sbjct: 753  VITWKPLNGFESNG---PGLQYKVSWRQKDGDDEWTS---VVVANVSKYIVSGTPTFVPY 806

Query: 378  QYTCRAQTELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRG 433
                +A  ++ F    A +       +P+ AP N   + V+++  A V W+PV  +S+RG
Sbjct: 807  LIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVH-VSVVNSTLAEVHWDPVPLKSIRG 865

Query: 434  HFRGYKVQTWTEKDGEGSIRELIVNK-----GESTTTEVDKFVPASKNFARVLAFNGAYN 488
            H +GY++  W  +      R  I  K     G  T   +    P S     V   NG   
Sbjct: 866  HLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGE 925

Query: 489  GPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT- 547
            GP S    F TPEGVP   +SL+ +     +  L+W  P  PNG+L  Y +KYQ +  T 
Sbjct: 926  GPASADSVFNTPEGVPSAPKSLKIVNPTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTH 985

Query: 548  KVGPLLE-RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
            ++GPL++ ++P       T   L  L  ST+Y+ +    T AG G++
Sbjct: 986  ELGPLVDLKIP----ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQ 1028



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 147/611 (24%), Positives = 229/611 (37%), Gaps = 84/611 (13%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVP+     +PS +I     G ++I  +V+      Y C  S
Sbjct: 380 LICRANGNPKPRISWLTNGVPVEISPEDPSRKID----GDTIIFSNVQERSSAVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 436 NEYGYLLANAF-INVLAEPPRILTPTNTLYQVIANRPALLDCAFFGSPLPTIEWFKGTK- 493

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 494 -GSALREDIYILHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQ 551

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G TV   C+V         V W+ +  EL       +E   L I DV   DS
Sbjct: 552 PEYAVVQRGSTVSFECKVKHDHTLTLTVTWLKDNGELPDDDRFTIEKDHLVIADVTDDDS 611

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHT-------HITDQPEDYEV--EAGQSATFRCNAVS 333
           G YTC A   L     S  L+V   T        + + P D E+  +  +S         
Sbjct: 612 GTYTCVANTTLDNVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTNQLDKSVQLSWTPGD 671

Query: 334 D---PSLKLSI----------VWLRGSEPIDFESEPRFVQSND--YSLTVTKSSELDSGQ 378
           D   P  K  I          VW   +E    ++  +   S    +SL  TK+       
Sbjct: 672 DNNSPITKFIIEYEDTMHGAGVWHHHTEVPGTQTTAQLKLSPKVFHSLQKTKA------- 724

Query: 379 YTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVI--DAKKAVVSWNPVSPQSLRGHFR 436
           YTC A                + LE   N T ++ +  +    V++W P++     G   
Sbjct: 725 YTCVAA---------------LLLEPDKNPTAVEGLGTEPDNLVITWKPLNGFESNGPGL 769

Query: 437 GYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
            YKV +W +KDG+     ++V N  +   +    FVP      +V A N     P   ++
Sbjct: 770 QYKV-SWRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAVV 825

Query: 496 SFVTPEGVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVG 550
              + E +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +  
Sbjct: 826 MGHSGEDLPMVAPGNVHVSVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNR 885

Query: 551 PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVE 609
             +E+       + T   L GLEP + Y +++      G+G A +  +F  P       E
Sbjct: 886 RHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASADSVFNTP-------E 938

Query: 610 GRGSTPNNLVI 620
           G  S P +L I
Sbjct: 939 GVPSAPKSLKI 949



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 130/315 (41%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   + I  +   K++T  G Y
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGSGTLVINIMSEGKAETYEGVY 121

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVN-WI 253
            C A N  G    +  V   + +P  T+   +  T+ +G+++VL CR      P +  W+
Sbjct: 122 QCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLRNGQSLVLPCRPPIGLPPPIIFWM 181

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVKE--- 306
            N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK    
Sbjct: 182 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISV 241

Query: 307 ---HTHITDQPEDYEVEAGQSATFR--------CNAVSDPSLKLSIV------------- 342
              +  I     D E  + +S+  R         NA +   L+ +++             
Sbjct: 242 DELNDTIAANLSDTEFYSAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPI 301

Query: 343 --WLR--GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             W++  G+ P++  S   F +    +L +T  SE DSG Y C A+  L  I    ++TV
Sbjct: 302 IHWIKEDGTLPVNRMSYKNFKK----TLQITHVSEADSGNYQCIAKNALGAIHHTISVTV 357

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 358 KAAPYWIMAPQNLVL 372


>gi|224809606|ref|NP_001139239.1| neurofascin precursor [Danio rerio]
 gi|224383688|gb|ACN42744.1| neurofascin neuronal isoform [Danio rerio]
          Length = 1369

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/360 (35%), Positives = 192/360 (53%), Gaps = 8/360 (2%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           ++ LR  ++ L CI  G P P   WSK G  + P+ ++  GN+ K+L I +V   D GSY
Sbjct: 255 KMVLRGGELLLECIAAGVPTPTITWSKRGGDL-PTKKVRIGNFDKTLRILNVSEEDIGSY 313

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
           TC  SN +G  + +++++ V AAP++  +P  +  A +E+    C+A+G P+P I W+ N
Sbjct: 314 TCMASNRIGSIR-HTVEVQVKAAPFWLEKPINLVLAPDESGRLVCRANGSPKPTIQWLVN 372

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           G+PI  + PNP R+V  + I  E ++   +  Y CNA+N  GY+  + +V+VL  AP + 
Sbjct: 373 GEPIESSLPNPNRRVLDDTIIFETVQFESSAVYQCNASNEHGYLLANAFVSVLDMAPRML 432

Query: 223 EAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHN--QKELTGGRYTILETGDLKITDVA 278
             PK++    ++     L C  FG+P P + W  N     L GG Y +   G L+I    
Sbjct: 433 -GPKNQLIKVIENNRTFLECPFFGSPLPLLRWFKNGLGSGLDGGHYRLYHNGTLEIKQAR 491

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
             D G YTC A + LG  +    L VKE T I   PE      G +  F C    DPSL 
Sbjct: 492 TEDQGTYTCVASSILGKMENQVRLEVKEPTRIVRAPEHKTEPRGTTVRFDCRVKHDPSLP 551

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
            ++ WL+  +P+ F    R ++ +D SLT+   +  D G YTC A+TE+D   A A LTV
Sbjct: 552 ATVTWLKDEKPLSFSWIGR-LKKDDESLTIYNVNPDDGGTYTCTAKTEIDEDTASARLTV 610



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 147/654 (22%), Positives = 256/654 (39%), Gaps = 62/654 (9%)

Query: 64  QTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSDQGSYTC----EVSNGVGEAKSYSI 118
           +T W    + PI    R+S G  G       +    +  Y+C    E ++ + +   Y++
Sbjct: 171 ETFWMDSFIMPIAQDRRVSMGLNGDLFFSNVLAKDAKTDYSCNARFEFTHTIQQKNPYTL 230

Query: 119 DLSVL----------AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQ 168
            +  +           +P      + +    E  +  EC A+G+P P I W   G  +  
Sbjct: 231 KVQTMRNIPETQPTSLSPTGLPSTKMVLRGGE--LLLECIAAGVPTPTITWSKRGGDL-- 286

Query: 169 APPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
             P  + ++G     + I N+ + D G+Y C A+N +G +   V V V A AP   E P 
Sbjct: 287 --PTKKVRIGNFDKTLRILNVSEEDIGSYTCMASNRIGSIRHTVEVQVKA-APFWLEKPI 343

Query: 227 DEYTVDGKTVVLTCRVFGAPKPEVNWIHN----QKELTGGRYTILETGDLKITDVAFADS 282
           +      ++  L CR  G+PKP + W+ N    +  L      +L+   +    V F  S
Sbjct: 344 NLVLAPDESGRLVCRANGSPKPTIQWLVNGEPIESSLPNPNRRVLD-DTIIFETVQFESS 402

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA--GQSATFRCNAVSDPSLKLS 340
             Y C A N+ G    +  ++V +       P++  ++          C     P L L 
Sbjct: 403 AVYQCNASNEHGYLLANAFVSVLDMAPRMLGPKNQLIKVIENNRTFLECPFFGSP-LPL- 460

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           + W +       +     +  N  +L + ++   D G YTC A + L  +E Q  L V+ 
Sbjct: 461 LRWFKNGLGSGLDGGHYRLYHNG-TLEIKQARTEDQGTYTCVASSILGKMENQVRLEVKE 519

Query: 401 P---LEAPSNFTLIQVIDAK-KAVVSWNPVSPQSLRGHFRGYKVQTWT-----EKDGEG- 450
           P   + AP + T  +    +    V  +P  P ++    +  K  +++     +KD E  
Sbjct: 520 PTRIVRAPEHKTEPRGTTVRFDCRVKHDPSLPATVT-WLKDEKPLSFSWIGRLKKDDESL 578

Query: 451 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSL 510
           +I  +  + G + T      +      AR+           S   +     G P   Q L
Sbjct: 579 TIYNVNPDDGGTYTCTAKTEIDEDTASARLTVTENDS----SSASNRSASAGRPDPPQDL 634

Query: 511 EAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
           E     + +  L WV   + N  +  + ++++     +  P   +   I D    S  L 
Sbjct: 635 ELSDPSARSVRLTWVPGNENNSPVTHFLVQFEE---DRWEPGKWQNLSIYDWNLNSVNLQ 691

Query: 571 GLEPSTKYRIHLAGYTKAGD------GAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTA 624
            L P   Y+  +      G        A  +     P   P  ++G GS  NN+ I+W A
Sbjct: 692 -LSPFVNYQFRVIAINAVGQSQPSHPSARYQTSGAPPDVVPSGLKGWGSKKNNMEITWQA 750

Query: 625 MPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           M   E N P+ +Y + WRR +T E WN    +   +++ V+ N  T+ PYEIK+
Sbjct: 751 MQNTERNGPNLRYVLSWRRKDTEEEWNN---ITTAKTKHVVHNTDTYVPYEIKI 801



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 147/601 (24%), Positives = 228/601 (37%), Gaps = 81/601 (13%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G+P P   W  +G PI     NP+ R+       ++I + V+F     Y C  S
Sbjct: 355 LVCRANGSPKPTIQWLVNGEPIESSLPNPNRRV----LDDTIIFETVQFESSAVYQCNAS 410

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  +SVL      + P  + I   E      EC   G P P + W  NG  
Sbjct: 411 NEHGYLLANAF-VSVLDMAPRMLGPKNQLIKVIENNRTFLECPFFGSPLPLLRWFKNGLG 469

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
            S       R      + I+  R  D G Y C A++ LG +   V + V      I  AP
Sbjct: 470 -SGLDGGHYRLYHNGTLEIKQARTEDQGTYTCVASSILGKMENQVRLEV-KEPTRIVRAP 527

Query: 226 KDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRYTILETGD--LKITDVAFAD 281
           + +    G TV   CRV   P     V W+ ++K L+      L+  D  L I +V   D
Sbjct: 528 EHKTEPRGTTVRFDCRVKHDPSLPATVTWLKDEKPLSFSWIGRLKKDDESLTIYNVNPDD 587

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHIT-----------DQPEDYEVEAGQSATFRCN 330
            G YTC A+ ++     S  LTV E+   +           D P+D E            
Sbjct: 588 GGTYTCTAKTEIDEDTASARLTVTENDSSSASNRSASAGRPDPPQDLE------------ 635

Query: 331 AVSDPSLK-LSIVWLRGSEP--------IDFES---EPRFVQS---NDYSLTVTKSSELD 375
            +SDPS + + + W+ G+E         + FE    EP   Q+    D++L         
Sbjct: 636 -LSDPSARSVRLTWVPGNENNSPVTHFLVQFEEDRWEPGKWQNLSIYDWNLNSVNLQLSP 694

Query: 376 SGQYTCR-------AQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKK--AVVSWNPV 426
              Y  R        Q++     A+   +   P   PS    ++   +KK    ++W  +
Sbjct: 695 FVNYQFRVIAINAVGQSQPSHPSARYQTSGAPPDVVPSG---LKGWGSKKNNMEITWQAM 751

Query: 427 SPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
                 G    Y V +W  KD E     +   K +      D +VP      ++ A N  
Sbjct: 752 QNTERNGPNLRY-VLSWRRKDTEEEWNNITTAKTKHVVHNTDTYVPYE---IKIQAVNDF 807

Query: 487 YNGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKY-- 541
            +GP S ++   + E  P    + L    + S+   + W   EQ   NG    YK+ Y  
Sbjct: 808 GHGPESNMVIGYSGEDKPSAAPTDLRVSKINSTKVNIHWEPVEQSSVNGEFKEYKLYYWR 867

Query: 542 --QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL-F 598
               +KG KV        + +     S  L  L P +KY++++    +  +G +S  + F
Sbjct: 868 EASLIKGLKVNRTKLHKGFFTTAENPSGILTELYPYSKYKMYMVVANREHEGPQSNTVEF 927

Query: 599 Y 599
           Y
Sbjct: 928 Y 928



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 95/201 (47%), Gaps = 18/201 (8%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVN-- 458
            P  AP++   +  I++ K  + W PV   S+ G F+ YK+  W E      I+ L VN  
Sbjct: 825  PSAAPTDLR-VSKINSTKVNIHWEPVEQSSVNGEFKEYKLYYWREA---SLIKGLKVNRT 880

Query: 459  ---KGESTTTE-----VDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSL 510
               KG  TT E     + +  P SK    ++  N  + GP S  + F T EG PG  +  
Sbjct: 881  KLHKGFFTTAENPSGILTELYPYSKYKMYMVVANREHEGPQSNTVEFYTKEGEPGAPKYF 940

Query: 511  EAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
              I   +   +LKW KP +PNGVL+GY ++Y +V GT+ G   ER      P  T   + 
Sbjct: 941  R-ILRHTDVVHLKWDKPLEPNGVLIGYTLQYHTVNGTQTG---ERKVQSFPPNVTEYVMN 996

Query: 571  GLEPSTKYRIHLAGYTKAGDG 591
                 T+++  LA  T+ G G
Sbjct: 997  LPHRFTRFKFFLAARTQVGAG 1017



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 122/299 (40%), Gaps = 38/299 (12%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDT-----GNY 195
           + +  EC+A G P P   W  NGK       +PR  +     T+E +R S       G Y
Sbjct: 58  DNIIIECEAKGNPVPTFQWRRNGK-FFNVGKDPRVTMRSRSGTLE-IRSSGKPEDYEGEY 115

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A+N+LG    +  +  ++ +P   +   +  TV +G  +VL C    G P PE  W+
Sbjct: 116 QCFASNNLGTAISNKILLRVSKSPLWPKEVLEPVTVREGSPLVLACNPPPGLPPPETFWM 175

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSG-EYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +         R ++   GDL  ++V   D+  +Y+C AR +   T Q     T+K  T 
Sbjct: 176 DSFIMPIAQDRRVSMGLNGDLFFSNVLAKDAKTDYSCNARFEFTHTIQQKNPYTLKVQTM 235

Query: 310 I------------TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVW-LRGSEPIDFESEP 356
                        T  P    V  G      C A   P+   +I W  RG    D  ++ 
Sbjct: 236 RNIPETQPTSLSPTGLPSTKMVLRGGELLLECIAAGVPT--PTITWSKRGG---DLPTKK 290

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP-----LEAPSNFTL 410
             + + D +L +   SE D G YTC A   +  I  + T+ VQV      LE P N  L
Sbjct: 291 VRIGNFDKTLRILNVSEEDIGSYTCMASNRIGSI--RHTVEVQVKAAPFWLEKPINLVL 347


>gi|410952028|ref|XP_003982691.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Felis catus]
          Length = 1212

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 169/547 (30%), Positives = 249/547 (45%), Gaps = 39/547 (7%)

Query: 25  SASQNRHAPKQQYV----TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRI 80
           SA  NR  P         T  KE  LR   + L CI  G P P   W K+   + P++R 
Sbjct: 259 SAKPNRERPPTFLTPEGNTSNKE-ELRGNVLSLECIAEGLPTPVIYWIKEDGTL-PTNRT 316

Query: 81  SQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEE 140
              N+ K+L I  V  +D G+Y C   N +G A  ++I ++V AAPY+ + P+ +  +  
Sbjct: 317 FYRNFKKTLQIIQVSEADSGNYQCIAKNALG-AIHHTISVTVKAAPYWILAPQNLVLSPG 375

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
           E  +  C+A+G P+P I W+ NG PI  AP +P RK+  + I   N+++  +  Y CNA+
Sbjct: 376 EDGSLICRANGNPKPRISWLSNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNAS 435

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK-- 257
           N  GY+  + +VNVLA  P I  +    Y V   +  +L C  FG+P P + W    K  
Sbjct: 436 NEYGYLLANAFVNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGS 495

Query: 258 ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDY 317
            L    Y + E G L+I       +G YTC ARNKLG A+    L +K+ T I  QPE  
Sbjct: 496 ALRDDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQPEYA 555

Query: 318 EVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSG 377
            V+ G + +F C    D +L L+I WL+ +   +  S+ RF    D+ L V    + D G
Sbjct: 556 VVQRGSTVSFECKVKHDHTLTLTITWLKDNG--ELPSDGRFTVDKDH-LEVADVRDSDGG 612

Query: 378 QYTCRAQTELDFIEAQATLTVQVPLEAPS----------NFTLIQVIDAKKAVVSWNPVS 427
            YTC A T LD + A A L+V  P   P+          +  L   +D K   +SW P  
Sbjct: 613 AYTCVANTTLDMVSASAVLSVVAPTPTPAPIYDVPNPPFDLELTDQLD-KSVQLSWTPGD 671

Query: 428 PQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
             +       + ++        G         G  TT ++ K  P      RV+A N   
Sbjct: 672 DNN--SPITKFIIEYEDAMHEAGLWHHQTEVSGTQTTAQL-KLSPYVNYSFRVMAVNSLG 728

Query: 488 NGPPSE-----IISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPE---QPNGVLMGYKI 539
              PSE     +     P+  P  V+ L + P       + W KP    + NG  + YK+
Sbjct: 729 RSLPSEPSEQYLTKAAEPDTNPTAVEGLGSEP---DNLVITW-KPLNGFESNGPGLQYKV 784

Query: 540 KYQSVKG 546
            ++   G
Sbjct: 785 SWRQKDG 791



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 142/568 (25%), Positives = 231/568 (40%), Gaps = 66/568 (11%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS---------DTG 193
           ++ EC A GLP P I+W+     +             NR    N +K+         D+G
Sbjct: 288 LSLECIAEGLPTPVIYWIKEDGTLPT-----------NRTFYRNFKKTLQIIQVSEADSG 336

Query: 194 NYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWI 253
           NY C A N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+
Sbjct: 337 NYQCIAKNALGAIHHTISVTVKA-APYWILAPQNLVLSPGEDGSLICRANGNPKPRISWL 395

Query: 254 HN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH- 309
            N    E+     +    GD  I ++V    S  Y C A N+ G    +  + V      
Sbjct: 396 SNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPR 455

Query: 310 -ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
            +T     Y+V A + A   C     P    +I W +G++      +   +  N  +L +
Sbjct: 456 ILTSANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALRDDIYVLHENG-TLEI 512

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNP 425
             + +  +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q    + + VS+  
Sbjct: 513 PVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQPE-YAVVQ----RGSTVSF-- 565

Query: 426 VSPQSLRGHFRGYKVQTWTEKDGE-GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN 484
              +    H     + TW + +GE  S     V+K      +V      S   A     N
Sbjct: 566 -ECKVKHDHTLTLTI-TWLKDNGELPSDGRFTVDKDHLEVADVRD----SDGGAYTCVAN 619

Query: 485 GAYNG-PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMG 536
              +    S ++S V P   P  +  +   P           +  L W   +  N  +  
Sbjct: 620 TTLDMVSASAVLSVVAPTPTPAPIYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITK 679

Query: 537 YKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-- 594
           + I+Y+         L      +S  T T+A+L  L P   Y   +      G    S  
Sbjct: 680 FIIEYED--AMHEAGLWHHQTEVSG-TQTTAQLK-LSPYVNYSFRVMAVNSLGRSLPSEP 735

Query: 595 --KYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
             +YL     P  NP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W
Sbjct: 736 SEQYLTKAAEPDTNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEW 795

Query: 651 NQDDVLDWRQSELVLANQPTFQPYEIKV 678
               V+    S+ +++  PTF PY IKV
Sbjct: 796 AS--VVVANVSKYIVSGTPTFVPYLIKV 821



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 17/204 (8%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR------ 453
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  K  EGS++      
Sbjct: 844  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYW--KAQEGSLKRNRRHI 900

Query: 454  --ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLE 511
              +++  +G  T   +    P S     V   NG   GP S    F TPEGVP    SL+
Sbjct: 901  EKKILTFQGSKTHGMLPGLEPFSHYALNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLK 960

Query: 512  AIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKL 569
             +     +  L+W  P +PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L
Sbjct: 961  IVNPTLDSLTLEWDPPSRPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWTL 1016

Query: 570  AGLEPSTKYRIHLAGYTKAGDGAE 593
              L  ST+Y+ +    T AG G++
Sbjct: 1017 KNLNFSTRYKFYFYAQTAAGSGSQ 1040



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 146/614 (23%), Positives = 235/614 (38%), Gaps = 78/614 (12%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 380 LICRANGNPKPRISWLSNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T                +C   G P P I W    K 
Sbjct: 436 NEYGYLLANAF-VNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 493

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A  +    +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 494 -GSALRDDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQ 551

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P+      G TV   C+V         + W+ +  EL + GR+T+ +   L++ DV  +D
Sbjct: 552 PEYAVVQRGSTVSFECKVKHDHTLTLTITWLKDNGELPSDGRFTV-DKDHLEVADVRDSD 610

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHT-------HITDQPEDYEVEAGQSATFRCNAVSD 334
            G YTC A   L     S  L+V   T        + + P D E+              D
Sbjct: 611 GGAYTCVANTTLDMVSASAVLSVVAPTPTPAPIYDVPNPPFDLELTDQL----------D 660

Query: 335 PSLKLSIVWLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
            S++LS  W  G +   PI     E E    ++  +      S    + Q          
Sbjct: 661 KSVQLS--WTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTEVSGTQTTAQLKLSPYVNYS 718

Query: 389 F-IEAQATLTVQVP-----------LEAPSNFTLIQVIDAK--KAVVSWNPVSPQSLRGH 434
           F + A  +L   +P            E  +N T ++ + ++    V++W P++     G 
Sbjct: 719 FRVMAVNSLGRSLPSEPSEQYLTKAAEPDTNPTAVEGLGSEPDNLVITWKPLNGFESNGP 778

Query: 435 FRGYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
              YKV +W +KDG+     ++V N  +   +    FVP      +V A N     P   
Sbjct: 779 GLQYKV-SWRQKDGDDEWASVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPA 834

Query: 494 IISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKY---QSVKGT 547
           ++   + E +P     ++    + S+   + W  V  +   G L GY+I Y   Q     
Sbjct: 835 VVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQEGSLK 894

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPD 606
           +    +E+       + T   L GLEP + Y +++      G+G A    +F  P     
Sbjct: 895 RNRRHIEKKILTFQGSKTHGMLPGLEPFSHYALNVRVVNGKGEGPASPDRVFNTP----- 949

Query: 607 NVEGRGSTPNNLVI 620
             EG  S P++L I
Sbjct: 950 --EGVPSAPSSLKI 961



 Score = 46.6 bits (109), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 127/313 (40%), Gaps = 45/313 (14%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   +TI  +   K++T  G Y
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGSGTLTINIMSEGKAETYEGVY 121

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPE-VNWI 253
            C A N  G    +  V   + +P  T+   +  T+ +G+++VL CR      P  + W+
Sbjct: 122 QCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLRNGQSLVLPCRPPLGLPPPIIFWM 181

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVKE--- 306
            N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK    
Sbjct: 182 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISV 241

Query: 307 -------HTHITD-----------QPEDYEVEAGQSAT---FRCNAVSDPSLKLS----- 340
                    +++D           +P  +    G ++     R N +S   +        
Sbjct: 242 DELNDTIAANLSDTEFYSAKPNRERPPTFLTPEGNTSNKEELRGNVLSLECIAEGLPTPV 301

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W++  E     +   F ++   +L + + SE DSG Y C A+  L  I    ++TV+ 
Sbjct: 302 IYWIK--EDGTLPTNRTFYRNFKKTLQIIQVSEADSGNYQCIAKNALGAIHHTISVTVKA 359

Query: 401 P---LEAPSNFTL 410
               + AP N  L
Sbjct: 360 APYWILAPQNLVL 372


>gi|237858648|ref|NP_001153795.1| neurofascin isoform 7 precursor [Gallus gallus]
          Length = 1179

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/395 (34%), Positives = 204/395 (51%), Gaps = 15/395 (3%)

Query: 37  YVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEF 96
           Y T   ++ LR   + L CI  G P P  +W K G  + P+ +    N+ K+L I +V  
Sbjct: 262 YGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGGEL-PAGKTKLENFNKALRISNVSE 320

Query: 97  SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE 156
            D G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P 
Sbjct: 321 EDSGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPQNLILAPGEDGRLVCRANGNPKPS 379

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           I W+ NG+PI  +PPNP R+V  + I   + +   +  Y CNA+N  GY+  + +V+VL 
Sbjct: 380 IQWLVNGEPIEGSPPNPSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLD 439

Query: 217 HAPEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDL 272
             P I  AP+++    +      L C  FG+P P + W  N +   L GG Y   E G L
Sbjct: 440 VPPRIL-APRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQGNMLDGGNYKAHENGSL 498

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV 332
           +++     D G YTC A N LG  +    L VK+ T I   PED  V+ G      C   
Sbjct: 499 EMSMARKEDQGIYTCVATNILGKVEAQVRLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVK 558

Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
            DP+LKL++ WL+   P+   +    ++  D  LT+   +E D G YTC A TELD   A
Sbjct: 559 HDPTLKLTVTWLKDDAPLYIGNR---MKKEDDGLTIYGVAEKDQGDYTCVASTELDKDSA 615

Query: 393 QATLTVQVPLEAPSNFTLIQVID-AKKAV-VSWNP 425
           +A LTV   LE P     +++ D A+++V ++W P
Sbjct: 616 KAYLTV---LERPDRPRDLELSDLAERSVKLTWIP 647



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 144/629 (22%), Positives = 238/629 (37%), Gaps = 96/629 (15%)

Query: 15   ILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI 74
            +L N   + +       AP+ Q +       ++  +  L C F G+P+P   W K+G   
Sbjct: 429  LLANAFVSVLDVPPRILAPRNQLIK-----VIQYNRTRLDCPFFGSPIPTLRWFKNG--- 480

Query: 75   NPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV 130
               + +  GNY      SL +      DQG YTC  +N +G+ ++  + L V        
Sbjct: 481  -QGNMLDGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEA-QVRLEVKDPTRIVR 538

Query: 131  EPEFINAAEEETVTFECKASGLPEPE--IHWVHNGKPISQAPPNPRRKVGPNRITIENLR 188
             PE             C+    P  +  + W+ +  P+       R K   + +TI  + 
Sbjct: 539  GPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGN---RMKKEDDGLTIYGVA 595

Query: 189  KSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD--GKTVVLT------- 239
            + D G+Y C A+  L       Y+ VL    E  + P+D    D   ++V LT       
Sbjct: 596  EKDQGDYTCVASTELDKDSAKAYLTVL----ERPDRPRDLELSDLAERSVKLTWIPGDDN 651

Query: 240  -------CRVFGAPKPEVNWIHNQKELTGG--------------RYTILETGDLKITDVA 278
                      F   + +    HN     G               ++ ++   D+  +  +
Sbjct: 652  NSPITDYIVQFEEDRFQPGTWHNHSRYPGNVNSALLSLSPYVNYQFRVIAVNDVGSSLPS 711

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
                   T  AR ++      G+ T K +  IT  P +     G            P+L+
Sbjct: 712  MPSERYQTSGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYG------------PNLR 759

Query: 339  LSIVWLR----GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
              + W R    GS   +    PR V  N                Y  + Q E DF  A  
Sbjct: 760  YIVRWRRRDPRGSWYNETVKAPRHVVWNTPIYV----------PYEIKVQAENDFGRAPE 809

Query: 395  TLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
              T         P  AP++   I+V+++    ++W  V   +++G  + Y+   W +   
Sbjct: 810  PETYIGYSGEDYPKAAPTDVR-IRVLNSTAIALTWTRVHLDTIQGQLKEYRAYFWRDSSL 868

Query: 449  EGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGV 503
              ++     R+ +   G+     V +  P S     ++  NG  +GP SE+  F TPEGV
Sbjct: 869  LKNLWVSKKRQYVSFPGDRNRGIVSRLFPYSNYKLEMVVTNGRGDGPRSEVKEFPTPEGV 928

Query: 504  PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVG-PLLERLPYISDP 562
            P + + L        +  L+W  PE PNGVL GY ++YQ+  G+K G  L+E       P
Sbjct: 929  PSSPRYLRIRQPNLESINLEWDHPEHPNGVLTGYNLRYQAFNGSKTGRTLVENF----SP 984

Query: 563  TTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
              T   +   +P ++YR  L   T+ GDG
Sbjct: 985  NQTRFTVQRTDPISRYRFFLRARTQVGDG 1013



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 150/672 (22%), Positives = 252/672 (37%), Gaps = 116/672 (17%)

Query: 73  PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGEAKSYSIDLSV----- 122
           PI+   R+SQG  G  L   +V   D Q  Y+C      ++ + +   Y++ +       
Sbjct: 177 PIHQDKRVSQGQNG-DLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTKKPHN 235

Query: 123 ----------------------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV 160
                                    PY T   + +    +  +  EC ASG+P P+I W 
Sbjct: 236 ETSLRNHTDMYSARGVTETTPSFMYPYGTSSSQMVLRGVD--LLLECIASGVPAPDIMWY 293

Query: 161 HNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
             G    + P    +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP
Sbjct: 294 KKG---GELPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-AP 349

Query: 220 EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKI 274
              + P++     G+   L CR  G PKP + W+ N + + G      R    +T  +  
Sbjct: 350 YWLDEPQNLILAPGEDGRLVCRANGNPKPSIQWLVNGEPIEGSPPNPSREVAGDT--IVF 407

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
            D     S  Y C A N+ G    +  ++V +       P +  ++  Q    R +    
Sbjct: 408 RDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRILAPRNQLIKVIQYNRTRLDCPFF 467

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
            S   ++ W +  +    +        N  SL ++ + + D G YTC A   L  +EAQ 
Sbjct: 468 GSPIPTLRWFKNGQGNMLDGGNYKAHENG-SLEMSMARKEDQGIYTCVATNILGKVEAQV 526

Query: 395 TLTVQVPLE--------------APSNFTLIQVIDAKKAVVSW-NPVSPQSLRGHFR--- 436
            L V+ P                 P     ++     K  V+W    +P  +    +   
Sbjct: 527 RLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKED 586

Query: 437 -GYKVQTWTEKDGEGSIRELIVNKGEST---TTEVDKFVPASKNFARVLAFNGAYNGPPS 492
            G  +    EKD           +G+ T   +TE+DK   ++K +  VL           
Sbjct: 587 DGLTIYGVAEKD-----------QGDYTCVASTELDK--DSAKAYLTVLE---------- 623

Query: 493 EIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPL 552
                      P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G  
Sbjct: 624 ----------RPDRPRDLELSDLAERSVKLTWIPGDDNNSPITDYIVQFEEDR-FQPGTW 672

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES----KYLF--YVPFKNPD 606
                Y   P   ++ L  L P   Y+  +      G    S    +Y      P  NP 
Sbjct: 673 HNHSRY---PGNVNSALLSLSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPT 729

Query: 607 NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLA 666
            V+G G+  NN+ I+WT +   +   P+ +Y + WRR +   +W  + V   R    V+ 
Sbjct: 730 GVQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRH---VVW 786

Query: 667 NQPTFQPYEIKV 678
           N P + PYEIKV
Sbjct: 787 NTPIYVPYEIKV 798



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 89/222 (40%), Gaps = 37/222 (16%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELT------------G 261
           L   P IT+    +Y VD +  + + C   G P P  +W  N K                
Sbjct: 32  LPQPPTITKQSVKDYIVDPRDNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRS 91

Query: 262 GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP------- 314
           G   I   G  +  D      GEY CFARN  GTA     L+ K H  ++  P       
Sbjct: 92  GTLVIDFHGGGRPDDY----EGEYQCFARNDYGTA-----LSSKIHLQVSRSPLWPKEKV 142

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS-EPIDFESEPRFVQSND--YSLTVTKS 371
           +  EV+ G   + +CN        + I W+  S EPI  +      Q+ D  +S  + + 
Sbjct: 143 DVIEVDEGAPLSLQCNPPPGLPPPV-IFWMSSSMEPIHQDKRVSQGQNGDLYFSNVMLQD 201

Query: 372 SELDSGQYTCRAQTELDF-IEAQATLTVQVPLEAPSNFTLIQ 412
           ++ D   Y+C A+      I+ +   T++V  + P N T ++
Sbjct: 202 AQTD---YSCNARFHFTHTIQQKNPYTLKVKTKKPHNETSLR 240



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 124/319 (38%), Gaps = 59/319 (18%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSDT--GNY 195
           + +  EC+A G P P   W  NGK   +++ P  + RR+ G   I      + D   G Y
Sbjct: 52  DNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHGGGRPDDYEGEY 111

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNW-- 252
            C A N  G          ++ +P   +   D   VD G  + L C       P V +  
Sbjct: 112 QCFARNDYGTALSSKIHLQVSRSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPPPVIFWM 171

Query: 253 ------IHNQKELTGGRYTILETGDLKITDVAFADSG-EYTCFARN-------------- 291
                 IH  K ++ G     + GDL  ++V   D+  +Y+C AR               
Sbjct: 172 SSSMEPIHQDKRVSQG-----QNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTL 226

Query: 292 KLGTAQGSGSLTVKEHTH------ITDQPEDYEVEAGQSAT----------FRCNAVSDP 335
           K+ T +     +++ HT       +T+    +    G S++            C A   P
Sbjct: 227 KVKTKKPHNETSLRNHTDMYSARGVTETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVP 286

Query: 336 SLKLSIVWL-RGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +    I+W  +G E     +    +++ + +L ++  SE DSG+Y C A  ++  I    
Sbjct: 287 A--PDIMWYKKGGE---LPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTI 341

Query: 395 TLTVQVP---LEAPSNFTL 410
           ++ V+     L+ P N  L
Sbjct: 342 SVRVKAAPYWLDEPQNLIL 360


>gi|160774176|gb|AAI55082.1| Sc:d0205 protein [Danio rerio]
          Length = 745

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/360 (35%), Positives = 192/360 (53%), Gaps = 8/360 (2%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           ++ LR +++ L CI  G P P   WSK G  + P+ ++  GN+ K+L I +V   D GSY
Sbjct: 255 KMVLRGEELLLECIAAGVPTPTITWSKRGGDL-PTKKVRIGNFDKTLRILNVSEEDIGSY 313

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
           TC  SN +G  + +++++ V AAP++  +P  +  A +E+    C+A+G P+P I W+ N
Sbjct: 314 TCMASNRIGSIR-HTVEVQVKAAPFWLEKPINLVLAPDESGRLVCRANGSPKPTIQWLVN 372

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           G+PI  + PNP R+V  + I  E ++   +  Y CNA+N  GY+  + +V+VL  AP + 
Sbjct: 373 GEPIESSLPNPNRRVLDDTIIFETVQFESSAVYQCNASNEHGYLLANAFVSVLDMAPRML 432

Query: 223 EAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHN--QKELTGGRYTILETGDLKITDVA 278
             PK++    ++     L C  FG+P P + W  N     L GG Y +   G L+I    
Sbjct: 433 -GPKNQLIKVIENNRTFLECPFFGSPLPLLRWFKNGLGSGLDGGHYRLYHNGTLEIKQAQ 491

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
             D G YTC A   LG  +    L VKE T I   PE      G +  F C    DPSL 
Sbjct: 492 TEDQGTYTCVASIILGKMENQVRLEVKEPTRIVRAPEHKTEPRGTTVRFDCRVKHDPSLP 551

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
            ++ WL+  +P+ F    R ++ +D SLT+   +  D G YTC A+TE+D   A A LTV
Sbjct: 552 ATVTWLKDEKPLSFSWIGR-LKKDDESLTIYNVNPDDGGTYTCTAKTEIDEDTASARLTV 610



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 127/319 (39%), Gaps = 43/319 (13%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G+P P   W  +G PI     NP+ R+       ++I + V+F     Y C  S
Sbjct: 355 LVCRANGSPKPTIQWLVNGEPIESSLPNPNRRV----LDDTIIFETVQFESSAVYQCNAS 410

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  +SVL      + P  + I   E      EC   G P P + W  NG  
Sbjct: 411 NEHGYLLANAF-VSVLDMAPRMLGPKNQLIKVIENNRTFLECPFFGSPLPLLRWFKNGLG 469

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
            S       R      + I+  +  D G Y C A+  LG +   V + V      I  AP
Sbjct: 470 -SGLDGGHYRLYHNGTLEIKQAQTEDQGTYTCVASIILGKMENQVRLEV-KEPTRIVRAP 527

Query: 226 KDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRYTILETGD--LKITDVAFAD 281
           + +    G TV   CRV   P     V W+ ++K L+      L+  D  L I +V   D
Sbjct: 528 EHKTEPRGTTVRFDCRVKHDPSLPATVTWLKDEKPLSFSWIGRLKKDDESLTIYNVNPDD 587

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHIT-----------DQPEDYEVEAGQSATFRCN 330
            G YTC A+ ++     S  LTV E+   +           D P+D E            
Sbjct: 588 GGTYTCTAKTEIDEDTASARLTVTENDSSSASNRSASAGRPDPPQDLE------------ 635

Query: 331 AVSDPSLK-LSIVWLRGSE 348
            +SDPS + + + W+ G+E
Sbjct: 636 -LSDPSARSVRLTWVPGNE 653



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 151/360 (41%), Gaps = 32/360 (8%)

Query: 64  QTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSDQGSYTC----EVSNGVGEAKSYSI 118
           +T W    + PI    R+S G  G       +    +  Y+C    E ++ + +   Y++
Sbjct: 171 ETFWMDSFIMPIAQDRRVSMGLNGDLFFSNVLAKDAKTDYSCNARFEFTHTIQQKNPYTL 230

Query: 119 DLSVL-----AAPYFTVEPEFINAAEE----ETVTFECKASGLPEPEIHWVHNGKPISQA 169
            +  +       P F + P  +++ +     E +  EC A+G+P P I W   G  +   
Sbjct: 231 KVQTMRNIPETQPTF-LSPTGLSSTKMVLRGEELLLECIAAGVPTPTITWSKRGGDL--- 286

Query: 170 PPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKD 227
            P  + ++G     + I N+ + D G+Y C A+N +G +   V V V A AP   E P +
Sbjct: 287 -PTKKVRIGNFDKTLRILNVSEEDIGSYTCMASNRIGSIRHTVEVQVKA-APFWLEKPIN 344

Query: 228 EYTVDGKTVVLTCRVFGAPKPEVNWIHN----QKELTGGRYTILETGDLKITDVAFADSG 283
                 ++  L CR  G+PKP + W+ N    +  L      +L+   +    V F  S 
Sbjct: 345 LVLAPDESGRLVCRANGSPKPTIQWLVNGEPIESSLPNPNRRVLD-DTIIFETVQFESSA 403

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS-ATF-RCNAVSDPSLKLSI 341
            Y C A N+ G    +  ++V +       P++  ++  ++  TF  C     P L L +
Sbjct: 404 VYQCNASNEHGYLLANAFVSVLDMAPRMLGPKNQLIKVIENNRTFLECPFFGSP-LPL-L 461

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            W +       +    +   ++ +L + ++   D G YTC A   L  +E Q  L V+ P
Sbjct: 462 RWFKNGLGSGLDGG-HYRLYHNGTLEIKQAQTEDQGTYTCVASIILGKMENQVRLEVKEP 520



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 125/300 (41%), Gaps = 40/300 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDT-----GNY 195
           + +  EC+A G P P   W  NGK       +PR  +     T+E +R S       G Y
Sbjct: 58  DNIIIECEAKGNPVPTFQWRRNGK-FFNVGKDPRVTMRSRSGTLE-IRSSGKPEDYEGEY 115

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A+N+LG    +  +  ++ +P   +   +  TV +G  +VL C    G P PE  W+
Sbjct: 116 QCFASNNLGTAISNKILLRVSKSPLWPKEVLEPVTVREGSPLVLACNPPPGLPPPETFWM 175

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSG-EYTCFARNKLG-TAQGSGSLTVKEHTH 309
            +         R ++   GDL  ++V   D+  +Y+C AR +   T Q     T+K  T 
Sbjct: 176 DSFIMPIAQDRRVSMGLNGDLFFSNVLAKDAKTDYSCNARFEFTHTIQQKNPYTLKVQT- 234

Query: 310 ITDQPEDY-------------EVEAGQSATFRCNAVSDPSLKLSIVW-LRGSEPIDFESE 355
           + + PE                V  G+     C A   P+   +I W  RG    D  ++
Sbjct: 235 MRNIPETQPTFLSPTGLSSTKMVLRGEELLLECIAAGVPT--PTITWSKRGG---DLPTK 289

Query: 356 PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP-----LEAPSNFTL 410
              + + D +L +   SE D G YTC A   +  I  + T+ VQV      LE P N  L
Sbjct: 290 KVRIGNFDKTLRILNVSEEDIGSYTCMASNRIGSI--RHTVEVQVKAAPFWLEKPINLVL 347


>gi|134085176|emb|CAM60068.1| unnamed protein product [Danio rerio]
          Length = 744

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/360 (35%), Positives = 192/360 (53%), Gaps = 8/360 (2%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           ++ LR +++ L CI  G P P   WSK G  + P+ ++  GN+ K+L I +V   D GSY
Sbjct: 255 KMVLRGEELLLECIAAGVPTPTITWSKRGGDL-PTKKVRIGNFDKTLRILNVSEEDIGSY 313

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
           TC  SN +G  + +++++ V AAP++  +P  +  A +E+    C+A+G P+P I W+ N
Sbjct: 314 TCMASNRIGSIR-HTVEVQVKAAPFWLEKPINLVLAPDESGRLVCRANGSPKPTIQWLVN 372

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           G+PI  + PNP R+V  + I  E ++   +  Y CNA+N  GY+  + +V+VL  AP + 
Sbjct: 373 GEPIESSLPNPNRRVLDDTIIFETVQFESSAVYQCNASNEHGYLLANAFVSVLDMAPRML 432

Query: 223 EAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHN--QKELTGGRYTILETGDLKITDVA 278
             PK++    ++     L C  FG+P P + W  N     L GG Y +   G L+I    
Sbjct: 433 -GPKNQLIKVIENNRTFLECPFFGSPLPLLRWFKNGLGSGLDGGHYRLYHNGTLEIKQAQ 491

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
             D G YTC A   LG  +    L VKE T I   PE      G +  F C    DPSL 
Sbjct: 492 TEDQGTYTCVASIILGKMENQVRLEVKEPTRIVRAPEHKTEPRGTTVRFDCRVKHDPSLP 551

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
            ++ WL+  +P+ F    R ++ +D SLT+   +  D G YTC A+TE+D   A A LTV
Sbjct: 552 ATVTWLKDEKPLSFSWIGR-LKKDDESLTIYNVNPDDGGTYTCTAKTEIDEDTASARLTV 610



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 127/319 (39%), Gaps = 43/319 (13%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G+P P   W  +G PI     NP+ R+       ++I + V+F     Y C  S
Sbjct: 355 LVCRANGSPKPTIQWLVNGEPIESSLPNPNRRV----LDDTIIFETVQFESSAVYQCNAS 410

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  +SVL      + P  + I   E      EC   G P P + W  NG  
Sbjct: 411 NEHGYLLANAF-VSVLDMAPRMLGPKNQLIKVIENNRTFLECPFFGSPLPLLRWFKNGLG 469

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
            S       R      + I+  +  D G Y C A+  LG +   V + V      I  AP
Sbjct: 470 -SGLDGGHYRLYHNGTLEIKQAQTEDQGTYTCVASIILGKMENQVRLEV-KEPTRIVRAP 527

Query: 226 KDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRYTILETGD--LKITDVAFAD 281
           + +    G TV   CRV   P     V W+ ++K L+      L+  D  L I +V   D
Sbjct: 528 EHKTEPRGTTVRFDCRVKHDPSLPATVTWLKDEKPLSFSWIGRLKKDDESLTIYNVNPDD 587

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHIT-----------DQPEDYEVEAGQSATFRCN 330
            G YTC A+ ++     S  LTV E+   +           D P+D E            
Sbjct: 588 GGTYTCTAKTEIDEDTASARLTVTENDSSSASNRSASAGRPDPPQDLE------------ 635

Query: 331 AVSDPSLK-LSIVWLRGSE 348
            +SDPS + + + W+ G+E
Sbjct: 636 -LSDPSARSVRLTWVPGNE 653



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 151/360 (41%), Gaps = 32/360 (8%)

Query: 64  QTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSDQGSYTC----EVSNGVGEAKSYSI 118
           +T W    + PI    R+S G  G       +    +  Y+C    E ++ + +   Y++
Sbjct: 171 ETFWMDSFIMPIAQDRRVSMGLNGDLFFSNVLAKDAKTDYSCNARFEFTHTIQQKNPYTL 230

Query: 119 DLSVL-----AAPYFTVEPEFINAAEE----ETVTFECKASGLPEPEIHWVHNGKPISQA 169
            +  +       P F + P  +++ +     E +  EC A+G+P P I W   G  +   
Sbjct: 231 KVQTMRNIPETQPTF-LSPTGLSSTKMVLRGEELLLECIAAGVPTPTITWSKRGGDL--- 286

Query: 170 PPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKD 227
            P  + ++G     + I N+ + D G+Y C A+N +G +   V V V A AP   E P +
Sbjct: 287 -PTKKVRIGNFDKTLRILNVSEEDIGSYTCMASNRIGSIRHTVEVQVKA-APFWLEKPIN 344

Query: 228 EYTVDGKTVVLTCRVFGAPKPEVNWIHN----QKELTGGRYTILETGDLKITDVAFADSG 283
                 ++  L CR  G+PKP + W+ N    +  L      +L+   +    V F  S 
Sbjct: 345 LVLAPDESGRLVCRANGSPKPTIQWLVNGEPIESSLPNPNRRVLD-DTIIFETVQFESSA 403

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS-ATF-RCNAVSDPSLKLSI 341
            Y C A N+ G    +  ++V +       P++  ++  ++  TF  C     P L L +
Sbjct: 404 VYQCNASNEHGYLLANAFVSVLDMAPRMLGPKNQLIKVIENNRTFLECPFFGSP-LPL-L 461

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            W +       +    +   ++ +L + ++   D G YTC A   L  +E Q  L V+ P
Sbjct: 462 RWFKNGLGSGLDGG-HYRLYHNGTLEIKQAQTEDQGTYTCVASIILGKMENQVRLEVKEP 520



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 125/300 (41%), Gaps = 40/300 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDT-----GNY 195
           + +  EC+A G P P   W  NGK       +PR  +     T+E +R S       G Y
Sbjct: 58  DNIIIECEAKGNPVPTFQWRRNGK-FFNVGKDPRVTMRSRSGTLE-IRSSGKPEDYEGEY 115

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A+N+LG    +  +  ++ +P   +   +  TV +G  +VL C    G P PE  W+
Sbjct: 116 QCFASNNLGTAISNKILLRVSKSPLWPKEVLEPVTVREGSPLVLACNPPPGLPPPETFWM 175

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSG-EYTCFARNKLG-TAQGSGSLTVKEHTH 309
            +         R ++   GDL  ++V   D+  +Y+C AR +   T Q     T+K  T 
Sbjct: 176 DSFIMPIAQDRRVSMGLNGDLFFSNVLAKDAKTDYSCNARFEFTHTIQQKNPYTLKVQT- 234

Query: 310 ITDQPEDY-------------EVEAGQSATFRCNAVSDPSLKLSIVW-LRGSEPIDFESE 355
           + + PE                V  G+     C A   P+   +I W  RG    D  ++
Sbjct: 235 MRNIPETQPTFLSPTGLSSTKMVLRGEELLLECIAAGVPT--PTITWSKRGG---DLPTK 289

Query: 356 PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP-----LEAPSNFTL 410
              + + D +L +   SE D G YTC A   +  I  + T+ VQV      LE P N  L
Sbjct: 290 KVRIGNFDKTLRILNVSEEDIGSYTCMASNRIGSI--RHTVEVQVKAAPFWLEKPINLVL 347


>gi|348543836|ref|XP_003459388.1| PREDICTED: neurofascin-like [Oreochromis niloticus]
          Length = 1342

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/362 (35%), Positives = 192/362 (53%), Gaps = 10/362 (2%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           ++ LR++++ L CI  G P P   W K G  + P  ++   N+ K+L I  V   D G Y
Sbjct: 257 KMVLRDEQLLLECIAAGLPTPIIKWFKKGGEL-PGQKVKFENFNKTLKIVSVSEEDAGEY 315

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C  +N +G  + +SI + V AAPY+ V+P     A EET    C+A+G P+P I W+ N
Sbjct: 316 VCMANNHLGTIR-HSIFVQVKAAPYWLVKPSDQVLAPEETGRLICRANGNPKPHIEWLVN 374

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           G+PI  +P NP R+V  + I   +++   +  Y CNA+N  GY+  + +VNVL   P + 
Sbjct: 375 GQPIESSPTNPNRQVLGDTIIFRSVQIGSSAVYQCNASNEHGYLLANAFVNVLDLPPRML 434

Query: 223 EAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVA 278
             PK++    +      L C  FG+P PE+ W  N +   L GG+Y +   G L+I    
Sbjct: 435 -GPKNQLIKVIKNNRTFLDCPFFGSPLPELRWFKNGQGSGLDGGQYRVYINGTLEIKRAQ 493

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
             D G YTC A + LG A+    L VKE T I   PE      G +A F C   SDPSL 
Sbjct: 494 AEDEGTYTCVASSILGKAENQVRLEVKEPTRIIQAPEHQSAIRGSTARFTCRVTSDPSLP 553

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           +S+ W++  +P+        ++ +D SL++   +E D G YTC  ++E+D + A A LTV
Sbjct: 554 VSVAWMKDDKPLYLGWR---LKKDDESLSIPNVNEGDEGTYTCTVKSEIDQLSASARLTV 610

Query: 399 QV 400
            V
Sbjct: 611 LV 612



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 137/572 (23%), Positives = 232/572 (40%), Gaps = 62/572 (10%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG----PNRITIENLRKSDTGNY 195
           +E +  EC A+GLP P I W   G  +      P +KV        + I ++ + D G Y
Sbjct: 262 DEQLLLECIAAGLPTPIIKWFKKGGEL------PGQKVKFENFNKTLKIVSVSEEDAGEY 315

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            C A N LG +   ++V V A AP     P D+     +T  L CR  G PKP + W+ N
Sbjct: 316 VCMANNHLGTIRHSIFVQVKA-APYWLVKPSDQVLAPEETGRLICRANGNPKPHIEWLVN 374

Query: 256 QKEL----TGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            + +    T     +L  GD  I   V    S  Y C A N+ G    +  + V +    
Sbjct: 375 GQPIESSPTNPNRQVL--GDTIIFRSVQIGSSAVYQCNASNEHGYLLANAFVNVLDLPPR 432

Query: 311 TDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
              P++   +V         C     P  +L   W +  +    +     V  N  +L +
Sbjct: 433 MLGPKNQLIKVIKNNRTFLDCPFFGSPLPELR--WFKNGQGSGLDGGQYRVYING-TLEI 489

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAK-KAVVSWN 424
            ++   D G YTC A + L   E Q  L V+ P   ++AP + + I+   A+    V+ +
Sbjct: 490 KRAQAEDEGTYTCVASSILGKAENQVRLEVKEPTRIIQAPEHQSAIRGSTARFTCRVTSD 549

Query: 425 PVSPQSL------RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTT------TEVDKFVP 472
           P  P S+      +  + G++++    KD E S+    VN+G+  T      +E+D+ + 
Sbjct: 550 PSLPVSVAWMKDDKPLYLGWRLK----KDDE-SLSIPNVNEGDEGTYTCTVKSEIDQ-LS 603

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
           AS     ++ F  +        +S   P+        L+     + +  L W+  +    
Sbjct: 604 ASARLTVLVCFCVSDTSKAMSCLSSARPD----PPIDLDLSDPAARSVRLTWIPGKDHRS 659

Query: 533 VLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 592
            +  + ++++  +  + G       Y  D  +   +LA   P   Y+  +      G   
Sbjct: 660 PITEFLVQFEEDRW-EPGRWQNLSSYPGDLNSVILQLA---PFVNYQFRVIAINSVGQSD 715

Query: 593 ES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
            S      K     P   P  + G GS  +N+ I+W  + ++E N P+  Y ++WRR + 
Sbjct: 716 PSRPSPRYKTTGAAPDAIPKGLRGWGSRKDNMEITWEPLLDLERNGPNLHYIVWWRRKDV 775

Query: 647 GEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            E WN    L  +    V+ N   + PYEIK+
Sbjct: 776 EEEWNNVTTLGAKH---VVHNTEIYVPYEIKI 804



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 11/200 (5%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD---GEGSIRELIV 457
            P +AP++  + +V D+ K ++ WNPV   S++G F+ Y++  W E     G   I++  +
Sbjct: 828  PTDAPTDLRVSKV-DSTKVIIHWNPVDLNSVQGEFKEYRLYYWRESSQVPGLVVIKDKKI 886

Query: 458  NKGESTTTE----VDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAI 513
                STT +    +   VP S     ++  N  +   PS  + F T EGVP   +  +  
Sbjct: 887  KGFYSTTVKPSGMLSDLVPYSNYKMFMVVANNRFESQPSNTVEFTTKEGVPDAPRFFKIN 946

Query: 514  PLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLE 573
                   +L+W KP +PNG+L GY++KYQ+V G+KVGP      +   P  T   L   +
Sbjct: 947  RRSLDTIHLEWAKPLEPNGILTGYQLKYQTVNGSKVGPFQLETFF---PNVTEFFLRVPD 1003

Query: 574  PSTKYRIHLAGYTKAGDGAE 593
             S++Y+  L+  T+ G G +
Sbjct: 1004 RSSRYKFFLSALTQVGKGED 1023


>gi|317419599|emb|CBN81636.1| Protein sidekick-2 [Dicentrarchus labrax]
          Length = 2147

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 185/607 (30%), Positives = 270/607 (44%), Gaps = 36/607 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           R   V     +V + C+    PL +    W K+GV +         ++ + L I     S
Sbjct: 174 RNTSVVTGTSEVTMECVANARPLIKLSISWRKNGVLVTSG----LSDFNRRLTILSPVVS 229

Query: 98  DQGSYTCEVSNGVGEAKSYSID--LSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPE 154
           D G Y CE         S S    L VL  P F  EPE  I A  E+ V   C+A G+P+
Sbjct: 230 DAGYYECEAILRSSSVPSVSAGAYLHVLEPPQFIKEPEKHITAEMEKVVDIPCQARGVPQ 289

Query: 155 PEIHWVHNGKPISQAP-PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P+I W  +  PI     P  R  VG   + +  L   DTG + C A N  G V  + Y+ 
Sbjct: 290 PDIVWYKDALPIDPVKTPRYRVLVG-GSLQVNGLLPDDTGMFQCFARNRAGEVQTNTYLA 348

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V + AP IT  P D   +DG +V+L C   GAP+P + W   ++ L  G     R+T+LE
Sbjct: 349 VTSIAPNITAGPSDSTVIDGMSVILHCETSGAPRPAITWQKGERVLASGSVQLPRFTLLE 408

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A   
Sbjct: 409 SGSLLISPSHISDAGTYTCMASNSRGIDEASADLVVWARTRITTPPQDQSVIKGTKAIMT 468

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C    DPS+ +  VW +    I+ +S PR     D +L ++++   D G YTCR  +   
Sbjct: 469 CGVTHDPSVTVRHVWEKEGSVINVQSIPRMRLDADGTLHISQTWSGDIGTYTCRVTSVGG 528

Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV-VSWNPVSPQSLRGHFRGYKVQTWTEKD 447
                A L V+    AP N T +     K+A+ ++W    P         Y ++  +E +
Sbjct: 529 NDSRSAHLRVRQLPHAPENPTAMLSTSEKRAIDLAW--AKPFDGNSPLIRYILEV-SENN 585

Query: 448 GEGSIRELIVN-KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT-PEGVPG 505
              +I  L+ N + EST   V+  +PA     R+ A N    G  S+    V+ PE  P 
Sbjct: 586 APWAI--LLANIEPESTAVTVNGLIPARSYQFRLCAVNDVGKGQFSKETDRVSLPEEPPS 643

Query: 506 TV-QSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              Q++ A    + +  ++W  P +   NG+L GY ++Y+ + G    P+  ++  IS P
Sbjct: 644 AAPQNVIASGRTNQSIMIQWQPPPESHQNGILRGYTVRYR-LTGL---PVDYQIKNISSP 699

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNN 617
             T+  L  L   T Y I +A Y  AG G  S       L  VP   P NV+        
Sbjct: 700 DVTNLLLEDLIIWTNYEIEVAAYNGAGLGTFSHKVTEWTLQGVPTIAPGNVQAESVNSTT 759

Query: 618 LVISWTA 624
           +  +WTA
Sbjct: 760 IRFTWTA 766



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 169/670 (25%), Positives = 260/670 (38%), Gaps = 95/670 (14%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE-VSNGVGEAK-SYSI 118
           P PQ  W +DG  I PS RI+      +L+I      D G Y  + V++  GE K S  I
Sbjct: 93  PQPQVTWFRDGRKIPPSSRIAI-TLDNTLVILSTVAPDAGRYYVQAVNDKNGENKTSQPI 151

Query: 119 DLSV--LAAPYFTVEPEFINAAEEET-------VTFECKASGLP--EPEIHWVHNGKPIS 167
            LSV  +  P   + P  I      +       VT EC A+  P  +  I W  NG  ++
Sbjct: 152 TLSVENVGGPADPIAPTIIIPPRNTSVVTGTSEVTMECVANARPLIKLSISWRKNGVLVT 211

Query: 168 QAPPNPRRKVGPNRITIENLRKSDTGNYGCNA---TNSLGYVYKDVYVNVLAHAPEITEA 224
               +  R     R+TI +   SD G Y C A   ++S+  V    Y++VL   P+  + 
Sbjct: 212 SGLSDFNR-----RLTILSPVVSDAGYYECEAILRSSSVPSVSAGAYLHVL-EPPQFIKE 265

Query: 225 PKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITDVAFA 280
           P+   T + + VV + C+  G P+P++ W  +      +   RY +L  G L++  +   
Sbjct: 266 PEKHITAEMEKVVDIPCQARGVPQPDIVWYKDALPIDPVKTPRYRVLVGGSLQVNGLLPD 325

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKE-HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           D+G + CFARN+ G  Q +  L V     +IT  P D  V  G S    C     P  + 
Sbjct: 326 DTGMFQCFARNRAGEVQTNTYLAVTSIAPNITAGPSDSTVIDGMSVILHCETSGAP--RP 383

Query: 340 SIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +I W +G   +   S   PRF      SL ++ S   D+G YTC A       EA A L 
Sbjct: 384 AITWQKGERVLASGSVQLPRFTLLESGSLLISPSHISDAGTYTCMASNSRGIDEASADLV 443

Query: 398 V--QVPLEAP---------------------SNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
           V  +  +  P                      + T+  V + + +V++   +    L   
Sbjct: 444 VWARTRITTPPQDQSVIKGTKAIMTCGVTHDPSVTVRHVWEKEGSVINVQSIPRMRLDAD 503

Query: 435 FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
              +  QTW+   G  + R   V   +S +  +           RV     A        
Sbjct: 504 GTLHISQTWSGDIGTYTCRVTSVGGNDSRSAHL-----------RVRQLPHA-------- 544

Query: 495 ISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLE 554
                PE     + + E       A  L W KP   N  L+ Y ++  S        LL 
Sbjct: 545 -----PENPTAMLSTSE-----KRAIDLAWAKPFDGNSPLIRYILEV-SENNAPWAILLA 593

Query: 555 RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV------PFKNPDNV 608
            +    +P +T+  + GL P+  Y+  L      G G  SK    V      P   P NV
Sbjct: 594 NI----EPESTAVTVNGLIPARSYQFRLCAVNDVGKGQFSKETDRVSLPEEPPSAAPQNV 649

Query: 609 EGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQ 668
              G T  +++I W   PE   N     Y + +R       +   ++     + L+L + 
Sbjct: 650 IASGRTNQSIMIQWQPPPESHQNGILRGYTVRYRLTGLPVDYQIKNISSPDVTNLLLEDL 709

Query: 669 PTFQPYEIKV 678
             +  YEI+V
Sbjct: 710 IIWTNYEIEV 719



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 145/591 (24%), Positives = 223/591 (37%), Gaps = 76/591 (12%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEV 106
           V L C   G P P   W K G  +  S  +    +      SL+I     SD G+YTC  
Sbjct: 371 VILHCETSGAPRPAITWQK-GERVLASGSVQLPRFTLLESGSLLISPSHISDAGTYTCMA 429

Query: 107 SN--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--WVHN 162
           SN  G+ EA   S DL V A    T  P+  +  +       C  +  P   +   W   
Sbjct: 430 SNSRGIDEA---SADLVVWARTRITTPPQDQSVIKGTKAIMTCGVTHDPSVTVRHVWEKE 486

Query: 163 GKPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAP 219
           G  I+ Q+ P  R       + I      D G Y C  T+  G   +  ++ V  L HAP
Sbjct: 487 GSVINVQSIPRMRLDAD-GTLHISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQLPHAP 545

Query: 220 EITEAPKDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTIL-----ETGDLK 273
           E   A     T + + + L   + F    P + +I    E       +L     E+  + 
Sbjct: 546 ENPTAMLS--TSEKRAIDLAWAKPFDGNSPLIRYILEVSENNAPWAILLANIEPESTAVT 603

Query: 274 ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS--ATFRCNA 331
           +  +  A S ++   A N +G  Q S      + T     PE+    A Q+  A+ R N 
Sbjct: 604 VNGLIPARSYQFRLCAVNDVGKGQFS------KETDRVSLPEEPPSAAPQNVIASGRTNQ 657

Query: 332 VSDPSLKLSIVW-----------LRG--------SEPIDFE----SEPRFVQSNDYSLTV 368
                  + I W           LRG          P+D++    S P         L +
Sbjct: 658 ------SIMIQWQPPPESHQNGILRGYTVRYRLTGLPVDYQIKNISSPDVTNLLLEDLII 711

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
             + E++   Y             + TL   VP  AP N    + +++     +W   +P
Sbjct: 712 WTNYEIEVAAYNGAGLGTFSHKVTEWTLQ-GVPTIAPGNVQA-ESVNSTTIRFTWTAPNP 769

Query: 429 QSLRGHFRGYKVQTWTE-KDGEGSIRELIVNKGEST----TTEVDKFVPASKNFARVLAF 483
           Q + G  +GYK+  W   +D E S+  +  N  +S        + KF   ++ +  VL F
Sbjct: 770 QFINGINQGYKLLAWEPGRDEEVSMVTVRPNFQDSVHVGYVMGLKKF---TEYYTSVLCF 826

Query: 484 NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQS 543
               +GP S   +  T E  PG V  L    +  ++  + W +P + NGVL GY+I ++ 
Sbjct: 827 TTPGDGPRSPPKALRTHEDTPGAVGHLSFTEILDTSLKVSWSEPGEKNGVLTGYRISWEE 886

Query: 544 VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
              T       R+ +     T   ++ GL   T Y I +AG T  G G  S
Sbjct: 887 YNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAGMTSKGQGQLS 932



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 22/186 (11%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW--TEKDGEGSIRELIV 457
            VP   P N   IQ   A +  V+W+P    +  G  +GYKV  W    K+    +R L +
Sbjct: 1573 VPTAPPQNVA-IQSATATQLDVTWDPPPVDAQNGDIQGYKVYFWEFQRKNETERLRTLFM 1631

Query: 458  NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS 517
             +G     ++      +     V  FN A +GP S      T +  P     +    L +
Sbjct: 1632 PEG---GVKLKNLTGYTTYMISVAPFNAAGDGPRSPPTRGRTQQAAPSAPSFIHFSELTT 1688

Query: 518  SAFYLKWVKPEQPNGVLMGYKIKYQ--------------SVKGTKVGPLLERLPYISDPT 563
            ++  + W +P  PNG++ GY++ Y+               VKG+  GPL  +L  ++D  
Sbjct: 1689 TSVNVSWGEPTFPNGIIEGYRLVYEPCTPVDGVSKTVTVDVKGS--GPLWLKLRDLADGI 1746

Query: 564  TTSAKL 569
            T + ++
Sbjct: 1747 TYNFRI 1752



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 77/317 (24%), Positives = 129/317 (40%), Gaps = 64/317 (20%)

Query: 379  YTCRAQTELDFIEAQATLTVQVPLEA---PSNFTLI--QVIDAKKAVVSWNP----VSPQ 429
            +   AQT   + EA   L V     A   P++  ++  + + A++ ++ W P    +SP 
Sbjct: 1325 FRITAQTRKGWGEAAEALVVTTEKRARPQPTSRPMVPQEDVQARQVLLLWEPGSDGLSP- 1383

Query: 430  SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
                  R Y VQ     +   ++    VN  E+T+  V +  P +    RV A N   + 
Sbjct: 1384 -----VRYYTVQHRELPESNWTVHSASVNH-EATSYIVSRLKPFTSYQFRVKATNDIGDS 1437

Query: 490  PPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQ 542
              SE    +T     P+  P     L   P  +++  ++W  P  E+ NG+L+G++I+Y+
Sbjct: 1438 EYSEESEAITTLQDAPDEAPTI---LSVTPHTTTSVLIRWQPPSEEKINGILLGFRIRYR 1494

Query: 543  SVKGTKVGPLLERL-------------------PY----ISDPTTTSAKLAGLEPSTKYR 579
             +       L +RL                   PY    +SD T    +L  L    +Y 
Sbjct: 1495 EL-------LYDRLRSYSVHTINSASTWAELNAPYSIRNLSDSTLIQYELDKLSKHKRYE 1547

Query: 580  IHLAGYTKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPH 634
            I ++ Y   G+G  S  + +F    VP   P NV  + +T   L ++W   P    N   
Sbjct: 1548 IRMSVYNAVGEGPASSPQEVFVGEAVPTAPPQNVAIQSATATQLDVTWDPPPVDAQNGDI 1607

Query: 635  FKYRI-FW--RRHNTGE 648
              Y++ FW  +R N  E
Sbjct: 1608 QGYKVYFWEFQRKNETE 1624



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 82/199 (41%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N +      +   +V W  V      G   GYKV  + EKD + ++    V  
Sbjct: 1150 VPSCGPTNVSAFATT-SSSILVRWFEVPEPDRNGLILGYKV-VYKEKDSDSTVHFWTVEG 1207

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              + + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1208 NATHSVQLTGLGKYVLYEIQVLAFTRIGDGRPSSPPILERTLDDVPGPPVGILFPEVRTT 1267

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P QPNG+++ Y+I Y           ++ L    +P+     +  L+P + Y
Sbjct: 1268 SVRLIWQSPSQPNGIILAYQITYHLNSTNSNTATVDVL----NPSARQYTVTSLKPESVY 1323

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1324 VFRITAQTRKGWGEAAEAL 1342



 Score = 38.9 bits (89), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 65/308 (21%), Positives = 126/308 (40%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q +L    + +T++  VP E P   T + + +          
Sbjct: 910  LTALTTYTIEVAGMTSKGQGQL----SSSTISSGVPPELPGPPTNMAISN---------- 955

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE--------LIVNKGESTTTEVDKFVP 472
            + P+S+   F+ GY  +T    W  +   G + E         + N+ E+ + EV    P
Sbjct: 956  IGPRSVTLQFKPGYDGKTSISRWQVEAQVGVVGENEDWVTVHQVSNEPEARSLEVPGLNP 1015

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 1016 YTFYRFRMRQVNIVGISPPSQPSRKIQTLPAPPDMAPANVTLRTA---SETSLWLRWMPL 1072

Query: 527  PE---QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GY+++Y S  G++   L+     I+D       +  LE  T+Y + + 
Sbjct: 1073 PEWEYNGNAEQVGYRVQY-SRAGSQGRALIH---IIADRQEREFTIEDLEEWTEYEVRVQ 1128

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
                 G G  S+ +       VP   P NV    +T +++++ W  +PE + N     Y+
Sbjct: 1129 AVNGIGMGPWSQPVRGRTRESVPSCGPTNVSAFATTSSSILVRWFEVPEPDRNGLILGYK 1188

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1189 VVYKEKDS 1196


>gi|193783619|dbj|BAG53530.1| unnamed protein product [Homo sapiens]
          Length = 591

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/364 (36%), Positives = 188/364 (51%), Gaps = 10/364 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 224 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 282

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 283 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 341

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 342 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 401

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+ +    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 402 PRML-SPRHQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 460

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED     G +    C    D
Sbjct: 461 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVHLECRVKHD 520

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD   A+A
Sbjct: 521 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 577

Query: 395 TLTV 398
            LTV
Sbjct: 578 YLTV 581



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 142/365 (38%), Gaps = 32/365 (8%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 139 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 197

Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +++ +               P  T   + +    +  +  EC ASG+P P+I W   
Sbjct: 198 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 255

Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP  
Sbjct: 256 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 311

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
            + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +   D
Sbjct: 312 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 369

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              +    Y C   N+ G    +  ++V +       P    +        R +     S
Sbjct: 370 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRHQLIRVILYNRTRLDCPFFGS 429

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E Q  L
Sbjct: 430 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 488

Query: 397 TVQVP 401
            V+ P
Sbjct: 489 EVKDP 493



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 19/211 (9%)

Query: 15  ILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI 74
           +L N   + +       +P+ Q +     V L N+   L C F G+P+P   W K+G   
Sbjct: 389 LLANAFVSVLDVPPRMLSPRHQLI----RVILYNR-TRLDCPFFGSPIPTLRWFKNGQGS 443

Query: 75  NPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV 130
           N    +  GNY      SL IK +   DQG YTC  +N +G+A++  + L V        
Sbjct: 444 N----LDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAEN-QVRLEVKDPTRIYR 498

Query: 131 EPEFINAAEEETVTFECKASGLPEPE--IHWVHNGKPISQAPPNPRRKVGPNRITIENLR 188
            PE   A    TV  EC+    P  +  + W+ + +P+       R K   + +TI  + 
Sbjct: 499 MPEDQVARRGTTVHLECRVKHDPSLKLTVSWLKDDEPLYIGN---RMKKEDDSLTIFGVA 555

Query: 189 KSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
           + D G+Y C A+  L       Y+ VL + P
Sbjct: 556 ERDQGSYTCVASTELDQDLAKAYLTVLGNCP 586



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 117/297 (39%), Gaps = 30/297 (10%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGN 194
            + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G 
Sbjct: 28  RDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGE 87

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNW 252
           Y C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W
Sbjct: 88  YQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFW 147

Query: 253 IHNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK--- 305
           + +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K   
Sbjct: 148 MSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLT 207

Query: 306 -----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
                E T     P+       V  G      C A   P+    I W +     D  S+ 
Sbjct: 208 TRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDK 263

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
              ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 264 AKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 320



 Score = 47.4 bits (111), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++  
Sbjct: 7   NELTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 66

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
                + D           GEY CFARNK GTA     L+ +    ++  P    E+ + 
Sbjct: 67  RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 121

Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 122 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 177

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
           D    Y+C A+      I+ +   T++V
Sbjct: 178 DMQTDYSCNARFHFTHTIQQKNPFTLKV 205


>gi|237858641|ref|NP_001153792.1| neurofascin isoform 4 precursor [Gallus gallus]
          Length = 1170

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/395 (34%), Positives = 204/395 (51%), Gaps = 15/395 (3%)

Query: 37  YVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEF 96
           Y T   ++ LR   + L CI  G P P  +W K G  + P+ +    N+ K+L I +V  
Sbjct: 262 YGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGGEL-PAGKTKLENFNKALRISNVSE 320

Query: 97  SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE 156
            D G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P 
Sbjct: 321 EDSGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPQNLILAPGEDGRLVCRANGNPKPS 379

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           I W+ NG+PI  +PPNP R+V  + I   + +   +  Y CNA+N  GY+  + +V+VL 
Sbjct: 380 IQWLVNGEPIEGSPPNPSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLD 439

Query: 217 HAPEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDL 272
             P I  AP+++    +      L C  FG+P P + W  N +   L GG Y   E G L
Sbjct: 440 VPPRIL-APRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQGNMLDGGNYKAHENGSL 498

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV 332
           +++     D G YTC A N LG  +    L VK+ T I   PED  V+ G      C   
Sbjct: 499 EMSMARKEDQGIYTCVATNILGKVEAQVRLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVK 558

Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
            DP+LKL++ WL+   P+   +    ++  D  LT+   +E D G YTC A TELD   A
Sbjct: 559 HDPTLKLTVTWLKDDAPLYIGNR---MKKEDDGLTIYGVAEKDQGDYTCVASTELDKDSA 615

Query: 393 QATLTVQVPLEAPSNFTLIQVID-AKKAV-VSWNP 425
           +A LTV   LE P     +++ D A+++V ++W P
Sbjct: 616 KAYLTV---LERPDRPRDLELSDLAERSVKLTWIP 647



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 144/629 (22%), Positives = 238/629 (37%), Gaps = 96/629 (15%)

Query: 15   ILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI 74
            +L N   + +       AP+ Q +       ++  +  L C F G+P+P   W K+G   
Sbjct: 429  LLANAFVSVLDVPPRILAPRNQLIK-----VIQYNRTRLDCPFFGSPIPTLRWFKNG--- 480

Query: 75   NPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV 130
               + +  GNY      SL +      DQG YTC  +N +G+ ++  + L V        
Sbjct: 481  -QGNMLDGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEA-QVRLEVKDPTRIVR 538

Query: 131  EPEFINAAEEETVTFECKASGLPEPE--IHWVHNGKPISQAPPNPRRKVGPNRITIENLR 188
             PE             C+    P  +  + W+ +  P+       R K   + +TI  + 
Sbjct: 539  GPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGN---RMKKEDDGLTIYGVA 595

Query: 189  KSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD--GKTVVLT------- 239
            + D G+Y C A+  L       Y+ VL    E  + P+D    D   ++V LT       
Sbjct: 596  EKDQGDYTCVASTELDKDSAKAYLTVL----ERPDRPRDLELSDLAERSVKLTWIPGDDN 651

Query: 240  -------CRVFGAPKPEVNWIHNQKELTGG--------------RYTILETGDLKITDVA 278
                      F   + +    HN     G               ++ ++   D+  +  +
Sbjct: 652  NSPITDYIVQFEEDRFQPGTWHNHSRYPGNVNSALLSLSPYVNYQFRVIAVNDVGSSLPS 711

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
                   T  AR ++      G+ T K +  IT  P +     G            P+L+
Sbjct: 712  MPSERYQTSGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYG------------PNLR 759

Query: 339  LSIVWLR----GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
              + W R    GS   +    PR V  N                Y  + Q E DF  A  
Sbjct: 760  YIVRWRRRDPRGSWYNETVKAPRHVVWNTPIYV----------PYEIKVQAENDFGRAPE 809

Query: 395  TLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
              T         P  AP++   I+V+++    ++W  V   +++G  + Y+   W +   
Sbjct: 810  PETYIGYSGEDYPKAAPTDVR-IRVLNSTAIALTWTRVHLDTIQGQLKEYRAYFWRDSSL 868

Query: 449  EGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGV 503
              ++     R+ +   G+     V +  P S     ++  NG  +GP SE+  F TPEGV
Sbjct: 869  LKNLWVSKKRQYVSFPGDRNRGIVSRLFPYSNYKLEMVVTNGRGDGPRSEVKEFPTPEGV 928

Query: 504  PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVG-PLLERLPYISDP 562
            P + + L        +  L+W  PE PNGVL GY ++YQ+  G+K G  L+E       P
Sbjct: 929  PSSPRYLRIRQPNLESINLEWDHPEHPNGVLTGYNLRYQAFNGSKTGRTLVENF----SP 984

Query: 563  TTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
              T   +   +P ++YR  L   T+ GDG
Sbjct: 985  NQTRFTVQRTDPISRYRFFLRARTQVGDG 1013



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 150/672 (22%), Positives = 252/672 (37%), Gaps = 116/672 (17%)

Query: 73  PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGEAKSYSIDLSV----- 122
           PI+   R+SQG  G  L   +V   D Q  Y+C      ++ + +   Y++ +       
Sbjct: 177 PIHQDKRVSQGQNG-DLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTKKPHN 235

Query: 123 ----------------------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV 160
                                    PY T   + +    +  +  EC ASG+P P+I W 
Sbjct: 236 ETSLRNHTDMYSARGVTETTPSFMYPYGTSSSQMVLRGVD--LLLECIASGVPAPDIMWY 293

Query: 161 HNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
             G    + P    +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP
Sbjct: 294 KKG---GELPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-AP 349

Query: 220 EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKI 274
              + P++     G+   L CR  G PKP + W+ N + + G      R    +T  +  
Sbjct: 350 YWLDEPQNLILAPGEDGRLVCRANGNPKPSIQWLVNGEPIEGSPPNPSREVAGDT--IVF 407

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
            D     S  Y C A N+ G    +  ++V +       P +  ++  Q    R +    
Sbjct: 408 RDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRILAPRNQLIKVIQYNRTRLDCPFF 467

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
            S   ++ W +  +    +        N  SL ++ + + D G YTC A   L  +EAQ 
Sbjct: 468 GSPIPTLRWFKNGQGNMLDGGNYKAHENG-SLEMSMARKEDQGIYTCVATNILGKVEAQV 526

Query: 395 TLTVQVPLE--------------APSNFTLIQVIDAKKAVVSW-NPVSPQSLRGHFR--- 436
            L V+ P                 P     ++     K  V+W    +P  +    +   
Sbjct: 527 RLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKED 586

Query: 437 -GYKVQTWTEKDGEGSIRELIVNKGEST---TTEVDKFVPASKNFARVLAFNGAYNGPPS 492
            G  +    EKD           +G+ T   +TE+DK   ++K +  VL           
Sbjct: 587 DGLTIYGVAEKD-----------QGDYTCVASTELDK--DSAKAYLTVLE---------- 623

Query: 493 EIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPL 552
                      P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G  
Sbjct: 624 ----------RPDRPRDLELSDLAERSVKLTWIPGDDNNSPITDYIVQFEEDR-FQPGTW 672

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES----KYLF--YVPFKNPD 606
                Y   P   ++ L  L P   Y+  +      G    S    +Y      P  NP 
Sbjct: 673 HNHSRY---PGNVNSALLSLSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPT 729

Query: 607 NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLA 666
            V+G G+  NN+ I+WT +   +   P+ +Y + WRR +   +W  + V   R    V+ 
Sbjct: 730 GVQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRH---VVW 786

Query: 667 NQPTFQPYEIKV 678
           N P + PYEIKV
Sbjct: 787 NTPIYVPYEIKV 798



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 89/222 (40%), Gaps = 37/222 (16%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELT------------G 261
           L   P IT+    +Y VD +  + + C   G P P  +W  N K                
Sbjct: 32  LPQPPTITKQSVKDYIVDPRDNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRS 91

Query: 262 GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP------- 314
           G   I   G  +  D      GEY CFARN  GTA     L+ K H  ++  P       
Sbjct: 92  GTLVIDFHGGGRPDDY----EGEYQCFARNDYGTA-----LSSKIHLQVSRSPLWPKEKV 142

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS-EPIDFESEPRFVQSND--YSLTVTKS 371
           +  EV+ G   + +CN        + I W+  S EPI  +      Q+ D  +S  + + 
Sbjct: 143 DVIEVDEGAPLSLQCNPPPGLPPPV-IFWMSSSMEPIHQDKRVSQGQNGDLYFSNVMLQD 201

Query: 372 SELDSGQYTCRAQTELDF-IEAQATLTVQVPLEAPSNFTLIQ 412
           ++ D   Y+C A+      I+ +   T++V  + P N T ++
Sbjct: 202 AQTD---YSCNARFHFTHTIQQKNPYTLKVKTKKPHNETSLR 240



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 124/319 (38%), Gaps = 59/319 (18%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSDT--GNY 195
           + +  EC+A G P P   W  NGK   +++ P  + RR+ G   I      + D   G Y
Sbjct: 52  DNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHGGGRPDDYEGEY 111

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNW-- 252
            C A N  G          ++ +P   +   D   VD G  + L C       P V +  
Sbjct: 112 QCFARNDYGTALSSKIHLQVSRSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPPPVIFWM 171

Query: 253 ------IHNQKELTGGRYTILETGDLKITDVAFADSG-EYTCFARN-------------- 291
                 IH  K ++ G     + GDL  ++V   D+  +Y+C AR               
Sbjct: 172 SSSMEPIHQDKRVSQG-----QNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTL 226

Query: 292 KLGTAQGSGSLTVKEHTH------ITDQPEDYEVEAGQSAT----------FRCNAVSDP 335
           K+ T +     +++ HT       +T+    +    G S++            C A   P
Sbjct: 227 KVKTKKPHNETSLRNHTDMYSARGVTETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVP 286

Query: 336 SLKLSIVWL-RGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +    I+W  +G E     +    +++ + +L ++  SE DSG+Y C A  ++  I    
Sbjct: 287 A--PDIMWYKKGGE---LPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTI 341

Query: 395 TLTVQVP---LEAPSNFTL 410
           ++ V+     L+ P N  L
Sbjct: 342 SVRVKAAPYWLDEPQNLIL 360


>gi|334322024|ref|XP_001371400.2| PREDICTED: neurofascin-like [Monodelphis domestica]
          Length = 1188

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 194/373 (52%), Gaps = 10/373 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + P+ ++   N+ K+L I +V   D
Sbjct: 262 TSSSQMVLRGMDLLLECIASGVPAPDIAWYKKGGDL-PAGKVKFENFNKALRITNVSEED 320

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 321 SGEYFCLASNRMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 379

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG P+  APPNP R+V  + I   + +   +  Y CNA+N  GY+  + +V+VL   
Sbjct: 380 WLVNGDPLEAAPPNPSREVAGDTIIFRDTQIGSSAVYQCNASNDHGYLLANAFVSVLDVP 439

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L++
Sbjct: 440 PRML-SPRNQLIKVIHYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYQVHENGSLEM 498

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
                 D G YTC A N LG A+    L VK+ T IT  PED  V+ G +    C    D
Sbjct: 499 AMARKEDQGIYTCVATNILGKAENQVRLEVKDPTRITRVPEDQVVKRGTNVVLECRVKHD 558

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           P+LKL++ WL+  EP+   +    ++  + SLT+   ++ D G YTC A TELD   A+A
Sbjct: 559 PTLKLTVNWLKDDEPLYIGNR---MKKEEDSLTIFGVADRDQGSYTCMASTELDRDIAKA 615

Query: 395 TLTVQVPLEAPSN 407
            LTV      P+N
Sbjct: 616 YLTVLAAQVVPTN 628



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 160/681 (23%), Positives = 254/681 (37%), Gaps = 90/681 (13%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCE----------- 105
           G P P   W    + PIN   R+SQG  G  L   +V   D +  Y+C            
Sbjct: 160 GLPSPVIFWMSSSMEPINQDKRVSQGQNG-DLYFSNVMLQDAKTDYSCNARFHFTHTIQQ 218

Query: 106 --------VSNGVGEAKSYSIDLSVLAA------------PYFTVEPEFINAAEEETVTF 145
                   ++N      S      + +A            P  T   + +    +  +  
Sbjct: 219 KNPFILKVLTNHAHNDSSLRNHTDMYSARGVAERTPSFMYPLGTSSSQMVLRGMD--LLL 276

Query: 146 ECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLG 204
           EC ASG+P P+I W   G  +   P    +    N+ + I N+ + D+G Y C A+N +G
Sbjct: 277 ECIASGVPAPDIAWYKKGGDL---PAGKVKFENFNKALRITNVSEEDSGEYFCLASNRMG 333

Query: 205 YVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-- 262
            +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N   L     
Sbjct: 334 SIRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWLVNGDPLEAAPP 392

Query: 263 RYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA 321
             +    GD  I  D     S  Y C A N  G    +  ++V +       P +  ++ 
Sbjct: 393 NPSREVAGDTIIFRDTQIGSSAVYQCNASNDHGYLLANAFVSVLDVPPRMLSPRNQLIKV 452

Query: 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTC 381
                 R +     S   ++ W +  +  + +     V  N  SL +  + + D G YTC
Sbjct: 453 IHYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYQVHENG-SLEMAMARKEDQGIYTC 511

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            A   L   E Q  L V+ P       T I  +   + V     V  +    H    K+ 
Sbjct: 512 VATNILGKAENQVRLEVKDP-------TRITRVPEDQVVKRGTNVVLECRVKHDPTLKLT 564

Query: 442 T-WTEKDGEGSIRELIVNKGESTT-----------------TEVDKFVPASKNFARVLAF 483
             W + D    I   +  + +S T                 TE+D+ +  +K +  VLA 
Sbjct: 565 VNWLKDDEPLYIGNRMKKEEDSLTIFGVADRDQGSYTCMASTELDRDI--AKAYLTVLA- 621

Query: 484 NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQS 543
             A   P + +     P+  P   + LE   L   +  L W+  +  N  +  Y I+++ 
Sbjct: 622 --AQVVPTNRMAPL--PKERPDPPRDLELTDLEERSVRLTWIPGDDNNSPITEYIIQFEE 677

Query: 544 VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYL 597
               +  P +    +   P + ++ +  L P   Y+  +      G    S      +  
Sbjct: 678 ---DQFQPGVWH-SHSKHPGSVNSAVLQLSPYVNYQFRVIAVNDVGSSHPSLPSERYRTS 733

Query: 598 FYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLD 657
              P  NP +V+G GS  NN+ I+WT M       P+ +Y + WRR    E+WN   V  
Sbjct: 734 GAPPESNPGDVKGAGSRKNNMEITWTPMNATSAFGPNLRYIVKWRRREGRESWNNATV-- 791

Query: 658 WRQSELVLANQPTFQPYEIKV 678
           W  S   +   P + PYEI+V
Sbjct: 792 W-GSRYTVVQTPVYVPYEIRV 811



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 17/225 (7%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP++   ++V+++    + WN V P +++
Sbjct: 807  YEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVK-VRVLNSTAIGLQWNRVYPDTVQ 865

Query: 433  GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  R Y+   W +      +     R+      +     V    P S     ++  NG  
Sbjct: 866  GQLREYRAYYWRDSSLLKGLWVSQKRQFASFSSDRIRGVVSSLFPYSNYKLEMVVVNGRG 925

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP SE+  F TPEGVP   +             L+W  PE PNG+L GY +KY +  GT
Sbjct: 926  DGPRSEVKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILTGYNLKYLAFNGT 985

Query: 548  KVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            K G  L+E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 986  KTGKALIETF----SPNQTKFSIQRADPVSRYRFSLSARTQVGSG 1026



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 30/190 (15%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L+  P IT+     Y VD +  +++ C   G P P   W  N +        R ++L   
Sbjct: 30  LSQPPTITKQSVKNYIVDPRDNILIECEAKGNPTPSFQWTRNSRFFNVAKDPRVSMLRRS 89

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 90  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIFLQVSKSPLWPKENLDPVV 144

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSND--YSLTVTKSSEL 374
           V+ G   T +CN    P L   ++ W+  S EPI+ +      Q+ D  +S  + + ++ 
Sbjct: 145 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPINQDKRVSQGQNGDLYFSNVMLQDAKT 202

Query: 375 DSGQYTCRAQ 384
           D   Y+C A+
Sbjct: 203 D---YSCNAR 209



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 69/314 (21%), Positives = 120/314 (38%), Gaps = 49/314 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPPNPR----RKVGPNRITIENLRKSD--TGN 194
           + +  EC+A G P P   W  N +  + A  +PR    R+ G   I   +  + +   G 
Sbjct: 50  DNILIECEAKGNPTPSFQWTRNSRFFNVA-KDPRVSMLRRSGTLVIDFRSGGRPEEYEGE 108

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNW 252
           Y C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W
Sbjct: 109 YQCFARNKFGTALSNRIFLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFW 168

Query: 253 IHNQKELTG--GRYTILETGDLKITDVAFADSG-EYTCFARN--------------KLGT 295
           + +  E      R +  + GDL  ++V   D+  +Y+C AR               K+ T
Sbjct: 169 MSSSMEPINQDKRVSQGQNGDLYFSNVMLQDAKTDYSCNARFHFTHTIQQKNPFILKVLT 228

Query: 296 AQGSGSLTVKEHTH------ITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKL 339
                  +++ HT       + ++   +    G S++            C A   P+   
Sbjct: 229 NHAHNDSSLRNHTDMYSARGVAERTPSFMYPLGTSSSQMVLRGMDLLLECIASGVPA--P 286

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            I W +     D  +     ++ + +L +T  SE DSG+Y C A   +  I    ++ V+
Sbjct: 287 DIAWYKKGG--DLPAGKVKFENFNKALRITNVSEEDSGEYFCLASNRMGSIRHTISVRVK 344

Query: 400 VP---LEAPSNFTL 410
                L+ P N  L
Sbjct: 345 AAPYWLDEPKNLIL 358


>gi|426227607|ref|XP_004007909.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Ovis aries]
          Length = 1192

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 141/393 (35%), Positives = 201/393 (51%), Gaps = 19/393 (4%)

Query: 24  ISASQNRHAPK-----QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DG-VPINP 76
           ISA  +R  P          +RK+E  LR   + L CI  G P P   W K DG +PIN 
Sbjct: 239 ISAKSHRQRPPTFLTPDGNTSRKEE--LRGNVLSLECIAEGLPTPIIYWIKEDGTLPIN- 295

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFIN 136
             R    N+ K+L I  V  +D G+Y C   N +G A  ++I ++V AAPY+ + P+ + 
Sbjct: 296 --RTFYRNFKKTLQIVQVTEADSGNYQCIAKNSLG-AIHHTISVTVKAAPYWIIAPQNLV 352

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
            + EE  T  C+A+G P+P I W+ NG PI  AP +P RK+  + I    +++  +  Y 
Sbjct: 353 LSPEEDGTLICRANGNPKPRISWLSNGVPIEIAPDDPSRKIDGDTIIFSKVQERSSAVYQ 412

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHN 255
           CNA+N  GY+  + +VNVLA  P I  +    Y V   +  +L C  FG+P P + W  +
Sbjct: 413 CNASNEYGYLLANAFVNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPLPAIEWFKD 472

Query: 256 QK--ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
            K   L    Y + E G L+I       +G YTC ARNKLG A+    L +K+ T I  Q
Sbjct: 473 AKGSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDPTRIIKQ 532

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           PE   V+ G + +F C    D +L  ++ WL+     +  S+ RF    DY L V   ++
Sbjct: 533 PEYAVVQRGSTVSFECKVKHDHTLIPTVTWLKDHG--ELPSDGRFTVDKDY-LVVADVND 589

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPS 406
            D G YTC A T LD + A A L+V  P   P+
Sbjct: 590 DDGGTYTCVANTTLDNVSASAVLSVVAPTPTPA 622



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 156/638 (24%), Positives = 259/638 (40%), Gaps = 62/638 (9%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTC--EVSNGVGEAKSYSIDLSVLAA------PYF 128
           S+R+SQG  G       +    +  Y C    ++     +   I + V++A      P  
Sbjct: 191 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISAKSHRQRPPT 250

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGK--PISQAPPNPRRKVGPNRI 182
            + P+   + +EE     ++ EC A GLP P I+W+      PI++      +K     +
Sbjct: 251 FLTPDGNTSRKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKKT----L 306

Query: 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRV 242
            I  + ++D+GNY C A NSLG ++  + V V A AP    AP++      +   L CR 
Sbjct: 307 QIVQVTEADSGNYQCIAKNSLGAIHHTISVTVKA-APYWIIAPQNLVLSPEEDGTLICRA 365

Query: 243 FGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGS 299
            G PKP ++W+ N    E+     +    GD  I + V    S  Y C A N+ G    +
Sbjct: 366 NGNPKPRISWLSNGVPIEIAPDDPSRKIDGDTIIFSKVQERSSAVYQCNASNEYGYLLAN 425

Query: 300 GSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             + V       +T     Y+V A + A   C     P    +I W + ++      E  
Sbjct: 426 AFVNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSP--LPAIEWFKDAKGSALR-EDI 482

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVI 414
           +V   + +L +  + +  +G YTC A+ +L   +    L ++ P   ++ P  + ++Q  
Sbjct: 483 YVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDPTRIIKQPE-YAVVQ-- 539

Query: 415 DAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE-GSIRELIVNKGESTTTEVDKFVPA 473
             + + VS+       ++         TW +  GE  S     V+K      +V+     
Sbjct: 540 --RGSTVSFE----CKVKHDHTLIPTVTWLKDHGELPSDGRFTVDKDYLVVADVND---D 590

Query: 474 SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVK 526
                  +A     N   S ++S V P   P  +  +   P           +  L W  
Sbjct: 591 DGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNPPFDLELTDQLDRSVQLSWTP 650

Query: 527 PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYT 586
            +  N  +  + I+Y+        P L         T T+A+L  L P   Y   +    
Sbjct: 651 GDDNNSPITKFIIEYEDAMHE---PGLWHHQAEVPGTQTTAQLK-LSPYVNYSFRVMAEN 706

Query: 587 KAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
             G      A  +YL     P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ 
Sbjct: 707 NLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVS 766

Query: 641 WRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 767 WRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 802



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 825  LPMVAPGNVH-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRNRRHIEKK 883

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 884  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDKVFNTPEGVPSAPSSLKIVN 943

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 944  PTLDSLTLEWEPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWILKNL 999

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1000 NISTRYKFYFYAQTAAGSGSQ 1020



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 146/608 (24%), Positives = 227/608 (37%), Gaps = 67/608 (11%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I   V+      Y C  S
Sbjct: 361 LICRANGNPKPRISWLSNGVPIEIAPDDPSRKID----GDTIIFSKVQERSSAVYQCNAS 416

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T                +C   G P P I W  + K 
Sbjct: 417 NEYGYLLANAF-VNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPLPAIEWFKDAK- 474

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    DV++ +      I + 
Sbjct: 475 -GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPTRIIKQ 532

Query: 225 PKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P+      G TV   C+V       P V W+ +  EL + GR+T+ +   L + DV   D
Sbjct: 533 PEYAVVQRGSTVSFECKVKHDHTLIPTVTWLKDHGELPSDGRFTV-DKDYLVVADVNDDD 591

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G YTC A   L     S  L+V     +   P    +    +  F           + +
Sbjct: 592 GGTYTCVANTTLDNVSASAVLSV-----VAPTPTPAPIYDVPNPPFDLELTDQLDRSVQL 646

Query: 342 VWLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQA 394
            W  G +   PI     E E    +   +           + Q          F + A+ 
Sbjct: 647 SWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQAEVPGTQTTAQLKLSPYVNYSFRVMAEN 706

Query: 395 TLTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQ 441
            L   +P EA   +           T ++ + ++    V++W P++     G    YKV 
Sbjct: 707 NLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV- 765

Query: 442 TWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFV- 498
           +W +KDG+     ++V N  +   +    FVP      +V A N A   P P+ ++    
Sbjct: 766 SWRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDAGFAPEPAAVMGHSG 822

Query: 499 --TPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKG--TKVGPL 552
              P   PG V       + S+   + W  V  +   G L GY+I Y   +   T+    
Sbjct: 823 EDLPMVAPGNVH---VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRNRRH 879

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRG 612
           +E+       + T   L GLEP + Y +++      G+G  S      P K  +  EG  
Sbjct: 880 IEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPAS------PDKVFNTPEGVP 933

Query: 613 STPNNLVI 620
           S P++L I
Sbjct: 934 SAPSSLKI 941



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 128/297 (43%), Gaps = 32/297 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   +TI  +   K++T  G Y
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGSGTLTINIMSEGKAETYEGVY 121

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVN-WI 253
            C A N  G    +  V   + +P  T+   +  T+ +G+++VL CR      P +  W+
Sbjct: 122 QCTARNERGAAISNNIVIRPSRSPLWTKEKLEPITLRNGQSLVLPCRPPIGLPPPIIFWM 181

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK---E 306
            N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK    
Sbjct: 182 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISA 241

Query: 307 HTHITDQPEDYEVEAGQSAT---FRCNAVSDPSLKLS-----IVWLR--GSEPIDFESEP 356
            +H   +P  +    G ++     R N +S   +        I W++  G+ PI+     
Sbjct: 242 KSH-RQRPPTFLTPDGNTSRKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINR---- 296

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
            F ++   +L + + +E DSG Y C A+  L  I    ++TV+     + AP N  L
Sbjct: 297 TFYRNFKKTLQIVQVTEADSGNYQCIAKNSLGAIHHTISVTVKAAPYWIIAPQNLVL 353


>gi|345801458|ref|XP_547004.3| PREDICTED: protein sidekick-1 [Canis lupus familiaris]
          Length = 2114

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 190/630 (30%), Positives = 281/630 (44%), Gaps = 54/630 (8%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
           + V   + ++ L CI    P+ +    W ++GV      RIS G  ++G+ L I +   +
Sbjct: 206 RSVVAGSSEITLECIANARPIQELHVNWKRNGV------RISGGLHSFGRHLTISNPTSA 259

Query: 98  DQGSYTCE--VSNGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPE 154
           D G Y CE  +S    +A +    LS++  PYFT EPE  I    EETV   C+A G+P 
Sbjct: 260 DTGLYVCEATLSGSTFDAATAKAFLSIIEPPYFTAEPESRILVEVEETVDIVCRAMGVPL 319

Query: 155 PEIHWVHNGKPISQAPPNPRRK-VGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P + W  +   IS+   NPR K +    + I+ LR  D+G + C A+N  G +    Y++
Sbjct: 320 PTLQWYKDAISISKLQ-NPRYKMLSSGGLRIQKLRPEDSGIFQCFASNEGGEIQTYTYLD 378

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V   AP  T+ P D    DG T  L C V GAPKP + W   +  L  G     R+ +LE
Sbjct: 379 VTNVAPAFTQLPVDTTVTDGMTATLRCEVSGAPKPAITWRRGKHILASGSVRIPRFMLLE 438

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L+I  V+  D+G YTC+A N  G+   S +LTV   T I + PED  V  G +AT R
Sbjct: 439 SGGLQIAPVSIQDAGNYTCYAANMEGSLNASAALTVWNRTFIINPPEDRVVIKGTTATLR 498

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A  DP + L  VW + +  I   S  R V   D SL ++++   D G YTC   +E  
Sbjct: 499 CGATHDPRITLRYVWKKDNTVITPSSSSRIVVEKDGSLLISQTWSGDIGDYTCEIISEGG 558

Query: 389 FIEAQATLTVQVPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRGHFRG-----YKVQT 442
                A L V     +P N    +    +   ++SW  V P      F G     Y +  
Sbjct: 559 NDSRTARLEVIELPHSPQNLLATLNSSHSHTVMLSW--VRP------FDGNSPVLYYIVE 610

Query: 443 WTEKDGEGSIRELIVNKG-ESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISF 497
            +E +    +   + N G E T   V    PA     RV A N    G Y+   S ++  
Sbjct: 611 LSENNSPWKVH--LSNVGPEMTGITVRGLTPARTYQFRVCAVNQVGRGQYSAETSRLMLP 668

Query: 498 VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLER 555
             P   P   +++ A    + +  ++W  P +   NGVL GY ++Y+ + G    P   +
Sbjct: 669 EEPPSAPP--KNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYR-LAGL---PGEHQ 722

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEG 610
              I+ P      +  L   T+Y I +A Y  AG G  S+      L  VP   P NV+ 
Sbjct: 723 QRNITSPEVNYCLVTELIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQM 782

Query: 611 RGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
                  +   W   P+   N  +  Y++ 
Sbjct: 783 EAVNSTTIQFLWNPPPQQFINGINQGYKLL 812



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 174/655 (26%), Positives = 256/655 (39%), Gaps = 95/655 (14%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           ++K V+  +  V         P PQ  W ++G  I PS RI+       L+I      D 
Sbjct: 102 QRKTVSQGHAAVLNLLPITSCPRPQVTWFREGHKIIPSHRIAI-TLENQLVILATTAGDT 160

Query: 100 GSYTCEVSNGV-GEAK-SYSIDLSV--------LAAPYFTVEP--EFINAAEEETVTFEC 147
           G+Y  +  N   GE K S  I LS+          AP   V P    + A   E +T EC
Sbjct: 161 GAYYAQAVNERNGENKTSPLIHLSIARDVGTPETMAPVIVVPPGNRSVVAGSSE-ITLEC 219

Query: 148 KASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT---NS 202
            A+  P  E+H  W  NG  IS    +  R      +TI N   +DTG Y C AT   ++
Sbjct: 220 IANARPIQELHVNWKRNGVRISGGLHSFGR-----HLTISNPTSADTGLYVCEATLSGST 274

Query: 203 LGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KE 258
                   +++++   P  T  P+    V+  +TV + CR  G P P + W  +     +
Sbjct: 275 FDAATAKAFLSII-EPPYFTAEPESRILVEVEETVDIVCRAMGVPLPTLQWYKDAISISK 333

Query: 259 LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPEDY 317
           L   RY +L +G L+I  +   DSG + CFA N+ G  Q    L V       T  P D 
Sbjct: 334 LQNPRYKMLSSGGLRIQKLRPEDSGIFQCFASNEGGEIQTYTYLDVTNVAPAFTQLPVDT 393

Query: 318 EVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELD 375
            V  G +AT RC     P  K +I W RG   +   S   PRF+      L +   S  D
Sbjct: 394 TVTDGMTATLRCEVSGAP--KPAITWRRGKHILASGSVRIPRFMLLESGGLQIAPVSIQD 451

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
           +G YTC A      + A A LTV        N T I      + V+     + +    H 
Sbjct: 452 AGNYTCYAANMEGSLNASAALTVW-------NRTFIINPPEDRVVIKGTTATLRCGATHD 504

Query: 436 RGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
               ++   +KD        ++    S+   V+K      +      ++G       EII
Sbjct: 505 PRITLRYVWKKDNT------VITPSSSSRIVVEK----DGSLLISQTWSGDIGDYTCEII 554

Query: 496 SFVTPEG-------------VPGTVQSLEAIPLGSS---AFYLKWVKPEQPNGVLMGYKI 539
           S    EG             +P + Q+L A  L SS      L WV+P   N  ++ Y +
Sbjct: 555 S----EGGNDSRTARLEVIELPHSPQNLLAT-LNSSHSHTVMLSWVRPFDGNSPVLYYIV 609

Query: 540 KYQ------SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-- 591
           +         V  + VGP +           T   + GL P+  Y+  +    + G G  
Sbjct: 610 ELSENNSPWKVHLSNVGPEM-----------TGITVRGLTPARTYQFRVCAVNQVGRGQY 658

Query: 592 -AESKYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
            AE+  L      P   P N+   G T  ++++ W   PE EHN     Y + +R
Sbjct: 659 SAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYR 713



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 104/242 (42%), Gaps = 27/242 (11%)

Query: 389 FIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
           F  A    T+Q VP   P N  + + +++      WNP   Q + G  +GYK+  W  + 
Sbjct: 760 FSRAVTEYTLQGVPTAPPQNVQM-EAVNSTTIQFLWNPPPQQFINGINQGYKLLAWPAEV 818

Query: 448 GEGSIRELI------VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
            E +    I      V+ G    T + KF   +  FA VL F    +GPPS      T E
Sbjct: 819 PEATTVVTIAPDFHGVHHG--YITNLKKF---TAYFASVLCFTTPGDGPPSTPQLIWTHE 873

Query: 502 GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
             PG V  L    +  ++  + W +P + NG++ GY++ ++ V G        RL +   
Sbjct: 874 DKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQVSWE-VYGRNGS----RLTHTLS 928

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY--VPFKNPDNVEGRGSTPNNLV 619
            TT   K+ GL   T Y I +A  T AG G  +       VP + P         P+NLV
Sbjct: 929 NTTHEYKIKGLSSLTTYTIDVAAVTTAGAGLATSSTISSGVPPELP-------GAPSNLV 981

Query: 620 IS 621
           IS
Sbjct: 982 IS 983



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 6/144 (4%)

Query: 401  PLEAPSNFTLIQV--IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVN 458
            P  AP N   IQV  + A +  V+W+P  P+S  G+ +GYKV  W E + +    ++ V 
Sbjct: 1605 PAMAPQN---IQVTPLTASQLEVTWDPPPPESQNGNIQGYKVYYW-EAESQNETEKMKVL 1660

Query: 459  KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSS 518
                T  ++      ++    + AFN A +GP S+     T +  PGT   L    + S+
Sbjct: 1661 FLPETMVKLKNLTSHTQYLVSISAFNAAGDGPQSDPRQGRTHQAAPGTPSFLAFSEITST 1720

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQ 542
               + W +P   NGVL GY++ Y+
Sbjct: 1721 TLNVSWGEPAAANGVLQGYRVVYE 1744



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 94/234 (40%), Gaps = 33/234 (14%)

Query: 388  DF-IEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE 445
            DF  E  A  T+Q VP E PS F  +        ++ W P   +SL G  +GY++  + E
Sbjct: 1467 DFSAETDAVTTLQDVPGEPPS-FISVTPHTTSSVLIQWRPPRDESLNGLLQGYRIY-YRE 1524

Query: 446  KDGEGSIREL---------------------IVNKGESTTTEVDKFVPASKNFARVL-AF 483
             + E S   +                      VN   + TT     +   + +  +L A+
Sbjct: 1525 LESEASAATVSKTLKTPSALRAELTAQSSFKTVNSSSTLTTYELTHLKKYRRYEVILTAY 1584

Query: 484  NGAYNGPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIK 540
            N     P S  +     E  P    Q+++  PL +S   + W    PE  NG + GYK+ 
Sbjct: 1585 NIIGESPASAPVEVFVGEAAPAMAPQNIQVTPLTASQLEVTWDPPPPESQNGNIQGYKVY 1644

Query: 541  YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y   +        E++  +  P T   KL  L   T+Y + ++ +  AGDG +S
Sbjct: 1645 YWEAESQNE---TEKMKVLFLPETM-VKLKNLTSHTQYLVSISAFNAAGDGPQS 1694



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 21/200 (10%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V  Q   G   GYKV  +  KD +   R  +V  
Sbjct: 1179 VPSAAPENVS-AEAVSSTQILLTWASVPEQDQNGLILGYKV-LFRAKDLDPEPRSHVVRG 1236

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNG-PPSEIISFVTPEGVPGTVQSLEAIPLGSS 518
              S +  +           +VLAF    NG P S +I   T +  PG    L    +  +
Sbjct: 1237 NHSQSALLAGLRKFVLYELQVLAFTRIGNGVPSSPLILERTKDDAPGPPVRLVFPEVRLT 1296

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGT-------KVGPLLERLPYISDPTTTSAKLAG 571
            +  + W  PE+PNG+++GY+I Y+    +       +VG  + +         T+ +LA 
Sbjct: 1297 SVRIVWQPPEEPNGIILGYQIAYRLASSSPNTFTTVEVGATVRQF--------TATELA- 1347

Query: 572  LEPSTKYRIHLAGYTKAGDG 591
              P + Y   L+  T+ G G
Sbjct: 1348 --PESAYVFRLSAKTRQGWG 1365



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 91/207 (43%), Gaps = 10/207 (4%)

Query: 397  TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIRE 454
            T+Q P +       ++        + W P+      G+    GY+++ W       S+ +
Sbjct: 1072 TLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRPDLQAPSLTQ 1131

Query: 455  LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEAI 513
            +I ++ E   T ++     ++   ++ AFN    GP S  +   T E VP    +++ A 
Sbjct: 1132 VINDRLEREFT-IEGLEEWTEYELQMQAFNAIGAGPWSVAVRGRTRESVPSAAPENVSAE 1190

Query: 514  PLGSSAFYLKWVK-PEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAG 571
             + S+   L W   PEQ  NG+++GYK+ +++ K     P   R   +    + SA LAG
Sbjct: 1191 AVSSTQILLTWASVPEQDQNGLILGYKVLFRA-KDLDPEP---RSHVVRGNHSQSALLAG 1246

Query: 572  LEPSTKYRIHLAGYTKAGDGAESKYLF 598
            L     Y + +  +T+ G+G  S  L 
Sbjct: 1247 LRKFVLYELQVLAFTRIGNGVPSSPLI 1273



 Score = 47.4 bits (111), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 110/286 (38%), Gaps = 44/286 (15%)

Query: 426  VSPQSLRGHFR-GYKVQTWTEKDGEGSIRELIV--------------------NKGESTT 464
            +SP+S    FR GY        DG+ SI   IV                    N+ ++ T
Sbjct: 985  ISPRSATLQFRPGY--------DGKTSISRWIVEGQVGAIGDEEEWVSLYEEENEPDAQT 1036

Query: 465  TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ--SLEAIPLGSSAFYL 522
             E+    P +    R+   N   + P S+    +     P  V   S+       ++  L
Sbjct: 1037 LEIPNLTPYTHYRFRMRQVNIVGSSPVSQSSRVIQTLQAPPDVAPTSVTVRTASETSLRL 1096

Query: 523  KWVK--PEQPNG--VLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +WV     Q NG    +GY+IKY   +     P L ++  I+D       + GLE  T+Y
Sbjct: 1097 RWVPLPDSQYNGNPESVGYRIKYW--RPDLQAPSLTQV--INDRLEREFTIEGLEEWTEY 1152

Query: 579  RIHLAGYTKAGDGAES-----KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAP 633
             + +  +   G G  S     +    VP   P+NV     +   ++++W ++PE + N  
Sbjct: 1153 ELQMQAFNAIGAGPWSVAVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGL 1212

Query: 634  HFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVV 679
               Y++ +R  +         V        +LA    F  YE++V+
Sbjct: 1213 ILGYKVLFRAKDLDPEPRSHVVRGNHSQSALLAGLRKFVLYELQVL 1258



 Score = 46.6 bits (109), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 65/166 (39%), Gaps = 8/166 (4%)

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
           TE    +  ++G  +VLTC   G+   E  W+HN  ELT    T        I  +   D
Sbjct: 12  TEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMHNDSELT----TYTSEYKYIIPSLQRLD 67

Query: 282 SGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           +G Y C  RN++G   Q    + V    +  D  +   V  G +A      ++    +  
Sbjct: 68  AGFYRCVVRNRMGALLQRRSEVQVAYMGNFMDTDQRKTVSQGHAAVLNLLPITS-CPRPQ 126

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + W R    I      R   + +  L +  ++  D+G Y  +A  E
Sbjct: 127 VTWFREGHKII--PSHRIAITLENQLVILATTAGDTGAYYAQAVNE 170


>gi|426227603|ref|XP_004007907.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Ovis aries]
          Length = 1183

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 140/392 (35%), Positives = 202/392 (51%), Gaps = 15/392 (3%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEF 96
           +RK+E  LR   + L CI  G P P   W K DG +PIN   R    N+ K+L I  V  
Sbjct: 272 SRKEE--LRGNVLSLECIAEGLPTPIIYWIKEDGTLPIN---RTFYRNFKKTLQIVQVTE 326

Query: 97  SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           +D G+Y C   N +G A  ++I ++V AAPY+ + P+ +  + EE  T  C+A+G P+P 
Sbjct: 327 ADSGNYQCIAKNSLG-AIHHTISVTVKAAPYWIIAPQNLVLSPEEDGTLICRANGNPKPR 385

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           I W+ NG PI  AP +P RK+  + I    +++  +  Y CNA+N  GY+  + +VNVLA
Sbjct: 386 ISWLSNGVPIEIAPDDPSRKIDGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLA 445

Query: 217 HAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLK 273
             P I  +    Y V   +  +L C  FG+P P + W  + K   L    Y + E G L+
Sbjct: 446 EPPRILTSANTLYQVIANRPALLDCAFFGSPLPAIEWFKDAKGSALREDIYVLHENGTLE 505

Query: 274 ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVS 333
           I       +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G + +F C    
Sbjct: 506 IPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDPTRIIKQPEYAVVQRGSTVSFECKVKH 565

Query: 334 DPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393
           D +L  ++ WL+     +  S+ RF    DY L V   ++ D G YTC A T LD + A 
Sbjct: 566 DHTLIPTVTWLKDHG--ELPSDGRFTVDKDY-LVVADVNDDDGGTYTCVANTTLDNVSAS 622

Query: 394 ATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           A L+V      P +  L   +D +   +SW P
Sbjct: 623 AVLSVVDVPNPPFDLELTDQLD-RSVQLSWTP 653



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 142/553 (25%), Positives = 229/553 (41%), Gaps = 46/553 (8%)

Query: 143 VTFECKASGLPEPEIHWVHNGK--PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
           ++ EC A GLP P I+W+      PI++      +K     + I  + ++D+GNY C A 
Sbjct: 282 LSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKKT----LQIVQVTEADSGNYQCIAK 337

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK--E 258
           NSLG ++  + V V A AP    AP++      +   L CR  G PKP ++W+ N    E
Sbjct: 338 NSLGAIHHTISVTVKA-APYWIIAPQNLVLSPEEDGTLICRANGNPKPRISWLSNGVPIE 396

Query: 259 LTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPE 315
           +     +    GD  I + V    S  Y C A N+ G    +  + V       +T    
Sbjct: 397 IAPDDPSRKIDGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTSANT 456

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
            Y+V A + A   C     P    +I W + ++      E  +V   + +L +  + +  
Sbjct: 457 LYQVIANRPALLDCAFFGSP--LPAIEWFKDAKGSALR-EDIYVLHENGTLEIPVAQKDS 513

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           +G YTC A+ +L   +    L ++ P   ++ P  + ++Q    + + VS+       ++
Sbjct: 514 TGTYTCVARNKLGMAKNDVHLEIKDPTRIIKQPE-YAVVQ----RGSTVSFE----CKVK 564

Query: 433 GHFRGYKVQTWTEKDGE-GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                    TW +  GE  S     V+K      +V+            +A     N   
Sbjct: 565 HDHTLIPTVTWLKDHGELPSDGRFTVDKDYLVVADVND---DDGGTYTCVANTTLDNVSA 621

Query: 492 SEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP 551
           S ++S V    VP     LE       +  L W   +  N  +  + I+Y+        P
Sbjct: 622 SAVLSVV---DVPNPPFDLELTDQLDRSVQLSWTPGDDNNSPITKFIIEYEDAMHE---P 675

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV--PFKNP 605
            L         T T+A+L  L P   Y   +      G      A  +YL     P KNP
Sbjct: 676 GLWHHQAEVPGTQTTAQLK-LSPYVNYSFRVMAENNLGRSLPSEASEQYLTKAAEPDKNP 734

Query: 606 DNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVL 665
             VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W    V+    S+ ++
Sbjct: 735 TAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS--VVVANVSKYIV 792

Query: 666 ANQPTFQPYEIKV 678
           +  PTF PY IKV
Sbjct: 793 SGTPTFVPYLIKV 805



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 828  LPMVAPGNVH-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRNRRHIEKK 886

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 887  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDKVFNTPEGVPSAPSSLKIVN 946

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 947  PTLDSLTLEWEPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIP----ANKTRWILKNL 1002

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1003 NISTRYKFYFYAQTAAGSGSQ 1023



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 151/608 (24%), Positives = 233/608 (38%), Gaps = 77/608 (12%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I   V+      Y C  S
Sbjct: 374 LICRANGNPKPRISWLSNGVPIEIAPDDPSRKID----GDTIIFSKVQERSSAVYQCNAS 429

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T                +C   G P P I W  + K 
Sbjct: 430 NEYGYLLANAF-VNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPLPAIEWFKDAK- 487

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    DV++ +      I + 
Sbjct: 488 -GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPTRIIKQ 545

Query: 225 PKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P+      G TV   C+V       P V W+ +  EL + GR+T+ +   L + DV   D
Sbjct: 546 PEYAVVQRGSTVSFECKVKHDHTLIPTVTWLKDHGELPSDGRFTV-DKDYLVVADVNDDD 604

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G YTC A   L     S  L+V +   + + P D E+              D S++LS 
Sbjct: 605 GGTYTCVANTTLDNVSASAVLSVVD---VPNPPFDLELTDQL----------DRSVQLS- 650

Query: 342 VWLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQA 394
            W  G +   PI     E E    +   +           + Q          F + A+ 
Sbjct: 651 -WTPGDDNNSPITKFIIEYEDAMHEPGLWHHQAEVPGTQTTAQLKLSPYVNYSFRVMAEN 709

Query: 395 TLTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQ 441
            L   +P EA   +           T ++ + ++    V++W P++     G    YKV 
Sbjct: 710 NLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV- 768

Query: 442 TWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFV- 498
           +W +KDG+     ++V N  +   +    FVP      +V A N A   P P+ ++    
Sbjct: 769 SWRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDAGFAPEPAAVMGHSG 825

Query: 499 --TPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKG--TKVGPL 552
              P   PG V       + S+   + W  V  +   G L GY+I Y   +   T+    
Sbjct: 826 EDLPMVAPGNVH---VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRNRRH 882

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRG 612
           +E+       + T   L GLEP + Y +++      G+G  S      P K  +  EG  
Sbjct: 883 IEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPAS------PDKVFNTPEGVP 936

Query: 613 STPNNLVI 620
           S P++L I
Sbjct: 937 SAPSSLKI 944



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 132/344 (38%), Gaps = 57/344 (16%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNGKPIS-QAP 170
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  ISALEVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKD 86

Query: 171 PNPRRKVGPNRITIENLR--KSDT--GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
           P    K G   +TI  +   K++T  G Y C A N  G    +  V   + +P  T+   
Sbjct: 87  PLVTMKPGSGTLTINIMSEGKAETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKL 146

Query: 227 DEYTV-DGKTVVLTCRVFGAPKPEVN-WIHN--QKELTGGRYTILETGDLKITDVAFADS 282
           +  T+ +G+++VL CR      P +  W+ N  Q+     R +    GDL  ++V   D+
Sbjct: 147 EPITLRNGQSLVLPCRPPIGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDT 206

Query: 283 GE-YTCFAR-NKLGTAQGSGSLTVKE------HTHITDQPEDYEVEAGQSATFRCNAVSD 334
            E Y C+AR N   T Q    ++VK       +  I     D E    +S   R      
Sbjct: 207 REDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFYGAKSHRQRPPTFLT 266

Query: 335 PSLKLS-----------------------IVWLR--GSEPIDFESEPRFVQSNDYSLTVT 369
           P    S                       I W++  G+ PI+      F ++   +L + 
Sbjct: 267 PDGNTSRKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINR----TFYRNFKKTLQIV 322

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
           + +E DSG Y C A+  L  I    ++TV+     + AP N  L
Sbjct: 323 QVTEADSGNYQCIAKNSLGAIHHTISVTVKAAPYWIIAPQNLVL 366


>gi|426227601|ref|XP_004007906.1| PREDICTED: neuronal cell adhesion molecule isoform 1 [Ovis aries]
          Length = 1180

 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 141/393 (35%), Positives = 201/393 (51%), Gaps = 19/393 (4%)

Query: 24  ISASQNRHAPK-----QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DG-VPINP 76
           ISA  +R  P          +RK+E  LR   + L CI  G P P   W K DG +PIN 
Sbjct: 239 ISAKSHRQRPPTFLTPDGNTSRKEE--LRGNVLSLECIAEGLPTPIIYWIKEDGTLPIN- 295

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFIN 136
             R    N+ K+L I  V  +D G+Y C   N +G A  ++I ++V AAPY+ + P+ + 
Sbjct: 296 --RTFYRNFKKTLQIVQVTEADSGNYQCIAKNSLG-AIHHTISVTVKAAPYWIIAPQNLV 352

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
            + EE  T  C+A+G P+P I W+ NG PI  AP +P RK+  + I    +++  +  Y 
Sbjct: 353 LSPEEDGTLICRANGNPKPRISWLSNGVPIEIAPDDPSRKIDGDTIIFSKVQERSSAVYQ 412

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHN 255
           CNA+N  GY+  + +VNVLA  P I  +    Y V   +  +L C  FG+P P + W  +
Sbjct: 413 CNASNEYGYLLANAFVNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPLPAIEWFKD 472

Query: 256 QK--ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
            K   L    Y + E G L+I       +G YTC ARNKLG A+    L +K+ T I  Q
Sbjct: 473 AKGSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDPTRIIKQ 532

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           PE   V+ G + +F C    D +L  ++ WL+     +  S+ RF    DY L V   ++
Sbjct: 533 PEYAVVQRGSTVSFECKVKHDHTLIPTVTWLKDHG--ELPSDGRFTVDKDY-LVVADVND 589

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPS 406
            D G YTC A T LD + A A L+V  P   P+
Sbjct: 590 DDGGTYTCVANTTLDNVSASAVLSVVAPTPTPA 622



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 156/638 (24%), Positives = 259/638 (40%), Gaps = 62/638 (9%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTC--EVSNGVGEAKSYSIDLSVLAA------PYF 128
           S+R+SQG  G       +    +  Y C    ++     +   I + V++A      P  
Sbjct: 191 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISAKSHRQRPPT 250

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGK--PISQAPPNPRRKVGPNRI 182
            + P+   + +EE     ++ EC A GLP P I+W+      PI++      +K     +
Sbjct: 251 FLTPDGNTSRKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKKT----L 306

Query: 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRV 242
            I  + ++D+GNY C A NSLG ++  + V V A AP    AP++      +   L CR 
Sbjct: 307 QIVQVTEADSGNYQCIAKNSLGAIHHTISVTVKA-APYWIIAPQNLVLSPEEDGTLICRA 365

Query: 243 FGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGS 299
            G PKP ++W+ N    E+     +    GD  I + V    S  Y C A N+ G    +
Sbjct: 366 NGNPKPRISWLSNGVPIEIAPDDPSRKIDGDTIIFSKVQERSSAVYQCNASNEYGYLLAN 425

Query: 300 GSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             + V       +T     Y+V A + A   C     P    +I W + ++      E  
Sbjct: 426 AFVNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSP--LPAIEWFKDAKGSALR-EDI 482

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVI 414
           +V   + +L +  + +  +G YTC A+ +L   +    L ++ P   ++ P  + ++Q  
Sbjct: 483 YVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDPTRIIKQPE-YAVVQ-- 539

Query: 415 DAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE-GSIRELIVNKGESTTTEVDKFVPA 473
             + + VS+       ++         TW +  GE  S     V+K      +V+     
Sbjct: 540 --RGSTVSFE----CKVKHDHTLIPTVTWLKDHGELPSDGRFTVDKDYLVVADVND---D 590

Query: 474 SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVK 526
                  +A     N   S ++S V P   P  +  +   P           +  L W  
Sbjct: 591 DGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNPPFDLELTDQLDRSVQLSWTP 650

Query: 527 PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYT 586
            +  N  +  + I+Y+        P L         T T+A+L  L P   Y   +    
Sbjct: 651 GDDNNSPITKFIIEYEDAMHE---PGLWHHQAEVPGTQTTAQLK-LSPYVNYSFRVMAEN 706

Query: 587 KAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
             G      A  +YL     P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ 
Sbjct: 707 NLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVS 766

Query: 641 WRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 767 WRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 802



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 825  LPMVAPGNVH-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRNRRHIEKK 883

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 884  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDKVFNTPEGVPSAPSSLKIVN 943

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 944  PTLDSLTLEWEPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWILKNL 999

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1000 NISTRYKFYFYAQTAAGSGSQ 1020



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 146/608 (24%), Positives = 227/608 (37%), Gaps = 67/608 (11%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I   V+      Y C  S
Sbjct: 361 LICRANGNPKPRISWLSNGVPIEIAPDDPSRKID----GDTIIFSKVQERSSAVYQCNAS 416

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T                +C   G P P I W  + K 
Sbjct: 417 NEYGYLLANAF-VNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPLPAIEWFKDAK- 474

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    DV++ +      I + 
Sbjct: 475 -GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPTRIIKQ 532

Query: 225 PKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P+      G TV   C+V       P V W+ +  EL + GR+T+ +   L + DV   D
Sbjct: 533 PEYAVVQRGSTVSFECKVKHDHTLIPTVTWLKDHGELPSDGRFTV-DKDYLVVADVNDDD 591

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G YTC A   L     S  L+V     +   P    +    +  F           + +
Sbjct: 592 GGTYTCVANTTLDNVSASAVLSV-----VAPTPTPAPIYDVPNPPFDLELTDQLDRSVQL 646

Query: 342 VWLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQA 394
            W  G +   PI     E E    +   +           + Q          F + A+ 
Sbjct: 647 SWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQAEVPGTQTTAQLKLSPYVNYSFRVMAEN 706

Query: 395 TLTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQ 441
            L   +P EA   +           T ++ + ++    V++W P++     G    YKV 
Sbjct: 707 NLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV- 765

Query: 442 TWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFV- 498
           +W +KDG+     ++V N  +   +    FVP      +V A N A   P P+ ++    
Sbjct: 766 SWRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDAGFAPEPAAVMGHSG 822

Query: 499 --TPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKG--TKVGPL 552
              P   PG V       + S+   + W  V  +   G L GY+I Y   +   T+    
Sbjct: 823 EDLPMVAPGNVH---VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRNRRH 879

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRG 612
           +E+       + T   L GLEP + Y +++      G+G  S      P K  +  EG  
Sbjct: 880 IEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPAS------PDKVFNTPEGVP 933

Query: 613 STPNNLVI 620
           S P++L I
Sbjct: 934 SAPSSLKI 941



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 123/296 (41%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   +TI  +   K++T  G Y
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGSGTLTINIMSEGKAETYEGVY 121

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVN-WI 253
            C A N  G    +  V   + +P  T+   +  T+ +G+++VL CR      P +  W+
Sbjct: 122 QCTARNERGAAISNNIVIRPSRSPLWTKEKLEPITLRNGQSLVLPCRPPIGLPPPIIFWM 181

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK---E 306
            N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK    
Sbjct: 182 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISA 241

Query: 307 HTHITDQP---------EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
            +H    P            E   G   +  C A   P+  +  +   G+ PI+      
Sbjct: 242 KSHRQRPPTFLTPDGNTSRKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINR----T 297

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
           F ++   +L + + +E DSG Y C A+  L  I    ++TV+     + AP N  L
Sbjct: 298 FYRNFKKTLQIVQVTEADSGNYQCIAKNSLGAIHHTISVTVKAAPYWIIAPQNLVL 353


>gi|194218739|ref|XP_001492769.2| PREDICTED: protein sidekick-1 [Equus caballus]
          Length = 2113

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 195/627 (31%), Positives = 275/627 (43%), Gaps = 48/627 (7%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
           + V   + +V L CI    P+      W ++GV      RI+ G  ++G+ L I +   S
Sbjct: 207 RSVVAGSSEVTLECIANARPVEDLSVSWKRNGV------RITSGLHSFGRHLTISNPTSS 260

Query: 98  DQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPE 154
           D G Y CE +      E       LS++  PYFT EPE  I    EETV   C+A G+P 
Sbjct: 261 DTGVYVCEATLRGSAFEPARAKAFLSIIEPPYFTAEPESRILVEVEETVDIVCQAMGVPL 320

Query: 155 PEIHWVHNGKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P + W  +   IS+   NPR KV     + I+ LR  D+G + C ATN  G +    Y++
Sbjct: 321 PTLQWYKDAISISKLQ-NPRYKVLSSGGLRIQKLRPEDSGIFQCFATNEGGEIQTHTYLD 379

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V   AP  T+ P D    DG T +L C V GAPKP + W      L  G     R+ +LE
Sbjct: 380 VTNVAPAFTQLPVDTTVTDGMTAILKCEVSGAPKPAIMWKRGNHILASGSVRIPRFMLLE 439

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L+IT V   D+G YTC+A N  G+   S +LTV   T I + PED  V  G +AT  
Sbjct: 440 SGGLQITPVFIQDAGNYTCYAANTEGSLNASAALTVWNRTSIINPPEDRVVIKGTTATLD 499

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A  DP + L  VW + +  I   S  R V   D SL ++++   D G YTC   +E  
Sbjct: 500 CGATHDPRISLRYVWKKDNVVITPSSSSRIVVEKDGSLLISQTWSGDIGDYTCEIISEGG 559

Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRG-----YKVQTW 443
                A L V     +P N  L  +  A    V  + V P      F G     Y +   
Sbjct: 560 NDSRMARLEVIELPHSPQNL-LASLNSAHSHTVMLSWVRP------FDGNSPVLYYIVEL 612

Query: 444 TEKDGEGSIRELIVNKG-ESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPE 501
           +E +    +   + N G E T   V    PA     RV A N    G  S E    + PE
Sbjct: 613 SENNSPWKVH--LSNVGPEMTGVAVRGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPE 670

Query: 502 GVPGT-VQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPY 558
             P    +++ A    + +  ++W  P +   NGVL GY ++Y+ + G   G   +R   
Sbjct: 671 EPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYR-LAGLP-GEYQQR--N 726

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEGRGS 613
           I+ P      +  L   T+Y I +A Y  AG G  S+      L  VP   P NV+    
Sbjct: 727 ITSPEVNYCLVTELIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQAEAV 786

Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIF 640
               +   W   P+   N  +  Y++ 
Sbjct: 787 NSTTIQFLWNPPPQQFINGINQGYKLL 813



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 172/688 (25%), Positives = 269/688 (39%), Gaps = 89/688 (12%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           ++K V+  +  +         P PQ  W ++G  I PS+RI+       L+I     SD 
Sbjct: 103 QRKTVSQGHAAILNLLPITSCPRPQVTWFREGHKIIPSNRIAI-TLENQLVILAAAASDS 161

Query: 100 GSYTCEVSNGV-GEAK-SYSIDLSV--------LAAPYFTVEP--EFINAAEEETVTFEC 147
           G Y  +  N   GE K S  I LSV          AP   + P    + A   E VT EC
Sbjct: 162 GPYYVQAVNERNGENKTSPLIYLSVARDVGTPETMAPVIVITPGNRSVVAGSSE-VTLEC 220

Query: 148 KASGLP--EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT---NS 202
            A+  P  +  + W  NG  I+    +  R      +TI N   SDTG Y C AT   ++
Sbjct: 221 IANARPVEDLSVSWKRNGVRITSGLHSFGR-----HLTISNPTSSDTGVYVCEATLRGSA 275

Query: 203 LGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KE 258
                   +++++   P  T  P+    V+  +TV + C+  G P P + W  +     +
Sbjct: 276 FEPARAKAFLSII-EPPYFTAEPESRILVEVEETVDIVCQAMGVPLPTLQWYKDAISISK 334

Query: 259 LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPEDY 317
           L   RY +L +G L+I  +   DSG + CFA N+ G  Q    L V       T  P D 
Sbjct: 335 LQNPRYKVLSSGGLRIQKLRPEDSGIFQCFATNEGGEIQTHTYLDVTNVAPAFTQLPVDT 394

Query: 318 EVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELD 375
            V  G +A  +C     P  K +I+W RG+  +   S   PRF+      L +T     D
Sbjct: 395 TVTDGMTAILKCEVSGAP--KPAIMWKRGNHILASGSVRIPRFMLLESGGLQITPVFIQD 452

Query: 376 SGQYTCRAQTELDFIEAQATLTV---QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQ-SL 431
           +G YTC A      + A A LTV      +  P +  +I+   A     + +   P+ SL
Sbjct: 453 AGNYTCYAANTEGSLNASAALTVWNRTSIINPPEDRVVIKGTTATLDCGATH--DPRISL 510

Query: 432 RGHFRGYKV--------QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAF 483
           R  ++   V        +   EKDG   I +         T E+          AR+   
Sbjct: 511 RYVWKKDNVVITPSSSSRIVVEKDGSLLISQTWSGDIGDYTCEIISEGGNDSRMARL--- 567

Query: 484 NGAYNGPPSEIISFV-TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
                    E+I    +P+ +  ++ S       S    L WV+P   N  ++ Y ++  
Sbjct: 568 ---------EVIELPHSPQNLLASLNSAH-----SHTVMLSWVRPFDGNSPVLYYIVELS 613

Query: 543 ------SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG---AE 593
                  V  + VGP +           T   + GL P+  Y+  +    + G G    E
Sbjct: 614 ENNSPWKVHLSNVGPEM-----------TGVAVRGLTPARTYQFRVCAVNQVGKGQYSTE 662

Query: 594 SKYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
           +  L      P   P N+   G T  ++++ W   PE EHN     Y + +R       +
Sbjct: 663 TSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEY 722

Query: 651 NQDDVLDWRQSELVLANQPTFQPYEIKV 678
            Q ++     +  ++     +  YEI+V
Sbjct: 723 QQRNITSPEVNYCLVTELIIWTQYEIQV 750



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 2/142 (1%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP N   +  + A +  V+W+P  P+S  G+ +GYK+  W E D      ++ V   
Sbjct: 1606 PALAPQNVQ-VNPLTASQLEVTWDPPPPESQNGNIQGYKIYYW-EADSRNETEKMKVLFL 1663

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
              T  ++      +K    + AFN A +GP S+     T E  PGT   L    + S+  
Sbjct: 1664 PETAVKLKNLTSHTKYLVSISAFNAAGDGPKSDPRQGHTHEAAPGTPSFLAFSEITSTTL 1723

Query: 521  YLKWVKPEQPNGVLMGYKIKYQ 542
             + W +P   NG+L GY++ Y+
Sbjct: 1724 NVSWGEPLAANGILQGYRVVYE 1745



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 81/199 (40%), Gaps = 18/199 (9%)

Query: 389 FIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
           F  A    T+Q VP   P N    + +++      WNP   Q + G  +GYK+  W    
Sbjct: 761 FSRAVTEYTLQGVPTAPPQNVQ-AEAVNSTTIQFLWNPPPQQFINGINQGYKLLAWPADV 819

Query: 448 GEGSIRELI------VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
            E S    I      V+ G    T + KF   +     VL F    +GPPS      T E
Sbjct: 820 PEASTVVTIAPDFHGVHHG--YITNLKKF---TAYLTSVLCFTTPGDGPPSAPQLIWTHE 874

Query: 502 GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
             PG V  L    +  ++  + W +P + NGV+ GY+I ++       G    RL    +
Sbjct: 875 DKPGAVGHLSFTEILDTSLKVSWQEPLEKNGVITGYQISWEV-----YGKNDSRLTRTLN 929

Query: 562 PTTTSAKLAGLEPSTKYRI 580
            TT   K+ GL   T Y I
Sbjct: 930 STTHEHKIKGLSSLTTYTI 948



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 96/233 (41%), Gaps = 31/233 (13%)

Query: 388  DF-IEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV----- 440
            DF +E +A  T+Q VP E PS F  +        ++ W P   +SL G  +GY++     
Sbjct: 1468 DFSVETEAVTTLQDVPGEPPS-FISVTPHTTSSVLIQWQPPRDESLNGLLQGYRIYYREL 1526

Query: 441  --------QTWTEKDGEGSIREL-------IVNKGESTTTEVDKFVPASKNFARVL-AFN 484
                    ++ T K       EL        VN   + TT     +   + +  V+ A+N
Sbjct: 1527 EYEAASATESKTLKTPSALRAELTAQSSFKTVNSSSTLTTYELTHLRKYRRYEVVMTAYN 1586

Query: 485  GAYNGPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKY 541
                 P S  +     E  P    Q+++  PL +S   + W    PE  NG + GYKI Y
Sbjct: 1587 IIGESPASAPVEVFVGEAAPALAPQNVQVNPLTASQLEVTWDPPPPESQNGNIQGYKIYY 1646

Query: 542  QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
                        E++  +  P  T+ KL  L   TKY + ++ +  AGDG +S
Sbjct: 1647 WEADSRNE---TEKMKVLFLP-ETAVKLKNLTSHTKYLVSISAFNAAGDGPKS 1695



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 21/200 (10%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V  Q   G   GYK+  +  KD +   R  +V  
Sbjct: 1180 VPSAAPENVS-AEAVSSTQILLTWASVPEQDQNGLILGYKI-LFRAKDLDPEPRSHVVRG 1237

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNG-PPSEIISFVTPEGVPGTVQSLEAIPLGSS 518
              + +  +           +VLAF    NG P S ++   T +  PG    L    +  +
Sbjct: 1238 NHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSSPLVLERTKDDAPGPPVRLVFPEVRLT 1297

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGT-------KVGPLLERLPYISDPTTTSAKLAG 571
            +  + W  PE+PNG+++GY+I Y+    +       +VG  + +         T+ +LA 
Sbjct: 1298 SVRIVWQPPEEPNGIILGYQIAYRLASSSPNTFTTVEVGATVRQF--------TATELA- 1348

Query: 572  LEPSTKYRIHLAGYTKAGDG 591
              P + Y   L+  T+ G G
Sbjct: 1349 --PESAYIFRLSAKTRQGWG 1366



 Score = 47.4 bits (111), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 66/166 (39%), Gaps = 8/166 (4%)

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
           TE    +  ++G  +VLTC   G+   E  W+HN  ELT    T        I  +   D
Sbjct: 13  TEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMHNDSELT----TYTSEYKYIIPSLQRLD 68

Query: 282 SGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           +G Y C  RN++G   Q    + V    +  D  +   V  G +A      ++    +  
Sbjct: 69  AGFYRCVVRNRMGALLQRRSEVQVAYMGNFMDTDQRKTVSQGHAAILNLLPITS-CPRPQ 127

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + W R    I   +  R   + +  L +  ++  DSG Y  +A  E
Sbjct: 128 VTWFREGHKIIPSN--RIAITLENQLVILAAAASDSGPYYVQAVNE 171



 Score = 40.4 bits (93), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 102/257 (39%), Gaps = 27/257 (10%)

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGTVQSLEAI-PLGSS 518
            E+T  EV++  P +    R+ A N   +   S E  +  T + VPG   S  ++ P  +S
Sbjct: 1439 EATACEVERLRPFTSYKLRLKATNDIGDSDFSVETEAVTTLQDVPGEPPSFISVTPHTTS 1498

Query: 519  AFYLKWVKP--EQPNGVLMGYKIKYQSVK---------GTKVGPLLERLPYI-------- 559
            +  ++W  P  E  NG+L GY+I Y+ ++          T   P   R            
Sbjct: 1499 SVLIQWQPPRDESLNGLLQGYRIYYRELEYEAASATESKTLKTPSALRAELTAQSSFKTV 1558

Query: 560  -SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYV----PFKNPDNVEGRGS 613
             S  T T+ +L  L    +Y + +  Y   G+  A +    +V    P   P NV+    
Sbjct: 1559 NSSSTLTTYELTHLRKYRRYEVVMTAYNIIGESPASAPVEVFVGEAAPALAPQNVQVNPL 1618

Query: 614  TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
            T + L ++W   P    N     Y+I++   ++     +  VL   ++ + L N  +   
Sbjct: 1619 TASQLEVTWDPPPPESQNGNIQGYKIYYWEADSRNETEKMKVLFLPETAVKLKNLTSHTK 1678

Query: 674  YEIKVVQTWTEKDGEGS 690
            Y + +       DG  S
Sbjct: 1679 YLVSISAFNAAGDGPKS 1695


>gi|338723805|ref|XP_003364801.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Equus
           caballus]
          Length = 1183

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 164/514 (31%), Positives = 240/514 (46%), Gaps = 28/514 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           LR   + L CI  G P P   W K DG +PIN   R    N+ K+L I  V  +D G+Y 
Sbjct: 277 LRGNVLSLECIAEGLPTPIIYWIKEDGTLPIN---RTFYRNFKKTLQILQVSEADSGNYQ 333

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A  ++I ++V AAPY+ + P+ +  +  E  T  C+A+G P+P I W+ NG
Sbjct: 334 CIAKNALG-AIHHTISVTVKAAPYWIMAPQNLVLSPGEDGTLICRANGKPKPRISWLSNG 392

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I  
Sbjct: 393 VPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT 452

Query: 224 APKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFA 280
           +    Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I      
Sbjct: 453 SANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALREDIYVLHENGTLEIPVAQKD 512

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G + +F C    D +L  +
Sbjct: 513 STGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTPT 572

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           + WL+ +   +  ++ RF    D+ L VT  S+ D G YTC A T LD + A A L V  
Sbjct: 573 VTWLKDNG--ELPNDGRFTVDKDH-LVVTDVSDDDGGTYTCVANTTLDTVSASAVLRVVD 629

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
               P +  L   +D K   +SW P    +       + ++        G         G
Sbjct: 630 VPNPPFDLELTDQLD-KSVQLSWTPGDDNN--SPITKFIIEYEDAMHEAGLWHHQTEVSG 686

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPGTVQSLEAIPL 515
             TT ++ K  P      RV+A N      PSE     +     P+  P  V+ L + P 
Sbjct: 687 TQTTAQL-KLSPYVNYSFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEP- 744

Query: 516 GSSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
                 + W KP    + NG  + YK+ ++   G
Sbjct: 745 --DNLVITW-KPLNGFESNGPGLQYKVSWRQKDG 775



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 150/600 (25%), Positives = 250/600 (41%), Gaps = 63/600 (10%)

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEE----TVTFECKASGLPEPEIHWVH 161
           ++  + + + Y +  S    P F + PE   + +EE     ++ EC A GLP P I+W+ 
Sbjct: 242 IAANLSDTEFYGVKSSRERPPTF-LTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWIK 300

Query: 162 NGK--PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
                PI++      +K     + I  + ++D+GNY C A N+LG ++  + V V A AP
Sbjct: 301 EDGTLPINRTFYRNFKKT----LQILQVSEADSGNYQCIAKNALGAIHHTISVTVKA-AP 355

Query: 220 EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI-TD 276
               AP++     G+   L CR  G PKP ++W+ N    E+     +    GD  I ++
Sbjct: 356 YWIMAPQNLVLSPGEDGTLICRANGKPKPRISWLSNGVPIEIAPDDPSRKIDGDTIIFSN 415

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSD 334
           V    S  Y C A N+ G    +  + V       +T     Y+V A + A   C     
Sbjct: 416 VQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTSANTLYQVIANRPALLDCAFFGS 475

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           P    +I W +G++      E  +V   + +L +  + +  +G YTC A+ +L   + + 
Sbjct: 476 P--LPTIEWFKGAKGSALR-EDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEV 532

Query: 395 TLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE-G 450
            L ++ P   ++ P  + ++Q    + + VS+       ++         TW + +GE  
Sbjct: 533 HLEIKDPTRIIKQPE-YAVVQ----RGSTVSFE----CKVKHDHTLTPTVTWLKDNGELP 583

Query: 451 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGV------P 504
           +     V+K     T+V                 G Y    +  +  V+   V      P
Sbjct: 584 NDGRFTVDKDHLVVTDVSD------------DDGGTYTCVANTTLDTVSASAVLRVVDVP 631

Query: 505 GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT 564
                LE       +  L W   +  N  +  + I+Y+         L      +S  T 
Sbjct: 632 NPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYED--AMHEAGLWHHQTEVSG-TQ 688

Query: 565 TSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNL 618
           T+A+L  L P   Y   +      G      A  +YL     P KNP  VEG GS P+NL
Sbjct: 689 TTAQLK-LSPYVNYSFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNL 747

Query: 619 VISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           VI+W  +   E N P  +Y++ WR+ +  + W    VL    S+ +++  PTF PY IKV
Sbjct: 748 VITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS--VLVANVSKYIVSGTPTFVPYLIKV 805



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 149/606 (24%), Positives = 235/606 (38%), Gaps = 73/606 (12%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 374 LICRANGKPKPRISWLSNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 429

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T                +C   G P P I W    K 
Sbjct: 430 NEYGYLLANAF-VNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 487

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 488 -GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQ 545

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P+      G TV   C+V       P V W+ +  EL   GR+T+ +   L +TDV+  D
Sbjct: 546 PEYAVVQRGSTVSFECKVKHDHTLTPTVTWLKDNGELPNDGRFTV-DKDHLVVTDVSDDD 604

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G YTC A   L T   S  L V +   + + P D E+              D S++LS 
Sbjct: 605 GGTYTCVANTTLDTVSASAVLRVVD---VPNPPFDLELTDQL----------DKSVQLS- 650

Query: 342 VWLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQA 394
            W  G +   PI     E E    ++  +      S    + Q          F + A  
Sbjct: 651 -WTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVN 709

Query: 395 TLTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQ 441
           +L   +P EA   +           T ++ + ++    V++W P++     G    YKV 
Sbjct: 710 SLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV- 768

Query: 442 TWTEKDGEGS-IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 500
           +W +KDG+      L+ N  +   +    FVP      +V A N     P   ++   + 
Sbjct: 769 SWRQKDGDDEWTSVLVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAVVMGHSG 825

Query: 501 EGVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLER 555
           E +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+
Sbjct: 826 EDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQTSPKRNRRHIEK 885

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGST 614
                  + T   L GLEP + Y +++      G+G A S  +F  P       EG  S 
Sbjct: 886 KILTFQGSKTHGMLPGLEPFSHYILNVRVVNGKGEGPASSDRVFNTP-------EGVPSA 938

Query: 615 PNNLVI 620
           P++L I
Sbjct: 939 PSSLKI 944



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 828  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQTSPKRNRRHIEKK 886

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 887  ILTFQGSKTHGMLPGLEPFSHYILNVRVVNGKGEGPASSDRVFNTPEGVPSAPSSLKIVN 946

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y ++YQ +  T ++GP+++ ++P       T   L  L
Sbjct: 947  PTLDSLTLEWDPPSHPNGILTEYTLRYQPINSTHELGPVVDLKIP----ANKTRWTLKNL 1002

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1003 NFSTRYKFYFYAQTSAGSGSQ 1023



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 136/344 (39%), Gaps = 57/344 (16%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNGKPIS-QAP 170
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  ISALEVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKD 86

Query: 171 PNPRRKVGPNRITIENLR--KSDT--GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
           P    K G   +TI  +   K++T  G Y C A N  G    +  V   + +P  T+   
Sbjct: 87  PLVTMKPGSGTLTINIMSEGKAETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKL 146

Query: 227 DEYTV-DGKTVVLTCRVFGAPKPEVN-WIHN--QKELTGGRYTILETGDLKITDVAFADS 282
           +  T+ +G+ +VL C       P +  W+ N  Q+     R +    GDL  ++V   D+
Sbjct: 147 EPITLRNGQALVLPCSPPIGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDT 206

Query: 283 GE-YTCFAR-NKLGTAQGSGSLTVKE----------HTHITD-----------QPEDYEV 319
            E Y C+AR N   T Q    ++VK             +++D           +P  +  
Sbjct: 207 REDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFYGVKSSRERPPTFLT 266

Query: 320 EAGQSAT---FRCNAVSDPSLKLS-----IVWLR--GSEPIDFESEPRFVQSNDYSLTVT 369
             G ++     R N +S   +        I W++  G+ PI+      F ++   +L + 
Sbjct: 267 PEGNASNKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINR----TFYRNFKKTLQIL 322

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
           + SE DSG Y C A+  L  I    ++TV+     + AP N  L
Sbjct: 323 QVSEADSGNYQCIAKNALGAIHHTISVTVKAAPYWIMAPQNLVL 366


>gi|301613548|ref|XP_002936266.1| PREDICTED: neurofascin-like [Xenopus (Silurana) tropicalis]
          Length = 1176

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 187/717 (26%), Positives = 309/717 (43%), Gaps = 67/717 (9%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR++ + L CI  G P P  +W K G  + PS ++   N+ K+L I  V   D
Sbjct: 265 TSSSKLVLRDEDLLLECIASGVPTPDIMWYKKGGEL-PSRKLKFENFNKTLRIIGVSEED 323

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C+ SN +G  + ++I + V AAPY+  EP+ +  A  E     C+ASG P+P I 
Sbjct: 324 SGEYFCQASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGENGRLVCRASGSPKPTIQ 382

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W  NG       PNP  ++  + I    ++  ++  Y CNA+N  GY+  + +V++L   
Sbjct: 383 WFMNGDATEVGAPNPNFEIAGDTIIFREVQSGNSAVYQCNASNEHGYLLANAFVSIL-DV 441

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P     P+++    ++     L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 442 PSRMLGPRNQLIRVIEYNRTQLDCPFFGSPIPTLRWFKNGQGSNLDGGNYRVHENGTLEI 501

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             V   D G+YTC A N LG A+ +  L VKE T I   PED   + G S    C   SD
Sbjct: 502 NTVRKEDQGKYTCVATNILGNAENTVRLEVKEPTRIVKGPEDQIAKRGSSVHLDCRVRSD 561

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
            SL+L++ W++    +   S    ++ ++  LT+   +E D G YTC A+TELD   ++A
Sbjct: 562 SSLRLTVTWIKDDTQLYINSR---MKKDEDGLTIFGVAEKDQGAYTCVAKTELDQDSSKA 618

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRE 454
            LT+Q   + P +  L +    +   ++W P    +      G+ VQ   ++   G+   
Sbjct: 619 YLTIQDKPDPPQDLELTEP-SVRSVRLTWVPGDDNN--SPITGFIVQFEEDRHQPGTWHN 675

Query: 455 LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
           L  +   +  + + +  P      RVLA N   +  PS         G P      +   
Sbjct: 676 L-ASVPANVNSVILQLSPYVNYQFRVLALNELGSSMPSPSSERFQTAGAPPETNPGDVKG 734

Query: 515 LGSSA--FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
            G+S     + W  +   Q  G  + Y +K++     +        P+ +     +  + 
Sbjct: 735 AGTSKNNMEITWTPLNSTQAYGPNLRYNVKWRQRHTGE--------PWSNITVWDNKHVV 786

Query: 571 GLEPS-TKYRIHLAGYTKAGDGAE-SKYLFY----VPFKNPDNVEGRGSTPNNLVISWTA 624
              P  T+Y + +    + G   E S  + Y     P   P +++ R      + + WT 
Sbjct: 787 WNTPVYTQYELRVQAENEFGKAPEPSTMIGYSGEDYPKAAPTDIKLRVMNSTAISLQWTR 846

Query: 625 MPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTE 684
           +          +YR ++                WR+S L            +K V    +
Sbjct: 847 VAPASIQGSLLEYRAYF----------------WRESSL------------LKGVWVSRK 878

Query: 685 KDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
           K  +  +       G+     V + +P S     ++A NG  +GP S++  F TPEG
Sbjct: 879 KQQQSFM-------GDRVRGIVSQLIPYSIYKLYLVAVNGRGDGPKSDVKEFTTPEG 928



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 23/229 (10%)

Query: 378  QYTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
            QY  R Q E +F +A    T+        P  AP++  L +V+++    + W  V+P S+
Sbjct: 794  QYELRVQAENEFGKAPEPSTMIGYSGEDYPKAAPTDIKL-RVMNSTAISLQWTRVAPASI 852

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNK--------GESTTTEVDKFVPASKNFARVLAF 483
            +G    Y+   W E      ++ + V++        G+     V + +P S     ++A 
Sbjct: 853  QGSLLEYRAYFWRES---SLLKGVWVSRKKQQQSFMGDRVRGIVSQLIPYSIYKLYLVAV 909

Query: 484  NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQS 543
            NG  +GP S++  F TPEGVP   +             ++W  PE PNG L  Y ++ Q 
Sbjct: 910  NGRGDGPKSDVKEFTTPEGVPSAPKYFRVYEPNREMIVVEWGHPEHPNGNLTAYNLRIQP 969

Query: 544  VKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
              GT+ G  + E L        T   L   +P ++YR  +   T+ G G
Sbjct: 970  FNGTRTGKAVFETLSR----NQTKYTLQRTDPVSRYRFAINARTQVGAG 1014



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 127/298 (42%), Gaps = 34/298 (11%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPPNP----RRKVGPNRITIENLRKSDT--GN 194
           + +  EC+A G P P   W  NGK  + A  +P    RR+ G   I I    + +   G 
Sbjct: 70  DNILIECEAQGNPYPMFSWTKNGKFYNVA-KDPRVSFRRRSGTLEIEIHGGGRPEDYEGE 128

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNW 252
           Y C+A N  G    +  +  ++ +P   +   D   V +G  ++L C    G P P + W
Sbjct: 129 YQCSARNQHGTALSNKILLQVSRSPLWPKENLDPVVVNEGAFLILQCNPPHGLPPPVIFW 188

Query: 253 IHNQKE--LTGGRYTILETGDLKITDVAFADS-GEYTCFARNKL-GTAQGSGSLTVKEHT 308
           + +  E  +   R +    GDL  ++V   D+  +Y+C AR+    T Q     T+K  T
Sbjct: 189 MSSLMEPIVQDKRVSQGLNGDLYFSNVLRQDTQTDYSCNARSHFTHTIQQKNPYTLKVLT 248

Query: 309 H--ITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWL-RGSEPIDFESE 355
              + ++   + +  G S++            C A   P+    I+W  +G E     S 
Sbjct: 249 TRGVPERTPTFLLPTGTSSSKLVLRDEDLLLECIASGVPT--PDIMWYKKGGE---LPSR 303

Query: 356 PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
               ++ + +L +   SE DSG+Y C+A  ++  I    ++ V+     L+ P N  L
Sbjct: 304 KLKFENFNKTLRIIGVSEEDSGEYFCQASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 361


>gi|53729306|ref|NP_001004493.1| neurofascin isoform 2 precursor [Gallus gallus]
          Length = 1272

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 133/375 (35%), Positives = 192/375 (51%), Gaps = 13/375 (3%)

Query: 37  YVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEF 96
           Y T   ++ LR   + L CI  G P P  +W K G  + P+ +    N+ K+L I +V  
Sbjct: 268 YGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGGEL-PAGKTKLENFNKALRISNVSE 326

Query: 97  SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE 156
            D G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P 
Sbjct: 327 EDSGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPQNLILAPGEDGRLVCRANGNPKPS 385

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           I W+ NG+PI  +PPNP R+V  + I   + +   +  Y CNA+N  GY+  + +V+VL 
Sbjct: 386 IQWLVNGEPIEGSPPNPSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLD 445

Query: 217 HAPEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDL 272
             P I  AP+++    +      L C  FG+P P + W  N +   L GG Y   E G L
Sbjct: 446 VPPRIL-APRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQGNMLDGGNYKAHENGSL 504

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV 332
           +++     D G YTC A N LG  +    L VK+ T I   PED  V+ G      C   
Sbjct: 505 EMSMARKEDQGIYTCVATNILGKVEAQVRLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVK 564

Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
            DP+LKL++ WL+   P+   +    ++  D  LT+   +E D G YTC A TELD   A
Sbjct: 565 HDPTLKLTVTWLKDDAPLYIGNR---MKKEDDGLTIYGVAEKDQGDYTCVASTELDKDSA 621

Query: 393 QATLTVQVPLEAPSN 407
           +A LTV   L  P+N
Sbjct: 622 KAYLTV---LAIPAN 633



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 153/672 (22%), Positives = 258/672 (38%), Gaps = 104/672 (15%)

Query: 73  PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGEAKSYSIDLSV----- 122
           PI+   R+SQG  G  L   +V   D Q  Y+C      ++ + +   Y++ +       
Sbjct: 183 PIHQDKRVSQGQNG-DLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTKKPHN 241

Query: 123 ----------------------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV 160
                                    PY T   + +    +  +  EC ASG+P P+I W 
Sbjct: 242 ETSLRNHTDMYSARGVTETTPSFMYPYGTSSSQMVLRGVD--LLLECIASGVPAPDIMWY 299

Query: 161 HNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
             G    + P    +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP
Sbjct: 300 KKG---GELPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-AP 355

Query: 220 EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKI 274
              + P++     G+   L CR  G PKP + W+ N + + G      R    +T  +  
Sbjct: 356 YWLDEPQNLILAPGEDGRLVCRANGNPKPSIQWLVNGEPIEGSPPNPSREVAGDT--IVF 413

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
            D     S  Y C A N+ G    +  ++V +       P +  ++  Q    R +    
Sbjct: 414 RDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRILAPRNQLIKVIQYNRTRLDCPFF 473

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
            S   ++ W +  +    +        N  SL ++ + + D G YTC A   L  +EAQ 
Sbjct: 474 GSPIPTLRWFKNGQGNMLDGGNYKAHENG-SLEMSMARKEDQGIYTCVATNILGKVEAQV 532

Query: 395 TLTVQVPLE--------------APSNFTLIQVIDAKKAVVSW-NPVSPQSLRGHFR--- 436
            L V+ P                 P     ++     K  V+W    +P  +    +   
Sbjct: 533 RLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKED 592

Query: 437 -GYKVQTWTEKDGEGSIRELIVNKGEST---TTEVDKFVPASKNFARVLAFNGAYNGPPS 492
            G  +    EKD           +G+ T   +TE+DK   ++K +  VLA       P +
Sbjct: 593 DGLTIYGVAEKD-----------QGDYTCVASTELDK--DSAKAYLTVLAI------PAN 633

Query: 493 EIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPL 552
            +     P+  P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G  
Sbjct: 634 RLRDL--PKERPDRPRDLELSDLAERSVKLTWIPGDDNNSPITDYIVQFEEDR-FQPGTW 690

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES----KYLF--YVPFKNPD 606
                Y   P   ++ L  L P   Y+  +      G    S    +Y      P  NP 
Sbjct: 691 HNHSRY---PGNVNSALLSLSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPT 747

Query: 607 NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLA 666
            V+G G+  NN+ I+WT +   +   P+ +Y + WRR +   +W  + V   R    V+ 
Sbjct: 748 GVQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRH---VVW 804

Query: 667 NQPTFQPYEIKV 678
           N P + PYEIKV
Sbjct: 805 NTPIYVPYEIKV 816



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 145/637 (22%), Positives = 239/637 (37%), Gaps = 100/637 (15%)

Query: 15   ILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI 74
            +L N   + +       AP+ Q +       ++  +  L C F G+P+P   W K+G   
Sbjct: 435  LLANAFVSVLDVPPRILAPRNQLIK-----VIQYNRTRLDCPFFGSPIPTLRWFKNGQ-- 487

Query: 75   NPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV 130
               + +  GNY      SL +      DQG YTC  +N +G+ ++  + L V        
Sbjct: 488  --GNMLDGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEA-QVRLEVKDPTRIVR 544

Query: 131  EPEFINAAEEETVTFECKASGLPEPE--IHWVHNGKPISQAPPNPRRKVGPNRITIENLR 188
             PE             C+    P  +  + W+ +  P+       R K   + +TI  + 
Sbjct: 545  GPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGN---RMKKEDDGLTIYGVA 601

Query: 189  KSDTGNYGCNATNSLGYVYKDVYV-------NVLAHAP-EITEAPKDEYTVD--GKTVVL 238
            + D G+Y C A+  L       Y+       N L   P E  + P+D    D   ++V L
Sbjct: 602  EKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDLPKERPDRPRDLELSDLAERSVKL 661

Query: 239  T--------------CRVFGAPKPEVNWIHNQKELTGG--------------RYTILETG 270
            T                 F   + +    HN     G               ++ ++   
Sbjct: 662  TWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHSRYPGNVNSALLSLSPYVNYQFRVIAVN 721

Query: 271  DLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN 330
            D+  +  +       T  AR ++      G+ T K +  IT  P +     G        
Sbjct: 722  DVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYG-------- 773

Query: 331  AVSDPSLKLSIVWLR----GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
                P+L+  + W R    GS   +    PR V  N                Y  + Q E
Sbjct: 774  ----PNLRYIVRWRRRDPRGSWYNETVKAPRHVVWNTPIYV----------PYEIKVQAE 819

Query: 387  LDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
             DF  A    T         P  AP++   I+V+++    ++W  V   +++G  + Y+ 
Sbjct: 820  NDFGRAPEPETYIGYSGEDYPKAAPTDVR-IRVLNSTAIALTWTRVHLDTIQGQLKEYRA 878

Query: 441  QTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
              W +     ++     R+ +   G+     V +  P S     ++  NG  +GP SE+ 
Sbjct: 879  YFWRDSSLLKNLWVSKKRQYVSFPGDRNRGIVSRLFPYSNYKLEMVVTNGRGDGPRSEVK 938

Query: 496  SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVG-PLLE 554
             F TPEGVP + + L        +  L+W  PE PNGVL GY ++YQ+  G+K G  L+E
Sbjct: 939  EFPTPEGVPSSPRYLRIRQPNLESINLEWDHPEHPNGVLTGYNLRYQAFNGSKTGRTLVE 998

Query: 555  RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
                   P  T   +   +P ++YR  L   T+ GDG
Sbjct: 999  NF----SPNQTRFTVQRTDPISRYRFFLRARTQVGDG 1031



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 89/222 (40%), Gaps = 37/222 (16%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELT------------G 261
           L   P IT+    +Y VD +  + + C   G P P  +W  N K                
Sbjct: 38  LPQPPTITKQSVKDYIVDPRDNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRS 97

Query: 262 GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP------- 314
           G   I   G  +  D      GEY CFARN  GTA     L+ K H  ++  P       
Sbjct: 98  GTLVIDFHGGGRPDDY----EGEYQCFARNDYGTA-----LSSKIHLQVSRSPLWPKEKV 148

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS-EPIDFESEPRFVQSND--YSLTVTKS 371
           +  EV+ G   + +CN        + I W+  S EPI  +      Q+ D  +S  + + 
Sbjct: 149 DVIEVDEGAPLSLQCNPPPGLPPPV-IFWMSSSMEPIHQDKRVSQGQNGDLYFSNVMLQD 207

Query: 372 SELDSGQYTCRAQTELDF-IEAQATLTVQVPLEAPSNFTLIQ 412
           ++ D   Y+C A+      I+ +   T++V  + P N T ++
Sbjct: 208 AQTD---YSCNARFHFTHTIQQKNPYTLKVKTKKPHNETSLR 246



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 124/319 (38%), Gaps = 59/319 (18%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSDT--GNY 195
           + +  EC+A G P P   W  NGK   +++ P  + RR+ G   I      + D   G Y
Sbjct: 58  DNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHGGGRPDDYEGEY 117

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNW-- 252
            C A N  G          ++ +P   +   D   VD G  + L C       P V +  
Sbjct: 118 QCFARNDYGTALSSKIHLQVSRSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPPPVIFWM 177

Query: 253 ------IHNQKELTGGRYTILETGDLKITDVAFADS-GEYTCFARN-------------- 291
                 IH  K ++ G     + GDL  ++V   D+  +Y+C AR               
Sbjct: 178 SSSMEPIHQDKRVSQG-----QNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTL 232

Query: 292 KLGTAQGSGSLTVKEHTH------ITDQPEDYEVEAGQSAT----------FRCNAVSDP 335
           K+ T +     +++ HT       +T+    +    G S++            C A   P
Sbjct: 233 KVKTKKPHNETSLRNHTDMYSARGVTETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVP 292

Query: 336 SLKLSIVWL-RGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +    I+W  +G E     +    +++ + +L ++  SE DSG+Y C A  ++  I    
Sbjct: 293 A--PDIMWYKKGGE---LPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTI 347

Query: 395 TLTVQVP---LEAPSNFTL 410
           ++ V+     L+ P N  L
Sbjct: 348 SVRVKAAPYWLDEPQNLIL 366


>gi|63660|emb|CAA46330.1| neurofascin [Gallus gallus]
          Length = 1272

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 133/375 (35%), Positives = 192/375 (51%), Gaps = 13/375 (3%)

Query: 37  YVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEF 96
           Y T   ++ LR   + L CI  G P P  +W K G  + P+ +    N+ K+L I +V  
Sbjct: 268 YGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGGEL-PAGKTKLENFNKALRISNVSE 326

Query: 97  SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE 156
            D G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P 
Sbjct: 327 EDSGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPQNLILAPGEDGRLVCRANGNPKPS 385

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           I W+ NG+PI  +PPNP R+V  + I   + +   +  Y CNA+N  GY+  + +V+VL 
Sbjct: 386 IQWLVNGEPIEGSPPNPSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLD 445

Query: 217 HAPEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDL 272
             P I  AP+++    +      L C  FG+P P + W  N +   L GG Y   E G L
Sbjct: 446 VPPRIL-APRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQGNMLDGGNYKAHENGSL 504

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV 332
           +++     D G YTC A N LG  +    L VK+ T I   PED  V+ G      C   
Sbjct: 505 EMSMARKEDQGIYTCVATNILGKVEAQVRLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVK 564

Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
            DP+LKL++ WL+   P+   +    ++  D  LT+   +E D G YTC A TELD   A
Sbjct: 565 HDPTLKLTVTWLKDDAPLYIGNR---MKKEDDGLTIYGVAEKDQGDYTCVASTELDKDSA 621

Query: 393 QATLTVQVPLEAPSN 407
           +A LTV   L  P+N
Sbjct: 622 KAYLTV---LAIPAN 633



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 153/672 (22%), Positives = 258/672 (38%), Gaps = 104/672 (15%)

Query: 73  PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGEAKSYSIDLSV----- 122
           PI+   R+SQG  G  L   +V   D Q  Y+C      ++ + +   Y++ +       
Sbjct: 183 PIHQDKRVSQGQNG-DLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTKKPHN 241

Query: 123 ----------------------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV 160
                                    PY T   + +    +  +  EC ASG+P P+I W 
Sbjct: 242 ETSLRNHTDMYSARGVTETTPSFMYPYGTSSSQMVLRGVD--LLLECIASGVPAPDIMWY 299

Query: 161 HNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
             G    + P    +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP
Sbjct: 300 KKG---GELPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-AP 355

Query: 220 EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKI 274
              + P++     G+   L CR  G PKP + W+ N + + G      R    +T  +  
Sbjct: 356 YWLDEPQNLILAPGEDGRLVCRANGNPKPSIQWLVNGEPIEGSPPNPSREVAGDT--IVF 413

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
            D     S  Y C A N+ G    +  ++V +       P +  ++  Q    R +    
Sbjct: 414 RDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRILAPRNQLIKVIQYNRTRLDCPFF 473

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
            S   ++ W +  +    +        N  SL ++ + + D G YTC A   L  +EAQ 
Sbjct: 474 GSPIPTLRWFKNGQGNMLDGGNYKAHENG-SLEMSMARKEDQGIYTCVATNILGKVEAQV 532

Query: 395 TLTVQVPLE--------------APSNFTLIQVIDAKKAVVSW-NPVSPQSLRGHFR--- 436
            L V+ P                 P     ++     K  V+W    +P  +    +   
Sbjct: 533 RLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKED 592

Query: 437 -GYKVQTWTEKDGEGSIRELIVNKGEST---TTEVDKFVPASKNFARVLAFNGAYNGPPS 492
            G  +    EKD           +G+ T   +TE+DK   ++K +  VLA       P +
Sbjct: 593 DGLTIYGVAEKD-----------QGDYTCVASTELDK--DSAKAYLTVLAI------PAN 633

Query: 493 EIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPL 552
            +     P+  P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G  
Sbjct: 634 RLRDL--PKERPDRPRDLELSDLAERSVKLTWIPGDDNNSPITDYIVQFEEDR-FQPGTW 690

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES----KYLF--YVPFKNPD 606
                Y   P   ++ L  L P   Y+  +      G    S    +Y      P  NP 
Sbjct: 691 HNHSRY---PGNVNSALLSLSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPT 747

Query: 607 NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLA 666
            V+G G+  NN+ I+WT +   +   P+ +Y + WRR +   +W  + V   R    V+ 
Sbjct: 748 GVQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRH---VVW 804

Query: 667 NQPTFQPYEIKV 678
           N P + PYEIKV
Sbjct: 805 NTPIYVPYEIKV 816



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 145/637 (22%), Positives = 239/637 (37%), Gaps = 100/637 (15%)

Query: 15   ILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI 74
            +L N   + +       AP+ Q +       ++  +  L C F G+P+P   W K+G   
Sbjct: 435  LLANAFVSVLDVPPRILAPRNQLIK-----VIQYNRTRLDCPFFGSPIPTLRWFKNGQ-- 487

Query: 75   NPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV 130
               + +  GNY      SL +      DQG YTC  +N +G+ ++  + L V        
Sbjct: 488  --GNMLDGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEA-QVRLEVKDPTRIVR 544

Query: 131  EPEFINAAEEETVTFECKASGLPEPE--IHWVHNGKPISQAPPNPRRKVGPNRITIENLR 188
             PE             C+    P  +  + W+ +  P+       R K   + +TI  + 
Sbjct: 545  GPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGN---RMKKEDDGLTIYGVA 601

Query: 189  KSDTGNYGCNATNSLGYVYKDVYV-------NVLAHAP-EITEAPKDEYTVD--GKTVVL 238
            + D G+Y C A+  L       Y+       N L   P E  + P+D    D   ++V L
Sbjct: 602  EKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDLPKERPDRPRDLELSDLAERSVKL 661

Query: 239  T--------------CRVFGAPKPEVNWIHNQKELTGG--------------RYTILETG 270
            T                 F   + +    HN     G               ++ ++   
Sbjct: 662  TWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHSRYPGNVNSALLSLSPYVNYQFRVIAVN 721

Query: 271  DLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN 330
            D+  +  +       T  AR ++      G+ T K +  IT  P +     G        
Sbjct: 722  DVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYG-------- 773

Query: 331  AVSDPSLKLSIVWLR----GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
                P+L+  + W R    GS   +    PR V  N                Y  + Q E
Sbjct: 774  ----PNLRYIVRWRRRDPRGSWYNETVKAPRHVVWNTPIYV----------PYEIKVQAE 819

Query: 387  LDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
             DF  A    T         P  AP++   I+V+++    ++W  V   +++G  + Y+ 
Sbjct: 820  NDFGRAPEPETYIGYSGEDYPKAAPTDVR-IRVLNSTAIALTWTRVHLDTIQGQLKEYRA 878

Query: 441  QTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
              W +     ++     R+ +   G+     V +  P S     ++  NG  +GP SE+ 
Sbjct: 879  YFWRDSSLLKNLWVSKKRQYVSFPGDRNRGIVSRLFPYSNYKLEMVVTNGRGDGPRSEVK 938

Query: 496  SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVG-PLLE 554
             F TPEGVP + + L        +  L+W  PE PNGVL GY ++YQ+  G+K G  L+E
Sbjct: 939  EFPTPEGVPSSPRYLRIRQPNLESINLEWDHPEHPNGVLTGYNLRYQAFNGSKTGRTLVE 998

Query: 555  RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
                   P  T   +   +P ++YR  L   T+ GDG
Sbjct: 999  NF----SPNQTRFTVQRTDPISRYRFFLRARTQVGDG 1031



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 89/222 (40%), Gaps = 37/222 (16%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELT------------G 261
           L   P IT+    +Y VD +  + + C   G P P  +W  N K                
Sbjct: 38  LPQPPTITKQSVKDYIVDPRDNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRS 97

Query: 262 GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP------- 314
           G   I   G  +  D      GEY CFARN  GTA     L+ K H  ++  P       
Sbjct: 98  GTLVIDFHGGGRPDDY----EGEYQCFARNDYGTA-----LSSKIHLQVSRSPLWPKEKV 148

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS-EPIDFESEPRFVQSND--YSLTVTKS 371
           +  EV+ G   + +CN        + I W+  S EPI  +      Q+ D  +S  + + 
Sbjct: 149 DVIEVDEGAPLSLQCNPPPGLPPPV-IFWMSSSMEPIHQDKRVSQGQNGDLYFSNVMLQD 207

Query: 372 SELDSGQYTCRAQTELDF-IEAQATLTVQVPLEAPSNFTLIQ 412
           ++ D   Y+C A+      I+ +   T++V  + P N T ++
Sbjct: 208 AQTD---YSCNARFHFTHTIQQKNPYTLKVKTKKPHNETSLR 246



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 124/319 (38%), Gaps = 59/319 (18%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSDT--GNY 195
           + +  EC+A G P P   W  NGK   +++ P  + RR+ G   I      + D   G Y
Sbjct: 58  DNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHGGGRPDDYEGEY 117

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNW-- 252
            C A N  G          ++ +P   +   D   VD G  + L C       P V +  
Sbjct: 118 QCFARNDYGTALSSKIHLQVSRSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPPPVIFWM 177

Query: 253 ------IHNQKELTGGRYTILETGDLKITDVAFADS-GEYTCFARN-------------- 291
                 IH  K ++ G     + GDL  ++V   D+  +Y+C AR               
Sbjct: 178 SSSMEPIHQDKRVSQG-----QNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTL 232

Query: 292 KLGTAQGSGSLTVKEHTH------ITDQPEDYEVEAGQSAT----------FRCNAVSDP 335
           K+ T +     +++ HT       +T+    +    G S++            C A   P
Sbjct: 233 KVKTKKPHNETSLRNHTDMYSARGVTETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVP 292

Query: 336 SLKLSIVWL-RGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +    I+W  +G E     +    +++ + +L ++  SE DSG+Y C A  ++  I    
Sbjct: 293 A--PDIMWYKKGGE---LPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTI 347

Query: 395 TLTVQVP---LEAPSNFTL 410
           ++ V+     L+ P N  L
Sbjct: 348 SVRVKAAPYWLDEPQNLIL 366


>gi|237858646|ref|NP_001153794.1| neurofascin isoform 6 precursor [Gallus gallus]
          Length = 1235

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 133/375 (35%), Positives = 192/375 (51%), Gaps = 13/375 (3%)

Query: 37  YVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEF 96
           Y T   ++ LR   + L CI  G P P  +W K G  + P+ +    N+ K+L I +V  
Sbjct: 251 YGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGGEL-PAGKTKLENFNKALRISNVSE 309

Query: 97  SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE 156
            D G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P 
Sbjct: 310 EDSGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPQNLILAPGEDGRLVCRANGNPKPS 368

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           I W+ NG+PI  +PPNP R+V  + I   + +   +  Y CNA+N  GY+  + +V+VL 
Sbjct: 369 IQWLVNGEPIEGSPPNPSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLD 428

Query: 217 HAPEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDL 272
             P I  AP+++    +      L C  FG+P P + W  N +   L GG Y   E G L
Sbjct: 429 VPPRIL-APRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQGNMLDGGNYKAHENGSL 487

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV 332
           +++     D G YTC A N LG  +    L VK+ T I   PED  V+ G      C   
Sbjct: 488 EMSMARKEDQGIYTCVATNILGKVEAQVRLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVK 547

Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
            DP+LKL++ WL+   P+   +    ++  D  LT+   +E D G YTC A TELD   A
Sbjct: 548 HDPTLKLTVTWLKDDAPLYIGNR---MKKEDDGLTIYGVAEKDQGDYTCVASTELDKDSA 604

Query: 393 QATLTVQVPLEAPSN 407
           +A LTV   L  P+N
Sbjct: 605 KAYLTV---LAIPAN 616



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 152/651 (23%), Positives = 257/651 (39%), Gaps = 79/651 (12%)

Query: 73  PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGEAKSYSIDLSV----- 122
           PI+   R+SQG  G  L   +V   D Q  Y+C      ++ + +   Y++ +       
Sbjct: 183 PIHQDKRVSQGQNG-DLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTTRGVT 241

Query: 123 -----LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
                   PY T   + +    +  +  EC ASG+P P+I W   G    + P    +  
Sbjct: 242 ETTPSFMYPYGTSSSQMVLRGVD--LLLECIASGVPAPDIMWYKKG---GELPAGKTKLE 296

Query: 178 GPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTV 236
             N+ + I N+ + D+G Y C A+N +G +   + V V A AP   + P++     G+  
Sbjct: 297 NFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYWLDEPQNLILAPGEDG 355

Query: 237 VLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDVAFADSGEYTCFARN 291
            L CR  G PKP + W+ N + + G      R    +T  +   D     S  Y C A N
Sbjct: 356 RLVCRANGNPKPSIQWLVNGEPIEGSPPNPSREVAGDT--IVFRDTQIGSSAVYQCNASN 413

Query: 292 KLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID 351
           + G    +  ++V +       P +  ++  Q    R +     S   ++ W +  +   
Sbjct: 414 EHGYLLANAFVSVLDVPPRILAPRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQGNM 473

Query: 352 FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE-------- 403
            +        N  SL ++ + + D G YTC A   L  +EAQ  L V+ P          
Sbjct: 474 LDGGNYKAHENG-SLEMSMARKEDQGIYTCVATNILGKVEAQVRLEVKDPTRIVRGPEDQ 532

Query: 404 ------APSNFTLIQVIDAKKAVVSW-NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
                  P     ++     K  V+W    +P  +    +        E DG        
Sbjct: 533 VVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMK-------KEDDGLTIYGVAE 585

Query: 457 VNKGEST---TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAI 513
            ++G+ T   +TE+DK   ++K +  VLA       P + +     P+  P   + LE  
Sbjct: 586 KDQGDYTCVASTELDK--DSAKAYLTVLAI------PANRLRDL--PKERPDRPRDLELS 635

Query: 514 PLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLE 573
            L   +  L W+  +  N  +  Y ++++  +  + G       Y   P   ++ L  L 
Sbjct: 636 DLAERSVKLTWIPGDDNNSPITDYIVQFEEDR-FQPGTWHNHSRY---PGNVNSALLSLS 691

Query: 574 PSTKYRIHLAGYTKAGDGAES----KYLF--YVPFKNPDNVEGRGSTPNNLVISWTAMPE 627
           P   Y+  +      G    S    +Y      P  NP  V+G G+  NN+ I+WT +  
Sbjct: 692 PYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEITWTPLNA 751

Query: 628 IEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            +   P+ +Y + WRR +   +W  + V   R    V+ N P + PYEIKV
Sbjct: 752 TQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRH---VVWNTPIYVPYEIKV 799



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 148/572 (25%), Positives = 218/572 (38%), Gaps = 54/572 (9%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P   W  +G PI     NPS  ++    G +++ +  +      Y C  S
Sbjct: 357 LVCRANGNPKPSIQWLVNGEPIEGSPPNPSREVA----GDTIVFRDTQIGSSAVYQCNAS 412

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  +SVL  P   + P  + I   +      +C   G P P + W  NG+ 
Sbjct: 413 NEHGYLLANAF-VSVLDVPPRILAPRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQG 471

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
                 N +       + +   RK D G Y C ATN LG V   V + V      I   P
Sbjct: 472 NMLDGGNYKAHEN-GSLEMSMARKEDQGIYTCVATNILGKVEAQVRLEV-KDPTRIVRGP 529

Query: 226 KDEYTVDGKTVVLTCRVFGAP--KPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSG 283
           +D+    G    L CRV   P  K  V W+ +   L  G     E   L I  VA  D G
Sbjct: 530 EDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKEDDGLTIYGVAEKDQG 589

Query: 284 EYTCFARNKLGTAQGSGSLTVKE--HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +YTC A  +L        LTV       + D P++      +      + +++ S+KL+ 
Sbjct: 590 DYTCVASTELDKDSAKAYLTVLAIPANRLRDLPKE---RPDRPRDLELSDLAERSVKLT- 645

Query: 342 VWLRGSE---PI-----DFESEPRF---VQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
            W+ G +   PI      FE E RF      N        +S L S       Q  +  +
Sbjct: 646 -WIPGDDNNSPITDYIVQFE-EDRFQPGTWHNHSRYPGNVNSALLSLSPYVNYQFRVIAV 703

Query: 391 EAQATLTVQVPLEAPS--------NFTLIQVIDAKK--AVVSWNPVSPQSLRGHFRGYKV 440
               +    +P E           N T +Q    +K    ++W P++     G    Y V
Sbjct: 704 NDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRYIV 763

Query: 441 QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 500
           + W  +D  GS     V            +VP      +V A N     P  E     + 
Sbjct: 764 R-WRRRDPRGSWYNETVKAPRHVVWNTPIYVPYE---IKVQAENDFGRAPEPETYIGYSG 819

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVG-PLLERLPYI 559
           E +P + + L        +  L+W  PE PNGVL GY ++YQ+  G+K G  L+E     
Sbjct: 820 EDLPSSPRYLRIRQPNLESINLEWDHPEHPNGVLTGYNLRYQAFNGSKTGRTLVENF--- 876

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             P  T   +   +P ++YR  L   T+ GDG
Sbjct: 877 -SPNQTRFTVQRTDPISRYRFFLRARTQVGDG 907



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 121/302 (40%), Gaps = 42/302 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSDT--GNY 195
           + +  EC+A G P P   W  NGK   +++ P  + RR+ G   I      + D   G Y
Sbjct: 58  DNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHGGGRPDDYEGEY 117

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNW-- 252
            C A N  G          ++ +P   +   D   VD G  + L C       P V +  
Sbjct: 118 QCFARNDYGTALSSKIHLQVSRSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPPPVIFWM 177

Query: 253 ------IHNQKELTGGRYTILETGDLKITDVAFADS-GEYTCFARNKL-GTAQGSG--SL 302
                 IH  K ++ G     + GDL  ++V   D+  +Y+C AR     T Q     +L
Sbjct: 178 SSSMEPIHQDKRVSQG-----QNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTL 232

Query: 303 TVKEHTHITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWL-RGSEPID 351
            VK    +T+    +    G S++            C A   P+    I+W  +G E   
Sbjct: 233 KVKTTRGVTETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPA--PDIMWYKKGGE--- 287

Query: 352 FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNF 408
             +    +++ + +L ++  SE DSG+Y C A  ++  I    ++ V+     L+ P N 
Sbjct: 288 LPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPQNL 347

Query: 409 TL 410
            L
Sbjct: 348 IL 349



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 76/193 (39%), Gaps = 36/193 (18%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELT------------G 261
           L   P IT+    +Y VD +  + + C   G P P  +W  N K                
Sbjct: 38  LPQPPTITKQSVKDYIVDPRDNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRS 97

Query: 262 GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP------- 314
           G   I   G  +  D      GEY CFARN  GTA     L+ K H  ++  P       
Sbjct: 98  GTLVIDFHGGGRPDDY----EGEYQCFARNDYGTA-----LSSKIHLQVSRSPLWPKEKV 148

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS-EPIDFESEPRFVQSND--YSLTVTKS 371
           +  EV+ G   + +CN        + I W+  S EPI  +      Q+ D  +S  + + 
Sbjct: 149 DVIEVDEGAPLSLQCNPPPGLPPPV-IFWMSSSMEPIHQDKRVSQGQNGDLYFSNVMLQD 207

Query: 372 SELDSGQYTCRAQ 384
           ++ D   Y+C A+
Sbjct: 208 AQTD---YSCNAR 217


>gi|148704862|gb|EDL36809.1| mCG125252 [Mus musculus]
          Length = 1254

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 164/520 (31%), Positives = 242/520 (46%), Gaps = 31/520 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W K DG  + P++R    N+ K+L I HV  +D G+Y C
Sbjct: 231 LRGNVLSLECIAEGLPTPIIYWIKEDG--MLPANRTFYRNFKKTLQITHVSEADSGNYQC 288

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I ++V AAPY+ V P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 289 IAKNALG-AVHHTISVTVKAAPYWIVAPQNLVLSPGENGTLICRANGNPKPRISWLTNGV 347

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  A  +P RK+  + I   N+++S +  Y CNA+N  GY+  + +VNVLA  P I  +
Sbjct: 348 PIEIALDDPSRKIDGDTIIFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILTS 407

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + + G L+I       
Sbjct: 408 ANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALHEDIYVLHDNGTLEIPVAQKDS 467

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L  +I
Sbjct: 468 TGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQPEYAVVQRGSKVSFECRVKHDHTLIPTI 527

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  ++ RF    D+ L V+   + D G YTC A T LD   A A L V   
Sbjct: 528 MWLKDNG--ELPNDERFSTDKDH-LVVSDVKDDDGGTYTCTANTTLDSASASAVLRVVDV 584

Query: 402 LEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRE 454
              P +  L   +D K   ++W       +P++     G    + ++        G  R 
Sbjct: 585 PNPPFDLELTNQLD-KSVQLTWTPGDDNNSPITSMWWFGFVAEFIIEYEDAMHDAGLWRH 643

Query: 455 LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPGTVQS 509
                G  TT ++ K  P      RV+A N      PSE     +     P+  P  V+ 
Sbjct: 644 QAEVSGTQTTAQL-KLSPYVNYSFRVMAENSIGRSMPSEASEQYLTKAAEPDQNPMAVEG 702

Query: 510 LEAIPLGSSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
           L   P       + W KP    Q NG  + YK+ ++   G
Sbjct: 703 LGTEP---DNLVITW-KPLNGFQSNGPGLQYKVSWRQKDG 738



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
           +P+ AP N   + V+++  A V W+PV P+S+RGH +GY++  W  +      R  I  K
Sbjct: 791 LPMVAPGNVR-VSVVNSTLAEVHWDPVPPKSVRGHLQGYRIYYWKTQSSSKRNRRHIEKK 849

Query: 460 -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 850 ILTFQGTKTHGMLPGLQPYSHYALNVRVVNGKGEGPASTDRGFHTPEGVPSAPSSLKIVN 909

Query: 515 LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
               +  L+W  P  PNG+L  Y ++YQ +  T ++GPL++ ++P       T   L  L
Sbjct: 910 PTLDSLTLEWDPPSHPNGILTEYILQYQPINSTHELGPLVDLKIP----ANKTRWTLKNL 965

Query: 573 EPSTKYRIHLAGYTKAGDGAE 593
             ST+Y+ +    T  G G++
Sbjct: 966 NFSTRYKFYFYAQTSVGPGSQ 986



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 143/605 (23%), Positives = 229/605 (37%), Gaps = 62/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+ S    Y C  S
Sbjct: 328 LICRANGNPKPRISWLTNGVPIEIALDDPSRKID----GDTIIFSNVQESSSAVYQCNAS 383

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T                +C   G P P I W   G  
Sbjct: 384 NKYGYLLANAF-VNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPMPTIEWF-KGTK 441

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
            S    +         + I   +K  TG Y C A N LG    +V++ +      I + P
Sbjct: 442 GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQP 500

Query: 226 KDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRYTILETGDLKITDVAFADSG 283
           +      G  V   CRV       P + W+ +  EL        +   L ++DV   D G
Sbjct: 501 EYAVVQRGSKVSFECRVKHDHTLIPTIMWLKDNGELPNDERFSTDKDHLVVSDVKDDDGG 560

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEV--EAGQSATFRCNAVSDPSLKLSI 341
            YTC A   L +A  S  L V +   + + P D E+  +  +S         D +  ++ 
Sbjct: 561 TYTCTANTTLDSASASAVLRVVD---VPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITS 617

Query: 342 VWLRG--SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQATLTV 398
           +W  G  +E I  E E     +  +      S    + Q          F + A+ ++  
Sbjct: 618 MWWFGFVAEFI-IEYEDAMHDAGLWRHQAEVSGTQTTAQLKLSPYVNYSFRVMAENSIGR 676

Query: 399 QVPLEAPSNFTLIQV-------------IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE 445
            +P EA   +                   +    V++W P++     G    YKV +W +
Sbjct: 677 SMPSEASEQYLTKAAEPDQNPMAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKV-SWRQ 735

Query: 446 KDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFV---TP 500
           KDG+     ++V N  +   +    FVP      +V A N     P P+ ++       P
Sbjct: 736 KDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAAVMGHSGEDLP 792

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
              PG V+      + S+   + W  V P+   G L GY+I Y   + +  +    +E+ 
Sbjct: 793 MVAPGNVR---VSVVNSTLAEVHWDPVPPKSVRGHLQGYRIYYWKTQSSSKRNRRHIEKK 849

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 T T   L GL+P + Y +++      G+G A +   F+ P       EG  S P
Sbjct: 850 ILTFQGTKTHGMLPGLQPYSHYALNVRVVNGKGEGPASTDRGFHTP-------EGVPSAP 902

Query: 616 NNLVI 620
           ++L I
Sbjct: 903 SSLKI 907



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 9/122 (7%)

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPN 616
           T T+A+L  L P   Y   +      G      A  +YL     P +NP  VEG G+ P+
Sbjct: 650 TQTTAQLK-LSPYVNYSFRVMAENSIGRSMPSEASEQYLTKAAEPDQNPMAVEGLGTEPD 708

Query: 617 NLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEI 676
           NLVI+W  +   + N P  +Y++ WR+ +  + W    V+    S+ +++  PTF PY I
Sbjct: 709 NLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLI 766

Query: 677 KV 678
           KV
Sbjct: 767 KV 768


>gi|38372283|sp|O42414.1|NFASC_CHICK RecName: Full=Neurofascin; Flags: Precursor
 gi|2467122|emb|CAA74726.1| neurofascin [Gallus gallus]
          Length = 1369

 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 133/375 (35%), Positives = 192/375 (51%), Gaps = 13/375 (3%)

Query: 37  YVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEF 96
           Y T   ++ LR   + L CI  G P P  +W K G  + P+ +    N+ K+L I +V  
Sbjct: 268 YGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGGEL-PAGKTKLENFNKALRISNVSE 326

Query: 97  SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE 156
            D G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P 
Sbjct: 327 EDSGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPQNLILAPGEDGRLVCRANGNPKPS 385

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           I W+ NG+PI  +PPNP R+V  + I   + +   +  Y CNA+N  GY+  + +V+VL 
Sbjct: 386 IQWLVNGEPIEGSPPNPSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLD 445

Query: 217 HAPEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDL 272
             P I  AP+++    +      L C  FG+P P + W  N +   L GG Y   E G L
Sbjct: 446 VPPRIL-APRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQGNMLDGGNYKAHENGSL 504

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV 332
           +++     D G YTC A N LG  +    L VK+ T I   PED  V+ G      C   
Sbjct: 505 EMSMARKEDQGIYTCVATNILGKVEAQVRLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVK 564

Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
            DP+LKL++ WL+   P+   +    ++  D  LT+   +E D G YTC A TELD   A
Sbjct: 565 HDPTLKLTVTWLKDDAPLYIGNR---MKKEDDGLTIYGVAEKDQGDYTCVASTELDKDSA 621

Query: 393 QATLTVQVPLEAPSN 407
           +A LTV   L  P+N
Sbjct: 622 KAYLTV---LAIPAN 633



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 152/668 (22%), Positives = 257/668 (38%), Gaps = 96/668 (14%)

Query: 73  PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGEAKSYSIDLSV----- 122
           PI+   R+SQG  G  L   +V   D Q  Y+C      ++ + +   Y++ +       
Sbjct: 183 PIHQDKRVSQGQNG-DLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTKKPHN 241

Query: 123 ----------------------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV 160
                                    PY T   + +    +  +  EC ASG+P P+I W 
Sbjct: 242 ETSLRNHTDMYSARGVTETTPSFMYPYGTSSSQMVLRGVD--LLLECIASGVPAPDIMWY 299

Query: 161 HNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
             G    + P    +    N+ + I N+ + D+G Y C A+N +G +   + V V A AP
Sbjct: 300 KKG---GELPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-AP 355

Query: 220 EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKI 274
              + P++     G+   L CR  G PKP + W+ N + + G      R    +T  +  
Sbjct: 356 YWLDEPQNLILAPGEDGRLVCRANGNPKPSIQWLVNGEPIEGSPPNPSREVAGDT--IVF 413

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
            D     S  Y C A N+ G    +  ++V +       P +  ++  Q    R +    
Sbjct: 414 RDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRILAPRNQLIKVIQYNRTRLDCPFF 473

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
            S   ++ W +  +    +        N  SL ++ + + D G YTC A   L  +EAQ 
Sbjct: 474 GSPIPTLRWFKNGQGNMLDGGNYKAHENG-SLEMSMARKEDQGIYTCVATNILGKVEAQV 532

Query: 395 TLTVQVPLE--------------APSNFTLIQVIDAKKAVVSW-NPVSPQSLRGHFRGYK 439
            L V+ P                 P     ++     K  V+W    +P  +    +   
Sbjct: 533 RLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMK--- 589

Query: 440 VQTWTEKDGEGSIRELIVNKGEST---TTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS 496
                E DG         ++G+ T   +TE+DK   ++K +  VLA       P + +  
Sbjct: 590 ----KEDDGLTIYGVAEKDQGDYTCVASTELDK--DSAKAYLTVLAI------PANRLRD 637

Query: 497 FVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERL 556
              P+  P   + LE   L   +  L W+  +  N  +  Y ++++  +  + G      
Sbjct: 638 L--PKERPDRPRDLELSDLAERSVKLTWIPGDDNNSPITDYIVQFEEDR-FQPGTWHNHS 694

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES----KYLF--YVPFKNPDNVEG 610
            Y   P   ++ L  L P   Y+  +      G    S    +Y      P  NP  V+G
Sbjct: 695 RY---PGNVNSALLSLSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTGVQG 751

Query: 611 RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT 670
            G+  NN+ I+WT +   +   P+ +Y + WRR +   +W  + V   R    V+ N P 
Sbjct: 752 AGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRH---VVWNTPI 808

Query: 671 FQPYEIKV 678
           + PYEIKV
Sbjct: 809 YVPYEIKV 816



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 146/643 (22%), Positives = 240/643 (37%), Gaps = 106/643 (16%)

Query: 15   ILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI 74
            +L N   + +       AP+ Q +       ++  +  L C F G+P+P   W K+G   
Sbjct: 435  LLANAFVSVLDVPPRILAPRNQLIK-----VIQYNRTRLDCPFFGSPIPTLRWFKNG--- 486

Query: 75   NPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV 130
               + +  GNY      SL +      DQG YTC  +N +G+ ++  + L V        
Sbjct: 487  -QGNMLDGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEA-QVRLEVKDPTRIVR 544

Query: 131  EPEFINAAEEETVTFECKASGLPEPE--IHWVHNGKPISQAPPNPRRKVGPNRITIENLR 188
             PE             C+    P  +  + W+ +  P+       R K   + +TI  + 
Sbjct: 545  GPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGN---RMKKEDDGLTIYGVA 601

Query: 189  KSDTGNYGCNATNSLGYVYKDVYV-------NVLAHAP-EITEAPKDEYTVD--GKTVVL 238
            + D G+Y C A+  L       Y+       N L   P E  + P+D    D   ++V L
Sbjct: 602  EKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDLPKERPDRPRDLELSDLAERSVKL 661

Query: 239  T--------------CRVFGAPKPEVNWIHNQKELTGG--------------RYTILETG 270
            T                 F   + +    HN     G               ++ ++   
Sbjct: 662  TWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHSRYPGNVNSALLSLSPYVNYQFRVIAVN 721

Query: 271  DLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN 330
            D+  +  +       T  AR ++      G+ T K +  IT  P +     G        
Sbjct: 722  DVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYG-------- 773

Query: 331  AVSDPSLKLSIVWLR----GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
                P+L+  + W R    GS   +    PR V  N                Y  + Q E
Sbjct: 774  ----PNLRYIVRWRRRDPRGSWYNETVKAPRHVVWNTPIYV----------PYEIKVQAE 819

Query: 387  LDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
             DF  A    T         P  AP++   I+V+++    ++W  V   +++G  + Y+ 
Sbjct: 820  NDFGRAPEPETYIGYSGEDYPKAAPTDVR-IRVLNSTAIALTWTRVHLDTIQGQLKEYRA 878

Query: 441  QTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
              W +     ++     R+ +   G+     V +  P S     ++  NG  +GP SE+ 
Sbjct: 879  YFWRDSSLLKNLWVSKKRQYVSFPGDRNRGIVSRLFPYSNYKLEMVVTNGRGDGPRSEVK 938

Query: 496  SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQS------VKGTKV 549
             F TPEGVP + + L        +  L+W  PE PNGVL GY ++YQ+      V G+K 
Sbjct: 939  EFPTPEGVPSSPRYLRIRQPNLESINLEWDHPEHPNGVLTGYNLRYQASCLSSPVNGSKT 998

Query: 550  G-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            G  L+E       P  T   +   +P ++YR  L   T+ GDG
Sbjct: 999  GRTLVENF----SPNQTRFTVQRTDPISRYRFFLRARTQVGDG 1037



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 89/222 (40%), Gaps = 37/222 (16%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELT------------G 261
           L   P IT+    +Y VD +  + + C   G P P  +W  N K                
Sbjct: 38  LPQPPTITKQSVKDYIVDPRDNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRS 97

Query: 262 GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP------- 314
           G   I   G  +  D      GEY CFARN  GTA     L+ K H  ++  P       
Sbjct: 98  GTLVIDFHGGGRPDDY----EGEYQCFARNDYGTA-----LSSKIHLQVSRSPLWPKEKV 148

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS-EPIDFESEPRFVQSND--YSLTVTKS 371
           +  EV+ G   + +CN        + I W+  S EPI  +      Q+ D  +S  + + 
Sbjct: 149 DVIEVDEGAPLSLQCNPPPGLPPPV-IFWMSSSMEPIHQDKRVSQGQNGDLYFSNVMLQD 207

Query: 372 SELDSGQYTCRAQTELDF-IEAQATLTVQVPLEAPSNFTLIQ 412
           ++ D   Y+C A+      I+ +   T++V  + P N T ++
Sbjct: 208 AQTD---YSCNARFHFTHTIQQKNPYTLKVKTKKPHNETSLR 246



 Score = 47.8 bits (112), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 124/319 (38%), Gaps = 59/319 (18%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSDT--GNY 195
           + +  EC+A G P P   W  NGK   +++ P  + RR+ G   I      + D   G Y
Sbjct: 58  DNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHGGGRPDDYEGEY 117

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNW-- 252
            C A N  G          ++ +P   +   D   VD G  + L C       P V +  
Sbjct: 118 QCFARNDYGTALSSKIHLQVSRSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPPPVIFWM 177

Query: 253 ------IHNQKELTGGRYTILETGDLKITDVAFADS-GEYTCFARN-------------- 291
                 IH  K ++ G     + GDL  ++V   D+  +Y+C AR               
Sbjct: 178 SSSMEPIHQDKRVSQG-----QNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTL 232

Query: 292 KLGTAQGSGSLTVKEHTH------ITDQPEDYEVEAGQSAT----------FRCNAVSDP 335
           K+ T +     +++ HT       +T+    +    G S++            C A   P
Sbjct: 233 KVKTKKPHNETSLRNHTDMYSARGVTETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVP 292

Query: 336 SLKLSIVWL-RGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +    I+W  +G E     +    +++ + +L ++  SE DSG+Y C A  ++  I    
Sbjct: 293 A--PDIMWYKKGGE---LPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTI 347

Query: 395 TLTVQVP---LEAPSNFTL 410
           ++ V+     L+ P N  L
Sbjct: 348 SVRVKAAPYWLDEPQNLIL 366


>gi|237858639|ref|NP_001004709.2| neurofascin isoform 3 precursor [Gallus gallus]
          Length = 1144

 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 133/375 (35%), Positives = 192/375 (51%), Gaps = 13/375 (3%)

Query: 37  YVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEF 96
           Y T   ++ LR   + L CI  G P P  +W K G  + P+ +    N+ K+L I +V  
Sbjct: 251 YGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGGEL-PAGKTKLENFNKALRISNVSE 309

Query: 97  SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE 156
            D G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P 
Sbjct: 310 EDSGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPQNLILAPGEDGRLVCRANGNPKPS 368

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           I W+ NG+PI  +PPNP R+V  + I   + +   +  Y CNA+N  GY+  + +V+VL 
Sbjct: 369 IQWLVNGEPIEGSPPNPSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLD 428

Query: 217 HAPEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDL 272
             P I  AP+++    +      L C  FG+P P + W  N +   L GG Y   E G L
Sbjct: 429 VPPRIL-APRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQGNMLDGGNYKAHENGSL 487

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV 332
           +++     D G YTC A N LG  +    L VK+ T I   PED  V+ G      C   
Sbjct: 488 EMSMARKEDQGIYTCVATNILGKVEAQVRLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVK 547

Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
            DP+LKL++ WL+   P+   +    ++  D  LT+   +E D G YTC A TELD   A
Sbjct: 548 HDPTLKLTVTWLKDDAPLYIGNR---MKKEDDGLTIYGVAEKDQGDYTCVASTELDKDSA 604

Query: 393 QATLTVQVPLEAPSN 407
           +A LTV   L  P+N
Sbjct: 605 KAYLTV---LAIPAN 616



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 153/655 (23%), Positives = 258/655 (39%), Gaps = 87/655 (13%)

Query: 73  PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGEAKSYSIDLSV----- 122
           PI+   R+SQG  G  L   +V   D Q  Y+C      ++ + +   Y++ +       
Sbjct: 183 PIHQDKRVSQGQNG-DLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTTRGVT 241

Query: 123 -----LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
                   PY T   + +    +  +  EC ASG+P P+I W   G    + P    +  
Sbjct: 242 ETTPSFMYPYGTSSSQMVLRGVD--LLLECIASGVPAPDIMWYKKG---GELPAGKTKLE 296

Query: 178 GPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTV 236
             N+ + I N+ + D+G Y C A+N +G +   + V V A AP   + P++     G+  
Sbjct: 297 NFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYWLDEPQNLILAPGEDG 355

Query: 237 VLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDVAFADSGEYTCFARN 291
            L CR  G PKP + W+ N + + G      R    +T  +   D     S  Y C A N
Sbjct: 356 RLVCRANGNPKPSIQWLVNGEPIEGSPPNPSREVAGDT--IVFRDTQIGSSAVYQCNASN 413

Query: 292 KLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID 351
           + G    +  ++V +       P +  ++  Q    R +     S   ++ W +  +   
Sbjct: 414 EHGYLLANAFVSVLDVPPRILAPRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQGNM 473

Query: 352 FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE-------- 403
            +        N  SL ++ + + D G YTC A   L  +EAQ  L V+ P          
Sbjct: 474 LDGGNYKAHENG-SLEMSMARKEDQGIYTCVATNILGKVEAQVRLEVKDPTRIVRGPEDQ 532

Query: 404 ------APSNFTLIQVIDAKKAVVSW-NPVSPQSLRGHFR----GYKVQTWTEKDGEGSI 452
                  P     ++     K  V+W    +P  +    +    G  +    EKD     
Sbjct: 533 VVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKEDDGLTIYGVAEKD----- 587

Query: 453 RELIVNKGEST---TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQS 509
                 +G+ T   +TE+DK   ++K +  VLA       P + +     P+  P   + 
Sbjct: 588 ------QGDYTCVASTELDK--DSAKAYLTVLAI------PANRLRDL--PKERPDRPRD 631

Query: 510 LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKL 569
           LE   L   +  L W+  +  N  +  Y ++++  +  + G       Y   P   ++ L
Sbjct: 632 LELSDLAERSVKLTWIPGDDNNSPITDYIVQFEEDR-FQPGTWHNHSRY---PGNVNSAL 687

Query: 570 AGLEPSTKYRIHLAGYTKAGDGAES----KYLF--YVPFKNPDNVEGRGSTPNNLVISWT 623
             L P   Y+  +      G    S    +Y      P  NP  V+G G+  NN+ I+WT
Sbjct: 688 LSLSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEITWT 747

Query: 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            +   +   P+ +Y + WRR +   +W  + V   R    V+ N P + PYEIKV
Sbjct: 748 PLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRH---VVWNTPIYVPYEIKV 799



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 148/572 (25%), Positives = 218/572 (38%), Gaps = 54/572 (9%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P   W  +G PI     NPS  ++    G +++ +  +      Y C  S
Sbjct: 357 LVCRANGNPKPSIQWLVNGEPIEGSPPNPSREVA----GDTIVFRDTQIGSSAVYQCNAS 412

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  +SVL  P   + P  + I   +      +C   G P P + W  NG+ 
Sbjct: 413 NEHGYLLANAF-VSVLDVPPRILAPRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQG 471

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
                 N +       + +   RK D G Y C ATN LG V   V + V      I   P
Sbjct: 472 NMLDGGNYKAHEN-GSLEMSMARKEDQGIYTCVATNILGKVEAQVRLEV-KDPTRIVRGP 529

Query: 226 KDEYTVDGKTVVLTCRVFGAP--KPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSG 283
           +D+    G    L CRV   P  K  V W+ +   L  G     E   L I  VA  D G
Sbjct: 530 EDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKEDDGLTIYGVAEKDQG 589

Query: 284 EYTCFARNKLGTAQGSGSLTVKE--HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +YTC A  +L        LTV       + D P++      +      + +++ S+KL+ 
Sbjct: 590 DYTCVASTELDKDSAKAYLTVLAIPANRLRDLPKE---RPDRPRDLELSDLAERSVKLT- 645

Query: 342 VWLRGSE---PI-----DFESEPRF---VQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
            W+ G +   PI      FE E RF      N        +S L S       Q  +  +
Sbjct: 646 -WIPGDDNNSPITDYIVQFE-EDRFQPGTWHNHSRYPGNVNSALLSLSPYVNYQFRVIAV 703

Query: 391 EAQATLTVQVPLEAPS--------NFTLIQVIDAKK--AVVSWNPVSPQSLRGHFRGYKV 440
               +    +P E           N T +Q    +K    ++W P++     G    Y V
Sbjct: 704 NDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRYIV 763

Query: 441 QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 500
           + W  +D  GS     V            +VP      +V A N     P  E     + 
Sbjct: 764 R-WRRRDPRGSWYNETVKAPRHVVWNTPIYVPYE---IKVQAENDFGRAPEPETYIGYSG 819

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVG-PLLERLPYI 559
           E +P + + L        +  L+W  PE PNGVL GY ++YQ+  G+K G  L+E     
Sbjct: 820 EDLPSSPRYLRIRQPNLESINLEWDHPEHPNGVLTGYNLRYQAFNGSKTGRTLVENF--- 876

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             P  T   +   +P ++YR  L   T+ GDG
Sbjct: 877 -SPNQTRFTVQRTDPISRYRFFLRARTQVGDG 907



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 121/302 (40%), Gaps = 42/302 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSDT--GNY 195
           + +  EC+A G P P   W  NGK   +++ P  + RR+ G   I      + D   G Y
Sbjct: 58  DNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHGGGRPDDYEGEY 117

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNW-- 252
            C A N  G          ++ +P   +   D   VD G  + L C       P V +  
Sbjct: 118 QCFARNDYGTALSSKIHLQVSRSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPPPVIFWM 177

Query: 253 ------IHNQKELTGGRYTILETGDLKITDVAFADSG-EYTCFARNKL-GTAQGSG--SL 302
                 IH  K ++ G     + GDL  ++V   D+  +Y+C AR     T Q     +L
Sbjct: 178 SSSMEPIHQDKRVSQG-----QNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTL 232

Query: 303 TVKEHTHITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWL-RGSEPID 351
            VK    +T+    +    G S++            C A   P+    I+W  +G E   
Sbjct: 233 KVKTTRGVTETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPA--PDIMWYKKGGE--- 287

Query: 352 FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNF 408
             +    +++ + +L ++  SE DSG+Y C A  ++  I    ++ V+     L+ P N 
Sbjct: 288 LPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPQNL 347

Query: 409 TL 410
            L
Sbjct: 348 IL 349



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 76/193 (39%), Gaps = 36/193 (18%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELT------------G 261
           L   P IT+    +Y VD +  + + C   G P P  +W  N K                
Sbjct: 38  LPQPPTITKQSVKDYIVDPRDNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRS 97

Query: 262 GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP------- 314
           G   I   G  +  D      GEY CFARN  GTA     L+ K H  ++  P       
Sbjct: 98  GTLVIDFHGGGRPDDY----EGEYQCFARNDYGTA-----LSSKIHLQVSRSPLWPKEKV 148

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS-EPIDFESEPRFVQSND--YSLTVTKS 371
           +  EV+ G   + +CN        + I W+  S EPI  +      Q+ D  +S  + + 
Sbjct: 149 DVIEVDEGAPLSLQCNPPPGLPPPV-IFWMSSSMEPIHQDKRVSQGQNGDLYFSNVMLQD 207

Query: 372 SELDSGQYTCRAQ 384
           ++ D   Y+C A+
Sbjct: 208 AQTD---YSCNAR 217


>gi|350588948|ref|XP_003482751.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Sus scrofa]
          Length = 1183

 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 140/392 (35%), Positives = 201/392 (51%), Gaps = 15/392 (3%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEF 96
           +RK+E  LR   + L CI  G P P   W K DG +PIN   R    N+ K+L I  V  
Sbjct: 272 SRKEE--LRGNVLSLECIAEGLPTPIIYWIKEDGTLPIN---RTFYRNFKKTLQIIQVTE 326

Query: 97  SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           +D G+Y C   N +G A  ++I ++V AAPY+ + P+ +  +  E  T  C+A+G P+P 
Sbjct: 327 ADSGNYQCIAKNTLG-AIHHTISVTVKAAPYWIIAPQNLVLSPGEDGTLICRANGNPKPR 385

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           I W+ NG PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA
Sbjct: 386 ISWLSNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSSVYQCNASNEYGYLLANAFVNVLA 445

Query: 217 HAPEITEAPKDEYTVDG-KTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLK 273
             P I  +    Y V   +   L C  FG+P P + W    K   L    Y + E G L+
Sbjct: 446 EPPRILTSANTLYQVIADRPAFLDCAFFGSPLPSIEWFKGAKGSALREDIYILHENGTLE 505

Query: 274 ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVS 333
           I       +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G + +F C    
Sbjct: 506 IPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQPEYAVVQRGSTVSFECKVKH 565

Query: 334 DPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393
           D +L L++ WL+     +  S+ RF    D+ L V   ++ D G YTC A T LD + A 
Sbjct: 566 DHTLILTVTWLKDHS--ELPSDGRFTVDKDH-LVVADVNDDDGGTYTCVANTTLDNVSAS 622

Query: 394 ATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           A L+V      P +  L   +D +   +SW P
Sbjct: 623 AVLSVVDVPNPPFDLELTDQLD-RSVQLSWTP 653



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 147/581 (25%), Positives = 242/581 (41%), Gaps = 55/581 (9%)

Query: 124 AAPYFTVEPEFI----NAAEEE-----TVTFECKASGLPEPEIHWVHNGK--PISQAPPN 172
           A P+    P F+    NA+ +E      ++ EC A GLP P I+W+      PI++    
Sbjct: 254 AKPHRERPPTFLTPEGNASRKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYR 313

Query: 173 PRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD 232
             +K     + I  + ++D+GNY C A N+LG ++  + V V A AP    AP++     
Sbjct: 314 NFKKT----LQIIQVTEADSGNYQCIAKNTLGAIHHTISVTVKA-APYWIIAPQNLVLSP 368

Query: 233 GKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI-TDVAFADSGEYTCFA 289
           G+   L CR  G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A
Sbjct: 369 GEDGTLICRANGNPKPRISWLSNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSSVYQCNA 428

Query: 290 RNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS 347
            N+ G    +  + V       +T     Y+V A + A   C     P    SI W +G+
Sbjct: 429 SNEYGYLLANAFVNVLAEPPRILTSANTLYQVIADRPAFLDCAFFGSP--LPSIEWFKGA 486

Query: 348 EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEA 404
           +      +   +  N  +L +  + +  +G YTC A+ +L   + +  L ++ P   ++ 
Sbjct: 487 KGSALREDIYILHENG-TLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQ 545

Query: 405 PSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE-GSIRELIVNKGEST 463
           P  + ++Q    + + VS+       ++         TW +   E  S     V+K    
Sbjct: 546 PE-YAVVQ----RGSTVSFE----CKVKHDHTLILTVTWLKDHSELPSDGRFTVDKDHLV 596

Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLK 523
             +V+            +A     N   S ++S V    VP     LE       +  L 
Sbjct: 597 VADVND---DDGGTYTCVANTTLDNVSASAVLSVV---DVPNPPFDLELTDQLDRSVQLS 650

Query: 524 WVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
           W   +  N  +  + I+Y+ V   + G    +       TT   KL+   P   Y   + 
Sbjct: 651 WTPGDDNNSPITKFIIEYEDVMH-EAGLWHHQTEVPGTQTTAQLKLS---PYVNYAFRVM 706

Query: 584 GYTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKY 637
                G      A  +YL     P KNP  VEG GS P+NLVI+W  +   E N P  +Y
Sbjct: 707 AVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLSGFESNGPGLQY 766

Query: 638 RIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           ++ WR+ +  + W    V+    S+ +++  PTF PY +KV
Sbjct: 767 KVSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLVKV 805



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 142/580 (24%), Positives = 233/580 (40%), Gaps = 63/580 (10%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
            L C F G+PLP   W K        + I   +   +L I   +    G+YTC   N +G 
Sbjct: 468  LDCAFFGSPLPSIEWFKGAKGSALREDIYILHENGTLEIPVAQKDSTGTYTCVARNKLGM 527

Query: 113  AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPN 172
            AK+  + L +        +PE+       TV+FECK        I  V   K  S+ P +
Sbjct: 528  AKN-EVHLEIKDPTRIIKQPEYAVVQRGSTVSFECKVKH-DHTLILTVTWLKDHSELPSD 585

Query: 173  PRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV---------------LAH 217
             R  V  + + + ++   D G Y C A  +L  V     ++V               L  
Sbjct: 586  GRFTVDKDHLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVDVPNPPFDLELTDQLDR 645

Query: 218  APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITD- 276
            + +++  P D+        ++    +     E    H+Q E+ G +     T  LK++  
Sbjct: 646  SVQLSWTPGDDNNSPITKFIIE---YEDVMHEAGLWHHQTEVPGTQ----TTAQLKLSPY 698

Query: 277  VAFADSGEYTCFARNKLGTAQGSGS----LTVKEHTH--------ITDQPEDYEVEAGQS 324
            V +A    +   A N LG +  S +    LT              +  +P++  +     
Sbjct: 699  VNYA----FRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPL 754

Query: 325  ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
            + F  N    P L+  + W +     ++ S    V +N     V+ +          +A 
Sbjct: 755  SGFESNG---PGLQYKVSWRQKDGDDEWTS---VVVANVSKYIVSGTPTFVPYLVKVQAL 808

Query: 385  TELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
             ++ F    A +       +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++
Sbjct: 809  NDVGFAPEPAVVMGHSGEDLPMVAPGNVR-VSVVNSTLAEVHWDPVPLKSIRGHLQGYRI 867

Query: 441  QTWTEKDGEGSIRELIVNK-----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
              W  +      R  I  K     G  T   +    P S     V   NG   GP S   
Sbjct: 868  YYWKAQSSSNRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDR 927

Query: 496  SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE 554
            +F TPEGVP    SL+ +     +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++
Sbjct: 928  AFHTPEGVPSAPSSLKIVNPTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLID 987

Query: 555  -RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
             ++P       T   L  L  ST+Y+ +    T AG G++
Sbjct: 988  LKIPA----NKTRWTLKNLNFSTRYKFYFYAQTAAGSGSQ 1023



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 145/606 (23%), Positives = 233/606 (38%), Gaps = 73/606 (12%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 374 LICRANGNPKPRISWLSNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSSVYQCNAS 429

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T          +     +C   G P P I W    K 
Sbjct: 430 NEYGYLLANAF-VNVLAEPPRILTSANTLYQVIADRPAFLDCAFFGSPLPSIEWFKGAK- 487

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 488 -GSALREDIYILHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQ 545

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P+      G TV   C+V         V W+ +  EL + GR+T+ +   L + DV   D
Sbjct: 546 PEYAVVQRGSTVSFECKVKHDHTLILTVTWLKDHSELPSDGRFTV-DKDHLVVADVNDDD 604

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G YTC A   L     S  L+V +   + + P D E+              D S++LS 
Sbjct: 605 GGTYTCVANTTLDNVSASAVLSVVD---VPNPPFDLELTDQL----------DRSVQLS- 650

Query: 342 VWLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQA 394
            W  G +   PI     E E    ++  +           + Q          F + A  
Sbjct: 651 -WTPGDDNNSPITKFIIEYEDVMHEAGLWHHQTEVPGTQTTAQLKLSPYVNYAFRVMAVN 709

Query: 395 TLTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQ 441
           +L   +P EA   +           T ++ + ++    V++W P+S     G    YKV 
Sbjct: 710 SLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLSGFESNGPGLQYKV- 768

Query: 442 TWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 500
           +W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + 
Sbjct: 769 SWRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LVKVQALNDVGFAPEPAVVMGHSG 825

Query: 501 EGVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLER 555
           E +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+
Sbjct: 826 EDLPMVAPGNVRVSVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSSNRNRRHIEK 885

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGST 614
                  + T   L GLEP + Y +++      G+G A     F+ P       EG  S 
Sbjct: 886 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRAFHTP-------EGVPSA 938

Query: 615 PNNLVI 620
           P++L I
Sbjct: 939 PSSLKI 944



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 140/344 (40%), Gaps = 57/344 (16%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNGKPIS-QAP 170
           LS L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  LSALEVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKD 86

Query: 171 PNPRRKVGPNRITIENLR--KSDT--GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
           P    K G   +TI  +   K++T  G Y C A N  G    +  V   + +P  T+   
Sbjct: 87  PLVTMKTGSGTLTINIMSDGKAETYEGVYQCTARNERGAAISNNIVIRSSRSPLWTKEKL 146

Query: 227 DEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKITDVAFADS 282
           +  T+  G+++VL CR   G P P + W+ N  Q+     R +    GDL  ++V   D+
Sbjct: 147 EPMTLRSGQSLVLPCRPPMGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDA 206

Query: 283 GE-YTCFAR-NKLGTAQGSGSLTVKEHT----------HITD-----------QPEDY-- 317
            E Y C+AR N   T Q    ++VK  +          +++D           +P  +  
Sbjct: 207 REDYICYARFNHTQTIQQKQPISVKVTSVDELNDTIAANLSDTEFYGAKPHRERPPTFLT 266

Query: 318 -EVEAGQSATFRCNAVSDPSLKLS-----IVWLR--GSEPIDFESEPRFVQSNDYSLTVT 369
            E  A +    R N +S   +        I W++  G+ PI+      F ++   +L + 
Sbjct: 267 PEGNASRKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINRT----FYRNFKKTLQII 322

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
           + +E DSG Y C A+  L  I    ++TV+     + AP N  L
Sbjct: 323 QVTEADSGNYQCIAKNTLGAIHHTISVTVKAAPYWIIAPQNLVL 366


>gi|426227609|ref|XP_004007910.1| PREDICTED: neuronal cell adhesion molecule isoform 5 [Ovis aries]
          Length = 1211

 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 136/373 (36%), Positives = 195/373 (52%), Gaps = 14/373 (3%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEF 96
           +RK+E  LR   + L CI  G P P   W K DG +PIN   R    N+ K+L I  V  
Sbjct: 278 SRKEE--LRGNVLSLECIAEGLPTPIIYWIKEDGTLPIN---RTFYRNFKKTLQIVQVTE 332

Query: 97  SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           +D G+Y C   N +G A  ++I ++V AAPY+ + P+ +  + EE  T  C+A+G P+P 
Sbjct: 333 ADSGNYQCIAKNSLG-AIHHTISVTVKAAPYWIIAPQNLVLSPEEDGTLICRANGNPKPR 391

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           I W+ NG PI  AP +P RK+  + I    +++  +  Y CNA+N  GY+  + +VNVLA
Sbjct: 392 ISWLSNGVPIEIAPDDPSRKIDGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLA 451

Query: 217 HAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLK 273
             P I  +    Y V   +  +L C  FG+P P + W  + K   L    Y + E G L+
Sbjct: 452 EPPRILTSANTLYQVIANRPALLDCAFFGSPLPAIEWFKDAKGSALREDIYVLHENGTLE 511

Query: 274 ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVS 333
           I       +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G + +F C    
Sbjct: 512 IPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDPTRIIKQPEYAVVQRGSTVSFECKVKH 571

Query: 334 DPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393
           D +L  ++ WL+     +  S+ RF    DY L V   ++ D G YTC A T LD + A 
Sbjct: 572 DHTLIPTVTWLKDHG--ELPSDGRFTVDKDY-LVVADVNDDDGGTYTCVANTTLDNVSAS 628

Query: 394 ATLTVQVPLEAPS 406
           A L+V  P   P+
Sbjct: 629 AVLSVVAPTPTPA 641



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 141/560 (25%), Positives = 230/560 (41%), Gaps = 50/560 (8%)

Query: 143 VTFECKASGLPEPEIHWVHNGK--PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
           ++ EC A GLP P I+W+      PI++      +K     + I  + ++D+GNY C A 
Sbjct: 288 LSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKKT----LQIVQVTEADSGNYQCIAK 343

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QKE 258
           NSLG ++  + V V A AP    AP++      +   L CR  G PKP ++W+ N    E
Sbjct: 344 NSLGAIHHTISVTVKA-APYWIIAPQNLVLSPEEDGTLICRANGNPKPRISWLSNGVPIE 402

Query: 259 LTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPE 315
           +     +    GD  I + V    S  Y C A N+ G    +  + V       +T    
Sbjct: 403 IAPDDPSRKIDGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTSANT 462

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
            Y+V A + A   C     P    +I W + ++      E  +V   + +L +  + +  
Sbjct: 463 LYQVIANRPALLDCAFFGSP--LPAIEWFKDAKGSALR-EDIYVLHENGTLEIPVAQKDS 519

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           +G YTC A+ +L   +    L ++ P   ++ P  + ++Q    + + VS+       ++
Sbjct: 520 TGTYTCVARNKLGMAKNDVHLEIKDPTRIIKQPE-YAVVQ----RGSTVSFE----CKVK 570

Query: 433 GHFRGYKVQTWTEKDGE-GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                    TW +  GE  S     V+K      +V+            +A     N   
Sbjct: 571 HDHTLIPTVTWLKDHGELPSDGRFTVDKDYLVVADVND---DDGGTYTCVANTTLDNVSA 627

Query: 492 SEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
           S ++S V P   P  +  +   P           +  L W   +  N  +  + I+Y+  
Sbjct: 628 SAVLSVVAPTPTPAPIYDVPNPPFDLELTDQLDRSVQLSWTPGDDNNSPITKFIIEYEDA 687

Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV 600
                 P L         T T+A+L  L P   Y   +      G      A  +YL   
Sbjct: 688 MHE---PGLWHHQAEVPGTQTTAQLK-LSPYVNYSFRVMAENNLGRSLPSEASEQYLTKA 743

Query: 601 --PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDW 658
             P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W    V+  
Sbjct: 744 AEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS--VVVA 801

Query: 659 RQSELVLANQPTFQPYEIKV 678
             S+ +++  PTF PY IKV
Sbjct: 802 NVSKYIVSGTPTFVPYLIKV 821



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 844  LPMVAPGNVH-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRNRRHIEKK 902

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 903  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDKVFNTPEGVPSAPSSLKIVN 962

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 963  PTLDSLTLEWEPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWILKNL 1018

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1019 NISTRYKFYFYAQTAAGSGSQ 1039



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 146/608 (24%), Positives = 227/608 (37%), Gaps = 67/608 (11%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I   V+      Y C  S
Sbjct: 380 LICRANGNPKPRISWLSNGVPIEIAPDDPSRKID----GDTIIFSKVQERSSAVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T                +C   G P P I W  + K 
Sbjct: 436 NEYGYLLANAF-VNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPLPAIEWFKDAK- 493

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    DV++ +      I + 
Sbjct: 494 -GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPTRIIKQ 551

Query: 225 PKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P+      G TV   C+V       P V W+ +  EL + GR+T+ +   L + DV   D
Sbjct: 552 PEYAVVQRGSTVSFECKVKHDHTLIPTVTWLKDHGELPSDGRFTV-DKDYLVVADVNDDD 610

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G YTC A   L     S  L+V     +   P    +    +  F           + +
Sbjct: 611 GGTYTCVANTTLDNVSASAVLSV-----VAPTPTPAPIYDVPNPPFDLELTDQLDRSVQL 665

Query: 342 VWLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQA 394
            W  G +   PI     E E    +   +           + Q          F + A+ 
Sbjct: 666 SWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQAEVPGTQTTAQLKLSPYVNYSFRVMAEN 725

Query: 395 TLTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQ 441
            L   +P EA   +           T ++ + ++    V++W P++     G    YKV 
Sbjct: 726 NLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV- 784

Query: 442 TWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFV- 498
           +W +KDG+     ++V N  +   +    FVP      +V A N A   P P+ ++    
Sbjct: 785 SWRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDAGFAPEPAAVMGHSG 841

Query: 499 --TPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKG--TKVGPL 552
              P   PG V       + S+   + W  V  +   G L GY+I Y   +   T+    
Sbjct: 842 EDLPMVAPGNVH---VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRNRRH 898

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRG 612
           +E+       + T   L GLEP + Y +++      G+G  S      P K  +  EG  
Sbjct: 899 IEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPAS------PDKVFNTPEGVP 952

Query: 613 STPNNLVI 620
           S P++L I
Sbjct: 953 SAPSSLKI 960



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 124/315 (39%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   +TI  +   K++T  G Y
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGSGTLTINIMSEGKAETYEGVY 121

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVN-WI 253
            C A N  G    +  V   + +P  T+   +  T+ +G+++VL CR      P +  W+
Sbjct: 122 QCTARNERGAAISNNIVIRPSRSPLWTKEKLEPITLRNGQSLVLPCRPPIGLPPPIIFWM 181

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVKE--- 306
            N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK    
Sbjct: 182 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISV 241

Query: 307 ---HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS----------------------- 340
              +  I     D E    +S   R      P    S                       
Sbjct: 242 DELNDTIAANLSDTEFYGAKSHRQRPPTFLTPDGNTSRKEELRGNVLSLECIAEGLPTPI 301

Query: 341 IVWLR--GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W++  G+ PI+      F ++   +L + + +E DSG Y C A+  L  I    ++TV
Sbjct: 302 IYWIKEDGTLPINR----TFYRNFKKTLQIVQVTEADSGNYQCIAKNSLGAIHHTISVTV 357

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 358 KAAPYWIIAPQNLVL 372


>gi|225637535|ref|NP_001139503.1| neuronal cell adhesion molecule isoform 2 precursor [Mus musculus]
          Length = 1186

 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 163/513 (31%), Positives = 239/513 (46%), Gaps = 26/513 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W K DG  + P++R    N+ K+L I HV  +D G+Y C
Sbjct: 277 LRGNVLSLECIAEGLPTPIIYWIKEDG--MLPANRTFYRNFKKTLQITHVSEADSGNYQC 334

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I ++V AAPY+ V P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 335 IAKNALG-AVHHTISVTVKAAPYWIVAPQNLVLSPGENGTLICRANGNPKPRISWLTNGV 393

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  A  +P RK+  + I   N+++S +  Y CNA+N  GY+  + +VNVLA  P I  +
Sbjct: 394 PIEIALDDPSRKIDGDTIIFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILTS 453

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + + G L+I       
Sbjct: 454 ANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALHEDIYVLHDNGTLEIPVAQKDS 513

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L  +I
Sbjct: 514 TGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQPEYAVVQRGSKVSFECRVKHDHTLIPTI 573

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  ++ RF    D+ L V+   + D G YTC A T LD   A A L V   
Sbjct: 574 MWLKDNG--ELPNDERFSTDKDH-LVVSDVKDDDGGTYTCTANTTLDSASASAVLRVVDV 630

Query: 402 LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGE 461
              P +  L   +D K   ++W P    +       + ++        G  R      G 
Sbjct: 631 PNPPFDLELTNQLD-KSVQLTWTPGDDNN--SPITKFIIEYEDAMHDAGLWRHQAEVSGT 687

Query: 462 STTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPGTVQSLEAIPLG 516
            TT ++ K  P      RV+A N      PSE     +     P+  P  V+ L   P  
Sbjct: 688 QTTAQL-KLSPYVNYSFRVMAENSIGRSMPSEASEQYLTKAAEPDQNPMAVEGLGTEP-- 744

Query: 517 SSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
                + W KP    Q NG  + YK+ ++   G
Sbjct: 745 -DNLVITW-KPLNGFQSNGPGLQYKVSWRQKDG 775



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 142/557 (25%), Positives = 229/557 (41%), Gaps = 54/557 (9%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W+   K     P N  R    N    + I ++ ++D+GNY C A
Sbjct: 282 LSLECIAEGLPTPIIYWI---KEDGMLPAN--RTFYRNFKKTLQITHVSEADSGNYQCIA 336

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK-- 257
            N+LG V+  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 337 KNALGAVHHTISVTVKA-APYWIVAPQNLVLSPGENGTLICRANGNPKPRISWLTNGVPI 395

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQP 314
           E+     +    GD  I ++V  + S  Y C A NK G    +  + V       +T   
Sbjct: 396 EIALDDPSRKIDGDTIIFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILTSAN 455

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V  ++ +L +  + + 
Sbjct: 456 TLYQVIANRPALLDCAFFGSP--MPTIEWFKGTKGSALH-EDIYVLHDNGTLEIPVAQKD 512

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
            +G YTC A+ +L   + +  L ++ P           +   + AVV          R  
Sbjct: 513 STGTYTCVARNKLGMAKNEVHLEIKDPTRI--------IKQPEYAVVQRGSKVSFECRVK 564

Query: 435 FRGYKVQT--WTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN---- 488
                + T  W + +GE       +   E  +T+ D  V +         +    N    
Sbjct: 565 HDHTLIPTIMWLKDNGE-------LPNDERFSTDKDHLVVSDVKDDDGGTYTCTANTTLD 617

Query: 489 -GPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
               S ++  V    VP     LE       +  L W   +  N  +  + I+Y+     
Sbjct: 618 SASASAVLRVV---DVPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYED--AM 672

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV--P 601
               L      +S  T T+A+L  L P   Y   +      G      A  +YL     P
Sbjct: 673 HDAGLWRHQAEVSG-TQTTAQLK-LSPYVNYSFRVMAENSIGRSMPSEASEQYLTKAAEP 730

Query: 602 FKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQS 661
            +NP  VEG G+ P+NLVI+W  +   + N P  +Y++ WR+ +  + W    V+    S
Sbjct: 731 DQNPMAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTS--VVVANVS 788

Query: 662 ELVLANQPTFQPYEIKV 678
           + +++  PTF PY IKV
Sbjct: 789 KYIVSGTPTFVPYLIKV 805



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV P+S+RGH +GY++  W  +      R  I  K
Sbjct: 828  LPMVAPGNVR-VSVVNSTLAEVHWDPVPPKSVRGHLQGYRIYYWKTQSSSKRNRRHIEKK 886

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 887  ILTFQGTKTHGMLPGLQPYSHYALNVRVVNGKGEGPASTDRGFHTPEGVPSAPSSLKIVN 946

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y ++YQ +  T ++GPL++ ++P       T   L  L
Sbjct: 947  PTLDSLTLEWDPPSHPNGILTEYILQYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 1002

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T  G G++
Sbjct: 1003 NFSTRYKFYFYAQTSVGPGSQ 1023



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 145/607 (23%), Positives = 229/607 (37%), Gaps = 75/607 (12%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+ S    Y C  S
Sbjct: 374 LICRANGNPKPRISWLTNGVPIEIALDDPSRKID----GDTIIFSNVQESSSAVYQCNAS 429

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T                +C   G P P I W   G  
Sbjct: 430 NKYGYLLANAF-VNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPMPTIEWF-KGTK 487

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
            S    +         + I   +K  TG Y C A N LG    +V++ +      I + P
Sbjct: 488 GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQP 546

Query: 226 KDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRYTILETGDLKITDVAFADSG 283
           +      G  V   CRV       P + W+ +  EL        +   L ++DV   D G
Sbjct: 547 EYAVVQRGSKVSFECRVKHDHTLIPTIMWLKDNGELPNDERFSTDKDHLVVSDVKDDDGG 606

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVW 343
            YTC A   L +A  S  L V +   + + P D E+          N + D S++L+  W
Sbjct: 607 TYTCTANTTLDSASASAVLRVVD---VPNPPFDLEL---------TNQL-DKSVQLT--W 651

Query: 344 LRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQATL 396
             G +   PI     E E     +  +      S    + Q          F + A+ ++
Sbjct: 652 TPGDDNNSPITKFIIEYEDAMHDAGLWRHQAEVSGTQTTAQLKLSPYVNYSFRVMAENSI 711

Query: 397 TVQVPLEAPSNFTLIQV-------------IDAKKAVVSWNPVSPQSLRGHFRGYKVQTW 443
              +P EA   +                   +    V++W P++     G    YKV +W
Sbjct: 712 GRSMPSEASEQYLTKAAEPDQNPMAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKV-SW 770

Query: 444 TEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFV--- 498
            +KDG+     ++V N  +   +    FVP      +V A N     P P+ ++      
Sbjct: 771 RQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAAVMGHSGED 827

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLE 554
            P   PG V+      + S+   + W  V P+   G L GY+I Y   + +  +    +E
Sbjct: 828 LPMVAPGNVR---VSVVNSTLAEVHWDPVPPKSVRGHLQGYRIYYWKTQSSSKRNRRHIE 884

Query: 555 RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGS 613
           +       T T   L GL+P + Y +++      G+G A +   F+ P       EG  S
Sbjct: 885 KKILTFQGTKTHGMLPGLQPYSHYALNVRVVNGKGEGPASTDRGFHTP-------EGVPS 937

Query: 614 TPNNLVI 620
            P++L I
Sbjct: 938 APSSLKI 944



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 128/344 (37%), Gaps = 57/344 (16%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNGKPIS-QAP 170
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  ISALDVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKD 86

Query: 171 PNPRRKVGPNRITIENLR--KSDT--GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
           P    K G   + I  +   K++T  G Y C A N  G    +  V   + +P  T+   
Sbjct: 87  PLVTMKPGSGTLVINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKERL 146

Query: 227 DEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKITDVAFADS 282
           +   + +G+++VL CR   G P   + W+ N  Q+     R +    GDL  ++V   D+
Sbjct: 147 EPIVLQNGQSLVLPCRPPIGLPPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDT 206

Query: 283 GE-YTCFAR----------------------------NKLGTAQGSGSLTVKEHTHITDQ 313
            E Y C+AR                              L   +  G+ + KE       
Sbjct: 207 REDYICYARFNHTQTIQQKQPISLKVISVDELNDTIAANLSDTEFYGAKSSKERPPTFLT 266

Query: 314 PEDYEVEA----GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
           PE  E       G   +  C A   P+    I W++  E     +   F ++   +L +T
Sbjct: 267 PEGNESHKEELRGNVLSLECIAEGLPT--PIIYWIK--EDGMLPANRTFYRNFKKTLQIT 322

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             SE DSG Y C A+  L  +    ++TV+     + AP N  L
Sbjct: 323 HVSEADSGNYQCIAKNALGAVHHTISVTVKAAPYWIVAPQNLVL 366


>gi|426227605|ref|XP_004007908.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Ovis aries]
          Length = 1256

 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 141/402 (35%), Positives = 204/402 (50%), Gaps = 25/402 (6%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEF 96
           +RK+E  LR   + L CI  G P P   W K DG +PIN   R    N+ K+L I  V  
Sbjct: 272 SRKEE--LRGNVLSLECIAEGLPTPIIYWIKEDGTLPIN---RTFYRNFKKTLQIVQVTE 326

Query: 97  SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           +D G+Y C   N +G A  ++I ++V AAPY+ + P+ +  + EE  T  C+A+G P+P 
Sbjct: 327 ADSGNYQCIAKNSLG-AIHHTISVTVKAAPYWIIAPQNLVLSPEEDGTLICRANGNPKPR 385

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           I W+ NG PI  AP +P RK+  + I    +++  +  Y CNA+N  GY+  + +VNVLA
Sbjct: 386 ISWLSNGVPIEIAPDDPSRKIDGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLA 445

Query: 217 HAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLK 273
             P I  +    Y V   +  +L C  FG+P P + W  + K   L    Y + E G L+
Sbjct: 446 EPPRILTSANTLYQVIANRPALLDCAFFGSPLPAIEWFKDAKGSALREDIYVLHENGTLE 505

Query: 274 ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVS 333
           I       +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G + +F C    
Sbjct: 506 IPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDPTRIIKQPEYAVVQRGSTVSFECKVKH 565

Query: 334 DPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393
           D +L  ++ WL+     +  S+ RF    DY L V   ++ D G YTC A T LD + A 
Sbjct: 566 DHTLIPTVTWLKDHG--ELPSDGRFTVDKDY-LVVADVNDDDGGTYTCVANTTLDNVSAS 622

Query: 394 ATLTVQVPLEAPS----------NFTLIQVIDAKKAVVSWNP 425
           A L+V  P   P+          +  L   +D +   +SW P
Sbjct: 623 AVLSVVAPTPTPAPIYDVPNPPFDLELTDQLD-RSVQLSWTP 663



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 141/560 (25%), Positives = 230/560 (41%), Gaps = 50/560 (8%)

Query: 143 VTFECKASGLPEPEIHWVHNGK--PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
           ++ EC A GLP P I+W+      PI++      +K     + I  + ++D+GNY C A 
Sbjct: 282 LSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKKT----LQIVQVTEADSGNYQCIAK 337

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QKE 258
           NSLG ++  + V V A AP    AP++      +   L CR  G PKP ++W+ N    E
Sbjct: 338 NSLGAIHHTISVTVKA-APYWIIAPQNLVLSPEEDGTLICRANGNPKPRISWLSNGVPIE 396

Query: 259 LTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPE 315
           +     +    GD  I + V    S  Y C A N+ G    +  + V       +T    
Sbjct: 397 IAPDDPSRKIDGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTSANT 456

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
            Y+V A + A   C     P    +I W + ++      E  +V   + +L +  + +  
Sbjct: 457 LYQVIANRPALLDCAFFGSP--LPAIEWFKDAKGSALR-EDIYVLHENGTLEIPVAQKDS 513

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           +G YTC A+ +L   +    L ++ P   ++ P  + ++Q    + + VS+       ++
Sbjct: 514 TGTYTCVARNKLGMAKNDVHLEIKDPTRIIKQPE-YAVVQ----RGSTVSFE----CKVK 564

Query: 433 GHFRGYKVQTWTEKDGE-GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                    TW +  GE  S     V+K      +V+            +A     N   
Sbjct: 565 HDHTLIPTVTWLKDHGELPSDGRFTVDKDYLVVADVND---DDGGTYTCVANTTLDNVSA 621

Query: 492 SEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
           S ++S V P   P  +  +   P           +  L W   +  N  +  + I+Y+  
Sbjct: 622 SAVLSVVAPTPTPAPIYDVPNPPFDLELTDQLDRSVQLSWTPGDDNNSPITKFIIEYEDA 681

Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV 600
                 P L         T T+A+L  L P   Y   +      G      A  +YL   
Sbjct: 682 MHE---PGLWHHQAEVPGTQTTAQLK-LSPYVNYSFRVMAENNLGRSLPSEASEQYLTKA 737

Query: 601 --PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDW 658
             P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W    V+  
Sbjct: 738 AEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS--VVVA 795

Query: 659 RQSELVLANQPTFQPYEIKV 678
             S+ +++  PTF PY IKV
Sbjct: 796 NVSKYIVSGTPTFVPYLIKV 815



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 838  LPMVAPGNVH-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRNRRHIEKK 896

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 897  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDKVFNTPEGVPSAPSSLKIVN 956

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 957  PTLDSLTLEWEPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWILKNL 1012

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1013 NISTRYKFYFYAQTAAGSGSQ 1033



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 146/608 (24%), Positives = 227/608 (37%), Gaps = 67/608 (11%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I   V+      Y C  S
Sbjct: 374 LICRANGNPKPRISWLSNGVPIEIAPDDPSRKID----GDTIIFSKVQERSSAVYQCNAS 429

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T                +C   G P P I W  + K 
Sbjct: 430 NEYGYLLANAF-VNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPLPAIEWFKDAK- 487

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    DV++ +      I + 
Sbjct: 488 -GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPTRIIKQ 545

Query: 225 PKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P+      G TV   C+V       P V W+ +  EL + GR+T+ +   L + DV   D
Sbjct: 546 PEYAVVQRGSTVSFECKVKHDHTLIPTVTWLKDHGELPSDGRFTV-DKDYLVVADVNDDD 604

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G YTC A   L     S  L+V     +   P    +    +  F           + +
Sbjct: 605 GGTYTCVANTTLDNVSASAVLSV-----VAPTPTPAPIYDVPNPPFDLELTDQLDRSVQL 659

Query: 342 VWLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQA 394
            W  G +   PI     E E    +   +           + Q          F + A+ 
Sbjct: 660 SWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQAEVPGTQTTAQLKLSPYVNYSFRVMAEN 719

Query: 395 TLTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQ 441
            L   +P EA   +           T ++ + ++    V++W P++     G    YKV 
Sbjct: 720 NLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV- 778

Query: 442 TWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFV- 498
           +W +KDG+     ++V N  +   +    FVP      +V A N A   P P+ ++    
Sbjct: 779 SWRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDAGFAPEPAAVMGHSG 835

Query: 499 --TPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKG--TKVGPL 552
              P   PG V       + S+   + W  V  +   G L GY+I Y   +   T+    
Sbjct: 836 EDLPMVAPGNVH---VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRNRRH 892

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRG 612
           +E+       + T   L GLEP + Y +++      G+G  S      P K  +  EG  
Sbjct: 893 IEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPAS------PDKVFNTPEGVP 946

Query: 613 STPNNLVI 620
           S P++L I
Sbjct: 947 SAPSSLKI 954



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 132/344 (38%), Gaps = 57/344 (16%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNGKPIS-QAP 170
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  ISALEVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKD 86

Query: 171 PNPRRKVGPNRITIENLR--KSDT--GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
           P    K G   +TI  +   K++T  G Y C A N  G    +  V   + +P  T+   
Sbjct: 87  PLVTMKPGSGTLTINIMSEGKAETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKL 146

Query: 227 DEYTV-DGKTVVLTCRVFGAPKPEVN-WIHN--QKELTGGRYTILETGDLKITDVAFADS 282
           +  T+ +G+++VL CR      P +  W+ N  Q+     R +    GDL  ++V   D+
Sbjct: 147 EPITLRNGQSLVLPCRPPIGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDT 206

Query: 283 GE-YTCFAR-NKLGTAQGSGSLTVKE------HTHITDQPEDYEVEAGQSATFRCNAVSD 334
            E Y C+AR N   T Q    ++VK       +  I     D E    +S   R      
Sbjct: 207 REDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFYGAKSHRQRPPTFLT 266

Query: 335 PSLKLS-----------------------IVWLR--GSEPIDFESEPRFVQSNDYSLTVT 369
           P    S                       I W++  G+ PI+      F ++   +L + 
Sbjct: 267 PDGNTSRKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINR----TFYRNFKKTLQIV 322

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
           + +E DSG Y C A+  L  I    ++TV+     + AP N  L
Sbjct: 323 QVTEADSGNYQCIAKNSLGAIHHTISVTVKAAPYWIIAPQNLVL 366


>gi|237858652|ref|NP_001153796.1| neurofascin isoform 8 precursor [Gallus gallus]
          Length = 1064

 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 133/375 (35%), Positives = 192/375 (51%), Gaps = 13/375 (3%)

Query: 37  YVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEF 96
           Y T   ++ LR   + L CI  G P P  +W K G  + P+ +    N+ K+L I +V  
Sbjct: 251 YGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGGEL-PAGKTKLENFNKALRISNVSE 309

Query: 97  SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE 156
            D G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P 
Sbjct: 310 EDSGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPQNLILAPGEDGRLVCRANGNPKPS 368

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           I W+ NG+PI  +PPNP R+V  + I   + +   +  Y CNA+N  GY+  + +V+VL 
Sbjct: 369 IQWLVNGEPIEGSPPNPSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLD 428

Query: 217 HAPEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDL 272
             P I  AP+++    +      L C  FG+P P + W  N +   L GG Y   E G L
Sbjct: 429 VPPRIL-APRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQGNMLDGGNYKAHENGSL 487

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV 332
           +++     D G YTC A N LG  +    L VK+ T I   PED  V+ G      C   
Sbjct: 488 EMSMARKEDQGIYTCVATNILGKVEAQVRLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVK 547

Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
            DP+LKL++ WL+   P+   +    ++  D  LT+   +E D G YTC A TELD   A
Sbjct: 548 HDPTLKLTVTWLKDDAPLYIGNR---MKKEDDGLTIYGVAEKDQGDYTCVASTELDKDSA 604

Query: 393 QATLTVQVPLEAPSN 407
           +A LTV   L  P+N
Sbjct: 605 KAYLTV---LAIPAN 616



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 153/655 (23%), Positives = 258/655 (39%), Gaps = 87/655 (13%)

Query: 73  PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGEAKSYSIDLSV----- 122
           PI+   R+SQG  G  L   +V   D Q  Y+C      ++ + +   Y++ +       
Sbjct: 183 PIHQDKRVSQGQNG-DLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTTRGVT 241

Query: 123 -----LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
                   PY T   + +    +  +  EC ASG+P P+I W   G    + P    +  
Sbjct: 242 ETTPSFMYPYGTSSSQMVLRGVD--LLLECIASGVPAPDIMWYKKG---GELPAGKTKLE 296

Query: 178 GPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTV 236
             N+ + I N+ + D+G Y C A+N +G +   + V V A AP   + P++     G+  
Sbjct: 297 NFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYWLDEPQNLILAPGEDG 355

Query: 237 VLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDVAFADSGEYTCFARN 291
            L CR  G PKP + W+ N + + G      R    +T  +   D     S  Y C A N
Sbjct: 356 RLVCRANGNPKPSIQWLVNGEPIEGSPPNPSREVAGDT--IVFRDTQIGSSAVYQCNASN 413

Query: 292 KLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID 351
           + G    +  ++V +       P +  ++  Q    R +     S   ++ W +  +   
Sbjct: 414 EHGYLLANAFVSVLDVPPRILAPRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQGNM 473

Query: 352 FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE-------- 403
            +        N  SL ++ + + D G YTC A   L  +EAQ  L V+ P          
Sbjct: 474 LDGGNYKAHENG-SLEMSMARKEDQGIYTCVATNILGKVEAQVRLEVKDPTRIVRGPEDQ 532

Query: 404 ------APSNFTLIQVIDAKKAVVSW-NPVSPQSLRGHFR----GYKVQTWTEKDGEGSI 452
                  P     ++     K  V+W    +P  +    +    G  +    EKD     
Sbjct: 533 VVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKEDDGLTIYGVAEKD----- 587

Query: 453 RELIVNKGEST---TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQS 509
                 +G+ T   +TE+DK   ++K +  VLA       P + +     P+  P   + 
Sbjct: 588 ------QGDYTCVASTELDK--DSAKAYLTVLAI------PANRLRDL--PKERPDRPRD 631

Query: 510 LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKL 569
           LE   L   +  L W+  +  N  +  Y ++++  +  + G       Y   P   ++ L
Sbjct: 632 LELSDLAERSVKLTWIPGDDNNSPITDYIVQFEEDR-FQPGTWHNHSRY---PGNVNSAL 687

Query: 570 AGLEPSTKYRIHLAGYTKAGDGAES----KYLF--YVPFKNPDNVEGRGSTPNNLVISWT 623
             L P   Y+  +      G    S    +Y      P  NP  V+G G+  NN+ I+WT
Sbjct: 688 LSLSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEITWT 747

Query: 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            +   +   P+ +Y + WRR +   +W  + V   R    V+ N P + PYEIKV
Sbjct: 748 PLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRH---VVWNTPIYVPYEIKV 799



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 148/572 (25%), Positives = 218/572 (38%), Gaps = 54/572 (9%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P   W  +G PI     NPS  ++    G +++ +  +      Y C  S
Sbjct: 357 LVCRANGNPKPSIQWLVNGEPIEGSPPNPSREVA----GDTIVFRDTQIGSSAVYQCNAS 412

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  +SVL  P   + P  + I   +      +C   G P P + W  NG+ 
Sbjct: 413 NEHGYLLANAF-VSVLDVPPRILAPRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQG 471

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
                 N +       + +   RK D G Y C ATN LG V   V + V      I   P
Sbjct: 472 NMLDGGNYKAHEN-GSLEMSMARKEDQGIYTCVATNILGKVEAQVRLEV-KDPTRIVRGP 529

Query: 226 KDEYTVDGKTVVLTCRVFGAP--KPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSG 283
           +D+    G    L CRV   P  K  V W+ +   L  G     E   L I  VA  D G
Sbjct: 530 EDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKEDDGLTIYGVAEKDQG 589

Query: 284 EYTCFARNKLGTAQGSGSLTVKE--HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +YTC A  +L        LTV       + D P++      +      + +++ S+KL+ 
Sbjct: 590 DYTCVASTELDKDSAKAYLTVLAIPANRLRDLPKE---RPDRPRDLELSDLAERSVKLT- 645

Query: 342 VWLRGSE---PI-----DFESEPRF---VQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
            W+ G +   PI      FE E RF      N        +S L S       Q  +  +
Sbjct: 646 -WIPGDDNNSPITDYIVQFE-EDRFQPGTWHNHSRYPGNVNSALLSLSPYVNYQFRVIAV 703

Query: 391 EAQATLTVQVPLEAPS--------NFTLIQVIDAKK--AVVSWNPVSPQSLRGHFRGYKV 440
               +    +P E           N T +Q    +K    ++W P++     G    Y V
Sbjct: 704 NDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRYIV 763

Query: 441 QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 500
           + W  +D  GS     V            +VP      +V A N     P  E     + 
Sbjct: 764 R-WRRRDPRGSWYNETVKAPRHVVWNTPIYVPYE---IKVQAENDFGRAPEPETYIGYSG 819

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVG-PLLERLPYI 559
           E +P + + L        +  L+W  PE PNGVL GY ++YQ+  G+K G  L+E     
Sbjct: 820 EDLPSSPRYLRIRQPNLESINLEWDHPEHPNGVLTGYNLRYQAFNGSKTGRTLVENF--- 876

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             P  T   +   +P ++YR  L   T+ GDG
Sbjct: 877 -SPNQTRFTVQRTDPISRYRFFLRARTQVGDG 907



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 121/302 (40%), Gaps = 42/302 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSDT--GNY 195
           + +  EC+A G P P   W  NGK   +++ P  + RR+ G   I      + D   G Y
Sbjct: 58  DNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHGGGRPDDYEGEY 117

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNW-- 252
            C A N  G          ++ +P   +   D   VD G  + L C       P V +  
Sbjct: 118 QCFARNDYGTALSSKIHLQVSRSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPPPVIFWM 177

Query: 253 ------IHNQKELTGGRYTILETGDLKITDVAFADSG-EYTCFARNKL-GTAQGSG--SL 302
                 IH  K ++ G     + GDL  ++V   D+  +Y+C AR     T Q     +L
Sbjct: 178 SSSMEPIHQDKRVSQG-----QNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTL 232

Query: 303 TVKEHTHITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWL-RGSEPID 351
            VK    +T+    +    G S++            C A   P+    I+W  +G E   
Sbjct: 233 KVKTTRGVTETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPA--PDIMWYKKGGE--- 287

Query: 352 FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNF 408
             +    +++ + +L ++  SE DSG+Y C A  ++  I    ++ V+     L+ P N 
Sbjct: 288 LPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPQNL 347

Query: 409 TL 410
            L
Sbjct: 348 IL 349



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 76/193 (39%), Gaps = 36/193 (18%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELT------------G 261
           L   P IT+    +Y VD +  + + C   G P P  +W  N K                
Sbjct: 38  LPQPPTITKQSVKDYIVDPRDNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRS 97

Query: 262 GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP------- 314
           G   I   G  +  D      GEY CFARN  GTA     L+ K H  ++  P       
Sbjct: 98  GTLVIDFHGGGRPDDY----EGEYQCFARNDYGTA-----LSSKIHLQVSRSPLWPKEKV 148

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS-EPIDFESEPRFVQSND--YSLTVTKS 371
           +  EV+ G   + +CN        + I W+  S EPI  +      Q+ D  +S  + + 
Sbjct: 149 DVIEVDEGAPLSLQCNPPPGLPPPV-IFWMSSSMEPIHQDKRVSQGQNGDLYFSNVMLQD 207

Query: 372 SELDSGQYTCRAQ 384
           ++ D   Y+C A+
Sbjct: 208 AQTD---YSCNAR 217


>gi|344235989|gb|EGV92092.1| Neural cell adhesion molecule L1 [Cricetulus griseus]
          Length = 1287

 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 182/646 (28%), Positives = 280/646 (43%), Gaps = 82/646 (12%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W     P+ P+ R+   N+ K+L + +V   D G YT
Sbjct: 245 VALQGQPLILECIAEGFPTPTIKWLHPSDPM-PAHRVIYQNHNKTLQLLNVGEEDDGEYT 303

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 304 CLAENSLGSAR-HAYYVTVEAAPYWLQKPQSHLYGPGETARLDCQVQGRPQPEVTWSING 362

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             + +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+     I  
Sbjct: 363 MSMEKVNKDQKYRIEQGSLILSNVQPSDTMVTQCEARNQHGLLLANAYIYVVQLPARILT 422

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
                Y  V+G T  L C+ FGAP P V W+  +    L   R+     G L I D+   
Sbjct: 423 KDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGTLGIRDLQAN 482

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VKE T IT+ P     + G   TF C A  DPSL+ S
Sbjct: 483 DTGRYFCQAANDQNNVTILANLQVKEATQITEGPRSAIEKKGARVTFTCQASFDPSLQAS 542

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 543 ITWRGDGRDLQERGDSDKYFIE--DGQLVIQSLDYSDQGNYSCVASTELDEVESRAQLLV 600

Query: 399 QVPLEAPSNFTLIQVID-----AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
              + +P   + +++ D       +  +SW+P   +        Y ++   ++       
Sbjct: 601 ---VGSPGPVSHLELSDRYLLKQSQVHLSWSPA--EDHNSPIEKYDIEFEDKEMAPEKWY 655

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTVQSLEA 512
            L    G  T+T + K  P      RV A N    G PS +  + VTPE           
Sbjct: 656 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEA---------- 704

Query: 513 IPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGL 572
             L ++A  L+          L+ Y    QS             P++  P  ++ +L   
Sbjct: 705 -ELRTTAAVLE----------LLSYCFMGQSG------------PFVPCPCCSTDRLT-- 739

Query: 573 EPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNA 632
                                  + F  P KNP +V G G+  NN+VI+W  +  ++ NA
Sbjct: 740 -----------------------HYFPAPEKNPVDVRGEGNETNNMVITWKPLWWMDWNA 776

Query: 633 PHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           P  +YR+ WR     E W +  V D     LV++N  TF PYEIKV
Sbjct: 777 PQVQYRVQWRPQGKQETWKEQTVSD---PFLVVSNTSTFVPYEIKV 819



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 84/186 (45%), Gaps = 9/186 (4%)

Query: 411  IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW----TEKDGEGSI-RELIVNKGESTTT 465
            I + ++   +V W PV    ++GH RGY V  W      K  +  + +  +V    +T+ 
Sbjct: 852  ITIFNSSTVLVRWRPVDLAQVKGHLRGYNVTFWWKGSQRKHSKRHVHKSHMVVPANTTSA 911

Query: 466  EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWV 525
             +    P S     V AFNG   GP SE  +F TPEGVPG  ++L       ++  L W 
Sbjct: 912  ILSGLRPYSSYHVEVGAFNGRGLGPASEW-TFSTPEGVPGHPEALHLECQSDTSLLLHWQ 970

Query: 526  KPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
             P   NGVL GY + Y  + G     L   L   SDP   +  L  L P+ +YR  L   
Sbjct: 971  PPLSHNGVLTGYLLSYHPLDGESKEQLFLNL---SDPELRTHNLTNLNPNLQYRFQLQAT 1027

Query: 586  TKAGDG 591
            T+ G G
Sbjct: 1028 TQQGPG 1033



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 91/387 (23%), Positives = 163/387 (42%), Gaps = 31/387 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLIIK-HVE 95
           ++ V      + L C   G P  +  W+KDG+   P +     + +  Y  S  I+ +  
Sbjct: 36  QRLVVFPTDDISLKCEARGRPQVEFRWTKDGIHFKPKEELGVVVHEAPYSGSFTIEGNNS 95

Query: 96  FSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKAS 150
           F+   QG Y C  SN +G A S+ I L    AP +   TV+P  +   E   +      S
Sbjct: 96  FAQRFQGIYRCYASNKLGTAMSHEIQLVAEGAPKWPKETVKPVEVEEGESVVLPCNPPPS 155

Query: 151 GLPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLGYV 206
             P   I+W+++   I     + R  +G N  +   N+  SD   +Y CNA    +   +
Sbjct: 156 AAPL-RIYWMNSK--ILHIKQDERVSMGQNGDLYFANVLTSDNHSDYICNAHFPGTRTII 212

Query: 207 YK---DVYV----NVLAHAPEI---TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
            K   D+ V    +++   P +   T +      + G+ ++L C   G P P + W+H  
Sbjct: 213 QKEPIDLRVKPTNSMIDRKPRLLFPTNSSSRLVALQGQPLILECIAEGFPTPTIKWLHPS 272

Query: 257 KELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE 315
             +   R         L++ +V   D GEYTC A N LG+A+ +  +TV+   +   +P+
Sbjct: 273 DPMPAHRVIYQNHNKTLQLLNVGEEDDGEYTCLAENSLGSARHAYYVTVEAAPYWLQKPQ 332

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
            +    G++A   C     P  +  + W      ++  ++ +  +    SL ++     D
Sbjct: 333 SHLYGPGETARLDCQVQGRP--QPEVTWSINGMSMEKVNKDQKYRIEQGSLILSNVQPSD 390

Query: 376 SGQYTCRAQTELDFIEAQATL-TVQVP 401
           +    C A+ +   + A A +  VQ+P
Sbjct: 391 TMVTQCEARNQHGLLLANAYIYVVQLP 417



 Score = 46.2 bits (108), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 126/320 (39%), Gaps = 49/320 (15%)

Query: 116 YSIDLSVLAAPYFTVE-PEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPR 174
           + I   V+  P  T + P+ +     + ++ +C+A G P+ E  W  +G         P+
Sbjct: 18  FLILFPVMEPPVITEQSPQRLVVFPTDDISLKCEARGRPQVEFRWTKDGIHF-----KPK 72

Query: 175 RKVG--------PNRITIE---NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-T 222
            ++G            TIE   +  +   G Y C A+N LG         V   AP+   
Sbjct: 73  EELGVVVHEAPYSGSFTIEGNNSFAQRFQGIYRCYASNKLGTAMSHEIQLVAEGAPKWPK 132

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL---TGGRYTILETGDLKITDVAF 279
           E  K     +G++VVL C    +  P   +  N K L      R ++ + GDL   +V  
Sbjct: 133 ETVKPVEVEEGESVVLPCNPPPSAAPLRIYWMNSKILHIKQDERVSMGQNGDLYFANVLT 192

Query: 280 ADS-GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE------------------ 320
           +D+  +Y C A        G+ ++  KE   +  +P +  ++                  
Sbjct: 193 SDNHSDYICNAH-----FPGTRTIIQKEPIDLRVKPTNSMIDRKPRLLFPTNSSSRLVAL 247

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
            GQ     C A   P+   +I WL  S+P+   +     Q+++ +L +    E D G+YT
Sbjct: 248 QGQPLILECIAEGFPT--PTIKWLHPSDPM--PAHRVIYQNHNKTLQLLNVGEEDDGEYT 303

Query: 381 CRAQTELDFIEAQATLTVQV 400
           C A+  L        +TV+ 
Sbjct: 304 CLAENSLGSARHAYYVTVEA 323


>gi|28972161|dbj|BAC65534.1| mKIAA0343 protein [Mus musculus]
          Length = 1202

 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 163/513 (31%), Positives = 239/513 (46%), Gaps = 26/513 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W K DG  + P++R    N+ K+L I HV  +D G+Y C
Sbjct: 293 LRGNVLSLECIAEGLPTPIIYWIKEDG--MLPANRTFYRNFKKTLQITHVSEADSGNYQC 350

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I ++V AAPY+ V P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 351 IAKNALG-AVHHTISVTVKAAPYWIVAPQNLVLSPGENGTLICRANGNPKPRISWLTNGV 409

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  A  +P RK+  + I   N+++S +  Y CNA+N  GY+  + +VNVLA  P I  +
Sbjct: 410 PIEIALDDPSRKIDGDTIIFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILTS 469

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + + G L+I       
Sbjct: 470 ANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALHEDIYVLHDNGTLEIPVAQKDS 529

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L  +I
Sbjct: 530 TGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQPEYAVVQRGSKVSFECRVKHDHTLIPTI 589

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  ++ RF    D+ L V+   + D G YTC A T LD   A A L V   
Sbjct: 590 MWLKDNG--ELPNDERFSTDKDH-LVVSDVKDDDGGTYTCTANTTLDSASASAVLRVVDV 646

Query: 402 LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGE 461
              P +  L   +D K   ++W P    +       + ++        G  R      G 
Sbjct: 647 PNPPFDLELTNQLD-KSVQLTWTPGDDNN--SPITKFIIEYEDAMHDAGLWRHQAEVSGT 703

Query: 462 STTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPGTVQSLEAIPLG 516
            TT ++ K  P      RV+A N      PSE     +     P+  P  V+ L   P  
Sbjct: 704 QTTAQL-KLSPYVNYSFRVMAENSIGRSMPSEASEQYLTKAAEPDQNPMAVEGLGTEP-- 760

Query: 517 SSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
                + W KP    Q NG  + YK+ ++   G
Sbjct: 761 -DNLVITW-KPLNGFQSNGPGLQYKVSWRQKDG 791



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 142/557 (25%), Positives = 229/557 (41%), Gaps = 54/557 (9%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W+   K     P N  R    N    + I ++ ++D+GNY C A
Sbjct: 298 LSLECIAEGLPTPIIYWI---KEDGMLPAN--RTFYRNFKKTLQITHVSEADSGNYQCIA 352

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK-- 257
            N+LG V+  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 353 KNALGAVHHTISVTVKA-APYWIVAPQNLVLSPGENGTLICRANGNPKPRISWLTNGVPI 411

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQP 314
           E+     +    GD  I ++V  + S  Y C A NK G    +  + V       +T   
Sbjct: 412 EIALDDPSRKIDGDTIIFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILTSAN 471

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V  ++ +L +  + + 
Sbjct: 472 TLYQVIANRPALLDCAFFGSP--MPTIEWFKGTKGSALH-EDIYVLHDNGTLEIPVAQKD 528

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
            +G YTC A+ +L   + +  L ++ P           +   + AVV          R  
Sbjct: 529 STGTYTCVARNKLGMAKNEVHLEIKDPTRI--------IKQPEYAVVQRGSKVSFECRVK 580

Query: 435 FRGYKVQT--WTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN---- 488
                + T  W + +GE       +   E  +T+ D  V +         +    N    
Sbjct: 581 HDHTLIPTIMWLKDNGE-------LPNDERFSTDKDHLVVSDVKDDDGGTYTCTANTTLD 633

Query: 489 -GPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
               S ++  V    VP     LE       +  L W   +  N  +  + I+Y+     
Sbjct: 634 SASASAVLRVV---DVPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYED--AM 688

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV--P 601
               L      +S  T T+A+L  L P   Y   +      G      A  +YL     P
Sbjct: 689 HDAGLWRHQAEVSG-TQTTAQLK-LSPYVNYSFRVMAENSIGRSMPSEASEQYLTKAAEP 746

Query: 602 FKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQS 661
            +NP  VEG G+ P+NLVI+W  +   + N P  +Y++ WR+ +  + W    V+    S
Sbjct: 747 DQNPMAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTS--VVVANVS 804

Query: 662 ELVLANQPTFQPYEIKV 678
           + +++  PTF PY IKV
Sbjct: 805 KYIVSGTPTFVPYLIKV 821



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV P+S+RGH +GY++  W  +      R  I  K
Sbjct: 844  LPMVAPGNVR-VSVVNSTLAEVHWDPVPPKSVRGHLQGYRIYYWKTQSSSKRNRRHIEKK 902

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 903  ILTFQGTKTHGMLPGLQPYSHYALNVRVVNGKGEGPASTDRGFHTPEGVPSAPSSLKIVN 962

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y ++YQ +  T ++GPL++ ++P       T   L  L
Sbjct: 963  PTLDSLTLEWDPPSHPNGILTEYILQYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 1018

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T  G G++
Sbjct: 1019 NFSTRYKFYFYAQTSVGPGSQ 1039



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 145/607 (23%), Positives = 229/607 (37%), Gaps = 75/607 (12%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+ S    Y C  S
Sbjct: 390 LICRANGNPKPRISWLTNGVPIEIALDDPSRKID----GDTIIFSNVQESSSAVYQCNAS 445

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T                +C   G P P I W   G  
Sbjct: 446 NKYGYLLANAF-VNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPMPTIEWF-KGTK 503

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
            S    +         + I   +K  TG Y C A N LG    +V++ +      I + P
Sbjct: 504 GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQP 562

Query: 226 KDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRYTILETGDLKITDVAFADSG 283
           +      G  V   CRV       P + W+ +  EL        +   L ++DV   D G
Sbjct: 563 EYAVVQRGSKVSFECRVKHDHTLIPTIMWLKDNGELPNDERFSTDKDHLVVSDVKDDDGG 622

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVW 343
            YTC A   L +A  S  L V +   + + P D E+          N + D S++L+  W
Sbjct: 623 TYTCTANTTLDSASASAVLRVVD---VPNPPFDLEL---------TNQL-DKSVQLT--W 667

Query: 344 LRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQATL 396
             G +   PI     E E     +  +      S    + Q          F + A+ ++
Sbjct: 668 TPGDDNNSPITKFIIEYEDAMHDAGLWRHQAEVSGTQTTAQLKLSPYVNYSFRVMAENSI 727

Query: 397 TVQVPLEAPSNFTLIQV-------------IDAKKAVVSWNPVSPQSLRGHFRGYKVQTW 443
              +P EA   +                   +    V++W P++     G    YKV +W
Sbjct: 728 GRSMPSEASEQYLTKAAEPDQNPMAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKV-SW 786

Query: 444 TEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFV--- 498
            +KDG+     ++V N  +   +    FVP      +V A N     P P+ ++      
Sbjct: 787 RQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAAVMGHSGED 843

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLE 554
            P   PG V+      + S+   + W  V P+   G L GY+I Y   + +  +    +E
Sbjct: 844 LPMVAPGNVR---VSVVNSTLAEVHWDPVPPKSVRGHLQGYRIYYWKTQSSSKRNRRHIE 900

Query: 555 RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGS 613
           +       T T   L GL+P + Y +++      G+G A +   F+ P       EG  S
Sbjct: 901 KKILTFQGTKTHGMLPGLQPYSHYALNVRVVNGKGEGPASTDRGFHTP-------EGVPS 953

Query: 614 TPNNLVI 620
            P++L I
Sbjct: 954 APSSLKI 960



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 128/344 (37%), Gaps = 57/344 (16%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNGKPIS-QAP 170
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 43  ISALDVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKD 102

Query: 171 PNPRRKVGPNRITIENLR--KSDT--GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
           P    K G   + I  +   K++T  G Y C A N  G    +  V   + +P  T+   
Sbjct: 103 PLVTMKPGSGTLVINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKERL 162

Query: 227 DEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKITDVAFADS 282
           +   + +G+++VL CR   G P   + W+ N  Q+     R +    GDL  ++V   D+
Sbjct: 163 EPIVLQNGQSLVLPCRPPIGLPPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDT 222

Query: 283 GE-YTCFAR----------------------------NKLGTAQGSGSLTVKEHTHITDQ 313
            E Y C+AR                              L   +  G+ + KE       
Sbjct: 223 REDYICYARFNHTQTIQQKQPISLKVISVDELNDTIAANLSDTEFYGAKSSKERPPTFLT 282

Query: 314 PEDYEVEA----GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
           PE  E       G   +  C A   P+    I W++  E     +   F ++   +L +T
Sbjct: 283 PEGNESHKEELRGNVLSLECIAEGLPT--PIIYWIK--EDGMLPANRTFYRNFKKTLQIT 338

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             SE DSG Y C A+  L  +    ++TV+     + AP N  L
Sbjct: 339 HVSEADSGNYQCIAKNALGAVHHTISVTVKAAPYWIVAPQNLVL 382


>gi|34101310|gb|AAQ57662.1| sidekick 1 [Mus musculus]
 gi|187951057|gb|AAI38454.1| Sidekick homolog 1 (chicken) [Mus musculus]
          Length = 1933

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 194/642 (30%), Positives = 278/642 (43%), Gaps = 38/642 (5%)

Query: 22  TGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDR 79
           +G + +    AP        + V   + +  L CI    P+ +    W ++GV      R
Sbjct: 4   SGDTGTHEAMAPIIVVAPGNRSVVAGSSETTLECIANARPVEELSVHWKRNGV------R 57

Query: 80  ISQG--NYGKSLIIKHVEFSDQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEF- 134
           ++ G  +YG+ L I +   +D G Y CE +      E       LS++  PYFT EPE  
Sbjct: 58  LTSGLHSYGRRLTITNPTSADTGMYVCEATLRGSTFEPARARAFLSIIEPPYFTAEPESR 117

Query: 135 INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTG 193
           I    EET+   C+A G+P P + W  +  P+S+   NPR KV P+  + I+ L   D+G
Sbjct: 118 ILGEVEETMDIPCRAMGVPLPTLQWYKDAVPLSKLQ-NPRYKVLPSGGLHIQKLSPEDSG 176

Query: 194 NYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWI 253
            + C A+N  G V    Y++V   AP  T+ P D    DG T VL C V GAPKP + W 
Sbjct: 177 IFQCFASNEGGEVQTHTYLDVTNIAPAFTQRPVDTTVTDGMTAVLRCEVSGAPKPAITWK 236

Query: 254 HNQKELTGG-----RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT 308
                L  G     R+ +LE+G L+I  V   D+G YTC+A N   +   S  LTV   T
Sbjct: 237 RGNHILASGSVRIPRFMLLESGGLRIAPVFIQDAGNYTCYAANTEASVNASAMLTVWNRT 296

Query: 309 HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
            I   PED  V  G +AT  C A  DP   L  VW + +  I   S  R V   D SL +
Sbjct: 297 SIVHPPEDRVVIKGTTATLCCGATHDPRTSLRYVWKKDNVVITASSSSRIVVEKDGSLVI 356

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
           +++   D G YTC   +E       A L V + L  P    L  +  A+   V+ + V P
Sbjct: 357 SQTWSGDIGDYTCEIISEGGSDSRTARLEV-IELPHPPQNLLASLSPARSHSVTLSWVRP 415

Query: 429 QSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG-ESTTTEVDKFVPASKNFARVLAFNGAY 487
                    Y VQ  +E +    +   + N G E T   V    PA     RV A N   
Sbjct: 416 FDGNSPVLYYIVQV-SENNSPWKVH--LSNVGPEMTGVTVSGLTPARTYQFRVCAVNQVG 472

Query: 488 NGPPS-EIISFVTPEGVPGT-VQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQS 543
            G  S E    + PE  P    +++ A    + +  ++W  P +   NGVL GY ++Y+ 
Sbjct: 473 KGQYSTETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYR- 531

Query: 544 VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LF 598
           + G    P   +   IS P      +  L   T+Y I +A Y  AG G  S+      L 
Sbjct: 532 LAGL---PGEHQQRNISSPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQ 588

Query: 599 YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
            VP   P NV+        +   W   P+   N  +  Y++ 
Sbjct: 589 GVPTAPPQNVQAEAVNSTTVHFLWNPPPQQFINGINQGYKLL 630



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 100/238 (42%), Gaps = 19/238 (7%)

Query: 389 FIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
           F  A    T+Q VP   P N    + +++      WNP   Q + G  +GYK+  W    
Sbjct: 578 FSRAVTEYTLQGVPTAPPQNVQ-AEAVNSTTVHFLWNPPPQQFINGINQGYKLLAWPADA 636

Query: 448 GEG----SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGV 503
            E     +I            T + KF   +  F  VL F    +GPPS      T E  
Sbjct: 637 PETVTVVTIAPDFHGIHHGYITNLKKF---TAYFTSVLCFTTPGDGPPSSPQLVWTHEDK 693

Query: 504 PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
           PG V  L    +  ++  + W +P + NG++MGY+I ++       G    RL +  + T
Sbjct: 694 PGAVGHLSFTEILDTSLKVSWQEPLERNGIIMGYQISWEV-----YGRNDSRLTHTLNST 748

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVIS 621
           T   K+ GL   T Y I +A  T AG G  +     +    P ++ G    P+NLVIS
Sbjct: 749 THEYKIQGLSSLTTYTIDVAALTAAGVGVTTSST--ISSGVPPDLPG---APSNLVIS 801



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 8/158 (5%)

Query: 391  EAQATLTVQV------PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWT 444
            E+ A++ V+V      P  AP N   +  + A +  V+W+P  P+S  G+ +GYKV  W 
Sbjct: 1407 ESPASVPVEVFVGEAAPAMAPQNVQ-VTPLTASQLEVTWDPPPPESQNGNIQGYKVYYW- 1464

Query: 445  EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVP 504
            E D      ++ V        ++      +K    + AFN A +GP S+     T +  P
Sbjct: 1465 EADSRNETEKMKVLFLPEPVVKIKDLTSHTKYLISISAFNAAGDGPKSDPCQGRTHQAAP 1524

Query: 505  GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
            G    L    + S+   + W +P   NG+L GY++ Y+
Sbjct: 1525 GPPSFLAFSEITSTTLNVSWGEPSAANGILQGYRVVYE 1562



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 12/208 (5%)

Query: 397  TVQVPLE-APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIR 453
            T+Q P + AP++ T ++        + W P+      G+    GY+V+ W       ++ 
Sbjct: 890  TLQAPPDVAPTSLT-VRTASETSLRLRWVPLPDSQYNGNPESVGYRVKYWRSDQPSSALA 948

Query: 454  ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEA 512
            +++ ++ E   T +++    ++   R+ AFN    GP SE++   T E VP    +++ A
Sbjct: 949  QVVSDRLERELT-IEELEEWTEYELRMQAFNAIGAGPWSELVRGRTRESVPSAAPENVSA 1007

Query: 513  IPLGSSAFYLKWVK-PEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
              + S+   L W   PEQ  NG+++GYK+ Y   K     P   R   +    T SA LA
Sbjct: 1008 EAVSSTQILLTWASVPEQDQNGLILGYKVLY-CAKDLDPEP---RSHVVRGNHTQSALLA 1063

Query: 571  GLEPSTKYRIHLAGYTKAGDGAESKYLF 598
            GL     Y + +  +T+ G+G  S  L 
Sbjct: 1064 GLRKFVVYELQVLAFTRIGNGVPSSPLI 1091



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 21/200 (10%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V  Q   G   GYKV  +  KD +   R  +V  
Sbjct: 997  VPSAAPENVS-AEAVSSTQILLTWASVPEQDQNGLILGYKV-LYCAKDLDPEPRSHVVRG 1054

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNG-PPSEIISFVTPEGVPGTVQSLEAIPLGSS 518
              + +  +           +VLAF    NG P S +I   T +  PG    L    +  +
Sbjct: 1055 NHTQSALLAGLRKFVVYELQVLAFTRIGNGVPSSPLILERTKDDTPGPPVRLVFPEVRLT 1114

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGT-------KVGPLLERLPYISDPTTTSAKLAG 571
            A  + W  PE+PNGV++GY+I Y+   G+       +VG  + +         T+ +LA 
Sbjct: 1115 AVRIVWQPPEEPNGVILGYQIAYRLASGSPHTFTTVEVGATVRQF--------TATELA- 1165

Query: 572  LEPSTKYRIHLAGYTKAGDG 591
              P + Y   L+  T+ G G
Sbjct: 1166 --PESAYIFRLSAKTRQGWG 1183



 Score = 47.8 bits (112), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 33/234 (14%)

Query: 388  DF-IEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE 445
            DF  E +A  T+Q VP E P + +      +   ++ W P   +SL G  +GY++  + E
Sbjct: 1285 DFSAETEAVTTLQDVPGEPPGSVSATPHTTSS-VLIQWQPPRDESLNGLLQGYRIY-YRE 1342

Query: 446  KDGE-------GSIRELIVNKGESTTTEVDKFVPAS-----------KNFARVLAFNGAY 487
             + E        +++     + E T     K V +S           K + R      AY
Sbjct: 1343 LESETGMSPEPKTLKSPSALRAELTAQSSFKTVNSSSSLTTYELTHLKKYRRYEVIMTAY 1402

Query: 488  N----GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIK 540
            N     P S  +     E  P    Q+++  PL +S   + W    PE  NG + GYK+ 
Sbjct: 1403 NIIGESPASVPVEVFVGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKVY 1462

Query: 541  YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y           ++ L ++ +P     K+  L   TKY I ++ +  AGDG +S
Sbjct: 1463 YWEADSRNETEKMKVL-FLPEPV---VKIKDLTSHTKYLISISAFNAAGDGPKS 1512


>gi|237858643|ref|NP_001153793.1| neurofascin isoform 5 precursor [Gallus gallus]
          Length = 1069

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/375 (35%), Positives = 192/375 (51%), Gaps = 13/375 (3%)

Query: 37  YVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEF 96
           Y T   ++ LR   + L CI  G P P  +W K G  + P+ +    N+ K+L I +V  
Sbjct: 251 YGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGGEL-PAGKTKLENFNKALRISNVSE 309

Query: 97  SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE 156
            D G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P 
Sbjct: 310 EDSGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPQNLILAPGEDGRLVCRANGNPKPS 368

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           I W+ NG+PI  +PPNP R+V  + I   + +   +  Y CNA+N  GY+  + +V+VL 
Sbjct: 369 IQWLVNGEPIEGSPPNPSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLD 428

Query: 217 HAPEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDL 272
             P I  AP+++    +      L C  FG+P P + W  N +   L GG Y   E G L
Sbjct: 429 VPPRIL-APRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQGNMLDGGNYKAHENGSL 487

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV 332
           +++     D G YTC A N LG  +    L VK+ T I   PED  V+ G      C   
Sbjct: 488 EMSMARKEDQGIYTCVATNILGKVEAQVRLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVK 547

Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
            DP+LKL++ WL+   P+   +    ++  D  LT+   +E D G YTC A TELD   A
Sbjct: 548 HDPTLKLTVTWLKDDAPLYIGNR---MKKEDDGLTIYGVAEKDQGDYTCVASTELDKDSA 604

Query: 393 QATLTVQVPLEAPSN 407
           +A LTV   L  P+N
Sbjct: 605 KAYLTV---LAIPAN 616



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 153/655 (23%), Positives = 258/655 (39%), Gaps = 87/655 (13%)

Query: 73  PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGEAKSYSIDLSV----- 122
           PI+   R+SQG  G  L   +V   D Q  Y+C      ++ + +   Y++ +       
Sbjct: 183 PIHQDKRVSQGQNG-DLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTTRGVT 241

Query: 123 -----LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
                   PY T   + +    +  +  EC ASG+P P+I W   G    + P    +  
Sbjct: 242 ETTPSFMYPYGTSSSQMVLRGVD--LLLECIASGVPAPDIMWYKKG---GELPAGKTKLE 296

Query: 178 GPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTV 236
             N+ + I N+ + D+G Y C A+N +G +   + V V A AP   + P++     G+  
Sbjct: 297 NFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYWLDEPQNLILAPGEDG 355

Query: 237 VLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDVAFADSGEYTCFARN 291
            L CR  G PKP + W+ N + + G      R    +T  +   D     S  Y C A N
Sbjct: 356 RLVCRANGNPKPSIQWLVNGEPIEGSPPNPSREVAGDT--IVFRDTQIGSSAVYQCNASN 413

Query: 292 KLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID 351
           + G    +  ++V +       P +  ++  Q    R +     S   ++ W +  +   
Sbjct: 414 EHGYLLANAFVSVLDVPPRILAPRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQGNM 473

Query: 352 FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE-------- 403
            +        N  SL ++ + + D G YTC A   L  +EAQ  L V+ P          
Sbjct: 474 LDGGNYKAHENG-SLEMSMARKEDQGIYTCVATNILGKVEAQVRLEVKDPTRIVRGPEDQ 532

Query: 404 ------APSNFTLIQVIDAKKAVVSW-NPVSPQSLRGHFR----GYKVQTWTEKDGEGSI 452
                  P     ++     K  V+W    +P  +    +    G  +    EKD     
Sbjct: 533 VVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKEDDGLTIYGVAEKD----- 587

Query: 453 RELIVNKGEST---TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQS 509
                 +G+ T   +TE+DK   ++K +  VLA       P + +     P+  P   + 
Sbjct: 588 ------QGDYTCVASTELDK--DSAKAYLTVLAI------PANRLRDL--PKERPDRPRD 631

Query: 510 LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKL 569
           LE   L   +  L W+  +  N  +  Y ++++  +  + G       Y   P   ++ L
Sbjct: 632 LELSDLAERSVKLTWIPGDDNNSPITDYIVQFEEDR-FQPGTWHNHSRY---PGNVNSAL 687

Query: 570 AGLEPSTKYRIHLAGYTKAGDGAES----KYLF--YVPFKNPDNVEGRGSTPNNLVISWT 623
             L P   Y+  +      G    S    +Y      P  NP  V+G G+  NN+ I+WT
Sbjct: 688 LSLSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEITWT 747

Query: 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            +   +   P+ +Y + WRR +   +W  + V   R    V+ N P + PYEIKV
Sbjct: 748 PLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRH---VVWNTPIYVPYEIKV 799



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 148/572 (25%), Positives = 218/572 (38%), Gaps = 54/572 (9%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P   W  +G PI     NPS  ++    G +++ +  +      Y C  S
Sbjct: 357 LVCRANGNPKPSIQWLVNGEPIEGSPPNPSREVA----GDTIVFRDTQIGSSAVYQCNAS 412

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  +SVL  P   + P  + I   +      +C   G P P + W  NG+ 
Sbjct: 413 NEHGYLLANAF-VSVLDVPPRILAPRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQG 471

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
                 N +       + +   RK D G Y C ATN LG V   V + V      I   P
Sbjct: 472 NMLDGGNYKAHEN-GSLEMSMARKEDQGIYTCVATNILGKVEAQVRLEV-KDPTRIVRGP 529

Query: 226 KDEYTVDGKTVVLTCRVFGAP--KPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSG 283
           +D+    G    L CRV   P  K  V W+ +   L  G     E   L I  VA  D G
Sbjct: 530 EDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKEDDGLTIYGVAEKDQG 589

Query: 284 EYTCFARNKLGTAQGSGSLTVKE--HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +YTC A  +L        LTV       + D P++      +      + +++ S+KL+ 
Sbjct: 590 DYTCVASTELDKDSAKAYLTVLAIPANRLRDLPKE---RPDRPRDLELSDLAERSVKLT- 645

Query: 342 VWLRGSE---PI-----DFESEPRF---VQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
            W+ G +   PI      FE E RF      N        +S L S       Q  +  +
Sbjct: 646 -WIPGDDNNSPITDYIVQFE-EDRFQPGTWHNHSRYPGNVNSALLSLSPYVNYQFRVIAV 703

Query: 391 EAQATLTVQVPLEAPS--------NFTLIQVIDAKK--AVVSWNPVSPQSLRGHFRGYKV 440
               +    +P E           N T +Q    +K    ++W P++     G    Y V
Sbjct: 704 NDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRYIV 763

Query: 441 QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 500
           + W  +D  GS     V            +VP      +V A N     P  E     + 
Sbjct: 764 R-WRRRDPRGSWYNETVKAPRHVVWNTPIYVPYE---IKVQAENDFGRAPEPETYIGYSG 819

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVG-PLLERLPYI 559
           E +P + + L        +  L+W  PE PNGVL GY ++YQ+  G+K G  L+E     
Sbjct: 820 EDLPSSPRYLRIRQPNLESINLEWDHPEHPNGVLTGYNLRYQAFNGSKTGRTLVENF--- 876

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             P  T   +   +P ++YR  L   T+ GDG
Sbjct: 877 -SPNQTRFTVQRTDPISRYRFFLRARTQVGDG 907



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 121/302 (40%), Gaps = 42/302 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSDT--GNY 195
           + +  EC+A G P P   W  NGK   +++ P  + RR+ G   I      + D   G Y
Sbjct: 58  DNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHGGGRPDDYEGEY 117

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNW-- 252
            C A N  G          ++ +P   +   D   VD G  + L C       P V +  
Sbjct: 118 QCFARNDYGTALSSKIHLQVSRSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPPPVIFWM 177

Query: 253 ------IHNQKELTGGRYTILETGDLKITDVAFADSG-EYTCFARNKL-GTAQGSG--SL 302
                 IH  K ++ G     + GDL  ++V   D+  +Y+C AR     T Q     +L
Sbjct: 178 SSSMEPIHQDKRVSQG-----QNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTL 232

Query: 303 TVKEHTHITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWL-RGSEPID 351
            VK    +T+    +    G S++            C A   P+    I+W  +G E   
Sbjct: 233 KVKTTRGVTETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPA--PDIMWYKKGGE--- 287

Query: 352 FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNF 408
             +    +++ + +L ++  SE DSG+Y C A  ++  I    ++ V+     L+ P N 
Sbjct: 288 LPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPQNL 347

Query: 409 TL 410
            L
Sbjct: 348 IL 349



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 76/193 (39%), Gaps = 36/193 (18%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELT------------G 261
           L   P IT+    +Y VD +  + + C   G P P  +W  N K                
Sbjct: 38  LPQPPTITKQSVKDYIVDPRDNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRS 97

Query: 262 GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP------- 314
           G   I   G  +  D      GEY CFARN  GTA     L+ K H  ++  P       
Sbjct: 98  GTLVIDFHGGGRPDDY----EGEYQCFARNDYGTA-----LSSKIHLQVSRSPLWPKEKV 148

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS-EPIDFESEPRFVQSND--YSLTVTKS 371
           +  EV+ G   + +CN        + I W+  S EPI  +      Q+ D  +S  + + 
Sbjct: 149 DVIEVDEGAPLSLQCNPPPGLPPPV-IFWMSSSMEPIHQDKRVSQGQNGDLYFSNVMLQD 207

Query: 372 SELDSGQYTCRAQ 384
           ++ D   Y+C A+
Sbjct: 208 AQTD---YSCNAR 217


>gi|348513039|ref|XP_003444050.1| PREDICTED: neuronal cell adhesion molecule-like [Oreochromis
           niloticus]
          Length = 1268

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 203/720 (28%), Positives = 302/720 (41%), Gaps = 80/720 (11%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           ++ LR  K+E+ CI  G P P   W+K    + PS R S  NY K+L I+ V  SD+G Y
Sbjct: 265 KMVLRGDKLEMECIAEGLPTPHISWTKISGDL-PSKRTSFLNYNKTLHIEDVSASDEGDY 323

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFT-VEPEFINAAEEETVTFECKASGLPEPEIHWVH 161
            C   N +G    ++I ++V AAPY+  V P+ +  A  E+    C ASG P+P I W  
Sbjct: 324 RCTAKNQLGSVH-HTIHVTVKAAPYWIDVPPKNLVLAPGESGRLSCLASGTPKPTITWAM 382

Query: 162 NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           NG  I  +P +  RKV  + I   +++   +  Y CN +N  GY+  + +VNVL+  P +
Sbjct: 383 NGISIENSPKDLSRKVEDDTIIFTDVQPGSSAVYQCNISNEYGYLLSNAFVNVLSEPPRV 442

Query: 222 TEAPKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHN--QKELTGGRYTILETGDLKITDVA 278
              P   Y  +     +L C  FG+P P++ W  +     L    Y + + G L+I    
Sbjct: 443 LTPPNKVYQIIKNHQALLDCSSFGSPMPKITWFKDTWSSILQEDPYILHDNGTLEIRIAQ 502

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
              +G+YTC A N LG  +    L VKE T I  QPE  EV+ G+S  F C    DPSL 
Sbjct: 503 AQHNGKYTCVATNGLGIYENHVYLEVKEPTRILKQPEYKEVQRGRSVVFECTVKHDPSLI 562

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
            ++ WL+     +   + R +  +D SLT+T  +E D+G YTC   T LD   A A LTV
Sbjct: 563 PTMTWLKDDG--ELPDDERLIVDSD-SLTITDVTEDDAGVYTCIMNTTLDHDSATAKLTV 619

Query: 399 QVPLEAPSNFTLIQVIDAKKAVV--SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
              +E P   T +++ D KK  V  +W P    +     + + +Q        G    L 
Sbjct: 620 ---VERPDPPTDLELTDQKKRSVQLTWTPGDEHN--SPVQKFLIQYEDSLHHRGHWHNLT 674

Query: 457 VNKGESTTTEVDKFVPASKNFARVLAFNG-AYNGP--PSEIISF--VTPEGVPGTVQSLE 511
              G  TT  + K  P      RVLA N   ++ P  PS +       P+  P  VQ   
Sbjct: 675 EVPGTKTTAHL-KLSPHVHYTFRVLALNAVGFSNPSRPSRMYKTEPAAPDENPTGVQGFG 733

Query: 512 AIPLGSSAFYLKWVKP---EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
                 +   + W KP    Q NG  + YK+ ++  K      +      ++    +   
Sbjct: 734 T---EHNNLVISW-KPLTNLQSNGPGLHYKVMWRQKK------VESEWNIVTVSNNSKFV 783

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWT 623
           ++G      Y I +      G G +           +P   P+NV         + + W 
Sbjct: 784 VSGTPTFVPYEIKVQAVNDHGLGPDPAIAHGYSGEDLPVAAPENVHAVVRNSTLVEVFWD 843

Query: 624 AMPE--IEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQT 681
            +P   I  N   +K   +WR+H+     N D +                          
Sbjct: 844 PVPSHLIRGNLKGYKVS-YWRKHHYKH--NPDHM-------------------------- 874

Query: 682 WTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
             E+D       ++V  G  T   +    P S     V  +NG   GP S    F TPEG
Sbjct: 875 --EQD-------ILVFSGNHTQGMLPGLHPFSLYLFNVRVYNGKGEGPLSVTQQFKTPEG 925



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 152/619 (24%), Positives = 237/619 (38%), Gaps = 68/619 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVG 111
           L C+  GTP P   W+ +G+ I N    +S+     ++I   V+      Y C +SN  G
Sbjct: 366 LSCLASGTPKPTITWAMNGISIENSPKDLSRKVEDDTIIFTDVQPGSSAVYQCNISNEYG 425

Query: 112 EAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNG-KPISQ 168
              S +  ++VL+ P   + P  +     +      +C + G P P+I W  +    I Q
Sbjct: 426 YLLSNAF-VNVLSEPPRVLTPPNKVYQIIKNHQALLDCSSFGSPMPKITWFKDTWSSILQ 484

Query: 169 APPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
             P      G   I I   + +  G Y C ATN LG     VY+ V      I + P+ +
Sbjct: 485 EDPYILHDNGTLEIRIAQAQHN--GKYTCVATNGLGIYENHVYLEV-KEPTRILKQPEYK 541

Query: 229 YTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYT 286
               G++VV  C V   P   P + W+ +  EL      I+++  L ITDV   D+G YT
Sbjct: 542 EVQRGRSVVFECTVKHDPSLIPTMTWLKDDGELPDDERLIVDSDSLTITDVTEDDAGVYT 601

Query: 287 CFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           C     L     +  LTV E     D P D E+   +  +            + + W  G
Sbjct: 602 CIMNTTLDHDSATAKLTVVER---PDPPTDLELTDQKKRS------------VQLTWTPG 646

Query: 347 SEPIDFESEPRFVQSND--------YSLTVTKSSELDSG-------QYTCR--AQTELDF 389
            E  +   +   +Q  D        ++LT    ++  +         YT R  A   + F
Sbjct: 647 DEH-NSPVQKFLIQYEDSLHHRGHWHNLTEVPGTKTTAHLKLSPHVHYTFRVLALNAVGF 705

Query: 390 IEAQ--ATLTVQVPLEAPSNFTLIQVI--DAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE 445
                 + +    P     N T +Q    +    V+SW P++     G    YKV  W +
Sbjct: 706 SNPSRPSRMYKTEPAAPDENPTGVQGFGTEHNNLVISWKPLTNLQSNGPGLHYKVM-WRQ 764

Query: 446 KDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVP 504
           K  E     + V N  +   +    FVP      +V A N    GP   I    + E +P
Sbjct: 765 KKVESEWNIVTVSNNSKFVVSGTPTFVPYE---IKVQAVNDHGLGPDPAIAHGYSGEDLP 821

Query: 505 -GTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGP-LLERLPYIS 560
               +++ A+   S+   + W  V      G L GYK+ Y      K  P  +E+   + 
Sbjct: 822 VAAPENVHAVVRNSTLVEVFWDPVPSHLIRGNLKGYKVSYWRKHHYKHNPDHMEQDILVF 881

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGR-------GS 613
               T   L GL P + Y  ++  Y   G+G  S       FK P+ V G         S
Sbjct: 882 SGNHTQGMLPGLHPFSLYLFNVRVYNGKGEGPLS---VTQQFKTPEGVPGSPTSLIVTNS 938

Query: 614 TPNNLVISWTAMPEIEHNA 632
             ++L + W+  P  +HN 
Sbjct: 939 NLDSLTLEWS--PPHDHNG 955



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 94/192 (48%), Gaps = 9/192 (4%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSIREL 455
            +P+ AP N   + V ++    V W+PV    +RG+ +GYKV  W +     + +   +++
Sbjct: 820  LPVAAPENVHAV-VRNSTLVEVFWDPVPSHLIRGNLKGYKVSYWRKHHYKHNPDHMEQDI 878

Query: 456  IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPL 515
            +V  G  T   +    P S     V  +NG   GP S    F TPEGVPG+  SL     
Sbjct: 879  LVFSGNHTQGMLPGLHPFSLYLFNVRVYNGKGEGPLSVTQQFKTPEGVPGSPTSLIVTNS 938

Query: 516  GSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLEP 574
               +  L+W  P   NG + GY +KYQ V  + ++GP +E L   ++   TS  L  L+ 
Sbjct: 939  NLDSLTLEWSPPHDHNGHITGYTLKYQPVNNSNELGP-VEELALAAN--ETSVTLPNLKY 995

Query: 575  STKYRIHLAGYT 586
            ST+Y+ +L   T
Sbjct: 996  STRYKFYLNAKT 1007



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 104/440 (23%), Positives = 176/440 (40%), Gaps = 62/440 (14%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPIN-PSDR-ISQGNYGKSLI 90
           P   Y + K  +    + + + C   G P P   W+++G   +  +DR +       +L+
Sbjct: 32  PTITYQSPKDYIVDPRENIIIHCEAKGKPHPSFSWTRNGTHFDVENDRNVDMKPDSGTLV 91

Query: 91  I----KHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTF 145
           +    + VE   +G Y C   N  G A S++I +    +P ++ E  + I   E  ++  
Sbjct: 92  VDISRERVEHY-EGVYQCTARNKHGTAVSHNIVVRQSRSPLWSKEKIKPIVVQEGVSLVL 150

Query: 146 ECK-ASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGN-YGCNA--- 199
            C+  +GLP P I W+ N     + P + R     N  +   N+R+ DT N Y C A   
Sbjct: 151 PCRPPAGLPPPIIFWMDNN--FQKLPQSKRVSQSLNGDLYFSNIRREDTRNDYICYARFP 208

Query: 200 ---------------------TNSLGYVYKDVYVNVLAHAPEITEAP---------KDEY 229
                                 +++   Y D   ++ + AP     P           + 
Sbjct: 209 HTQTIQQKQPITVRVLNLDEINDTMAAFYND--TDLFSEAPVDDRRPTFLIPSGSSSSKM 266

Query: 230 TVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD-LKITDVAFADSGEYTCF 288
            + G  + + C   G P P ++W     +L   R + L     L I DV+ +D G+Y C 
Sbjct: 267 VLRGDKLEMECIAEGLPTPHISWTKISGDLPSKRTSFLNYNKTLHIEDVSASDEGDYRCT 326

Query: 289 ARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA-GQSATFRCNAVSDPSLKLSIVWLRGS 347
           A+N+LG+   +  +TVK   +  D P    V A G+S    C A   P  K +I W    
Sbjct: 327 AKNQLGSVHHTIHVTVKAAPYWIDVPPKNLVLAPGESGRLSCLASGTP--KPTITWAMNG 384

Query: 348 EPIDFESEPRFV--QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAP 405
             I  E+ P+ +  +  D ++  T      S  Y C    E  ++ + A   V V  E P
Sbjct: 385 --ISIENSPKDLSRKVEDDTIIFTDVQPGSSAVYQCNISNEYGYLLSNA--FVNVLSEPP 440

Query: 406 SNFT----LIQVIDAKKAVV 421
              T    + Q+I   +A++
Sbjct: 441 RVLTPPNKVYQIIKNHQALL 460


>gi|338723807|ref|XP_003364802.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Equus
           caballus]
          Length = 1192

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 165/524 (31%), Positives = 242/524 (46%), Gaps = 38/524 (7%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           LR   + L CI  G P P   W K DG +PIN   R    N+ K+L I  V  +D G+Y 
Sbjct: 264 LRGNVLSLECIAEGLPTPIIYWIKEDGTLPIN---RTFYRNFKKTLQILQVSEADSGNYQ 320

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A  ++I ++V AAPY+ + P+ +  +  E  T  C+A+G P+P I W+ NG
Sbjct: 321 CIAKNALG-AIHHTISVTVKAAPYWIMAPQNLVLSPGEDGTLICRANGKPKPRISWLSNG 379

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I  
Sbjct: 380 VPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT 439

Query: 224 APKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFA 280
           +    Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I      
Sbjct: 440 SANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALREDIYVLHENGTLEIPVAQKD 499

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G + +F C    D +L  +
Sbjct: 500 STGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTPT 559

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           + WL+ +   +  ++ RF    D+ L VT  S+ D G YTC A T LD + A A L V  
Sbjct: 560 VTWLKDNG--ELPNDGRFTVDKDH-LVVTDVSDDDGGTYTCVANTTLDTVSASAVLRVVA 616

Query: 401 PLEAPS----------NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG 450
           P   P+          +  L   +D K   +SW P    +       + ++        G
Sbjct: 617 PTPTPAPIYDVPNPPFDLELTDQLD-KSVQLSWTPGDDNN--SPITKFIIEYEDAMHEAG 673

Query: 451 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPG 505
                    G  TT ++ K  P      RV+A N      PSE     +     P+  P 
Sbjct: 674 LWHHQTEVSGTQTTAQL-KLSPYVNYSFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPT 732

Query: 506 TVQSLEAIPLGSSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
            V+ L + P       + W KP    + NG  + YK+ ++   G
Sbjct: 733 AVEGLGSEP---DNLVITW-KPLNGFESNGPGLQYKVSWRQKDG 772



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 156/638 (24%), Positives = 262/638 (41%), Gaps = 62/638 (9%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTCEV----SNGVGEAKSYSIDL----SVLAAPYF 128
           S+R+SQG  G       +    +  Y C      +  + + +  S+ +    S    P  
Sbjct: 191 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISVKSSRERPPT 250

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGK--PISQAPPNPRRKVGPNRI 182
            + PE   + +EE     ++ EC A GLP P I+W+      PI++      +K     +
Sbjct: 251 FLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKKT----L 306

Query: 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRV 242
            I  + ++D+GNY C A N+LG ++  + V V A AP    AP++     G+   L CR 
Sbjct: 307 QILQVSEADSGNYQCIAKNALGAIHHTISVTVKA-APYWIMAPQNLVLSPGEDGTLICRA 365

Query: 243 FGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGS 299
            G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    +
Sbjct: 366 NGKPKPRISWLSNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLAN 425

Query: 300 GSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             + V       +T     Y+V A + A   C     P    +I W +G++      E  
Sbjct: 426 AFVNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALR-EDI 482

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVI 414
           +V   + +L +  + +  +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q  
Sbjct: 483 YVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQPE-YAVVQ-- 539

Query: 415 DAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE-GSIRELIVNKGESTTTEVDKFVPA 473
             + + VS+       ++         TW + +GE  +     V+K     T+V      
Sbjct: 540 --RGSTVSFE----CKVKHDHTLTPTVTWLKDNGELPNDGRFTVDKDHLVVTDVSD---D 590

Query: 474 SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVK 526
                  +A         S ++  V P   P  +  +   P           +  L W  
Sbjct: 591 DGGTYTCVANTTLDTVSASAVLRVVAPTPTPAPIYDVPNPPFDLELTDQLDKSVQLSWTP 650

Query: 527 PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYT 586
            +  N  +  + I+Y+         L      +S  T T+A+L  L P   Y   +    
Sbjct: 651 GDDNNSPITKFIIEYED--AMHEAGLWHHQTEVSG-TQTTAQLK-LSPYVNYSFRVMAVN 706

Query: 587 KAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
             G      A  +YL     P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ 
Sbjct: 707 SLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVS 766

Query: 641 WRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           WR+ +  + W    VL    S+ +++  PTF PY IKV
Sbjct: 767 WRQKDGDDEWTS--VLVANVSKYIVSGTPTFVPYLIKV 802



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 150/613 (24%), Positives = 235/613 (38%), Gaps = 77/613 (12%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 361 LICRANGKPKPRISWLSNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 416

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T                +C   G P P I W    K 
Sbjct: 417 NEYGYLLANAF-VNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 474

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 475 -GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQ 532

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P+      G TV   C+V       P V W+ +  EL   GR+T+ +   L +TDV+  D
Sbjct: 533 PEYAVVQRGSTVSFECKVKHDHTLTPTVTWLKDNGELPNDGRFTV-DKDHLVVTDVSDDD 591

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHT-------HITDQPEDYEVEAGQSATFRCNAVSD 334
            G YTC A   L T   S  L V   T        + + P D E+              D
Sbjct: 592 GGTYTCVANTTLDTVSASAVLRVVAPTPTPAPIYDVPNPPFDLELTDQL----------D 641

Query: 335 PSLKLSIVWLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
            S++LS  W  G +   PI     E E    ++  +      S    + Q          
Sbjct: 642 KSVQLS--WTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTEVSGTQTTAQLKLSPYVNYS 699

Query: 389 F-IEAQATLTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGH 434
           F + A  +L   +P EA   +           T ++ + ++    V++W P++     G 
Sbjct: 700 FRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGP 759

Query: 435 FRGYKVQTWTEKDGEGS-IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
              YKV +W +KDG+      L+ N  +   +    FVP      +V A N     P   
Sbjct: 760 GLQYKV-SWRQKDGDDEWTSVLVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPA 815

Query: 494 IISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--K 548
           ++   + E +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +
Sbjct: 816 VVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQTSPKR 875

Query: 549 VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDN 607
               +E+       + T   L GLEP + Y +++      G+G A S  +F  P      
Sbjct: 876 NRRHIEKKILTFQGSKTHGMLPGLEPFSHYILNVRVVNGKGEGPASSDRVFNTP------ 929

Query: 608 VEGRGSTPNNLVI 620
            EG  S P++L I
Sbjct: 930 -EGVPSAPSSLKI 941



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 825  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQTSPKRNRRHIEKK 883

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 884  ILTFQGSKTHGMLPGLEPFSHYILNVRVVNGKGEGPASSDRVFNTPEGVPSAPSSLKIVN 943

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y ++YQ +  T ++GP+++ ++P       T   L  L
Sbjct: 944  PTLDSLTLEWDPPSHPNGILTEYTLRYQPINSTHELGPVVDLKIPA----NKTRWTLKNL 999

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1000 NFSTRYKFYFYAQTSAGSGSQ 1020



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 122/296 (41%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   +TI  +   K++T  G Y
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGSGTLTINIMSEGKAETYEGVY 121

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVN-WI 253
            C A N  G    +  V   + +P  T+   +  T+ +G+ +VL C       P +  W+
Sbjct: 122 QCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLRNGQALVLPCSPPIGLPPPIIFWM 181

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK---- 305
            N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK    
Sbjct: 182 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISV 241

Query: 306 ----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
               E       PE    + E   G   +  C A   P+  +  +   G+ PI+      
Sbjct: 242 KSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINR----T 297

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
           F ++   +L + + SE DSG Y C A+  L  I    ++TV+     + AP N  L
Sbjct: 298 FYRNFKKTLQILQVSEADSGNYQCIAKNALGAIHHTISVTVKAAPYWIMAPQNLVL 353


>gi|403287224|ref|XP_003934852.1| PREDICTED: protein sidekick-1 [Saimiri boliviensis boliviensis]
          Length = 2227

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 191/625 (30%), Positives = 276/625 (44%), Gaps = 44/625 (7%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
           + V   + +  L CI    P+ +    W ++GV      RI+ G  ++G+ L I +   +
Sbjct: 316 RSVVAGSSETTLECIASARPVEELSVTWKRNGV------RITSGLHSFGRRLTISNPTSA 369

Query: 98  DQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPE 154
           D G Y CE +      E       L ++  PYFT EPE  I+   EETV   C+A G+P 
Sbjct: 370 DTGLYVCEAALRRSAFEPARAKAFLFIIEPPYFTAEPESRISGEVEETVDIGCRAMGVPL 429

Query: 155 PEIHWVHNGKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P + W  N   IS+   NPR KV     + I+ L   D+G + C A+N  G +    Y++
Sbjct: 430 PTLQWYKNAISISKLQ-NPRYKVLASGGLRIQKLHPEDSGIFQCFASNEGGEIQTHTYLD 488

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V   AP  T+ P D    DG T +L C V GAPKP + W    + L  G     R+ +LE
Sbjct: 489 VTNIAPVFTQRPADTTVTDGMTAILRCEVSGAPKPAITWKRENRILASGSVQIPRFMLLE 548

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L+IT V   D+G YTC+A N  G+   S  LTV   T I   PED+ V  G +AT R
Sbjct: 549 SGGLQITPVFIQDAGNYTCYAANTEGSLNASAMLTVWNRTSIIHPPEDHVVIKGTTATLR 608

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A+ DP + L  VW + +  +   S  R V   D SL ++++   D G YTC   +E  
Sbjct: 609 CGAMHDPRVSLRYVWKKDNVVLTPLSTSRIVVEKDGSLLISQTWSGDIGDYTCDIVSEGG 668

Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV-SWNPVSPQSLRGHFRGYKVQTWTEKD 447
                A L V     +P N           AVV SW  V P         Y V+  +E +
Sbjct: 669 NDSRMARLEVIELPHSPQNLLASPNSSHSHAVVLSW--VRPFDGNSPILYYIVEL-SENN 725

Query: 448 GEGSIRELIVNKG-ESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEG 502
               +   + N G E T   V    PA     RV A N    G Y+   S ++    P  
Sbjct: 726 SPWKVH--LSNVGPEMTGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPS 783

Query: 503 VPGTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560
            P   +++ A    + +  ++W  P +   NGVL GY ++Y+ + G   G   +R   I+
Sbjct: 784 APP--KNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYR-LAGLP-GEYQQR--NIT 837

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEGRGSTP 615
            P      +  L   T+Y I +A Y  AG G  S+      L  VP   P NV+      
Sbjct: 838 SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNS 897

Query: 616 NNLVISWTAMPEIEHNAPHFKYRIF 640
             +   W   P+   N  +  Y++ 
Sbjct: 898 TTIQFLWNPPPQQFINGINQGYKLL 922



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 178/679 (26%), Positives = 269/679 (39%), Gaps = 113/679 (16%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN-GVGEAK-SYSI 118
           P PQ  W ++G  I PS+RI+       L+I     SD G+Y  +  N   GE K S  I
Sbjct: 233 PRPQVTWFREGHKIIPSNRIAI-TLENQLVILATTPSDTGAYYVQAVNEKNGENKTSPFI 291

Query: 119 DLSV--------LAAPYFTVEP--EFINAAEEETVTFECKASGLP--EPEIHWVHNGKPI 166
            LS+          AP   V P    + A   ET T EC AS  P  E  + W  NG  I
Sbjct: 292 HLSIARDIGTSETMAPTIVVPPGNRSVVAGSSET-TLECIASARPVEELSVTWKRNGVRI 350

Query: 167 SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT---NSLGYVYKDVYVNVLAHAPEITE 223
           +    +  R     R+TI N   +DTG Y C A    ++        ++ ++   P  T 
Sbjct: 351 TSGLHSFGR-----RLTISNPTSADTGLYVCEAALRRSAFEPARAKAFLFII-EPPYFTA 404

Query: 224 APKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITDVAF 279
            P+   + +  +TV + CR  G P P + W  N     +L   RY +L +G L+I  +  
Sbjct: 405 EPESRISGEVEETVDIGCRAMGVPLPTLQWYKNAISISKLQNPRYKVLASGGLRIQKLHP 464

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHI-TDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            DSG + CFA N+ G  Q    L V     + T +P D  V  G +A  RC     P  K
Sbjct: 465 EDSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRPADTTVTDGMTAILRCEVSGAP--K 522

Query: 339 LSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            +I W R +  +   S   PRF+      L +T     D+G YTC A      + A A L
Sbjct: 523 PAITWKRENRILASGSVQIPRFMLLESGGLQITPVFIQDAGNYTCYAANTEGSLNASAML 582

Query: 397 TV---QVPLEAPSNFTLIQVIDA------------------KKAVVSWNPVSPQSLRGHF 435
           TV      +  P +  +I+   A                  KK  V   P+S   +    
Sbjct: 583 TVWNRTSIIHPPEDHVVIKGTTATLRCGAMHDPRVSLRYVWKKDNVVLTPLSTSRIVVEK 642

Query: 436 RGYKV--QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
            G  +  QTW+   G+ +    IV++G + +             AR+            E
Sbjct: 643 DGSLLISQTWSGDIGDYTCD--IVSEGGNDS-----------RMARL------------E 677

Query: 494 IISFVTPEGVPGTVQSLEAIPLG--SSAFYLKWVKPEQPNGVLMGYKIKYQ------SVK 545
           +I        P + Q+L A P    S A  L WV+P   N  ++ Y ++         V 
Sbjct: 678 VIEL------PHSPQNLLASPNSSHSHAVVLSWVRPFDGNSPILYYIVELSENNSPWKVH 731

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG---AESKYLFY--- 599
            + VGP +           T   ++GL P+  Y+  +    + G G   AE+  L     
Sbjct: 732 LSNVGPEM-----------TGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEE 780

Query: 600 VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
            P   P N+   G T  ++++ W   PE EHN     Y + +R       + Q ++    
Sbjct: 781 PPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNITSPE 840

Query: 660 QSELVLANQPTFQPYEIKV 678
            +  ++ +   +  YEI+V
Sbjct: 841 VNYCLVTDLIIWTQYEIQV 859



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 102/240 (42%), Gaps = 23/240 (9%)

Query: 389  FIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
            F  A    T+Q VP   P N    + +++      WNP   Q + G  +GYK+  W    
Sbjct: 870  FSRAVTEYTLQGVPTAPPQNVQ-TEAVNSTTIQFLWNPPPQQFINGINQGYKLLAWPADA 928

Query: 448  GEGSIRELI------VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
             E      I      V+ G    T + KF   +  F  VL F    +GPPS      T E
Sbjct: 929  PEAVTVVTIAPDFHGVHHGH--ITNLKKF---TAYFTSVLCFTTPGDGPPSTPQLVWTHE 983

Query: 502  GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
              PG V  L    +  ++  + W +P + NG+++GY+I ++ V G        RL +  +
Sbjct: 984  DKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIIIGYQISWE-VYGRND----SRLTHTLN 1038

Query: 562  PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVIS 621
             TT   K+ GL   T Y I +A  T  G G  +     +    P ++ G    P+NLVIS
Sbjct: 1039 STTHEYKIQGLSSLTTYTIDVAAVTAVGAGLVTSST--ISSGVPPDLPG---APSNLVIS 1093



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 2/142 (1%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP N   +  + A +  V+W+P  P+S  G+ +GYK+  W E D +    ++ V   
Sbjct: 1715 PAMAPQNVQ-VTPLTASQLEVTWDPPPPESQNGNIQGYKIYYW-EADSQNETEKMKVLFL 1772

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
                  +      +K    + AFN A +GP S+     T +  PG    L    + S+  
Sbjct: 1773 PEPVVRLKNLTSHTKYLVSISAFNAAGDGPRSDPQQGRTHQAAPGAPSFLAFSEITSTTL 1832

Query: 521  YLKWVKPEQPNGVLMGYKIKYQ 542
             + W +P   NG+L GY++ Y+
Sbjct: 1833 NVSWGEPAAANGILQGYRVVYE 1854



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 102/281 (36%), Gaps = 29/281 (10%)

Query: 119 DLSVLAAPYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
           DL    APYF  EP       E   +   C A G    E  W+ +   ++          
Sbjct: 111 DLRDDVAPYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMRDDSELTTYSSE----- 165

Query: 178 GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV 237
              +  I +L+K D G Y C   N +G + +      +A+     +  + +    G   +
Sbjct: 166 --YKYIIPSLQKLDAGFYRCVVRNRMGALLQRKSEVHVAYMGSFMDTDQRKTVSQGHAAI 223

Query: 238 LTCR-VFGAPKPEVNWIH-NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNK--- 292
           L    +   P+P+V W     K +   R  I     L I     +D+G Y   A N+   
Sbjct: 224 LNLLPITSYPRPQVTWFREGHKIIPSNRIAITLENQLVILATTPSDTGAYYVQAVNEKNG 283

Query: 293 ---------LGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIV 342
                    L  A+  G+      T I   P +  V AG S  T  C A + P  +LS+ 
Sbjct: 284 ENKTSPFIHLSIARDIGTSETMAPT-IVVPPGNRSVVAGSSETTLECIASARPVEELSVT 342

Query: 343 WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           W R    I        + S    LT++  +  D+G Y C A
Sbjct: 343 WKRNGVRIT-----SGLHSFGRRLTISNPTSADTGLYVCEA 378



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 12/208 (5%)

Query: 397  TVQVPLE-APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIR 453
            T+Q P + AP++ T ++        + W P+      G+    GY+++ W       ++ 
Sbjct: 1182 TLQAPPDVAPASVT-VRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRSDVQSSALA 1240

Query: 454  ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEA 512
            +++ ++ E   T +++     +   ++ AFN    GP SE++   T E VP    +++ A
Sbjct: 1241 QVVSDRLEREFT-IEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRESVPSAAPENVSA 1299

Query: 513  IPLGSSAFYLKWVK-PEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
              + S+   L W   PEQ  NG+++GYKI +++ K     P   R   +    T SA LA
Sbjct: 1300 EAVSSTQILLTWASVPEQDQNGLILGYKILFRA-KDLDAEP---RSHVVRGNHTQSALLA 1355

Query: 571  GLEPSTKYRIHLAGYTKAGDGAESKYLF 598
            GL     Y + +  +T+ G+G  S  L 
Sbjct: 1356 GLRKFVLYELQVLAFTRIGNGVPSTPLI 1383



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 3/144 (2%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V  Q   G   GYK+  +  KD +   R  +V  
Sbjct: 1289 VPSAAPENVS-AEAVSSTQILLTWASVPEQDQNGLILGYKI-LFRAKDLDAEPRSHVVRG 1346

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-IISFVTPEGVPGTVQSLEAIPLGSS 518
              + +  +           +VLAF    NG PS  +I   T +  PG    L    +  +
Sbjct: 1347 NHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLT 1406

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQ 542
            +  + W  PE+PNG+++GY+I Y+
Sbjct: 1407 SVRIVWQPPEEPNGIILGYQIAYR 1430



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 30/229 (13%)

Query: 391  EAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV--QTWTEKD 447
            E +A  T+Q VP E P + +      +   ++ W P   +SL G  +GY++  +    + 
Sbjct: 1581 ETEAVTTLQDVPGEPPGSVSATPHTTSS-VLIQWQPPRDESLNGLLQGYRIYYRELEYEA 1639

Query: 448  GEGS----IRELIVNKGESTTTEVDKFVPAS-----------KNFARVLAFNGAYN---- 488
            G G+    ++  I  + E T     K V +S           K + R      AYN    
Sbjct: 1640 GSGTEAKTLKSPIALRAELTAQSSFKTVNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGE 1699

Query: 489  GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
             P S  +     E  P    Q+++  PL +S   + W    PE  NG + GYKI Y    
Sbjct: 1700 SPASAPVEVFVGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEAD 1759

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
                   ++ L ++ +P     +L  L   TKY + ++ +  AGDG  S
Sbjct: 1760 SQNETEKMKVL-FLPEPV---VRLKNLTSHTKYLVSISAFNAAGDGPRS 1804



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 88/208 (42%), Gaps = 27/208 (12%)

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFVTPEGVPGTVQ-SLEAIPLGSS 518
            E+T   V++  P +    R+ A N   +    SE  +  T + VPG    S+ A P  +S
Sbjct: 1548 EATACVVERLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTS 1607

Query: 519  AFYLKWVKP--EQPNGVLMGYKIKYQSVK-----GTKV----GPLLERLPYI-------- 559
            +  ++W  P  E  NG+L GY+I Y+ ++     GT+      P+  R            
Sbjct: 1608 SVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKSPIALRAELTAQSSFKTV 1667

Query: 560  -SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYV----PFKNPDNVEGRGS 613
             S  T+T  +L  L+   +Y + +  Y   G+  A +    +V    P   P NV+    
Sbjct: 1668 NSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTPL 1727

Query: 614  TPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            T + L ++W   P    N     Y+I++
Sbjct: 1728 TASQLEVTWDPPPPESQNGNIQGYKIYY 1755



 Score = 39.7 bits (91), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 38/166 (22%), Positives = 64/166 (38%), Gaps = 8/166 (4%)

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
           TE    +  ++G  +VLTC   G+   E  W+ +  ELT    T        I  +   D
Sbjct: 122 TEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMRDDSELT----TYSSEYKYIIPSLQKLD 177

Query: 282 SGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           +G Y C  RN++G   Q    + V       D  +   V  G +A      ++    +  
Sbjct: 178 AGFYRCVVRNRMGALLQRKSEVHVAYMGSFMDTDQRKTVSQGHAAILNLLPITS-YPRPQ 236

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + W R    I   +  R   + +  L +  ++  D+G Y  +A  E
Sbjct: 237 VTWFREGHKIIPSN--RIAITLENQLVILATTPSDTGAYYVQAVNE 280


>gi|338723803|ref|XP_003364800.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Equus
           caballus]
          Length = 1180

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 165/524 (31%), Positives = 242/524 (46%), Gaps = 38/524 (7%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           LR   + L CI  G P P   W K DG +PIN   R    N+ K+L I  V  +D G+Y 
Sbjct: 264 LRGNVLSLECIAEGLPTPIIYWIKEDGTLPIN---RTFYRNFKKTLQILQVSEADSGNYQ 320

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A  ++I ++V AAPY+ + P+ +  +  E  T  C+A+G P+P I W+ NG
Sbjct: 321 CIAKNALG-AIHHTISVTVKAAPYWIMAPQNLVLSPGEDGTLICRANGKPKPRISWLSNG 379

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I  
Sbjct: 380 VPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT 439

Query: 224 APKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFA 280
           +    Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I      
Sbjct: 440 SANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALREDIYVLHENGTLEIPVAQKD 499

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G + +F C    D +L  +
Sbjct: 500 STGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTPT 559

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           + WL+ +   +  ++ RF    D+ L VT  S+ D G YTC A T LD + A A L V  
Sbjct: 560 VTWLKDNG--ELPNDGRFTVDKDH-LVVTDVSDDDGGTYTCVANTTLDTVSASAVLRVVA 616

Query: 401 PLEAPS----------NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG 450
           P   P+          +  L   +D K   +SW P    +       + ++        G
Sbjct: 617 PTPTPAPIYDVPNPPFDLELTDQLD-KSVQLSWTPGDDNN--SPITKFIIEYEDAMHEAG 673

Query: 451 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPG 505
                    G  TT ++ K  P      RV+A N      PSE     +     P+  P 
Sbjct: 674 LWHHQTEVSGTQTTAQL-KLSPYVNYSFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPT 732

Query: 506 TVQSLEAIPLGSSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
            V+ L + P       + W KP    + NG  + YK+ ++   G
Sbjct: 733 AVEGLGSEP---DNLVITW-KPLNGFESNGPGLQYKVSWRQKDG 772



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 156/638 (24%), Positives = 262/638 (41%), Gaps = 62/638 (9%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTCEV----SNGVGEAKSYSIDL----SVLAAPYF 128
           S+R+SQG  G       +    +  Y C      +  + + +  S+ +    S    P  
Sbjct: 191 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISVKSSRERPPT 250

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGK--PISQAPPNPRRKVGPNRI 182
            + PE   + +EE     ++ EC A GLP P I+W+      PI++      +K     +
Sbjct: 251 FLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKKT----L 306

Query: 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRV 242
            I  + ++D+GNY C A N+LG ++  + V V A AP    AP++     G+   L CR 
Sbjct: 307 QILQVSEADSGNYQCIAKNALGAIHHTISVTVKA-APYWIMAPQNLVLSPGEDGTLICRA 365

Query: 243 FGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGS 299
            G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    +
Sbjct: 366 NGKPKPRISWLSNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLAN 425

Query: 300 GSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             + V       +T     Y+V A + A   C     P    +I W +G++      E  
Sbjct: 426 AFVNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALR-EDI 482

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVI 414
           +V   + +L +  + +  +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q  
Sbjct: 483 YVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQPE-YAVVQ-- 539

Query: 415 DAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE-GSIRELIVNKGESTTTEVDKFVPA 473
             + + VS+       ++         TW + +GE  +     V+K     T+V      
Sbjct: 540 --RGSTVSFE----CKVKHDHTLTPTVTWLKDNGELPNDGRFTVDKDHLVVTDVSD---D 590

Query: 474 SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVK 526
                  +A         S ++  V P   P  +  +   P           +  L W  
Sbjct: 591 DGGTYTCVANTTLDTVSASAVLRVVAPTPTPAPIYDVPNPPFDLELTDQLDKSVQLSWTP 650

Query: 527 PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYT 586
            +  N  +  + I+Y+         L      +S  T T+A+L  L P   Y   +    
Sbjct: 651 GDDNNSPITKFIIEYED--AMHEAGLWHHQTEVSG-TQTTAQLK-LSPYVNYSFRVMAVN 706

Query: 587 KAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
             G      A  +YL     P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ 
Sbjct: 707 SLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVS 766

Query: 641 WRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           WR+ +  + W    VL    S+ +++  PTF PY IKV
Sbjct: 767 WRQKDGDDEWTS--VLVANVSKYIVSGTPTFVPYLIKV 802



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 150/613 (24%), Positives = 235/613 (38%), Gaps = 77/613 (12%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 361 LICRANGKPKPRISWLSNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 416

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T                +C   G P P I W    K 
Sbjct: 417 NEYGYLLANAF-VNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 474

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 475 -GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQ 532

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P+      G TV   C+V       P V W+ +  EL   GR+T+ +   L +TDV+  D
Sbjct: 533 PEYAVVQRGSTVSFECKVKHDHTLTPTVTWLKDNGELPNDGRFTV-DKDHLVVTDVSDDD 591

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHT-------HITDQPEDYEVEAGQSATFRCNAVSD 334
            G YTC A   L T   S  L V   T        + + P D E+              D
Sbjct: 592 GGTYTCVANTTLDTVSASAVLRVVAPTPTPAPIYDVPNPPFDLELTDQL----------D 641

Query: 335 PSLKLSIVWLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
            S++LS  W  G +   PI     E E    ++  +      S    + Q          
Sbjct: 642 KSVQLS--WTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTEVSGTQTTAQLKLSPYVNYS 699

Query: 389 F-IEAQATLTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGH 434
           F + A  +L   +P EA   +           T ++ + ++    V++W P++     G 
Sbjct: 700 FRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGP 759

Query: 435 FRGYKVQTWTEKDGEGS-IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
              YKV +W +KDG+      L+ N  +   +    FVP      +V A N     P   
Sbjct: 760 GLQYKV-SWRQKDGDDEWTSVLVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPA 815

Query: 494 IISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--K 548
           ++   + E +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +
Sbjct: 816 VVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQTSPKR 875

Query: 549 VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDN 607
               +E+       + T   L GLEP + Y +++      G+G A S  +F  P      
Sbjct: 876 NRRHIEKKILTFQGSKTHGMLPGLEPFSHYILNVRVVNGKGEGPASSDRVFNTP------ 929

Query: 608 VEGRGSTPNNLVI 620
            EG  S P++L I
Sbjct: 930 -EGVPSAPSSLKI 941



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 825  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQTSPKRNRRHIEKK 883

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 884  ILTFQGSKTHGMLPGLEPFSHYILNVRVVNGKGEGPASSDRVFNTPEGVPSAPSSLKIVN 943

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y ++YQ +  T ++GP+++ ++P       T   L  L
Sbjct: 944  PTLDSLTLEWDPPSHPNGILTEYTLRYQPINSTHELGPVVDLKIPA----NKTRWTLKNL 999

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1000 NFSTRYKFYFYAQTSAGSGSQ 1020



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 122/296 (41%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   +TI  +   K++T  G Y
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGSGTLTINIMSEGKAETYEGVY 121

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVN-WI 253
            C A N  G    +  V   + +P  T+   +  T+ +G+ +VL C       P +  W+
Sbjct: 122 QCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLRNGQALVLPCSPPIGLPPPIIFWM 181

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK---- 305
            N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK    
Sbjct: 182 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISV 241

Query: 306 ----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
               E       PE    + E   G   +  C A   P+  +  +   G+ PI+      
Sbjct: 242 KSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINRT---- 297

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
           F ++   +L + + SE DSG Y C A+  L  I    ++TV+     + AP N  L
Sbjct: 298 FYRNFKKTLQILQVSEADSGNYQCIAKNALGAIHHTISVTVKAAPYWIMAPQNLVL 353


>gi|164518930|ref|NP_808547.3| protein sidekick-1 [Mus musculus]
 gi|90183173|sp|Q3UH53.1|SDK1_MOUSE RecName: Full=Protein sidekick-1; Flags: Precursor
 gi|74188487|dbj|BAE28004.1| unnamed protein product [Mus musculus]
          Length = 2193

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 191/622 (30%), Positives = 272/622 (43%), Gaps = 38/622 (6%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
           + V   + +  L CI    P+ +    W ++GV      R++ G  +YG+ L I +   +
Sbjct: 284 RSVVAGSSETTLECIANARPVEELSVHWKRNGV------RLTSGLHSYGRRLTITNPTSA 337

Query: 98  DQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPE 154
           D G Y CE +      E       LS++  PYFT EPE  I    EET+   C+A G+P 
Sbjct: 338 DTGMYVCEATLRGSTFEPARARAFLSIIEPPYFTAEPESRILGEVEETMDIPCRAMGVPL 397

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P + W  +  P+S+   NPR KV P+  + I+ L   D+G + C A+N  G V    Y++
Sbjct: 398 PTLQWYKDAVPLSKLQ-NPRYKVLPSGGLHIQKLSPEDSGIFQCFASNEGGEVQTHTYLD 456

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V   AP  T+ P D    DG T VL C V GAPKP + W      L  G     R+ +LE
Sbjct: 457 VTNIAPAFTQRPVDTTVTDGMTAVLRCEVSGAPKPAITWKRGNHILASGSVRIPRFMLLE 516

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L+I  V   D+G YTC+A N   +   S  LTV   T I   PED  V  G +AT  
Sbjct: 517 SGGLRIAPVFIQDAGNYTCYAANTEASVNASAMLTVWNRTSIVHPPEDRVVIKGTTATLC 576

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A  DP   L  VW + +  I   S  R V   D SL ++++   D G YTC   +E  
Sbjct: 577 CGATHDPRTSLRYVWKKDNVVITASSSSRIVVEKDGSLVISQTWSGDIGDYTCEIISEGG 636

Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
                A L V + L  P    L  +  A+   V+ + V P         Y VQ  +E + 
Sbjct: 637 SDSRTARLEV-IELPHPPQNLLASLSPARSHSVTLSWVRPFDGNSPVLYYIVQV-SENNS 694

Query: 449 EGSIRELIVNKG-ESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGT 506
              +   + N G E T   V    PA     RV A N    G  S E    + PE  P  
Sbjct: 695 PWKVH--LSNVGPEMTGVTVSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSA 752

Query: 507 -VQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
             +++ A    + +  ++W  P +   NGVL GY ++Y+ + G    P   +   IS P 
Sbjct: 753 PPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYR-LAGL---PGEHQQRNISSPE 808

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEGRGSTPNNL 618
                +  L   T+Y I +A Y  AG G  S+      L  VP   P NV+        +
Sbjct: 809 VNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQAEAVNSTTV 868

Query: 619 VISWTAMPEIEHNAPHFKYRIF 640
              W   P+   N  +  Y++ 
Sbjct: 869 HFLWNPPPQQFINGINQGYKLL 890



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 175/692 (25%), Positives = 272/692 (39%), Gaps = 92/692 (13%)

Query: 35  QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV 94
           Q+    +   AL N    + C     P PQ  W ++G  I PS RI+       L+I   
Sbjct: 180 QRKTVSQGHAALLNLLPIVSC-----PQPQVTWFREGHKIIPSSRIAI-TLENQLVILAT 233

Query: 95  EFSDQGSYTCEVSN-GVGEAK-SYSIDLSV--------LAAPYFTVEP--EFINAAEEET 142
             SD G+Y  +  N   GE K S  I LSV          AP   V P    + A   ET
Sbjct: 234 TASDAGAYYVQAVNEKNGENKTSPFIHLSVARDTGTHEAMAPIIVVAPGNRSVVAGSSET 293

Query: 143 VTFECKASGLP--EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
            T EC A+  P  E  +HW  NG  ++    +  R     R+TI N   +DTG Y C AT
Sbjct: 294 -TLECIANARPVEELSVHWKRNGVRLTSGLHSYGR-----RLTITNPTSADTGMYVCEAT 347

Query: 201 ---NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ 256
              ++        +++++   P  T  P+     +  +T+ + CR  G P P + W  + 
Sbjct: 348 LRGSTFEPARARAFLSII-EPPYFTAEPESRILGEVEETMDIPCRAMGVPLPTLQWYKDA 406

Query: 257 ---KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHITD 312
               +L   RY +L +G L I  ++  DSG + CFA N+ G  Q    L V       T 
Sbjct: 407 VPLSKLQNPRYKVLPSGGLHIQKLSPEDSGIFQCFASNEGGEVQTHTYLDVTNIAPAFTQ 466

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTK 370
           +P D  V  G +A  RC     P  K +I W RG+  +   S   PRF+      L +  
Sbjct: 467 RPVDTTVTDGMTAVLRCEVSGAP--KPAITWKRGNHILASGSVRIPRFMLLESGGLRIAP 524

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTV---QVPLEAPSNFTLIQVIDAKKAV-VSWNPV 426
               D+G YTC A      + A A LTV      +  P +  +I+   A      + +P 
Sbjct: 525 VFIQDAGNYTCYAANTEASVNASAMLTVWNRTSIVHPPEDRVVIKGTTATLCCGATHDPR 584

Query: 427 SPQSLRGHFRGYKV--------QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFA 478
           +  SLR  ++   V        +   EKDG   I +         T E+     +    A
Sbjct: 585 T--SLRYVWKKDNVVITASSSSRIVVEKDGSLVISQTWSGDIGDYTCEIISEGGSDSRTA 642

Query: 479 RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
           R+      +  PP  +++ ++P                S +  L WV+P   N  ++ Y 
Sbjct: 643 RLEVIELPH--PPQNLLASLSPA--------------RSHSVTLSWVRPFDGNSPVLYYI 686

Query: 539 IKYQ------SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG- 591
           ++         V  + VGP +           T   ++GL P+  Y+  +    + G G 
Sbjct: 687 VQVSENNSPWKVHLSNVGPEM-----------TGVTVSGLTPARTYQFRVCAVNQVGKGQ 735

Query: 592 --AESKYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
              E+  L      P   P N+   G T  ++++ W   PE EHN     Y + +R    
Sbjct: 736 YSTETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGL 795

Query: 647 GEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
                Q ++     +  ++ +   +  YEI+V
Sbjct: 796 PGEHQQRNISSPEVNYCLVTDLIIWTQYEIQV 827



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 99/238 (41%), Gaps = 19/238 (7%)

Query: 389  FIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
            F  A    T+Q VP   P N    + +++      WNP   Q + G  +GYK+  W    
Sbjct: 838  FSRAVTEYTLQGVPTAPPQNVQ-AEAVNSTTVHFLWNPPPQQFINGINQGYKLLAWPADA 896

Query: 448  GEG----SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGV 503
             E     +I            T + KF   +  F  VL F    +GPPS      T E  
Sbjct: 897  PETVTVVTIAPDFHGIHHGYITNLKKF---TAYFTSVLCFTTPGDGPPSSPQLVWTHEDK 953

Query: 504  PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
            PG V  L    +  ++  + W +P + NG++MGY+I ++       G    RL +  + T
Sbjct: 954  PGAVGHLSFTEILDTSLKVSWQEPLERNGIIMGYQISWEV-----YGRNDSRLTHTLNST 1008

Query: 564  TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVIS 621
                K+ GL   T Y I +A  T AG G  +     +    P ++ G    P+NLVIS
Sbjct: 1009 MHEYKIQGLSSLTTYTIDVAALTAAGVGVTTSST--ISSGVPPDLPG---APSNLVIS 1061



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 8/158 (5%)

Query: 391  EAQATLTVQV------PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWT 444
            E+ A++ V+V      P  AP N   +  + A +  V+W+P  P+S  G+ +GYKV  W 
Sbjct: 1667 ESPASVPVEVFVGEAAPAMAPQNVQ-VTPLTASQLEVTWDPPPPESQNGNIQGYKVYYW- 1724

Query: 445  EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVP 504
            E D      ++ V        ++      +K    + AFN A +GP S+     T +  P
Sbjct: 1725 EADSRNETEKMKVLFLPEPVVKIKDLTSHTKYLISISAFNAAGDGPKSDPCQGRTHQAAP 1784

Query: 505  GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
            G    L    + S+   + W +P   NG+L GY++ Y+
Sbjct: 1785 GPPSFLAFSEITSTTLNVSWGEPSAANGILQGYRVVYE 1822



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 101/275 (36%), Gaps = 29/275 (10%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           APYF  EP       E   +   C A G    E  W+ N   ++             +  
Sbjct: 85  APYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWIRNDSELTT-------YSSEYKYI 137

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR-V 242
           I +L+K D G Y C   N +G + +      +A+     +  + +    G   +L    +
Sbjct: 138 IPSLQKLDAGFYRCVVRNRMGALLQRKSEIQVAYMGNFMDTDQRKTVSQGHAALLNLLPI 197

Query: 243 FGAPKPEVNWIH-NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNK--------- 292
              P+P+V W     K +   R  I     L I     +D+G Y   A N+         
Sbjct: 198 VSCPQPQVTWFREGHKIIPSSRIAITLENQLVILATTASDAGAYYVQAVNEKNGENKTSP 257

Query: 293 ---LGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSE 348
              L  A+ +G+        I   P +  V AG S  T  C A + P  +LS+ W R   
Sbjct: 258 FIHLSVARDTGTHEAMAPI-IVVAPGNRSVVAGSSETTLECIANARPVEELSVHWKRNG- 315

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            +   S    + S    LT+T  +  D+G Y C A
Sbjct: 316 -VRLTSG---LHSYGRRLTITNPTSADTGMYVCEA 346



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 12/208 (5%)

Query: 397  TVQVPLE-APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIR 453
            T+Q P + AP++ T ++        + W P+      G+    GY+V+ W       ++ 
Sbjct: 1150 TLQAPPDVAPTSLT-VRTASETSLRLRWVPLPDSQYNGNPESVGYRVKYWRSDQPSSALA 1208

Query: 454  ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEA 512
            +++ ++ E   T +++    ++   R+ AFN    GP SE++   T E VP    +++ A
Sbjct: 1209 QVVSDRLERELT-IEELEEWTEYELRMQAFNAIGAGPWSELVRGRTRESVPSAAPENVSA 1267

Query: 513  IPLGSSAFYLKWVK-PEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
              + S+   L W   PEQ  NG+++GYK+ Y   K     P   R   +    T SA LA
Sbjct: 1268 EAVSSTQILLTWASVPEQDQNGLILGYKVLY-CAKDLDPEP---RSHVVRGNHTQSALLA 1323

Query: 571  GLEPSTKYRIHLAGYTKAGDGAESKYLF 598
            GL     Y + +  +T+ G+G  S  L 
Sbjct: 1324 GLRKFVVYELQVLAFTRIGNGVPSSPLI 1351



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 21/200 (10%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V  Q   G   GYKV  +  KD +   R  +V  
Sbjct: 1257 VPSAAPENVS-AEAVSSTQILLTWASVPEQDQNGLILGYKV-LYCAKDLDPEPRSHVVRG 1314

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNG-PPSEIISFVTPEGVPGTVQSLEAIPLGSS 518
              + +  +           +VLAF    NG P S +I   T +  PG    L    +  +
Sbjct: 1315 NHTQSALLAGLRKFVVYELQVLAFTRIGNGVPSSPLILERTKDDTPGPPVRLVFPEVRLT 1374

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGT-------KVGPLLERLPYISDPTTTSAKLAG 571
            A  + W  PE+PNGV++GY+I Y+   G+       +VG  + +         T+ +LA 
Sbjct: 1375 AVRIVWQPPEEPNGVILGYQIAYRLASGSPHTFTTVEVGATVRQF--------TATELA- 1425

Query: 572  LEPSTKYRIHLAGYTKAGDG 591
              P + Y   L+  T+ G G
Sbjct: 1426 --PESAYIFRLSAKTRQGWG 1443



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 33/234 (14%)

Query: 388  DF-IEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE 445
            DF  E +A  T+Q VP E P + +      +   ++ W P   +SL G  +GY++  + E
Sbjct: 1545 DFSAETEAVTTLQDVPGEPPGSVSATPHTTSS-VLIQWQPPRDESLNGLLQGYRIY-YRE 1602

Query: 446  KDGE-------GSIRELIVNKGESTTTEVDKFVPAS-----------KNFARVLAFNGAY 487
             + E        +++     + E T     K V +S           K + R      AY
Sbjct: 1603 LESETGMSPEPKTLKSPSALRAELTAQSSFKTVNSSSSLTTYELTHLKKYRRYEVIMTAY 1662

Query: 488  N----GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIK 540
            N     P S  +     E  P    Q+++  PL +S   + W    PE  NG + GYK+ 
Sbjct: 1663 NIIGESPASVPVEVFVGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKVY 1722

Query: 541  YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y           ++ L ++ +P     K+  L   TKY I ++ +  AGDG +S
Sbjct: 1723 YWEADSRNETEKMKVL-FLPEPV---VKIKDLTSHTKYLISISAFNAAGDGPKS 1772



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 64/167 (38%), Gaps = 10/167 (5%)

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
           TE    +  ++G  +VLTC   G+   E  WI N  ELT    T        I  +   D
Sbjct: 90  TEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWIRNDSELT----TYSSEYKYIIPSLQKLD 145

Query: 282 SGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR-CNAVSDPSLKL 339
           +G Y C  RN++G   Q    + V    +  D  +   V  G +A       VS P  + 
Sbjct: 146 AGFYRCVVRNRMGALLQRKSEIQVAYMGNFMDTDQRKTVSQGHAALLNLLPIVSCP--QP 203

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
            + W R    I   S       N   +  T +S  D+G Y  +A  E
Sbjct: 204 QVTWFREGHKIIPSSRIAITLENQLVILATTAS--DAGAYYVQAVNE 248


>gi|38614294|gb|AAH60237.1| Sdk1 protein, partial [Mus musculus]
          Length = 2159

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 191/622 (30%), Positives = 272/622 (43%), Gaps = 38/622 (6%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
           + V   + +  L CI    P+ +    W ++GV      R++ G  +YG+ L I +   +
Sbjct: 250 RSVVAGSSETTLECIANARPVEELSVHWKRNGV------RLTSGLHSYGRRLTITNPTSA 303

Query: 98  DQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPE 154
           D G Y CE +      E       LS++  PYFT EPE  I    EET+   C+A G+P 
Sbjct: 304 DTGMYVCEATLRGSTFEPARARAFLSIIEPPYFTAEPESRILGEVEETMDIPCRAMGVPL 363

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P + W  +  P+S+   NPR KV P+  + I+ L   D+G + C A+N  G V    Y++
Sbjct: 364 PTLQWYKDAVPLSKLQ-NPRYKVLPSGGLHIQKLSPEDSGIFQCFASNEGGEVQTHTYLD 422

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V   AP  T+ P D    DG T VL C V GAPKP + W      L  G     R+ +LE
Sbjct: 423 VTNIAPAFTQRPVDTTVTDGMTAVLRCEVSGAPKPAITWKRGNHILASGSVRIPRFMLLE 482

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L+I  V   D+G YTC+A N   +   S  LTV   T I   PED  V  G +AT  
Sbjct: 483 SGGLRIAPVFIQDAGNYTCYAANTEASVNASAMLTVWNRTSIVHPPEDRVVIKGTTATLC 542

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A  DP   L  VW + +  I   S  R V   D SL ++++   D G YTC   +E  
Sbjct: 543 CGATHDPRTSLRYVWKKDNVVITASSSSRIVVEKDGSLVISQTWSGDIGDYTCEIISEGG 602

Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
                A L V + L  P    L  +  A+   V+ + V P         Y VQ  +E + 
Sbjct: 603 SDSRTARLEV-IELPHPPQNLLASLSPARSHSVTLSWVRPFDGNSPVLYYIVQV-SENNS 660

Query: 449 EGSIRELIVNKG-ESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGT 506
              +   + N G E T   V    PA     RV A N    G  S E    + PE  P  
Sbjct: 661 PWKVH--LSNVGPEMTGVTVSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSA 718

Query: 507 -VQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
             +++ A    + +  ++W  P +   NGVL GY ++Y+ + G    P   +   IS P 
Sbjct: 719 PPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYR-LAGL---PGEHQQRNISSPE 774

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEGRGSTPNNL 618
                +  L   T+Y I +A Y  AG G  S+      L  VP   P NV+        +
Sbjct: 775 VNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQAEAVNSTTV 834

Query: 619 VISWTAMPEIEHNAPHFKYRIF 640
              W   P+   N  +  Y++ 
Sbjct: 835 HFLWNPPPQQFINGINQGYKLL 856



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 170/666 (25%), Positives = 264/666 (39%), Gaps = 87/666 (13%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN-GVGEAK-SYSI 118
           P PQ  W ++G  I PS RI+       L+I     SD G+Y  +  N   GE K S  I
Sbjct: 167 PQPQVTWFREGHKIIPSSRIAI-TLENQLVILATTASDAGAYYVQAVNEKNGENKTSPFI 225

Query: 119 DLSV--------LAAPYFTVEP--EFINAAEEETVTFECKASGLP--EPEIHWVHNGKPI 166
            LSV          AP   V P    + A   ET T EC A+  P  E  +HW  NG  +
Sbjct: 226 HLSVARDTGTHEAMAPIIVVAPGNRSVVAGSSET-TLECIANARPVEELSVHWKRNGVRL 284

Query: 167 SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT---NSLGYVYKDVYVNVLAHAPEITE 223
           +    +  R     R+TI N   +DTG Y C AT   ++        +++++   P  T 
Sbjct: 285 TSGLHSYGR-----RLTITNPTSADTGMYVCEATLRGSTFEPARARAFLSII-EPPYFTA 338

Query: 224 APKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITDVAF 279
            P+     +  +T+ + CR  G P P + W  +     +L   RY +L +G L I  ++ 
Sbjct: 339 EPESRILGEVEETMDIPCRAMGVPLPTLQWYKDAVPLSKLQNPRYKVLPSGGLHIQKLSP 398

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKE-HTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            DSG + CFA N+ G  Q    L V       T +P D  V  G +A  RC     P  K
Sbjct: 399 EDSGIFQCFASNEGGEVQTHTYLDVTNIAPAFTQRPVDTTVTDGMTAVLRCEVSGAP--K 456

Query: 339 LSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            +I W RG+  +   S   PRF+      L +      D+G YTC A      + A A L
Sbjct: 457 PAITWKRGNHILASGSVRIPRFMLLESGGLRIAPVFIQDAGNYTCYAANTEASVNASAML 516

Query: 397 TV---QVPLEAPSNFTLIQVIDAKKAV-VSWNPVSPQSLRGHFRGYKV--------QTWT 444
           TV      +  P +  +I+   A      + +P +  SLR  ++   V        +   
Sbjct: 517 TVWNRTSIVHPPEDRVVIKGTTATLCCGATHDPRT--SLRYVWKKDNVVITASSSSRIVV 574

Query: 445 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVP 504
           EKDG   I +         T E+     +    AR+      +  PP  +++ ++P    
Sbjct: 575 EKDGSLVISQTWSGDIGDYTCEIISEGGSDSRTARLEVIELPH--PPQNLLASLSPA--- 629

Query: 505 GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ------SVKGTKVGPLLERLPY 558
                       S +  L WV+P   N  ++ Y ++         V  + VGP +     
Sbjct: 630 -----------RSHSVTLSWVRPFDGNSPVLYYIVQVSENNSPWKVHLSNVGPEM----- 673

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG---AESKYLFY---VPFKNPDNVEGRG 612
                 T   ++GL P+  Y+  +    + G G    E+  L      P   P N+   G
Sbjct: 674 ------TGVTVSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVASG 727

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
            T  ++++ W   PE EHN     Y + +R         Q ++     +  ++ +   + 
Sbjct: 728 RTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEHQQRNISSPEVNYCLVTDLIIWT 787

Query: 673 PYEIKV 678
            YEI+V
Sbjct: 788 QYEIQV 793



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 100/238 (42%), Gaps = 19/238 (7%)

Query: 389  FIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
            F  A    T+Q VP   P N    + +++      WNP   Q + G  +GYK+  W    
Sbjct: 804  FSRAVTEYTLQGVPTAPPQNVQ-AEAVNSTTVHFLWNPPPQQFINGINQGYKLLAWPADA 862

Query: 448  GEG----SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGV 503
             E     +I            T + KF   +  F  VL F    +GPPS      T E  
Sbjct: 863  PETVTVVTIAPDFHGIHHGYITNLKKF---TAYFTSVLCFTTPGDGPPSSPQLVWTHEDK 919

Query: 504  PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
            PG V  L    +  ++  + W +P + NG++MGY+I ++ V G        RL +  + T
Sbjct: 920  PGAVGHLSFTEILDTSLKVSWQEPLERNGIIMGYQISWE-VYGRND----SRLTHTLNST 974

Query: 564  TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVIS 621
                K+ GL   T Y I +A  T AG G  +     +    P ++ G    P+NLVIS
Sbjct: 975  MHEYKIQGLSSLTTYTIDVAALTAAGVGVTTSST--ISSGVPPDLPG---APSNLVIS 1027



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 8/158 (5%)

Query: 391  EAQATLTVQV------PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWT 444
            E+ A++ V+V      P  AP N   +  + A +  V+W+P  P+S  G+ +GYKV  W 
Sbjct: 1633 ESPASVPVEVFVGEAAPAMAPQNVQ-VTPLTASQLEVTWDPPPPESQNGNIQGYKVYYW- 1690

Query: 445  EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVP 504
            E D      ++ V        ++      +K    + AFN A +GP S+     T +  P
Sbjct: 1691 EADSRNETEKMKVLFLPEPVVKIKDLTSHTKYLISISAFNAAGDGPKSDPCQGRTHQAAP 1750

Query: 505  GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
            G    L    + S+   + W +P   NG+L GY++ Y+
Sbjct: 1751 GPPSFLAFSEITSTTLNVSWGEPSAANGILQGYRVVYE 1788



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 101/275 (36%), Gaps = 29/275 (10%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           APYF  EP       E   +   C A G    E  W+ N   ++             +  
Sbjct: 51  APYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWIRNDSELTT-------YSSEYKYI 103

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR-V 242
           I +L+K D G Y C   N +G + +      +A+     +  + +    G   +L    +
Sbjct: 104 IPSLQKLDAGFYRCVVRNRMGALLQRKSEIQVAYMGNFMDTDQRKTVSQGHAALLNLLPI 163

Query: 243 FGAPKPEVNWIH-NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNK--------- 292
              P+P+V W     K +   R  I     L I     +D+G Y   A N+         
Sbjct: 164 VSCPQPQVTWFREGHKIIPSSRIAITLENQLVILATTASDAGAYYVQAVNEKNGENKTSP 223

Query: 293 ---LGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSE 348
              L  A+ +G+        I   P +  V AG S  T  C A + P  +LS+ W R   
Sbjct: 224 FIHLSVARDTGTHEAMAPI-IVVAPGNRSVVAGSSETTLECIANARPVEELSVHWKRNG- 281

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            +   S    + S    LT+T  +  D+G Y C A
Sbjct: 282 -VRLTSG---LHSYGRRLTITNPTSADTGMYVCEA 312



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 12/208 (5%)

Query: 397  TVQVPLE-APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIR 453
            T+Q P + AP++ T ++        + W P+      G+    GY+V+ W       ++ 
Sbjct: 1116 TLQAPPDVAPTSLT-VRTASETSLRLRWVPLPDSQYNGNPESVGYRVKYWRSDQPSSALA 1174

Query: 454  ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEA 512
            +++ ++ E   T +++    ++   R+ AFN    GP SE++   T E VP    +++ A
Sbjct: 1175 QVVSDRLERELT-IEELEEWTEYELRMQAFNAIGAGPWSELVRGRTRESVPSAAPENVSA 1233

Query: 513  IPLGSSAFYLKWVK-PEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
              + S+   L W   PEQ  NG+++GYK+ Y   K     P   R   +    T SA LA
Sbjct: 1234 EAVSSTQILLTWASVPEQDQNGLILGYKVLY-CAKDLDPEP---RSHVVRGNHTQSALLA 1289

Query: 571  GLEPSTKYRIHLAGYTKAGDGAESKYLF 598
            GL     Y + +  +T+ G+G  S  L 
Sbjct: 1290 GLRKFVVYELQVLAFTRIGNGVPSSPLI 1317



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 21/200 (10%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V  Q   G   GYKV  +  KD +   R  +V  
Sbjct: 1223 VPSAAPENVS-AEAVSSTQILLTWASVPEQDQNGLILGYKV-LYCAKDLDPEPRSHVVRG 1280

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNG-PPSEIISFVTPEGVPGTVQSLEAIPLGSS 518
              + +  +           +VLAF    NG P S +I   T +  PG    L    +  +
Sbjct: 1281 NHTQSALLAGLRKFVVYELQVLAFTRIGNGVPSSPLILERTKDDTPGPPVRLVFPEVRLT 1340

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGT-------KVGPLLERLPYISDPTTTSAKLAG 571
            A  + W  PE+PNGV++GY+I Y+   G+       +VG  + +         T+ +LA 
Sbjct: 1341 AVRIVWQPPEEPNGVILGYQIAYRLASGSPHTFTTVEVGATVRQF--------TATELA- 1391

Query: 572  LEPSTKYRIHLAGYTKAGDG 591
              P + Y   L+  T+ G G
Sbjct: 1392 --PESAYIFRLSAKTRQGWG 1409



 Score = 47.8 bits (112), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 33/234 (14%)

Query: 388  DF-IEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE 445
            DF  E +A  T+Q VP E P + +      +   ++ W P   +SL G  +GY++  + E
Sbjct: 1511 DFSAETEAVTTLQDVPGEPPGSVSATPHTTSS-VLIQWQPPRDESLNGLLQGYRIY-YRE 1568

Query: 446  KDGE-------GSIRELIVNKGESTTTEVDKFVPAS-----------KNFARVLAFNGAY 487
             + E        +++     + E T     K V +S           K + R      AY
Sbjct: 1569 LESETGMSPEPKTLKSPSALRAELTAQSSFKTVNSSSSLTTYELTHLKKYRRYEVIMTAY 1628

Query: 488  N----GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIK 540
            N     P S  +     E  P    Q+++  PL +S   + W    PE  NG + GYK+ 
Sbjct: 1629 NIIGESPASVPVEVFVGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKVY 1688

Query: 541  YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y           ++ L ++ +P     K+  L   TKY I ++ +  AGDG +S
Sbjct: 1689 YWEADSRNETEKMKVL-FLPEPV---VKIKDLTSHTKYLISISAFNAAGDGPKS 1738



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 64/167 (38%), Gaps = 10/167 (5%)

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
           TE    +  ++G  +VLTC   G+   E  WI N  ELT    T        I  +   D
Sbjct: 56  TEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWIRNDSELT----TYSSEYKYIIPSLQKLD 111

Query: 282 SGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR-CNAVSDPSLKL 339
           +G Y C  RN++G   Q    + V    +  D  +   V  G +A       VS P  + 
Sbjct: 112 AGFYRCVVRNRMGALLQRKSEIQVAYMGNFMDTDQRKTVSQGHAALLNLLPIVSCP--QP 169

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
            + W R    I   S       N   +  T +S  D+G Y  +A  E
Sbjct: 170 QVTWFREGHKIIPSSRIAITLENQLVILATTAS--DAGAYYVQAVNE 214


>gi|338723809|ref|XP_001491938.3| PREDICTED: neuronal cell adhesion molecule isoform 1 [Equus
           caballus]
          Length = 1211

 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 165/524 (31%), Positives = 242/524 (46%), Gaps = 38/524 (7%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           LR   + L CI  G P P   W K DG +PIN   R    N+ K+L I  V  +D G+Y 
Sbjct: 283 LRGNVLSLECIAEGLPTPIIYWIKEDGTLPIN---RTFYRNFKKTLQILQVSEADSGNYQ 339

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A  ++I ++V AAPY+ + P+ +  +  E  T  C+A+G P+P I W+ NG
Sbjct: 340 CIAKNALG-AIHHTISVTVKAAPYWIMAPQNLVLSPGEDGTLICRANGKPKPRISWLSNG 398

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I  
Sbjct: 399 VPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT 458

Query: 224 APKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFA 280
           +    Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I      
Sbjct: 459 SANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALREDIYVLHENGTLEIPVAQKD 518

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G + +F C    D +L  +
Sbjct: 519 STGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTPT 578

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           + WL+ +   +  ++ RF    D+ L VT  S+ D G YTC A T LD + A A L V  
Sbjct: 579 VTWLKDNG--ELPNDGRFTVDKDH-LVVTDVSDDDGGTYTCVANTTLDTVSASAVLRVVA 635

Query: 401 PLEAPS----------NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG 450
           P   P+          +  L   +D K   +SW P    +       + ++        G
Sbjct: 636 PTPTPAPIYDVPNPPFDLELTDQLD-KSVQLSWTPGDDNN--SPITKFIIEYEDAMHEAG 692

Query: 451 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPG 505
                    G  TT ++ K  P      RV+A N      PSE     +     P+  P 
Sbjct: 693 LWHHQTEVSGTQTTAQL-KLSPYVNYSFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPT 751

Query: 506 TVQSLEAIPLGSSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
            V+ L + P       + W KP    + NG  + YK+ ++   G
Sbjct: 752 AVEGLGSEP---DNLVITW-KPLNGFESNGPGLQYKVSWRQKDG 791



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 149/601 (24%), Positives = 251/601 (41%), Gaps = 55/601 (9%)

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEE----TVTFECKASGLPEPEIHWVH 161
           ++  + + + Y +  S    P F + PE   + +EE     ++ EC A GLP P I+W+ 
Sbjct: 248 IAANLSDTEFYGVKSSRERPPTF-LTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWIK 306

Query: 162 NGK--PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
                PI++      +K     + I  + ++D+GNY C A N+LG ++  + V V A AP
Sbjct: 307 EDGTLPINRTFYRNFKKT----LQILQVSEADSGNYQCIAKNALGAIHHTISVTVKA-AP 361

Query: 220 EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TD 276
               AP++     G+   L CR  G PKP ++W+ N    E+     +    GD  I ++
Sbjct: 362 YWIMAPQNLVLSPGEDGTLICRANGKPKPRISWLSNGVPIEIAPDDPSRKIDGDTIIFSN 421

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSD 334
           V    S  Y C A N+ G    +  + V       +T     Y+V A + A   C     
Sbjct: 422 VQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTSANTLYQVIANRPALLDCAFFGS 481

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           P    +I W +G++      E  +V   + +L +  + +  +G YTC A+ +L   + + 
Sbjct: 482 P--LPTIEWFKGAKGSALR-EDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEV 538

Query: 395 TLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE-G 450
            L ++ P   ++ P  + ++Q    + + VS+       ++         TW + +GE  
Sbjct: 539 HLEIKDPTRIIKQPE-YAVVQ----RGSTVSFE----CKVKHDHTLTPTVTWLKDNGELP 589

Query: 451 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSL 510
           +     V+K     T+V             +A         S ++  V P   P  +  +
Sbjct: 590 NDGRFTVDKDHLVVTDVSD---DDGGTYTCVANTTLDTVSASAVLRVVAPTPTPAPIYDV 646

Query: 511 EAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
              P           +  L W   +  N  +  + I+Y+         L      +S  T
Sbjct: 647 PNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYED--AMHEAGLWHHQTEVSG-T 703

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNN 617
            T+A+L  L P   Y   +      G      A  +YL     P KNP  VEG GS P+N
Sbjct: 704 QTTAQLK-LSPYVNYSFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDN 762

Query: 618 LVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIK 677
           LVI+W  +   E N P  +Y++ WR+ +  + W    VL    S+ +++  PTF PY IK
Sbjct: 763 LVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS--VLVANVSKYIVSGTPTFVPYLIK 820

Query: 678 V 678
           V
Sbjct: 821 V 821



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 150/613 (24%), Positives = 235/613 (38%), Gaps = 77/613 (12%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 380 LICRANGKPKPRISWLSNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T                +C   G P P I W    K 
Sbjct: 436 NEYGYLLANAF-VNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 493

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 494 -GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQ 551

Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P+      G TV   C+V       P V W+ +  EL   GR+T+ +   L +TDV+  D
Sbjct: 552 PEYAVVQRGSTVSFECKVKHDHTLTPTVTWLKDNGELPNDGRFTV-DKDHLVVTDVSDDD 610

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHT-------HITDQPEDYEVEAGQSATFRCNAVSD 334
            G YTC A   L T   S  L V   T        + + P D E+              D
Sbjct: 611 GGTYTCVANTTLDTVSASAVLRVVAPTPTPAPIYDVPNPPFDLELTDQL----------D 660

Query: 335 PSLKLSIVWLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
            S++LS  W  G +   PI     E E    ++  +      S    + Q          
Sbjct: 661 KSVQLS--WTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTEVSGTQTTAQLKLSPYVNYS 718

Query: 389 F-IEAQATLTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGH 434
           F + A  +L   +P EA   +           T ++ + ++    V++W P++     G 
Sbjct: 719 FRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGP 778

Query: 435 FRGYKVQTWTEKDGEGS-IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
              YKV +W +KDG+      L+ N  +   +    FVP      +V A N     P   
Sbjct: 779 GLQYKV-SWRQKDGDDEWTSVLVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPA 834

Query: 494 IISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--K 548
           ++   + E +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +
Sbjct: 835 VVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQTSPKR 894

Query: 549 VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDN 607
               +E+       + T   L GLEP + Y +++      G+G A S  +F  P      
Sbjct: 895 NRRHIEKKILTFQGSKTHGMLPGLEPFSHYILNVRVVNGKGEGPASSDRVFNTP------ 948

Query: 608 VEGRGSTPNNLVI 620
            EG  S P++L I
Sbjct: 949 -EGVPSAPSSLKI 960



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 844  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQTSPKRNRRHIEKK 902

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 903  ILTFQGSKTHGMLPGLEPFSHYILNVRVVNGKGEGPASSDRVFNTPEGVPSAPSSLKIVN 962

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y ++YQ +  T ++GP+++ ++P       T   L  L
Sbjct: 963  PTLDSLTLEWDPPSHPNGILTEYTLRYQPINSTHELGPVVDLKIPA----NKTRWTLKNL 1018

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1019 NFSTRYKFYFYAQTSAGSGSQ 1039



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 128/315 (40%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   +TI  +   K++T  G Y
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGSGTLTINIMSEGKAETYEGVY 121

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVN-WI 253
            C A N  G    +  V   + +P  T+   +  T+ +G+ +VL C       P +  W+
Sbjct: 122 QCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLRNGQALVLPCSPPIGLPPPIIFWM 181

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVKE--- 306
            N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK    
Sbjct: 182 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISV 241

Query: 307 -------HTHITD-----------QPEDYEVEAGQSAT---FRCNAVSDPSLKLS----- 340
                    +++D           +P  +    G ++     R N +S   +        
Sbjct: 242 DELNDTIAANLSDTEFYGVKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPI 301

Query: 341 IVWLR--GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W++  G+ PI+      F ++   +L + + SE DSG Y C A+  L  I    ++TV
Sbjct: 302 IYWIKEDGTLPINR----TFYRNFKKTLQILQVSEADSGNYQCIAKNALGAIHHTISVTV 357

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 358 KAAPYWIMAPQNLVL 372


>gi|350588954|ref|XP_003130319.3| PREDICTED: neuronal cell adhesion molecule isoform 1 [Sus scrofa]
          Length = 1304

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 141/402 (35%), Positives = 203/402 (50%), Gaps = 25/402 (6%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEF 96
           +RK+E  LR   + L CI  G P P   W K DG +PIN   R    N+ K+L I  V  
Sbjct: 278 SRKEE--LRGNVLSLECIAEGLPTPIIYWIKEDGTLPIN---RTFYRNFKKTLQIIQVTE 332

Query: 97  SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           +D G+Y C   N +G A  ++I ++V AAPY+ + P+ +  +  E  T  C+A+G P+P 
Sbjct: 333 ADSGNYQCIAKNTLG-AIHHTISVTVKAAPYWIIAPQNLVLSPGEDGTLICRANGNPKPR 391

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           I W+ NG PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA
Sbjct: 392 ISWLSNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSSVYQCNASNEYGYLLANAFVNVLA 451

Query: 217 HAPEITEAPKDEYTVDG-KTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLK 273
             P I  +    Y V   +   L C  FG+P P + W    K   L    Y + E G L+
Sbjct: 452 EPPRILTSANTLYQVIADRPAFLDCAFFGSPLPSIEWFKGAKGSALREDIYILHENGTLE 511

Query: 274 ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVS 333
           I       +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G + +F C    
Sbjct: 512 IPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQPEYAVVQRGSTVSFECKVKH 571

Query: 334 DPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393
           D +L L++ WL+     +  S+ RF    D+ L V   ++ D G YTC A T LD + A 
Sbjct: 572 DHTLILTVTWLKDHS--ELPSDGRFTVDKDH-LVVADVNDDDGGTYTCVANTTLDNVSAS 628

Query: 394 ATLTVQVPLEAPS----------NFTLIQVIDAKKAVVSWNP 425
           A L+V  P   P+          +  L   +D +   +SW P
Sbjct: 629 AVLSVVAPTPTPAPIYDVPNPPFDLELTDQLD-RSVQLSWTP 669



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 146/588 (24%), Positives = 243/588 (41%), Gaps = 59/588 (10%)

Query: 124 AAPYFTVEPEFI----NAAEEE-----TVTFECKASGLPEPEIHWVHNGK--PISQAPPN 172
           A P+    P F+    NA+ +E      ++ EC A GLP P I+W+      PI++    
Sbjct: 260 AKPHRERPPTFLTPEGNASRKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYR 319

Query: 173 PRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD 232
             +K     + I  + ++D+GNY C A N+LG ++  + V V A AP    AP++     
Sbjct: 320 NFKKT----LQIIQVTEADSGNYQCIAKNTLGAIHHTISVTVKA-APYWIIAPQNLVLSP 374

Query: 233 GKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI-TDVAFADSGEYTCFA 289
           G+   L CR  G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A
Sbjct: 375 GEDGTLICRANGNPKPRISWLSNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSSVYQCNA 434

Query: 290 RNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS 347
            N+ G    +  + V       +T     Y+V A + A   C     P    SI W +G+
Sbjct: 435 SNEYGYLLANAFVNVLAEPPRILTSANTLYQVIADRPAFLDCAFFGSP--LPSIEWFKGA 492

Query: 348 EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEA 404
           +      +   +  N  +L +  + +  +G YTC A+ +L   + +  L ++ P   ++ 
Sbjct: 493 KGSALREDIYILHENG-TLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQ 551

Query: 405 PSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE-GSIRELIVNKGEST 463
           P  + ++Q    + + VS+       ++         TW +   E  S     V+K    
Sbjct: 552 PE-YAVVQ----RGSTVSFE----CKVKHDHTLILTVTWLKDHSELPSDGRFTVDKDHLV 602

Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLG------- 516
             +V+            +A     N   S ++S V P   P  +  +   P         
Sbjct: 603 VADVND---DDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNPPFDLELTDQL 659

Query: 517 SSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPST 576
             +  L W   +  N  +  + I+Y+ V   + G    +       TT   KL+   P  
Sbjct: 660 DRSVQLSWTPGDDNNSPITKFIIEYEDVM-HEAGLWHHQTEVPGTQTTAQLKLS---PYV 715

Query: 577 KYRIHLAGYTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEH 630
            Y   +      G      A  +YL     P KNP  VEG GS P+NLVI+W  +   E 
Sbjct: 716 NYAFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLSGFES 775

Query: 631 NAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           N P  +Y++ WR+ +  + W    V+    S+ +++  PTF PY +KV
Sbjct: 776 NGPGLQYKVSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLVKV 821



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 98/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 844  LPMVAPGNVR-VSVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSSNRNRRHIEKK 902

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S   +F TPEGVP    SL+ + 
Sbjct: 903  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRAFHTPEGVPSAPSSLKIVN 962

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 963  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLIDLKIPA----NKTRWTLKNL 1018

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1019 NFSTRYKFYFYAQTAAGSGSQ 1039



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 140/606 (23%), Positives = 227/606 (37%), Gaps = 63/606 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 380 LICRANGNPKPRISWLSNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSSVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T          +     +C   G P P I W    K 
Sbjct: 436 NEYGYLLANAF-VNVLAEPPRILTSANTLYQVIADRPAFLDCAFFGSPLPSIEWFKGAK- 493

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 494 -GSALREDIYILHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQ 551

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P+      G TV   C+V         V W+ +  EL + GR+T+ +   L + DV   D
Sbjct: 552 PEYAVVQRGSTVSFECKVKHDHTLILTVTWLKDHSELPSDGRFTV-DKDHLVVADVNDDD 610

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G YTC A   L     S  L+V     +   P    +    +  F           + +
Sbjct: 611 GGTYTCVANTTLDNVSASAVLSV-----VAPTPTPAPIYDVPNPPFDLELTDQLDRSVQL 665

Query: 342 VWLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQA 394
            W  G +   PI     E E    ++  +           + Q          F + A  
Sbjct: 666 SWTPGDDNNSPITKFIIEYEDVMHEAGLWHHQTEVPGTQTTAQLKLSPYVNYAFRVMAVN 725

Query: 395 TLTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQ 441
           +L   +P EA   +           T ++ + ++    V++W P+S     G    YKV 
Sbjct: 726 SLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLSGFESNGPGLQYKV- 784

Query: 442 TWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 500
           +W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + 
Sbjct: 785 SWRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LVKVQALNDVGFAPEPAVVMGHSG 841

Query: 501 EGVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLER 555
           E +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+
Sbjct: 842 EDLPMVAPGNVRVSVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSSNRNRRHIEK 901

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGST 614
                  + T   L GLEP + Y +++      G+G A     F+ P       EG  S 
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRAFHTP-------EGVPSA 954

Query: 615 PNNLVI 620
           P++L I
Sbjct: 955 PSSLKI 960



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 132/315 (41%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   +TI  +   K++T  G Y
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKTGSGTLTINIMSDGKAETYEGVY 121

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +  V   + +P  T+   +  T+  G+++VL CR   G P P + W+
Sbjct: 122 QCTARNERGAAISNNIVIRSSRSPLWTKEKLEPMTLRSGQSLVLPCRPPMGLPPPIIFWM 181

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVKEHT- 308
            N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK  + 
Sbjct: 182 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDAREDYICYARFNHTQTIQQKQPISVKVTSV 241

Query: 309 ---------HITD-----------QPEDY---EVEAGQSATFRCNAVSDPSLKLS----- 340
                    +++D           +P  +   E  A +    R N +S   +        
Sbjct: 242 DELNDTIAANLSDTEFYGAKPHRERPPTFLTPEGNASRKEELRGNVLSLECIAEGLPTPI 301

Query: 341 IVWLR--GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W++  G+ PI+      F ++   +L + + +E DSG Y C A+  L  I    ++TV
Sbjct: 302 IYWIKEDGTLPINR----TFYRNFKKTLQIIQVTEADSGNYQCIAKNTLGAIHHTISVTV 357

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 358 KAAPYWIIAPQNLVL 372



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 64/165 (38%), Gaps = 18/165 (10%)

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHN 255
           C   ++L        +  L   P IT+    +Y +D +  +V+ C   G P P  +W  N
Sbjct: 24  CQMLSALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRN 83

Query: 256 --QKELTGGRYTILETGDLKITDVAFADS------GEYTCFARNKLGTAQGSGSLTVKEH 307
               ++       ++TG   +T    +D       G Y C ARN+ G A  +  +     
Sbjct: 84  GTHFDIDKDPLVTMKTGSGTLTINIMSDGKAETYEGVYQCTARNERGAAISNNIVIRSSR 143

Query: 308 THI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLS---IVWLRGS 347
           + +   ++ E   + +GQS    C     P + L    I W+  S
Sbjct: 144 SPLWTKEKLEPMTLRSGQSLVLPCR----PPMGLPPPIIFWMDNS 184


>gi|350588950|ref|XP_003482752.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Sus scrofa]
          Length = 1211

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/373 (36%), Positives = 194/373 (52%), Gaps = 14/373 (3%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEF 96
           +RK+E  LR   + L CI  G P P   W K DG +PIN   R    N+ K+L I  V  
Sbjct: 278 SRKEE--LRGNVLSLECIAEGLPTPIIYWIKEDGTLPIN---RTFYRNFKKTLQIIQVTE 332

Query: 97  SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           +D G+Y C   N +G A  ++I ++V AAPY+ + P+ +  +  E  T  C+A+G P+P 
Sbjct: 333 ADSGNYQCIAKNTLG-AIHHTISVTVKAAPYWIIAPQNLVLSPGEDGTLICRANGNPKPR 391

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           I W+ NG PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA
Sbjct: 392 ISWLSNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSSVYQCNASNEYGYLLANAFVNVLA 451

Query: 217 HAPEITEAPKDEYTVDG-KTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLK 273
             P I  +    Y V   +   L C  FG+P P + W    K   L    Y + E G L+
Sbjct: 452 EPPRILTSANTLYQVIADRPAFLDCAFFGSPLPSIEWFKGAKGSALREDIYILHENGTLE 511

Query: 274 ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVS 333
           I       +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G + +F C    
Sbjct: 512 IPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQPEYAVVQRGSTVSFECKVKH 571

Query: 334 DPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393
           D +L L++ WL+     +  S+ RF    D+ L V   ++ D G YTC A T LD + A 
Sbjct: 572 DHTLILTVTWLKDHS--ELPSDGRFTVDKDH-LVVADVNDDDGGTYTCVANTTLDNVSAS 628

Query: 394 ATLTVQVPLEAPS 406
           A L+V  P   P+
Sbjct: 629 AVLSVVAPTPTPA 641



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 146/588 (24%), Positives = 243/588 (41%), Gaps = 59/588 (10%)

Query: 124 AAPYFTVEPEFI----NAAEEE-----TVTFECKASGLPEPEIHWVHNGK--PISQAPPN 172
           A P+    P F+    NA+ +E      ++ EC A GLP P I+W+      PI++    
Sbjct: 260 AKPHRERPPTFLTPEGNASRKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYR 319

Query: 173 PRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD 232
             +K     + I  + ++D+GNY C A N+LG ++  + V V A AP    AP++     
Sbjct: 320 NFKKT----LQIIQVTEADSGNYQCIAKNTLGAIHHTISVTVKA-APYWIIAPQNLVLSP 374

Query: 233 GKTVVLTCRVFGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFA 289
           G+   L CR  G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A
Sbjct: 375 GEDGTLICRANGNPKPRISWLSNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSSVYQCNA 434

Query: 290 RNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS 347
            N+ G    +  + V       +T     Y+V A + A   C     P    SI W +G+
Sbjct: 435 SNEYGYLLANAFVNVLAEPPRILTSANTLYQVIADRPAFLDCAFFGSP--LPSIEWFKGA 492

Query: 348 EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEA 404
           +      +   +  N  +L +  + +  +G YTC A+ +L   + +  L ++ P   ++ 
Sbjct: 493 KGSALREDIYILHENG-TLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQ 551

Query: 405 PSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE-GSIRELIVNKGEST 463
           P  + ++Q    + + VS+       ++         TW +   E  S     V+K    
Sbjct: 552 PE-YAVVQ----RGSTVSFE----CKVKHDHTLILTVTWLKDHSELPSDGRFTVDKDHLV 602

Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLG------- 516
             +V+            +A     N   S ++S V P   P  +  +   P         
Sbjct: 603 VADVND---DDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNPPFDLELTDQL 659

Query: 517 SSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPST 576
             +  L W   +  N  +  + I+Y+ V   + G    +       TT   KL+   P  
Sbjct: 660 DRSVQLSWTPGDDNNSPITKFIIEYEDVMH-EAGLWHHQTEVPGTQTTAQLKLS---PYV 715

Query: 577 KYRIHLAGYTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEH 630
            Y   +      G      A  +YL     P KNP  VEG GS P+NLVI+W  +   E 
Sbjct: 716 NYAFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLSGFES 775

Query: 631 NAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           N P  +Y++ WR+ +  + W    V+    S+ +++  PTF PY +KV
Sbjct: 776 NGPGLQYKVSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLVKV 821



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 98/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 844  LPMVAPGNVR-VSVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSSNRNRRHIEKK 902

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S   +F TPEGVP    SL+ + 
Sbjct: 903  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRAFHTPEGVPSAPSSLKIVN 962

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 963  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLIDLKIPA----NKTRWTLKNL 1018

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1019 NFSTRYKFYFYAQTAAGSGSQ 1039



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 140/606 (23%), Positives = 227/606 (37%), Gaps = 63/606 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 380 LICRANGNPKPRISWLSNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSSVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T          +     +C   G P P I W    K 
Sbjct: 436 NEYGYLLANAF-VNVLAEPPRILTSANTLYQVIADRPAFLDCAFFGSPLPSIEWFKGAK- 493

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 494 -GSALREDIYILHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQ 551

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P+      G TV   C+V         V W+ +  EL + GR+T+ +   L + DV   D
Sbjct: 552 PEYAVVQRGSTVSFECKVKHDHTLILTVTWLKDHSELPSDGRFTV-DKDHLVVADVNDDD 610

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G YTC A   L     S  L+V     +   P    +    +  F           + +
Sbjct: 611 GGTYTCVANTTLDNVSASAVLSV-----VAPTPTPAPIYDVPNPPFDLELTDQLDRSVQL 665

Query: 342 VWLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQA 394
            W  G +   PI     E E    ++  +           + Q          F + A  
Sbjct: 666 SWTPGDDNNSPITKFIIEYEDVMHEAGLWHHQTEVPGTQTTAQLKLSPYVNYAFRVMAVN 725

Query: 395 TLTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQ 441
           +L   +P EA   +           T ++ + ++    V++W P+S     G    YKV 
Sbjct: 726 SLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLSGFESNGPGLQYKV- 784

Query: 442 TWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 500
           +W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + 
Sbjct: 785 SWRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LVKVQALNDVGFAPEPAVVMGHSG 841

Query: 501 EGVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLER 555
           E +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+
Sbjct: 842 EDLPMVAPGNVRVSVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSSNRNRRHIEK 901

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGST 614
                  + T   L GLEP + Y +++      G+G A     F+ P       EG  S 
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRAFHTP-------EGVPSA 954

Query: 615 PNNLVI 620
           P++L I
Sbjct: 955 PSSLKI 960



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 132/315 (41%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   +TI  +   K++T  G Y
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKTGSGTLTINIMSDGKAETYEGVY 121

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +  V   + +P  T+   +  T+  G+++VL CR   G P P + W+
Sbjct: 122 QCTARNERGAAISNNIVIRSSRSPLWTKEKLEPMTLRSGQSLVLPCRPPMGLPPPIIFWM 181

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVKEHT- 308
            N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK  + 
Sbjct: 182 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDAREDYICYARFNHTQTIQQKQPISVKVTSV 241

Query: 309 ---------HITD-----------QPEDY---EVEAGQSATFRCNAVSDPSLKLS----- 340
                    +++D           +P  +   E  A +    R N +S   +        
Sbjct: 242 DELNDTIAANLSDTEFYGAKPHRERPPTFLTPEGNASRKEELRGNVLSLECIAEGLPTPI 301

Query: 341 IVWLR--GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W++  G+ PI+      F ++   +L + + +E DSG Y C A+  L  I    ++TV
Sbjct: 302 IYWIKEDGTLPINR----TFYRNFKKTLQIIQVTEADSGNYQCIAKNTLGAIHHTISVTV 357

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 358 KAAPYWIIAPQNLVL 372



 Score = 41.2 bits (95), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 64/165 (38%), Gaps = 18/165 (10%)

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHN 255
           C   ++L        +  L   P IT+    +Y +D +  +V+ C   G P P  +W  N
Sbjct: 24  CQMLSALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRN 83

Query: 256 --QKELTGGRYTILETGDLKITDVAFADS------GEYTCFARNKLGTAQGSGSLTVKEH 307
               ++       ++TG   +T    +D       G Y C ARN+ G A  +  +     
Sbjct: 84  GTHFDIDKDPLVTMKTGSGTLTINIMSDGKAETYEGVYQCTARNERGAAISNNIVIRSSR 143

Query: 308 THI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLS---IVWLRGS 347
           + +   ++ E   + +GQS    C     P + L    I W+  S
Sbjct: 144 SPLWTKEKLEPMTLRSGQSLVLPCR----PPMGLPPPIIFWMDNS 184


>gi|29466306|emb|CAD65848.1| NrCAM protein [Mus musculus]
 gi|162318336|gb|AAI57008.1| Neuron-glia-CAM-related cell adhesion molecule [synthetic
           construct]
 gi|162319098|gb|AAI56236.1| Neuron-glia-CAM-related cell adhesion molecule [synthetic
           construct]
          Length = 1251

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 164/523 (31%), Positives = 241/523 (46%), Gaps = 36/523 (6%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W K DG  + P++R    N+ K+L I HV  +D G+Y C
Sbjct: 272 LRGNVLSLECIAEGLPTPIIYWIKEDG--MLPANRTFYRNFKKTLQITHVSEADSGNYQC 329

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I ++V AAPY+ V P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 330 IAKNALG-AVHHTISVTVKAAPYWIVAPQNLVLSPGENGTLICRANGNPKPRISWLTNGV 388

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  A  +P RK+  + I   N+++S +  Y CNA+N  GY+  + +VNVLA  P I  +
Sbjct: 389 PIEIALDDPSRKIDGDTIIFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILTS 448

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + + G L+I       
Sbjct: 449 ANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALHEDIYVLHDNGTLEIPVAQKDS 508

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L  +I
Sbjct: 509 TGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQPEYAVVQRGSKVSFECRVKHDHTLIPTI 568

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  ++ RF    D+ L V+   + D G YTC A T LD   A A L V  P
Sbjct: 569 MWLKDNG--ELPNDERFSTDKDH-LVVSDVKDDDGGTYTCTANTTLDSASASAVLRVVAP 625

Query: 402 LEAPS----------NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGS 451
              P+          +  L   +D K   ++W P    +       + ++        G 
Sbjct: 626 TPTPAPIYDVPNPPFDLELTNQLD-KSVQLTWTPGDDNN--SPITKFIIEYEDAMHDAGL 682

Query: 452 IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPGT 506
            R      G  TT ++ K  P      RV+A N      PSE     +     P+  P  
Sbjct: 683 WRHQAEVSGTQTTAQL-KLSPYVNYSFRVMAENSIGRSMPSEASEQYLTKAAEPDQNPMA 741

Query: 507 VQSLEAIPLGSSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
           V+ L   P       + W KP    Q NG  + YK+ ++   G
Sbjct: 742 VEGLGTEP---DNLVITW-KPLNGFQSNGPGLQYKVSWRQKDG 780



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 141/564 (25%), Positives = 230/564 (40%), Gaps = 58/564 (10%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W+   K     P N  R    N    + I ++ ++D+GNY C A
Sbjct: 277 LSLECIAEGLPTPIIYWI---KEDGMLPAN--RTFYRNFKKTLQITHVSEADSGNYQCIA 331

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK-- 257
            N+LG V+  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 332 KNALGAVHHTISVTVKA-APYWIVAPQNLVLSPGENGTLICRANGNPKPRISWLTNGVPI 390

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQP 314
           E+     +    GD  I ++V  + S  Y C A NK G    +  + V       +T   
Sbjct: 391 EIALDDPSRKIDGDTIIFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILTSAN 450

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V  ++ +L +  + + 
Sbjct: 451 TLYQVIANRPALLDCAFFGSP--MPTIEWFKGTKGSALH-EDIYVLHDNGTLEIPVAQKD 507

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
            +G YTC A+ +L   + +  L ++ P           +   + AVV          R  
Sbjct: 508 STGTYTCVARNKLGMAKNEVHLEIKDPTRI--------IKQPEYAVVQRGSKVSFECRVK 559

Query: 435 FRGYKVQT--WTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN---- 488
                + T  W + +GE       +   E  +T+ D  V +         +    N    
Sbjct: 560 HDHTLIPTIMWLKDNGE-------LPNDERFSTDKDHLVVSDVKDDDGGTYTCTANTTLD 612

Query: 489 -GPPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIK 540
               S ++  V P   P  +  +   P           +  L W   +  N  +  + I+
Sbjct: 613 SASASAVLRVVAPTPTPAPIYDVPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIE 672

Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKY 596
           Y+         L      +S  T T+A+L  L P   Y   +      G      A  +Y
Sbjct: 673 YED--AMHDAGLWRHQAEVSG-TQTTAQLK-LSPYVNYSFRVMAENSIGRSMPSEASEQY 728

Query: 597 LFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
           L     P +NP  VEG G+ P+NLVI+W  +   + N P  +Y++ WR+ +  + W    
Sbjct: 729 LTKAAEPDQNPMAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTS-- 786

Query: 655 VLDWRQSELVLANQPTFQPYEIKV 678
           V+    S+ +++  PTF PY IKV
Sbjct: 787 VVVANVSKYIVSGTPTFVPYLIKV 810



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV P+S+RGH +GY++  W  +      R  I  K
Sbjct: 833  LPMVAPGNVR-VSVVNSTLAEVHWDPVPPKSVRGHLQGYRIYYWKTQSSSKRNRRHIEKK 891

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 892  ILTFQGTKTHGMLPGLQPYSHYALNVRVVNGKGEGPASTDRGFHTPEGVPSAPSSLKIVN 951

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y ++YQ +  T ++GPL++ ++P       T   L  L
Sbjct: 952  PTLDSLTLEWDPPSHPNGILTEYILQYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 1007

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T  G G++
Sbjct: 1008 NFSTRYKFYFYAQTSVGPGSQ 1028



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 140/607 (23%), Positives = 222/607 (36%), Gaps = 65/607 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+ S    Y C  S
Sbjct: 369 LICRANGNPKPRISWLTNGVPIEIALDDPSRKID----GDTIIFSNVQESSSAVYQCNAS 424

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T                +C   G P P I W   G  
Sbjct: 425 NKYGYLLANAF-VNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPMPTIEWF-KGTK 482

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
            S    +         + I   +K  TG Y C A N LG    +V++ +      I + P
Sbjct: 483 GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQP 541

Query: 226 KDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRYTILETGDLKITDVAFADSG 283
           +      G  V   CRV       P + W+ +  EL        +   L ++DV   D G
Sbjct: 542 EYAVVQRGSKVSFECRVKHDHTLIPTIMWLKDNGELPNDERFSTDKDHLVVSDVKDDDGG 601

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVW 343
            YTC A   L +A  S  L V     +   P    +    +  F     +     + + W
Sbjct: 602 TYTCTANTTLDSASASAVLRV-----VAPTPTPAPIYDVPNPPFDLELTNQLDKSVQLTW 656

Query: 344 LRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQATL 396
             G +   PI     E E     +  +      S    + Q          F + A+ ++
Sbjct: 657 TPGDDNNSPITKFIIEYEDAMHDAGLWRHQAEVSGTQTTAQLKLSPYVNYSFRVMAENSI 716

Query: 397 TVQVPLEAPSNFTLIQV-------------IDAKKAVVSWNPVSPQSLRGHFRGYKVQTW 443
              +P EA   +                   +    V++W P++     G    YKV +W
Sbjct: 717 GRSMPSEASEQYLTKAAEPDQNPMAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKV-SW 775

Query: 444 TEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFV--- 498
            +KDG+     ++V N  +   +    FVP      +V A N     P P+ ++      
Sbjct: 776 RQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAAVMGHSGED 832

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLE 554
            P   PG V+      + S+   + W  V P+   G L GY+I Y   + +  +    +E
Sbjct: 833 LPMVAPGNVR---VSVVNSTLAEVHWDPVPPKSVRGHLQGYRIYYWKTQSSSKRNRRHIE 889

Query: 555 RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGS 613
           +       T T   L GL+P + Y +++      G+G A +   F+ P       EG  S
Sbjct: 890 KKILTFQGTKTHGMLPGLQPYSHYALNVRVVNGKGEGPASTDRGFHTP-------EGVPS 942

Query: 614 TPNNLVI 620
            P++L I
Sbjct: 943 APSSLKI 949



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 128/344 (37%), Gaps = 57/344 (16%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNGKPIS-QAP 170
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 22  ISALDVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKD 81

Query: 171 PNPRRKVGPNRITIENLR--KSDT--GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
           P    K G   + I  +   K++T  G Y C A N  G    +  V   + +P  T+   
Sbjct: 82  PLVTMKPGSGTLVINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKERL 141

Query: 227 DEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKITDVAFADS 282
           +   + +G+++VL CR   G P   + W+ N  Q+     R +    GDL  ++V   D+
Sbjct: 142 EPIVLQNGQSLVLPCRPPIGLPPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDT 201

Query: 283 GE-YTCFAR----------------------------NKLGTAQGSGSLTVKEHTHITDQ 313
            E Y C+AR                              L   +  G+ + KE       
Sbjct: 202 REDYICYARFNHTQTIQQKQPISLKVISVDELNDTIAANLSDTEFYGAKSSKERPPTFLT 261

Query: 314 PEDYEVEA----GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
           PE  E       G   +  C A   P+    I W++  E     +   F ++   +L +T
Sbjct: 262 PEGNESHKEELRGNVLSLECIAEGLPT--PIIYWIK--EDGMLPANRTFYRNFKKTLQIT 317

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             SE DSG Y C A+  L  +    ++TV+     + AP N  L
Sbjct: 318 HVSEADSGNYQCIAKNALGAVHHTISVTVKAAPYWIVAPQNLVL 361


>gi|350588946|ref|XP_003482750.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Sus scrofa]
          Length = 1192

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/373 (36%), Positives = 194/373 (52%), Gaps = 14/373 (3%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEF 96
           +RK+E  LR   + L CI  G P P   W K DG +PIN   R    N+ K+L I  V  
Sbjct: 259 SRKEE--LRGNVLSLECIAEGLPTPIIYWIKEDGTLPIN---RTFYRNFKKTLQIIQVTE 313

Query: 97  SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           +D G+Y C   N +G A  ++I ++V AAPY+ + P+ +  +  E  T  C+A+G P+P 
Sbjct: 314 ADSGNYQCIAKNTLG-AIHHTISVTVKAAPYWIIAPQNLVLSPGEDGTLICRANGNPKPR 372

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           I W+ NG PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA
Sbjct: 373 ISWLSNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSSVYQCNASNEYGYLLANAFVNVLA 432

Query: 217 HAPEITEAPKDEYTVDG-KTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLK 273
             P I  +    Y V   +   L C  FG+P P + W    K   L    Y + E G L+
Sbjct: 433 EPPRILTSANTLYQVIADRPAFLDCAFFGSPLPSIEWFKGAKGSALREDIYILHENGTLE 492

Query: 274 ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVS 333
           I       +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G + +F C    
Sbjct: 493 IPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQPEYAVVQRGSTVSFECKVKH 552

Query: 334 DPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393
           D +L L++ WL+     +  S+ RF    D+ L V   ++ D G YTC A T LD + A 
Sbjct: 553 DHTLILTVTWLKDHS--ELPSDGRFTVDKDH-LVVADVNDDDGGTYTCVANTTLDNVSAS 609

Query: 394 ATLTVQVPLEAPS 406
           A L+V  P   P+
Sbjct: 610 AVLSVVAPTPTPA 622



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 160/658 (24%), Positives = 269/658 (40%), Gaps = 65/658 (9%)

Query: 59  GTPLPQTIWSKDGVPINP-SDRISQGNYGKSLIIKHVEFSDQGSYTCEV----SNGVGEA 113
           G P P   W  +     P S+R+SQG  G       +    +  Y C      +  + + 
Sbjct: 172 GLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDAREDYICYARFNHTQTIQQK 231

Query: 114 KSYSIDLSVLAAPYFTVEPEFI----NAAEEE-----TVTFECKASGLPEPEIHWVHNGK 164
           +  S+ ++  A P+    P F+    NA+ +E      ++ EC A GLP P I+W+    
Sbjct: 232 QPISVKVTS-AKPHRERPPTFLTPEGNASRKEELRGNVLSLECIAEGLPTPIIYWIKEDG 290

Query: 165 --PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
             PI++      +K     + I  + ++D+GNY C A N+LG ++  + V V A AP   
Sbjct: 291 TLPINRTFYRNFKKT----LQIIQVTEADSGNYQCIAKNTLGAIHHTISVTVKA-APYWI 345

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAF 279
            AP++     G+   L CR  G PKP ++W+ N    E+     +    GD  I ++V  
Sbjct: 346 IAPQNLVLSPGEDGTLICRANGNPKPRISWLSNGVPIEIAPDDPSRKIDGDTIIFSNVQE 405

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSL 337
             S  Y C A N+ G    +  + V       +T     Y+V A + A   C     P  
Sbjct: 406 RSSSVYQCNASNEYGYLLANAFVNVLAEPPRILTSANTLYQVIADRPAFLDCAFFGSP-- 463

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
             SI W +G++      +   +  N  +L +  + +  +G YTC A+ +L   + +  L 
Sbjct: 464 LPSIEWFKGAKGSALREDIYILHENG-TLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLE 522

Query: 398 VQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE-GSIR 453
           ++ P   ++ P  + ++Q    + + VS+       ++         TW +   E  S  
Sbjct: 523 IKDPTRIIKQPE-YAVVQ----RGSTVSFE----CKVKHDHTLILTVTWLKDHSELPSDG 573

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAI 513
              V+K      +V+            +A     N   S ++S V P   P  +  +   
Sbjct: 574 RFTVDKDHLVVADVND---DDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNP 630

Query: 514 PLG-------SSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
           P           +  L W   +  N  +  + I+Y+ V   + G    +       TT  
Sbjct: 631 PFDLELTDQLDRSVQLSWTPGDDNNSPITKFIIEYEDVMH-EAGLWHHQTEVPGTQTTAQ 689

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVI 620
            KL+   P   Y   +      G      A  +YL     P KNP  VEG GS P+NLVI
Sbjct: 690 LKLS---PYVNYAFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVI 746

Query: 621 SWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           +W  +   E N P  +Y++ WR+ +  + W    V+    S+ +++  PTF PY +KV
Sbjct: 747 TWKPLSGFESNGPGLQYKVSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLVKV 802



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 98/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 825  LPMVAPGNVR-VSVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSSNRNRRHIEKK 883

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S   +F TPEGVP    SL+ + 
Sbjct: 884  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRAFHTPEGVPSAPSSLKIVN 943

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 944  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLIDLKIPA----NKTRWTLKNL 999

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1000 NFSTRYKFYFYAQTAAGSGSQ 1020



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 140/606 (23%), Positives = 227/606 (37%), Gaps = 63/606 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 361 LICRANGNPKPRISWLSNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSSVYQCNAS 416

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T          +     +C   G P P I W    K 
Sbjct: 417 NEYGYLLANAF-VNVLAEPPRILTSANTLYQVIADRPAFLDCAFFGSPLPSIEWFKGAK- 474

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 475 -GSALREDIYILHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQ 532

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P+      G TV   C+V         V W+ +  EL + GR+T+ +   L + DV   D
Sbjct: 533 PEYAVVQRGSTVSFECKVKHDHTLILTVTWLKDHSELPSDGRFTV-DKDHLVVADVNDDD 591

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G YTC A   L     S  L+V     +   P    +    +  F           + +
Sbjct: 592 GGTYTCVANTTLDNVSASAVLSV-----VAPTPTPAPIYDVPNPPFDLELTDQLDRSVQL 646

Query: 342 VWLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQA 394
            W  G +   PI     E E    ++  +           + Q          F + A  
Sbjct: 647 SWTPGDDNNSPITKFIIEYEDVMHEAGLWHHQTEVPGTQTTAQLKLSPYVNYAFRVMAVN 706

Query: 395 TLTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQ 441
           +L   +P EA   +           T ++ + ++    V++W P+S     G    YKV 
Sbjct: 707 SLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLSGFESNGPGLQYKV- 765

Query: 442 TWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 500
           +W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + 
Sbjct: 766 SWRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LVKVQALNDVGFAPEPAVVMGHSG 822

Query: 501 EGVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLER 555
           E +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+
Sbjct: 823 EDLPMVAPGNVRVSVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSSNRNRRHIEK 882

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGST 614
                  + T   L GLEP + Y +++      G+G A     F+ P       EG  S 
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRAFHTP-------EGVPSA 935

Query: 615 PNNLVI 620
           P++L I
Sbjct: 936 PSSLKI 941



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 129/296 (43%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   +TI  +   K++T  G Y
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKTGSGTLTINIMSDGKAETYEGVY 121

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +  V   + +P  T+   +  T+  G+++VL CR   G P P + W+
Sbjct: 122 QCTARNERGAAISNNIVIRSSRSPLWTKEKLEPMTLRSGQSLVLPCRPPMGLPPPIIFWM 181

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVKEHTH 309
            N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK  + 
Sbjct: 182 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDAREDYICYARFNHTQTIQQKQPISVKVTSA 241

Query: 310 I--TDQPEDY---EVEAGQSATFRCNAVSDPSLKLS-----IVWLR--GSEPIDFESEPR 357
               ++P  +   E  A +    R N +S   +        I W++  G+ PI+      
Sbjct: 242 KPHRERPPTFLTPEGNASRKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINR----T 297

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
           F ++   +L + + +E DSG Y C A+  L  I    ++TV+     + AP N  L
Sbjct: 298 FYRNFKKTLQIIQVTEADSGNYQCIAKNTLGAIHHTISVTVKAAPYWIIAPQNLVL 353



 Score = 41.2 bits (95), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 64/165 (38%), Gaps = 18/165 (10%)

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHN 255
           C   ++L        +  L   P IT+    +Y +D +  +V+ C   G P P  +W  N
Sbjct: 24  CQMLSALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRN 83

Query: 256 --QKELTGGRYTILETGDLKITDVAFADS------GEYTCFARNKLGTAQGSGSLTVKEH 307
               ++       ++TG   +T    +D       G Y C ARN+ G A  +  +     
Sbjct: 84  GTHFDIDKDPLVTMKTGSGTLTINIMSDGKAETYEGVYQCTARNERGAAISNNIVIRSSR 143

Query: 308 THI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLS---IVWLRGS 347
           + +   ++ E   + +GQS    C     P + L    I W+  S
Sbjct: 144 SPLWTKEKLEPMTLRSGQSLVLPCR----PPMGLPPPIIFWMDNS 184


>gi|350588952|ref|XP_003482753.1| PREDICTED: neuronal cell adhesion molecule isoform 5 [Sus scrofa]
          Length = 1180

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/373 (36%), Positives = 194/373 (52%), Gaps = 14/373 (3%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEF 96
           +RK+E  LR   + L CI  G P P   W K DG +PIN   R    N+ K+L I  V  
Sbjct: 259 SRKEE--LRGNVLSLECIAEGLPTPIIYWIKEDGTLPIN---RTFYRNFKKTLQIIQVTE 313

Query: 97  SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           +D G+Y C   N +G A  ++I ++V AAPY+ + P+ +  +  E  T  C+A+G P+P 
Sbjct: 314 ADSGNYQCIAKNTLG-AIHHTISVTVKAAPYWIIAPQNLVLSPGEDGTLICRANGNPKPR 372

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           I W+ NG PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA
Sbjct: 373 ISWLSNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSSVYQCNASNEYGYLLANAFVNVLA 432

Query: 217 HAPEITEAPKDEYTVDG-KTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLK 273
             P I  +    Y V   +   L C  FG+P P + W    K   L    Y + E G L+
Sbjct: 433 EPPRILTSANTLYQVIADRPAFLDCAFFGSPLPSIEWFKGAKGSALREDIYILHENGTLE 492

Query: 274 ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVS 333
           I       +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G + +F C    
Sbjct: 493 IPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQPEYAVVQRGSTVSFECKVKH 552

Query: 334 DPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393
           D +L L++ WL+     +  S+ RF    D+ L V   ++ D G YTC A T LD + A 
Sbjct: 553 DHTLILTVTWLKDHS--ELPSDGRFTVDKDH-LVVADVNDDDGGTYTCVANTTLDNVSAS 609

Query: 394 ATLTVQVPLEAPS 406
           A L+V  P   P+
Sbjct: 610 AVLSVVAPTPTPA 622



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 160/658 (24%), Positives = 269/658 (40%), Gaps = 65/658 (9%)

Query: 59  GTPLPQTIWSKDGVPINP-SDRISQGNYGKSLIIKHVEFSDQGSYTCEV----SNGVGEA 113
           G P P   W  +     P S+R+SQG  G       +    +  Y C      +  + + 
Sbjct: 172 GLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDAREDYICYARFNHTQTIQQK 231

Query: 114 KSYSIDLSVLAAPYFTVEPEFI----NAAEEE-----TVTFECKASGLPEPEIHWVHNGK 164
           +  S+ ++  A P+    P F+    NA+ +E      ++ EC A GLP P I+W+    
Sbjct: 232 QPISVKVTS-AKPHRERPPTFLTPEGNASRKEELRGNVLSLECIAEGLPTPIIYWIKEDG 290

Query: 165 --PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
             PI++      +K     + I  + ++D+GNY C A N+LG ++  + V V A AP   
Sbjct: 291 TLPINRTFYRNFKKT----LQIIQVTEADSGNYQCIAKNTLGAIHHTISVTVKA-APYWI 345

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAF 279
            AP++     G+   L CR  G PKP ++W+ N    E+     +    GD  I ++V  
Sbjct: 346 IAPQNLVLSPGEDGTLICRANGNPKPRISWLSNGVPIEIAPDDPSRKIDGDTIIFSNVQE 405

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSL 337
             S  Y C A N+ G    +  + V       +T     Y+V A + A   C     P  
Sbjct: 406 RSSSVYQCNASNEYGYLLANAFVNVLAEPPRILTSANTLYQVIADRPAFLDCAFFGSP-- 463

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
             SI W +G++      +   +  N  +L +  + +  +G YTC A+ +L   + +  L 
Sbjct: 464 LPSIEWFKGAKGSALREDIYILHENG-TLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLE 522

Query: 398 VQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE-GSIR 453
           ++ P   ++ P  + ++Q    + + VS+       ++         TW +   E  S  
Sbjct: 523 IKDPTRIIKQPE-YAVVQ----RGSTVSFE----CKVKHDHTLILTVTWLKDHSELPSDG 573

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAI 513
              V+K      +V+            +A     N   S ++S V P   P  +  +   
Sbjct: 574 RFTVDKDHLVVADVND---DDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNP 630

Query: 514 PLG-------SSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
           P           +  L W   +  N  +  + I+Y+ V   + G    +       TT  
Sbjct: 631 PFDLELTDQLDRSVQLSWTPGDDNNSPITKFIIEYEDVMH-EAGLWHHQTEVPGTQTTAQ 689

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVI 620
            KL+   P   Y   +      G      A  +YL     P KNP  VEG GS P+NLVI
Sbjct: 690 LKLS---PYVNYAFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVI 746

Query: 621 SWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           +W  +   E N P  +Y++ WR+ +  + W    V+    S+ +++  PTF PY +KV
Sbjct: 747 TWKPLSGFESNGPGLQYKVSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLVKV 802



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 98/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 825  LPMVAPGNVR-VSVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSSNRNRRHIEKK 883

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S   +F TPEGVP    SL+ + 
Sbjct: 884  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRAFHTPEGVPSAPSSLKIVN 943

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 944  PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLIDLKIPA----NKTRWTLKNL 999

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G++
Sbjct: 1000 NFSTRYKFYFYAQTAAGSGSQ 1020



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 140/606 (23%), Positives = 227/606 (37%), Gaps = 63/606 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 361 LICRANGNPKPRISWLSNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSSVYQCNAS 416

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T          +     +C   G P P I W    K 
Sbjct: 417 NEYGYLLANAF-VNVLAEPPRILTSANTLYQVIADRPAFLDCAFFGSPLPSIEWFKGAK- 474

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ +      I + 
Sbjct: 475 -GSALREDIYILHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQ 532

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P+      G TV   C+V         V W+ +  EL + GR+T+ +   L + DV   D
Sbjct: 533 PEYAVVQRGSTVSFECKVKHDHTLILTVTWLKDHSELPSDGRFTV-DKDHLVVADVNDDD 591

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G YTC A   L     S  L+V     +   P    +    +  F           + +
Sbjct: 592 GGTYTCVANTTLDNVSASAVLSV-----VAPTPTPAPIYDVPNPPFDLELTDQLDRSVQL 646

Query: 342 VWLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQA 394
            W  G +   PI     E E    ++  +           + Q          F + A  
Sbjct: 647 SWTPGDDNNSPITKFIIEYEDVMHEAGLWHHQTEVPGTQTTAQLKLSPYVNYAFRVMAVN 706

Query: 395 TLTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQ 441
           +L   +P EA   +           T ++ + ++    V++W P+S     G    YKV 
Sbjct: 707 SLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLSGFESNGPGLQYKV- 765

Query: 442 TWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 500
           +W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + 
Sbjct: 766 SWRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LVKVQALNDVGFAPEPAVVMGHSG 822

Query: 501 EGVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLER 555
           E +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +    +E+
Sbjct: 823 EDLPMVAPGNVRVSVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSSNRNRRHIEK 882

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGST 614
                  + T   L GLEP + Y +++      G+G A     F+ P       EG  S 
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRAFHTP-------EGVPSA 935

Query: 615 PNNLVI 620
           P++L I
Sbjct: 936 PSSLKI 941



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 129/296 (43%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   +TI  +   K++T  G Y
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKTGSGTLTINIMSDGKAETYEGVY 121

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +  V   + +P  T+   +  T+  G+++VL CR   G P P + W+
Sbjct: 122 QCTARNERGAAISNNIVIRSSRSPLWTKEKLEPMTLRSGQSLVLPCRPPMGLPPPIIFWM 181

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVKEHTH 309
            N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK  + 
Sbjct: 182 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDAREDYICYARFNHTQTIQQKQPISVKVTSA 241

Query: 310 I--TDQPEDY---EVEAGQSATFRCNAVSDPSLKLS-----IVWLR--GSEPIDFESEPR 357
               ++P  +   E  A +    R N +S   +        I W++  G+ PI+      
Sbjct: 242 KPHRERPPTFLTPEGNASRKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINRT---- 297

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
           F ++   +L + + +E DSG Y C A+  L  I    ++TV+     + AP N  L
Sbjct: 298 FYRNFKKTLQIIQVTEADSGNYQCIAKNTLGAIHHTISVTVKAAPYWIIAPQNLVL 353



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 64/165 (38%), Gaps = 18/165 (10%)

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHN 255
           C   ++L        +  L   P IT+    +Y +D +  +V+ C   G P P  +W  N
Sbjct: 24  CQMLSALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRN 83

Query: 256 --QKELTGGRYTILETGDLKITDVAFADS------GEYTCFARNKLGTAQGSGSLTVKEH 307
               ++       ++TG   +T    +D       G Y C ARN+ G A  +  +     
Sbjct: 84  GTHFDIDKDPLVTMKTGSGTLTINIMSDGKAETYEGVYQCTARNERGAAISNNIVIRSSR 143

Query: 308 THI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLS---IVWLRGS 347
           + +   ++ E   + +GQS    C     P + L    I W+  S
Sbjct: 144 SPLWTKEKLEPMTLRSGQSLVLPCR----PPMGLPPPIIFWMDNS 184


>gi|225637533|ref|NP_795904.3| neuronal cell adhesion molecule isoform 1 precursor [Mus musculus]
 gi|38372441|sp|Q810U4.2|NRCAM_MOUSE RecName: Full=Neuronal cell adhesion molecule; Short=Nr-CAM;
           AltName: Full=Neuronal surface protein Bravo;
           Short=mBravo; AltName: Full=NgCAM-related cell adhesion
           molecule; Short=Ng-CAM-related; Flags: Precursor
          Length = 1256

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 164/523 (31%), Positives = 241/523 (46%), Gaps = 36/523 (6%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W K DG  + P++R    N+ K+L I HV  +D G+Y C
Sbjct: 277 LRGNVLSLECIAEGLPTPIIYWIKEDG--MLPANRTFYRNFKKTLQITHVSEADSGNYQC 334

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I ++V AAPY+ V P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 335 IAKNALG-AVHHTISVTVKAAPYWIVAPQNLVLSPGENGTLICRANGNPKPRISWLTNGV 393

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  A  +P RK+  + I   N+++S +  Y CNA+N  GY+  + +VNVLA  P I  +
Sbjct: 394 PIEIALDDPSRKIDGDTIIFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILTS 453

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
               Y V   +  +L C  FG+P P + W    K   L    Y + + G L+I       
Sbjct: 454 ANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALHEDIYVLHDNGTLEIPVAQKDS 513

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L  +I
Sbjct: 514 TGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQPEYAVVQRGSKVSFECRVKHDHTLIPTI 573

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +WL+ +   +  ++ RF    D+ L V+   + D G YTC A T LD   A A L V  P
Sbjct: 574 MWLKDNG--ELPNDERFSTDKDH-LVVSDVKDDDGGTYTCTANTTLDSASASAVLRVVAP 630

Query: 402 LEAPS----------NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGS 451
              P+          +  L   +D K   ++W P    +       + ++        G 
Sbjct: 631 TPTPAPIYDVPNPPFDLELTNQLD-KSVQLTWTPGDDNN--SPITKFIIEYEDAMHDAGL 687

Query: 452 IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPGT 506
            R      G  TT ++ K  P      RV+A N      PSE     +     P+  P  
Sbjct: 688 WRHQAEVSGTQTTAQL-KLSPYVNYSFRVMAENSIGRSMPSEASEQYLTKAAEPDQNPMA 746

Query: 507 VQSLEAIPLGSSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
           V+ L   P       + W KP    Q NG  + YK+ ++   G
Sbjct: 747 VEGLGTEP---DNLVITW-KPLNGFQSNGPGLQYKVSWRQKDG 785



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 141/564 (25%), Positives = 230/564 (40%), Gaps = 58/564 (10%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W+   K     P N  R    N    + I ++ ++D+GNY C A
Sbjct: 282 LSLECIAEGLPTPIIYWI---KEDGMLPAN--RTFYRNFKKTLQITHVSEADSGNYQCIA 336

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK-- 257
            N+LG V+  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 337 KNALGAVHHTISVTVKA-APYWIVAPQNLVLSPGENGTLICRANGNPKPRISWLTNGVPI 395

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQP 314
           E+     +    GD  I ++V  + S  Y C A NK G    +  + V       +T   
Sbjct: 396 EIALDDPSRKIDGDTIIFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILTSAN 455

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      E  +V  ++ +L +  + + 
Sbjct: 456 TLYQVIANRPALLDCAFFGSP--MPTIEWFKGTKGSALH-EDIYVLHDNGTLEIPVAQKD 512

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
            +G YTC A+ +L   + +  L ++ P           +   + AVV          R  
Sbjct: 513 STGTYTCVARNKLGMAKNEVHLEIKDPTRI--------IKQPEYAVVQRGSKVSFECRVK 564

Query: 435 FRGYKVQT--WTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN---- 488
                + T  W + +GE       +   E  +T+ D  V +         +    N    
Sbjct: 565 HDHTLIPTIMWLKDNGE-------LPNDERFSTDKDHLVVSDVKDDDGGTYTCTANTTLD 617

Query: 489 -GPPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIK 540
               S ++  V P   P  +  +   P           +  L W   +  N  +  + I+
Sbjct: 618 SASASAVLRVVAPTPTPAPIYDVPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIE 677

Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKY 596
           Y+         L      +S  T T+A+L  L P   Y   +      G      A  +Y
Sbjct: 678 YED--AMHDAGLWRHQAEVSG-TQTTAQLK-LSPYVNYSFRVMAENSIGRSMPSEASEQY 733

Query: 597 LFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
           L     P +NP  VEG G+ P+NLVI+W  +   + N P  +Y++ WR+ +  + W    
Sbjct: 734 LTKAAEPDQNPMAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTS-- 791

Query: 655 VLDWRQSELVLANQPTFQPYEIKV 678
           V+    S+ +++  PTF PY IKV
Sbjct: 792 VVVANVSKYIVSGTPTFVPYLIKV 815



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV P+S+RGH +GY++  W  +      R  I  K
Sbjct: 838  LPMVAPGNVR-VSVVNSTLAEVHWDPVPPKSVRGHLQGYRIYYWKTQSSSKRNRRHIEKK 896

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 897  ILTFQGTKTHGMLPGLQPYSHYALNVRVVNGKGEGPASTDRGFHTPEGVPSAPSSLKIVN 956

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y ++YQ +  T ++GPL++ ++P       T   L  L
Sbjct: 957  PTLDSLTLEWDPPSHPNGILTEYILQYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 1012

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T  G G++
Sbjct: 1013 NFSTRYKFYFYAQTSVGPGSQ 1033



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 140/607 (23%), Positives = 222/607 (36%), Gaps = 65/607 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+ S    Y C  S
Sbjct: 374 LICRANGNPKPRISWLTNGVPIEIALDDPSRKID----GDTIIFSNVQESSSAVYQCNAS 429

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T                +C   G P P I W   G  
Sbjct: 430 NKYGYLLANAF-VNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPMPTIEWF-KGTK 487

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
            S    +         + I   +K  TG Y C A N LG    +V++ +      I + P
Sbjct: 488 GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQP 546

Query: 226 KDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRYTILETGDLKITDVAFADSG 283
           +      G  V   CRV       P + W+ +  EL        +   L ++DV   D G
Sbjct: 547 EYAVVQRGSKVSFECRVKHDHTLIPTIMWLKDNGELPNDERFSTDKDHLVVSDVKDDDGG 606

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVW 343
            YTC A   L +A  S  L V     +   P    +    +  F     +     + + W
Sbjct: 607 TYTCTANTTLDSASASAVLRV-----VAPTPTPAPIYDVPNPPFDLELTNQLDKSVQLTW 661

Query: 344 LRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQATL 396
             G +   PI     E E     +  +      S    + Q          F + A+ ++
Sbjct: 662 TPGDDNNSPITKFIIEYEDAMHDAGLWRHQAEVSGTQTTAQLKLSPYVNYSFRVMAENSI 721

Query: 397 TVQVPLEAPSNFTLIQV-------------IDAKKAVVSWNPVSPQSLRGHFRGYKVQTW 443
              +P EA   +                   +    V++W P++     G    YKV +W
Sbjct: 722 GRSMPSEASEQYLTKAAEPDQNPMAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKV-SW 780

Query: 444 TEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFV--- 498
            +KDG+     ++V N  +   +    FVP      +V A N     P P+ ++      
Sbjct: 781 RQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAAVMGHSGED 837

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLE 554
            P   PG V+      + S+   + W  V P+   G L GY+I Y   + +  +    +E
Sbjct: 838 LPMVAPGNVR---VSVVNSTLAEVHWDPVPPKSVRGHLQGYRIYYWKTQSSSKRNRRHIE 894

Query: 555 RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGS 613
           +       T T   L GL+P + Y +++      G+G A +   F+ P       EG  S
Sbjct: 895 KKILTFQGTKTHGMLPGLQPYSHYALNVRVVNGKGEGPASTDRGFHTP-------EGVPS 947

Query: 614 TPNNLVI 620
            P++L I
Sbjct: 948 APSSLKI 954



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 128/344 (37%), Gaps = 57/344 (16%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNGKPIS-QAP 170
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  ISALDVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKD 86

Query: 171 PNPRRKVGPNRITIENLR--KSDT--GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
           P    K G   + I  +   K++T  G Y C A N  G    +  V   + +P  T+   
Sbjct: 87  PLVTMKPGSGTLVINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKERL 146

Query: 227 DEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKITDVAFADS 282
           +   + +G+++VL CR   G P   + W+ N  Q+     R +    GDL  ++V   D+
Sbjct: 147 EPIVLQNGQSLVLPCRPPIGLPPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDT 206

Query: 283 GE-YTCFAR----------------------------NKLGTAQGSGSLTVKEHTHITDQ 313
            E Y C+AR                              L   +  G+ + KE       
Sbjct: 207 REDYICYARFNHTQTIQQKQPISLKVISVDELNDTIAANLSDTEFYGAKSSKERPPTFLT 266

Query: 314 PEDYEVEA----GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
           PE  E       G   +  C A   P+    I W++  E     +   F ++   +L +T
Sbjct: 267 PEGNESHKEELRGNVLSLECIAEGLPT--PIIYWIK--EDGMLPANRTFYRNFKKTLQIT 322

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             SE DSG Y C A+  L  +    ++TV+     + AP N  L
Sbjct: 323 HVSEADSGNYQCIAKNALGAVHHTISVTVKAAPYWIVAPQNLVL 366


>gi|410908411|ref|XP_003967684.1| PREDICTED: contactin-1a-like [Takifugu rubripes]
          Length = 1002

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 201/750 (26%), Positives = 308/750 (41%), Gaps = 115/750 (15%)

Query: 24  ISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQG 83
           +S   NR  P    V      AL  + + L C   G P+P+ +W K    + P+  +   
Sbjct: 217 LSERHNRKYPADLNVKFPDTTALVGQNITLECFALGNPVPEIMWKKLDGELPPNHEVRTA 276

Query: 84  NYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET- 142
             G  L + +V+F D G+Y CE  N  G+    ++ LSV A P +    E I   E++  
Sbjct: 277 --GAHLHLHNVQFEDSGTYQCEAVNSKGKDYHTAL-LSVEAFPEWV---EHITNTEKDLG 330

Query: 143 --VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
              T  C ASG PEP+I W+ NG+ +       R ++  N +T E     D+G Y C A 
Sbjct: 331 SRYTMSCVASGKPEPQIRWMKNGELLD------RDEMSFNSLTFE-----DSGMYQCVAE 379

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAP-KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL 259
           N  G +Y +  + V A AP     P K         VV+ CR   APKP   W  + + L
Sbjct: 380 NRHGVLYANAELRVFACAPTFEHNPLKRVLAPRNGRVVIECRPKAAPKPTFTWSKDTELL 439

Query: 260 TGG-RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYE 318
           +   R  I E G L+I +V  AD G YTCFA N  G A  +GSL V E T I   P + +
Sbjct: 440 SNSTRVFIWEDGSLEILNVTRADEGRYTCFAENDRGKANSTGSLLVLESTKINLAPTNAD 499

Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQ-----SNDYSLTVTKSSE 373
           ++AG++A  +C A+ DPSL ++ +W      ID +++ +  +     S++ +L +  +  
Sbjct: 500 IKAGENALMQCAALHDPSLDITFIWSLDDHVIDVQTDSQHYERGTNGSSNGALLIKNAQL 559

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPV 426
             +G+YTC AQT +D     A L V+ P  AP    ++   + KK  + W       +P+
Sbjct: 560 KHAGRYTCMAQTPIDNATESAQLVVRGPPGAPGGVRVMNKTE-KKVTLQWSRGADNHSPI 618

Query: 427 SPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
           S  S++ +   Y    W  K    S  E+   +G + T  V    P ++   RV A N  
Sbjct: 619 SKYSIQ-YRDAYSGDEW--KKAATSPPEV---EGNAETATVVDLFPWTEYEFRVFAANTL 672

Query: 487 YNGPPS---------EIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLM 535
             G PS         + +  V P  + G   +       S    + W  V+P+   G   
Sbjct: 673 GTGEPSSPTAKEKTLDAVPVVAPSNIGGGGGT-------SRELTITWTPVQPQHYYGSNF 725

Query: 536 GYKIKYQSVKGTKVGPLLERLPYISDPTTTS--AKLAGLEPSTKYRIHLAGYTKAGDGAE 593
           GY + ++     +      R   ++DP   S   K   L P TK+++ +  +   G+G  
Sbjct: 726 GYIVAFRPFDNKEW-----RKVMVADPLARSYIHKDLALPPLTKFQVKVKAFNSKGEGPF 780

Query: 594 S-KYLFY----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
           S   + Y     P + P   EG+  +     +SW  +P+   +    K   FWR H   E
Sbjct: 781 SLTAVIYSAQDAPSEAPSGFEGKALSATEAFVSWLPLPQDSIDGYQVK---FWRNHEESE 837

Query: 649 AWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDK 708
              Q                                          +      T T +D 
Sbjct: 838 GGAQ-----------------------------------------TVTASNTDTNTRLDG 856

Query: 709 FVPASKNFARVLAFNGAYNGPPSEIISFVT 738
             P S     V  +N A  GPPSE +   T
Sbjct: 857 MKPNSNYLIEVRGYNTAGYGPPSERLQIRT 886



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 151/663 (22%), Positives = 253/663 (38%), Gaps = 81/663 (12%)

Query: 72  VPINPSDRISQ--GNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYS--IDLSVLAAPY 127
           +P++    +SQ  GN    L I  V+ SD G+Y+C  S+       +S  I L  L+  +
Sbjct: 166 IPLDKRRFVSQITGN----LYISKVDSSDSGNYSCIASSSSISKSVFSNYIPLVPLSERH 221

Query: 128 FTVEPEFINAAEEET-------VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN 180
               P  +N    +T       +T EC A G P PEI W    K   + PPN   +    
Sbjct: 222 NRKYPADLNVKFPDTTALVGQNITLECFALGNPVPEIMW---KKLDGELPPNHEVRTAGA 278

Query: 181 RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC 240
            + + N++  D+G Y C A NS G  Y    ++V A  PE  E   +     G    ++C
Sbjct: 279 HLHLHNVQFEDSGTYQCEAVNSKGKDYHTALLSVEAF-PEWVEHITNTEKDLGSRYTMSC 337

Query: 241 RVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSG 300
              G P+P++ W+ N +        +L+  ++    + F DSG Y C A N+ G    + 
Sbjct: 338 VASGKPEPQIRWMKNGE--------LLDRDEMSFNSLTFEDSGMYQCVAENRHGVLYANA 389

Query: 301 SLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQ 360
            L V       +      V A ++           + K +  W + +E +   +  R   
Sbjct: 390 ELRVFACAPTFEHNPLKRVLAPRNGRVVIECRPKAAPKPTFTWSKDTELL--SNSTRVFI 447

Query: 361 SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAK 417
             D SL +   +  D G+YTC A+ +     +  +L V    +   AP+N     +   +
Sbjct: 448 WEDGSLEILNVTRADEGRYTCFAENDRGKANSTGSLLVLESTKINLAPTN---ADIKAGE 504

Query: 418 KAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 477
            A++    +   SL   F       W+  D         V   ++ +   ++    S N 
Sbjct: 505 NALMQCAALHDPSLDITF------IWSLDDH--------VIDVQTDSQHYERGTNGSSNG 550

Query: 478 ARV-----LAFNGAY---------NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLK 523
           A +     L   G Y         N   S  +    P G PG V+ +           L+
Sbjct: 551 ALLIKNAQLKHAGRYTCMAQTPIDNATESAQLVVRGPPGAPGGVRVMNKT---EKKVTLQ 607

Query: 524 WVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
           W +    +  +  Y I+Y+              P   +    +A +  L P T+Y   + 
Sbjct: 608 WSRGADNHSPISKYSIQYRDAYSGDEWKKAATSPPEVEGNAETATVVDLFPWTEYEFRVF 667

Query: 584 GYTKAGDG------AESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKY 637
                G G      A+ K L  VP   P N+ G G T   L I+WT +    +   +F Y
Sbjct: 668 AANTLGTGEPSSPTAKEKTLDAVPVVAPSNIGGGGGTSRELTITWTPVQPQHYYGSNFGY 727

Query: 638 RIFWRRHNTGEAWNQDDVLD-----WRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIR 692
            + +R  +  E W +  V D     +   +L L   P    +++KV    ++ +G  S+ 
Sbjct: 728 IVAFRPFDNKE-WRKVMVADPLARSYIHKDLAL---PPLTKFQVKVKAFNSKGEGPFSLT 783

Query: 693 ELI 695
            +I
Sbjct: 784 AVI 786



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 80/197 (40%), Gaps = 20/197 (10%)

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            P EAPS F   + + A +A VSW P+   S+ G    Y+V+ W   +      + +   
Sbjct: 792 APSEAPSGFEG-KALSATEAFVSWLPLPQDSIDG----YQVKFWRNHEESEGGAQTVTAS 846

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
              T T +D   P S     V  +N A  GPPSE +   T +  P     +    L    
Sbjct: 847 NTDTNTRLDGMKPNSNYLIEVRGYNTAGYGPPSERLQIRTKKAPPSQAPRIIGKRLKGQT 906

Query: 520 FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLL--ERLPYISDPTTTSAKLAGLEPS 575
             + W   +P      + GYK+ Y+  +G  +G L    RL YI  P         L   
Sbjct: 907 INIAWENAQPLPDEAAIDGYKVLYRK-QGQALGTLYTTSRL-YIDLP---------LPAE 955

Query: 576 TKYRIHLAGYTKAGDGA 592
             Y + +  +T+ GDGA
Sbjct: 956 GDYVVEVRAHTEGGDGA 972



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 112/285 (39%), Gaps = 44/285 (15%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITI 184
           P  T+ PE    + E  +T  C+A   P     W  + K I   A  +    +G N +  
Sbjct: 30  PVETIYPE---ESPEAKITMNCRARASPPATYKWRKDNKDIDFSAESSHFSLMGGNLVIS 86

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDV------YVNVLAHAPEITEAPKDEYTVDGKTVVL 238
           + +++   GNY C A N+ G V          Y+++ +     +E  +  +  +G+  VL
Sbjct: 87  DPVKEQHAGNYCCLAANTFGTVISREASVQFGYLDLFS-----SEERESVHVKEGQGAVL 141

Query: 239 TCRVFGAPKPE------VNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCF 288
            C    AP P         WI N+      L   R+    TG+L I+ V  +DSG Y+C 
Sbjct: 142 LC----APPPHYPAELSFRWILNEFPTFIPLDKRRFVSQITGNLYISKVDSSDSGNYSCI 197

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQPEDYEVE-------AGQSATFRCNAVSDPSLK 338
           A +   +     +   L      H    P D  V+        GQ+ T  C A+ +P  +
Sbjct: 198 ASSSSISKSVFSNYIPLVPLSERHNRKYPADLNVKFPDTTALVGQNITLECFALGNPVPE 257

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +    L G  P + E     V++    L +      DSG Y C A
Sbjct: 258 IMWKKLDGELPPNHE-----VRTAGAHLHLHNVQFEDSGTYQCEA 297


>gi|410918979|ref|XP_003972962.1| PREDICTED: neuronal cell adhesion molecule-like [Takifugu rubripes]
          Length = 1211

 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 203/752 (26%), Positives = 306/752 (40%), Gaps = 77/752 (10%)

Query: 16  LLNVIATGISASQNRHAPKQQYV--TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVP 73
           L N+        +  H P   Y   +   ++ LR + +EL CI  G P P   W KDG  
Sbjct: 246 LYNITDFSRDNPEGDHQPGFMYPMGSTSTKMVLRGETLELECIAEGLPTPDISWQKDGGE 305

Query: 74  INPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPE 133
           + PS R+S   + K+L I  V  +D G Y C  +N +G +  + I ++V AAP++   P 
Sbjct: 306 L-PSGRVSFQTFQKTLKISDVVEADAGDYRCTATNRLG-STHHIIKVTVKAAPFWISAPR 363

Query: 134 FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTG 193
            +  A  ET    C+  G P+P+I W  NG  I  AP + RRKV  + +T+ +++   + 
Sbjct: 364 NLILAPNETGVLMCRVGGEPKPKITWFVNGVSIENAPEDLRRKVDGDTVTLSSVQSGSSA 423

Query: 194 NYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNW 252
            Y CNA+N  GY+  + +VNVLA AP I   P   Y V      +L C  FG+P P + W
Sbjct: 424 VYQCNASNEFGYLMANAFVNVLAEAPRILTPPNRVYQVITNNPALLHCASFGSPIPVITW 483

Query: 253 IHN-QKELTGGR-YTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
             + Q  +  G  Y I E G L+I      +SG+YTC A N LG  +    L VKE T I
Sbjct: 484 FKDIQTSIKDGDPYVIHENGTLEIHVAQPLNSGKYTCIATNNLGIKENHVFLEVKEPTRI 543

Query: 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTK 370
             QPE   V+ G  A F C    DP+L  ++ WL+ S   +   + RFV   D +LT+  
Sbjct: 544 LKQPEYKVVQRGMRAAFECTVKHDPTLIPTMTWLKDSG--ELPDDERFVVDAD-TLTIMD 600

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTV-------QVPLEAPSNFTLIQVIDAKKAVVSW 423
            ++ D G YTC   T LD   A A LTV        +  E P   T +++ D  +  V  
Sbjct: 601 VTDRDKGTYTCVMNTTLDHDSASAVLTVVEATPTPAIVYERPDPPTDLEMTDQTERGVRL 660

Query: 424 NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAF 483
             +         + + +Q        G    L    G STT ++    P      RVLA 
Sbjct: 661 TWIPGDEHNSPTQKFLIQYEDLLHQPGVWTNLTEVDGTSTTVQL-SLSPHVYYSFRVLAM 719

Query: 484 NG-AYNGPPSEIISFVTPEGVPG-TVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKI 539
           N   Y+ P      + T    P      ++ I  G     + W  +   Q NG  + Y++
Sbjct: 720 NRLGYSKPSQPSNQYRTNPAAPDENPADVKGIGTGPGNLVISWTPLTGFQSNGPGLEYRV 779

Query: 540 KYQSVKG-----TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           +++ +       TK    + +      PT  S           Y I +      G G E 
Sbjct: 780 QWRQLNAGGDWSTKNVANVSQFVVSGTPTYVS-----------YEIRVQAINDYGSGPEP 828

Query: 595 KYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEA 649
           + +       +P   P  V+ +        + W  +P          Y++++RR      
Sbjct: 829 ETVIGYSGEDLPLSAPKGVQVKVPNSTFAEVHWEPVPRSSVRGKLQGYKVYYRRQRG--- 885

Query: 650 WNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKF 709
                            ++   +    + V T++    EG +  L               
Sbjct: 886 ----------------LHETEPEEEPQEQVLTFSGNRSEGRLPGL--------------- 914

Query: 710 VPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
            P S     +  FN    GPPS+   F TPEG
Sbjct: 915 QPYSVYNLSIRVFNNKGEGPPSQSSRFETPEG 946



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 100/230 (43%), Gaps = 21/230 (9%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK------DGEGSIR 453
            +PL AP     ++V ++  A V W PV   S+RG  +GYKV    ++        E    
Sbjct: 839  LPLSAPKGVQ-VKVPNSTFAEVHWEPVPRSSVRGKLQGYKVYYRRQRGLHETEPEEEPQE 897

Query: 454  ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAI 513
            +++   G  +   +    P S     +  FN    GPPS+   F TPEGVPG    L  I
Sbjct: 898  QVLTFSGNRSEGRLPGLQPYSVYNLSIRVFNNKGEGPPSQSSRFETPEGVPGP-PFLNTI 956

Query: 514  PLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLE 573
                 +  L+   P Q NG L+GY +KYQ V  T      +   ++++ TT +  L  L 
Sbjct: 957  NRSLDSLTLELGPPLQRNGRLLGYTLKYQPVNSTHELEPPKIRTFLANETTFT--LHNLN 1014

Query: 574  PSTKYRIHLAGYTKAGDGA-----------ESKYLFYVPFKNPDNVEGRG 612
             ST Y+ +L+  T  G G             SK L YV +  P  V G+ 
Sbjct: 1015 SSTLYKFYLSAKTIKGSGPFTTEEAFTVMETSKPLIYVIYIPPPVVTGKA 1064



 Score = 46.6 bits (109), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 116/314 (36%), Gaps = 48/314 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIE---NLRKSDTGNYG 196
           E +   C+A G P P   W  NG     +       K G   + I+      ++  G Y 
Sbjct: 58  ENIVIHCEAKGKPHPSFSWTRNGTHFDVEKDSKVLMKPGSGTLVIDISGEKAEAYEGTYQ 117

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCR-VFGAPKPEVNWIH 254
           C A N  G    +  V   + +P  ++   +   V  G ++VL CR   G P P + W+ 
Sbjct: 118 CTAHNDHGTALSNKIVIRQSRSPLWSKERNEAVVVQKGVSLVLQCRPPAGLPPPVIFWMD 177

Query: 255 N--QKELTGGRYTILETGDLKITDVAFADSG-EYTCFAR-NKLGTAQGSGSL-------- 302
           N   +     R +    GDL  ++V   DS  +Y C+AR     T Q    +        
Sbjct: 178 NNFHRLPLDKRVSQALNGDLYFSNVLPEDSRPDYICYARFPHTQTIQQKQPISLNVLDME 237

Query: 303 ----TVKEHTHIT----DQPE-DYE--------------VEAGQSATFRCNAVSDPSLKL 339
               TV    +IT    D PE D++              V  G++    C A   P+  +
Sbjct: 238 TVNETVAALYNITDFSRDNPEGDHQPGFMYPMGSTSTKMVLRGETLELECIAEGLPTPDI 297

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           S  W +     +  S     Q+   +L ++   E D+G Y C A   L        +TV+
Sbjct: 298 S--WQKDGG--ELPSGRVSFQTFQKTLKISDVVEADAGDYRCTATNRLGSTHHIIKVTVK 353

Query: 400 VP---LEAPSNFTL 410
                + AP N  L
Sbjct: 354 AAPFWISAPRNLIL 367


>gi|344270452|ref|XP_003407058.1| PREDICTED: LOW QUALITY PROTEIN: neuronal cell adhesion
           molecule-like [Loxodonta africana]
          Length = 1239

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 183/631 (29%), Positives = 276/631 (43%), Gaps = 74/631 (11%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           LR   + L CI  G P P   W K DG +PIN   R    N+ K+L I HV  +D G Y 
Sbjct: 283 LRGNVLSLECIAEGLPTPIIHWIKEDGTLPIN---RTFYKNFRKTLQIIHVSEADSGKYQ 339

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G    ++I ++V AAPY+ + P  +  +  E  +  C+ +G P+P+I W+ NG
Sbjct: 340 CIAKNALG-VIHHTISVTVKAAPYWIMAPRNLVLSPGEDGSLICRPNGNPKPKISWLTNG 398

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            PI  A  +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I  
Sbjct: 399 VPIEIASDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT 458

Query: 224 APKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFA 280
                Y V   +  +L C  FG+P P V W    K   L    Y + E G L+I      
Sbjct: 459 PANTLYQVIANRPALLDCAFFGSPLPTVEWFKGAKGSALREDIYVLHENGTLEIPVAQKD 518

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G + +F C    D +L  +
Sbjct: 519 STGTYTCVARNKLGVAKNEARLEIKDPTRIIKQPEYAVVQRGGTVSFECKVKHDHTLIPT 578

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I+WL+ +   +   + RF    D+ L V    + D G YTC A T LD + A A L+V  
Sbjct: 579 IMWLKDNR--ELPDDRRFTVDKDH-LEVADVGDDDGGTYTCVANTTLDNVSASAVLSVVA 635

Query: 401 PLEAPS-------------------------------NFTLIQVIDAKK----------- 418
           P   P+                               N + I   D K            
Sbjct: 636 PTPTPAPIYDVPNPPFDLELTNHLNKSVQLSWTPGDDNNSPITKPDKKSPRLWKGLGSEP 695

Query: 419 --AVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASK 475
              V++W P++     G    YKV +W +KDG+     ++V N  +   +    FVP   
Sbjct: 696 IILVITWKPLNGFESNGPGLQYKV-SWRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY-- 752

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNG 532
              +V A N     P   ++   + E +P     ++    + S+   + W  V  +   G
Sbjct: 753 -LIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRG 811

Query: 533 VLMGYKIKYQSVKGT--KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGD 590
            L GY+I Y   +    +    +E+       + T   L GLEP + Y +++      G+
Sbjct: 812 HLQGYRIYYWKAQSLSERSKRHIEKKILTFQGSKTHGMLPGLEPFSHYTVNVRVVNGKGE 871

Query: 591 G-AESKYLFYVPFKNPDNVEGRGSTPNNLVI 620
           G A    +F  P       EG  S P++L +
Sbjct: 872 GPASPDRVFNTP-------EGVPSAPSSLKV 895



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 156/604 (25%), Positives = 246/604 (40%), Gaps = 72/604 (11%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVG 111
           L C   G P P+  W  +GVPI   SD  S+   G ++I  +V+      Y C  SN  G
Sbjct: 380 LICRPNGNPKPKISWLTNGVPIEIASDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYG 439

Query: 112 EAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
              + +  ++VLA P   + P               +C   G P P + W    K    A
Sbjct: 440 YLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTVEWFKGAK--GSA 496

Query: 170 PPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
                  +  N  + I   +K  TG Y C A N LG    +  + +      I + P+  
Sbjct: 497 LREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGVAKNEARLEI-KDPTRIIKQPEYA 555

Query: 229 YTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYT 286
               G TV   C+V       P + W+ + +EL   R   ++   L++ DV   D G YT
Sbjct: 556 VVQRGGTVSFECKVKHDHTLIPTIMWLKDNRELPDDRRFTVDKDHLEVADVGDDDGGTYT 615

Query: 287 CFARNKLGTAQGSGSLTVKEHT-------HITDQPEDYEVEAGQSATFRCN--------- 330
           C A   L     S  L+V   T        + + P D E+    + + + +         
Sbjct: 616 CVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNPPFDLELTNHLNKSVQLSWTPGDDNNS 675

Query: 331 AVSDPSLKLSIVWL-RGSEPI----------DFESEPRFVQ----------SNDYSLTVT 369
            ++ P  K   +W   GSEPI           FES    +Q           ++++  V 
Sbjct: 676 PITKPDKKSPRLWKGLGSEPIILVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV 735

Query: 370 K--SSELDSGQYT-------CRAQTELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDA 416
              S  + SG  T        +A  ++ F    A +       +P+ AP N   + V+++
Sbjct: 736 ANVSKYIVSGTPTFVPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVR-VNVVNS 794

Query: 417 KKAVVSWNPVSPQSLRGHFRGYKVQTW-----TEKDGEGSIRELIVNKGESTTTEVDKFV 471
             A V W+PV  +S+RGH +GY++  W     +E+      ++++  +G  T   +    
Sbjct: 795 TLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSLSERSKRHIEKKILTFQGSKTHGMLPGLE 854

Query: 472 PASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPN 531
           P S     V   NG   GP S    F TPEGVP    SL+ +     +  L+W  P  PN
Sbjct: 855 PFSHYTVNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKVVNPTLDSLTLEWDPPSHPN 914

Query: 532 GVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           G+L  Y +KYQ +  T ++GPL++ ++P       T   L  L  ST+Y+ +    T AG
Sbjct: 915 GILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWILKNLNFSTRYKFYFYAQTSAG 970

Query: 590 DGAE 593
            G++
Sbjct: 971 SGSQ 974



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 125/315 (39%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAP---PNPRRKVGPNRITIENLRKSDTGNY 195
           E +  +C+A G P P   W  NG    I + P    NP        I  E   ++  G Y
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMNPGSGTLVINIMSEGKAETYEGVY 121

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVN-WI 253
            C A N  G    +  V   + +P  T+   +   + +G+ +VL CR      P +  W+
Sbjct: 122 QCTARNERGAAISNNIVIRPSRSPLWTKEKLEPMILRNGQPLVLPCRPPIGLPPPIIFWM 181

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVKE--- 306
            N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK    
Sbjct: 182 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISV 241

Query: 307 -------HTHITD-----------QPEDY---EVEAGQSATFRCNAVSDPSLKLS----- 340
                    +++D           +P  +   E  A      R N +S   +        
Sbjct: 242 DELNDTIAANLSDTEFYSAKPSRERPPTFLTPEGNASHKEELRGNVLSLECIAEGLPTPI 301

Query: 341 IVWLR--GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W++  G+ PI+      F ++   +L +   SE DSG+Y C A+  L  I    ++TV
Sbjct: 302 IHWIKEDGTLPINR----TFYKNFRKTLQIIHVSEADSGKYQCIAKNALGVIHHTISVTV 357

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 358 KAAPYWIMAPRNLVL 372



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
           K+P   +G GS P  LVI+W  +   E N P  +Y++ WR+ +  + W    V+    S+
Sbjct: 683 KSPRLWKGLGSEPIILVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS--VVVANVSK 740

Query: 663 LVLANQPTFQPYEIKV 678
            +++  PTF PY IKV
Sbjct: 741 YIVSGTPTFVPYLIKV 756


>gi|449490686|ref|XP_004174215.1| PREDICTED: LOW QUALITY PROTEIN: neurofascin-like, partial
           [Taeniopygia guttata]
          Length = 1044

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 137/404 (33%), Positives = 202/404 (50%), Gaps = 21/404 (5%)

Query: 37  YVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEF 96
           Y T   ++ LR   + L CI  G P P  +W K G  + P  +    N+ K+L I +V  
Sbjct: 268 YGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGGEL-PVGKTKLENFNKALRISNVSE 326

Query: 97  SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE 156
            D G Y C  SN +G  + ++I + V AAPY+  EPE +  A  +     C+A+G P+P 
Sbjct: 327 EDSGEYFCLASNKMGSIR-HTISVRVKAAPYWMNEPENLILAPGKDGRLVCRANGNPKPS 385

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           I W+ NG+PI  +PPNP R+V  + I   + +   +  Y CNA+N  GY+  + +V+VL 
Sbjct: 386 IQWLVNGEPIESSPPNPSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLD 445

Query: 217 HAPEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDL 272
             P I   P+++    +      L C  FG+P P + W  N +   L GG Y   E G L
Sbjct: 446 VPPRIL-GPRNQLIRVIQNNRTRLDCPFFGSPIPTLRWFKNGQGNTLDGGNYKAHENGSL 504

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV 332
           ++      D G YTC A N LG A+    L VK+ T I   PED  V+ G      C   
Sbjct: 505 EMFMARKEDQGIYTCVATNILGKAEAQVRLEVKDPTRIVRGPEDQVVKRGTMPRLHCRVK 564

Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
            DP+L+L + WL+   P+   S    ++  +  LT+   +E D G YTC A TELD   A
Sbjct: 565 HDPTLRLMVTWLKDDAPLYLGSR---MKKEEDGLTIYGVTEKDQGDYTCVASTELDKDLA 621

Query: 393 QATLTV---------QVPLEAPSNFTLIQVID-AKKAV-VSWNP 425
           +A LTV          +P E P     +++ D A+++V ++W P
Sbjct: 622 KAYLTVLAIPANRLRDLPKERPDRPRDLELTDLAERSVRLTWIP 665



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 137/568 (24%), Positives = 228/568 (40%), Gaps = 65/568 (11%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATN 201
           +  EC ASG+P P+I W   G    + P    +    N+ + I N+ + D+G Y C A+N
Sbjct: 282 LLLECIASGVPAPDIMWYKKG---GELPVGKTKLENFNKALRISNVSEEDSGEYFCLASN 338

Query: 202 SLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK--EL 259
            +G +   + V V A AP     P++     GK   L CR  G PKP + W+ N +  E 
Sbjct: 339 KMGSIRHTISVRVKA-APYWMNEPENLILAPGKDGRLVCRANGNPKPSIQWLVNGEPIES 397

Query: 260 TGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYE 318
           +    +    GD +   D     S  Y C A N+ G    +  ++V +       P +  
Sbjct: 398 SPPNPSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRILGPRNQL 457

Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQ 378
           +   Q+   R +     S   ++ W +  +    +        N  SL +  + + D G 
Sbjct: 458 IRVIQNNRTRLDCPFFGSPIPTLRWFKNGQGNTLDGGNYKAHENG-SLEMFMARKEDQGI 516

Query: 379 YTCRAQTELDFIEAQATLTVQVPLE--------------APSNFTLIQVIDAKKAVVSW- 423
           YTC A   L   EAQ  L V+ P                 P     ++     + +V+W 
Sbjct: 517 YTCVATNILGKAEAQVRLEVKDPTRIVRGPEDQVVKRGTMPRLHCRVKHDPTLRLMVTWL 576

Query: 424 NPVSPQSLRGHFR----GYKVQTWTEKDGEGSIRELIVNKGEST---TTEVDKFVPASKN 476
              +P  L    +    G  +   TEKD           +G+ T   +TE+DK +  +K 
Sbjct: 577 KDDAPLYLGSRMKKEEDGLTIYGVTEKD-----------QGDYTCVASTELDKDL--AKA 623

Query: 477 FARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMG 536
           +  VLA       P + +     P+  P   + LE   L   +  L W+  +  N  +  
Sbjct: 624 YLTVLAI------PANRLRDL--PKERPDRPRDLELTDLAERSVRLTWIPGDDNNSPITD 675

Query: 537 YKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-- 594
           Y ++++  +  + G       Y   P + ++ +  L P   Y+  +      G    S  
Sbjct: 676 YIVQFEEDR-FQPGMWHNHSRY---PGSVNSAVLSLSPYVNYQFRVIAVNDVGSSVPSLP 731

Query: 595 --KYLF--YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
             +Y      P  NP  V+G G+  NN+ I+WT +   +   P+ +Y + WRR +   +W
Sbjct: 732 SERYQTNGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSW 791

Query: 651 NQDDVLDWRQSELVLANQPTFQPYEIKV 678
             + V   R +  V+ N P + PYEIKV
Sbjct: 792 YNETV---RGARHVVWNTPIYVPYEIKV 816



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 142/638 (22%), Positives = 240/638 (37%), Gaps = 102/638 (15%)

Query: 15   ILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI 74
            +L N   + +        P+ Q +       ++N +  L C F G+P+P   W K+G   
Sbjct: 435  LLANAFVSVLDVPPRILGPRNQLIR-----VIQNNRTRLDCPFFGSPIPTLRWFKNGQ-- 487

Query: 75   NPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV 130
               + +  GNY      SL +      DQG YTC  +N +G+A++  + L V        
Sbjct: 488  --GNTLDGGNYKAHENGSLEMFMARKEDQGIYTCVATNILGKAEA-QVRLEVKDPTRIVR 544

Query: 131  EPEFINAAEEETVTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLR 188
             PE             C+    P   +   W+ +  P+       R K   + +TI  + 
Sbjct: 545  GPEDQVVKRGTMPRLHCRVKHDPTLRLMVTWLKDDAPLYLGS---RMKKEEDGLTIYGVT 601

Query: 189  KSDTGNYGCNATNSLGYVYKDVYVNV-------LAHAP-EITEAPKDEYTVD--GKTVVL 238
            + D G+Y C A+  L       Y+ V       L   P E  + P+D    D   ++V L
Sbjct: 602  EKDQGDYTCVASTELDKDLAKAYLTVLAIPANRLRDLPKERPDRPRDLELTDLAERSVRL 661

Query: 239  T--------------CRVFGAPKPEVNWIHNQKELTGG--------------RYTILETG 270
            T                 F   + +    HN     G               ++ ++   
Sbjct: 662  TWIPGDDNNSPITDYIVQFEEDRFQPGMWHNHSRYPGSVNSAVLSLSPYVNYQFRVIAVN 721

Query: 271  DLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN 330
            D+  +  +       T  AR ++      G+ T K +  IT  P +     G        
Sbjct: 722  DVGSSVPSLPSERYQTNGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYG-------- 773

Query: 331  AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQ-----YTCRAQT 385
                P+L+  + W R         +PR    + Y+ TV  +  +         Y  + Q 
Sbjct: 774  ----PNLRYIVRWRR--------RDPR---GSWYNETVRGARHVVWNTPIYVPYEIKVQA 818

Query: 386  ELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYK 439
            E DF  A    T         P  AP++   I+V+++    ++W  V   +++G  + Y+
Sbjct: 819  ENDFGRAPEPDTYIGYSGEDYPKAAPTDVR-IRVLNSTAIALTWTRVHLDTIQGQLKEYR 877

Query: 440  VQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
               W +     ++     R+ +   G+     V +  P S     ++  NG  +GP SE+
Sbjct: 878  AYFWRDSSLLKNLWVSKKRQFVSFPGDRNRGTVSRLFPYSNYKLEMVVTNGRGDGPRSEM 937

Query: 495  ISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVG-PLL 553
              F TPEGVP + + L           L+W  PE PNG++ GY ++YQ   G++ G   +
Sbjct: 938  KEFPTPEGVPSSPRYLRIRQPNLEIINLEWDHPEHPNGIITGYTLRYQPFNGSRTGRTXV 997

Query: 554  ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            E L     P  T   L   +P ++YR  L   T+ G+G
Sbjct: 998  ENL----SPKQTRFTLQRSDPISRYRFVLRARTQVGEG 1031



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 76/323 (23%), Positives = 120/323 (37%), Gaps = 51/323 (15%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSDT--GN 194
            + +  EC+A G P P   W  NGK   +++ P  + RR+ G   I   +  + D   G 
Sbjct: 57  RDNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHSGGRPDDYEGE 116

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCR-VFGAPKPEVNW 252
           Y C A N  G          ++ +P   +   D   VD G  + L C    G P+P + W
Sbjct: 117 YQCFARNDYGTALSSKIHLQVSKSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPEPVIFW 176

Query: 253 IHNQKELT--GGRYTILETGDLKITDVAFADS-GEYTCFARNKL-GTAQGSGSLTVK--- 305
           + +  E      R +    GDL  ++V   D+  +Y+C AR     T Q     T+K   
Sbjct: 177 MSSSMEPIPQDKRVSQGHNGDLYFSNVLAQDALTDYSCNARFHFTHTIQQKNPYTLKVKT 236

Query: 306 ----EHTHITDQPEDYE----------------------VEAGQSATFRCNAVSDPSLKL 339
                 T + + P  Y                       V  G      C A   P+   
Sbjct: 237 KKSHNETSLGNSPAMYRARGITETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPA--P 294

Query: 340 SIVWLR--GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
            I+W +  G  P+       F    + +L ++  SE DSG+Y C A  ++  I    ++ 
Sbjct: 295 DIMWYKKGGELPVGKTKLENF----NKALRISNVSEEDSGEYFCLASNKMGSIRHTISVR 350

Query: 398 VQVP---LEAPSNFTLIQVIDAK 417
           V+     +  P N  L    D +
Sbjct: 351 VKAAPYWMNEPENLILAPGKDGR 373



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 76/189 (40%), Gaps = 28/189 (14%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLK 273
           L   P IT+    +Y VD +  + + C   G P P  +W  N K     +   +      
Sbjct: 38  LPQPPTITKQSIKDYIVDPRDNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRS 97

Query: 274 ITDVAFADS--------GEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------EDYE 318
            T V    S        GEY CFARN  GTA     L+ K H  ++  P       +  E
Sbjct: 98  GTLVIDFHSGGRPDDYEGEYQCFARNDYGTA-----LSSKIHLQVSKSPLWPKEKVDVIE 152

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDS 376
           V+ G   + +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D+
Sbjct: 153 VDEGAPLSLQCNP--PPGLPEPVIFWMSSSMEPI--PQDKRVSQGHNGDLYFSNVLAQDA 208

Query: 377 -GQYTCRAQ 384
              Y+C A+
Sbjct: 209 LTDYSCNAR 217


>gi|119220552|ref|NP_689957.3| protein sidekick-1 isoform 1 [Homo sapiens]
 gi|296452965|sp|Q7Z5N4.3|SDK1_HUMAN RecName: Full=Protein sidekick-1; Flags: Precursor
          Length = 2213

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 189/625 (30%), Positives = 276/625 (44%), Gaps = 44/625 (7%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
           + V   + +  L CI    P+      W ++GV      RI+ G  ++G+ L I +   +
Sbjct: 302 RSVVAGSSETTLECIASARPVEDLSVTWKRNGV------RITSGLHSFGRRLTISNPTSA 355

Query: 98  DQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPE 154
           D G Y CE +      E    +  L ++  PYFT EPE  I+A  EETV   C+A G+P 
Sbjct: 356 DTGPYVCEAALPGSAFEPARATAFLFIIEPPYFTAEPESRISAEVEETVDIGCQAMGVPL 415

Query: 155 PEIHWVHNGKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P + W  +   IS+   NPR KV     + I+ LR  D+G + C A+N  G +    Y++
Sbjct: 416 PTLQWYKDAISISRLQ-NPRYKVLASGGLRIQKLRPEDSGIFQCFASNEGGEIQTHTYLD 474

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V   AP  T+ P D    DG T +L C V GAPKP + W      L  G     R+ +LE
Sbjct: 475 VTNIAPVFTQRPVDTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLE 534

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L+I  V   D+G YTC+A N  G+   S +LTV   T I   PED+ V  G +AT  
Sbjct: 535 SGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNRTSIVHPPEDHVVIKGTTATLH 594

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A  DP + L  VW + +  +   S  R V   D SL ++++   D G Y+C   +E  
Sbjct: 595 CGATHDPRVSLRYVWKKDNVALTPSSTSRIVVEKDGSLLISQTWSGDIGDYSCEIVSEGG 654

Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV-SWNPVSPQSLRGHFRGYKVQTWTEKD 447
                A L V     +P N  +        AVV SW  V P         Y V+  +E +
Sbjct: 655 NDSRMARLEVIELPHSPQNLLVSPNSSHSHAVVLSW--VRPFDGNSPILYYIVEL-SENN 711

Query: 448 GEGSIRELIVNKG-ESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEG 502
               +   + N G E T   V    PA     RV A N    G Y+   S ++    P  
Sbjct: 712 SPWKVH--LSNVGPEMTGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPS 769

Query: 503 VPGTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560
            P   +++ A    + +  ++W  P +   NGVL GY ++Y+ + G   G   +R   I+
Sbjct: 770 APP--KNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYR-LAGLP-GEYQQR--NIT 823

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEGRGSTP 615
            P      +  L   T+Y I +A Y  AG G  S+      L  VP   P NV+      
Sbjct: 824 SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNS 883

Query: 616 NNLVISWTAMPEIEHNAPHFKYRIF 640
             +   W   P+   N  +  Y++ 
Sbjct: 884 TTIQFLWNPPPQQFINGINQGYKLL 908



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 176/679 (25%), Positives = 265/679 (39%), Gaps = 113/679 (16%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN-GVGEAK-SYSI 118
           P PQ  W ++G  I PS+RI+       L+I     SD G+Y  +  N   GE K S  I
Sbjct: 219 PRPQVTWFREGHKIIPSNRIAI-TLENQLVILATTTSDAGAYYVQAVNEKNGENKTSPFI 277

Query: 119 DLSV--------LAAPYFTVEP--EFINAAEEETVTFECKASGLP--EPEIHWVHNGKPI 166
            LS+          AP   V P    + A   ET T EC AS  P  +  + W  NG  I
Sbjct: 278 HLSIARDVGTPETMAPTIVVPPGNRSVVAGSSET-TLECIASARPVEDLSVTWKRNGVRI 336

Query: 167 SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV---LAHAPEITE 223
           +    +  R     R+TI N   +DTG Y C A    G  ++         +   P  T 
Sbjct: 337 TSGLHSFGR-----RLTISNPTSADTGPYVCEAALP-GSAFEPARATAFLFIIEPPYFTA 390

Query: 224 APKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITDVAF 279
            P+   + +  +TV + C+  G P P + W  +      L   RY +L +G L+I  +  
Sbjct: 391 EPESRISAEVEETVDIGCQAMGVPLPTLQWYKDAISISRLQNPRYKVLASGGLRIQKLRP 450

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHI-TDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            DSG + CFA N+ G  Q    L V     + T +P D  V  G +A  RC     P  K
Sbjct: 451 EDSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRPVDTTVTDGMTAILRCEVSGAP--K 508

Query: 339 LSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            +I W R +  +   S   PRF+      L +      D+G YTC A      + A ATL
Sbjct: 509 PAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATL 568

Query: 397 TV---QVPLEAPSNFTLIQVIDA------------------KKAVVSWNPVSPQSLRGHF 435
           TV      +  P +  +I+   A                  KK  V+  P S   +    
Sbjct: 569 TVWNRTSIVHPPEDHVVIKGTTATLHCGATHDPRVSLRYVWKKDNVALTPSSTSRIVVEK 628

Query: 436 RGYKV--QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
            G  +  QTW+   G+ S    IV++G + +             AR+            E
Sbjct: 629 DGSLLISQTWSGDIGDYSCE--IVSEGGNDS-----------RMARL------------E 663

Query: 494 IISFVTPEGVPGTVQSLEAIPLG--SSAFYLKWVKPEQPNGVLMGYKIKYQ------SVK 545
           +I        P + Q+L   P    S A  L WV+P   N  ++ Y ++         V 
Sbjct: 664 VIEL------PHSPQNLLVSPNSSHSHAVVLSWVRPFDGNSPILYYIVELSENNSPWKVH 717

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG---AESKYLFY--- 599
            + VGP +           T   ++GL P+  Y+  +    + G G   AE+  L     
Sbjct: 718 LSNVGPEM-----------TGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEE 766

Query: 600 VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
            P   P N+   G T  ++++ W   PE EHN     Y + +R       + Q ++    
Sbjct: 767 PPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNITSPE 826

Query: 660 QSELVLANQPTFQPYEIKV 678
            +  ++ +   +  YEI+V
Sbjct: 827 VNYCLVTDLIIWTQYEIQV 845



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 101/240 (42%), Gaps = 23/240 (9%)

Query: 389  FIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
            F  A    T+Q VP   P N    + +++      WNP   Q + G  +GYK+  W    
Sbjct: 856  FSRAVTEYTLQGVPTAPPQNVQ-TEAVNSTTIQFLWNPPPQQFINGINQGYKLLAWPADA 914

Query: 448  GEGSIRELI------VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
             E      I      V+ G    T + KF   +  F  VL F    +GPPS      T E
Sbjct: 915  PEAVTVVTIAPDFHGVHHGH--ITNLKKF---TAYFTSVLCFTTPGDGPPSTPQLVWTQE 969

Query: 502  GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
              PG V  L    +  ++  + W +P + NG++ GY+I ++ V G        RL +  +
Sbjct: 970  DKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQISWE-VYGRND----SRLTHTLN 1024

Query: 562  PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVIS 621
             TT   K+ GL   T Y I +A  T  G G  +     +    P ++ G    P+NLVIS
Sbjct: 1025 STTHEYKIQGLSSLTTYTIDVAAVTAVGTGLVTSST--ISSGVPPDLPG---APSNLVIS 1079



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 2/142 (1%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP N   +  + A +  V+W+P  P+S  G+ +GYK+  W E D +    ++ V   
Sbjct: 1701 PAMAPQNVQ-VTPLTASQLEVTWDPPPPESQNGNIQGYKIYYW-EADSQNETEKMKVLFL 1758

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
                  +      +K    + AFN A +GP S+     T +  PG    L    + S+  
Sbjct: 1759 PEPVVRLKNLTSHTKYLVSISAFNAAGDGPKSDPQQGRTHQAAPGAPSFLAFSEITSTTL 1818

Query: 521  YLKWVKPEQPNGVLMGYKIKYQ 542
             + W +P   NG+L GY++ Y+
Sbjct: 1819 NVSWGEPAAANGILQGYRVVYE 1840



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 100/275 (36%), Gaps = 29/275 (10%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           APYF  EP       E   +   C A G    E  W+ +   ++             +  
Sbjct: 103 APYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMRDDSELTTYSSE-------YKYI 155

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR-V 242
           I +L+K D G Y C   N +G + +      +A+     +  + +    G+  +L    +
Sbjct: 156 IPSLQKLDAGFYRCVVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVSQGRAAILNLLPI 215

Query: 243 FGAPKPEVNWIH-NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNK--------- 292
              P+P+V W     K +   R  I     L I     +D+G Y   A N+         
Sbjct: 216 TSYPRPQVTWFREGHKIIPSNRIAITLENQLVILATTTSDAGAYYVQAVNEKNGENKTSP 275

Query: 293 ---LGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSE 348
              L  A+  G+      T I   P +  V AG S  T  C A + P   LS+ W R   
Sbjct: 276 FIHLSIARDVGTPETMAPT-IVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGV 334

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            I        + S    LT++  +  D+G Y C A
Sbjct: 335 RIT-----SGLHSFGRRLTISNPTSADTGPYVCEA 364



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 10/207 (4%)

Query: 397  TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIRE 454
            T+Q P +       ++        + W P+      G+    GY+++ W       ++ +
Sbjct: 1168 TLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRSDLQSSAVAQ 1227

Query: 455  LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEAI 513
            ++ ++ E   T +++     +   ++ AFN    GP SE++   T E VP    +++ A 
Sbjct: 1228 VVSDRLEREFT-IEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRESVPSAAPENVSAE 1286

Query: 514  PLGSSAFYLKWVK-PEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAG 571
             + S+   L W   PEQ  NG+++GYKI +++ K     P   R   +    T SA LAG
Sbjct: 1287 AVSSTQILLTWTSVPEQDQNGLILGYKILFRA-KDLDPEP---RSHIVRGNHTQSALLAG 1342

Query: 572  LEPSTKYRIHLAGYTKAGDGAESKYLF 598
            L     Y + +  +T+ G+G  S  L 
Sbjct: 1343 LRKFVLYELQVLAFTRIGNGVPSTPLI 1369



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 3/144 (2%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V  Q   G   GYK+  +  KD +   R  IV  
Sbjct: 1275 VPSAAPENVS-AEAVSSTQILLTWTSVPEQDQNGLILGYKI-LFRAKDLDPEPRSHIVRG 1332

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-IISFVTPEGVPGTVQSLEAIPLGSS 518
              + +  +           +VLAF    NG PS  +I   T +  PG    L    +  +
Sbjct: 1333 NHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLT 1392

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQ 542
            +  + W  PE+PNG+++GY+I Y+
Sbjct: 1393 SVRIVWQPPEEPNGIILGYQIAYR 1416



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 30/229 (13%)

Query: 391  EAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV--QTWTEKD 447
            E +A  T+Q VP E P + +      +   ++ W P   +SL G  +GY++  +    + 
Sbjct: 1567 ETEAVTTLQDVPGEPPGSVSATPHTTSS-VLIQWQPPRDESLNGLLQGYRIYYRELEYEA 1625

Query: 448  GEGS----IRELIVNKGESTTTEVDKFVPAS-----------KNFARVLAFNGAYN---- 488
            G G+    ++  I    E T     K V +S           K + R      AYN    
Sbjct: 1626 GSGTEAKTLKNPIALHAELTAQSSFKTVNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGE 1685

Query: 489  GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
             P S  +     E  P    Q+++  PL +S   + W    PE  NG + GYKI Y    
Sbjct: 1686 SPASAPVEVFVGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEAD 1745

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
                   ++ L ++ +P     +L  L   TKY + ++ +  AGDG +S
Sbjct: 1746 SQNETEKMKVL-FLPEPV---VRLKNLTSHTKYLVSISAFNAAGDGPKS 1790



 Score = 42.7 bits (99), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 103/257 (40%), Gaps = 27/257 (10%)

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFVTPEGVPGTVQ-SLEAIPLGSS 518
            E+T   VD+  P +    R+ A N   +    SE  +  T + VPG    S+ A P  +S
Sbjct: 1534 EATACVVDRLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTS 1593

Query: 519  AFYLKWVKP--EQPNGVLMGYKIKYQSVK-----GTKVGPLLERLPYI------------ 559
            +  ++W  P  E  NG+L GY+I Y+ ++     GT+   L   +               
Sbjct: 1594 SVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKNPIALHAELTAQSSFKTV 1653

Query: 560  -SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYV----PFKNPDNVEGRGS 613
             S  T+T  +L  L+   +Y + +  Y   G+  A +    +V    P   P NV+    
Sbjct: 1654 NSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTPL 1713

Query: 614  TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
            T + L ++W   P    N     Y+I++   ++     +  VL   +  + L N  +   
Sbjct: 1714 TASQLEVTWDPPPPESQNGNIQGYKIYYWEADSQNETEKMKVLFLPEPVVRLKNLTSHTK 1773

Query: 674  YEIKVVQTWTEKDGEGS 690
            Y + +       DG  S
Sbjct: 1774 YLVSISAFNAAGDGPKS 1790



 Score = 40.4 bits (93), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 63/166 (37%), Gaps = 8/166 (4%)

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
           TE    +  ++G  +VLTC   G+   E  W+ +  ELT    T        I  +   D
Sbjct: 108 TEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMRDDSELT----TYSSEYKYIIPSLQKLD 163

Query: 282 SGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           +G Y C  RN++G   Q    + V       D  +   V  G++A      ++    +  
Sbjct: 164 AGFYRCVVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVSQGRAAILNLLPITS-YPRPQ 222

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + W R    I   +       N   +  T +S  D+G Y  +A  E
Sbjct: 223 VTWFREGHKIIPSNRIAITLENQLVILATTTS--DAGAYYVQAVNE 266


>gi|431839377|gb|ELK01303.1| Neuronal cell adhesion molecule [Pteropus alecto]
          Length = 1210

 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 167/518 (32%), Positives = 245/518 (47%), Gaps = 43/518 (8%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           LR   + L CI  G P P   W K DG +PIN   R    N+ K+L I  V  +D G+Y 
Sbjct: 277 LRGNVLSLECIAEGLPTPIIYWIKEDGTLPIN---RTFYRNFQKTLQIIQVSEADSGNYQ 333

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A  ++I ++V AAPY+ + P+ +  +  E     C+A+G+P+P I W+ NG
Sbjct: 334 CIAKNALG-AIYHTISVTVKAAPYWIMAPQNLVLSPGEDGALICRANGIPKPRISWLLNG 392

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I  
Sbjct: 393 VPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT 452

Query: 224 APKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFA 280
           +    Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I      
Sbjct: 453 SANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALREDIYVLHENGTLEIPVAQKD 512

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G + +F C    D +L  +
Sbjct: 513 STGSYTCVARNKLGMAKNEVRLEIKDPTRIIKQPEYAIVQRGSTVSFECRVKHDHTLIPT 572

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           + WL+ +   +  ++ RF    D+ L +   S+ D G YTC A T LD + A A L+V  
Sbjct: 573 VTWLKDNG--ELPNDGRFTVDKDH-LVIADVSDDDGGTYTCVANTTLDNVSASAVLSVVD 629

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
               P +  L   +D K   +SW P     SP +   H  G     W  +       E+ 
Sbjct: 630 VPNPPFDLELTDQLD-KSVQLSWTPGDDNNSPITNAMHEAGL----WHHQ------TEV- 677

Query: 457 VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-----ISFVTPEGVPGTVQSLE 511
              G  TT ++ K  P      RV+A N      PSE+          P+  P TV+ L 
Sbjct: 678 --PGTQTTAQL-KLSPYVNYSFRVMAENSLGRSLPSEVSEQYLTKAAEPDKNPTTVEGLG 734

Query: 512 AIPLGSSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
           + P       + W KP    + NG  + YK+ ++   G
Sbjct: 735 SEP---DNLVITW-KPLNGFESNGPGLQYKVSWRQKDG 768



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 144/557 (25%), Positives = 234/557 (42%), Gaps = 61/557 (10%)

Query: 143 VTFECKASGLPEPEIHWVHNGK--PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
           ++ EC A GLP P I+W+      PI++      +K     + I  + ++D+GNY C A 
Sbjct: 282 LSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFQKT----LQIIQVSEADSGNYQCIAK 337

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK--E 258
           N+LG +Y  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    E
Sbjct: 338 NALGAIYHTISVTVKA-APYWIMAPQNLVLSPGEDGALICRANGIPKPRISWLLNGVPIE 396

Query: 259 LTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPE 315
           +     +    GD  I ++V    S  Y C A N+ G    +  + V       +T    
Sbjct: 397 IAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTSANT 456

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
            Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + +  
Sbjct: 457 LYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALR-EDIYVLHENGTLEIPVAQKDS 513

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q    + + VS+       ++
Sbjct: 514 TGSYTCVARNKLGMAKNEVRLEIKDPTRIIKQPE-YAIVQ----RGSTVSFE----CRVK 564

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN-----FARVLAFNGAY 487
                    TW + +GE      + N G  T  + D  V A  +         +A     
Sbjct: 565 HDHTLIPTVTWLKDNGE------LPNDGRFTVDK-DHLVIADVSDDDGGTYTCVANTTLD 617

Query: 488 NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM------GYKIKY 541
           N   S ++S V    VP     LE       +  L W   +  N  +       G     
Sbjct: 618 NVSASAVLSVV---DVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITNAMHEAGLWHHQ 674

Query: 542 QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVP 601
             V GT+    L+  PY++      A+   L  S    +     TKA +          P
Sbjct: 675 TEVPGTQTTAQLKLSPYVNYSFRVMAE-NSLGRSLPSEVSEQYLTKAAE----------P 723

Query: 602 FKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQS 661
            KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W    V+    S
Sbjct: 724 DKNPTTVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS--VVVANVS 781

Query: 662 ELVLANQPTFQPYEIKV 678
           + +++  PTF PY IKV
Sbjct: 782 KYIVSGTPTFVPYLIKV 798



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 16/196 (8%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+P+           +K Q  ++++     ++++  +
Sbjct: 821  LPMVAPGNVH-VNVVNSTLAEVRWDPI---------YYWKAQNSSKRNRRHIEKKILTFQ 870

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
            G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ +     +
Sbjct: 871  GSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVNPTLDS 930

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGLEPSTK 577
              L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L  ST+
Sbjct: 931  LTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWTLKNLNFSTR 986

Query: 578  YRIHLAGYTKAGDGAE 593
            Y+ +L   T AG G++
Sbjct: 987  YKFYLYAQTSAGSGSQ 1002



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 139/349 (39%), Gaps = 67/349 (19%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNGKP------ 165
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  ISALEVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKD 86

Query: 166 --ISQAPPNPRRKVGPNRITIENLRKSDT--GNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
             ++  P +     G   I I +  K +T  G Y C A N  G    +  V   + +P  
Sbjct: 87  LLVTMKPDS-----GTLIINIMSEGKVETYEGVYQCTARNERGAAISNNIVVRPSRSPLW 141

Query: 222 TEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKITDV 277
           T+   +  T+ +G+ +VL CR   G P P + W+ N  Q+     R +    GDL  ++V
Sbjct: 142 TKEKLEPITLRNGQPLVLPCRPPVGLPSPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNV 201

Query: 278 AFADSGE-YTCFAR-NKLGTAQGSGSLTVKE------HTHITDQPEDYEVEAGQSATFR- 328
              D+ E Y C+AR N   T Q    ++VK       +  I     D E    +S+  R 
Sbjct: 202 LPEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFYGAKSSRERP 261

Query: 329 -------CNAVSDPSLKLSIV---------------WLR--GSEPIDFESEPRFVQSNDY 364
                   NA +   L+ +++               W++  G+ PI+      F ++   
Sbjct: 262 PTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINR----TFYRNFQK 317

Query: 365 SLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
           +L + + SE DSG Y C A+  L  I    ++TV+     + AP N  L
Sbjct: 318 TLQIIQVSEADSGNYQCIAKNALGAIYHTISVTVKAAPYWIMAPQNLVL 366


>gi|119607692|gb|EAW87286.1| sidekick homolog 1 (chicken), isoform CRA_a [Homo sapiens]
          Length = 2072

 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 189/625 (30%), Positives = 276/625 (44%), Gaps = 44/625 (7%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
           + V   + +  L CI    P+      W ++GV      RI+ G  ++G+ L I +   +
Sbjct: 161 RSVVAGSSETTLECIASARPVEDLSVTWKRNGV------RITSGLHSFGRRLTISNPTSA 214

Query: 98  DQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPE 154
           D G Y CE +      E    +  L ++  PYFT EPE  I+A  EETV   C+A G+P 
Sbjct: 215 DTGPYVCEAALPGSAFEPARATAFLFIIEPPYFTAEPESRISAEVEETVDIGCQAMGVPL 274

Query: 155 PEIHWVHNGKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P + W  +   IS+   NPR KV     + I+ LR  D+G + C A+N  G +    Y++
Sbjct: 275 PTLQWYKDAISISRLQ-NPRYKVLASGGLRIQKLRPEDSGIFQCFASNEGGEIQTHTYLD 333

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V   AP  T+ P D    DG T +L C V GAPKP + W      L  G     R+ +LE
Sbjct: 334 VTNIAPVFTQRPVDTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLE 393

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L+I  V   D+G YTC+A N  G+   S +LTV   T I   PED+ V  G +AT  
Sbjct: 394 SGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNRTSIVHPPEDHVVIKGTTATLH 453

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A  DP + L  VW + +  +   S  R V   D SL ++++   D G Y+C   +E  
Sbjct: 454 CGATHDPRVSLRYVWKKDNVALTPSSTSRIVVEKDGSLLISQTWSGDIGDYSCEIVSEGG 513

Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV-SWNPVSPQSLRGHFRGYKVQTWTEKD 447
                A L V     +P N  +        AVV SW  V P         Y V+  +E +
Sbjct: 514 NDSRMARLEVIELPHSPQNLLVSPNSSHSHAVVLSW--VRPFDGNSPILYYIVEL-SENN 570

Query: 448 GEGSIRELIVNKG-ESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEG 502
               +   + N G E T   V    PA     RV A N    G Y+   S ++    P  
Sbjct: 571 SPWKVH--LSNVGPEMTGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPS 628

Query: 503 VPGTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560
            P   +++ A    + +  ++W  P +   NGVL GY ++Y+ + G   G   +R   I+
Sbjct: 629 APP--KNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYR-LAGLP-GEYQQR--NIT 682

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEGRGSTP 615
            P      +  L   T+Y I +A Y  AG G  S+      L  VP   P NV+      
Sbjct: 683 SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNS 742

Query: 616 NNLVISWTAMPEIEHNAPHFKYRIF 640
             +   W   P+   N  +  Y++ 
Sbjct: 743 TTIQFLWNPPPQQFINGINQGYKLL 767



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 176/679 (25%), Positives = 265/679 (39%), Gaps = 113/679 (16%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN-GVGEAK-SYSI 118
           P PQ  W ++G  I PS+RI+       L+I     SD G+Y  +  N   GE K S  I
Sbjct: 78  PRPQVTWFREGHKIIPSNRIAI-TLENQLVILATTTSDAGAYYVQAVNEKNGENKTSPFI 136

Query: 119 DLSV--------LAAPYFTVEP--EFINAAEEETVTFECKASGLP--EPEIHWVHNGKPI 166
            LS+          AP   V P    + A   ET T EC AS  P  +  + W  NG  I
Sbjct: 137 HLSIARDVGTPETMAPTIVVPPGNRSVVAGSSET-TLECIASARPVEDLSVTWKRNGVRI 195

Query: 167 SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV---LAHAPEITE 223
           +    +  R     R+TI N   +DTG Y C A    G  ++         +   P  T 
Sbjct: 196 TSGLHSFGR-----RLTISNPTSADTGPYVCEAALP-GSAFEPARATAFLFIIEPPYFTA 249

Query: 224 APKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITDVAF 279
            P+   + +  +TV + C+  G P P + W  +      L   RY +L +G L+I  +  
Sbjct: 250 EPESRISAEVEETVDIGCQAMGVPLPTLQWYKDAISISRLQNPRYKVLASGGLRIQKLRP 309

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHI-TDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            DSG + CFA N+ G  Q    L V     + T +P D  V  G +A  RC     P  K
Sbjct: 310 EDSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRPVDTTVTDGMTAILRCEVSGAP--K 367

Query: 339 LSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            +I W R +  +   S   PRF+      L +      D+G YTC A      + A ATL
Sbjct: 368 PAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATL 427

Query: 397 TV---QVPLEAPSNFTLIQVIDA------------------KKAVVSWNPVSPQSLRGHF 435
           TV      +  P +  +I+   A                  KK  V+  P S   +    
Sbjct: 428 TVWNRTSIVHPPEDHVVIKGTTATLHCGATHDPRVSLRYVWKKDNVALTPSSTSRIVVEK 487

Query: 436 RGYKV--QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
            G  +  QTW+   G+ S    IV++G + +             AR+            E
Sbjct: 488 DGSLLISQTWSGDIGDYSCE--IVSEGGNDS-----------RMARL------------E 522

Query: 494 IISFVTPEGVPGTVQSLEAIPLG--SSAFYLKWVKPEQPNGVLMGYKIKYQ------SVK 545
           +I        P + Q+L   P    S A  L WV+P   N  ++ Y ++         V 
Sbjct: 523 VIEL------PHSPQNLLVSPNSSHSHAVVLSWVRPFDGNSPILYYIVELSENNSPWKVH 576

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG---AESKYLFY--- 599
            + VGP +           T   ++GL P+  Y+  +    + G G   AE+  L     
Sbjct: 577 LSNVGPEM-----------TGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEE 625

Query: 600 VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
            P   P N+   G T  ++++ W   PE EHN     Y + +R       + Q ++    
Sbjct: 626 PPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNITSPE 685

Query: 660 QSELVLANQPTFQPYEIKV 678
            +  ++ +   +  YEI+V
Sbjct: 686 VNYCLVTDLIIWTQYEIQV 704



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 101/240 (42%), Gaps = 23/240 (9%)

Query: 389 FIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
           F  A    T+Q VP   P N    + +++      WNP   Q + G  +GYK+  W    
Sbjct: 715 FSRAVTEYTLQGVPTAPPQNVQ-TEAVNSTTIQFLWNPPPQQFINGINQGYKLLAWPADA 773

Query: 448 GEGSIRELI------VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
            E      I      V+ G    T + KF   +  F  VL F    +GPPS      T E
Sbjct: 774 PEAVTVVTIAPDFHGVHHGH--ITNLKKF---TAYFTSVLCFTTPGDGPPSTPQLVWTQE 828

Query: 502 GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
             PG V  L    +  ++  + W +P + NG++ GY+I ++ V G        RL +  +
Sbjct: 829 DKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQISWE-VYGRNN----SRLTHTLN 883

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVIS 621
            TT   K+ GL   T Y I +A  T  G G  +     +    P ++ G    P+NLVIS
Sbjct: 884 STTHEYKIQGLSSLTTYTIDVAAVTAVGTGLVTSST--ISSGVPPDLPG---APSNLVIS 938



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 2/142 (1%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP N   +  + A +  V+W+P  P+S  G+ +GYK+  W E D +    ++ V   
Sbjct: 1560 PAMAPQNVQ-VTPLTASQLEVTWDPPPPESQNGNIQGYKIYYW-EADSQNETEKMKVLFL 1617

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
                  +      +K    + AFN A +GP S+     T +  PG    L    + S+  
Sbjct: 1618 PEPVVRLKNLTSHTKYLVSISAFNAAGDGPKSDPQQGRTHQAAPGAPSFLAFSEITSTTL 1677

Query: 521  YLKWVKPEQPNGVLMGYKIKYQ 542
             + W +P   NG+L GY++ Y+
Sbjct: 1678 NVSWGEPAAANGILQGYRVVYE 1699



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 10/207 (4%)

Query: 397  TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIRE 454
            T+Q P +       ++        + W P+      G+    GY+++ W       ++ +
Sbjct: 1027 TLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRSDLQSSAVAQ 1086

Query: 455  LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEAI 513
            ++ ++ E   T +++     +   ++ AFN    GP SE++   T E VP    +++ A 
Sbjct: 1087 VVSDRLEREFT-IEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRESVPSAAPENVSAE 1145

Query: 514  PLGSSAFYLKWVK-PEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAG 571
             + S+   L W   PEQ  NG+++GYKI +++ K     P   R   +    T SA LAG
Sbjct: 1146 AVSSTQILLTWTSVPEQDQNGLILGYKILFRA-KDLDPEP---RSHIVRGNHTQSALLAG 1201

Query: 572  LEPSTKYRIHLAGYTKAGDGAESKYLF 598
            L     Y + +  +T+ G+G  S  L 
Sbjct: 1202 LRKFVLYELQVLAFTRIGNGVPSTPLI 1228



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 83/218 (38%), Gaps = 21/218 (9%)

Query: 181 RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC 240
           R  I +L+K D G Y C   N +G + +      +A+     +  + +    G+  +L  
Sbjct: 12  RYIIPSLQKLDAGFYRCVVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVSQGRAAILNL 71

Query: 241 R-VFGAPKPEVNWIH-NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNK------ 292
             +   P+P+V W     K +   R  I     L I     +D+G Y   A N+      
Sbjct: 72  LPITSYPRPQVTWFREGHKIIPSNRIAITLENQLVILATTTSDAGAYYVQAVNEKNGENK 131

Query: 293 ------LGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLR 345
                 L  A+  G+      T I   P +  V AG S  T  C A + P   LS+ W R
Sbjct: 132 TSPFIHLSIARDVGTPETMAPT-IVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKR 190

Query: 346 GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
               I        + S    LT++  +  D+G Y C A
Sbjct: 191 NGVRIT-----SGLHSFGRRLTISNPTSADTGPYVCEA 223



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 3/144 (2%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V  Q   G   GYK+  +  KD +   R  IV  
Sbjct: 1134 VPSAAPENVS-AEAVSSTQILLTWTSVPEQDQNGLILGYKI-LFRAKDLDPEPRSHIVRG 1191

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-IISFVTPEGVPGTVQSLEAIPLGSS 518
              + +  +           +VLAF    NG PS  +I   T +  PG    L    +  +
Sbjct: 1192 NHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLT 1251

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQ 542
            +  + W  PE+PNG+++GY+I Y+
Sbjct: 1252 SVRIVWQPPEEPNGIILGYQIAYR 1275



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 30/229 (13%)

Query: 391  EAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV--QTWTEKD 447
            E +A  T+Q VP E P + +      +   ++ W P   +SL G  +GY++  +    + 
Sbjct: 1426 ETEAVTTLQDVPGEPPGSVSATPHTTSS-VLIQWQPPRDESLNGLLQGYRIYYRELEYEA 1484

Query: 448  GEGS----IRELIVNKGESTTTEVDKFVPAS-----------KNFARVLAFNGAYN---- 488
            G G+    ++  I  + E T     K V +S           K + R      AYN    
Sbjct: 1485 GSGTEAKTLKNPIALRAELTAQSSFKTVNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGE 1544

Query: 489  GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
             P S  +     E  P    Q+++  PL +S   + W    PE  NG + GYKI Y    
Sbjct: 1545 SPASAPVEVFVGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEAD 1604

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
                   ++ L ++ +P     +L  L   TKY + ++ +  AGDG +S
Sbjct: 1605 SQNETEKMKVL-FLPEPV---VRLKNLTSHTKYLVSISAFNAAGDGPKS 1649



 Score = 43.9 bits (102), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 104/257 (40%), Gaps = 27/257 (10%)

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFVTPEGVPGTVQ-SLEAIPLGSS 518
            E+T   VD+  P +    R+ A N   +    SE  +  T + VPG    S+ A P  +S
Sbjct: 1393 EATACVVDRLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTS 1452

Query: 519  AFYLKWVKP--EQPNGVLMGYKIKYQSVK-----GTKV----GPLLERLPYI-------- 559
            +  ++W  P  E  NG+L GY+I Y+ ++     GT+      P+  R            
Sbjct: 1453 SVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKNPIALRAELTAQSSFKTV 1512

Query: 560  -SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYV----PFKNPDNVEGRGS 613
             S  T+T  +L  L+   +Y + +  Y   G+  A +    +V    P   P NV+    
Sbjct: 1513 NSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTPL 1572

Query: 614  TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
            T + L ++W   P    N     Y+I++   ++     +  VL   +  + L N  +   
Sbjct: 1573 TASQLEVTWDPPPPESQNGNIQGYKIYYWEADSQNETEKMKVLFLPEPVVRLKNLTSHTK 1632

Query: 674  YEIKVVQTWTEKDGEGS 690
            Y + +       DG  S
Sbjct: 1633 YLVSISAFNAAGDGPKS 1649


>gi|32351274|gb|AAP75619.1| sidekick-like protein 1 [Homo sapiens]
          Length = 2213

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 188/625 (30%), Positives = 274/625 (43%), Gaps = 44/625 (7%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
           + V   + +  L CI    P+      W ++GV      RI+ G  ++G+ L I +   +
Sbjct: 302 RSVVAGSSETTLECIASARPVEDLSVTWKRNGV------RITSGLHSFGRHLTISNPTSA 355

Query: 98  DQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPE 154
           D G Y CE +      E    +  L ++  PYFT EPE  I+A  EETV   C+A G+P 
Sbjct: 356 DTGPYVCEAALPGSAFEPARATAFLFIIEPPYFTAEPESRISAEVEETVDIGCQAMGVPL 415

Query: 155 PEIHWVHNGKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P + W  +   IS+   NPR KV     + I+ LR  D+G + C A+N  G +    Y++
Sbjct: 416 PTLQWYKDAISISRLQ-NPRYKVLASGGLRIQKLRPEDSGIFQCFASNEGGEIQTHTYLD 474

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V   AP  T+ P D    DG T +L C V GAPKP + W      L  G     R+ +LE
Sbjct: 475 VTNIAPVFTQRPVDTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLE 534

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L+I  V   D+G YTC+A N  G+   S +LTV   T I   PED+ V  G +AT  
Sbjct: 535 SGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNRTSIVHPPEDHVVIKGTTATLH 594

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A  DP + L  VW + +  +   S  R V   D SL ++++   D G Y+C   +E  
Sbjct: 595 CGATHDPRVSLRYVWKKDNVALTPSSTSRIVVEKDGSLLISQTWSGDIGDYSCEIVSEGG 654

Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV-SWNPVSPQSLRGHFRGYKVQTWTEKD 447
                A L V     +P N  +        AVV SW  V P         Y V+     +
Sbjct: 655 NDSRMARLEVIELPHSPQNLLVSPNSSHSHAVVLSW--VRPFDGNSPILYYIVEL---SE 709

Query: 448 GEGSIRELIVNKG-ESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEG 502
                +  + N G E T   V    PA     RV A N    G Y+   S ++    P  
Sbjct: 710 NSSPWKVHLSNVGPEMTGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPS 769

Query: 503 VPGTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560
            P   +++ A    + +  ++W  P +   NGVL GY ++Y+ + G   G   +R   I+
Sbjct: 770 APP--KNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYR-LAGLP-GEYQQR--NIT 823

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEGRGSTP 615
            P      +  L   T+Y I +A Y  AG G  S+      L  VP   P NV+      
Sbjct: 824 SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNS 883

Query: 616 NNLVISWTAMPEIEHNAPHFKYRIF 640
             +   W   P+   N  +  Y++ 
Sbjct: 884 TTIQFLWNPPPQQFINGINQGYKLL 908



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 175/679 (25%), Positives = 264/679 (38%), Gaps = 113/679 (16%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN-GVGEAK-SYSI 118
           P PQ  W ++G  I PS+RI+       L+I     SD G+Y  +  N   GE K S  I
Sbjct: 219 PRPQVTWFREGHKIIPSNRIAI-TLENQLVILATTTSDAGAYYVQAVNEKNGENKTSPFI 277

Query: 119 DLSV--------LAAPYFTVEP--EFINAAEEETVTFECKASGLP--EPEIHWVHNGKPI 166
            LS+          AP   V P    + A   ET T EC AS  P  +  + W  NG  I
Sbjct: 278 HLSIARDVGTPETMAPTIVVPPGNRSVVAGSSET-TLECIASARPVEDLSVTWKRNGVRI 336

Query: 167 SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV---LAHAPEITE 223
           +    +  R      +TI N   +DTG Y C A    G  ++         +   P  T 
Sbjct: 337 TSGLHSFGR-----HLTISNPTSADTGPYVCEAALP-GSAFEPARATAFLFIIEPPYFTA 390

Query: 224 APKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITDVAF 279
            P+   + +  +TV + C+  G P P + W  +      L   RY +L +G L+I  +  
Sbjct: 391 EPESRISAEVEETVDIGCQAMGVPLPTLQWYKDAISISRLQNPRYKVLASGGLRIQKLRP 450

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHI-TDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            DSG + CFA N+ G  Q    L V     + T +P D  V  G +A  RC     P  K
Sbjct: 451 EDSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRPVDTTVTDGMTAILRCEVSGAP--K 508

Query: 339 LSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            +I W R +  +   S   PRF+      L +      D+G YTC A      + A ATL
Sbjct: 509 PAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATL 568

Query: 397 TV---QVPLEAPSNFTLIQVIDA------------------KKAVVSWNPVSPQSLRGHF 435
           TV      +  P +  +I+   A                  KK  V+  P S   +    
Sbjct: 569 TVWNRTSIVHPPEDHVVIKGTTATLHCGATHDPRVSLRYVWKKDNVALTPSSTSRIVVEK 628

Query: 436 RGYKV--QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
            G  +  QTW+   G+ S    IV++G + +             AR+            E
Sbjct: 629 DGSLLISQTWSGDIGDYSCE--IVSEGGNDS-----------RMARL------------E 663

Query: 494 IISFVTPEGVPGTVQSLEAIPLG--SSAFYLKWVKPEQPNGVLMGYKIKYQ------SVK 545
           +I        P + Q+L   P    S A  L WV+P   N  ++ Y ++         V 
Sbjct: 664 VIEL------PHSPQNLLVSPNSSHSHAVVLSWVRPFDGNSPILYYIVELSENSSPWKVH 717

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG---AESKYLFY--- 599
            + VGP +           T   ++GL P+  Y+  +    + G G   AE+  L     
Sbjct: 718 LSNVGPEM-----------TGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEE 766

Query: 600 VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
            P   P N+   G T  ++++ W   PE EHN     Y + +R       + Q ++    
Sbjct: 767 PPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNITSPE 826

Query: 660 QSELVLANQPTFQPYEIKV 678
            +  ++ +   +  YEI+V
Sbjct: 827 VNYCLVTDLIIWTQYEIQV 845



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 101/240 (42%), Gaps = 23/240 (9%)

Query: 389  FIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
            F  A    T+Q VP   P N    + +++      WNP   Q + G  +GYK+  W    
Sbjct: 856  FSRAVTEYTLQGVPTAPPQNVQ-TEAVNSTTIQFLWNPPPQQFINGINQGYKLLAWPADA 914

Query: 448  GEGSIRELI------VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
             E      I      V+ G    T + KF   +  F  VL F    +GPPS      T E
Sbjct: 915  PEAVTVVTIAPDFHGVHHGH--ITNLKKF---TAYFTSVLCFTTPGDGPPSTPQLVWTQE 969

Query: 502  GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
              PG V  L    +  ++  + W +P + NG++ GY+I ++ V G        RL +  +
Sbjct: 970  DKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQISWE-VYGRND----SRLTHTLN 1024

Query: 562  PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVIS 621
             TT   K+ GL   T Y I +A  T  G G  +     +    P ++ G    P+NLVIS
Sbjct: 1025 STTHEYKIQGLSSLTTYTIDVAAVTAVGTGLVTSST--ISSGVPPDLPG---APSNLVIS 1079



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 2/142 (1%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP N   +  + A +  V+W+P  P+S  G+ +GYK+  W E D +    ++ V   
Sbjct: 1701 PAMAPQNVQ-VTPLTASQLEVTWDPPPPESQNGNIQGYKIYYW-EADSQNETEKMKVLFL 1758

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
                  +      +K    + AFN A +GP S+     T +  PG    L    + S+  
Sbjct: 1759 PEPVVRLKNLTSHTKYLVSISAFNAAGDGPKSDPQQGRTHQAAPGAPSFLAFSEITSTTL 1818

Query: 521  YLKWVKPEQPNGVLMGYKIKYQ 542
             + W +P   NG+L GY++ Y+
Sbjct: 1819 NVSWGEPAAANGILQGYRVVYE 1840



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 100/275 (36%), Gaps = 29/275 (10%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           APYF  EP       E   +   C A G    E  W+ +   ++             +  
Sbjct: 103 APYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMRDDSELTT-------YSSEYKYI 155

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR-V 242
           I +L+K D G Y C   N +G + +      +A+     +  + +    G+  +L    +
Sbjct: 156 IPSLQKLDAGFYRCVVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVSQGRAAILNLLPI 215

Query: 243 FGAPKPEVNWIH-NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNK--------- 292
              P+P+V W     K +   R  I     L I     +D+G Y   A N+         
Sbjct: 216 TSYPRPQVTWFREGHKIIPSNRIAITLENQLVILATTTSDAGAYYVQAVNEKNGENKTSP 275

Query: 293 ---LGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSE 348
              L  A+  G+      T I   P +  V AG S  T  C A + P   LS+ W R   
Sbjct: 276 FIHLSIARDVGTPETMAPT-IVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGV 334

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            I        + S    LT++  +  D+G Y C A
Sbjct: 335 RIT-----SGLHSFGRHLTISNPTSADTGPYVCEA 364



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 10/207 (4%)

Query: 397  TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIRE 454
            T+Q P +       ++        + W P+      G+    GY+++ W       ++ +
Sbjct: 1168 TLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRSDLQSSAVAQ 1227

Query: 455  LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEAI 513
            ++ ++ E   T +++     +   ++ AFN    GP SE++   T E VP    +++ A 
Sbjct: 1228 VVSDRLEREFT-IEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRESVPSAAPENVSAE 1286

Query: 514  PLGSSAFYLKWVK-PEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAG 571
             + S+   L W   PEQ  NG+++GYKI +++ K     P   R   +    T SA LAG
Sbjct: 1287 AVSSTQILLTWTSVPEQDQNGLILGYKILFRA-KDLDPEP---RSHIVRGNHTQSALLAG 1342

Query: 572  LEPSTKYRIHLAGYTKAGDGAESKYLF 598
            L     Y + +  +T+ G+G  S  L 
Sbjct: 1343 LRKFVLYELQVLAFTRIGNGVPSTPLI 1369



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 3/144 (2%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V  Q   G   GYK+  +  KD +   R  IV  
Sbjct: 1275 VPSAAPENVS-AEAVSSTQILLTWTSVPEQDQNGLILGYKI-LFRAKDLDPEPRSHIVRG 1332

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-IISFVTPEGVPGTVQSLEAIPLGSS 518
              + +  +           +VLAF    NG PS  +I   T +  PG    L    +  +
Sbjct: 1333 NHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLT 1392

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQ 542
            +  + W  PE+PNG+++GY+I Y+
Sbjct: 1393 SVRIVWQPPEEPNGIILGYQIAYR 1416



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 30/229 (13%)

Query: 391  EAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV--QTWTEKD 447
            E +A  T+Q VP E P + +      +   ++ W P   +SL G  +GY++  +    + 
Sbjct: 1567 ETEAVTTLQDVPGEPPGSVSATPHTTSS-VLIQWQPPRDESLNGLLQGYRIYYRELEYEA 1625

Query: 448  GEGS----IRELIVNKGESTTTEVDKFVPAS-----------KNFARVLAFNGAYN---- 488
            G G+    ++  I    E T     K V +S           K + R      AYN    
Sbjct: 1626 GSGTEAKTLKNPIALXAELTAQSSFKTVNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGE 1685

Query: 489  GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
             P S  +     E  P    Q+++  PL +S   + W    PE  NG + GYKI Y    
Sbjct: 1686 SPASAPVEVFVGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEAD 1745

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
                   ++ L ++ +P     +L  L   TKY + ++ +  AGDG +S
Sbjct: 1746 SQNETEKMKVL-FLPEPV---VRLKNLTSHTKYLVSISAFNAAGDGPKS 1790



 Score = 43.5 bits (101), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 103/257 (40%), Gaps = 27/257 (10%)

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFVTPEGVPGTVQ-SLEAIPLGSS 518
            E+T   VD+  P +    R+ A N   +    SE  +  T + VPG    S+ A P  +S
Sbjct: 1534 EATACVVDRLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTS 1593

Query: 519  AFYLKWVKP--EQPNGVLMGYKIKYQSVK-----GTKVGPLLERLPYI------------ 559
            +  ++W  P  E  NG+L GY+I Y+ ++     GT+   L   +               
Sbjct: 1594 SVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKNPIALXAELTAQSSFKTV 1653

Query: 560  -SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYV----PFKNPDNVEGRGS 613
             S  T+T  +L  L+   +Y + +  Y   G+  A +    +V    P   P NV+    
Sbjct: 1654 NSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTPL 1713

Query: 614  TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
            T + L ++W   P    N     Y+I++   ++     +  VL   +  + L N  +   
Sbjct: 1714 TASQLEVTWDPPPPESQNGNIQGYKIYYWEADSQNETEKMKVLFLPEPVVRLKNLTSHTK 1773

Query: 674  YEIKVVQTWTEKDGEGS 690
            Y + +       DG  S
Sbjct: 1774 YLVSISAFNAAGDGPKS 1790



 Score = 40.4 bits (93), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 63/166 (37%), Gaps = 8/166 (4%)

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
           TE    +  ++G  +VLTC   G+   E  W+ +  ELT    T        I  +   D
Sbjct: 108 TEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMRDDSELT----TYSSEYKYIIPSLQKLD 163

Query: 282 SGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           +G Y C  RN++G   Q    + V       D  +   V  G++A      ++    +  
Sbjct: 164 AGFYRCVVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVSQGRAAILNLLPITS-YPRPQ 222

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + W R    I   +       N   +  T +S  D+G Y  +A  E
Sbjct: 223 VTWFREGHKIIPSNRIAITLENQLVILATTTS--DAGAYYVQAVNE 266


>gi|45383103|ref|NP_989869.1| protein sidekick-2 [Gallus gallus]
 gi|23194256|gb|AAN15076.1| sidekick-2 [Gallus gallus]
          Length = 2217

 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 178/603 (29%), Positives = 266/603 (44%), Gaps = 32/603 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           R   V     +V + C+    PL +   IW KDGVPI  S  IS  +Y + L I +    
Sbjct: 267 RNTSVVAGTSEVTMECVANARPLIKLHIIWKKDGVPI--SSGIS--DYSRRLTILNPTLG 322

Query: 98  DQGSYTCE--VSNGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPE 154
           D G Y CE  + +    A +    LSVL  P F  EPE  I A  E+ V   C+A G+P 
Sbjct: 323 DSGYYECEAVLRSSSVPAVAEGAYLSVLEPPQFVKEPERHITAEMEKVVAIPCQAKGVPP 382

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
           P++ W  +   I     +  + +    + I  L   DTG + C A N+ G V    Y+ V
Sbjct: 383 PDMAWYKDASLIHPEQLSRFQLLADGSLQISGLLPDDTGMFQCFARNAAGEVQTTTYLAV 442

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILET 269
            + AP IT  P+D   +DG +V+L C   GAP+P + W   ++ L  G     R+T+LE+
Sbjct: 443 TSIAPNITRGPQDSTVIDGMSVILNCETSGAPRPAITWQKGERILASGSVQLPRFTLLES 502

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L ++     D+G YTC A N  G  + S  L V   T ITD P+D  V  G  A+  C
Sbjct: 503 GSLLVSPAHLTDAGTYTCLATNSRGVDEASADLVVWARTRITDPPQDQSVIKGTKASMSC 562

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
               DPS+ +  +W +   P+  ES PR       +L ++++   D G YTC+  +    
Sbjct: 563 GVTHDPSVDVRYIWEKDGAPLGTESGPRLRLDETGTLHISQTWSGDIGTYTCKVLSAGGN 622

Query: 390 IEAQATLTV-QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
               A L V Q+P    S   ++  ++ +   ++W    P         Y V+  +E + 
Sbjct: 623 DSRSAHLRVRQLPHAPESPVAVLSPLEKRAINLTW--AKPFDGNSPLLRYLVEI-SENNA 679

Query: 449 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT-PEGVP-GT 506
             ++    V+  E T   V   VPA     R+ A N       S+    V+ PE  P   
Sbjct: 680 PWTVLLASVDP-ELTWVVVRGLVPARSYQFRLCAVNDVGRSQFSKDTERVSLPEEPPFAP 738

Query: 507 VQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT 564
            Q++ A    + +  ++W  P +   NGVL GY I+Y  + G  VG    +   I++   
Sbjct: 739 PQNVIASGRTNQSIMIQWQPPPESHQNGVLKGYIIRY-CLAGLPVG---YQFKNITNADV 794

Query: 565 TSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLV 619
            +  L  L   T Y I +A Y  AG G  S       L  VP   P NV+   +    + 
Sbjct: 795 NNLLLEDLIIWTNYEIEVAAYNSAGLGVYSMKVTEWTLQGVPTVPPGNVQTEATNSTTIR 854

Query: 620 ISW 622
            +W
Sbjct: 855 FTW 857



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 182/680 (26%), Positives = 270/680 (39%), Gaps = 69/680 (10%)

Query: 35  QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV 94
           QQ V+  +   +R  ++  F      P PQ  W +DG  I+PS RI+      +L+I   
Sbjct: 166 QQSVSHGEAAVIRAPRIASF------PQPQVTWFRDGRKISPSSRIAI-TLENTLVILST 218

Query: 95  EFSDQGSYTCE-VSNGVGEAK-SYSIDLSVL--------AAPYFTVEPEFIN-AAEEETV 143
              D G Y  + V++  G+ K S  I L+V          AP   V P   +  A    V
Sbjct: 219 VAPDAGRYYVQAVNDKNGDNKTSQPITLTVANVGGPADPIAPTIIVPPRNTSVVAGTSEV 278

Query: 144 TFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA-- 199
           T EC A+  P  ++H  W  +G PIS    +  R     R+TI N    D+G Y C A  
Sbjct: 279 TMECVANARPLIKLHIIWKKDGVPISSGISDYSR-----RLTILNPTLGDSGYYECEAVL 333

Query: 200 -TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDG-KTVVLTCRVFGAPKPEVNW----- 252
            ++S+  V +  Y++VL   P+  + P+   T +  K V + C+  G P P++ W     
Sbjct: 334 RSSSVPAVAEGAYLSVL-EPPQFVKEPERHITAEMEKVVAIPCQAKGVPPPDMAWYKDAS 392

Query: 253 -IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHI 310
            IH ++     R+ +L  G L+I+ +   D+G + CFARN  G  Q +  L V     +I
Sbjct: 393 LIHPEQL---SRFQLLADGSLQISGLLPDDTGMFQCFARNAAGEVQTTTYLAVTSIAPNI 449

Query: 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTV 368
           T  P+D  V  G S    C     P  + +I W +G   +   S   PRF      SL V
Sbjct: 450 TRGPQDSTVIDGMSVILNCETSGAP--RPAITWQKGERILASGSVQLPRFTLLESGSLLV 507

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
           + +   D+G YTC A       EA A L V              VI   KA +S      
Sbjct: 508 SPAHLTDAGTYTCLATNSRGVDEASADLVVWARTRITDPPQDQSVIKGTKASMSCGVT-- 565

Query: 429 QSLRGHFRGYKVQTWTEKDGE--GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
                H     V+   EKDG   G+     +   E+ T  + +              +  
Sbjct: 566 -----HDPSVDVRYIWEKDGAPLGTESGPRLRLDETGTLHISQTWSGDIGTYTCKVLSAG 620

Query: 487 YNGPPSEIISFVTPEGVPGTVQSLEAI--PLGSSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
            N   S  +       +P   +S  A+  PL   A  L W KP   N  L+ Y ++  S 
Sbjct: 621 GNDSRSAHLRV---RQLPHAPESPVAVLSPLEKRAINLTWAKPFDGNSPLLRYLVEI-SE 676

Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
                  LL  +    DP  T   + GL P+  Y+  L      G    SK    V    
Sbjct: 677 NNAPWTVLLASV----DPELTWVVVRGLVPARSYQFRLCAVNDVGRSQFSKDTERVSLPE 732

Query: 601 --PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDW 658
             PF  P NV   G T  +++I W   PE   N     Y I +        +   ++ + 
Sbjct: 733 EPPFAPPQNVIASGRTNQSIMIQWQPPPESHQNGVLKGYIIRYCLAGLPVGYQFKNITNA 792

Query: 659 RQSELVLANQPTFQPYEIKV 678
             + L+L +   +  YEI+V
Sbjct: 793 DVNNLLLEDLIIWTNYEIEV 812



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 138/587 (23%), Positives = 229/587 (39%), Gaps = 68/587 (11%)

Query: 51   VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEV 106
            V L C   G P P   W K G  I  S  +    +      SL++     +D G+YTC  
Sbjct: 464  VILNCETSGAPRPAITWQK-GERILASGSVQLPRFTLLESGSLLVSPAHLTDAGTYTCLA 522

Query: 107  SN--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--WVHN 162
            +N  GV EA   S DL V A    T  P+  +  +    +  C  +  P  ++   W  +
Sbjct: 523  TNSRGVDEA---SADLVVWARTRITDPPQDQSVIKGTKASMSCGVTHDPSVDVRYIWEKD 579

Query: 163  GKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAP 219
            G P+      PR ++     + I      D G Y C   ++ G   +  ++ V  L HAP
Sbjct: 580  GAPLGTES-GPRLRLDETGTLHISQTWSGDIGTYTCKVLSAGGNDSRSAHLRVRQLPHAP 638

Query: 220  EITEAPKDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVA 278
            E   A      ++ + + LT  + F    P + ++    E       +L + D ++T V 
Sbjct: 639  ESPVAVLSP--LEKRAINLTWAKPFDGNSPLLRYLVEISENNAPWTVLLASVDPELTWVV 696

Query: 279  F-----ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS--ATFRCN- 330
                  A S ++   A N +G +Q S      + T     PE+      Q+  A+ R N 
Sbjct: 697  VRGLVPARSYQFRLCAVNDVGRSQFS------KDTERVSLPEEPPFAPPQNVIASGRTNQ 750

Query: 331  -----------AVSDPSLKLSIV-WLRGSEPIDFESEPRFVQSNDYS------LTVTKSS 372
                       +  +  LK  I+ +     P+ ++   + + + D +      L +  + 
Sbjct: 751  SIMIQWQPPPESHQNGVLKGYIIRYCLAGLPVGYQF--KNITNADVNNLLLEDLIIWTNY 808

Query: 373  ELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            E++   Y             + TL   VP   P N    +  ++     +WNP SPQ + 
Sbjct: 809  EIEVAAYNSAGLGVYSMKVTEWTLQ-GVPTVPPGNVQ-TEATNSTTIRFTWNPPSPQFIN 866

Query: 433  GHFRGYKVQTWT-EKDGEGSIRELIVNKGEST----TTEVDKFVPASKNFARVLAFNGAY 487
            G  +GYK+  W  E + E ++  +  N  +S        + KF   ++    VL F    
Sbjct: 867  GINQGYKLIAWEPEHEEEATVVTVRPNFQDSVHVGYVVGLKKF---TEYLTSVLCFTTPG 923

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY+I ++    T
Sbjct: 924  DGPRSPPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPLEKNGILTGYRISWEEYNRT 983

Query: 548  KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
                   R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 984  NT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 1025



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 115/298 (38%), Gaps = 31/298 (10%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           +PYF  EP       E   +   C A G    E  W+HN + +++            R  
Sbjct: 70  SPYFKTEPVRSQVHLEGNRLVLTCMAEGSWPLEFKWLHNSRELTKFSLE-------YRYM 122

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RV 242
           I +L ++  G Y C   N +G + +      +A+     ++   +    G+  V+   R+
Sbjct: 123 ITSLDRTHAGFYRCIVRNRMGALLQRQTEVQVAYMGSFEDSETQQSVSHGEAAVIRAPRI 182

Query: 243 FGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSG 300
              P+P+V W  + ++++   R  I     L I      D+G Y   A N K G  + S 
Sbjct: 183 ASFPQPQVTWFRDGRKISPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQ 242

Query: 301 SLTVKEHT----------HITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEP 349
            +T+               I   P +  V AG S  T  C A + P +KL I+W +   P
Sbjct: 243 PITLTVANVGGPADPIAPTIIVPPRNTSVVAGTSEVTMECVANARPLIKLHIIWKKDGVP 302

Query: 350 IDFESEPRFVQSNDYS--LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAP 405
           I           +DYS  LT+   +  DSG Y C A      + A A       LE P
Sbjct: 303 IS-------SGISDYSRRLTILNPTLGDSGYYECEAVLRSSSVPAVAEGAYLSVLEPP 353



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P  AP N   ++   A +  V+W P   +S  G  +GYK+  W  +    S R   +  
Sbjct: 1667 MPTGAPQNVA-VKAATATQLDVTWEPPPTESQNGDIQGYKIHFWEAQRQNESARVKTLFL 1725

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E T  ++      +  +  + AFN A +GP S  ++  T +  P    S+    L +++
Sbjct: 1726 PE-TGVKLKNLTGYTSYWVSIAAFNAAGDGPRSTPVTARTQQAAPSAPGSIRFSELTTTS 1784

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P  PNG+L GY++ Y+
Sbjct: 1785 VNVSWEPPPLPNGILEGYRLVYE 1807



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 83/199 (41%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   PSN +  Q   +   +V W+ +      G   GYKV  + EKD E   +  +   
Sbjct: 1243 VPSSGPSNVS-AQATSSSNMLVRWSDIPEADCNGLILGYKVM-FKEKDSEARAQFWLAEG 1300

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           RVLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1301 NTSRSAQLTGLGKFMLYEIRVLAFTRIGDGVPSRPPILERTLDDVPGPPVGMLFPEVRTT 1360

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y++ ++    T    + E L     P+T      GL+P   Y
Sbjct: 1361 SVRLIWQPPTAPNGIILAYQLTHRLNTTTANAAVSEVL----GPSTRQYTATGLQPEATY 1416

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1417 LFSITAQTRKGWGEAAEAL 1435



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 14/206 (6%)

Query: 397  TVQVPLE-APSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGEG-SI 452
            T+Q P + AP+N TL +        + W P+  Q   G+    GY+++ +   DG+G ++
Sbjct: 1136 TLQAPPDVAPANVTL-RTASETSLWLRWMPLLEQEYNGNPDSVGYRIR-YLRSDGQGRAV 1193

Query: 453  RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQS-LE 511
              +I ++ E   T ++     ++   +V AFN   +GP S ++   T E VP +  S + 
Sbjct: 1194 VHVIHDRVEREYT-IEDLEEWTEYRVQVQAFNAIGSGPWSHLVLGRTRESVPSSGPSNVS 1252

Query: 512  AIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKL 569
            A    SS   ++W  +     NG+++GYK+ ++     K      +       T+ SA+L
Sbjct: 1253 AQATSSSNMLVRWSDIPEADCNGLILGYKVMFKE----KDSEARAQFWLAEGNTSRSAQL 1308

Query: 570  AGLEPSTKYRIHLAGYTKAGDGAESK 595
             GL     Y I +  +T+ GDG  S+
Sbjct: 1309 TGLGKFMLYEIRVLAFTRIGDGVPSR 1334



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 129/310 (41%), Gaps = 49/310 (15%)

Query: 379  YTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVID--AKKAVVSWNP----VSPQ 429
            ++  AQT   + EA   L V         P +  L++  D  A+  ++SW P    +SP 
Sbjct: 1418 FSITAQTRKGWGEAAEALVVTTEKRDRPQPPSKPLVRQEDVRARSVLLSWEPGSDGLSP- 1476

Query: 430  SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
                  R Y VQT     GE ++    ++   +T   VD+  P +    RV A N   + 
Sbjct: 1477 -----VRFYTVQTRELPSGEWALHPASISH-NATAFVVDRLKPFTSYKFRVKATNDIGDS 1530

Query: 490  PPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQ 542
              SE    +T     PE  P     L   P  +++  ++W  P  ++ NG+L+G++++Y+
Sbjct: 1531 EYSEESESLTTLQAAPEEAPTI---LSVTPHTTTSVLIRWQPPSEDKINGILLGFRLRYR 1587

Query: 543  -----SVKGTKVGPL-------LERLPY-----ISDPTTTSAKLAGLEPSTKYRIHLAGY 585
                 S++G  +  +        E  P      +S+ + T  +L  L    +Y I ++ Y
Sbjct: 1588 ELLYDSLRGFTLHGIGNPGATWAELTPVYAVHNLSEVSLTQYELDNLSKHRRYEIRMSVY 1647

Query: 586  TKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI- 639
               G+G  S  + +F    +P   P NV  + +T   L ++W   P    N     Y+I 
Sbjct: 1648 NAVGEGPPSPPQEVFVGEAMPTGAPQNVAVKAATATQLDVTWEPPPTESQNGDIQGYKIH 1707

Query: 640  FWRRHNTGEA 649
            FW      E+
Sbjct: 1708 FWEAQRQNES 1717



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 77/351 (21%), Positives = 142/351 (40%), Gaps = 52/351 (14%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 1003 LTALTTYTIEVAAMTSKGQGQV----SSSTISSGVPPELPGAPTNLGISN---------- 1048

Query: 426  VSPQSLRGHFR-GY---------KVQTWTEKDGE----GSIRELIVNKGESTTTEVDKFV 471
            + P+S+   FR GY         +V+    ++GE    G + +L  N+ ++ + EV    
Sbjct: 1049 IGPRSVTLQFRPGYDGKTSISRWQVEAQVGQNGEAEEWGLVHQL-ANEPDARSLEVPNLN 1107

Query: 472  PASKNFARVLAFNGAYNGPPS----EIISFVTPEGV-PGTVQSLEAIPLGSSAFYLKWV- 525
            P +    R+   N     PPS     I +   P  V P  V    A     ++ +L+W+ 
Sbjct: 1108 PYTYYSFRMRQVNIVGTSPPSLPSRRIQTLQAPPDVAPANVTLRTA---SETSLWLRWMP 1164

Query: 526  ---KPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
               +    N   +GY+I+Y    G         +  I D       +  LE  T+YR+ +
Sbjct: 1165 LLEQEYNGNPDSVGYRIRYLRSDGQGRA----VVHVIHDRVEREYTIEDLEEWTEYRVQV 1220

Query: 583  AGYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKY 637
              +   G G  S  +       VP   P NV  + ++ +N+++ W+ +PE + N     Y
Sbjct: 1221 QAFNAIGSGPWSHLVLGRTRESVPSSGPSNVSAQATSSSNMLVRWSDIPEADCNGLILGY 1280

Query: 638  RIFWRRHNTGEAWNQDDVLDWRQSELV-LANQPTFQPYEIKVVQTWTEKDG 687
            ++ ++  ++ EA  Q  + +   S    L     F  YEI+V+      DG
Sbjct: 1281 KVMFKEKDS-EARAQFWLAEGNTSRSAQLTGLGKFMLYEIRVLAFTRIGDG 1330



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 12/171 (7%)

Query: 430  SLRG---HFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
            SLRG   H  G    TW E     ++  L  ++   T  E+D      +   R+  +N  
Sbjct: 1593 SLRGFTLHGIGNPGATWAELTPVYAVHNL--SEVSLTQYELDNLSKHRRYEIRMSVYNAV 1650

Query: 487  YNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQS 543
              GPPS        E +P G  Q++      ++   + W  P  E  NG + GYKI +  
Sbjct: 1651 GEGPPSPPQEVFVGEAMPTGAPQNVAVKAATATQLDVTWEPPPTESQNGDIQGYKIHFWE 1710

Query: 544  VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
             +       ++ L ++ +   T  KL  L   T Y + +A +  AGDG  S
Sbjct: 1711 AQRQNESARVKTL-FLPE---TGVKLKNLTGYTSYWVSIAAFNAAGDGPRS 1757


>gi|47224417|emb|CAG08667.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1301

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 203/733 (27%), Positives = 304/733 (41%), Gaps = 84/733 (11%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           +  LR   +E+ CI  G P P+  WSK    + P+ R S  +Y K+L I +V  SD G Y
Sbjct: 260 KTVLRGHVLEMECIAEGLPTPEISWSKVSGDL-PAKRTSFQHYQKTLRIVNVSESDAGEY 318

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECKASGLPEPEIHWVH 161
            C   N +G    ++I ++V AAPY+   P + +  A  E+    C+ASG P+P I W  
Sbjct: 319 RCLARNQLGSVH-HTILVTVKAAPYWLSGPSQNLVLAPGESGVLTCRASGTPKPSITWAM 377

Query: 162 NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           NG  I  AP +P RKV  + I   +++   +  Y CN +N  GY+  + +VNVL+  P +
Sbjct: 378 NGISIENAPADPSRKVEDDTIIFTDVQTGSSAVYQCNVSNDYGYLLSNAFVNVLSEPPRV 437

Query: 222 -TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVA 278
            T A K    +  +  ++ C  FG+P P++ W  + +   L G  Y I + G L++    
Sbjct: 438 LTPANKVYQVIKNQRALIDCASFGSPIPKITWFKDSRSSTLDGHPYIIHDNGTLEMHTAQ 497

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
             +SG+YTC ARN LG  +    L VKE T I  QPE   V  G+S  F C    DP+L 
Sbjct: 498 AHNSGKYTCVARNSLGIYENHVYLEVKEPTRILKQPEYKVVRRGRSVVFECKVKHDPTLI 557

Query: 339 LSIVWLR--GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            +I WL+  G  P D E   R +  +D SLT+T  +E D+G YTC   T LD   A A L
Sbjct: 558 PTITWLKDAGELPDDDE---RIILESD-SLTITDVTENDAGVYTCITNTTLDQDSASAEL 613

Query: 397 TV-------QVPLEAPSNFTLIQVIDAKKAVV--SWNPVSPQSLRGHFRGYKVQTWTEKD 447
           TV        V  E P   T +++ D KK  V  +W P    +     + + +Q      
Sbjct: 614 TVVEATPTPAVVYEQPDPPTDLELTDQKKRSVQLTWTPGDEHN--SPIQKFLIQFEDSLH 671

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNG-AYNGP--PSEIIS--FVTPEG 502
             G    L    G  TT  + K  P      RVLA N   ++ P  PS +       P+ 
Sbjct: 672 HRGHWHNLTEVPGTKTTAHL-KLSPYVHYTFRVLALNAVGFSRPSFPSRMFKTEAAAPDQ 730

Query: 503 VPGTVQSL--EAIPL-------GSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
            P  VQ    E   L       G++    + +   + NG  + YK+ ++         L 
Sbjct: 731 NPTGVQGFGTEHNNLVISWKRTGTNELLSQPLSGLEANGPGLHYKVMWRQKD------LD 784

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF-----YVPFKNPDNV 608
                ++    +   ++G      Y + +      G G E           +P   PDNV
Sbjct: 785 SEWTSVTVANNSKFIVSGTPTFVPYELKVQAVNDYGAGPEPDVALGFSGEDLPVAAPDNV 844

Query: 609 EGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQ 668
           +          + W  +P          +++++                WR+  L   N 
Sbjct: 845 QAMVLNSTVAEVHWDPVPSKLLRGHLKGFKVYY----------------WRERSLHRHN- 887

Query: 669 PTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 728
                             G  + + ++   G      +    P S     V  +NG   G
Sbjct: 888 ------------------GHHTEKHILNFSGNHIRGVLPGLHPFSLYLFNVRVYNGRGEG 929

Query: 729 PPSEIISFVTPEG 741
           PPS    F TPEG
Sbjct: 930 PPSTTQQFETPEG 942



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 100/198 (50%), Gaps = 10/198 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK-----DGEGSIRE 454
            +P+ AP N   + V+++  A V W+PV  + LRGH +G+KV  W E+     +G  + + 
Sbjct: 836  LPVAAPDNVQAM-VLNSTVAEVHWDPVPSKLLRGHLKGFKVYYWRERSLHRHNGHHTEKH 894

Query: 455  LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
            ++   G      +    P S     V  +NG   GPPS    F TPEGVPG   SL    
Sbjct: 895  ILNFSGNHIRGVLPGLHPFSLYLFNVRVYNGRGEGPPSTTQQFETPEGVPGAPTSLLVSS 954

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLE 573
            +   +  L+W  P   NG + GY +KYQ V  + ++GP +E L   ++   TS  L+ L+
Sbjct: 955  VNLDSLTLEWSPPHIHNGHITGYTLKYQPVNNSNELGP-VEELALAAN--ETSVTLSNLK 1011

Query: 574  PSTKYRIHLAGYTKAGDG 591
             ST+Y+ +L   T  G G
Sbjct: 1012 FSTRYKFYLNAKTVRGAG 1029



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 115/300 (38%), Gaps = 45/300 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPN--PRRKVGPNRITIENLRKSD-TGNYG 196
           E +   C+A G P P   W  NG        PN   R   G   + I  ++       Y 
Sbjct: 43  ENIIIHCEAKGKPHPSFSWTRNGTHFDIDKDPNVIMRPHSGTLVVDISRVKAEQYECVYQ 102

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEIT-EAPKDEYTVDGKTVVLTCR-VFGAPKPEVNWIH 254
           C A N  G    +  V   + +P  + E  K     +G ++VL CR   G P P + W+ 
Sbjct: 103 CTARNKHGTAVSNNIVVRQSRSPLWSKEKIKPMVVQEGVSLVLPCRPPAGLPPPIIFWMD 162

Query: 255 N--QKELTGGRYTILETGDLKITDVAFADS-GEYTCFARNKLG-TAQGSGSLTVKEHTH- 309
           N  Q+     R +    GDL  ++V   DS  +Y C+AR     T Q    +TVK  T  
Sbjct: 163 NNFQRLPQSSRVSQSLNGDLYFSNVLREDSRNDYICYARFPYTQTIQQKQPITVKVFTMD 222

Query: 310 ---------------ITDQPED-----YEVEAGQSAT----------FRCNAVSDPSLKL 339
                           ++ P +     + + +G S++            C A   P+ ++
Sbjct: 223 AINDTMAALYNDTDLFSEAPAEERKPSFLIPSGPSSSKTVLRGHVLEMECIAEGLPTPEI 282

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           S   + G  P    S     Q    +L +   SE D+G+Y C A+ +L  +     +TV+
Sbjct: 283 SWSKVSGDLPAKRTS----FQHYQKTLRIVNVSESDAGEYRCLARNQLGSVHHTILVTVK 338


>gi|355747487|gb|EHH51984.1| Protein sidekick-1, partial [Macaca fascicularis]
          Length = 2035

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 190/625 (30%), Positives = 273/625 (43%), Gaps = 44/625 (7%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
           + V   + +  L CI    P+      W ++GV      RI+ G  ++G+ L I +   +
Sbjct: 204 RSVVAGSSETTLECIASARPVEDLSVTWKRNGV------RITSGLHSFGRRLTISNPTSA 257

Query: 98  DQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPE 154
           D G Y CE +      E       L +   PYFT EPE  I+A  EETV   C+A G+P 
Sbjct: 258 DTGLYVCEAALLGSAFEPARAKAFLFITEPPYFTAEPESRISAEVEETVDIRCQAMGVPL 317

Query: 155 PEIHWVHNGKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P + W  +   IS+   NPR KV     + I+ LR  D+G + C A+N  G +    Y++
Sbjct: 318 PTLQWYKDAISISRLQ-NPRYKVLASGGLRIQKLRPEDSGIFQCFASNEGGEIQTHTYLD 376

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V   AP  T+ P D    DG T +L C V GAPKP + W      L  G     R+ +LE
Sbjct: 377 VTNIAPVFTQRPADTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLE 436

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L+I  V   D+G YTC+A N  G+   S +LTV   T I   PED+ V  G +AT  
Sbjct: 437 SGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNQTSIVHPPEDHVVIKGTTATLH 496

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A  DP + L  VW + +  +   S  R V   D SL ++++   D G YTC   +E  
Sbjct: 497 CGATHDPRVSLRYVWKKDNVALTPSSTSRIVVEKDGSLLISQTWSGDIGDYTCEIVSEGG 556

Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV-SWNPVSPQSLRGHFRGYKVQTWTEKD 447
                A L V     +P N           AVV SW  V P         Y V+  +E +
Sbjct: 557 NDSRMARLEVIELPHSPQNLLASPNSSHSHAVVLSW--VRPFDGNSPILYYIVEL-SENN 613

Query: 448 GEGSIRELIVNKG-ESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEG 502
               +   + N G E T   V    PA     RV A N    G Y+   S ++    P  
Sbjct: 614 SPWKVH--LSNVGPEMTGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPS 671

Query: 503 VPGTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560
            P   +++ A    + +  ++W  P +   NGVL GY ++Y+ + G   G   +R   I+
Sbjct: 672 APP--KNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYR-LAGLP-GEYQQR--NIT 725

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEGRGSTP 615
            P      +  L   T+Y I +A Y  AG G  S+      L  VP   P NV+      
Sbjct: 726 SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNS 785

Query: 616 NNLVISWTAMPEIEHNAPHFKYRIF 640
             +   W   P+   N  +  Y++ 
Sbjct: 786 TTIQFLWNPPPQQFINGINQGYKLL 810



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 179/668 (26%), Positives = 265/668 (39%), Gaps = 91/668 (13%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN-GVGEAK-SYSI 118
           P PQ  W ++G  I PS+RI+       L+I     SD G+Y  +  N   GE K S  I
Sbjct: 121 PRPQVTWFREGHKIIPSNRIAI-TLENQLVILATTASDAGAYYVQAVNEKNGENKTSPFI 179

Query: 119 DLSV--------LAAPYFTVEP--EFINAAEEETVTFECKASGLP--EPEIHWVHNGKPI 166
            LS+          AP   V P    + A   ET T EC AS  P  +  + W  NG  I
Sbjct: 180 HLSIARDIGTPETTAPTIVVPPGNRSVVAGSSET-TLECIASARPVEDLSVTWKRNGVRI 238

Query: 167 SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV---LAHAPEITE 223
           +    +  R     R+TI N   +DTG Y C A   LG  ++         +   P  T 
Sbjct: 239 TSGLHSFGR-----RLTISNPTSADTGLYVCEAA-LLGSAFEPARAKAFLFITEPPYFTA 292

Query: 224 APKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITDVAF 279
            P+   + +  +TV + C+  G P P + W  +      L   RY +L +G L+I  +  
Sbjct: 293 EPESRISAEVEETVDIRCQAMGVPLPTLQWYKDAISISRLQNPRYKVLASGGLRIQKLRP 352

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHI-TDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            DSG + CFA N+ G  Q    L V     + T +P D  V  G +A  RC     P  K
Sbjct: 353 EDSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRPADTTVTDGMTAILRCEVSGAP--K 410

Query: 339 LSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            +I W R +  +   S   PRF+      L +      D+G YTC A      + A ATL
Sbjct: 411 PAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATL 470

Query: 397 TV--QVPLEAPSNFTLIQVIDAKKAVVSWNPV-SPQ-SLRGHFRGYKV--------QTWT 444
           TV  Q  +  P    +  VI    A +       P+ SLR  ++   V        +   
Sbjct: 471 TVWNQTSIVHPPEDHV--VIKGTTATLHCGATHDPRVSLRYVWKKDNVALTPSSTSRIVV 528

Query: 445 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVP 504
           EKDG   I +         T E+   V    N +R+            E+I        P
Sbjct: 529 EKDGSLLISQTWSGDIGDYTCEI---VSEGGNDSRMARL---------EVIEL------P 570

Query: 505 GTVQSLEAIPLG--SSAFYLKWVKPEQPNGVLMGYKIKYQ------SVKGTKVGPLLERL 556
            + Q+L A P    S A  L WV+P   N  ++ Y ++         V  + VGP +   
Sbjct: 571 HSPQNLLASPNSSHSHAVVLSWVRPFDGNSPILYYIVELSENNSPWKVHLSNVGPEM--- 627

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG---AESKYLFY---VPFKNPDNVEG 610
                   T   ++GL P+  Y+  +    + G G   AE+  L      P   P N+  
Sbjct: 628 --------TGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVA 679

Query: 611 RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT 670
            G T  ++++ W   PE EHN     Y + +R       + Q ++     +  ++ +   
Sbjct: 680 SGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNITSPEVNYCLVTDLII 739

Query: 671 FQPYEIKV 678
           +  YEI+V
Sbjct: 740 WTQYEIQV 747



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 101/240 (42%), Gaps = 23/240 (9%)

Query: 389 FIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
           F  A    T+Q VP   P N    + +++      WNP   Q + G  +GYK+  W    
Sbjct: 758 FSRAVTEYTLQGVPTAPPQNVQ-TEAVNSTTIQFLWNPPPQQFINGINQGYKLLAWPADA 816

Query: 448 GEGSIRELI------VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
            E      I      V+ G    T + KF   +  F  VL F    +GPPS      T E
Sbjct: 817 PEAVTVVTIAPDFHGVHHGH--ITNLKKF---TAYFTSVLCFTTPGDGPPSTPQLVWTHE 871

Query: 502 GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
             PG V  L    +  ++  + W +P + NG++ GY+I ++ V G        RL +  +
Sbjct: 872 DKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQISWE-VYGRNDS----RLTHTLN 926

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVIS 621
            TT   K+ GL   T Y I +A  T  G G  +     +    P ++ G    P+NLVIS
Sbjct: 927 STTHEYKIQGLSSLTTYTIDVAAVTAVGAGLVTSST--ISSGVPPDLPG---APSNLVIS 981



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 87/375 (23%), Positives = 138/375 (36%), Gaps = 32/375 (8%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           ++ L   ++ L C+  G+   +  W +DG  +      S+  Y    II  ++  D G Y
Sbjct: 16  QIHLEGNRLVLTCLAEGSWPLEFKWMRDGRELTTYS--SEYKY----IIPSLQKLDAGFY 69

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFE-CKASGLPEPEIHWVH 161
            C V N +G       ++ V     FT   +     +           +  P P++ W  
Sbjct: 70  RCVVRNRMGALLQRKSEVQVAYMGSFTDMDQRKTVPQGRAAILNLLPITSYPRPQVTWFR 129

Query: 162 NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLG-------YVYKDVYVNV 214
            G  I   P N       N++ I     SD G Y   A N          +++  +  ++
Sbjct: 130 EGHKI--IPSNRIAITLENQLVILATTASDAGAYYVQAVNEKNGENKTSPFIHLSIARDI 187

Query: 215 ---LAHAPEITEAPKDEYTVDGKT-VVLTCRVFGAPKPE--VNWIHNQKELTGGRYTILE 268
                 AP I   P +   V G +   L C     P  +  V W  N   +T G ++   
Sbjct: 188 GTPETTAPTIVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGVRITSGLHSFGR 247

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGT----AQGSGSLTVKEHTHITDQPED-YEVEAGQ 323
              L I++   AD+G Y C A   LG+    A+    L + E  + T +PE     E  +
Sbjct: 248 --RLTISNPTSADTGLYVCEA-ALLGSAFEPARAKAFLFITEPPYFTAEPESRISAEVEE 304

Query: 324 SATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +   RC A+  P   L   W + +  I     PR+       L + K    DSG + C A
Sbjct: 305 TVDIRCQAMGVPLPTLQ--WYKDAISISRLQNPRYKVLASGGLRIQKLRPEDSGIFQCFA 362

Query: 384 QTELDFIEAQATLTV 398
             E   I+    L V
Sbjct: 363 SNEGGEIQTHTYLDV 377



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 103/275 (37%), Gaps = 29/275 (10%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           APYF  EP       E   +   C A G    E  W+ +G+ ++             +  
Sbjct: 5   APYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMRDGRELTTYSSE-------YKYI 57

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR-V 242
           I +L+K D G Y C   N +G + +      +A+    T+  + +    G+  +L    +
Sbjct: 58  IPSLQKLDAGFYRCVVRNRMGALLQRKSEVQVAYMGSFTDMDQRKTVPQGRAAILNLLPI 117

Query: 243 FGAPKPEVNWIH-NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNK--------- 292
              P+P+V W     K +   R  I     L I     +D+G Y   A N+         
Sbjct: 118 TSYPRPQVTWFREGHKIIPSNRIAITLENQLVILATTASDAGAYYVQAVNEKNGENKTSP 177

Query: 293 ---LGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSE 348
              L  A+  G+      T I   P +  V AG S  T  C A + P   LS+ W R   
Sbjct: 178 FIHLSIARDIGTPETTAPT-IVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGV 236

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            I        + S    LT++  +  D+G Y C A
Sbjct: 237 RIT-----SGLHSFGRRLTISNPTSADTGLYVCEA 266



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 2/142 (1%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP N   +  + A +  V+W+P  P+S  G+ +GYK+  W E D +    ++ V   
Sbjct: 1603 PAMAPQNVQ-VTPLTASQLEVTWDPPPPESQNGNIQGYKIYYW-EADSQNDTEKMKVLFL 1660

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
                  +      ++    + AFN A +GP S+     T +  PG    L    + S+  
Sbjct: 1661 PEPVVRLKNLTSHTEYLVSISAFNAAGDGPRSDPRQGRTHQAAPGAPSFLAFSEITSTTL 1720

Query: 521  YLKWVKPEQPNGVLMGYKIKYQ 542
             + W +P   NG+L GY++ Y+
Sbjct: 1721 NVSWGEPAAANGILQGYRVVYE 1742



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 10/207 (4%)

Query: 397  TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIRE 454
            T+Q P +       ++        + W P+      G+    GY+++ W       ++ +
Sbjct: 1070 TLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRSDLQSSALAQ 1129

Query: 455  LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEAI 513
            ++ ++ E   T +++     +   ++ AFN    GP SE++   T E VP    +++ A 
Sbjct: 1130 VVSDRLEREFT-IEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRESVPSAAPENVSAE 1188

Query: 514  PLGSSAFYLKWVK-PEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAG 571
             + S+   L W   PEQ  NG+++GYKI +++ K     P   R   +    T SA LAG
Sbjct: 1189 AVSSTQILLTWASVPEQDQNGLILGYKILFRA-KDLDPEP---RSHTVRGNYTQSALLAG 1244

Query: 572  LEPSTKYRIHLAGYTKAGDGAESKYLF 598
            L     Y + +  +T+ G+G  S  L 
Sbjct: 1245 LRKFVLYELQVLAFTRIGNGVPSMPLI 1271



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 94/229 (41%), Gaps = 30/229 (13%)

Query: 391  EAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV--QTWTEKD 447
            E +A  T+Q VP E P + +      +   ++ W P   +SL G  +GY++  +    + 
Sbjct: 1469 ETEAVTTLQDVPGEPPGSVSATPHTTSS-VLIQWQPPRDESLNGLLQGYRIYYRELEYEA 1527

Query: 448  GEG----SIRELIVNKGESTTTEVDKFVPAS-----------KNFARVLAFNGAYN---- 488
            G G    +++  I  + E T     K V +S           K + R      AYN    
Sbjct: 1528 GSGTEAKTLKSPIALRAELTAQSSFKTVNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGE 1587

Query: 489  GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
             P S  +     E  P    Q+++  PL +S   + W    PE  NG + GYKI Y    
Sbjct: 1588 SPASAPVEVFVGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEAD 1647

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
                   ++ L ++ +P     +L  L   T+Y + ++ +  AGDG  S
Sbjct: 1648 SQNDTEKMKVL-FLPEPV---VRLKNLTSHTEYLVSISAFNAAGDGPRS 1692



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 11/148 (7%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V  Q   G   GYK+  +  KD +   R   V +
Sbjct: 1177 VPSAAPENVS-AEAVSSTQILLTWASVPEQDQNGLILGYKI-LFRAKDLDPEPRSHTV-R 1233

Query: 460  GESTTTEV----DKFVPASKNFARVLAFNGAYNGPPSE-IISFVTPEGVPGTVQSLEAIP 514
            G  T + +     KFV       +VLAF    NG PS  +I   T +  PG    L    
Sbjct: 1234 GNYTQSALLAGLRKFVLYE---LQVLAFTRIGNGVPSMPLILERTKDDAPGPPVRLVFPE 1290

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
            +  ++  + W  PE+PNG+++GY+I Y+
Sbjct: 1291 VRLTSVRIVWQPPEEPNGIILGYQIAYR 1318



 Score = 43.5 bits (101), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 109/280 (38%), Gaps = 51/280 (18%)

Query: 436  RGYKVQTWTEKDGEGSIRELIVN-----KGE-----------STTTEVDKFVPASKNFAR 479
            R  ++Q     DG   IR   V      +GE           +T   VD+  P +    R
Sbjct: 1395 RSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSIRHAATACIVDRLRPFTSYKLR 1454

Query: 480  VLAFNGAYNGP-PSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKP--EQPNGVLM 535
            + A N   +    SE  +  T + VPG    S+ A P  +S+  ++W  P  E  NG+L 
Sbjct: 1455 LKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTSSVLIQWQPPRDESLNGLLQ 1514

Query: 536  GYKIKYQSVK-----GTKV----GPLLERLPYI---------SDPTTTSAKLAGLEPSTK 577
            GY+I Y+ ++     GT+      P+  R             S  T+T  +L  L+   +
Sbjct: 1515 GYRIYYRELEYEAGSGTEAKTLKSPIALRAELTAQSSFKTVNSSSTSTMCELTHLKKYRR 1574

Query: 578  YRIHLAGYTKAGDG-AESKYLFYV----PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNA 632
            Y + +  Y   G+  A +    +V    P   P NV+    T + L ++W   P    N 
Sbjct: 1575 YEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNG 1634

Query: 633  PHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
                Y+I++        W  D   D  + +++   +P  +
Sbjct: 1635 NIQGYKIYY--------WEADSQNDTEKMKVLFLPEPVVR 1666



 Score = 42.4 bits (98), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 65/166 (39%), Gaps = 8/166 (4%)

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
           TE    +  ++G  +VLTC   G+   E  W+ + +ELT    T        I  +   D
Sbjct: 10  TEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMRDGRELT----TYSSEYKYIIPSLQKLD 65

Query: 282 SGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           +G Y C  RN++G   Q    + V      TD  +   V  G++A      ++    +  
Sbjct: 66  AGFYRCVVRNRMGALLQRKSEVQVAYMGSFTDMDQRKTVPQGRAAILNLLPITS-YPRPQ 124

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + W R    I   +       N   +  T +S  D+G Y  +A  E
Sbjct: 125 VTWFREGHKIIPSNRIAITLENQLVILATTAS--DAGAYYVQAVNE 168


>gi|90183174|sp|Q8AV57.2|SDK2_CHICK RecName: Full=Protein sidekick-2; Flags: Precursor
          Length = 2177

 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 178/603 (29%), Positives = 266/603 (44%), Gaps = 32/603 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           R   V     +V + C+    PL +   IW KDGVPI  S  IS  +Y + L I +    
Sbjct: 227 RNTSVVAGTSEVTMECVANARPLIKLHIIWKKDGVPI--SSGIS--DYSRRLTILNPTLG 282

Query: 98  DQGSYTCE--VSNGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPE 154
           D G Y CE  + +    A +    LSVL  P F  EPE  I A  E+ V   C+A G+P 
Sbjct: 283 DSGYYECEAVLRSSSVPAVAEGAYLSVLEPPQFVKEPERHITAEMEKVVAIPCQAKGVPP 342

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
           P++ W  +   I     +  + +    + I  L   DTG + C A N+ G V    Y+ V
Sbjct: 343 PDMAWYKDASLIHPEQLSRFQLLADGSLQISGLLPDDTGMFQCFARNAAGEVQTTTYLAV 402

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILET 269
            + AP IT  P+D   +DG +V+L C   GAP+P + W   ++ L  G     R+T+LE+
Sbjct: 403 TSIAPNITRGPQDSTVIDGMSVILNCETSGAPRPAITWQKGERILASGSVQLPRFTLLES 462

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L ++     D+G YTC A N  G  + S  L V   T ITD P+D  V  G  A+  C
Sbjct: 463 GSLLVSPAHLTDAGTYTCLATNSRGVDEASADLVVWARTRITDPPQDQSVIKGTKASMSC 522

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
               DPS+ +  +W +   P+  ES PR       +L ++++   D G YTC+  +    
Sbjct: 523 GVTHDPSVDVRYIWEKDGAPLGTESGPRLRLDETGTLHISQTWSGDIGTYTCKVLSAGGN 582

Query: 390 IEAQATLTV-QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
               A L V Q+P    S   ++  ++ +   ++W    P         Y V+  +E + 
Sbjct: 583 DSRSAHLRVRQLPHAPESPVAVLSPLEKRAINLTW--AKPFDGNSPLLRYLVEI-SENNA 639

Query: 449 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT-PEGVP-GT 506
             ++    V+  E T   V   VPA     R+ A N       S+    V+ PE  P   
Sbjct: 640 PWTVLLASVDP-ELTWVVVRGLVPARSYQFRLCAVNDVGRSQFSKDTERVSLPEEPPFAP 698

Query: 507 VQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT 564
            Q++ A    + +  ++W  P +   NGVL GY I+Y  + G  VG    +   I++   
Sbjct: 699 PQNVIASGRTNQSIMIQWQPPPESHQNGVLKGYIIRY-CLAGLPVG---YQFKNITNADV 754

Query: 565 TSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLV 619
            +  L  L   T Y I +A Y  AG G  S       L  VP   P NV+   +    + 
Sbjct: 755 NNLLLEDLIIWTNYEIEVAAYNSAGLGVYSMKVTEWTLQGVPTVPPGNVQTEATNSTTIR 814

Query: 620 ISW 622
            +W
Sbjct: 815 FTW 817



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 182/680 (26%), Positives = 270/680 (39%), Gaps = 69/680 (10%)

Query: 35  QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV 94
           QQ V+  +   +R  ++  F      P PQ  W +DG  I+PS RI+      +L+I   
Sbjct: 126 QQSVSHGEAAVIRAPRIASF------PQPQVTWFRDGRKISPSSRIAI-TLENTLVILST 178

Query: 95  EFSDQGSYTCE-VSNGVGEAK-SYSIDLSVL--------AAPYFTVEPEFIN-AAEEETV 143
              D G Y  + V++  G+ K S  I L+V          AP   V P   +  A    V
Sbjct: 179 VAPDAGRYYVQAVNDKNGDNKTSQPITLTVANVGGPADPIAPTIIVPPRNTSVVAGTSEV 238

Query: 144 TFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA-- 199
           T EC A+  P  ++H  W  +G PIS    +  R     R+TI N    D+G Y C A  
Sbjct: 239 TMECVANARPLIKLHIIWKKDGVPISSGISDYSR-----RLTILNPTLGDSGYYECEAVL 293

Query: 200 -TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDG-KTVVLTCRVFGAPKPEVNW----- 252
            ++S+  V +  Y++VL   P+  + P+   T +  K V + C+  G P P++ W     
Sbjct: 294 RSSSVPAVAEGAYLSVL-EPPQFVKEPERHITAEMEKVVAIPCQAKGVPPPDMAWYKDAS 352

Query: 253 -IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHI 310
            IH ++     R+ +L  G L+I+ +   D+G + CFARN  G  Q +  L V     +I
Sbjct: 353 LIHPEQL---SRFQLLADGSLQISGLLPDDTGMFQCFARNAAGEVQTTTYLAVTSIAPNI 409

Query: 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTV 368
           T  P+D  V  G S    C     P  + +I W +G   +   S   PRF      SL V
Sbjct: 410 TRGPQDSTVIDGMSVILNCETSGAP--RPAITWQKGERILASGSVQLPRFTLLESGSLLV 467

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
           + +   D+G YTC A       EA A L V              VI   KA +S      
Sbjct: 468 SPAHLTDAGTYTCLATNSRGVDEASADLVVWARTRITDPPQDQSVIKGTKASMSCGVT-- 525

Query: 429 QSLRGHFRGYKVQTWTEKDGE--GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
                H     V+   EKDG   G+     +   E+ T  + +              +  
Sbjct: 526 -----HDPSVDVRYIWEKDGAPLGTESGPRLRLDETGTLHISQTWSGDIGTYTCKVLSAG 580

Query: 487 YNGPPSEIISFVTPEGVPGTVQSLEAI--PLGSSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
            N   S  +       +P   +S  A+  PL   A  L W KP   N  L+ Y ++  S 
Sbjct: 581 GNDSRSAHLRV---RQLPHAPESPVAVLSPLEKRAINLTWAKPFDGNSPLLRYLVEI-SE 636

Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
                  LL  +    DP  T   + GL P+  Y+  L      G    SK    V    
Sbjct: 637 NNAPWTVLLASV----DPELTWVVVRGLVPARSYQFRLCAVNDVGRSQFSKDTERVSLPE 692

Query: 601 --PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDW 658
             PF  P NV   G T  +++I W   PE   N     Y I +        +   ++ + 
Sbjct: 693 EPPFAPPQNVIASGRTNQSIMIQWQPPPESHQNGVLKGYIIRYCLAGLPVGYQFKNITNA 752

Query: 659 RQSELVLANQPTFQPYEIKV 678
             + L+L +   +  YEI+V
Sbjct: 753 DVNNLLLEDLIIWTNYEIEV 772



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 138/587 (23%), Positives = 229/587 (39%), Gaps = 68/587 (11%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEV 106
           V L C   G P P   W K G  I  S  +    +      SL++     +D G+YTC  
Sbjct: 424 VILNCETSGAPRPAITWQK-GERILASGSVQLPRFTLLESGSLLVSPAHLTDAGTYTCLA 482

Query: 107 SN--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--WVHN 162
           +N  GV EA   S DL V A    T  P+  +  +    +  C  +  P  ++   W  +
Sbjct: 483 TNSRGVDEA---SADLVVWARTRITDPPQDQSVIKGTKASMSCGVTHDPSVDVRYIWEKD 539

Query: 163 GKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAP 219
           G P+      PR ++     + I      D G Y C   ++ G   +  ++ V  L HAP
Sbjct: 540 GAPLGTES-GPRLRLDETGTLHISQTWSGDIGTYTCKVLSAGGNDSRSAHLRVRQLPHAP 598

Query: 220 EITEAPKDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVA 278
           E   A      ++ + + LT  + F    P + ++    E       +L + D ++T V 
Sbjct: 599 ESPVAVLSP--LEKRAINLTWAKPFDGNSPLLRYLVEISENNAPWTVLLASVDPELTWVV 656

Query: 279 F-----ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS--ATFRCN- 330
                 A S ++   A N +G +Q S      + T     PE+      Q+  A+ R N 
Sbjct: 657 VRGLVPARSYQFRLCAVNDVGRSQFS------KDTERVSLPEEPPFAPPQNVIASGRTNQ 710

Query: 331 -----------AVSDPSLKLSIV-WLRGSEPIDFESEPRFVQSNDYS------LTVTKSS 372
                      +  +  LK  I+ +     P+ ++   + + + D +      L +  + 
Sbjct: 711 SIMIQWQPPPESHQNGVLKGYIIRYCLAGLPVGYQF--KNITNADVNNLLLEDLIIWTNY 768

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           E++   Y             + TL   VP   P N    +  ++     +WNP SPQ + 
Sbjct: 769 EIEVAAYNSAGLGVYSMKVTEWTLQ-GVPTVPPGNVQ-TEATNSTTIRFTWNPPSPQFIN 826

Query: 433 GHFRGYKVQTWT-EKDGEGSIRELIVNKGEST----TTEVDKFVPASKNFARVLAFNGAY 487
           G  +GYK+  W  E + E ++  +  N  +S        + KF   ++    VL F    
Sbjct: 827 GINQGYKLIAWEPEHEEEATVVTVRPNFQDSVHVGYVVGLKKF---TEYLTSVLCFTTPG 883

Query: 488 NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
           +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY+I ++    T
Sbjct: 884 DGPRSPPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPLEKNGILTGYRISWEEYNRT 943

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
                  R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 944 NT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 985



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 115/298 (38%), Gaps = 31/298 (10%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           +PYF  EP       E   +   C A G    E  W+HN + +++            R  
Sbjct: 30  SPYFKTEPVRSQVHLEGNRLVLTCMAEGSWPLEFKWLHNSRELTKFSLE-------YRYM 82

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RV 242
           I +L ++  G Y C   N +G + +      +A+     ++   +    G+  V+   R+
Sbjct: 83  ITSLDRTHAGFYRCIVRNRMGALLQRQTEVQVAYMGSFEDSETQQSVSHGEAAVIRAPRI 142

Query: 243 FGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSG 300
              P+P+V W  + ++++   R  I     L I      D+G Y   A N K G  + S 
Sbjct: 143 ASFPQPQVTWFRDGRKISPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQ 202

Query: 301 SLTVKEHT----------HITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEP 349
            +T+               I   P +  V AG S  T  C A + P +KL I+W +   P
Sbjct: 203 PITLTVANVGGPADPIAPTIIVPPRNTSVVAGTSEVTMECVANARPLIKLHIIWKKDGVP 262

Query: 350 IDFESEPRFVQSNDYS--LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAP 405
           I           +DYS  LT+   +  DSG Y C A      + A A       LE P
Sbjct: 263 IS-------SGISDYSRRLTILNPTLGDSGYYECEAVLRSSSVPAVAEGAYLSVLEPP 313



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P  AP N   ++   A +  V+W P   +S  G  +GYK+  W  +    S R   +  
Sbjct: 1627 MPTGAPQNVA-VKAATATQLDVTWEPPPTESQNGDIQGYKIHFWEAQRQNESARVKTLFL 1685

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E T  ++      +  +  + AFN A +GP S  ++  T +  P    S+    L +++
Sbjct: 1686 PE-TGVKLKNLTGYTSYWVSIAAFNAAGDGPRSTPVTARTQQAAPSAPGSIRFSELTTTS 1744

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P  PNG+L GY++ Y+
Sbjct: 1745 VNVSWEPPPLPNGILEGYRLVYE 1767



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 83/199 (41%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   PSN +  Q   +   +V W+ +      G   GYKV  + EKD E   +  +   
Sbjct: 1203 VPSSGPSNVS-AQATSSSNMLVRWSDIPEADCNGLILGYKVM-FKEKDSEARAQFWLAEG 1260

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           RVLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1261 NTSRSAQLTGLGKFMLYEIRVLAFTRIGDGVPSRPPILERTLDDVPGPPVGMLFPEVRTT 1320

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y++ ++    T    + E L     P+T      GL+P   Y
Sbjct: 1321 SVRLIWQPPTAPNGIILAYQLTHRLNTTTANAAVSEVL----GPSTRQYTATGLQPEATY 1376

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1377 LFSITAQTRKGWGEAAEAL 1395



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 14/206 (6%)

Query: 397  TVQVPLE-APSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGEG-SI 452
            T+Q P + AP+N TL +        + W P+  Q   G+    GY+++ +   DG+G ++
Sbjct: 1096 TLQAPPDVAPANVTL-RTASETSLWLRWMPLLEQEYNGNPDSVGYRIR-YLRSDGQGRAV 1153

Query: 453  RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQS-LE 511
              +I ++ E   T ++     ++   +V AFN   +GP S ++   T E VP +  S + 
Sbjct: 1154 VHVIHDRVEREYT-IEDLEEWTEYRVQVQAFNAIGSGPWSHLVLGRTRESVPSSGPSNVS 1212

Query: 512  AIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKL 569
            A    SS   ++W  +     NG+++GYK+ ++     K      +       T+ SA+L
Sbjct: 1213 AQATSSSNMLVRWSDIPEADCNGLILGYKVMFKE----KDSEARAQFWLAEGNTSRSAQL 1268

Query: 570  AGLEPSTKYRIHLAGYTKAGDGAESK 595
             GL     Y I +  +T+ GDG  S+
Sbjct: 1269 TGLGKFMLYEIRVLAFTRIGDGVPSR 1294



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 129/310 (41%), Gaps = 49/310 (15%)

Query: 379  YTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVID--AKKAVVSWNP----VSPQ 429
            ++  AQT   + EA   L V         P +  L++  D  A+  ++SW P    +SP 
Sbjct: 1378 FSITAQTRKGWGEAAEALVVTTEKRDRPQPPSKPLVRQEDVRARSVLLSWEPGSDGLSP- 1436

Query: 430  SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
                  R Y VQT     GE ++    ++   +T   VD+  P +    RV A N   + 
Sbjct: 1437 -----VRFYTVQTRELPSGEWALHPASISH-NATAFVVDRLKPFTSYKFRVKATNDIGDS 1490

Query: 490  PPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQ 542
              SE    +T     PE  P     L   P  +++  ++W  P  ++ NG+L+G++++Y+
Sbjct: 1491 EYSEESESLTTLQAAPEEAPTI---LSVTPHTTTSVLIRWQPPSEDKINGILLGFRLRYR 1547

Query: 543  -----SVKGTKVGPL-------LERLPY-----ISDPTTTSAKLAGLEPSTKYRIHLAGY 585
                 S++G  +  +        E  P      +S+ + T  +L  L    +Y I ++ Y
Sbjct: 1548 ELLYDSLRGFTLHGIGNPGATWAELTPVYAVHNLSEVSLTQYELDNLSKHRRYEIRMSVY 1607

Query: 586  TKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI- 639
               G+G  S  + +F    +P   P NV  + +T   L ++W   P    N     Y+I 
Sbjct: 1608 NAVGEGPPSPPQEVFVGEAMPTGAPQNVAVKAATATQLDVTWEPPPTESQNGDIQGYKIH 1667

Query: 640  FWRRHNTGEA 649
            FW      E+
Sbjct: 1668 FWEAQRQNES 1677



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 77/351 (21%), Positives = 142/351 (40%), Gaps = 52/351 (14%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 963  LTALTTYTIEVAAMTSKGQGQV----SSSTISSGVPPELPGAPTNLGISN---------- 1008

Query: 426  VSPQSLRGHFR-GY---------KVQTWTEKDGE----GSIRELIVNKGESTTTEVDKFV 471
            + P+S+   FR GY         +V+    ++GE    G + +L  N+ ++ + EV    
Sbjct: 1009 IGPRSVTLQFRPGYDGKTSISRWQVEAQVGQNGEAEEWGLVHQL-ANEPDARSLEVPNLN 1067

Query: 472  PASKNFARVLAFNGAYNGPPS----EIISFVTPEGV-PGTVQSLEAIPLGSSAFYLKWV- 525
            P +    R+   N     PPS     I +   P  V P  V    A     ++ +L+W+ 
Sbjct: 1068 PYTYYSFRMRQVNIVGTSPPSLPSRRIQTLQAPPDVAPANVTLRTA---SETSLWLRWMP 1124

Query: 526  ---KPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
               +    N   +GY+I+Y    G         +  I D       +  LE  T+YR+ +
Sbjct: 1125 LLEQEYNGNPDSVGYRIRYLRSDGQGRA----VVHVIHDRVEREYTIEDLEEWTEYRVQV 1180

Query: 583  AGYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKY 637
              +   G G  S  +       VP   P NV  + ++ +N+++ W+ +PE + N     Y
Sbjct: 1181 QAFNAIGSGPWSHLVLGRTRESVPSSGPSNVSAQATSSSNMLVRWSDIPEADCNGLILGY 1240

Query: 638  RIFWRRHNTGEAWNQDDVLDWRQSELV-LANQPTFQPYEIKVVQTWTEKDG 687
            ++ ++  ++ EA  Q  + +   S    L     F  YEI+V+      DG
Sbjct: 1241 KVMFKEKDS-EARAQFWLAEGNTSRSAQLTGLGKFMLYEIRVLAFTRIGDG 1290



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 12/171 (7%)

Query: 430  SLRG---HFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
            SLRG   H  G    TW E     ++  L  ++   T  E+D      +   R+  +N  
Sbjct: 1553 SLRGFTLHGIGNPGATWAELTPVYAVHNL--SEVSLTQYELDNLSKHRRYEIRMSVYNAV 1610

Query: 487  YNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQS 543
              GPPS        E +P G  Q++      ++   + W  P  E  NG + GYKI +  
Sbjct: 1611 GEGPPSPPQEVFVGEAMPTGAPQNVAVKAATATQLDVTWEPPPTESQNGDIQGYKIHFWE 1670

Query: 544  VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
             +       ++ L ++ +   T  KL  L   T Y + +A +  AGDG  S
Sbjct: 1671 AQRQNESARVKTL-FLPE---TGVKLKNLTGYTSYWVSIAAFNAAGDGPRS 1717


>gi|296192587|ref|XP_002744137.1| PREDICTED: protein sidekick-1 [Callithrix jacchus]
          Length = 2093

 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 188/624 (30%), Positives = 274/624 (43%), Gaps = 42/624 (6%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
           + V   + +  L CI    P+ +    W ++GV      RI+ G  N+G+ L I +   +
Sbjct: 228 RSVVAGSSETTLECIASARPVEELSVTWKRNGV------RITSGLHNFGRRLTISNPTSA 281

Query: 98  DQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPE 154
           D G Y CE +      E       L ++  PYFT EPE  I+   EETV   C+A G+P 
Sbjct: 282 DTGLYVCEAALRGSAFEPARAKAFLFIIEPPYFTAEPESRISGEVEETVDIGCRAMGVPL 341

Query: 155 PEIHWVHNGKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P + W  +   IS+   NPR KV     + I+ L   D+G + C A+N  G +    Y++
Sbjct: 342 PTLQWYKDAVSISKLQ-NPRYKVLASGGLRIQKLHPEDSGIFQCFASNEGGEIQTHTYLD 400

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V   AP  T+ P D    DG T +L C V GAPKP + W      L  G     R+ +LE
Sbjct: 401 VTNIAPVFTQQPADTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLE 460

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L+IT V   D+G YTC+A N  G+   S  LTV   T I   PED+ V  G +AT R
Sbjct: 461 SGGLQITPVFIQDAGNYTCYAANTEGSLNASAMLTVWNRTSIVHPPEDHVVIKGTTATLR 520

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A+ DP + L  VW + +  +   S  R +   D SL ++++   D G YTC   +E  
Sbjct: 521 CGAMHDPRVSLRYVWKKDNVVLTPSSTSRIMVEKDGSLLISQTWSGDIGDYTCDIVSEGG 580

Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV-VSWNPVSPQSLRGHFRGYKVQTWTEKD 447
                A L V     +P N           AV +SW  V P         Y V+  +E +
Sbjct: 581 NDSRMARLEVIELPHSPQNLLASPNSSHSHAVALSW--VRPFDGNSPILYYIVEL-SENN 637

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGV 503
               +    V+  E T   V    PA     RV A N    G Y+   S ++    P   
Sbjct: 638 SPWKVHLSNVDP-EMTGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSA 696

Query: 504 PGTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
           P   +++ A    + +  ++W  P +   NGVL GY ++Y+ + G   G   +R   I+ 
Sbjct: 697 PP--KNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYR-LAGLP-GEYQQR--NITS 750

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEGRGSTPN 616
           P      +  L   T+Y I +A Y  AG G  S+      L  VP   P NV+       
Sbjct: 751 PEVNYCLVMDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNST 810

Query: 617 NLVISWTAMPEIEHNAPHFKYRIF 640
            +   W   P+   N  +  Y++ 
Sbjct: 811 TIQFLWNPPPQQFINGINQGYKLL 834



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 179/662 (27%), Positives = 265/662 (40%), Gaps = 79/662 (11%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN-GVGEAK-SYSI 118
           P PQ  W ++G  I PS+RI+       L+I     SD G+Y  +  N   GE K S  I
Sbjct: 145 PRPQVTWFREGHKIIPSNRIAI-TLENQLVILATTPSDTGAYYVQAVNEKNGENKTSPFI 203

Query: 119 DLSV--------LAAPYFTVEP--EFINAAEEETVTFECKASGLP--EPEIHWVHNGKPI 166
            LS+          AP   V P    + A   ET T EC AS  P  E  + W  NG  I
Sbjct: 204 HLSIARDIGTPETMAPTIVVPPGNRSVVAGSSET-TLECIASARPVEELSVTWKRNGVRI 262

Query: 167 SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV---LAHAPEITE 223
           +    N  R     R+TI N   +DTG Y C A    G  ++         +   P  T 
Sbjct: 263 TSGLHNFGR-----RLTISNPTSADTGLYVCEAALR-GSAFEPARAKAFLFIIEPPYFTA 316

Query: 224 APKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITDVAF 279
            P+   + +  +TV + CR  G P P + W  +     +L   RY +L +G L+I  +  
Sbjct: 317 EPESRISGEVEETVDIGCRAMGVPLPTLQWYKDAVSISKLQNPRYKVLASGGLRIQKLHP 376

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHI-TDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            DSG + CFA N+ G  Q    L V     + T QP D  V  G +A  RC     P  K
Sbjct: 377 EDSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQQPADTTVTDGMTAILRCEVSGAP--K 434

Query: 339 LSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            +I W R +  +   S   PRF+      L +T     D+G YTC A      + A A L
Sbjct: 435 PAITWKRENHILASGSVRIPRFMLLESGGLQITPVFIQDAGNYTCYAANTEGSLNASAML 494

Query: 397 TV---QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQ-SLRGHFRGYKV--------QTWT 444
           TV      +  P +  +I+   A     + +   P+ SLR  ++   V        +   
Sbjct: 495 TVWNRTSIVHPPEDHVVIKGTTATLRCGAMH--DPRVSLRYVWKKDNVVLTPSSTSRIMV 552

Query: 445 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVP 504
           EKDG   I +         T ++   V    N +R+            E+I        P
Sbjct: 553 EKDGSLLISQTWSGDIGDYTCDI---VSEGGNDSRMARL---------EVIEL------P 594

Query: 505 GTVQSLEAIPLG--SSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
            + Q+L A P    S A  L WV+P   N  ++ Y ++          P    L  + DP
Sbjct: 595 HSPQNLLASPNSSHSHAVALSWVRPFDGNSPILYYIVELSE----NNSPWKVHLSNV-DP 649

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDG---AESKYLFY---VPFKNPDNVEGRGSTPN 616
             T   ++GL P+  Y+  +    + G G   AE+  L      P   P N+   G T  
Sbjct: 650 EMTGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQ 709

Query: 617 NLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEI 676
           ++++ W   PE EHN     Y + +R       + Q ++     +  ++ +   +  YEI
Sbjct: 710 SIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNITSPEVNYCLVMDLIIWTQYEI 769

Query: 677 KV 678
           +V
Sbjct: 770 QV 771



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 101/240 (42%), Gaps = 23/240 (9%)

Query: 389  FIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
            F  A    T+Q VP   P N    + +++      WNP   Q + G  +GYK+  W    
Sbjct: 782  FSRAVTEYTLQGVPTAPPQNVQ-TEAVNSTTIQFLWNPPPQQFINGINQGYKLLAWPADA 840

Query: 448  GEGSIRELI------VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
             E      I      V+ G    T + KF   +  F  VL F    +GPPS      T E
Sbjct: 841  PEAVTVITIAPDFHGVHHGH--ITNLRKF---TAYFTSVLCFTTPGDGPPSTPQLVWTHE 895

Query: 502  GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
              PG V  L    +  ++  + W +P + NG++ GY+I ++ V G     L+  L    +
Sbjct: 896  DKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQISWE-VYGRNDSRLMHTL----N 950

Query: 562  PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVIS 621
             TT   K+ GL   T Y I +A  T  G G  +     +    P ++ G    P+NLVIS
Sbjct: 951  STTHEYKIQGLSSLTTYTIDVAAVTAVGTGLVTSST--ISSGVPPDLPG---APSNLVIS 1005



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 2/142 (1%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP N   +  + A +  V+W+P  P+S  G+ +GYK+  W E D +    +  V   
Sbjct: 1627 PAMAPQNVQ-VTPLTASQLEVTWDPPPPESQNGNIQGYKIYYW-EADSQNETEKTKVLFL 1684

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
                  +      +K    + AFN A +GP S+     T +  PG    L    + S+  
Sbjct: 1685 PEPVVRLKNLTSHTKYLVSISAFNAAGDGPRSDPRQGRTHQAAPGAPSFLAFSEITSTTL 1744

Query: 521  YLKWVKPEQPNGVLMGYKIKYQ 542
             + W +P   NG+L GY++ Y+
Sbjct: 1745 NVSWGEPVAANGILQGYRVVYE 1766



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 101/275 (36%), Gaps = 29/275 (10%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           APYF  EP       E   +   C A G    E  W+H+   ++             +  
Sbjct: 29  APYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMHDDSELTTYSSE-------YKYI 81

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR-V 242
           I +L+K D G Y C   N +G + +      +A+     +  + +    G   +L    +
Sbjct: 82  IPSLQKLDAGFYRCVVRNRMGALLQRKSEVHVAYMGNFMDTDQRKTVSQGHAAILNLLPI 141

Query: 243 FGAPKPEVNWIH-NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNK--------- 292
              P+P+V W     K +   R  I     L I     +D+G Y   A N+         
Sbjct: 142 TSYPRPQVTWFREGHKIIPSNRIAITLENQLVILATTPSDTGAYYVQAVNEKNGENKTSP 201

Query: 293 ---LGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSE 348
              L  A+  G+      T I   P +  V AG S  T  C A + P  +LS+ W R   
Sbjct: 202 FIHLSIARDIGTPETMAPT-IVVPPGNRSVVAGSSETTLECIASARPVEELSVTWKRNGV 260

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            I        + +    LT++  +  D+G Y C A
Sbjct: 261 RIT-----SGLHNFGRRLTISNPTSADTGLYVCEA 290



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 12/208 (5%)

Query: 397  TVQVPLE-APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIR 453
            T+Q P + AP++ T ++        + W P+      G+    GY+++ W   D + S+ 
Sbjct: 1094 TLQAPPDVAPASVT-VRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYW-RSDVQSSVL 1151

Query: 454  ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEA 512
              +V+        +++     +   ++ AFN    GP SE++   T E VP    +++ A
Sbjct: 1152 AQVVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRESVPSAAPENVSA 1211

Query: 513  IPLGSSAFYLKWVK-PEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
              + S+   L W   PEQ  NG+++GYKI +++ K     P   R   +    T SA LA
Sbjct: 1212 EAVSSTQILLTWASVPEQDQNGLILGYKILFRA-KDLDAEP---RSHVVRGNHTQSALLA 1267

Query: 571  GLEPSTKYRIHLAGYTKAGDGAESKYLF 598
            GL     Y + +  +T+ G+G  S  L 
Sbjct: 1268 GLRKFVLYELQVLAFTRIGNGVPSTPLI 1295



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 3/144 (2%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V  Q   G   GYK+  +  KD +   R  +V  
Sbjct: 1201 VPSAAPENVS-AEAVSSTQILLTWASVPEQDQNGLILGYKI-LFRAKDLDAEPRSHVVRG 1258

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-IISFVTPEGVPGTVQSLEAIPLGSS 518
              + +  +           +VLAF    NG PS  +I   T +  PG    L    +  +
Sbjct: 1259 NHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLT 1318

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQ 542
            +  + W  PE+PNG+++GY+I Y+
Sbjct: 1319 SVRIVWQPPEEPNGIILGYQIAYR 1342



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 93/229 (40%), Gaps = 30/229 (13%)

Query: 391  EAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV--QTWTEKD 447
            E +A  T+Q VP E P + +      +   ++ W P   +SL G  +GY++  +    + 
Sbjct: 1493 ETEAVTTLQDVPGEPPGSVSATPHTTSS-VLIQWQPPRDESLNGLLQGYRIYYRELEYEA 1551

Query: 448  GEGS----IRELIVNKGESTTTEVDKFVPAS-----------KNFARVLAFNGAYN---- 488
            G G+    ++  I  + E T     K V +S           K + R      AYN    
Sbjct: 1552 GSGTEAKMLKSPIALRAELTAQSSFKTVNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGE 1611

Query: 489  GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
             P S  +     E  P    Q+++  PL +S   + W    PE  NG + GYKI Y    
Sbjct: 1612 SPASTPVEVFVGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEAD 1671

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
                    + L ++ +P     +L  L   TKY + ++ +  AGDG  S
Sbjct: 1672 SQNETEKTKVL-FLPEPV---VRLKNLTSHTKYLVSISAFNAAGDGPRS 1716



 Score = 43.1 bits (100), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 66/166 (39%), Gaps = 8/166 (4%)

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
           TE    +  ++G  +VLTC   G+   E  W+H+  ELT    T        I  +   D
Sbjct: 34  TEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMHDDSELT----TYSSEYKYIIPSLQKLD 89

Query: 282 SGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           +G Y C  RN++G   Q    + V    +  D  +   V  G +A      ++    +  
Sbjct: 90  AGFYRCVVRNRMGALLQRKSEVHVAYMGNFMDTDQRKTVSQGHAAILNLLPITS-YPRPQ 148

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + W R    I   +  R   + +  L +  ++  D+G Y  +A  E
Sbjct: 149 VTWFREGHKIIPSN--RIAITLENQLVILATTPSDTGAYYVQAVNE 192



 Score = 42.4 bits (98), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 103/254 (40%), Gaps = 27/254 (10%)

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFVTPEGVPGTVQ-SLEAIPLGSS 518
            E+T   V++  P +    R+ A N   +    SE  +  T + VPG    S+ A P  +S
Sbjct: 1460 EATACIVERLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTS 1519

Query: 519  AFYLKWVKP--EQPNGVLMGYKIKYQSVK-----GTKV----GPLLERLPYI-------- 559
            +  ++W  P  E  NG+L GY+I Y+ ++     GT+      P+  R            
Sbjct: 1520 SVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKMLKSPIALRAELTAQSSFKTV 1579

Query: 560  -SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYV----PFKNPDNVEGRGS 613
             S  T+T  +L  L+   +Y + +  Y   G+  A +    +V    P   P NV+    
Sbjct: 1580 NSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASTPVEVFVGEAAPAMAPQNVQVTPL 1639

Query: 614  TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
            T + L ++W   P    N     Y+I++   ++     +  VL   +  + L N  +   
Sbjct: 1640 TASQLEVTWDPPPPESQNGNIQGYKIYYWEADSQNETEKTKVLFLPEPVVRLKNLTSHTK 1699

Query: 674  YEIKVVQTWTEKDG 687
            Y + +       DG
Sbjct: 1700 YLVSISAFNAAGDG 1713


>gi|296488522|tpg|DAA30635.1| TPA: neuronal cell adhesion molecule isoform 2 [Bos taurus]
          Length = 1183

 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 138/392 (35%), Positives = 201/392 (51%), Gaps = 15/392 (3%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEF 96
           +RK+E  LR   + L CI  G P P   W K DG +PIN   R    N+ K+L I  V  
Sbjct: 272 SRKEE--LRGNVLSLECIAEGLPTPIIYWIKEDGTLPIN---RTFYRNFKKTLQIVQVTE 326

Query: 97  SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           +D G+Y C   N +G A  ++I ++V AAPY+ + P+ +  + EE  T  C+A+G P+P 
Sbjct: 327 ADSGNYQCIAKNALG-AIHHTISVTVKAAPYWIIAPQNLVLSPEEDGTLICRANGNPKPR 385

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           I W+ NG PI  AP +P RK+  + I    +++  +  Y CNA+N  GY+  + +VNVLA
Sbjct: 386 ISWLSNGVPIEIAPDDPSRKIDGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLA 445

Query: 217 HAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLK 273
             P I  +    Y V   +  +L C  FG+P P + W    K   L    Y + E G L+
Sbjct: 446 EPPRILTSANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALREDIYVLHENGTLE 505

Query: 274 ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVS 333
           I       +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G + +F C    
Sbjct: 506 IPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDPTRIIKQPEYAVVQRGSTVSFECKVKH 565

Query: 334 DPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393
           D +L  +++WL+     +  ++ RF    D  L V   ++ D G YTC A T LD + A 
Sbjct: 566 DHTLIPTVMWLKDHG--ELPNDGRFTVDKD-RLVVADVNDDDGGTYTCVANTTLDNVSAS 622

Query: 394 ATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           A L+V      P +  L   +D +   +SW P
Sbjct: 623 AVLSVVDVPNPPFDLELTDQLD-RSVQLSWTP 653



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 144/557 (25%), Positives = 232/557 (41%), Gaps = 54/557 (9%)

Query: 143 VTFECKASGLPEPEIHWVHNGK--PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
           ++ EC A GLP P I+W+      PI++      +K     + I  + ++D+GNY C A 
Sbjct: 282 LSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKKT----LQIVQVTEADSGNYQCIAK 337

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK--E 258
           N+LG ++  + V V A AP    AP++      +   L CR  G PKP ++W+ N    E
Sbjct: 338 NALGAIHHTISVTVKA-APYWIIAPQNLVLSPEEDGTLICRANGNPKPRISWLSNGVPIE 396

Query: 259 LTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPE 315
           +     +    GD  I + V    S  Y C A N+ G    +  + V       +T    
Sbjct: 397 IAPDDPSRKIDGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTSANT 456

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
            Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + +  
Sbjct: 457 LYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALR-EDIYVLHENGTLEIPVAQKDS 513

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           +G YTC A+ +L   +    L ++ P   ++ P  + ++Q    + + VS+       ++
Sbjct: 514 TGTYTCVARNKLGMAKNDVHLEIKDPTRIIKQPE-YAVVQ----RGSTVSFE----CKVK 564

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN-----FARVLAFNGAY 487
                     W +  GE      + N G   T + D+ V A  N         +A     
Sbjct: 565 HDHTLIPTVMWLKDHGE------LPNDGR-FTVDKDRLVVADVNDDDGGTYTCVANTTLD 617

Query: 488 NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
           N   S ++S V    VP     LE       +  L W   +  N  +  + I+Y+     
Sbjct: 618 NVSASAVLSVV---DVPNPPFDLELTDQLDRSVQLSWTPGDDNNSPITKFIIEYEDAMHE 674

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV--P 601
              P L         T T+A+L  L P   Y   +      G      A  +YL     P
Sbjct: 675 ---PGLWHHQTEVPGTQTTAQLK-LSPYVNYSFRVMAENNLGRSLPSEASEQYLTKAAEP 730

Query: 602 FKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQS 661
            KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W    V+    S
Sbjct: 731 DKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS--VVVANVS 788

Query: 662 ELVLANQPTFQPYEIKV 678
           + +++  PTF PY IKV
Sbjct: 789 KYIVSGTPTFVPYLIKV 805



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 96/201 (47%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 828  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRNRRHIEKK 886

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 887  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDKVFNTPEGVPSAPSSLKIVN 946

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 947  PTLDSLTLEWEPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIP----ANKTRWILKNL 1002

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G +
Sbjct: 1003 NFSTRYKFYFYAQTAAGSGIQ 1023



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 151/608 (24%), Positives = 232/608 (38%), Gaps = 77/608 (12%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I   V+      Y C  S
Sbjct: 374 LICRANGNPKPRISWLSNGVPIEIAPDDPSRKID----GDTIIFSKVQERSSAVYQCNAS 429

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T                +C   G P P I W    K 
Sbjct: 430 NEYGYLLANAF-VNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 487

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    DV++ +      I + 
Sbjct: 488 -GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPTRIIKQ 545

Query: 225 PKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P+      G TV   C+V       P V W+ +  EL   GR+T+ +   L + DV   D
Sbjct: 546 PEYAVVQRGSTVSFECKVKHDHTLIPTVMWLKDHGELPNDGRFTV-DKDRLVVADVNDDD 604

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G YTC A   L     S  L+V +   + + P D E+              D S++LS 
Sbjct: 605 GGTYTCVANTTLDNVSASAVLSVVD---VPNPPFDLELTDQL----------DRSVQLS- 650

Query: 342 VWLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQA 394
            W  G +   PI     E E    +   +           + Q          F + A+ 
Sbjct: 651 -WTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVPGTQTTAQLKLSPYVNYSFRVMAEN 709

Query: 395 TLTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQ 441
            L   +P EA   +           T ++ + ++    V++W P++     G    YKV 
Sbjct: 710 NLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV- 768

Query: 442 TWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFV- 498
           +W +KDG+     ++V N  +   +    FVP      +V A N A   P P+ ++    
Sbjct: 769 SWRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDAGFAPEPAAVMGHSG 825

Query: 499 --TPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKG--TKVGPL 552
              P   PG V+      + S+   + W  V  +   G L GY+I Y   +   T+    
Sbjct: 826 EDLPMVAPGNVR---VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRNRRH 882

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRG 612
           +E+       + T   L GLEP + Y +++      G+G  S      P K  +  EG  
Sbjct: 883 IEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPAS------PDKVFNTPEGVP 936

Query: 613 STPNNLVI 620
           S P++L I
Sbjct: 937 SAPSSLKI 944



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 131/344 (38%), Gaps = 57/344 (16%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNGKPIS-QAP 170
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  ISALEVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPSPSFSWTRNGTHFDIDKD 86

Query: 171 PNPRRKVGPNRITIENLR--KSDT--GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
           P    K G   +TI  +   K++T  G Y C A N  G    +  V   + +P  T+   
Sbjct: 87  PLVTMKPGSGTLTINIMSEGKAETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKL 146

Query: 227 DEYTV-DGKTVVLTCRVFGAPKPEVN-WIHN--QKELTGGRYTILETGDLKITDVAFADS 282
           +   + +G+++VL CR      P +  W+ N  Q+     R +    GDL  ++V   D+
Sbjct: 147 EPIILRNGQSLVLPCRPPIGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDT 206

Query: 283 GE-YTCFAR-NKLGTAQGSGSLTVKE------HTHITDQPEDYEVEAGQSATFRCNAVSD 334
            E Y C+AR N   T Q    ++VK       +  I     D E    +S   R      
Sbjct: 207 REDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFYGAKSHRQRPPTFLT 266

Query: 335 PSLKLS-----------------------IVWLR--GSEPIDFESEPRFVQSNDYSLTVT 369
           P    S                       I W++  G+ PI+      F ++   +L + 
Sbjct: 267 PDGNTSRKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINR----TFYRNFKKTLQIV 322

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
           + +E DSG Y C A+  L  I    ++TV+     + AP N  L
Sbjct: 323 QVTEADSGNYQCIAKNALGAIHHTISVTVKAAPYWIIAPQNLVL 366


>gi|297287847|ref|XP_001105243.2| PREDICTED: protein sidekick-1-like [Macaca mulatta]
          Length = 2138

 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 210/716 (29%), Positives = 299/716 (41%), Gaps = 83/716 (11%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
           + V   + +  L CI    P+      W ++GV      RI+ G  ++G+ L I +   +
Sbjct: 245 RSVVAGSSETTLECIASARPVEDLSVTWKRNGV------RITSGLHSFGRRLTISNPTSA 298

Query: 98  DQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPE 154
           D G Y CE +      E       L +   PYFT EPE  I+A  EETV   C+A G+P 
Sbjct: 299 DTGLYVCEAALLGSAFEPARAKAFLFITEPPYFTAEPESRISAEVEETVDIRCQAMGVPL 358

Query: 155 PEIHWVHNGKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P + W  +   IS+   NPR KV     + I+ LR  D+G + C A+N  G +    Y++
Sbjct: 359 PTLQWYKDAISISRLQ-NPRYKVLASGGLRIQKLRPEDSGIFQCFASNEGGEIQTHTYLD 417

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V   AP  T+ P D    DG T +L C V GAPKP + W      L  G     R+ +LE
Sbjct: 418 VTNIAPVFTQRPADTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLE 477

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L+I  V   D+G YTC+A N  G+   S +LTV   T I   PED+ V  G +AT  
Sbjct: 478 SGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNRTSIVHPPEDHVVIKGTTATLH 537

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A  DP + L  VW + +  +   S  R V   D SL ++++   D G YTC   +E  
Sbjct: 538 CGATHDPRVSLRYVWKKDNVALTPSSTSRIVVEKDGSLLISQTWSGDIGDYTCEIVSEGG 597

Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV-SWNPVSPQSLRGHFRGYKVQTWTEKD 447
                A L V     +P N           AVV SW  V P         Y V+  +E +
Sbjct: 598 NDSRMARLEVIELPHSPQNLLASPNSSHSHAVVLSW--VRPFDGNSPILYYIVEL-SENN 654

Query: 448 GEGSIRELIVNKG-ESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEG 502
               +   + N G E T   V    PA     RV A N    G Y+   S ++    P  
Sbjct: 655 SPWKVH--LSNVGPEMTGVTVGGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPS 712

Query: 503 VPGTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560
            P   +++ A    + +  ++W  P +   NGVL GY ++Y+ + G   G   +R   I+
Sbjct: 713 APP--KNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYR-LAGLP-GEYQQR--NIT 766

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEGRGSTP 615
            P      +  L   T+Y I +A Y  AG G  S+      L  VP   P NV+      
Sbjct: 767 SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNS 826

Query: 616 NNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYE 675
             +   W   P+   N  +  Y++         AW  D                   P  
Sbjct: 827 TTIQFLWNPPPQQFINGINQGYKLL--------AWPAD------------------APEA 860

Query: 676 IKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
           + VV    +  G        V+ G    T + KF   +  F  VL F    +GPPS
Sbjct: 861 VTVVTIAPDFHG--------VHHGH--VTNLKKF---TAYFTSVLCFTTPGDGPPS 903



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 177/667 (26%), Positives = 265/667 (39%), Gaps = 90/667 (13%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN-GVGEAK-SYSI 118
           P PQ  W ++G  I PS+RI+       L+I     SD G+Y  +  N   GE K S  I
Sbjct: 163 PRPQVTWFREGHKIIPSNRIAI-TLENQLVILATTASDAGAYYVQAVNEKNGENKTSPFI 221

Query: 119 DLSV-------LAAPYFTVEP--EFINAAEEETVTFECKASGLP--EPEIHWVHNGKPIS 167
            LS+         AP   V P    + A   ET T EC AS  P  +  + W  NG  I+
Sbjct: 222 HLSIANIGTPETTAPTIVVPPGNRSVVAGSSET-TLECIASARPVEDLSVTWKRNGVRIT 280

Query: 168 QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV---LAHAPEITEA 224
               +  R     R+TI N   +DTG Y C A   LG  ++         +   P  T  
Sbjct: 281 SGLHSFGR-----RLTISNPTSADTGLYVCEAA-LLGSAFEPARAKAFLFITEPPYFTAE 334

Query: 225 PKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITDVAFA 280
           P+   + +  +TV + C+  G P P + W  +      L   RY +L +G L+I  +   
Sbjct: 335 PESRISAEVEETVDIRCQAMGVPLPTLQWYKDAISISRLQNPRYKVLASGGLRIQKLRPE 394

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHI-TDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           DSG + CFA N+ G  Q    L V     + T +P D  V  G +A  RC     P  K 
Sbjct: 395 DSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRPADTTVTDGMTAILRCEVSGAP--KP 452

Query: 340 SIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +I W R +  +   S   PRF+      L +      D+G YTC A      + A ATLT
Sbjct: 453 AITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLT 512

Query: 398 V---QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQ-SLRGHFRGYKV--------QTWTE 445
           V      +  P +  +I+   A     + +   P+ SLR  ++   V        +   E
Sbjct: 513 VWNRTSIVHPPEDHVVIKGTTATLHCGATH--DPRVSLRYVWKKDNVALTPSSTSRIVVE 570

Query: 446 KDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPG 505
           KDG   I +         T E+   V    N +R+            E+I        P 
Sbjct: 571 KDGSLLISQTWSGDIGDYTCEI---VSEGGNDSRMARL---------EVIEL------PH 612

Query: 506 TVQSLEAIPLG--SSAFYLKWVKPEQPNGVLMGYKIKYQ------SVKGTKVGPLLERLP 557
           + Q+L A P    S A  L WV+P   N  ++ Y ++         V  + VGP +    
Sbjct: 613 SPQNLLASPNSSHSHAVVLSWVRPFDGNSPILYYIVELSENNSPWKVHLSNVGPEM---- 668

Query: 558 YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG---AESKYLFY---VPFKNPDNVEGR 611
                  T   + GL P+  Y+  +    + G G   AE+  L      P   P N+   
Sbjct: 669 -------TGVTVGGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVAS 721

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
           G T  ++++ W   PE EHN     Y + +R       + Q ++     +  ++ +   +
Sbjct: 722 GRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNITSPEVNYCLVTDLIIW 781

Query: 672 QPYEIKV 678
             YEI+V
Sbjct: 782 TQYEIQV 788



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 100/240 (41%), Gaps = 23/240 (9%)

Query: 389  FIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
            F  A    T+Q VP   P N    + +++      WNP   Q + G  +GYK+  W    
Sbjct: 799  FSRAVTEYTLQGVPTAPPQNVQ-TEAVNSTTIQFLWNPPPQQFINGINQGYKLLAWPADA 857

Query: 448  GEGSIRELI------VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
             E      I      V+ G    T + KF   +  F  VL F    +GPPS      T E
Sbjct: 858  PEAVTVVTIAPDFHGVHHGH--VTNLKKF---TAYFTSVLCFTTPGDGPPSTPQLVWTHE 912

Query: 502  GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
              PG V  L    +  ++  + W +P + NG++ GY+I ++       G    RL +  +
Sbjct: 913  DKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQISWEV-----YGRNDSRLTHTLN 967

Query: 562  PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVIS 621
             TT   K+ GL   T Y I +A  T  G G  +     +    P ++ G    P+NLVIS
Sbjct: 968  STTHEYKIQGLSSLTTYTIDVAALTAVGAGLLTSST--ISSGVPPDLPG---APSNLVIS 1022



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 88/374 (23%), Positives = 138/374 (36%), Gaps = 31/374 (8%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           ++ L   ++ L C+  G+   +  W +DG  +      S+  Y    II  ++  D G Y
Sbjct: 58  QIHLEGNRLVLTCLAEGSWPLEFKWMRDGRELTTYS--SEYKY----IIPSLQKLDAGFY 111

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFE-CKASGLPEPEIHWVH 161
            C V N +G       ++ V     FT   +     +           +  P P++ W  
Sbjct: 112 RCVVRNRMGALLQRKSEVQVAYMGSFTDTDQRKTVPQGRAAILNLLPITSYPRPQVTWFR 171

Query: 162 NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD---VYVNVL--- 215
            G  I   P N       N++ I     SD G Y   A N      K    +++++    
Sbjct: 172 EGHKI--IPSNRIAITLENQLVILATTASDAGAYYVQAVNEKNGENKTSPFIHLSIANIG 229

Query: 216 ---AHAPEITEAPKDEYTVDGKT-VVLTCRVFGAPKPE--VNWIHNQKELTGGRYTILET 269
                AP I   P +   V G +   L C     P  +  V W  N   +T G ++    
Sbjct: 230 TPETTAPTIVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGVRITSGLHSFGR- 288

Query: 270 GDLKITDVAFADSGEYTCFARNKLGT----AQGSGSLTVKEHTHITDQPED-YEVEAGQS 324
             L I++   AD+G Y C A   LG+    A+    L + E  + T +PE     E  ++
Sbjct: 289 -RLTISNPTSADTGLYVCEA-ALLGSAFEPARAKAFLFITEPPYFTAEPESRISAEVEET 346

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
              RC A+  P   L   W + +  I     PR+       L + K    DSG + C A 
Sbjct: 347 VDIRCQAMGVPLPTLQ--WYKDAISISRLQNPRYKVLASGGLRIQKLRPEDSGIFQCFAS 404

Query: 385 TELDFIEAQATLTV 398
            E   I+    L V
Sbjct: 405 NEGGEIQTHTYLDV 418



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 2/142 (1%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP N   +  + A +  V+W+P  P+S  G+ +GYK+  W E D +    ++ V   
Sbjct: 1624 PAMAPQNVQ-VTPLTASQLEVTWDPPPPESQNGNIQGYKIYYW-EADSQNDTEKMKVLFL 1681

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
                  +      ++    + AFN A +GP S+     T +  PG    L    + S+  
Sbjct: 1682 PEPVVRLKNLTSHTEYLVSISAFNAAGDGPRSDPRQGRTHQAAPGAPSFLAFSEITSTTL 1741

Query: 521  YLKWVKPEQPNGVLMGYKIKYQ 542
             + W +P   NG+L GY++ Y+
Sbjct: 1742 NVSWGEPAAANGILQGYRVVYE 1763



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 104/273 (38%), Gaps = 26/273 (9%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           APYF  EP       E   +   C A G    E  W+ +G+ ++             +  
Sbjct: 47  APYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMRDGRELTTYSSE-------YKYI 99

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR-V 242
           I +L+K D G Y C   N +G + +      +A+    T+  + +    G+  +L    +
Sbjct: 100 IPSLQKLDAGFYRCVVRNRMGALLQRKSEVQVAYMGSFTDTDQRKTVPQGRAAILNLLPI 159

Query: 243 FGAPKPEVNWIH-NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGS- 299
              P+P+V W     K +   R  I     L I     +D+G Y   A N K G  + S 
Sbjct: 160 TSYPRPQVTWFREGHKIIPSNRIAITLENQLVILATTASDAGAYYVQAVNEKNGENKTSP 219

Query: 300 ------GSLTVKEHTH--ITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEPI 350
                  ++   E T   I   P +  V AG S  T  C A + P   LS+ W R    I
Sbjct: 220 FIHLSIANIGTPETTAPTIVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGVRI 279

Query: 351 DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
                   + S    LT++  +  D+G Y C A
Sbjct: 280 T-----SGLHSFGRRLTISNPTSADTGLYVCEA 307



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 10/207 (4%)

Query: 397  TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIRE 454
            T+Q P +       ++        + W P+      G+    GY+++ W       ++ +
Sbjct: 1111 TLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRSDLQSSALAQ 1170

Query: 455  LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEAI 513
            ++ ++ E   T +++     +   ++ AFN    GP SE++   T E VP    +++ A 
Sbjct: 1171 VVSDRLEREFT-IEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRESVPSAAPENVSAE 1229

Query: 514  PLGSSAFYLKWVK-PEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAG 571
             + S+   L W   PEQ  NG+++GYKI +++ K     P   R   +    T SA LAG
Sbjct: 1230 AVSSTQILLTWASVPEQDQNGLILGYKILFRA-KDLDPEP---RSHTVRGNYTQSALLAG 1285

Query: 572  LEPSTKYRIHLAGYTKAGDGAESKYLF 598
            L     Y + +  +T+ G+G  S  L 
Sbjct: 1286 LRKFVLYELQVLAFTRIGNGVPSTPLI 1312



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 87/219 (39%), Gaps = 30/219 (13%)

Query: 391  EAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE 449
            E +A  T+Q VP E P + +      +   ++ W P   +SL G  +GY++         
Sbjct: 1510 ETEAVTTLQDVPGEPPGSVSATPHTTSS-VLIQWQPPRDESLNGLLQGYRIY-------- 1560

Query: 450  GSIRELIVNKGESTTTEVDKFVPA-------SKNFARVLAFNGAYN----GPPSEIISFV 498
               REL    G  T  +  K   A        K + R      AYN     P S  +   
Sbjct: 1561 --YRELEYEAGSGTEAKTLKSPIALRAELTDLKKYRRYEVIMTAYNIIGESPASAPVEVF 1618

Query: 499  TPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
              E  P    Q+++  PL +S   + W    PE  NG + GYKI Y           ++ 
Sbjct: 1619 VGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEADSQNDTEKMKV 1678

Query: 556  LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            L ++ +P     +L  L   T+Y + ++ +  AGDG  S
Sbjct: 1679 L-FLPEPV---VRLKNLTSHTEYLVSISAFNAAGDGPRS 1713



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 94/226 (41%), Gaps = 29/226 (12%)

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFVTPEGVPGTVQ-SLEAIPLGSS 518
            E+T   VD+  P +    R+ A N   +    SE  +  T + VPG    S+ A P  +S
Sbjct: 1477 EATACIVDRLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTS 1536

Query: 519  AFYLKWVKP--EQPNGVLMGYKIKYQSVK-----GTKVGPLLERLPYISDPTTTSAKLAG 571
            +  ++W  P  E  NG+L GY+I Y+ ++     GT+   L         P    A+L  
Sbjct: 1537 SVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTL-------KSPIALRAELTD 1589

Query: 572  LEPSTKYRIHLAGYTKAGDG-AESKYLFYV----PFKNPDNVEGRGSTPNNLVISWTAMP 626
            L+   +Y + +  Y   G+  A +    +V    P   P NV+    T + L ++W   P
Sbjct: 1590 LKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTPLTASQLEVTWDPPP 1649

Query: 627  EIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
                N     Y+I++        W  D   D  + +++   +P  +
Sbjct: 1650 PESQNGNIQGYKIYY--------WEADSQNDTEKMKVLFLPEPVVR 1687



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 11/148 (7%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V  Q   G   GYK+  +  KD +   R   V +
Sbjct: 1218 VPSAAPENVS-AEAVSSTQILLTWASVPEQDQNGLILGYKI-LFRAKDLDPEPRSHTV-R 1274

Query: 460  GESTTTEV----DKFVPASKNFARVLAFNGAYNGPPSE-IISFVTPEGVPGTVQSLEAIP 514
            G  T + +     KFV       +VLAF    NG PS  +I   T +  PG    L    
Sbjct: 1275 GNYTQSALLAGLRKFVLYE---LQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPE 1331

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
            +  ++  + W  PE+PNG+++GY+I Y+
Sbjct: 1332 VRLTSVRIVWQPPEEPNGIILGYQIAYR 1359



 Score = 41.6 bits (96), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 65/166 (39%), Gaps = 8/166 (4%)

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
           TE    +  ++G  +VLTC   G+   E  W+ + +ELT    T        I  +   D
Sbjct: 52  TEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMRDGRELT----TYSSEYKYIIPSLQKLD 107

Query: 282 SGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           +G Y C  RN++G   Q    + V      TD  +   V  G++A      ++    +  
Sbjct: 108 AGFYRCVVRNRMGALLQRKSEVQVAYMGSFTDTDQRKTVPQGRAAILNLLPITS-YPRPQ 166

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + W R    I   +       N   +  T +S  D+G Y  +A  E
Sbjct: 167 VTWFREGHKIIPSNRIAITLENQLVILATTAS--DAGAYYVQAVNE 210


>gi|345782838|ref|XP_848767.2| PREDICTED: LOW QUALITY PROTEIN: neuronal cell adhesion molecule
           isoform 2 [Canis lupus familiaris]
          Length = 1303

 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 172/550 (31%), Positives = 251/550 (45%), Gaps = 45/550 (8%)

Query: 25  SASQNRHAPK-----QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPS 77
           SA  NR  P      +   + K+E  LR   + L CI  G P P   W K DG +PIN  
Sbjct: 259 SAKSNRERPPTFLTPEGNASHKEE--LRGNVLSLECIAEGLPTPIIYWIKEDGTLPIN-- 314

Query: 78  DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINA 137
            R    N+ K+L I  V  +D G+Y C   N +G A  ++I ++V AAPY+ + P+ +  
Sbjct: 315 -RTFYRNFKKTLQIIQVSEADSGNYQCIAKNALG-AIHHTITVTVKAAPYWIMAPQNLVL 372

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  E  T  C+A+G P+P I W+ NG PI  AP +P RK+  + I   N+++  +  Y C
Sbjct: 373 SPGEDGTLICRANGNPKPRISWLSNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQC 432

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDG-KTVVLTCRVFGAPKPEVNWIHNQ 256
           NA+N  GY+  + +VNVLA  P I  +    Y V   +  +L C  FG+P P + W    
Sbjct: 433 NASNEYGYLLANTFVNVLAEPPRILTSANTLYQVIADRPALLDCAFFGSPLPTIEWFKGA 492

Query: 257 K--ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
           K   L    Y + E G L+I       +G YTC ARNKLG A+    L VK+ T I  QP
Sbjct: 493 KGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGVAKNEVHLEVKDATRIIKQP 552

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           E   V+ G + +F C    D +L  +I WL+ +   +  ++ RF    D+ L V    + 
Sbjct: 553 EYAVVQRGSTVSFECKVKHDHTLIPTITWLKDNG--ELPNDGRFTVDKDH-LVVADVRDN 609

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPS----------NFTLIQVIDAKKAVVSWN 424
           D G YTC A T LD + A A L+V  P   P+          +  L   +D K   +SW 
Sbjct: 610 DGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNPPFDLELTDQLD-KSVQLSWT 668

Query: 425 PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN 484
           P    +       + ++        G         G  TT ++ K  P      RV+A N
Sbjct: 669 PGDDNN--SPIIKFIIEYEDAMHEAGLWHHQTEVSGMQTTAQL-KLSPYVNYSFRVMAIN 725

Query: 485 GAYNGPPSE-----IISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPE---QPNGVLMG 536
                 PSE     +     P+  P  V+ L + P       + W KP    + NG  + 
Sbjct: 726 NLGRSLPSEASEQYLTKAAEPDTNPTAVEGLGSEP---DNLVITW-KPLNGFESNGPGLQ 781

Query: 537 YKIKYQSVKG 546
           YK+ ++   G
Sbjct: 782 YKVSWRQKDG 791



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 147/595 (24%), Positives = 241/595 (40%), Gaps = 69/595 (11%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
            + ++   L C F G+PLP   W K        + I   +   +L I   +    G+YTC 
Sbjct: 467  IADRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCV 526

Query: 106  VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPE--PEIHWVHNG 163
              N +G AK+  + L V  A     +PE+       TV+FECK        P I W+ + 
Sbjct: 527  ARNKLGVAKN-EVHLEVKDATRIIKQPEYAVVQRGSTVSFECKVKHDHTLIPTITWLKDN 585

Query: 164  KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP---- 219
                + P + R  V  + + + ++R +D G Y C A  +L  V     ++V+A  P    
Sbjct: 586  ---GELPNDGRFTVDKDHLVVADVRDNDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAP 642

Query: 220  --EITEAPKDEYTVD--GKTVVLT--------------CRVFGAPKPEVNWIHNQKELTG 261
              ++   P D    D   K+V L+                 +     E    H+Q E++G
Sbjct: 643  IYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPIIKFIIEYEDAMHEAGLWHHQTEVSG 702

Query: 262  GRYTILETGDLKITDVAFADSGEYTCFARNKLGTA---QGSGSLTVKEHTHITD------ 312
                +  T  LK++      +  +   A N LG +   + S     K     T+      
Sbjct: 703  ----MQTTAQLKLSPYV---NYSFRVMAINNLGRSLPSEASEQYLTKAAEPDTNPTAVEG 755

Query: 313  ---QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
               +P++  +       F  N    P L+  + W +     ++ S    V +N     V+
Sbjct: 756  LGSEPDNLVITWKPLNGFESNG---PGLQYKVSWRQKDGDDEWTS---VVVANVSKYIVS 809

Query: 370  KSSELDSGQYTCRAQTELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVSWNP 425
             +          +A  ++ F    A +       +P+ AP N   + V+++  A V W+P
Sbjct: 810  GTPTFVPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVR-VNVVNSTLAEVHWDP 868

Query: 426  VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK-----GESTTTEVDKFVPASKNFARV 480
            V  +S+RGH +GY++  W  +      R  I  K     G  T   +    P S     V
Sbjct: 869  VPLKSIRGHLQGYRIYYWKAQGSSKRNRRHIEKKILTFQGSKTHGMLPGLEPYSHYTLNV 928

Query: 481  LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
               NG   GP S    F TPEGVP    SL+ +     +  L+W  P +PNG+L  Y +K
Sbjct: 929  RVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVNPTLDSLTLEWDPPSRPNGILTEYTLK 988

Query: 541  YQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
            YQ +  T ++GPL++ ++P       T   L  L  ST+Y+ +    T AG G++
Sbjct: 989  YQPINSTHELGPLVDLKIP----ANKTRWTLKNLNFSTRYKFYFYAQTAAGSGSQ 1039



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 145/575 (25%), Positives = 238/575 (41%), Gaps = 61/575 (10%)

Query: 136 NAAEEE-----TVTFECKASGLPEPEIHWVHNGK--PISQAPPNPRRKVGPNRITIENLR 188
           NA+ +E      ++ EC A GLP P I+W+      PI++      +K     + I  + 
Sbjct: 276 NASHKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKKT----LQIIQVS 331

Query: 189 KSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKP 248
           ++D+GNY C A N+LG ++  + V V A AP    AP++     G+   L CR  G PKP
Sbjct: 332 EADSGNYQCIAKNALGAIHHTITVTVKA-APYWIMAPQNLVLSPGEDGTLICRANGNPKP 390

Query: 249 EVNWIHNQK--ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
            ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    +  + V 
Sbjct: 391 RISWLSNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANTFVNVL 450

Query: 306 EHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSND 363
                 +T     Y+V A + A   C     P    +I W +G++      E  +V   +
Sbjct: 451 AEPPRILTSANTLYQVIADRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHEN 507

Query: 364 YSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ--VPLEAPSNFTLIQVIDAKKAVV 421
            +L +  + +  +G YTC A+ +L   + +  L V+    +     + ++Q    + + V
Sbjct: 508 GTLEIPVAQKDSTGTYTCVARNKLGVAKNEVHLEVKDATRIIKQPEYAVVQ----RGSTV 563

Query: 422 SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS-----KN 476
           S+       ++         TW + +GE      + N G  T  + D  V A        
Sbjct: 564 SFE----CKVKHDHTLIPTITWLKDNGE------LPNDGRFTVDK-DHLVVADVRDNDGG 612

Query: 477 FARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQ 529
               +A     N   S ++S V P   P  +  +   P           +  L W   + 
Sbjct: 613 TYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNPPFDLELTDQLDKSVQLSWTPGDD 672

Query: 530 PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
            N  ++ + I+Y+         L      +S   TT A+L  L P   Y   +      G
Sbjct: 673 NNSPIIKFIIEYED--AMHEAGLWHHQTEVSGMQTT-AQLK-LSPYVNYSFRVMAINNLG 728

Query: 590 DG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
                 A  +YL     P  NP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+
Sbjct: 729 RSLPSEASEQYLTKAAEPDTNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQ 788

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 789 KDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 821



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 150/613 (24%), Positives = 236/613 (38%), Gaps = 77/613 (12%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 380 LICRANGNPKPRISWLSNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T          +     +C   G P P I W    K 
Sbjct: 436 NEYGYLLANTF-VNVLAEPPRILTSANTLYQVIADRPALLDCAFFGSPLPTIEWFKGAK- 493

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    +V++ V   A  I + 
Sbjct: 494 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGVAKNEVHLEV-KDATRIIKQ 551

Query: 225 PKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P+      G TV   C+V       P + W+ +  EL   GR+T+ +   L + DV   D
Sbjct: 552 PEYAVVQRGSTVSFECKVKHDHTLIPTITWLKDNGELPNDGRFTV-DKDHLVVADVRDND 610

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHT-------HITDQPEDYEVEAGQSATFRCNAVSD 334
            G YTC A   L     S  L+V   T        + + P D E+              D
Sbjct: 611 GGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNPPFDLELTDQL----------D 660

Query: 335 PSLKLSIVWLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
            S++LS  W  G +   PI     E E    ++  +      S    + Q          
Sbjct: 661 KSVQLS--WTPGDDNNSPIIKFIIEYEDAMHEAGLWHHQTEVSGMQTTAQLKLSPYVNYS 718

Query: 389 F-IEAQATLTVQVPLEAP-----------SNFTLIQVIDAK--KAVVSWNPVSPQSLRGH 434
           F + A   L   +P EA            +N T ++ + ++    V++W P++     G 
Sbjct: 719 FRVMAINNLGRSLPSEASEQYLTKAAEPDTNPTAVEGLGSEPDNLVITWKPLNGFESNGP 778

Query: 435 FRGYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
              YKV +W +KDG+     ++V N  +   +    FVP      +V A N     P   
Sbjct: 779 GLQYKV-SWRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPA 834

Query: 494 IISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--K 548
           ++   + E +P     ++    + S+   + W  V  +   G L GY+I Y   +G+  +
Sbjct: 835 VVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQGSSKR 894

Query: 549 VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDN 607
               +E+       + T   L GLEP + Y +++      G+G A    +F  P      
Sbjct: 895 NRRHIEKKILTFQGSKTHGMLPGLEPYSHYTLNVRVVNGKGEGPASPDRVFNTP------ 948

Query: 608 VEGRGSTPNNLVI 620
            EG  S P++L I
Sbjct: 949 -EGVPSAPSSLKI 960



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 129/315 (40%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   +TI  +   K++T  G Y
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGSGTLTINIMSEGKAETYEGVY 121

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPE-VNWI 253
            C A N  G    +  V   + +P  T+   +  T+ +G++++L CR      P  + W+
Sbjct: 122 QCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLRNGQSLILPCRPPLGLPPPIIFWM 181

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVKE--- 306
            N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK    
Sbjct: 182 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISV 241

Query: 307 -------HTHITD-----------QPEDY---EVEAGQSATFRCNAVSDPSLKLS----- 340
                    +++D           +P  +   E  A      R N +S   +        
Sbjct: 242 DELNDTIAANLSDTEFYSAKSNRERPPTFLTPEGNASHKEELRGNVLSLECIAEGLPTPI 301

Query: 341 IVWLR--GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W++  G+ PI+      F ++   +L + + SE DSG Y C A+  L  I    T+TV
Sbjct: 302 IYWIKEDGTLPINR----TFYRNFKKTLQIIQVSEADSGNYQCIAKNALGAIHHTITVTV 357

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 358 KAAPYWIMAPQNLVL 372


>gi|211279|gb|AAA48632.1| cell adhesion molecule, partial [Gallus gallus]
          Length = 1260

 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 162/528 (30%), Positives = 242/528 (45%), Gaps = 48/528 (9%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           +V LR   + L CI  G P P   W K+G  + P++R    N+ K+L I  V  +D G+Y
Sbjct: 232 KVELRGNVLLLECIAAGLPTPVIRWIKEGGEL-PANRTFFENFKKTLKIIDVSEADSGNY 290

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C   N +G +  + I ++V AAPY+   P  +  +  E  T  C+A+G P+P I W+ N
Sbjct: 291 KCTARNTLG-STHHVISVTVKAAPYWITAPRNLVLSPGEDGTLICRANGNPKPSISWLTN 349

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI- 221
           G PI+ AP +P RKV  + I    +++  +  Y CNA+N  GY+  + +VNVLA  P I 
Sbjct: 350 GVPIAIAPEDPSRKVDGDTIIFSAVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRIL 409

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAF 279
           T A K    +     ++ C  FG+PKPE+ W    K   L G  Y   + G L+I     
Sbjct: 410 TPANKLYQVIADSPALIDCAYFGSPKPEIEWFRGVKGSILRGNEYVFHDNGTLEIPVAQK 469

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
             +G YTC ARNKLG  Q    L VK+ T I  QP+   ++    A+F C    DP+L  
Sbjct: 470 DSTGTYTCVARNKLGKTQNEVQLEVKDPTMIIKQPQYKVIQRSAQASFECVIKHDPTLIP 529

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           +++WL+ +   +   + RF+   D +LT+   ++ D G YTC   T LD + A A LTV 
Sbjct: 530 TVIWLKDNN--ELPDDERFLVGKD-NLTIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVV 586

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGS-IRELIVN 458
                P+      +I A+      NP     L G        +W   +   S I   ++ 
Sbjct: 587 AAPPTPA------IIYARP-----NPPLDLELTGQLERSIELSWVPGEENNSPITNFVIE 635

Query: 459 -----------------KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IIS 496
                             G  TT ++ K  P      RV+A N      PSE     +  
Sbjct: 636 YEDGLHEPGVWHYQTEVPGSQTTVQL-KLSPYVNYSFRVIAVNEIGRSQPSEPSEQYLTK 694

Query: 497 FVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQ 542
              P+  P  VQ + + P       + W  +K  Q NG  + YK+ ++
Sbjct: 695 SANPDENPSNVQGIGSEP---DNLVITWESLKGFQSNGPGLQYKVSWR 739



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 167/671 (24%), Positives = 265/671 (39%), Gaps = 91/671 (13%)

Query: 59  GTPLPQTIWSKDGVPINP-SDRISQGNYGKSLIIKHVEFSD-QGSYTC--EVSNGVGEAK 114
           G P P   W  +     P S+R+SQG  G  L   +V+  D +  Y C    ++     +
Sbjct: 143 GLPPPIIFWMDNAFQRLPQSERVSQGLNG-DLYFSNVQPEDTREDYICYARFNHTQTIQQ 201

Query: 115 SYSIDLSVLAAPYFTVEPEFI--------NAAEEE--TVTFECKASGLPEPEIHWVHNGK 164
              I + V +    T  P  +        N  E     +  EC A+GLP P I W+  G 
Sbjct: 202 KQPISVKVFSTKPVTERPPVLLTPMGSTSNKVELRGNVLLLECIAAGLPTPVIRWIKEGG 261

Query: 165 PISQAPPNPRRKVGPNRITIENLRKS---------DTGNYGCNATNSLGYVYKDVYVNVL 215
            +             NR   EN +K+         D+GNY C A N+LG  +  + V V 
Sbjct: 262 ELPA-----------NRTFFENFKKTLKIIDVSEADSGNYKCTARNTLGSTHHVISVTVK 310

Query: 216 AHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD---L 272
           A AP    AP++     G+   L CR  G PKP ++W+ N   +           D   +
Sbjct: 311 A-APYWITAPRNLVLSPGEDGTLICRANGNPKPSISWLTNGVPIAIAPEDPSRKVDGDTI 369

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED--YEVEAGQSATFRCN 330
             + V    S  Y C A N+ G    +  + V         P +  Y+V A   A   C 
Sbjct: 370 IFSAVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPANKLYQVIADSPALIDCA 429

Query: 331 AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
               P  K  I W RG +         +V  ++ +L +  + +  +G YTC A+ +L   
Sbjct: 430 YFGSP--KPEIEWFRGVKGSILRGN-EYVFHDNGTLEIPVAQKDSTGTYTCVARNKLGKT 486

Query: 391 EAQATLTVQVP---LEAPSNFTLIQVIDAK-KAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
           + +  L V+ P   ++ P    + +   A  + V+  +P    ++           W + 
Sbjct: 487 QNEVQLEVKDPTMIIKQPQYKVIQRSAQASFECVIKHDPTLIPTV----------IWLKD 536

Query: 447 DGE---------GSIRELIVN---KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
           + E         G     I+N   K + T T +      S + + VL    A   PP+  
Sbjct: 537 NNELPDDERFLVGKDNLTIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVVAA---PPTPA 593

Query: 495 ISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQS-VKGTKVGPLL 553
           I +  P         LE       +  L WV  E+ N  +  + I+Y+  +    V    
Sbjct: 594 IIYARP----NPPLDLELTGQLERSIELSWVPGEENNSPITNFVIEYEDGLHEPGVWHYQ 649

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES----KYLFYV--PFKNPDN 607
             +P     TT   KL+   P   Y   +    + G    S    +YL     P +NP N
Sbjct: 650 TEVP--GSQTTVQLKLS---PYVNYSFRVIAVNEIGRSQPSEPSEQYLTKSANPDENPSN 704

Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667
           V+G GS P+NLVI+W ++   + N P  +Y++ WR+ +  + W    V+    S+ +++ 
Sbjct: 705 VQGIGSEPDNLVITWESLKGFQSNGPGLQYKVSWRQKDVDDEWTS--VVVANVSKYIVSG 762

Query: 668 QPTFQPYEIKV 678
            PTF PYEIKV
Sbjct: 763 TPTFVPYEIKV 773



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 140/591 (23%), Positives = 240/591 (40%), Gaps = 79/591 (13%)

Query: 55  CIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
           C + G+P P+  W +   G  +  ++ +   N   +L I   +    G+YTC   N +G+
Sbjct: 428 CAYFGSPKPEIEWFRGVKGSILRGNEYVFHDN--GTLEIPVAQKDSTGTYTCVARNKLGK 485

Query: 113 AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPE--PEIHWVHNGKPISQAP 170
            ++  + L V        +P++         +FEC     P   P + W+ +    ++ P
Sbjct: 486 TQN-EVQLEVKDPTMIIKQPQYKVIQRSAQASFECVIKHDPTLIPTVIWLKDN---NELP 541

Query: 171 PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP----------- 219
            + R  VG + +TI N+   D G Y C    +L  V     + V+A  P           
Sbjct: 542 DDERFLVGKDNLTIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVVAAPPTPAIIYARPNP 601

Query: 220 --------------EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
                         E++  P +E        V+     G  +P V W H Q E+ G + T
Sbjct: 602 PLDLELTGQLERSIELSWVPGEENNSPITNFVIEYE-DGLHEPGV-W-HYQTEVPGSQTT 658

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGS--------GSLTVKEHTH----ITDQ 313
           +     LK++      +  +   A N++G +Q S         S    E+      I  +
Sbjct: 659 V----QLKLSPYV---NYSFRVIAVNEIGRSQPSEPSEQYLTKSANPDENPSNVQGIGSE 711

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P++  +       F+ N    P L+  + W +     ++ S    V +N     V+ +  
Sbjct: 712 PDNLVITWESLKGFQSNG---PGLQYKVSWRQKDVDDEWTS---VVVANVSKYIVSGTPT 765

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQ 429
               +   +A  +L +    + +       +P+ AP N   + VI++  A V W+PV  +
Sbjct: 766 FVPYEIKVQALNDLGYAPEPSEVIGHSGEDLPMVAPGNVQ-VHVINSTLAKVHWDPVPLK 824

Query: 430 SLRGHFRGYKVQTW-----TEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN 484
           S+RGH +GYKV  W     + +      ++++  +G  T   +    P S     V   N
Sbjct: 825 SVRGHLQGYKVYYWKVQSLSRRSKRHVEKKILTFRGNKTFGMLPGLEPYSSYKLNVRVVN 884

Query: 485 GAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
           G   GP S    F TPEGVP     L+       +  L+W  P  PNGVL  Y +K+Q +
Sbjct: 885 GKGEGPASPDKVFKTPEGVPSPPSFLKITNPTLDSLTLEWGSPTHPNGVLTSYILKFQPI 944

Query: 545 KGT-KVGPLLE-RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
             T ++GPL+E R+P       +S  L  L  ST+Y+ +    T  G G++
Sbjct: 945 NNTHELGPLVEIRIPA----NESSLILKNLNYSTRYKFYFNAQTSVGSGSQ 991



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 147/614 (23%), Positives = 222/614 (36%), Gaps = 77/614 (12%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P   W  +GVPI     +PS ++     G ++I   V+      Y C  S
Sbjct: 332 LICRANGNPKPSISWLTNGVPIAIAPEDPSRKVD----GDTIIFSAVQERSSAVYQCNAS 387

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P  +      +     +C   G P+PEI W   G  
Sbjct: 388 NEYGYLLANAF-VNVLAEPPRILTPANKLYQVIADSPALIDCAYFGSPKPEIEWFR-GVK 445

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
            S    N         + I   +K  TG Y C A N LG    +V + V      I + P
Sbjct: 446 GSILRGNEYVFHDNGTLEIPVAQKDSTGTYTCVARNKLGKTQNEVQLEV-KDPTMIIKQP 504

Query: 226 KDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRYTILETGDLKITDVAFADSG 283
           + +           C +   P   P V W+ +  EL      ++   +L I +V   D G
Sbjct: 505 QYKVIQRSAQASFECVIKHDPTLIPTVIWLKDNNELPDDERFLVGKDNLTIMNVTDKDDG 564

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVW 343
            YTC     L +   S  LTV     +   P    + A  +              + + W
Sbjct: 565 TYTCIVNTTLDSVSASAVLTV-----VAAPPTPAIIYARPNPPLDLELTGQLERSIELSW 619

Query: 344 LRGSE---PI--------DFESEP------------------RFVQSNDYSLTVTKSSEL 374
           + G E   PI        D   EP                  +     +YS  V   +E+
Sbjct: 620 VPGEENNSPITNFVIEYEDGLHEPGVWHYQTEVPGSQTTVQLKLSPYVNYSFRVIAVNEI 679

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
              Q    ++    ++   A      P E PSN   I   +    V++W  +      G 
Sbjct: 680 GRSQ---PSEPSEQYLTKSAN-----PDENPSNVQGIGS-EPDNLVITWESLKGFQSNGP 730

Query: 435 FRGYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNG-AYNGPPS 492
              YKV +W +KD +     ++V N  +   +    FVP      +V A N   Y   PS
Sbjct: 731 GLQYKV-SWRQKDVDDEWTSVVVANVSKYIVSGTPTFVPYE---IKVQALNDLGYAPEPS 786

Query: 493 EIISFV---TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-- 547
           E+I       P   PG VQ +  I    +  +   V  +   G L GYK+ Y  V+    
Sbjct: 787 EVIGHSGEDLPMVAPGNVQ-VHVINSTLAKVHWDPVPLKSVRGHLQGYKVYYWKVQSLSR 845

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDN 607
           +    +E+         T   L GLEP + Y++++      G+G  S       FK P  
Sbjct: 846 RSKRHVEKKILTFRGNKTFGMLPGLEPYSSYKLNVRVVNGKGEGPASPDKV---FKTP-- 900

Query: 608 VEGRGSTPNNLVIS 621
            EG  S P+ L I+
Sbjct: 901 -EGVPSPPSFLKIT 913



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 122/296 (41%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS---QAPPNPRRKVGPNRITIENLRKSDT--GNY 195
           E +  +C+A G P P   W  NG        A    +   G   + I N  K++   G Y
Sbjct: 33  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDAQVTMKPNSGTLVVNIMNGVKAEAYEGVY 92

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEIT-EAPKDEYTVDGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +  V   + +P  T E  +  +  +G ++VL CR   G P P + W+
Sbjct: 93  QCTARNERGAAISNNIVIRPSRSPLWTKEKLEPNHVREGDSLVLNCRPPVGLPPPIIFWM 152

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVKEHTH 309
            N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK  + 
Sbjct: 153 DNAFQRLPQSERVSQGLNGDLYFSNVQPEDTREDYICYARFNHTQTIQQKQPISVKVFST 212

Query: 310 --ITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             +T++P       G ++             C A   P+    I W++  E  +  +   
Sbjct: 213 KPVTERPPVLLTPMGSTSNKVELRGNVLLLECIAAGLPT--PVIRWIK--EGGELPANRT 268

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
           F ++   +L +   SE DSG Y C A+  L       ++TV+     + AP N  L
Sbjct: 269 FFENFKKTLKIIDVSEADSGNYKCTARNTLGSTHHVISVTVKAAPYWITAPRNLVL 324


>gi|355560430|gb|EHH17116.1| Protein sidekick-1, partial [Macaca mulatta]
          Length = 2035

 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 190/625 (30%), Positives = 272/625 (43%), Gaps = 44/625 (7%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
           + V   + +  L CI    P+      W ++GV      RI+ G  ++G+ L I +   +
Sbjct: 204 RSVVAGSSETTLECIASARPVEDLSVTWKRNGV------RITSGLHSFGRRLTISNPTSA 257

Query: 98  DQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPE 154
           D G Y CE +      E       L +   PYFT EPE  I+A  EETV   C+A G+P 
Sbjct: 258 DTGLYVCEAALLGSAFEPARAKAFLFITEPPYFTAEPESRISAEVEETVDIRCQAMGVPL 317

Query: 155 PEIHWVHNGKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P + W  +   IS+   NPR KV     + I+ LR  D+G + C A+N  G +    Y++
Sbjct: 318 PTLQWYKDAISISRLQ-NPRYKVLASGGLRIQKLRPEDSGIFQCFASNEGGEIQTHTYLD 376

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V   AP  T+ P D    DG T +L C V GAPKP + W      L  G     R+ +LE
Sbjct: 377 VTNIAPVFTQRPADTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLE 436

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L+I  V   D+G YTC+A N  G+   S +LTV   T I   PED+ V  G  AT  
Sbjct: 437 SGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNRTSIVHPPEDHVVIKGTMATLH 496

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A  DP + L  VW + +  +   S  R V   D SL ++++   D G YTC   +E  
Sbjct: 497 CGATHDPRVSLRYVWKKDNVALTPSSTSRIVVEKDGSLLISQTWSGDIGDYTCEIVSEGG 556

Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV-SWNPVSPQSLRGHFRGYKVQTWTEKD 447
                A L V     +P N           AVV SW  V P         Y V+  +E +
Sbjct: 557 NDSRMARLEVIELPHSPQNLLASPNSSHSHAVVLSW--VRPFDGNSPILYYIVEL-SENN 613

Query: 448 GEGSIRELIVNKG-ESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEG 502
               +   + N G E T   V    PA     RV A N    G Y+   S ++    P  
Sbjct: 614 SPWKVH--LSNVGPEMTGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPS 671

Query: 503 VPGTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560
            P   +++ A    + +  ++W  P +   NGVL GY ++Y+ + G   G   +R   I+
Sbjct: 672 APP--KNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYR-LAGLP-GEYQQR--NIT 725

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEGRGSTP 615
            P      +  L   T+Y I +A Y  AG G  S+      L  VP   P NV+      
Sbjct: 726 SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNS 785

Query: 616 NNLVISWTAMPEIEHNAPHFKYRIF 640
             +   W   P+   N  +  Y++ 
Sbjct: 786 TTIQFLWNPPPQQFINGINQGYKLL 810



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 176/668 (26%), Positives = 265/668 (39%), Gaps = 91/668 (13%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN-GVGEAK-SYSI 118
           P PQ  W ++G  I PS+RI+       L+I     SD G+Y  +  N   GE K S  I
Sbjct: 121 PRPQVTWFREGHKIIPSNRIAI-TLENQLVILATTASDAGAYYVQAVNEKNGENKTSPFI 179

Query: 119 DLSV--------LAAPYFTVEP--EFINAAEEETVTFECKASGLP--EPEIHWVHNGKPI 166
            LS+          AP   V P    + A   ET T EC AS  P  +  + W  NG  I
Sbjct: 180 HLSIARDIGTPETTAPTIVVPPGNRSVVAGSSET-TLECIASARPVEDLSVTWKRNGVRI 238

Query: 167 SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV---LAHAPEITE 223
           +    +  R     R+TI N   +DTG Y C A   LG  ++         +   P  T 
Sbjct: 239 TSGLHSFGR-----RLTISNPTSADTGLYVCEAA-LLGSAFEPARAKAFLFITEPPYFTA 292

Query: 224 APKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITDVAF 279
            P+   + +  +TV + C+  G P P + W  +      L   RY +L +G L+I  +  
Sbjct: 293 EPESRISAEVEETVDIRCQAMGVPLPTLQWYKDAISISRLQNPRYKVLASGGLRIQKLRP 352

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHI-TDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            DSG + CFA N+ G  Q    L V     + T +P D  V  G +A  RC     P  K
Sbjct: 353 EDSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRPADTTVTDGMTAILRCEVSGAP--K 410

Query: 339 LSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            +I W R +  +   S   PRF+      L +      D+G YTC A      + A ATL
Sbjct: 411 PAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATL 470

Query: 397 TV---QVPLEAPSNFTLIQ-VIDAKKAVVSWNPVSPQSLRGHFRGYKV--------QTWT 444
           TV      +  P +  +I+  +       + +P    SLR  ++   V        +   
Sbjct: 471 TVWNRTSIVHPPEDHVVIKGTMATLHCGATHDPRV--SLRYVWKKDNVALTPSSTSRIVV 528

Query: 445 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVP 504
           EKDG   I +         T E+   V    N +R+            E+I        P
Sbjct: 529 EKDGSLLISQTWSGDIGDYTCEI---VSEGGNDSRMARL---------EVIEL------P 570

Query: 505 GTVQSLEAIPLG--SSAFYLKWVKPEQPNGVLMGYKIKYQ------SVKGTKVGPLLERL 556
            + Q+L A P    S A  L WV+P   N  ++ Y ++         V  + VGP +   
Sbjct: 571 HSPQNLLASPNSSHSHAVVLSWVRPFDGNSPILYYIVELSENNSPWKVHLSNVGPEM--- 627

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG---AESKYLFY---VPFKNPDNVEG 610
                   T   ++GL P+  Y+  +    + G G   AE+  L      P   P N+  
Sbjct: 628 --------TGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVA 679

Query: 611 RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT 670
            G T  ++++ W   PE EHN     Y + +R       + Q ++     +  ++ +   
Sbjct: 680 SGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNITSPEVNYCLVTDLII 739

Query: 671 FQPYEIKV 678
           +  YEI+V
Sbjct: 740 WTQYEIQV 747



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 101/240 (42%), Gaps = 23/240 (9%)

Query: 389 FIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
           F  A    T+Q VP   P N    + +++      WNP   Q + G  +GYK+  W    
Sbjct: 758 FSRAVTEYTLQGVPTAPPQNVQ-TEAVNSTTIQFLWNPPPQQFINGINQGYKLLAWPADA 816

Query: 448 GEGSIRELI------VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
            E      I      V+ G    T + KF   +  F  VL F    +GPPS      T E
Sbjct: 817 PEAVTVVTIAPDFHGVHHGH--ITNLKKF---TAYFTSVLCFTTPGDGPPSTPQLVWTHE 871

Query: 502 GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
             PG V  L    +  ++  + W +P + NG++ GY+I ++ V G        RL +  +
Sbjct: 872 DKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQISWE-VYGRNDS----RLTHTLN 926

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVIS 621
            TT   K+ GL   T Y I +A  T  G G  +     +    P ++ G    P+NLVIS
Sbjct: 927 STTHEYKIQGLSSLTTYTIDVAALTAVGAGLLTSST--ISSGVPPDLPG---APSNLVIS 981



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 87/375 (23%), Positives = 138/375 (36%), Gaps = 32/375 (8%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           ++ L   ++ L C+  G+   +  W +DG  +      S+  Y    II  ++  D G Y
Sbjct: 16  QIHLEGNRLVLTCLAEGSWPLEFKWMRDGRELTTYS--SEYKY----IIPSLQKLDAGFY 69

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFE-CKASGLPEPEIHWVH 161
            C V N +G       ++ V     FT   +     +           +  P P++ W  
Sbjct: 70  RCVVRNRMGALLQRKSEVQVAYMGSFTDTDQRKTVPQGRAAILNLLPITSYPRPQVTWFR 129

Query: 162 NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLG-------YVYKDVYVNV 214
            G  I   P N       N++ I     SD G Y   A N          +++  +  ++
Sbjct: 130 EGHKI--IPSNRIAITLENQLVILATTASDAGAYYVQAVNEKNGENKTSPFIHLSIARDI 187

Query: 215 ---LAHAPEITEAPKDEYTVDGKT-VVLTCRVFGAPKPE--VNWIHNQKELTGGRYTILE 268
                 AP I   P +   V G +   L C     P  +  V W  N   +T G ++   
Sbjct: 188 GTPETTAPTIVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGVRITSGLHSFGR 247

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGT----AQGSGSLTVKEHTHITDQPED-YEVEAGQ 323
              L I++   AD+G Y C A   LG+    A+    L + E  + T +PE     E  +
Sbjct: 248 --RLTISNPTSADTGLYVCEA-ALLGSAFEPARAKAFLFITEPPYFTAEPESRISAEVEE 304

Query: 324 SATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +   RC A+  P   L   W + +  I     PR+       L + K    DSG + C A
Sbjct: 305 TVDIRCQAMGVPLPTLQ--WYKDAISISRLQNPRYKVLASGGLRIQKLRPEDSGIFQCFA 362

Query: 384 QTELDFIEAQATLTV 398
             E   I+    L V
Sbjct: 363 SNEGGEIQTHTYLDV 377



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 103/275 (37%), Gaps = 29/275 (10%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           APYF  EP       E   +   C A G    E  W+ +G+ ++             +  
Sbjct: 5   APYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMRDGRELTTYSSE-------YKYI 57

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR-V 242
           I +L+K D G Y C   N +G + +      +A+    T+  + +    G+  +L    +
Sbjct: 58  IPSLQKLDAGFYRCVVRNRMGALLQRKSEVQVAYMGSFTDTDQRKTVPQGRAAILNLLPI 117

Query: 243 FGAPKPEVNWIH-NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNK--------- 292
              P+P+V W     K +   R  I     L I     +D+G Y   A N+         
Sbjct: 118 TSYPRPQVTWFREGHKIIPSNRIAITLENQLVILATTASDAGAYYVQAVNEKNGENKTSP 177

Query: 293 ---LGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSE 348
              L  A+  G+      T I   P +  V AG S  T  C A + P   LS+ W R   
Sbjct: 178 FIHLSIARDIGTPETTAPT-IVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGV 236

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            I        + S    LT++  +  D+G Y C A
Sbjct: 237 RIT-----SGLHSFGRRLTISNPTSADTGLYVCEA 266



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 2/142 (1%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP N   +  + A +  V+W+P  P+S  G+ +GYK+  W E D +    ++ V   
Sbjct: 1603 PAMAPQNVQ-VTPLTASQLEVTWDPPPPESQNGNIQGYKIYYW-EADSQNDTEKMKVLFL 1660

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
                  +      ++    + AFN A +GP S+     T +  PG    L    + S+  
Sbjct: 1661 PEPVVRLKNLTSHTEYLVSISAFNAAGDGPRSDPRQGRTHQAAPGAPSFLAFSEITSTTL 1720

Query: 521  YLKWVKPEQPNGVLMGYKIKYQ 542
             + W +P   NG+L GY++ Y+
Sbjct: 1721 NVSWGEPAAANGILQGYRVVYE 1742



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 10/207 (4%)

Query: 397  TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIRE 454
            T+Q P +       ++        + W P+      G+    GY+++ W       ++ +
Sbjct: 1070 TLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRSDLQSSALAQ 1129

Query: 455  LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEAI 513
            ++ ++ E   T +++     +   ++ AFN    GP SE++   T E VP    +++ A 
Sbjct: 1130 VVSDRLEREFT-IEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRESVPSAAPENVSAE 1188

Query: 514  PLGSSAFYLKWVK-PEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAG 571
             + S+   L W   PEQ  NG+++GYKI +++ K     P   R   +    T SA LAG
Sbjct: 1189 AVSSTQILLTWASVPEQDQNGLILGYKILFRA-KDLDPEP---RSHTVRGNYTQSALLAG 1244

Query: 572  LEPSTKYRIHLAGYTKAGDGAESKYLF 598
            L     Y + +  +T+ G+G  S  L 
Sbjct: 1245 LRKFVLYELQVLAFTRIGNGVPSTPLI 1271



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 94/229 (41%), Gaps = 30/229 (13%)

Query: 391  EAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV--QTWTEKD 447
            E +A  T+Q VP E P + +      +   ++ W P   +SL G  +GY++  +    + 
Sbjct: 1469 ETEAVTTLQDVPGEPPGSVSATPHTTSS-VLIQWQPPRDESLNGLLQGYRIYYRELEYEA 1527

Query: 448  GEG----SIRELIVNKGESTTTEVDKFVPAS-----------KNFARVLAFNGAYN---- 488
            G G    +++  I  + E T     K V +S           K + R      AYN    
Sbjct: 1528 GSGTEAKTLKSPIALRAELTAQSSFKTVNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGE 1587

Query: 489  GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
             P S  +     E  P    Q+++  PL +S   + W    PE  NG + GYKI Y    
Sbjct: 1588 SPASAPVEVFVGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEAD 1647

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
                   ++ L ++ +P     +L  L   T+Y + ++ +  AGDG  S
Sbjct: 1648 SQNDTEKMKVL-FLPEPV---VRLKNLTSHTEYLVSISAFNAAGDGPRS 1692



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 11/148 (7%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V  Q   G   GYK+  +  KD +   R   V +
Sbjct: 1177 VPSAAPENVS-AEAVSSTQILLTWASVPEQDQNGLILGYKI-LFRAKDLDPEPRSHTV-R 1233

Query: 460  GESTTTEV----DKFVPASKNFARVLAFNGAYNGPPSE-IISFVTPEGVPGTVQSLEAIP 514
            G  T + +     KFV       +VLAF    NG PS  +I   T +  PG    L    
Sbjct: 1234 GNYTQSALLAGLRKFVLYE---LQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPE 1290

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
            +  ++  + W  PE+PNG+++GY+I Y+
Sbjct: 1291 VRLTSVRIVWQPPEEPNGIILGYQIAYR 1318



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 35/239 (14%)

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFVTPEGVPGTVQ-SLEAIPLGSS 518
            E+T   VD+  P +    R+ A N   +    SE  +  T + VPG    S+ A P  +S
Sbjct: 1436 EATACIVDRLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTS 1495

Query: 519  AFYLKWVKP--EQPNGVLMGYKIKYQSVK-----GTKV----GPLLERLPYI-------- 559
            +  ++W  P  E  NG+L GY+I Y+ ++     GT+      P+  R            
Sbjct: 1496 SVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKSPIALRAELTAQSSFKTV 1555

Query: 560  -SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYV----PFKNPDNVEGRGS 613
             S  T+T  +L  L+   +Y + +  Y   G+  A +    +V    P   P NV+    
Sbjct: 1556 NSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTPL 1615

Query: 614  TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
            T + L ++W   P    N     Y+I++        W  D   D  + +++   +P  +
Sbjct: 1616 TASQLEVTWDPPPPESQNGNIQGYKIYY--------WEADSQNDTEKMKVLFLPEPVVR 1666



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 65/166 (39%), Gaps = 8/166 (4%)

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
           TE    +  ++G  +VLTC   G+   E  W+ + +ELT    T        I  +   D
Sbjct: 10  TEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMRDGRELT----TYSSEYKYIIPSLQKLD 65

Query: 282 SGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           +G Y C  RN++G   Q    + V      TD  +   V  G++A      ++    +  
Sbjct: 66  AGFYRCVVRNRMGALLQRKSEVQVAYMGSFTDTDQRKTVPQGRAAILNLLPITS-YPRPQ 124

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + W R    I   +       N   +  T +S  D+G Y  +A  E
Sbjct: 125 VTWFREGHKIIPSNRIAITLENQLVILATTAS--DAGAYYVQAVNE 168


>gi|432924655|ref|XP_004080662.1| PREDICTED: protein sidekick-2-like [Oryzias latipes]
          Length = 2260

 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 176/579 (30%), Positives = 261/579 (45%), Gaps = 36/579 (6%)

Query: 67  WSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSID--LSVLA 124
           W K+GV ++        +Y + L I     SD G Y CE         S S    L VL 
Sbjct: 320 WRKNGVLVSSG----LSDYNRRLTILSPVVSDAGYYECEAVLRSSSVPSVSAGAYLHVLE 375

Query: 125 APYFTVEPE-FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAP-PNPRRKVGPNRI 182
            P F  EP+  I A  E+ V   C+A G+P+P+I W  +  PI     P  R  VG   +
Sbjct: 376 PPQFIKEPDKHITAEMEKVVDIPCQARGVPQPDIVWYKDALPIDPVKTPRYRVLVG-GSL 434

Query: 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRV 242
            +  L   DTG + C A N  G V  + Y+ V + AP IT  P D   +DG +V+L C  
Sbjct: 435 QVNGLLPDDTGMFQCFARNMAGEVQTNTYLAVTSIAPNITAGPSDSTVIDGMSVILHCET 494

Query: 243 FGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQ 297
            GAP+P + W   ++ L  G     R+T+LE+G L I+    +D+G YTC A N  G  +
Sbjct: 495 SGAPRPAITWQKGERVLASGSVQLPRFTLLESGSLLISPSHISDAGTYTCMASNSRGIDE 554

Query: 298 GSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
            S  L V   T IT  P+D  V  G  A   C    DPS+ +  VW +    I+ +S PR
Sbjct: 555 ASADLIVWARTRITTPPQDLSVIKGTKAVMTCGVTHDPSVIIRHVWEKDGSVINVQSVPR 614

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAK 417
              S D +L ++++   D G YTCR  +        A L V+    AP N T +     K
Sbjct: 615 MQLSADGTLHISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQLPHAPENPTAVLSKSEK 674

Query: 418 KAV-VSWNPVSPQSLRGH--FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
           +A+ ++W     +S  G+     Y ++  +E +   +I +  + + EST   V+  +PA 
Sbjct: 675 RAIDLAWA----KSFDGNSPLIRYILEV-SENNAPWAILQANI-EPESTAVTVNGLIPAR 728

Query: 475 KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSS--AFYLKWVKPEQP-- 530
               R+ A N    G  S+    V+    P +      I  G +  +  ++W  P++   
Sbjct: 729 SYQFRLCAVNDVGKGQFSKETERVSLPEEPPSASPQNVITSGRTNQSIMIQWQPPQESHQ 788

Query: 531 NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGD 590
           NG+L GY ++Y+ + G    P+  ++  IS P  T+  L  L   T Y I +A Y  AG 
Sbjct: 789 NGILRGYIVRYR-LTGL---PVDYQIKNISSPDVTTLLLEDLIIWTNYEIEVAAYNGAGL 844

Query: 591 GAESK-----YLFYVPFKNPDNVEGRGSTPNNLVISWTA 624
           G  S       L  VP   P NV+        +  +W A
Sbjct: 845 GVFSHKVTEWTLQGVPTIAPGNVKAEAVNSTAIRFTWNA 883



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 141/585 (24%), Positives = 225/585 (38%), Gaps = 64/585 (10%)

Query: 51   VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEV 106
            V L C   G P P   W K G  +  S  +    +      SL+I     SD G+YTC  
Sbjct: 488  VILHCETSGAPRPAITWQK-GERVLASGSVQLPRFTLLESGSLLISPSHISDAGTYTCMA 546

Query: 107  SN--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--WVHN 162
            SN  G+ EA   S DL V A    T  P+ ++  +       C  +  P   I   W  +
Sbjct: 547  SNSRGIDEA---SADLIVWARTRITTPPQDLSVIKGTKAVMTCGVTHDPSVIIRHVWEKD 603

Query: 163  GKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAP 219
            G  I+     PR ++  +  + I      D G Y C  T+  G   +  ++ V  L HAP
Sbjct: 604  GSVIN-VQSVPRMQLSADGTLHISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQLPHAP 662

Query: 220  EITEA---PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL------ETG 270
            E   A     ++  +D    +   + F    P + +I    E     + IL      E+ 
Sbjct: 663  ENPTAVLSKSEKRAID----LAWAKSFDGNSPLIRYILEVSE-NNAPWAILQANIEPEST 717

Query: 271  DLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYE----VEAGQSAT 326
             + +  +  A S ++   A N +G  Q S      E   + ++P        + +G++  
Sbjct: 718  AVTVNGLIPARSYQFRLCAVNDVGKGQFSKE---TERVSLPEEPPSASPQNVITSGRTNQ 774

Query: 327  FRCNAVSDPSLKLSIVWLRG--------SEPIDFE----SEPRFVQSNDYSLTVTKSSEL 374
                    P        LRG          P+D++    S P         L +  + E+
Sbjct: 775  SIMIQWQPPQESHQNGILRGYIVRYRLTGLPVDYQIKNISSPDVTTLLLEDLIIWTNYEI 834

Query: 375  DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
            +   Y             + TL   VP  AP N    + +++     +WN  +PQ + G 
Sbjct: 835  EVAAYNGAGLGVFSHKVTEWTLQ-GVPTIAPGNVK-AEAVNSTAIRFTWNAPNPQFINGI 892

Query: 435  FRGYKVQTWTE-KDGEGSIRELIVNKGEST----TTEVDKFVPASKNFARVLAFNGAYNG 489
             +GYK+  W   KD E ++  +  N  +S      T + KF   ++ +  VL F    +G
Sbjct: 893  NQGYKLLAWEPGKDEEVAMVTVRPNFQDSVHVGYVTGLKKF---TEYYTSVLCFTTPGDG 949

Query: 490  PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
            P S   +  T E  PG V  L    +  ++  + W +P + NGVL GY+I ++    T  
Sbjct: 950  PRSPPRAVRTHEDTPGAVGHLSFTEILDTSLKVSWSEPNEKNGVLTGYRISWEEFNRTNT 1009

Query: 550  GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
                 R+ +     T   ++ GL   T Y I +AG T  G G  S
Sbjct: 1010 -----RVTHYLPNVTLEYRVTGLTALTTYTIEVAGMTSKGQGLLS 1049



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 125/300 (41%), Gaps = 47/300 (15%)

Query: 379  YTCRAQTELDFIEAQATLTVQVPLEA---PSNFTLI--QVIDAKKAVVSWNP----VSPQ 429
            +   AQT   + EA   L V     A   P++  L+  + + A++ ++SW P    +SP 
Sbjct: 1442 FRITAQTRKGWGEAAEALVVTTEKRARPQPTSRPLVPQKHVQARQVLLSWEPGSDGLSP- 1500

Query: 430  SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
                  R Y VQ     D   ++    VN  E+ +  V +  P +    R+ A N   + 
Sbjct: 1501 -----VRYYTVQLRELPDKNWTVHSASVNH-EAASYIVSRLKPFTSYQFRIKATNDIGDS 1554

Query: 490  PPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQ 542
              SE    +T     P+  P     L   P  +++  ++W  P  E+ NG+L+G++I Y+
Sbjct: 1555 EYSEESEAITTLQDAPDEAPVI---LSVTPHTTTSVLIRWKPPSEEKINGILLGFRIHYR 1611

Query: 543  SVKGTKVGPLLERL-----------PY----ISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
             +   ++   +  +           PY    +SD T T  +L  L    +Y I ++ Y  
Sbjct: 1612 ELLYDRLRNYIHTVNSAFTWADLTAPYSVRNLSDSTLTHYELDKLSKHKRYEIRMSVYNA 1671

Query: 588  AGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI-FW 641
             G+G  S  + +F    VP   P NV  + +T   L ++W   P    N     Y+I FW
Sbjct: 1672 VGEGPTSPPQEVFVGEAVPTAPPQNVAIQSATATQLDVTWDPPPVNAQNGDIQGYKIYFW 1731



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 22/181 (12%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW--TEKDGEGSIRELIV 457
            VP   P N   IQ   A +  V+W+P    +  G  +GYK+  W    K+G   +R L +
Sbjct: 1689 VPTAPPQNVA-IQSATATQLDVTWDPPPVNAQNGDIQGYKIYFWEFQRKNGTERLRTLFM 1747

Query: 458  NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS 517
             +      ++      +     V AFN A +GP S      T +  P     +    L +
Sbjct: 1748 PEA---GVKLKNLTGYTNYMISVAAFNAAGDGPRSSPTRGRTQQAAPSAPSFIHFSELTT 1804

Query: 518  SAFYLKWVKPEQPNGVLMGYKIKYQ--------------SVKGTKVGPLLERLPYISDPT 563
            ++  + W +P  PNG++ GY++ Y+               VKG+  GPL  +L  ++D  
Sbjct: 1805 TSVNVSWGEPTFPNGIIEGYRLIYEPLTPVEGVSKTVTVDVKGS--GPLWLKLRDLADGV 1862

Query: 564  T 564
            T
Sbjct: 1863 T 1863



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N +      +   +V W  V      G   GYKV  + EKD E +     V  
Sbjct: 1267 VPSSGPTNVSAFATTSSS-ILVRWMEVLEPDRNGLILGYKV-VYKEKDSEKAAHFWTVEG 1324

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              + + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1325 NATHSVQLSSLGKYVLYEIQVLAFTRIGDGRPSSPPILERTLDDVPGPPVGILFPEVRTT 1384

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P QPNG+++ Y+I Y           +  L    +P+     +  L+P + Y
Sbjct: 1385 SVRLIWQSPSQPNGIILAYQITYYLNSSNSNTATVNVL----NPSARQYTVTSLKPESVY 1440

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1441 VFRITAQTRKGWGEAAEAL 1459



 Score = 47.0 bits (110), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 105/288 (36%), Gaps = 46/288 (15%)

Query: 126 PYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
           PYF  EP       E   +   C A G    E  W+HN   ++       R     R  I
Sbjct: 84  PYFKTEPVRSQLHLERNRLVLTCMAEGSWPLEFKWIHNNTELT-------RFSLEYRYLI 136

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVF 243
            +L +S  G Y C   N +G + +      +A      E  +++    G+  VV   R+ 
Sbjct: 137 PSLDRSHAGFYRCIVRNRVGALLQRRTEVQVAFMGSFEEGERNQSVSQGEGAVVPAPRIR 196

Query: 244 GAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSGS 301
             P+P+V W  +  ++    R  I     L I      D+G Y   A N K G  + S  
Sbjct: 197 SFPQPQVTWYKDGHKIPPTSRIAITLDNTLVILSTVAPDAGRYYVQAVNDKNGENKTSQP 256

Query: 302 LTVKEHTHI------------TDQP----------EDYEVEAGQSATFRCNAVSDPSLKL 339
           +T+   + +             D P          E   +E     +++  +V  P +KL
Sbjct: 257 ITLSVDSELPLERRLTPTQNAIDLPPSVRSVIQGQEYASLEKYVQKSYQYISVYRPLIKL 316

Query: 340 SIVWLRGSEPIDFESEPRFVQS--NDYS--LTVTKSSELDSGQYTCRA 383
           SI W +             V S  +DY+  LT+      D+G Y C A
Sbjct: 317 SISWRKNGV---------LVSSGLSDYNRRLTILSPVVSDAGYYECEA 355



 Score = 39.7 bits (91), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 56/253 (22%), Positives = 104/253 (41%), Gaps = 21/253 (8%)

Query: 452  IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGT 506
            I   + N+ E+   EV    P +    R+   N     PPS+    +      P+  P  
Sbjct: 1112 IVHQVSNEPEARALEVPNLNPYTLYRFRMRQVNIVGTSPPSQPSRKIQTLPAPPDIAPAN 1171

Query: 507  VQSLEAIPLGSSAFYLKWVK-PE---QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
            V    A     ++ +L+W+  PE     N   +GY+I+Y  V G++   L+     I+D 
Sbjct: 1172 VTLRTA---SETSLWLRWMPLPEWEYNGNAEQVGYRIQYYRV-GSQGHGLIH---VIADR 1224

Query: 563  TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNN 617
                  +  LE  T+Y + +      G G  S+ +       VP   P NV    +T ++
Sbjct: 1225 LEREFTIEDLEEWTEYEVRVQAVNHMGVGPWSQPVRGRTRESVPSSGPTNVSAFATTSSS 1284

Query: 618  LVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIK 677
            +++ W  + E + N     Y++ ++  ++ +A +   V       + L++   +  YEI+
Sbjct: 1285 ILVRWMEVLEPDRNGLILGYKVVYKEKDSEKAAHFWTVEGNATHSVQLSSLGKYVLYEIQ 1344

Query: 678  VVQTWTEKDGEGS 690
            V+      DG  S
Sbjct: 1345 VLAFTRIGDGRPS 1357


>gi|410925447|ref|XP_003976192.1| PREDICTED: neurofascin-like [Takifugu rubripes]
          Length = 1510

 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/391 (31%), Positives = 202/391 (51%), Gaps = 11/391 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           ++  ++ LR +++ L CI  G P P   W + G  + P  ++   N+ K+L++  V   D
Sbjct: 411 SQSSKMVLRGQELLLECIAAGLPTPSIKWYRKGGDL-PERKVKFENFNKTLVVMGVSEED 469

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  +N +G  + +SI + V AAPY+  +P  +  A +E     C+A+G P+P I 
Sbjct: 470 AGEYVCMANNHLGSVR-HSILVQVKAAPYWLDKPTNLVLAPDEHGRLVCRANGNPKPNIQ 528

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+PI  +PPNP R+V  + I   +++   +  Y CNA+N  GY+  + +++VL   
Sbjct: 529 WLINGQPIETSPPNPGRQVLGDTIIFRSVQMGSSAVYQCNASNQYGYLLANAFISVLDMP 588

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +   PK++    ++     L C  FG+P P++ W  N +   + GG YT+   G L+I
Sbjct: 589 PRML-GPKNQLIKVIENTHTFLDCPFFGSPLPDLRWFKNGQGSGVDGGHYTVHNNGTLEI 647

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
                 D G YTC A N LG A+    L VKE T I   P+      G +A F+C   SD
Sbjct: 648 KRARAEDEGTYTCVANNLLGKAENQVRLEVKEATRIIGVPQHQSAVRGSTARFKCQVKSD 707

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           PSL +++ W +  +P++     R  +  D  L+++  +E D G YTC  ++E+D   A A
Sbjct: 708 PSLPVTVTWTKDDKPLNVGW--RLRKDEDL-LSISAVNEGDEGMYTCTVKSEIDADSASA 764

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LTV    + P    L     A+   ++W P
Sbjct: 765 RLTVLGCPDPPVELDLSDPA-ARSVRLTWIP 794



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 136/599 (22%), Positives = 229/599 (38%), Gaps = 84/599 (14%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG----PNRITIENLRKSDTGNYG 196
           + +  EC A+GLP P I W   G  +      P RKV        + +  + + D G Y 
Sbjct: 421 QELLLECIAAGLPTPSIKWYRKGGDL------PERKVKFENFNKTLVVMGVSEEDAGEYV 474

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A N LG V   + V V A AP   + P +      +   L CR  G PKP + W+ N 
Sbjct: 475 CMANNHLGSVRHSILVQVKA-APYWLDKPTNLVLAPDEHGRLVCRANGNPKPNIQWLING 533

Query: 257 KEL-----TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT 311
           + +       GR  + +T  +    V    S  Y C A N+ G    +  ++V +     
Sbjct: 534 QPIETSPPNPGRQVLGDT--IIFRSVQMGSSAVYQCNASNQYGYLLANAFISVLDMPPRM 591

Query: 312 DQPEDYEVEAGQSA-TF-RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
             P++  ++  ++  TF  C     P   L   W +  +    +    +   N+ +L + 
Sbjct: 592 LGPKNQLIKVIENTHTFLDCPFFGSPLPDLR--WFKNGQGSGVDGG-HYTVHNNGTLEIK 648

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAK-KAVVSWNP 425
           ++   D G YTC A   L   E Q  L V+     +  P + + ++   A+ K  V  +P
Sbjct: 649 RARAEDEGTYTCVANNLLGKAENQVRLEVKEATRIIGVPQHQSAVRGSTARFKCQVKSDP 708

Query: 426 VSPQSLRGHFRGYKVQTWTEKD-----------GEGSIRELIVNKGEST--TTEVDKFVP 472
             P ++          TWT+ D            E  +    VN+G+    T  V   + 
Sbjct: 709 SLPVTV----------TWTKDDKPLNVGWRLRKDEDLLSISAVNEGDEGMYTCTVKSEID 758

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
           A    AR+                     G P     L+     + +  L W+   +   
Sbjct: 759 ADSASARLTVL------------------GCPDPPVELDLSDPAARSVRLTWIPGNEHRS 800

Query: 533 VLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 592
            +  + ++++  +  + G       Y   P   ++ +  L P   Y+  +      G   
Sbjct: 801 PVTHFLVQFEEDRW-EPGQWRNMSSY---PGHLNSVILQLAPFVNYQFRVIAINSVGQSE 856

Query: 593 ES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
            S      K     P   P  + G GS  +N+ I+W  + ++E N  +  Y ++WRR + 
Sbjct: 857 PSTPSPQYKTSGAAPDVIPRGLRGWGSMKDNMEITWEPLLDLERNGANLIYSLWWRRKDM 916

Query: 647 GEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVN-KGESTTT 704
            E WN  +V       +V + + T+ PYEIK +Q   E  G G +  ++V   GE T T
Sbjct: 917 SEDWN--NVTTAGNKHMVHSTE-TYVPYEIK-IQAGNEF-GSGPVSNVVVGYSGEDTPT 970



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 15/200 (7%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD---GEGSIRELIV 457
            P  AP++  + +V D+ KA + W PV  +S++G F+ Y++  W +     G    +E  +
Sbjct: 969  PTTAPTDLRVSKV-DSTKAYIHWKPVDLKSVQGEFKEYRLYYWRDASLVPGLEVSKEKQI 1027

Query: 458  NKGESTTTE----VDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAI 513
                ST +E    + + +P SK    ++  N  Y GP S  + F T EGVP   +     
Sbjct: 1028 KGFYSTVSEPSSLLSELLPFSKYKMFMVVANTRYEGPASNTVEFTTKEGVPDIPRLFTIN 1087

Query: 514  PLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVG--PLLERLPYISDPTTTSAKLAG 571
                    LKW KP +PNG+L+GY++KYQ+V G++VG       LP ++D T     L  
Sbjct: 1088 WKNLDTIQLKWGKPLEPNGILIGYQLKYQTVNGSRVGRAQFETFLPNVTDFT-----LRL 1142

Query: 572  LEPSTKYRIHLAGYTKAGDG 591
             +  T+Y+  L+  T+ G G
Sbjct: 1143 PDRFTRYKFFLSAVTQVGSG 1162



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 115/300 (38%), Gaps = 38/300 (12%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE-NLRKSDT-----GN 194
           + +  EC+A G   P   W  NGK       +PR  +     T+E + R+        G 
Sbjct: 216 DNIIIECEAKGNTLPTFSWRRNGK-FFNVGKDPRVTMRKRSGTLEISFRRGGRPEDYEGE 274

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD--GKTVVLTCRVFGAPKPEVNW 252
           Y C A N LG    +  +  ++ AP   +   D   V+     ++      G P P + W
Sbjct: 275 YQCFANNELGVALSNKILLRVSKAPLWPKEVLDPVLVNEGSPLILPCNPPPGLPPPLIFW 334

Query: 253 IHNQKE--LTGGRYTILETGDLKITDVAFADS-GEYTCFARNKLG-TAQGSGSLTVKEHT 308
           + N     +   R ++   GDL  ++V   D+  EY C AR +L  T Q      +K  T
Sbjct: 335 MDNTMTPIVQDKRVSMGLNGDLYFSNVMTKDALNEYKCNARCRLTQTIQQKNPFILKVQT 394

Query: 309 H-------------ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLR--GSEPIDFE 353
                         +  Q     V  GQ     C A   P+   SI W R  G  P   E
Sbjct: 395 SRKLPQSMPTLLSPVGSQSSKM-VLRGQELLLECIAAGLPT--PSIKWYRKGGDLP---E 448

Query: 354 SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
            + +F   N  +L V   SE D+G+Y C A   L  +     + V+     L+ P+N  L
Sbjct: 449 RKVKFENFNK-TLVVMGVSEEDAGEYVCMANNHLGSVRHSILVQVKAAPYWLDKPTNLVL 507


>gi|332257801|ref|XP_003277993.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-1 [Nomascus
           leucogenys]
          Length = 2164

 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 192/630 (30%), Positives = 274/630 (43%), Gaps = 54/630 (8%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
           + V   + +  L CI    P+      W ++GV      RI+ G  ++G+ L I +   +
Sbjct: 246 RSVVAGSSETTLECIANARPVEDLSVTWKRNGV------RITSGLHSFGRRLTISNPTSA 299

Query: 98  DQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPE 154
           D G Y CE +   G  E       L ++  PYFT EPE  I+A  EETV   C+A G+P 
Sbjct: 300 DTGPYVCEAALRGGAFEPARAKAFLFIIEPPYFTAEPESRISAEVEETVDIGCQAMGVPL 359

Query: 155 PEIHWVHNGKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P + W  +   IS+   NPR KV     + I+ L   D+G + C A+N  G +    Y++
Sbjct: 360 PTLQWYKDAISISRLQ-NPRYKVLASGGLRIQKLSPEDSGIFQCFASNEGGEIQTHTYLD 418

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V   AP  T+ P D    DG T +L C V GAPKP + W      L  G     R+ +LE
Sbjct: 419 VTNIAPVFTQRPVDTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLE 478

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L+I  V   D+G YTC+A N  G+   S  LTV   T I   PED+ V  G +AT  
Sbjct: 479 SGGLQIAPVFIQDAGNYTCYAANTEGSLNASAMLTVWNRTSIIHPPEDHVVIKGTTATLH 538

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A  DP + L  VW + +  +   S  R V   D SL ++++   D G YTC   +E  
Sbjct: 539 CGATHDPRVSLRYVWKKDNVALTPSSTSRIVVEKDGSLLISQTWSGDIGDYTCEIVSEGG 598

Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV-SWNPVSPQSLRGHFRG-----YKVQT 442
                A L V     +P N           AVV SW  V P      F G     Y V  
Sbjct: 599 NDSRMARLEVIELPHSPQNLLASPKSSHSHAVVLSW--VRP------FDGNSPILYYVVE 650

Query: 443 WTEKDGEGSIRELIVNKG-ESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISF 497
            +E +    +   + N G E T   V    PA     RV A N    G Y+   S ++  
Sbjct: 651 LSENNSPWKVH--LSNVGPEMTGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLP 708

Query: 498 VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLER 555
             P   P   +++ A    + +  ++W  P +   NGVL GY ++Y+ + G   G   +R
Sbjct: 709 EEPPSAPP--KNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYR-LAGLP-GEYQQR 764

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEG 610
              I+ P      +  L   T+Y I +A Y  AG G  S+      L  VP   P NV+ 
Sbjct: 765 --NITSPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQT 822

Query: 611 RGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
                  +   W   P+   N  +  Y++ 
Sbjct: 823 EAVNSTTIQFLWNPPPQQFINGINQGYKLL 852



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 174/668 (26%), Positives = 266/668 (39%), Gaps = 91/668 (13%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN-GVGEAK-SYSI 118
           P PQ  W ++G  I PS+RI+       L+I     SD G+Y  +  N   GE K S  I
Sbjct: 163 PRPQVTWFREGHKIIPSNRIAI-TLENQLVILATTTSDSGAYYVQAVNEKNGENKTSPFI 221

Query: 119 DLSV--------LAAPYFTVEP--EFINAAEEETVTFECKASGLP--EPEIHWVHNGKPI 166
            LS+          AP   V P    + A   ET T EC A+  P  +  + W  NG  I
Sbjct: 222 HLSIARDVGTPETMAPTIVVPPGNRSVVAGSSET-TLECIANARPVEDLSVTWKRNGVRI 280

Query: 167 SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGY---VYKDVYVNVLAHAPEITE 223
           +    +  R     R+TI N   +DTG Y C A    G         ++ ++   P  T 
Sbjct: 281 TSGLHSFGR-----RLTISNPTSADTGPYVCEAALRGGAFEPARAKAFLFII-EPPYFTA 334

Query: 224 APKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITDVAF 279
            P+   + +  +TV + C+  G P P + W  +      L   RY +L +G L+I  ++ 
Sbjct: 335 EPESRISAEVEETVDIGCQAMGVPLPTLQWYKDAISISRLQNPRYKVLASGGLRIQKLSP 394

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHI-TDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            DSG + CFA N+ G  Q    L V     + T +P D  V  G +A  RC     P  K
Sbjct: 395 EDSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRPVDTTVTDGMTAILRCEVSGAP--K 452

Query: 339 LSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            +I W R +  +   S   PRF+      L +      D+G YTC A      + A A L
Sbjct: 453 PAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANTEGSLNASAML 512

Query: 397 TV---QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQ-SLRGHFRGYKV--------QTWT 444
           TV      +  P +  +I+   A     + +   P+ SLR  ++   V        +   
Sbjct: 513 TVWNRTSIIHPPEDHVVIKGTTATLHCGATH--DPRVSLRYVWKKDNVALTPSSTSRIVV 570

Query: 445 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVP 504
           EKDG   I +         T E+   V    N +R+            E+I        P
Sbjct: 571 EKDGSLLISQTWSGDIGDYTCEI---VSEGGNDSRMARL---------EVIEL------P 612

Query: 505 GTVQSLEAIPLG--SSAFYLKWVKPEQPNGVLMGYKIKYQ------SVKGTKVGPLLERL 556
            + Q+L A P    S A  L WV+P   N  ++ Y ++         V  + VGP +   
Sbjct: 613 HSPQNLLASPKSSHSHAVVLSWVRPFDGNSPILYYVVELSENNSPWKVHLSNVGPEM--- 669

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG---AESKYLFY---VPFKNPDNVEG 610
                   T   ++GL P+  Y+  +    + G G   AE+  L      P   P N+  
Sbjct: 670 --------TGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVA 721

Query: 611 RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT 670
            G T  ++++ W   PE EHN     Y + +R       + Q ++     +  ++ +   
Sbjct: 722 SGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNITSPEVNYCLVTDLII 781

Query: 671 FQPYEIKV 678
           +  YEI+V
Sbjct: 782 WTQYEIQV 789



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 2/142 (1%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP N   +  + A +  V+W+P  P+S  G+ +GYK+  W E D +    ++ V   
Sbjct: 1652 PAMAPQNVQ-VTPLTASQLEVTWDPPPPESQNGNIQGYKIYYW-EADSQNETEKMKVLFL 1709

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
                 ++      +K    + AFN A +GP S+     T +  PG    L    + S+  
Sbjct: 1710 PEPVVKLKNLTSHTKYLVSISAFNAAGDGPRSDPQQGRTHQAAPGAPSFLAFSEITSTTL 1769

Query: 521  YLKWVKPEQPNGVLMGYKIKYQ 542
             + W +P   NG+L GY++ Y+
Sbjct: 1770 NVSWGEPAAANGILQGYRVVYE 1791



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 101/275 (36%), Gaps = 29/275 (10%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           APYF  EP       E   +   C A G    E  W+HN   ++             +  
Sbjct: 47  APYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMHNDSELTTYSSE-------YKYI 99

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR-V 242
           I +L+K D G Y C   N +G + +      +A+     +  + +    G+  +L    +
Sbjct: 100 IPSLQKLDAGFYRCVVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVSQGRAAILNLLPI 159

Query: 243 FGAPKPEVNWIH-NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNK--------- 292
              P+P+V W     K +   R  I     L I     +DSG Y   A N+         
Sbjct: 160 TSYPRPQVTWFREGHKIIPSNRIAITLENQLVILATTTSDSGAYYVQAVNEKNGENKTSP 219

Query: 293 ---LGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSE 348
              L  A+  G+      T I   P +  V AG S  T  C A + P   LS+ W R   
Sbjct: 220 FIHLSIARDVGTPETMAPT-IVVPPGNRSVVAGSSETTLECIANARPVEDLSVTWKRNGV 278

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            I        + S    LT++  +  D+G Y C A
Sbjct: 279 RIT-----SGLHSFGRRLTISNPTSADTGPYVCEA 308



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 10/207 (4%)

Query: 397  TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIRE 454
            T+Q P +       ++        + W P+      G+    GY+++ W       ++ +
Sbjct: 1119 TLQAPPDVAPTSVTVRTASETSLRLRWVPLQDSQYNGNPESVGYRIKYWRSDLQSSALAQ 1178

Query: 455  LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEAI 513
            ++ ++ E   T +++     +   ++ AFN    GP SE++   T E VP    +++ A 
Sbjct: 1179 VVSDRLEREFT-IEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRESVPSAAPENVSAE 1237

Query: 514  PLGSSAFYLKWVK-PEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAG 571
             + S+   L W   PEQ  NG+++GYKI +++ K     P   R   +    T SA LAG
Sbjct: 1238 AVSSTQILLTWASVPEQDQNGLILGYKILFRA-KDLDPEP---RSHIVRGNHTQSALLAG 1293

Query: 572  LEPSTKYRIHLAGYTKAGDGAESKYLF 598
            L     Y + +  +T+ G+G  S  L 
Sbjct: 1294 LRKFVLYELQVLAFTRIGNGVPSTPLI 1320



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 94/229 (41%), Gaps = 30/229 (13%)

Query: 391  EAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV--QTWTEKD 447
            E +A  T+Q VP E P + +      +   ++ W P   +SL G  +GY++  +    + 
Sbjct: 1518 ETEAVTTLQDVPGEPPGSVSATPHTTSS-VLIQWQPPRDESLNGLLQGYRIYYRELEYEA 1576

Query: 448  GEGS----IRELIVNKGESTTTEVDKFVPAS-----------KNFARVLAFNGAYN---- 488
            G G+    ++  I  + E T     K V +S           K + R      AYN    
Sbjct: 1577 GSGTEAKTLKSPIALRAELTAQSSFKTVNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGE 1636

Query: 489  GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
             P S  +     E  P    Q+++  PL +S   + W    PE  NG + GYKI Y    
Sbjct: 1637 SPASAPVEVFVGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEAD 1696

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
                   ++ L ++ +P     KL  L   TKY + ++ +  AGDG  S
Sbjct: 1697 SQNETEKMKVL-FLPEPV---VKLKNLTSHTKYLVSISAFNAAGDGPRS 1741



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 13/161 (8%)

Query: 389 FIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
           F  A    T+Q VP   P N    + +++      WNP   Q + G  +GYK+  W    
Sbjct: 800 FSRAVTEYTLQGVPTAPPQNVQ-TEAVNSTTIQFLWNPPPQQFINGINQGYKLLAWLADA 858

Query: 448 GEGSIRELI------VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
            E      I      V+ G    T + KF   +  F  VL F    +GPPS      T E
Sbjct: 859 PEAVTVVTIAPDFHGVHHGH--ITNLKKF---TAYFTSVLCFTTPGDGPPSTPQLVWTHE 913

Query: 502 GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
             PG V  L    +  ++  + W +P + NG++ GY+I ++
Sbjct: 914 DKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQISWE 954



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 3/144 (2%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V  Q   G   GYK+  +  KD +   R  IV  
Sbjct: 1226 VPSAAPENVS-AEAVSSTQILLTWASVPEQDQNGLILGYKI-LFRAKDLDPEPRSHIVRG 1283

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-IISFVTPEGVPGTVQSLEAIPLGSS 518
              + +  +           +VLAF    NG PS  +I   T +  PG    L    +  +
Sbjct: 1284 NHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLT 1343

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQ 542
            +  + W  PE+PNG+++GY+I Y+
Sbjct: 1344 SVRIVWQPPEEPNGIILGYQIXYR 1367



 Score = 46.2 bits (108), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 64/166 (38%), Gaps = 8/166 (4%)

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
           TE    +  ++G  +VLTC   G+   E  W+HN  ELT    T        I  +   D
Sbjct: 52  TEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMHNDSELT----TYSSEYKYIIPSLQKLD 107

Query: 282 SGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           +G Y C  RN++G   Q    + V       D  +   V  G++A      ++    +  
Sbjct: 108 AGFYRCVVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVSQGRAAILNLLPITS-YPRPQ 166

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + W R    I   +       N   +  T +S  DSG Y  +A  E
Sbjct: 167 VTWFREGHKIIPSNRIAITLENQLVILATTTS--DSGAYYVQAVNE 210



 Score = 43.9 bits (102), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 88/208 (42%), Gaps = 27/208 (12%)

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFVTPEGVPGTVQ-SLEAIPLGSS 518
            E+T   VD+  P +    R+ A N   +    SE  +  T + VPG    S+ A P  +S
Sbjct: 1485 EATACVVDRLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTS 1544

Query: 519  AFYLKWVKP--EQPNGVLMGYKIKYQSVK-----GTKV----GPLLERLPYI-------- 559
            +  ++W  P  E  NG+L GY+I Y+ ++     GT+      P+  R            
Sbjct: 1545 SVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKSPIALRAELTAQSSFKTV 1604

Query: 560  -SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYV----PFKNPDNVEGRGS 613
             S  T+T  +L  L+   +Y + +  Y   G+  A +    +V    P   P NV+    
Sbjct: 1605 NSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTPL 1664

Query: 614  TPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            T + L ++W   P    N     Y+I++
Sbjct: 1665 TASQLEVTWDPPPPESQNGNIQGYKIYY 1692


>gi|330864743|ref|NP_001193491.1| neuronal cell adhesion molecule [Bos taurus]
          Length = 1180

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/393 (35%), Positives = 200/393 (50%), Gaps = 19/393 (4%)

Query: 24  ISASQNRHAPK-----QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DG-VPINP 76
           ISA  +R  P          +RK+E  LR   + L CI  G P P   W K DG +PIN 
Sbjct: 239 ISAKSHRQRPPTFLTPDGNTSRKEE--LRGNVLSLECIAEGLPTPIIYWIKEDGTLPIN- 295

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFIN 136
             R    N+ K+L I  V  +D G+Y C   N +G A  ++I ++V AAPY+ + P+ + 
Sbjct: 296 --RTFYRNFKKTLQIVQVTEADSGNYQCIAKNALG-AIHHTISVTVKAAPYWIIAPQNLV 352

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
            + EE  T  C+A+G P+P I W+ NG PI  AP +P RK+  + I    +++  +  Y 
Sbjct: 353 LSPEEDGTLICRANGNPKPRISWLSNGVPIEIAPDDPSRKIDGDTIIFSKVQERSSAVYQ 412

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHN 255
           CNA+N  GY+  + +VNVLA  P I  +    Y V   +  +L C  FG+P P + W   
Sbjct: 413 CNASNEYGYLLANAFVNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPLPTIEWFKG 472

Query: 256 QK--ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
            K   L    Y + E G L+I       +G YTC ARNKLG A+    L +K+ T I  Q
Sbjct: 473 AKGSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDPTRIIKQ 532

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           PE   V+ G + +F C    D +L  +++WL+     +  ++ RF    D  L V   ++
Sbjct: 533 PEYAVVQRGSTVSFECKVKHDHTLIPTVMWLKDHG--ELPNDGRFTVDKD-RLVVADVND 589

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPS 406
            D G YTC A T LD + A A L+V  P   P+
Sbjct: 590 DDGGTYTCVANTTLDNVSASAVLSVVAPTPTPA 622



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 158/642 (24%), Positives = 262/642 (40%), Gaps = 70/642 (10%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTC--EVSNGVGEAKSYSIDLSVLAA------PYF 128
           S+R+SQG  G       +    +  Y C    ++     +   I + V++A      P  
Sbjct: 191 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISAKSHRQRPPT 250

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGK--PISQAPPNPRRKVGPNRI 182
            + P+   + +EE     ++ EC A GLP P I+W+      PI++      +K     +
Sbjct: 251 FLTPDGNTSRKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKKT----L 306

Query: 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRV 242
            I  + ++D+GNY C A N+LG ++  + V V A AP    AP++      +   L CR 
Sbjct: 307 QIVQVTEADSGNYQCIAKNALGAIHHTISVTVKA-APYWIIAPQNLVLSPEEDGTLICRA 365

Query: 243 FGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGS 299
            G PKP ++W+ N    E+     +    GD  I + V    S  Y C A N+ G    +
Sbjct: 366 NGNPKPRISWLSNGVPIEIAPDDPSRKIDGDTIIFSKVQERSSAVYQCNASNEYGYLLAN 425

Query: 300 GSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             + V       +T     Y+V A + A   C     P    +I W +G++      E  
Sbjct: 426 AFVNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALR-EDI 482

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVI 414
           +V   + +L +  + +  +G YTC A+ +L   +    L ++ P   ++ P  + ++Q  
Sbjct: 483 YVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDPTRIIKQPE-YAVVQ-- 539

Query: 415 DAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
             + + VS+       ++          W +  GE      + N G  T  + D+ V A 
Sbjct: 540 --RGSTVSFE----CKVKHDHTLIPTVMWLKDHGE------LPNDGRFTVDK-DRLVVAD 586

Query: 475 KN-----FARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYL 522
            N         +A     N   S ++S V P   P  +  +   P           +  L
Sbjct: 587 VNDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNPPFDLELTDQLDRSVQL 646

Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
            W   +  N  +  + I+Y+        P L         T T+A+L  L P   Y   +
Sbjct: 647 SWTPGDDNNSPITKFIIEYEDAMHE---PGLWHHQTEVPGTQTTAQLK-LSPYVNYSFRV 702

Query: 583 AGYTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
                 G      A  +YL     P KNP  VEG GS P+NLVI+W  +   E N P  +
Sbjct: 703 MAENNLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQ 762

Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           Y++ WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 763 YKVSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 802



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 96/201 (47%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 825  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRNRRHIEKK 883

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 884  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDKVFNTPEGVPSAPSSLKIVN 943

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 944  PTLDSLTLEWEPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPA----NKTRWILKNL 999

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G +
Sbjct: 1000 NFSTRYKFYFYAQTAAGSGIQ 1020



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 146/608 (24%), Positives = 226/608 (37%), Gaps = 67/608 (11%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I   V+      Y C  S
Sbjct: 361 LICRANGNPKPRISWLSNGVPIEIAPDDPSRKID----GDTIIFSKVQERSSAVYQCNAS 416

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T                +C   G P P I W    K 
Sbjct: 417 NEYGYLLANAF-VNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 474

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    DV++ +      I + 
Sbjct: 475 -GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPTRIIKQ 532

Query: 225 PKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P+      G TV   C+V       P V W+ +  EL   GR+T+ +   L + DV   D
Sbjct: 533 PEYAVVQRGSTVSFECKVKHDHTLIPTVMWLKDHGELPNDGRFTV-DKDRLVVADVNDDD 591

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G YTC A   L     S  L+V     +   P    +    +  F           + +
Sbjct: 592 GGTYTCVANTTLDNVSASAVLSV-----VAPTPTPAPIYDVPNPPFDLELTDQLDRSVQL 646

Query: 342 VWLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQA 394
            W  G +   PI     E E    +   +           + Q          F + A+ 
Sbjct: 647 SWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVPGTQTTAQLKLSPYVNYSFRVMAEN 706

Query: 395 TLTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQ 441
            L   +P EA   +           T ++ + ++    V++W P++     G    YKV 
Sbjct: 707 NLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV- 765

Query: 442 TWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFV- 498
           +W +KDG+     ++V N  +   +    FVP      +V A N A   P P+ ++    
Sbjct: 766 SWRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDAGFAPEPAAVMGHSG 822

Query: 499 --TPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKG--TKVGPL 552
              P   PG V+      + S+   + W  V  +   G L GY+I Y   +   T+    
Sbjct: 823 EDLPMVAPGNVR---VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRNRRH 879

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRG 612
           +E+       + T   L GLEP + Y +++      G+G  S      P K  +  EG  
Sbjct: 880 IEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPAS------PDKVFNTPEGVP 933

Query: 613 STPNNLVI 620
           S P++L I
Sbjct: 934 SAPSSLKI 941



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 127/297 (42%), Gaps = 32/297 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   +TI  +   K++T  G Y
Sbjct: 62  ENIVIQCEAKGKPSPSFSWTRNGTHFDIDKDPLVTMKPGSGTLTINIMSEGKAETYEGVY 121

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVN-WI 253
            C A N  G    +  V   + +P  T+   +   + +G+++VL CR      P +  W+
Sbjct: 122 QCTARNERGAAISNNIVIRPSRSPLWTKEKLEPIILRNGQSLVLPCRPPIGLPPPIIFWM 181

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK---E 306
            N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK    
Sbjct: 182 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISA 241

Query: 307 HTHITDQPEDYEVEAGQSAT---FRCNAVSDPSLKLS-----IVWLR--GSEPIDFESEP 356
            +H   +P  +    G ++     R N +S   +        I W++  G+ PI+     
Sbjct: 242 KSH-RQRPPTFLTPDGNTSRKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINRT--- 297

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
            F ++   +L + + +E DSG Y C A+  L  I    ++TV+     + AP N  L
Sbjct: 298 -FYRNFKKTLQIVQVTEADSGNYQCIAKNALGAIHHTISVTVKAAPYWIIAPQNLVL 353


>gi|462740|sp|P35331.1|NRCAM_CHICK RecName: Full=Neuronal cell adhesion molecule; Short=Nr-CAM;
           AltName: Full=Neuronal surface protein Bravo;
           Short=gBravo; AltName: Full=NgCAM-related cell adhesion
           molecule; Short=Ng-CAM-related; Flags: Precursor
          Length = 1284

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 162/528 (30%), Positives = 242/528 (45%), Gaps = 48/528 (9%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           +V LR   + L CI  G P P   W K+G  + P++R    N+ K+L I  V  +D G+Y
Sbjct: 256 KVELRGNVLLLECIAAGLPTPVIRWIKEGGEL-PANRTFFENFKKTLKIIDVSEADSGNY 314

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C   N +G +  + I ++V AAPY+   P  +  +  E  T  C+A+G P+P I W+ N
Sbjct: 315 KCTARNTLG-STHHVISVTVKAAPYWITAPRNLVLSPGEDGTLICRANGNPKPSISWLTN 373

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI- 221
           G PI+ AP +P RKV  + I    +++  +  Y CNA+N  GY+  + +VNVLA  P I 
Sbjct: 374 GVPIAIAPEDPSRKVDGDTIIFSAVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRIL 433

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAF 279
           T A K    +     ++ C  FG+PKPE+ W    K   L G  Y   + G L+I     
Sbjct: 434 TPANKLYQVIADSPALIDCAYFGSPKPEIEWFRGVKGSILRGNEYVFHDNGTLEIPVAQK 493

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
             +G YTC ARNKLG  Q    L VK+ T I  QP+   ++    A+F C    DP+L  
Sbjct: 494 DSTGTYTCVARNKLGKTQNEVQLEVKDPTMIIKQPQYKVIQRSAQASFECVIKHDPTLIP 553

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           +++WL+ +   +   + RF+   D +LT+   ++ D G YTC   T LD + A A LTV 
Sbjct: 554 TVIWLKDNN--ELPDDERFLVGKD-NLTIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVV 610

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGS-IRELIVN 458
                P+      +I A+      NP     L G        +W   +   S I   ++ 
Sbjct: 611 AAPPTPA------IIYARP-----NPPLDLELTGQLERSIELSWVPGEENNSPITNFVIE 659

Query: 459 -----------------KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IIS 496
                             G  TT ++ K  P      RV+A N      PSE     +  
Sbjct: 660 YEDGLHEPGVWHYQTEVPGSHTTVQL-KLSPYVNYSFRVIAVNEIGRSQPSEPSEQYLTK 718

Query: 497 FVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQ 542
              P+  P  VQ + + P       + W  +K  Q NG  + YK+ ++
Sbjct: 719 SANPDENPSNVQGIGSEP---DNLVITWESLKGFQSNGPGLQYKVSWR 763



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 167/671 (24%), Positives = 266/671 (39%), Gaps = 91/671 (13%)

Query: 59  GTPLPQTIWSKDGVPINP-SDRISQGNYGKSLIIKHVEFSD-QGSYTC--EVSNGVGEAK 114
           G P P   W  +     P S+R+SQG  G  L   +V+  D +  Y C    ++     +
Sbjct: 167 GLPPPIIFWMDNAFQRLPQSERVSQGLNG-DLYFSNVQPEDTRVDYICYARFNHTQTIQQ 225

Query: 115 SYSIDLSVLAAPYFTVEPEFI--------NAAEEE--TVTFECKASGLPEPEIHWVHNGK 164
              I + V +    T  P  +        N  E     +  EC A+GLP P I W+  G 
Sbjct: 226 KQPISVKVFSTKPVTERPPVLLTPMGSTSNKVELRGNVLLLECIAAGLPTPVIRWIKEGG 285

Query: 165 PISQAPPNPRRKVGPNRITIENLRKS---------DTGNYGCNATNSLGYVYKDVYVNVL 215
                      ++  NR   EN +K+         D+GNY C A N+LG  +  + V V 
Sbjct: 286 -----------ELPANRTFFENFKKTLKIIDVSEADSGNYKCTARNTLGSTHHVISVTVK 334

Query: 216 AHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD---L 272
           A AP    AP++     G+   L CR  G PKP ++W+ N   +           D   +
Sbjct: 335 A-APYWITAPRNLVLSPGEDGTLICRANGNPKPSISWLTNGVPIAIAPEDPSRKVDGDTI 393

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED--YEVEAGQSATFRCN 330
             + V    S  Y C A N+ G    +  + V         P +  Y+V A   A   C 
Sbjct: 394 IFSAVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPANKLYQVIADSPALIDCA 453

Query: 331 AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
               P  K  I W RG +         +V  ++ +L +  + +  +G YTC A+ +L   
Sbjct: 454 YFGSP--KPEIEWFRGVKGSILRGN-EYVFHDNGTLEIPVAQKDSTGTYTCVARNKLGKT 510

Query: 391 EAQATLTVQVP---LEAPSNFTLIQVIDAK-KAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
           + +  L V+ P   ++ P    + +   A  + V+  +P    ++           W + 
Sbjct: 511 QNEVQLEVKDPTMIIKQPQYKVIQRSAQASFECVIKHDPTLIPTV----------IWLKD 560

Query: 447 DGE---------GSIRELIVN---KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
           + E         G     I+N   K + T T +      S + + VL    A   PP+  
Sbjct: 561 NNELPDDERFLVGKDNLTIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVVAA---PPTPA 617

Query: 495 ISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQS-VKGTKVGPLL 553
           I +  P         LE       +  L WV  E+ N  +  + I+Y+  +    V    
Sbjct: 618 IIYARP----NPPLDLELTGQLERSIELSWVPGEENNSPITNFVIEYEDGLHEPGVWHYQ 673

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES----KYLFYV--PFKNPDN 607
             +P     TT   KL+   P   Y   +    + G    S    +YL     P +NP N
Sbjct: 674 TEVP--GSHTTVQLKLS---PYVNYSFRVIAVNEIGRSQPSEPSEQYLTKSANPDENPSN 728

Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667
           V+G GS P+NLVI+W ++   + N P  +Y++ WR+ +  + W    V+    S+ +++ 
Sbjct: 729 VQGIGSEPDNLVITWESLKGFQSNGPGLQYKVSWRQKDVDDEWTS--VVVANVSKYIVSG 786

Query: 668 QPTFQPYEIKV 678
            PTF PYEIKV
Sbjct: 787 TPTFVPYEIKV 797



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 140/591 (23%), Positives = 239/591 (40%), Gaps = 79/591 (13%)

Query: 55   CIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
            C + G+P P+  W +   G  +  ++ +   N   +L I   +    G+YTC   N +G+
Sbjct: 452  CAYFGSPKPEIEWFRGVKGSILRGNEYVFHDN--GTLEIPVAQKDSTGTYTCVARNKLGK 509

Query: 113  AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPE--PEIHWVHNGKPISQAP 170
             ++  + L V        +P++         +FEC     P   P + W+ +    ++ P
Sbjct: 510  TQN-EVQLEVKDPTMIIKQPQYKVIQRSAQASFECVIKHDPTLIPTVIWLKDN---NELP 565

Query: 171  PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP----------- 219
             + R  VG + +TI N+   D G Y C    +L  V     + V+A  P           
Sbjct: 566  DDERFLVGKDNLTIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVVAAPPTPAIIYARPNP 625

Query: 220  --------------EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
                          E++  P +E        V+     G  +P V W H Q E+ G   T
Sbjct: 626  PLDLELTGQLERSIELSWVPGEENNSPITNFVIEYE-DGLHEPGV-W-HYQTEVPGSHTT 682

Query: 266  ILETGDLKITDVAFADSGEYTCFARNKLGTAQGS--------GSLTVKEHTH----ITDQ 313
            +     LK++      +  +   A N++G +Q S         S    E+      I  +
Sbjct: 683  V----QLKLSPYV---NYSFRVIAVNEIGRSQPSEPSEQYLTKSANPDENPSNVQGIGSE 735

Query: 314  PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            P++  +       F+ N    P L+  + W +     ++ S    V +N     V+ +  
Sbjct: 736  PDNLVITWESLKGFQSNG---PGLQYKVSWRQKDVDDEWTS---VVVANVSKYIVSGTPT 789

Query: 374  LDSGQYTCRAQTELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQ 429
                +   +A  +L +    + +       +P+ AP N   + VI++  A V W+PV  +
Sbjct: 790  FVPYEIKVQALNDLGYAPEPSEVIGHSGEDLPMVAPGNVQ-VHVINSTLAKVHWDPVPLK 848

Query: 430  SLRGHFRGYKVQTW-----TEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN 484
            S+RGH +GYKV  W     + +      ++++  +G  T   +    P S     V   N
Sbjct: 849  SVRGHLQGYKVYYWKVQSLSRRSKRHVEKKILTFRGNKTFGMLPGLEPYSSYKLNVRVVN 908

Query: 485  GAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
            G   GP S    F TPEGVP     L+       +  L+W  P  PNGVL  Y +K+Q +
Sbjct: 909  GKGEGPASPDKVFKTPEGVPSPPSFLKITNPTLDSLTLEWGSPTHPNGVLTSYILKFQPI 968

Query: 545  KGT-KVGPLLE-RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
              T ++GPL+E R+P       +S  L  L  ST+Y+ +    T  G G++
Sbjct: 969  NNTHELGPLVEIRIPA----NESSLILKNLNYSTRYKFYFNAQTSVGSGSQ 1015



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 148/616 (24%), Positives = 223/616 (36%), Gaps = 81/616 (13%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P   W  +GVPI     +PS ++     G ++I   V+      Y C  S
Sbjct: 356 LICRANGNPKPSISWLTNGVPIAIAPEDPSRKVD----GDTIIFSAVQERSSAVYQCNAS 411

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P  +      +     +C   G P+PEI W   G  
Sbjct: 412 NEYGYLLANAF-VNVLAEPPRILTPANKLYQVIADSPALIDCAYFGSPKPEIEWFR-GVK 469

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
            S    N         + I   +K  TG Y C A N LG    +V + V      I + P
Sbjct: 470 GSILRGNEYVFHDNGTLEIPVAQKDSTGTYTCVARNKLGKTQNEVQLEV-KDPTMIIKQP 528

Query: 226 KDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRYTILETGDLKITDVAFADSG 283
           + +           C +   P   P V W+ +  EL      ++   +L I +V   D G
Sbjct: 529 QYKVIQRSAQASFECVIKHDPTLIPTVIWLKDNNELPDDERFLVGKDNLTIMNVTDKDDG 588

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVW 343
            YTC     L +   S  LTV     +   P    + A  +              + + W
Sbjct: 589 TYTCIVNTTLDSVSASAVLTV-----VAAPPTPAIIYARPNPPLDLELTGQLERSIELSW 643

Query: 344 LRGSE---PI--------DFESEP------------------RFVQSNDYSLTVTKSSEL 374
           + G E   PI        D   EP                  +     +YS  V   +E+
Sbjct: 644 VPGEENNSPITNFVIEYEDGLHEPGVWHYQTEVPGSHTTVQLKLSPYVNYSFRVIAVNEI 703

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
              Q    ++    ++   A      P E PSN   I   +    V++W  +      G 
Sbjct: 704 GRSQ---PSEPSEQYLTKSAN-----PDENPSNVQGIGS-EPDNLVITWESLKGFQSNGP 754

Query: 435 FRGYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNG-AYNGPPS 492
              YKV +W +KD +     ++V N  +   +    FVP      +V A N   Y   PS
Sbjct: 755 GLQYKV-SWRQKDVDDEWTSVVVANVSKYIVSGTPTFVPYE---IKVQALNDLGYAPEPS 810

Query: 493 EIISFV---TPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT 547
           E+I       P   PG VQ      + S+   + W  V  +   G L GYK+ Y  V+  
Sbjct: 811 EVIGHSGEDLPMVAPGNVQ---VHVINSTLAKVHWDPVPLKSVRGHLQGYKVYYWKVQSL 867

Query: 548 --KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
             +    +E+         T   L GLEP + Y++++      G+G  S       FK P
Sbjct: 868 SRRSKRHVEKKILTFRGNKTFGMLPGLEPYSSYKLNVRVVNGKGEGPASPDKV---FKTP 924

Query: 606 DNVEGRGSTPNNLVIS 621
              EG  S P+ L I+
Sbjct: 925 ---EGVPSPPSFLKIT 937



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 122/296 (41%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS---QAPPNPRRKVGPNRITIENLRKSDT--GNY 195
           E +  +C+A G P P   W  NG        A    +   G   + I N  K++   G Y
Sbjct: 57  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDAQVTMKPNSGTLVVNIMNGVKAEAYEGVY 116

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEIT-EAPKDEYTVDGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +  V   + +P  T E  +  +  +G ++VL CR   G P P + W+
Sbjct: 117 QCTARNERGAAISNNIVIRPSRSPLWTKEKLEPNHVREGDSLVLNCRPPVGLPPPIIFWM 176

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSG-EYTCFAR-NKLGTAQGSGSLTVKEHTH 309
            N  Q+     R +    GDL  ++V   D+  +Y C+AR N   T Q    ++VK  + 
Sbjct: 177 DNAFQRLPQSERVSQGLNGDLYFSNVQPEDTRVDYICYARFNHTQTIQQKQPISVKVFST 236

Query: 310 --ITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             +T++P       G ++             C A   P+    I W++  E  +  +   
Sbjct: 237 KPVTERPPVLLTPMGSTSNKVELRGNVLLLECIAAGLPT--PVIRWIK--EGGELPANRT 292

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
           F ++   +L +   SE DSG Y C A+  L       ++TV+     + AP N  L
Sbjct: 293 FFENFKKTLKIIDVSEADSGNYKCTARNTLGSTHHVISVTVKAAPYWITAPRNLVL 348


>gi|410899607|ref|XP_003963288.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
           [Takifugu rubripes]
          Length = 1314

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 210/728 (28%), Positives = 301/728 (41%), Gaps = 83/728 (11%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           + ++V L+ ++++L CI GG P+P+  W K G  +  S R    N+GK L++   E +D 
Sbjct: 295 QTEKVVLKGERLQLECIPGGYPIPKIKWMKMGEKL--SSRTQFDNFGKLLLLSDTEENDG 352

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFIN-AAEEETVTFECKASGLPEPEIH 158
           G Y C+  N  GEA  Y  D+ V   P +  EP           V  +C  SG P P+I 
Sbjct: 353 GKYMCKAQNAAGEAVHY-FDVIVEEPPKWLTEPPRDQLTVIGSDVHIKCSVSGKPPPDIT 411

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W  NG+  +  P N RR V  + + + N    DT  Y C+A+NS G +  ++ + V+  A
Sbjct: 412 WRKNGELFTDDPQNNRR-VLDDTVVLHNAGPEDTAVYQCDASNSHGSLLANINIMVMNMA 470

Query: 219 PEITEAPKDEY-TVDGKTVVLTCRVFGAPKPEVNWIH--NQKELTGGRYTILETGDLKIT 275
           P I      EY  V G  VV+ C VFG+P P V+W     Q+ + GGR+  L+ G L+I 
Sbjct: 471 PRILTRDSQEYPVVQGADVVMNCSVFGSPPPTVSWSRGATQETIEGGRFFALQNGSLQII 530

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
            V   D G+Y C A N  G +  S  L VK+ T I  +P+D EV +G +A   C A  D 
Sbjct: 531 GVEKEDGGKYVCVALNAEGKSAVSAMLEVKDPTRIISRPQDAEVVSGTTAQLNCLAEYDK 590

Query: 336 SLKLS--IVWLRGSEPIDFESEPRFVQSNDYS------LTVTKSSELDSGQYTCRAQTEL 387
           SL+ S  +VW +  E I     P  VQ N         L +      D+G YTC A+T L
Sbjct: 591 SLQDSFELVWRKDGEDI-----PLAVQENSRHGVDGAVLQIINVDLSDNGLYTCVARTSL 645

Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQ--SLRGHFRGYKVQTWTE 445
           D   A A LTV    +AP    + ++   +   +SW P S    S+      Y+   W  
Sbjct: 646 DEENATALLTVLDVPDAPLKLEISEIRSPRNISLSWVPGSDHNSSVTEFVVEYEESQWE- 704

Query: 446 KDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVP 504
               G  R+     G   T  +         F RV A N    GPPS+      TP   P
Sbjct: 705 ---PGRWRDFQRVPGNQATAMLALQGDLDYKF-RVYAVNAVGPGPPSDPTERHKTPPAAP 760

Query: 505 -GTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYI 559
               QS++          + W  + P + NG  + YK+ Y+   V+      L++R  ++
Sbjct: 761 EKNPQSIKIQGHRPHQMDISWEPLLPIEHNGPGLEYKVSYRRLGVEEEWKEHLVKRHSFV 820

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF-----YVPFKNPDNVEGRGST 614
               +T            Y + +      G G E K +       VP   P +V      
Sbjct: 821 VRNVST---------FVPYEVKIQSKNNQGWGPEPKVVTGYSGEDVPAAAPRDVAVEVFN 871

Query: 615 PNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPY 674
              L +SWT +           Y+I W R  +    N +  LD RQS L           
Sbjct: 872 TTALRVSWTPVLPATVRGHLGGYKIHWSRLRS--LMNLNKTLDERQSLLF---------- 919

Query: 675 EIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 734
                                   G  T   V    P S+    V  +N   NGP S+ +
Sbjct: 920 -----------------------PGRRTQAIVPGLEPFSEYRLTVSVYNKKGNGPNSDPV 956

Query: 735 SFVTPEGG 742
            F TPEG 
Sbjct: 957 IFRTPEGA 964



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 96/198 (48%), Gaps = 10/198 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSI------R 453
            VP  AP +   ++V +     VSW PV P ++RGH  GYK+  W+      ++      R
Sbjct: 857  VPAAAPRDVA-VEVFNTTALRVSWTPVLPATVRGHLGGYKIH-WSRLRSLMNLNKTLDER 914

Query: 454  ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAI 513
            + ++  G  T   V    P S+    V  +N   NGP S+ + F TPEG    V  L A 
Sbjct: 915  QSLLFPGRRTQAIVPGLEPFSEYRLTVSVYNKKGNGPNSDPVIFRTPEG--AQVPILTAY 972

Query: 514  PLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLE 573
                ++  L+W  P Q NG+L+GY ++   +  T +  +  R   I+   TT  ++ GLE
Sbjct: 973  KTQKNSVLLEWGSPLQTNGILIGYLLQCHHINKTTMEVVDSREVNITVADTTQWQIQGLE 1032

Query: 574  PSTKYRIHLAGYTKAGDG 591
              + YR  L+G T+AG G
Sbjct: 1033 EGSLYRFLLSGCTQAGCG 1050



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 133/624 (21%), Positives = 234/624 (37%), Gaps = 68/624 (10%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQG 100
           + ++ +    V + C   G P P   W K+G       + ++     ++++ +    D  
Sbjct: 386 RDQLTVIGSDVHIKCSVSGKPPPDITWRKNGELFTDDPQNNRRVLDDTVVLHNAGPEDTA 445

Query: 101 SYTCEVSNGVGE-AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHW 159
            Y C+ SN  G    + +I +  +A    T + +     +   V   C   G P P + W
Sbjct: 446 VYQCDASNSHGSLLANINIMVMNMAPRILTRDSQEYPVVQGADVVMNCSVFGSPPPTVSW 505

Query: 160 VHNGKPISQAPPNPRR--KVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAH 217
                  +Q      R   +    + I  + K D G Y C A N+ G       + V   
Sbjct: 506 SRGA---TQETIEGGRFFALQNGSLQIIGVEKEDGGKYVCVALNAEGKSAVSAMLEV-KD 561

Query: 218 APEITEAPKDEYTVDGKTVVLTCRV----FGAPKPEVNWIHNQKEL-----TGGRYTILE 268
              I   P+D   V G T  L C            E+ W  + +++        R+ + +
Sbjct: 562 PTRIISRPQDAEVVSGTTAQLNCLAEYDKSLQDSFELVWRKDGEDIPLAVQENSRHGV-D 620

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
              L+I +V  +D+G YTC AR  L     +  LTV +   + D P   E+   +S    
Sbjct: 621 GAVLQIINVDLSDNGLYTCVARTSLDEENATALLTVLD---VPDAPLKLEISEIRSPR-- 675

Query: 329 CNAVSDPSLKLSIVWLRGSEP--------IDFES---EP------RFVQSNDYSLTVTKS 371
                     +S+ W+ GS+         +++E    EP      + V  N  +  +   
Sbjct: 676 ---------NISLSWVPGSDHNSSVTEFVVEYEESQWEPGRWRDFQRVPGNQATAMLALQ 726

Query: 372 SELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPS---NFTLIQVIDAKKAVVSWNPVSP 428
            +LD                +  T   + P  AP        IQ     +  +SW P+ P
Sbjct: 727 GDLDYKFRVYAVNAVGPGPPSDPTERHKTPPAAPEKNPQSIKIQGHRPHQMDISWEPLLP 786

Query: 429 QSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
               G    YKV ++     E   +E +V +       V  FVP      ++ + N    
Sbjct: 787 IEHNGPGLEYKV-SYRRLGVEEEWKEHLVKRHSFVVRNVSTFVPYE---VKIQSKNNQGW 842

Query: 489 GPPSEIISFVTPEGVPGTVQSLEAIPL-GSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
           GP  ++++  + E VP       A+ +  ++A  + W  V P    G L GYKI +  ++
Sbjct: 843 GPEPKVVTGYSGEDVPAAAPRDVAVEVFNTTALRVSWTPVLPATVRGHLGGYKIHWSRLR 902

Query: 546 GTK--VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFK 603
                   L ER   +     T A + GLEP ++YR+ ++ Y K G+G  S  +    F+
Sbjct: 903 SLMNLNKTLDERQSLLFPGRRTQAIVPGLEPFSEYRLTVSVYNKKGNGPNSDPVI---FR 959

Query: 604 NPDNVE-----GRGSTPNNLVISW 622
            P+  +        +  N++++ W
Sbjct: 960 TPEGAQVPILTAYKTQKNSVLLEW 983



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 92/378 (24%), Positives = 145/378 (38%), Gaps = 39/378 (10%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDG---VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           +K VE+ C   G P P+  W+KDG   VP   S   +Q   G  ++ K      QG Y C
Sbjct: 101 DKTVEIQCEARGNPPPEYRWTKDGEGFVPPRASTTKTQHTDGSFVLHKKQFIQFQGVYRC 160

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFT---VEPEFINAAEEETVTFECK-ASGLPEPEIHWV 160
              N +G A +  I L V  AP F    V P  ++  E + +T  C    G    ++ W+
Sbjct: 161 YAFNKLGTAMTEDIQLIVPTAPSFPKVGVPPIVVD--EGDPITLHCNPPKGAVPRQLFWM 218

Query: 161 HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
                + Q           N      L+     +Y CNA      +   V    +A +  
Sbjct: 219 SLDLQLIQQDERVSMGTDGNLYFAHALKNDTRQDYCCNA--KFPKLRTMVQKIGMAISVR 276

Query: 221 ITEAP--------------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
           I EAP               ++  + G+ + L C   G P P++ W+   ++L+  R   
Sbjct: 277 IPEAPPMRMPSMLLPPGVQTEKVVLKGERLQLECIPGGYPIPKIKWMKMGEKLS-SRTQF 335

Query: 267 LETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH-ITDQPEDYEVEAGQS 324
              G  L ++D    D G+Y C A+N  G A     + V+E    +T+ P D     G  
Sbjct: 336 DNFGKLLLLSDTEENDGGKYMCKAQNAAGEAVHYFDVIVEEPPKWLTEPPRDQLTVIGSD 395

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN----DYSLTVTKSSELDSGQYT 380
              +C+    P     I W +  E   F  +P   Q+N    D ++ +  +   D+  Y 
Sbjct: 396 VHIKCSVSGKP--PPDITWRKNGEL--FTDDP---QNNRRVLDDTVVLHNAGPEDTAVYQ 448

Query: 381 CRAQTELDFIEAQATLTV 398
           C A      + A   + V
Sbjct: 449 CDASNSHGSLLANINIMV 466


>gi|332864595|ref|XP_518946.3| PREDICTED: protein sidekick-1 [Pan troglodytes]
          Length = 2213

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 189/625 (30%), Positives = 275/625 (44%), Gaps = 44/625 (7%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
           + V   + +  L CI    P+      W ++GV      RI+ G  ++G+ L I +   +
Sbjct: 302 RSVVAGSSETTLECIASARPVEDLSVTWKRNGV------RITSGLHSFGRRLTISNPTSA 355

Query: 98  DQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPE 154
           D G Y CE +      E    +  L ++  PYFT EPE  I+A  EETV   C+A G+P 
Sbjct: 356 DTGPYVCEAALRGSAFEPARATAFLFIIEPPYFTAEPESRISAEVEETVDIGCQAMGVPL 415

Query: 155 PEIHWVHNGKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P + W  +   IS+   NPR KV     + I+ LR  D+G + C A+N  G +    Y++
Sbjct: 416 PTLQWYKDAISISRLQ-NPRYKVLASGGLRIQKLRPEDSGIFQCFASNEGGEIQTHTYLD 474

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V   AP  T+ P D    DG T +L C V GAPKP + W      L  G     R+ +LE
Sbjct: 475 VTNIAPVFTQRPVDTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLE 534

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L+I  V   D+G YTC+A N  G+   S +LTV   T I   PED+ V  G +AT  
Sbjct: 535 SGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNRTSIVHPPEDHVVIKGTTATLH 594

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A  DP + L  VW + +  +   S  R V   D SL ++++   D G Y+C   +E  
Sbjct: 595 CGATHDPRVSLRYVWKKDNVALTPSSTSRIVVEKDGSLLISQTWSGDIGDYSCEIVSEGG 654

Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV-SWNPVSPQSLRGHFRGYKVQTWTEKD 447
                A L V     +P N           AVV SW  V P         Y V+  +E +
Sbjct: 655 NDSRMARLEVIELPHSPQNLLASPNSSHSHAVVLSW--VRPFDGNSPILYYIVEL-SENN 711

Query: 448 GEGSIRELIVNKG-ESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEG 502
               +   + N G E T   V    PA     RV A N    G Y+   S ++    P  
Sbjct: 712 SPWKVH--LSNVGPEMTGITVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPS 769

Query: 503 VPGTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560
            P   +++ A    + +  ++W  P +   NGVL GY ++Y+ + G   G   +R   I+
Sbjct: 770 APP--KNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYR-LAGLP-GEYQQR--NIT 823

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEGRGSTP 615
            P      +  L   T+Y I +A Y  AG G  S+      L  VP   P NV+      
Sbjct: 824 SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNS 883

Query: 616 NNLVISWTAMPEIEHNAPHFKYRIF 640
             +   W   P+   N  +  Y++ 
Sbjct: 884 TTIQFLWNPPPQQFINGINQGYKLL 908



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 177/679 (26%), Positives = 266/679 (39%), Gaps = 113/679 (16%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN-GVGEAK-SYSI 118
           P PQ  W ++G  I PS+RI+       L+I     SD G+Y  +  N   GE K S  I
Sbjct: 219 PRPQVTWFREGHKIIPSNRIAI-TLENQLVILATTTSDAGAYYVQAVNEKNGENKTSPFI 277

Query: 119 DLSV--------LAAPYFTVEP--EFINAAEEETVTFECKASGLP--EPEIHWVHNGKPI 166
            LS+          AP   V P    + A   ET T EC AS  P  +  + W  NG  I
Sbjct: 278 HLSIARDVGTPETMAPTIVVPPGNRSVVAGSSET-TLECIASARPVEDLSVTWKRNGVRI 336

Query: 167 SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV---LAHAPEITE 223
           +    +  R     R+TI N   +DTG Y C A    G  ++         +   P  T 
Sbjct: 337 TSGLHSFGR-----RLTISNPTSADTGPYVCEAALR-GSAFEPARATAFLFIIEPPYFTA 390

Query: 224 APKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITDVAF 279
            P+   + +  +TV + C+  G P P + W  +      L   RY +L +G L+I  +  
Sbjct: 391 EPESRISAEVEETVDIGCQAMGVPLPTLQWYKDAISISRLQNPRYKVLASGGLRIQKLRP 450

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHI-TDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            DSG + CFA N+ G  Q    L V     + T +P D  V  G +A  RC     P  K
Sbjct: 451 EDSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRPVDTTVTDGMTAILRCEVSGAP--K 508

Query: 339 LSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            +I W R +  +   S   PRF+      L +      D+G YTC A      + A ATL
Sbjct: 509 PAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATL 568

Query: 397 TV---QVPLEAPSNFTLIQVIDA------------------KKAVVSWNPVSPQSLRGHF 435
           TV      +  P +  +I+   A                  KK  V+  P S   +    
Sbjct: 569 TVWNRTSIVHPPEDHVVIKGTTATLHCGATHDPRVSLRYVWKKDNVALTPSSTSRIVVEK 628

Query: 436 RGYKV--QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
            G  +  QTW+   G+ S    IV++G + +             AR+            E
Sbjct: 629 DGSLLISQTWSGDIGDYSCE--IVSEGGNDS-----------RMARL------------E 663

Query: 494 IISFVTPEGVPGTVQSLEAIPLG--SSAFYLKWVKPEQPNGVLMGYKIKYQ------SVK 545
           +I        P + Q+L A P    S A  L WV+P   N  ++ Y ++         V 
Sbjct: 664 VIEL------PHSPQNLLASPNSSHSHAVVLSWVRPFDGNSPILYYIVELSENNSPWKVH 717

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG---AESKYLFY--- 599
            + VGP +           T   ++GL P+  Y+  +    + G G   AE+  L     
Sbjct: 718 LSNVGPEM-----------TGITVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEE 766

Query: 600 VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
            P   P N+   G T  ++++ W   PE EHN     Y + +R       + Q ++    
Sbjct: 767 PPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNITSPE 826

Query: 660 QSELVLANQPTFQPYEIKV 678
            +  ++ +   +  YEI+V
Sbjct: 827 VNYCLVTDLIIWTQYEIQV 845



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 101/240 (42%), Gaps = 23/240 (9%)

Query: 389  FIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
            F  A    T+Q VP   P N    + +++      WNP   Q + G  +GYK+  W    
Sbjct: 856  FSRAVTEYTLQGVPTAPPQNVQ-TEAVNSTTIQFLWNPPPQQFINGINQGYKLLAWPADA 914

Query: 448  GEGSIRELI------VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
             E      I      V+ G    T + KF   +  F  VL F    +GPPS      T E
Sbjct: 915  PEAVTVVTIAPDFHGVHHGH--ITNLKKF---TAYFTSVLCFTTPGDGPPSTPQLVWTQE 969

Query: 502  GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
              PG V  L    +  ++  + W +P + NG++ GY+I ++ V G        RL +  +
Sbjct: 970  DKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQISWE-VYGRND----SRLTHTLN 1024

Query: 562  PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVIS 621
             TT   K+ GL   T Y I +A  T  G G  +     +    P ++ G    P+NLVIS
Sbjct: 1025 STTHEYKIQGLSSLTTYTIDVAAVTAVGAGLVTSST--ISSGVPPDLPG---APSNLVIS 1079



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 2/142 (1%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP N   +  + A +  V+W+P  P+S  G+ +GYK+  W E D +    ++ V   
Sbjct: 1701 PAMAPQNVQ-VTPLTASQLEVTWDPPPPESQNGNIQGYKIYYW-EADSQNETEKMKVLFL 1758

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
                  +      +K    + AFN A +GP S+     T +  PG    L    + S+  
Sbjct: 1759 PEPVVRLKNLTSHTKYLVSISAFNAAGDGPRSDPQQGRTHQAAPGAPSFLAFSEITSTTL 1818

Query: 521  YLKWVKPEQPNGVLMGYKIKYQ 542
             + W +P   NG+L GY++ Y+
Sbjct: 1819 NVSWGEPAAANGILQGYRVVYE 1840



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 100/275 (36%), Gaps = 29/275 (10%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           APYF  EP       E   +   C A G    E  W+ +   ++             +  
Sbjct: 103 APYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMRDDSELTTYSSE-------YKYI 155

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR-V 242
           I +L+K D G Y C   N +G + +      +A+     +  + +    G+  +L    +
Sbjct: 156 IPSLQKLDAGFYRCVVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVSQGRAAILNLLPI 215

Query: 243 FGAPKPEVNWIH-NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNK--------- 292
              P+P+V W     K +   R  I     L I     +D+G Y   A N+         
Sbjct: 216 TSYPRPQVTWFREGHKIIPSNRIAITLENQLVILATTTSDAGAYYVQAVNEKNGENKTSP 275

Query: 293 ---LGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSE 348
              L  A+  G+      T I   P +  V AG S  T  C A + P   LS+ W R   
Sbjct: 276 FIHLSIARDVGTPETMAPT-IVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGV 334

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            I        + S    LT++  +  D+G Y C A
Sbjct: 335 RIT-----SGLHSFGRRLTISNPTSADTGPYVCEA 364



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 10/207 (4%)

Query: 397  TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIRE 454
            T+Q P +       ++        + W P+      G+    GY+++ W       ++ +
Sbjct: 1168 TLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRSDLQSSAVAQ 1227

Query: 455  LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEAI 513
            ++ ++ E   T +++     +   ++ AFN    GP SE++   T E VP    +++ A 
Sbjct: 1228 VVSDRLEREFT-IEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRESVPSAAPENVSAE 1286

Query: 514  PLGSSAFYLKWVK-PEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAG 571
             + S+   L W   PEQ  NG+++GYKI +++ K     P   R   +    T SA LAG
Sbjct: 1287 AVSSTQILLTWASVPEQDQNGLILGYKILFRA-KDLDPEP---RSHIVRGNHTQSALLAG 1342

Query: 572  LEPSTKYRIHLAGYTKAGDGAESKYLF 598
            L     Y + +  +T+ G+G  S  L 
Sbjct: 1343 LRKFVLYELQVLAFTRIGNGVPSTPLI 1369



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 30/229 (13%)

Query: 391  EAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV--QTWTEKD 447
            E +A  T+Q VP E P + +      +   ++ W P   +SL G  +GY++  +    + 
Sbjct: 1567 ETEAVTTLQDVPGEPPGSVSATPHTTSS-VLIQWQPPRDESLNGLLQGYRIYYRELEYEA 1625

Query: 448  GEGS----IRELIVNKGESTTTEVDKFVPAS-----------KNFARVLAFNGAYN---- 488
            G G+    ++  I  + E T     K V +S           K + R      AYN    
Sbjct: 1626 GSGTEAKMLKSPIALRAELTAQSSFKTVNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGE 1685

Query: 489  GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
             P S  +     E  P    Q+++  PL +S   + W    PE  NG + GYKI Y    
Sbjct: 1686 SPASAPVEVFVGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEAD 1745

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
                   ++ L ++ +P     +L  L   TKY + ++ +  AGDG  S
Sbjct: 1746 SQNETEKMKVL-FLPEPV---VRLKNLTSHTKYLVSISAFNAAGDGPRS 1790



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 3/144 (2%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V  Q   G   GYK+  +  KD +   R  IV  
Sbjct: 1275 VPSAAPENVS-AEAVSSTQILLTWASVPEQDQNGLILGYKI-LFRAKDLDPEPRSHIVRG 1332

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-IISFVTPEGVPGTVQSLEAIPLGSS 518
              + +  +           +VLAF    NG PS  +I   T +  PG    L    +  +
Sbjct: 1333 NHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLT 1392

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQ 542
            +  + W  PE+PNG+++GY+I Y+
Sbjct: 1393 SVRIVWQPPEEPNGIILGYQIAYR 1416



 Score = 43.5 bits (101), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 88/208 (42%), Gaps = 27/208 (12%)

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFVTPEGVPGTVQ-SLEAIPLGSS 518
            E+T   VD+  P +    R+ A N   +    SE  +  T + VPG    S+ A P  +S
Sbjct: 1534 EATACVVDRLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTS 1593

Query: 519  AFYLKWVKP--EQPNGVLMGYKIKYQSVK-----GTKV----GPLLERLPYI-------- 559
            +  ++W  P  E  NG+L GY+I Y+ ++     GT+      P+  R            
Sbjct: 1594 SVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKMLKSPIALRAELTAQSSFKTV 1653

Query: 560  -SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYV----PFKNPDNVEGRGS 613
             S  T+T  +L  L+   +Y + +  Y   G+  A +    +V    P   P NV+    
Sbjct: 1654 NSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTPL 1713

Query: 614  TPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            T + L ++W   P    N     Y+I++
Sbjct: 1714 TASQLEVTWDPPPPESQNGNIQGYKIYY 1741



 Score = 40.4 bits (93), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 63/166 (37%), Gaps = 8/166 (4%)

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
           TE    +  ++G  +VLTC   G+   E  W+ +  ELT    T        I  +   D
Sbjct: 108 TEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMRDDSELT----TYSSEYKYIIPSLQKLD 163

Query: 282 SGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           +G Y C  RN++G   Q    + V       D  +   V  G++A      ++    +  
Sbjct: 164 AGFYRCVVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVSQGRAAILNLLPITS-YPRPQ 222

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + W R    I   +       N   +  T +S  D+G Y  +A  E
Sbjct: 223 VTWFREGHKIIPSNRIAITLENQLVILATTTS--DAGAYYVQAVNE 266


>gi|397498087|ref|XP_003819824.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-1 [Pan paniscus]
          Length = 2159

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 189/625 (30%), Positives = 275/625 (44%), Gaps = 44/625 (7%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
           + V   + +  L CI    P+      W ++GV      RI+ G  ++G+ L I +   +
Sbjct: 248 RSVVAGSSETTLECIASARPVEDLSVTWKRNGV------RITSGLHSFGRRLTISNPTSA 301

Query: 98  DQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPE 154
           D G Y CE +      E    +  L ++  PYFT EPE  I+A  EETV   C+A G+P 
Sbjct: 302 DTGPYVCEAALRGSAFEPARATAFLFIIEPPYFTAEPESRISAEVEETVDIGCQAMGVPL 361

Query: 155 PEIHWVHNGKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P + W  +   IS+   NPR KV     + I+ LR  D+G + C A+N  G +    Y++
Sbjct: 362 PTLQWYKDAISISRLQ-NPRYKVLASGGLRIQKLRPEDSGIFQCFASNEGGEIQTHTYLD 420

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V   AP  T+ P D    DG T +L C V GAPKP + W      L  G     R+ +LE
Sbjct: 421 VTNIAPVFTQRPVDTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLE 480

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L+I  V   D+G YTC+A N  G+   S +LTV   T I   PED+ V  G +AT  
Sbjct: 481 SGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNRTSIVHPPEDHVVIKGTTATLH 540

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A  DP + L  VW + +  +   S  R V   D SL ++++   D G Y+C   +E  
Sbjct: 541 CGATHDPRVSLRYVWKKDNVALTPSSTSRIVVEKDGSLLISQTWSGDIGDYSCEIVSEGG 600

Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV-SWNPVSPQSLRGHFRGYKVQTWTEKD 447
                A L V     +P N           AVV SW  V P         Y V+  +E +
Sbjct: 601 NDSRMARLEVIELPHSPQNLLASPNSSHSHAVVLSW--VRPFDGNSPILYYIVEL-SENN 657

Query: 448 GEGSIRELIVNKG-ESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEG 502
               +   + N G E T   V    PA     RV A N    G Y+   S ++    P  
Sbjct: 658 SPWKVH--LSNVGPEMTGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPS 715

Query: 503 VPGTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560
            P   +++ A    + +  ++W  P +   NGVL GY ++Y+ + G   G   +R   I+
Sbjct: 716 APP--KNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYR-LAGLP-GEYQQR--NIT 769

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEGRGSTP 615
            P      +  L   T+Y I +A Y  AG G  S+      L  VP   P NV+      
Sbjct: 770 SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNS 829

Query: 616 NNLVISWTAMPEIEHNAPHFKYRIF 640
             +   W   P+   N  +  Y++ 
Sbjct: 830 TTIQFLWNPPPQQFINGINQGYKLL 854



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 177/679 (26%), Positives = 266/679 (39%), Gaps = 113/679 (16%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN-GVGEAK-SYSI 118
           P PQ  W ++G  I PS+RI+       L+I     SD G+Y  +  N   GE K S  I
Sbjct: 165 PRPQVTWFREGHKIIPSNRIAI-TLENQLVILATTTSDAGAYYVQAVNEKNGENKTSPFI 223

Query: 119 DLSV--------LAAPYFTVEP--EFINAAEEETVTFECKASGLP--EPEIHWVHNGKPI 166
            LS+          AP   V P    + A   ET T EC AS  P  +  + W  NG  I
Sbjct: 224 YLSIARDVGTPETMAPTIVVPPGNRSVVAGSSET-TLECIASARPVEDLSVTWKRNGVRI 282

Query: 167 SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV---LAHAPEITE 223
           +    +  R     R+TI N   +DTG Y C A    G  ++         +   P  T 
Sbjct: 283 TSGLHSFGR-----RLTISNPTSADTGPYVCEAALR-GSAFEPARATAFLFIIEPPYFTA 336

Query: 224 APKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITDVAF 279
            P+   + +  +TV + C+  G P P + W  +      L   RY +L +G L+I  +  
Sbjct: 337 EPESRISAEVEETVDIGCQAMGVPLPTLQWYKDAISISRLQNPRYKVLASGGLRIQKLRP 396

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHI-TDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            DSG + CFA N+ G  Q    L V     + T +P D  V  G +A  RC     P  K
Sbjct: 397 EDSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRPVDTTVTDGMTAILRCEVSGAP--K 454

Query: 339 LSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            +I W R +  +   S   PRF+      L +      D+G YTC A      + A ATL
Sbjct: 455 PAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATL 514

Query: 397 TV---QVPLEAPSNFTLIQVIDA------------------KKAVVSWNPVSPQSLRGHF 435
           TV      +  P +  +I+   A                  KK  V+  P S   +    
Sbjct: 515 TVWNRTSIVHPPEDHVVIKGTTATLHCGATHDPRVSLRYVWKKDNVALTPSSTSRIVVEK 574

Query: 436 RGYKV--QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
            G  +  QTW+   G+ S    IV++G + +             AR+            E
Sbjct: 575 DGSLLISQTWSGDIGDYSCE--IVSEGGNDS-----------RMARL------------E 609

Query: 494 IISFVTPEGVPGTVQSLEAIPLG--SSAFYLKWVKPEQPNGVLMGYKIKYQ------SVK 545
           +I        P + Q+L A P    S A  L WV+P   N  ++ Y ++         V 
Sbjct: 610 VIEL------PHSPQNLLASPNSSHSHAVVLSWVRPFDGNSPILYYIVELSENNSPWKVH 663

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG---AESKYLFY--- 599
            + VGP +           T   ++GL P+  Y+  +    + G G   AE+  L     
Sbjct: 664 LSNVGPEM-----------TGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEE 712

Query: 600 VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
            P   P N+   G T  ++++ W   PE EHN     Y + +R       + Q ++    
Sbjct: 713 PPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNITSPE 772

Query: 660 QSELVLANQPTFQPYEIKV 678
            +  ++ +   +  YEI+V
Sbjct: 773 VNYCLVTDLIIWTQYEIQV 791



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 101/240 (42%), Gaps = 23/240 (9%)

Query: 389  FIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
            F  A    T+Q VP   P N    + +++      WNP   Q + G  +GYK+  W    
Sbjct: 802  FSRAVTEYTLQGVPTAPPQNVQ-TEAVNSTTIQFLWNPPPQQFINGINQGYKLLAWPADA 860

Query: 448  GEGSIRELI------VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
             E      I      V+ G    T + KF   +  F  VL F    +GPPS      T E
Sbjct: 861  PEAVTVVTIAPDFHGVHHGH--ITNLKKF---TAYFTSVLCFTTPGDGPPSTPQLVWTQE 915

Query: 502  GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
              PG V  L    +  ++  + W +P + NG++ GY+I ++ V G        RL +  +
Sbjct: 916  DKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQISWE-VYGRNDS----RLTHTLN 970

Query: 562  PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVIS 621
             TT   K+ GL   T Y I +A  T  G G  +     +    P ++ G    P+NLVIS
Sbjct: 971  STTHEYKIQGLSSLTTYTIDVAAVTAVGAGLVTSST--ISSGVPPDLPG---APSNLVIS 1025



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 2/142 (1%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP N   +  + A +  V+W+P  P+S  G+ +GYK+  W E D +    ++ V   
Sbjct: 1647 PAMAPQNVQ-VTPLTASQLEVTWDPPPPESQNGNIQGYKIYYW-EADSQNETEKMKVLFL 1704

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
                  +      +K    + AFN A +GP S+     T +  PG    L    + S+  
Sbjct: 1705 PEPVVRLKNLTSHTKYLVSISAFNAAGDGPRSDPQQGRTHQAAPGAPSFLAFSEITSTTL 1764

Query: 521  YLKWVKPEQPNGVLMGYKIKYQ 542
             + W +P   NG+L GY++ Y+
Sbjct: 1765 NVSWGEPAAANGILQGYRVVYE 1786



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 100/275 (36%), Gaps = 29/275 (10%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           APYF  EP       E   +   C A G    E  W+ +   ++             +  
Sbjct: 49  APYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMRDDSELTTYSSE-------YKYI 101

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR-V 242
           I +L+K D G Y C   N +G + +      +A+     +  + +    G+  +L    +
Sbjct: 102 IPSLQKLDAGFYRCVVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVSQGRAAILNLLPI 161

Query: 243 FGAPKPEVNWIH-NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNK--------- 292
              P+P+V W     K +   R  I     L I     +D+G Y   A N+         
Sbjct: 162 TSYPRPQVTWFREGHKIIPSNRIAITLENQLVILATTTSDAGAYYVQAVNEKNGENKTSP 221

Query: 293 ---LGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSE 348
              L  A+  G+      T I   P +  V AG S  T  C A + P   LS+ W R   
Sbjct: 222 FIYLSIARDVGTPETMAPT-IVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGV 280

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            I        + S    LT++  +  D+G Y C A
Sbjct: 281 RIT-----SGLHSFGRRLTISNPTSADTGPYVCEA 310



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 10/207 (4%)

Query: 397  TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIRE 454
            T+Q P +       ++        + W P+      G+    GY+++ W       ++ +
Sbjct: 1114 TLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRSDLQSSAVAQ 1173

Query: 455  LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEAI 513
            ++ ++ E   T +++     +   ++ AFN    GP SE++   T E VP    +++ A 
Sbjct: 1174 VVSDRLEREFT-IEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRESVPSAAPENVSAE 1232

Query: 514  PLGSSAFYLKWVK-PEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAG 571
             + S+   L W   PEQ  NG+++GYKI +++ K     P   R   +    T SA LAG
Sbjct: 1233 AVSSTQILLTWASVPEQDQNGLILGYKILFRA-KDLDPEP---RSHIVRGNHTQSALLAG 1288

Query: 572  LEPSTKYRIHLAGYTKAGDGAESKYLF 598
            L     Y + +  +T+ G+G  S  L 
Sbjct: 1289 LRKFVLYELQVLAFTRIGNGVPSTPLI 1315



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 30/229 (13%)

Query: 391  EAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV--QTWTEKD 447
            E +A  T+Q VP E P + +      +   ++ W P   +SL G  +GY++  +    + 
Sbjct: 1513 ETEAVTTLQDVPGEPPGSVSATPHTTSS-VLIQWQPPRDESLNGLLQGYRIYYRELEYEA 1571

Query: 448  GEGS----IRELIVNKGESTTTEVDKFVPAS-----------KNFARVLAFNGAYN---- 488
            G G+    ++  I  + E T     K V +S           K + R      AYN    
Sbjct: 1572 GSGTEAKMLKSPIALRAELTAQSSFKTVNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGE 1631

Query: 489  GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
             P S  +     E  P    Q+++  PL +S   + W    PE  NG + GYKI Y    
Sbjct: 1632 SPASAPVEVFVGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEAD 1691

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
                   ++ L ++ +P     +L  L   TKY + ++ +  AGDG  S
Sbjct: 1692 SQNETEKMKVL-FLPEPV---VRLKNLTSHTKYLVSISAFNAAGDGPRS 1736



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 3/144 (2%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V  Q   G   GYK+  +  KD +   R  IV  
Sbjct: 1221 VPSAAPENVS-AEAVSSTQILLTWASVPEQDQNGLILGYKI-LFRAKDLDPEPRSHIVRG 1278

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-IISFVTPEGVPGTVQSLEAIPLGSS 518
              + +  +           +VLAF    NG PS  +I   T +  PG    L    +  +
Sbjct: 1279 NHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLT 1338

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQ 542
            +  + W  PE+PNG+++GY+I Y+
Sbjct: 1339 SVRIVWQPPEEPNGIILGYQIAYR 1362



 Score = 43.9 bits (102), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 88/208 (42%), Gaps = 27/208 (12%)

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFVTPEGVPGTVQ-SLEAIPLGSS 518
            E+T   VD+  P +    R+ A N   +    SE  +  T + VPG    S+ A P  +S
Sbjct: 1480 EATACVVDRLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTS 1539

Query: 519  AFYLKWVKP--EQPNGVLMGYKIKYQSVK-----GTKV----GPLLERLPYI-------- 559
            +  ++W  P  E  NG+L GY+I Y+ ++     GT+      P+  R            
Sbjct: 1540 SVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKMLKSPIALRAELTAQSSFKTV 1599

Query: 560  -SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYV----PFKNPDNVEGRGS 613
             S  T+T  +L  L+   +Y + +  Y   G+  A +    +V    P   P NV+    
Sbjct: 1600 NSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTPL 1659

Query: 614  TPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            T + L ++W   P    N     Y+I++
Sbjct: 1660 TASQLEVTWDPPPPESQNGNIQGYKIYY 1687



 Score = 40.0 bits (92), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 63/166 (37%), Gaps = 8/166 (4%)

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
           TE    +  ++G  +VLTC   G+   E  W+ +  ELT    T        I  +   D
Sbjct: 54  TEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMRDDSELT----TYSSEYKYIIPSLQKLD 109

Query: 282 SGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           +G Y C  RN++G   Q    + V       D  +   V  G++A      ++    +  
Sbjct: 110 AGFYRCVVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVSQGRAAILNLLPITS-YPRPQ 168

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + W R    I   +       N   +  T +S  D+G Y  +A  E
Sbjct: 169 VTWFREGHKIIPSNRIAITLENQLVILATTTS--DAGAYYVQAVNE 212


>gi|45383994|ref|NP_990597.1| neuronal cell adhesion molecule precursor [Gallus gallus]
 gi|63707|emb|CAA41391.1| Nr-CAM protein [Gallus gallus]
          Length = 1268

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 162/528 (30%), Positives = 242/528 (45%), Gaps = 48/528 (9%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           +V LR   + L CI  G P P   W K+G  + P++R    N+ K+L I  V  +D G+Y
Sbjct: 256 KVELRGNVLLLECIAAGLPTPVIRWIKEGGEL-PANRTFFENFKKTLKIIDVSEADSGNY 314

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C   N +G +  + I ++V AAPY+   P  +  +  E  T  C+A+G P+P I W+ N
Sbjct: 315 KCTARNTLG-STHHVISVTVKAAPYWITAPRNLVLSPGEDGTLICRANGNPKPSISWLTN 373

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI- 221
           G PI+ AP +P RKV  + I    +++  +  Y CNA+N  GY+  + +VNVLA  P I 
Sbjct: 374 GVPIAIAPEDPSRKVDGDTIIFSAVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRIL 433

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAF 279
           T A K    +     ++ C  FG+PKPE+ W    K   L G  Y   + G L+I     
Sbjct: 434 TPANKLYQVIADSPALIDCAYFGSPKPEIEWFRGVKGSILRGNEYVFHDNGTLEIPVAQK 493

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
             +G YTC ARNKLG  Q    L VK+ T I  QP+   ++    A+F C    DP+L  
Sbjct: 494 DSTGTYTCVARNKLGKTQNEVQLEVKDPTMIIKQPQYKVIQRSAQASFECVIKHDPTLIP 553

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           +++WL+ +   +   + RF+   D +LT+   ++ D G YTC   T LD + A A LTV 
Sbjct: 554 TVIWLKDNN--ELPDDERFLVGKD-NLTIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVV 610

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGS-IRELIVN 458
                P+      +I A+      NP     L G        +W   +   S I   ++ 
Sbjct: 611 AAPPTPA------IIYARP-----NPPLDLELTGQLERSIELSWVPGEENNSPITNFVIE 659

Query: 459 -----------------KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IIS 496
                             G  TT ++ K  P      RV+A N      PSE     +  
Sbjct: 660 YEDGLHEPGVWHYQTEVPGSHTTVQL-KLSPYVNYSFRVIAVNEIGRSQPSEPSEQYLTK 718

Query: 497 FVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQ 542
              P+  P  VQ + + P       + W  +K  Q NG  + YK+ ++
Sbjct: 719 SANPDENPSNVQGIGSEP---DNLVITWESLKGFQSNGPGLQYKVSWR 763



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 167/671 (24%), Positives = 266/671 (39%), Gaps = 91/671 (13%)

Query: 59  GTPLPQTIWSKDGVPINP-SDRISQGNYGKSLIIKHVEFSD-QGSYTC--EVSNGVGEAK 114
           G P P   W  +     P S+R+SQG  G  L   +V+  D +  Y C    ++     +
Sbjct: 167 GLPPPIIFWMDNAFQRLPQSERVSQGLNG-DLYFSNVQPEDTRVDYICYARFNHTQTIQQ 225

Query: 115 SYSIDLSVLAAPYFTVEPEFI--------NAAEEE--TVTFECKASGLPEPEIHWVHNGK 164
              I + V +    T  P  +        N  E     +  EC A+GLP P I W+  G 
Sbjct: 226 KQPISVKVFSTKPVTERPPVLLTPMGSTSNKVELRGNVLLLECIAAGLPTPVIRWIKEGG 285

Query: 165 PISQAPPNPRRKVGPNRITIENLRKS---------DTGNYGCNATNSLGYVYKDVYVNVL 215
                      ++  NR   EN +K+         D+GNY C A N+LG  +  + V V 
Sbjct: 286 -----------ELPANRTFFENFKKTLKIIDVSEADSGNYKCTARNTLGSTHHVISVTVK 334

Query: 216 AHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD---L 272
           A AP    AP++     G+   L CR  G PKP ++W+ N   +           D   +
Sbjct: 335 A-APYWITAPRNLVLSPGEDGTLICRANGNPKPSISWLTNGVPIAIAPEDPSRKVDGDTI 393

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED--YEVEAGQSATFRCN 330
             + V    S  Y C A N+ G    +  + V         P +  Y+V A   A   C 
Sbjct: 394 IFSAVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPANKLYQVIADSPALIDCA 453

Query: 331 AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
               P  K  I W RG +         +V  ++ +L +  + +  +G YTC A+ +L   
Sbjct: 454 YFGSP--KPEIEWFRGVKGSILRGN-EYVFHDNGTLEIPVAQKDSTGTYTCVARNKLGKT 510

Query: 391 EAQATLTVQVP---LEAPSNFTLIQVIDAK-KAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
           + +  L V+ P   ++ P    + +   A  + V+  +P    ++           W + 
Sbjct: 511 QNEVQLEVKDPTMIIKQPQYKVIQRSAQASFECVIKHDPTLIPTV----------IWLKD 560

Query: 447 DGE---------GSIRELIVN---KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
           + E         G     I+N   K + T T +      S + + VL    A   PP+  
Sbjct: 561 NNELPDDERFLVGKDNLTIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVVAA---PPTPA 617

Query: 495 ISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQS-VKGTKVGPLL 553
           I +  P         LE       +  L WV  E+ N  +  + I+Y+  +    V    
Sbjct: 618 IIYARP----NPPLDLELTGQLERSIELSWVPGEENNSPITNFVIEYEDGLHEPGVWHYQ 673

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES----KYLFYV--PFKNPDN 607
             +P     TT   KL+   P   Y   +    + G    S    +YL     P +NP N
Sbjct: 674 TEVP--GSHTTVQLKLS---PYVNYSFRVIAVNEIGRSQPSEPSEQYLTKSANPDENPSN 728

Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667
           V+G GS P+NLVI+W ++   + N P  +Y++ WR+ +  + W    V+    S+ +++ 
Sbjct: 729 VQGIGSEPDNLVITWESLKGFQSNGPGLQYKVSWRQKDVDDEWTS--VVVANVSKYIVSG 786

Query: 668 QPTFQPYEIKV 678
            PTF PYEIKV
Sbjct: 787 TPTFVPYEIKV 797



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 140/591 (23%), Positives = 239/591 (40%), Gaps = 79/591 (13%)

Query: 55   CIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
            C + G+P P+  W +   G  +  ++ +   N   +L I   +    G+YTC   N +G+
Sbjct: 452  CAYFGSPKPEIEWFRGVKGSILRGNEYVFHDN--GTLEIPVAQKDSTGTYTCVARNKLGK 509

Query: 113  AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPE--PEIHWVHNGKPISQAP 170
             ++  + L V        +P++         +FEC     P   P + W+ +    ++ P
Sbjct: 510  TQN-EVQLEVKDPTMIIKQPQYKVIQRSAQASFECVIKHDPTLIPTVIWLKDN---NELP 565

Query: 171  PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP----------- 219
             + R  VG + +TI N+   D G Y C    +L  V     + V+A  P           
Sbjct: 566  DDERFLVGKDNLTIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVVAAPPTPAIIYARPNP 625

Query: 220  --------------EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
                          E++  P +E        V+     G  +P V W H Q E+ G   T
Sbjct: 626  PLDLELTGQLERSIELSWVPGEENNSPITNFVIEYE-DGLHEPGV-W-HYQTEVPGSHTT 682

Query: 266  ILETGDLKITDVAFADSGEYTCFARNKLGTAQGS--------GSLTVKEHTH----ITDQ 313
            +     LK++      +  +   A N++G +Q S         S    E+      I  +
Sbjct: 683  V----QLKLSPYV---NYSFRVIAVNEIGRSQPSEPSEQYLTKSANPDENPSNVQGIGSE 735

Query: 314  PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            P++  +       F+ N    P L+  + W +     ++ S    V +N     V+ +  
Sbjct: 736  PDNLVITWESLKGFQSNG---PGLQYKVSWRQKDVDDEWTS---VVVANVSKYIVSGTPT 789

Query: 374  LDSGQYTCRAQTELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQ 429
                +   +A  +L +    + +       +P+ AP N   + VI++  A V W+PV  +
Sbjct: 790  FVPYEIKVQALNDLGYAPEPSEVIGHSGEDLPMVAPGNVQ-VHVINSTLAKVHWDPVPLK 848

Query: 430  SLRGHFRGYKVQTW-----TEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN 484
            S+RGH +GYKV  W     + +      ++++  +G  T   +    P S     V   N
Sbjct: 849  SVRGHLQGYKVYYWKVQSLSRRSKRHVEKKILTFRGNKTFGMLPGLEPYSSYKLNVRVVN 908

Query: 485  GAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
            G   GP S    F TPEGVP     L+       +  L+W  P  PNGVL  Y +K+Q +
Sbjct: 909  GKGEGPASPDKVFKTPEGVPSPPSFLKITNPTLDSLTLEWGSPTHPNGVLTSYILKFQPI 968

Query: 545  KGT-KVGPLLE-RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
              T ++GPL+E R+P       +S  L  L  ST+Y+ +    T  G G++
Sbjct: 969  NNTHELGPLVEIRIPA----NESSLILKNLNYSTRYKFYFNAQTSVGSGSQ 1015



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 148/616 (24%), Positives = 223/616 (36%), Gaps = 81/616 (13%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P   W  +GVPI     +PS ++     G ++I   V+      Y C  S
Sbjct: 356 LICRANGNPKPSISWLTNGVPIAIAPEDPSRKVD----GDTIIFSAVQERSSAVYQCNAS 411

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P  +      +     +C   G P+PEI W   G  
Sbjct: 412 NEYGYLLANAF-VNVLAEPPRILTPANKLYQVIADSPALIDCAYFGSPKPEIEWFR-GVK 469

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
            S    N         + I   +K  TG Y C A N LG    +V + V      I + P
Sbjct: 470 GSILRGNEYVFHDNGTLEIPVAQKDSTGTYTCVARNKLGKTQNEVQLEV-KDPTMIIKQP 528

Query: 226 KDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRYTILETGDLKITDVAFADSG 283
           + +           C +   P   P V W+ +  EL      ++   +L I +V   D G
Sbjct: 529 QYKVIQRSAQASFECVIKHDPTLIPTVIWLKDNNELPDDERFLVGKDNLTIMNVTDKDDG 588

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVW 343
            YTC     L +   S  LTV     +   P    + A  +              + + W
Sbjct: 589 TYTCIVNTTLDSVSASAVLTV-----VAAPPTPAIIYARPNPPLDLELTGQLERSIELSW 643

Query: 344 LRGSE---PI--------DFESEP------------------RFVQSNDYSLTVTKSSEL 374
           + G E   PI        D   EP                  +     +YS  V   +E+
Sbjct: 644 VPGEENNSPITNFVIEYEDGLHEPGVWHYQTEVPGSHTTVQLKLSPYVNYSFRVIAVNEI 703

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
              Q    ++    ++   A      P E PSN   I   +    V++W  +      G 
Sbjct: 704 GRSQ---PSEPSEQYLTKSAN-----PDENPSNVQGIGS-EPDNLVITWESLKGFQSNGP 754

Query: 435 FRGYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNG-AYNGPPS 492
              YKV +W +KD +     ++V N  +   +    FVP      +V A N   Y   PS
Sbjct: 755 GLQYKV-SWRQKDVDDEWTSVVVANVSKYIVSGTPTFVPYE---IKVQALNDLGYAPEPS 810

Query: 493 EIISFV---TPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT 547
           E+I       P   PG VQ      + S+   + W  V  +   G L GYK+ Y  V+  
Sbjct: 811 EVIGHSGEDLPMVAPGNVQ---VHVINSTLAKVHWDPVPLKSVRGHLQGYKVYYWKVQSL 867

Query: 548 --KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
             +    +E+         T   L GLEP + Y++++      G+G  S       FK P
Sbjct: 868 SRRSKRHVEKKILTFRGNKTFGMLPGLEPYSSYKLNVRVVNGKGEGPASPDKV---FKTP 924

Query: 606 DNVEGRGSTPNNLVIS 621
              EG  S P+ L I+
Sbjct: 925 ---EGVPSPPSFLKIT 937



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 122/296 (41%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS---QAPPNPRRKVGPNRITIENLRKSDT--GNY 195
           E +  +C+A G P P   W  NG        A    +   G   + I N  K++   G Y
Sbjct: 57  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDAQVTMKPNSGTLVVNIMNGVKAEAYEGVY 116

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEIT-EAPKDEYTVDGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +  V   + +P  T E  +  +  +G ++VL CR   G P P + W+
Sbjct: 117 QCTARNERGAAISNNIVIRPSRSPLWTKEKLEPNHVREGDSLVLNCRPPVGLPPPIIFWM 176

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSG-EYTCFAR-NKLGTAQGSGSLTVKEHTH 309
            N  Q+     R +    GDL  ++V   D+  +Y C+AR N   T Q    ++VK  + 
Sbjct: 177 DNAFQRLPQSERVSQGLNGDLYFSNVQPEDTRVDYICYARFNHTQTIQQKQPISVKVFST 236

Query: 310 --ITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             +T++P       G ++             C A   P+    I W++  E  +  +   
Sbjct: 237 KPVTERPPVLLTPMGSTSNKVELRGNVLLLECIAAGLPT--PVIRWIK--EGGELPANRT 292

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
           F ++   +L +   SE DSG Y C A+  L       ++TV+     + AP N  L
Sbjct: 293 FFENFKKTLKIIDVSEADSGNYKCTARNTLGSTHHVISVTVKAAPYWITAPRNLVL 348


>gi|392352344|ref|XP_003751180.1| PREDICTED: protein sidekick-1-like [Rattus norvegicus]
          Length = 1980

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 191/639 (29%), Positives = 274/639 (42%), Gaps = 38/639 (5%)

Query: 25  SASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQ 82
           + +Q   AP        + V   + +  L CI    P+ +    W ++GV      R++ 
Sbjct: 61  TGTQEAMAPVIVVAPGNRSVVAGSSETTLECIANARPVEELSVHWKRNGV------RLTS 114

Query: 83  G--NYGKSLIIKHVEFSDQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEF-INA 137
           G  +YG+ L I +   +D G Y CE +      E       LS++  PYFT EPE  I  
Sbjct: 115 GLHSYGRRLTIINPTSADTGMYVCEATLRGSAFEPARAKAFLSIIEPPYFTAEPESRILG 174

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYG 196
             EETV   C+A G+P P + W  +  P+S+   NPR +V P+  + I+ L   D+G + 
Sbjct: 175 EVEETVDIPCRAMGVPLPTLQWYKDAVPLSKLQ-NPRYRVLPSGGLHIQKLSPEDSGIFQ 233

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A N  G +    Y++V   AP  T+ P D    DG T VL C V GAPKP + W    
Sbjct: 234 CFANNEGGEIQTHTYLDVTNIAPAFTQRPVDTTVTDGMTAVLRCEVSGAPKPAITWKKGN 293

Query: 257 KELTGG-----RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT 311
             L  G     R+ +LE+G L+I  V   D+G Y C+A N   +   S  LTV   T I 
Sbjct: 294 HILASGSVRIPRFMLLESGGLRIAPVFIQDAGNYACYATNTEASVNASAMLTVWNRTSIV 353

Query: 312 DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKS 371
             PED  V  G +AT  C A  DP   L  VW + +  I   S  R V   D SL ++++
Sbjct: 354 HPPEDRVVIKGTTATLCCGATHDPRTSLRYVWKKDNAVITPSSSSRIVVEKDGSLVISQT 413

Query: 372 SELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
              D G YTC   +E       A L V + L  P    L  +  A+   V+ + V P   
Sbjct: 414 WSGDIGDYTCEIVSEGGNDSRTARLEV-IELPHPPQNLLASLSSARSHSVTLSWVRPFDG 472

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKG-ESTTTEVDKFVPASKNFARVLAFNGAYNGP 490
                 Y VQ  +E +    +   + N G E     V    PA     RV A N    G 
Sbjct: 473 NSPVLYYIVQV-SENNSPWKVH--LSNVGPEMAGVTVSGLTPARTYQFRVCAVNQVGKGQ 529

Query: 491 PS-EIISFVTPEGVPGT-VQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKG 546
            S E    + PE  P    +++ A    + +  ++W  P +   NGVL GY ++Y+ + G
Sbjct: 530 YSTETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYR-LAG 588

Query: 547 TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVP 601
               P   +   IS P      +  L   T+Y I +A Y  AG G  S+      L  VP
Sbjct: 589 L---PGEHQQRNISSPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVP 645

Query: 602 FKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
              P NV+        +   W   P+   N  +  Y++ 
Sbjct: 646 TAPPQNVQAEAVNSTTVHFLWNPPPQQFINGINQGYKLL 684



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 12/160 (7%)

Query: 391  EAQATLTVQV------PLEAPSNFTLIQV--IDAKKAVVSWNPVSPQSLRGHFRGYKVQT 442
            E+ A++ V+V      P  AP N   IQV  + A +  V+W+P  P+S  G+ +GYKV  
Sbjct: 1454 ESPASVPVEVFVGEAAPAMAPQN---IQVTPLTASQLEVTWDPPPPESQNGNIQGYKVYY 1510

Query: 443  WTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 502
            W E D      ++ V        ++      +K    + AFN A +GP S+     T + 
Sbjct: 1511 W-EADSRNETEKMKVLFLPEPVVKIKDLTSHTKYLVSISAFNAAGDGPRSDPCQGRTHQA 1569

Query: 503  VPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
             PG    LE   + S+   + W +P   NG+L GY++ Y+
Sbjct: 1570 APGPPSFLEFSEITSTTLNVSWGEPSAANGILQGYRVVYE 1609



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 98/238 (41%), Gaps = 20/238 (8%)

Query: 389 FIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
           F  A    T+Q VP   P N    + +++      WNP   Q + G  +GYK+  W    
Sbjct: 632 FSRAVTEYTLQGVPTAPPQNVQ-AEAVNSTTVHFLWNPPPQQFINGINQGYKLLAWPADA 690

Query: 448 GEGSIRELIVNKGEST----TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGV 503
            E      I      T     T + KF   +  F  VL F    +GPPS      T E  
Sbjct: 691 PETVTAVTIAPDFHGTHHGYITNLKKF---TAYFTSVLCFTTPGDGPPSTPQLVWTHEDR 747

Query: 504 PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
           PG V  L    +  ++  + W +P + NG++ GY+I ++       G    RL +  + T
Sbjct: 748 PGAVGHLSFTEILDTSLKVSWQEPLERNGIITGYQISWEV-----YGRNDSRLTHTLNST 802

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVIS 621
           T   K+ GL   T Y I  A  T AG G  +     +    P ++ G    P+NLVIS
Sbjct: 803 THEYKIQGLSSLTTYTIX-AAMTTAGVGLTTSST--ISSGVPPDLPG---APSNLVIS 854



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 12/208 (5%)

Query: 397  TVQVPLE-APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIR 453
            T+Q P + AP++ T ++        + W P+      G+    GY+V+ W       ++ 
Sbjct: 943  TLQAPPDVAPTSLT-VRTASETSLRLRWVPLPDSQYNGNPESVGYRVKYWRSDQPSSALA 1001

Query: 454  ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVP-GTVQSLEA 512
            +++ ++ E   T +++    ++   R+ AFN    GP SE++   T E VP  + +++ A
Sbjct: 1002 QVVNDRLERELT-IEELEEWTEYELRMQAFNAIGAGPWSELVRGRTRESVPSASPENVSA 1060

Query: 513  IPLGSSAFYLKWVK-PEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
              + S+   L W   PEQ  NG+++GYK+ Y++ K     P   R   +    T SA LA
Sbjct: 1061 EAVSSTQILLTWASVPEQDQNGLILGYKVLYRA-KDLDPEP---RSHVVRGNHTQSALLA 1116

Query: 571  GLEPSTKYRIHLAGYTKAGDGAESKYLF 598
            GL     Y + +  +T+ G+G  S  L 
Sbjct: 1117 GLRKFVVYELQVLAFTRIGNGVPSSPLI 1144



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 21/200 (10%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  +P N +  + + + + +++W  V  Q   G   GYKV  +  KD +   R  +V  
Sbjct: 1050 VPSASPENVS-AEAVSSTQILLTWASVPEQDQNGLILGYKV-LYRAKDLDPEPRSHVVRG 1107

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNG-PPSEIISFVTPEGVPGTVQSLEAIPLGSS 518
              + +  +           +VLAF    NG P S +I   T +  PG    L    +  +
Sbjct: 1108 NHTQSALLAGLRKFVVYELQVLAFTRIGNGVPSSPLILERTKDDTPGPPVRLVFPEVRLT 1167

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGT-------KVGPLLERLPYISDPTTTSAKLAG 571
            A  + W  PE+PNGV++GY+I Y+   G+       +VG  + +         T+ +LA 
Sbjct: 1168 AVRIVWQPPEEPNGVILGYQIAYRLASGSPHTFTTVEVGATVRQF--------TATELA- 1218

Query: 572  LEPSTKYRIHLAGYTKAGDG 591
              P + Y   L+  T+ G G
Sbjct: 1219 --PESAYIFRLSAKTRQGWG 1236



 Score = 47.4 bits (111), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 33/234 (14%)

Query: 388  DF-IEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE 445
            DF  E +A  T+Q VP E P + +      +   ++ W P   +SL G  +GY++  + E
Sbjct: 1332 DFSAETEAVTTLQDVPGEPPGSVSATPHTTSS-VLIQWQPPRDESLNGLLQGYRIY-YRE 1389

Query: 446  KDGE-------GSIRELIVNKGESTTTEVDKFVPAS-----------KNFARVLAFNGAY 487
             + E        +++     + E T     K V +S           K + R      AY
Sbjct: 1390 LESETGLSPEPKTLKSPSALRAELTAQSSFKTVNSSSTLTTYELTHLKKYRRYEVIMTAY 1449

Query: 488  N----GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIK 540
            N     P S  +     E  P    Q+++  PL +S   + W    PE  NG + GYK+ 
Sbjct: 1450 NIIGESPASVPVEVFVGEAAPAMAPQNIQVTPLTASQLEVTWDPPPPESQNGNIQGYKVY 1509

Query: 541  YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y           ++ L ++ +P     K+  L   TKY + ++ +  AGDG  S
Sbjct: 1510 YWEADSRNETEKMKVL-FLPEPV---VKIKDLTSHTKYLVSISAFNAAGDGPRS 1559


>gi|149051180|gb|EDM03353.1| rCG62174, isoform CRA_b [Rattus norvegicus]
          Length = 1250

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 159/512 (31%), Positives = 236/512 (46%), Gaps = 24/512 (4%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           LR   + L CI  G P P   W K+   + P +R    N+ K+L I HV  +D G+Y C 
Sbjct: 236 LRGNVLSLECIAEGLPTPVIYWIKEDGTL-PVNRTFYRNFKKTLQIIHVSEADSGNYQCI 294

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             N +G A  ++I ++V AAPY+ V P  +  +  E  T  C+A+G P+P I W+ NG P
Sbjct: 295 AKNALG-AVHHTISVTVKAAPYWIVAPHNLVLSPGENGTLICRANGNPKPRISWLTNGVP 353

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +  A  +P RK+  + I   N+++S +  Y CNA+N  GY+  + +VNVLA  P I  + 
Sbjct: 354 VEIALDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILTSA 413

Query: 226 KDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFADS 282
              Y V   +  +L C  FG+P P + W    K   L    Y + + G L+I       +
Sbjct: 414 NTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALHEDIYVLHDNGTLEIPVAQKDST 473

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC ARNKLG A+    L +K+ T    QPE   V+ G   +F C    D +L  +I+
Sbjct: 474 GTYTCVARNKLGMAKNEVHLEIKDPTRFIKQPEYAVVQRGSKVSFECKVKHDHTLIPTIL 533

Query: 343 WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPL 402
           WL+ +   +  ++ RF    D+ L V+   + D G YTC A T LD + A A L V    
Sbjct: 534 WLKDNG--ELPNDERFSVDKDH-LVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVDVP 590

Query: 403 EAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGES 462
             P +  L   +D K   ++W P    +       + ++        G  R      G  
Sbjct: 591 NPPFDLELTNQLD-KSVQLTWTPGDDNN--SPITKFIIEYEDAMHEAGLWRHQAEVSGTQ 647

Query: 463 TTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPGTVQSLEAIPLGS 517
           TT ++ K  P      RV+A N      PSE     +     P+  P  V+ L   P   
Sbjct: 648 TTAQL-KLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEGLGTEP--- 703

Query: 518 SAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
               + W KP    Q NG  + YK+ ++   G
Sbjct: 704 DNLVITW-KPLNGFQSNGPGLQYKVSWRQKDG 734



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 137/553 (24%), Positives = 235/553 (42%), Gaps = 46/553 (8%)

Query: 143 VTFECKASGLPEPEIHWVHNGK--PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
           ++ EC A GLP P I+W+      P+++      +K     + I ++ ++D+GNY C A 
Sbjct: 241 LSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKKT----LQIIHVSEADSGNYQCIAK 296

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QKE 258
           N+LG V+  + V V A AP    AP +     G+   L CR  G PKP ++W+ N    E
Sbjct: 297 NALGAVHHTISVTVKA-APYWIVAPHNLVLSPGENGTLICRANGNPKPRISWLTNGVPVE 355

Query: 259 LTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPE 315
           +     +    GD +  ++V  + S  Y C A NK G    +  + V       +T    
Sbjct: 356 IALDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILTSANT 415

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
            Y+V A + A   C     P    +I W +G++      E  +V  ++ +L +  + +  
Sbjct: 416 LYQVIANRPALLDCAFFGSP--MPTIEWFKGTKGSALH-EDIYVLHDNGTLEIPVAQKDS 472

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q    + + VS+       ++
Sbjct: 473 TGTYTCVARNKLGMAKNEVHLEIKDPTRFIKQPE-YAVVQ----RGSKVSFE----CKVK 523

Query: 433 GHFRGYKVQTWTEKDGEGSIRE-LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                     W + +GE    E   V+K     ++V      +   A     +       
Sbjct: 524 HDHTLIPTILWLKDNGELPNDERFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSV---SA 580

Query: 492 SEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP 551
           S ++  V    VP     LE       +  L W   +  N  +  + I+Y+         
Sbjct: 581 SAVLRVVD---VPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYED--AMHEAG 635

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV--PFKNP 605
           L      +S  T T+A+L  L P   Y   +      G      A  +YL     P +NP
Sbjct: 636 LWRHQAEVSG-TQTTAQLK-LSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNP 693

Query: 606 DNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVL 665
             VEG G+ P+NLVI+W  +   + N P  +Y++ WR+ +  + W    V+    S+ ++
Sbjct: 694 TAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTS--VVVANVSKYIV 751

Query: 666 ANQPTFQPYEIKV 678
           +  PTF PY IKV
Sbjct: 752 SGTPTFVPYLIKV 764



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 96/201 (47%), Gaps = 12/201 (5%)

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
           +P+ AP N   + V+++  A   W+PV P+S+RGH +GY++  W  +      R  I  K
Sbjct: 787 LPMVAPGNVR-VSVVNSTLAEAHWDPVPPKSVRGHLQGYRIYYWKAQSSSKRNRRHIEKK 845

Query: 460 -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 846 ILTFQGSKTHGMLPGLQPYSHYVLNVRVVNGKGEGPASADRGFHTPEGVPSAPSSLKIVN 905

Query: 515 LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
               +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 906 PTLDSLTLEWDPPSHPNGILTEYILKYQPINSTHELGPLVDLKIP----ANKTRWTLKNL 961

Query: 573 EPSTKYRIHLAGYTKAGDGAE 593
             ST+Y+ +    T  G G++
Sbjct: 962 NFSTRYKFYFYAQTSVGSGSQ 982


>gi|296488521|tpg|DAA30634.1| TPA: neuronal cell adhesion molecule isoform 1 [Bos taurus]
          Length = 1302

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 194/373 (52%), Gaps = 14/373 (3%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEF 96
           +RK+E  LR   + L CI  G P P   W K DG +PIN   R    N+ K+L I  V  
Sbjct: 278 SRKEE--LRGNVLSLECIAEGLPTPIIYWIKEDGTLPIN---RTFYRNFKKTLQIVQVTE 332

Query: 97  SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           +D G+Y C   N +G A  ++I ++V AAPY+ + P+ +  + EE  T  C+A+G P+P 
Sbjct: 333 ADSGNYQCIAKNALG-AIHHTISVTVKAAPYWIIAPQNLVLSPEEDGTLICRANGNPKPR 391

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           I W+ NG PI  AP +P RK+  + I    +++  +  Y CNA+N  GY+  + +VNVLA
Sbjct: 392 ISWLSNGVPIEIAPDDPSRKIDGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLA 451

Query: 217 HAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLK 273
             P I  +    Y V   +  +L C  FG+P P + W    K   L    Y + E G L+
Sbjct: 452 EPPRILTSANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALREDIYVLHENGTLE 511

Query: 274 ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVS 333
           I       +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G + +F C    
Sbjct: 512 IPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDPTRIIKQPEYAVVQRGSTVSFECKVKH 571

Query: 334 DPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393
           D +L  +++WL+     +  ++ RF    D  L V   ++ D G YTC A T LD + A 
Sbjct: 572 DHTLIPTVMWLKDHG--ELPNDGRFTVDKD-RLVVADVNDDDGGTYTCVANTTLDNVSAS 628

Query: 394 ATLTVQVPLEAPS 406
           A L+V  P   P+
Sbjct: 629 AVLSVVAPTPTPA 641



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 143/564 (25%), Positives = 233/564 (41%), Gaps = 58/564 (10%)

Query: 143 VTFECKASGLPEPEIHWVHNGK--PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
           ++ EC A GLP P I+W+      PI++      +K     + I  + ++D+GNY C A 
Sbjct: 288 LSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKKT----LQIVQVTEADSGNYQCIAK 343

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK--E 258
           N+LG ++  + V V A AP    AP++      +   L CR  G PKP ++W+ N    E
Sbjct: 344 NALGAIHHTISVTVKA-APYWIIAPQNLVLSPEEDGTLICRANGNPKPRISWLSNGVPIE 402

Query: 259 LTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPE 315
           +     +    GD  I + V    S  Y C A N+ G    +  + V       +T    
Sbjct: 403 IAPDDPSRKIDGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTSANT 462

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
            Y+V A + A   C     P    +I W +G++      E  +V   + +L +  + +  
Sbjct: 463 LYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALR-EDIYVLHENGTLEIPVAQKDS 519

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           +G YTC A+ +L   +    L ++ P   ++ P  + ++Q    + + VS+       ++
Sbjct: 520 TGTYTCVARNKLGMAKNDVHLEIKDPTRIIKQPE-YAVVQ----RGSTVSFE----CKVK 570

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN-----FARVLAFNGAY 487
                     W +  GE      + N G  T  + D+ V A  N         +A     
Sbjct: 571 HDHTLIPTVMWLKDHGE------LPNDGRFTVDK-DRLVVADVNDDDGGTYTCVANTTLD 623

Query: 488 NGPPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIK 540
           N   S ++S V P   P  +  +   P           +  L W   +  N  +  + I+
Sbjct: 624 NVSASAVLSVVAPTPTPAPIYDVPNPPFDLELTDQLDRSVQLSWTPGDDNNSPITKFIIE 683

Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKY 596
           Y+        P L         T T+A+L  L P   Y   +      G      A  +Y
Sbjct: 684 YEDAMHE---PGLWHHQTEVPGTQTTAQLK-LSPYVNYSFRVMAENNLGRSLPSEASEQY 739

Query: 597 LFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
           L     P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W    
Sbjct: 740 LTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS-- 797

Query: 655 VLDWRQSELVLANQPTFQPYEIKV 678
           V+    S+ +++  PTF PY IKV
Sbjct: 798 VVVANVSKYIVSGTPTFVPYLIKV 821



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 96/201 (47%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A V W+PV  +S+RGH +GY++  W  +      R  I  K
Sbjct: 844  LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRNRRHIEKK 902

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 903  ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDKVFNTPEGVPSAPSSLKIVN 962

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 963  PTLDSLTLEWEPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIP----ANKTRWILKNL 1018

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T AG G +
Sbjct: 1019 NFSTRYKFYFYAQTAAGSGIQ 1039



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 146/608 (24%), Positives = 226/608 (37%), Gaps = 67/608 (11%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I   V+      Y C  S
Sbjct: 380 LICRANGNPKPRISWLSNGVPIEIAPDDPSRKID----GDTIIFSKVQERSSAVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T                +C   G P P I W    K 
Sbjct: 436 NEYGYLLANAF-VNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 493

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K  TG Y C A N LG    DV++ +      I + 
Sbjct: 494 -GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPTRIIKQ 551

Query: 225 PKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P+      G TV   C+V       P V W+ +  EL   GR+T+ +   L + DV   D
Sbjct: 552 PEYAVVQRGSTVSFECKVKHDHTLIPTVMWLKDHGELPNDGRFTV-DKDRLVVADVNDDD 610

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G YTC A   L     S  L+V     +   P    +    +  F           + +
Sbjct: 611 GGTYTCVANTTLDNVSASAVLSV-----VAPTPTPAPIYDVPNPPFDLELTDQLDRSVQL 665

Query: 342 VWLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQA 394
            W  G +   PI     E E    +   +           + Q          F + A+ 
Sbjct: 666 SWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVPGTQTTAQLKLSPYVNYSFRVMAEN 725

Query: 395 TLTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQ 441
            L   +P EA   +           T ++ + ++    V++W P++     G    YKV 
Sbjct: 726 NLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV- 784

Query: 442 TWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFV- 498
           +W +KDG+     ++V N  +   +    FVP      +V A N A   P P+ ++    
Sbjct: 785 SWRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDAGFAPEPAAVMGHSG 841

Query: 499 --TPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKG--TKVGPL 552
              P   PG V+      + S+   + W  V  +   G L GY+I Y   +   T+    
Sbjct: 842 EDLPMVAPGNVR---VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRNRRH 898

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRG 612
           +E+       + T   L GLEP + Y +++      G+G  S      P K  +  EG  
Sbjct: 899 IEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPAS------PDKVFNTPEGVP 952

Query: 613 STPNNLVI 620
           S P++L I
Sbjct: 953 SAPSSLKI 960



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 123/315 (39%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   +TI  +   K++T  G Y
Sbjct: 62  ENIVIQCEAKGKPSPSFSWTRNGTHFDIDKDPLVTMKPGSGTLTINIMSEGKAETYEGVY 121

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVN-WI 253
            C A N  G    +  V   + +P  T+   +   + +G+++VL CR      P +  W+
Sbjct: 122 QCTARNERGAAISNNIVIRPSRSPLWTKEKLEPIILRNGQSLVLPCRPPIGLPPPIIFWM 181

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVKE--- 306
            N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK    
Sbjct: 182 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISV 241

Query: 307 ---HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS----------------------- 340
              +  I     D E    +S   R      P    S                       
Sbjct: 242 DELNDTIAANLSDTEFYGAKSHRQRPPTFLTPDGNTSRKEELRGNVLSLECIAEGLPTPI 301

Query: 341 IVWLR--GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W++  G+ PI+      F ++   +L + + +E DSG Y C A+  L  I    ++TV
Sbjct: 302 IYWIKEDGTLPINR----TFYRNFKKTLQIVQVTEADSGNYQCIAKNALGAIHHTISVTV 357

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 358 KAAPYWIIAPQNLVL 372


>gi|1480094|emb|CAA99303.1| neuron-glia cell adhesion molecule (Ng-CAM) [Gallus gallus]
          Length = 1280

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 197/718 (27%), Positives = 305/718 (42%), Gaps = 51/718 (7%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           +ALR   V L CI  G P P   W +   P+    R +  N+ K+L +  V  SD G Y 
Sbjct: 250 IALRGGSVVLECIAEGLPTPWVRWRRLNGPL--PTRAALENFNKTLRLWGVTESDDGEYE 307

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   NG G A+  +  ++V AAPY+   P+       ET   +C+  G P P+I W  NG
Sbjct: 308 CVAENGRGTARG-THSVTVEAAPYWVRRPQSGVFGPGETARLDCEVGGKPRPQIQWSING 366

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            PI   P   RR +    + +  LR +D+    C A N  G +  + +++V+     +  
Sbjct: 367 VPIDALPGAERRWLRGGALVLPELRPNDSAVLQCEARNRHGRLLANAFLHVVELPVRMLT 426

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A +  Y  V+ +TV L CR FGAP P V W+    E  L   R  +   G L+++ V   
Sbjct: 427 ADEQRYEVVENQTVFLHCRTFGAPAPNVEWLTPTLEPALQDDRSFVFTNGSLRLSAVRGG 486

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D G YTC A+N       +  L V+  T I+  P     + G++ TF C A  DP++   
Sbjct: 487 DGGVYTCMAQNAHSNGSLTALLEVRAPTRISAPPRSATAKKGETVTFHCGATFDPAVTPG 546

Query: 341 -IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            + WLRG +P+    +PR+  + + +LTV+     D G   CRA T LD  EA+A L V 
Sbjct: 547 ELRWLRGGQPL--PDDPRYSVAAE-TLTVSNVDYGDEGTIQCRASTPLDSAEAEAQLRV- 602

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE-----GSIRE 454
           V    P     +  +D  +  +SW P       G      ++ +  K+ E     G   E
Sbjct: 603 VGRPGPIRDLQVMEVDEHRVRLSWTP-------GDDHNSPIEKFVVKEEEGIFSAGRFAE 655

Query: 455 LIVNKGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEI-ISFVTPEGVPGTVQS 509
            +   G    T      P  +   RV+A N    G ++ P + I      PE  PG V  
Sbjct: 656 RLTVPGGQPWTPPLPLSPYGRFRFRVVAVNAYGRGEHSAPSAPIETPPAAPERNPGGVHG 715

Query: 510 LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI-SDPTTTSAK 568
            E    G+     + + P+  N   + Y+++++ ++    G      P+  S        
Sbjct: 716 -EGNETGNLVITWEPLPPQAWNAPWVRYRVQWRPLEEPGGGGPSGGFPWAESTVDAPPVV 774

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEGRGSTPNNLVISWT 623
           + GL P + ++I +     AG G E+          +P   P+NV       + + + WT
Sbjct: 775 VGGLPPFSPFQIRVQAVNGAGKGPEATPGVGHSGEDLPLVYPENVGVELLNSSTVRVRWT 834

Query: 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWT 683
               +       + R+   R           VL WR   +   ++    P   ++ Q+  
Sbjct: 835 ----LGGGPKELRGRLRGFR-----------VLYWRLGWVGERSRRQAPPDPPQIPQSPA 879

Query: 684 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
           E         L V  G++    +    P S+   RVL FNG  +GPPSE I+F TPEG
Sbjct: 880 EDPPPFPPVALTVG-GDARGALLGGLRPWSRYQLRVLVFNGRGDGPPSEPIAFETPEG 936



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 103/216 (47%), Gaps = 29/216 (13%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWN-PVSPQSLRGHFRGYKVQTWTEK-DGEGSIREL-- 455
            +PL  P N   ++++++    V W     P+ LRG  RG++V  W     GE S R+   
Sbjct: 811  LPLVYPENVG-VELLNSSTVRVRWTLGGGPKELRGRLRGFRVLYWRLGWVGERSRRQAPP 869

Query: 456  --------------------IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
                                +   G++    +    P S+   RVL FNG  +GPPSE I
Sbjct: 870  DPPQIPQSPAEDPPPFPPVALTVGGDARGALLGGLRPWSRYQLRVLVFNGRGDGPPSEPI 929

Query: 496  SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
            +F TPEGVPG  + L    L  +A  + W +P   NGVL GY ++YQ V+   +G L + 
Sbjct: 930  AFETPEGVPGPPEELRVERLDDTALSVHWKRPRHLNGVLTGYVLRYQQVE-PALG-LPQE 987

Query: 556  LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             PY   P T +A L GL   ++YR+ L   T+ G G
Sbjct: 988  APY--PPGTLNATLRGLNARSRYRLALRASTRVGSG 1021



 Score = 40.8 bits (94), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 76/185 (41%), Gaps = 22/185 (11%)

Query: 236 VVLTCRVFGAPKPEVNWIHNQK----ELTGGRYTILETGDLKI-TDVAFADSGEYTCFAR 290
           +VL C   G P  +  W    +    E  GG   +  +G L I   +A    G + CFA 
Sbjct: 55  IVLKCVATGNPPVQYRWSREDQPFVPEEHGGVSVVPGSGTLVINATLAARLQGRFRCFAT 114

Query: 291 NKLGTAQGSGSLTVKEHTHITDQPED----YEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           N LGTA    +  + E+T     PE      EVE G      C+   + ++   I WL  
Sbjct: 115 NALGTAVSPEANVIAENT--PQWPEKKVTPVEVEEGDPVVLPCDP-PESAVPPKIYWL-N 170

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSG-QYTCRAQTELDFIEAQATLTVQVPLE-- 403
           S+ +    + R     D +L  + +   DS   Y C A     F+  + T+  + PL+  
Sbjct: 171 SDIVHIAQDERVSMGQDGNLYFSNAMVGDSHPDYICHAH----FLGPR-TIIQKEPLDLR 225

Query: 404 -APSN 407
            APSN
Sbjct: 226 VAPSN 230


>gi|392332542|ref|XP_003752615.1| PREDICTED: protein sidekick-1-like [Rattus norvegicus]
          Length = 2114

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 191/639 (29%), Positives = 274/639 (42%), Gaps = 38/639 (5%)

Query: 25  SASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQ 82
           + +Q   AP        + V   + +  L CI    P+ +    W ++GV      R++ 
Sbjct: 188 TGTQEAMAPVIVVAPGNRSVVAGSSETTLECIANARPVEELSVHWKRNGV------RLTS 241

Query: 83  G--NYGKSLIIKHVEFSDQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEF-INA 137
           G  +YG+ L I +   +D G Y CE +      E       LS++  PYFT EPE  I  
Sbjct: 242 GLHSYGRRLTIINPTSADTGMYVCEATLRGSAFEPARAKAFLSIIEPPYFTAEPESRILG 301

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYG 196
             EETV   C+A G+P P + W  +  P+S+   NPR +V P+  + I+ L   D+G + 
Sbjct: 302 EVEETVDIPCRAMGVPLPTLQWYKDAVPLSKLQ-NPRYRVLPSGGLHIQKLSPEDSGIFQ 360

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A N  G +    Y++V   AP  T+ P D    DG T VL C V GAPKP + W    
Sbjct: 361 CFANNEGGEIQTHTYLDVTNIAPAFTQRPVDTTVTDGMTAVLRCEVSGAPKPAITWKKGN 420

Query: 257 KELTGG-----RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT 311
             L  G     R+ +LE+G L+I  V   D+G Y C+A N   +   S  LTV   T I 
Sbjct: 421 HILASGSVRIPRFMLLESGGLRIAPVFIQDAGNYACYATNTEASVNASAMLTVWNRTSIV 480

Query: 312 DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKS 371
             PED  V  G +AT  C A  DP   L  VW + +  I   S  R V   D SL ++++
Sbjct: 481 HPPEDRVVIKGTTATLCCGATHDPRTSLRYVWKKDNAVITPSSSSRIVVEKDGSLVISQT 540

Query: 372 SELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
              D G YTC   +E       A L V + L  P    L  +  A+   V+ + V P   
Sbjct: 541 WSGDIGDYTCEIVSEGGNDSRTARLEV-IELPHPPQNLLASLSSARSHSVTLSWVRPFDG 599

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKG-ESTTTEVDKFVPASKNFARVLAFNGAYNGP 490
                 Y VQ  +E +    +   + N G E     V    PA     RV A N    G 
Sbjct: 600 NSPVLYYIVQV-SENNSPWKVH--LSNVGPEMAGVTVSGLTPARTYQFRVCAVNQVGKGQ 656

Query: 491 PS-EIISFVTPEGVPGT-VQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKG 546
            S E    + PE  P    +++ A    + +  ++W  P +   NGVL GY ++Y+ + G
Sbjct: 657 YSTETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYR-LAG 715

Query: 547 TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVP 601
               P   +   IS P      +  L   T+Y I +A Y  AG G  S+      L  VP
Sbjct: 716 L---PGEHQQRNISSPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVP 772

Query: 602 FKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
              P NV+        +   W   P+   N  +  Y++ 
Sbjct: 773 TAPPQNVQAEAVNSTTVHFLWNPPPQQFINGINQGYKLL 811



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 169/667 (25%), Positives = 261/667 (39%), Gaps = 89/667 (13%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV-GEAK-SYSI 118
           P PQ  W ++G  I PS RI+       L+I     SD G+Y  +  N   GE K S  I
Sbjct: 122 PRPQVTWFREGHKIIPSSRIAI-TLENQLVILATTASDAGAYYVQAVNERNGENKTSPFI 180

Query: 119 DLSV--------LAAPYFTVEP--EFINAAEEETVTFECKASGLP--EPEIHWVHNGKPI 166
            LSV          AP   V P    + A   ET T EC A+  P  E  +HW  NG  +
Sbjct: 181 HLSVARDTGTQEAMAPVIVVAPGNRSVVAGSSET-TLECIANARPVEELSVHWKRNGVRL 239

Query: 167 SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT---NSLGYVYKDVYVNVLAHAPEITE 223
           +    +  R     R+TI N   +DTG Y C AT   ++        +++++   P  T 
Sbjct: 240 TSGLHSYGR-----RLTIINPTSADTGMYVCEATLRGSAFEPARAKAFLSII-EPPYFTA 293

Query: 224 APKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITDVAF 279
            P+     +  +TV + CR  G P P + W  +     +L   RY +L +G L I  ++ 
Sbjct: 294 EPESRILGEVEETVDIPCRAMGVPLPTLQWYKDAVPLSKLQNPRYRVLPSGGLHIQKLSP 353

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKE-HTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            DSG + CFA N+ G  Q    L V       T +P D  V  G +A  RC     P  K
Sbjct: 354 EDSGIFQCFANNEGGEIQTHTYLDVTNIAPAFTQRPVDTTVTDGMTAVLRCEVSGAP--K 411

Query: 339 LSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            +I W +G+  +   S   PRF+      L +      D+G Y C A      + A A L
Sbjct: 412 PAITWKKGNHILASGSVRIPRFMLLESGGLRIAPVFIQDAGNYACYATNTEASVNASAML 471

Query: 397 TV---QVPLEAPSNFTLIQVIDAKKAV-VSWNPVSPQSLRGHFR--------GYKVQTWT 444
           TV      +  P +  +I+   A      + +P +  SLR  ++            +   
Sbjct: 472 TVWNRTSIVHPPEDRVVIKGTTATLCCGATHDPRT--SLRYVWKKDNAVITPSSSSRIVV 529

Query: 445 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGV 503
           EKDG   I +         T E+   V    N +R             E+I     P+ +
Sbjct: 530 EKDGSLVISQTWSGDIGDYTCEI---VSEGGNDSRTARL---------EVIELPHPPQNL 577

Query: 504 PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ------SVKGTKVGPLLERLP 557
             ++ S       S +  L WV+P   N  ++ Y ++         V  + VGP +    
Sbjct: 578 LASLSSAR-----SHSVTLSWVRPFDGNSPVLYYIVQVSENNSPWKVHLSNVGPEM---- 628

Query: 558 YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG---AESKYLFY---VPFKNPDNVEGR 611
                      ++GL P+  Y+  +    + G G    E+  L      P   P N+   
Sbjct: 629 -------AGVTVSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVAS 681

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
           G T  ++++ W   PE EHN     Y + +R         Q ++     +  ++ +   +
Sbjct: 682 GRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEHQQRNISSPEVNYCLVTDLIIW 741

Query: 672 QPYEIKV 678
             YEI+V
Sbjct: 742 TQYEIQV 748



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 12/160 (7%)

Query: 391  EAQATLTVQV------PLEAPSNFTLIQV--IDAKKAVVSWNPVSPQSLRGHFRGYKVQT 442
            E+ A++ V+V      P  AP N   IQV  + A +  V+W+P  P+S  G+ +GYKV  
Sbjct: 1588 ESPASVPVEVFVGEAAPAMAPQN---IQVTPLTASQLEVTWDPPPPESQNGNIQGYKVYY 1644

Query: 443  WTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 502
            W E D      ++ V        ++      +K    + AFN A +GP S+     T + 
Sbjct: 1645 W-EADSRNETEKMKVLFLPEPVVKIKDLTSHTKYLVSISAFNAAGDGPRSDPCQGRTHQA 1703

Query: 503  VPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
             PG    LE   + S+   + W +P   NG+L GY++ Y+
Sbjct: 1704 APGPPSFLEFSEITSTTLNVSWGEPSAANGILQGYRVVYE 1743



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 99/238 (41%), Gaps = 19/238 (7%)

Query: 389 FIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
           F  A    T+Q VP   P N    + +++      WNP   Q + G  +GYK+  W    
Sbjct: 759 FSRAVTEYTLQGVPTAPPQNVQ-AEAVNSTTVHFLWNPPPQQFINGINQGYKLLAWPADA 817

Query: 448 GEGSIRELIVNKGEST----TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGV 503
            E      I      T     T + KF   +  F  VL F    +GPPS      T E  
Sbjct: 818 PETVTAVTIAPDFHGTHHGYITNLKKF---TAYFTSVLCFTTPGDGPPSTPQLVWTHEDR 874

Query: 504 PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
           PG V  L    +  ++  + W +P + NG++ GY+I ++       G    RL +  + T
Sbjct: 875 PGAVGHLSFTEILDTSLKVSWQEPLERNGIITGYQISWEV-----YGRNDSRLTHTLNST 929

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVIS 621
           T   K+ GL   T Y I +A  T AG G  +     +    P ++ G    P+NLVIS
Sbjct: 930 THEYKIQGLSSLTTYTIDVAAMTTAGVGLTTSST--ISSGVPPDLPG---APSNLVIS 982



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 101/275 (36%), Gaps = 29/275 (10%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           APYF  EP       E   +   C A G    E  W+ N   ++             R  
Sbjct: 6   APYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWIRNDSELTA-------YSSEYRYI 58

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR-V 242
           I +L+K D G Y C   N +G + +      +A+     +A + +    G   +L    +
Sbjct: 59  IPSLQKLDAGFYRCVVRNRMGALLQRKSEIQVAYMGNFMDADQRKTVSQGHAALLNLLPI 118

Query: 243 FGAPKPEVNWIH-NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNK--------- 292
              P+P+V W     K +   R  I     L I     +D+G Y   A N+         
Sbjct: 119 TSCPRPQVTWFREGHKIIPSSRIAITLENQLVILATTASDAGAYYVQAVNERNGENKTSP 178

Query: 293 ---LGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSE 348
              L  A+ +G+        I   P +  V AG S  T  C A + P  +LS+ W R   
Sbjct: 179 FIHLSVARDTGTQEAMAPV-IVVAPGNRSVVAGSSETTLECIANARPVEELSVHWKRNG- 236

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            +   S    + S    LT+   +  D+G Y C A
Sbjct: 237 -VRLTSG---LHSYGRRLTIINPTSADTGMYVCEA 267



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 12/208 (5%)

Query: 397  TVQVPLE-APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIR 453
            T+Q P + AP++ T ++        + W P+      G+    GY+V+ W       ++ 
Sbjct: 1071 TLQAPPDVAPTSLT-VRTASETSLRLRWVPLPDSQYNGNPESVGYRVKYWRSDQPSSALA 1129

Query: 454  ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVP-GTVQSLEA 512
            +++ ++ E   T +++    ++   R+ AFN    GP SE++   T E VP  + +++ A
Sbjct: 1130 QVVNDRLERELT-IEELEEWTEYELRMQAFNAIGAGPWSELVRGRTRESVPSASPENVSA 1188

Query: 513  IPLGSSAFYLKWVK-PEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
              + S+   L W   PEQ  NG+++GYK+ Y++ K     P   R   +    T SA LA
Sbjct: 1189 EAVSSTQILLTWASVPEQDQNGLILGYKVLYRA-KDLDPEP---RSHVVRGNHTQSALLA 1244

Query: 571  GLEPSTKYRIHLAGYTKAGDGAESKYLF 598
            GL     Y + +  +T+ G+G  S  L 
Sbjct: 1245 GLRKFVVYELQVLAFTRIGNGVPSSPLI 1272



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 21/200 (10%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  +P N +  + + + + +++W  V  Q   G   GYKV  +  KD +   R  +V  
Sbjct: 1178 VPSASPENVS-AEAVSSTQILLTWASVPEQDQNGLILGYKV-LYRAKDLDPEPRSHVVRG 1235

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNG-PPSEIISFVTPEGVPGTVQSLEAIPLGSS 518
              + +  +           +VLAF    NG P S +I   T +  PG    L    +  +
Sbjct: 1236 NHTQSALLAGLRKFVVYELQVLAFTRIGNGVPSSPLILERTKDDTPGPPVRLVFPEVRLT 1295

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGT-------KVGPLLERLPYISDPTTTSAKLAG 571
            A  + W  PE+PNGV++GY+I Y+   G+       +VG  + +         T+ +LA 
Sbjct: 1296 AVRIVWQPPEEPNGVILGYQIAYRLASGSPHTFTTVEVGATVRQF--------TATELA- 1346

Query: 572  LEPSTKYRIHLAGYTKAGDG 591
              P + Y   L+  T+ G G
Sbjct: 1347 --PESAYIFRLSAKTRQGWG 1364



 Score = 47.4 bits (111), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 33/234 (14%)

Query: 388  DF-IEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE 445
            DF  E +A  T+Q VP E P + +      +   ++ W P   +SL G  +GY++  + E
Sbjct: 1466 DFSAETEAVTTLQDVPGEPPGSVSATPHTTSS-VLIQWQPPRDESLNGLLQGYRIY-YRE 1523

Query: 446  KDGE-------GSIRELIVNKGESTTTEVDKFVPAS-----------KNFARVLAFNGAY 487
             + E        +++     + E T     K V +S           K + R      AY
Sbjct: 1524 LESETGLSPEPKTLKSPSALRAELTAQSSFKTVNSSSTLTTYELTHLKKYRRYEVIMTAY 1583

Query: 488  N----GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIK 540
            N     P S  +     E  P    Q+++  PL +S   + W    PE  NG + GYK+ 
Sbjct: 1584 NIIGESPASVPVEVFVGEAAPAMAPQNIQVTPLTASQLEVTWDPPPPESQNGNIQGYKVY 1643

Query: 541  YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y           ++ L ++ +P     K+  L   TKY + ++ +  AGDG  S
Sbjct: 1644 YWEADSRNETEKMKVL-FLPEPV---VKIKDLTSHTKYLVSISAFNAAGDGPRS 1693



 Score = 46.6 bits (109), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 64/170 (37%), Gaps = 16/170 (9%)

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG----GRYTILETGDLKITDV 277
           TE    +  ++G  +VLTC   G+   E  WI N  ELT      RY I     L     
Sbjct: 11  TEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWIRNDSELTAYSSEYRYIIPSLQKL----- 65

Query: 278 AFADSGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              D+G Y C  RN++G   Q    + V    +  D  +   V  G +A      ++   
Sbjct: 66  ---DAGFYRCVVRNRMGALLQRKSEIQVAYMGNFMDADQRKTVSQGHAALLNLLPITS-C 121

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
            +  + W R    I   S       N   +  T +S  D+G Y  +A  E
Sbjct: 122 PRPQVTWFREGHKIIPSSRIAITLENQLVILATTAS--DAGAYYVQAVNE 169


>gi|426355367|ref|XP_004045095.1| PREDICTED: protein sidekick-1, partial [Gorilla gorilla gorilla]
          Length = 2273

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 189/625 (30%), Positives = 275/625 (44%), Gaps = 44/625 (7%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
           + V   + +  L CI    P+      W ++GV      RI+ G  ++G+ L I +   +
Sbjct: 362 RSVVAGSSETTLECIASARPVEDLSVTWKRNGV------RITSGLHSFGRRLTISNPTSA 415

Query: 98  DQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPE 154
           D G Y CE +      E    +  L ++  PYFT EPE  I+A  EETV   C+A G+P 
Sbjct: 416 DTGPYVCEAALRGSTFEPARATAFLFIIEPPYFTAEPESRISAEVEETVDIGCQAMGVPL 475

Query: 155 PEIHWVHNGKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P + W  +   IS+   NPR KV     + I+ LR  D+G + C A+N  G +    Y++
Sbjct: 476 PTLQWYKDAISISRLQ-NPRYKVLTSGGLRIQKLRPEDSGIFQCFASNEGGEIQTHTYLD 534

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V   AP  T+ P D    DG T +L C V GAPKP + W      L  G     R+ +LE
Sbjct: 535 VTNIAPVFTQRPVDTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLE 594

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L+I  V   D+G YTC+A N  G+   S +LTV   T I   PED+ V  G +AT  
Sbjct: 595 SGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNRTSIVHPPEDHVVIKGTTATLH 654

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A  DP + L  VW + +  +   S  R V   D SL ++++   D G Y+C   +E  
Sbjct: 655 CGATHDPRVSLRYVWKKDNVALTPSSTSRIVVEKDGSLLISQTWSGDIGDYSCEIVSEGG 714

Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV-SWNPVSPQSLRGHFRGYKVQTWTEKD 447
                A L V     +P N           AVV SW  V P         Y V+  +E +
Sbjct: 715 NDSRMARLEVIELPHSPQNLLASPNSSHSHAVVLSW--VRPFDGNSPILYYIVEL-SENN 771

Query: 448 GEGSIRELIVNKG-ESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEG 502
               +   + N G E T   V    PA     RV A N    G Y+   S ++    P  
Sbjct: 772 SPWKVH--LSNVGPEMTGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPS 829

Query: 503 VPGTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560
            P   +++ A    + +  ++W  P +   NGVL GY ++Y+ + G   G   +R   I+
Sbjct: 830 APP--KNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYR-LAGLP-GEYQQR--NIT 883

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEGRGSTP 615
            P      +  L   T+Y I +A Y  AG G  S+      L  VP   P NV+      
Sbjct: 884 SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNS 943

Query: 616 NNLVISWTAMPEIEHNAPHFKYRIF 640
             +   W   P+   N  +  Y++ 
Sbjct: 944 TTIQFLWNPPPQQFINGINQGYKLL 968



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 176/679 (25%), Positives = 265/679 (39%), Gaps = 113/679 (16%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN-GVGEAK-SYSI 118
           P PQ  W ++G  I PS+RI+       L+I      D G+Y  +  N   GE K S  I
Sbjct: 279 PRPQVTWFREGHKIIPSNRIAI-TLENQLVILATTTGDTGAYYVQAVNEKNGENKTSPFI 337

Query: 119 DLSV--------LAAPYFTVEP--EFINAAEEETVTFECKASGLP--EPEIHWVHNGKPI 166
            LS+          AP   V P    + A   ET T EC AS  P  +  + W  NG  I
Sbjct: 338 HLSIARDVGTPETMAPTIVVPPGNRSVVAGSSET-TLECIASARPVEDLSVTWKRNGVRI 396

Query: 167 SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV---LAHAPEITE 223
           +    +  R     R+TI N   +DTG Y C A    G  ++         +   P  T 
Sbjct: 397 TSGLHSFGR-----RLTISNPTSADTGPYVCEAALR-GSTFEPARATAFLFIIEPPYFTA 450

Query: 224 APKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITDVAF 279
            P+   + +  +TV + C+  G P P + W  +      L   RY +L +G L+I  +  
Sbjct: 451 EPESRISAEVEETVDIGCQAMGVPLPTLQWYKDAISISRLQNPRYKVLTSGGLRIQKLRP 510

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHI-TDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            DSG + CFA N+ G  Q    L V     + T +P D  V  G +A  RC     P  K
Sbjct: 511 EDSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRPVDTTVTDGMTAILRCEVSGAP--K 568

Query: 339 LSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            +I W R +  +   S   PRF+      L +      D+G YTC A      + A ATL
Sbjct: 569 PAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATL 628

Query: 397 TV---QVPLEAPSNFTLIQVIDA------------------KKAVVSWNPVSPQSLRGHF 435
           TV      +  P +  +I+   A                  KK  V+  P S   +    
Sbjct: 629 TVWNRTSIVHPPEDHVVIKGTTATLHCGATHDPRVSLRYVWKKDNVALTPSSTSRIVVEK 688

Query: 436 RGYKV--QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
            G  +  QTW+   G+ S    IV++G + +             AR+            E
Sbjct: 689 DGSLLISQTWSGDIGDYSCE--IVSEGGNDS-----------RMARL------------E 723

Query: 494 IISFVTPEGVPGTVQSLEAIPLG--SSAFYLKWVKPEQPNGVLMGYKIKYQ------SVK 545
           +I        P + Q+L A P    S A  L WV+P   N  ++ Y ++         V 
Sbjct: 724 VIEL------PHSPQNLLASPNSSHSHAVVLSWVRPFDGNSPILYYIVELSENNSPWKVH 777

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG---AESKYLFY--- 599
            + VGP +           T   ++GL P+  Y+  +    + G G   AE+  L     
Sbjct: 778 LSNVGPEM-----------TGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEE 826

Query: 600 VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
            P   P N+   G T  ++++ W   PE EHN     Y + +R       + Q ++    
Sbjct: 827 PPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNITSPE 886

Query: 660 QSELVLANQPTFQPYEIKV 678
            +  ++ +   +  YEI+V
Sbjct: 887 VNYCLVTDLIIWTQYEIQV 905



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 100/240 (41%), Gaps = 23/240 (9%)

Query: 389  FIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
            F  A    T+Q VP   P N    + +++      WNP   Q + G  +GYK+  W    
Sbjct: 916  FSRAVTEYTLQGVPTAPPQNVQ-TEAVNSTTIQFLWNPPPQQFINGINQGYKLLAWPADA 974

Query: 448  GEGSIRELI------VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
             E      I      V+ G    T + KF   +  F  VL F    +GPPS      T E
Sbjct: 975  PEAVTVVTIAPDFHGVHHGH--ITNLKKF---TAYFTSVLCFTTPGDGPPSTPQLVWTQE 1029

Query: 502  GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
              PG V  L    +  ++  + W +P + NG++ GY+I ++       G    RL +  +
Sbjct: 1030 DKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQISWEV-----YGRNDSRLTHTLN 1084

Query: 562  PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVIS 621
             TT   K+ GL   T Y I +A  T  G G  +     +    P ++ G    P+NLVIS
Sbjct: 1085 STTHEYKIQGLSSLTTYTIDVAAVTAVGAGLVTSST--ISSGVPPDLPG---APSNLVIS 1139



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 2/142 (1%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP N   +  + A +  ++W+P  P+S  G+ +GYK+  W E D +    ++ V   
Sbjct: 1761 PAMAPQNVQ-VTPLTASQLEITWDPPPPESQNGNIQGYKIYYW-EADSQNETEKMKVLFL 1818

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
                  +      +K    + AFN A +GP S+     T +  PG    L    + S+  
Sbjct: 1819 PEPVVRLKNLTSHTKYLVSISAFNAAGDGPRSDPQQGRTHQAAPGAPSFLAFSEITSTTL 1878

Query: 521  YLKWVKPEQPNGVLMGYKIKYQ 542
             + W +P   NG+L GY++ Y+
Sbjct: 1879 NVSWGEPAAANGILQGYRVVYE 1900



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 100/275 (36%), Gaps = 29/275 (10%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           APYF  EP       E   +   C A G    E  W+H+   ++             +  
Sbjct: 163 APYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMHDDSELTTYSSE-------YKYI 215

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR-V 242
           I +L+K D G Y C   N +G + +      +A+     +  + +    G+  +L    +
Sbjct: 216 IPSLQKQDAGFYRCVVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVSQGRAAILNLLPI 275

Query: 243 FGAPKPEVNWIH-NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNK--------- 292
              P+P+V W     K +   R  I     L I      D+G Y   A N+         
Sbjct: 276 TSYPRPQVTWFREGHKIIPSNRIAITLENQLVILATTTGDTGAYYVQAVNEKNGENKTSP 335

Query: 293 ---LGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSE 348
              L  A+  G+      T I   P +  V AG S  T  C A + P   LS+ W R   
Sbjct: 336 FIHLSIARDVGTPETMAPT-IVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGV 394

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            I        + S    LT++  +  D+G Y C A
Sbjct: 395 RIT-----SGLHSFGRRLTISNPTSADTGPYVCEA 424



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 87/381 (22%), Positives = 143/381 (37%), Gaps = 44/381 (11%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           ++ L   ++ L C+  G+   +  W  D         ++  +     II  ++  D G Y
Sbjct: 174 QIHLEGNRLVLTCLAEGSWPLEFKWMHD------DSELTTYSSEYKYIIPSLQKQDAGFY 227

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGL--------PE 154
            C V N +G       ++ V    Y      F++  + +TV+ + +A+ L        P 
Sbjct: 228 RCVVRNRMGALLQRKSEVQVA---YMG---SFMDTDQRKTVS-QGRAAILNLLPITSYPR 280

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLG-------YVY 207
           P++ W   G  I   P N       N++ I      DTG Y   A N          +++
Sbjct: 281 PQVTWFREGHKI--IPSNRIAITLENQLVILATTTGDTGAYYVQAVNEKNGENKTSPFIH 338

Query: 208 KDVYVNV---LAHAPEITEAPKDEYTVDGKT-VVLTCRVFGAPKPE--VNWIHNQKELTG 261
             +  +V      AP I   P +   V G +   L C     P  +  V W  N   +T 
Sbjct: 339 LSIARDVGTPETMAPTIVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGVRITS 398

Query: 262 GRYTILETGDLKITDVAFADSGEYTCFARNKLGT---AQGSGSLTVKEHTHITDQPED-Y 317
           G ++      L I++   AD+G Y C A  +  T   A+ +  L + E  + T +PE   
Sbjct: 399 GLHSFGR--RLTISNPTSADTGPYVCEAALRGSTFEPARATAFLFIIEPPYFTAEPESRI 456

Query: 318 EVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSG 377
             E  ++    C A+  P   L   W + +  I     PR+       L + K    DSG
Sbjct: 457 SAEVEETVDIGCQAMGVPLPTLQ--WYKDAISISRLQNPRYKVLTSGGLRIQKLRPEDSG 514

Query: 378 QYTCRAQTELDFIEAQATLTV 398
            + C A  E   I+    L V
Sbjct: 515 IFQCFASNEGGEIQTHTYLDV 535



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 10/207 (4%)

Query: 397  TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIRE 454
            T+Q P +       ++        + W P+      G+    GY+++ W       ++ +
Sbjct: 1228 TLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRSDLQSSAVAQ 1287

Query: 455  LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEAI 513
            ++ ++ E   T +++     +   ++ AFN    GP SE++   T E VP    +++ A 
Sbjct: 1288 VVSDRLEREFT-IEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRESVPSAAPENVSAE 1346

Query: 514  PLGSSAFYLKWVK-PEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAG 571
             + S+   L W   PEQ  NG+++GYKI +++ K     P   R   +    T SA LAG
Sbjct: 1347 AVSSTQILLTWASVPEQDQNGLILGYKILFRA-KDLDPEP---RSHIVRGNHTQSALLAG 1402

Query: 572  LEPSTKYRIHLAGYTKAGDGAESKYLF 598
            L     Y + +  +T+ G+G  S  L 
Sbjct: 1403 LRKFVLYELQVLAFTRIGNGVPSTPLI 1429



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 30/229 (13%)

Query: 391  EAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV--QTWTEKD 447
            E +A  T+Q VP E P + +      +   ++ W P   +SL G  +GY++  +    + 
Sbjct: 1627 ETEAVTTLQDVPGEPPGSVSATPHTTSS-VLIQWQPPRDESLNGLLQGYRIYYRELEYEA 1685

Query: 448  GEGS----IRELIVNKGESTTTEVDKFVPAS-----------KNFARVLAFNGAYN---- 488
            G G+    ++  I  + E T     K V +S           K + R      AYN    
Sbjct: 1686 GSGTEAKTLKSPIALRAELTAQSTFKTVNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGE 1745

Query: 489  GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
             P S  +     E  P    Q+++  PL +S   + W    PE  NG + GYKI Y    
Sbjct: 1746 SPASAPVEVFVGEAAPAMAPQNVQVTPLTASQLEITWDPPPPESQNGNIQGYKIYYWEAD 1805

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
                   ++ L ++ +P     +L  L   TKY + ++ +  AGDG  S
Sbjct: 1806 SQNETEKMKVL-FLPEPV---VRLKNLTSHTKYLVSISAFNAAGDGPRS 1850



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 3/144 (2%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V  Q   G   GYK+  +  KD +   R  IV  
Sbjct: 1335 VPSAAPENVS-AEAVSSTQILLTWASVPEQDQNGLILGYKI-LFRAKDLDPEPRSHIVRG 1392

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-IISFVTPEGVPGTVQSLEAIPLGSS 518
              + +  +           +VLAF    NG PS  +I   T +  PG    L    +  +
Sbjct: 1393 NHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLT 1452

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQ 542
            +  + W  PE+PNG+++GY+I Y+
Sbjct: 1453 SVRIVWQPPEEPNGIILGYQIAYR 1476



 Score = 44.3 bits (103), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 27/208 (12%)

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFVTPEGVPGTVQ-SLEAIPLGSS 518
            E+T   VD+  P +    R+ A N   +    SE  +  T + VPG    S+ A P  +S
Sbjct: 1594 EATACVVDRLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTS 1653

Query: 519  AFYLKWVKP--EQPNGVLMGYKIKYQSVK-----GTKV----GPLLERLPYI-------- 559
            +  ++W  P  E  NG+L GY+I Y+ ++     GT+      P+  R            
Sbjct: 1654 SVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKSPIALRAELTAQSTFKTV 1713

Query: 560  -SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYV----PFKNPDNVEGRGS 613
             S  T+T  +L  L+   +Y + +  Y   G+  A +    +V    P   P NV+    
Sbjct: 1714 NSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTPL 1773

Query: 614  TPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            T + L I+W   P    N     Y+I++
Sbjct: 1774 TASQLEITWDPPPPESQNGNIQGYKIYY 1801



 Score = 42.7 bits (99), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 66/166 (39%), Gaps = 8/166 (4%)

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
           TE    +  ++G  +VLTC   G+   E  W+H+  ELT    T        I  +   D
Sbjct: 168 TEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMHDDSELT----TYSSEYKYIIPSLQKQD 223

Query: 282 SGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           +G Y C  RN++G   Q    + V       D  +   V  G++A      ++    +  
Sbjct: 224 AGFYRCVVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVSQGRAAILNLLPITS-YPRPQ 282

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + W R    I   +  R   + +  L +  ++  D+G Y  +A  E
Sbjct: 283 VTWFREGHKIIPSN--RIAITLENQLVILATTTGDTGAYYVQAVNE 326


>gi|395539191|ref|XP_003771556.1| PREDICTED: LOW QUALITY PROTEIN: neuronal cell adhesion molecule
           [Sarcophilus harrisii]
          Length = 1306

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 160/523 (30%), Positives = 242/523 (46%), Gaps = 36/523 (6%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           LR   + L CI  G P P   W+K DG +PIN   R S  N+ K+L I  V  +D G Y 
Sbjct: 285 LRENVLSLECIAEGLPTPSITWTKEDGELPIN---RTSYTNFRKTLNINLVSEADSGKYK 341

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G  + ++I ++V AAPY+   P+ +  +  E  T  C+A+G P+P+I W+ NG
Sbjct: 342 CTARNPLGFVE-HTISVTVKAAPYWITAPKNLVLSPGEDGTLICRANGNPKPKISWLTNG 400

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-T 222
            PI  AP +P RK+  + I   ++++S +  Y CNA+N  GY+  + +VNVLA  P I T
Sbjct: 401 VPIEMAPDDPSRKIDGDTILFSDVQESSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT 460

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           +A      +  +  +L C  FG+P P   W    K   L    Y   + G L+I      
Sbjct: 461 DANLHYQVITDRPAMLDCAFFGSPIPTFKWFKGTKGSVLQENTYIFHDNGTLEIPVAQKD 520

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            +G YTC  RNKLG A+    L +K+ T I   PE   V+ G   +F C    DP+L  +
Sbjct: 521 SAGTYTCVVRNKLGMAKNDVHLEIKDPTRIIKHPEYKVVQRGGKVSFECKVKHDPTLIAT 580

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           + WL+ +   +  ++ RF   ND+ L +   S+ D   YTC A T LD + A A L V  
Sbjct: 581 LTWLKDNG--ELPNDGRFSIDNDH-LVIMNISDEDDATYTCVANTSLDIVSASAVLRVVA 637

Query: 401 PLEAPS----------NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG 450
           P   P+          +  L  +++ +   +SW P    +       + ++        G
Sbjct: 638 PSPTPAPVYDRPNPPFDLELTSLLE-RSVQLSWIPGDENN--SPITDFIIEYEDSLHEPG 694

Query: 451 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF-----VTPEGVPG 505
                    G  TT E+ K  P  K   RV+A N      PSE+  +       PE  P 
Sbjct: 695 IWHHHSDVPGTQTTAEL-KLSPYVKYSFRVIAVNSIGRSLPSEVSEYYMTKAAEPEENPT 753

Query: 506 TVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKG 546
            V+ + + P       + W  +K    NG  + YK+ ++   G
Sbjct: 754 AVEGIGSEP---DNLVITWQPLKGFDSNGPGLQYKVSWRQKDG 793



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 141/561 (25%), Positives = 230/561 (40%), Gaps = 46/561 (8%)

Query: 140 EETVTFECKASGLPEPEIHWV-HNGK-PISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           E  ++ EC A GLP P I W   +G+ PI++      RK     + I  + ++D+G Y C
Sbjct: 287 ENVLSLECIAEGLPTPSITWTKEDGELPINRTSYTNFRKT----LNINLVSEADSGKYKC 342

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN-- 255
            A N LG+V   + V V A AP    APK+     G+   L CR  G PKP+++W+ N  
Sbjct: 343 TARNPLGFVEHTISVTVKA-APYWITAPKNLVLSPGEDGTLICRANGNPKPKISWLTNGV 401

Query: 256 QKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITD 312
             E+     +    GD +  +DV  + S  Y C A N+ G    +  + V       +TD
Sbjct: 402 PIEMAPDDPSRKIDGDTILFSDVQESSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTD 461

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
               Y+V   + A   C     P       W +G++    + E  ++  ++ +L +  + 
Sbjct: 462 ANLHYQVITDRPAMLDCAFFGSPIPTFK--WFKGTKGSVLQ-ENTYIFHDNGTLEIPVAQ 518

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           +  +G YTC  + +L   +    L ++ P     +     V    K           +L 
Sbjct: 519 KDSAGTYTCVVRNKLGMAKNDVHLEIKDPTRIIKHPEYKVVQRGGKVSFECKVKHDPTLI 578

Query: 433 GHFRGYKVQTWTEKDGEGSI-RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                 K       DG  SI  + +V    S   +      A+ +   V A         
Sbjct: 579 ATLTWLKDNGELPNDGRFSIDNDHLVIMNISDEDDATYTCVANTSLDIVSA--------- 629

Query: 492 SEIISFVTPEGVPGTVQS-------LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ-S 543
           S ++  V P   P  V         LE   L   +  L W+  ++ N  +  + I+Y+ S
Sbjct: 630 SAVLRVVAPSPTPAPVYDRPNPPFDLELTSLLERSVQLSWIPGDENNSPITDFIIEYEDS 689

Query: 544 VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV--- 600
           +    +      +P     T T+A+L  L P  KY   +      G    S+   Y    
Sbjct: 690 LHEPGIWHHHSDVP----GTQTTAELK-LSPYVKYSFRVIAVNSIGRSLPSEVSEYYMTK 744

Query: 601 ---PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLD 657
              P +NP  VEG GS P+NLVI+W  +   + N P  +Y++ WR+ +  + W    V+ 
Sbjct: 745 AAEPEENPTAVEGIGSEPDNLVITWQPLKGFDSNGPGLQYKVSWRQKDGDDEWTS--VVV 802

Query: 658 WRQSELVLANQPTFQPYEIKV 678
              S+ +++  PTF PY +KV
Sbjct: 803 ANVSKYIVSGTPTFVPYLVKV 823



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW-----TEKDGEGSIRE 454
            +P+ APSN   + V+++  A V W PV P+S+RGH +GY++  W     ++++     ++
Sbjct: 846  LPMVAPSNVH-VNVVNSTLAEVHWEPVPPKSIRGHLKGYRIYYWKVKNSSKRNKRHVEKK 904

Query: 455  LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
            ++   G  T   +    P S     V   NG   GP S    F TPEGVP     L+ + 
Sbjct: 905  ILTFNGNKTHGMLPGLEPFSHYMLNVRVVNGKGEGPASVDRVFNTPEGVPSAPLFLKIVN 964

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +K+Q +  T ++GPL++ ++P       TS  L  L
Sbjct: 965  PTLDSLTLEWDPPSHPNGILTAYTLKFQPINSTHELGPLVDIKIP----ANMTSLILRNL 1020

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              +T+Y+ +    T AG G++
Sbjct: 1021 SYNTRYKFYFYAQTSAGSGSQ 1041



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 148/624 (23%), Positives = 233/624 (37%), Gaps = 57/624 (9%)

Query: 8   EYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALR-NKKVELFCIFGGTPLPQTI 66
           +YK   R  L  +   IS +  + AP   ++T  K + L   +   L C   G P P+  
Sbjct: 339 KYKCTARNPLGFVEHTISVTV-KAAP--YWITAPKNLVLSPGEDGTLICRANGNPKPKIS 395

Query: 67  WSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLS 121
           W  +GVPI     +PS +I     G +++   V+ S    Y C  SN  G   + +  ++
Sbjct: 396 WLTNGVPIEMAPDDPSRKID----GDTILFSDVQESSSAVYQCNASNEYGYLLANAF-VN 450

Query: 122 VLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGP 179
           VLA P    T          +     +C   G P P   W   G   S    N       
Sbjct: 451 VLAEPPRILTDANLHYQVITDRPAMLDCAFFGSPIPTFKWF-KGTKGSVLQENTYIFHDN 509

Query: 180 NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLT 239
             + I   +K   G Y C   N LG    DV++ +      I + P+ +    G  V   
Sbjct: 510 GTLEIPVAQKDSAGTYTCVVRNKLGMAKNDVHLEI-KDPTRIIKHPEYKVVQRGGKVSFE 568

Query: 240 CRVFGAPK--PEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTA 296
           C+V   P     + W+ +  EL   GR++I +   L I +++  D   YTC A   L   
Sbjct: 569 CKVKHDPTLIATLTWLKDNGELPNDGRFSI-DNDHLVIMNISDEDDATYTCVANTSLDIV 627

Query: 297 QGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE---PI--- 350
             S  L V     +   P    V    +  F     S     + + W+ G E   PI   
Sbjct: 628 SASAVLRV-----VAPSPTPAPVYDRPNPPFDLELTSLLERSVQLSWIPGDENNSPITDF 682

Query: 351 -----DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV----- 400
                D   EP     +        ++EL    Y   +   +       +L  +V     
Sbjct: 683 IIEYEDSLHEPGIWHHHSDVPGTQTTAELKLSPYVKYSFRVIAVNSIGRSLPSEVSEYYM 742

Query: 401 --PLEAPSNFTLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
               E   N T ++ I ++    V++W P+      G    YKV +W +KDG+     ++
Sbjct: 743 TKAAEPEENPTAVEGIGSEPDNLVITWQPLKGFDSNGPGLQYKV-SWRQKDGDDEWTSVV 801

Query: 457 V-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQS-LEAIP 514
           V N  +   +    FVP      +V A N     P   II   + E +P    S +    
Sbjct: 802 VANVSKYIVSGTPTFVPY---LVKVQALNDVGFAPEPVIIIGHSGEDLPMVAPSNVHVNV 858

Query: 515 LGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERLPYISDPTTTSAKLA 570
           + S+   + W  V P+   G L GY+I Y  VK +  +    +E+     +   T   L 
Sbjct: 859 VNSTLAEVHWEPVPPKSIRGHLKGYRIYYWKVKNSSKRNKRHVEKKILTFNGNKTHGMLP 918

Query: 571 GLEPSTKYRIHLAGYTKAGDGAES 594
           GLEP + Y +++      G+G  S
Sbjct: 919 GLEPFSHYMLNVRVVNGKGEGPAS 942



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 163/412 (39%), Gaps = 55/412 (13%)

Query: 30  RHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDG----VPINPSDRI--SQG 83
           R +PK  Y+   +E       +E+ C   G P P   W+++G    +  +P  ++  + G
Sbjct: 52  RQSPKD-YIIDPRE------NIEIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVKMLPNSG 104

Query: 84  NYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEE 141
               S+ I+    + +G Y C   N  G A S +I +    +P +T E   +      + 
Sbjct: 105 TLVISITIEGKAETYEGVYQCTARNERGAAISNNIIIRPSRSPLWTKEKLEQITILKGQS 164

Query: 142 TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTG-NYGCNA 199
            V       GLP P I W+ N     + P + R   G N  +   N+   DT  +Y C A
Sbjct: 165 LVLPCRPPLGLPPPIIFWMDNS--FQRLPQSERVSQGLNGDLYFSNVLPEDTREDYVCYA 222

Query: 200 T-NSLGYVYKDVYVNVLAH--------------------APEITEAPKDEYTVDGKT--- 235
             N    + +   ++V  H                    A    E P    + +G+T   
Sbjct: 223 RFNHTQTIQQKQPISVKVHSMDELNDTITANLSDSEFYGAKSYIERPPKLLSPEGRTSHK 282

Query: 236 -------VVLTCRVFGAPKPEVNWIHNQKELTGGR--YTILETGDLKITDVAFADSGEYT 286
                  + L C   G P P + W     EL   R  YT      L I  V+ ADSG+Y 
Sbjct: 283 EELRENVLSLECIAEGLPTPSITWTKEDGELPINRTSYTNFRK-TLNINLVSEADSGKYK 341

Query: 287 CFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           C ARN LG  + + S+TVK   +    P++  +  G+  T  C A  +P  K+S  WL  
Sbjct: 342 CTARNPLGFVEHTISVTVKAAPYWITAPKNLVLSPGEDGTLICRANGNPKPKIS--WLTN 399

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             PI+   +    + +  ++  +   E  S  Y C A  E  ++ A A + V
Sbjct: 400 GVPIEMAPDDPSRKIDGDTILFSDVQESSSAVYQCNASNEYGYLLANAFVNV 451



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 131/316 (41%), Gaps = 51/316 (16%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN------RITIENLRKSDTGN 194
           E +  +C+A G P P   W  NG        +P  K+ PN       ITIE   ++  G 
Sbjct: 64  ENIEIQCEAKGKPPPSFSWTRNGTHF-DIDKDPLVKMLPNSGTLVISITIEGKAETYEGV 122

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPE-VNW 252
           Y C A N  G    +  +   + +P  T+   ++ T+  G+++VL CR      P  + W
Sbjct: 123 YQCTARNERGAAISNNIIIRPSRSPLWTKEKLEQITILKGQSLVLPCRPPLGLPPPIIFW 182

Query: 253 IHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVKEHT 308
           + N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK H+
Sbjct: 183 MDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYVCYARFNHTQTIQQKQPISVKVHS 242

Query: 309 H------ITDQPEDYEVEAGQSATFRCNAVSDP---------------SLKL-------- 339
                  IT    D E    +S   R   +  P               SL+         
Sbjct: 243 MDELNDTITANLSDSEFYGAKSYIERPPKLLSPEGRTSHKEELRENVLSLECIAEGLPTP 302

Query: 340 SIVWLR--GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           SI W +  G  PI+  S   F +    +L +   SE DSG+Y C A+  L F+E   ++T
Sbjct: 303 SITWTKEDGELPINRTSYTNFRK----TLNINLVSEADSGKYKCTARNPLGFVEHTISVT 358

Query: 398 VQVP---LEAPSNFTL 410
           V+     + AP N  L
Sbjct: 359 VKAAPYWITAPKNLVL 374


>gi|348514834|ref|XP_003444945.1| PREDICTED: neural cell adhesion molecule L1-like protein
           [Oreochromis niloticus]
          Length = 1331

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 199/719 (27%), Positives = 307/719 (42%), Gaps = 72/719 (10%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGS 101
           ++V L+ + ++L CI  G P P   W K G  ++P  R+   NY K L +  VE SD+G 
Sbjct: 323 EKVLLKGEDLQLECIPEGFPTPSVKWIKMGEVMSP--RVKFNNYNKLLSLSAVEESDEGK 380

Query: 102 YTCEVSNGVGEAKSYSIDLSVLAAP-YFTVEPEFINAAEEETVTFECKASGLPEPEIHWV 160
           Y C   N VG+A  Y  D+ V   P + T  P+         V  +C  SG P+P I W 
Sbjct: 381 YMCTAENSVGKAVHY-FDVIVEEPPKWLTEPPQSQLTVIGSDVHIKCSVSGKPQPAITWR 439

Query: 161 HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
            NG      P N R +V  + +T+ N +  D+G Y C A+N  G +  +V + ++  AP 
Sbjct: 440 RNGVMFRDDPDN-RMQVFDDTVTLLNAKAEDSGVYQCEASNRHGTILANVNIMIMNMAPL 498

Query: 221 ITEAPKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD-LKITDVA 278
           I      EY  V GK + + C VF +P   ++W  ++  + G R+   E+G  L+I +  
Sbjct: 499 ILTENNQEYAVVVGKEITMNCSVFSSPPSSISWTKDENAIEGERFLAFESGQSLRIINAE 558

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
             DSG+YTC A N  G++  +  L VK+ T I   P++ +V++G+ A   C    D SL+
Sbjct: 559 KGDSGKYTCVASNMEGSSTVTAVLDVKDATKIVSPPQNTQVDSGKLAKLMCETEYDASLQ 618

Query: 339 --LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL-DSGQYTCRAQTELDFIEAQAT 395
               +VW + ++ I   S+     S   ++    +  L D G+YTC A+T LD   A A 
Sbjct: 619 DTFELVWRKDNKEIPLSSDKHSRYSVKGAMLEIMNVNLSDQGRYTCTARTSLDEDSATAV 678

Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQ--SLRGHFRGYKVQTWTEKDGEGSIR 453
           LTV+   +AP    L ++   +  V+SW P S    ++      Y+   W      G  +
Sbjct: 679 LTVRDVPDAPIKLELSELDSPRNVVLSWIPGSDHNSTVTEFVVEYEENRWE----PGRWK 734

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLE 511
           EL    G   T E+  +   +  F RV A N    GPPSE      TP   P    ++++
Sbjct: 735 ELQRVTGNQATAELKLYGNLNYQF-RVYAVNAIGPGPPSEPTERHKTPPAAPDRNPENIK 793

Query: 512 AIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQS--VKGTKVGPLLERLPYISDPTTTSA 567
                     + W  + P + NG    YK+KY+   V+      ++ R  ++ + T T  
Sbjct: 794 IQGHHPHQMEISWEPLSPLERNGPGFEYKVKYRQLGVEDNFTEHMVNRSVFLVNNTPTFV 853

Query: 568 KLAGLEPSTKYRIHLAGYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISW 622
                     Y I +      G G E K +       VP   P ++         L +SW
Sbjct: 854 ---------PYEIKILSRNSYGWGPEPKPVTGYSGEDVPTAAPRDIAVEVINTTVLRVSW 904

Query: 623 TAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTW 682
           T +P          Y + W R  +    N D +LD       L++  +F           
Sbjct: 905 TPVPPATVRGRLGGYNVHWVRRRS--LLNPDKILD-------LSHSMSFS---------- 945

Query: 683 TEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                           G  +   V    P S+    V  FN   NGP S+ ++F TPEG
Sbjct: 946 ----------------GNRSHVIVPGLEPFSEYKLTVYVFNKKGNGPKSDPVTFNTPEG 988



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 8/198 (4%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK------DGEGSIR 453
            VP  AP +   ++VI+     VSW PV P ++RG   GY V  W  +      D    + 
Sbjct: 882  VPTAAPRDIA-VEVINTTVLRVSWTPVPPATVRGRLGGYNVH-WVRRRSLLNPDKILDLS 939

Query: 454  ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAI 513
              +   G  +   V    P S+    V  FN   NGP S+ ++F TPEGVP  V  L + 
Sbjct: 940  HSMSFSGNRSHVIVPGLEPFSEYKLTVYVFNKKGNGPKSDPVTFNTPEGVPEQVTVLTSS 999

Query: 514  PLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLE 573
             +   +  L+W +P + NG+L GY ++Y  +  T +  +  +   I+   T    L GL 
Sbjct: 1000 IIQKDSVRLEWAQPSKSNGILSGYLLQYHLINETALEVIDSKEINITGADTNHWTLQGLN 1059

Query: 574  PSTKYRIHLAGYTKAGDG 591
              + YR  L   T+AG G
Sbjct: 1060 GDSLYRFDLRACTRAGCG 1077



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 136/604 (22%), Positives = 232/604 (38%), Gaps = 82/604 (13%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPI--NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           V + C   G P P   W ++GV    +P +R+    +  ++ + + +  D G Y CE SN
Sbjct: 422 VHIKCSVSGKPQPAITWRRNGVMFRDDPDNRMQV--FDDTVTLLNAKAEDSGVYQCEASN 479

Query: 109 GVGEAKSYSIDLSVLAAPYFTVE--PEFINAAEEETVTFECKASGLPEPEIHWVHNGKPI 166
             G   +    + +  AP    E   E+     +E +T  C     P   I W  +   I
Sbjct: 480 RHGTILANVNIMIMNMAPLILTENNQEYAVVVGKE-ITMNCSVFSSPPSSISWTKDENAI 538

Query: 167 SQAPPNPRRKVG---PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
                   R +       + I N  K D+G Y C A+N  G       ++V   A +I  
Sbjct: 539 EG-----ERFLAFESGQSLRIINAEKGDSGKYTCVASNMEGSSTVTAVLDV-KDATKIVS 592

Query: 224 APKDEYTVDGKTVVLTCRV-FGAPKP---EVNWIHNQKEL-----TGGRYTILETGDLKI 274
            P++     GK   L C   + A      E+ W  + KE+        RY++ +   L+I
Sbjct: 593 PPQNTQVDSGKLAKLMCETEYDASLQDTFELVWRKDNKEIPLSSDKHSRYSV-KGAMLEI 651

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
            +V  +D G YTC AR  L     +  LTV++   + D P   E+              D
Sbjct: 652 MNVNLSDQGRYTCTARTSLDEDSATAVLTVRD---VPDAPIKLELSE-----------LD 697

Query: 335 PSLKLSIVWLRGSEP--------IDFE---------SEPRFVQSNDYSLTVTKSSELDSG 377
               + + W+ GS+         +++E          E + V  N  +  +     L+  
Sbjct: 698 SPRNVVLSWIPGSDHNSTVTEFVVEYEENRWEPGRWKELQRVTGNQATAELKLYGNLNY- 756

Query: 378 QYTCRAQTEL------DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
           Q+   A   +      +  E   T     P   P N   IQ     +  +SW P+SP   
Sbjct: 757 QFRVYAVNAIGPGPPSEPTERHKTPPA-APDRNPENIK-IQGHHPHQMEISWEPLSPLER 814

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            G    YKV+ + +   E +  E +VN+          FVP      ++L+ N    GP 
Sbjct: 815 NGPGFEYKVK-YRQLGVEDNFTEHMVNRSVFLVNNTPTFVPYE---IKILSRNSYGWGPE 870

Query: 492 SEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT- 547
            + ++  + E VP       A+  + ++   + W  V P    G L GY + +   +   
Sbjct: 871 PKPVTGYSGEDVPTAAPRDIAVEVINTTVLRVSWTPVPPATVRGRLGGYNVHWVRRRSLL 930

Query: 548 ---KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKN 604
              K+  L   + +  +   +   + GLEP ++Y++ +  + K G+G +S     V F  
Sbjct: 931 NPDKILDLSHSMSFSGN--RSHVIVPGLEPFSEYKLTVYVFNKKGNGPKSD---PVTFNT 985

Query: 605 PDNV 608
           P+ V
Sbjct: 986 PEGV 989



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 154/369 (41%), Gaps = 33/369 (8%)

Query: 55  CIFGGTPLPQTIWSKDGVP-INPSDRISQGNYGKSLIIKHVEFSD--QGSYTCEVSNGVG 111
           C   G P P+  W KDG   + P+    + N+ K L++   E     QG Y C  SN +G
Sbjct: 134 CKARGNPPPEYRWEKDGQAFVPPNFNRFKANHTKGLLVLQSEDMSKFQGKYRCYASNKLG 193

Query: 112 EAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECK-ASGLPEPEIHWVHNGKPIS 167
            A +  I++   + P F   T+ P  I  +E E +T +C    G+    I+W+     + 
Sbjct: 194 TAMTNEIEIKAFSIPKFPKETLNP--IVVSEGEPITLKCNPPEGVAPRLIYWMTVD--LQ 249

Query: 168 QAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT-NSLGYVYKDVYVNVL--------A 216
               + R  +G +  +   N  ++D+  +YGC A  N +  + +   + V+        A
Sbjct: 250 HIEQDERVSMGTDGNLYFSNAIQNDSRQDYGCFAAFNRIRTIVQKTAMAVVVKRSVAPPA 309

Query: 217 HAPEI---TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD-L 272
             P +   +    ++  + G+ + L C   G P P V WI    E+   R         L
Sbjct: 310 RIPSLLLPSGVQTEKVLLKGEDLQLECIPEGFPTPSVKWI-KMGEVMSPRVKFNNYNKLL 368

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH-ITDQPEDYEVEAGQSATFRCNA 331
            ++ V  +D G+Y C A N +G A     + V+E    +T+ P+      G     +C+ 
Sbjct: 369 SLSAVEESDEGKYMCTAENSVGKAVHYFDVIVEEPPKWLTEPPQSQLTVIGSDVHIKCSV 428

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEP-RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
              P  + +I W R    + F  +P   +Q  D ++T+  +   DSG Y C A      I
Sbjct: 429 SGKP--QPAITWRRNG--VMFRDDPDNRMQVFDDTVTLLNAKAEDSGVYQCEASNRHGTI 484

Query: 391 EAQATLTVQ 399
            A   + + 
Sbjct: 485 LANVNIMIM 493



 Score = 45.8 bits (107), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 111/275 (40%), Gaps = 39/275 (14%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDT----GNY 195
           + T+T +CKA G P PE  W  +G+     PPN  R    +   +  L+  D     G Y
Sbjct: 127 DTTITVKCKARGNPPPEYRWEKDGQAF--VPPNFNRFKANHTKGLLVLQSEDMSKFQGKY 184

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY----TVDGKTVVLTCRVFGAPKPE-V 250
            C A+N LG    +    +   A  I + PK+        +G+ + L C       P  +
Sbjct: 185 RCYASNKLGTAMTN---EIEIKAFSIPKFPKETLNPIVVSEGEPITLKCNPPEGVAPRLI 241

Query: 251 NW--IHNQKELTGGRYTILETGDLKITDVAFADS-GEYTCFAR-NKLGTAQGSGSLTVKE 306
            W  +  Q      R ++   G+L  ++    DS  +Y CFA  N++ T     ++ V  
Sbjct: 242 YWMTVDLQHIEQDERVSMGTDGNLYFSNAIQNDSRQDYGCFAAFNRIRTIVQKTAMAVVV 301

Query: 307 HTHITD--------QPEDYEVE----AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFES 354
              +           P   + E     G+     C     P+   S+ W++  E +    
Sbjct: 302 KRSVAPPARIPSLLLPSGVQTEKVLLKGEDLQLECIPEGFPT--PSVKWIKMGEVM---- 355

Query: 355 EPRFVQSNDYS--LTVTKSSELDSGQYTCRAQTEL 387
            PR V+ N+Y+  L+++   E D G+Y C A+  +
Sbjct: 356 SPR-VKFNNYNKLLSLSAVEESDEGKYMCTAENSV 389


>gi|46369977|gb|AAS89824.1| neuronal cell adhesion molecule long isoform Nc7 [Rattus
           norvegicus]
          Length = 1194

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 163/524 (31%), Positives = 240/524 (45%), Gaps = 38/524 (7%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           LR   + L CI  G P P   W K DG +P+N   R    N+ K+L I HV  +D G+Y 
Sbjct: 278 LRGNVLSLECIAEGLPTPVIYWIKEDGTLPVN---RTFYRNFKKTLQIIHVSEADSGNYQ 334

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A  ++I ++V AAPY+ V P  +  +  E  T  C+A+G P+P I W+ NG
Sbjct: 335 CIAKNALG-AVHHTISVTVKAAPYWIVAPHNLVLSPGENGTLICRANGNPKPRISWLTNG 393

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+  A  +P RK+  + I   N+++S +  Y CNA+N  GY+  + +VNVLA  P I  
Sbjct: 394 VPVEIALDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILT 453

Query: 224 APKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFA 280
           +    Y V   +  +L C  FG+P P + W    K   L    Y + + G L+I      
Sbjct: 454 SANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALHEDIYVLHDNGTLEIPVAQKD 513

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            +G YTC ARNKLG A+    L +K+ T    QPE   V+ G   +F C    D +L  +
Sbjct: 514 STGTYTCVARNKLGMAKNEVHLEIKDPTRFIKQPEYAVVQRGSKVSFECKVKHDHTLIPT 573

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I+WL+ +   +  ++ RF    D+ L V+   + D G YTC A T LD + A A L V  
Sbjct: 574 ILWLKDNG--ELPNDERFSVDKDH-LVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVA 630

Query: 401 PLEAPS----------NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG 450
           P   P+          +  L   +D K   ++W P    +       + ++        G
Sbjct: 631 PTPTPAPIYDVPNPPFDLELTNQLD-KSVQLTWTPGDDNN--SPITKFIIEYEDAMHEAG 687

Query: 451 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPG 505
             R      G  TT ++ K  P      RV+A N      PSE     +     P+  P 
Sbjct: 688 LWRHQAEVSGTQTTAQL-KLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPT 746

Query: 506 TVQSLEAIPLGSSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
            V+ L   P       + W KP    Q NG  + YK+ ++   G
Sbjct: 747 AVEGLGTEP---DNLVITW-KPLNGFQSNGPGLQYKVSWRQKDG 786



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 136/560 (24%), Positives = 236/560 (42%), Gaps = 50/560 (8%)

Query: 143 VTFECKASGLPEPEIHWVHNGK--PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
           ++ EC A GLP P I+W+      P+++      +K     + I ++ ++D+GNY C A 
Sbjct: 283 LSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKKT----LQIIHVSEADSGNYQCIAK 338

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QKE 258
           N+LG V+  + V V A AP    AP +     G+   L CR  G PKP ++W+ N    E
Sbjct: 339 NALGAVHHTISVTVKA-APYWIVAPHNLVLSPGENGTLICRANGNPKPRISWLTNGVPVE 397

Query: 259 LTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPE 315
           +     +    GD +  ++V  + S  Y C A NK G    +  + V       +T    
Sbjct: 398 IALDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILTSANT 457

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
            Y+V A + A   C     P    +I W +G++      E  +V  ++ +L +  + +  
Sbjct: 458 LYQVIANRPALLDCAFFGSP--MPTIEWFKGTKGSALH-EDIYVLHDNGTLEIPVAQKDS 514

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q    + + VS+       ++
Sbjct: 515 TGTYTCVARNKLGMAKNEVHLEIKDPTRFIKQPE-YAVVQ----RGSKVSFE----CKVK 565

Query: 433 GHFRGYKVQTWTEKDGEGSIRE-LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                     W + +GE    E   V+K     ++V      +   A     +       
Sbjct: 566 HDHTLIPTILWLKDNGELPNDERFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVSA--- 622

Query: 492 SEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
           S ++  V P   P  +  +   P           +  L W   +  N  +  + I+Y+  
Sbjct: 623 SAVLRVVAPTPTPAPIYDVPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYED- 681

Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV 600
                  L      +S  T T+A+L  L P   Y   +      G      A  +YL   
Sbjct: 682 -AMHEAGLWRHQAEVSG-TQTTAQLK-LSPYVNYSFRVMAENSIGRSVPSEASEQYLTKA 738

Query: 601 --PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDW 658
             P +NP  VEG G+ P+NLVI+W  +   + N P  +Y++ WR+ +  + W    V+  
Sbjct: 739 AEPDQNPTAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTS--VVVA 796

Query: 659 RQSELVLANQPTFQPYEIKV 678
             S+ +++  PTF PY IKV
Sbjct: 797 NVSKYIVSGTPTFVPYLIKV 816



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 96/201 (47%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A   W+PV P+S+RGH +GY++  W  +      R  I  K
Sbjct: 839  LPMVAPGNVR-VSVVNSTLAEAHWDPVPPKSVRGHLQGYRIYYWKAQSSSKRNRRHIEKK 897

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 898  ILTFQGSKTHGMLPGLQPYSHYVLNVRVVNGKGEGPASADRGFHTPEGVPSAPSSLKIVN 957

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 958  PTLDSLTLEWDPPSHPNGILTEYILKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 1013

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T  G G++
Sbjct: 1014 NFSTRYKFYFYAQTSVGSGSQ 1034



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 77/317 (24%), Positives = 121/317 (38%), Gaps = 53/317 (16%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   + I  +   K++T  G Y
Sbjct: 57  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGSGTLVINIMSEGKAETYEGVY 116

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +  V   + +P  T+   +   +  G+++VL CR   G P   + W+
Sbjct: 117 QCTARNERGAAVSNNIVVRPSRSPLWTKERLEPIILRSGQSLVLPCRPPIGLPPAIIFWM 176

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-------------------- 290
            N  Q+     R +    GDL  ++V   D+ E Y C+AR                    
Sbjct: 177 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISLKVISV 236

Query: 291 --------NKLGTAQGSGSLTVKEHTHITDQPEDYEVEA----GQSATFRCNAVSDPSLK 338
                     L   +  G+ + KE       PE  E       G   +  C A   P+  
Sbjct: 237 DELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNESHKEELRGNVLSLECIAEGLPT-- 294

Query: 339 LSIVWLR--GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             I W++  G+ P++      F ++   +L +   SE DSG Y C A+  L  +    ++
Sbjct: 295 PVIYWIKEDGTLPVNR----TFYRNFKKTLQIIHVSEADSGNYQCIAKNALGAVHHTISV 350

Query: 397 TVQVP---LEAPSNFTL 410
           TV+     + AP N  L
Sbjct: 351 TVKAAPYWIVAPHNLVL 367


>gi|358254604|dbj|GAA55926.1| neuroglian, partial [Clonorchis sinensis]
          Length = 2525

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 145/423 (34%), Positives = 201/423 (47%), Gaps = 16/423 (3%)

Query: 12  GNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDG 71
           G   LL V  T     Q  +  K  Y T + EV      + L CIF G P PQ  W KDG
Sbjct: 31  GPSYLLKVFGT-----QTNYPVKPLYNTPRTEVVTAGDILRLKCIFAGYPPPQYTWYKDG 85

Query: 72  VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN---GVGEAKSYSIDLSVLAAPYF 128
                   ++  N G  L I  V     G Y C+V+N    V     Y++ + V   P F
Sbjct: 86  KEPIELPNVNVKNLGTMLEIDPVSVEAAGEYRCQVTNEQTRVTGNMQYTVRVHV--RPTF 143

Query: 129 TVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLR 188
             +P+        +V F C A+G P P+I W  NG+  S      R+ +  N + + NL 
Sbjct: 144 VDKPQDTTVPVNGSVIFTCTATGDPAPQIRWTVNGQDPSTYLDGVRKTLQGNVMHLYNLT 203

Query: 189 KSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK-DEYTVDGKTVVLTCRVFGAPK 247
             DT    CNA+N+ GY + + Y+NV+   P   + P+ ++  VDG  V + C+ F APK
Sbjct: 204 VKDTAVIQCNASNAFGYDFVNAYLNVMREPPYFIKPPQAEQRVVDGHEVTIYCQTFSAPK 263

Query: 248 PEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEH 307
             ++W  + + ++GGRY  L TGDLKI+ VA  DSG Y C A N  G+ + SG L V+  
Sbjct: 264 ALISWTKDGRPISGGRYRSLITGDLKISSVAITDSGVYECTATNPFGSRKASGRLLVRRR 323

Query: 308 THITDQPEDYEVEAGQSATFRCNAVSDPS--LKLSIVWLRGSEPIDFESEPRFVQS-NDY 364
           T I   P D +V   Q   F C A +DP     L I W +    I+    PR  Q   DY
Sbjct: 324 TSIVLAPIDTQVYEDQVVKFVCTAETDPMELHNLEITWYKDDNLIEPNLTPRIQQIWFDY 383

Query: 365 SLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTL--IQVIDAKKAVVS 422
           SL ++ +   D+GQY C A   LD+  A A+L VQ   E      +   + I  + A+VS
Sbjct: 384 SLVLSGAQPRDTGQYRCNASNGLDYAVASASLLVQGRPEKAIRVEVNCAEFIKDELALVS 443

Query: 423 WNP 425
           W P
Sbjct: 444 WYP 446



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 11/148 (7%)

Query: 479 RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
           RVL  N  + GP S +I+  T E  PG V +L+ + +G +   + W  P +PNG+++GY+
Sbjct: 846 RVL--NTRFAGPMSPVITLNTLEDTPGPVANLQVVTIGVTYADIVWTLPAEPNGIVLGYE 903

Query: 539 IKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF 598
            + + + G ++G    R P + D   T  +L GL P+T YRI +  +T AG G ++    
Sbjct: 904 FEAKELHGLEMG-FGFRFPPLQDGNATQCRLPGLRPNTSYRITVWPFTSAGTGVDT---- 958

Query: 599 YVPFKN-PDNVEGRGSTPNNLVISWTAM 625
           ++ F   P +V     +P N V++   M
Sbjct: 959 FIDFSTAPSDV---APSPPNFVVTHIGM 983



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 4/72 (5%)

Query: 600 VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTG----EAWNQDDV 655
           VP  NP  +   GS  NNL+I WT MP IEH   +  Y +     N       A N   +
Sbjct: 526 VPATNPSELYIYGSLRNNLIIKWTTMPYIEHYGSNLGYTLKVTCLNCDIIPRTAVNNTVI 585

Query: 656 LDWRQSELVLAN 667
            DWR   + + +
Sbjct: 586 GDWRTDSITMTS 597


>gi|46369973|gb|AAS89822.1| neuronal cell adhesion molecule long isoform Nc3 [Rattus
           norvegicus]
          Length = 1198

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 163/524 (31%), Positives = 240/524 (45%), Gaps = 38/524 (7%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           LR   + L CI  G P P   W K DG +P+N   R    N+ K+L I HV  +D G+Y 
Sbjct: 278 LRGNVLSLECIAEGLPTPVIYWIKEDGTLPVN---RTFYRNFKKTLQIIHVSEADSGNYQ 334

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A  ++I ++V AAPY+ V P  +  +  E  T  C+A+G P+P I W+ NG
Sbjct: 335 CIAKNALG-AVHHTISVTVKAAPYWIVAPHNLVLSPGENGTLICRANGNPKPRISWLTNG 393

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+  A  +P RK+  + I   N+++S +  Y CNA+N  GY+  + +VNVLA  P I  
Sbjct: 394 VPVEIALDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILT 453

Query: 224 APKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFA 280
           +    Y V   +  +L C  FG+P P + W    K   L    Y + + G L+I      
Sbjct: 454 SANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALHEDIYVLHDNGTLEIPVAQKD 513

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            +G YTC ARNKLG A+    L +K+ T    QPE   V+ G   +F C    D +L  +
Sbjct: 514 STGTYTCVARNKLGMAKNEVHLEIKDPTRFIKQPEYAVVQRGSKVSFECKVKHDHTLIPT 573

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I+WL+ +   +  ++ RF    D+ L V+   + D G YTC A T LD + A A L V  
Sbjct: 574 ILWLKDNG--ELPNDERFSVDKDH-LVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVA 630

Query: 401 PLEAPS----------NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG 450
           P   P+          +  L   +D K   ++W P    +       + ++        G
Sbjct: 631 PTPTPAPIYDVPNPPFDLELTNQLD-KSVQLTWTPGDDNN--SPITKFIIEYEDAMHEAG 687

Query: 451 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPG 505
             R      G  TT ++ K  P      RV+A N      PSE     +     P+  P 
Sbjct: 688 LWRHQAEVSGTQTTAQL-KLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPT 746

Query: 506 TVQSLEAIPLGSSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
            V+ L   P       + W KP    Q NG  + YK+ ++   G
Sbjct: 747 AVEGLGTEP---DNLVITW-KPLNGFQSNGPGLQYKVSWRQKDG 786



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 136/560 (24%), Positives = 236/560 (42%), Gaps = 50/560 (8%)

Query: 143 VTFECKASGLPEPEIHWVHNGK--PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
           ++ EC A GLP P I+W+      P+++      +K     + I ++ ++D+GNY C A 
Sbjct: 283 LSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKKT----LQIIHVSEADSGNYQCIAK 338

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QKE 258
           N+LG V+  + V V A AP    AP +     G+   L CR  G PKP ++W+ N    E
Sbjct: 339 NALGAVHHTISVTVKA-APYWIVAPHNLVLSPGENGTLICRANGNPKPRISWLTNGVPVE 397

Query: 259 LTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPE 315
           +     +    GD +  ++V  + S  Y C A NK G    +  + V       +T    
Sbjct: 398 IALDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILTSANT 457

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
            Y+V A + A   C     P    +I W +G++      E  +V  ++ +L +  + +  
Sbjct: 458 LYQVIANRPALLDCAFFGSP--MPTIEWFKGTKGSALH-EDIYVLHDNGTLEIPVAQKDS 514

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q    + + VS+       ++
Sbjct: 515 TGTYTCVARNKLGMAKNEVHLEIKDPTRFIKQPE-YAVVQ----RGSKVSFE----CKVK 565

Query: 433 GHFRGYKVQTWTEKDGEGSIRE-LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                     W + +GE    E   V+K     ++V      +   A     +       
Sbjct: 566 HDHTLIPTILWLKDNGELPNDERFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVSA--- 622

Query: 492 SEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
           S ++  V P   P  +  +   P           +  L W   +  N  +  + I+Y+  
Sbjct: 623 SAVLRVVAPTPTPAPIYDVPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYED- 681

Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV 600
                  L      +S  T T+A+L  L P   Y   +      G      A  +YL   
Sbjct: 682 -AMHEAGLWRHQAEVSG-TQTTAQLK-LSPYVNYSFRVMAENSIGRSVPSEASEQYLTKA 738

Query: 601 --PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDW 658
             P +NP  VEG G+ P+NLVI+W  +   + N P  +Y++ WR+ +  + W    V+  
Sbjct: 739 AEPDQNPTAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTS--VVVA 796

Query: 659 RQSELVLANQPTFQPYEIKV 678
             S+ +++  PTF PY IKV
Sbjct: 797 NVSKYIVSGTPTFVPYLIKV 816



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 96/201 (47%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A   W+PV P+S+RGH +GY++  W  +      R  I  K
Sbjct: 839  LPMVAPGNVR-VSVVNSTLAEAHWDPVPPKSVRGHLQGYRIYYWKAQSSSKRNRRHIEKK 897

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 898  ILTFQGSKTHGMLPGLQPYSHYVLNVRVVNGKGEGPASADRGFHTPEGVPSAPSSLKIVN 957

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 958  PTLDSLTLEWDPPSHPNGILTEYILKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 1013

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T  G G++
Sbjct: 1014 NFSTRYKFYFYAQTSVGSGSQ 1034



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 77/317 (24%), Positives = 121/317 (38%), Gaps = 53/317 (16%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   + I  +   K++T  G Y
Sbjct: 57  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGSGTLVINIMSEGKAETYEGVY 116

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +  V   + +P  T+   +   +  G+++VL CR   G P   + W+
Sbjct: 117 QCTARNERGAAVSNNIVVRPSRSPLWTKERLEPIILRSGQSLVLPCRPPIGLPPAIIFWM 176

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-------------------- 290
            N  Q+     R +    GDL  ++V   D+ E Y C+AR                    
Sbjct: 177 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISLKVISV 236

Query: 291 --------NKLGTAQGSGSLTVKEHTHITDQPEDYEVEA----GQSATFRCNAVSDPSLK 338
                     L   +  G+ + KE       PE  E       G   +  C A   P+  
Sbjct: 237 DELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNESHKEELRGNVLSLECIAEGLPT-- 294

Query: 339 LSIVWLR--GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             I W++  G+ P++      F ++   +L +   SE DSG Y C A+  L  +    ++
Sbjct: 295 PVIYWIKEDGTLPVNR----TFYRNFKKTLQIIHVSEADSGNYQCIAKNALGAVHHTISV 350

Query: 397 TVQVP---LEAPSNFTL 410
           TV+     + AP N  L
Sbjct: 351 TVKAAPYWIVAPHNLVL 367


>gi|46369971|gb|AAS89821.1| neuronal cell adhesion molecule long isoform Nc14 [Rattus
           norvegicus]
          Length = 1197

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 163/524 (31%), Positives = 240/524 (45%), Gaps = 38/524 (7%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           LR   + L CI  G P P   W K DG +P+N   R    N+ K+L I HV  +D G+Y 
Sbjct: 278 LRGNVLSLECIAEGLPTPVIYWIKEDGTLPVN---RTFYRNFKKTLQIIHVSEADSGNYQ 334

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A  ++I ++V AAPY+ V P  +  +  E  T  C+A+G P+P I W+ NG
Sbjct: 335 CIAKNALG-AVHHTISVTVKAAPYWIVAPHNLVLSPGENGTLICRANGNPKPRISWLTNG 393

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+  A  +P RK+  + I   N+++S +  Y CNA+N  GY+  + +VNVLA  P I  
Sbjct: 394 VPVEIALDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILT 453

Query: 224 APKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFA 280
           +    Y V   +  +L C  FG+P P + W    K   L    Y + + G L+I      
Sbjct: 454 SANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALHEDIYVLHDNGTLEIPVAQKD 513

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            +G YTC ARNKLG A+    L +K+ T    QPE   V+ G   +F C    D +L  +
Sbjct: 514 STGTYTCVARNKLGMAKNEVHLEIKDPTRFIKQPEYAVVQRGSKVSFECKVKHDHTLIPT 573

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I+WL+ +   +  ++ RF    D+ L V+   + D G YTC A T LD + A A L V  
Sbjct: 574 ILWLKDNG--ELPNDERFSVDKDH-LVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVA 630

Query: 401 PLEAPS----------NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG 450
           P   P+          +  L   +D K   ++W P    +       + ++        G
Sbjct: 631 PTPTPAPIYDVPNPPFDLELTNQLD-KSVQLTWTPGDDNN--SPITKFIIEYEDAMHEAG 687

Query: 451 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPG 505
             R      G  TT ++ K  P      RV+A N      PSE     +     P+  P 
Sbjct: 688 LWRHQAEVSGTQTTAQL-KLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPT 746

Query: 506 TVQSLEAIPLGSSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
            V+ L   P       + W KP    Q NG  + YK+ ++   G
Sbjct: 747 AVEGLGTEP---DNLVITW-KPLNGFQSNGPGLQYKVSWRQKDG 786



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 136/560 (24%), Positives = 236/560 (42%), Gaps = 50/560 (8%)

Query: 143 VTFECKASGLPEPEIHWVHNGK--PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
           ++ EC A GLP P I+W+      P+++      +K     + I ++ ++D+GNY C A 
Sbjct: 283 LSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKKT----LQIIHVSEADSGNYQCIAK 338

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QKE 258
           N+LG V+  + V V A AP    AP +     G+   L CR  G PKP ++W+ N    E
Sbjct: 339 NALGAVHHTISVTVKA-APYWIVAPHNLVLSPGENGTLICRANGNPKPRISWLTNGVPVE 397

Query: 259 LTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPE 315
           +     +    GD +  ++V  + S  Y C A NK G    +  + V       +T    
Sbjct: 398 IALDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILTSANT 457

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
            Y+V A + A   C     P    +I W +G++      E  +V  ++ +L +  + +  
Sbjct: 458 LYQVIANRPALLDCAFFGSP--MPTIEWFKGTKGSALH-EDIYVLHDNGTLEIPVAQKDS 514

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q    + + VS+       ++
Sbjct: 515 TGTYTCVARNKLGMAKNEVHLEIKDPTRFIKQPE-YAVVQ----RGSKVSFE----CKVK 565

Query: 433 GHFRGYKVQTWTEKDGEGSIRE-LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                     W + +GE    E   V+K     ++V      +   A     +       
Sbjct: 566 HDHTLIPTILWLKDNGELPNDERFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVSA--- 622

Query: 492 SEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
           S ++  V P   P  +  +   P           +  L W   +  N  +  + I+Y+  
Sbjct: 623 SAVLRVVAPTPTPAPIYDVPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYED- 681

Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV 600
                  L      +S  T T+A+L  L P   Y   +      G      A  +YL   
Sbjct: 682 -AMHEAGLWRHQAEVSG-TQTTAQLK-LSPYVNYSFRVMAENSIGRSVPSEASEQYLTKA 738

Query: 601 --PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDW 658
             P +NP  VEG G+ P+NLVI+W  +   + N P  +Y++ WR+ +  + W    V+  
Sbjct: 739 AEPDQNPTAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTS--VVVA 796

Query: 659 RQSELVLANQPTFQPYEIKV 678
             S+ +++  PTF PY IKV
Sbjct: 797 NVSKYIVSGTPTFVPYLIKV 816



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 96/201 (47%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A   W+PV P+S+RGH +GY++  W  +      R  I  K
Sbjct: 839  LPMVAPGNVR-VSVVNSTLAEAHWDPVPPKSVRGHLQGYRIYYWKAQSSSKRNRRHIEKK 897

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 898  ILTFQGSKTHGMLPGLQPYSHYVLNVRVVNGKGEGPASADRGFHTPEGVPSAPSSLKIVN 957

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 958  PTLDSLTLEWDPPSHPNGILTEYILKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 1013

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T  G G++
Sbjct: 1014 NFSTRYKFYFYAQTSVGSGSQ 1034



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 77/317 (24%), Positives = 121/317 (38%), Gaps = 53/317 (16%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   + I  +   K++T  G Y
Sbjct: 57  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGSGTLVINIMSEGKAETYEGVY 116

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +  V   + +P  T+   +   +  G+++VL CR   G P   + W+
Sbjct: 117 QCTARNERGAAVSNNIVVRPSRSPLWTKERLEPIILRSGQSLVLPCRPPIGLPPAIIFWM 176

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-------------------- 290
            N  Q+     R +    GDL  ++V   D+ E Y C+AR                    
Sbjct: 177 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISLKVISV 236

Query: 291 --------NKLGTAQGSGSLTVKEHTHITDQPEDYEVEA----GQSATFRCNAVSDPSLK 338
                     L   +  G+ + KE       PE  E       G   +  C A   P+  
Sbjct: 237 DELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNESHKEELRGNVLSLECIAEGLPT-- 294

Query: 339 LSIVWLR--GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             I W++  G+ P++      F ++   +L +   SE DSG Y C A+  L  +    ++
Sbjct: 295 PVIYWIKEDGTLPVNR----TFYRNFKKTLQIIHVSEADSGNYQCIAKNALGAVHHTISV 350

Query: 397 TVQVP---LEAPSNFTL 410
           TV+     + AP N  L
Sbjct: 351 TVKAAPYWIVAPHNLVL 367


>gi|46369969|gb|AAS89820.1| neuronal cell adhesion molecule long isoform Nc1 [Rattus
           norvegicus]
          Length = 1209

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 163/524 (31%), Positives = 240/524 (45%), Gaps = 38/524 (7%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           LR   + L CI  G P P   W K DG +P+N   R    N+ K+L I HV  +D G+Y 
Sbjct: 278 LRGNVLSLECIAEGLPTPVIYWIKEDGTLPVN---RTFYRNFKKTLQIIHVSEADSGNYQ 334

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A  ++I ++V AAPY+ V P  +  +  E  T  C+A+G P+P I W+ NG
Sbjct: 335 CIAKNALG-AVHHTISVTVKAAPYWIVAPHNLVLSPGENGTLICRANGNPKPRISWLTNG 393

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+  A  +P RK+  + I   N+++S +  Y CNA+N  GY+  + +VNVLA  P I  
Sbjct: 394 VPVEIALDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILT 453

Query: 224 APKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFA 280
           +    Y V   +  +L C  FG+P P + W    K   L    Y + + G L+I      
Sbjct: 454 SANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALHEDIYVLHDNGTLEIPVAQKD 513

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            +G YTC ARNKLG A+    L +K+ T    QPE   V+ G   +F C    D +L  +
Sbjct: 514 STGTYTCVARNKLGMAKNEVHLEIKDPTRFIKQPEYAVVQRGSKVSFECKVKHDHTLIPT 573

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I+WL+ +   +  ++ RF    D+ L V+   + D G YTC A T LD + A A L V  
Sbjct: 574 ILWLKDNG--ELPNDERFSVDKDH-LVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVA 630

Query: 401 PLEAPS----------NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG 450
           P   P+          +  L   +D K   ++W P    +       + ++        G
Sbjct: 631 PTPTPAPIYDVPNPPFDLELTNQLD-KSVQLTWTPGDDNN--SPITKFIIEYEDAMHEAG 687

Query: 451 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPG 505
             R      G  TT ++ K  P      RV+A N      PSE     +     P+  P 
Sbjct: 688 LWRHQAEVSGTQTTAQL-KLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPT 746

Query: 506 TVQSLEAIPLGSSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
            V+ L   P       + W KP    Q NG  + YK+ ++   G
Sbjct: 747 AVEGLGTEP---DNLVITW-KPLNGFQSNGPGLQYKVSWRQKDG 786



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 136/560 (24%), Positives = 236/560 (42%), Gaps = 50/560 (8%)

Query: 143 VTFECKASGLPEPEIHWVHNGK--PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
           ++ EC A GLP P I+W+      P+++      +K     + I ++ ++D+GNY C A 
Sbjct: 283 LSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKKT----LQIIHVSEADSGNYQCIAK 338

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QKE 258
           N+LG V+  + V V A AP    AP +     G+   L CR  G PKP ++W+ N    E
Sbjct: 339 NALGAVHHTISVTVKA-APYWIVAPHNLVLSPGENGTLICRANGNPKPRISWLTNGVPVE 397

Query: 259 LTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPE 315
           +     +    GD +  ++V  + S  Y C A NK G    +  + V       +T    
Sbjct: 398 IALDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILTSANT 457

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
            Y+V A + A   C     P    +I W +G++      E  +V  ++ +L +  + +  
Sbjct: 458 LYQVIANRPALLDCAFFGSP--MPTIEWFKGTKGSALH-EDIYVLHDNGTLEIPVAQKDS 514

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q    + + VS+       ++
Sbjct: 515 TGTYTCVARNKLGMAKNEVHLEIKDPTRFIKQPE-YAVVQ----RGSKVSFE----CKVK 565

Query: 433 GHFRGYKVQTWTEKDGEGSIRE-LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                     W + +GE    E   V+K     ++V      +   A     +       
Sbjct: 566 HDHTLIPTILWLKDNGELPNDERFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVSA--- 622

Query: 492 SEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
           S ++  V P   P  +  +   P           +  L W   +  N  +  + I+Y+  
Sbjct: 623 SAVLRVVAPTPTPAPIYDVPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYED- 681

Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV 600
                  L      +S  T T+A+L  L P   Y   +      G      A  +YL   
Sbjct: 682 -AMHEAGLWRHQAEVSG-TQTTAQLK-LSPYVNYSFRVMAENSIGRSVPSEASEQYLTKA 738

Query: 601 --PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDW 658
             P +NP  VEG G+ P+NLVI+W  +   + N P  +Y++ WR+ +  + W    V+  
Sbjct: 739 AEPDQNPTAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTS--VVVA 796

Query: 659 RQSELVLANQPTFQPYEIKV 678
             S+ +++  PTF PY IKV
Sbjct: 797 NVSKYIVSGTPTFVPYLIKV 816



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 96/201 (47%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A   W+PV P+S+RGH +GY++  W  +      R  I  K
Sbjct: 839  LPMVAPGNVR-VSVVNSTLAEAHWDPVPPKSVRGHLQGYRIYYWKAQSSSKRNRRHIEKK 897

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 898  ILTFQGSKTHGMLPGLQPYSHYVLNVRVVNGKGEGPASADRGFHTPEGVPSAPSSLKIVN 957

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 958  PTLDSLTLEWDPPSHPNGILTEYILKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 1013

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T  G G++
Sbjct: 1014 NFSTRYKFYFYAQTSVGSGSQ 1034



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 77/317 (24%), Positives = 121/317 (38%), Gaps = 53/317 (16%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   + I  +   K++T  G Y
Sbjct: 57  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGSGTLVINIMSEGKAETYEGVY 116

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +  V   + +P  T+   +   +  G+++VL CR   G P   + W+
Sbjct: 117 QCTARNERGAAVSNNIVVRPSRSPLWTKERLEPIILRSGQSLVLPCRPPIGLPPAIIFWM 176

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-------------------- 290
            N  Q+     R +    GDL  ++V   D+ E Y C+AR                    
Sbjct: 177 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISLKVISV 236

Query: 291 --------NKLGTAQGSGSLTVKEHTHITDQPEDYEVEA----GQSATFRCNAVSDPSLK 338
                     L   +  G+ + KE       PE  E       G   +  C A   P+  
Sbjct: 237 DELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNESHKEELRGNVLSLECIAEGLPT-- 294

Query: 339 LSIVWLR--GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             I W++  G+ P++      F ++   +L +   SE DSG Y C A+  L  +    ++
Sbjct: 295 PVIYWIKEDGTLPVNR----TFYRNFKKTLQIIHVSEADSGNYQCIAKNALGAVHHTISV 350

Query: 397 TVQVP---LEAPSNFTL 410
           TV+     + AP N  L
Sbjct: 351 TVKAAPYWIVAPHNLVL 367


>gi|46369975|gb|AAS89823.1| neuronal cell adhesion molecule long isoform Nc6 [Rattus
           norvegicus]
          Length = 1206

 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 163/524 (31%), Positives = 240/524 (45%), Gaps = 38/524 (7%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           LR   + L CI  G P P   W K DG +P+N   R    N+ K+L I HV  +D G+Y 
Sbjct: 278 LRGNVLSLECIAEGLPTPVIYWIKEDGTLPVN---RTFYRNFKKTLQIIHVSEADSGNYQ 334

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A  ++I ++V AAPY+ V P  +  +  E  T  C+A+G P+P I W+ NG
Sbjct: 335 CIAKNALG-AVHHTISVTVKAAPYWIVAPHNLVLSPGENGTLICRANGNPKPRISWLTNG 393

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+  A  +P RK+  + I   N+++S +  Y CNA+N  GY+  + +VNVLA  P I  
Sbjct: 394 VPVEIALDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILT 453

Query: 224 APKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFA 280
           +    Y V   +  +L C  FG+P P + W    K   L    Y + + G L+I      
Sbjct: 454 SANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALHEDIYVLHDNGTLEIPVAQKD 513

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            +G YTC ARNKLG A+    L +K+ T    QPE   V+ G   +F C    D +L  +
Sbjct: 514 STGTYTCVARNKLGMAKNEVHLEIKDPTRFIKQPEYAVVQRGSKVSFECKVKHDHTLIPT 573

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I+WL+ +   +  ++ RF    D+ L V+   + D G YTC A T LD + A A L V  
Sbjct: 574 ILWLKDNG--ELPNDERFSVDKDH-LVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVA 630

Query: 401 PLEAPS----------NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG 450
           P   P+          +  L   +D K   ++W P    +       + ++        G
Sbjct: 631 PTPTPAPIYDVPNPPFDLELTNQLD-KSVQLTWTPGDDNN--SPITKFIIEYEDAMHEAG 687

Query: 451 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPG 505
             R      G  TT ++ K  P      RV+A N      PSE     +     P+  P 
Sbjct: 688 LWRHQAEVSGTQTTAQL-KLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPT 746

Query: 506 TVQSLEAIPLGSSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
            V+ L   P       + W KP    Q NG  + YK+ ++   G
Sbjct: 747 AVEGLGTEP---DNLVITW-KPLNGFQSNGPGLQYKVSWRQKDG 786



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 136/560 (24%), Positives = 236/560 (42%), Gaps = 50/560 (8%)

Query: 143 VTFECKASGLPEPEIHWVHNGK--PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
           ++ EC A GLP P I+W+      P+++      +K     + I ++ ++D+GNY C A 
Sbjct: 283 LSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKKT----LQIIHVSEADSGNYQCIAK 338

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QKE 258
           N+LG V+  + V V A AP    AP +     G+   L CR  G PKP ++W+ N    E
Sbjct: 339 NALGAVHHTISVTVKA-APYWIVAPHNLVLSPGENGTLICRANGNPKPRISWLTNGVPVE 397

Query: 259 LTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPE 315
           +     +    GD +  ++V  + S  Y C A NK G    +  + V       +T    
Sbjct: 398 IALDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILTSANT 457

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
            Y+V A + A   C     P    +I W +G++      E  +V  ++ +L +  + +  
Sbjct: 458 LYQVIANRPALLDCAFFGSP--MPTIEWFKGTKGSALH-EDIYVLHDNGTLEIPVAQKDS 514

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q    + + VS+       ++
Sbjct: 515 TGTYTCVARNKLGMAKNEVHLEIKDPTRFIKQPE-YAVVQ----RGSKVSFE----CKVK 565

Query: 433 GHFRGYKVQTWTEKDGEGSIRE-LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                     W + +GE    E   V+K     ++V      +   A     +       
Sbjct: 566 HDHTLIPTILWLKDNGELPNDERFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVSA--- 622

Query: 492 SEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
           S ++  V P   P  +  +   P           +  L W   +  N  +  + I+Y+  
Sbjct: 623 SAVLRVVAPTPTPAPIYDVPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYED- 681

Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV 600
                  L      +S  T T+A+L  L P   Y   +      G      A  +YL   
Sbjct: 682 -AMHEAGLWRHQAEVSG-TQTTAQLK-LSPYVNYSFRVMAENSIGRSVPSEASEQYLTKA 738

Query: 601 --PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDW 658
             P +NP  VEG G+ P+NLVI+W  +   + N P  +Y++ WR+ +  + W    V+  
Sbjct: 739 AEPDQNPTAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTS--VVVA 796

Query: 659 RQSELVLANQPTFQPYEIKV 678
             S+ +++  PTF PY IKV
Sbjct: 797 NVSKYIVSGTPTFVPYLIKV 816



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 96/201 (47%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A   W+PV P+S+RGH +GY++  W  +      R  I  K
Sbjct: 839  LPMVAPGNVR-VSVVNSTLAEAHWDPVPPKSVRGHLQGYRIYYWKAQSSSKRNRRHIEKK 897

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 898  ILTFQGSKTHGMLPGLQPYSHYVLNVRVVNGKGEGPASADRGFHTPEGVPSAPSSLKIVN 957

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 958  PTLDSLTLEWDPPSHPNGILTEYILKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 1013

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T  G G++
Sbjct: 1014 NFSTRYKFYFYAQTSVGSGSQ 1034



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 77/317 (24%), Positives = 121/317 (38%), Gaps = 53/317 (16%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   + I  +   K++T  G Y
Sbjct: 57  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGSGTLVINIMSEGKAETYEGVY 116

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +  V   + +P  T+   +   +  G+++VL CR   G P   + W+
Sbjct: 117 QCTARNERGAAVSNNIVVRPSRSPLWTKERLEPIILRSGQSLVLPCRPPIGLPPAIIFWM 176

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-------------------- 290
            N  Q+     R +    GDL  ++V   D+ E Y C+AR                    
Sbjct: 177 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISLKVISV 236

Query: 291 --------NKLGTAQGSGSLTVKEHTHITDQPEDYEVEA----GQSATFRCNAVSDPSLK 338
                     L   +  G+ + KE       PE  E       G   +  C A   P+  
Sbjct: 237 DELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNESHKEELRGNVLSLECIAEGLPT-- 294

Query: 339 LSIVWLR--GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             I W++  G+ P++      F ++   +L +   SE DSG Y C A+  L  +    ++
Sbjct: 295 PVIYWIKEDGTLPVNR----TFYRNFKKTLQIIHVSEADSGNYQCIAKNALGAVHHTISV 350

Query: 397 TVQVP---LEAPSNFTL 410
           TV+     + AP N  L
Sbjct: 351 TVKAAPYWIVAPHNLVL 367


>gi|149051179|gb|EDM03352.1| rCG62174, isoform CRA_a [Rattus norvegicus]
          Length = 1205

 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 163/524 (31%), Positives = 240/524 (45%), Gaps = 38/524 (7%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           LR   + L CI  G P P   W K DG +P+N   R    N+ K+L I HV  +D G+Y 
Sbjct: 277 LRGNVLSLECIAEGLPTPVIYWIKEDGTLPVN---RTFYRNFKKTLQIIHVSEADSGNYQ 333

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A  ++I ++V AAPY+ V P  +  +  E  T  C+A+G P+P I W+ NG
Sbjct: 334 CIAKNALG-AVHHTISVTVKAAPYWIVAPHNLVLSPGENGTLICRANGNPKPRISWLTNG 392

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+  A  +P RK+  + I   N+++S +  Y CNA+N  GY+  + +VNVLA  P I  
Sbjct: 393 VPVEIALDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILT 452

Query: 224 APKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFA 280
           +    Y V   +  +L C  FG+P P + W    K   L    Y + + G L+I      
Sbjct: 453 SANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALHEDIYVLHDNGTLEIPVAQKD 512

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            +G YTC ARNKLG A+    L +K+ T    QPE   V+ G   +F C    D +L  +
Sbjct: 513 STGTYTCVARNKLGMAKNEVHLEIKDPTRFIKQPEYAVVQRGSKVSFECKVKHDHTLIPT 572

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I+WL+ +   +  ++ RF    D+ L V+   + D G YTC A T LD + A A L V  
Sbjct: 573 ILWLKDNG--ELPNDERFSVDKDH-LVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVA 629

Query: 401 PLEAPS----------NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG 450
           P   P+          +  L   +D K   ++W P    +       + ++        G
Sbjct: 630 PTPTPAPIYDVPNPPFDLELTNQLD-KSVQLTWTPGDDNN--SPITKFIIEYEDAMHEAG 686

Query: 451 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPG 505
             R      G  TT ++ K  P      RV+A N      PSE     +     P+  P 
Sbjct: 687 LWRHQAEVSGTQTTAQL-KLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPT 745

Query: 506 TVQSLEAIPLGSSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
            V+ L   P       + W KP    Q NG  + YK+ ++   G
Sbjct: 746 AVEGLGTEP---DNLVITW-KPLNGFQSNGPGLQYKVSWRQKDG 785



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 136/560 (24%), Positives = 236/560 (42%), Gaps = 50/560 (8%)

Query: 143 VTFECKASGLPEPEIHWVHNGK--PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
           ++ EC A GLP P I+W+      P+++      +K     + I ++ ++D+GNY C A 
Sbjct: 282 LSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKKT----LQIIHVSEADSGNYQCIAK 337

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QKE 258
           N+LG V+  + V V A AP    AP +     G+   L CR  G PKP ++W+ N    E
Sbjct: 338 NALGAVHHTISVTVKA-APYWIVAPHNLVLSPGENGTLICRANGNPKPRISWLTNGVPVE 396

Query: 259 LTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPE 315
           +     +    GD +  ++V  + S  Y C A NK G    +  + V       +T    
Sbjct: 397 IALDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILTSANT 456

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
            Y+V A + A   C     P    +I W +G++      E  +V  ++ +L +  + +  
Sbjct: 457 LYQVIANRPALLDCAFFGSP--MPTIEWFKGTKGSALH-EDIYVLHDNGTLEIPVAQKDS 513

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q    + + VS+       ++
Sbjct: 514 TGTYTCVARNKLGMAKNEVHLEIKDPTRFIKQPE-YAVVQ----RGSKVSFE----CKVK 564

Query: 433 GHFRGYKVQTWTEKDGEGSIRE-LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                     W + +GE    E   V+K     ++V      +   A     +       
Sbjct: 565 HDHTLIPTILWLKDNGELPNDERFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVSA--- 621

Query: 492 SEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
           S ++  V P   P  +  +   P           +  L W   +  N  +  + I+Y+  
Sbjct: 622 SAVLRVVAPTPTPAPIYDVPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYED- 680

Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV 600
                  L      +S  T T+A+L  L P   Y   +      G      A  +YL   
Sbjct: 681 -AMHEAGLWRHQAEVSG-TQTTAQLK-LSPYVNYSFRVMAENSIGRSVPSEASEQYLTKA 737

Query: 601 --PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDW 658
             P +NP  VEG G+ P+NLVI+W  +   + N P  +Y++ WR+ +  + W    V+  
Sbjct: 738 AEPDQNPTAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTS--VVVA 795

Query: 659 RQSELVLANQPTFQPYEIKV 678
             S+ +++  PTF PY IKV
Sbjct: 796 NVSKYIVSGTPTFVPYLIKV 815



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 96/201 (47%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A   W+PV P+S+RGH +GY++  W  +      R  I  K
Sbjct: 838  LPMVAPGNVR-VSVVNSTLAEAHWDPVPPKSVRGHLQGYRIYYWKAQSSSKRNRRHIEKK 896

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 897  ILTFQGSKTHGMLPGLQPYSHYVLNVRVVNGKGEGPASADRGFHTPEGVPSAPSSLKIVN 956

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 957  PTLDSLTLEWDPPSHPNGILTEYILKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 1012

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T  G G++
Sbjct: 1013 NFSTRYKFYFYAQTSVGSGSQ 1033



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 129/346 (37%), Gaps = 61/346 (17%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNGKPIS-QAP 170
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  ISALDVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKD 86

Query: 171 PNPRRKVGPNRITIENLR--KSDT--GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
           P    K G   + I  +   K++T  G Y C A N  G    +  V   + +P  T+   
Sbjct: 87  PLVTMKPGSGTLVINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKERL 146

Query: 227 DEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKITDVAFADS 282
           +   +  G+++VL CR   G P   + W+ N  Q+     R +    GDL  ++V   D+
Sbjct: 147 EPIILRSGQSLVLPCRPPIGLPPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDT 206

Query: 283 GE-YTCFAR----------------------------NKLGTAQGSGSLTVKEHTHITDQ 313
            E Y C+AR                              L   +  G+ + KE       
Sbjct: 207 REDYICYARFNHTQTIQQKQPISLKVISVDELNDTIAANLSDTEFYGAKSSKERPPTFLT 266

Query: 314 PEDYEVEA----GQSATFRCNAVSDPSLKLSIVWLR--GSEPIDFESEPRFVQSNDYSLT 367
           PE  E       G   +  C A   P+    I W++  G+ P++      F ++   +L 
Sbjct: 267 PEGNESHKEELRGNVLSLECIAEGLPT--PVIYWIKEDGTLPVNR----TFYRNFKKTLQ 320

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
           +   SE DSG Y C A+  L  +    ++TV+     + AP N  L
Sbjct: 321 IIHVSEADSGNYQCIAKNALGAVHHTISVTVKAAPYWIVAPHNLVL 366


>gi|26342350|dbj|BAC34837.1| unnamed protein product [Mus musculus]
          Length = 895

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 175/596 (29%), Positives = 256/596 (42%), Gaps = 34/596 (5%)

Query: 50  KVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV- 106
           +V + C+    PL +   +W KDG P+  S  IS  +Y + L I +   SD G Y CE  
Sbjct: 236 EVTMECVVNARPLIKLHIVWKKDGAPL--SSGIS--DYNRRLTIANPTVSDAGYYECEAM 291

Query: 107 --SNGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPEPEIHWVHNG 163
             S+ V      +  LSVL  P F  EPE  I A  E+ V   C+A G+P P I W  + 
Sbjct: 292 LRSSSVAPVTRGAY-LSVLEPPQFVREPERHITAEMEKVVDIPCRAKGVPPPSITWYKDA 350

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +        ++     + I  L   DTG   C A N+ G      Y+ V + AP IT 
Sbjct: 351 ALVEVGKLTRFKQRSDGGLQISGLLPDDTGMLQCFAHNAAGEAQTSTYLAVTSIAPNITR 410

Query: 224 APKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDVA 278
            P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T+LE+G L I+   
Sbjct: 411 GPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLISPTH 470

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+  C    DP + 
Sbjct: 471 ISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVCGVTHDPRVT 530

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           +  VW +    +  E+ PR     + SL ++++   D G YTCR  +        A L V
Sbjct: 531 VRYVWEKDGATLAVETNPRIRLDRNGSLHISQTWSGDIGTYTCRVLSAGGNDSRNAHLRV 590

Query: 399 QVPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIV 457
           +    AP +    +  ++ +   ++W    P         Y ++  +E +   +I    V
Sbjct: 591 RQLPHAPEHPVATLSTVERRAINLTW--AKPFDGNSPLMRYVLEM-SENNAPWTILLASV 647

Query: 458 NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS 517
           +  E+T+  V   VPA     R+ A N    G  S+    V+    P T      I  G 
Sbjct: 648 DP-EATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGR 706

Query: 518 S--AFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLE 573
           +  +  ++W  P     NG+L GY I+Y  + G  VG    +   I+D    +  L  L 
Sbjct: 707 TNQSIMIQWQPPPESHQNGILKGYIIRY-CLAGLPVG---YQFKNITDADVNNLLLEDLI 762

Query: 574 PSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLVISWTA 624
             T Y I +A Y  AG G  S       L  VP   P NV    +    +  +W A
Sbjct: 763 IWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTWNA 818



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 181/684 (26%), Positives = 270/684 (39%), Gaps = 75/684 (10%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K+Q V   +   +R  ++  F      P PQ  W +DG  I PS RI+      +L+I  
Sbjct: 124 KRQSVNHGEAAVIRAPRISSF------PRPQVTWFRDGRKIPPSSRIAI-TLENTLVILS 176

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFINAAEEET------- 142
               D G Y  + V++  G+ K S  I L+V  +  P   + P  I   +  +       
Sbjct: 177 TVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSE 236

Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
           VT EC  +  P  ++H  W  +G P+S    +  R     R+TI N   SD G Y C A 
Sbjct: 237 VTMECVVNARPLIKLHIVWKKDGAPLSSGISDYNR-----RLTIANPTVSDAGYYECEAM 291

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+  V +  Y++VL   P+    P+   T + + VV + CR  G P P + W  + 
Sbjct: 292 LRSSSVAPVTRGAYLSVL-EPPQFVREPERHITAEMEKVVDIPCRAKGVPPPSITWYKDA 350

Query: 257 KELTGGRYTILET---GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITD 312
             +  G+ T  +    G L+I+ +   D+G   CFA N  G AQ S  L V     +IT 
Sbjct: 351 ALVEVGKLTRFKQRSDGGLQISGLLPDDTGMLQCFAHNAAGEAQTSTYLAVTSIAPNITR 410

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTK 370
            P D  V  G S    C     P  + +I W +G   +   S   PRF      SL ++ 
Sbjct: 411 GPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTLLESGSLLISP 468

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQS 430
           +   D+G YTC A       EA A L V          T I      ++V+     S   
Sbjct: 469 THISDAGTYTCLATNSRGVDEASADLVVWA-------RTRITKPPQDQSVIKGTQASMVC 521

Query: 431 LRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFA--------RVLA 482
              H     V+   EKDG      L V        + +  +  S+ ++        RVL+
Sbjct: 522 GVTHDPRVTVRYVWEKDGA----TLAVETNPRIRLDRNGSLHISQTWSGDIGTYTCRVLS 577

Query: 483 FNGAYNGPPSEIISFV--TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
             G  +      +  +   PE    T+ ++E       A  L W KP   N  LM Y ++
Sbjct: 578 AGGNDSRNAHLRVRQLPHAPEHPVATLSTVE-----RRAINLTWAKPFDGNSPLMRYVLE 632

Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV 600
             S        LL  +    DP  TS  + GL P+  Y+  L      G G  SK    V
Sbjct: 633 -MSENNAPWTILLASV----DPEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERV 687

Query: 601 ------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
                 P   P NV   G T  +++I W   PE   N     Y I +        +   +
Sbjct: 688 SLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKN 747

Query: 655 VLDWRQSELVLANQPTFQPYEIKV 678
           + D   + L+L +   +  YEI+V
Sbjct: 748 ITDADVNNLLLEDLIIWTNYEIEV 771



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 105/274 (38%), Gaps = 27/274 (9%)

Query: 126 PYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
           PYF  EP       E   +   C A G    E  W+HN + ++       R     R  I
Sbjct: 30  PYFKTEPVRTQVHLEGNRLVLTCMAEGSWPLEFKWLHNNRELT-------RFSLEYRYMI 82

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RVF 243
            +L ++  G Y C   N +G + +      +A+     E  K +    G+  V+   R+ 
Sbjct: 83  TSLDRTHAGFYRCIVRNRMGALLQRQTEVQVAYMGSFEEGEKRQSVNHGEAAVIRAPRIS 142

Query: 244 GAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSGS 301
             P+P+V W  + +++    R  I     L I      D+G Y   A N K G  + S  
Sbjct: 143 SFPRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQP 202

Query: 302 LTVK----------EHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEPI 350
           +T+               I   P++  V AG S  T  C   + P +KL IVW +   P+
Sbjct: 203 ITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVVNARPLIKLHIVWKKDGAPL 262

Query: 351 DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
                   +   +  LT+   +  D+G Y C A 
Sbjct: 263 S-----SGISDYNRRLTIANPTVSDAGYYECEAM 291


>gi|351701670|gb|EHB04589.1| Protein sidekick-2, partial [Heterocephalus glaber]
          Length = 2137

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 180/608 (29%), Positives = 258/608 (42%), Gaps = 38/608 (6%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVE 95
           +   V     +V + C+    PL +   IW K G       ++S G  +Y + L I +  
Sbjct: 204 KNTSVVAGTSEVTMECVANARPLTKLHIIWKKGGA------QVSSGLSDYNRRLTIPNPT 257

Query: 96  FSDQGSYTCEV---SNGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASG 151
             D G Y CE    S+ V  A      LSVL  P F  EPE  I A  E+ V   C+A G
Sbjct: 258 VGDAGYYQCEAVLRSSSVAPAVR-GAHLSVLEPPQFVKEPERHITAEMEKVVDIPCRAKG 316

Query: 152 LPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVY 211
           +P P I W  +   +        R+ G   + I  L   DTG + C A NS G V    Y
Sbjct: 317 VPAPSITWYKDAAVVEVEKLARFRQRGDGGLQISGLVPDDTGMFQCFARNSAGEVQTSTY 376

Query: 212 VNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTI 266
           + V + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T+
Sbjct: 377 LAVTSIAPNITRGPLDSTVIDGTSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTL 436

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
           LE+G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+
Sbjct: 437 LESGSLLISPTHISDAGSYTCLATNSRGVDEASADLVVWARTRITRPPQDQSVIKGTQAS 496

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
             C    DP + +  VW +    +  ES PR     + SL +T++   D G YTCR  + 
Sbjct: 497 MVCGVAHDPRVTIRYVWEKDGATLTMESNPRIRLDKNGSLHITQTWSGDIGTYTCRVLSA 556

Query: 387 LDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV-VSWNPVSPQSLRGHFRGYKVQTWTE 445
                  A L V+    AP +         ++A+ ++W    P         Y ++  +E
Sbjct: 557 GGNDSRSAHLRVRQLPHAPEHPVATLSTAERRAINLTW--AKPFDGNSPLIRYVLEM-SE 613

Query: 446 KDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPG 505
            +   +     V+  E+T+  V   VPA     R+ A N    G  S+    V+    P 
Sbjct: 614 NNAPWTTLLASVDP-EATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPP 672

Query: 506 TVQSLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
           T      I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I+D
Sbjct: 673 TAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRY-CLAGLPVG---YQFKNITD 728

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPN 616
               +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    +   
Sbjct: 729 ADVNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNST 788

Query: 617 NLVISWTA 624
            +  +W A
Sbjct: 789 AIRFTWNA 796



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 174/680 (25%), Positives = 261/680 (38%), Gaps = 67/680 (9%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K Q ++  +   +R  ++  F      P PQ  W +DG  I PS RI+      +L+I  
Sbjct: 102 KHQSISHGEAAVIRAPRIASF------PRPQVTWFRDGRKIPPSSRIAI-TLENTLVILS 154

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFI-------NAAEEET 142
               D G Y  + V++  G+ K S  I L+V  +  P   + P  I         A    
Sbjct: 155 TVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGGPADPIAPTIIVPPKNTSVVAGTSE 214

Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
           VT EC A+  P  ++H  W   G  +S    +  R     R+TI N    D G Y C A 
Sbjct: 215 VTMECVANARPLTKLHIIWKKGGAQVSSGLSDYNR-----RLTIPNPTVGDAGYYQCEAV 269

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+    +  +++VL   P+  + P+   T + + VV + CR  G P P + W  + 
Sbjct: 270 LRSSSVAPAVRGAHLSVL-EPPQFVKEPERHITAEMEKVVDIPCRAKGVPAPSITWYKDA 328

Query: 257 KEL---TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHITD 312
             +      R+     G L+I+ +   D+G + CFARN  G  Q S  L V     +IT 
Sbjct: 329 AVVEVEKLARFRQRGDGGLQISGLVPDDTGMFQCFARNSAGEVQTSTYLAVTSIAPNITR 388

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTK 370
            P D  V  G S    C     P  + +I W +G   +   S   PRF      SL ++ 
Sbjct: 389 GPLDSTVIDGTSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTLLESGSLLISP 446

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQS 430
           +   D+G YTC A       EA A L V          T I      ++V+     S   
Sbjct: 447 THISDAGSYTCLATNSRGVDEASADLVVWA-------RTRITRPPQDQSVIKGTQASMVC 499

Query: 431 LRGHFRGYKVQTWTEKDGEGSIRE----LIVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
              H     ++   EKDG     E    + ++K  S                RVL+  G 
Sbjct: 500 GVAHDPRVTIRYVWEKDGATLTMESNPRIRLDKNGSLHITQTWSGDIGTYTCRVLSAGGN 559

Query: 487 YNGPPSEIISFV--TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
            +      +  +   PE    T+ + E       A  L W KP   N  L+ Y ++    
Sbjct: 560 DSRSAHLRVRQLPHAPEHPVATLSTAE-----RRAINLTWAKPFDGNSPLIRYVLEMSE- 613

Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
                 P    L  + DP  TS  + GL P+  Y+  L      G G  SK    V    
Sbjct: 614 ---NNAPWTTLLASV-DPEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPE 669

Query: 601 --PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDW 658
             P   P NV   G T  +++I W   PE   N     Y I +        +   ++ D 
Sbjct: 670 EPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDA 729

Query: 659 RQSELVLANQPTFQPYEIKV 678
             + L+L +   +  YEI+V
Sbjct: 730 DVNNLLLEDLIIWTNYEIEV 749



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 141/587 (24%), Positives = 224/587 (38%), Gaps = 68/587 (11%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEV 106
           V L C   G P P   W K G  I  S  +    +      SL+I     SD GSYTC  
Sbjct: 401 VVLACETSGAPRPAITWQK-GERILASGSVQLPRFTLLESGSLLISPTHISDAGSYTCLA 459

Query: 107 SN--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--WVHN 162
           +N  GV EA   S DL V A    T  P+  +  +    +  C  +  P   I   W  +
Sbjct: 460 TNSRGVDEA---SADLVVWARTRITRPPQDQSVIKGTQASMVCGVAHDPRVTIRYVWEKD 516

Query: 163 GKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G  ++    NPR ++  N  + I      D G Y C   ++ G   +  ++ V    P  
Sbjct: 517 GATLTMES-NPRIRLDKNGSLHITQTWSGDIGTYTCRVLSAGGNDSRSAHLRV-RQLPHA 574

Query: 222 TEAPKDEY-TVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTIL-----ETGDLKI 274
            E P     T + + + LT  + F    P + ++    E      T+L     E   + +
Sbjct: 575 PEHPVATLSTAERRAINLTWAKPFDGNSPLIRYVLEMSENNAPWTTLLASVDPEATSVMV 634

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS--ATFRCN-- 330
             +  A S ++   A N +    G G  +  + T     PE+      Q+  A+ R N  
Sbjct: 635 KGLVPARSYQFRLCAVNDV----GKGQFS--KDTERVSLPEEPPTAPPQNVIASGRTNQS 688

Query: 331 ----------AVSDPSLKLSIV-WLRGSEPIDFESEPRFVQSNDYS------LTVTKSSE 373
                     +  +  LK  I+ +     P+ ++   + +   D +      L +  + E
Sbjct: 689 IMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQF--KNITDADVNNLLLEDLIIWTNYE 746

Query: 374 LDSGQYTCRAQTELDFIEAQAT-LTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
           ++   Y       L    ++ T  T+Q VP   P N    +  ++     +WN  SPQ +
Sbjct: 747 IEVAAYNSAG---LGVYSSKVTEWTLQGVPTVPPGNVH-AEATNSTAIRFTWNAPSPQFI 802

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR----VLAFNGAY 487
            G  +GYK+  W E + E  +  +        +  V  FV   K F      VL F    
Sbjct: 803 NGINQGYKLIAW-EPEQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYFTSVLCFTTPG 860

Query: 488 NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
           +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY+I ++    T
Sbjct: 861 DGPRSSPQLVRTHEDVPGPVGHLSFSDILDTSLKVSWQEPGEKNGILTGYRISWEEYNRT 920

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
                  R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 921 NT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTAKGQGQVS 962



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 107/274 (39%), Gaps = 24/274 (8%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           +PYF  EP       E   +   C A G    E  W+HN + +++     R+        
Sbjct: 4   SPYFKTEPVRTQVHLEGNRLVLTCMAEGSWPLEFKWLHNNRELTKFSLEYRQV----EYM 59

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RV 242
           I +L ++  G Y C   N +G + +      +A+     E  K +    G+  V+   R+
Sbjct: 60  ITSLDRTHAGFYRCVVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSISHGEAAVIRAPRI 119

Query: 243 FGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSG 300
              P+P+V W  + +++    R  I     L I      D+G Y   A N K G  + S 
Sbjct: 120 ASFPRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQ 179

Query: 301 SLTVKEHT----------HITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEP 349
            +T+               I   P++  V AG S  T  C A + P  KL I+W +G   
Sbjct: 180 PITLAVENVGGPADPIAPTIIVPPKNTSVVAGTSEVTMECVANARPLTKLHIIWKKGGAQ 239

Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +        +   +  LT+   +  D+G Y C A
Sbjct: 240 VS-----SGLSDYNRRLTIPNPTVGDAGYYQCEA 268



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 114/268 (42%), Gaps = 40/268 (14%)

Query: 414  IDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDK 469
            + A+  ++SW P    +SP       R Y +QT     G  ++    V+   S+ T VD+
Sbjct: 1395 VKARSVLLSWEPGSDGLSP------VRYYTIQTRELPGGRWALHSASVSHNASSFT-VDR 1447

Query: 470  FVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKP 527
              P +    RV A N   +   SE   S  T +  P    + L   P  +++  ++W  P
Sbjct: 1448 LKPFTSYKFRVKATNDIGDSEFSEDSESLTTLQAAPDEAPTVLSVTPHTTTSVLIRWQPP 1507

Query: 528  --EQPNGVLMGYKIKYQSV---------------KGTKVGPL--LERLPYISDPTTTSAK 568
              ++ NG+L+G++I+Y+ +                G K   L  L  +  +S P+ T  +
Sbjct: 1508 AEDKVNGILLGFRIRYRELLYEGLRGFTLRDINNPGAKWAELTSLYSMRNLSRPSLTQYE 1567

Query: 569  LAGLEPSTKYRIHLAGYTKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWT 623
            L  L    +Y I ++ Y   G+G  S  + +F    VP   P NV   G+T   L ++W 
Sbjct: 1568 LENLNKHRRYEIRMSVYNAVGEGPLSSPQEVFVGEAVPTAAPRNVAVHGATATQLDVTWE 1627

Query: 624  AMPEIEHNAPHFKYRI-FW--RRHNTGE 648
              P    N     Y+I FW  +R N  E
Sbjct: 1628 PPPLDSQNGDIQGYKIYFWEAQRKNLTE 1655



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V WN +      G   GYKV+ + EKD +   R  +V  
Sbjct: 1180 VPSSGPTNVSALATTSSS-MLVRWNEIPEADRNGLILGYKVR-YKEKDSDSQPRFWLVEG 1237

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF       PS+  I   T + VPG    +    + ++
Sbjct: 1238 NASRSAQITGLGKYVLYEVQVLAFTRIGAASPSQPPILERTLDDVPGPPMGILFPEVRTT 1297

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+      +GL+P + Y
Sbjct: 1298 SVRLIWQPPASPNGIILAYQITHRLNATTANTAAVEVL----APSARQFTASGLKPESVY 1353

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1354 LFRITAQTRKGWGEAAEAL 1372



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N   +    A +  V+W P    S  G  +GYK+  W  +    + R   +  
Sbjct: 1604 VPTAAPRNVA-VHGATATQLDVTWEPPPLDSQNGDIQGYKIYFWEAQRKNLTERVKTLFL 1662

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E+   ++      +     V AFN A +GP S  +   T +  P    S++   L +++
Sbjct: 1663 AENGV-KLKNLTGYTAYMVSVAAFNAAGDGPRSTPVRGQTQQAAPSAPSSVKFSELTTTS 1721

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNG+L GY++ Y+
Sbjct: 1722 VNVSWEDPQFPNGILEGYRLVYE 1744



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 125/308 (40%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 940  LTALTTYTIEVAAMTAKGQGQV----SASTISSGVPPELPGAPTNLGISN---------- 985

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKD-----GEGS---IRELIVNKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +      GEG    +   + N+ ++ + EV    P
Sbjct: 986  IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLLHQLSNEPDARSMEVPDLNP 1045

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 1046 FTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTA---SETSLWLRWMPL 1102

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY    G   G  L  +  + D       +  LE  T+YR+ + 
Sbjct: 1103 PEMEYNGNPESVGYKIKYSRSDGH--GKTLSHV--VPDRVEREYTIEDLEEWTEYRVQVQ 1158

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S  +       VP   P NV    +T +++++ W  +PE + N     Y+
Sbjct: 1159 AFNAIGSGPWSPAVLGRTRESVPSSGPTNVSALATTSSSMLVRWNEIPEADRNGLILGYK 1218

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1219 VRYKEKDS 1226


>gi|327272948|ref|XP_003221246.1| PREDICTED: neuronal cell adhesion molecule-like [Anolis
           carolinensis]
          Length = 1270

 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 203/736 (27%), Positives = 294/736 (39%), Gaps = 108/736 (14%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           LR   + L CI  G P P   W K+G  + P +R    N+ K+L I  +  +D G Y C 
Sbjct: 262 LRGNTLLLECIAEGLPTPTIRWIKEGGEL-PVNRKFFENFNKTLKITDISEADSGKYKCM 320

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A  + I +++ AAPY+  EP  +  +  E  +  C+A+G P+P I W+ NG P
Sbjct: 321 ASNLLGSAH-HVITVTIKAAPYWIREPTNLVFSPGEDGSLICRANGKPKPSISWLANGVP 379

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           I+ AP +P RKV  + I   ++++  +  Y CNA+N  GY+  + +VNVLA  P I    
Sbjct: 380 IAIAPEDPSRKVDGDTIIFTDVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPL 439

Query: 226 KDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFADS 282
              Y V   K  +L C  FG+P PE+ W    K   L G +Y   + G L+I        
Sbjct: 440 NTLYQVIANKPALLDCAFFGSPVPEIEWFKGVKGSILQGNQYIFHKNGTLEIPVAKKNSG 499

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC ARNKLG  Q    L +KE T I  +PE   V+     +F C    D +L  ++ 
Sbjct: 500 GTYTCVARNKLGKVQNDVQLQIKEPTVIIKEPEYKVVQRTGQVSFECIIKHDTTLIPTVT 559

Query: 343 WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPL 402
           WL+  E  +  ++ RF+   + +LT+   ++ D G YTC A T LD + A A LTV  P 
Sbjct: 560 WLK--ENNELPNDERFMVGKN-NLTIMNVTDKDGGAYTCIANTTLDSVSASAVLTVVAPP 616

Query: 403 EAPSNFTLIQVIDAKKAVVSWNPVSP--QSLRGHFRGYKVQTWTE-KDGEGSIRELIVN- 458
            AP              VV   P  P    L  H       TW    D    I + I+  
Sbjct: 617 TAP-------------PVVYDRPDPPFDLELTDHLERSVQLTWIPGNDNNSPITKFIIEY 663

Query: 459 ----------------KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISF 497
                            G  TTT++ K  P      RV+A N      PSE         
Sbjct: 664 EDAMREPGIWNYQTEVNGILTTTQL-KLSPYVNYSFRVIAINDIGRSQPSEASEQYFTKA 722

Query: 498 VTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
             P+  P  VQ + + P       + W  +K  Q NG  + YK+ ++   G       + 
Sbjct: 723 AKPDDNPTDVQGIGSEP---DNLVIMWEPLKQFQSNGPGLQYKVSWRQKDGD------DE 773

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF-----YVPFKNPDNVEG 610
              +     +   ++G    T Y I + G    G   E   +       +P   P N++ 
Sbjct: 774 WTSVIVANVSRYIVSGTPTFTPYEIKVQGLNDLGPAPEPTTVIGHSGEDLPMVAPGNLQV 833

Query: 611 RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT 670
           +        + W  + +         Y+I++                             
Sbjct: 834 QVVNSTLAKVQWDPVAQKYIRGHLQGYKIYY----------------------------- 864

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNK-----GESTTTEVDKFVPASKNFARVLAFNGA 725
                      W  K   G I++ I  K     G  T   V    P S     V   NG 
Sbjct: 865 -----------WKVKSLSGRIKKHIEKKTLTFSGNKTHGMVPGLEPYSSYKLNVRVLNGK 913

Query: 726 YNGPPSEIISFVTPEG 741
             GPPS   +F TPEG
Sbjct: 914 GEGPPSPDEAFKTPEG 929



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 164/603 (27%), Positives = 250/603 (41%), Gaps = 83/603 (13%)

Query: 45   ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY-----GKSLIIKHVEFSDQ 99
             + NK   L C F G+P+P+  W K GV       I QGN        +L I   + +  
Sbjct: 445  VIANKPALLDCAFFGSPVPEIEWFK-GV----KGSILQGNQYIFHKNGTLEIPVAKKNSG 499

Query: 100  GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC--KASGLPEPEI 157
            G+YTC   N +G+ ++  + L +        EPE+        V+FEC  K      P +
Sbjct: 500  GTYTCVARNKLGKVQN-DVQLQIKEPTVIIKEPEYKVVQRTGQVSFECIIKHDTTLIPTV 558

Query: 158  HWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA- 216
             W+   K  ++ P + R  VG N +TI N+   D G Y C A  +L  V     + V+A 
Sbjct: 559  TWL---KENNELPNDERFMVGKNNLTIMNVTDKDGGAYTCIANTTLDSVSASAVLTVVAP 615

Query: 217  --HAPEITEAPKDEYTVD-----GKTVVLT---------------CRVFGAPKPEVNWIH 254
                P + + P   + ++      ++V LT                    A +    W +
Sbjct: 616  PTAPPVVYDRPDPPFDLELTDHLERSVQLTWIPGNDNNSPITKFIIEYEDAMREPGIWNY 675

Query: 255  NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSG------SLTVKEHT 308
             Q E+ G    IL T  LK++      +  +   A N +G +Q S       +   K   
Sbjct: 676  -QTEVNG----ILTTTQLKLSPYV---NYSFRVIAINDIGRSQPSEASEQYFTKAAKPDD 727

Query: 309  HITD------QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
            + TD      +P++  +       F+ N    P L+  + W +     ++ S    + +N
Sbjct: 728  NPTDVQGIGSEPDNLVIMWEPLKQFQSNG---PGLQYKVSWRQKDGDDEWTS---VIVAN 781

Query: 363  DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDA 416
                 V+ +       Y  + Q   D   A    TV       +P+ AP N   +QV+++
Sbjct: 782  VSRYIVSGTPTFTP--YEIKVQGLNDLGPAPEPTTVIGHSGEDLPMVAPGNLQ-VQVVNS 838

Query: 417  KKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK-----GESTTTEVDKFV 471
              A V W+PV+ + +RGH +GYK+  W  K   G I++ I  K     G  T   V    
Sbjct: 839  TLAKVQWDPVAQKYIRGHLQGYKIYYWKVKSLSGRIKKHIEKKTLTFSGNKTHGMVPGLE 898

Query: 472  PASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPN 531
            P S     V   NG   GPPS   +F TPEGVP     L+       +  L+W  P  PN
Sbjct: 899  PYSSYKLNVRVLNGKGEGPPSPDEAFKTPEGVPSAPSFLKITNPNLDSLTLEWGPPSHPN 958

Query: 532  GVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT-TSAKLAGLEPSTKYRIHLAGYTKAGD 590
            GVL+GY +K+Q +  T     L RL  IS P   TS  L+ L  ST+Y+ +L   T  G 
Sbjct: 959  GVLVGYTLKFQPINSTHD---LGRLEEISIPANETSLALSNLNYSTRYKFYLYAQTSVGS 1015

Query: 591  GAE 593
            G +
Sbjct: 1016 GNQ 1018



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 152/614 (24%), Positives = 229/614 (37%), Gaps = 77/614 (12%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P   W  +GVPI     +PS ++     G ++I   V+      Y C  S
Sbjct: 359 LICRANGKPKPSISWLANGVPIAIAPEDPSRKVD----GDTIIFTDVQERSSAVYQCNAS 414

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGK- 164
           N  G   + +  ++VLA P   + P          +    +C   G P PEI W    K 
Sbjct: 415 NEYGYLLANAF-VNVLAEPPRILTPLNTLYQVIANKPALLDCAFFGSPVPEIEWFKGVKG 473

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            I Q       K G   I +   +K+  G Y C A N LG V  DV + +      I E 
Sbjct: 474 SILQGNQYIFHKNGTLEIPVA--KKNSGGTYTCVARNKLGKVQNDVQLQIKEPTVIIKEP 531

Query: 225 PKDEYTVDGKT--VVLTCRVFGAPK--PEVNWIHNQKELTGGRYTILETGDLKITDVAFA 280
              EY V  +T  V   C +       P V W+    EL      ++   +L I +V   
Sbjct: 532 ---EYKVVQRTGQVSFECIIKHDTTLIPTVTWLKENNELPNDERFMVGKNNLTIMNVTDK 588

Query: 281 DSGEYTCFARNKLGTAQGSGSLTV----KEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
           D G YTC A   L +   S  LTV         + D+P+           F         
Sbjct: 589 DGGAYTCIANTTLDSVSASAVLTVVAPPTAPPVVYDRPD---------PPFDLELTDHLE 639

Query: 337 LKLSIVWLRGSEP--------IDFESEPRFVQSNDYS------LTVTKSSELDSGQYTCR 382
             + + W+ G++         I++E   R     +Y       LT T+        Y+ R
Sbjct: 640 RSVQLTWIPGNDNNSPITKFIIEYEDAMREPGIWNYQTEVNGILTTTQLKLSPYVNYSFR 699

Query: 383 AQTELDFIEAQATLTVQV----PLEAPSNFTLIQVIDAK--KAVVSWNPVSPQSLRGHFR 436
                D   +Q +   +       +   N T +Q I ++    V+ W P+      G   
Sbjct: 700 VIAINDIGRSQPSEASEQYFTKAAKPDDNPTDVQGIGSEPDNLVIMWEPLKQFQSNGPGL 759

Query: 437 GYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEI 494
            YKV +W +KDG+     +IV N      +    F P      +V   N     P P+ +
Sbjct: 760 QYKV-SWRQKDGDDEWTSVIVANVSRYIVSGTPTFTPYE---IKVQGLNDLGPAPEPTTV 815

Query: 495 ISFV---TPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT-- 547
           I       P   PG   +L+   + S+   ++W  V  +   G L GYKI Y  VK    
Sbjct: 816 IGHSGEDLPMVAPG---NLQVQVVNSTLAKVQWDPVAQKYIRGHLQGYKIYYWKVKSLSG 872

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDN 607
           ++   +E+         T   + GLEP + Y++++      G+G  S       FK P  
Sbjct: 873 RIKKHIEKKTLTFSGNKTHGMVPGLEPYSSYKLNVRVLNGKGEGPPSP---DEAFKTP-- 927

Query: 608 VEGRGSTPNNLVIS 621
            EG  S P+ L I+
Sbjct: 928 -EGVPSAPSFLKIT 940



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 128/302 (42%), Gaps = 39/302 (12%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGP-------NRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        + R ++ P       N I  EN  K+++ 
Sbjct: 57  ENIVIQCEAKGKPPPSFSWTRNGTHF-DIDKDARVRMKPHSGTLIINIINEENGGKAESY 115

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEIT-EAPKDEYTVDGKTVVLTCR-VFGAPKPE 249
            G Y C A N LG    +  V   + +P  T E    +   +G+ VVL CR   G P P 
Sbjct: 116 EGVYQCTARNELGAAISNNIVIRSSRSPLWTKEKLVPKVVTEGQYVVLPCRPPVGLPPPI 175

Query: 250 VNWIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
           + W+ N  QK     R +    GDL  ++V   D+ E Y C+AR N   T Q    +++K
Sbjct: 176 IFWMDNSFQKLPQNERVSQSLNGDLYFSNVIPEDTREDYICYARFNHTQTIQQKQPISLK 235

Query: 306 -EHTHITDQPEDYEVEAGQSAT-----------FRCNAVSDPSLKLSIVWLR--GSEPID 351
            E   +  +     +  G S +             C A   P+   +I W++  G  P++
Sbjct: 236 VEPARLYQERRPTILTPGGSTSTKTELRGNTLLLECIAEGLPT--PTIRWIKEGGELPVN 293

Query: 352 FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNF 408
                +F ++ + +L +T  SE DSG+Y C A   L       T+T++     +  P+N 
Sbjct: 294 R----KFFENFNKTLKITDISEADSGKYKCMASNLLGSAHHVITVTIKAAPYWIREPTNL 349

Query: 409 TL 410
             
Sbjct: 350 VF 351


>gi|410984299|ref|XP_003998467.1| PREDICTED: protein sidekick-1 [Felis catus]
          Length = 2117

 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 186/627 (29%), Positives = 276/627 (44%), Gaps = 48/627 (7%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQTI--WSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
           + V   + ++ L C+    P+      W ++GV      R++ G   +G+ L I +   +
Sbjct: 209 RSVVAGSSEITLECVANARPVESLSVNWKRNGV------RVTSGLHGFGRRLTISNPTSA 262

Query: 98  DQGSYTCE--VSNGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPE 154
           D G+Y CE  ++    E  +    LS++  PYFT EPE  I    EETV   C+A G+P 
Sbjct: 263 DTGAYVCEATLTGSTFEPATAKAFLSIIEPPYFTAEPERRILVDVEETVDIVCRAMGVPL 322

Query: 155 PEIHWVHNGKPISQAPPNPRRK-VGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P + W  +   I +   NPR K +    + I++LR  D+G + C A+N  G +    Y++
Sbjct: 323 PTLQWYKDAVSIGKLH-NPRYKMLASGGLRIQHLRPEDSGIFQCFASNDGGEIQTYTYLD 381

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V   AP  T+ P D    DG T  L C V GAPKP + W   +  L  G     R+ +LE
Sbjct: 382 VTNVAPAFTQLPVDTTVTDGMTATLRCEVSGAPKPAITWRRGKHILASGSVRIPRFMLLE 441

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L+IT V   D+G YTC+A N  G+   S +LTV   T I + PED  V  G +AT  
Sbjct: 442 SGGLQITPVFIQDAGNYTCYATNTEGSLSASAALTVWNRTSIVNPPEDRVVIKGTTATLH 501

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A  DP + L  VW + +  I      R V   D SL ++++   D G YTC   +E  
Sbjct: 502 CGATHDPRITLRYVWKKDNAIITPSGSSRIVVEKDGSLVISQTWSGDIGDYTCEILSEGG 561

Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRG-----YKVQTW 443
                A L V     +P N  L  +  +    V+ + V P      F G     Y +   
Sbjct: 562 NDSRTARLEVIELPHSPQNL-LASLNSSHSHTVTLSWVRP------FDGNSPVLYYIVEL 614

Query: 444 TEKDGEGSIRELIVNKG-ESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPE 501
           +E +    +   + N G E T   V    PA     RV A N    G  S E    V PE
Sbjct: 615 SENNSPWKVH--LSNVGPEMTGVTVRGLTPARTYQFRVCAVNQVGKGQYSAETSRLVLPE 672

Query: 502 GVPGT-VQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPY 558
             P    +++ A    + +  ++W  P +   NGVL GY ++Y+ + G    P   +   
Sbjct: 673 EPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYR-LAGL---PGEHQQRN 728

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEGRGS 613
           I+ P      +  L   T+Y I +A Y  AG G  S+      L  VP   P NV+    
Sbjct: 729 ITSPEVNYCLVTELIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTDAV 788

Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIF 640
               +   W   P+   N  +  Y++ 
Sbjct: 789 NSTTIQFLWNPPPQQFINGINQGYKLL 815



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 161/382 (42%), Gaps = 32/382 (8%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           ++K V+  +  V  F      P PQ  W ++G  I PS RI+     + +I+       +
Sbjct: 105 QRKTVSQGHAAVLDFLPISSCPRPQVTWFREGHKIVPSSRIAITLENQLVILAATAGDAR 164

Query: 100 GSYTCEVSNGVGEAK-SYSIDLSVLA--------APYFTVEP--EFINAAEEETVTFECK 148
             Y   V+   G++K S  + LSV          AP   + P    + A   E +T EC 
Sbjct: 165 VYYAQAVNERNGDSKTSPLVHLSVAGDAGAPETVAPVIVIPPGNRSVVAGSSE-ITLECV 223

Query: 149 ASGLP--EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT---NSL 203
           A+  P     ++W  NG  ++       R     R+TI N   +DTG Y C AT   ++ 
Sbjct: 224 ANARPVESLSVNWKRNGVRVTSGLHGFGR-----RLTISNPTSADTGAYVCEATLTGSTF 278

Query: 204 GYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KEL 259
                  +++++   P  T  P+    VD  +TV + CR  G P P + W  +     +L
Sbjct: 279 EPATAKAFLSII-EPPYFTAEPERRILVDVEETVDIVCRAMGVPLPTLQWYKDAVSIGKL 337

Query: 260 TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHITDQPEDYE 318
              RY +L +G L+I  +   DSG + CFA N  G  Q    L V       T  P D  
Sbjct: 338 HNPRYKMLASGGLRIQHLRPEDSGIFQCFASNDGGEIQTYTYLDVTNVAPAFTQLPVDTT 397

Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDS 376
           V  G +AT RC     P  K +I W RG   +   S   PRF+      L +T     D+
Sbjct: 398 VTDGMTATLRCEVSGAP--KPAITWRRGKHILASGSVRIPRFMLLESGGLQITPVFIQDA 455

Query: 377 GQYTCRAQTELDFIEAQATLTV 398
           G YTC A      + A A LTV
Sbjct: 456 GNYTCYATNTEGSLSASAALTV 477



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 2/142 (1%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP N   +  + A +  V+W P  P+S  G+ +GYKV  W E D +    ++ V   
Sbjct: 1608 PAMAPQNVQ-VTPLTASQLEVTWEPPPPESQNGNIQGYKVYYW-EADSQNETEKMKVLFL 1665

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
              T  ++      +     + AFN A +GP S+     T +  PGT   L    + S+  
Sbjct: 1666 PETVLKLKNLTGHTPYRVSISAFNAAGDGPRSDPRQGRTHQAAPGTPSFLAFSEITSTTL 1725

Query: 521  YLKWVKPEQPNGVLMGYKIKYQ 542
             + W +P   NGVL GY++ Y+
Sbjct: 1726 NVSWGEPVAANGVLQGYRVVYE 1747



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 80/197 (40%), Gaps = 14/197 (7%)

Query: 389 FIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
           F  A    T+Q VP   P N      +++      WNP   Q + G  +GYK+  W  + 
Sbjct: 763 FSRAVTEYTLQGVPTAPPQNVQ-TDAVNSTTIQFLWNPPPQQFINGINQGYKLLAWPAEI 821

Query: 448 GEG----SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGV 503
            E     +I            T + KF   +  F  VL F    +GPPS      T E  
Sbjct: 822 PEAITVVTIAPDFHGAHHGYITNLKKF---TAYFTSVLCFTTPGDGPPSTPQLVRTHEDK 878

Query: 504 PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
           PG V  L    +  ++  + W +P + NGV+ GY++ ++       G    RL +  + T
Sbjct: 879 PGAVGHLSFTEILDTSLKVSWQEPLEKNGVITGYQVSWEV-----YGRNGSRLTHTLNST 933

Query: 564 TTSAKLAGLEPSTKYRI 580
           T   K+ GL   T Y I
Sbjct: 934 THEYKIQGLSSLTTYTI 950



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 27/203 (13%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V  Q   G   GYK+  +  K+ +   R  +V  
Sbjct: 1182 VPSAAPENVS-AEAVSSTQILLTWASVPEQDQNGLILGYKI-LFRAKELDPEPRSHVVRG 1239

Query: 460  GESTT---TEVDKFVPASKNFARVLAFNGAYNG-PPSEIISFVTPEGVPGTVQSLEAIPL 515
              + +   T + KFV       +VLAF    NG P S ++   T +  PG    L    +
Sbjct: 1240 NHTQSALLTGLRKFVLYE---LQVLAFTRIGNGVPSSPLLLERTKDDAPGPPVRLVFPEV 1296

Query: 516  GSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-------KVGPLLERLPYISDPTTTSAK 568
              ++  + W  PE+PNG+++GY+I Y+    +       +VG  + +         T+ +
Sbjct: 1297 RLTSVRIVWQPPEEPNGIILGYQIAYRLASSSPNTFTTVEVGATVRQF--------TATE 1348

Query: 569  LAGLEPSTKYRIHLAGYTKAGDG 591
            LA   P + Y   L+  T+ G G
Sbjct: 1349 LA---PESAYIFRLSAKTRQGWG 1368



 Score = 43.9 bits (102), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 65/166 (39%), Gaps = 8/166 (4%)

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
           TE    +  ++G  +VLTC   G+   E  W+HN  ELT    T        I  +   D
Sbjct: 15  TEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMHNDSELT----TYSSEYKYIIPSLQRLD 70

Query: 282 SGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           +G Y C  RN++G   Q    + V    +  D  +   V  G +A      +S    +  
Sbjct: 71  AGFYRCVVRNRMGALLQRRSEVQVAYMGNFMDTDQRKTVSQGHAAVLDFLPISS-CPRPQ 129

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + W R    I   S  R   + +  L +  ++  D+  Y  +A  E
Sbjct: 130 VTWFREGHKIVPSS--RIAITLENQLVILAATAGDARVYYAQAVNE 173



 Score = 43.1 bits (100), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 100/254 (39%), Gaps = 27/254 (10%)

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGTV-QSLEAIPLGSS 518
            E+T   V++  P +    R+ A N   +   S E  +  T + VPG    S+   P  +S
Sbjct: 1441 EATACAVERLRPFTSYKLRLKATNDIGDSDFSAETDAVTTLQDVPGEPPSSISVTPHTTS 1500

Query: 519  AFYLKWVKP--EQPNGVLMGYKIKYQSVKG---------TKVGPLLERLPYI-------- 559
            +  ++W  P  E  NG+L GY+I Y+ ++          T   P   R            
Sbjct: 1501 SVLIQWQPPRDESLNGLLQGYRIYYRELESEASAATASKTLKTPSALRAELTAQSSFKTV 1560

Query: 560  -SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYV----PFKNPDNVEGRGS 613
             S  T T+ +L  L+   +Y + L  Y   G+  A +    +V    P   P NV+    
Sbjct: 1561 NSSSTLTTYELTHLKKYRRYEVVLTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTPL 1620

Query: 614  TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
            T + L ++W   P    N     Y++++   ++     +  VL   ++ L L N     P
Sbjct: 1621 TASQLEVTWEPPPPESQNGNIQGYKVYYWEADSQNETEKMKVLFLPETVLKLKNLTGHTP 1680

Query: 674  YEIKVVQTWTEKDG 687
            Y + +       DG
Sbjct: 1681 YRVSISAFNAAGDG 1694



 Score = 42.4 bits (98), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 97/251 (38%), Gaps = 48/251 (19%)

Query: 426  VSPQSLRGHFR-GYKVQTWTEKDGEGSIRELIV--------------------NKGESTT 464
            +SP+S    FR GY        DG+ SI   IV                    N+ ++ T
Sbjct: 988  ISPRSATLQFRPGY--------DGKTSISRWIVEGQVGAIGEEEEWVSLYEEENEPDAQT 1039

Query: 465  TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ--SLEAIPLGSSAFYL 522
             E+    P +    R+   N     P S+    +     P  V   S+       ++  L
Sbjct: 1040 LEIPNLTPYTHYRFRMRQVNIVGASPFSQSSRVIQTLQAPPDVAPTSITVRTASETSLRL 1099

Query: 523  KWVK--PEQPNG--VLMGYKIKY--QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPST 576
            +WV     Q NG    +GY+IKY    ++   +  +      I+D       + GLE  T
Sbjct: 1100 RWVPLPDSQYNGNPESVGYRIKYWRPDLRPQALAQV------INDRLEREFTIEGLEEWT 1153

Query: 577  KYRIHLAGYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHN 631
            +Y + +  +   G G  S+ +       VP   P+NV     +   ++++W ++PE + N
Sbjct: 1154 EYELQMQAFNAIGAGPWSEAVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQN 1213

Query: 632  APHFKYRIFWR 642
                 Y+I +R
Sbjct: 1214 GLILGYKILFR 1224


>gi|47058952|ref|NP_037282.1| neuronal cell adhesion molecule precursor [Rattus norvegicus]
 gi|46369979|gb|AAS89825.1| neuronal cell adhesion molecule long isoform Nc17 [Rattus
           norvegicus]
          Length = 1299

 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 160/522 (30%), Positives = 238/522 (45%), Gaps = 34/522 (6%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           LR   + L CI  G P P   W K+   + P +R    N+ K+L I HV  +D G+Y C 
Sbjct: 278 LRGNVLSLECIAEGLPTPVIYWIKEDGTL-PVNRTFYRNFKKTLQIIHVSEADSGNYQCI 336

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             N +G A  ++I ++V AAPY+ V P  +  +  E  T  C+A+G P+P I W+ NG P
Sbjct: 337 AKNALG-AVHHTISVTVKAAPYWIVAPHNLVLSPGENGTLICRANGNPKPRISWLTNGVP 395

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +  A  +P RK+  + I   N+++S +  Y CNA+N  GY+  + +VNVLA  P I  + 
Sbjct: 396 VEIALDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILTSA 455

Query: 226 KDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFADS 282
              Y V   +  +L C  FG+P P + W    K   L    Y + + G L+I       +
Sbjct: 456 NTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALHEDIYVLHDNGTLEIPVAQKDST 515

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC ARNKLG A+    L +K+ T    QPE   V+ G   +F C    D +L  +I+
Sbjct: 516 GTYTCVARNKLGMAKNEVHLEIKDPTRFIKQPEYAVVQRGSKVSFECKVKHDHTLIPTIL 575

Query: 343 WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPL 402
           WL+ +   +  ++ RF    D+ L V+   + D G YTC A T LD + A A L V  P 
Sbjct: 576 WLKDNG--ELPNDERFSVDKDH-LVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVAPT 632

Query: 403 EAPS----------NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSI 452
             P+          +  L   +D K   ++W P    +       + ++        G  
Sbjct: 633 PTPAPIYDVPNPPFDLELTNQLD-KSVQLTWTPGDDNN--SPITKFIIEYEDAMHEAGLW 689

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPGTV 507
           R      G  TT ++ K  P      RV+A N      PSE     +     P+  P  V
Sbjct: 690 RHQAEVSGTQTTAQL-KLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAV 748

Query: 508 QSLEAIPLGSSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
           + L   P       + W KP    Q NG  + YK+ ++   G
Sbjct: 749 EGLGTEP---DNLVITW-KPLNGFQSNGPGLQYKVSWRQKDG 786



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 136/560 (24%), Positives = 236/560 (42%), Gaps = 50/560 (8%)

Query: 143 VTFECKASGLPEPEIHWVHNGK--PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
           ++ EC A GLP P I+W+      P+++      +K     + I ++ ++D+GNY C A 
Sbjct: 283 LSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKKT----LQIIHVSEADSGNYQCIAK 338

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QKE 258
           N+LG V+  + V V A AP    AP +     G+   L CR  G PKP ++W+ N    E
Sbjct: 339 NALGAVHHTISVTVKA-APYWIVAPHNLVLSPGENGTLICRANGNPKPRISWLTNGVPVE 397

Query: 259 LTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPE 315
           +     +    GD +  ++V  + S  Y C A NK G    +  + V       +T    
Sbjct: 398 IALDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILTSANT 457

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
            Y+V A + A   C     P    +I W +G++      E  +V  ++ +L +  + +  
Sbjct: 458 LYQVIANRPALLDCAFFGSP--MPTIEWFKGTKGSALH-EDIYVLHDNGTLEIPVAQKDS 514

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q    + + VS+       ++
Sbjct: 515 TGTYTCVARNKLGMAKNEVHLEIKDPTRFIKQPE-YAVVQ----RGSKVSFE----CKVK 565

Query: 433 GHFRGYKVQTWTEKDGEGSIRE-LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                     W + +GE    E   V+K     ++V      +   A     +       
Sbjct: 566 HDHTLIPTILWLKDNGELPNDERFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVSA--- 622

Query: 492 SEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
           S ++  V P   P  +  +   P           +  L W   +  N  +  + I+Y+  
Sbjct: 623 SAVLRVVAPTPTPAPIYDVPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYED- 681

Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV 600
                  L      +S  T T+A+L  L P   Y   +      G      A  +YL   
Sbjct: 682 -AMHEAGLWRHQAEVSG-TQTTAQLK-LSPYVNYSFRVMAENSIGRSVPSEASEQYLTKA 738

Query: 601 --PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDW 658
             P +NP  VEG G+ P+NLVI+W  +   + N P  +Y++ WR+ +  + W    V+  
Sbjct: 739 AEPDQNPTAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTS--VVVA 796

Query: 659 RQSELVLANQPTFQPYEIKV 678
             S+ +++  PTF PY IKV
Sbjct: 797 NVSKYIVSGTPTFVPYLIKV 816



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 96/201 (47%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A   W+PV P+S+RGH +GY++  W  +      R  I  K
Sbjct: 839  LPMVAPGNVR-VSVVNSTLAEAHWDPVPPKSVRGHLQGYRIYYWKAQSSSKRNRRHIEKK 897

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 898  ILTFQGSKTHGMLPGLQPYSHYVLNVRVVNGKGEGPASADRGFHTPEGVPSAPSSLKIVN 957

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 958  PTLDSLTLEWDPPSHPNGILTEYILKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 1013

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T  G G++
Sbjct: 1014 NFSTRYKFYFYAQTSVGSGSQ 1034



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 77/317 (24%), Positives = 121/317 (38%), Gaps = 53/317 (16%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   + I  +   K++T  G Y
Sbjct: 57  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGSGTLVINIMSEGKAETYEGVY 116

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +  V   + +P  T+   +   +  G+++VL CR   G P   + W+
Sbjct: 117 QCTARNERGAAVSNNIVVRPSRSPLWTKERLEPIILRSGQSLVLPCRPPIGLPPAIIFWM 176

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-------------------- 290
            N  Q+     R +    GDL  ++V   D+ E Y C+AR                    
Sbjct: 177 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISLKVISV 236

Query: 291 --------NKLGTAQGSGSLTVKEHTHITDQPEDYEVEA----GQSATFRCNAVSDPSLK 338
                     L   +  G+ + KE       PE  E       G   +  C A   P+  
Sbjct: 237 DELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNESHKEELRGNVLSLECIAEGLPT-- 294

Query: 339 LSIVWLR--GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             I W++  G+ P++      F ++   +L +   SE DSG Y C A+  L  +    ++
Sbjct: 295 PVIYWIKEDGTLPVNR----TFYRNFKKTLQIIHVSEADSGNYQCIAKNALGAVHHTISV 350

Query: 397 TVQVP---LEAPSNFTL 410
           TV+     + AP N  L
Sbjct: 351 TVKAAPYWIVAPHNLVL 367


>gi|354471626|ref|XP_003498042.1| PREDICTED: neuronal cell adhesion molecule [Cricetulus griseus]
          Length = 1258

 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 129/364 (35%), Positives = 187/364 (51%), Gaps = 8/364 (2%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           LR   + L CI  G P P   W K+   + P +R    N+ K+L I  V  +D G+Y C 
Sbjct: 279 LRGSVLSLECIAEGLPTPIIYWIKEDGTL-PVNRTFYRNFKKTLQITQVSEADSGNYQCI 337

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             N +G A  ++I ++V AAPY+ V P+ +  +  E  T  C+A+G P+P I W+ NG P
Sbjct: 338 AKNTLG-AVHHTISVTVKAAPYWIVAPQNLVLSPGENGTLICRANGNPKPRIGWLTNGVP 396

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           I  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I  + 
Sbjct: 397 IEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTSA 456

Query: 226 KDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFADS 282
              Y V   +  +L C  FG+P P + W    K   L    Y + + G L+I       +
Sbjct: 457 NTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALHEDIYVLHDNGTLEIPVAQKDST 516

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D +L  +I+
Sbjct: 517 GTYTCVARNKLGMAKNEVHLEIKDPTRIIKQPEYAVVQRGSKVSFECKVKHDHTLIPTIM 576

Query: 343 WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPL 402
           WL+ +   +  ++ RF    D+ L VT   + D G YTC A T LD + A A L V  P 
Sbjct: 577 WLKDNG--ELPNDERFSIDKDH-LVVTDVGDDDGGVYTCAANTTLDRVSASAVLRVVAPT 633

Query: 403 EAPS 406
             P+
Sbjct: 634 PTPA 637



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 143/583 (24%), Positives = 244/583 (41%), Gaps = 66/583 (11%)

Query: 130 VEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGK--PISQAPPNPRRKVGPNRIT 183
           + PE   + +EE     ++ EC A GLP P I+W+      P+++      +K     + 
Sbjct: 267 LTPEGNESVKEELRGSVLSLECIAEGLPTPIIYWIKEDGTLPVNRTFYRNFKKT----LQ 322

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVF 243
           I  + ++D+GNY C A N+LG V+  + V V A AP    AP++     G+   L CR  
Sbjct: 323 ITQVSEADSGNYQCIAKNTLGAVHHTISVTVKA-APYWIVAPQNLVLSPGENGTLICRAN 381

Query: 244 GAPKPEVNWIHNQK--ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSG 300
           G PKP + W+ N    E+     +    GD  I ++V    S  Y C A N+ G    + 
Sbjct: 382 GNPKPRIGWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANA 441

Query: 301 SLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF 358
            + V       +T     Y+V A + A   C     P    +I W +G++      E  +
Sbjct: 442 FVNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSP--MPTIEWFKGTKGSALH-EDIY 498

Query: 359 VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVID 415
           V  ++ +L +  + +  +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q   
Sbjct: 499 VLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQPE-YAVVQ--- 554

Query: 416 AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRE-LIVNKGESTTTEVDK----- 469
            + + VS+       ++          W + +GE    E   ++K     T+V       
Sbjct: 555 -RGSKVSFE----CKVKHDHTLIPTIMWLKDNGELPNDERFSIDKDHLVVTDVGDDDGGV 609

Query: 470 -FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFY 521
               A+    RV A         S ++  V P   P  +  +   P           +  
Sbjct: 610 YTCAANTTLDRVSA---------SAVLRVVAPTPTPAPIYDVPNPPFDLELTNQLDKSVQ 660

Query: 522 LKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIH 581
           L W   +  N  +  + I+Y+     +   +      +S  T T+A+L  L P   Y   
Sbjct: 661 LTWTPGDDNNSPITKFIIEYED--AMREAGIWHHQAEVSG-TQTTAQLK-LSPYVNYSFR 716

Query: 582 LAGYTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHF 635
           +      G      A  +YL     P +NP  VEG G+ P+NLVI+W  +   E N P  
Sbjct: 717 VMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEGLGTEPDNLVITWKPLNGFESNGPGL 776

Query: 636 KYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           +Y++ WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 777 QYKVSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 817



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 140/595 (23%), Positives = 235/595 (39%), Gaps = 69/595 (11%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
            + N+   L C F G+P+P   W K        + I   +   +L I   +    G+YTC 
Sbjct: 463  IANRPALLDCAFFGSPMPTIEWFKGTKGSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCV 522

Query: 106  VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPE--PEIHWVHNG 163
              N +G AK+  + L +        +PE+        V+FECK        P I W+ + 
Sbjct: 523  ARNKLGMAKN-EVHLEIKDPTRIIKQPEYAVVQRGSKVSFECKVKHDHTLIPTIMWLKDN 581

Query: 164  KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE--- 220
                + P + R  +  + + + ++   D G Y C A  +L  V     + V+A  P    
Sbjct: 582  ---GELPNDERFSIDKDHLVVTDVGDDDGGVYTCAANTTLDRVSASAVLRVVAPTPTPAP 638

Query: 221  ITEAPKDEYTVD-----GKTVVLT--------------CRVFGAPKPEVNWIHNQKELTG 261
            I + P   + ++      K+V LT                 +     E    H+Q E++G
Sbjct: 639  IYDVPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYEDAMREAGIWHHQAEVSG 698

Query: 262  GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGS----LTVKEHTH-------- 309
             +     T  LK++      +  +   A N +G +  S +    LT              
Sbjct: 699  TQ----TTAQLKLSPYV---NYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEG 751

Query: 310  ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
            +  +P++  +       F  N    P L+  + W +     ++ S    V +N     V+
Sbjct: 752  LGTEPDNLVITWKPLNGFESNG---PGLQYKVSWRQKDGDDEWTS---VVVANVSKYIVS 805

Query: 370  KSSELDSGQYTCRAQTELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVSWNP 425
             +          +A  ++ F    A +       +P+ AP N   + V+++  A V W+P
Sbjct: 806  GTPTFVPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVH-VNVVNSTLAEVHWDP 864

Query: 426  VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK-----GESTTTEVDKFVPASKNFARV 480
            V  +S+RGH +GY++  W  +      R  I  K     G  T   +    P S     V
Sbjct: 865  VPLKSVRGHLQGYRIYYWKAQGSSKRNRRHIEKKILTFQGSKTHGMLPGLQPYSHYELNV 924

Query: 481  LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
               NG   GP S    F TPEGVP    SL+ +     +  L+W  P  PNG+L  Y +K
Sbjct: 925  RVVNGKGEGPASTDKGFHTPEGVPSAPSSLKIVNPTLDSLTLEWDPPSHPNGILTEYTLK 984

Query: 541  YQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
            YQ +  T ++GPL++ ++P       T   L  L  ST+Y+ +    T  G G++
Sbjct: 985  YQPINSTHELGPLVDLKIPA----NKTRWTLKNLNFSTRYKFYFYAQTSVGSGSQ 1035



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 140/609 (22%), Positives = 222/609 (36%), Gaps = 69/609 (11%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 376 LICRANGNPKPRIGWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 431

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T                +C   G P P I W   G  
Sbjct: 432 NEYGYLLANAF-VNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPMPTIEWF-KGTK 489

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
            S    +         + I   +K  TG Y C A N LG    +V++ +      I + P
Sbjct: 490 GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQP 548

Query: 226 KDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRYTILETGDLKITDVAFADSG 283
           +      G  V   C+V       P + W+ +  EL       ++   L +TDV   D G
Sbjct: 549 EYAVVQRGSKVSFECKVKHDHTLIPTIMWLKDNGELPNDERFSIDKDHLVVTDVGDDDGG 608

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVW 343
            YTC A   L     S  L V     +   P    +    +  F     +     + + W
Sbjct: 609 VYTCAANTTLDRVSASAVLRV-----VAPTPTPAPIYDVPNPPFDLELTNQLDKSVQLTW 663

Query: 344 LRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQATL 396
             G +   PI     E E    ++  +      S    + Q          F + A+ ++
Sbjct: 664 TPGDDNNSPITKFIIEYEDAMREAGIWHHQAEVSGTQTTAQLKLSPYVNYSFRVMAENSI 723

Query: 397 TVQVPLEAPSNF-----------TLIQVI--DAKKAVVSWNPVSPQSLRGHFRGYKVQTW 443
              VP EA   +           T ++ +  +    V++W P++     G    YKV +W
Sbjct: 724 GRSVPSEASEQYLTKAAEPDQNPTAVEGLGTEPDNLVITWKPLNGFESNGPGLQYKV-SW 782

Query: 444 TEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFN--------GAYNGPPSEI 494
            +KDG+     ++V N  +   +    FVP      +V A N         A  G   E 
Sbjct: 783 RQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAAVMGHSGED 839

Query: 495 ISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT--KVGPL 552
           +  V P  V   V +     +      LK V+     G L GY+I Y   +G+  +    
Sbjct: 840 LPMVAPGNVHVNVVNSTLAEVHWDPVPLKSVR-----GHLQGYRIYYWKAQGSSKRNRRH 894

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGR 611
           +E+       + T   L GL+P + Y +++      G+G A +   F+ P       EG 
Sbjct: 895 IEKKILTFQGSKTHGMLPGLQPYSHYELNVRVVNGKGEGPASTDKGFHTP-------EGV 947

Query: 612 GSTPNNLVI 620
            S P++L I
Sbjct: 948 PSAPSSLKI 956



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 80/344 (23%), Positives = 133/344 (38%), Gaps = 57/344 (16%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNGKPIS-QAP 170
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 29  ISALDVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKD 88

Query: 171 PNPRRKVGPNRITI----ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
           P    K G   + I    E   ++  G Y C A N  G    +  V   + +P  T+   
Sbjct: 89  PLVTMKPGSGTLIINIMGEGRAETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKERL 148

Query: 227 DEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKITDVAFADS 282
           +  T+ +G+++VL CR   G P   + W+ N  Q+     R +    GDL  ++V   D+
Sbjct: 149 EPITLRNGQSLVLPCRPPVGLPPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDT 208

Query: 283 GE-YTCFAR-NKLGTAQGSGSLTVK-----------------------------EHTHIT 311
            E Y C+AR N   T Q    +++K                               T +T
Sbjct: 209 REDYICYARFNHTQTIQQKQPISLKVISVDELNDTIAANLSDTEFYGAKPSKERPPTFLT 268

Query: 312 DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLR--GSEPIDFESEPRFVQSNDYSLTVT 369
            +  +   E  + +      +++      I W++  G+ P++      F ++   +L +T
Sbjct: 269 PEGNESVKEELRGSVLSLECIAEGLPTPIIYWIKEDGTLPVNR----TFYRNFKKTLQIT 324

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
           + SE DSG Y C A+  L  +    ++TV+     + AP N  L
Sbjct: 325 QVSEADSGNYQCIAKNTLGAVHHTISVTVKAAPYWIVAPQNLVL 368


>gi|348558216|ref|XP_003464914.1| PREDICTED: protein sidekick-2 [Cavia porcellus]
          Length = 2159

 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 181/608 (29%), Positives = 259/608 (42%), Gaps = 38/608 (6%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVE 95
           +   V     +V + C+    PL +   IW KDGV      ++S G  +Y + L I    
Sbjct: 209 KNTSVVAGTSEVIMECVANARPLIKLHIIWKKDGV------QVSSGLSDYNRRLTIPSPT 262

Query: 96  FSDQGSYTCEV---SNGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASG 151
            SD G Y CE    S+ V         LSVL  P F  EPE  I A  E+ V   C+A G
Sbjct: 263 VSDAGYYECEAVLRSSSVAPVVR-GAHLSVLEPPQFVKEPERHITAEMEKVVDIPCRAKG 321

Query: 152 LPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVY 211
           +P P I W  +   +        R+ G   + I  L   DTG + C A N+ G V    Y
Sbjct: 322 VPPPSITWYKDAAVVEVEKLARFRQRGDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTY 381

Query: 212 VNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTI 266
           + V + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T+
Sbjct: 382 LAVTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTL 441

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
           LE+G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+
Sbjct: 442 LESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITRPPQDQSVIKGTQAS 501

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
             C    DP + +  VW +    +  ES PR     + SL +T++   D G YTCR  + 
Sbjct: 502 MVCGVTHDPRVTIRYVWEKDGATLATESNPRIRLDKNGSLHITQTWSGDIGTYTCRVLSA 561

Query: 387 LDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV-VSWNPVSPQSLRGHFRGYKVQTWTE 445
                  A L V+    AP +         ++A+ ++W    P         Y ++  +E
Sbjct: 562 GGNDSRSAHLRVRQLPHAPEHPVATLSTTERRAINLTW--AKPFDGNSPLIRYVLEM-SE 618

Query: 446 KDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPG 505
            +   +     V+  E+T+  V   VPA     R+ A N    G  S+    V+    P 
Sbjct: 619 NNAPWTTLLASVDP-EATSVMVKGLVPARSYQFRLCAVNDVGRGQFSKDTERVSLPEEPP 677

Query: 506 TVQSLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
           T      I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I+D
Sbjct: 678 TAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRY-CLAGLPVG---YQFKNITD 733

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPN 616
               +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    +   
Sbjct: 734 ADVNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNST 793

Query: 617 NLVISWTA 624
            +  +W A
Sbjct: 794 TIRFTWNA 801



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 177/692 (25%), Positives = 269/692 (38%), Gaps = 91/692 (13%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K Q V+  +   +R  ++  F      P PQ  W +DG  I PS RI+      +L+I  
Sbjct: 107 KYQSVSHGEAAVIRAPRIASF------PRPQVTWFRDGRKIPPSSRIAI-TLENTLVILS 159

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFINAAEEETVT----- 144
               D G Y  + V++  G+ K S  I L+V  +  P   + P  I   +  +V      
Sbjct: 160 TVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSE 219

Query: 145 --FECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
              EC A+  P  ++H  W  +G  +S    +  R     R+TI +   SD G Y C A 
Sbjct: 220 VIMECVANARPLIKLHIIWKKDGVQVSSGLSDYNR-----RLTIPSPTVSDAGYYECEAV 274

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+  V +  +++VL   P+  + P+   T + + VV + CR  G P P + W  + 
Sbjct: 275 LRSSSVAPVVRGAHLSVL-EPPQFVKEPERHITAEMEKVVDIPCRAKGVPPPSITWYKDA 333

Query: 257 KEL---TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITD 312
             +      R+     G L+I+ +   D+G + CFARN  G  Q S  L V     +IT 
Sbjct: 334 AVVEVEKLARFRQRGDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAVTSIAPNITR 393

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTK 370
            P D  V  G S    C     P  + +I W +G   +   S   PRF      SL ++ 
Sbjct: 394 GPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTLLESGSLLISP 451

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQS 430
           +   D+G YTC A       EA A L                V+ A+  +    P   QS
Sbjct: 452 THISDAGTYTCLATNSRGVDEASADL----------------VVWARTRIT--RPPQDQS 493

Query: 431 LRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN-------------- 476
           +    +   V   T  D   +IR +    G +  TE +  +   KN              
Sbjct: 494 VIKGTQASMVCGVTH-DPRVTIRYVWEKDGATLATESNPRIRLDKNGSLHITQTWSGDIG 552

Query: 477 --FARVLAFNGAYNGPPSEIISFV--TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
               RVL+  G  +      +  +   PE    T+ + E       A  L W KP   N 
Sbjct: 553 TYTCRVLSAGGNDSRSAHLRVRQLPHAPEHPVATLSTTE-----RRAINLTWAKPFDGNS 607

Query: 533 VLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 592
            L+ Y ++  S        LL  +    DP  TS  + GL P+  Y+  L      G G 
Sbjct: 608 PLIRYVLE-MSENNAPWTTLLASV----DPEATSVMVKGLVPARSYQFRLCAVNDVGRGQ 662

Query: 593 ESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
            SK    V      P   P NV   G T  +++I W   PE   N     Y I +     
Sbjct: 663 FSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGL 722

Query: 647 GEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
              +   ++ D   + L+L +   +  YEI+V
Sbjct: 723 PVGYQFKNITDADVNNLLLEDLIIWTNYEIEV 754



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 11/177 (6%)

Query: 422 SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR-- 479
           +WN  SPQ + G  +GYK+  W E + E  +  +        +  V  FV   K F    
Sbjct: 798 TWNAPSPQFINGINQGYKLIAW-EPEQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYF 855

Query: 480 --VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
             VL F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY
Sbjct: 856 TSVLCFTTPGDGPRSSPQLVRTHEDVPGPVGHLSFSDILDTSLKVSWQEPGEKNGILTGY 915

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           +I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 916 RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 967



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 105/274 (38%), Gaps = 27/274 (9%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           +PYF  EP       E   +   C A G    E  W+HN + +++            R  
Sbjct: 12  SPYFKTEPVRTQVHLEGNRLVLTCMAEGSWPLEFKWLHNNRELTKFSLE-------YRYM 64

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RV 242
           I +L ++  G Y C   N +G + +      +A+     E  K +    G+  V+   R+
Sbjct: 65  ITSLDRTHAGFYRCVVRNRMGALLQRQTEVQVAYMGNFEEGEKYQSVSHGEAAVIRAPRI 124

Query: 243 FGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSG 300
              P+P+V W  + +++    R  I     L I      D+G Y   A N K G  + S 
Sbjct: 125 ASFPRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQ 184

Query: 301 SLTVK----------EHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEP 349
            +T+               I   P++  V AG S     C A + P +KL I+W +    
Sbjct: 185 PITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVIMECVANARPLIKLHIIWKK---- 240

Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            D       +   +  LT+   +  D+G Y C A
Sbjct: 241 -DGVQVSSGLSDYNRRLTIPSPTVSDAGYYECEA 273



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 113/271 (41%), Gaps = 46/271 (16%)

Query: 414  IDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDK 469
            + A+  ++SW P    +SP       R Y +QT     G  ++    VN   S+ T VD+
Sbjct: 1400 VKARSVLLSWEPGSDGLSP------VRYYTIQTRELPSGRWALHSASVNHNTSSFT-VDR 1452

Query: 470  FVPASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKW 524
              P +    RV A N   +   SE    +T     P+  P     L   P  +++  ++W
Sbjct: 1453 LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTV---LSVTPHTTTSVLIRW 1509

Query: 525  VKP--EQPNGVLMGYKIKYQSV---------------KGTKVGPL--LERLPYISDPTTT 565
              P  ++ NG+L+G++I+Y+ +                G K   L  L  +  +S P+ T
Sbjct: 1510 QPPAEDKVNGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELTSLYSMRNLSRPSLT 1569

Query: 566  SAKLAGLEPSTKYRIHLAGYTKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVI 620
              +L  L     Y I ++ Y   G+G  S  + +F    VP   P NV   G+T   L +
Sbjct: 1570 QYELDNLNKHRWYEIRMSVYNAVGEGPLSPPQEVFVGEAVPTAAPRNVVVHGTTATQLDV 1629

Query: 621  SWTAMPEIEHNAPHFKYRI-FW--RRHNTGE 648
            +W   P    N     Y+I FW  +R N  E
Sbjct: 1630 TWEPPPLDSQNGNIQGYKIYFWEAQRQNLTE 1660



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N  ++    A +  V+W P    S  G+ +GYK+  W  +    + R   +  
Sbjct: 1609 VPTAAPRN-VVVHGTTATQLDVTWEPPPLDSQNGNIQGYKIYFWEAQRQNLTERVKTLFL 1667

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E+   ++      +     V AFN A +GP S  +   T +  P    S++   L +++
Sbjct: 1668 AENGV-KLKNLTGYTAYMVTVAAFNAAGDGPRSTPVQGRTQQAAPSAPSSVKFSELTTTS 1726

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNG+L GY++ Y+
Sbjct: 1727 VNVSWEAPQFPNGILEGYRLVYE 1749



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 83/199 (41%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ V      G   GYKV+ + EKD +      +V  
Sbjct: 1185 VPSSGPTNVSALATTSSS-MLVRWSEVPEADRNGLVLGYKVR-YKEKDSDSQPHFWLVEG 1242

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1243 NASRSVQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 1302

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++          +E L     P+       GL+P + Y
Sbjct: 1303 SVRLIWQPPAAPNGIILAYQITHRLNATAANTAAVEVL----APSARQYTATGLKPESVY 1358

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1359 LFRITAQTRKGWGEAAEAL 1377



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 127/308 (41%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 945  LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGAPTNLGISN---------- 990

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +   G + E    L++    N+ ++ + EV    P
Sbjct: 991  IGPRSVTLQFRPGYDGKTSISRWLVEAQVGMVGEGEEWLLIHQLSNEPDARSMEVPDLNP 1050

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 1051 FTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTA---SETSLWLRWMPL 1107

Query: 527  PEQP-NGV--LMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE   NG    +GYKIKY    G   G  L  +  + D       +  LE   +YR+ + 
Sbjct: 1108 PEMEYNGSPESVGYKIKYSRSDGH--GKTLSHV--VLDRVEREYTIEDLEEWMEYRVQVQ 1163

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S  +       VP   P NV    +T +++++ W+ +PE + N     Y+
Sbjct: 1164 AFNAIGSGPWSPVVLGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYK 1223

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1224 VRYKEKDS 1231


>gi|126340549|ref|XP_001362992.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Monodelphis
           domestica]
          Length = 1183

 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 164/521 (31%), Positives = 243/521 (46%), Gaps = 42/521 (8%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           LR   + L CI  G P P   W+K DG +PIN   R    N+ K+L I HV  +D G Y 
Sbjct: 277 LRENVLSLECIAEGLPTPSINWTKEDGELPIN---RTFYKNFKKTLNIIHVSEADSGKYK 333

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G  + ++I ++V AAPY+   P  +  +  E  T  C+A+G P+P I W+ NG
Sbjct: 334 CTARNSLGFVE-HTISVTVKAAPYWITAPRNLVLSPGEDGTLICRANGNPKPNISWLING 392

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-T 222
            PI  AP +P RK+  + I   ++++S +  Y CNA+N  GY+  + +VNVLA  P I T
Sbjct: 393 VPIEMAPDDPSRKIDGDTILFSDVQESSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT 452

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           E       +  +  +L C  FG+P P + W    K   L    Y   + G L+I  VA  
Sbjct: 453 EVDLRYQVITDRPAMLDCAFFGSPIPTIEWFKGTKGSVLQENTYVFHDNGTLEIP-VAQK 511

Query: 281 DSGE-YTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           DS + YTC  RNKLG A+    L VK+ T I  QPE   V+ G   +F C    DP+L  
Sbjct: 512 DSADTYTCVVRNKLGMAKNDVHLEVKDPTRIIKQPEYKIVQRGGRVSFECTVKHDPTLIA 571

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           ++ WL+     +  ++ RF   ND+ L +   S+ D   YTC A T LD + A A L V 
Sbjct: 572 TLTWLKDYG--ELPNDGRFSIDNDH-LVIMNISDEDDATYTCVANTSLDIVSASAMLRVV 628

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHFRGYKVQTWTEKDGEGSI 452
                P +  L   ++ +   +SW       +P++   +      ++   W  +     I
Sbjct: 629 DRPNPPFDLELTSFLE-RSVQLSWIPGEENNSPITEFIIEYEDAFHEPGIWHHQTDVPGI 687

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF-----VTPEGVPGTV 507
           +         TT E+ K  P  K   RV+A N      PSE   +       PE  P  V
Sbjct: 688 Q---------TTAEL-KLSPYVKYSFRVIAVNSIGRSLPSEASEYYMTKAAEPEENPTAV 737

Query: 508 QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKG 546
           + + + P       + W  +K    NG  + YK+ ++   G
Sbjct: 738 EGIGSEP---DNLVITWQPLKGFDSNGPGLQYKVSWRQKDG 775



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 99/200 (49%), Gaps = 12/200 (6%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ APSN   + V+++  A V W PV P+S+RGH +GY++  W  K+     R  +  K
Sbjct: 828  LPMVAPSNVR-VNVVNSTLAEVHWEPVPPKSIRGHLKGYRIYYWKVKNSSKRNRRHVEKK 886

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVPG    L+ + 
Sbjct: 887  ILTFNGNKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASVDQVFNTPEGVPGAPLFLKIVN 946

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +K+Q +  T ++GPL++ ++P       TS  L  L
Sbjct: 947  PTLDSLTLEWDPPSHPNGILTAYTLKFQPINSTHELGPLVDLKIP----ANMTSLILRNL 1002

Query: 573  EPSTKYRIHLAGYTKAGDGA 592
              ST+Y+ +    T AG G+
Sbjct: 1003 SYSTRYKFYFYAQTAAGTGS 1022



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 143/589 (24%), Positives = 224/589 (38%), Gaps = 85/589 (14%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P   W  +GVPI     +PS +I     G +++   V+ S    Y C  S
Sbjct: 374 LICRANGNPKPNISWLINGVPIEMAPDDPSRKID----GDTILFSDVQESSSAVYQCNAS 429

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAE-------EETVTFECKASGLPEPEIHWV 160
           N  G   + +  ++VLA P     P  +   +       +     +C   G P P I W 
Sbjct: 430 NEYGYLLANAF-VNVLAEP-----PRILTEVDLRYQVITDRPAMLDCAFFGSPIPTIEWF 483

Query: 161 HNGK-PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
              K  + Q         G   I +     +DT  Y C   N LG    DV++ V     
Sbjct: 484 KGTKGSVLQENTYVFHDNGTLEIPVAQKDSADT--YTCVVRNKLGMAKNDVHLEV-KDPT 540

Query: 220 EITEAPKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKEL-TGGRYTILETGDLKITD 276
            I + P+ +    G  V   C V   P     + W+ +  EL   GR++I +   L I +
Sbjct: 541 RIIKQPEYKIVQRGGRVSFECTVKHDPTLIATLTWLKDYGELPNDGRFSI-DNDHLVIMN 599

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
           ++  D   YTC A   L     S  L V +     + P D E+           +  + S
Sbjct: 600 ISDEDDATYTCVANTSLDIVSASAMLRVVDRP---NPPFDLEL----------TSFLERS 646

Query: 337 LKLSIVWLRGSE---PI--------DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
           ++LS  W+ G E   PI        D   EP           +  ++EL    Y      
Sbjct: 647 VQLS--WIPGEENNSPITEFIIEYEDAFHEPGIWHHQTDVPGIQTTAELKLSPYV----- 699

Query: 386 ELDF-IEAQATLTVQVPLEAPS-----------NFTLIQVIDAK--KAVVSWNPVSPQSL 431
           +  F + A  ++   +P EA             N T ++ I ++    V++W P+     
Sbjct: 700 KYSFRVIAVNSIGRSLPSEASEYYMTKAAEPEENPTAVEGIGSEPDNLVITWQPLKGFDS 759

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGP 490
            G    YKV +W +KDG+     ++V N  +   +    FVP      +V A N     P
Sbjct: 760 NGPGLQYKV-SWRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LVKVQALNNVGFAP 815

Query: 491 PSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT 547
              II   + E +P    S +    + S+   + W  V P+   G L GY+I Y  VK +
Sbjct: 816 EPGIIIGHSGEDLPMVAPSNVRVNVVNSTLAEVHWEPVPPKSIRGHLKGYRIYYWKVKNS 875

Query: 548 --KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
             +    +E+     +   T   L GLEP + Y +++      G+G  S
Sbjct: 876 SKRNRRHVEKKILTFNGNKTHGMLPGLEPFSHYTLNVRVVNGKGEGPAS 924



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 174/439 (39%), Gaps = 61/439 (13%)

Query: 30  RHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDG----VPINPSDRI--SQG 83
           R +PK  Y+   +E       +E+ C   G P P   W+++G    +  +P  ++  + G
Sbjct: 44  RQSPKD-YIIDPRE------NIEIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVKMLPNSG 96

Query: 84  NYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEE 141
               S+ I+    + +G Y C   N  G A S +I +    +P +T E   +      + 
Sbjct: 97  TLVISITIEGKAETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEQITILKGQS 156

Query: 142 TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTG-NYGCNA 199
            V       GLP P I W+ N     + P + R   G N  +   N+   DT  +Y C A
Sbjct: 157 LVLPCRPPLGLPPPIIFWMDNS--FQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYA 214

Query: 200 T-NSLGYVYKDVYVNVLAH--------------------APEITEAPKDEYTVDGKT--- 235
             N    + +   ++V  H                    A    E P    T +G+T   
Sbjct: 215 RFNHTQTIQQKQPISVKVHSMDELNDTITANLSDSEFYGAKSYIERPPKLLTPEGRTSHK 274

Query: 236 -------VVLTCRVFGAPKPEVNWIHNQKELTGGR--YTILETGDLKITDVAFADSGEYT 286
                  + L C   G P P +NW     EL   R  Y   +   L I  V+ ADSG+Y 
Sbjct: 275 EELRENVLSLECIAEGLPTPSINWTKEDGELPINRTFYKNFKK-TLNIIHVSEADSGKYK 333

Query: 287 CFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           C ARN LG  + + S+TVK   +    P +  +  G+  T  C A  +P  K +I WL  
Sbjct: 334 CTARNSLGFVEHTISVTVKAAPYWITAPRNLVLSPGEDGTLICRANGNP--KPNISWLIN 391

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPS 406
             PI+   +    + +  ++  +   E  S  Y C A  E  ++ A A   V V  E P 
Sbjct: 392 GVPIEMAPDDPSRKIDGDTILFSDVQESSSAVYQCNASNEYGYLLANA--FVNVLAEPPR 449

Query: 407 NFTLI----QVIDAKKAVV 421
             T +    QVI  + A++
Sbjct: 450 ILTEVDLRYQVITDRPAML 468



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 139/345 (40%), Gaps = 59/345 (17%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  MSALEVPLDLVQPPTITRQSPKDYIIDPRENIEIQCEAKGKPPPSFSWTRNGTHF-DIDK 85

Query: 172 NPRRKVGPN------RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +P  K+ PN       ITIE   ++  G Y C A N  G    +  V   + +P  T+  
Sbjct: 86  DPLVKMLPNSGTLVISITIEGKAETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEK 145

Query: 226 KDEYTV-DGKTVVLTCRVFGAPKPE-VNWIHN--QKELTGGRYTILETGDLKITDVAFAD 281
            ++ T+  G+++VL CR      P  + W+ N  Q+     R +    GDL  ++V   D
Sbjct: 146 LEQITILKGQSLVLPCRPPLGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPED 205

Query: 282 SGE-YTCFAR-NKLGTAQGSGSLTVKEHTH------ITDQPEDYEVEAGQSATFRCNAVS 333
           + E Y C+AR N   T Q    ++VK H+       IT    D E    +S   R   + 
Sbjct: 206 TREDYICYARFNHTQTIQQKQPISVKVHSMDELNDTITANLSDSEFYGAKSYIERPPKLL 265

Query: 334 DP---------------SLKL--------SIVWLR--GSEPIDFESEPRFVQSNDYSLTV 368
            P               SL+         SI W +  G  PI+      F ++   +L +
Sbjct: 266 TPEGRTSHKEELRENVLSLECIAEGLPTPSINWTKEDGELPINR----TFYKNFKKTLNI 321

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
              SE DSG+Y C A+  L F+E   ++TV+     + AP N  L
Sbjct: 322 IHVSEADSGKYKCTARNSLGFVEHTISVTVKAAPYWITAPRNLVL 366



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 14/176 (7%)

Query: 510 LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ-SVKGTKVGPLLERLPYISDPTTTSAK 568
           LE       +  L W+  E+ N  +  + I+Y+ +     +      +P I     T+A+
Sbjct: 637 LELTSFLERSVQLSWIPGEENNSPITEFIIEYEDAFHEPGIWHHQTDVPGIQ----TTAE 692

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV------PFKNPDNVEGRGSTPNNLVISW 622
           L  L P  KY   +      G    S+   Y       P +NP  VEG GS P+NLVI+W
Sbjct: 693 LK-LSPYVKYSFRVIAVNSIGRSLPSEASEYYMTKAAEPEENPTAVEGIGSEPDNLVITW 751

Query: 623 TAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
             +   + N P  +Y++ WR+ +  + W    V+    S+ +++  PTF PY +KV
Sbjct: 752 QPLKGFDSNGPGLQYKVSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLVKV 805


>gi|348568085|ref|XP_003469829.1| PREDICTED: neuronal cell adhesion molecule isoform 1 [Cavia
           porcellus]
          Length = 1183

 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 135/390 (34%), Positives = 197/390 (50%), Gaps = 11/390 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           +RK+E  LR   + L CI  G P P   W K+   + P++R    N+ K+L I  V  +D
Sbjct: 272 SRKEE--LRGNVLSLECIAEGLPTPLIYWIKEDGTL-PANRTFYRNFQKTLQIIQVSEAD 328

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G+Y C   N +G  + ++I ++V AAPY+ + P  +  +  E  T  C+A+G P+P I 
Sbjct: 329 SGNYQCIAKNTLGIIR-HTISVTVKAAPYWIMAPRNLVLSPGEDGTLICRANGNPKPRIS 387

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG P   AP +P R++  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  
Sbjct: 388 WLTNGVPTEIAPDDPSRRIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEL 447

Query: 219 PEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKIT 275
           P I       Y V   +   L C  FG+P P + W    K   L    Y I E G L+I 
Sbjct: 448 PRILTPANTLYQVIANRPAFLDCAFFGSPLPTIEWFKGAKGSALHEDIYVIHENGTLEIP 507

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
                +SG YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D 
Sbjct: 508 VAQKDNSGTYTCVARNKLGVAKNEVHLEIKDPTRILKQPEYAVVQRGGRVSFECKVKHDH 567

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
           +L  ++ WL+ +   +  ++ RF    D+ L VT   + D G YTC A T LD + A A 
Sbjct: 568 TLIATVTWLKDNG--ELPNDERFTVDKDH-LVVTDVRDSDGGIYTCVANTTLDEVSASAV 624

Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           L+V      P +  L   +D K   +SW P
Sbjct: 625 LSVVDVPSPPFDLELTDQLD-KSVQLSWTP 653



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 148/566 (26%), Positives = 236/566 (41%), Gaps = 53/566 (9%)

Query: 136 NAAEEE-----TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENL 187
           NA+ +E      ++ EC A GLP P I+W+   K     P N  R    N    + I  +
Sbjct: 270 NASRKEELRGNVLSLECIAEGLPTPLIYWI---KEDGTLPAN--RTFYRNFQKTLQIIQV 324

Query: 188 RKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPK 247
            ++D+GNY C A N+LG +   + V V A AP    AP++     G+   L CR  G PK
Sbjct: 325 SEADSGNYQCIAKNTLGIIRHTISVTVKA-APYWIMAPRNLVLSPGEDGTLICRANGNPK 383

Query: 248 PEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTV 304
           P ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    +  + V
Sbjct: 384 PRISWLTNGVPTEIAPDDPSRRIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNV 443

Query: 305 KEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
                    P +  Y+V A + A   C     P    +I W +G++      +   +  N
Sbjct: 444 LAELPRILTPANTLYQVIANRPAFLDCAFFGSP--LPTIEWFKGAKGSALHEDIYVIHEN 501

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKA 419
             +L +  + + +SG YTC A+ +L   + +  L ++ P   L+ P  + ++Q    +  
Sbjct: 502 G-TLEIPVAQKDNSGTYTCVARNKLGVAKNEVHLEIKDPTRILKQPE-YAVVQ----RGG 555

Query: 420 VVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRE-LIVNKGESTTTEVDKFVPASKNFA 478
            VS+       ++         TW + +GE    E   V+K     T+V     +     
Sbjct: 556 RVSFE----CKVKHDHTLIATVTWLKDNGELPNDERFTVDKDHLVVTDVRD---SDGGIY 608

Query: 479 RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
             +A         S ++S V    VP     LE       +  L W   +  N  +  + 
Sbjct: 609 TCVANTTLDEVSASAVLSVV---DVPSPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFI 665

Query: 539 IKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AES 594
           I+Y+         L      +S  T T+A+L  L P   Y   +      G      A  
Sbjct: 666 IEYED--AMHEAGLWHHQAEVSG-TQTTAQLK-LSPYVNYSFRVMAENSIGRSLPSEASE 721

Query: 595 KYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
           +Y      P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W  
Sbjct: 722 QYQTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS 781

Query: 653 DDVLDWRQSELVLANQPTFQPYEIKV 678
             V+    S+ +++  PTF PY IKV
Sbjct: 782 --VVVANVSKYIVSGTPTFVPYLIKV 805



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 134/588 (22%), Positives = 240/588 (40%), Gaps = 65/588 (11%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
            + N+   L C F G+PLP   W K        + I   +   +L I   +  + G+YTC 
Sbjct: 461  IANRPAFLDCAFFGSPLPTIEWFKGAKGSALHEDIYVIHENGTLEIPVAQKDNSGTYTCV 520

Query: 106  VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPE--PEIHWVHNG 163
              N +G AK+  + L +        +PE+        V+FECK          + W+ + 
Sbjct: 521  ARNKLGVAKN-EVHLEIKDPTRILKQPEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDN 579

Query: 164  KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--------- 214
                + P + R  V  + + + ++R SD G Y C A  +L  V     ++V         
Sbjct: 580  ---GELPNDERFTVDKDHLVVTDVRDSDGGIYTCVANTTLDEVSASAVLSVVDVPSPPFD 636

Query: 215  ------LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE 268
                  L  + +++  P D+        ++    +     E    H+Q E++G +     
Sbjct: 637  LELTDQLDKSVQLSWTPGDDNNSPITKFIIE---YEDAMHEAGLWHHQAEVSGTQ----T 689

Query: 269  TGDLKITDVAFADSGEYTCFARNKLGTA---------QGSGSLTVKEHTHIT---DQPED 316
            T  LK++      +  +   A N +G +         Q   +   K  T +     +P++
Sbjct: 690  TAQLKLSPYV---NYSFRVMAENSIGRSLPSEASEQYQTKAAEPDKNPTAVEGLGSEPDN 746

Query: 317  YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
              +       F  N    P L+  + W +     ++ S    V +N     V+ +     
Sbjct: 747  LVITWKPLNGFESNG---PGLQYKVSWRQKDGDDEWTS---VVVANVSKYIVSGTPTFVP 800

Query: 377  GQYTCRAQTELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
                 +A   + F    A +T      +P+ AP N   + V+++  A V W+PV  +S+R
Sbjct: 801  YLIKVQALNVMGFAPEPAVVTGHSGEDLPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIR 859

Query: 433  GHFRGYKVQTW-----TEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            G  +GY++  W     ++++     ++++  +G  T   +    P S     V   NG  
Sbjct: 860  GRLQGYRIYYWKAQSASQRNRRHLEKKILTFQGSKTHGMLPGLEPFSHYALNVRVVNGKG 919

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
             GP S   +F TPEGVP    SL+ +     +  L+W  P +PNG+L  Y +KYQ +  T
Sbjct: 920  EGPASPDRAFSTPEGVPSAPSSLKIVNPTLDSLTLEWDPPSRPNGILTEYTLKYQPINST 979

Query: 548  -KVGPLLE-RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
             ++GPL++ ++P       T   L  L  ST+Y+ +    T  G G++
Sbjct: 980  HELGPLIDLKIPA----NKTRWTLKNLNFSTRYKFYFYAQTSVGPGSQ 1023



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 140/605 (23%), Positives = 228/605 (37%), Gaps = 71/605 (11%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVP      +PS RI     G ++I  +V+      Y C  S
Sbjct: 374 LICRANGNPKPRISWLTNGVPTEIAPDDPSRRID----GDTIIFSNVQERSSAVYQCNAS 429

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA     + P               +C   G P P I W    K 
Sbjct: 430 NEYGYLLANAF-VNVLAELPRILTPANTLYQVIANRPAFLDCAFFGSPLPTIEWFKGAK- 487

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K ++G Y C A N LG    +V++ +      I + 
Sbjct: 488 -GSALHEDIYVIHENGTLEIPVAQKDNSGTYTCVARNKLGVAKNEVHLEI-KDPTRILKQ 545

Query: 225 PKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ +  EL       ++   L +TDV  +D 
Sbjct: 546 PEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDNGELPNDERFTVDKDHLVVTDVRDSDG 605

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L     S  L+V +   +   P D E+              D S++LS  
Sbjct: 606 GIYTCVANTTLDEVSASAVLSVVD---VPSPPFDLELTDQL----------DKSVQLS-- 650

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    ++  +      S    + Q          F + A+ +
Sbjct: 651 WTPGDDNNSPITKFIIEYEDAMHEAGLWHHQAEVSGTQTTAQLKLSPYVNYSFRVMAENS 710

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 711 IGRSLPSEASEQYQTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 769

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   +++  + E
Sbjct: 770 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNVMGFAPEPAVVTGHSGE 826

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   +    +    LE+ 
Sbjct: 827 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGRLQGYRIYYWKAQSASQRNRRHLEKK 886

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A     F  P       EG  S P
Sbjct: 887 ILTFQGSKTHGMLPGLEPFSHYALNVRVVNGKGEGPASPDRAFSTP-------EGVPSAP 939

Query: 616 NNLVI 620
           ++L I
Sbjct: 940 SSLKI 944



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 133/342 (38%), Gaps = 53/342 (15%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNGKPIS-QAP 170
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  ISALEVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKD 86

Query: 171 PNPRRKVGPNRITIENLR--KSDT--GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
           P    K G   + I  +   K++T  G Y C A N  G    +  V   + +P  T+   
Sbjct: 87  PLVTMKPGSGTLIINIMSEGKAETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKL 146

Query: 227 DEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKITDVAFADS 282
           +  T+ +G+ +VL CR   G P   + W+ N  Q+     R +    GDL  ++V   D+
Sbjct: 147 EPITLQNGQPLVLPCRPPIGLPPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDT 206

Query: 283 GE-YTCFAR-NKLGTAQGSGSLTVKE------HTHITDQPEDYEVEAGQSATFR------ 328
            E Y C+AR N   T Q    +++K       +  I     D E    +S+  R      
Sbjct: 207 REDYICYARFNHTQTIQQKQPISLKVISVDELNDTIAANLSDTEFYGAKSSKERPPTFLT 266

Query: 329 --CNAVSDPSLKLSIV---------------WLRGSEPIDFESEPRFVQSNDYSLTVTKS 371
              NA     L+ +++               W++  E     +   F ++   +L + + 
Sbjct: 267 PEGNASRKEELRGNVLSLECIAEGLPTPLIYWIK--EDGTLPANRTFYRNFQKTLQIIQV 324

Query: 372 SELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
           SE DSG Y C A+  L  I    ++TV+     + AP N  L
Sbjct: 325 SEADSGNYQCIAKNTLGIIRHTISVTVKAAPYWIMAPRNLVL 366


>gi|1621283|gb|AAC50765.1| hBRAVO/Nr-CAM precursor [Homo sapiens]
          Length = 1299

 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 143/404 (35%), Positives = 199/404 (49%), Gaps = 41/404 (10%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           LR   + L CI  G P P   W+K DG  + P +R    N+ K+L I HV  +D G+Y C
Sbjct: 278 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIIHVSEADSGNYQC 335

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N +G A  ++I + V AAPY+   P+ +  +  E  T  C+A+G P+P I W+ NG 
Sbjct: 336 IAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 394

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI  AP +P RK+  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I   
Sbjct: 395 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 454

Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITD----- 276
               Y V   +  +L C  FG+P P + W    K   L    Y + E G L+I D     
Sbjct: 455 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIKDATWIV 514

Query: 277 ----VAFADS-GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
               VA  DS G YTC ARNKLG A        K   H+  QPE   V+ G   +F C  
Sbjct: 515 KEIPVAQKDSTGTYTCVARNKLGMA--------KNEVHL--QPEYAVVQRGSMVSFECKV 564

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
             D +L L+++WL+ +   +  S+ RF    D+ L V   S+ DSG YTC A T LD + 
Sbjct: 565 KHDHTLSLTVLWLKDNR--ELPSDERFTVDKDH-LVVADVSDDDSGTYTCVANTTLDSVS 621

Query: 392 AQATLTVQVPLEAPS----------NFTLIQVIDAKKAVVSWNP 425
           A A L+V  P   P+          +  L   +D K   +SW P
Sbjct: 622 ASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWTP 664



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 146/607 (24%), Positives = 244/607 (40%), Gaps = 93/607 (15%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSK--DGVPINPSDRISQGN-----YGKSLIIKHVEFSD 98
            + N+   L C F G+PLP   W K   G  ++    +   N        + I+K +  + 
Sbjct: 462  IANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIKDATWIVKEIPVAQ 521

Query: 99   Q---GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLP 153
            +   G+YTC   N +G AK+              ++PE+        V+FECK       
Sbjct: 522  KDSTGTYTCVARNKLGMAKNE-----------VHLQPEYAVVQRGSMVSFECKVKHDHTL 570

Query: 154  EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
               + W+ + +   + P + R  V  + + + ++   D+G Y C A  +L  V     ++
Sbjct: 571  SLTVLWLKDNR---ELPSDERFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLS 627

Query: 214  VLAHAP------EITEAPKDEYTVD--GKTVVLT----------CRVF------GAPKPE 249
            V+A  P      ++   P D    D   K+V L+             F         KP 
Sbjct: 628  VVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPG 687

Query: 250  VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGS---------G 300
            + W H+Q E++G +     T  LK++      +  +   A N +G +  S          
Sbjct: 688  L-W-HHQTEVSGTQ----TTAQLKLSPYV---NYSFRVMAVNSIGKSLPSEASEQYLTKA 738

Query: 301  SLTVKEHTHIT---DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
            S   K  T +     +P++ E+       F  N    P L+  + W +     ++ S   
Sbjct: 739  SEPDKNPTAVEGLGSEPDNLEITWKPLNGFESNG---PGLQYKVSWRQKDGDDEWTS--- 792

Query: 358  FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ----VPLEAPSNFTLIQV 413
             V +N     V+ +          +A  ++ F    A +       +P+ AP N   + V
Sbjct: 793  VVVANVSKYIVSGTPTFVPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVR-VNV 851

Query: 414  IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK-----GESTTTEVD 468
            +++  A V W+PV  +S+RGH +GY++  W  +      R  I  K     G  T   + 
Sbjct: 852  VNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLP 911

Query: 469  KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPE 528
               P S     V   NG   GP S    F TPEGVP    SL+ +     +  L+W  P 
Sbjct: 912  GLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVNPTLDSLTLEWDPPS 971

Query: 529  QPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYT 586
             PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L  ST+Y+ +    T
Sbjct: 972  HPNGILTEYTLKYQPINSTHELGPLVDLKIP----ANKTRWTLKNLNFSTRYKFYFYAQT 1027

Query: 587  KAGDGAE 593
             AG G++
Sbjct: 1028 SAGSGSQ 1034



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 147/571 (25%), Positives = 231/571 (40%), Gaps = 72/571 (12%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W    K     P N  R V  N    + I ++ ++D+GNY C A
Sbjct: 283 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 337

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK-- 257
            N+LG ++  + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 338 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 396

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N+ G    +  + V         P +
Sbjct: 397 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPAN 456

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGS------EPIDFESEPRFVQSNDYSLTV 368
             Y+V A + A   C     P    +I W +G+      E I    E   ++  D +  V
Sbjct: 457 TLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALHEDIYVLHENGTLEIKDATWIV 514

Query: 369 TK---SSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            +   + +  +G YTC A+ +L   + +  L  +        + ++Q    + ++VS+  
Sbjct: 515 KEIPVAQKDSTGTYTCVARNKLGMAKNEVHLQPE--------YAVVQ----RGSMVSF-- 560

Query: 426 VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNG 485
              +    H     +     KD     REL  +  E  T + D  V A  +      +  
Sbjct: 561 ---ECKVKHDHTLSLTVLWLKDN----RELPSD--ERFTVDKDHLVVADVSDDDSGTYTC 611

Query: 486 AYNG-----PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGV 533
             N        S ++S V P   P  V  +   P           +  L W   +  N  
Sbjct: 612 VANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSP 671

Query: 534 LMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-- 591
           +  + I+Y+        P L         T T+A+L  L P   Y   +      G    
Sbjct: 672 ITKFIIEYEDAMHK---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNSIGKSLP 727

Query: 592 --AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTG 647
             A  +YL     P KNP  VEG GS P+NL I+W  +   E N P  +Y++ WR+ +  
Sbjct: 728 SEASEQYLTKASEPDKNPTAVEGLGSEPDNLEITWKPLNGFESNGPGLQYKVSWRQKDGD 787

Query: 648 EAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           + W    V+    S+ +++  PTF PY IKV
Sbjct: 788 DEWTS--VVVANVSKYIVSGTPTFVPYLIKV 816



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 136/615 (22%), Positives = 225/615 (36%), Gaps = 81/615 (13%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I  +V+      Y C  S
Sbjct: 375 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 430

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGK- 164
           N  G   + +  ++VLA P   + P               +C   G P P I W    K 
Sbjct: 431 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKG 489

Query: 165 -----PISQAPPNPRRKVGPNRITIENL---RKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
                 I     N   ++      ++ +   +K  TG Y C A N LG    +V++    
Sbjct: 490 SALHEDIYVLHENGTLEIKDATWIVKEIPVAQKDSTGTYTCVARNKLGMAKNEVHL---- 545

Query: 217 HAPEITEAPKDEYTV--DGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDL 272
                    + EY V   G  V   C+V         V W+ + +EL       ++   L
Sbjct: 546 ---------QPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNRELPSDERFTVDKDHL 596

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV 332
            + DV+  DSG YTC A   L +   S  L+V     +   P    V    +  F     
Sbjct: 597 VVADVSDDDSGTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELT 651

Query: 333 SDPSLKLSIVWLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
                 + + W  G +   PI     E E    +   +      S    + Q        
Sbjct: 652 DQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLKLSPYVN 711

Query: 387 LDF-IEAQATLTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLR 432
             F + A  ++   +P EA   +           T ++ + ++     ++W P++     
Sbjct: 712 YSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLEITWKPLNGFESN 771

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
           G    YKV +W +KDG+     ++V N  +   +    FVP      +V A N     P 
Sbjct: 772 GPGLQYKV-SWRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDMGFAPE 827

Query: 492 SEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT- 547
             ++   + E +P     ++    + S+   + W  V  +   G L GY+I Y   + + 
Sbjct: 828 PAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSS 887

Query: 548 -KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNP 605
            +    +E+       + T   L GLEP + Y +++      G+G A    +F  P    
Sbjct: 888 KRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP---- 943

Query: 606 DNVEGRGSTPNNLVI 620
              EG  S P++L I
Sbjct: 944 ---EGVPSAPSSLKI 955



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 126/315 (40%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
           E +  +C+A G P P   W  NG        P+    P      G   I I +  K++T 
Sbjct: 57  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 112

Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
            G Y C A N  G    +  V   + +P  T+   +  T+  G+++VL CR      P +
Sbjct: 113 EGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 172

Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
             W+ N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK
Sbjct: 173 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 232

Query: 306 E------HTHITDQPEDYEVEAGQSATFR--------CNAVSDPSLKLSIVWLRG----- 346
                  +  I     D E    +S+  R         NA +   L+ +++ L       
Sbjct: 233 VISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGL 292

Query: 347 SEPIDFESEP-------RFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             PI + ++        R V  N + +L +   SE DSG Y C A+  L  I    ++ V
Sbjct: 293 PTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRV 352

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 353 KAAPYWITAPQNLVL 367



 Score = 39.7 bits (91), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWI 253
           + C   ++L        +  L   P IT+    +Y +D +  +V+ C   G P P  +W 
Sbjct: 17  FLCQMISALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWT 76

Query: 254 HNQKELTGGRYTILE----TGDLKITDVAFADS----GEYTCFARNKLGTAQGSGSLTVK 305
            N       +  ++     TG L I  ++   +    G Y C ARN+ G A  +  +   
Sbjct: 77  RNGTHFDIDKDPLVTMKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRP 136

Query: 306 EHTHI--TDQPEDYEVEAGQSATFRC 329
             + +   ++ E   +++GQS    C
Sbjct: 137 SRSPLWTKEKLEPITLQSGQSLVLPC 162


>gi|47224415|emb|CAG08665.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 920

 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 179/642 (27%), Positives = 274/642 (42%), Gaps = 98/642 (15%)

Query: 24  ISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRIS 81
           +S   NR  P    V      AL  + + L C   G P+P  +W K DG +P N   R +
Sbjct: 203 LSERHNRKYPADLNVKFPDTTALVGQNITLECFALGNPVPDIMWKKVDGELPSNHEVRTA 262

Query: 82  QGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEE 141
               G  L + +V+F D G+Y CE  N  G+   ++  LSV A P +    E I   E++
Sbjct: 263 ----GAHLHLFNVQFEDSGTYKCEAVNSKGK-DYHTARLSVEAFPEWV---EHITNTEKD 314

Query: 142 T---VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCN 198
                T  C ASG PEP+I W+ NG+ + +             ++  +L   D+G Y C 
Sbjct: 315 LGSDYTMSCVASGKPEPQIRWMKNGELLDR-----------KEMSFRSLTFDDSGMYQCI 363

Query: 199 ATNSLGYVYKDVYVNVLAHAPEITEAP-KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK 257
           A N  G +Y +  + V A AP     P K         VV+ CR  GAPKP   W  + +
Sbjct: 364 AANRHGVIYANAELRVFACAPTFRHNPLKRVLAPRNGRVVIKCRPKGAPKPTFTWSKDTE 423

Query: 258 ELTGG-RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
            L+   R  I E G L+I +V  AD G YTCFA N  G A  +GSL V E T IT  P  
Sbjct: 424 LLSNSTRVFIWEDGSLEILNVTRADEGRYTCFAENDRGKANSTGSLLVLESTKITLAPSS 483

Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQ-----SNDYSLTVTKS 371
            +V+AG++A   C A  DPSL ++ +W      ID  ++ +  +     S++ +L +  +
Sbjct: 484 ADVKAGENALMHCAASHDPSLDIAFIWSLDGHVIDLHTDSQHYERGTNGSSNGALLIKNA 543

Query: 372 SELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVID---------------- 415
               +G+YTC AQT +D + A A L V+ P +   N     V+D                
Sbjct: 544 QLKHAGRYTCTAQTPIDNVAASAHLVVRAPPDVEGNAEKATVVDLFPWTEYEFRVIAANT 603

Query: 416 ---------------------------------AKKAVVSWNPVSPQSLRGHFRGYKVQT 442
                                            +++  ++W PV PQ   G   GY V  
Sbjct: 604 LGTGEPSSPSPKEKTLDAIPVVAPSNISGGGGTSRELTITWTPVQPQHYYGPNFGYIV-A 662

Query: 443 WTEKDGEGSIRELIVNKGESTTTEVD-KFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           +   D     + ++ +    +    D  F P +K   +V AFN    GP S      + +
Sbjct: 663 FRPYDNREWRKVMVADPLARSYIHKDLTFPPLTKFQVKVKAFNSKGEGPFSLAAVIYSAQ 722

Query: 502 GVPGTVQS-LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY-----QSVKGTKVGPLLER 555
             P    +  +   L ++  ++ W+    P   + GY++K+     +S  G +       
Sbjct: 723 DAPSEAPAGFDGKALSATEAFVWWLP--LPQDSIDGYQVKFWRNHEESEGGAQT------ 774

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL 597
               +  T TS +L G++P++ Y I + GY  AG G  S+ L
Sbjct: 775 --VTASNTDTSTRLEGMKPNSNYLIEVWGYNTAGFGPPSERL 814



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 146/660 (22%), Positives = 242/660 (36%), Gaps = 117/660 (17%)

Query: 72  VPINPSDRISQ--GNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYS--IDLSVLAAPY 127
           +P++    +SQ  GN    L I  V+ SD G+Y+C  S+       +S  I L  L+  +
Sbjct: 152 IPLDKRRFVSQITGN----LYISKVDSSDSGNYSCIASSPSISKSVFSNYIPLVPLSERH 207

Query: 128 FTVEPEFINAAEEET-------VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN 180
               P  +N    +T       +T EC A G P P+I W    K   + P N   +    
Sbjct: 208 NRKYPADLNVKFPDTTALVGQNITLECFALGNPVPDIMW---KKVDGELPSNHEVRTAGA 264

Query: 181 RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC 240
            + + N++  D+G Y C A NS G  Y    ++V A  PE  E   +     G    ++C
Sbjct: 265 HLHLFNVQFEDSGTYKCEAVNSKGKDYHTARLSVEAF-PEWVEHITNTEKDLGSDYTMSC 323

Query: 241 RVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSG 300
              G P+P++ W+ N +        +L+  ++    + F DSG Y C A N+ G    + 
Sbjct: 324 VASGKPEPQIRWMKNGE--------LLDRKEMSFRSLTFDDSGMYQCIAANRHGVIYANA 375

Query: 301 SLTVKEHTHITDQPEDYEVEAGQSA--TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF 358
            L V              V A ++     +C     P  K +  W + +E +   +  R 
Sbjct: 376 ELRVFACAPTFRHNPLKRVLAPRNGRVVIKCRPKGAP--KPTFTWSKDTELL--SNSTRV 431

Query: 359 VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV----QVPLEAPS-------- 406
               D SL +   +  D G+YTC A+ +     +  +L V    ++ L APS        
Sbjct: 432 FIWEDGSLEILNVTRADEGRYTCFAENDRGKANSTGSLLVLESTKITL-APSSADVKAGE 490

Query: 407 --------------NFTLIQVIDAKKAVVSWNPVSPQSLRG-----------------HF 435
                         +   I  +D    V+  +  S    RG                 H 
Sbjct: 491 NALMHCAASHDPSLDIAFIWSLDGH--VIDLHTDSQHYERGTNGSSNGALLIKNAQLKHA 548

Query: 436 RGYKVQTWTEKDGEGSIRELIVN-----KGESTTTEVDKFVPASKNFARVLAFNGAYNGP 490
             Y     T  D   +   L+V      +G +    V    P ++   RV+A N    G 
Sbjct: 549 GRYTCTAQTPIDNVAASAHLVVRAPPDVEGNAEKATVVDLFPWTEYEFRVIAANTLGTGE 608

Query: 491 PS---------EIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKI 539
           PS         + I  V P  + G   +       S    + W  V+P+   G   GY +
Sbjct: 609 PSSPSPKEKTLDAIPVVAPSNISGGGGT-------SRELTITWTPVQPQHYYGPNFGYIV 661

Query: 540 KYQSVKGTKVGPLLERLPYISDPTTTS--AKLAGLEPSTKYRIHLAGYTKAGDGAES-KY 596
            ++     +   ++     ++DP   S   K     P TK+++ +  +   G+G  S   
Sbjct: 662 AFRPYDNREWRKVM-----VADPLARSYIHKDLTFPPLTKFQVKVKAFNSKGEGPFSLAA 716

Query: 597 LFY----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
           + Y     P + P   +G+  +     + W  +P+   +    K   FWR H   E   Q
Sbjct: 717 VIYSAQDAPSEAPAGFDGKALSATEAFVWWLPLPQDSIDGYQVK---FWRNHEESEGGAQ 773



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 111/285 (38%), Gaps = 44/285 (15%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITI 184
           P  T+ PE    + E+ +T  C+A   P     W  +   I   A  +    +G N +  
Sbjct: 16  PVETIYPE---ESPEDRITMNCRARASPPATYKWRKDNTEIDFSAEGSHYSLMGGNLVIS 72

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDV------YVNVLAHAPEITEAPKDEYTVDGKTVVL 238
             +++   GNY C A N+ G V          Y+++ +     +E  +  Y  +G+  VL
Sbjct: 73  SPVKEQHVGNYSCLAANAFGAVVSREASVQFGYLDLFS-----SEEREAVYVKEGQGAVL 127

Query: 239 TCRVFGAPKPE------VNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCF 288
            C    AP P         WI N+      L   R+    TG+L I+ V  +DSG Y+C 
Sbjct: 128 LC----APPPHYPAELSFRWILNEFPTFIPLDKRRFVSQITGNLYISKVDSSDSGNYSCI 183

Query: 289 ARN-KLGTAQGSG--SLTVKEHTHITDQPEDYEVE-------AGQSATFRCNAVSDPSLK 338
           A +  +  +  S    L      H    P D  V+        GQ+ T  C A+ +P   
Sbjct: 184 ASSPSISKSVFSNYIPLVPLSERHNRKYPADLNVKFPDTTALVGQNITLECFALGNPVPD 243

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +    + G  P + E     V++    L +      DSG Y C A
Sbjct: 244 IMWKKVDGELPSNHE-----VRTAGAHLHLFNVQFEDSGTYKCEA 283



 Score = 46.6 bits (109), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 83/205 (40%), Gaps = 28/205 (13%)

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            P EAP+ F   + + A +A V W P+   S+ G    Y+V+ W   +      + +   
Sbjct: 724 APSEAPAGFDG-KALSATEAFVWWLPLPQDSIDG----YQVKFWRNHEESEGGAQTVTAS 778

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG--------VPGTVQSLE 511
              T+T ++   P S     V  +N A  GPPSE +   T +          P     + 
Sbjct: 779 NTDTSTRLEGMKPNSNYLIEVWGYNTAGFGPPSERLVIRTKKARTSFCCCLTPSQPPRIT 838

Query: 512 AIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKL 569
           +  +      + W   +P+     + GYK+ Y+  +G+  G L           TTS + 
Sbjct: 839 SKRMKGHTINIAWENSQPQPDEAAIDGYKVLYRK-QGSSQGKLY----------TTSRRS 887

Query: 570 AGLE-PST-KYRIHLAGYTKAGDGA 592
             L  PS   Y + +  +T+ GDGA
Sbjct: 888 IDLPLPSEGNYMVEVRAHTEGGDGA 912



 Score = 45.1 bits (105), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 70/171 (40%), Gaps = 16/171 (9%)

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT----GGRYTILETGDLKITD-V 277
           E+P+D  T++       CR   +P     W  +  E+     G  Y+++  G+L I+  V
Sbjct: 24  ESPEDRITMN-------CRARASPPATYKWRKDNTEIDFSAEGSHYSLM-GGNLVISSPV 75

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDP 335
                G Y+C A N  G      +     +  +  +++ E   V+ GQ A   C      
Sbjct: 76  KEQHVGNYSCLAANAFGAVVSREASVQFGYLDLFSSEEREAVYVKEGQGAVLLCAPPPHY 135

Query: 336 SLKLSIVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
             +LS  W+    P      + RFV     +L ++K    DSG Y+C A +
Sbjct: 136 PAELSFRWILNEFPTFIPLDKRRFVSQITGNLYISKVDSSDSGNYSCIASS 186



 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 9/152 (5%)

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNP 605
           L+ R P   +     A +  L P T+Y   +      G G  S      K L  +P   P
Sbjct: 568 LVVRAPPDVEGNAEKATVVDLFPWTEYEFRVIAANTLGTGEPSSPSPKEKTLDAIPVVAP 627

Query: 606 DNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVL 665
            N+ G G T   L I+WT +    +  P+F Y + +R ++  E W +  V D      + 
Sbjct: 628 SNISGGGGTSRELTITWTPVQPQHYYGPNFGYIVAFRPYDNRE-WRKVMVADPLARSYIH 686

Query: 666 ANQ--PTFQPYEIKVVQTWTEKDGEGSIRELI 695
            +   P    +++KV    ++ +G  S+  +I
Sbjct: 687 KDLTFPPLTKFQVKVKAFNSKGEGPFSLAAVI 718


>gi|40254254|ref|NP_766388.2| protein sidekick-2 precursor [Mus musculus]
 gi|81893041|sp|Q6V4S5.1|SDK2_MOUSE RecName: Full=Protein sidekick-2; Flags: Precursor
 gi|34101308|gb|AAQ57661.1| sidekick 2 [Mus musculus]
          Length = 2176

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 176/606 (29%), Positives = 259/606 (42%), Gaps = 34/606 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V     +V + C+    PL +   +W KDG P+  S  IS  +Y + L I +   S
Sbjct: 226 KNTSVVAGTSEVTMECVANARPLIKLHIVWKKDGAPL--SSGIS--DYNRRLTIANPTVS 281

Query: 98  DQGSYTCEV---SNGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLP 153
           D G Y CE    S+ V      +  LSVL  P F  EPE  I A  E+ V   C+A G+P
Sbjct: 282 DAGYYECEAMLRSSSVAPVTRGAY-LSVLEPPQFVREPERHITAEMEKVVDIPCRAKGVP 340

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
            P I W  +   +        ++     + I  L   DTG   C A N+ G      Y+ 
Sbjct: 341 PPSITWYKDAALVEVGKLTRFKQRSDGGLQISGLLPDDTGMLQCFAHNAAGEAQTSTYLA 400

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T+LE
Sbjct: 401 VTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLE 460

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+  
Sbjct: 461 SGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMV 520

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C    DP + +  VW +    +  E+ PR     + SL ++++   D G YTCR  +   
Sbjct: 521 CGVTHDPRVTVRYVWEKDGATLAVETNPRIRLDRNGSLHISQTWSGDIGTYTCRVLSAGG 580

Query: 389 FIEAQATLTVQVPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
                A L V+    AP +    +  ++ +   ++W    P         Y ++  +E +
Sbjct: 581 NDSRNAHLRVRQLPHAPEHPVATLSTVERRAINLTW--AKPFDGNSPLMRYVLEM-SENN 637

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV 507
              +I    V+  E+T+  V   VPA     R+ A N    G  S+    V+    P T 
Sbjct: 638 APWTILLASVDP-EATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTA 696

Query: 508 QSLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
                I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I+D  
Sbjct: 697 PPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRY-CLAGLPVG---YQFKNITDAD 752

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNL 618
             +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    +    +
Sbjct: 753 VNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTI 812

Query: 619 VISWTA 624
             +W A
Sbjct: 813 RFTWNA 818



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 182/684 (26%), Positives = 271/684 (39%), Gaps = 75/684 (10%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K+Q V   +   +R  ++  F      P PQ  W +DG  I PS RI+      +L+I  
Sbjct: 124 KRQSVNHGEAAVIRAPRISSF------PRPQVTWFRDGRKIPPSSRIAI-TLENTLVILS 176

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFINAAEEET------- 142
               D G Y  + V++  G+ K S  I L+V  +  P   + P  I   +  +       
Sbjct: 177 TVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSE 236

Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
           VT EC A+  P  ++H  W  +G P+S    +  R     R+TI N   SD G Y C A 
Sbjct: 237 VTMECVANARPLIKLHIVWKKDGAPLSSGISDYNR-----RLTIANPTVSDAGYYECEAM 291

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+  V +  Y++VL   P+    P+   T + + VV + CR  G P P + W  + 
Sbjct: 292 LRSSSVAPVTRGAYLSVL-EPPQFVREPERHITAEMEKVVDIPCRAKGVPPPSITWYKDA 350

Query: 257 KELTGGRYTILET---GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITD 312
             +  G+ T  +    G L+I+ +   D+G   CFA N  G AQ S  L V     +IT 
Sbjct: 351 ALVEVGKLTRFKQRSDGGLQISGLLPDDTGMLQCFAHNAAGEAQTSTYLAVTSIAPNITR 410

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTK 370
            P D  V  G S    C     P  + +I W +G   +   S   PRF      SL ++ 
Sbjct: 411 GPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTLLESGSLLISP 468

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQS 430
           +   D+G YTC A       EA A L V          T I      ++V+     S   
Sbjct: 469 THISDAGTYTCLATNSRGVDEASADLVVWA-------RTRITKPPQDQSVIKGTQASMVC 521

Query: 431 LRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFA--------RVLA 482
              H     V+   EKDG      L V        + +  +  S+ ++        RVL+
Sbjct: 522 GVTHDPRVTVRYVWEKDGA----TLAVETNPRIRLDRNGSLHISQTWSGDIGTYTCRVLS 577

Query: 483 FNGAYNGPPSEIISFV--TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
             G  +      +  +   PE    T+ ++E       A  L W KP   N  LM Y ++
Sbjct: 578 AGGNDSRNAHLRVRQLPHAPEHPVATLSTVE-----RRAINLTWAKPFDGNSPLMRYVLE 632

Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV 600
             S        LL  +    DP  TS  + GL P+  Y+  L      G G  SK    V
Sbjct: 633 -MSENNAPWTILLASV----DPEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERV 687

Query: 601 ------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
                 P   P NV   G T  +++I W   PE   N     Y I +        +   +
Sbjct: 688 SLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKN 747

Query: 655 VLDWRQSELVLANQPTFQPYEIKV 678
           + D   + L+L +   +  YEI+V
Sbjct: 748 ITDADVNNLLLEDLIIWTNYEIEV 771



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 106/274 (38%), Gaps = 27/274 (9%)

Query: 126 PYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
           PYF  EP       E   +   C A G    E  W+HN + ++       R     R  I
Sbjct: 30  PYFKTEPVRTQVHLEGNRLVLTCMAEGSWPLEFKWLHNNRELT-------RFSLEYRYMI 82

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RVF 243
            +L ++  G Y C   N +G + +      +A+     E  K +    G+  V+   R+ 
Sbjct: 83  TSLDRTHAGFYRCIVRNRMGALLQRQTEVQVAYMGSFEEGEKRQSVNHGEAAVIRAPRIS 142

Query: 244 GAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSGS 301
             P+P+V W  + +++    R  I     L I      D+G Y   A N K G  + S  
Sbjct: 143 SFPRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQP 202

Query: 302 LTVK----------EHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEPI 350
           +T+               I   P++  V AG S  T  C A + P +KL IVW +   P+
Sbjct: 203 ITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIVWKKDGAPL 262

Query: 351 DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
                   +   +  LT+   +  D+G Y C A 
Sbjct: 263 S-----SGISDYNRRLTIANPTVSDAGYYECEAM 291



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 74/177 (41%), Gaps = 11/177 (6%)

Query: 422 SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR-- 479
           +WN  SPQ + G  +GYK+  W E   E  +  +        +  V  FV   K F    
Sbjct: 815 TWNAPSPQFINGINQGYKLIAW-EPAQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYF 872

Query: 480 --VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
             VL F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY
Sbjct: 873 TSVLCFTTPGDGPRSSPQLVRTHEDVPGPVGHLSFNDILDTSLKVSWQEPGEKNGILTGY 932

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           +I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 933 RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 984



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ +      G   GYKV+ + EKD +   R  +V  
Sbjct: 1202 VPSSGPTNVSALATTSSS-MLVRWSEIPEADRNGLVLGYKVR-YKEKDSDSQPRFWLVEG 1259

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1260 NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 1319

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P + Y
Sbjct: 1320 SVRLIWQPPAAPNGIILAYQITHRLNATTANTATVEVL----APSARQYMATGLKPESVY 1375

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1376 LFRITAQTRKGWGEAAEAL 1394



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N   I    A +  V+W P    +  G  +GYK+  W  +    + R   +  
Sbjct: 1626 VPTAAPQNVA-IHSATATQLDVTWEPPPLDNQNGDIQGYKIYFWEVQRRNLTERVKTLFL 1684

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E++  ++      +     V AFN A +GP S      T +  P    S++   L +++
Sbjct: 1685 AENSV-KLKNLTGYTAYMVSVAAFNAAGDGPRSTPTRGQTQQAAPSAPGSVKFSELTTTS 1743

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNG L GY++ Y+
Sbjct: 1744 VNVSWDAPQFPNGPLEGYRLVYE 1766



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 128/308 (41%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 962  LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGAPTNLGISN---------- 1007

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +   G I E    L++    N+ ++ + EV    P
Sbjct: 1008 IGPRSVTLQFRPGYDGKTSISRWVVEAQVGVIGEGEEWLLIYQLGNEPDARSMEVPDLNP 1067

Query: 473  ASKNFARVLAFNGAYNGPPSE----IISFVTPEGV-PGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    I +   P  + P  V    A     ++ +L+W+  
Sbjct: 1068 FTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDIAPANVTLRTA---SETSLWLRWMPL 1124

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY    G   G  L     + D       +  LE  T+YR+ + 
Sbjct: 1125 PEMEYNGNPESVGYKIKYGRSDGH--GKTLSHT--VQDRVEREYTIEDLEEWTEYRVQVQ 1180

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S+ +       VP   P NV    +T +++++ W+ +PE + N     Y+
Sbjct: 1181 AFNAIGSGPWSQAVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYK 1240

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1241 VRYKEKDS 1248



 Score = 40.0 bits (92), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 50/221 (22%), Positives = 84/221 (38%), Gaps = 36/221 (16%)

Query: 401  PLEAPSNFTLIQVI--DAKKAVVSWNPVSPQSLRGHFRGYKVQ----------------- 441
            P EAP   T++ V        ++ W P S   + G   G++++                 
Sbjct: 1505 PDEAP---TILSVTPHTTTSVLIRWQPPSEDKINGILLGFRIRYRELLYDGLRGFTLRGI 1561

Query: 442  -----TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS 496
                  W E     S+R L   +   T  E+D      +   R+  +N    GP S    
Sbjct: 1562 NNPGAKWAELTSLYSMRNL--TRPSLTQYELDNLSKHRRYEIRMSIYNAVGEGPLSPPQE 1619

Query: 497  FVTPEGVPGTV-QSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLL 553
                E VP    Q++      ++   + W  P  +  NG + GYKI +  V+   +   +
Sbjct: 1620 VFVGEAVPTAAPQNVAIHSATATQLDVTWEPPPLDNQNGDIQGYKIYFWEVQRRNLTERV 1679

Query: 554  ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            + L ++++    S KL  L   T Y + +A +  AGDG  S
Sbjct: 1680 KTL-FLAE---NSVKLKNLTGYTAYMVSVAAFNAAGDGPRS 1716


>gi|344291041|ref|XP_003417245.1| PREDICTED: protein sidekick-1 [Loxodonta africana]
          Length = 2262

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 180/605 (29%), Positives = 261/605 (43%), Gaps = 32/605 (5%)

Query: 40   RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
            +   V +   +V L C+    PL +   IW KDGV +  S  +S  N  + L I +   S
Sbjct: 422  KNTSVVVGTSEVTLECVANARPLIKLHIIWKKDGVLL--SGGVSDHN--RRLTIPNPTSS 477

Query: 98   DQGSYTCE--VSNGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPE 154
            D G Y CE  + +    A      LSVL  P F  EPE  I A  E+ V   C+A G+P 
Sbjct: 478  DAGYYECEAVLRSSSVPAVVRGAYLSVLEPPQFVKEPERHITAEMEKVVDIPCRAKGVPP 537

Query: 155  PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
            P I W  +   +     +  R  G   + I  L   DTG + C A N+ G V    Y+ V
Sbjct: 538  PSITWYKDAAVVEVERLSRFRLHGDGGLQISGLLPDDTGMFQCFARNAAGEVQTSTYLAV 597

Query: 215  LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILET 269
             + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T+LE+
Sbjct: 598  TSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLES 657

Query: 270  GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
            G L ++    +D+G Y C A N  G  + S  L V   T IT  P+D  V  G  A+  C
Sbjct: 658  GSLLVSPTHISDAGTYACLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVC 717

Query: 330  NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
                DP + +  VW +    +  ES PR     + SL ++++   D G YTCR  +    
Sbjct: 718  GVTHDPRVTVRYVWEKDGATLAMESNPRIRLDKNGSLHISQTWSGDIGTYTCRVLSAGGN 777

Query: 390  IEAQATLTVQVPLEAPSNFTLIQVIDAKKAV-VSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
                A L V+    AP +   I     K+A+ ++W    P         Y ++  +E + 
Sbjct: 778  DSRSAHLRVRQLPHAPEHPVAILSTMEKRAINLTW--AKPFDGNSPLIRYVLEM-SENNA 834

Query: 449  EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ 508
              ++    V+  E+T+  V   VPA     R+ A N    G  S+    V+    P T  
Sbjct: 835  PWTVLLASVDP-EATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAP 893

Query: 509  SLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT 564
                I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I+D   
Sbjct: 894  PQNVIASGRTNQSIMIQWQPPPESHQNGLLKGYIIRY-CLAGLPVG---YQFKNITDADV 949

Query: 565  TSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLV 619
             +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    +    + 
Sbjct: 950  NNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTAIR 1009

Query: 620  ISWTA 624
             +W A
Sbjct: 1010 FTWNA 1014



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 176/680 (25%), Positives = 266/680 (39%), Gaps = 67/680 (9%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K+Q V+  +   +R  ++  F      P PQ  W +DG  I PS RI+      +L+I  
Sbjct: 320 KRQIVSHGEAAVIRAPRIASF------PQPQVTWFRDGRKIPPSSRIAI-TLENTLVILS 372

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFINAAEEET------- 142
               D G Y  + V++  G+ K S  + L+V  +  P   + P  I   +  +       
Sbjct: 373 TVAPDAGRYYVQAVNDKNGDNKTSQPVTLAVENVGGPADPIAPTIIIPPKNTSVVVGTSE 432

Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
           VT EC A+  P  ++H  W  +G  +S    +  R     R+TI N   SD G Y C A 
Sbjct: 433 VTLECVANARPLIKLHIIWKKDGVLLSGGVSDHNR-----RLTIPNPTSSDAGYYECEAV 487

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+  V +  Y++VL   P+  + P+   T + + VV + CR  G P P + W  + 
Sbjct: 488 LRSSSVPAVVRGAYLSVL-EPPQFVKEPERHITAEMEKVVDIPCRAKGVPPPSITWYKDA 546

Query: 257 KEL---TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHITD 312
             +      R+ +   G L+I+ +   D+G + CFARN  G  Q S  L V     +IT 
Sbjct: 547 AVVEVERLSRFRLHGDGGLQISGLLPDDTGMFQCFARNAAGEVQTSTYLAVTSIAPNITR 606

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTK 370
            P D  V  G S    C     P  + +I W +G   +   S   PRF      SL V+ 
Sbjct: 607 GPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTLLESGSLLVSP 664

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQS 430
           +   D+G Y C A       EA A L V          T I      ++V+     S   
Sbjct: 665 THISDAGTYACLATNSRGVDEASADLVVWA-------RTRITKPPQDQSVIKGTQASMVC 717

Query: 431 LRGHFRGYKVQTWTEKDGEGSIRE----LIVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
              H     V+   EKDG     E    + ++K  S                RVL+  G 
Sbjct: 718 GVTHDPRVTVRYVWEKDGATLAMESNPRIRLDKNGSLHISQTWSGDIGTYTCRVLSAGGN 777

Query: 487 YNGPPSEIISFV--TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
            +      +  +   PE     + ++E       A  L W KP   N  L+ Y ++    
Sbjct: 778 DSRSAHLRVRQLPHAPEHPVAILSTME-----KRAINLTWAKPFDGNSPLIRYVLEMSE- 831

Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
                 P    L  + DP  TS  + GL P+  Y+  L      G G  SK    V    
Sbjct: 832 ---NNAPWTVLLASV-DPEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPE 887

Query: 601 --PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDW 658
             P   P NV   G T  +++I W   PE   N     Y I +        +   ++ D 
Sbjct: 888 EPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGLLKGYIIRYCLAGLPVGYQFKNITDA 947

Query: 659 RQSELVLANQPTFQPYEIKV 678
             + L+L +   +  YEI+V
Sbjct: 948 DVNNLLLEDLIIWTNYEIEV 967



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 117/313 (37%), Gaps = 36/313 (11%)

Query: 86  GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINA-AEEETVT 144
           GK  +I+         +TC V  G      Y +       PYF  EP       E   + 
Sbjct: 195 GKKTVIRATRLEAVALFTCVVQEG---GPGYDV------PPYFKTEPVRTQVHLEGNRLV 245

Query: 145 FECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLG 204
             C A G    E  W+HN + +++            R  I +L ++  G Y C   N +G
Sbjct: 246 LTCMAEGSWPLEFKWLHNNRELTKFSLE-------YRYMITSLDRTHAGFYRCIVRNRMG 298

Query: 205 YVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RVFGAPKPEVNWIHNQKEL-TGG 262
            + +      +A+     E  K +    G+  V+   R+   P+P+V W  + +++    
Sbjct: 299 ALLQRQTEVQVAYMGNFEEGEKRQIVSHGEAAVIRAPRIASFPQPQVTWFRDGRKIPPSS 358

Query: 263 RYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSGSLTVK----------EHTHIT 311
           R  I     L I      D+G Y   A N K G  + S  +T+               I 
Sbjct: 359 RIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPVTLAVENVGGPADPIAPTII 418

Query: 312 DQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTK 370
             P++  V  G S  T  C A + P +KL I+W +    +        V  ++  LT+  
Sbjct: 419 IPPKNTSVVVGTSEVTLECVANARPLIKLHIIWKKDGVLLSGG-----VSDHNRRLTIPN 473

Query: 371 SSELDSGQYTCRA 383
            +  D+G Y C A
Sbjct: 474 PTSSDAGYYECEA 486



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 11/177 (6%)

Query: 422  SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR-- 479
            +WN  SPQ + G  +GYK+  W E + E  +  +        +  V  FV   K F    
Sbjct: 1011 TWNAPSPQFINGINQGYKLIAW-EPEQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYF 1068

Query: 480  --VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
              VL F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY
Sbjct: 1069 TSVLCFTTPGDGPRSTPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGY 1128

Query: 538  KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            +I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 1129 RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 1180



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 13/202 (6%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V WN +      G   GYKV  + EKD +   R  +V  
Sbjct: 1398 VPSSGPTNVSALATTSSS-MLVRWNEIPEADRNGLVLGYKV-VYKEKDSDAHPRFWLVEG 1455

Query: 460  GESTTTEVDKFVPASKNFARVLAF----NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPL 515
              S + ++           +VLAF    +G+ + PP   I   T + VPG    +    +
Sbjct: 1456 NASRSAQLTGLGKYVLYEVQVLAFTRIGDGSRSHPP---ILERTLDDVPGPPVGILFPEV 1512

Query: 516  GSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
             +++  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P 
Sbjct: 1513 RTTSVRLIWQPPTAPNGIILAYQITHRLNATTANTATVEVL----APSARQYTATGLKPE 1568

Query: 576  TKYRIHLAGYTKAGDGAESKYL 597
              Y   +   T+ G G  ++ L
Sbjct: 1569 AVYLFRITAQTRKGWGEAAEAL 1590



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/308 (21%), Positives = 126/308 (40%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 1158 LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGAPTNLGISN---------- 1203

Query: 426  VSPQSLRGHFR-GYKVQTWTEK---------DGEGSIRELIV---NKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T   +          GEG   +L+    N+ ++ + EV    P
Sbjct: 1204 IGPRSVTLQFRPGYDGKTSISRWLVEAQMGVIGEGEEWQLVYQLHNEPDARSMEVPDLNP 1263

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 1264 FTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTA---SETSLWLRWMPL 1320

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY   +    G  L  +  + D       +  LE  T+YR+ + 
Sbjct: 1321 PEMEYNGNPESVGYKIKYS--RSDSHGKTLSHV--VHDRVEREYTIEDLEEWTEYRVQVQ 1376

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S+ +       VP   P NV    +T +++++ W  +PE + N     Y+
Sbjct: 1377 AFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWNEIPEADRNGLVLGYK 1436

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1437 VVYKEKDS 1444



 Score = 41.2 bits (95), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 39/80 (48%)

Query: 463  TTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYL 522
            T+ ++      +     V AFN A +GP S      T +  P    S++   L +++  +
Sbjct: 1773 TSVKLKNLTGYTAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSAPSSVKFSELTTTSVNV 1832

Query: 523  KWVKPEQPNGVLMGYKIKYQ 542
             W  P+ PNG+L GY++ Y+
Sbjct: 1833 SWEAPQFPNGILEGYRLVYE 1852


>gi|326911404|ref|XP_003202049.1| PREDICTED: neuronal cell adhesion molecule-like [Meleagris gallopavo]
          Length = 1326

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 160/528 (30%), Positives = 242/528 (45%), Gaps = 48/528 (9%)

Query: 43   EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
            +V LR   + L CI  G P P   W K+G  + P++R    N+ K+L I  V  +D G+Y
Sbjct: 496  KVELRGNVLLLECIAAGLPTPVIRWIKEGGEL-PANRTFFENFKKTLKIIDVSEADSGNY 554

Query: 103  TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
             C   N +G +  + I ++V A+PY+   P  +  +  E  T  C+A+G P+P I W+ N
Sbjct: 555  KCIARNILG-STHHVISVTVKASPYWITAPRNLVLSPGEDGTLICRANGNPKPSISWLTN 613

Query: 163  GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI- 221
            G PI+ AP +P R+V  + I    +++  +  Y CNA+N  GY+  + +VNVLA  P I 
Sbjct: 614  GVPIAIAPEDPSRRVDGDTIIFSAVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRIL 673

Query: 222  TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAF 279
            T A K    + G   ++ C  FG+PKPE+ W    K   L G  Y   + G L+I     
Sbjct: 674  TPANKLYQVIAGSPALIDCAYFGSPKPEIEWFKGVKGSILRGNEYVFHDNGTLEIPVAQK 733

Query: 280  ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
              +G YTC ARNKLG  Q    L VK+ T I  QPE   ++     +F C    DP+L  
Sbjct: 734  DSTGTYTCVARNKLGKTQNEVQLEVKDPTMIIKQPEYKVIQRSAQVSFECVIKHDPTLIP 793

Query: 340  SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            +++WL+ +   +   + RF+   + +LT+   ++ D G YTC   T LD + A A LTV 
Sbjct: 794  TVIWLKDNN--ELPDDERFLVGKE-NLTIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVV 850

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGS-IRELIVN 458
                 P+      +I A+      NP     L G        +W   +   S I   ++ 
Sbjct: 851  AAPPTPA------IIYARP-----NPPLDLELTGQLERSIELSWVPGEENNSPITNFVIE 899

Query: 459  -----------------KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IIS 496
                              G  TT ++ K  P      RV+A N      PSE     +  
Sbjct: 900  YEDGLHEPGVWHYQTEVPGSQTTVQL-KLSPYVNYSFRVIAVNEIGRSQPSEPSEQYLTK 958

Query: 497  FVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQ 542
               P+  P  VQ + + P       + W  +K  Q NG  + YK+ ++
Sbjct: 959  SANPDENPSNVQGIGSEP---DNLVITWESLKGFQSNGPGLQYKVSWR 1003



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 147/572 (25%), Positives = 234/572 (40%), Gaps = 74/572 (12%)

Query: 143  VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS---------DTG 193
            +  EC A+GLP P I W+  G            ++  NR   EN +K+         D+G
Sbjct: 504  LLLECIAAGLPTPVIRWIKEGG-----------ELPANRTFFENFKKTLKIIDVSEADSG 552

Query: 194  NYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWI 253
            NY C A N LG  +  + V V A +P    AP++     G+   L CR  G PKP ++W+
Sbjct: 553  NYKCIARNILGSTHHVISVTVKA-SPYWITAPRNLVLSPGEDGTLICRANGNPKPSISWL 611

Query: 254  HNQKELTGGRYTILETGD---LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
             N   +           D   +  + V    S  Y C A N+ G    +  + V      
Sbjct: 612  TNGVPIAIAPEDPSRRVDGDTIIFSAVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPR 671

Query: 311  TDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
               P +  Y+V AG  A   C     P  K  I W +G +         +V  ++ +L +
Sbjct: 672  ILTPANKLYQVIAGSPALIDCAYFGSP--KPEIEWFKGVKGSILRGN-EYVFHDNGTLEI 728

Query: 369  TKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNP 425
              + +  +G YTC A+ +L   + +  L V+ P   ++ P  + +IQ    + A VS+  
Sbjct: 729  PVAQKDSTGTYTCVARNKLGKTQNEVQLEVKDPTMIIKQPE-YKVIQ----RSAQVSFEC 783

Query: 426  VSPQSLRGHFRGYKVQTWTEKDGE---------GSIRELIVN---KGESTTTEVDKFVPA 473
            V    ++          W + + E         G     I+N   K + T T +      
Sbjct: 784  V----IKHDPTLIPTVIWLKDNNELPDDERFLVGKENLTIMNVTDKDDGTYTCIVNTTLD 839

Query: 474  SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV 533
            S + + VL    A   PP+  I +  P         LE       +  L WV  E+ N  
Sbjct: 840  SVSASAVLTVVAA---PPTPAIIYARP----NPPLDLELTGQLERSIELSWVPGEENNSP 892

Query: 534  LMGYKIKYQS-VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 592
            +  + I+Y+  +    V      +P     TT   KL+   P   Y   +    + G   
Sbjct: 893  ITNFVIEYEDGLHEPGVWHYQTEVP--GSQTTVQLKLS---PYVNYSFRVIAVNEIGRSQ 947

Query: 593  ES----KYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
             S    +YL     P +NP NV+G GS P+NLVI+W ++   + N P  +Y++ WR+ + 
Sbjct: 948  PSEPSEQYLTKSANPDENPSNVQGIGSEPDNLVITWESLKGFQSNGPGLQYKVSWRQKDV 1007

Query: 647  GEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
             + W    V+    S+ +++  PTF PYEIKV
Sbjct: 1008 DDEWT--SVVVANVSKYIVSGTPTFVPYEIKV 1037



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 143/591 (24%), Positives = 241/591 (40%), Gaps = 79/591 (13%)

Query: 55   CIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
            C + G+P P+  W K   G  +  ++ +   N   +L I   +    G+YTC   N +G+
Sbjct: 692  CAYFGSPKPEIEWFKGVKGSILRGNEYVFHDN--GTLEIPVAQKDSTGTYTCVARNKLGK 749

Query: 113  AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPE--PEIHWVHNGKPISQAP 170
             ++  + L V        +PE+        V+FEC     P   P + W+ +    ++ P
Sbjct: 750  TQN-EVQLEVKDPTMIIKQPEYKVIQRSAQVSFECVIKHDPTLIPTVIWLKDN---NELP 805

Query: 171  PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP----------- 219
             + R  VG   +TI N+   D G Y C    +L  V     + V+A  P           
Sbjct: 806  DDERFLVGKENLTIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVVAAPPTPAIIYARPNP 865

Query: 220  --------------EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
                          E++  P +E        V+     G  +P V W H Q E+ G + T
Sbjct: 866  PLDLELTGQLERSIELSWVPGEENNSPITNFVIEYE-DGLHEPGV-W-HYQTEVPGSQTT 922

Query: 266  ILETGDLKITDVAFADSGEYTCFARNKLGTAQGS--------GSLTVKEHTH----ITDQ 313
            +     LK++      +  +   A N++G +Q S         S    E+      I  +
Sbjct: 923  V----QLKLSPYV---NYSFRVIAVNEIGRSQPSEPSEQYLTKSANPDENPSNVQGIGSE 975

Query: 314  PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            P++  +       F+ N    P L+  + W +     ++ S    V +N     V+ +  
Sbjct: 976  PDNLVITWESLKGFQSNG---PGLQYKVSWRQKDVDDEWTS---VVVANVSKYIVSGTPT 1029

Query: 374  LDSGQYTCRAQTELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQ 429
                +   +A  +L +    + +       +P+ AP N   + VI++  A V W+PV  +
Sbjct: 1030 FVPYEIKVQALNDLGYAPEPSEVIGHSGEDLPMVAPGNVQ-VHVINSTLAKVHWDPVPLK 1088

Query: 430  SLRGHFRGYKVQTW-----TEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN 484
            S+RGH +GYKV  W     + +      ++++  +G  T   +    P S     V   N
Sbjct: 1089 SVRGHLQGYKVYYWKVQSLSRRSKRHVEKKILTFRGNKTFGMLPGLEPFSSYKLNVRVVN 1148

Query: 485  GAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
            G   GP S    F TPEGVP +   L+       +  L+W  P  PNGVL  Y +K+Q +
Sbjct: 1149 GKGEGPASPDKMFKTPEGVPSSPSFLKITNPTLDSLTLEWGSPTHPNGVLTSYILKFQPI 1208

Query: 545  KGT-KVGPLLE-RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
              T ++GPL+E R+P       +S  L  L  ST+Y+ +    T  G G++
Sbjct: 1209 NNTHELGPLVEIRIPA----NESSLILKNLNYSTRYKFYFNAQTSVGSGSQ 1255



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 113/441 (25%), Positives = 179/441 (40%), Gaps = 65/441 (14%)

Query: 30  RHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGV--PINPSDRISQGNYGK 87
           + +PK   V  ++ + ++       C   G P P   W+++G    I+   +++      
Sbjct: 266 QQSPKDYIVDPRENIVIQ-------CEAKGKPPPSFSWTRNGTHFDIDKDAQVTMKPNSG 318

Query: 88  SLIIKHVEF----SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFT---VEPEFINAAEE 140
           +L++  +      + +G Y C   N  G A S +I +    +P +T   +EP  +   E 
Sbjct: 319 TLVVNIMNGVKAEAYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEPNHVR--EG 376

Query: 141 ETVTFECKAS-GLPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTG-NYGC 197
           +++   C+   GLP P I W+ N     + P + R   G N  +   N++  DT  +Y C
Sbjct: 377 DSLVLNCRPPVGLPPPIIFWMDNA--FQRLPQSERVSQGLNGDLYFSNVQPEDTREDYIC 434

Query: 198 NA-----------------TNSLGYVYKDVYVNV----LAHAPEITEAP----------K 226
            A                   S+  +   +  N+    +  A  +TE P           
Sbjct: 435 YARFNHTQTIQQKQPISVKVFSMDSLNDTIAANLSDTDIYGAKPVTERPPVLLTPTGSTS 494

Query: 227 DEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILET--GDLKITDVAFADSGE 284
           ++  + G  ++L C   G P P + WI    EL   R T  E     LKI DV+ ADSG 
Sbjct: 495 NKVELRGNVLLLECIAAGLPTPVIRWIKEGGELPANR-TFFENFKKTLKIIDVSEADSGN 553

Query: 285 YTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWL 344
           Y C ARN LG+     S+TVK   +    P +  +  G+  T  C A  +P  K SI WL
Sbjct: 554 YKCIARNILGSTHHVISVTVKASPYWITAPRNLVLSPGEDGTLICRANGNP--KPSISWL 611

Query: 345 RGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEA 404
               PI    E    + +  ++  +   E  S  Y C A  E  ++ A A   V V  E 
Sbjct: 612 TNGVPIAIAPEDPSRRVDGDTIIFSAVQERSSAVYQCNASNEYGYLLANA--FVNVLAEP 669

Query: 405 PSNFT----LIQVIDAKKAVV 421
           P   T    L QVI    A++
Sbjct: 670 PRILTPANKLYQVIAGSPALI 690



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 150/616 (24%), Positives = 224/616 (36%), Gaps = 81/616 (13%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P   W  +GVPI     +PS R+     G ++I   V+      Y C  S
Sbjct: 596  LICRANGNPKPSISWLTNGVPIAIAPEDPSRRVD----GDTIIFSAVQERSSAVYQCNAS 651

Query: 108  NGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            N  G   + +  ++VLA P   + P  +            +C   G P+PEI W    K 
Sbjct: 652  NEYGYLLANAF-VNVLAEPPRILTPANKLYQVIAGSPALIDCAYFGSPKPEIEWFKGVKG 710

Query: 166  ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
             S    N         + I   +K  TG Y C A N LG    +V + V      I + P
Sbjct: 711  -SILRGNEYVFHDNGTLEIPVAQKDSTGTYTCVARNKLGKTQNEVQLEV-KDPTMIIKQP 768

Query: 226  KDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRYTILETGDLKITDVAFADSG 283
            + +       V   C +   P   P V W+ +  EL      ++   +L I +V   D G
Sbjct: 769  EYKVIQRSAQVSFECVIKHDPTLIPTVIWLKDNNELPDDERFLVGKENLTIMNVTDKDDG 828

Query: 284  EYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVW 343
             YTC     L +   S  LTV     +   P    + A  +              + + W
Sbjct: 829  TYTCIVNTTLDSVSASAVLTV-----VAAPPTPAIIYARPNPPLDLELTGQLERSIELSW 883

Query: 344  LRGSE---PI--------DFESEP------------------RFVQSNDYSLTVTKSSEL 374
            + G E   PI        D   EP                  +     +YS  V   +E+
Sbjct: 884  VPGEENNSPITNFVIEYEDGLHEPGVWHYQTEVPGSQTTVQLKLSPYVNYSFRVIAVNEI 943

Query: 375  DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
               Q    ++    ++   A      P E PSN   I   +    V++W  +      G 
Sbjct: 944  GRSQ---PSEPSEQYLTKSAN-----PDENPSNVQGIGS-EPDNLVITWESLKGFQSNGP 994

Query: 435  FRGYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNG-AYNGPPS 492
               YKV +W +KD +     ++V N  +   +    FVP      +V A N   Y   PS
Sbjct: 995  GLQYKV-SWRQKDVDDEWTSVVVANVSKYIVSGTPTFVPYE---IKVQALNDLGYAPEPS 1050

Query: 493  EIISFV---TPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT 547
            E+I       P   PG VQ      + S+   + W  V  +   G L GYK+ Y  V+  
Sbjct: 1051 EVIGHSGEDLPMVAPGNVQ---VHVINSTLAKVHWDPVPLKSVRGHLQGYKVYYWKVQSL 1107

Query: 548  --KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
              +    +E+         T   L GLEP + Y++++      G+G  S       FK P
Sbjct: 1108 SRRSKRHVEKKILTFRGNKTFGMLPGLEPFSSYKLNVRVVNGKGEGPASPDKM---FKTP 1164

Query: 606  DNVEGRGSTPNNLVIS 621
               EG  S+P+ L I+
Sbjct: 1165 ---EGVPSSPSFLKIT 1177



 Score = 39.3 bits (90), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 55/146 (37%), Gaps = 11/146 (7%)

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWI 253
           + C   ++L        +  L+  P IT+    +Y VD +  +V+ C   G P P  +W 
Sbjct: 238 FLCQMISALDVPLDSKLLEELSQPPTITQQSPKDYIVDPRENIVIQCEAKGKPPPSFSWT 297

Query: 254 HNQKEL---TGGRYTILETGDLKITDV-----AFADSGEYTCFARNKLGTAQGSGSLTVK 305
            N          + T+       + ++     A A  G Y C ARN+ G A  +  +   
Sbjct: 298 RNGTHFDIDKDAQVTMKPNSGTLVVNIMNGVKAEAYEGVYQCTARNERGAAISNNIVIRP 357

Query: 306 EHTHI--TDQPEDYEVEAGQSATFRC 329
             + +   ++ E   V  G S    C
Sbjct: 358 SRSPLWTKEKLEPNHVREGDSLVLNC 383


>gi|348568095|ref|XP_003469834.1| PREDICTED: neuronal cell adhesion molecule isoform 6 [Cavia
           porcellus]
          Length = 1192

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/400 (34%), Positives = 199/400 (49%), Gaps = 21/400 (5%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           +RK+E  LR   + L CI  G P P   W K+   + P++R    N+ K+L I  V  +D
Sbjct: 259 SRKEE--LRGNVLSLECIAEGLPTPLIYWIKEDGTL-PANRTFYRNFQKTLQIIQVSEAD 315

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G+Y C   N +G  + ++I ++V AAPY+ + P  +  +  E  T  C+A+G P+P I 
Sbjct: 316 SGNYQCIAKNTLGIIR-HTISVTVKAAPYWIMAPRNLVLSPGEDGTLICRANGNPKPRIS 374

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG P   AP +P R++  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  
Sbjct: 375 WLTNGVPTEIAPDDPSRRIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEL 434

Query: 219 PEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKIT 275
           P I       Y V   +   L C  FG+P P + W    K   L    Y I E G L+I 
Sbjct: 435 PRILTPANTLYQVIANRPAFLDCAFFGSPLPTIEWFKGAKGSALHEDIYVIHENGTLEIP 494

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
                +SG YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D 
Sbjct: 495 VAQKDNSGTYTCVARNKLGVAKNEVHLEIKDPTRILKQPEYAVVQRGGRVSFECKVKHDH 554

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
           +L  ++ WL+ +   +  ++ RF    D+ L VT   + D G YTC A T LD + A A 
Sbjct: 555 TLIATVTWLKDNG--ELPNDERFTVDKDH-LVVTDVRDSDGGIYTCVANTTLDEVSASAV 611

Query: 396 LTVQVPLEAPS----------NFTLIQVIDAKKAVVSWNP 425
           L+V  P   P+          +  L   +D K   +SW P
Sbjct: 612 LSVVAPTPTPAPIYDVPSPPFDLELTDQLD-KSVQLSWTP 650



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 161/639 (25%), Positives = 262/639 (41%), Gaps = 64/639 (10%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTC--EVSNGVGEAKSYSIDLSVLAA------PYF 128
           S+R+SQG  G       +    +  Y C    ++     +   I L V++A      P  
Sbjct: 191 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISLKVISAKSSKERPPT 250

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---R 181
            + PE   + +EE     ++ EC A GLP P I+W+   K     P N  R    N    
Sbjct: 251 FLTPEGNASRKEELRGNVLSLECIAEGLPTPLIYWI---KEDGTLPAN--RTFYRNFQKT 305

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR 241
           + I  + ++D+GNY C A N+LG +   + V V A AP    AP++     G+   L CR
Sbjct: 306 LQIIQVSEADSGNYQCIAKNTLGIIRHTISVTVKA-APYWIMAPRNLVLSPGEDGTLICR 364

Query: 242 VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQG 298
             G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    
Sbjct: 365 ANGNPKPRISWLTNGVPTEIAPDDPSRRIDGDTIIFSNVQERSSAVYQCNASNEYGYLLA 424

Query: 299 SGSLTVKEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           +  + V         P +  Y+V A + A   C     P    +I W +G++      + 
Sbjct: 425 NAFVNVLAELPRILTPANTLYQVIANRPAFLDCAFFGSP--LPTIEWFKGAKGSALHEDI 482

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQV 413
             +  N  +L +  + + +SG YTC A+ +L   + +  L ++ P   L+ P  + ++Q 
Sbjct: 483 YVIHENG-TLEIPVAQKDNSGTYTCVARNKLGVAKNEVHLEIKDPTRILKQPE-YAVVQ- 539

Query: 414 IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRE-LIVNKGESTTTEVDKFVP 472
              +   VS+       ++         TW + +GE    E   V+K     T+V     
Sbjct: 540 ---RGGRVSFE----CKVKHDHTLIATVTWLKDNGELPNDERFTVDKDHLVVTDVRD--- 589

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWV 525
           +       +A         S ++S V P   P  +  + + P           +  L W 
Sbjct: 590 SDGGIYTCVANTTLDEVSASAVLSVVAPTPTPAPIYDVPSPPFDLELTDQLDKSVQLSWT 649

Query: 526 KPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
             +  N  +  + I+Y+         L      +S  T T+A+L  L P   Y   +   
Sbjct: 650 PGDDNNSPITKFIIEYED--AMHEAGLWHHQAEVSG-TQTTAQLK-LSPYVNYSFRVMAE 705

Query: 586 TKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI 639
              G      A  +Y      P KNP  VEG GS P+NLVI+W  +   E N P  +Y++
Sbjct: 706 NSIGRSLPSEASEQYQTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV 765

Query: 640 FWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 766 SWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 802



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 139/595 (23%), Positives = 243/595 (40%), Gaps = 69/595 (11%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
            + N+   L C F G+PLP   W K        + I   +   +L I   +  + G+YTC 
Sbjct: 448  IANRPAFLDCAFFGSPLPTIEWFKGAKGSALHEDIYVIHENGTLEIPVAQKDNSGTYTCV 507

Query: 106  VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPE--PEIHWVHNG 163
              N +G AK+  + L +        +PE+        V+FECK          + W+ + 
Sbjct: 508  ARNKLGVAKN-EVHLEIKDPTRILKQPEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDN 566

Query: 164  KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP---- 219
                + P + R  V  + + + ++R SD G Y C A  +L  V     ++V+A  P    
Sbjct: 567  ---GELPNDERFTVDKDHLVVTDVRDSDGGIYTCVANTTLDEVSASAVLSVVAPTPTPAP 623

Query: 220  --EITEAPKDEYTVD--GKTVVLT--------------CRVFGAPKPEVNWIHNQKELTG 261
              ++   P D    D   K+V L+                 +     E    H+Q E++G
Sbjct: 624  IYDVPSPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQAEVSG 683

Query: 262  GRYTILETGDLKITDVAFADSGEYTCFARNKLGTA---------QGSGSLTVKEHTHIT- 311
             +     T  LK++      +  +   A N +G +         Q   +   K  T +  
Sbjct: 684  TQ----TTAQLKLSPYV---NYSFRVMAENSIGRSLPSEASEQYQTKAAEPDKNPTAVEG 736

Query: 312  --DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
               +P++  +       F  N    P L+  + W +     ++ S    V +N     V+
Sbjct: 737  LGSEPDNLVITWKPLNGFESNG---PGLQYKVSWRQKDGDDEWTS---VVVANVSKYIVS 790

Query: 370  KSSELDSGQYTCRAQTELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVSWNP 425
             +          +A   + F    A +T      +P+ AP N   + V+++  A V W+P
Sbjct: 791  GTPTFVPYLIKVQALNVMGFAPEPAVVTGHSGEDLPMVAPGNVR-VNVVNSTLAEVHWDP 849

Query: 426  VSPQSLRGHFRGYKVQTW-----TEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
            V  +S+RG  +GY++  W     ++++     ++++  +G  T   +    P S     V
Sbjct: 850  VPLKSIRGRLQGYRIYYWKAQSASQRNRRHLEKKILTFQGSKTHGMLPGLEPFSHYALNV 909

Query: 481  LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
               NG   GP S   +F TPEGVP    SL+ +     +  L+W  P +PNG+L  Y +K
Sbjct: 910  RVVNGKGEGPASPDRAFSTPEGVPSAPSSLKIVNPTLDSLTLEWDPPSRPNGILTEYTLK 969

Query: 541  YQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
            YQ +  T ++GPL++ ++P       T   L  L  ST+Y+ +    T  G G++
Sbjct: 970  YQPINSTHELGPLIDLKIPA----NKTRWTLKNLNFSTRYKFYFYAQTSVGPGSQ 1020



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 136/605 (22%), Positives = 223/605 (36%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVP      +PS RI     G ++I  +V+      Y C  S
Sbjct: 361 LICRANGNPKPRISWLTNGVPTEIAPDDPSRRID----GDTIIFSNVQERSSAVYQCNAS 416

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA     + P               +C   G P P I W    K 
Sbjct: 417 NEYGYLLANAF-VNVLAELPRILTPANTLYQVIANRPAFLDCAFFGSPLPTIEWFKGAK- 474

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K ++G Y C A N LG    +V++ +      I + 
Sbjct: 475 -GSALHEDIYVIHENGTLEIPVAQKDNSGTYTCVARNKLGVAKNEVHLEI-KDPTRILKQ 532

Query: 225 PKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ +  EL       ++   L +TDV  +D 
Sbjct: 533 PEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDNGELPNDERFTVDKDHLVVTDVRDSDG 592

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L     S  L+V     +   P    +    S  F           + + 
Sbjct: 593 GIYTCVANTTLDEVSASAVLSV-----VAPTPTPAPIYDVPSPPFDLELTDQLDKSVQLS 647

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    ++  +      S    + Q          F + A+ +
Sbjct: 648 WTPGDDNNSPITKFIIEYEDAMHEAGLWHHQAEVSGTQTTAQLKLSPYVNYSFRVMAENS 707

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 708 IGRSLPSEASEQYQTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 766

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   +++  + E
Sbjct: 767 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNVMGFAPEPAVVTGHSGE 823

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   +    +    LE+ 
Sbjct: 824 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGRLQGYRIYYWKAQSASQRNRRHLEKK 883

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A     F  P       EG  S P
Sbjct: 884 ILTFQGSKTHGMLPGLEPFSHYALNVRVVNGKGEGPASPDRAFSTP-------EGVPSAP 936

Query: 616 NNLVI 620
           ++L I
Sbjct: 937 SSLKI 941



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 122/294 (41%), Gaps = 26/294 (8%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   + I  +   K++T  G Y
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGSGTLIINIMSEGKAETYEGVY 121

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +  V   + +P  T+   +  T+ +G+ +VL CR   G P   + W+
Sbjct: 122 QCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQNGQPLVLPCRPPIGLPPAIIFWM 181

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSG--SLTVKEH 307
            N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q     SL V   
Sbjct: 182 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISLKVISA 241

Query: 308 THITDQPEDY---EVEAGQSATFRCNAVSDPSLKLS-----IVWLRGSEPIDFESEPRFV 359
               ++P  +   E  A +    R N +S   +        I W++  E     +   F 
Sbjct: 242 KSSKERPPTFLTPEGNASRKEELRGNVLSLECIAEGLPTPLIYWIK--EDGTLPANRTFY 299

Query: 360 QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
           ++   +L + + SE DSG Y C A+  L  I    ++TV+     + AP N  L
Sbjct: 300 RNFQKTLQIIQVSEADSGNYQCIAKNTLGIIRHTISVTVKAAPYWIMAPRNLVL 353


>gi|449275013|gb|EMC84019.1| Neuronal cell adhesion molecule [Columba livia]
          Length = 1308

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 162/528 (30%), Positives = 241/528 (45%), Gaps = 48/528 (9%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           +V LR   + L CI  G P P   W K+G  + P++R    N+ K+L I  V  +D G+Y
Sbjct: 280 KVELRGNVLLLECIAAGLPTPVIRWIKEGGEL-PANRTFFENFKKTLKIIDVSEADSGNY 338

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C   N +G A  + I ++V AAPY+   P  +  +  E  T  C+A+G P+P I W+ N
Sbjct: 339 KCIARNMLGSAH-HVISVTVKAAPYWITAPRNLVLSPGEDGTLICRANGNPKPNISWLAN 397

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           G PI+ AP +P RKV  + I   ++++  +  Y CNA+N  GY+  + +VNVLA  P I 
Sbjct: 398 GVPIAIAPEDPSRKVDGDTIIFSHVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRIL 457

Query: 223 EAPKDEYTVDGKT-VVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAF 279
                 Y V   +  +L C  FG+PKPE+ W    K   L G  Y   + G L+I     
Sbjct: 458 TTTNKLYQVIADSPALLDCAYFGSPKPEIEWFKGVKGSILRGNEYIFHDNGTLEIPVAQK 517

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
             +G YTC ARN+LG  Q    L VK+ T I  QPE   ++     +F C    D +L  
Sbjct: 518 DSTGTYTCVARNELGKIQNEVHLEVKDPTMIIKQPEYKVIQRYGQVSFECIIKHDSTLLP 577

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           +++WL+ ++ +    + RF+   D +LT+   ++ D G YTC   T LD + A A LTV 
Sbjct: 578 TVIWLKDNDAL--PDDERFLVGKD-NLTIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVV 634

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGS-IRELIVN 458
                P+      +I A+      NP     L G        +W   D   S I   ++ 
Sbjct: 635 AAPPTPA------IIYARP-----NPPFDLELTGQLERSVELSWIPGDENNSPITNFVIE 683

Query: 459 -----------------KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IIS 496
                             G  TT ++ K  P      RV+A N      PSE     +  
Sbjct: 684 YEDGLHEPGVWHYQTEVPGTQTTVQL-KLSPYVNYSFRVIAVNEIGRSQPSEPSEQYLTK 742

Query: 497 FVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQ 542
              P+  P  VQ + + P       + W  +K  Q NG  + YK+ ++
Sbjct: 743 SANPDENPSNVQGIGSEP---DNLVITWESLKGFQSNGPGLQYKVSWR 787



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 144/578 (24%), Positives = 229/578 (39%), Gaps = 86/578 (14%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRK---------SDTG 193
           +  EC A+GLP P I W+  G            ++  NR   EN +K         +D+G
Sbjct: 288 LLLECIAAGLPTPVIRWIKEGG-----------ELPANRTFFENFKKTLKIIDVSEADSG 336

Query: 194 NYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWI 253
           NY C A N LG  +  + V V A AP    AP++     G+   L CR  G PKP ++W+
Sbjct: 337 NYKCIARNMLGSAHHVISVTVKA-APYWITAPRNLVLSPGEDGTLICRANGNPKPNISWL 395

Query: 254 HNQKELTGGRYTILETGD---LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH- 309
            N   +           D   +  + V    S  Y C A N+ G    +  + V      
Sbjct: 396 ANGVPIAIAPEDPSRKVDGDTIIFSHVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPR 455

Query: 310 -ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
            +T   + Y+V A   A   C     P  K  I W +G +         ++  ++ +L +
Sbjct: 456 ILTTTNKLYQVIADSPALLDCAYFGSP--KPEIEWFKGVKGSILRGN-EYIFHDNGTLEI 512

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
             + +  +G YTC A+ EL  I+ +  L V+ P       T+I      K +  +  VS 
Sbjct: 513 PVAQKDSTGTYTCVARNELGKIQNEVHLEVKDP-------TMIIKQPEYKVIQRYGQVSF 565

Query: 429 QSLRGHFRGYKVQTWTEKDGEG--SIRELIVNKGESTTTEV-DK-------FVPASKNFA 478
           + +  H           KD +        +V K   T   V DK        V  + +  
Sbjct: 566 ECIIKHDSTLLPTVIWLKDNDALPDDERFLVGKDNLTIMNVTDKDDGTYTCIVNTTLDSV 625

Query: 479 RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
              A       PP+  I +  P         LE       +  L W+  ++ N  +  + 
Sbjct: 626 SASAVLTVVAAPPTPAIIYARP----NPPFDLELTGQLERSVELSWIPGDENNSPITNFV 681

Query: 539 IKYQS-------------VKGTKVGPLLERLPYISDPTTTSA-----KLAGLEPSTKYRI 580
           I+Y+              V GT+    L+  PY++      A     +    EPS +Y  
Sbjct: 682 IEYEDGLHEPGVWHYQTEVPGTQTTVQLKLSPYVNYSFRVIAVNEIGRSQPSEPSEQY-- 739

Query: 581 HLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
                TK+ +          P +NP NV+G GS P+NLVI+W ++   + N P  +Y++ 
Sbjct: 740 ----LTKSAN----------PDENPSNVQGIGSEPDNLVITWESLKGFQSNGPGLQYKVS 785

Query: 641 WRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           WR+ +  + W    V+    S+ +++  PTF PYEIKV
Sbjct: 786 WRQKDVDDEWTS--VIVANVSKYIVSGTPTFVPYEIKV 821



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 147/613 (23%), Positives = 248/613 (40%), Gaps = 79/613 (12%)

Query: 33   PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLI 90
            P+    T K    + +    L C + G+P P+  W K   G  +  ++ I   N   +L 
Sbjct: 454  PRILTTTNKLYQVIADSPALLDCAYFGSPKPEIEWFKGVKGSILRGNEYIFHDN--GTLE 511

Query: 91   IKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC--K 148
            I   +    G+YTC   N +G+ ++  + L V        +PE+        V+FEC  K
Sbjct: 512  IPVAQKDSTGTYTCVARNELGKIQN-EVHLEVKDPTMIIKQPEYKVIQRYGQVSFECIIK 570

Query: 149  ASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYK 208
                  P + W+ +   +   P + R  VG + +TI N+   D G Y C    +L  V  
Sbjct: 571  HDSTLLPTVIWLKDNDAL---PDDERFLVGKDNLTIMNVTDKDDGTYTCIVNTTLDSVSA 627

Query: 209  DVYVNVLAHAP-------------------------EITEAPKDEYTVDGKTVVLTCRVF 243
               + V+A  P                         E++  P DE        V+     
Sbjct: 628  SAVLTVVAAPPTPAIIYARPNPPFDLELTGQLERSVELSWIPGDENNSPITNFVIEYE-D 686

Query: 244  GAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGS---- 299
            G  +P V W H Q E+ G + T+     LK++      +  +   A N++G +Q S    
Sbjct: 687  GLHEPGV-W-HYQTEVPGTQTTV----QLKLSPYV---NYSFRVIAVNEIGRSQPSEPSE 737

Query: 300  ----GSLTVKEHTH----ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID 351
                 S    E+      I  +P++  +       F+ N    P L+  + W +     +
Sbjct: 738  QYLTKSANPDENPSNVQGIGSEPDNLVITWESLKGFQSNG---PGLQYKVSWRQKDVDDE 794

Query: 352  FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI----EAQATLTVQVPLEAPSN 407
            + S    + +N     V+ +      +   +A  +L +     E        +P+ AP N
Sbjct: 795  WTS---VIVANVSKYIVSGTPTFVPYEIKVQALNDLGYAPEPSEVIGHSGEDLPMVAPGN 851

Query: 408  FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW-----TEKDGEGSIRELIVNKGES 462
               + VI++  A V W+PV  +++RGH +GYKV  W     + +      ++++  +G  
Sbjct: 852  VQ-VHVINSTLAKVHWDPVPLKTVRGHLQGYKVYYWKVQSLSRRSRRHVEKKILTFRGNK 910

Query: 463  TTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYL 522
            T   +    P S     V   NG   GP S    F TPEGVP +   L+       +  L
Sbjct: 911  TFGMLPGLEPYSSYKLNVRVVNGKGEGPASPDKVFKTPEGVPSSPSFLKITNPTLDSLTL 970

Query: 523  KWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGLEPSTKYRI 580
            +W  P  PNG+L+ Y +K+Q +  T ++GPL+E R+P       +S  L  L  ST+Y+ 
Sbjct: 971  EWGSPTHPNGILISYILKFQPINNTHELGPLVEIRIP----ANESSMILKNLNYSTRYKF 1026

Query: 581  HLAGYTKAGDGAE 593
            +    T  G G++
Sbjct: 1027 YFNAQTSVGSGSQ 1039



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 149/616 (24%), Positives = 228/616 (37%), Gaps = 81/616 (13%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P   W  +GVPI     +PS ++     G ++I  HV+      Y C  S
Sbjct: 380 LICRANGNPKPNISWLANGVPIAIAPEDPSRKVD----GDTIIFSHVQERSSAVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T   +      +     +C   G P+PEI W   G  
Sbjct: 436 NEYGYLLANAF-VNVLAEPPRILTTTNKLYQVIADSPALLDCAYFGSPKPEIEWF-KGVK 493

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
            S    N         + I   +K  TG Y C A N LG +  +V++ V      I + P
Sbjct: 494 GSILRGNEYIFHDNGTLEIPVAQKDSTGTYTCVARNELGKIQNEVHLEV-KDPTMIIKQP 552

Query: 226 KDEYTVDGKTVVLTCRVF--GAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSG 283
           + +       V   C +       P V W+ +   L      ++   +L I +V   D G
Sbjct: 553 EYKVIQRYGQVSFECIIKHDSTLLPTVIWLKDNDALPDDERFLVGKDNLTIMNVTDKDDG 612

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVW 343
            YTC     L +   S  LTV     +   P    + A  +  F           + + W
Sbjct: 613 TYTCIVNTTLDSVSASAVLTV-----VAAPPTPAIIYARPNPPFDLELTGQLERSVELSW 667

Query: 344 LRGSE---PI-----------------DFESEPRFVQSN---------DYSLTVTKSSEL 374
           + G E   PI                  +++E    Q+          +YS  V   +E+
Sbjct: 668 IPGDENNSPITNFVIEYEDGLHEPGVWHYQTEVPGTQTTVQLKLSPYVNYSFRVIAVNEI 727

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
              Q    ++    ++   A      P E PSN   I   +    V++W  +      G 
Sbjct: 728 GRSQ---PSEPSEQYLTKSAN-----PDENPSNVQGIGS-EPDNLVITWESLKGFQSNGP 778

Query: 435 FRGYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNG-AYNGPPS 492
              YKV +W +KD +     +IV N  +   +    FVP      +V A N   Y   PS
Sbjct: 779 GLQYKV-SWRQKDVDDEWTSVIVANVSKYIVSGTPTFVPYE---IKVQALNDLGYAPEPS 834

Query: 493 EIISFV---TPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT 547
           E+I       P   PG VQ      + S+   + W  V  +   G L GYK+ Y  V+  
Sbjct: 835 EVIGHSGEDLPMVAPGNVQ---VHVINSTLAKVHWDPVPLKTVRGHLQGYKVYYWKVQSL 891

Query: 548 --KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
             +    +E+         T   L GLEP + Y++++      G+G  S       FK P
Sbjct: 892 SRRSRRHVEKKILTFRGNKTFGMLPGLEPYSSYKLNVRVVNGKGEGPASPDKV---FKTP 948

Query: 606 DNVEGRGSTPNNLVIS 621
              EG  S+P+ L I+
Sbjct: 949 ---EGVPSSPSFLKIT 961



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 122/311 (39%), Gaps = 41/311 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS---QAPPNPRRKVGPNRITIENLRKSDT--GNY 195
           E +  +C+A G P P   W  NG        A    +   G   I I N  K++   G Y
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDAQVTMKPNSGTLVINIMNGGKAEAYEGVY 121

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEIT-EAPKDEYTVDGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +  V   + +P  T E  +  +  +G ++VL CR   G P P + W+
Sbjct: 122 QCTARNERGAAISNNIVIRPSRSPLWTKERLEPNHVREGDSLVLHCRPPVGLPPPIIFWM 181

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVKEHTH 309
            N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK  + 
Sbjct: 182 DNAFQRLPQSERVSQGLNGDLYFSNVQPEDTREDYICYARFNHTQTIQQKQPISVKVFSM 241

Query: 310 ------ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI-VWLRGS--------------- 347
                 I     D ++   +  T R   +  P+   S  V LRG+               
Sbjct: 242 DSLNDTIAANLSDTDIYGAKPVTERQPVLLTPTGSTSTKVELRGNVLLLECIAAGLPTPV 301

Query: 348 -----EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP- 401
                E  +  +   F ++   +L +   SE DSG Y C A+  L       ++TV+   
Sbjct: 302 IRWIKEGGELPANRTFFENFKKTLKIIDVSEADSGNYKCIARNMLGSAHHVISVTVKAAP 361

Query: 402 --LEAPSNFTL 410
             + AP N  L
Sbjct: 362 YWITAPRNLVL 372


>gi|348568087|ref|XP_003469830.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Cavia
           porcellus]
          Length = 1304

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/400 (34%), Positives = 199/400 (49%), Gaps = 21/400 (5%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           +RK+E  LR   + L CI  G P P   W K+   + P++R    N+ K+L I  V  +D
Sbjct: 278 SRKEE--LRGNVLSLECIAEGLPTPLIYWIKEDGTL-PANRTFYRNFQKTLQIIQVSEAD 334

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G+Y C   N +G  + ++I ++V AAPY+ + P  +  +  E  T  C+A+G P+P I 
Sbjct: 335 SGNYQCIAKNTLGIIR-HTISVTVKAAPYWIMAPRNLVLSPGEDGTLICRANGNPKPRIS 393

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG P   AP +P R++  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  
Sbjct: 394 WLTNGVPTEIAPDDPSRRIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEL 453

Query: 219 PEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKIT 275
           P I       Y V   +   L C  FG+P P + W    K   L    Y I E G L+I 
Sbjct: 454 PRILTPANTLYQVIANRPAFLDCAFFGSPLPTIEWFKGAKGSALHEDIYVIHENGTLEIP 513

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
                +SG YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D 
Sbjct: 514 VAQKDNSGTYTCVARNKLGVAKNEVHLEIKDPTRILKQPEYAVVQRGGRVSFECKVKHDH 573

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
           +L  ++ WL+ +   +  ++ RF    D+ L VT   + D G YTC A T LD + A A 
Sbjct: 574 TLIATVTWLKDNG--ELPNDERFTVDKDH-LVVTDVRDSDGGIYTCVANTTLDEVSASAV 630

Query: 396 LTVQVPLEAPS----------NFTLIQVIDAKKAVVSWNP 425
           L+V  P   P+          +  L   +D K   +SW P
Sbjct: 631 LSVVAPTPTPAPIYDVPSPPFDLELTDQLD-KSVQLSWTP 669



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 144/561 (25%), Positives = 233/561 (41%), Gaps = 52/561 (9%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W+   K     P N  R    N    + I  + ++D+GNY C A
Sbjct: 288 LSLECIAEGLPTPLIYWI---KEDGTLPAN--RTFYRNFQKTLQIIQVSEADSGNYQCIA 342

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QK 257
            N+LG +   + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 343 KNTLGIIRHTISVTVKA-APYWIMAPRNLVLSPGEDGTLICRANGNPKPRISWLTNGVPT 401

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N+ G    +  + V         P +
Sbjct: 402 EIAPDDPSRRIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAELPRILTPAN 461

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      +   +  N  +L +  + + 
Sbjct: 462 TLYQVIANRPAFLDCAFFGSP--LPTIEWFKGAKGSALHEDIYVIHENG-TLEIPVAQKD 518

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
           +SG YTC A+ +L   + +  L ++ P   L+ P  + ++Q    +   VS+       +
Sbjct: 519 NSGTYTCVARNKLGVAKNEVHLEIKDPTRILKQPE-YAVVQ----RGGRVSFE----CKV 569

Query: 432 RGHFRGYKVQTWTEKDGEGSIRE-LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGP 490
           +         TW + +GE    E   V+K     T+V     +       +A        
Sbjct: 570 KHDHTLIATVTWLKDNGELPNDERFTVDKDHLVVTDVRD---SDGGIYTCVANTTLDEVS 626

Query: 491 PSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIKYQS 543
            S ++S V P   P  +  + + P           +  L W   +  N  +  + I+Y+ 
Sbjct: 627 ASAVLSVVAPTPTPAPIYDVPSPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYED 686

Query: 544 VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFY 599
                   L      +S  T T+A+L  L P   Y   +      G      A  +Y   
Sbjct: 687 --AMHEAGLWHHQAEVSG-TQTTAQLK-LSPYVNYSFRVMAENSIGRSLPSEASEQYQTK 742

Query: 600 V--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLD 657
              P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W    V+ 
Sbjct: 743 AAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS--VVV 800

Query: 658 WRQSELVLANQPTFQPYEIKV 678
              S+ +++  PTF PY IKV
Sbjct: 801 ANVSKYIVSGTPTFVPYLIKV 821



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 139/595 (23%), Positives = 243/595 (40%), Gaps = 69/595 (11%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
            + N+   L C F G+PLP   W K        + I   +   +L I   +  + G+YTC 
Sbjct: 467  IANRPAFLDCAFFGSPLPTIEWFKGAKGSALHEDIYVIHENGTLEIPVAQKDNSGTYTCV 526

Query: 106  VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPE--PEIHWVHNG 163
              N +G AK+  + L +        +PE+        V+FECK          + W+ + 
Sbjct: 527  ARNKLGVAKN-EVHLEIKDPTRILKQPEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDN 585

Query: 164  KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP---- 219
                + P + R  V  + + + ++R SD G Y C A  +L  V     ++V+A  P    
Sbjct: 586  ---GELPNDERFTVDKDHLVVTDVRDSDGGIYTCVANTTLDEVSASAVLSVVAPTPTPAP 642

Query: 220  --EITEAPKDEYTVD--GKTVVLT--------------CRVFGAPKPEVNWIHNQKELTG 261
              ++   P D    D   K+V L+                 +     E    H+Q E++G
Sbjct: 643  IYDVPSPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQAEVSG 702

Query: 262  GRYTILETGDLKITDVAFADSGEYTCFARNKLGTA---------QGSGSLTVKEHTHIT- 311
             +     T  LK++      +  +   A N +G +         Q   +   K  T +  
Sbjct: 703  TQ----TTAQLKLSPYV---NYSFRVMAENSIGRSLPSEASEQYQTKAAEPDKNPTAVEG 755

Query: 312  --DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
               +P++  +       F  N    P L+  + W +     ++ S    V +N     V+
Sbjct: 756  LGSEPDNLVITWKPLNGFESNG---PGLQYKVSWRQKDGDDEWTS---VVVANVSKYIVS 809

Query: 370  KSSELDSGQYTCRAQTELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVSWNP 425
             +          +A   + F    A +T      +P+ AP N   + V+++  A V W+P
Sbjct: 810  GTPTFVPYLIKVQALNVMGFAPEPAVVTGHSGEDLPMVAPGNVR-VNVVNSTLAEVHWDP 868

Query: 426  VSPQSLRGHFRGYKVQTW-----TEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
            V  +S+RG  +GY++  W     ++++     ++++  +G  T   +    P S     V
Sbjct: 869  VPLKSIRGRLQGYRIYYWKAQSASQRNRRHLEKKILTFQGSKTHGMLPGLEPFSHYALNV 928

Query: 481  LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
               NG   GP S   +F TPEGVP    SL+ +     +  L+W  P +PNG+L  Y +K
Sbjct: 929  RVVNGKGEGPASPDRAFSTPEGVPSAPSSLKIVNPTLDSLTLEWDPPSRPNGILTEYTLK 988

Query: 541  YQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
            YQ +  T ++GPL++ ++P       T   L  L  ST+Y+ +    T  G G++
Sbjct: 989  YQPINSTHELGPLIDLKIPA----NKTRWTLKNLNFSTRYKFYFYAQTSVGPGSQ 1039



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 136/605 (22%), Positives = 223/605 (36%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVP      +PS RI     G ++I  +V+      Y C  S
Sbjct: 380 LICRANGNPKPRISWLTNGVPTEIAPDDPSRRID----GDTIIFSNVQERSSAVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA     + P               +C   G P P I W    K 
Sbjct: 436 NEYGYLLANAF-VNVLAELPRILTPANTLYQVIANRPAFLDCAFFGSPLPTIEWFKGAK- 493

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K ++G Y C A N LG    +V++ +      I + 
Sbjct: 494 -GSALHEDIYVIHENGTLEIPVAQKDNSGTYTCVARNKLGVAKNEVHLEI-KDPTRILKQ 551

Query: 225 PKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ +  EL       ++   L +TDV  +D 
Sbjct: 552 PEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDNGELPNDERFTVDKDHLVVTDVRDSDG 611

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L     S  L+V     +   P    +    S  F           + + 
Sbjct: 612 GIYTCVANTTLDEVSASAVLSV-----VAPTPTPAPIYDVPSPPFDLELTDQLDKSVQLS 666

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    ++  +      S    + Q          F + A+ +
Sbjct: 667 WTPGDDNNSPITKFIIEYEDAMHEAGLWHHQAEVSGTQTTAQLKLSPYVNYSFRVMAENS 726

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 727 IGRSLPSEASEQYQTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 785

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   +++  + E
Sbjct: 786 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNVMGFAPEPAVVTGHSGE 842

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   +    +    LE+ 
Sbjct: 843 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGRLQGYRIYYWKAQSASQRNRRHLEKK 902

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A     F  P       EG  S P
Sbjct: 903 ILTFQGSKTHGMLPGLEPFSHYALNVRVVNGKGEGPASPDRAFSTP-------EGVPSAP 955

Query: 616 NNLVI 620
           ++L I
Sbjct: 956 SSLKI 960



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 125/313 (39%), Gaps = 45/313 (14%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   + I  +   K++T  G Y
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGSGTLIINIMSEGKAETYEGVY 121

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +  V   + +P  T+   +  T+ +G+ +VL CR   G P   + W+
Sbjct: 122 QCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQNGQPLVLPCRPPIGLPPAIIFWM 181

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVKE--- 306
            N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    +++K    
Sbjct: 182 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISLKVISV 241

Query: 307 ---HTHITDQPEDYEVEAGQSATFR--------CNAVSDPSLKLSIV------------- 342
              +  I     D E    +S+  R         NA     L+ +++             
Sbjct: 242 DELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNASRKEELRGNVLSLECIAEGLPTPL 301

Query: 343 --WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
             W++  E     +   F ++   +L + + SE DSG Y C A+  L  I    ++TV+ 
Sbjct: 302 IYWIK--EDGTLPANRTFYRNFQKTLQIIQVSEADSGNYQCIAKNTLGIIRHTISVTVKA 359

Query: 401 P---LEAPSNFTL 410
               + AP N  L
Sbjct: 360 APYWIMAPRNLVL 372


>gi|125813087|ref|XP_686686.2| PREDICTED: protein sidekick-1 [Danio rerio]
          Length = 2126

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 191/666 (28%), Positives = 287/666 (43%), Gaps = 61/666 (9%)

Query: 8   EYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT-- 65
           E K    I LNV  +   A  +  AP      R   V     +  L C+    P+ +   
Sbjct: 181 ENKTSPSIYLNVADS--EAPADPVAPVIVIPPRNTTVVAGISEATLECVANARPVEKLSL 238

Query: 66  IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV-----SNGVGEAKSYSIDL 120
           +W ++GV +        G++ + L I +   +D G Y CE      S    EA+++   L
Sbjct: 239 VWRRNGVEVASG----VGSFSRRLTIINPTSTDVGMYVCEALLLDSSVKPAEARAF---L 291

Query: 121 SVLAAPYFTVEPEFINAAE-EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGP 179
           S+  APYFT EP      E E++V  +C+A G+P P++ W  +  P+S+   NPR K+  
Sbjct: 292 SITEAPYFTAEPRRKMMGEVEKSVDIQCQARGVPMPKLEWYKDAVPLSKLN-NPRYKIIS 350

Query: 180 NR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVL 238
           +  + +  L+ SD G + C A NS G      Y++V + AP  T  P D    DG     
Sbjct: 351 SMGLQVRKLQPSDAGIFQCFARNSAGEAQVHTYLDVTSMAPAFTAPPLDITVTDGAVAAF 410

Query: 239 TCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDVAFADSGEYTCFARNKL 293
           TCRV GAPKP + W  + + L  G     R+T+LE+G L+I  V   D+G YTC+A N  
Sbjct: 411 TCRVSGAPKPAIVWRRDTQILASGSVQIPRFTLLESGGLQIQPVVLQDTGNYTCYAANSE 470

Query: 294 GTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFE 353
           G    S SLTV   T I+  P D  V  G +A   C A  DP + +  VW +  E +   
Sbjct: 471 GAINASASLTVWSRTSISSPPTDRRVIKGTTAILECGATHDPRVGVRYVWKKDEELVSHS 530

Query: 354 SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTL-IQ 412
              R +   + SL ++++   D G YTC   +E      +A L V     +P N    + 
Sbjct: 531 RGGR-ISLQEGSLHISQTWSGDIGNYTCDVISEAGNESKEARLEVIELPHSPRNLQASLN 589

Query: 413 VIDAKKAVVSW-NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFV 471
             D++   +SW  P    S   H+    V   +E +    +    V+    T   V    
Sbjct: 590 ANDSRSVDLSWMRPFDGNSPLLHY----VVELSENNSPWRVYLSDVDPS-GTGAMVKGLT 644

Query: 472 PASKNFARVLAFN----GAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKP 527
           PA     RV A N    G Y+   + ++    P   P   +++ A    + +  ++W  P
Sbjct: 645 PARSYQFRVCAVNQVGRGQYSTETNRLMLREEPPSAPP--KNIVASGRTNQSIMVQWQPP 702

Query: 528 EQP--NGVLMGYKIKYQSVKGTKVGPLLERLP------YISDPTTTSAKLAGLEPSTKYR 579
            +P  NGVL GY ++Y+          L  LP       IS P      +  L   T+Y 
Sbjct: 703 PEPQLNGVLRGYVLRYR----------LAGLPGEYQQKNISSPEINYCLITELIIWTQYE 752

Query: 580 IHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPH 634
           I +A YT AG G  S+      L  VP   P  VE +      +  SW   P+   N  +
Sbjct: 753 IQVAAYTGAGLGVFSQPVTEYTLQGVPTAPPQGVEAKAVNSTTIEFSWNPPPQQFINGIN 812

Query: 635 FKYRIF 640
             Y++ 
Sbjct: 813 QGYKLM 818



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 170/698 (24%), Positives = 268/698 (38%), Gaps = 104/698 (14%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           +++ VT+ +   L +  V  F      P PQ  W +DG  I PS+RI+       L++  
Sbjct: 109 QRKTVTQGRAAILNSPAVSCF------PRPQVTWFRDGYKIIPSNRIAI-TLENQLVVLG 161

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSVL--AAPYFTVEPEFINAAEEETV------ 143
              SD G Y  + V+   GE K S SI L+V    AP   V P  +      TV      
Sbjct: 162 TAASDAGRYYVQAVNEKNGENKTSPSIYLNVADSEAPADPVAPVIVIPPRNTTVVAGISE 221

Query: 144 -TFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
            T EC A+  P  ++   W  NG  ++    +  R     R+TI N   +D G Y C A 
Sbjct: 222 ATLECVANARPVEKLSLVWRRNGVEVASGVGSFSR-----RLTIINPTSTDVGMYVCEAL 276

Query: 201 ---NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ 256
              +S+       ++++   AP  T  P+ +   +  K+V + C+  G P P++ W  + 
Sbjct: 277 LLDSSVKPAEARAFLSI-TEAPYFTAEPRRKMMGEVEKSVDIQCQARGVPMPKLEWYKDA 335

Query: 257 ---KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITD 312
               +L   RY I+ +  L++  +  +D+G + CFARN  G AQ    L V       T 
Sbjct: 336 VPLSKLNNPRYKIISSMGLQVRKLQPSDAGIFQCFARNSAGEAQVHTYLDVTSMAPAFTA 395

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTK 370
            P D  V  G  A F C     P  K +IVW R ++ +   S   PRF       L +  
Sbjct: 396 PPLDITVTDGAVAAFTCRVSGAP--KPAIVWRRDTQILASGSVQIPRFTLLESGGLQIQP 453

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPV---- 426
               D+G YTC A      I A A+LTV       S  T  +VI    A++         
Sbjct: 454 VVLQDTGNYTCYAANSEGAINASASLTVWSRTSISSPPTDRRVIKGTTAILECGATHDPR 513

Query: 427 --------SPQSLRGHFRGYKV----------QTWTEKDGEGSIREL--IVNKGESTTTE 466
                     + L  H RG ++          QTW+   G  +   +    N+ +    E
Sbjct: 514 VGVRYVWKKDEELVSHSRGGRISLQEGSLHISQTWSGDIGNYTCDVISEAGNESKEARLE 573

Query: 467 VDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVK 526
           V +   + +N    L  N                                S +  L W++
Sbjct: 574 VIELPHSPRNLQASLNAN-------------------------------DSRSVDLSWMR 602

Query: 527 PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYT 586
           P   N  L+ Y ++          P    L  + DP+ T A + GL P+  Y+  +    
Sbjct: 603 PFDGNSPLLHYVVELSE----NNSPWRVYLSDV-DPSGTGAMVKGLTPARSYQFRVCAVN 657

Query: 587 KAGDG---AESKYLFYV---PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
           + G G    E+  L      P   P N+   G T  ++++ W   PE + N     Y + 
Sbjct: 658 QVGRGQYSTETNRLMLREEPPSAPPKNIVASGRTNQSIMVQWQPPPEPQLNGVLRGYVLR 717

Query: 641 WRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           +R       + Q ++     +  ++     +  YEI+V
Sbjct: 718 YRLAGLPGEYQQKNISSPEINYCLITELIIWTQYEIQV 755



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 149/632 (23%), Positives = 240/632 (37%), Gaps = 64/632 (10%)

Query: 43   EVALRNKKVELF-CIFGGTPLPQTIWSKDG-VPINPSDRISQGNYGKS--LIIKHVEFSD 98
            ++ + +  V  F C   G P P  +W +D  +  + S +I +    +S  L I+ V   D
Sbjct: 399  DITVTDGAVAAFTCRVSGAPKPAIVWRRDTQILASGSVQIPRFTLLESGGLQIQPVVLQD 458

Query: 99   QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
             G+YTC  +N  G A + S  L+V +    +  P      +  T   EC A+  P   + 
Sbjct: 459  TGNYTCYAANSEG-AINASASLTVWSRTSISSPPTDRRVIKGTTAILECGATHDPRVGVR 517

Query: 159  --WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
              W  + + +S +    R  +    + I      D GNY C+  +  G   K+  + V  
Sbjct: 518  YVWKKDEELVSHSRGG-RISLQEGSLHISQTWSGDIGNYTCDVISEAGNESKEARLEVIE 576

Query: 215  LAHAPEITEAPKDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTILETGD-- 271
            L H+P   +A  +    D ++V L+  R F    P ++++    E        L   D  
Sbjct: 577  LPHSPRNLQASLNAN--DSRSVDLSWMRPFDGNSPLLHYVVELSENNSPWRVYLSDVDPS 634

Query: 272  ---LKITDVAFADSGEYTCFARNKLGTAQGS---GSLTVKEHTHITDQPEDYEVEAG--- 322
                 +  +  A S ++   A N++G  Q S     L ++E       P    V +G   
Sbjct: 635  GTGAMVKGLTPARSYQFRVCAVNQVGRGQYSTETNRLMLREEP--PSAPPKNIVASGRTN 692

Query: 323  QSATFRCNAVSDPSL---------KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            QS   +     +P L         +  +  L G       S P         L +    E
Sbjct: 693  QSIMVQWQPPPEPQLNGVLRGYVLRYRLAGLPGEYQQKNISSPEINYCLITELIIWTQYE 752

Query: 374  LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRG 433
            +    YT        F +     T+Q    AP      + +++     SWNP   Q + G
Sbjct: 753  IQVAAYTGAGLGV--FSQPVTEYTLQGVPTAPPQGVEAKAVNSTTIEFSWNPPPQQFING 810

Query: 434  HFRGYKVQTWTEKDGEGSIRELIVNKGEST-----TTEVDKFVPASKNFARVLAFNGAYN 488
              +GYK+  W E+  E  I   I      T      + + KF   S     VL F    N
Sbjct: 811  INQGYKLMAWPERSPEEVIVVTITPDYHGTRHLGYISGLRKF---SWYLTSVLCFTTPGN 867

Query: 489  GPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTK 548
            GP S      T E +PG V  L    +  ++  + W +P   NG++ GY + ++ V+G  
Sbjct: 868  GPRSPPKLVQTFEDIPGPVGRLSFTEILDTSLKVSWEEPVDKNGIITGYLVSWE-VQGNN 926

Query: 549  VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY--VPFKNPD 606
               +   L      TT   K+ GL   T Y + +A  T+AG G  +       VP + P 
Sbjct: 927  QSRVARNLAN----TTLDYKVTGLTSLTTYTLEVAAMTEAGVGTVTSSTISSGVPPELP- 981

Query: 607  NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
                    P+NLVIS     +I   +   K+R
Sbjct: 982  ------GPPSNLVIS-----KISSRSATLKFR 1002



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 2/142 (1%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP N   I  + + +  V W P   ++  G  +GYK+  W E D +     + +   
Sbjct: 1610 PSVAPQNIQ-INTLSSTQLEVQWEPPPAETQNGIIQGYKILYW-EMDSQNETERVKILFR 1667

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
              T   +      +    ++LAFN A +GP SE     T +  P     +    + SS  
Sbjct: 1668 PETNMRLKNLTSYTYYMVKLLAFNAAGDGPFSEPRRGRTLQAAPSAPSFISFSEVTSSTL 1727

Query: 521  YLKWVKPEQPNGVLMGYKIKYQ 542
             + W  P  PNGV+ GY++ Y+
Sbjct: 1728 NVSWGFPLSPNGVVEGYRVVYE 1749



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 13/200 (6%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N T  + + + + +V+W PV      G+  GYKV  + EKD +   +  +V  
Sbjct: 1186 VPSGAPENVT-AEAMSSSRILVTWGPVPEHEQNGNILGYKV-LFKEKDSDSEAQVNVVKG 1243

Query: 460  GESTTTEVDKFVPASKNFARVLAF----NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPL 515
              + +  +       +   +VLAF    +G  + PP   +   T + VPG    L    +
Sbjct: 1244 NLTQSVLLRNLRKYVQYEIQVLAFTRIGDGQLSNPP---VLERTKDDVPGPPMRLVFPEV 1300

Query: 516  GSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
              +   + W  P  PNG++MGY++ Y+   G       + +     P T     + L P 
Sbjct: 1301 RLTEVRVVWQPPVDPNGIIMGYQVAYRLDSGDPN----QFITIEVGPDTRQFTASSLTPE 1356

Query: 576  TKYRIHLAGYTKAGDGAESK 595
            + Y   ++  T+ G G+ ++
Sbjct: 1357 SAYIFRISAKTEQGWGSPAQ 1376



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 105/249 (42%), Gaps = 25/249 (10%)

Query: 458  NKGESTTTEVDKFVPASKNFARVLAFNGAYNGP-----PSEIISFVT--PEGVPGTVQSL 510
            N  E+   EV    P +    R+   N    GP     PS +I  +   P+  P +V   
Sbjct: 1037 NDPEAQMLEVPNLTPFTHYRFRMRQVNIV--GPSAVSVPSRVIQTLQAPPDVAPSSVTVR 1094

Query: 511  EAIPLGSSAFYLKWVK-PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
             A     ++ +L+WV  PE     N   +GY+++   ++    G    RL  ++D     
Sbjct: 1095 TA---SETSLWLRWVPLPESEYNGNPESVGYRVRV--MRADLRGEASTRL--LNDRLERE 1147

Query: 567  AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVIS 621
              L GLE  T+Y++ +  +   G G  S+ +       VP   P+NV     + + ++++
Sbjct: 1148 ITLEGLEEWTEYQLQIQAFNSIGPGPWSESVKGRTRESVPSGAPENVTAEAMSSSRILVT 1207

Query: 622  WTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQT 681
            W  +PE E N     Y++ ++  ++      + V       ++L N   +  YEI+V+  
Sbjct: 1208 WGPVPEHEQNGNILGYKVLFKEKDSDSEAQVNVVKGNLTQSVLLRNLRKYVQYEIQVLAF 1267

Query: 682  WTEKDGEGS 690
                DG+ S
Sbjct: 1268 TRIGDGQLS 1276



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 62/300 (20%), Positives = 124/300 (41%), Gaps = 30/300 (10%)

Query: 414  IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPA 473
            + ++K +++W P    S     R + +QT     GE       ++   S+  EVD+  P 
Sbjct: 1401 VQSRKLLLNWVPGGDGS--SPVRYFTLQTQELPSGEWITHSSAISHNYSSW-EVDRLKPF 1457

Query: 474  SKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGTVQSLEAI-PLGSSAFYLKWVKP--EQ 529
            +    R++A N   +   S E  +  T + VP     ++++ P  +++  ++W  P  E 
Sbjct: 1458 TSYKLRMMATNDVGDSKYSQETDAITTLQDVPDEAPMIQSVKPSTTTSVLVQWQTPKEES 1517

Query: 530  PNGVLMGYKIKYQSVKGTKVGPLLERLPY-----------------ISDPTTTSAKLAGL 572
             NGVL+GY++ Y+ ++     P   + P                  +S+P+ T  +L  L
Sbjct: 1518 VNGVLVGYRLYYRELQYDST-PQDSKRPVNSSQLRTELTAKSTVKTVSNPSLTEFELTQL 1576

Query: 573  EPSTKYRIHLAGYTKAGDGAESKYL-FYV----PFKNPDNVEGRGSTPNNLVISWTAMPE 627
            +   +Y I +  Y   G+   S  +  +V    P   P N++    +   L + W   P 
Sbjct: 1577 QKYRRYEIVMTAYNVIGESPPSAPVEVFVGEAAPSVAPQNIQINTLSSTQLEVQWEPPPA 1636

Query: 628  IEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDG 687
               N     Y+I +   ++     +  +L   ++ + L N  ++  Y +K++      DG
Sbjct: 1637 ETQNGIIQGYKILYWEMDSQNETERVKILFRPETNMRLKNLTSYTYYMVKLLAFNAAGDG 1696



 Score = 43.1 bits (100), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 108/271 (39%), Gaps = 38/271 (14%)

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG----RYTILETGDLKITDV 277
           TE    E  ++G  +V+TC   G+   E  W+ N  ++T      +YT        I+ +
Sbjct: 19  TEPGPPEIHLEGNRLVMTCLAEGSWPLEFKWMLNNTDITAFSPEYKYT--------ISSL 70

Query: 278 AFADSGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
             ++ G Y C  RN++G   Q    + V       D  +   V  G++A     AVS   
Sbjct: 71  QRSNMGVYQCVVRNRMGALLQKKAEIQVAYMGDFIDNDQRKTVTQGRAAILNSPAVSC-F 129

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE---------- 386
            +  + W R    I   +  R   + +  L V  ++  D+G+Y  +A  E          
Sbjct: 130 PRPQVTWFRDGYKIIPSN--RIAITLENQLVVLGTAASDAGRYYVQAVNEKNGENKTSPS 187

Query: 387 --LDFIEAQATLTVQVPLEA--PSNFTLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKV 440
             L+  +++A      P+    P N T++  I     + V +  PV   SL     G +V
Sbjct: 188 IYLNVADSEAPADPVAPVIVIPPRNTTVVAGISEATLECVANARPVEKLSLVWRRNGVEV 247

Query: 441 QTWTEKDGEGSIRELIVNKGESTTTEVDKFV 471
            +     G  S R  I+N    T+T+V  +V
Sbjct: 248 ASGV---GSFSRRLTIINP---TSTDVGMYV 272


>gi|348568089|ref|XP_003469831.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Cavia
           porcellus]
          Length = 1256

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/400 (34%), Positives = 199/400 (49%), Gaps = 21/400 (5%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           +RK+E  LR   + L CI  G P P   W K+   + P++R    N+ K+L I  V  +D
Sbjct: 272 SRKEE--LRGNVLSLECIAEGLPTPLIYWIKEDGTL-PANRTFYRNFQKTLQIIQVSEAD 328

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G+Y C   N +G  + ++I ++V AAPY+ + P  +  +  E  T  C+A+G P+P I 
Sbjct: 329 SGNYQCIAKNTLGIIR-HTISVTVKAAPYWIMAPRNLVLSPGEDGTLICRANGNPKPRIS 387

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG P   AP +P R++  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  
Sbjct: 388 WLTNGVPTEIAPDDPSRRIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEL 447

Query: 219 PEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKIT 275
           P I       Y V   +   L C  FG+P P + W    K   L    Y I E G L+I 
Sbjct: 448 PRILTPANTLYQVIANRPAFLDCAFFGSPLPTIEWFKGAKGSALHEDIYVIHENGTLEIP 507

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
                +SG YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D 
Sbjct: 508 VAQKDNSGTYTCVARNKLGVAKNEVHLEIKDPTRILKQPEYAVVQRGGRVSFECKVKHDH 567

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
           +L  ++ WL+ +   +  ++ RF    D+ L VT   + D G YTC A T LD + A A 
Sbjct: 568 TLIATVTWLKDNG--ELPNDERFTVDKDH-LVVTDVRDSDGGIYTCVANTTLDEVSASAV 624

Query: 396 LTVQVPLEAPS----------NFTLIQVIDAKKAVVSWNP 425
           L+V  P   P+          +  L   +D K   +SW P
Sbjct: 625 LSVVAPTPTPAPIYDVPSPPFDLELTDQLD-KSVQLSWTP 663



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 144/561 (25%), Positives = 233/561 (41%), Gaps = 52/561 (9%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
           ++ EC A GLP P I+W+   K     P N  R    N    + I  + ++D+GNY C A
Sbjct: 282 LSLECIAEGLPTPLIYWI---KEDGTLPAN--RTFYRNFQKTLQIIQVSEADSGNYQCIA 336

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QK 257
            N+LG +   + V V A AP    AP++     G+   L CR  G PKP ++W+ N    
Sbjct: 337 KNTLGIIRHTISVTVKA-APYWIMAPRNLVLSPGEDGTLICRANGNPKPRISWLTNGVPT 395

Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           E+     +    GD  I ++V    S  Y C A N+ G    +  + V         P +
Sbjct: 396 EIAPDDPSRRIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAELPRILTPAN 455

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y+V A + A   C     P    +I W +G++      +   +  N  +L +  + + 
Sbjct: 456 TLYQVIANRPAFLDCAFFGSP--LPTIEWFKGAKGSALHEDIYVIHENG-TLEIPVAQKD 512

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
           +SG YTC A+ +L   + +  L ++ P   L+ P  + ++Q    +   VS+       +
Sbjct: 513 NSGTYTCVARNKLGVAKNEVHLEIKDPTRILKQPE-YAVVQ----RGGRVSFE----CKV 563

Query: 432 RGHFRGYKVQTWTEKDGEGSIRE-LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGP 490
           +         TW + +GE    E   V+K     T+V     +       +A        
Sbjct: 564 KHDHTLIATVTWLKDNGELPNDERFTVDKDHLVVTDVRD---SDGGIYTCVANTTLDEVS 620

Query: 491 PSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIKYQS 543
            S ++S V P   P  +  + + P           +  L W   +  N  +  + I+Y+ 
Sbjct: 621 ASAVLSVVAPTPTPAPIYDVPSPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYED 680

Query: 544 VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFY 599
                   L      +S  T T+A+L  L P   Y   +      G      A  +Y   
Sbjct: 681 --AMHEAGLWHHQAEVSG-TQTTAQLK-LSPYVNYSFRVMAENSIGRSLPSEASEQYQTK 736

Query: 600 V--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLD 657
              P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +  + W    V+ 
Sbjct: 737 AAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS--VVV 794

Query: 658 WRQSELVLANQPTFQPYEIKV 678
              S+ +++  PTF PY IKV
Sbjct: 795 ANVSKYIVSGTPTFVPYLIKV 815



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 139/595 (23%), Positives = 243/595 (40%), Gaps = 69/595 (11%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
            + N+   L C F G+PLP   W K        + I   +   +L I   +  + G+YTC 
Sbjct: 461  IANRPAFLDCAFFGSPLPTIEWFKGAKGSALHEDIYVIHENGTLEIPVAQKDNSGTYTCV 520

Query: 106  VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPE--PEIHWVHNG 163
              N +G AK+  + L +        +PE+        V+FECK          + W+ + 
Sbjct: 521  ARNKLGVAKN-EVHLEIKDPTRILKQPEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDN 579

Query: 164  KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP---- 219
                + P + R  V  + + + ++R SD G Y C A  +L  V     ++V+A  P    
Sbjct: 580  ---GELPNDERFTVDKDHLVVTDVRDSDGGIYTCVANTTLDEVSASAVLSVVAPTPTPAP 636

Query: 220  --EITEAPKDEYTVD--GKTVVLT--------------CRVFGAPKPEVNWIHNQKELTG 261
              ++   P D    D   K+V L+                 +     E    H+Q E++G
Sbjct: 637  IYDVPSPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQAEVSG 696

Query: 262  GRYTILETGDLKITDVAFADSGEYTCFARNKLGTA---------QGSGSLTVKEHTHIT- 311
             +     T  LK++      +  +   A N +G +         Q   +   K  T +  
Sbjct: 697  TQ----TTAQLKLSPYV---NYSFRVMAENSIGRSLPSEASEQYQTKAAEPDKNPTAVEG 749

Query: 312  --DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
               +P++  +       F  N    P L+  + W +     ++ S    V +N     V+
Sbjct: 750  LGSEPDNLVITWKPLNGFESNG---PGLQYKVSWRQKDGDDEWTS---VVVANVSKYIVS 803

Query: 370  KSSELDSGQYTCRAQTELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVSWNP 425
             +          +A   + F    A +T      +P+ AP N   + V+++  A V W+P
Sbjct: 804  GTPTFVPYLIKVQALNVMGFAPEPAVVTGHSGEDLPMVAPGNVR-VNVVNSTLAEVHWDP 862

Query: 426  VSPQSLRGHFRGYKVQTW-----TEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
            V  +S+RG  +GY++  W     ++++     ++++  +G  T   +    P S     V
Sbjct: 863  VPLKSIRGRLQGYRIYYWKAQSASQRNRRHLEKKILTFQGSKTHGMLPGLEPFSHYALNV 922

Query: 481  LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
               NG   GP S   +F TPEGVP    SL+ +     +  L+W  P +PNG+L  Y +K
Sbjct: 923  RVVNGKGEGPASPDRAFSTPEGVPSAPSSLKIVNPTLDSLTLEWDPPSRPNGILTEYTLK 982

Query: 541  YQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
            YQ +  T ++GPL++ ++P       T   L  L  ST+Y+ +    T  G G++
Sbjct: 983  YQPINSTHELGPLIDLKIPA----NKTRWTLKNLNFSTRYKFYFYAQTSVGPGSQ 1033



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 136/605 (22%), Positives = 223/605 (36%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVP      +PS RI     G ++I  +V+      Y C  S
Sbjct: 374 LICRANGNPKPRISWLTNGVPTEIAPDDPSRRID----GDTIIFSNVQERSSAVYQCNAS 429

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA     + P               +C   G P P I W    K 
Sbjct: 430 NEYGYLLANAF-VNVLAELPRILTPANTLYQVIANRPAFLDCAFFGSPLPTIEWFKGAK- 487

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K ++G Y C A N LG    +V++ +      I + 
Sbjct: 488 -GSALHEDIYVIHENGTLEIPVAQKDNSGTYTCVARNKLGVAKNEVHLEI-KDPTRILKQ 545

Query: 225 PKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ +  EL       ++   L +TDV  +D 
Sbjct: 546 PEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDNGELPNDERFTVDKDHLVVTDVRDSDG 605

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L     S  L+V     +   P    +    S  F           + + 
Sbjct: 606 GIYTCVANTTLDEVSASAVLSV-----VAPTPTPAPIYDVPSPPFDLELTDQLDKSVQLS 660

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    ++  +      S    + Q          F + A+ +
Sbjct: 661 WTPGDDNNSPITKFIIEYEDAMHEAGLWHHQAEVSGTQTTAQLKLSPYVNYSFRVMAENS 720

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 721 IGRSLPSEASEQYQTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 779

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   +++  + E
Sbjct: 780 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNVMGFAPEPAVVTGHSGE 836

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   +    +    LE+ 
Sbjct: 837 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGRLQGYRIYYWKAQSASQRNRRHLEKK 896

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A     F  P       EG  S P
Sbjct: 897 ILTFQGSKTHGMLPGLEPFSHYALNVRVVNGKGEGPASPDRAFSTP-------EGVPSAP 949

Query: 616 NNLVI 620
           ++L I
Sbjct: 950 SSLKI 954



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 133/342 (38%), Gaps = 53/342 (15%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNGKPIS-QAP 170
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  ISALEVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKD 86

Query: 171 PNPRRKVGPNRITIENLR--KSDT--GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
           P    K G   + I  +   K++T  G Y C A N  G    +  V   + +P  T+   
Sbjct: 87  PLVTMKPGSGTLIINIMSEGKAETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKL 146

Query: 227 DEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKITDVAFADS 282
           +  T+ +G+ +VL CR   G P   + W+ N  Q+     R +    GDL  ++V   D+
Sbjct: 147 EPITLQNGQPLVLPCRPPIGLPPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDT 206

Query: 283 GE-YTCFAR-NKLGTAQGSGSLTVKE------HTHITDQPEDYEVEAGQSATFR------ 328
            E Y C+AR N   T Q    +++K       +  I     D E    +S+  R      
Sbjct: 207 REDYICYARFNHTQTIQQKQPISLKVISVDELNDTIAANLSDTEFYGAKSSKERPPTFLT 266

Query: 329 --CNAVSDPSLKLSIV---------------WLRGSEPIDFESEPRFVQSNDYSLTVTKS 371
              NA     L+ +++               W++  E     +   F ++   +L + + 
Sbjct: 267 PEGNASRKEELRGNVLSLECIAEGLPTPLIYWIK--EDGTLPANRTFYRNFQKTLQIIQV 324

Query: 372 SELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
           SE DSG Y C A+  L  I    ++TV+     + AP N  L
Sbjct: 325 SEADSGNYQCIAKNTLGIIRHTISVTVKAAPYWIMAPRNLVL 366


>gi|37360422|dbj|BAC98189.1| mKIAA1514 protein [Mus musculus]
          Length = 1994

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 176/606 (29%), Positives = 259/606 (42%), Gaps = 34/606 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V     +V + C+    PL +   +W KDG P+  S  IS  +Y + L I +   S
Sbjct: 44  KNTSVVAGTSEVTMECVANARPLIKLHIVWKKDGAPL--SSGIS--DYNRRLTIANPTVS 99

Query: 98  DQGSYTCEV---SNGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLP 153
           D G Y CE    S+ V      +  LSVL  P F  EPE  I A  E+ V   C+A G+P
Sbjct: 100 DAGYYECEAMLRSSSVAPVTRGAY-LSVLEPPQFVREPERHITAEMEKVVDIPCRAKGVP 158

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
            P I W  +   +        ++     + I  L   DTG   C A N+ G      Y+ 
Sbjct: 159 PPSITWYKDAALVEVGKLTRFKQRSDGGLQISGLLPDDTGMLQCFAHNAAGEAQTSTYLA 218

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T+LE
Sbjct: 219 VTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLE 278

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+  
Sbjct: 279 SGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMV 338

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C    DP + +  VW +    +  E+ PR     + SL ++++   D G YTCR  +   
Sbjct: 339 CGVTHDPRVTVRYVWEKDGATLAVETNPRIRLDRNGSLHISQTWSGDIGTYTCRVLSAGG 398

Query: 389 FIEAQATLTVQVPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
                A L V+    AP +    +  ++ +   ++W    P         Y ++  +E +
Sbjct: 399 NDSRNAHLRVRQLPHAPEHPVATLSTVERRAINLTW--AKPFDGNSPLMRYVLEM-SENN 455

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV 507
              +I    V+  E+T+  V   VPA     R+ A N    G  S+    V+    P T 
Sbjct: 456 APWTILLASVDP-EATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTA 514

Query: 508 QSLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
                I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I+D  
Sbjct: 515 PPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRY-CLAGLPVG---YQFKNITDAD 570

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNL 618
             +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    +    +
Sbjct: 571 VNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTI 630

Query: 619 VISWTA 624
             +W A
Sbjct: 631 RFTWNA 636



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 151/564 (26%), Positives = 222/564 (39%), Gaps = 57/564 (10%)

Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
           VT EC A+  P  ++H  W  +G P+S    +  R     R+TI N   SD G Y C A 
Sbjct: 55  VTMECVANARPLIKLHIVWKKDGAPLSSGISDYNR-----RLTIANPTVSDAGYYECEAM 109

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+  V +  Y++VL   P+    P+   T + + VV + CR  G P P + W  + 
Sbjct: 110 LRSSSVAPVTRGAYLSVL-EPPQFVREPERHITAEMEKVVDIPCRAKGVPPPSITWYKDA 168

Query: 257 KELTGGRYTILET---GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHITD 312
             +  G+ T  +    G L+I+ +   D+G   CFA N  G AQ S  L V     +IT 
Sbjct: 169 ALVEVGKLTRFKQRSDGGLQISGLLPDDTGMLQCFAHNAAGEAQTSTYLAVTSIAPNITR 228

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTK 370
            P D  V  G S    C     P  + +I W +G   +   S   PRF      SL ++ 
Sbjct: 229 GPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTLLESGSLLISP 286

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQS 430
           +   D+G YTC A       EA A L V          T I      ++V+     S   
Sbjct: 287 THISDAGTYTCLATNSRGVDEASADLVVWA-------RTRITKPPQDQSVIKGTQASMVC 339

Query: 431 LRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFA--------RVLA 482
              H     V+   EKDG      L V        + +  +  S+ ++        RVL+
Sbjct: 340 GVTHDPRVTVRYVWEKDGA----TLAVETNPRIRLDRNGSLHISQTWSGDIGTYTCRVLS 395

Query: 483 FNGAYNGPPSEIISFV--TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
             G  +      +  +   PE    T+ ++E       A  L W KP   N  LM Y ++
Sbjct: 396 AGGNDSRNAHLRVRQLPHAPEHPVATLSTVE-----RRAINLTWAKPFDGNSPLMRYVLE 450

Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV 600
             S        LL  +    DP  TS  + GL P+  Y+  L      G G  SK    V
Sbjct: 451 -MSENNAPWTILLASV----DPEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERV 505

Query: 601 ------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
                 P   P NV   G T  +++I W   PE   N     Y I +        +   +
Sbjct: 506 SLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKN 565

Query: 655 VLDWRQSELVLANQPTFQPYEIKV 678
           + D   + L+L +   +  YEI+V
Sbjct: 566 ITDADVNNLLLEDLIIWTNYEIEV 589



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 74/177 (41%), Gaps = 11/177 (6%)

Query: 422 SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR-- 479
           +WN  SPQ + G  +GYK+  W E   E  +  +        +  V  FV   K F    
Sbjct: 633 TWNAPSPQFINGINQGYKLIAW-EPAQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYF 690

Query: 480 --VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
             VL F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY
Sbjct: 691 TSVLCFTTPGDGPRSSPQLVRTHEDVPGPVGHLSFNDILDTSLKVSWQEPGEKNGILTGY 750

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           +I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 751 RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 802



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ +      G   GYKV+ + EKD +   R  +V  
Sbjct: 1020 VPSSGPTNVSALATT-SSSMLVRWSEIPEADRNGLVLGYKVR-YKEKDSDSQPRFWLVEG 1077

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1078 NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 1137

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P + Y
Sbjct: 1138 SVRLIWQPPAAPNGIILAYQITHRLNATTANTATVEVL----APSARQYMATGLKPESVY 1193

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1194 LFRITAQTRKGWGEAAEAL 1212



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N   I    A +  V+W P    +  G  +GYK+  W  +    + R   +  
Sbjct: 1444 VPTAAPQNVA-IHSATATQLDVTWEPPPLDNQNGDIQGYKIYFWEVQRRNLTERVKTLFL 1502

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E++  ++      +     V AFN A +GP S      T +  P    S++   L +++
Sbjct: 1503 AENSV-KLKNLTGYTAYMVSVAAFNAAGDGPRSTPTRGQTQQAAPSAPGSVKFSELTTTS 1561

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNG L GY++ Y+
Sbjct: 1562 VNVSWDAPQFPNGPLEGYRLVYE 1584



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 128/308 (41%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 780  LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGAPTNLGISN---------- 825

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +   G I E    L++    N+ ++ + EV    P
Sbjct: 826  IGPRSVTLQFRPGYDGKTSISRWVVEAQVGVIGEGEEWLLIYQLGNEPDARSMEVPDLNP 885

Query: 473  ASKNFARVLAFNGAYNGPPSE----IISFVTPEGV-PGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    I +   P  + P  V    A     ++ +L+W+  
Sbjct: 886  FTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDIAPANVTLRTA---SETSLWLRWMPL 942

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY    G   G  L     + D       +  LE  T+YR+ + 
Sbjct: 943  PEMEYNGNPESVGYKIKYGRSDGH--GKTLSHT--VQDRVEREYTIEDLEEWTEYRVQVQ 998

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S+ +       VP   P NV    +T +++++ W+ +PE + N     Y+
Sbjct: 999  AFNAIGSGPWSQAVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYK 1058

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1059 VRYKEKDS 1066



 Score = 39.7 bits (91), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 50/221 (22%), Positives = 84/221 (38%), Gaps = 36/221 (16%)

Query: 401  PLEAPSNFTLIQVI--DAKKAVVSWNPVSPQSLRGHFRGYKVQ----------------- 441
            P EAP   T++ V        ++ W P S   + G   G++++                 
Sbjct: 1323 PDEAP---TILSVTPHTTTSVLIRWQPPSEDKINGILLGFRIRYRELLYDGLRGFTLRGI 1379

Query: 442  -----TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS 496
                  W E     S+R L   +   T  E+D      +   R+  +N    GP S    
Sbjct: 1380 NNPGAKWAELTSLYSMRNL--TRPSLTQYELDNLSKHRRYEIRMSIYNAVGEGPLSPPQE 1437

Query: 497  FVTPEGVPGTV-QSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLL 553
                E VP    Q++      ++   + W  P  +  NG + GYKI +  V+   +   +
Sbjct: 1438 VFVGEAVPTAAPQNVAIHSATATQLDVTWEPPPLDNQNGDIQGYKIYFWEVQRRNLTERV 1497

Query: 554  ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            + L ++++    S KL  L   T Y + +A +  AGDG  S
Sbjct: 1498 KTL-FLAE---NSVKLKNLTGYTAYMVSVAAFNAAGDGPRS 1534


>gi|348568091|ref|XP_003469832.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Cavia
           porcellus]
          Length = 1211

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/400 (34%), Positives = 199/400 (49%), Gaps = 21/400 (5%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           +RK+E  LR   + L CI  G P P   W K+   + P++R    N+ K+L I  V  +D
Sbjct: 278 SRKEE--LRGNVLSLECIAEGLPTPLIYWIKEDGTL-PANRTFYRNFQKTLQIIQVSEAD 334

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G+Y C   N +G  + ++I ++V AAPY+ + P  +  +  E  T  C+A+G P+P I 
Sbjct: 335 SGNYQCIAKNTLGIIR-HTISVTVKAAPYWIMAPRNLVLSPGEDGTLICRANGNPKPRIS 393

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG P   AP +P R++  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  
Sbjct: 394 WLTNGVPTEIAPDDPSRRIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEL 453

Query: 219 PEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKIT 275
           P I       Y V   +   L C  FG+P P + W    K   L    Y I E G L+I 
Sbjct: 454 PRILTPANTLYQVIANRPAFLDCAFFGSPLPTIEWFKGAKGSALHEDIYVIHENGTLEIP 513

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
                +SG YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D 
Sbjct: 514 VAQKDNSGTYTCVARNKLGVAKNEVHLEIKDPTRILKQPEYAVVQRGGRVSFECKVKHDH 573

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
           +L  ++ WL+ +   +  ++ RF    D+ L VT   + D G YTC A T LD + A A 
Sbjct: 574 TLIATVTWLKDNG--ELPNDERFTVDKDH-LVVTDVRDSDGGIYTCVANTTLDEVSASAV 630

Query: 396 LTVQVPLEAPS----------NFTLIQVIDAKKAVVSWNP 425
           L+V  P   P+          +  L   +D K   +SW P
Sbjct: 631 LSVVAPTPTPAPIYDVPSPPFDLELTDQLD-KSVQLSWTP 669



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 147/573 (25%), Positives = 238/573 (41%), Gaps = 57/573 (9%)

Query: 136 NAAEEE-----TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENL 187
           NA+ +E      ++ EC A GLP P I+W+   K     P N  R    N    + I  +
Sbjct: 276 NASRKEELRGNVLSLECIAEGLPTPLIYWI---KEDGTLPAN--RTFYRNFQKTLQIIQV 330

Query: 188 RKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPK 247
            ++D+GNY C A N+LG +   + V V A AP    AP++     G+   L CR  G PK
Sbjct: 331 SEADSGNYQCIAKNTLGIIRHTISVTVKA-APYWIMAPRNLVLSPGEDGTLICRANGNPK 389

Query: 248 PEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTV 304
           P ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    +  + V
Sbjct: 390 PRISWLTNGVPTEIAPDDPSRRIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNV 449

Query: 305 KEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
                    P +  Y+V A + A   C     P    +I W +G++      +   +  N
Sbjct: 450 LAELPRILTPANTLYQVIANRPAFLDCAFFGSP--LPTIEWFKGAKGSALHEDIYVIHEN 507

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKA 419
             +L +  + + +SG YTC A+ +L   + +  L ++ P   L+ P  + ++Q    +  
Sbjct: 508 G-TLEIPVAQKDNSGTYTCVARNKLGVAKNEVHLEIKDPTRILKQPE-YAVVQ----RGG 561

Query: 420 VVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRE-LIVNKGESTTTEVDKFVPASKNFA 478
            VS+       ++         TW + +GE    E   V+K     T+V     +     
Sbjct: 562 RVSFE----CKVKHDHTLIATVTWLKDNGELPNDERFTVDKDHLVVTDVRD---SDGGIY 614

Query: 479 RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPN 531
             +A         S ++S V P   P  +  + + P           +  L W   +  N
Sbjct: 615 TCVANTTLDEVSASAVLSVVAPTPTPAPIYDVPSPPFDLELTDQLDKSVQLSWTPGDDNN 674

Query: 532 GVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             +  + I+Y+         L      +S  T T+A+L  L P   Y   +      G  
Sbjct: 675 SPITKFIIEYED--AMHEAGLWHHQAEVSG-TQTTAQLK-LSPYVNYSFRVMAENSIGRS 730

Query: 592 ----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
               A  +Y      P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +
Sbjct: 731 LPSEASEQYQTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKD 790

Query: 646 TGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
             + W    V+    S+ +++  PTF PY IKV
Sbjct: 791 GDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 821



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 139/595 (23%), Positives = 243/595 (40%), Gaps = 69/595 (11%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
            + N+   L C F G+PLP   W K        + I   +   +L I   +  + G+YTC 
Sbjct: 467  IANRPAFLDCAFFGSPLPTIEWFKGAKGSALHEDIYVIHENGTLEIPVAQKDNSGTYTCV 526

Query: 106  VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPE--PEIHWVHNG 163
              N +G AK+  + L +        +PE+        V+FECK          + W+ + 
Sbjct: 527  ARNKLGVAKN-EVHLEIKDPTRILKQPEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDN 585

Query: 164  KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP---- 219
                + P + R  V  + + + ++R SD G Y C A  +L  V     ++V+A  P    
Sbjct: 586  ---GELPNDERFTVDKDHLVVTDVRDSDGGIYTCVANTTLDEVSASAVLSVVAPTPTPAP 642

Query: 220  --EITEAPKDEYTVD--GKTVVLT--------------CRVFGAPKPEVNWIHNQKELTG 261
              ++   P D    D   K+V L+                 +     E    H+Q E++G
Sbjct: 643  IYDVPSPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQAEVSG 702

Query: 262  GRYTILETGDLKITDVAFADSGEYTCFARNKLGTA---------QGSGSLTVKEHTHIT- 311
             +     T  LK++      +  +   A N +G +         Q   +   K  T +  
Sbjct: 703  TQ----TTAQLKLSPYV---NYSFRVMAENSIGRSLPSEASEQYQTKAAEPDKNPTAVEG 755

Query: 312  --DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
               +P++  +       F  N    P L+  + W +     ++ S    V +N     V+
Sbjct: 756  LGSEPDNLVITWKPLNGFESNG---PGLQYKVSWRQKDGDDEWTS---VVVANVSKYIVS 809

Query: 370  KSSELDSGQYTCRAQTELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVSWNP 425
             +          +A   + F    A +T      +P+ AP N   + V+++  A V W+P
Sbjct: 810  GTPTFVPYLIKVQALNVMGFAPEPAVVTGHSGEDLPMVAPGNVR-VNVVNSTLAEVHWDP 868

Query: 426  VSPQSLRGHFRGYKVQTW-----TEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
            V  +S+RG  +GY++  W     ++++     ++++  +G  T   +    P S     V
Sbjct: 869  VPLKSIRGRLQGYRIYYWKAQSASQRNRRHLEKKILTFQGSKTHGMLPGLEPFSHYALNV 928

Query: 481  LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
               NG   GP S   +F TPEGVP    SL+ +     +  L+W  P +PNG+L  Y +K
Sbjct: 929  RVVNGKGEGPASPDRAFSTPEGVPSAPSSLKIVNPTLDSLTLEWDPPSRPNGILTEYTLK 988

Query: 541  YQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
            YQ +  T ++GPL++ ++P       T   L  L  ST+Y+ +    T  G G++
Sbjct: 989  YQPINSTHELGPLIDLKIPA----NKTRWTLKNLNFSTRYKFYFYAQTSVGPGSQ 1039



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 136/605 (22%), Positives = 223/605 (36%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVP      +PS RI     G ++I  +V+      Y C  S
Sbjct: 380 LICRANGNPKPRISWLTNGVPTEIAPDDPSRRID----GDTIIFSNVQERSSAVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA     + P               +C   G P P I W    K 
Sbjct: 436 NEYGYLLANAF-VNVLAELPRILTPANTLYQVIANRPAFLDCAFFGSPLPTIEWFKGAK- 493

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K ++G Y C A N LG    +V++ +      I + 
Sbjct: 494 -GSALHEDIYVIHENGTLEIPVAQKDNSGTYTCVARNKLGVAKNEVHLEI-KDPTRILKQ 551

Query: 225 PKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ +  EL       ++   L +TDV  +D 
Sbjct: 552 PEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDNGELPNDERFTVDKDHLVVTDVRDSDG 611

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L     S  L+V     +   P    +    S  F           + + 
Sbjct: 612 GIYTCVANTTLDEVSASAVLSV-----VAPTPTPAPIYDVPSPPFDLELTDQLDKSVQLS 666

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    ++  +      S    + Q          F + A+ +
Sbjct: 667 WTPGDDNNSPITKFIIEYEDAMHEAGLWHHQAEVSGTQTTAQLKLSPYVNYSFRVMAENS 726

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 727 IGRSLPSEASEQYQTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 785

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   +++  + E
Sbjct: 786 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNVMGFAPEPAVVTGHSGE 842

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   +    +    LE+ 
Sbjct: 843 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGRLQGYRIYYWKAQSASQRNRRHLEKK 902

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A     F  P       EG  S P
Sbjct: 903 ILTFQGSKTHGMLPGLEPFSHYALNVRVVNGKGEGPASPDRAFSTP-------EGVPSAP 955

Query: 616 NNLVI 620
           ++L I
Sbjct: 956 SSLKI 960



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 125/313 (39%), Gaps = 45/313 (14%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   + I  +   K++T  G Y
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGSGTLIINIMSEGKAETYEGVY 121

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +  V   + +P  T+   +  T+ +G+ +VL CR   G P   + W+
Sbjct: 122 QCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQNGQPLVLPCRPPIGLPPAIIFWM 181

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVKE--- 306
            N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    +++K    
Sbjct: 182 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISLKVISV 241

Query: 307 ---HTHITDQPEDYEVEAGQSATFR--------CNAVSDPSLKLSIV------------- 342
              +  I     D E    +S+  R         NA     L+ +++             
Sbjct: 242 DELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNASRKEELRGNVLSLECIAEGLPTPL 301

Query: 343 --WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
             W++  E     +   F ++   +L + + SE DSG Y C A+  L  I    ++TV+ 
Sbjct: 302 IYWIK--EDGTLPANRTFYRNFQKTLQIIQVSEADSGNYQCIAKNTLGIIRHTISVTVKA 359

Query: 401 P---LEAPSNFTL 410
               + AP N  L
Sbjct: 360 APYWIMAPRNLVL 372


>gi|348568093|ref|XP_003469833.1| PREDICTED: neuronal cell adhesion molecule isoform 5 [Cavia
           porcellus]
          Length = 1180

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/400 (34%), Positives = 199/400 (49%), Gaps = 21/400 (5%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           +RK+E  LR   + L CI  G P P   W K+   + P++R    N+ K+L I  V  +D
Sbjct: 259 SRKEE--LRGNVLSLECIAEGLPTPLIYWIKEDGTL-PANRTFYRNFQKTLQIIQVSEAD 315

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G+Y C   N +G  + ++I ++V AAPY+ + P  +  +  E  T  C+A+G P+P I 
Sbjct: 316 SGNYQCIAKNTLGIIR-HTISVTVKAAPYWIMAPRNLVLSPGEDGTLICRANGNPKPRIS 374

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG P   AP +P R++  + I   N+++  +  Y CNA+N  GY+  + +VNVLA  
Sbjct: 375 WLTNGVPTEIAPDDPSRRIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEL 434

Query: 219 PEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKIT 275
           P I       Y V   +   L C  FG+P P + W    K   L    Y I E G L+I 
Sbjct: 435 PRILTPANTLYQVIANRPAFLDCAFFGSPLPTIEWFKGAKGSALHEDIYVIHENGTLEIP 494

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
                +SG YTC ARNKLG A+    L +K+ T I  QPE   V+ G   +F C    D 
Sbjct: 495 VAQKDNSGTYTCVARNKLGVAKNEVHLEIKDPTRILKQPEYAVVQRGGRVSFECKVKHDH 554

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
           +L  ++ WL+ +   +  ++ RF    D+ L VT   + D G YTC A T LD + A A 
Sbjct: 555 TLIATVTWLKDNG--ELPNDERFTVDKDH-LVVTDVRDSDGGIYTCVANTTLDEVSASAV 611

Query: 396 LTVQVPLEAPS----------NFTLIQVIDAKKAVVSWNP 425
           L+V  P   P+          +  L   +D K   +SW P
Sbjct: 612 LSVVAPTPTPAPIYDVPSPPFDLELTDQLD-KSVQLSWTP 650



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 161/639 (25%), Positives = 262/639 (41%), Gaps = 64/639 (10%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTC--EVSNGVGEAKSYSIDLSVLAA------PYF 128
           S+R+SQG  G       +    +  Y C    ++     +   I L V++A      P  
Sbjct: 191 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISLKVISAKSSKERPPT 250

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---R 181
            + PE   + +EE     ++ EC A GLP P I+W+   K     P N  R    N    
Sbjct: 251 FLTPEGNASRKEELRGNVLSLECIAEGLPTPLIYWI---KEDGTLPAN--RTFYRNFQKT 305

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR 241
           + I  + ++D+GNY C A N+LG +   + V V A AP    AP++     G+   L CR
Sbjct: 306 LQIIQVSEADSGNYQCIAKNTLGIIRHTISVTVKA-APYWIMAPRNLVLSPGEDGTLICR 364

Query: 242 VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQG 298
             G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    
Sbjct: 365 ANGNPKPRISWLTNGVPTEIAPDDPSRRIDGDTIIFSNVQERSSAVYQCNASNEYGYLLA 424

Query: 299 SGSLTVKEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           +  + V         P +  Y+V A + A   C     P    +I W +G++      + 
Sbjct: 425 NAFVNVLAELPRILTPANTLYQVIANRPAFLDCAFFGSP--LPTIEWFKGAKGSALHEDI 482

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQV 413
             +  N  +L +  + + +SG YTC A+ +L   + +  L ++ P   L+ P  + ++Q 
Sbjct: 483 YVIHENG-TLEIPVAQKDNSGTYTCVARNKLGVAKNEVHLEIKDPTRILKQPE-YAVVQ- 539

Query: 414 IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRE-LIVNKGESTTTEVDKFVP 472
              +   VS+       ++         TW + +GE    E   V+K     T+V     
Sbjct: 540 ---RGGRVSFE----CKVKHDHTLIATVTWLKDNGELPNDERFTVDKDHLVVTDVRD--- 589

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWV 525
           +       +A         S ++S V P   P  +  + + P           +  L W 
Sbjct: 590 SDGGIYTCVANTTLDEVSASAVLSVVAPTPTPAPIYDVPSPPFDLELTDQLDKSVQLSWT 649

Query: 526 KPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
             +  N  +  + I+Y+         L      +S  T T+A+L  L P   Y   +   
Sbjct: 650 PGDDNNSPITKFIIEYED--AMHEAGLWHHQAEVSG-TQTTAQLK-LSPYVNYSFRVMAE 705

Query: 586 TKAGDG----AESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI 639
              G      A  +Y      P KNP  VEG GS P+NLVI+W  +   E N P  +Y++
Sbjct: 706 NSIGRSLPSEASEQYQTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV 765

Query: 640 FWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            WR+ +  + W    V+    S+ +++  PTF PY IKV
Sbjct: 766 SWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 802



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 139/595 (23%), Positives = 243/595 (40%), Gaps = 69/595 (11%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
            + N+   L C F G+PLP   W K        + I   +   +L I   +  + G+YTC 
Sbjct: 448  IANRPAFLDCAFFGSPLPTIEWFKGAKGSALHEDIYVIHENGTLEIPVAQKDNSGTYTCV 507

Query: 106  VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPE--PEIHWVHNG 163
              N +G AK+  + L +        +PE+        V+FECK          + W+ + 
Sbjct: 508  ARNKLGVAKN-EVHLEIKDPTRILKQPEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDN 566

Query: 164  KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP---- 219
                + P + R  V  + + + ++R SD G Y C A  +L  V     ++V+A  P    
Sbjct: 567  ---GELPNDERFTVDKDHLVVTDVRDSDGGIYTCVANTTLDEVSASAVLSVVAPTPTPAP 623

Query: 220  --EITEAPKDEYTVD--GKTVVLT--------------CRVFGAPKPEVNWIHNQKELTG 261
              ++   P D    D   K+V L+                 +     E    H+Q E++G
Sbjct: 624  IYDVPSPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQAEVSG 683

Query: 262  GRYTILETGDLKITDVAFADSGEYTCFARNKLGTA---------QGSGSLTVKEHTHIT- 311
             +     T  LK++      +  +   A N +G +         Q   +   K  T +  
Sbjct: 684  TQ----TTAQLKLSPYV---NYSFRVMAENSIGRSLPSEASEQYQTKAAEPDKNPTAVEG 736

Query: 312  --DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
               +P++  +       F  N    P L+  + W +     ++ S    V +N     V+
Sbjct: 737  LGSEPDNLVITWKPLNGFESNG---PGLQYKVSWRQKDGDDEWTS---VVVANVSKYIVS 790

Query: 370  KSSELDSGQYTCRAQTELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVSWNP 425
             +          +A   + F    A +T      +P+ AP N   + V+++  A V W+P
Sbjct: 791  GTPTFVPYLIKVQALNVMGFAPEPAVVTGHSGEDLPMVAPGNVR-VNVVNSTLAEVHWDP 849

Query: 426  VSPQSLRGHFRGYKVQTW-----TEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
            V  +S+RG  +GY++  W     ++++     ++++  +G  T   +    P S     V
Sbjct: 850  VPLKSIRGRLQGYRIYYWKAQSASQRNRRHLEKKILTFQGSKTHGMLPGLEPFSHYALNV 909

Query: 481  LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
               NG   GP S   +F TPEGVP    SL+ +     +  L+W  P +PNG+L  Y +K
Sbjct: 910  RVVNGKGEGPASPDRAFSTPEGVPSAPSSLKIVNPTLDSLTLEWDPPSRPNGILTEYTLK 969

Query: 541  YQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
            YQ +  T ++GPL++ ++P       T   L  L  ST+Y+ +    T  G G++
Sbjct: 970  YQPINSTHELGPLIDLKIPA----NKTRWTLKNLNFSTRYKFYFYAQTSVGPGSQ 1020



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 136/605 (22%), Positives = 223/605 (36%), Gaps = 61/605 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVP      +PS RI     G ++I  +V+      Y C  S
Sbjct: 361 LICRANGNPKPRISWLTNGVPTEIAPDDPSRRID----GDTIIFSNVQERSSAVYQCNAS 416

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA     + P               +C   G P P I W    K 
Sbjct: 417 NEYGYLLANAF-VNVLAELPRILTPANTLYQVIANRPAFLDCAFFGSPLPTIEWFKGAK- 474

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I   +K ++G Y C A N LG    +V++ +      I + 
Sbjct: 475 -GSALHEDIYVIHENGTLEIPVAQKDNSGTYTCVARNKLGVAKNEVHLEI-KDPTRILKQ 532

Query: 225 PKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G  V   C+V         V W+ +  EL       ++   L +TDV  +D 
Sbjct: 533 PEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDNGELPNDERFTVDKDHLVVTDVRDSDG 592

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L     S  L+V     +   P    +    S  F           + + 
Sbjct: 593 GIYTCVANTTLDEVSASAVLSV-----VAPTPTPAPIYDVPSPPFDLELTDQLDKSVQLS 647

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    ++  +      S    + Q          F + A+ +
Sbjct: 648 WTPGDDNNSPITKFIIEYEDAMHEAGLWHHQAEVSGTQTTAQLKLSPYVNYSFRVMAENS 707

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P EA   +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 708 IGRSLPSEASEQYQTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 766

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   +++  + E
Sbjct: 767 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNVMGFAPEPAVVTGHSGE 823

Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
            +P     ++    + S+   + W  V  +   G L GY+I Y   +    +    LE+ 
Sbjct: 824 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGRLQGYRIYYWKAQSASQRNRRHLEKK 883

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
                 + T   L GLEP + Y +++      G+G A     F  P       EG  S P
Sbjct: 884 ILTFQGSKTHGMLPGLEPFSHYALNVRVVNGKGEGPASPDRAFSTP-------EGVPSAP 936

Query: 616 NNLVI 620
           ++L I
Sbjct: 937 SSLKI 941



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 122/294 (41%), Gaps = 26/294 (8%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   + I  +   K++T  G Y
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGSGTLIINIMSEGKAETYEGVY 121

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +  V   + +P  T+   +  T+ +G+ +VL CR   G P   + W+
Sbjct: 122 QCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQNGQPLVLPCRPPIGLPPAIIFWM 181

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSG--SLTVKEH 307
            N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q     SL V   
Sbjct: 182 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISLKVISA 241

Query: 308 THITDQPEDY---EVEAGQSATFRCNAVSDPSLKLS-----IVWLRGSEPIDFESEPRFV 359
               ++P  +   E  A +    R N +S   +        I W++  E     +   F 
Sbjct: 242 KSSKERPPTFLTPEGNASRKEELRGNVLSLECIAEGLPTPLIYWIK--EDGTLPANRTFY 299

Query: 360 QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
           ++   +L + + SE DSG Y C A+  L  I    ++TV+     + AP N  L
Sbjct: 300 RNFQKTLQIIQVSEADSGNYQCIAKNTLGIIRHTISVTVKAAPYWIMAPRNLVL 353


>gi|395826906|ref|XP_003786654.1| PREDICTED: protein sidekick-2 [Otolemur garnettii]
          Length = 2202

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 180/606 (29%), Positives = 261/606 (43%), Gaps = 34/606 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V     +V + C+    PL +   +W KDG P+  S  IS  +Y + L I +   S
Sbjct: 252 KNTSVVAGTSEVTMECVANARPLIKLHIMWKKDGAPL--SSGIS--DYNRRLTIPNPTGS 307

Query: 98  DQGSYTCEVSNGVGEAKSY--SIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPE 154
           D G Y CE         S      LSV   P F  EPE  I A  E+ V   C+A G+P 
Sbjct: 308 DAGYYECEAILRSSSVPSVVRGAYLSVWEPPQFVKEPERHITAEMEKVVDIPCRAKGVPP 367

Query: 155 PEIHWVHNGKPISQAPPNPR-RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P I W  +   + +    PR R+ G   + I +L   DTG + C A N+ G V    Y+ 
Sbjct: 368 PAITWYKDAA-VVEVEKLPRFRQRGDGSLQISSLVPDDTGMFQCFARNAAGEVQTSTYLA 426

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T LE
Sbjct: 427 VTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLE 486

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+  
Sbjct: 487 SGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITRPPQDQSVIKGTQASMV 546

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C    DP + +  VW +    +  E+ PR     + SL V+++   D G YTCR  +   
Sbjct: 547 CGVTHDPRVTIRYVWEKDGAALGMENNPRIRLDKNGSLHVSQTWSGDIGTYTCRVISAGG 606

Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV-VSWNPVSPQSLRGHFRGYKVQTWTEKD 447
                A L V+    AP +         ++A+ ++W    P         Y ++  +E +
Sbjct: 607 NDSRSAHLRVRQLPHAPEHPVATLSTAERRAINLTW--AKPFDGNSPLLRYVLEM-SENN 663

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV 507
              ++    V+  E+T+  V   VPA     R+ A N    G  S+    V+    P T 
Sbjct: 664 APWTVLLASVDP-EATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTA 722

Query: 508 QSLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
                I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I+D  
Sbjct: 723 PPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRY-CLAGLPVG---YQFKNITDAD 778

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNL 618
             +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    +    +
Sbjct: 779 VNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTI 838

Query: 619 VISWTA 624
             +W A
Sbjct: 839 RFTWNA 844



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 147/566 (25%), Positives = 220/566 (38%), Gaps = 61/566 (10%)

Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
           VT EC A+  P  ++H  W  +G P+S    +  R     R+TI N   SD G Y C A 
Sbjct: 263 VTMECVANARPLIKLHIMWKKDGAPLSSGISDYNR-----RLTIPNPTGSDAGYYECEAI 317

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+  V +  Y++V    P+  + P+   T + + VV + CR  G P P + W  + 
Sbjct: 318 LRSSSVPSVVRGAYLSVW-EPPQFVKEPERHITAEMEKVVDIPCRAKGVPPPAITWYKDA 376

Query: 257 KEL---TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHITD 312
             +      R+     G L+I+ +   D+G + CFARN  G  Q S  L V     +IT 
Sbjct: 377 AVVEVEKLPRFRQRGDGSLQISSLVPDDTGMFQCFARNAAGEVQTSTYLAVTSIAPNITR 436

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTK 370
            P D  V  G S    C     P  + +I W +G   +   S   PRF      SL ++ 
Sbjct: 437 GPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTPLESGSLLISP 494

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVPLEA---PSNFTLIQVIDAKKAV-VSWNPV 426
           +   D+G YTC A       EA A L V         P + ++I+   A     V+ +P 
Sbjct: 495 THISDAGTYTCLATNSRGVDEASADLVVWARTRITRPPQDQSVIKGTQASMVCGVTHDPR 554

Query: 427 SPQSLR------GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
              ++R      G   G +       D  GS+       G+  T    + + A  N +R 
Sbjct: 555 V--TIRYVWEKDGAALGMENNPRIRLDKNGSLHVSQTWSGDIGTYTC-RVISAGGNDSRS 611

Query: 481 --LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
             L      + P   + +  T E                 A  L W KP   N  L+ Y 
Sbjct: 612 AHLRVRQLPHAPEHPVATLSTAE---------------RRAINLTWAKPFDGNSPLLRYV 656

Query: 539 IKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF 598
           ++  S        LL  +    DP  TS  + GL P+  Y+  L      G G  SK   
Sbjct: 657 LE-MSENNAPWTVLLASV----DPEATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTE 711

Query: 599 YV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
            V      P   P NV   G T  +++I W   PE   N     Y I +        +  
Sbjct: 712 RVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQF 771

Query: 653 DDVLDWRQSELVLANQPTFQPYEIKV 678
            ++ D   + L+L +   +  YEI+V
Sbjct: 772 KNITDADVNNLLLEDLIIWTNYEIEV 797



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 11/177 (6%)

Query: 422  SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR-- 479
            +WN  SPQ + G  +GYK+  W E + E  +  +        +  V  FV   K F    
Sbjct: 841  TWNAPSPQFINGINQGYKLIAW-EPEQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYF 898

Query: 480  --VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
              VL F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY
Sbjct: 899  TSVLCFTTPGDGPRSTPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGY 958

Query: 538  KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            +I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 959  RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 1010



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ V      G   GYKV  + EKD +   R  +V  
Sbjct: 1228 VPSSGPTNVSALATTSSS-MLVRWSDVPEADRNGLVLGYKVM-YKEKDSDAQPRSWLVEG 1285

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   +   T + VPG    +    + ++
Sbjct: 1286 NSSRSAQLTGLGKYVLYQVQVLAFTRVGDGTPSHPPVLERTLDDVPGPPVGILFPEVRTT 1345

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P + Y
Sbjct: 1346 SVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVL----APSARQYTATGLKPESVY 1401

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1402 LFRITAQTRKGWGEAAEAL 1420



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 129/308 (41%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 988  LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGPPTNLGISN---------- 1033

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIVNK--GE--STTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +   G I E    L++++  GE  + + EV    P
Sbjct: 1034 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVIGEGEEWLLIHQLSGEPDARSMEVPNLNP 1093

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 1094 FTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTA---SETSLWLRWMPL 1150

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY    G   G  L  +  + D       +  LE  T+YR+ + 
Sbjct: 1151 PEMEYNGNPESVGYKIKYSRSDGH--GKTLSHM--VQDRLEREYTIEDLEEWTEYRVQVQ 1206

Query: 584  GYTKAGDGAESKYLFY-----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S+ +       VP   P NV    +T +++++ W+ +PE + N     Y+
Sbjct: 1207 AFNAIGSGPWSQMVMSRTRESVPSSGPTNVSALATTSSSMLVRWSDVPEADRNGLVLGYK 1266

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1267 VMYKEKDS 1274



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N   +    A +  V+W P    S  G  +GYK+  W  +    + R   +  
Sbjct: 1652 VPTAAPRNVA-VHGATATQLDVTWEPPPLDSQNGDIQGYKIYFWEAQRPNFTERVKTLFL 1710

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E++  ++      +     V AFN A +GP S      T +  P   + +    L +++
Sbjct: 1711 AENSV-KLKNLTGYTAYMVSVAAFNAAGDGPRSTPTRGQTQQAAPSAPRLVRFSELTTTS 1769

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNG+L GY++ Y+
Sbjct: 1770 VNVSWEAPQFPNGILEGYRLVYE 1792



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 108/262 (41%), Gaps = 44/262 (16%)

Query: 414  IDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDK 469
            + A+  ++SW P    +SP       R Y VQT     G  ++    V+   S    VD+
Sbjct: 1443 VKARSVLLSWEPGSDGLSP------VRYYTVQTRELPSGRWTLHSASVSHNASAFI-VDR 1495

Query: 470  FVPASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKW 524
              P +    RV A N   +   SE    +T     P+  P     L   P  +++  ++W
Sbjct: 1496 LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTI---LSVTPHTTTSVLIRW 1552

Query: 525  VKP--EQPNGVLMGYKIKYQ----------SVKGTK--VGPLLERLPY-----ISDPTTT 565
              P  ++ NG+L+G++I+Y+          +++G         E  P      +S P+ T
Sbjct: 1553 QPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPAATWAELTPMYSVRNLSRPSLT 1612

Query: 566  SAKLAGLEPSTKYRIHLAGYTKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVI 620
              +L  L    +Y I ++ Y   G+G  S  + +F    VP   P NV   G+T   L +
Sbjct: 1613 QYELDNLNKHRRYEIRMSVYNTVGEGPPSPPQEVFVGEAVPTAAPRNVAVHGATATQLDV 1672

Query: 621  SWTAMPEIEHNAPHFKYRI-FW 641
            +W   P    N     Y+I FW
Sbjct: 1673 TWEPPPLDSQNGDIQGYKIYFW 1694



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 4/73 (5%)

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
           TE  + +  ++G  +VLTC   G+   E  W+HN +ELT  ++++       IT +  A 
Sbjct: 84  TEPVRTQVHLEGNRLVLTCMAEGSWPLEFKWLHNNRELT--KFSL--EYRYMITSLDRAH 139

Query: 282 SGEYTCFARNKLG 294
           +G Y C  RN++G
Sbjct: 140 AGFYRCIVRNRMG 152



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 96/273 (35%), Gaps = 49/273 (17%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           +PYF  EP       E   +   C A G    E  W+HN + +++            R  
Sbjct: 79  SPYFKTEPVRTQVHLEGNRLVLTCMAEGSWPLEFKWLHNNRELTKFSLE-------YRYM 131

Query: 184 IENLRKSDTGNYGCNATNSLG-YVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRV 242
           I +L ++  G Y C   N +G  + +   V V    PE            G    L+CR 
Sbjct: 132 ITSLDRAHAGFYRCIVRNRMGALLQRQTEVQVALTQPE----------SPGLYGALSCR- 180

Query: 243 FGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSGS 301
                        QK     +  I     L I      D+G Y   A N K G  + S  
Sbjct: 181 ------------GQKVYPRSQLAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQP 228

Query: 302 LTVK----------EHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEPI 350
           +T+               I   P++  V AG S  T  C A + P +KL I+W +   P+
Sbjct: 229 ITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIMWKKDGAPL 288

Query: 351 DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
                   +   +  LT+   +  D+G Y C A
Sbjct: 289 S-----SGISDYNRRLTIPNPTGSDAGYYECEA 316


>gi|348568334|ref|XP_003469953.1| PREDICTED: protein sidekick-1 [Cavia porcellus]
          Length = 2115

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 184/622 (29%), Positives = 271/622 (43%), Gaps = 38/622 (6%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
           + V   + +  L CI    P+ +    W ++GV      R++ G  ++G+ L I +   +
Sbjct: 206 RSVVAGSSETTLECIASARPVEELSVHWKRNGV------RLTSGLHSFGRRLTISNPTST 259

Query: 98  DQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPE 154
           D G Y CE +      E       LS++  PYFT EPE  I    EETV   C+A G+P 
Sbjct: 260 DTGLYVCEATLRGSAFEPARAKAFLSIIEPPYFTAEPESRILVEVEETVDIMCRAMGVPL 319

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P + W  +   I++   NPR +V P+  + I+ L   D+G + C A+N  G +    Y++
Sbjct: 320 PTLQWYKDAVSINKLQ-NPRYQVLPSGGLRIQKLHPEDSGIFQCFASNEGGEIQTHTYLD 378

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V   AP   + P D    DG T VL C V GAPKP V W      L  G     R+ +LE
Sbjct: 379 VTNVAPTFIQCPADTTVTDGMTAVLRCEVSGAPKPAVTWKRGNNILASGSVRIPRFMLLE 438

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L+IT V   D+G YTC+A N  G+   S +LTV   T I   PED  V  G +A   
Sbjct: 439 SGGLQITPVFIQDAGNYTCYALNTEGSLNASATLTVWNRTSIIHPPEDRVVIKGTTAALH 498

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A  DP + L  VW + +  I   S  R V   D SL ++++   D G YTC   +E  
Sbjct: 499 CGATHDPRISLRYVWKKDNAVITPSSSSRIVVEKDGSLLISQTWSGDIGDYTCEIVSEGG 558

Query: 389 FIEAQATL-TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
                A L  +++P    +    +    +   V+SW  V P         Y V+  +E +
Sbjct: 559 NDSRTARLEVIELPHPPQNLLASLSPSHSHAVVLSW--VRPFDGNSPVLHYIVEL-SENN 615

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGT 506
               +    V   E T   V    PA     RV A N    G  S E    + PE  P  
Sbjct: 616 SPWKVHLSDVGP-EMTGITVSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSA 674

Query: 507 -VQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
             +++ A    + +  ++W  P +   NGVL GY ++Y+ + G    P   +   I+ P 
Sbjct: 675 PPKNIVASGRTNQSIMVQWQPPPETEHNGVLHGYILRYR-LAGL---PGEHQQRNITSPE 730

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEGRGSTPNNL 618
                +  L   T+Y I +A Y  AG G  S+      L  VP   P NV+        +
Sbjct: 731 VNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVAEYTLQGVPTAPPQNVQAEAVNSTTV 790

Query: 619 VISWTAMPEIEHNAPHFKYRIF 640
              W   P+   N  +  Y++ 
Sbjct: 791 QFLWNPPPQQFINGINQGYKLL 812



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 177/687 (25%), Positives = 272/687 (39%), Gaps = 87/687 (12%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           ++K V+  +  V         P PQ  W ++G  I PS+RI+       L+I     SD 
Sbjct: 102 QRKMVSQGHAAVLNLLPINSCPRPQVTWFREGHKIIPSNRIAI-TLENQLVILSTTASDA 160

Query: 100 GSYTCEVSNGV-GEAK-SYSIDLSV--------LAAPYFTVEP--EFINAAEEETVTFEC 147
           G+Y  +  N   GE K S  I LS+          AP   V P    + A   ET T EC
Sbjct: 161 GAYYVQAVNERNGENKTSPFIHLSIARDMGTPEAMAPVIVVAPGNRSVVAGSSET-TLEC 219

Query: 148 KASGLP--EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT---NS 202
            AS  P  E  +HW  NG  ++    +  R     R+TI N   +DTG Y C AT   ++
Sbjct: 220 IASARPVEELSVHWKRNGVRLTSGLHSFGR-----RLTISNPTSTDTGLYVCEATLRGSA 274

Query: 203 LGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KE 258
                   +++++   P  T  P+    V+  +TV + CR  G P P + W  +     +
Sbjct: 275 FEPARAKAFLSII-EPPYFTAEPESRILVEVEETVDIMCRAMGVPLPTLQWYKDAVSINK 333

Query: 259 LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ-PEDY 317
           L   RY +L +G L+I  +   DSG + CFA N+ G  Q    L V        Q P D 
Sbjct: 334 LQNPRYQVLPSGGLRIQKLHPEDSGIFQCFASNEGGEIQTHTYLDVTNVAPTFIQCPADT 393

Query: 318 EVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELD 375
            V  G +A  RC     P  K ++ W RG+  +   S   PRF+      L +T     D
Sbjct: 394 TVTDGMTAVLRCEVSGAP--KPAVTWKRGNNILASGSVRIPRFMLLESGGLQITPVFIQD 451

Query: 376 SGQYTCRAQTELDFIEAQATLTV---QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQ-SL 431
           +G YTC A      + A ATLTV      +  P +  +I+   A  A+       P+ SL
Sbjct: 452 AGNYTCYALNTEGSLNASATLTVWNRTSIIHPPEDRVVIKGTTA--ALHCGATHDPRISL 509

Query: 432 RGHFR--------GYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAF 483
           R  ++            +   EKDG   I +         T E+          AR+   
Sbjct: 510 RYVWKKDNAVITPSSSSRIVVEKDGSLLISQTWSGDIGDYTCEIVSEGGNDSRTARLEVI 569

Query: 484 NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ- 542
              +  PP  +++ ++P                S A  L WV+P   N  ++ Y ++   
Sbjct: 570 ELPH--PPQNLLASLSPS--------------HSHAVVLSWVRPFDGNSPVLHYIVELSE 613

Query: 543 -----SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG---AES 594
                 V  + VGP +           T   ++GL P+  Y+  +    + G G    E+
Sbjct: 614 NNSPWKVHLSDVGPEM-----------TGITVSGLTPARTYQFRVCAVNQVGKGQYSTET 662

Query: 595 KYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWN 651
             L      P   P N+   G T  ++++ W   PE EHN     Y + +R         
Sbjct: 663 SRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLHGYILRYRLAGLPGEHQ 722

Query: 652 QDDVLDWRQSELVLANQPTFQPYEIKV 678
           Q ++     +  ++ +   +  YEI+V
Sbjct: 723 QRNITSPEVNYCLVTDLIIWTQYEIQV 749



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 100/238 (42%), Gaps = 19/238 (7%)

Query: 389 FIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
           F  A A  T+Q VP   P N    + +++      WNP   Q + G  +GYK+  W    
Sbjct: 760 FSRAVAEYTLQGVPTAPPQNVQ-AEAVNSTTVQFLWNPPPQQFINGINQGYKLLAWPADV 818

Query: 448 GEG----SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGV 503
            E     +I            T + KF   +  F  VL F    +GPPS      T E  
Sbjct: 819 PEAVTVLTIAPDFHGIHHGYITNLKKF---TAYFTSVLCFTTPGDGPPSTPQLVWTHEDK 875

Query: 504 PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
           PG V  L    +  ++  + W +P + NG++ GY+I ++       G    RL +  + T
Sbjct: 876 PGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYRISWEV-----YGKNDSRLTHTLNST 930

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVIS 621
           T   K+ GL   T Y I +A  T AG G  +     +    P ++ G    P+NLVIS
Sbjct: 931 THEYKIRGLSSLTTYTIEVAAVTAAGMGLVTTST--ISSGVPPDLPG---APSNLVIS 983



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 125/328 (38%), Gaps = 26/328 (7%)

Query: 90  IIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYF--TVEPEFINAAEEETVTFEC 147
           II  ++  D G Y C V N +G       ++ V     F  T + + ++      +    
Sbjct: 59  IISSLQKHDAGFYRCVVRNRMGALLQRKSEVQVAYMGNFMDTDQRKMVSQGHAAVLNL-L 117

Query: 148 KASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLG--- 204
             +  P P++ W   G  I   P N       N++ I +   SD G Y   A N      
Sbjct: 118 PINSCPRPQVTWFREGHKI--IPSNRIAITLENQLVILSTTASDAGAYYVQAVNERNGEN 175

Query: 205 ----YVYKDVYVNV---LAHAPEITEAPKDEYTVDGKT-VVLTCRVFGAPKPE--VNWIH 254
               +++  +  ++    A AP I  AP +   V G +   L C     P  E  V+W  
Sbjct: 176 KTSPFIHLSIARDMGTPEAMAPVIVVAPGNRSVVAGSSETTLECIASARPVEELSVHWKR 235

Query: 255 NQKELTGGRYTILETGDLKITDVAFADSGEYTCFAR---NKLGTAQGSGSLTVKEHTHIT 311
           N   LT G ++      L I++    D+G Y C A    +    A+    L++ E  + T
Sbjct: 236 NGVRLTSGLHSFGR--RLTISNPTSTDTGLYVCEATLRGSAFEPARAKAFLSIIEPPYFT 293

Query: 312 DQPED-YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTK 370
            +PE    VE  ++    C A+  P   L   W + +  I+    PR+       L + K
Sbjct: 294 AEPESRILVEVEETVDIMCRAMGVPLPTLQ--WYKDAVSINKLQNPRYQVLPSGGLRIQK 351

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTV 398
               DSG + C A  E   I+    L V
Sbjct: 352 LHPEDSGIFQCFASNEGGEIQTHTYLDV 379



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 6/144 (4%)

Query: 401  PLEAPSNFTLIQV--IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVN 458
            P  AP N   IQV  + A +  V+W+P  P+S  G+ +GYK+  W E        ++ V 
Sbjct: 1605 PAMAPQN---IQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYW-EAGNRNETEKMKVL 1660

Query: 459  KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSS 518
                 T ++      +K    + AFN A +GP S+     T +  PG +  L    + S+
Sbjct: 1661 FLPEPTVKLKNLTSHTKYLVSISAFNAAGDGPRSDPRQGRTHQAAPGALSFLAFSEITST 1720

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQ 542
               + W +P   NGVL GY++ Y+
Sbjct: 1721 TLNVSWGEPVAANGVLQGYRVVYE 1744



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 101/275 (36%), Gaps = 29/275 (10%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           APYF  EP       E   +   C A G    E  W+HN   ++             +  
Sbjct: 7   APYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMHNDSELTTYSTE-------YKYI 59

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR-V 242
           I +L+K D G Y C   N +G + +      +A+     +  + +    G   VL    +
Sbjct: 60  ISSLQKHDAGFYRCVVRNRMGALLQRKSEVQVAYMGNFMDTDQRKMVSQGHAAVLNLLPI 119

Query: 243 FGAPKPEVNWIH-NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNK--------- 292
              P+P+V W     K +   R  I     L I     +D+G Y   A N+         
Sbjct: 120 NSCPRPQVTWFREGHKIIPSNRIAITLENQLVILSTTASDAGAYYVQAVNERNGENKTSP 179

Query: 293 ---LGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSE 348
              L  A+  G+        I   P +  V AG S  T  C A + P  +LS+ W R   
Sbjct: 180 FIHLSIARDMGTPEAMAPV-IVVAPGNRSVVAGSSETTLECIASARPVEELSVHWKRNG- 237

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            +   S    + S    LT++  +  D+G Y C A
Sbjct: 238 -VRLTSG---LHSFGRRLTISNPTSTDTGLYVCEA 268



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 12/204 (5%)

Query: 397  TVQVPLE-APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIR 453
            T+Q P + AP++ T ++        + W P+      G+    GY+V+ W       ++ 
Sbjct: 1072 TLQAPPDVAPTSIT-VRTASETSLRLRWVPLPDSQYNGNPESVGYRVKYWRLDLPSSALA 1130

Query: 454  ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEA 512
            +++ ++ E   T +++    ++   ++ AFN    GP SE++   T E VP    +++ A
Sbjct: 1131 QVVNDRLERELT-IEELEEWTEYELQMQAFNAIGAGPWSEVVRGRTRESVPSAAPENVSA 1189

Query: 513  IPLGSSAFYLKWVK-PEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
              + S+   L W   PEQ  NG+++GYKI Y++ K     P   R   +    T SA LA
Sbjct: 1190 EAVSSTQILLTWASVPEQDQNGLILGYKILYRA-KDLDPEP---RTHVVRGNHTQSALLA 1245

Query: 571  GLEPSTKYRIHLAGYTKAGDGAES 594
            GL     Y + +  +T+ G+G  S
Sbjct: 1246 GLRKFVLYELQVLAFTRIGNGVPS 1269



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 93/230 (40%), Gaps = 32/230 (13%)

Query: 391  EAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE 449
            E +A  T+Q VP E P + +      +   ++ W P   +SL G  +GY++  + E + E
Sbjct: 1471 ETEAVTTLQDVPGEPPGSVSATPHTTSS-VLIQWQPPRDESLNGLLQGYRIY-YRELESE 1528

Query: 450  GS-------IRELIVNKGESTTTEVDKFVPAS-----------KNFARVLAFNGAYN--- 488
                     ++     + E T     K V +S           K + R      AYN   
Sbjct: 1529 AGTSPEAKMLKSPSALRAELTAQSSFKTVNSSSTLTTYELTHLKKYRRYEVIMTAYNVIG 1588

Query: 489  -GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSV 544
              P S  +     E  P    Q+++  PL +S   + W    PE  NG + GYKI Y   
Sbjct: 1589 ESPASAPVEVFVGEAAPAMAPQNIQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEA 1648

Query: 545  KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
                    ++ L ++ +PT    KL  L   TKY + ++ +  AGDG  S
Sbjct: 1649 GNRNETEKMKVL-FLPEPT---VKLKNLTSHTKYLVSISAFNAAGDGPRS 1694



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 21/200 (10%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V  Q   G   GYK+  +  KD +   R  +V  
Sbjct: 1179 VPSAAPENVS-AEAVSSTQILLTWASVPEQDQNGLILGYKI-LYRAKDLDPEPRTHVVRG 1236

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNG-PPSEIISFVTPEGVPGTVQSLEAIPLGSS 518
              + +  +           +VLAF    NG P S  I   T +  PG    L    +  +
Sbjct: 1237 NHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSSPFILERTKDDAPGPPVRLVFPEVRLT 1296

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQ-------SVKGTKVGPLLERLPYISDPTTTSAKLAG 571
            +  + W  PE+PNGV++GY+I Y+       +    +VG  + +         T+ +LA 
Sbjct: 1297 SVRIVWQPPEEPNGVILGYQIAYRLASSRPHTFTTVEVGATVRQF--------TATELA- 1347

Query: 572  LEPSTKYRIHLAGYTKAGDG 591
              P + Y   L+  T+ G G
Sbjct: 1348 --PESAYVFRLSAKTRQGWG 1365



 Score = 46.6 bits (109), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 67/166 (40%), Gaps = 8/166 (4%)

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
           TE    +  ++G  +VLTC   G+   E  W+HN  ELT    T        I+ +   D
Sbjct: 12  TEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMHNDSELT----TYSTEYKYIISSLQKHD 67

Query: 282 SGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           +G Y C  RN++G   Q    + V    +  D  +   V  G +A      ++    +  
Sbjct: 68  AGFYRCVVRNRMGALLQRKSEVQVAYMGNFMDTDQRKMVSQGHAAVLNLLPINS-CPRPQ 126

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + W R    I   +  R   + +  L +  ++  D+G Y  +A  E
Sbjct: 127 VTWFREGHKIIPSN--RIAITLENQLVILSTTASDAGAYYVQAVNE 170



 Score = 39.7 bits (91), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 28/216 (12%)

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFVTPEGVPGTVQ-SLEAIPLGSS 518
            ++T   V++  P +    R+ A N   +    SE  +  T + VPG    S+ A P  +S
Sbjct: 1438 DATACAVERLRPFTSYKLRLKATNDIGDSNFSSETEAVTTLQDVPGEPPGSVSATPHTTS 1497

Query: 519  AFYLKWVKP--EQPNGVLMGYKIKYQSVK---GTKVGPLLERLPYI-------------- 559
            +  ++W  P  E  NG+L GY+I Y+ ++   GT     + + P                
Sbjct: 1498 SVLIQWQPPRDESLNGLLQGYRIYYRELESEAGTSPEAKMLKSPSALRAELTAQSSFKTV 1557

Query: 560  -SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYV----PFKNPDNVEGRGS 613
             S  T T+ +L  L+   +Y + +  Y   G+  A +    +V    P   P N++    
Sbjct: 1558 NSSSTLTTYELTHLKKYRRYEVIMTAYNVIGESPASAPVEVFVGEAAPAMAPQNIQVTPL 1617

Query: 614  TPNNLVISWTAMPEIEHNAPHFKYRI-FWRRHNTGE 648
            T + L ++W   P    N     Y+I +W   N  E
Sbjct: 1618 TASQLEVTWDPPPPESQNGNIQGYKIYYWEAGNRNE 1653


>gi|432866114|ref|XP_004070705.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
           [Oryzias latipes]
          Length = 1245

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 192/728 (26%), Positives = 306/728 (42%), Gaps = 84/728 (11%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           + ++V ++ ++++L CI  G P P   W K G  +   D+    N+ K+L +  VE +DQ
Sbjct: 242 QTEKVLMKGEELQLECITAGLPTPDVTWMKMGEKL--PDQAKLSNFNKTLTVSAVEETDQ 299

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP---EFINAAEEETVTFECKASGLPEPE 156
           G Y C+ SN  GE   Y   + V   P +  +P   +      +  V  +C   G P P+
Sbjct: 300 GRYMCKASNSAGETVHY-FHVIVEEPPVWLGDPPQGQITPVGSD--VHIKCSVGGKPPPD 356

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           I W  NG+       N +R V  + + +   +  D+G Y C A+N  G +  ++ + V++
Sbjct: 357 ITWRRNGELFRDDSENNKR-VLDDTVVLHKAKSQDSGVYQCEASNPHGRILANINILVMS 415

Query: 217 HAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD-LKI 274
             P+I      EY V  G  +V+ C VF +P   ++WI  +  +TG R++  +    LKI
Sbjct: 416 KPPQILTKDVQEYAVILGDNIVINCSVFSSPPASISWIKEEAVITGERFSTFDNNQSLKI 475

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
            +   +DSG+Y C  +N  GT+  +  L VK+ T I   PE+ ++  G SA   C    D
Sbjct: 476 INAEESDSGKYECVVKNTEGTSSITALLDVKDPTKIVSPPENKQIIIGTSAKLVCKVTYD 535

Query: 335 PSLKLSIV--WLRGSEPIDF--ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
            SL+ S V  W +  E I    E+  R+++  D++L +   +  D G YTC A+T LD +
Sbjct: 536 KSLEGSFVMEWRKDGEEILLSEENSSRYIR-GDHNLQIMNVNLRDQGMYTCIARTSLDEV 594

Query: 391 EAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQ--SLRGHFRGYKVQTWTEKDG 448
            A A + V    +AP    +I++ D++  V+SW P S    S+      Y+   W     
Sbjct: 595 RATALIIVLDVPDAPERLKIIEIKDSRNIVISWKPGSDHNSSVTEFVVEYEENQWE---- 650

Query: 449 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-----ISFVTPEGV 503
            G  +EL    G   T E+  +      F RV A N    GPPSE           P+  
Sbjct: 651 PGGWKELKRVPGNQATAELALYGNLRYQF-RVYAVNAIGPGPPSEPSERHNTDPTVPDRN 709

Query: 504 PGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGP--LLERLPYI 559
           P  ++    IP       + W  + P + NG  + YK+ Y+ +K        L++R  Y+
Sbjct: 710 PENIKIQGHIPY---QMEISWDPLLPTESNGPGLEYKVSYRRLKVEDAWTEYLVQRPSYV 766

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGST 614
            + T   A          Y I +      G   E K +        P   P +V      
Sbjct: 767 VNGTPAFA---------PYEIKVQARNSFGWAPEPKVVTGYSGEDRPATAPQDVAVEVIN 817

Query: 615 PNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPY 674
              L +SWT +P          Y + W R  T    + + +L+ +QS             
Sbjct: 818 TTALRVSWTQVPPATVRGHLGGYEVHWVR--TRSFLDPEKILNEKQS------------- 862

Query: 675 EIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 734
                               +   G  +   V    P S+    V  FN   NGP S+ +
Sbjct: 863 --------------------MSFPGNGSYAIVPGLKPYSEYKLTVRVFNSKGNGPTSDPV 902

Query: 735 SFVTPEGG 742
           +F TPEG 
Sbjct: 903 TFSTPEGA 910



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 92/196 (46%), Gaps = 6/196 (3%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV---QTWTEKDGEGSIREL-- 455
           P  AP +   ++VI+     VSW  V P ++RGH  GY+V   +T +  D E  + E   
Sbjct: 804 PATAPQDVA-VEVINTTALRVSWTQVPPATVRGHLGGYEVHWVRTRSFLDPEKILNEKQS 862

Query: 456 IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPL 515
           +   G  +   V    P S+    V  FN   NGP S+ ++F TPEG PG +  L     
Sbjct: 863 MSFPGNGSYAIVPGLKPYSEYKLTVRVFNSKGNGPTSDPVTFSTPEGAPGLLPILTTSDY 922

Query: 516 GSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
            S +  L W  P   NG+L GY ++Y  +  + +  +      I+    T  +L GL   
Sbjct: 923 KSDSVLLVWGPPLATNGILSGYLLQYHLLNESTLEVIDSHEINITGADITQWQLTGLNSG 982

Query: 576 TKYRIHLAGYTKAGDG 591
           ++YRIHL   TKA  G
Sbjct: 983 SRYRIHLRACTKASCG 998



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 147/380 (38%), Gaps = 41/380 (10%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDGVPIN-------PSDRISQGNYGKSLIIKHVEFSDQG 100
           +  V + C   G P P   W+KDG  +         SD  S      S+ ++ VE    G
Sbjct: 48  DNSVTITCQARGNPPPTYKWTKDGKDVTLSNIASIASDPTSGTLRFHSMPLRQVE----G 103

Query: 101 SYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKASGLPEP-E 156
            Y C  SN +G A +  I++ V A P F   T+ P  +N  E E+V  EC       P +
Sbjct: 104 KYKCFASNQLGTAMTVDIEIIVSALPKFPRETIPPVIVN--EGESVILECNPPEAVAPRQ 161

Query: 157 IHWVHNGKPISQAPPNPRRKVGP--NRITIENLRKSDTGNYGCNAT--NSLGYVYKDVYV 212
           ++W+  G  +     + R  +G   N      L++    +Y C+A        V K    
Sbjct: 162 LYWMTIG--LEHIKQDKRVSMGTDGNLYFSNALQRDSRQDYCCSAAFPRIRTMVQKSPMA 219

Query: 213 NVLAHAPE-ITEAPK---------DEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG 262
            V+  + E IT AP          ++  + G+ + L C   G P P+V W+   ++L   
Sbjct: 220 LVVVKSSEFITRAPSMLLPSGVQTEKVLMKGEELQLECITAGLPTPDVTWMKMGEKLPDQ 279

Query: 263 RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHITDQPEDYEVEA 321
                    L ++ V   D G Y C A N  G       + V+E    + D P+      
Sbjct: 280 AKLSNFNKTLTVSAVEETDQGRYMCKASNSAGETVHYFHVIVEEPPVWLGDPPQGQITPV 339

Query: 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPI--DFESEPRFVQSNDYSLTVTKSSELDSGQY 379
           G     +C+    P     I W R  E    D E+  R +   D ++ + K+   DSG Y
Sbjct: 340 GSDVHIKCSVGGKPP--PDITWRRNGELFRDDSENNKRVL---DDTVVLHKAKSQDSGVY 394

Query: 380 TCRAQTELDFIEAQATLTVQ 399
            C A      I A   + V 
Sbjct: 395 QCEASNPHGRILANINILVM 414



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 131/615 (21%), Positives = 231/615 (37%), Gaps = 100/615 (16%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
           V + C  GG P P   W ++G         ++     ++++   +  D G Y CE SN  
Sbjct: 343 VHIKCSVGGKPPPDITWRRNGELFRDDSENNKRVLDDTVVLHKAKSQDSGVYQCEASNPH 402

Query: 111 GEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQ 168
           G   + +I++ V++ P    T + +       + +   C     P   I W+     I+ 
Sbjct: 403 GRILA-NINILVMSKPPQILTKDVQEYAVILGDNIVINCSVFSSPPASISWIKEEAVIT- 460

Query: 169 APPNPRRKVGPNR--ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
                R     N   + I N  +SD+G Y C   N+ G       ++V     +I   P+
Sbjct: 461 ---GERFSTFDNNQSLKIINAEESDSGKYECVVKNTEGTSSITALLDV-KDPTKIVSPPE 516

Query: 227 DEYTVDGKTVVLTCRVFGAPKPE----VNWIHNQKEL-----TGGRYTILETGDLKITDV 277
           ++  + G +  L C+V      E    + W  + +E+        RY I    +L+I +V
Sbjct: 517 NKQIIIGTSAKLVCKVTYDKSLEGSFVMEWRKDGEEILLSEENSSRY-IRGDHNLQIMNV 575

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
              D G YTC AR  L   + +  + V +   + D PE                      
Sbjct: 576 NLRDQGMYTCIARTSLDEVRATALIIVLD---VPDAPE---------------------- 610

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTK-SSELDSGQYTCRAQTELDFI---EAQ 393
           +L I+ ++ S  I    +P     +D++ +VT+   E +  Q+      EL  +   +A 
Sbjct: 611 RLKIIEIKDSRNIVISWKP----GSDHNSSVTEFVVEYEENQWEPGGWKELKRVPGNQAT 666

Query: 394 ATLTV--------------------------------QVPLEAPSNFTLIQVIDAKKAVV 421
           A L +                                 VP   P N   IQ     +  +
Sbjct: 667 AELALYGNLRYQFRVYAVNAIGPGPPSEPSERHNTDPTVPDRNPENIK-IQGHIPYQMEI 725

Query: 422 SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 481
           SW+P+ P    G    YKV ++     E +  E +V +          F P      +V 
Sbjct: 726 SWDPLLPTESNGPGLEYKV-SYRRLKVEDAWTEYLVQRPSYVVNGTPAFAPYE---IKVQ 781

Query: 482 AFNGAYNGPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYK 538
           A N     P  ++++  + E  P T  Q +    + ++A  + W  V P    G L GY+
Sbjct: 782 ARNSFGWAPEPKVVTGYSGEDRPATAPQDVAVEVINTTALRVSWTQVPPATVRGHLGGYE 841

Query: 539 IKYQSVKGTKVGP--LLERLPYISDPTTTS-AKLAGLEPSTKYRIHLAGYTKAGDGAESK 595
           + +   + + + P  +L     +S P   S A + GL+P ++Y++ +  +   G+G  S 
Sbjct: 842 VHWVRTR-SFLDPEKILNEKQSMSFPGNGSYAIVPGLKPYSEYKLTVRVFNSKGNGPTSD 900

Query: 596 YLFYVPFKNPDNVEG 610
               V F  P+   G
Sbjct: 901 ---PVTFSTPEGAPG 912


>gi|47220665|emb|CAG06587.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2095

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 179/614 (29%), Positives = 269/614 (43%), Gaps = 41/614 (6%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           R   V     +V + C+    PL +   +W K+GV +  S  +S  ++ + L I     S
Sbjct: 62  RNTSVVTGTSEVTMECVANARPLIKLSIVWRKNGVLV--SGGLS--DFSRRLTIFGPALS 117

Query: 98  DQGSYTCEVSNGVGEAKSYSID--LSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPE 154
           D G Y CE         S S    L V   P F  EPE  I A  E+ V   C+A G P+
Sbjct: 118 DAGYYECEAILRSSSVPSVSAGAYLHVYEPPQFIKEPEKHITAEMEKVVDIPCQARGTPQ 177

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
           P+I W  +  PI        R +    + +  L   DTG + C A N  G V  + Y+ V
Sbjct: 178 PDIVWYKDALPIDPVKMLRYRVLVGGSLQVNGLLPDDTGMFQCFARNVAGEVQTNTYLAV 237

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILET 269
            + AP IT  P D   +DG +++L C   GAP+P + W   ++ L  G     R+T+LE+
Sbjct: 238 TSIAPNITAGPSDSTVIDGMSIILHCETSGAPRPAITWQKGERVLASGSVQLPRFTLLES 297

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L I+    +D+G YTC A N  G  + +  L V   T IT  P+D  V  G  A   C
Sbjct: 298 GSLLISPSHISDAGTYTCMASNSRGIDEAAADLVVWARTRITTPPQDQSVIKGTKAFMTC 357

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
               DPS+ +  +W +    I+ ++ PR     D +L ++++   D G YTCR  +    
Sbjct: 358 GVTHDPSVTVKHIWEKEGTAINVQAIPRMRTDPDGTLHISQTWSGDIGTYTCRVTSVGGN 417

Query: 390 IEAQATLTVQVPL---------EAPSNFTLIQVIDAKKAV-VSWNPVSPQSLRGHFRGYK 439
               A L V  P+           P N T +     K+A+ ++W    P         Y 
Sbjct: 418 DSRSAHLRVSCPVPPYPRRQLPHPPENPTAVLSTSEKRAINLAW--AKPFDGNSPLIRYI 475

Query: 440 VQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           ++  +E +   +I  L   + EST   V+  +PA     R+ A N    G  S+    V+
Sbjct: 476 LEV-SENNAPWAIL-LASIEPESTEVTVNGLIPARSYQFRLCAVNDVGKGQFSKETDRVS 533

Query: 500 -PEGVPGT-VQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLER 555
            PE  P    Q++ A    + +  ++W  P +   NG+L GY ++Y+ + G    P+  +
Sbjct: 534 LPEEPPSAPPQNVIASGRTNQSIMIQWQPPPESHQNGILRGYVVRYR-LTGL---PVDYQ 589

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEG 610
           L  IS P  T+  L  L   T Y I +A +  AG GA S       L  VP   P NV+ 
Sbjct: 590 LKNISSPDVTNLLLEDLIIWTNYEIEVAAFNGAGLGAFSHKVTEWTLQGVPTIAPGNVQA 649

Query: 611 RGSTPNNLVISWTA 624
                  +  +WTA
Sbjct: 650 EAVNSTTIRFTWTA 663



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 141/562 (25%), Positives = 212/562 (37%), Gaps = 44/562 (7%)

Query: 143 VTFECKASGLP--EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
           VT EC A+  P  +  I W  NG  +S    +  R     R+TI     SD G Y C A 
Sbjct: 73  VTMECVANARPLIKLSIVWRKNGVLVSGGLSDFSR-----RLTIFGPALSDAGYYECEAI 127

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+  V    Y++V    P+  + P+   T + + VV + C+  G P+P++ W  + 
Sbjct: 128 LRSSSVPSVSAGAYLHVY-EPPQFIKEPEKHITAEMEKVVDIPCQARGTPQPDIVWYKDA 186

Query: 257 ---KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHITD 312
                +   RY +L  G L++  +   D+G + CFARN  G  Q +  L V     +IT 
Sbjct: 187 LPIDPVKMLRYRVLVGGSLQVNGLLPDDTGMFQCFARNVAGEVQTNTYLAVTSIAPNITA 246

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTK 370
            P D  V  G S    C     P  + +I W +G   +   S   PRF      SL ++ 
Sbjct: 247 GPSDSTVIDGMSIILHCETSGAP--RPAITWQKGERVLASGSVQLPRFTLLESGSLLISP 304

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQS 430
           S   D+G YTC A       EA A L V       +      VI   KA ++       S
Sbjct: 305 SHISDAGTYTCMASNSRGIDEAAADLVVWARTRITTPPQDQSVIKGTKAFMTCGVTHDPS 364

Query: 431 L--------RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLA 482
           +         G     +       D +G++       G+  T    +      N +R   
Sbjct: 365 VTVKHIWEKEGTAINVQAIPRMRTDPDGTLHISQTWSGDIGTYTC-RVTSVGGNDSRSAH 423

Query: 483 FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
              +   PP        P   P  V S         A  L W KP   N  L+ Y ++  
Sbjct: 424 LRVSCPVPPYPRRQLPHPPENPTAVLSTSE----KRAINLAWAKPFDGNSPLIRYILEV- 478

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-- 600
           S        LL  +    +P +T   + GL P+  Y+  L      G G  SK    V  
Sbjct: 479 SENNAPWAILLASI----EPESTEVTVNGLIPARSYQFRLCAVNDVGKGQFSKETDRVSL 534

Query: 601 ----PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVL 656
               P   P NV   G T  +++I W   PE   N     Y + +R       +   ++ 
Sbjct: 535 PEEPPSAPPQNVIASGRTNQSIMIQWQPPPESHQNGILRGYVVRYRLTGLPVDYQLKNIS 594

Query: 657 DWRQSELVLANQPTFQPYEIKV 678
               + L+L +   +  YEI+V
Sbjct: 595 SPDVTNLLLEDLIIWTNYEIEV 616



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 143/598 (23%), Positives = 222/598 (37%), Gaps = 85/598 (14%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSN 108
           L C   G P P   W K G  +  S  +    +      SL+I     SD G+YTC  SN
Sbjct: 261 LHCETSGAPRPAITWQK-GERVLASGSVQLPRFTLLESGSLLISPSHISDAGTYTCMASN 319

Query: 109 --GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--WVHNGK 164
             G+ EA +   DL V A    T  P+  +  +       C  +  P   +   W   G 
Sbjct: 320 SRGIDEAAA---DLVVWARTRITTPPQDQSVIKGTKAFMTCGVTHDPSVTVKHIWEKEGT 376

Query: 165 PIS-QAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-------- 214
            I+ QA   PR +  P+  + I      D G Y C  T+  G   +  ++ V        
Sbjct: 377 AINVQA--IPRMRTDPDGTLHISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVSCPVPPYP 434

Query: 215 ---LAHAPEITEAPKDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTIL--- 267
              L H PE   A     T + + + L   + F    P + +I    E       +L   
Sbjct: 435 RRQLPHPPENPTAVLS--TSEKRAINLAWAKPFDGNSPLIRYILEVSENNAPWAILLASI 492

Query: 268 --ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS- 324
             E+ ++ +  +  A S ++   A N +G  Q S      + T     PE+      Q+ 
Sbjct: 493 EPESTEVTVNGLIPARSYQFRLCAVNDVGKGQFS------KETDRVSLPEEPPSAPPQNV 546

Query: 325 -ATFRCNAVSDPSLKLSIVW-----------LRG--------SEPIDFE----SEPRFVQ 360
            A+ R N        + I W           LRG          P+D++    S P    
Sbjct: 547 IASGRTNQ------SIMIQWQPPPESHQNGILRGYVVRYRLTGLPVDYQLKNISSPDVTN 600

Query: 361 SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV 420
                L +  + E++   +             + TL   VP  AP N    + +++    
Sbjct: 601 LLLEDLIIWTNYEIEVAAFNGAGLGAFSHKVTEWTLQ-GVPTIAPGNVQ-AEAVNSTTIR 658

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR- 479
            +W   +PQ + G  +GYK+ TW E   +  +  +IV      +  V  +V   K F   
Sbjct: 659 FTWTAPNPQFINGINQGYKLLTW-EPRKDKDVTMVIVRPNFQDSVHVG-YVTGLKKFTEY 716

Query: 480 ---VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMG 536
              VL F    +GP S   +  T E  PG V  L    +  ++  + W +P + NGVL G
Sbjct: 717 YTSVLCFTTPGDGPRSPPRAARTHEDTPGAVGHLSFTEILDTSLKVSWSEPSEKNGVLTG 776

Query: 537 YKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           Y+I ++    T       R+ +     T   ++ GL   T Y I +AG T  G G  S
Sbjct: 777 YRISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAGMTSKGQGLLS 829



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 73/181 (40%), Gaps = 18/181 (9%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW--TEKDGEGSIRELIV 457
            VP   P N   IQ   A +  V+W+P    +  G  +GYKV  W    K+    +R L +
Sbjct: 1527 VPTAPPQNVA-IQSATATQLDVTWDPPPVDAQNGDIQGYKVYFWEFQRKNETERLRTLFM 1585

Query: 458  NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP--- 514
             +G     ++      +     V  FN A +GP S        EG P      + +P   
Sbjct: 1586 PEG---GVKLKNLTGYTTYMISVAPFNAAGDGPRSR-----RQEGAPSKQVCTDGVPSFI 1637

Query: 515  ----LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
                L +++  + W +P  PNG++ GY++ Y+        P     P +S   T   K +
Sbjct: 1638 HFSELTTTSVNVSWGEPAFPNGIIEGYRLVYEPCAPADECPDSPSPPGVSKTVTVDMKGS 1697

Query: 571  G 571
            G
Sbjct: 1698 G 1698



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 83/199 (41%), Gaps = 11/199 (5%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIRELIVN 458
            P  AP+N TL +        + W P+      G+    GY+VQ          +  +I +
Sbjct: 975  PDMAPANVTL-RTASETSLWLRWMPLPEWEYNGNAEQVGYRVQYSRAGAPSRPLIHIITD 1033

Query: 459  KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGT-VQSLEAIPLGS 517
            + E   T ++      +   RV A NG   GP S+ +   T E VP     ++ A    S
Sbjct: 1034 RQEREFT-IEDLEEWMEYEVRVQALNGIGAGPWSQPVRGRTRESVPSCGPTNVSAFATTS 1092

Query: 518  SAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
            S+  ++W++   P  NG+++GYK+ Y+                +    T S +L GL   
Sbjct: 1093 SSILVRWLEVPDPDRNGLILGYKVVYKEKDSDSAVHFWT----VDGNATHSVQLTGLGKY 1148

Query: 576  TKYRIHLAGYTKAGDGAES 594
              Y I +  +T+ GDG  S
Sbjct: 1149 VLYEIQVLAFTRMGDGRPS 1167



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 83/199 (41%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N +      +   +V W  V      G   GYKV  + EKD + ++    V+ 
Sbjct: 1077 VPSCGPTNVSAFATT-SSSILVRWLEVPDPDRNGLILGYKV-VYKEKDSDSAVHFWTVDG 1134

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              + + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1135 NATHSVQLTGLGKYVLYEIQVLAFTRMGDGRPSAPPILERTLDDVPGPPVGILFPEVRTT 1194

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P +PNG+++ Y+I Y           ++ L    +P+     +  L+P + Y
Sbjct: 1195 SVRLIWQSPSEPNGIILAYQITYHHNSTNSNTATVDVL----NPSARQYTVTNLKPESVY 1250

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1251 VFRITAQTRKGWGEAAEAL 1269



 Score = 44.3 bits (103), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 93/242 (38%), Gaps = 42/242 (17%)

Query: 500  PEGVPGTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLERL- 556
            P+ VP     L   P  +++  + W  P  E+ NG+L+G++I+Y+ +       L +RL 
Sbjct: 1407 PDEVPAI---LSVTPHTTTSVLICWKPPSEEKINGILLGFRIRYREL-------LYDRLR 1456

Query: 557  ------------------PY----ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
                              PY    ++D +    +L  L    +Y I ++ Y   G+G  S
Sbjct: 1457 GYSAHAISSISAWADLSAPYSIRNLTDSSLIQYELDKLSKHKRYEIRMSVYNAVGEGPSS 1516

Query: 595  --KYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI-FWRRHNTGE 648
              + +F    VP   P NV  + +T   L ++W   P    N     Y++ FW      E
Sbjct: 1517 PPQEVFVGEAVPTAPPQNVAIQSATATQLDVTWDPPPVDAQNGDIQGYKVYFWEFQRKNE 1576

Query: 649  AWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDK 708
               +   L   +  + L N   +  Y I V       DG  S R+      +  T  V  
Sbjct: 1577 T-ERLRTLFMPEGGVKLKNLTGYTTYMISVAPFNAAGDGPRSRRQEGAPSKQVCTDGVPS 1635

Query: 709  FV 710
            F+
Sbjct: 1636 FI 1637



 Score = 40.8 bits (94), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 57/267 (21%), Positives = 96/267 (35%), Gaps = 41/267 (15%)

Query: 354  SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-VPLEAPSNFTLIQ 412
            S  R      Y   V  ++++   +Y+          E++A  T+Q  P E P+  + + 
Sbjct: 1368 SSDRLKPFTSYQFRVKATNDIGDSEYSA---------ESEAITTLQDAPDEVPAILS-VT 1417

Query: 413  VIDAKKAVVSWNPVSPQSLRGHFRGYKVQ---------------------TWTEKDGEGS 451
                   ++ W P S + + G   G++++                      W +     S
Sbjct: 1418 PHTTTSVLICWKPPSEEKINGILLGFRIRYRELLYDRLRGYSAHAISSISAWADLSAPYS 1477

Query: 452  IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVP-GTVQSL 510
            IR L          E+DK     +   R+  +N    GP S        E VP    Q++
Sbjct: 1478 IRNL--TDSSLIQYELDKLSKHKRYEIRMSVYNAVGEGPSSPPQEVFVGEAVPTAPPQNV 1535

Query: 511  EAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
                  ++   + W  P  +  NG + GYK+ +   +        ERL  +  P     K
Sbjct: 1536 AIQSATATQLDVTWDPPPVDAQNGDIQGYKVYFWEFQRKNE---TERLRTLFMPEG-GVK 1591

Query: 569  LAGLEPSTKYRIHLAGYTKAGDGAESK 595
            L  L   T Y I +A +  AGDG  S+
Sbjct: 1592 LKNLTGYTTYMISVAPFNAAGDGPRSR 1618


>gi|426255462|ref|XP_004021367.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-1 [Ovis aries]
          Length = 2344

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 188/627 (29%), Positives = 273/627 (43%), Gaps = 48/627 (7%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
           + V   + +  L CI    P+ +    W ++G+      R++ G  ++G+ L I +   S
Sbjct: 280 RSVVAGSSETTLECIASARPVQELSVTWKRNGM------RVTSGLHSFGRRLTISNPTSS 333

Query: 98  DQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPE 154
           D G Y CE +      E       LS++  PYFTVEP+  I A  EE V   C+A G+P 
Sbjct: 334 DTGMYVCEAALPGSTFEPARAKAFLSIIEPPYFTVEPKSRILAEVEENVDIVCEAMGVPP 393

Query: 155 PEIHWVHNGKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P + W  +   I+    NPR +V     + +  LR  D+G + C A+N+ G V    Y++
Sbjct: 394 PALRWFKDAVSINMLQ-NPRYQVLAGGGLRVRQLRPEDSGIFQCLASNAGGEVQTHTYLD 452

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V   AP  T+ P D    DG T VL C V GAP+P + W      L  G     R+ +LE
Sbjct: 453 VTNVAPAFTQLPVDTTVTDGMTAVLRCEVSGAPRPAIVWSRGSHILASGSVRIPRFMLLE 512

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L+I  V   D+G YTC A N  G+   S +LTV   T I   PED  V  G +AT  
Sbjct: 513 SGGLQIAPVFIQDAGNYTCHAANSEGSLNASATLTVWNRTSIVTPPEDLVVIKGTTATLH 572

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A  DP + L  VW + +  I   S  R V   D SL ++++   D G YTC   +E  
Sbjct: 573 CGATHDPRISLRYVWKKDNVVIAPSSSSRVVVEKDGSLLISQTWSGDIGDYTCGVISEGG 632

Query: 389 FIEAQATLTVQVPLEAPSNFTL-IQVIDAKKAVVSWNPVSPQSLRGHFRG-----YKVQT 442
                A L V     +P N    +        V+SW  V P      F G     Y +  
Sbjct: 633 NDSRTARLEVIELPHSPQNLVASLTPAHGHAVVLSW--VRP------FDGNSPVLYYIVE 684

Query: 443 WTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPE 501
            +E +    +    V+  E T+  V    PA     RV A N    G  S E    + PE
Sbjct: 685 LSENNSPWKVHLSDVSP-EMTSVTVRGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPE 743

Query: 502 GVPGT-VQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPY 558
             P    +++ A    + +  ++W  P +P  NG L GY ++Y+ + G   G   +R   
Sbjct: 744 EPPSAPPKNIVASGRTNQSIMVQWQPPPEPEHNGALRGYVLRYR-LAGLP-GEYQQR--N 799

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEGRGS 613
           IS P  +   +  L   T+Y I +A Y  AG G  S+      L  VP   P NV+    
Sbjct: 800 ISSPEVSYCLVTELIVWTQYEIQVAAYNGAGLGVFSRAVAEYTLQGVPTAPPQNVQVEAV 859

Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIF 640
               +   W   P+   N  +  Y++ 
Sbjct: 860 NSTTIQFLWNPPPQQFINGINQGYKLL 886



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 152/609 (24%), Positives = 228/609 (37%), Gaps = 83/609 (13%)

Query: 115 SYSIDLSV-------LAAPYFTVEP--EFINAAEEETVTFECKASGLP--EPEIHWVHNG 163
           S+ I LS+         AP   V P    + A   ET T EC AS  P  E  + W  NG
Sbjct: 253 SFFIHLSIRDAGTPEAMAPVIVVPPSNRSVVAGSSET-TLECIASARPVQELSVTWKRNG 311

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT---NSLGYVYKDVYVNVLAHAPE 220
             ++          G  R+TI N   SDTG Y C A    ++        +++++   P 
Sbjct: 312 MRVTSG----LHSFG-RRLTISNPTSSDTGMYVCEAALPGSTFEPARAKAFLSII-EPPY 365

Query: 221 ITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITD 276
            T  PK     +  + V + C   G P P + W  +      L   RY +L  G L++  
Sbjct: 366 FTVEPKSRILAEVEENVDIVCEAMGVPPPALRWFKDAVSINMLQNPRYQVLAGGGLRVRQ 425

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           +   DSG + C A N  G  Q    L V       T  P D  V  G +A  RC     P
Sbjct: 426 LRPEDSGIFQCLASNAGGEVQTHTYLDVTNVAPAFTQLPVDTTVTDGMTAVLRCEVSGAP 485

Query: 336 SLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393
             + +IVW RGS  +   S   PRF+      L +      D+G YTC A      + A 
Sbjct: 486 --RPAIVWSRGSHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCHAANSEGSLNAS 543

Query: 394 ATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
           ATLTV        N T I        V+     +      H     ++   +KD      
Sbjct: 544 ATLTVW-------NRTSIVTPPEDLVVIKGTTATLHCGATHDPRISLRYVWKKD------ 590

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG----------- 502
            +++    S+   V+K           L  +  ++G   +    V  EG           
Sbjct: 591 NVVIAPSSSSRVVVEK--------DGSLLISQTWSGDIGDYTCGVISEGGNDSRTARLEV 642

Query: 503 --VPGTVQSLEA--IPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERLP 557
             +P + Q+L A   P    A  L WV+P   N  ++ Y ++        KV        
Sbjct: 643 IELPHSPQNLVASLTPAHGHAVVLSWVRPFDGNSPVLYYIVELSENNSPWKV-------- 694

Query: 558 YISD--PTTTSAKLAGLEPSTKYRIHLAGYTKAGDG---AESKYLFYV---PFKNPDNVE 609
           ++SD  P  TS  + GL P+  Y+  +    + G G    E+  L      P   P N+ 
Sbjct: 695 HLSDVSPEMTSVTVRGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIV 754

Query: 610 GRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQP 669
             G T  ++++ W   PE EHN     Y + +R       + Q ++     S  ++    
Sbjct: 755 ASGRTNQSIMVQWQPPPEPEHNGALRGYVLRYRLAGLPGEYQQRNISSPEVSYCLVTELI 814

Query: 670 TFQPYEIKV 678
            +  YEI+V
Sbjct: 815 VWTQYEIQV 823



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 122/516 (23%), Positives = 187/516 (36%), Gaps = 46/516 (8%)

Query: 53  LFCIFGGTPLPQTIWSKDG-VPINPSDRISQGNYGKS--LIIKHVEFSDQGSYTCEVSNG 109
           L C   G P P  +WS+   +  + S RI +    +S  L I  V   D G+YTC  +N 
Sbjct: 477 LRCEVSGAPRPAIVWSRGSHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCHAANS 536

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G   + S  L+V         PE +   +  T T  C A+  P   + +V     +  A
Sbjct: 537 EGSLNA-SATLTVWNRTSIVTPPEDLVVIKGTTATLHCGATHDPRISLRYVWKKDNVVIA 595

Query: 170 PPNPRRKV--GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAPEITEAP 225
           P +  R V      + I      D G+Y C   +  G   +   + V  L H+P+   A 
Sbjct: 596 PSSSSRVVVEKDGSLLISQTWSGDIGDYTCGVISEGGNDSRTARLEVIELPHSPQNLVA- 654

Query: 226 KDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAF----- 279
                  G  VVL+  R F    P + +I    E        L     ++T V       
Sbjct: 655 -SLTPAHGHAVVLSWVRPFDGNSPVLYYIVELSENNSPWKVHLSDVSPEMTSVTVRGLTP 713

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYE----VEAG---QSATFRCNAV 332
           A + ++   A N++G  Q S   T      + ++P        V +G   QS   +    
Sbjct: 714 ARTYQFRVCAVNQVGKGQYS---TETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPP 770

Query: 333 SDPS---------LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            +P          L+  +  L G       S P         L V    E+    Y    
Sbjct: 771 PEPEHNGALRGYVLRYRLAGLPGEYQQRNISSPEVSYCLVTELIVWTQYEIQVAAYNGAG 830

Query: 384 QTELDFIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT 442
                F  A A  T+Q VP   P N   ++ +++      WNP   Q + G  +GYK+  
Sbjct: 831 LGV--FSRAVAEYTLQGVPTAPPQNVQ-VEAVNSTTIQFLWNPPPQQFINGINQGYKLLA 887

Query: 443 WTEKDGEG----SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
           W +   E     +I            T + KF   +  F  VL F    +GPPS      
Sbjct: 888 WPDDVPEAVTVVTIAPDFHGVHHGYITNLKKF---TAYFTSVLCFTTPGDGPPSTPQLIW 944

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
           T E  PG V  L    +  ++  + W +P + NG++
Sbjct: 945 THEDKPGAVGHLSFTEILDTSLKVSWQEPLEKNGII 980



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 3/144 (2%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V  Q   G   GYK+  +  KD +   R  +V  
Sbjct: 1352 VPSAAPENVS-AEAVSSTQILLTWASVPEQDQNGLILGYKI-LFRAKDLDPEPRSHVVRG 1409

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              + +  +           +VLAF    NG PS   I   T +  PG    L    +  +
Sbjct: 1410 NHTQSALLAGLGKFVLYELQVLAFTRIGNGVPSAPPILERTKDDAPGPPVRLVFPEVRLT 1469

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQ 542
            +  + W  PE+PNG+++GY+I Y+
Sbjct: 1470 SVRIVWQPPEEPNGIILGYQIAYR 1493



 Score = 46.2 bits (108), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 51/130 (39%), Gaps = 6/130 (4%)

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
           TE    +  ++G  +VLTC   G+   E  W HN  ELT    T        I  +   D
Sbjct: 28  TEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWTHNDSELT----TYTSEYKYVIPSLQRLD 83

Query: 282 SGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           +G Y C  RN++G   Q    + V      TD  E   V  G++A      +S    +  
Sbjct: 84  AGFYRCIVRNRMGALLQRRSEVQVAYMGDFTDAEERRVVSEGRAAVLSLPPISS-CPRPQ 142

Query: 341 IVWLRGSEPI 350
           + W R    I
Sbjct: 143 VTWFRDGHKI 152



 Score = 45.8 bits (107), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 12/204 (5%)

Query: 397  TVQVPLE-APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIR 453
            T+Q P + AP++ T ++        + W P+      G+    GY+V+ W          
Sbjct: 1245 TLQAPPDVAPTSIT-VRTASETSLRLRWVPLPDSQYNGNPESVGYRVKWWCPDLPSVVQT 1303

Query: 454  ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEA 512
            ++I ++ E   T V+     ++   ++ AFN    GP S  +   T E VP    +++ A
Sbjct: 1304 QVISDRLEREFT-VEGLEEWTEYALQMQAFNAIGAGPWSAAVRGRTRESVPSAAPENVSA 1362

Query: 513  IPLGSSAFYLKWVK-PEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
              + S+   L W   PEQ  NG+++GYKI +++ K     P   R   +    T SA LA
Sbjct: 1363 EAVSSTQILLTWASVPEQDQNGLILGYKILFRA-KDLDPEP---RSHVVRGNHTQSALLA 1418

Query: 571  GLEPSTKYRIHLAGYTKAGDGAES 594
            GL     Y + +  +T+ G+G  S
Sbjct: 1419 GLGKFVLYELQVLAFTRIGNGVPS 1442



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 113/283 (39%), Gaps = 38/283 (13%)

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSI---RELIV-----NKGESTTTEVDKFVP 472
            +SP+S    FR GY  +T    W  +   G++    E +      N+ ++   E+    P
Sbjct: 1158 ISPRSATLQFRPGYDGKTAISRWIVQGQVGAVGDEEEWVTLCEEENEPDAQMLEIPDLTP 1217

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ--SLEAIPLGSSAFYLKWVK-PE- 528
             +    R+   N    GP S+    +     P  V   S+       ++  L+WV  P+ 
Sbjct: 1218 YTHYRFRMRQVNVVGAGPFSQSSRVIQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDS 1277

Query: 529  QPNG--VLMGYKIKY-----QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIH 581
            Q NG    +GY++K+      SV  T+V         ISD       + GLE  T+Y + 
Sbjct: 1278 QYNGNPESVGYRVKWWCPDLPSVVQTQV---------ISDRLEREFTVEGLEEWTEYALQ 1328

Query: 582  LAGYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
            +  +   G G  S  +       VP   P+NV     +   ++++W ++PE + N     
Sbjct: 1329 MQAFNAIGAGPWSAAVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILG 1388

Query: 637  YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVV 679
            Y+I +R  +         V        +LA    F  YE++V+
Sbjct: 1389 YKILFRAKDLDPEPRSHVVRGNHTQSALLAGLGKFVLYELQVL 1431



 Score = 44.3 bits (103), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 55/136 (40%), Gaps = 9/136 (6%)

Query: 126 PYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
           PYF  EP       E   +   C A G    E  W HN   ++             +  I
Sbjct: 24  PYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWTHNDSELTT-------YTSEYKYVI 76

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RVF 243
            +L++ D G Y C   N +G + +      +A+  + T+A +     +G+  VL+   + 
Sbjct: 77  PSLQRLDAGFYRCIVRNRMGALLQRRSEVQVAYMGDFTDAEERRVVSEGRAAVLSLPPIS 136

Query: 244 GAPKPEVNWIHNQKEL 259
             P+P+V W  +  ++
Sbjct: 137 SCPRPQVTWFRDGHKI 152


>gi|334348529|ref|XP_003342072.1| PREDICTED: neuronal cell adhesion molecule [Monodelphis domestica]
          Length = 1186

 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/368 (36%), Positives = 190/368 (51%), Gaps = 16/368 (4%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           LR   + L CI  G P P   W+K DG +PIN   R    N+ K+L I HV  +D G Y 
Sbjct: 258 LRENVLSLECIAEGLPTPSINWTKEDGELPIN---RTFYKNFKKTLNIIHVSEADSGKYK 314

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G  + ++I ++V AAPY+   P  +  +  E  T  C+A+G P+P I W+ NG
Sbjct: 315 CTARNSLGFVE-HTISVTVKAAPYWITAPRNLVLSPGEDGTLICRANGNPKPNISWLING 373

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-T 222
            PI  AP +P RK+  + I   ++++S +  Y CNA+N  GY+  + +VNVLA  P I T
Sbjct: 374 VPIEMAPDDPSRKIDGDTILFSDVQESSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT 433

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           E       +  +  +L C  FG+P P + W    K   L    Y   + G L+I  VA  
Sbjct: 434 EVDLRYQVITDRPAMLDCAFFGSPIPTIEWFKGTKGSVLQENTYVFHDNGTLEIP-VAQK 492

Query: 281 DSGE-YTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           DS + YTC  RNKLG A+    L VK+ T I  QPE   V+ G   +F C    DP+L  
Sbjct: 493 DSADTYTCVVRNKLGMAKNDVHLEVKDPTRIIKQPEYKIVQRGGRVSFECTVKHDPTLIA 552

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV- 398
           ++ WL+     +  ++ RF   ND+ L +   S+ D   YTC A T LD + A A L V 
Sbjct: 553 TLTWLKDYG--ELPNDGRFSIDNDH-LVIMNISDEDDATYTCVANTSLDIVSASAMLRVV 609

Query: 399 -QVPLEAP 405
            + P  AP
Sbjct: 610 GKTPTPAP 617



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 155/639 (24%), Positives = 263/639 (41%), Gaps = 64/639 (10%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTCEV----SNGVGEAKSYSIDL----SVLAAPYF 128
           S+R+SQG  G       +    +  Y C      +  + + +  S+ +    S +  P  
Sbjct: 185 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVHSTKSYIERPPK 244

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWV-HNGK-PISQAPPNPRRKVGPNRI 182
            + PE   + +EE     ++ EC A GLP P I+W   +G+ PI++      +K     +
Sbjct: 245 LLTPEGRTSHKEELRENVLSLECIAEGLPTPSINWTKEDGELPINRTFYKNFKKT----L 300

Query: 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRV 242
            I ++ ++D+G Y C A NSLG+V   + V V A AP    AP++     G+   L CR 
Sbjct: 301 NIIHVSEADSGKYKCTARNSLGFVEHTISVTVKA-APYWITAPRNLVLSPGEDGTLICRA 359

Query: 243 FGAPKPEVNWIHN--QKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGS 299
            G PKP ++W+ N    E+     +    GD +  +DV  + S  Y C A N+ G    +
Sbjct: 360 NGNPKPNISWLINGVPIEMAPDDPSRKIDGDTILFSDVQESSSAVYQCNASNEYGYLLAN 419

Query: 300 GSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             + V       +T+    Y+V   + A   C     P    +I W +G++    + E  
Sbjct: 420 AFVNVLAEPPRILTEVDLRYQVITDRPAMLDCAFFGSPIP--TIEWFKGTKGSVLQ-ENT 476

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVI 414
           +V  ++ +L +  + +  +  YTC  + +L   +    L V+ P   ++ P  + ++Q  
Sbjct: 477 YVFHDNGTLEIPVAQKDSADTYTCVVRNKLGMAKNDVHLEVKDPTRIIKQPE-YKIVQ-- 533

Query: 415 DAKKAVVSWNPVSPQ--SLRGHFRGYKVQTWTEKDGEGSIRE---LIVNKGESTTTEVDK 469
             +   VS+        +L       K       DG  SI     +I+N  +        
Sbjct: 534 --RGGRVSFECTVKHDPTLIATLTWLKDYGELPNDGRFSIDNDHLVIMNISDEDDATYTC 591

Query: 470 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGV---PGTVQSLEAIPLGSSAFYLKWVK 526
               S +     A        P       TP  V   P     LE       +  L W+ 
Sbjct: 592 VANTSLDIVSASAMLRVVGKTP-------TPAPVYDRPNPPFDLELTSFLERSVQLSWIP 644

Query: 527 PEQPNGVLMGYKIKYQ-SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
            E+ N  +  + I+Y+ +     +      +P I     T+A+L  L P  KY   +   
Sbjct: 645 GEENNSPITEFIIEYEDAFHEPGIWHHQTDVPGIQ----TTAELK-LSPYVKYSFRVIAV 699

Query: 586 TKAGDGAESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI 639
              G    S+   Y       P +NP  VEG GS P+NLVI+W  +   + N P  +Y++
Sbjct: 700 NSIGRSLPSEASEYYMTKAAEPEENPTAVEGIGSEPDNLVITWQPLKGFDSNGPGLQYKV 759

Query: 640 FWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            WR+ +  + W    V+    S+ +++  PTF PY +KV
Sbjct: 760 SWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLVKV 796



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 99/200 (49%), Gaps = 12/200 (6%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ APSN   + V+++  A V W PV P+S+RGH +GY++  W  K+     R  +  K
Sbjct: 819  LPMVAPSNVR-VNVVNSTLAEVHWEPVPPKSIRGHLKGYRIYYWKVKNSSKRNRRHVEKK 877

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVPG    L+ + 
Sbjct: 878  ILTFNGNKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASVDQVFNTPEGVPGAPLFLKIVN 937

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +K+Q +  T ++GPL++ ++P       TS  L  L
Sbjct: 938  PTLDSLTLEWDPPSHPNGILTAYTLKFQPINSTHELGPLVDLKIPA----NMTSLILRNL 993

Query: 573  EPSTKYRIHLAGYTKAGDGA 592
              ST+Y+ +    T AG G+
Sbjct: 994  SYSTRYKFYFYAQTAAGTGS 1013



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 141/589 (23%), Positives = 219/589 (37%), Gaps = 75/589 (12%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P   W  +GVPI     +PS +I     G +++   V+ S    Y C  S
Sbjct: 355 LICRANGNPKPNISWLINGVPIEMAPDDPSRKID----GDTILFSDVQESSSAVYQCNAS 410

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAE-------EETVTFECKASGLPEPEIHWV 160
           N  G   + +  ++VLA P     P  +   +       +     +C   G P P I W 
Sbjct: 411 NEYGYLLANAF-VNVLAEP-----PRILTEVDLRYQVITDRPAMLDCAFFGSPIPTIEWF 464

Query: 161 HNGK-PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
              K  + Q         G   I +     +DT  Y C   N LG    DV++ V     
Sbjct: 465 KGTKGSVLQENTYVFHDNGTLEIPVAQKDSADT--YTCVVRNKLGMAKNDVHLEV-KDPT 521

Query: 220 EITEAPKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKEL-TGGRYTILETGDLKITD 276
            I + P+ +    G  V   C V   P     + W+ +  EL   GR++I +   L I +
Sbjct: 522 RIIKQPEYKIVQRGGRVSFECTVKHDPTLIATLTWLKDYGELPNDGRFSI-DNDHLVIMN 580

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
           ++  D   YTC A   L     S  L V     +   P    V    +  F     S   
Sbjct: 581 ISDEDDATYTCVANTSLDIVSASAMLRV-----VGKTPTPAPVYDRPNPPFDLELTSFLE 635

Query: 337 LKLSIVWLRGSE---PI--------DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
             + + W+ G E   PI        D   EP           +  ++EL    Y      
Sbjct: 636 RSVQLSWIPGEENNSPITEFIIEYEDAFHEPGIWHHQTDVPGIQTTAELKLSPYV----- 690

Query: 386 ELDF-IEAQATLTVQVPLEAPS-----------NFTLIQVIDAK--KAVVSWNPVSPQSL 431
           +  F + A  ++   +P EA             N T ++ I ++    V++W P+     
Sbjct: 691 KYSFRVIAVNSIGRSLPSEASEYYMTKAAEPEENPTAVEGIGSEPDNLVITWQPLKGFDS 750

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGP 490
            G    YKV +W +KDG+     ++V N  +   +    FVP      +V A N     P
Sbjct: 751 NGPGLQYKV-SWRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LVKVQALNNVGFAP 806

Query: 491 PSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT 547
              II   + E +P    S +    + S+   + W  V P+   G L GY+I Y  VK +
Sbjct: 807 EPGIIIGHSGEDLPMVAPSNVRVNVVNSTLAEVHWEPVPPKSIRGHLKGYRIYYWKVKNS 866

Query: 548 --KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
             +    +E+     +   T   L GLEP + Y +++      G+G  S
Sbjct: 867 SKRNRRHVEKKILTFNGNKTHGMLPGLEPFSHYTLNVRVVNGKGEGPAS 915



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 175/420 (41%), Gaps = 42/420 (10%)

Query: 30  RHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDG----VPINPSDRI--SQG 83
           R +PK  Y+   +E       +E+ C   G P P   W+++G    +  +P  ++  + G
Sbjct: 44  RQSPKD-YIIDPRE------NIEIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVKMLPNSG 96

Query: 84  NYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEE 141
               S+ I+    + +G Y C   N  G A S +I +    +P +T E   +      + 
Sbjct: 97  TLVISITIEGKAETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEQITILKGQS 156

Query: 142 TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTG-NYGCNA 199
            V       GLP P I W+ N     + P + R   G N  +   N+   DT  +Y C A
Sbjct: 157 LVLPCRPPLGLPPPIIFWMDNS--FQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYA 214

Query: 200 T-NSLGYVYKDVYVNVLAHAPE-ITEAPKDEYTVDGKT----------VVLTCRVFGAPK 247
             N    + +   ++V  H+ +   E P    T +G+T          + L C   G P 
Sbjct: 215 RFNHTQTIQQKQPISVKVHSTKSYIERPPKLLTPEGRTSHKEELRENVLSLECIAEGLPT 274

Query: 248 PEVNWIHNQKELTGGR--YTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           P +NW     EL   R  Y   +   L I  V+ ADSG+Y C ARN LG  + + S+TVK
Sbjct: 275 PSINWTKEDGELPINRTFYKNFKK-TLNIIHVSEADSGKYKCTARNSLGFVEHTISVTVK 333

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
              +    P +  +  G+  T  C A  +P  K +I WL    PI+   +    + +  +
Sbjct: 334 AAPYWITAPRNLVLSPGEDGTLICRANGNP--KPNISWLINGVPIEMAPDDPSRKIDGDT 391

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLI----QVIDAKKAVV 421
           +  +   E  S  Y C A  E  ++ A A   V V  E P   T +    QVI  + A++
Sbjct: 392 ILFSDVQESSSAVYQCNASNEYGYLLANA--FVNVLAEPPRILTEVDLRYQVITDRPAML 449



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 137/326 (42%), Gaps = 40/326 (12%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  MSALEVPLDLVQPPTITRQSPKDYIIDPRENIEIQCEAKGKPPPSFSWTRNGTHF-DIDK 85

Query: 172 NPRRKVGPN------RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +P  K+ PN       ITIE   ++  G Y C A N  G    +  V   + +P  T+  
Sbjct: 86  DPLVKMLPNSGTLVISITIEGKAETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEK 145

Query: 226 KDEYTV-DGKTVVLTCRVFGAPKPE-VNWIHN--QKELTGGRYTILETGDLKITDVAFAD 281
            ++ T+  G+++VL CR      P  + W+ N  Q+     R +    GDL  ++V   D
Sbjct: 146 LEQITILKGQSLVLPCRPPLGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPED 205

Query: 282 SGE-YTCFAR-NKLGTAQGSGSLTVKEHT--HITDQPEDYEVEAGQSA----------TF 327
           + E Y C+AR N   T Q    ++VK H+     ++P       G+++          + 
Sbjct: 206 TREDYICYARFNHTQTIQQKQPISVKVHSTKSYIERPPKLLTPEGRTSHKEELRENVLSL 265

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P+  ++     G  PI+      F ++   +L +   SE DSG+Y C A+  L
Sbjct: 266 ECIAEGLPTPSINWTKEDGELPINR----TFYKNFKKTLNIIHVSEADSGKYKCTARNSL 321

Query: 388 DFIEAQATLTVQVP---LEAPSNFTL 410
            F+E   ++TV+     + AP N  L
Sbjct: 322 GFVEHTISVTVKAAPYWITAPRNLVL 347


>gi|334348527|ref|XP_003342071.1| PREDICTED: neuronal cell adhesion molecule [Monodelphis domestica]
          Length = 1174

 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/368 (36%), Positives = 190/368 (51%), Gaps = 16/368 (4%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           LR   + L CI  G P P   W+K DG +PIN   R    N+ K+L I HV  +D G Y 
Sbjct: 258 LRENVLSLECIAEGLPTPSINWTKEDGELPIN---RTFYKNFKKTLNIIHVSEADSGKYK 314

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G  + ++I ++V AAPY+   P  +  +  E  T  C+A+G P+P I W+ NG
Sbjct: 315 CTARNSLGFVE-HTISVTVKAAPYWITAPRNLVLSPGEDGTLICRANGNPKPNISWLING 373

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-T 222
            PI  AP +P RK+  + I   ++++S +  Y CNA+N  GY+  + +VNVLA  P I T
Sbjct: 374 VPIEMAPDDPSRKIDGDTILFSDVQESSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT 433

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           E       +  +  +L C  FG+P P + W    K   L    Y   + G L+I  VA  
Sbjct: 434 EVDLRYQVITDRPAMLDCAFFGSPIPTIEWFKGTKGSVLQENTYVFHDNGTLEIP-VAQK 492

Query: 281 DSGE-YTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           DS + YTC  RNKLG A+    L VK+ T I  QPE   V+ G   +F C    DP+L  
Sbjct: 493 DSADTYTCVVRNKLGMAKNDVHLEVKDPTRIIKQPEYKIVQRGGRVSFECTVKHDPTLIA 552

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV- 398
           ++ WL+     +  ++ RF   ND+ L +   S+ D   YTC A T LD + A A L V 
Sbjct: 553 TLTWLKDYG--ELPNDGRFSIDNDH-LVIMNISDEDDATYTCVANTSLDIVSASAMLRVV 609

Query: 399 -QVPLEAP 405
            + P  AP
Sbjct: 610 GKTPTPAP 617



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 155/639 (24%), Positives = 263/639 (41%), Gaps = 64/639 (10%)

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTCEV----SNGVGEAKSYSIDL----SVLAAPYF 128
           S+R+SQG  G       +    +  Y C      +  + + +  S+ +    S +  P  
Sbjct: 185 SERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVHSTKSYIERPPK 244

Query: 129 TVEPEFINAAEEE----TVTFECKASGLPEPEIHWV-HNGK-PISQAPPNPRRKVGPNRI 182
            + PE   + +EE     ++ EC A GLP P I+W   +G+ PI++      +K     +
Sbjct: 245 LLTPEGRTSHKEELRENVLSLECIAEGLPTPSINWTKEDGELPINRTFYKNFKKT----L 300

Query: 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRV 242
            I ++ ++D+G Y C A NSLG+V   + V V A AP    AP++     G+   L CR 
Sbjct: 301 NIIHVSEADSGKYKCTARNSLGFVEHTISVTVKA-APYWITAPRNLVLSPGEDGTLICRA 359

Query: 243 FGAPKPEVNWIHN--QKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGS 299
            G PKP ++W+ N    E+     +    GD +  +DV  + S  Y C A N+ G    +
Sbjct: 360 NGNPKPNISWLINGVPIEMAPDDPSRKIDGDTILFSDVQESSSAVYQCNASNEYGYLLAN 419

Query: 300 GSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             + V       +T+    Y+V   + A   C     P    +I W +G++    + E  
Sbjct: 420 AFVNVLAEPPRILTEVDLRYQVITDRPAMLDCAFFGSPIP--TIEWFKGTKGSVLQ-ENT 476

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVI 414
           +V  ++ +L +  + +  +  YTC  + +L   +    L V+ P   ++ P  + ++Q  
Sbjct: 477 YVFHDNGTLEIPVAQKDSADTYTCVVRNKLGMAKNDVHLEVKDPTRIIKQPE-YKIVQ-- 533

Query: 415 DAKKAVVSWNPVSPQ--SLRGHFRGYKVQTWTEKDGEGSIRE---LIVNKGESTTTEVDK 469
             +   VS+        +L       K       DG  SI     +I+N  +        
Sbjct: 534 --RGGRVSFECTVKHDPTLIATLTWLKDYGELPNDGRFSIDNDHLVIMNISDEDDATYTC 591

Query: 470 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGV---PGTVQSLEAIPLGSSAFYLKWVK 526
               S +     A        P       TP  V   P     LE       +  L W+ 
Sbjct: 592 VANTSLDIVSASAMLRVVGKTP-------TPAPVYDRPNPPFDLELTSFLERSVQLSWIP 644

Query: 527 PEQPNGVLMGYKIKYQ-SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
            E+ N  +  + I+Y+ +     +      +P I     T+A+L  L P  KY   +   
Sbjct: 645 GEENNSPITEFIIEYEDAFHEPGIWHHQTDVPGIQ----TTAELK-LSPYVKYSFRVIAV 699

Query: 586 TKAGDGAESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI 639
              G    S+   Y       P +NP  VEG GS P+NLVI+W  +   + N P  +Y++
Sbjct: 700 NSIGRSLPSEASEYYMTKAAEPEENPTAVEGIGSEPDNLVITWQPLKGFDSNGPGLQYKV 759

Query: 640 FWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            WR+ +  + W    V+    S+ +++  PTF PY +KV
Sbjct: 760 SWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYLVKV 796



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 99/200 (49%), Gaps = 12/200 (6%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ APSN   + V+++  A V W PV P+S+RGH +GY++  W  K+     R  +  K
Sbjct: 819  LPMVAPSNVR-VNVVNSTLAEVHWEPVPPKSIRGHLKGYRIYYWKVKNSSKRNRRHVEKK 877

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVPG    L+ + 
Sbjct: 878  ILTFNGNKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASVDQVFNTPEGVPGAPLFLKIVN 937

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +K+Q +  T ++GPL++ ++P       TS  L  L
Sbjct: 938  PTLDSLTLEWDPPSHPNGILTAYTLKFQPINSTHELGPLVDLKIP----ANMTSLILRNL 993

Query: 573  EPSTKYRIHLAGYTKAGDGA 592
              ST+Y+ +    T AG G+
Sbjct: 994  SYSTRYKFYFYAQTAAGTGS 1013



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 141/589 (23%), Positives = 219/589 (37%), Gaps = 75/589 (12%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P   W  +GVPI     +PS +I     G +++   V+ S    Y C  S
Sbjct: 355 LICRANGNPKPNISWLINGVPIEMAPDDPSRKID----GDTILFSDVQESSSAVYQCNAS 410

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAE-------EETVTFECKASGLPEPEIHWV 160
           N  G   + +  ++VLA P     P  +   +       +     +C   G P P I W 
Sbjct: 411 NEYGYLLANAF-VNVLAEP-----PRILTEVDLRYQVITDRPAMLDCAFFGSPIPTIEWF 464

Query: 161 HNGK-PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
              K  + Q         G   I +     +DT  Y C   N LG    DV++ V     
Sbjct: 465 KGTKGSVLQENTYVFHDNGTLEIPVAQKDSADT--YTCVVRNKLGMAKNDVHLEV-KDPT 521

Query: 220 EITEAPKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKEL-TGGRYTILETGDLKITD 276
            I + P+ +    G  V   C V   P     + W+ +  EL   GR++I +   L I +
Sbjct: 522 RIIKQPEYKIVQRGGRVSFECTVKHDPTLIATLTWLKDYGELPNDGRFSI-DNDHLVIMN 580

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
           ++  D   YTC A   L     S  L V     +   P    V    +  F     S   
Sbjct: 581 ISDEDDATYTCVANTSLDIVSASAMLRV-----VGKTPTPAPVYDRPNPPFDLELTSFLE 635

Query: 337 LKLSIVWLRGSE---PI--------DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
             + + W+ G E   PI        D   EP           +  ++EL    Y      
Sbjct: 636 RSVQLSWIPGEENNSPITEFIIEYEDAFHEPGIWHHQTDVPGIQTTAELKLSPYV----- 690

Query: 386 ELDF-IEAQATLTVQVPLEAPS-----------NFTLIQVIDAK--KAVVSWNPVSPQSL 431
           +  F + A  ++   +P EA             N T ++ I ++    V++W P+     
Sbjct: 691 KYSFRVIAVNSIGRSLPSEASEYYMTKAAEPEENPTAVEGIGSEPDNLVITWQPLKGFDS 750

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGP 490
            G    YKV +W +KDG+     ++V N  +   +    FVP      +V A N     P
Sbjct: 751 NGPGLQYKV-SWRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LVKVQALNNVGFAP 806

Query: 491 PSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT 547
              II   + E +P    S +    + S+   + W  V P+   G L GY+I Y  VK +
Sbjct: 807 EPGIIIGHSGEDLPMVAPSNVRVNVVNSTLAEVHWEPVPPKSIRGHLKGYRIYYWKVKNS 866

Query: 548 --KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
             +    +E+     +   T   L GLEP + Y +++      G+G  S
Sbjct: 867 SKRNRRHVEKKILTFNGNKTHGMLPGLEPFSHYTLNVRVVNGKGEGPAS 915



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 175/420 (41%), Gaps = 42/420 (10%)

Query: 30  RHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDG----VPINPSDRI--SQG 83
           R +PK  Y+   +E       +E+ C   G P P   W+++G    +  +P  ++  + G
Sbjct: 44  RQSPKD-YIIDPRE------NIEIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVKMLPNSG 96

Query: 84  NYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEE 141
               S+ I+    + +G Y C   N  G A S +I +    +P +T E   +      + 
Sbjct: 97  TLVISITIEGKAETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEQITILKGQS 156

Query: 142 TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTG-NYGCNA 199
            V       GLP P I W+ N     + P + R   G N  +   N+   DT  +Y C A
Sbjct: 157 LVLPCRPPLGLPPPIIFWMDNS--FQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYA 214

Query: 200 T-NSLGYVYKDVYVNVLAHAPE-ITEAPKDEYTVDGKT----------VVLTCRVFGAPK 247
             N    + +   ++V  H+ +   E P    T +G+T          + L C   G P 
Sbjct: 215 RFNHTQTIQQKQPISVKVHSTKSYIERPPKLLTPEGRTSHKEELRENVLSLECIAEGLPT 274

Query: 248 PEVNWIHNQKELTGGR--YTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           P +NW     EL   R  Y   +   L I  V+ ADSG+Y C ARN LG  + + S+TVK
Sbjct: 275 PSINWTKEDGELPINRTFYKNFKK-TLNIIHVSEADSGKYKCTARNSLGFVEHTISVTVK 333

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
              +    P +  +  G+  T  C A  +P  K +I WL    PI+   +    + +  +
Sbjct: 334 AAPYWITAPRNLVLSPGEDGTLICRANGNP--KPNISWLINGVPIEMAPDDPSRKIDGDT 391

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLI----QVIDAKKAVV 421
           +  +   E  S  Y C A  E  ++ A A   V V  E P   T +    QVI  + A++
Sbjct: 392 ILFSDVQESSSAVYQCNASNEYGYLLANA--FVNVLAEPPRILTEVDLRYQVITDRPAML 449



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 137/326 (42%), Gaps = 40/326 (12%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  MSALEVPLDLVQPPTITRQSPKDYIIDPRENIEIQCEAKGKPPPSFSWTRNGTHF-DIDK 85

Query: 172 NPRRKVGPN------RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +P  K+ PN       ITIE   ++  G Y C A N  G    +  V   + +P  T+  
Sbjct: 86  DPLVKMLPNSGTLVISITIEGKAETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEK 145

Query: 226 KDEYTV-DGKTVVLTCRVFGAPKPE-VNWIHN--QKELTGGRYTILETGDLKITDVAFAD 281
            ++ T+  G+++VL CR      P  + W+ N  Q+     R +    GDL  ++V   D
Sbjct: 146 LEQITILKGQSLVLPCRPPLGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPED 205

Query: 282 SGE-YTCFAR-NKLGTAQGSGSLTVKEHT--HITDQPEDYEVEAGQSA----------TF 327
           + E Y C+AR N   T Q    ++VK H+     ++P       G+++          + 
Sbjct: 206 TREDYICYARFNHTQTIQQKQPISVKVHSTKSYIERPPKLLTPEGRTSHKEELRENVLSL 265

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P+  ++     G  PI+      F ++   +L +   SE DSG+Y C A+  L
Sbjct: 266 ECIAEGLPTPSINWTKEDGELPINR----TFYKNFKKTLNIIHVSEADSGKYKCTARNSL 321

Query: 388 DFIEAQATLTVQVP---LEAPSNFTL 410
            F+E   ++TV+     + AP N  L
Sbjct: 322 GFVEHTISVTVKAAPYWITAPRNLVL 347


>gi|301762171|ref|XP_002916515.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-1-like [Ailuropoda
           melanoleuca]
          Length = 2143

 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 184/625 (29%), Positives = 274/625 (43%), Gaps = 44/625 (7%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
           + V   + ++ L CI    P+ +    W ++GV      +++ G  ++G+ L I     +
Sbjct: 237 RSVVAGSNEITLECIANARPVEELHVNWKRNGV------KVTSGLHSFGRRLTIGSPTSA 290

Query: 98  DQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAE-EETVTFECKASGLPE 154
           D G Y CE +       A +    LS++  PYFT EPE    AE E+TV   C+A G+P 
Sbjct: 291 DTGLYVCEATLRGSAFNAATAEAFLSIIEPPYFTAEPESRMLAEVEDTVDIACQAMGVPL 350

Query: 155 PEIHWVHNGKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P + W  +   I     NPR K+     + I+ LR  D+G + C A+N  G +    Y++
Sbjct: 351 PTLQWYKDAVSIGTLQ-NPRYKLLSSGGLRIQGLRPEDSGIFQCFASNEGGEIQTYTYLD 409

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V   AP  T+ P D    DG T VL C V GAPKP + W   +  L  G     R+ +LE
Sbjct: 410 VTNVAPAFTQLPVDTTVTDGMTAVLRCEVSGAPKPAITWRRGKHILASGSVRIPRFMLLE 469

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L+I  V   D+G YTC+A N  G+   S +LTV   T I + PED  V  G +A   
Sbjct: 470 SGGLQIAPVFIQDAGNYTCYAANTEGSLNASAALTVWNRTSIVNPPEDRVVIKGTTAMLH 529

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A  DP + L  VW + +  I   S  R V   D SL ++++   D G YTC   +E  
Sbjct: 530 CGATHDPRITLRYVWKKDNTVITPSSSSRIVVEKDGSLLISQTWSGDIGDYTCEIISEGG 589

Query: 389 FIEAQATLTVQVPLEAPSNFTL-IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
                A L V     +P N    +    +   V+SW  V P         Y V+  +E +
Sbjct: 590 NDSRTARLEVIELPHSPQNLLASLNSSHSHTVVLSW--VRPFDGNSPVLYYIVEV-SENN 646

Query: 448 GEGSIRELIVNKG-ESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEG 502
               +   + N G E T   V    PA     RV A N    G Y+   S ++    P  
Sbjct: 647 SPWKVH--LSNVGPEMTGVAVRGLTPARTYQFRVCAVNQVGKGQYSAETSRLMLPEEPPS 704

Query: 503 VPGTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560
            P   +++ A    + +  ++W  P +   NGVL GY ++Y+ + G    P   +   I+
Sbjct: 705 APP--KNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYR-LAGL---PGEHQQRNIT 758

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEGRGSTP 615
            P      +  L   T+Y I +A Y  AG G  S+      L  VP   P NV+      
Sbjct: 759 SPEVNYCLVTELIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNS 818

Query: 616 NNLVISWTAMPEIEHNAPHFKYRIF 640
             +   W   P+   N  +  Y++ 
Sbjct: 819 TTIQFFWNPPPQQFINGINQGYKLL 843



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 161/383 (42%), Gaps = 34/383 (8%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           ++K V+  +  V         P PQ  W ++G  I PS+RI+       L+I      D 
Sbjct: 133 QRKTVSQGHAAVLNLLPIPSCPRPQVTWFREGHKIIPSNRIAI-TLENQLVILATTVGDS 191

Query: 100 GSYTCEVSNGV-GEAK-SYSIDLSV--------LAAPYFTVEP--EFINAAEEETVTFEC 147
           G+Y  +  N   GE K S  I LS+          AP   + P    + A   E +T EC
Sbjct: 192 GAYYAQAVNERNGENKTSPLIHLSIARDVGTPETMAPVIVIPPGNRSVVAGSNE-ITLEC 250

Query: 148 KASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT---NS 202
            A+  P  E+H  W  NG  ++    +  R     R+TI +   +DTG Y C AT   ++
Sbjct: 251 IANARPVEELHVNWKRNGVKVTSGLHSFGR-----RLTIGSPTSADTGLYVCEATLRGSA 305

Query: 203 LGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKE--- 258
                 + +++++   P  T  P+     + + TV + C+  G P P + W  +      
Sbjct: 306 FNAATAEAFLSII-EPPYFTAEPESRMLAEVEDTVDIACQAMGVPLPTLQWYKDAVSIGT 364

Query: 259 LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPEDY 317
           L   RY +L +G L+I  +   DSG + CFA N+ G  Q    L V       T  P D 
Sbjct: 365 LQNPRYKLLSSGGLRIQGLRPEDSGIFQCFASNEGGEIQTYTYLDVTNVAPAFTQLPVDT 424

Query: 318 EVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELD 375
            V  G +A  RC     P  K +I W RG   +   S   PRF+      L +      D
Sbjct: 425 TVTDGMTAVLRCEVSGAP--KPAITWRRGKHILASGSVRIPRFMLLESGGLQIAPVFIQD 482

Query: 376 SGQYTCRAQTELDFIEAQATLTV 398
           +G YTC A      + A A LTV
Sbjct: 483 AGNYTCYAANTEGSLNASAALTV 505



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 6/144 (4%)

Query: 401  PLEAPSNFTLIQV--IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVN 458
            P  AP N   IQV  + A +  V+W+P  P+S  G+ +GYKV  W E   +    ++ V 
Sbjct: 1636 PAMAPQN---IQVTPLTASQLEVTWDPPPPESQNGNIQGYKVYYW-EAGSQNETEKMKVL 1691

Query: 459  KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSS 518
                T  ++      ++    + AFN A +GP S      T +  PGT   L    + S+
Sbjct: 1692 FLPETVVKLKNLTSHTQYLVSISAFNAAGDGPQSAPRQGRTHQAAPGTPSFLAFSEITST 1751

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQ 542
               + W +P   NGVL GY++ Y+
Sbjct: 1752 TLNVSWGEPAAANGVLQGYRVVYE 1775



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 143/606 (23%), Positives = 218/606 (35%), Gaps = 62/606 (10%)

Query: 53   LFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKS--LIIKHVEFSDQGSYTCEVSNG 109
            L C   G P P   W +   +  + S RI +    +S  L I  V   D G+YTC  +N 
Sbjct: 434  LRCEVSGAPKPAITWRRGKHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANT 493

Query: 110  VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
             G   + S  L+V         PE     +  T    C A+  P   + +V         
Sbjct: 494  EGSLNA-SAALTVWNRTSIVNPPEDRVVIKGTTAMLHCGATHDPRITLRYVWKKDNTVIT 552

Query: 170  PPNPRRKV--GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAPEITEAP 225
            P +  R V      + I      D G+Y C   +  G   +   + V  L H+P+   A 
Sbjct: 553  PSSSSRIVVEKDGSLLISQTWSGDIGDYTCEIISEGGNDSRTARLEVIELPHSPQNLLAS 612

Query: 226  KDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAF----- 279
             +  +    TVVL+  R F    P + +I    E        L     ++T VA      
Sbjct: 613  LN--SSHSHTVVLSWVRPFDGNSPVLYYIVEVSENNSPWKVHLSNVGPEMTGVAVRGLTP 670

Query: 280  ADSGEYTCFARNKLGTAQGSGS---LTVKEHTHITDQPEDYEVEAGQS------------ 324
            A + ++   A N++G  Q S     L + E       P    V +G++            
Sbjct: 671  ARTYQFRVCAVNQVGKGQYSAETSRLMLPEEP--PSAPPKNIVASGRTNQSIMVQWQPPP 728

Query: 325  ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             T     +    L+  +  L G       + P         L +    E+    Y     
Sbjct: 729  ETEHNGVLRGYILRYRLAGLPGEHQQRNITSPEVNYCLVTELIIWTQYEIQVAAYNGAGL 788

Query: 385  TELDFIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW 443
                F  A    T+Q VP   P N    + +++      WNP   Q + G  +GYK+  W
Sbjct: 789  GV--FSRAVTEYTLQGVPTAPPQNVQ-TEAVNSTTIQFFWNPPPQQFINGINQGYKLLAW 845

Query: 444  TEKDGEGSIRELI------VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
              +  E +    I      V+ G    T + KF     +   VL F    +GPPS     
Sbjct: 846  PAEVPEATAVVTIAPDFHGVHHG--YITNLKKFTAYRTS---VLCFTTPGDGPPSTPQLV 900

Query: 498  VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLP 557
             T E  PG V  L    +  ++  + W +P + NG++ GY++ ++ V G        RL 
Sbjct: 901  WTHEDKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQVSWE-VYGRNG----SRLT 955

Query: 558  YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY--VPFKNPDNVEGRGSTP 615
            +    TT   K+ GL   T Y I +A     G G  +       VP + P         P
Sbjct: 956  HTLSNTTQEYKIKGLLSLTTYTIDVAAVXSPGAGLATSSTISSGVPPELP-------GAP 1008

Query: 616  NNLVIS 621
            +NLVIS
Sbjct: 1009 SNLVIS 1014



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 68/295 (23%), Positives = 107/295 (36%), Gaps = 32/295 (10%)

Query: 126 PYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
           PYF  EP       E   +   C A G    E  W+HN + ++             +  I
Sbjct: 39  PYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMHNDRELTT-------YTSEYKYII 91

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR-VF 243
            +L++ D G Y C   N +G + +      +A+     +A + +    G   VL    + 
Sbjct: 92  PSLQRLDAGFYRCVVRNRMGALLQRRSEVQVAYMGNFMDADQRKTVSQGHAAVLNLLPIP 151

Query: 244 GAPKPEVNWIH-NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNK---------- 292
             P+P+V W     K +   R  I     L I      DSG Y   A N+          
Sbjct: 152 SCPRPQVTWFREGHKIIPSNRIAITLENQLVILATTVGDSGAYYAQAVNERNGENKTSPL 211

Query: 293 --LGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEP 349
             L  A+  G+        I   P +  V AG +  T  C A + P  +L + W R    
Sbjct: 212 IHLSIARDVGTPETMAPV-IVIPPGNRSVVAGSNEITLECIANARPVEELHVNWKRNGVK 270

Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ---TELDFIEAQATLTVQVP 401
           +        + S    LT+   +  D+G Y C A    +  +   A+A L++  P
Sbjct: 271 VT-----SGLHSFGRRLTIGSPTSADTGLYVCEATLRGSAFNAATAEAFLSIIEP 320



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 12/208 (5%)

Query: 397  TVQVPLE-APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIR 453
            T+Q P + AP++ T ++        + W P+      G+    GY++  W   D +  + 
Sbjct: 1103 TLQAPPDVAPTSIT-VRTASETSLRLRWVPLPDSQYNGNPESVGYRIGYW-RPDLQAPVL 1160

Query: 454  ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEA 512
              ++N        ++     ++   ++ AFN    GP SE +   T E VP    +++ A
Sbjct: 1161 AQVINDRLEREFTIEGLEEWTEYELQMQAFNAIGAGPWSETVRGRTRESVPSAAPENVSA 1220

Query: 513  IPLGSSAFYLKW-VKPEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
              + S+   L W + PEQ  NG+++GYKI +++ K     P   R   +    T SA LA
Sbjct: 1221 EAVSSTQILLTWALVPEQDQNGLILGYKILFRA-KDLDPEP---RSHVVRGNHTQSALLA 1276

Query: 571  GLEPSTKYRIHLAGYTKAGDGAESKYLF 598
            GL     Y + +  +T+ G+G  S  L 
Sbjct: 1277 GLRKFVLYELQVLAFTRIGNGVPSSPLI 1304



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 21/200 (10%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V  Q   G   GYK+  +  KD +   R  +V  
Sbjct: 1210 VPSAAPENVS-AEAVSSTQILLTWALVPEQDQNGLILGYKI-LFRAKDLDPEPRSHVVRG 1267

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNG-PPSEIISFVTPEGVPGTVQSLEAIPLGSS 518
              + +  +           +VLAF    NG P S +I   T +  PG    L    +  +
Sbjct: 1268 NHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSSPLILERTKDDAPGPPVRLVFPEVRLT 1327

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGT-------KVGPLLERLPYISDPTTTSAKLAG 571
            +  + W  PE+PNG+++GY+I Y+    +       +VG  + +         T+ +LA 
Sbjct: 1328 SVRIVWQPPEEPNGIILGYQIAYRLASSSPNTFTTVEVGATVRQF--------TATELA- 1378

Query: 572  LEPSTKYRIHLAGYTKAGDG 591
              P + Y   L+  T+ G G
Sbjct: 1379 --PESAYIFRLSAKTRQGWG 1396



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 90/229 (39%), Gaps = 30/229 (13%)

Query: 391  EAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV--------- 440
            E  A  T+Q VP E PS F  +        ++ W P   +SL G  +GY++         
Sbjct: 1502 ETDAVTTLQDVPGEPPS-FVSVTPHTTSSVLIQWRPPRDESLNGLLQGYRIYYRELESEA 1560

Query: 441  ----QTWTEKDGEGSIREL-------IVNKGESTTTEVDKFVPASKNFARVL-AFNGAYN 488
                 + T K       EL        VN   + TT     +   + +  +L A+N    
Sbjct: 1561 SSASVSKTLKTPSALRAELAAQSSFKTVNSSSTLTTYELTRLKKYRRYELILTAYNIIGE 1620

Query: 489  GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
             P S  +     E  P    Q+++  PL +S   + W    PE  NG + GYK+ Y    
Sbjct: 1621 SPASAPVEVFVGEAAPAMAPQNIQVTPLTASQLEVTWDPPPPESQNGNIQGYKVYYWEAG 1680

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
                    E++  +  P T   KL  L   T+Y + ++ +  AGDG +S
Sbjct: 1681 SQNE---TEKMKVLFLPETV-VKLKNLTSHTQYLVSISAFNAAGDGPQS 1725



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 13/171 (7%)

Query: 518  SAFYLKWVK--PEQPNG--VLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLE 573
            ++  L+WV     Q NG    +GY+I Y   +     P+L ++  I+D       + GLE
Sbjct: 1123 TSLRLRWVPLPDSQYNGNPESVGYRIGYW--RPDLQAPVLAQV--INDRLEREFTIEGLE 1178

Query: 574  PSTKYRIHLAGYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEI 628
              T+Y + +  +   G G  S+ +       VP   P+NV     +   ++++W  +PE 
Sbjct: 1179 EWTEYELQMQAFNAIGAGPWSETVRGRTRESVPSAAPENVSAEAVSSTQILLTWALVPEQ 1238

Query: 629  EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVV 679
            + N     Y+I +R  +         V        +LA    F  YE++V+
Sbjct: 1239 DQNGLILGYKILFRAKDLDPEPRSHVVRGNHTQSALLAGLRKFVLYELQVL 1289


>gi|38372401|sp|P97686.2|NRCAM_RAT RecName: Full=Neuronal cell adhesion molecule; Short=Nr-CAM;
           AltName: Full=Ankyrin-binding cell adhesion molecule
           NrCAM; AltName: Full=Neuronal surface protein Bravo;
           Short=rBravo; AltName: Full=NgCAM-related cell adhesion
           molecule; Short=Ng-CAM-related; Flags: Precursor
          Length = 1214

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 162/524 (30%), Positives = 239/524 (45%), Gaps = 38/524 (7%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           LR   + L CI  G P P   W K DG +P+N   R    N+ K+L I HV  +D G+Y 
Sbjct: 283 LRGNVLSLECIAEGLPTPVIYWIKEDGTLPVN---RTFYRNFKKTLQIIHVSEADSGNYQ 339

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A  ++I ++V AAPY+ V P  +  +  E  T  C+A+G P+P I W+ NG
Sbjct: 340 CIAKNALG-AVHHTISVTVKAAPYWIVAPHNLVLSPGENGTLICRANGNPKPRISWLTNG 398

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+  A  +P RK+  + I   N+++S +  Y CNA+N  GY+  + +VNVLA  P I  
Sbjct: 399 VPVEIALDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILT 458

Query: 224 APKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFA 280
           +    Y V   +  +L C  FG+P P + W    K   L    Y + + G L+I      
Sbjct: 459 SANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALHEDIYVLHDNGTLEIPVAQKD 518

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            +G YTC ARNKLG A+    L +K+ T    QP    V+ G   +F C    D +L  +
Sbjct: 519 STGTYTCVARNKLGMAKNEVHLEIKDPTRFIKQPGYAVVQRGSKVSFECKVKHDHTLIPT 578

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I+WL+ +   +  ++ RF    D+ L V+   + D G YTC A T LD + A A L V  
Sbjct: 579 ILWLKDNG--ELPNDERFSVDKDH-LVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVA 635

Query: 401 PLEAPS----------NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG 450
           P   P+          +  L   +D K   ++W P    +       + ++        G
Sbjct: 636 PTPTPAPIYDVPNPPFDLELTNQLD-KSVQLTWTPGDDNN--SPITKFIIEYEDAMHEAG 692

Query: 451 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPG 505
             R      G  TT ++ K  P      RV+A N      PSE     +     P+  P 
Sbjct: 693 LWRHQAEVSGTQTTAQL-KLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPT 751

Query: 506 TVQSLEAIPLGSSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
            V+ L   P       + W KP    Q NG  + YK+ ++   G
Sbjct: 752 AVEGLGTEP---DNLVITW-KPLNGFQSNGPGLQYKVSWRQKDG 791



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 136/560 (24%), Positives = 236/560 (42%), Gaps = 50/560 (8%)

Query: 143 VTFECKASGLPEPEIHWVHNGK--PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
           ++ EC A GLP P I+W+      P+++      +K     + I ++ ++D+GNY C A 
Sbjct: 288 LSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKKT----LQIIHVSEADSGNYQCIAK 343

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QKE 258
           N+LG V+  + V V A AP    AP +     G+   L CR  G PKP ++W+ N    E
Sbjct: 344 NALGAVHHTISVTVKA-APYWIVAPHNLVLSPGENGTLICRANGNPKPRISWLTNGVPVE 402

Query: 259 LTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPE 315
           +     +    GD +  ++V  + S  Y C A NK G    +  + V       +T    
Sbjct: 403 IALDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILTSANT 462

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
            Y+V A + A   C     P    +I W +G++      E  +V  ++ +L +  + +  
Sbjct: 463 LYQVIANRPALLDCAFFGSP--MPTIEWFKGTKGSALH-EDIYVLHDNGTLEIPVAQKDS 519

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q    + + VS+       ++
Sbjct: 520 TGTYTCVARNKLGMAKNEVHLEIKDPTRFIKQPG-YAVVQ----RGSKVSFE----CKVK 570

Query: 433 GHFRGYKVQTWTEKDGEGSIRE-LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                     W + +GE    E   V+K     ++V      +   A     +       
Sbjct: 571 HDHTLIPTILWLKDNGELPNDERFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVSA--- 627

Query: 492 SEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
           S ++  V P   P  +  +   P           +  L W   +  N  +  + I+Y+  
Sbjct: 628 SAVLRVVAPTPTPAPIYDVPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYED- 686

Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV 600
                  L      +S  T T+A+L  L P   Y   +      G      A  +YL   
Sbjct: 687 -AMHEAGLWRHQAEVSG-TQTTAQLK-LSPYVNYSFRVMAENSIGRSVPSEASEQYLTKA 743

Query: 601 --PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDW 658
             P +NP  VEG G+ P+NLVI+W  +   + N P  +Y++ WR+ +  + W    V+  
Sbjct: 744 AEPDQNPTAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTS--VVVA 801

Query: 659 RQSELVLANQPTFQPYEIKV 678
             S+ +++  PTF PY IKV
Sbjct: 802 NVSKYIVSGTPTFVPYLIKV 821



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 96/201 (47%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A   W+PV P+S+RGH +GY++  W  +      R  I  K
Sbjct: 844  LPMVAPGNVR-VSVVNSTLAEAHWDPVPPKSVRGHLQGYRIYYWKAQSSSKRNRRHIEKK 902

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 903  ILTFQGSKTHGMLPGLQPYSHYVLNVRVVNGKGEGPASADRGFHTPEGVPSAPSSLKIVN 962

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 963  PTLDSLTLEWDPPSHPNGILTEYILKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 1018

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T  G G++
Sbjct: 1019 NFSTRYKFYFYAQTSVGSGSQ 1039



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 77/317 (24%), Positives = 121/317 (38%), Gaps = 53/317 (16%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   + I  +   K++T  G Y
Sbjct: 62  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGSGTLVINIMSEGKAETYEGVY 121

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +  V   + +P  T+   +   +  G+++VL CR   G P   + W+
Sbjct: 122 QCTARNERGAAVSNNIVVRPSRSPLWTKERLEPIILRSGQSLVLPCRPPIGLPPAIIFWM 181

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-------------------- 290
            N  Q+     R +    GDL  ++V   D+ E Y C+AR                    
Sbjct: 182 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISLKVISV 241

Query: 291 --------NKLGTAQGSGSLTVKEHTHITDQPEDYEVEA----GQSATFRCNAVSDPSLK 338
                     L   +  G+ + KE       PE  E       G   +  C A   P+  
Sbjct: 242 DELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNESHKEELRGNVLSLECIAEGLPT-- 299

Query: 339 LSIVWLR--GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             I W++  G+ P++      F ++   +L +   SE DSG Y C A+  L  +    ++
Sbjct: 300 PVIYWIKEDGTLPVNR----TFYRNFKKTLQIIHVSEADSGNYQCIAKNALGAVHHTISV 355

Query: 397 TVQVP---LEAPSNFTL 410
           TV+     + AP N  L
Sbjct: 356 TVKAAPYWIVAPHNLVL 372


>gi|334348524|ref|XP_003342070.1| PREDICTED: neuronal cell adhesion molecule [Monodelphis domestica]
          Length = 1205

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/368 (36%), Positives = 190/368 (51%), Gaps = 16/368 (4%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           LR   + L CI  G P P   W+K DG +PIN   R    N+ K+L I HV  +D G Y 
Sbjct: 277 LRENVLSLECIAEGLPTPSINWTKEDGELPIN---RTFYKNFKKTLNIIHVSEADSGKYK 333

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G  + ++I ++V AAPY+   P  +  +  E  T  C+A+G P+P I W+ NG
Sbjct: 334 CTARNSLGFVE-HTISVTVKAAPYWITAPRNLVLSPGEDGTLICRANGNPKPNISWLING 392

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-T 222
            PI  AP +P RK+  + I   ++++S +  Y CNA+N  GY+  + +VNVLA  P I T
Sbjct: 393 VPIEMAPDDPSRKIDGDTILFSDVQESSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT 452

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           E       +  +  +L C  FG+P P + W    K   L    Y   + G L+I  VA  
Sbjct: 453 EVDLRYQVITDRPAMLDCAFFGSPIPTIEWFKGTKGSVLQENTYVFHDNGTLEIP-VAQK 511

Query: 281 DSGE-YTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           DS + YTC  RNKLG A+    L VK+ T I  QPE   V+ G   +F C    DP+L  
Sbjct: 512 DSADTYTCVVRNKLGMAKNDVHLEVKDPTRIIKQPEYKIVQRGGRVSFECTVKHDPTLIA 571

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV- 398
           ++ WL+     +  ++ RF   ND+ L +   S+ D   YTC A T LD + A A L V 
Sbjct: 572 TLTWLKDYG--ELPNDGRFSIDNDH-LVIMNISDEDDATYTCVANTSLDIVSASAMLRVV 628

Query: 399 -QVPLEAP 405
            + P  AP
Sbjct: 629 GKTPTPAP 636



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 141/564 (25%), Positives = 235/564 (41%), Gaps = 52/564 (9%)

Query: 140 EETVTFECKASGLPEPEIHWV-HNGK-PISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           E  ++ EC A GLP P I+W   +G+ PI++      +K     + I ++ ++D+G Y C
Sbjct: 279 ENVLSLECIAEGLPTPSINWTKEDGELPINRTFYKNFKKT----LNIIHVSEADSGKYKC 334

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN-- 255
            A NSLG+V   + V V A AP    AP++     G+   L CR  G PKP ++W+ N  
Sbjct: 335 TARNSLGFVEHTISVTVKA-APYWITAPRNLVLSPGEDGTLICRANGNPKPNISWLINGV 393

Query: 256 QKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITD 312
             E+     +    GD +  +DV  + S  Y C A N+ G    +  + V       +T+
Sbjct: 394 PIEMAPDDPSRKIDGDTILFSDVQESSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTE 453

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
               Y+V   + A   C     P    +I W +G++    + E  +V  ++ +L +  + 
Sbjct: 454 VDLRYQVITDRPAMLDCAFFGSPIP--TIEWFKGTKGSVLQ-ENTYVFHDNGTLEIPVAQ 510

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQ 429
           +  +  YTC  + +L   +    L V+ P   ++ P  + ++Q    +   VS+      
Sbjct: 511 KDSADTYTCVVRNKLGMAKNDVHLEVKDPTRIIKQPE-YKIVQ----RGGRVSFECTVKH 565

Query: 430 --SLRGHFRGYKVQTWTEKDGEGSIRE---LIVNKGESTTTEVDKFVPASKNFARVLAFN 484
             +L       K       DG  SI     +I+N  +            S +     A  
Sbjct: 566 DPTLIATLTWLKDYGELPNDGRFSIDNDHLVIMNISDEDDATYTCVANTSLDIVSASAML 625

Query: 485 GAYNGPPSEIISFVTPEGV---PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY 541
                 P       TP  V   P     LE       +  L W+  E+ N  +  + I+Y
Sbjct: 626 RVVGKTP-------TPAPVYDRPNPPFDLELTSFLERSVQLSWIPGEENNSPITEFIIEY 678

Query: 542 Q-SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV 600
           + +     +      +P I     T+A+L  L P  KY   +      G    S+   Y 
Sbjct: 679 EDAFHEPGIWHHQTDVPGIQ----TTAELK-LSPYVKYSFRVIAVNSIGRSLPSEASEYY 733

Query: 601 ------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
                 P +NP  VEG GS P+NLVI+W  +   + N P  +Y++ WR+ +  + W    
Sbjct: 734 MTKAAEPEENPTAVEGIGSEPDNLVITWQPLKGFDSNGPGLQYKVSWRQKDGDDEWTS-- 791

Query: 655 VLDWRQSELVLANQPTFQPYEIKV 678
           V+    S+ +++  PTF PY +KV
Sbjct: 792 VVVANVSKYIVSGTPTFVPYLVKV 815



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 99/200 (49%), Gaps = 12/200 (6%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ APSN   + V+++  A V W PV P+S+RGH +GY++  W  K+     R  +  K
Sbjct: 838  LPMVAPSNVR-VNVVNSTLAEVHWEPVPPKSIRGHLKGYRIYYWKVKNSSKRNRRHVEKK 896

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVPG    L+ + 
Sbjct: 897  ILTFNGNKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASVDQVFNTPEGVPGAPLFLKIVN 956

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +K+Q +  T ++GPL++ ++P       TS  L  L
Sbjct: 957  PTLDSLTLEWDPPSHPNGILTAYTLKFQPINSTHELGPLVDLKIP----ANMTSLILRNL 1012

Query: 573  EPSTKYRIHLAGYTKAGDGA 592
              ST+Y+ +    T AG G+
Sbjct: 1013 SYSTRYKFYFYAQTAAGTGS 1032



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 141/589 (23%), Positives = 219/589 (37%), Gaps = 75/589 (12%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P   W  +GVPI     +PS +I     G +++   V+ S    Y C  S
Sbjct: 374 LICRANGNPKPNISWLINGVPIEMAPDDPSRKID----GDTILFSDVQESSSAVYQCNAS 429

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAE-------EETVTFECKASGLPEPEIHWV 160
           N  G   + +  ++VLA P     P  +   +       +     +C   G P P I W 
Sbjct: 430 NEYGYLLANAF-VNVLAEP-----PRILTEVDLRYQVITDRPAMLDCAFFGSPIPTIEWF 483

Query: 161 HNGK-PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
              K  + Q         G   I +     +DT  Y C   N LG    DV++ V     
Sbjct: 484 KGTKGSVLQENTYVFHDNGTLEIPVAQKDSADT--YTCVVRNKLGMAKNDVHLEV-KDPT 540

Query: 220 EITEAPKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKEL-TGGRYTILETGDLKITD 276
            I + P+ +    G  V   C V   P     + W+ +  EL   GR++I +   L I +
Sbjct: 541 RIIKQPEYKIVQRGGRVSFECTVKHDPTLIATLTWLKDYGELPNDGRFSI-DNDHLVIMN 599

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
           ++  D   YTC A   L     S  L V     +   P    V    +  F     S   
Sbjct: 600 ISDEDDATYTCVANTSLDIVSASAMLRV-----VGKTPTPAPVYDRPNPPFDLELTSFLE 654

Query: 337 LKLSIVWLRGSE---PI--------DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
             + + W+ G E   PI        D   EP           +  ++EL    Y      
Sbjct: 655 RSVQLSWIPGEENNSPITEFIIEYEDAFHEPGIWHHQTDVPGIQTTAELKLSPYV----- 709

Query: 386 ELDF-IEAQATLTVQVPLEAPS-----------NFTLIQVIDAK--KAVVSWNPVSPQSL 431
           +  F + A  ++   +P EA             N T ++ I ++    V++W P+     
Sbjct: 710 KYSFRVIAVNSIGRSLPSEASEYYMTKAAEPEENPTAVEGIGSEPDNLVITWQPLKGFDS 769

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGP 490
            G    YKV +W +KDG+     ++V N  +   +    FVP      +V A N     P
Sbjct: 770 NGPGLQYKV-SWRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LVKVQALNNVGFAP 825

Query: 491 PSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT 547
              II   + E +P    S +    + S+   + W  V P+   G L GY+I Y  VK +
Sbjct: 826 EPGIIIGHSGEDLPMVAPSNVRVNVVNSTLAEVHWEPVPPKSIRGHLKGYRIYYWKVKNS 885

Query: 548 --KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
             +    +E+     +   T   L GLEP + Y +++      G+G  S
Sbjct: 886 SKRNRRHVEKKILTFNGNKTHGMLPGLEPFSHYTLNVRVVNGKGEGPAS 934



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 174/439 (39%), Gaps = 61/439 (13%)

Query: 30  RHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDG----VPINPSDRI--SQG 83
           R +PK  Y+   +E       +E+ C   G P P   W+++G    +  +P  ++  + G
Sbjct: 44  RQSPKD-YIIDPRE------NIEIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVKMLPNSG 96

Query: 84  NYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEE 141
               S+ I+    + +G Y C   N  G A S +I +    +P +T E   +      + 
Sbjct: 97  TLVISITIEGKAETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEQITILKGQS 156

Query: 142 TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTG-NYGCNA 199
            V       GLP P I W+ N     + P + R   G N  +   N+   DT  +Y C A
Sbjct: 157 LVLPCRPPLGLPPPIIFWMDNS--FQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYA 214

Query: 200 T-NSLGYVYKDVYVNVLAH--------------------APEITEAPKDEYTVDGKT--- 235
             N    + +   ++V  H                    A    E P    T +G+T   
Sbjct: 215 RFNHTQTIQQKQPISVKVHSMDELNDTITANLSDSEFYGAKSYIERPPKLLTPEGRTSHK 274

Query: 236 -------VVLTCRVFGAPKPEVNWIHNQKELTGGR--YTILETGDLKITDVAFADSGEYT 286
                  + L C   G P P +NW     EL   R  Y   +   L I  V+ ADSG+Y 
Sbjct: 275 EELRENVLSLECIAEGLPTPSINWTKEDGELPINRTFYKNFKK-TLNIIHVSEADSGKYK 333

Query: 287 CFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           C ARN LG  + + S+TVK   +    P +  +  G+  T  C A  +P  K +I WL  
Sbjct: 334 CTARNSLGFVEHTISVTVKAAPYWITAPRNLVLSPGEDGTLICRANGNP--KPNISWLIN 391

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPS 406
             PI+   +    + +  ++  +   E  S  Y C A  E  ++ A A   V V  E P 
Sbjct: 392 GVPIEMAPDDPSRKIDGDTILFSDVQESSSAVYQCNASNEYGYLLANA--FVNVLAEPPR 449

Query: 407 NFTLI----QVIDAKKAVV 421
             T +    QVI  + A++
Sbjct: 450 ILTEVDLRYQVITDRPAML 468



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 139/345 (40%), Gaps = 59/345 (17%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  MSALEVPLDLVQPPTITRQSPKDYIIDPRENIEIQCEAKGKPPPSFSWTRNGTHF-DIDK 85

Query: 172 NPRRKVGPN------RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +P  K+ PN       ITIE   ++  G Y C A N  G    +  V   + +P  T+  
Sbjct: 86  DPLVKMLPNSGTLVISITIEGKAETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEK 145

Query: 226 KDEYTV-DGKTVVLTCRVFGAPKPE-VNWIHN--QKELTGGRYTILETGDLKITDVAFAD 281
            ++ T+  G+++VL CR      P  + W+ N  Q+     R +    GDL  ++V   D
Sbjct: 146 LEQITILKGQSLVLPCRPPLGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPED 205

Query: 282 SGE-YTCFAR-NKLGTAQGSGSLTVKEHTH------ITDQPEDYEVEAGQSATFRCNAVS 333
           + E Y C+AR N   T Q    ++VK H+       IT    D E    +S   R   + 
Sbjct: 206 TREDYICYARFNHTQTIQQKQPISVKVHSMDELNDTITANLSDSEFYGAKSYIERPPKLL 265

Query: 334 DP---------------SLKL--------SIVWLR--GSEPIDFESEPRFVQSNDYSLTV 368
            P               SL+         SI W +  G  PI+      F ++   +L +
Sbjct: 266 TPEGRTSHKEELRENVLSLECIAEGLPTPSINWTKEDGELPINR----TFYKNFKKTLNI 321

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
              SE DSG+Y C A+  L F+E   ++TV+     + AP N  L
Sbjct: 322 IHVSEADSGKYKCTARNSLGFVEHTISVTVKAAPYWITAPRNLVL 366


>gi|334348522|ref|XP_001362906.2| PREDICTED: neuronal cell adhesion molecule isoform 2 [Monodelphis
           domestica]
          Length = 1256

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/368 (36%), Positives = 190/368 (51%), Gaps = 16/368 (4%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           LR   + L CI  G P P   W+K DG +PIN   R    N+ K+L I HV  +D G Y 
Sbjct: 277 LRENVLSLECIAEGLPTPSINWTKEDGELPIN---RTFYKNFKKTLNIIHVSEADSGKYK 333

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G  + ++I ++V AAPY+   P  +  +  E  T  C+A+G P+P I W+ NG
Sbjct: 334 CTARNSLGFVE-HTISVTVKAAPYWITAPRNLVLSPGEDGTLICRANGNPKPNISWLING 392

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-T 222
            PI  AP +P RK+  + I   ++++S +  Y CNA+N  GY+  + +VNVLA  P I T
Sbjct: 393 VPIEMAPDDPSRKIDGDTILFSDVQESSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT 452

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           E       +  +  +L C  FG+P P + W    K   L    Y   + G L+I  VA  
Sbjct: 453 EVDLRYQVITDRPAMLDCAFFGSPIPTIEWFKGTKGSVLQENTYVFHDNGTLEIP-VAQK 511

Query: 281 DSGE-YTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           DS + YTC  RNKLG A+    L VK+ T I  QPE   V+ G   +F C    DP+L  
Sbjct: 512 DSADTYTCVVRNKLGMAKNDVHLEVKDPTRIIKQPEYKIVQRGGRVSFECTVKHDPTLIA 571

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV- 398
           ++ WL+     +  ++ RF   ND+ L +   S+ D   YTC A T LD + A A L V 
Sbjct: 572 TLTWLKDYG--ELPNDGRFSIDNDH-LVIMNISDEDDATYTCVANTSLDIVSASAMLRVV 628

Query: 399 -QVPLEAP 405
            + P  AP
Sbjct: 629 GKTPTPAP 636



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 141/564 (25%), Positives = 235/564 (41%), Gaps = 52/564 (9%)

Query: 140 EETVTFECKASGLPEPEIHWV-HNGK-PISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           E  ++ EC A GLP P I+W   +G+ PI++      +K     + I ++ ++D+G Y C
Sbjct: 279 ENVLSLECIAEGLPTPSINWTKEDGELPINRTFYKNFKKT----LNIIHVSEADSGKYKC 334

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK 257
            A NSLG+V   + V V A AP    AP++     G+   L CR  G PKP ++W+ N  
Sbjct: 335 TARNSLGFVEHTISVTVKA-APYWITAPRNLVLSPGEDGTLICRANGNPKPNISWLINGV 393

Query: 258 --ELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITD 312
             E+     +    GD +  +DV  + S  Y C A N+ G    +  + V       +T+
Sbjct: 394 PIEMAPDDPSRKIDGDTILFSDVQESSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTE 453

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
               Y+V   + A   C     P    +I W +G++    + E  +V  ++ +L +  + 
Sbjct: 454 VDLRYQVITDRPAMLDCAFFGSPIP--TIEWFKGTKGSVLQ-ENTYVFHDNGTLEIPVAQ 510

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQ 429
           +  +  YTC  + +L   +    L V+ P   ++ P  + ++Q    +   VS+      
Sbjct: 511 KDSADTYTCVVRNKLGMAKNDVHLEVKDPTRIIKQPE-YKIVQ----RGGRVSFECTVKH 565

Query: 430 --SLRGHFRGYKVQTWTEKDGEGSIRE---LIVNKGESTTTEVDKFVPASKNFARVLAFN 484
             +L       K       DG  SI     +I+N  +            S +     A  
Sbjct: 566 DPTLIATLTWLKDYGELPNDGRFSIDNDHLVIMNISDEDDATYTCVANTSLDIVSASAML 625

Query: 485 GAYNGPPSEIISFVTPEGV---PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY 541
                 P       TP  V   P     LE       +  L W+  E+ N  +  + I+Y
Sbjct: 626 RVVGKTP-------TPAPVYDRPNPPFDLELTSFLERSVQLSWIPGEENNSPITEFIIEY 678

Query: 542 Q-SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV 600
           + +     +      +P I     T+A+L  L P  KY   +      G    S+   Y 
Sbjct: 679 EDAFHEPGIWHHQTDVPGIQ----TTAELK-LSPYVKYSFRVIAVNSIGRSLPSEASEYY 733

Query: 601 ------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
                 P +NP  VEG GS P+NLVI+W  +   + N P  +Y++ WR+ +  + W    
Sbjct: 734 MTKAAEPEENPTAVEGIGSEPDNLVITWQPLKGFDSNGPGLQYKVSWRQKDGDDEWTS-- 791

Query: 655 VLDWRQSELVLANQPTFQPYEIKV 678
           V+    S+ +++  PTF PY +KV
Sbjct: 792 VVVANVSKYIVSGTPTFVPYLVKV 815



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 99/200 (49%), Gaps = 12/200 (6%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ APSN   + V+++  A V W PV P+S+RGH +GY++  W  K+     R  +  K
Sbjct: 838  LPMVAPSNVR-VNVVNSTLAEVHWEPVPPKSIRGHLKGYRIYYWKVKNSSKRNRRHVEKK 896

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVPG    L+ + 
Sbjct: 897  ILTFNGNKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASVDQVFNTPEGVPGAPLFLKIVN 956

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +K+Q +  T ++GPL++ ++P       TS  L  L
Sbjct: 957  PTLDSLTLEWDPPSHPNGILTAYTLKFQPINSTHELGPLVDLKIP----ANMTSLILRNL 1012

Query: 573  EPSTKYRIHLAGYTKAGDGA 592
              ST+Y+ +    T AG G+
Sbjct: 1013 SYSTRYKFYFYAQTAAGTGS 1032



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 141/589 (23%), Positives = 219/589 (37%), Gaps = 75/589 (12%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P   W  +GVPI     +PS +I     G +++   V+ S    Y C  S
Sbjct: 374 LICRANGNPKPNISWLINGVPIEMAPDDPSRKID----GDTILFSDVQESSSAVYQCNAS 429

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAE-------EETVTFECKASGLPEPEIHWV 160
           N  G   + +  ++VLA P     P  +   +       +     +C   G P P I W 
Sbjct: 430 NEYGYLLANAF-VNVLAEP-----PRILTEVDLRYQVITDRPAMLDCAFFGSPIPTIEWF 483

Query: 161 HNGK-PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
              K  + Q         G   I +     +DT  Y C   N LG    DV++ V     
Sbjct: 484 KGTKGSVLQENTYVFHDNGTLEIPVAQKDSADT--YTCVVRNKLGMAKNDVHLEV-KDPT 540

Query: 220 EITEAPKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKEL-TGGRYTILETGDLKITD 276
            I + P+ +    G  V   C V   P     + W+ +  EL   GR++I +   L I +
Sbjct: 541 RIIKQPEYKIVQRGGRVSFECTVKHDPTLIATLTWLKDYGELPNDGRFSI-DNDHLVIMN 599

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
           ++  D   YTC A   L     S  L V     +   P    V    +  F     S   
Sbjct: 600 ISDEDDATYTCVANTSLDIVSASAMLRV-----VGKTPTPAPVYDRPNPPFDLELTSFLE 654

Query: 337 LKLSIVWLRGSE---PI--------DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
             + + W+ G E   PI        D   EP           +  ++EL    Y      
Sbjct: 655 RSVQLSWIPGEENNSPITEFIIEYEDAFHEPGIWHHQTDVPGIQTTAELKLSPYV----- 709

Query: 386 ELDF-IEAQATLTVQVPLEAPS-----------NFTLIQVIDAK--KAVVSWNPVSPQSL 431
           +  F + A  ++   +P EA             N T ++ I ++    V++W P+     
Sbjct: 710 KYSFRVIAVNSIGRSLPSEASEYYMTKAAEPEENPTAVEGIGSEPDNLVITWQPLKGFDS 769

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGP 490
            G    YKV +W +KDG+     ++V N  +   +    FVP      +V A N     P
Sbjct: 770 NGPGLQYKV-SWRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LVKVQALNNVGFAP 825

Query: 491 PSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT 547
              II   + E +P    S +    + S+   + W  V P+   G L GY+I Y  VK +
Sbjct: 826 EPGIIIGHSGEDLPMVAPSNVRVNVVNSTLAEVHWEPVPPKSIRGHLKGYRIYYWKVKNS 885

Query: 548 --KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
             +    +E+     +   T   L GLEP + Y +++      G+G  S
Sbjct: 886 SKRNRRHVEKKILTFNGNKTHGMLPGLEPFSHYTLNVRVVNGKGEGPAS 934



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 174/439 (39%), Gaps = 61/439 (13%)

Query: 30  RHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDG----VPINPSDRI--SQG 83
           R +PK  Y+   +E       +E+ C   G P P   W+++G    +  +P  ++  + G
Sbjct: 44  RQSPKD-YIIDPRE------NIEIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVKMLPNSG 96

Query: 84  NYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEE 141
               S+ I+    + +G Y C   N  G A S +I +    +P +T E   +      + 
Sbjct: 97  TLVISITIEGKAETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEQITILKGQS 156

Query: 142 TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTG-NYGCNA 199
            V       GLP P I W+ N     + P + R   G N  +   N+   DT  +Y C A
Sbjct: 157 LVLPCRPPLGLPPPIIFWMDNS--FQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYA 214

Query: 200 T-NSLGYVYKDVYVNVLAH--------------------APEITEAPKDEYTVDGKT--- 235
             N    + +   ++V  H                    A    E P    T +G+T   
Sbjct: 215 RFNHTQTIQQKQPISVKVHSMDELNDTITANLSDSEFYGAKSYIERPPKLLTPEGRTSHK 274

Query: 236 -------VVLTCRVFGAPKPEVNWIHNQKELTGGR--YTILETGDLKITDVAFADSGEYT 286
                  + L C   G P P +NW     EL   R  Y   +   L I  V+ ADSG+Y 
Sbjct: 275 EELRENVLSLECIAEGLPTPSINWTKEDGELPINRTFYKNFKK-TLNIIHVSEADSGKYK 333

Query: 287 CFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           C ARN LG  + + S+TVK   +    P +  +  G+  T  C A  +P  K +I WL  
Sbjct: 334 CTARNSLGFVEHTISVTVKAAPYWITAPRNLVLSPGEDGTLICRANGNP--KPNISWLIN 391

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPS 406
             PI+   +    + +  ++  +   E  S  Y C A  E  ++ A A   V V  E P 
Sbjct: 392 GVPIEMAPDDPSRKIDGDTILFSDVQESSSAVYQCNASNEYGYLLANA--FVNVLAEPPR 449

Query: 407 NFTLI----QVIDAKKAVV 421
             T +    QVI  + A++
Sbjct: 450 ILTEVDLRYQVITDRPAML 468



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 139/345 (40%), Gaps = 59/345 (17%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  MSALEVPLDLVQPPTITRQSPKDYIIDPRENIEIQCEAKGKPPPSFSWTRNGTHF-DIDK 85

Query: 172 NPRRKVGPN------RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +P  K+ PN       ITIE   ++  G Y C A N  G    +  V   + +P  T+  
Sbjct: 86  DPLVKMLPNSGTLVISITIEGKAETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEK 145

Query: 226 KDEYTV-DGKTVVLTCRVFGAPKPE-VNWIHN--QKELTGGRYTILETGDLKITDVAFAD 281
            ++ T+  G+++VL CR      P  + W+ N  Q+     R +    GDL  ++V   D
Sbjct: 146 LEQITILKGQSLVLPCRPPLGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPED 205

Query: 282 SGE-YTCFAR-NKLGTAQGSGSLTVKEHTH------ITDQPEDYEVEAGQSATFRCNAVS 333
           + E Y C+AR N   T Q    ++VK H+       IT    D E    +S   R   + 
Sbjct: 206 TREDYICYARFNHTQTIQQKQPISVKVHSMDELNDTITANLSDSEFYGAKSYIERPPKLL 265

Query: 334 DP---------------SLKL--------SIVWLR--GSEPIDFESEPRFVQSNDYSLTV 368
            P               SL+         SI W +  G  PI+      F ++   +L +
Sbjct: 266 TPEGRTSHKEELRENVLSLECIAEGLPTPSINWTKEDGELPINR----TFYKNFKKTLNI 321

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
              SE DSG+Y C A+  L F+E   ++TV+     + AP N  L
Sbjct: 322 IHVSEADSGKYKCTARNSLGFVEHTISVTVKAAPYWITAPRNLVL 366


>gi|1842431|gb|AAB47755.1| ankyrin binding cell adhesion molecule NrCAM [Rattus norvegicus]
          Length = 1215

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 162/524 (30%), Positives = 239/524 (45%), Gaps = 38/524 (7%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           LR   + L CI  G P P   W K DG +P+N   R    N+ K+L I HV  +D G+Y 
Sbjct: 284 LRGNVLSLECIAEGLPTPVIYWIKEDGTLPVN---RTFYRNFKKTLQIIHVSEADSGNYQ 340

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A  ++I ++V AAPY+ V P  +  +  E  T  C+A+G P+P I W+ NG
Sbjct: 341 CIAKNALG-AVHHTISVTVKAAPYWIVAPHNLVLSPGENGTLICRANGNPKPRISWLTNG 399

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+  A  +P RK+  + I   N+++S +  Y CNA+N  GY+  + +VNVLA  P I  
Sbjct: 400 VPVEIALDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILT 459

Query: 224 APKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFA 280
           +    Y V   +  +L C  FG+P P + W    K   L    Y + + G L+I      
Sbjct: 460 SANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALHEDIYVLHDNGTLEIPVAQKD 519

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            +G YTC ARNKLG A+    L +K+ T    QP    V+ G   +F C    D +L  +
Sbjct: 520 STGTYTCVARNKLGMAKNEVHLEIKDPTRFIKQPGYAVVQRGSKVSFECKVKHDHTLIPT 579

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I+WL+ +   +  ++ RF    D+ L V+   + D G YTC A T LD + A A L V  
Sbjct: 580 ILWLKDNG--ELPNDERFSVDKDH-LVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVA 636

Query: 401 PLEAPS----------NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG 450
           P   P+          +  L   +D K   ++W P    +       + ++        G
Sbjct: 637 PTPTPAPIYDVPNPPFDLELTNQLD-KSVQLTWTPGDDNN--SPITKFIIEYEDAMHEAG 693

Query: 451 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPG 505
             R      G  TT ++ K  P      RV+A N      PSE     +     P+  P 
Sbjct: 694 LWRHQAEVSGTQTTAQL-KLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPT 752

Query: 506 TVQSLEAIPLGSSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
            V+ L   P       + W KP    Q NG  + YK+ ++   G
Sbjct: 753 AVEGLGTEP---DNLVITW-KPLNGFQSNGPGLQYKVSWRQKDG 792



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 136/560 (24%), Positives = 236/560 (42%), Gaps = 50/560 (8%)

Query: 143 VTFECKASGLPEPEIHWVHNGK--PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
           ++ EC A GLP P I+W+      P+++      +K     + I ++ ++D+GNY C A 
Sbjct: 289 LSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKKT----LQIIHVSEADSGNYQCIAK 344

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QKE 258
           N+LG V+  + V V A AP    AP +     G+   L CR  G PKP ++W+ N    E
Sbjct: 345 NALGAVHHTISVTVKA-APYWIVAPHNLVLSPGENGTLICRANGNPKPRISWLTNGVPVE 403

Query: 259 LTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPE 315
           +     +    GD +  ++V  + S  Y C A NK G    +  + V       +T    
Sbjct: 404 IALDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILTSANT 463

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
            Y+V A + A   C     P    +I W +G++      E  +V  ++ +L +  + +  
Sbjct: 464 LYQVIANRPALLDCAFFGSP--MPTIEWFKGTKGSALH-EDIYVLHDNGTLEIPVAQKDS 520

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           +G YTC A+ +L   + +  L ++ P   ++ P  + ++Q    + + VS+       ++
Sbjct: 521 TGTYTCVARNKLGMAKNEVHLEIKDPTRFIKQPG-YAVVQ----RGSKVSFE----CKVK 571

Query: 433 GHFRGYKVQTWTEKDGEGSIRE-LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                     W + +GE    E   V+K     ++V      +   A     +       
Sbjct: 572 HDHTLIPTILWLKDNGELPNDERFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVSA--- 628

Query: 492 SEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
           S ++  V P   P  +  +   P           +  L W   +  N  +  + I+Y+  
Sbjct: 629 SAVLRVVAPTPTPAPIYDVPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYED- 687

Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV 600
                  L      +S  T T+A+L  L P   Y   +      G      A  +YL   
Sbjct: 688 -AMHEAGLWRHQAEVSG-TQTTAQLK-LSPYVNYSFRVMAENSIGRSVPSEASEQYLTKA 744

Query: 601 --PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDW 658
             P +NP  VEG G+ P+NLVI+W  +   + N P  +Y++ WR+ +  + W    V+  
Sbjct: 745 AEPDQNPTAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTS--VVVA 802

Query: 659 RQSELVLANQPTFQPYEIKV 678
             S+ +++  PTF PY IKV
Sbjct: 803 NVSKYIVSGTPTFVPYLIKV 822



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 96/201 (47%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ AP N   + V+++  A   W+PV P+S+RGH +GY++  W  +      R  I  K
Sbjct: 845  LPMVAPGNVR-VSVVNSTLAEAHWDPVPPKSVRGHLQGYRIYYWKAQSSSKRNRRHIEKK 903

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVP    SL+ + 
Sbjct: 904  ILTFQGSKTHGMLPGLQPYSHYVLNVRVVNGKGEGPASADRGFHTPEGVPSAPSSLKIVN 963

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +KYQ +  T ++GPL++ ++P       T   L  L
Sbjct: 964  PTLDSLTLEWDPPSHPNGILTEYILKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 1019

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +    T  G G++
Sbjct: 1020 NFSTRYKFYFYAQTSVGSGSQ 1040



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 77/317 (24%), Positives = 121/317 (38%), Gaps = 53/317 (16%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   + I  +   K++T  G Y
Sbjct: 63  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGSGTLVINIMSEGKAETYEGVY 122

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +  V   + +P  T+   +   +  G+++VL CR   G P   + W+
Sbjct: 123 QCTARNERGAAVSNNIVVRPSRSPLWTKERLEPIILRSGQSLVLPCRPPIGLPPAIIFWM 182

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-------------------- 290
            N  Q+     R +    GDL  ++V   D+ E Y C+AR                    
Sbjct: 183 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISLKVISV 242

Query: 291 --------NKLGTAQGSGSLTVKEHTHITDQPEDYEVEA----GQSATFRCNAVSDPSLK 338
                     L   +  G+ + KE       PE  E       G   +  C A   P+  
Sbjct: 243 DELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNESHKEELRGNVLSLECIAEGLPT-- 300

Query: 339 LSIVWLR--GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             I W++  G+ P++      F ++   +L +   SE DSG Y C A+  L  +    ++
Sbjct: 301 PVIYWIKEDGTLPVNR----TFYRNFKKTLQIIHVSEADSGNYQCIAKNALGAVHHTISV 356

Query: 397 TVQVP---LEAPSNFTL 410
           TV+     + AP N  L
Sbjct: 357 TVKAAPYWIVAPHNLVL 373


>gi|334348520|ref|XP_001362822.2| PREDICTED: neuronal cell adhesion molecule isoform 1 [Monodelphis
           domestica]
          Length = 1298

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/368 (36%), Positives = 190/368 (51%), Gaps = 16/368 (4%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           LR   + L CI  G P P   W+K DG +PIN   R    N+ K+L I HV  +D G Y 
Sbjct: 277 LRENVLSLECIAEGLPTPSINWTKEDGELPIN---RTFYKNFKKTLNIIHVSEADSGKYK 333

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G  + ++I ++V AAPY+   P  +  +  E  T  C+A+G P+P I W+ NG
Sbjct: 334 CTARNSLGFVE-HTISVTVKAAPYWITAPRNLVLSPGEDGTLICRANGNPKPNISWLING 392

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-T 222
            PI  AP +P RK+  + I   ++++S +  Y CNA+N  GY+  + +VNVLA  P I T
Sbjct: 393 VPIEMAPDDPSRKIDGDTILFSDVQESSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT 452

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           E       +  +  +L C  FG+P P + W    K   L    Y   + G L+I  VA  
Sbjct: 453 EVDLRYQVITDRPAMLDCAFFGSPIPTIEWFKGTKGSVLQENTYVFHDNGTLEIP-VAQK 511

Query: 281 DSGE-YTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           DS + YTC  RNKLG A+    L VK+ T I  QPE   V+ G   +F C    DP+L  
Sbjct: 512 DSADTYTCVVRNKLGMAKNDVHLEVKDPTRIIKQPEYKIVQRGGRVSFECTVKHDPTLIA 571

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV- 398
           ++ WL+     +  ++ RF   ND+ L +   S+ D   YTC A T LD + A A L V 
Sbjct: 572 TLTWLKDYG--ELPNDGRFSIDNDH-LVIMNISDEDDATYTCVANTSLDIVSASAMLRVV 628

Query: 399 -QVPLEAP 405
            + P  AP
Sbjct: 629 GKTPTPAP 636



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 141/564 (25%), Positives = 235/564 (41%), Gaps = 52/564 (9%)

Query: 140 EETVTFECKASGLPEPEIHWV-HNGK-PISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           E  ++ EC A GLP P I+W   +G+ PI++      +K     + I ++ ++D+G Y C
Sbjct: 279 ENVLSLECIAEGLPTPSINWTKEDGELPINRTFYKNFKKT----LNIIHVSEADSGKYKC 334

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK 257
            A NSLG+V   + V V A AP    AP++     G+   L CR  G PKP ++W+ N  
Sbjct: 335 TARNSLGFVEHTISVTVKA-APYWITAPRNLVLSPGEDGTLICRANGNPKPNISWLINGV 393

Query: 258 --ELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITD 312
             E+     +    GD +  +DV  + S  Y C A N+ G    +  + V       +T+
Sbjct: 394 PIEMAPDDPSRKIDGDTILFSDVQESSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTE 453

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
               Y+V   + A   C     P    +I W +G++    + E  +V  ++ +L +  + 
Sbjct: 454 VDLRYQVITDRPAMLDCAFFGSPIP--TIEWFKGTKGSVLQ-ENTYVFHDNGTLEIPVAQ 510

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQ 429
           +  +  YTC  + +L   +    L V+ P   ++ P  + ++Q    +   VS+      
Sbjct: 511 KDSADTYTCVVRNKLGMAKNDVHLEVKDPTRIIKQPE-YKIVQ----RGGRVSFECTVKH 565

Query: 430 --SLRGHFRGYKVQTWTEKDGEGSIRE---LIVNKGESTTTEVDKFVPASKNFARVLAFN 484
             +L       K       DG  SI     +I+N  +            S +     A  
Sbjct: 566 DPTLIATLTWLKDYGELPNDGRFSIDNDHLVIMNISDEDDATYTCVANTSLDIVSASAML 625

Query: 485 GAYNGPPSEIISFVTPEGV---PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY 541
                 P       TP  V   P     LE       +  L W+  E+ N  +  + I+Y
Sbjct: 626 RVVGKTP-------TPAPVYDRPNPPFDLELTSFLERSVQLSWIPGEENNSPITEFIIEY 678

Query: 542 Q-SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV 600
           + +     +      +P I     T+A+L  L P  KY   +      G    S+   Y 
Sbjct: 679 EDAFHEPGIWHHQTDVPGIQ----TTAELK-LSPYVKYSFRVIAVNSIGRSLPSEASEYY 733

Query: 601 ------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
                 P +NP  VEG GS P+NLVI+W  +   + N P  +Y++ WR+ +  + W    
Sbjct: 734 MTKAAEPEENPTAVEGIGSEPDNLVITWQPLKGFDSNGPGLQYKVSWRQKDGDDEWTS-- 791

Query: 655 VLDWRQSELVLANQPTFQPYEIKV 678
           V+    S+ +++  PTF PY +KV
Sbjct: 792 VVVANVSKYIVSGTPTFVPYLVKV 815



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 99/200 (49%), Gaps = 12/200 (6%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            +P+ APSN   + V+++  A V W PV P+S+RGH +GY++  W  K+     R  +  K
Sbjct: 838  LPMVAPSNVR-VNVVNSTLAEVHWEPVPPKSIRGHLKGYRIYYWKVKNSSKRNRRHVEKK 896

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                 G  T   +    P S     V   NG   GP S    F TPEGVPG    L+ + 
Sbjct: 897  ILTFNGNKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASVDQVFNTPEGVPGAPLFLKIVN 956

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
                +  L+W  P  PNG+L  Y +K+Q +  T ++GPL++ ++P       TS  L  L
Sbjct: 957  PTLDSLTLEWDPPSHPNGILTAYTLKFQPINSTHELGPLVDLKIP----ANMTSLILRNL 1012

Query: 573  EPSTKYRIHLAGYTKAGDGA 592
              ST+Y+ +    T AG G+
Sbjct: 1013 SYSTRYKFYFYAQTAAGTGS 1032



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 141/589 (23%), Positives = 219/589 (37%), Gaps = 75/589 (12%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P   W  +GVPI     +PS +I     G +++   V+ S    Y C  S
Sbjct: 374 LICRANGNPKPNISWLINGVPIEMAPDDPSRKID----GDTILFSDVQESSSAVYQCNAS 429

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAE-------EETVTFECKASGLPEPEIHWV 160
           N  G   + +  ++VLA P     P  +   +       +     +C   G P P I W 
Sbjct: 430 NEYGYLLANAF-VNVLAEP-----PRILTEVDLRYQVITDRPAMLDCAFFGSPIPTIEWF 483

Query: 161 HNGK-PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
              K  + Q         G   I +     +DT  Y C   N LG    DV++ V     
Sbjct: 484 KGTKGSVLQENTYVFHDNGTLEIPVAQKDSADT--YTCVVRNKLGMAKNDVHLEV-KDPT 540

Query: 220 EITEAPKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKEL-TGGRYTILETGDLKITD 276
            I + P+ +    G  V   C V   P     + W+ +  EL   GR++I +   L I +
Sbjct: 541 RIIKQPEYKIVQRGGRVSFECTVKHDPTLIATLTWLKDYGELPNDGRFSI-DNDHLVIMN 599

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
           ++  D   YTC A   L     S  L V     +   P    V    +  F     S   
Sbjct: 600 ISDEDDATYTCVANTSLDIVSASAMLRV-----VGKTPTPAPVYDRPNPPFDLELTSFLE 654

Query: 337 LKLSIVWLRGSE---PI--------DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
             + + W+ G E   PI        D   EP           +  ++EL    Y      
Sbjct: 655 RSVQLSWIPGEENNSPITEFIIEYEDAFHEPGIWHHQTDVPGIQTTAELKLSPYV----- 709

Query: 386 ELDF-IEAQATLTVQVPLEAPS-----------NFTLIQVIDAK--KAVVSWNPVSPQSL 431
           +  F + A  ++   +P EA             N T ++ I ++    V++W P+     
Sbjct: 710 KYSFRVIAVNSIGRSLPSEASEYYMTKAAEPEENPTAVEGIGSEPDNLVITWQPLKGFDS 769

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGP 490
            G    YKV +W +KDG+     ++V N  +   +    FVP      +V A N     P
Sbjct: 770 NGPGLQYKV-SWRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LVKVQALNNVGFAP 825

Query: 491 PSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT 547
              II   + E +P    S +    + S+   + W  V P+   G L GY+I Y  VK +
Sbjct: 826 EPGIIIGHSGEDLPMVAPSNVRVNVVNSTLAEVHWEPVPPKSIRGHLKGYRIYYWKVKNS 885

Query: 548 --KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
             +    +E+     +   T   L GLEP + Y +++      G+G  S
Sbjct: 886 SKRNRRHVEKKILTFNGNKTHGMLPGLEPFSHYTLNVRVVNGKGEGPAS 934



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 174/439 (39%), Gaps = 61/439 (13%)

Query: 30  RHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDG----VPINPSDRI--SQG 83
           R +PK  Y+   +E       +E+ C   G P P   W+++G    +  +P  ++  + G
Sbjct: 44  RQSPKD-YIIDPRE------NIEIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVKMLPNSG 96

Query: 84  NYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEE 141
               S+ I+    + +G Y C   N  G A S +I +    +P +T E   +      + 
Sbjct: 97  TLVISITIEGKAETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEQITILKGQS 156

Query: 142 TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTG-NYGCNA 199
            V       GLP P I W+ N     + P + R   G N  +   N+   DT  +Y C A
Sbjct: 157 LVLPCRPPLGLPPPIIFWMDNS--FQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYA 214

Query: 200 T-NSLGYVYKDVYVNVLAH--------------------APEITEAPKDEYTVDGKT--- 235
             N    + +   ++V  H                    A    E P    T +G+T   
Sbjct: 215 RFNHTQTIQQKQPISVKVHSMDELNDTITANLSDSEFYGAKSYIERPPKLLTPEGRTSHK 274

Query: 236 -------VVLTCRVFGAPKPEVNWIHNQKELTGGR--YTILETGDLKITDVAFADSGEYT 286
                  + L C   G P P +NW     EL   R  Y   +   L I  V+ ADSG+Y 
Sbjct: 275 EELRENVLSLECIAEGLPTPSINWTKEDGELPINRTFYKNFKK-TLNIIHVSEADSGKYK 333

Query: 287 CFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           C ARN LG  + + S+TVK   +    P +  +  G+  T  C A  +P  K +I WL  
Sbjct: 334 CTARNSLGFVEHTISVTVKAAPYWITAPRNLVLSPGEDGTLICRANGNP--KPNISWLIN 391

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPS 406
             PI+   +    + +  ++  +   E  S  Y C A  E  ++ A A   V V  E P 
Sbjct: 392 GVPIEMAPDDPSRKIDGDTILFSDVQESSSAVYQCNASNEYGYLLANA--FVNVLAEPPR 449

Query: 407 NFTLI----QVIDAKKAVV 421
             T +    QVI  + A++
Sbjct: 450 ILTEVDLRYQVITDRPAML 468



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 139/345 (40%), Gaps = 59/345 (17%)

Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           +S L  P   V+P  I             E +  +C+A G P P   W  NG        
Sbjct: 27  MSALEVPLDLVQPPTITRQSPKDYIIDPRENIEIQCEAKGKPPPSFSWTRNGTHF-DIDK 85

Query: 172 NPRRKVGPN------RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +P  K+ PN       ITIE   ++  G Y C A N  G    +  V   + +P  T+  
Sbjct: 86  DPLVKMLPNSGTLVISITIEGKAETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEK 145

Query: 226 KDEYTV-DGKTVVLTCRVFGAPKPE-VNWIHN--QKELTGGRYTILETGDLKITDVAFAD 281
            ++ T+  G+++VL CR      P  + W+ N  Q+     R +    GDL  ++V   D
Sbjct: 146 LEQITILKGQSLVLPCRPPLGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPED 205

Query: 282 SGE-YTCFAR-NKLGTAQGSGSLTVKEHTH------ITDQPEDYEVEAGQSATFRCNAVS 333
           + E Y C+AR N   T Q    ++VK H+       IT    D E    +S   R   + 
Sbjct: 206 TREDYICYARFNHTQTIQQKQPISVKVHSMDELNDTITANLSDSEFYGAKSYIERPPKLL 265

Query: 334 DP---------------SLKL--------SIVWLR--GSEPIDFESEPRFVQSNDYSLTV 368
            P               SL+         SI W +  G  PI+      F ++   +L +
Sbjct: 266 TPEGRTSHKEELRENVLSLECIAEGLPTPSINWTKEDGELPINR----TFYKNFKKTLNI 321

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
              SE DSG+Y C A+  L F+E   ++TV+     + AP N  L
Sbjct: 322 IHVSEADSGKYKCTARNSLGFVEHTISVTVKAAPYWITAPRNLVL 366


>gi|395845548|ref|XP_003795492.1| PREDICTED: protein sidekick-1 [Otolemur garnettii]
          Length = 2210

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 188/624 (30%), Positives = 278/624 (44%), Gaps = 42/624 (6%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
           + V   + ++ L CI    P+ +    W ++GV      RI+ G  ++G+ L I +   +
Sbjct: 298 RSVVAGSSEITLECIASARPVEELSVSWKRNGV------RITSGLHSFGRRLTISNPTSA 351

Query: 98  DQGSYTCEVS---NGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLP 153
           D G+Y CE +   +    A++ +  LS++  PYFT EPE  I    EETV   C+A G+P
Sbjct: 352 DTGAYVCEATLRGSSFEPARARAF-LSIIEPPYFTAEPESRILVEVEETVDIICQAMGVP 410

Query: 154 EPEIHWVHNGKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYV 212
            P + W  +   IS+   NPR KV     + I+ L   D+G + C A+N  G +    Y+
Sbjct: 411 LPTLQWYKDAVSISKLQ-NPRYKVLSSGGLRIQKLCPEDSGIFQCFASNEGGEIQTHTYL 469

Query: 213 NVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTIL 267
           +V   AP  T+ P+D    DG T +L C V GAPKP + W      L  G     R+ +L
Sbjct: 470 DVTNIAPVFTQRPEDTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVQIPRFMLL 529

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
           E+G L+IT V   D+G YTC+A N  G+   S  L V   T I   P+D  V  G  A  
Sbjct: 530 ESGGLQITPVFIQDAGNYTCYAANSEGSLNASAMLIVWNRTFIVRPPKDQVVIKGTMAML 589

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
           RC A  DP + LS +W + +  I   S  R V   D SL ++++   D G YTC   +E 
Sbjct: 590 RCGATHDPRITLSYIWRKDNMVITPSSSSRIVVEKDGSLLISQTWSGDIGDYTCNIISEG 649

Query: 388 DFIEAQATLTVQVPLEAPSNFTLI-QVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
                 A L V     +P N         +   ++SW  V P         Y V+  +E 
Sbjct: 650 GNDSRTARLEVIELPHSPQNLLASPNSSHSNTVMLSW--VRPFDGNSPILYYIVEL-SEN 706

Query: 447 DGEGSIRELIVNKG-ESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVP 504
           +    +   + N G E T   V    PA     RV A N    G  S E    + PE  P
Sbjct: 707 NSPWKVH--LSNVGPEMTGITVSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPP 764

Query: 505 GT-VQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
               +++ A    + +  ++W  P +   NGVL GY ++Y+ + G   G   +R   I+ 
Sbjct: 765 SAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYR-LAGLP-GEYQQR--NITS 820

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEGRGSTPN 616
           P      +  L   T+Y I +A Y  AG G  S+      L  VP   P NV+       
Sbjct: 821 PEVNYCLVTDLIIWTQYEIQVAAYNGAGLGIFSRAVTEYTLQGVPTAPPQNVQMEAVNST 880

Query: 617 NLVISWTAMPEIEHNAPHFKYRIF 640
            +   WT  P+   N  +  Y++ 
Sbjct: 881 TIQFLWTPPPQQFINGINQGYKLL 904



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 172/692 (24%), Positives = 271/692 (39%), Gaps = 93/692 (13%)

Query: 38  VTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           + ++K ++  +  V         P PQ  W ++G  I PS+RI+       L+I     S
Sbjct: 192 IDQRKMISQGHAAVLNLMPITSCPRPQVTWFREGHKIIPSNRIAI-TLENQLVILATTAS 250

Query: 98  DQGSYTCEVSN-GVGEAK-SYSIDLSV--------LAAPYFTVEP--EFINAAEEETVTF 145
           D G+Y  +  N   GE K S  I LS+          AP   V P    + A   E +T 
Sbjct: 251 DAGAYYVQAVNEKNGENKTSPFIYLSIARDIGAPETTAPTIVVPPGNRSVVAGSSE-ITL 309

Query: 146 ECKASGLP--EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT--- 200
           EC AS  P  E  + W  NG  I+    +  R     R+TI N   +DTG Y C AT   
Sbjct: 310 ECIASARPVEELSVSWKRNGVRITSGLHSFGR-----RLTISNPTSADTGAYVCEATLRG 364

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ--- 256
           +S        +++++   P  T  P+    V+  +TV + C+  G P P + W  +    
Sbjct: 365 SSFEPARARAFLSII-EPPYFTAEPESRILVEVEETVDIICQAMGVPLPTLQWYKDAVSI 423

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI-TDQPE 315
            +L   RY +L +G L+I  +   DSG + CFA N+ G  Q    L V     + T +PE
Sbjct: 424 SKLQNPRYKVLSSGGLRIQKLCPEDSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRPE 483

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSE 373
           D  V  G +A  RC     P  K +I W R +  +   S   PRF+      L +T    
Sbjct: 484 DTTVTDGMTAILRCEVSGAP--KPAITWKRENHILASGSVQIPRFMLLESGGLQITPVFI 541

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRG 433
            D+G YTC A      + A A L V        N T I      + V+       +    
Sbjct: 542 QDAGNYTCYAANSEGSLNASAMLIVW-------NRTFIVRPPKDQVVIKGTMAMLRCGAT 594

Query: 434 HFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
           H     +     KD       +++    S+   V+K           L  +  ++G   +
Sbjct: 595 HDPRITLSYIWRKD------NMVITPSSSSRIVVEK--------DGSLLISQTWSGDIGD 640

Query: 494 IISFVTPEG-------------VPGTVQSLEAIPLGSSA--FYLKWVKPEQPNGVLMGYK 538
               +  EG             +P + Q+L A P  S +    L WV+P   N  ++ Y 
Sbjct: 641 YTCNIISEGGNDSRTARLEVIELPHSPQNLLASPNSSHSNTVMLSWVRPFDGNSPILYYI 700

Query: 539 IKYQ------SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG- 591
           ++         V  + VGP +           T   ++GL P+  Y+  +    + G G 
Sbjct: 701 VELSENNSPWKVHLSNVGPEM-----------TGITVSGLTPARTYQFRVCAVNQVGKGQ 749

Query: 592 --AESKYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
              E+  L      P   P N+   G T  ++++ W   PE EHN     Y + +R    
Sbjct: 750 YSTETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGL 809

Query: 647 GEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
              + Q ++     +  ++ +   +  YEI+V
Sbjct: 810 PGEYQQRNITSPEVNYCLVTDLIIWTQYEIQV 841



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 99/238 (41%), Gaps = 19/238 (7%)

Query: 389  FIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
            F  A    T+Q VP   P N  + + +++      W P   Q + G  +GYK+  W    
Sbjct: 852  FSRAVTEYTLQGVPTAPPQNVQM-EAVNSTTIQFLWTPPPQQFINGINQGYKLLAWPVDV 910

Query: 448  GEG----SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGV 503
             E     +I          + T + KF   +  F  VL F    +GPPS      T E  
Sbjct: 911  PEAITVVTIAPDFHGIHHGSITNLKKF---TAYFTSVLCFTTPGDGPPSTPQLVWTHEDK 967

Query: 504  PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
            PG V  L    +  ++  + W +P + NG++ GY+I ++       G    RL +  + T
Sbjct: 968  PGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQISWEV-----YGKNDSRLTHTLNST 1022

Query: 564  TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVIS 621
            T   K+ GL   T Y I +A  T  G G  +     +    P ++ G    P+NLVIS
Sbjct: 1023 TLEYKIRGLSSLTTYTIEVAAVTSVGSGLVTSST--ISSGVPPDLPG---APSNLVIS 1075



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 2/142 (1%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP N   +  + A +  V+W+P  P+S  G+ +GYK+  W E D +    ++ V   
Sbjct: 1697 PAMAPQNVQ-VNPLSASQLEVTWDPPPPESQNGNIQGYKIYYW-EADNQNETEKMKVLFL 1754

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
                  +      +K    + AFN A +GP S+     T +  PG    L    + S+  
Sbjct: 1755 PEPMVRLKNLTSHTKYLVSISAFNAAGDGPKSDPRQGRTHQAAPGAPSFLAFSEITSTTL 1814

Query: 521  YLKWVKPEQPNGVLMGYKIKYQ 542
             + W +P   NGVL GY++ Y+
Sbjct: 1815 NVSWGEPAAANGVLQGYRVVYE 1836



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 101/275 (36%), Gaps = 29/275 (10%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           APYF  EP       E   +   C A G    E  W+HN   ++             +  
Sbjct: 99  APYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMHNDSELTT-------YSSEYKYI 151

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR-V 242
           I +L+K D G Y C   N +G + +      +A+     +  + +    G   VL    +
Sbjct: 152 IPSLQKLDAGFYRCVVRNRMGALLQRKSEVQVAYMGNFMDIDQRKMISQGHAAVLNLMPI 211

Query: 243 FGAPKPEVNWIH-NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNK--------- 292
              P+P+V W     K +   R  I     L I     +D+G Y   A N+         
Sbjct: 212 TSCPRPQVTWFREGHKIIPSNRIAITLENQLVILATTASDAGAYYVQAVNEKNGENKTSP 271

Query: 293 ---LGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSE 348
              L  A+  G+      T I   P +  V AG S  T  C A + P  +LS+ W R   
Sbjct: 272 FIYLSIARDIGAPETTAPT-IVVPPGNRSVVAGSSEITLECIASARPVEELSVSWKRNGV 330

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            I        + S    LT++  +  D+G Y C A
Sbjct: 331 RIT-----SGLHSFGRRLTISNPTSADTGAYVCEA 360



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 12/208 (5%)

Query: 397  TVQVPLE-APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIR 453
            T+Q P + AP++ T ++        + W P+      G+    GY+++ W       ++ 
Sbjct: 1164 TLQAPPDVAPTSIT-VRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWCPDLPASALA 1222

Query: 454  ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEA 512
            ++I ++ E   T +++    ++   ++ AFN A +GP S ++   T E VP    +++ A
Sbjct: 1223 QVINDRLEREFT-IEELEEWTEYELQMQAFNAAGSGPWSNVLRGRTRESVPSAAPENVSA 1281

Query: 513  IPLGSSAFYLKWVK-PEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
              + S+   L W   PEQ  NG+++GYKI +++ K     P   R   +    T SA LA
Sbjct: 1282 EAVSSTQILLTWASVPEQDQNGLILGYKILFRA-KDLDPEP---RSHIVRGNHTQSALLA 1337

Query: 571  GLEPSTKYRIHLAGYTKAGDGAESKYLF 598
            GL     Y + +  +T+ G+G  S  L 
Sbjct: 1338 GLRKFVLYELQVLAFTRIGNGVPSLPLI 1365



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 3/144 (2%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V  Q   G   GYK+  +  KD +   R  IV  
Sbjct: 1271 VPSAAPENVS-AEAVSSTQILLTWASVPEQDQNGLILGYKI-LFRAKDLDPEPRSHIVRG 1328

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGTVQSLEAIPLGSS 518
              + +  +           +VLAF    NG PS  +I   T +  PG    L    +  +
Sbjct: 1329 NHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSLPLILERTKDDAPGPPVRLVFPEVRLT 1388

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQ 542
            +  + W  PE+PNG+++GY+I Y+
Sbjct: 1389 SVRIVWQPPEEPNGIILGYQIAYR 1412



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 95/229 (41%), Gaps = 30/229 (13%)

Query: 391  EAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV--QTWTEKD 447
            E +A  T+Q VP E P + +      +   ++ W P   +SL G  +GY++  +    + 
Sbjct: 1563 ETEAVTTLQDVPGEPPGSVSATPHTTSS-VLIQWQPPRDESLNGLLQGYRIYYRELEYEA 1621

Query: 448  GEGSIRELIVN----KGESTTTEVDKFVPAS-----------KNFARVLAFNGAYN---- 488
            G G   +++ +    + E T     K V +S           K + R      AYN    
Sbjct: 1622 GSGPEAKMLKSPSALRAELTAQSSFKMVNSSSTLTTYELTHLKKYRRYEVLMTAYNIIGE 1681

Query: 489  GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
             P S  +     E  P    Q+++  PL +S   + W    PE  NG + GYKI Y    
Sbjct: 1682 SPASAPVEVFVGEAAPAMAPQNVQVNPLSASQLEVTWDPPPPESQNGNIQGYKIYYWEAD 1741

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
                   ++ L ++ +P     +L  L   TKY + ++ +  AGDG +S
Sbjct: 1742 NQNETEKMKVL-FLPEPM---VRLKNLTSHTKYLVSISAFNAAGDGPKS 1786



 Score = 45.8 bits (107), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 64/166 (38%), Gaps = 8/166 (4%)

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
           TE    +  ++G  +VLTC   G+   E  W+HN  ELT    T        I  +   D
Sbjct: 104 TEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMHNDSELT----TYSSEYKYIIPSLQKLD 159

Query: 282 SGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           +G Y C  RN++G   Q    + V    +  D  +   +  G +A      ++    +  
Sbjct: 160 AGFYRCVVRNRMGALLQRKSEVQVAYMGNFMDIDQRKMISQGHAAVLNLMPITS-CPRPQ 218

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + W R    I   +       N   +  T +S  D+G Y  +A  E
Sbjct: 219 VTWFREGHKIIPSNRIAITLENQLVILATTAS--DAGAYYVQAVNE 262


>gi|338711348|ref|XP_001916955.2| PREDICTED: protein sidekick-2 [Equus caballus]
          Length = 2162

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 178/605 (29%), Positives = 258/605 (42%), Gaps = 32/605 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V     +V L C+    PL +   IW KDG+ +  S  IS  +Y + L I +   S
Sbjct: 212 KNTSVVAGTSEVTLECVANARPLIRLHIIWRKDGLLL--SGGIS--DYNRRLTIPNPTGS 267

Query: 98  DQGSYTCEVSNGVGEAKSY--SIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPE 154
           D G Y CE         S      LSVL  P F  EPE  I A  E+ V   C+A G+P 
Sbjct: 268 DSGYYECEAVLRSSSVPSVIRGAYLSVLEPPQFVKEPERHITAEMEKVVDIPCRAKGVPP 327

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
           P I W  +   +     +  R+     + I  L   DTG + C A N+ G      Y+ V
Sbjct: 328 PSITWYKDAAAVEVERLSRFRQRADGGLQISALVPDDTGMFQCFARNAAGEAQTSTYLAV 387

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILET 269
            + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T+LE+
Sbjct: 388 TSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLES 447

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+  C
Sbjct: 448 GSLLISPTHISDAGTYTCLATNSRGVDEASADLIVWARTRITKSPQDQSVIKGTQASMVC 507

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
               DP + +  VW +    +  ES PR     + SL ++++   D G YTCR  +    
Sbjct: 508 GVTHDPRVTVRYVWEKDGAALGMESNPRIRLDKNGSLHISQTWSGDIGTYTCRVLSAGGN 567

Query: 390 IEAQATLTVQVPLEAPSNFTLIQVIDAKKAV-VSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
               A L V+    AP +         ++A+ ++W    P         Y ++  +E + 
Sbjct: 568 DSRSAHLRVRQLPHAPEHPVATLSTTERRAINLTW--AKPFDGNSPLIRYVLEM-SENNA 624

Query: 449 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ 508
             ++    V+  E+T+  V   VPA     R+ A N    G  S+    V+    P T  
Sbjct: 625 PWTVLLASVDP-EATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAP 683

Query: 509 SLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT 564
               I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I+D   
Sbjct: 684 PQNVIASGRTNQSIMIQWQPPPESHQNGLLKGYVIRY-CLAGLPVG---YQFKNITDADV 739

Query: 565 TSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLV 619
            +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    +    + 
Sbjct: 740 NNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIR 799

Query: 620 ISWTA 624
            +W A
Sbjct: 800 FTWNA 804



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 179/680 (26%), Positives = 267/680 (39%), Gaps = 67/680 (9%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K Q V+  +   +R  ++  F      P PQ  W ++G  I PS RI+      +L+I  
Sbjct: 110 KHQSVSHGEAAVIRAPRIASF------PRPQVTWFREGRKIPPSSRIAI-TLENTLVILS 162

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFINAAEEET------- 142
               D G Y  + V++  G+ K S  I L+V  +  P   + P  I   +  +       
Sbjct: 163 TVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSE 222

Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
           VT EC A+  P   +H  W  +G  +S    +  R     R+TI N   SD+G Y C A 
Sbjct: 223 VTLECVANARPLIRLHIIWRKDGLLLSGGISDYNR-----RLTIPNPTGSDSGYYECEAV 277

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+  V +  Y++VL   P+  + P+   T + + VV + CR  G P P + W  + 
Sbjct: 278 LRSSSVPSVIRGAYLSVL-EPPQFVKEPERHITAEMEKVVDIPCRAKGVPPPSITWYKDA 336

Query: 257 KELTGGRYTILET---GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHITD 312
             +   R +       G L+I+ +   D+G + CFARN  G AQ S  L V     +IT 
Sbjct: 337 AAVEVERLSRFRQRADGGLQISALVPDDTGMFQCFARNAAGEAQTSTYLAVTSIAPNITR 396

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTK 370
            P D  V  G S    C     P  + +I W +G   +   S   PRF      SL ++ 
Sbjct: 397 GPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTLLESGSLLISP 454

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQS 430
           +   D+G YTC A       EA A L V          T I      ++V+     S   
Sbjct: 455 THISDAGTYTCLATNSRGVDEASADLIVWA-------RTRITKSPQDQSVIKGTQASMVC 507

Query: 431 LRGHFRGYKVQTWTEKDGEGSIRE----LIVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
              H     V+   EKDG     E    + ++K  S                RVL+  G 
Sbjct: 508 GVTHDPRVTVRYVWEKDGAALGMESNPRIRLDKNGSLHISQTWSGDIGTYTCRVLSAGGN 567

Query: 487 YNGPPSEIISFV--TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
            +      +  +   PE    T+ + E       A  L W KP   N  L+ Y ++  S 
Sbjct: 568 DSRSAHLRVRQLPHAPEHPVATLSTTE-----RRAINLTWAKPFDGNSPLIRYVLE-MSE 621

Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
                  LL  +    DP  TS  + GL P+  Y+  L      G G  SK    V    
Sbjct: 622 NNAPWTVLLASV----DPEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPE 677

Query: 601 --PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDW 658
             P   P NV   G T  +++I W   PE   N     Y I +        +   ++ D 
Sbjct: 678 EPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGLLKGYVIRYCLAGLPVGYQFKNITDA 737

Query: 659 RQSELVLANQPTFQPYEIKV 678
             + L+L +   +  YEI+V
Sbjct: 738 DVNNLLLEDLIIWTNYEIEV 757



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 75/177 (42%), Gaps = 11/177 (6%)

Query: 422 SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFA--- 478
           +WN  SPQ + G  +GYK+  W E + E  +  +        T  V  FV   K F    
Sbjct: 801 TWNAPSPQFINGINQGYKLIAW-EPEQEEEVTMVTARPNFQDTVHVG-FVSGLKKFTDYF 858

Query: 479 -RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
             VL F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY
Sbjct: 859 TSVLCFTTPGDGPRSTPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILSGY 918

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           +I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 919 RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTAKGQGQVS 970



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 105/274 (38%), Gaps = 27/274 (9%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           APYF  EP       E   +   C A G    E  W+HN + +++            R  
Sbjct: 15  APYFKTEPVRTQVHLEGNRLVLTCMAEGSWPLEFKWLHNSRELTKFSLE-------YRYM 67

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RV 242
           I +L ++  G Y C   N +G + +      +A+     E  K +    G+  V+   R+
Sbjct: 68  ITSLDRTHAGFYRCIVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAAVIRAPRI 127

Query: 243 FGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSG 300
              P+P+V W    +++    R  I     L I      D+G Y   A N K G  + S 
Sbjct: 128 ASFPRPQVTWFREGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQ 187

Query: 301 SLTVK----------EHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEP 349
            +T+               I   P++  V AG S  T  C A + P ++L I+W +    
Sbjct: 188 PITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTLECVANARPLIRLHIIWRKDGLL 247

Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +        +   +  LT+   +  DSG Y C A
Sbjct: 248 LSGG-----ISDYNRRLTIPNPTGSDSGYYECEA 276



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 127/307 (41%), Gaps = 43/307 (14%)

Query: 414  IDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDK 469
            + A+  ++SW P    +SP       R Y VQT     G  ++    V+   ST   VD+
Sbjct: 1403 VKARSVLLSWEPGSDGLSP------VRYYTVQTRELPSGRWALHSASVSHNASTFV-VDR 1455

Query: 470  FVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPGTVQSLEAI-PLGSSAFYLKWVKP 527
              P +    RV A N   +   SE      T +  P    ++ ++ P  +++  ++W  P
Sbjct: 1456 LKPFTSYKFRVKATNDIGDSEFSEESEPLTTLQAAPDEAPTIISVTPHTTTSVLIRWQPP 1515

Query: 528  --EQPNGVLMGYKIKYQSV---------------KGTKVGPL--LERLPYISDPTTTSAK 568
              ++ NG+L+G++I+Y+ +                G K   L  +  +  +S P+ T  +
Sbjct: 1516 PEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELTSMYSMRNLSRPSLTHYE 1575

Query: 569  LAGLEPSTKYRIHLAGYTKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWT 623
            L  L    +Y I ++ Y   G+G  S  + +F    VP   P NV   G+T   L ++W 
Sbjct: 1576 LDNLNKHRRYEIRMSVYNAVGEGPLSPPQEVFVGEAVPTAAPRNVAVHGATATQLDVTWE 1635

Query: 624  AMPEIEHNAPHFKYRI-FW--RRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQ 680
              P    N     Y+I FW  +R N  E   +   L   +S + L N   +  Y + V  
Sbjct: 1636 PPPLESQNGDIQGYKIYFWEAQRQNVTE---RVKTLFLAESGVKLKNLTGYTAYMVSVAA 1692

Query: 681  TWTEKDG 687
                 DG
Sbjct: 1693 FNAAGDG 1699



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V WN +      G   GYKV  + EKD +   R  +V  
Sbjct: 1188 VPSSGPTNVSALATTSSS-MLVRWNEIPEADRNGLVLGYKVM-YKEKDSDSQPRFWLVEG 1245

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1246 NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 1305

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P + Y
Sbjct: 1306 SVRLIWQPPAAPNGIILAYQITHRLNATTANAATVEVL----APSARQYTATGLKPESVY 1361

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1362 LFRITAQTRKGWGEAAEAL 1380



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N   +    A +  V+W P   +S  G  +GYK+  W  +    + R   +  
Sbjct: 1612 VPTAAPRNVA-VHGATATQLDVTWEPPPLESQNGDIQGYKIYFWEAQRQNVTERVKTLFL 1670

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             ES   ++      +     V AFN A +GP S      T +  P    S++   L +++
Sbjct: 1671 AESGV-KLKNLTGYTAYMVSVAAFNAAGDGPRSTPTRAQTQQAAPSAPSSVKFSELTTTS 1729

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P  PNGVL GY++ Y+
Sbjct: 1730 VNVSWEAPRFPNGVLEGYRLVYE 1752



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 125/308 (40%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 948  LTALTTYTIEVAAMTAKGQGQV----SASTISSGVPPELPGAPTNLGISN---------- 993

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKD-----GEGSIRELI---VNKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +      GEG    LI    N+ ++ + EV    P
Sbjct: 994  IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLTNEPDARSLEVPDLNP 1053

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 1054 FTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTA---SETSLWLRWMPL 1110

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY    G   G  L  +  + D       +  LE  T+YR+ + 
Sbjct: 1111 PEMEYNGNPESVGYKIKYSRADGH--GKTLSHV--VQDRVEREYTIEDLEEWTEYRVQVQ 1166

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S  +       VP   P NV    +T +++++ W  +PE + N     Y+
Sbjct: 1167 AFNAIGSGPWSHTVMGRTRESVPSSGPTNVSALATTSSSMLVRWNEIPEADRNGLVLGYK 1226

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1227 VMYKEKDS 1234


>gi|334333316|ref|XP_001367462.2| PREDICTED: protein sidekick-1 [Monodelphis domestica]
          Length = 2134

 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 184/619 (29%), Positives = 270/619 (43%), Gaps = 48/619 (7%)

Query: 50  KVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFSDQGSYTCE 105
           +V L CI    P+ +    W ++GV      +I+ G  N G+ L I +   SD G Y CE
Sbjct: 227 EVTLECIANARPIEELSMTWKRNGV------KITNGLHNLGRRLTITNPTSSDIGMYICE 280

Query: 106 VS-NGVG-EAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPEPEIHWVHN 162
               G   E       LS++  PYFT EPE  I A  E+TV   C+A G+P P + W  +
Sbjct: 281 AELKGTNFEPARTKAFLSIIEPPYFTAEPENRILAQVEKTVDITCQAMGVPVPNLEWYKD 340

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
             PIS+   +  + +    + I+ L   D+G + C A N  G +    Y++V   AP  T
Sbjct: 341 SVPISKLRNSRYKVLVSGGLRIQKLHPDDSGIFQCFARNEGGEIETHTYLDVTNIAPTFT 400

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDV 277
             P D    DG T +LTC V GAPKP + W   ++ L  G     R+ +LE+G L+IT V
Sbjct: 401 LRPVDTTVTDGMTAMLTCEVSGAPKPAITWRRGKQILASGSVQIPRFILLESGGLQITPV 460

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
              D+G YTC+A N  G+      LTV   T I   PED  V  G +AT  C A+ DP +
Sbjct: 461 FLQDAGNYTCYAVNSEGSLNAFAMLTVWNRTFIVFPPEDRTVIKGTTATLHCGAIHDPRI 520

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
            +  VW + +  I+  +  R V   D SL ++++   D G YTC   +E       A L 
Sbjct: 521 PIRYVWKKDNIVINPATSSRIVVEKDGSLLISQTWSGDIGDYTCEVISEGGNDSRMARLE 580

Query: 398 VQVPLEAPSNFTL-IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
           V     +P N    +    ++  ++SW  V P         Y V+  +E +    +    
Sbjct: 581 VIELPHSPQNLLASLNSSHSRTVMLSW--VRPFDGNSPVLYYIVEL-SENNSPWKVHLSN 637

Query: 457 VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGT-VQSLEAIP 514
           V+  E T+  V    PA     RV A N    G  S E    + PE  P    +++ A  
Sbjct: 638 VDP-EMTSVTVSGLTPARTYQFRVCAVNQVGKGQHSAETSRLMLPEEPPSAPPKNIVASG 696

Query: 515 LGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLP------YISDPTTTS 566
             + +  ++W  P +   NGVL GY ++Y+          L  LP       I+ P    
Sbjct: 697 RTNQSIMVQWQPPPETEHNGVLHGYILRYR----------LAGLPGEYQHRNITSPEINY 746

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEGRGSTPNNLVIS 621
             +  L   T+Y I +A Y  AG G  S+      L  VP   P NV+        +   
Sbjct: 747 CLVKDLIIWTQYEIQVAAYNGAGLGTFSRAVTEYTLQGVPTAPPQNVQTEALNSTTIQFL 806

Query: 622 WTAMPEIEHNAPHFKYRIF 640
           W   P+   N  +  Y++ 
Sbjct: 807 WNPPPQQFINGINQGYKLL 825



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 167/662 (25%), Positives = 257/662 (38%), Gaps = 79/662 (11%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSI-- 118
           P PQ  W +DG  I PS RI+     + +I+        G Y   V+   GE K+     
Sbjct: 136 PRPQVTWFRDGHKIIPSSRIAITLENQLVILATTAGDTGGYYVQAVNEKNGENKTSPFTY 195

Query: 119 -------DLSVLAAPYFTVEPEFIN-AAEEETVTFECKASGLP--EPEIHWVHNGKPISQ 168
                  D   + AP   + P   +  A    VT EC A+  P  E  + W  NG  I+ 
Sbjct: 196 LSIESESDTPDIMAPVIVIPPGNTSVVAGTSEVTLECIANARPIEELSMTWKRNGVKITN 255

Query: 169 APPNPRRKVGPNRITIENLRKSDTGNYGCNAT---NSLGYVYKDVYVNVLAHAPEITEAP 225
              N  R     R+TI N   SD G Y C A     +        +++++   P  T  P
Sbjct: 256 GLHNLGR-----RLTITNPTSSDIGMYICEAELKGTNFEPARTKAFLSII-EPPYFTAEP 309

Query: 226 KDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITDVAFAD 281
           ++       KTV +TC+  G P P + W  +     +L   RY +L +G L+I  +   D
Sbjct: 310 ENRILAQVEKTVDITCQAMGVPVPNLEWYKDSVPISKLRNSRYKVLVSGGLRIQKLHPDD 369

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           SG + CFARN+ G  +    L V       T +P D  V  G +A   C     P  K +
Sbjct: 370 SGIFQCFARNEGGEIETHTYLDVTNIAPTFTLRPVDTTVTDGMTAMLTCEVSGAP--KPA 427

Query: 341 IVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W RG + +   S   PRF+      L +T     D+G YTC A      + A A LTV
Sbjct: 428 ITWRRGKQILASGSVQIPRFILLESGGLQITPVFLQDAGNYTCYAVNSEGSLNAFAMLTV 487

Query: 399 QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVN 458
                   N T I      + V+     +      H     ++   +KD       +++N
Sbjct: 488 W-------NRTFIVFPPEDRTVIKGTTATLHCGAIHDPRIPIRYVWKKDN------IVIN 534

Query: 459 KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG-------------VPG 505
              S+   V+K           L  +  ++G   +    V  EG             +P 
Sbjct: 535 PATSSRIVVEK--------DGSLLISQTWSGDIGDYTCEVISEGGNDSRMARLEVIELPH 586

Query: 506 TVQSLEAIPLGSS---AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
           + Q+L A  L SS      L WV+P   N  ++ Y ++          P    L  + DP
Sbjct: 587 SPQNLLA-SLNSSHSRTVMLSWVRPFDGNSPVLYYIVELSE----NNSPWKVHLSNV-DP 640

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDG---AESKYLFY---VPFKNPDNVEGRGSTPN 616
             TS  ++GL P+  Y+  +    + G G   AE+  L      P   P N+   G T  
Sbjct: 641 EMTSVTVSGLTPARTYQFRVCAVNQVGKGQHSAETSRLMLPEEPPSAPPKNIVASGRTNQ 700

Query: 617 NLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEI 676
           ++++ W   PE EHN     Y + +R       +   ++     +  ++ +   +  YEI
Sbjct: 701 SIMVQWQPPPETEHNGVLHGYILRYRLAGLPGEYQHRNITSPEINYCLVKDLIIWTQYEI 760

Query: 677 KV 678
           +V
Sbjct: 761 QV 762



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 142/605 (23%), Positives = 214/605 (35%), Gaps = 60/605 (9%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSN 108
           L C   G P P   W + G  I  S  +    +       L I  V   D G+YTC   N
Sbjct: 416 LTCEVSGAPKPAITWRR-GKQILASGSVQIPRFILLESGGLQITPVFLQDAGNYTCYAVN 474

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQ 168
             G   ++++ L+V    +    PE     +  T T  C A   P   I +V     I  
Sbjct: 475 SEGSLNAFAM-LTVWNRTFIVFPPEDRTVIKGTTATLHCGAIHDPRIPIRYVWKKDNIVI 533

Query: 169 APPNPRRKV--GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAPEITEA 224
            P    R V      + I      D G+Y C   +  G   +   + V  L H+P+   A
Sbjct: 534 NPATSSRIVVEKDGSLLISQTWSGDIGDYTCEVISEGGNDSRMARLEVIELPHSPQNLLA 593

Query: 225 PKDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAF---- 279
             +  +   +TV+L+  R F    P + +I    E        L   D ++T V      
Sbjct: 594 SLN--SSHSRTVMLSWVRPFDGNSPVLYYIVELSENNSPWKVHLSNVDPEMTSVTVSGLT 651

Query: 280 -ADSGEYTCFARNKLGTAQGSGS---LTVKEHTHITDQPEDYEVEAGQS----------- 324
            A + ++   A N++G  Q S     L + E       P    V +G++           
Sbjct: 652 PARTYQFRVCAVNQVGKGQHSAETSRLMLPEEP--PSAPPKNIVASGRTNQSIMVQWQPP 709

Query: 325 -ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
             T     +    L+  +  L G       + P         L +    E+    Y    
Sbjct: 710 PETEHNGVLHGYILRYRLAGLPGEYQHRNITSPEINYCLVKDLIIWTQYEIQVAAYNGAG 769

Query: 384 QTELDFIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT 442
                F  A    T+Q VP   P N    + +++      WNP   Q + G  +GYK+  
Sbjct: 770 LG--TFSRAVTEYTLQGVPTAPPQNVQ-TEALNSTTIQFLWNPPPQQFINGINQGYKLLA 826

Query: 443 WTEKDGEGSIRELIVNKGEST----TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
           W     E  I   I            T + KF   +  +  VL F    +GP S      
Sbjct: 827 WPVDVPEALITVTIAPDFHGIHHGFITNLKKF---TAYYTSVLCFTTPGDGPRSPPHLIW 883

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
           T E  PG V  L    +  ++  + W +P + NG+++GY+I ++            RL  
Sbjct: 884 THEDKPGAVGHLSFTEILDTSLKVSWQEPVEKNGIIIGYQISWEVYSRND-----SRLTL 938

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG--AESKYLFYVPFKNPDNVEGRGSTPN 616
             + TT   K+ GL   T Y I +A  T  G G    S     VP + P         P+
Sbjct: 939 TLNNTTHEYKIKGLSSLTTYTIEVAAVTATGIGLVTSSTISSGVPPELP-------GAPS 991

Query: 617 NLVIS 621
           NLVIS
Sbjct: 992 NLVIS 996



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 152/383 (39%), Gaps = 48/383 (12%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           ++ L   ++ L C+  G+      W  +   I   + I+        II  +E +D G Y
Sbjct: 31  QIHLEGNRLVLTCLAEGS------WPLEFKWICNDNEITTYTSEYKYIIPSLERTDAGFY 84

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGL--------PE 154
            C V N +G       ++ V           FI+A + +TV F+  A+ L        P 
Sbjct: 85  RCVVRNRMGALLQRKSEVQV------AYMGNFIDADQRKTV-FQGGAAVLNLPHIISYPR 137

Query: 155 PEIHWVHNGKPISQAPPNPRRKVG-PNRITIENLRKSDTGNYGCNATNSLGYVYKD---V 210
           P++ W  +G  I    P+ R  +   N++ I      DTG Y   A N      K     
Sbjct: 138 PQVTWFRDGHKII---PSSRIAITLENQLVILATTAGDTGGYYVQAVNEKNGENKTSPFT 194

Query: 211 YVNVLAH-------APEITEAPKDEYTVDGKT-VVLTCRVFGAPKPEVN--WIHNQKELT 260
           Y+++ +        AP I   P +   V G + V L C     P  E++  W  N  ++T
Sbjct: 195 YLSIESESDTPDIMAPVIVIPPGNTSVVAGTSEVTLECIANARPIEELSMTWKRNGVKIT 254

Query: 261 GGRYTILETGDLKITDVAFADSGEYTCFARNKLGT----AQGSGSLTVKEHTHITDQPED 316
            G + +     L IT+   +D G Y C A  K GT    A+    L++ E  + T +PE+
Sbjct: 255 NGLHNLGR--RLTITNPTSSDIGMYICEAELK-GTNFEPARTKAFLSIIEPPYFTAEPEN 311

Query: 317 YEV-EAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
             + +  ++    C A+  P   L   W + S PI      R+       L + K    D
Sbjct: 312 RILAQVEKTVDITCQAMGVPVPNLE--WYKDSVPISKLRNSRYKVLVSGGLRIQKLHPDD 369

Query: 376 SGQYTCRAQTELDFIEAQATLTV 398
           SG + C A+ E   IE    L V
Sbjct: 370 SGIFQCFARNEGGEIETHTYLDV 392



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 2/142 (1%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP N   +  + A +  V W+P   +S  G  +GYK+  W E D +     + V   
Sbjct: 1618 PAMAPQNIQ-VNPLTASQLEVIWDPPPVESQNGIIQGYKIYYW-EADSQNDTENMKVLFL 1675

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
              T   +      +K    + AFN A +GP SE     T +  PG    L    + S+  
Sbjct: 1676 PETMVRLKNLTSHTKYLVSISAFNAAGDGPKSEPRQGRTQQAAPGAPSFLAFSEITSTTL 1735

Query: 521  YLKWVKPEQPNGVLMGYKIKYQ 542
             + W +P   NGVL GY++ Y+
Sbjct: 1736 NISWGEPVAANGVLQGYRVVYE 1757



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 95/234 (40%), Gaps = 31/234 (13%)

Query: 388  DF-IEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV--QTW 443
            DF  E +A  T+Q VP E P N   +        +V W P   +SL G   GY++  +  
Sbjct: 1480 DFSAETEAVTTLQDVPGEPP-NCVSVTPHTTSSVLVQWQPPRDESLNGLLVGYRIYYREL 1538

Query: 444  TEKDGEGSIRELIVN----KGESTTTEVDKFVPAS-----------KNFARVLAFNGAYN 488
              + G G+  + + N    + E T     K V +S           K + R      AYN
Sbjct: 1539 EYETGPGTESKTVKNPSALRAELTPQSSFKTVNSSSALTTYELTHLKKYKRYEVIMTAYN 1598

Query: 489  ----GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKY 541
                 P S  +     E  P    Q+++  PL +S   + W  P  E  NG++ GYKI Y
Sbjct: 1599 IIGESPASAPVEVFVGEAAPAMAPQNIQVNPLTASQLEVIWDPPPVESQNGIIQGYKIYY 1658

Query: 542  QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK 595
                        E +  +  P T   +L  L   TKY + ++ +  AGDG +S+
Sbjct: 1659 WEADSQND---TENMKVLFLPETM-VRLKNLTSHTKYLVSISAFNAAGDGPKSE 1708



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 3/144 (2%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N + ++ + + + +++W  V  Q   G   GYK+  +  KD +   +  +V  
Sbjct: 1192 VPSAAPENVS-VEAVSSTQILITWASVPEQDQNGLILGYKI-LFKAKDLDSEPKTHVVRG 1249

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNG-PPSEIISFVTPEGVPGTVQSLEAIPLGSS 518
              + +  +           +VLAF    NG P S  I   T +  PG    L    +  +
Sbjct: 1250 NHTQSVLLAGLRKYVLYELQVLAFTRIGNGVPSSPPILERTKDDAPGPPVRLVFPEVRLT 1309

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQ 542
            +  + W  PE+PNG+++GY+I Y+
Sbjct: 1310 SVRIVWQPPEEPNGIILGYQIAYR 1333



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 16/206 (7%)

Query: 397  TVQVPLE-APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIR 453
            T+Q P + AP++ T ++        + W P+      G+    GY+++ W        + 
Sbjct: 1085 TLQAPPDIAPASVT-VRTASETSLWLRWVPLPDSQYNGNPESVGYRIKYWRTDLQSSVMV 1143

Query: 454  ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ---SL 510
            ++I ++ E   T +++    ++   ++ AFN    GP SE++   T E VP       S+
Sbjct: 1144 QVISDRLEREYT-IEELEEWTEYELQMQAFNAIGAGPWSEMVRGRTRESVPSAAPENVSV 1202

Query: 511  EAIPLGSSAFYLKWVK-PEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
            EA+   S+   + W   PEQ  NG+++GYKI +++ K     P   +   +    T S  
Sbjct: 1203 EAV--SSTQILITWASVPEQDQNGLILGYKILFKA-KDLDSEP---KTHVVRGNHTQSVL 1256

Query: 569  LAGLEPSTKYRIHLAGYTKAGDGAES 594
            LAGL     Y + +  +T+ G+G  S
Sbjct: 1257 LAGLRKYVLYELQVLAFTRIGNGVPS 1282



 Score = 42.7 bits (99), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 67/167 (40%), Gaps = 10/167 (5%)

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
           TE    +  ++G  +VLTC   G+   E  WI N  E+T    T        I  +   D
Sbjct: 25  TEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWICNDNEIT----TYTSEYKYIIPSLERTD 80

Query: 282 SGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC-NAVSDPSLKL 339
           +G Y C  RN++G   Q    + V    +  D  +   V  G +A     + +S P  + 
Sbjct: 81  AGFYRCVVRNRMGALLQRKSEVQVAYMGNFIDADQRKTVFQGGAAVLNLPHIISYP--RP 138

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
            + W R    I   S  R   + +  L +  ++  D+G Y  +A  E
Sbjct: 139 QVTWFRDGHKIIPSS--RIAITLENQLVILATTAGDTGGYYVQAVNE 183


>gi|449481128|ref|XP_002195594.2| PREDICTED: neuronal cell adhesion molecule [Taeniopygia guttata]
          Length = 1284

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 161/528 (30%), Positives = 240/528 (45%), Gaps = 48/528 (9%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           +V LR   + L CI  G P P   W K+G  + P++R    N+ K+L I  V  +D G+Y
Sbjct: 256 KVELRGNVLLLECIAAGLPTPVIRWIKEGGEL-PANRTFFENFKKTLKIIDVSEADSGNY 314

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C   N +G    + I ++V AAPY+   P  +  +  E  T  C+A+G P+P I W+ N
Sbjct: 315 KCIARNTLGSVH-HVISVTVKAAPYWITAPRNLVLSPGEDGTLICRANGNPKPSISWLAN 373

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI- 221
           G PI+ AP +P RKV  + I    +++  +  Y CNA+N  GY+  + +VNVLA  P I 
Sbjct: 374 GVPIAIAPEDPSRKVDGDTIIFSQVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRIL 433

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAF 279
           T A K    +     +L C  FG+PKPE+ W    K   L G  Y   + G L+I     
Sbjct: 434 TPANKLYQVIADSPALLDCAYFGSPKPEIEWFKGVKGSILRGNEYVFHDNGTLEIPVAQK 493

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
             +G YTC ARN+LG  Q    L +K+ T I  QPE   ++     +F C    D +L  
Sbjct: 494 NSAGTYTCVARNELGKIQNEVQLEIKDPTMIIKQPEYKVIQRYGQVSFECIIKHDSTLLP 553

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           ++ WL+ ++  +   + RF+   D +LT+   ++ D G YTC   T LD + A A LTV 
Sbjct: 554 TVTWLKNND--ELPDDERFLVGKD-NLTIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVV 610

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGS-IRELIVN 458
                P+      +I A+      NP     L G        +W   D   S I   ++ 
Sbjct: 611 AAPPTPA------IIYARP-----NPPFDLELTGQLERSIDLSWIPGDENNSPIINFVIE 659

Query: 459 -----------------KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IIS 496
                             G  TT ++ K  P      RV+A N      PSE     +  
Sbjct: 660 YEDALHEPGVWHYQTEVPGTQTTAQL-KLSPYVNYSFRVIAVNKIGRSQPSEPSEQYLTK 718

Query: 497 FVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQ 542
             +P+  P  VQ + + P       + W  +K  Q NG  + YK+ ++
Sbjct: 719 SASPDENPANVQGIGSEP---DNLVITWEPLKGFQSNGPGLQYKVSWR 763



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 170/670 (25%), Positives = 267/670 (39%), Gaps = 89/670 (13%)

Query: 59  GTPLPQTIWSKDGVPINP-SDRISQGNYGKSLIIKHVEFSD-QGSYTC------------ 104
           G P P   W  +     P S+R+SQG  G  L   +V+  D +  Y C            
Sbjct: 167 GLPPPIIFWMDNAFQRLPQSERVSQGLNG-DLYFSNVQPEDTREDYICYARFNHTQTIQQ 225

Query: 105 --EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
              +S  V   K  +    VL  P  +   +         +  EC A+GLP P I W+  
Sbjct: 226 KQPISVKVFSTKPVTERQPVLLTPTGSTSTKV--ELRGNVLLLECIAAGLPTPVIRWIKE 283

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRK---------SDTGNYGCNATNSLGYVYKDVYVN 213
           G  +             NR   EN +K         +D+GNY C A N+LG V+  + V 
Sbjct: 284 GGELPA-----------NRTFFENFKKTLKIIDVSEADSGNYKCIARNTLGSVHHVISVT 332

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD-- 271
           V A AP    AP++     G+   L CR  G PKP ++W+ N   +           D  
Sbjct: 333 VKA-APYWITAPRNLVLSPGEDGTLICRANGNPKPSISWLANGVPIAIAPEDPSRKVDGD 391

Query: 272 -LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED--YEVEAGQSATFR 328
            +  + V    S  Y C A N+ G    +  + V         P +  Y+V A   A   
Sbjct: 392 TIIFSQVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPANKLYQVIADSPALLD 451

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C     P  K  I W +G +         +V  ++ +L +  + +  +G YTC A+ EL 
Sbjct: 452 CAYFGSP--KPEIEWFKGVKGSILRGN-EYVFHDNGTLEIPVAQKNSAGTYTCVARNELG 508

Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGY-KVQTWTEKD 447
            I+ +  L ++ P       T+I      K +  +  VS + +  H        TW + +
Sbjct: 509 KIQNEVQLEIKDP-------TMIIKQPEYKVIQRYGQVSFECIIKHDSTLLPTVTWLKNN 561

Query: 448 GE---------GSIRELIVN---KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
            E         G     I+N   K + T T +      S + + VL    A   PP+  I
Sbjct: 562 DELPDDERFLVGKDNLTIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVVAA---PPTPAI 618

Query: 496 SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ-SVKGTKVGPLLE 554
            +  P         LE       +  L W+  ++ N  ++ + I+Y+ ++    V     
Sbjct: 619 IYARP----NPPFDLELTGQLERSIDLSWIPGDENNSPIINFVIEYEDALHEPGVWHYQT 674

Query: 555 RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES----KYLF--YVPFKNPDNV 608
            +P     T T+A+L  L P   Y   +    K G    S    +YL     P +NP NV
Sbjct: 675 EVPG----TQTTAQLK-LSPYVNYSFRVIAVNKIGRSQPSEPSEQYLTKSASPDENPANV 729

Query: 609 EGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQ 668
           +G GS P+NLVI+W  +   + N P  +Y++ WR+ +  + W    V+    S+ +++  
Sbjct: 730 QGIGSEPDNLVITWEPLKGFQSNGPGLQYKVSWRQKDVDDEWTS--VIVANVSKYIVSGT 787

Query: 669 PTFQPYEIKV 678
           PTF PYE+KV
Sbjct: 788 PTFVPYEVKV 797



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 143/590 (24%), Positives = 245/590 (41%), Gaps = 73/590 (12%)

Query: 53   LFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L C + G+P P+  W K   G  +  ++ +   N   +L I   + +  G+YTC   N +
Sbjct: 450  LDCAYFGSPKPEIEWFKGVKGSILRGNEYVFHDN--GTLEIPVAQKNSAGTYTCVARNEL 507

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC--KASGLPEPEIHWVHNGKPISQ 168
            G+ ++  + L +        +PE+        V+FEC  K      P + W+ N     +
Sbjct: 508  GKIQN-EVQLEIKDPTMIIKQPEYKVIQRYGQVSFECIIKHDSTLLPTVTWLKNN---DE 563

Query: 169  APPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAH--APEITEA-- 224
             P + R  VG + +TI N+   D G Y C    +L  V     + V+A    P I  A  
Sbjct: 564  LPDDERFLVGKDNLTIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVVAAPPTPAIIYARP 623

Query: 225  --PKD-EYTVDGKTVVLTCRVFGAPK--PEVNWI-------------HNQKELTGGRYTI 266
              P D E T   +  +    + G     P +N++             H Q E+ G +   
Sbjct: 624  NPPFDLELTGQLERSIDLSWIPGDENNSPIINFVIEYEDALHEPGVWHYQTEVPGTQ--- 680

Query: 267  LETGDLKITDVAFADSGEYTCFARNKLGTAQGS--------GSLTVKEH----THITDQP 314
              T  LK++      +  +   A NK+G +Q S         S +  E+      I  +P
Sbjct: 681  -TTAQLKLSPYV---NYSFRVIAVNKIGRSQPSEPSEQYLTKSASPDENPANVQGIGSEP 736

Query: 315  EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
            ++  +       F+ N    P L+  + W +     ++ S    + +N     V+ +   
Sbjct: 737  DNLVITWEPLKGFQSNG---PGLQYKVSWRQKDVDDEWTS---VIVANVSKYIVSGTPTF 790

Query: 375  DSGQYTCRAQTELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQS 430
               +   +A  +L +    + +       +P+ AP N   + VI++  A V W+PV  ++
Sbjct: 791  VPYEVKVQALNDLGYAPEPSEVIGHSGEDLPMVAPGNVQ-VHVINSTLAKVHWDPVPLKT 849

Query: 431  LRGHFRGYKVQTW-----TEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNG 485
            +RGH +GYKV  W     + +      ++++  +G  T   +    P S     V   NG
Sbjct: 850  VRGHLQGYKVYYWKVQSLSRRSRRHIEKKILTFRGNKTFGMLPGLEPYSSYKLNVRVVNG 909

Query: 486  AYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVK 545
               GP S    F TPEGVP +   L+       +  L+W  P  PNGVL  Y +K+Q + 
Sbjct: 910  KGEGPASPDKVFNTPEGVPSSPSFLKITNPTLDSLTLEWGSPTHPNGVLTSYTLKFQPIN 969

Query: 546  GT-KVGPLLE-RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
             T ++GPL+E ++P       +S  L  L  ST+Y+ +    T  G G++
Sbjct: 970  NTHELGPLVEIKIP----ANESSLILKNLNYSTRYKFYFNAQTSVGSGSQ 1015



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 146/616 (23%), Positives = 230/616 (37%), Gaps = 81/616 (13%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P   W  +GVPI     +PS ++     G ++I   V+      Y C  S
Sbjct: 356 LICRANGNPKPSISWLANGVPIAIAPEDPSRKVD----GDTIIFSQVQERSSAVYQCNAS 411

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P   + P  +      +     +C   G P+PEI W   G  
Sbjct: 412 NEYGYLLANAF-VNVLAEPPRILTPANKLYQVIADSPALLDCAYFGSPKPEIEWF-KGVK 469

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
            S    N         + I   +K+  G Y C A N LG +  +V + +      I + P
Sbjct: 470 GSILRGNEYVFHDNGTLEIPVAQKNSAGTYTCVARNELGKIQNEVQLEI-KDPTMIIKQP 528

Query: 226 KDEYTVDGKTVVLTCRVF--GAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSG 283
           + +       V   C +       P V W+ N  EL      ++   +L I +V   D G
Sbjct: 529 EYKVIQRYGQVSFECIIKHDSTLLPTVTWLKNNDELPDDERFLVGKDNLTIMNVTDKDDG 588

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVW 343
            YTC     L +   S  LTV     +   P    + A  +  F           + + W
Sbjct: 589 TYTCIVNTTLDSVSASAVLTV-----VAAPPTPAIIYARPNPPFDLELTGQLERSIDLSW 643

Query: 344 LRGSE---PI-----------------DFESEPRFVQSN---------DYSLTVTKSSEL 374
           + G E   PI                  +++E    Q+          +YS  V   +++
Sbjct: 644 IPGDENNSPIINFVIEYEDALHEPGVWHYQTEVPGTQTTAQLKLSPYVNYSFRVIAVNKI 703

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
              Q    ++    ++   A+     P E P+N   I   +    V++W P+      G 
Sbjct: 704 GRSQ---PSEPSEQYLTKSAS-----PDENPANVQGIGS-EPDNLVITWEPLKGFQSNGP 754

Query: 435 FRGYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNG-AYNGPPS 492
              YKV +W +KD +     +IV N  +   +    FVP      +V A N   Y   PS
Sbjct: 755 GLQYKV-SWRQKDVDDEWTSVIVANVSKYIVSGTPTFVPYE---VKVQALNDLGYAPEPS 810

Query: 493 EIISFV---TPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT 547
           E+I       P   PG VQ      + S+   + W  V  +   G L GYK+ Y  V+  
Sbjct: 811 EVIGHSGEDLPMVAPGNVQ---VHVINSTLAKVHWDPVPLKTVRGHLQGYKVYYWKVQSL 867

Query: 548 --KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
             +    +E+         T   L GLEP + Y++++      G+G  S      P K  
Sbjct: 868 SRRSRRHIEKKILTFRGNKTFGMLPGLEPYSSYKLNVRVVNGKGEGPAS------PDKVF 921

Query: 606 DNVEGRGSTPNNLVIS 621
           +  EG  S+P+ L I+
Sbjct: 922 NTPEGVPSSPSFLKIT 937



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 123/296 (41%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS---QAPPNPRRKVGPNRITIENLRKSDT--GNY 195
           E +  +C+A G P P   W  NG        A    +   G   + I N  K++   G Y
Sbjct: 57  ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDAQVTMKPNSGTLVVNIMNGGKAEAYEGIY 116

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEIT-EAPKDEYTVDGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +  V   + +P  T E  +  +  +G ++VL CR   G P P + W+
Sbjct: 117 QCTARNERGAAISNNIVIRPSRSPLWTKEKLEPNHVREGDSLVLHCRPPVGLPPPIIFWM 176

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVKEHTH 309
            N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK  + 
Sbjct: 177 DNAFQRLPQSERVSQGLNGDLYFSNVQPEDTREDYICYARFNHTQTIQQKQPISVKVFST 236

Query: 310 --ITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             +T++        G ++T            C A   P+    I W++  E  +  +   
Sbjct: 237 KPVTERQPVLLTPTGSTSTKVELRGNVLLLECIAAGLPT--PVIRWIK--EGGELPANRT 292

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
           F ++   +L +   SE DSG Y C A+  L  +    ++TV+     + AP N  L
Sbjct: 293 FFENFKKTLKIIDVSEADSGNYKCIARNTLGSVHHVISVTVKAAPYWITAPRNLVL 348



 Score = 40.0 bits (92), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 34/153 (22%), Positives = 58/153 (37%), Gaps = 11/153 (7%)

Query: 188 RKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAP 246
           RK+    + C   ++L        +  L+  P IT+    +Y VD +  +V+ C   G P
Sbjct: 10  RKASLVLFLCQIISALDVPLDSKLLEELSQPPTITQQSPKDYIVDPRENIVIQCEAKGKP 69

Query: 247 KPEVNWIHNQKEL---TGGRYTILETGDLKITDV-----AFADSGEYTCFARNKLGTAQG 298
            P  +W  N          + T+       + ++     A A  G Y C ARN+ G A  
Sbjct: 70  PPSFSWTRNGTHFDIDKDAQVTMKPNSGTLVVNIMNGGKAEAYEGIYQCTARNERGAAIS 129

Query: 299 SGSLTVKEHTHI--TDQPEDYEVEAGQSATFRC 329
           +  +     + +   ++ E   V  G S    C
Sbjct: 130 NNIVIRPSRSPLWTKEKLEPNHVREGDSLVLHC 162


>gi|395533097|ref|XP_003768600.1| PREDICTED: protein sidekick-2 [Sarcophilus harrisii]
          Length = 2153

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 181/607 (29%), Positives = 262/607 (43%), Gaps = 36/607 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V     +V + C+    PL +   IW KDGVP+  S  IS  N  + L I + + S
Sbjct: 204 KNTSVVAGTSEVTMECVANARPLIKLHIIWKKDGVPV--SGGISDHN--RRLTILNPKGS 259

Query: 98  DQGSYTCEV---SNGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLP 153
           + G Y CE    S+ V      ++ LSVL  P F  EPE  I A  E+ V   C+A G+P
Sbjct: 260 NTGYYECEAVLRSSSVPSVVRGAV-LSVLEPPQFIKEPERHITAEMEKVVDIPCQAKGVP 318

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
            P   W  +   I     +  R  G   + I  L   DTG + C A NS G V    Y+ 
Sbjct: 319 SPITTWYKDAAVIDVKKLSRFRLHGDGSLQISGLVPDDTGMFQCFARNSAGEVQTSTYLA 378

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T+LE
Sbjct: 379 VTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSIQLPRFTLLE 438

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A   
Sbjct: 439 SGSLLISPTRISDAGSYTCLATNSRGVDEASADLIVWARTRITMAPQDQSVIKGTKAFMT 498

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C    DPS+ +  +W +    I  +S PR     + SL ++++   D G YTCR  +   
Sbjct: 499 CGVTHDPSVSIRYIWEKDGAVISVDSIPRMRLDKNGSLHISQTWSGDIGTYTCRVLSAGG 558

Query: 389 FIEAQATLTVQVPLEAPSN-FTLIQVIDAKKAVVSW-NPVSPQSLRGHFRGYKVQTWTEK 446
                A L V+    AP +    +   + +   ++W  P    S   H+    V   +E 
Sbjct: 559 NDSKSAYLRVRQLPHAPEHPMATLSTAERRSINLTWAKPFDGNSPLIHY----VLEMSEN 614

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGT 506
           +   ++    V+  E+T+  V   VPA     R+ A N    G  S+    V+    P T
Sbjct: 615 NAPWTVLLPSVDP-EATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPT 673

Query: 507 VQSLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
                 I  G +  +  ++W  P +   NG+L GY I++  + G  VG    +   I++ 
Sbjct: 674 APPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRF-CLAGLPVG---YQFRNITNA 729

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNN 617
              +  L  L   T Y I +A Y  AG G  S       L  VP   P NV         
Sbjct: 730 DVNNLLLEELIIWTNYEISVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVRAEAINSTT 789

Query: 618 LVISWTA 624
           +  +W A
Sbjct: 790 IRFTWNA 796



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 169/653 (25%), Positives = 259/653 (39%), Gaps = 105/653 (16%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K Q V+  +   ++  ++  F      P PQ  W +DG  I PS RI+      +L+I  
Sbjct: 102 KHQSVSHGEAAVIKAPRISSF------PQPQVTWFRDGRKIPPSSRIAI-TLDNTLVILS 154

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFINAAEEET------- 142
               D G Y  + V++  G+ K S  I L+V  +  P   + P  I   +  +       
Sbjct: 155 TVAPDAGRYYVQAVNDKNGDNKTSQPITLTVENVGGPADPIAPTIIIPPKNTSVVAGTSE 214

Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
           VT EC A+  P  ++H  W  +G P+S    +  R     R+TI N + S+TG Y C A 
Sbjct: 215 VTMECVANARPLIKLHIIWKKDGVPVSGGISDHNR-----RLTILNPKGSNTGYYECEAV 269

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNW---- 252
             ++S+  V +   ++VL   P+  + P+   T + + VV + C+  G P P   W    
Sbjct: 270 LRSSSVPSVVRGAVLSVL-EPPQFIKEPERHITAEMEKVVDIPCQAKGVPSPITTWYKDA 328

Query: 253 -IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHI 310
            + + K+L+  R+ +   G L+I+ +   D+G + CFARN  G  Q S  L V     +I
Sbjct: 329 AVIDVKKLS--RFRLHGDGSLQISGLVPDDTGMFQCFARNSAGEVQTSTYLAVTSIAPNI 386

Query: 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFES--EPRFVQSNDYSLTV 368
           T  P D  V  G S    C     P  + +I W +G   +   S   PRF      SL +
Sbjct: 387 TRGPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSIQLPRFTLLESGSLLI 444

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQ------------- 412
           + +   D+G YTC A       EA A L V        AP + ++I+             
Sbjct: 445 SPTRISDAGSYTCLATNSRGVDEASADLIVWARTRITMAPQDQSVIKGTKAFMTCGVTHD 504

Query: 413 -------VIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTT 465
                  + +   AV+S + +    L  +   +  QTW+   G  + R L     +S + 
Sbjct: 505 PSVSIRYIWEKDGAVISVDSIPRMRLDKNGSLHISQTWSGDIGTYTCRVLSAGGNDSKSA 564

Query: 466 EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWV 525
                      + RV     A             PE    T+ + E       +  L W 
Sbjct: 565 -----------YLRVRQLPHA-------------PEHPMATLSTAE-----RRSINLTWA 595

Query: 526 KPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
           KP   N  L+ Y ++          P    LP + DP  TS  + GL P+  Y+  L   
Sbjct: 596 KPFDGNSPLIHYVLEMSE----NNAPWTVLLPSV-DPEATSVMVKGLVPARSYQFRLCAV 650

Query: 586 TKAGDGAESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNA 632
              G G  SK    V      P   P NV   G T  +++I W   PE   N 
Sbjct: 651 NDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNG 703



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 152/588 (25%), Positives = 229/588 (38%), Gaps = 70/588 (11%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEV 106
           V L C   G P P   W K G  I  S  I    +      SL+I     SD GSYTC  
Sbjct: 401 VVLACETSGAPRPAITWQK-GERILASGSIQLPRFTLLESGSLLISPTRISDAGSYTCLA 459

Query: 107 SN--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--WVHN 162
           +N  GV EA   S DL V A    T+ P+  +  +       C  +  P   I   W  +
Sbjct: 460 TNSRGVDEA---SADLIVWARTRITMAPQDQSVIKGTKAFMTCGVTHDPSVSIRYIWEKD 516

Query: 163 GKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAP 219
           G  IS     PR ++  N  + I      D G Y C   ++ G   K  Y+ V  L HAP
Sbjct: 517 GAVIS-VDSIPRMRLDKNGSLHISQTWSGDIGTYTCRVLSAGGNDSKSAYLRVRQLPHAP 575

Query: 220 EITEAPKDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVA 278
           E   A     T + +++ LT  + F    P ++++    E       +L + D + T V 
Sbjct: 576 EHPMATLS--TAERRSINLTWAKPFDGNSPLIHYVLEMSENNAPWTVLLPSVDPEATSVM 633

Query: 279 F-----ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS--ATFRCN- 330
                 A S ++   A N +G  Q S      + T     PE+      Q+  A+ R N 
Sbjct: 634 VKGLVPARSYQFRLCAVNDVGKGQFS------KDTERVSLPEEPPTAPPQNVIASGRTNQ 687

Query: 331 -----------AVSDPSLKLSIV-WLRGSEPIDFESEPRFVQSNDYS------LTVTKSS 372
                      +  +  LK  I+ +     P+ ++   R + + D +      L +  + 
Sbjct: 688 SIMIQWQPPPESHQNGILKGYIIRFCLAGLPVGYQF--RNITNADVNNLLLEELIIWTNY 745

Query: 373 ELDSGQYTCRAQTELDFIEAQAT-LTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQS 430
           E+    Y       L    ++ T  T+Q VP   P N    + I++     +WN  SPQ 
Sbjct: 746 EISVAAYNSAG---LGVYSSKVTEWTLQGVPTVPPGNVR-AEAINSTTIRFTWNAPSPQF 801

Query: 431 LRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN----FARVLAFNGA 486
           + G  +GYK+  W E + E  +  +        +  V  FV   K     F  VL F   
Sbjct: 802 INGINQGYKLIAW-EPEQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTDYFTSVLCFTTP 859

Query: 487 YNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKG 546
            +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY+I ++    
Sbjct: 860 GDGPRSSPQLVRTHEDVPGPVGHLSFNEILDTSLKVSWQEPGERNGILTGYRISWEEYNR 919

Query: 547 TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 920 TNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 962



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 109/274 (39%), Gaps = 27/274 (9%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           +PYF  EP       E   +   C A G    E  W+HN + +++            R  
Sbjct: 7   SPYFKTEPVRTQVHLEGNRLVLTCMAEGSWPLEFKWLHNNRELTKFSLE-------YRYM 59

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RV 242
           I +L ++  G Y C   N +G + +      +A+     E  K +    G+  V+   R+
Sbjct: 60  ITSLDRTHAGFYRCIVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAAVIKAPRI 119

Query: 243 FGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSG 300
              P+P+V W  + +++    R  I     L I      D+G Y   A N K G  + S 
Sbjct: 120 SSFPQPQVTWFRDGRKIPPSSRIAITLDNTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQ 179

Query: 301 --SLTVKEHTHITD--------QPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEP 349
             +LTV+      D         P++  V AG S  T  C A + P +KL I+W +   P
Sbjct: 180 PITLTVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIIWKKDGVP 239

Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +        +  ++  LT+      ++G Y C A
Sbjct: 240 VSGG-----ISDHNRRLTILNPKGSNTGYYECEA 268



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 96/236 (40%), Gaps = 24/236 (10%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V WN +      G   GYKV  + EKD +   +  +V  
Sbjct: 1180 VPSSGPTNVSALATTSSS-MLVRWNEIPEADRNGLVLGYKV-VYKEKDSDTQPQFWLVEG 1237

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    +  +
Sbjct: 1238 NSSLSAQLTGLGRYVLYEIQVLAFTRIGDGTPSSPPILERTLDDVPGPPMGILFPEVRPT 1297

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P + Y
Sbjct: 1298 SVRLIWQPPSAPNGIILAYQITHRLNTTTANTASVEVL----TPSARQYTATGLKPESIY 1353

Query: 579  RIHLAGYTKAGDGAESKYLFYV------------PFKNPDNVEGRGSTPNNLVISW 622
               +   T+ G G  ++ L               P  N +NV+ R     ++++SW
Sbjct: 1354 LFRIMAQTRKGWGEAAEALVVTTEKRDRPQPPSKPVINQENVKAR-----SVLLSW 1404



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 115/271 (42%), Gaps = 46/271 (16%)

Query: 414  IDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDK 469
            + A+  ++SW P    +SP       R Y +Q+    +G+ ++    V    +T+  VD+
Sbjct: 1395 VKARSVLLSWEPGSDGLSP------VRYYTIQSRELPNGKWALHSSSVTHN-ATSFVVDR 1447

Query: 470  FVPASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKW 524
              P +    RV + N   +   SE    +T     PE  P     L   P  +++  + W
Sbjct: 1448 LKPFTSYKFRVKSTNDIGDSEYSEESESLTTLQAAPEEAPTI---LSVTPHTTTSVLISW 1504

Query: 525  VKP--EQPNGVLMGYKIKYQSV---------------KGTKVGPL--LERLPYISDPTTT 565
              P  ++ NG+L+G++I+Y+ +                 TK   L  +  +  +S P+ T
Sbjct: 1505 QPPAEDKINGILLGFRIRYRELLYEGLRGFTMRNINNPSTKWAELTSMYAVRNLSRPSLT 1564

Query: 566  SAKLAGLEPSTKYRIHLAGYTKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVI 620
              +L  L    +Y I ++ Y   G+G  S  + +F    VP   P NV   G+T   L +
Sbjct: 1565 QYELDNLSKHKRYEIRMSVYNAVGEGPSSSPQEVFVGEAVPTAPPQNVAVHGATATQLDV 1624

Query: 621  SWTAMPEIEHNAPHFKYRI-FW--RRHNTGE 648
            +W   P    N     Y+I FW  +R N+ E
Sbjct: 1625 TWEPPPLEAQNGDIQGYKIYFWEAQRRNSTE 1655



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 126/308 (40%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 940  LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGAPTNLGISN---------- 985

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKD-----GEGSIRELI---VNKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +      GEG    LI    N+ ++ + EV    P
Sbjct: 986  IGPRSVTLQFRPGYDGKTSISRWLVEAQVAVVGEGEEWLLIHQLTNEPDARSMEVPNLNP 1045

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 1046 YTFYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTA---SETSLWLRWMPL 1102

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY    G   G  L  +  + D       +  LE  T+YR+ + 
Sbjct: 1103 PEMEYNGNPESVGYKIKYTRSDGH--GKTLSHV--VHDRIEREYTIEDLEEWTEYRVQVQ 1158

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S+ +       VP   P NV    +T +++++ W  +PE + N     Y+
Sbjct: 1159 AFNAIGTGPWSQIVVGRTRESVPSSGPTNVSALATTSSSMLVRWNEIPEADRNGLVLGYK 1218

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1219 VVYKEKDS 1226



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P N   +    A +  V+W P   ++  G  +GYK+  W E     S   L    
Sbjct: 1604 VPTAPPQNVA-VHGATATQLDVTWEPPPLEAQNGDIQGYKIYFW-EAQRRNSTERLKTLF 1661

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
                  ++      +     V AFN A +GP S      T +  P     ++   L +++
Sbjct: 1662 LPENGVKLKNLTGYTAYLVSVAAFNAAGDGPRSAPSQGRTQQAAPSAPSMVKFSELTTTS 1721

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P  PNGVL GY++ Y+
Sbjct: 1722 VNVSWEPPLFPNGVLEGYRLIYE 1744



 Score = 39.7 bits (91), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 51/221 (23%), Positives = 81/221 (36%), Gaps = 36/221 (16%)

Query: 401  PLEAPSNFTLIQVI--DAKKAVVSWNPVSPQSLRGHFRGYKVQ----------------- 441
            P EAP   T++ V        ++SW P +   + G   G++++                 
Sbjct: 1483 PEEAP---TILSVTPHTTTSVLISWQPPAEDKINGILLGFRIRYRELLYEGLRGFTMRNI 1539

Query: 442  -----TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS 496
                  W E     ++R L  ++   T  E+D      +   R+  +N    GP S    
Sbjct: 1540 NNPSTKWAELTSMYAVRNL--SRPSLTQYELDNLSKHKRYEIRMSVYNAVGEGPSSSPQE 1597

Query: 497  FVTPEGVP-GTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLL 553
                E VP    Q++      ++   + W  P  E  NG + GYKI +   +        
Sbjct: 1598 VFVGEAVPTAPPQNVAVHGATATQLDVTWEPPPLEAQNGDIQGYKIYFWEAQRRNS---T 1654

Query: 554  ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            ERL  +  P     KL  L   T Y + +A +  AGDG  S
Sbjct: 1655 ERLKTLFLPEN-GVKLKNLTGYTAYLVSVAAFNAAGDGPRS 1694


>gi|296203082|ref|XP_002806914.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-2 [Callithrix
           jacchus]
          Length = 2108

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 179/605 (29%), Positives = 256/605 (42%), Gaps = 32/605 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V     +V L C+    PL +   IW KDGV +  S  IS  N  + L I +   S
Sbjct: 242 KNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGVLL--SGGISDHN--RRLTIPNPTAS 297

Query: 98  DQGSYTCEVSNGVGEAKSY--SIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPE 154
           D G Y CE         S      LSVL  P F  EPE  I A  E+ V   C+A G+P 
Sbjct: 298 DAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQFVKEPERHITAEMEKVVDIPCRAKGVPP 357

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
           P I W  +   +        R+     + I  L   DTG + C A NS G V    Y+ V
Sbjct: 358 PSISWYKDAAVVEVEKLARFRQRSDGGLQISGLVPDDTGMFQCFARNSAGEVQTSTYLAV 417

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILET 269
            + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T LE+
Sbjct: 418 TSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLES 477

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+  C
Sbjct: 478 GSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVC 537

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
               DP + +  VW +    +  ES PR     + SL ++++   D G YTCR  +    
Sbjct: 538 GVTHDPRVTIRYVWEKDGATLGMESNPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGN 597

Query: 390 IEAQATLTVQVPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
               A L V+    AP +    +  ++ +   ++W    P         Y ++  +E + 
Sbjct: 598 DSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTW--AKPFDGNSPLIRYVLEM-SENNA 654

Query: 449 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ 508
             ++    V+  ++T+  V   VPA     R+ A N    G  S+    V+    P T  
Sbjct: 655 PWTVLLASVDP-KATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAP 713

Query: 509 SLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT 564
               I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I+D   
Sbjct: 714 PQNVIASGRTNQSIMIQWQPPAESHQNGILKGYIIRY-CLAGLPVG---YQFKNITDADV 769

Query: 565 TSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLV 619
            +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    +    + 
Sbjct: 770 NNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIR 829

Query: 620 ISWTA 624
            +W A
Sbjct: 830 FTWNA 834



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 177/687 (25%), Positives = 270/687 (39%), Gaps = 80/687 (11%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K Q V+  +   +R  ++  F      P PQ  W +DG  I PS RI+      +L+I  
Sbjct: 139 KHQSVSHGEAAVIRAPRIASF------PRPQVTWFRDGRKIPPSSRIAI-TLENTLVILS 191

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV---LAAPYFTVEPEFINAAEEET------ 142
               D G Y  + V++  G+ K S  I L+V   +  P   + P  I   +  +      
Sbjct: 192 TVAPDAGRYYVQAVNDKNGDNKTSQPITLAVERDVGGPADPIAPTIIIPPKNTSVVAGTS 251

Query: 143 -VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA 199
            VT EC A+  P  ++H  W  +G  +S    +  R     R+TI N   SD G Y C A
Sbjct: 252 EVTLECVANARPLIKLHIIWKKDGVLLSGGISDHNR-----RLTIPNPTASDAGYYECEA 306

Query: 200 ---TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHN 255
              ++S+  V +  Y++VL   P+  + P+   T + + VV + CR  G P P ++W  +
Sbjct: 307 VLRSSSVPSVVRGAYLSVL-EPPQFVKEPERHITAEMEKVVDIPCRAKGVPPPSISWYKD 365

Query: 256 QKEL---TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHIT 311
              +      R+     G L+I+ +   D+G + CFARN  G  Q S  L V     +IT
Sbjct: 366 AAVVEVEKLARFRQRSDGGLQISGLVPDDTGMFQCFARNSAGEVQTSTYLAVTSIAPNIT 425

Query: 312 DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVT 369
             P D  V  G S    C     P  + +I W +G   +   S   PRF      SL ++
Sbjct: 426 RGPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTPLESGSLLIS 483

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAV-VSWNP 425
            +   D+G YTC A       EA A L V       + P + ++I+   A     V+ +P
Sbjct: 484 PTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVCGVTHDP 543

Query: 426 VSPQSLR------GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR 479
               ++R      G   G +       D  GS+       G+  T    + + A  N +R
Sbjct: 544 RV--TIRYVWEKDGATLGMESNPRIRLDRNGSLHISQTWSGDIGTYTC-RVISAGGNDSR 600

Query: 480 V--LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
              L      + P   + +  T E                 A  L W KP   N  L+ Y
Sbjct: 601 SAHLRVRQLPHAPEHPVATLSTVE---------------RRAINLTWAKPFDGNSPLIRY 645

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL 597
            ++  S        LL  +    DP  TS  + GL P+  Y+  L      G G  SK  
Sbjct: 646 VLE-MSENNAPWTVLLASV----DPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDT 700

Query: 598 FYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWN 651
             V      P   P NV   G T  +++I W    E   N     Y I +        + 
Sbjct: 701 ERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPAESHQNGILKGYIIRYCLAGLPVGYQ 760

Query: 652 QDDVLDWRQSELVLANQPTFQPYEIKV 678
             ++ D   + L+L +   +  YEI+V
Sbjct: 761 FKNITDADVNNLLLEDLIIWTNYEIEV 787



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 107/275 (38%), Gaps = 28/275 (10%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           +PYF  EP       E   +   C A G    E  W+HN + +++            R  
Sbjct: 44  SPYFKTEPVRTQVHLEGNRLVLTCMAEGSWPLEFKWLHNNRELTKFSLE-------YRYM 96

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RV 242
           I +L ++  G Y C   N +G + +      +A+     E  K +    G+  V+   R+
Sbjct: 97  ITSLDRTHAGFYRCIVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAAVIRAPRI 156

Query: 243 FGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSG 300
              P+P+V W  + +++    R  I     L I      D+G Y   A N K G  + S 
Sbjct: 157 ASFPRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQ 216

Query: 301 SLTVKEHTHI-----------TDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSE 348
            +T+     +              P++  V AG S  T  C A + P +KL I+W +   
Sbjct: 217 PITLAVERDVGGPADPIAPTIIIPPKNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGV 276

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            +        +  ++  LT+   +  D+G Y C A
Sbjct: 277 LLSGG-----ISDHNRRLTIPNPTASDAGYYECEA 306



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ V      G   GYKV  + EKD +   R  +V  
Sbjct: 1133 VPSSGPTNVSALATTSSS-MLVRWSDVPEADRNGLVLGYKV-IYKEKDSDAQPRFWLVEG 1190

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1191 NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGRPSHPPILERTLDDVPGPPMGILFPEVRTT 1250

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T    ++E L     P+       GL+P + Y
Sbjct: 1251 SVRLIWQPPAAPNGIILAYQITHRLNTTTANTAMVEVL----APSARQYTATGLKPESVY 1306

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1307 LFRITAQTRKGWGEAAEAL 1325



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N  ++    A +  V+W P    S  G  +GYK+  W  +    + R   +  
Sbjct: 1558 VPTAAPRNV-VVHGATATQLDVTWEPPPLDSQNGDIQGYKIYFWEAQRQNLTERVKTLFL 1616

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E++  ++      +     V AFN A +GP S      T +  P    S++   L +++
Sbjct: 1617 AENSV-KLKNLTGYTAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSAPSSVQFSELTTTS 1675

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNG+L GY++ Y+
Sbjct: 1676 VNVSWEAPQFPNGILEGYRLVYE 1698



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/305 (22%), Positives = 131/305 (42%), Gaps = 42/305 (13%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 893  LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGPPTNLGISN---------- 938

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +   G + E    L++    N+ ++ + EV    P
Sbjct: 939  IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNP 998

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLEAIPLGS-SAFYLKWVK-PEQ 529
             +    R+   N     PPS+    + T +  P    +  ++P  S ++ +L+W+  PE 
Sbjct: 999  FTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLPTASETSLWLRWMPLPEM 1058

Query: 530  P---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYT 586
                N   +GYKIKY    G   G  L  +  + D       +  LE  T+YR+ +  + 
Sbjct: 1059 EYNGNPESVGYKIKYSRSDGH--GKTLSHV--VQDRVEREYTIEDLEEWTEYRVQVQAFN 1114

Query: 587  KAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
              G G  S+ +       VP   P NV    +T +++++ W+ +PE + N     Y++ +
Sbjct: 1115 AIGSGPWSQTVMGRTRESVPSSGPTNVSALATTSSSMLVRWSDVPEADRNGLVLGYKVIY 1174

Query: 642  RRHNT 646
            +  ++
Sbjct: 1175 KEKDS 1179



 Score = 47.4 bits (111), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 30/208 (14%)

Query: 510  LEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSV--KGTKVGPL------------- 552
            L   P  +++  ++W  P  ++ NGVL+G++I+Y+ +  +G +   L             
Sbjct: 1444 LSVTPHTTTSVLIRWQPPAEDKINGVLLGFRIRYRELLYEGLRGFTLRGINNPGATWAEL 1503

Query: 553  --LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES--KYLFY---VPFKNP 605
              +  +  +S P+ T  +L  L    +Y I ++ Y   G+G  S    +F    VP   P
Sbjct: 1504 TSMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSPPHEVFVGEAVPTAAP 1563

Query: 606  DNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI-FW--RRHNTGEAWNQDDVLDWRQSE 662
             NV   G+T   L ++W   P    N     Y+I FW  +R N  E   +   L   ++ 
Sbjct: 1564 RNVVVHGATATQLDVTWEPPPLDSQNGDIQGYKIYFWEAQRQNLTE---RVKTLFLAENS 1620

Query: 663  LVLANQPTFQPYEIKVVQTWTEKDGEGS 690
            + L N   +  Y + V       DG  S
Sbjct: 1621 VKLKNLTGYTAYMVSVAAFNAAGDGPRS 1648



 Score = 41.2 bits (95), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 85/220 (38%), Gaps = 34/220 (15%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ------------------- 441
            P EAP+  + +        ++ W P +   + G   G++++                   
Sbjct: 1437 PDEAPTILS-VTPHTTTSVLIRWQPPAEDKINGVLLGFRIRYRELLYEGLRGFTLRGINN 1495

Query: 442  ---TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
               TW E     S+R L  ++   T  E+D      +   R+  +N    GP S      
Sbjct: 1496 PGATWAELTSMYSMRNL--SRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSPPHEVF 1553

Query: 499  TPEGVPGTVQSLEAIPLGSSAFYLK--WVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLE 554
              E VP T      +  G++A  L   W  P  +  NG + GYKI +   +   +   ++
Sbjct: 1554 VGEAVP-TAAPRNVVVHGATATQLDVTWEPPPLDSQNGDIQGYKIYFWEAQRQNLTERVK 1612

Query: 555  RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
             L ++++    S KL  L   T Y + +A +  AGDG  S
Sbjct: 1613 TL-FLAE---NSVKLKNLTGYTAYMVSVAAFNAAGDGPRS 1648


>gi|350590168|ref|XP_003131297.2| PREDICTED: protein sidekick-2, partial [Sus scrofa]
          Length = 2201

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 178/605 (29%), Positives = 256/605 (42%), Gaps = 32/605 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V     +V + C+    PL +   IW KDG  +  S  IS  +Y + L I +   S
Sbjct: 251 KNTSVVAGTSEVTMECVANARPLIKLHIIWKKDGALL--SGGIS--DYNRRLTIPNPTGS 306

Query: 98  DQGSYTCEVSNGVGEAKSY--SIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPE 154
           D G Y CE         S      LSVL  P F  EPE  I A  E+ V   C+A G+P 
Sbjct: 307 DAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQFVKEPERHITAEMEKVVDVPCRAKGVPP 366

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
           P I W  +   +     +  R+ G   + I  L   DTG + C A N+ G V    Y+ V
Sbjct: 367 PSITWYKDAAVVEVERLSRFRQRGDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAV 426

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILET 269
            + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T+LE+
Sbjct: 427 TSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLES 486

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+  C
Sbjct: 487 GSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVC 546

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
               DP +    VW +    +  E  PR       SL ++++   D G YTCR  +    
Sbjct: 547 GVTHDPRVTTRYVWEKDGTTLSLEGNPRLRLDKSGSLHISQTWSGDIGTYTCRVLSAGGN 606

Query: 390 IEAQATLTVQVPLEAPSNFTLIQVIDAKKAV-VSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
               A L V+    AP +         ++A+ ++W    P         Y ++  +E + 
Sbjct: 607 DSRSAHLRVRQLPHAPEHPVATLSTAERRAINLTWG--KPFDGNSPLSRYILEV-SENNA 663

Query: 449 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ 508
             ++    V+  E+T+  V   VPA     R+ A N    G  S+    V+    P T  
Sbjct: 664 PWAVLLASVDP-EATSVTVKGLVPARTYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAP 722

Query: 509 SLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT 564
               I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I+D   
Sbjct: 723 PQNVIASGRTNQSIMIQWQPPPESHQNGLLKGYIIRY-CLAGLPVG---YQFKNITDADV 778

Query: 565 TSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLV 619
            +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    +    + 
Sbjct: 779 NNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIR 838

Query: 620 ISWTA 624
            +W A
Sbjct: 839 FTWNA 843



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 182/685 (26%), Positives = 271/685 (39%), Gaps = 77/685 (11%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K Q V+  +   +   ++  F      P PQ  W +DG  I PS RI+      +L+I  
Sbjct: 149 KHQSVSHGEAAVIHAPRIASF------PRPQVTWFRDGRKIPPSSRIAI-TLENTLVILS 201

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFINAAEEET------- 142
               D G Y  + V++  G+ K S  I L+V  +  P   + P  I   +  +       
Sbjct: 202 TVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSE 261

Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
           VT EC A+  P  ++H  W  +G  +S    +  R     R+TI N   SD G Y C A 
Sbjct: 262 VTMECVANARPLIKLHIIWKKDGALLSGGISDYNR-----RLTIPNPTGSDAGYYECEAV 316

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+  V +  Y++VL   P+  + P+   T + + VV + CR  G P P + W  + 
Sbjct: 317 LRSSSVPSVVRGAYLSVL-EPPQFVKEPERHITAEMEKVVDVPCRAKGVPPPSITWYKDA 375

Query: 257 KELTGGRYTILET---GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHITD 312
             +   R +       G L+I+ +   D+G + CFARN  G  Q S  L V     +IT 
Sbjct: 376 AVVEVERLSRFRQRGDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAVTSIAPNITR 435

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTK 370
            P D  V  G S    C     P  + +I W +G   +   S   PRF      SL ++ 
Sbjct: 436 GPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTLLESGSLLISP 493

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAV-VSWNPV 426
           +   D+G YTC A       EA A L V       + P + ++I+   A     V+ +P 
Sbjct: 494 THISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVCGVTHDP- 552

Query: 427 SPQSLRGHFRGYKVQTWTEKDG-----EGSIRELIVNKGESTTTEVDKFVPASKNFARVL 481
                    R      W EKDG     EG+ R L ++K  S                RVL
Sbjct: 553 ---------RVTTRYVW-EKDGTTLSLEGNPR-LRLDKSGSLHISQTWSGDIGTYTCRVL 601

Query: 482 AFNGAYNGPPSEIISFV--TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKI 539
           +  G  +      +  +   PE    T+ + E       A  L W KP   N  L  Y +
Sbjct: 602 SAGGNDSRSAHLRVRQLPHAPEHPVATLSTAE-----RRAINLTWGKPFDGNSPLSRYIL 656

Query: 540 KYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY 599
           +  S        LL  +    DP  TS  + GL P+  Y+  L      G G  SK    
Sbjct: 657 EV-SENNAPWAVLLASV----DPEATSVTVKGLVPARTYQFRLCAVNDVGKGQFSKDTER 711

Query: 600 V------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQD 653
           V      P   P NV   G T  +++I W   PE   N     Y I +        +   
Sbjct: 712 VSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGLLKGYIIRYCLAGLPVGYQFK 771

Query: 654 DVLDWRQSELVLANQPTFQPYEIKV 678
           ++ D   + L+L +   +  YEI+V
Sbjct: 772 NITDADVNNLLLEDLIIWTNYEIEV 796



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 11/177 (6%)

Query: 422  SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR-- 479
            +WN  SPQ + G  +GYK+  W E + E  +  +        +  V  FV   K F    
Sbjct: 840  TWNAPSPQFINGINQGYKLIAW-EPEQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYF 897

Query: 480  --VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
              VL F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY
Sbjct: 898  TSVLCFTTPGDGPRSTPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGY 957

Query: 538  KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            +I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 958  RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTAKGQGQVS 1009



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 105/273 (38%), Gaps = 27/273 (9%)

Query: 126 PYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
           PYF  EP       E   +   C A G    E  W+HN + +++            R  I
Sbjct: 55  PYFKTEPVRTQVHLEGNRLVLTCMAEGSWPLEFKWLHNNRELTKFSLE-------YRYMI 107

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RVF 243
            +L ++  G Y C   N +G + +      +A+     E  K +    G+  V+   R+ 
Sbjct: 108 TSLDRTHAGFYRCIVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAAVIHAPRIA 167

Query: 244 GAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSGS 301
             P+P+V W  + +++    R  I     L I      D+G Y   A N K G  + S  
Sbjct: 168 SFPRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQP 227

Query: 302 LTVK----------EHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEPI 350
           +T+               I   P++  V AG S  T  C A + P +KL I+W +    +
Sbjct: 228 ITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIIWKKDGALL 287

Query: 351 DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
                   +   +  LT+   +  D+G Y C A
Sbjct: 288 SGG-----ISDYNRRLTIPNPTGSDAGYYECEA 315



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 113/271 (41%), Gaps = 46/271 (16%)

Query: 414  IDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDK 469
            + A+  ++SW P    +SP       R Y +QT     G  ++    V+   ST   VD+
Sbjct: 1442 VKARSVLLSWEPGSDGLSP------VRYYTIQTRELPGGRWALHSASVSHNASTFV-VDR 1494

Query: 470  FVPASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKW 524
              P +    RV A N   +   SE    +T     P+  P  V      P  +++  ++W
Sbjct: 1495 LKPFTSYKFRVKATNDIGDSEFSEESEPLTTLQAAPDEAPAIVS---VTPHTTTSVLIRW 1551

Query: 525  VKP--EQPNGVLMGYKIKYQSV---------------KGTKVGPL--LERLPYISDPTTT 565
              P  ++ NG+L+G++I+Y+ +                G K   L  L  +  +S P+ T
Sbjct: 1552 QPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELTPLYSVRNLSRPSLT 1611

Query: 566  SAKLAGLEPSTKYRIHLAGYTKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVI 620
              +L  L    +Y I ++ Y   G+G  S  + +F    VP   P NV   G+T   L +
Sbjct: 1612 QYELDNLNKHRRYEIRMSVYNAVGEGPSSPPQEVFVGEAVPTAAPRNVAVHGATATQLDV 1671

Query: 621  SWTAMPEIEHNAPHFKYRI-FW--RRHNTGE 648
            +W   P    N     Y+I FW  +R N  E
Sbjct: 1672 TWEPPPLESQNGDIQGYKIYFWEAQRRNLTE 1702



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 84/199 (42%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V WN V      G   GYKV  + EKD +   R  +V  
Sbjct: 1227 VPSSGPTNVSALATTSSS-MLVRWNEVPEADRNGLVLGYKVM-YKEKDSDSQPRFWLVEG 1284

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1285 NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGVPSHPPILERTLDDVPGPPMGILFPEVRTT 1344

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P + Y
Sbjct: 1345 SVRLIWQPPAAPNGIILAYQITHRLNATTANTATVEVL----APSARQYTATGLKPESVY 1400

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1401 LFRITAQTRKGWGEAAEAL 1419



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N   +    A +  V+W P   +S  G  +GYK+  W  +    + R   +  
Sbjct: 1651 VPTAAPRNVA-VHGATATQLDVTWEPPPLESQNGDIQGYKIYFWEAQRRNLTERVKTLFL 1709

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E+   ++      +     V AFN A +GP S      T +  P    S++   L +++
Sbjct: 1710 AENGV-KIKNLTGYTAYMVSVAAFNAAGDGPRSTPTRGQTQQAAPSAPSSVKFSELTTTS 1768

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNG+L GY++ Y+
Sbjct: 1769 VNVSWEAPQFPNGILEGYRLVYE 1791



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 126/308 (40%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 987  LTALTTYTIEVAAMTAKGQGQV----SASTISSGVPPELPGAPTNLGISN---------- 1032

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKD-----GEGSIRELI---VNKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +      GEG    LI    N+ ++ + EV    P
Sbjct: 1033 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLTNEPDTRSMEVPDLNP 1092

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 1093 FTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTA---SETSLWLRWMPL 1149

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY    G   G  L  +  + D       +  LE  T+YR+ + 
Sbjct: 1150 PEMEYNGNPESVGYKIKYSRADGH--GKTLSHV--VQDRVEREYTIEDLEEWTEYRVQVQ 1205

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S+ +       VP   P NV    +T +++++ W  +PE + N     Y+
Sbjct: 1206 AFNAIGSGPWSQTVMGRTRESVPSSGPTNVSALATTSSSMLVRWNEVPEADRNGLVLGYK 1265

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1266 VMYKEKDS 1273


>gi|405958312|gb|EKC24451.1| Neuroglian [Crassostrea gigas]
          Length = 1178

 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 134/387 (34%), Positives = 194/387 (50%), Gaps = 11/387 (2%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
            LR +  +L CIF G P P+  W K+   +     +S G  G+ L I ++   D G Y C
Sbjct: 42  GLRGETFKLKCIFSGNPTPEVFWLKNKADLPDYYEVSLG--GQELTIPNLTEEDAGPYEC 99

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
             +N  G     +  + V + PY+  EP+ +  +   + TF CKA G PEP+I W  NG 
Sbjct: 100 YGTNTQGPRAFRNFVIRVESKPYWEEEPKDVETSVGASTTFICKAKGYPEPKIAWFVNGI 159

Query: 165 PISQAP-PNPR--RKVGP--NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
            + ++  P  R  R + P  N IT   L K+D     CNA+N  GYV+ DVY+N+L   P
Sbjct: 160 KLEESTVPIVRSERFIKPDANNITFVQLNKNDHMVLQCNASNIHGYVFADVYLNILEEEP 219

Query: 220 EITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVA 278
            I   P  E  V +G+ + LTC   G P P + W    +++TGGRY I + G+L + +V 
Sbjct: 220 AIIVPPAKELKVAEGRDIELTCITSGKPDPIITWRKEGEQITGGRYQIQQNGNLHVQNVV 279

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS-- 336
            +D+G YTC A NK    +  G L V+  T    +P   EV AG  A F C+  +D +  
Sbjct: 280 LSDAGNYTCHAYNKYNFDEAWGILIVRAKTRTVQKPGGLEVTAGSDAKFTCSGTTDFAEI 339

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             L I WL+ ++PI    +       D SLT++ +   DSG YTC     LD   A A L
Sbjct: 340 KNLRISWLKDNKPITTNDQRMTQNFQDNSLTISGTIARDSGTYTCVVSNGLDNATAGAIL 399

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW 423
           TV+   + P +  LI   +  +A +SW
Sbjct: 400 TVKDKPDPPISVALITCGET-EAEISW 425



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 134/579 (23%), Positives = 207/579 (35%), Gaps = 50/579 (8%)

Query: 125 APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
           A Y    P        ET   +C  SG P PE+ W+ N    +  P      +G   +TI
Sbjct: 30  AEYLWASPSDHFGLRGETFKLKCIFSGNPTPEVFWLKNK---ADLPDYYEVSLGGQELTI 86

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFG 244
            NL + D G Y C  TN+ G      +V  +   P   E PKD  T  G +    C+  G
Sbjct: 87  PNLTEEDAGPYECYGTNTQGPRAFRNFVIRVESKPYWEEEPKDVETSVGASTTFICKAKG 146

Query: 245 APKPEVNWIHNQKEL--------TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTA 296
            P+P++ W  N  +L           R+   +  ++    +   D     C A N  G  
Sbjct: 147 YPEPKIAWFVNGIKLEESTVPIVRSERFIKPDANNITFVQLNKNDHMVLQCNASNIHGYV 206

Query: 297 QGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
                L + E       P   E++  +        ++       I W +  E I   +  
Sbjct: 207 FADVYLNILEEEPAIIVPPAKELKVAEGRDIELTCITSGKPDPIITWRKEGEQI---TGG 263

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQV 413
           R+    + +L V      D+G YTC A  + +F EA   L V+     ++ P    +   
Sbjct: 264 RYQIQQNGNLHVQNVVLSDAGNYTCHAYNKYNFDEAWGILIVRAKTRTVQKPGGLEVTAG 323

Query: 414 IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPA 473
            DAK         S  +     +  ++ +W + +     + +  N    T    D  +  
Sbjct: 324 SDAKFTC------SGTTDFAEIKNLRI-SWLKDN-----KPITTNDQRMTQNFQDNSLTI 371

Query: 474 SKNFAR------VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKP 527
           S   AR       +  NG  N     I+   T +  P    S+  I  G +   + W K 
Sbjct: 372 SGTIARDSGTYTCVVSNGLDNATAGAIL---TVKDKPDPPISVALITCGETEAEISWTKG 428

Query: 528 EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
              N  +  + I+Y     T   P    +   +   T ++    L P  +Y   +    K
Sbjct: 429 ASNNAPIQYFIIQYN----TSFSPDEWFMGASNVLATQNSGEVKLTPWVEYNFRVLATNK 484

Query: 588 AGDGAESKYLFYV-------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
            G    S +   V       P KNP+NV   G   N L+I WT MP IEHN   FKY + 
Sbjct: 485 IGISEPSYHTETVCKTNAARPSKNPENVRTIGDKRNYLIIEWTPMPPIEHNGQQFKYILT 544

Query: 641 WRRHNTG-EAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            +R   G +      + +W Q          F PY I +
Sbjct: 545 IQREGQGLDQVTPVTISEWSQFRYEKQTNDIFTPYLITI 583



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 97/225 (43%), Gaps = 30/225 (13%)

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHFRGYKVQTWTEKDGEGSI 452
           +P    +N  + Q +        W        P +   ++G FRG+K+Q W     + + 
Sbjct: 607 IPTAMVANLEVDQQVSDSSVTFYWEWDDNLNKPYASSPVKGIFRGFKIQYWVRGKKDLTF 666

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVL--------------AFNGAYNGPPSEIISFV 498
           +E  +   + T     +   A++++  VL                N  Y GPPS I SF 
Sbjct: 667 QEAEILLSDLTLRNARRKKRATQSYKYVLTGLLGYQNYEAQMRVVNTYYAGPPSVITSFT 726

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMG---------YKIKYQSVKGTKV 549
           T  GV G V++L     GS+   L W  PE  + +L G         Y I YQ+V G  +
Sbjct: 727 TELGVTGPVRNLRIAQTGSNFILLAWDPPEVVDQLLFGSNWYNLLSGYDIGYQTVSGLDL 786

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           G L E++P ++DP T    + GL  STKYR+++      G G  S
Sbjct: 787 GNLQEKIPDLTDPRTNDTYVNGLVYSTKYRLYVWPKNTKGRGEVS 831


>gi|351712766|gb|EHB15685.1| Neuronal cell adhesion molecule, partial [Heterocephalus glaber]
          Length = 843

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 155/497 (31%), Positives = 232/497 (46%), Gaps = 24/497 (4%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDL 120
           P P   W K+   + P++R    N+ K+L I  V  +D G+Y C   N +G A  ++I +
Sbjct: 1   PTPIIYWIKEDGTL-PTNRTFYRNFKKTLQIIQVSEADSGNYQCIAKNALG-AIHHTISV 58

Query: 121 SVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN 180
           +V AAPY+ + P+ +  +  E  T  C+A+G P+P I W+ NG PI  AP +P R++  +
Sbjct: 59  TVKAAPYWIMAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPIEIAPDDPSRRIDGD 118

Query: 181 RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLT 239
            I   N+++  +  Y CNA+N  GY+  + +VNVLA  P I  +    Y V   +   L 
Sbjct: 119 TIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTSENTLYQVIANRPAFLD 178

Query: 240 CRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQ 297
           C  FG+P P + W    K   L    Y + E G L+I       +G YTC ARNKLG A+
Sbjct: 179 CAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAPKNSTGTYTCVARNKLGIAK 238

Query: 298 GSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
               L +K+ T I  QPE   V+ G + TF C    D +L  ++ WL+ +   +  S+ R
Sbjct: 239 NEVHLEIKDPTRILKQPEYAVVQRGSTVTFECKVKHDHTLIATVTWLKDNG--ELPSDER 296

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAK 417
           F    D+ L VT   + D G YTC A T LD + A A L+V      P +  L   +D K
Sbjct: 297 FTVDKDH-LVVTDVRDNDGGTYTCVANTTLDDVSASAELSVVDVPNPPFDLELTNQLD-K 354

Query: 418 KAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 477
              +SW P    +       + ++        G  R      G  TT ++ K  P     
Sbjct: 355 SVQLSWTPGDDNN--SPITKFIIEYEDAMHESGLWRHQAEVSGTQTTAQL-KLSPHVNYS 411

Query: 478 ARVLAFNGAYNGPPSE-----IISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPE---Q 529
            RV+A N      PSE     +     P+  P  V+ L + P       + W KP    +
Sbjct: 412 FRVMAENSIGRSLPSEGSEQYLTKAAEPDKNPTAVEGLGSEP---DNLVITW-KPLNGFE 467

Query: 530 PNGVLMGYKIKYQSVKG 546
            NG  + YK+ ++   G
Sbjct: 468 SNGPGLQYKVSWRQKDG 484



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 128/513 (24%), Positives = 216/513 (42%), Gaps = 42/513 (8%)

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR 241
           + I  + ++D+GNY C A N+LG ++  + V V A AP    AP++     G+   L CR
Sbjct: 28  LQIIQVSEADSGNYQCIAKNALGAIHHTISVTVKA-APYWIMAPQNLVLSPGEDGTLICR 86

Query: 242 VFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQG 298
             G PKP ++W+ N    E+     +    GD  I ++V    S  Y C A N+ G    
Sbjct: 87  ANGNPKPRISWLTNGVPIEIAPDDPSRRIDGDTIIFSNVQERSSAVYQCNASNEYGYLLA 146

Query: 299 SGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           +  + V       +T +   Y+V A + A   C     P    +I W +G++      E 
Sbjct: 147 NAFVNVLAEPPRILTSENTLYQVIANRPAFLDCAFFGSP--LPTIEWFKGAKGSALH-ED 203

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQV 413
            +V   + +L +  + +  +G YTC A+ +L   + +  L ++ P   L+ P  + ++Q 
Sbjct: 204 IYVLHENGTLEIPVAPKNSTGTYTCVARNKLGIAKNEVHLEIKDPTRILKQPE-YAVVQ- 261

Query: 414 IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE-GSIRELIVNKGESTTTEVDKFVP 472
              + + V++       ++         TW + +GE  S     V+K     T+V     
Sbjct: 262 ---RGSTVTFE----CKVKHDHTLIATVTWLKDNGELPSDERFTVDKDHLVVTDVRDNDG 314

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
            +         +         ++       VP     LE       +  L W   +  N 
Sbjct: 315 GTYTCVANTTLDDVSASAELSVVD------VPNPPFDLELTNQLDKSVQLSWTPGDDNNS 368

Query: 533 VLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG--- 589
            +  + I+Y+         L      +S  T T+A+L  L P   Y   +      G   
Sbjct: 369 PITKFIIEYED--AMHESGLWRHQAEVSG-TQTTAQLK-LSPHVNYSFRVMAENSIGRSL 424

Query: 590 --DGAESKYLFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
             +G+E +YL     P KNP  VEG GS P+NLVI+W  +   E N P  +Y++ WR+ +
Sbjct: 425 PSEGSE-QYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKD 483

Query: 646 TGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
             + W    V+    S+ +++  PTF PY IKV
Sbjct: 484 GDDEWTS--VVVANVSKYIVSGTPTFVPYLIKV 514



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 117/483 (24%), Positives = 183/483 (37%), Gaps = 58/483 (12%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS RI     G ++I  +V+      Y C  S
Sbjct: 83  LICRANGNPKPRISWLTNGVPIEIAPDDPSRRID----GDTIIFSNVQERSSAVYQCNAS 138

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T E              +C   G P P I W    K 
Sbjct: 139 NEYGYLLANAF-VNVLAEPPRILTSENTLYQVIANRPAFLDCAFFGSPLPTIEWFKGAK- 196

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
              A       +  N  + I    K+ TG Y C A N LG    +V++ +      I + 
Sbjct: 197 -GSALHEDIYVLHENGTLEIPVAPKNSTGTYTCVARNKLGIAKNEVHLEI-KDPTRILKQ 254

Query: 225 PKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
           P+      G TV   C+V         V W+ +  EL       ++   L +TDV   D 
Sbjct: 255 PEYAVVQRGSTVTFECKVKHDHTLIATVTWLKDNGELPSDERFTVDKDHLVVTDVRDNDG 314

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A   L     S  L+V +   + + P D E+          N + D S++LS  
Sbjct: 315 GTYTCVANTTLDDVSASAELSVVD---VPNPPFDLEL---------TNQL-DKSVQLS-- 359

Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
           W  G +   PI     E E    +S  +      S    + Q          F + A+ +
Sbjct: 360 WTPGDDNNSPITKFIIEYEDAMHESGLWRHQAEVSGTQTTAQLKLSPHVNYSFRVMAENS 419

Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
           +   +P E    +           T ++ + ++    V++W P++     G    YKV +
Sbjct: 420 IGRSLPSEGSEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 478

Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           W +KDG+     ++V N  +   +    FVP      +V A N     P   ++   + E
Sbjct: 479 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAVVMGHSGE 535

Query: 502 GVP 504
            +P
Sbjct: 536 DLP 538



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 6/172 (3%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           + N+   L C F G+PLP   W K        + I   +   +L I     +  G+YTC 
Sbjct: 170 IANRPAFLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAPKNSTGTYTCV 229

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPE--PEIHWVHNG 163
             N +G AK+  + L +        +PE+       TVTFECK          + W+ + 
Sbjct: 230 ARNKLGIAKN-EVHLEIKDPTRILKQPEYAVVQRGSTVTFECKVKHDHTLIATVTWLKDN 288

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVL 215
               + P + R  V  + + + ++R +D G Y C A  +L  V     ++V+
Sbjct: 289 ---GELPSDERFTVDKDHLVVTDVRDNDGGTYTCVANTTLDDVSASAELSVV 337


>gi|410981644|ref|XP_003997176.1| PREDICTED: protein sidekick-2 [Felis catus]
          Length = 2247

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 178/610 (29%), Positives = 260/610 (42%), Gaps = 42/610 (6%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V     +V + C+    PL +    W KDGVP+  S  IS  +Y + L I     S
Sbjct: 295 KNTSVVAGTSEVTMECVANARPLIKLHITWKKDGVPL--SGGIS--DYNRRLTIPGPTGS 350

Query: 98  DQGSYTCEVSNGVGEAKSYSID-------LSVLAAPYFTVEPE-FINAAEEETVTFECKA 149
           D G Y CE +      +S SI        LSVL  P F  EP+  I A  E+ +   C+A
Sbjct: 351 DAGYYECEAA-----LRSSSIPSVVRGAYLSVLEPPQFVKEPDRHITAEMEKVMDIPCRA 405

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
            G+P P I W  +   +     N  R+ G   + I  L   DTG + C A N+ G V   
Sbjct: 406 KGVPPPSIIWYKDAAVVEVGRLNRFRQRGDGGLQISGLVPDDTGMFQCFARNAAGEVQTS 465

Query: 210 VYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RY 264
            Y+ V + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+
Sbjct: 466 TYLAVTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRF 525

Query: 265 TILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
           T+LE+G L ++    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  
Sbjct: 526 TLLESGSLLVSPTRISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQ 585

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           A+  C    DP + +     +    +  ES PR     + SL ++++   D G YTCR  
Sbjct: 586 ASMVCGVTHDPRVTVRYXXXKDGATLGMESNPRIRLDKNGSLHISQTWSGDIGTYTCRVL 645

Query: 385 TELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV-VSWNPVSPQSLRGHFRGYKVQTW 443
           +        A L V+    AP           ++A+ ++W    P         Y ++  
Sbjct: 646 SAGGNDSRSAHLRVRQLPHAPERPVATLSTAERRAINLTW--AKPFDGNSPLLRYVLEM- 702

Query: 444 TEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGV 503
           +E +   ++    V+  E+T+  V   VPA     R+ A N    G  S+    V+    
Sbjct: 703 SENNAPWTVLLASVDP-EATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEE 761

Query: 504 PGTVQSLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
           P T      I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I
Sbjct: 762 PPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGLLKGYIIRY-CLAGLPVG---YQFKNI 817

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGST 614
           +D    +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    + 
Sbjct: 818 TDADVNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATN 877

Query: 615 PNNLVISWTA 624
              +  +W A
Sbjct: 878 STTIRFTWNA 887



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 179/686 (26%), Positives = 269/686 (39%), Gaps = 79/686 (11%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K Q V+  +   +R  ++  F      P PQ  W +DG  I PS RI+      +L+I  
Sbjct: 193 KYQSVSHGEAAVIRAPRIASF------PRPQVTWFRDGRKIPPSSRIAI-TLENTLVILS 245

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFINAAEEET------- 142
               D G Y  + V++  G+ K S  I L+V  +  P   + P  I   +  +       
Sbjct: 246 TVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSE 305

Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
           VT EC A+  P  ++H  W  +G P+S    +  R     R+TI     SD G Y C A 
Sbjct: 306 VTMECVANARPLIKLHITWKKDGVPLSGGISDYNR-----RLTIPGPTGSDAGYYECEAA 360

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+  V +  Y++VL   P+  + P    T + + V+ + CR  G P P + W  + 
Sbjct: 361 LRSSSIPSVVRGAYLSVL-EPPQFVKEPDRHITAEMEKVMDIPCRAKGVPPPSIIWYKDA 419

Query: 257 KELTGGRYTILET---GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHITD 312
             +  GR         G L+I+ +   D+G + CFARN  G  Q S  L V     +IT 
Sbjct: 420 AVVEVGRLNRFRQRGDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAVTSIAPNITR 479

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTK 370
            P D  V  G S    C     P  + +I W +G   +   S   PRF      SL V+ 
Sbjct: 480 GPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTLLESGSLLVSP 537

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAV-VSWNPV 426
           +   D+G YTC A       EA A L V       + P + ++I+   A     V+ +P 
Sbjct: 538 TRISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVCGVTHDPR 597

Query: 427 SPQSLR------GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
              ++R      G   G +       D  GS+       G+  T    + + A  N +R 
Sbjct: 598 V--TVRYXXXKDGATLGMESNPRIRLDKNGSLHISQTWSGDIGTYTC-RVLSAGGNDSRS 654

Query: 481 --LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
             L      + P   + +  T E                 A  L W KP   N  L+ Y 
Sbjct: 655 AHLRVRQLPHAPERPVATLSTAE---------------RRAINLTWAKPFDGNSPLLRYV 699

Query: 539 IKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF 598
           ++  S        LL  +    DP  TS  + GL P+  Y+  L      G G  SK   
Sbjct: 700 LE-MSENNAPWTVLLASV----DPEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTE 754

Query: 599 YV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
            V      P   P NV   G T  +++I W   PE   N     Y I +        +  
Sbjct: 755 RVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGLLKGYIIRYCLAGLPVGYQF 814

Query: 653 DDVLDWRQSELVLANQPTFQPYEIKV 678
            ++ D   + L+L +   +  YEI+V
Sbjct: 815 KNITDADVNNLLLEDLIIWTNYEIEV 840



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 109/280 (38%), Gaps = 27/280 (9%)

Query: 119 DLSVLAAPYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
           DLS   APYF  EP       E   +   C A G    E  W+HN + +++         
Sbjct: 92  DLSDDVAPYFKTEPVRTQVHLEGNRLVLTCMAEGSWPLEFKWLHNSRELTKFSLE----- 146

Query: 178 GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV 237
              R  I +L ++  G Y C   N +G + +      +A+     E  K +    G+  V
Sbjct: 147 --YRYMITSLDRTHAGFYRCIVRNRMGALLQRQTEVQVAYMGSFEEGEKYQSVSHGEAAV 204

Query: 238 LTC-RVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARN-KLG 294
           +   R+   P+P+V W  + +++    R  I     L I      D+G Y   A N K G
Sbjct: 205 IRAPRIASFPRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNG 264

Query: 295 TAQGSGSLTVK----------EHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVW 343
             + S  +T+               I   P++  V AG S  T  C A + P +KL I W
Sbjct: 265 DNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHITW 324

Query: 344 LRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            +   P+        +   +  LT+   +  D+G Y C A
Sbjct: 325 KKDGVPLSGG-----ISDYNRRLTIPGPTGSDAGYYECEA 359



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 11/177 (6%)

Query: 422  SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR-- 479
            +WN  SPQ + G  +GYK+  W E + E  +  +        +  V  FV   K F    
Sbjct: 884  TWNAPSPQFINGINQGYKLIAW-EPEQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYF 941

Query: 480  --VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
              VL F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY
Sbjct: 942  TSVLCFTTPGDGPRSTPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGY 1001

Query: 538  KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            +I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 1002 RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTAKGQGQVS 1053



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 113/270 (41%), Gaps = 42/270 (15%)

Query: 414  IDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDK 469
            + A+  ++SW P    +SP       R Y VQT     G  ++    V+   S    VD+
Sbjct: 1486 VKARSVLLSWEPGSDGLSP------VRYYTVQTRELPSGRWALHSASVSHNASAFV-VDR 1538

Query: 470  FVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPGTVQSLEAI-PLGSSAFYLKWVKP 527
              P +    RV A N   +   SE      T +  P    ++ ++ P  +++  ++W  P
Sbjct: 1539 LKPFTSYKFRVKATNDIGDSEFSEESEPLTTLQAAPDEAPTIVSVTPHTTTSVLIRWQPP 1598

Query: 528  --EQPNGVLMGYKIKYQSV---------------KGTKVGPL--LERLPYISDPTTTSAK 568
              ++ NG+L+G++I+Y+ +                G K   L  +  +  +S P+ T  +
Sbjct: 1599 AEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELTSMYSMRNLSRPSLTQYE 1658

Query: 569  LAGLEPSTKYRIHLAGYTKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWT 623
            L  L    +Y I ++ Y   G+G  S  + +F    VP   P NV   G+T   L ++W 
Sbjct: 1659 LDNLNKHRRYEIRMSVYNAVGEGPSSPPQEVFVGEAVPTAAPRNVAVHGATATQLDVTWE 1718

Query: 624  AMPEIEHNAPHFKYRI-FW----RRHNTGE 648
              P    N     Y+I FW    +R N  E
Sbjct: 1719 PPPLESQNGDIQGYKIYFWEAQAQRRNVTE 1748



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V WN +      G   GYKV  + EKD +   R  +V  
Sbjct: 1271 VPSSGPTNVSALATTSSS-MLVRWNEIPEADRNGLVLGYKVM-YKEKDSDSQPRFWLVEG 1328

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1329 NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 1388

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y++ ++    T     +E L     P+       GL+P + Y
Sbjct: 1389 SVRLIWQPPAAPNGIILAYQVTHRLNATTANTATVEVL----APSARQYTATGLKPESVY 1444

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1445 LFRITAQTRKGWGEAAEAL 1463



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/308 (22%), Positives = 128/308 (41%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 1031 LTALTTYTIEVAAMTAKGQGQV----SASTISSGVPPELPGAPTNLGISN---------- 1076

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +   G + E    L+V    N+ ++ + EV +  P
Sbjct: 1077 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLVHQLTNEPDARSMEVPELNP 1136

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 1137 FTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTA---SETSLWLRWMPL 1193

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY    G   G  L  +  + D       +  LE  T+YR+ + 
Sbjct: 1194 PEMEYNGNPESVGYKIKYSRADGH--GKTLSHV--VQDRVEREYTIEDLEEWTEYRVQVQ 1249

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S+ +       VP   P NV    +T +++++ W  +PE + N     Y+
Sbjct: 1250 AFNAIGSGPWSQTVMGRTRESVPSSGPTNVSALATTSSSMLVRWNEIPEADRNGLVLGYK 1309

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1310 VMYKEKDS 1317



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 2/144 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N   +    A +  V+W P   +S  G  +GYK+  W  +    ++ E +   
Sbjct: 1695 VPTAAPRNVA-VHGATATQLDVTWEPPPLESQNGDIQGYKIYFWEAQAQRRNVTERVKTL 1753

Query: 460  GESTT-TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSS 518
              +     +      +     V AFN A +GP S      T +  P    S++   L ++
Sbjct: 1754 FLAENGVRLKNLTGYTAYMVSVAAFNAAGDGPRSTPTRGQTQQAAPSAPSSVKFSELTTT 1813

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQ 542
            +  + W  P+ PNG+L GY++ Y+
Sbjct: 1814 SVNVSWEAPQFPNGILEGYRLVYE 1837



 Score = 39.3 bits (90), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 60/271 (22%), Positives = 102/271 (37%), Gaps = 45/271 (16%)

Query: 359  VQSNDYSLTVTKSSELDSGQYTCRAQTEL---DFIEAQATLTV--QVPLEAPSNFTLIQV 413
            V  N  +  V +     S ++  +A  ++   +F E    LT     P EAP   T++ V
Sbjct: 1527 VSHNASAFVVDRLKPFTSYKFRVKATNDIGDSEFSEESEPLTTLQAAPDEAP---TIVSV 1583

Query: 414  I--DAKKAVVSWNPVSPQSLRGHFRGYKVQ----------------------TWTEKDGE 449
                    ++ W P +   + G   G++++                       W E    
Sbjct: 1584 TPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELTSM 1643

Query: 450  GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQS 509
             S+R L  ++   T  E+D      +   R+  +N    GP S        E VP     
Sbjct: 1644 YSMRNL--SRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSPPQEVFVGEAVPTAAPR 1701

Query: 510  LEAIPLGSSAFYLK--WVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLERLP--YISDPT 563
              A+  G++A  L   W  P  E  NG + GYKI +   +  +   + ER+   ++++  
Sbjct: 1702 NVAV-HGATATQLDVTWEPPPLESQNGDIQGYKIYFWEAQAQRRN-VTERVKTLFLAE-- 1757

Query: 564  TTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
                +L  L   T Y + +A +  AGDG  S
Sbjct: 1758 -NGVRLKNLTGYTAYMVSVAAFNAAGDGPRS 1787


>gi|354466537|ref|XP_003495730.1| PREDICTED: protein sidekick-2 isoform 1 [Cricetulus griseus]
          Length = 2172

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 176/606 (29%), Positives = 259/606 (42%), Gaps = 34/606 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V     +V + C+    PL +   IW KDG  +  S+ IS  +Y + L I +   S
Sbjct: 222 KNTSVVAGTSEVTMECVANARPLIKLHIIWRKDGALL--SNGIS--DYNRRLTITNPTLS 277

Query: 98  DQGSYTCEV---SNGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLP 153
           D G Y CE    S+ V      +  LSVL  P F  EPE  I A  E+ V   C+A G+P
Sbjct: 278 DAGYYECEAVLRSSSVSPVTRGAY-LSVLEPPQFVKEPERHITAEMEKVVDIPCRAKGVP 336

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
            P I W  +   +        ++     + I  L   DTG   C A N+ G      Y+ 
Sbjct: 337 PPSITWYKDAALVEVEKLTRFKQRNDGGLQISGLLPDDTGMLQCFAHNAAGEAQTSTYLA 396

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T+LE
Sbjct: 397 VTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLE 456

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+  
Sbjct: 457 SGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMV 516

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C    DP + +  VW +    +  E+ PR     + SL ++++   D G YTCR  +   
Sbjct: 517 CGVTHDPRVTVRYVWEKDGATLAVETNPRIRLDRNGSLHISQTWSGDIGTYTCRVLSAGG 576

Query: 389 FIEAQATLTVQVPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
                A L V+    AP +    +  ++ +   ++W    P         Y ++  +E +
Sbjct: 577 NDSRNAHLRVRQLPHAPEHPVATLSTMERRAINLTW--AKPFDGNSPLMRYILEM-SENN 633

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV 507
              +I    V+  E+T+  V   VPA     R+ A N    G  S+    V+    P T 
Sbjct: 634 APWTILLASVDP-EATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTA 692

Query: 508 QSLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
                I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I+D  
Sbjct: 693 PPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRY-CLAGLPVG---YQFKNITDAD 748

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNL 618
             +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    +    +
Sbjct: 749 VNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTI 808

Query: 619 VISWTA 624
             +W A
Sbjct: 809 RFTWNA 814



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 182/686 (26%), Positives = 272/686 (39%), Gaps = 79/686 (11%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K Q V+  +   +R  ++  F      P PQ  W +DG  I PS RI+      +L+I  
Sbjct: 120 KHQSVSHGEAAVIRAPRISSF------PRPQVTWFRDGRKIPPSSRIAI-TLENTLVILS 172

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFINAAEEET------- 142
               D G Y  + V++  G+ K S  I L+V  +  P   + P  I   +  +       
Sbjct: 173 TVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSE 232

Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
           VT EC A+  P  ++H  W  +G  +S    +  R     R+TI N   SD G Y C A 
Sbjct: 233 VTMECVANARPLIKLHIIWRKDGALLSNGISDYNR-----RLTITNPTLSDAGYYECEAV 287

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+  V +  Y++VL   P+  + P+   T + + VV + CR  G P P + W  + 
Sbjct: 288 LRSSSVSPVTRGAYLSVL-EPPQFVKEPERHITAEMEKVVDIPCRAKGVPPPSITWYKDA 346

Query: 257 -----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HI 310
                ++LT  R+     G L+I+ +   D+G   CFA N  G AQ S  L V     +I
Sbjct: 347 ALVEVEKLT--RFKQRNDGGLQISGLLPDDTGMLQCFAHNAAGEAQTSTYLAVTSIAPNI 404

Query: 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTV 368
           T  P D  V  G S    C     P  + +I W +G   +   S   PRF      SL +
Sbjct: 405 TRGPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTLLESGSLLI 462

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
           + +   D+G YTC A       EA A L V          T I      ++V+     S 
Sbjct: 463 SPTHISDAGTYTCLATNSRGVDEASADLVVWA-------RTRITKPPQDQSVIKGTQASM 515

Query: 429 QSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFA--------RV 480
                H     V+   EKDG      L V        + +  +  S+ ++        RV
Sbjct: 516 VCGVTHDPRVTVRYVWEKDGA----TLAVETNPRIRLDRNGSLHISQTWSGDIGTYTCRV 571

Query: 481 LAFNGAYNGPPSEIISFV--TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
           L+  G  +      +  +   PE    T+ ++E       A  L W KP   N  LM Y 
Sbjct: 572 LSAGGNDSRNAHLRVRQLPHAPEHPVATLSTME-----RRAINLTWAKPFDGNSPLMRYI 626

Query: 539 IKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF 598
           ++  S        LL  +    DP  TS  + GL P+  Y+  L      G G  SK   
Sbjct: 627 LE-MSENNAPWTILLASV----DPEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTE 681

Query: 599 YV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
            V      P   P NV   G T  +++I W   PE   N     Y I +        +  
Sbjct: 682 RVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQF 741

Query: 653 DDVLDWRQSELVLANQPTFQPYEIKV 678
            ++ D   + L+L +   +  YEI+V
Sbjct: 742 KNITDADVNNLLLEDLIIWTNYEIEV 767



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 106/273 (38%), Gaps = 27/273 (9%)

Query: 126 PYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
           PYF  EP       E   +   C A G    E  W+HN + ++       R     R  I
Sbjct: 26  PYFKTEPVRTQVHLEGNRLVLTCMAEGSWPLEFKWLHNNRELT-------RFSLEYRYMI 78

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RVF 243
            +L ++  G Y C   N +G + +      +A+     E  K +    G+  V+   R+ 
Sbjct: 79  TSLDRTHAGFYRCIVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAAVIRAPRIS 138

Query: 244 GAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSGS 301
             P+P+V W  + +++    R  I     L I      D+G Y   A N K G  + S  
Sbjct: 139 SFPRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQP 198

Query: 302 LTVK----------EHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEPI 350
           +T+               I   P++  V AG S  T  C A + P +KL I+W +     
Sbjct: 199 ITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIIWRK----- 253

Query: 351 DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           D       +   +  LT+T  +  D+G Y C A
Sbjct: 254 DGALLSNGISDYNRRLTITNPTLSDAGYYECEA 286



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 74/177 (41%), Gaps = 11/177 (6%)

Query: 422 SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR-- 479
           +WN  SPQ + G  +GYK+  W E   E  +  +        +  V  FV   K F    
Sbjct: 811 TWNAPSPQFINGINQGYKLIAW-EPTQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYF 868

Query: 480 --VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
             VL F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY
Sbjct: 869 TSVLCFTTPGDGPRSSPQLVRTHEDVPGPVGHLSFNDILDTSLKVSWQEPGEKNGILTGY 928

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           +I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 929 RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 980



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ +      G   GYKV+ + EKD +   R  +V  
Sbjct: 1198 VPSSGPTNVSALATTSSS-MLVRWSEIPEADRNGLVLGYKVR-YKEKDSDSQPRFWLVEG 1255

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1256 NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 1315

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P + Y
Sbjct: 1316 SVRLIWQPPAAPNGIILAYQITHRLNATTANTATVEVL----APSARQYMATGLKPESVY 1371

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1372 LFRITAQTRKGWGEAAEAL 1390



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 69/308 (22%), Positives = 128/308 (41%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 958  LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGAPTNLGISN---------- 1003

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +   G I E    L++    N+ ++ + EV    P
Sbjct: 1004 IGPRSVTLQFRPGYDGKTSISRWVVEAQVGVIGEGEEWLLIYQLSNEPDARSMEVPDLNP 1063

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 1064 FTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTA---SETSLWLRWMPL 1120

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY    G   G  L  +  + D       +  LE  T+YR+ + 
Sbjct: 1121 PEMEYNGNPESVGYKIKYSRSDGH--GKTLSHV--VQDRVEREYTIEDLEEWTEYRVQVQ 1176

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S+ +       VP   P NV    +T +++++ W+ +PE + N     Y+
Sbjct: 1177 AFNAIGSGPWSQAVMGRTRESVPSSGPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYK 1236

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1237 VRYKEKDS 1244



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N   I    A +  V+W P    S  G  +GYK+  W  +    + R   +  
Sbjct: 1622 VPTAAPQNVA-IHSATATQLDVTWEPPPLDSQNGDIQGYKIYFWEVQRRNLTERVKTLFL 1680

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E++  ++      +     + AFN A +GP S      T +  P    S++   L +++
Sbjct: 1681 AENSV-KLKNLTGYTAYMVSIAAFNAAGDGPRSTPTRGQTQQAAPSAPGSVKFSELTTTS 1739

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNG L GY++ Y+
Sbjct: 1740 VNVSWEAPQFPNGPLEGYRLVYE 1762



 Score = 39.7 bits (91), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 84/221 (38%), Gaps = 36/221 (16%)

Query: 401  PLEAPSNFTLIQVI--DAKKAVVSWNPVSPQSLRGHFRGYKVQ----------------- 441
            P EAP   T++ V        ++ W P +   + G   G++++                 
Sbjct: 1501 PDEAP---TILSVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGI 1557

Query: 442  -----TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS 496
                  W E     S+R L   +   T  E+D      +   R+  +N    GP S    
Sbjct: 1558 NNPGAKWAELTSLYSMRNL--TRPSLTQYELDNLSKHKRYEIRMSVYNAVGEGPLSPPQE 1615

Query: 497  FVTPEGVPGTV-QSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLL 553
                E VP    Q++      ++   + W  P  +  NG + GYKI +  V+   +   +
Sbjct: 1616 VFVGEAVPTAAPQNVAIHSATATQLDVTWEPPPLDSQNGDIQGYKIYFWEVQRRNLTERV 1675

Query: 554  ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            + L ++++    S KL  L   T Y + +A +  AGDG  S
Sbjct: 1676 KTL-FLAE---NSVKLKNLTGYTAYMVSIAAFNAAGDGPRS 1712


>gi|301616394|ref|XP_002937635.1| PREDICTED: protein sidekick-2-like [Xenopus (Silurana) tropicalis]
          Length = 2174

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 176/593 (29%), Positives = 264/593 (44%), Gaps = 32/593 (5%)

Query: 50  KVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           +V + C+    PL +   +W K+GVP+  S+ +++  +G+ L I +   SD G Y+CE +
Sbjct: 235 EVSMECVANARPLTKLNIVWKKNGVPL--SNGVTE--FGRFLTILNPVLSDAGYYSCEAT 290

Query: 108 NGVGEAKSYSID--LSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPEPEIHWVHNGK 164
                    S    L+VL  P F  EP+  + A  E+ V   C+A G+P+P I W  +  
Sbjct: 291 LRSSSVPPVSAGAYLTVLEPPQFVKEPDRHLTAEMEKVVEIPCQAKGVPQPIISWYKDAV 350

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            I        R V    + I  L   DTG + C A N  G V    Y+ V + AP IT A
Sbjct: 351 LIDIRRDARFRLVSSGSLRISGLIPDDTGMFQCFARNEAGEVQTSTYLAVTSIAPNITRA 410

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDVAF 279
           P+D   +DG  VVL C   GAP+P + W    + L  G     R+T+LE+G L I+    
Sbjct: 411 PQDTTVIDGTAVVLQCETSGAPRPAITWQKGDRVLASGSIQLPRFTLLESGSLLISPAHI 470

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           +D+G YTC A N  G    S  + V   T IT+ P D  V  G  A+  C    D S+ +
Sbjct: 471 SDTGTYTCSATNSRGADDASADIIVWARTRITNPPSDQSVIKGTKASMSCGVSHDSSVAI 530

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
             VW +   P+  E+ PR     + +L ++++   D G YTCR  +        A L V+
Sbjct: 531 RYVWEKDGFPVSVENSPRIQLDKNGTLHISQTWSGDIGTYTCRVLSVGGNDSRSAHLRVR 590

Query: 400 VPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVN 458
               AP N    + +++++   ++W  V P         Y V+  +E +   +I  L   
Sbjct: 591 QLPHAPENPVATLSLVESRAINLTW--VKPFDGNSPLLRYIVEV-SENNAPWTIL-LGSL 646

Query: 459 KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT-PEGVPGT-VQSLEAIPLG 516
             E T   V   VPA     R+ A N    G  S+    V+ PE  P    Q++ A    
Sbjct: 647 DPEQTALVVRNLVPARSYQFRLCAANDVGKGQFSKDTQRVSLPEEPPSAPPQNVMASGRT 706

Query: 517 SSAFYLKWV-KPE-QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
           + +  ++W   PE   NG+L GY ++Y  + G  VG     L   S+P+     L  L  
Sbjct: 707 NQSIMIQWQPAPENHQNGILKGYVVRY-CLSGLPVGYQYRNL---SNPSINHLLLEDLII 762

Query: 575 STKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLVISW 622
            T Y I +A +  AG G  S       L  VP   P+NV+        +  +W
Sbjct: 763 WTNYEIEVAAFNSAGVGVFSGKVTEWTLQGVPTVPPENVKTEAVNSTAIRFTW 815



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 165/658 (25%), Positives = 261/658 (39%), Gaps = 71/658 (10%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK-SYSID 119
           P PQ  W +DG  I P++RI+       +I+  V       Y   V++  G+ K S  I 
Sbjct: 144 PQPQVTWFRDGRKIPPTNRIAITKNNTLVILSSVAPDTGRYYVQAVNDKNGDNKTSQPIT 203

Query: 120 LSV-----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--WVHNGKPI 166
           L+V                       +    E  V+ EC A+  P  +++  W  NG P+
Sbjct: 204 LTVENVGGPADPIAPIIIIPPQNTSVVTGTSE--VSMECVANARPLTKLNIVWKKNGVPL 261

Query: 167 SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT---NSLGYVYKDVYVNVLAHAPEITE 223
           S    N   + G   +TI N   SD G Y C AT   +S+  V    Y+ VL   P+  +
Sbjct: 262 S----NGVTEFG-RFLTILNPVLSDAGYYSCEATLRSSSVPPVSAGAYLTVL-EPPQFVK 315

Query: 224 APKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQKELT---GGRYTILETGDLKITDVAF 279
            P    T + + VV + C+  G P+P ++W  +   +      R+ ++ +G L+I+ +  
Sbjct: 316 EPDRHLTAEMEKVVEIPCQAKGVPQPIISWYKDAVLIDIRRDARFRLVSSGSLRISGLIP 375

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKE-HTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            D+G + CFARN+ G  Q S  L V     +IT  P+D  V  G +   +C     P  +
Sbjct: 376 DDTGMFQCFARNEAGEVQTSTYLAVTSIAPNITRAPQDTTVIDGTAVVLQCETSGAP--R 433

Query: 339 LSIVWLRGSEPIDFES--EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            +I W +G   +   S   PRF      SL ++ +   D+G YTC A       +A A +
Sbjct: 434 PAITWQKGDRVLASGSIQLPRFTLLESGSLLISPAHISDTGTYTCSATNSRGADDASADI 493

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG-----EGS 451
            V       +  +   VI   KA +S           H     ++   EKDG     E S
Sbjct: 494 IVWARTRITNPPSDQSVIKGTKASMSCG-------VSHDSSVAIRYVWEKDGFPVSVENS 546

Query: 452 IRELIVNKG-----ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGT 506
            R  +   G     ++ + ++  +        RVL+  G  +   + +     P      
Sbjct: 547 PRIQLDKNGTLHISQTWSGDIGTYT------CRVLSV-GGNDSRSAHLRVRQLPHAPENP 599

Query: 507 VQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
           V +L  +   S A  L WVKP   N  L+ Y ++  S        LL  L    DP  T+
Sbjct: 600 VATLSLV--ESRAINLTWVKPFDGNSPLLRYIVEV-SENNAPWTILLGSL----DPEQTA 652

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV------PFKNPDNVEGRGSTPNNLVI 620
             +  L P+  Y+  L      G G  SK    V      P   P NV   G T  +++I
Sbjct: 653 LVVRNLVPARSYQFRLCAANDVGKGQFSKDTQRVSLPEEPPSAPPQNVMASGRTNQSIMI 712

Query: 621 SWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            W   PE   N     Y + +        +   ++ +   + L+L +   +  YEI+V
Sbjct: 713 QWQPAPENHQNGILKGYVVRYCLSGLPVGYQYRNLSNPSINHLLLEDLIIWTNYEIEV 770



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 146/588 (24%), Positives = 221/588 (37%), Gaps = 70/588 (11%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNY--GKSLIIKHVEFSDQGSYTCEVS 107
           V L C   G P P   W K D V  + S ++ +       SL+I     SD G+YTC  +
Sbjct: 422 VVLQCETSGAPRPAITWQKGDRVLASGSIQLPRFTLLESGSLLISPAHISDTGTYTCSAT 481

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--WVHNGKP 165
           N  G A   S D+ V A    T  P   +  +    +  C  S      I   W  +G P
Sbjct: 482 NSRG-ADDASADIIVWARTRITNPPSDQSVIKGTKASMSCGVSHDSSVAIRYVWEKDGFP 540

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAPEIT 222
           +S    +PR ++  N  + I      D G Y C   +  G   +  ++ V  L HAPE  
Sbjct: 541 VS-VENSPRIQLDKNGTLHISQTWSGDIGTYTCRVLSVGGNDSRSAHLRVRQLPHAPENP 599

Query: 223 EAPKDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTIL------ETGDLKIT 275
            A      V+ + + LT  + F    P + +I    E     +TIL      E   L + 
Sbjct: 600 VATLS--LVESRAINLTWVKPFDGNSPLLRYIVEVSE-NNAPWTILLGSLDPEQTALVVR 656

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS--ATFRCNAVS 333
           ++  A S ++   A N +G  Q S      + T     PE+      Q+  A+ R N   
Sbjct: 657 NLVPARSYQFRLCAANDVGKGQFS------KDTQRVSLPEEPPSAPPQNVMASGRTNQ-- 708

Query: 334 DPSLKLSIVWLRGSE-------------------PIDFE----SEPRFVQSNDYSLTVTK 370
                + I W    E                   P+ ++    S P         L +  
Sbjct: 709 ----SIMIQWQPAPENHQNGILKGYVVRYCLSGLPVGYQYRNLSNPSINHLLLEDLIIWT 764

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQS 430
           + E++   +             + TL   VP   P N    + +++     +WNP SPQ 
Sbjct: 765 NYEIEVAAFNSAGVGVFSGKVTEWTLQ-GVPTVPPENVK-TEAVNSTAIRFTWNPPSPQF 822

Query: 431 LRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR----VLAFNGA 486
           + G  +GYK+  W E   E  I  + V       T V   +   K F      +L F   
Sbjct: 823 VNGINQGYKLMVW-EPGQEDEIMVITVRPKFQENTHVG-IISGLKKFTSYITSILCFTTP 880

Query: 487 YNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKG 546
            +GP S+     T E VPG V  L    +  ++  + W +P + NG+L GYKI ++    
Sbjct: 881 GDGPRSQPQLVWTQEDVPGPVGHLSFDDILDTSLRVTWQEPAEKNGLLTGYKISWEEFNQ 940

Query: 547 TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           T       R+ +     T   ++ GL   T Y I +AG T  G G  S
Sbjct: 941 TNT-----RVTHYLPNVTLEYRVTGLTSLTTYTIQVAGMTSKGQGVVS 983



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 129/298 (43%), Gaps = 42/298 (14%)

Query: 379  YTCRAQTELDFIEAQATLTVQVPL----EAPSNFTLIQV-IDAKKAVVSWNP----VSPQ 429
            +   AQT   + EA   L V        + PS  T++Q  + A+  ++SW+P    +SP 
Sbjct: 1376 FRITAQTRKGWGEAAEALVVTTEKRDRPQPPSKPTVLQEDVKARTVLLSWDPGSDGLSP- 1434

Query: 430  SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
                  R Y +QT     G+  +    ++   ST+  VD+  P +    RV A N   + 
Sbjct: 1435 -----VRYYTIQTLELPKGKWVVHSATISHN-STSAVVDRLKPFTSYKFRVKATNDIGDS 1488

Query: 490  PPSEII-SFVTPEGVPGTVQSLEAI-PLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVK 545
              SE   +  T +  PG   ++ ++ P  +++  ++W  P  ++ NG+L+G+ I+++ + 
Sbjct: 1489 EYSEESEALTTLQAAPGEAPTILSVNPHTTTSVLIRWQAPAEDRINGILLGFCIRFRELA 1548

Query: 546  ---------------GTKVGPLLE--RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
                           G K   L     +  +S+PT T  +L  L    +Y I ++ Y  A
Sbjct: 1549 YDGLRSFTMQSINNPGAKWAELTASYMMRNLSEPTLTQYELDNLNKHKRYEIRVSMYNAA 1608

Query: 589  GDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            G+G  S  + +F    VP   P N+    +T   L ++W   P    N     Y+IF+
Sbjct: 1609 GEGPSSIPQEVFVGEAVPTAPPQNIAIASTTAVQLDVTWEPPPLEAQNGDIQGYKIFY 1666



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 80/378 (21%), Positives = 145/378 (38%), Gaps = 34/378 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQG 100
           + +V L   ++ L C+  G+   +  W +D         +++ +     +I  ++ +  G
Sbjct: 37  RSQVHLEGNRLVLTCMAEGSWPLEFKWLRD------HKELTKFSLEYRYMITSLDRTHAG 90

Query: 101 SYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC-KASGLPEPEIHW 159
            Y C V N +G       ++ V     F      ++ +  +         +  P+P++ W
Sbjct: 91  YYCCIVRNRMGALLQRKTEVQVAYMGNFEDGDTSLSVSHGDAAVINAPNIASFPQPQVTW 150

Query: 160 VHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNS----------LGYVYK 208
             +G+ I   PP  R  +  N  + I +    DTG Y   A N           +    +
Sbjct: 151 FRDGRKI---PPTNRIAITKNNTLVILSSVAPDTGRYYVQAVNDKNGDNKTSQPITLTVE 207

Query: 209 DVYVNVLAHAPEITEAPKDEYTVDGKT-VVLTCRVFGAPKPEVN--WIHNQKELTGGRYT 265
           +V       AP I   P++   V G + V + C     P  ++N  W  N   L+ G   
Sbjct: 208 NVGGPADPIAPIIIIPPQNTSVVTGTSEVSMECVANARPLTKLNIVWKKNGVPLSNG--- 264

Query: 266 ILETGD-LKITDVAFADSGEYTCFA---RNKLGTAQGSGSLTVKEHTHITDQPEDY-EVE 320
           + E G  L I +   +D+G Y+C A    + +        LTV E      +P+ +   E
Sbjct: 265 VTEFGRFLTILNPVLSDAGYYSCEATLRSSSVPPVSAGAYLTVLEPPQFVKEPDRHLTAE 324

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
             +     C A   P   +S  W + +  ID   + RF   +  SL ++     D+G + 
Sbjct: 325 MEKVVEIPCQAKGVPQPIIS--WYKDAVLIDIRRDARFRLVSSGSLRISGLIPDDTGMFQ 382

Query: 381 CRAQTELDFIEAQATLTV 398
           C A+ E   ++    L V
Sbjct: 383 CFARNEAGEVQTSTYLAV 400



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 90/219 (41%), Gaps = 9/219 (4%)

Query: 326  TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            +F   ++++P  K +   L  S  +   SEP   Q    +L   K  E+    Y    + 
Sbjct: 1554 SFTMQSINNPGAKWAE--LTASYMMRNLSEPTLTQYELDNLNKHKRYEIRVSMYNAAGEG 1611

Query: 386  ELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW-- 443
                I  +  +   VP   P N   I    A +  V+W P   ++  G  +GYK+  W  
Sbjct: 1612 P-SSIPQEVFVGEAVPTAPPQNIA-IASTTAVQLDVTWEPPPLEAQNGDIQGYKIFYWEI 1669

Query: 444  TEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGV 503
              K+    +R L + +   T  ++      +     V AFN A +GP  + I   T +  
Sbjct: 1670 LRKNETEKVRTLFLPE---TGVKLKNLTGYTTYLISVAAFNAAGDGPRGQPIRGQTQQAA 1726

Query: 504  PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
            P    S+    L +++  + W  P  PNG+L GY++ Y+
Sbjct: 1727 PSAPASIRFSELTTTSVNVSWDAPIYPNGILEGYRLVYE 1765



 Score = 47.4 bits (111), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 10/164 (6%)

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
           TE  + +  ++G  +VLTC   G+   E  W+ + KELT  ++++       IT +    
Sbjct: 33  TEPVRSQVHLEGNRLVLTCMAEGSWPLEFKWLRDHKELT--KFSL--EYRYMITSLDRTH 88

Query: 282 SGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC-NAVSDPSLKL 339
           +G Y C  RN++G   Q    + V    +  D      V  G +A     N  S P  + 
Sbjct: 89  AGYYCCIVRNRMGALLQRKTEVQVAYMGNFEDGDTSLSVSHGDAAVINAPNIASFP--QP 146

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            + W R    I   +  R   + + +L +  S   D+G+Y  +A
Sbjct: 147 QVTWFRDGRKIPPTN--RIAITKNNTLVILSSVAPDTGRYYVQA 188



 Score = 46.6 bits (109), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 98/236 (41%), Gaps = 45/236 (19%)

Query: 447  DGEGSIRELIVNKGESTTTEVDKFVP----ASKNFARVLAFNGAYNGPPSEIISF----- 497
            DG+ SI + +V       TE D +V     A++  AR L  +G     P    SF     
Sbjct: 1021 DGKTSISKWLVEAQVGNPTESDDWVLIYQLANEPNARSLGVSGLR---PYNYYSFRMRQV 1077

Query: 498  ----VTPEGVPGT-VQSLEAIP-----------LGSSAFYLKWVK-PEQ-----PNGVLM 535
                 +P  +P   +Q+L+A P              ++ +++WV  PE      P+ V  
Sbjct: 1078 NIVGTSPPSLPSRRIQTLQAPPSMFPANETLRTASQTSLWVRWVPLPEMEYNGNPDSV-- 1135

Query: 536  GYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK 595
            GYKI+Y  +   K G     + Y  D       +  LE  T+Y + +  +   G G  S 
Sbjct: 1136 GYKIRYARLD--KKGKPFTHVIY--DRIEREYTIEDLEEWTEYAVQIQAFNAIGAGPWSP 1191

Query: 596  YLFY-----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
             +       VP   P NV    +T +++++ W+ +PE E N     Y++ ++  ++
Sbjct: 1192 VITARTRESVPSSGPTNVSALATTSSSILVRWSEIPEPERNGLILGYKVLYKEKDS 1247



 Score = 46.2 bits (108), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ +      G   GYKV  + EKD + S    +V  
Sbjct: 1201 VPSSGPTNVSALATT-SSSILVRWSEIPEPERNGLILGYKV-LYKEKDSDTSTHFWLVEG 1258

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-IISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G  S   I   T + VPG    +    + ++
Sbjct: 1259 NSSRSAQLSGLGKYVLYEIQVLAFTRIGDGAASTPAILERTLDDVPGPPVGILFPEVRTT 1318

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++          +E L    +P+        L P + Y
Sbjct: 1319 SVRLIWQPPAAPNGIILAYQITHRLNATNANTATVEVL----NPSVRQYTATALRPESIY 1374

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1375 LFRITAQTRKGWGEAAEAL 1393


>gi|444727882|gb|ELW68360.1| Protein sidekick-2 [Tupaia chinensis]
          Length = 2167

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 174/606 (28%), Positives = 260/606 (42%), Gaps = 34/606 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V     +V + C+    PL +   +W KDG  ++        ++ + L I +   S
Sbjct: 220 KNTSVVAGTSEVTMECVANARPLIKLHIVWKKDGALVSGG----MSDFNRRLTIPNPTSS 275

Query: 98  DQGSYTCEV---SNGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLP 153
           D G Y CE    S+ V      +  LSVL  P F  EPE  I A  E+ V   C+A G+P
Sbjct: 276 DAGYYECEAVLRSSSVAPVVRGAY-LSVLEPPQFVKEPERHITAEMEKVVDIPCRAKGVP 334

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
            P I W  +   +        R+ G   + I  L   DTG + C A N+ G V    Y+ 
Sbjct: 335 PPSITWYKDAAVVEVEKLTRFRQRGDGGLQISGLVPDDTGMFQCFARNTAGEVQTSTYLA 394

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T+LE
Sbjct: 395 VTSIAPNITRGPLDSTVIDGMSVVLVCETSGAPRPAITWQKGERILASGSVQLPRFTLLE 454

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L ++    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+  
Sbjct: 455 SGSLLVSPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITRPPQDQNVIKGTQASMV 514

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A  DP + +  VW +    +  +S PR     + SL ++++   D G YTCR  +   
Sbjct: 515 CGATHDPRVTVRYVWEKDGATLGVDSNPRIRLDKNGSLHISQTWSGDIGTYTCRVLSAGG 574

Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV-VSWNPVSPQSLRGHFRGYKVQTWTEKD 447
                A L V+    AP +         ++A+ ++W    P         Y ++  +E +
Sbjct: 575 NDSRSAHLRVRQLPHAPEHPVATLSTTERRAINLTW--AKPFDGNSPLIRYILEM-SENN 631

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV 507
              ++    V+  E+T+  V   VPA     R+ A N    G  S+    V+    P T 
Sbjct: 632 APWTVLLASVDP-EATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTA 690

Query: 508 QSLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
                I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I+D  
Sbjct: 691 PPQNVIASGRTNQSIMIQWQPPPESHQNGLLKGYIIRY-CLAGLPVG---YQFKNITDAD 746

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNL 618
             +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    +    +
Sbjct: 747 VNNLLLEDLIIWTNYEIEVAAYNGAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTI 806

Query: 619 VISWTA 624
             +W A
Sbjct: 807 RFTWNA 812



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 181/686 (26%), Positives = 271/686 (39%), Gaps = 79/686 (11%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K Q V+  +   +R  ++  F      P PQ  W ++G  I PS RI+       L+I  
Sbjct: 118 KHQSVSHGEAAVIRAPRIASF------PRPQVTWFREGRKIPPSSRIAI-TLENPLVILS 170

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFINAAEEET------- 142
               D G Y  + V++  G+ K S  I L+V  +  P   + P  I   +  +       
Sbjct: 171 TVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSE 230

Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
           VT EC A+  P  ++H  W  +G  +S    +  R     R+TI N   SD G Y C A 
Sbjct: 231 VTMECVANARPLIKLHIVWKKDGALVSGGMSDFNR-----RLTIPNPTSSDAGYYECEAV 285

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+  V +  Y++VL   P+  + P+   T + + VV + CR  G P P + W  + 
Sbjct: 286 LRSSSVAPVVRGAYLSVL-EPPQFVKEPERHITAEMEKVVDIPCRAKGVPPPSITWYKDA 344

Query: 257 -----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHI 310
                ++LT  R+     G L+I+ +   D+G + CFARN  G  Q S  L V     +I
Sbjct: 345 AVVEVEKLT--RFRQRGDGGLQISGLVPDDTGMFQCFARNTAGEVQTSTYLAVTSIAPNI 402

Query: 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTV 368
           T  P D  V  G S    C     P  + +I W +G   +   S   PRF      SL V
Sbjct: 403 TRGPLDSTVIDGMSVVLVCETSGAP--RPAITWQKGERILASGSVQLPRFTLLESGSLLV 460

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
           + +   D+G YTC A       EA A L V          T I      + V+     S 
Sbjct: 461 SPTHISDAGTYTCLATNSRGVDEASADLVVWA-------RTRITRPPQDQNVIKGTQASM 513

Query: 429 QSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFA--------RV 480
                H     V+   EKDG      L V+       + +  +  S+ ++        RV
Sbjct: 514 VCGATHDPRVTVRYVWEKDGA----TLGVDSNPRIRLDKNGSLHISQTWSGDIGTYTCRV 569

Query: 481 LAFNGAYNGPPSEIISFV--TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
           L+  G  +      +  +   PE    T+ + E       A  L W KP   N  L+ Y 
Sbjct: 570 LSAGGNDSRSAHLRVRQLPHAPEHPVATLSTTE-----RRAINLTWAKPFDGNSPLIRYI 624

Query: 539 IKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF 598
           ++  S        LL  +    DP  TS  + GL P+  Y+  L      G G  SK   
Sbjct: 625 LE-MSENNAPWTVLLASV----DPEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTE 679

Query: 599 YV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
            V      P   P NV   G T  +++I W   PE   N     Y I +        +  
Sbjct: 680 RVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGLLKGYIIRYCLAGLPVGYQF 739

Query: 653 DDVLDWRQSELVLANQPTFQPYEIKV 678
            ++ D   + L+L +   +  YEI+V
Sbjct: 740 KNITDADVNNLLLEDLIIWTNYEIEV 765



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 11/177 (6%)

Query: 422 SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR-- 479
           +WN  SPQ + G  +GYK+  W E + E  +  +        +  V  FV   K F    
Sbjct: 809 TWNAPSPQFINGINQGYKLIAW-EPELEEEVTMVTARPNFQDSVHVG-FVSGLKKFTEYF 866

Query: 480 --VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
             VL F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY
Sbjct: 867 TSVLCFTTPGDGPRSTPQLVRTHEDVPGPVGHLSFNDILDTSLKVSWQEPGEKNGILTGY 926

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           +I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 927 RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 978



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 104/274 (37%), Gaps = 29/274 (10%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           +PYF  EP       E   +   C A G    E  W+HN + +++               
Sbjct: 25  SPYFKTEPVRTQVHLEGNRLVLTCMAEGSWPLEFKWLHNNRELTRF---------SLEYM 75

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RV 242
           I +L ++  G Y C   N +G + +      +A+     E  K +    G+  V+   R+
Sbjct: 76  ITSLDRTHAGFYRCIVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAAVIRAPRI 135

Query: 243 FGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSG 300
              P+P+V W    +++    R  I     L I      D+G Y   A N K G  + S 
Sbjct: 136 ASFPRPQVTWFREGRKIPPSSRIAITLENPLVILSTVAPDAGRYYVQAVNDKNGDNKTSQ 195

Query: 301 SLTVK----------EHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEP 349
            +T+               I   P++  V AG S  T  C A + P +KL IVW +    
Sbjct: 196 PITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIVWKKDGAL 255

Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +        +   +  LT+   +  D+G Y C A
Sbjct: 256 VSGG-----MSDFNRRLTIPNPTSSDAGYYECEA 284



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 127/308 (41%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 956  LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGAPTNLGISN---------- 1001

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE--------LIVNKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +   G I E         + N+ ++ + EV    P
Sbjct: 1002 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVIGEGEEWLLIHQLANEPDARSMEVPDLNP 1061

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 1062 FTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTA---SETSLWLRWMPL 1118

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY    G   G  L  +  + D       +  LE  T+YR+ + 
Sbjct: 1119 PEMEYNGNPESVGYKIKYSRSDGH--GKTLSHV--VQDRVEREYTIEDLEEWTEYRVQVQ 1174

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S+ +       VP   P NV    +T +++++ W+ +PE +HN     Y+
Sbjct: 1175 AFNAIGSGPWSQTVVGRTRESVPSSGPANVSALATTSSSMLVRWSEVPEADHNGLVLGYK 1234

Query: 639  IFWRRHNT 646
            + +R  ++
Sbjct: 1235 VMYREKDS 1242



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N   +    A +  V+W P    S  G  +GYK+  W  +    + R   +  
Sbjct: 1618 VPTAAPRNVA-VHGATATQLDVTWEPPPLDSQNGDIQGYKIYFWEAQRRNLTERVKTLFL 1676

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E+   ++      +     V AFN A +GP S      T +  P    S++   L +++
Sbjct: 1677 AENGV-KLKNLTGYTAYMVSVAAFNAAGDGPRSPPTRGQTQQAAPSAPGSVKFSELTTTS 1735

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNGVL GY++ Y+
Sbjct: 1736 VNVSWEAPQFPNGVLEGYRLVYE 1758



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 27/166 (16%)

Query: 510  LEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSV---------------KGTKVGPL 552
            L   P  +++  ++W  P  ++ NG+L+G++I+Y+ +                G K   L
Sbjct: 1504 LSVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAEL 1563

Query: 553  --LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES--KYLFY---VPFKNP 605
              +  +  +S P+ T  +L  L    +Y I ++ Y   G+G  S  + +F    VP   P
Sbjct: 1564 TSMYSIRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSPPQEVFVGEAVPTAAP 1623

Query: 606  DNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI-FW--RRHNTGE 648
             NV   G+T   L ++W   P    N     Y+I FW  +R N  E
Sbjct: 1624 RNVAVHGATATQLDVTWEPPPLDSQNGDIQGYKIYFWEAQRRNLTE 1669



 Score = 41.6 bits (96), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 81/203 (39%), Gaps = 7/203 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ V      G   GYKV  + EKD +   R  +V  
Sbjct: 1196 VPSSGPANVSALATTSSS-MLVRWSEVPEADHNGLVLGYKVM-YREKDSDSQPRFWLVEG 1253

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1254 NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 1313

Query: 519  AFYLKWVKPEQPNGVLMG-YKIKYQSVKG---TKVGPLLERLPYISDPTTTSAKLAGLEP 574
            +  L W  P  PNG+++    +   SV     T+      RL     P        GL+P
Sbjct: 1314 SVRLIWQPPAAPNGIILAPPPLSAHSVPDYTPTQHHHGQHRLGGGRPPAPRQYTATGLKP 1373

Query: 575  STKYRIHLAGYTKAGDGAESKYL 597
             + Y   +   T+ G G  ++ L
Sbjct: 1374 ESVYLFRITAQTRKGWGEAAEAL 1396


>gi|301755691|ref|XP_002913689.1| PREDICTED: LOW QUALITY PROTEIN: neuronal cell adhesion
           molecule-like [Ailuropoda melanoleuca]
          Length = 1304

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 162/524 (30%), Positives = 240/524 (45%), Gaps = 38/524 (7%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           LR   + L CI  G P P   W K DG +PIN   R    N+ K+L I  V  +D G+Y 
Sbjct: 283 LRGNVLSLECIAEGLPTPIIYWIKEDGTLPIN---RTFYKNFKKTLQIIQVSEADSGNYQ 339

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A  ++I ++V AAPY+ + P+ +  +  E     C+A+G P+P I W+ NG
Sbjct: 340 CIAKNSLG-AIHHTISVTVKAAPYWIMAPQNLVLSPGEDGRLICRANGNPKPRISWLSNG 398

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            PI  AP +P RK+  + I   ++++  +  Y CNA+N  GY+  + +VNVLA  P I  
Sbjct: 399 VPIEIAPDDPSRKIDGDTIIFSSVQERSSVVYQCNASNEYGYLLANAFVNVLAEPPRILT 458

Query: 224 APKDEYTVDG-KTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFA 280
           A    Y V   +  +L C  FG+P P + W    K   L    Y   + G L+I      
Sbjct: 459 AANTLYQVIADRPALLDCAFFGSPLPTIEWFKGAKGNALREDSYVFHKNGSLEIPVAQKD 518

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            +G YTC ARNKLG A+    L +K+ T I  QPE   V+ G + +F C    D +L  +
Sbjct: 519 STGTYTCVARNKLGMAKNEVHLEIKDATRIIKQPEYAVVQRGGTVSFECRVNHDHTLIPT 578

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I WL+ +   +  ++ RF    D+ L V    + D G YTC A T LD + A A L+V  
Sbjct: 579 ITWLKDNG--ELPNDGRFTVDKDH-LVVADVRDDDGGTYTCVANTTLDNVSASAVLSVVA 635

Query: 401 PLEAPS----------NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG 450
           P   P+          +  L   +D K   +SW P +  +       + ++        G
Sbjct: 636 PTPTPAPIYDVPNPPFDLELTDQLD-KSVQLSWTPGNDNN--SPITKFIIEYEDAMHEAG 692

Query: 451 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPG 505
                    G  TT ++ K  P      RV+A N      PSE     +     P+  P 
Sbjct: 693 LWHHQTEVSGMQTTAQL-KLSPYVNYSFRVMAVNSLGRSLPSEASEQYLTKAAEPDTNPT 751

Query: 506 TVQSLEAIPLGSSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
            V+ L + P       + W KP    + NG  + YK+ ++   G
Sbjct: 752 AVEGLGSEP---DNLVITW-KPLNGFESNGPGLQYKVSWRQKDG 791



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 145/597 (24%), Positives = 244/597 (40%), Gaps = 73/597 (12%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
            + ++   L C F G+PLP   W K   G  +     +   N   SL I   +    G+YT
Sbjct: 467  IADRPALLDCAFFGSPLPTIEWFKGAKGNALREDSYVFHKN--GSLEIPVAQKDSTGTYT 524

Query: 104  CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPE--PEIHWVH 161
            C   N +G AK+  + L +  A     +PE+       TV+FEC+ +      P I W+ 
Sbjct: 525  CVARNKLGMAKN-EVHLEIKDATRIIKQPEYAVVQRGGTVSFECRVNHDHTLIPTITWLK 583

Query: 162  NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP-- 219
            +     + P + R  V  + + + ++R  D G Y C A  +L  V     ++V+A  P  
Sbjct: 584  DN---GELPNDGRFTVDKDHLVVADVRDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTP 640

Query: 220  ----EITEAPKDEYTVD--GKTVVLT--------------CRVFGAPKPEVNWIHNQKEL 259
                ++   P D    D   K+V L+                 +     E    H+Q E+
Sbjct: 641  APIYDVPNPPFDLELTDQLDKSVQLSWTPGNDNNSPITKFIIEYEDAMHEAGLWHHQTEV 700

Query: 260  TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTA---QGSGSLTVKEHTHITD---- 312
            +G    +  T  LK++      +  +   A N LG +   + S     K     T+    
Sbjct: 701  SG----MQTTAQLKLSPYV---NYSFRVMAVNSLGRSLPSEASEQYLTKAAEPDTNPTAV 753

Query: 313  -----QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
                 +P++  +       F  N    P L+  + W +     ++ S    V +N     
Sbjct: 754  EGLGSEPDNLVITWKPLNGFESNG---PGLQYKVSWRQKDGDDEWTS---VVVANVSKYI 807

Query: 368  VTKSSELDSGQYTCRAQTELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVSW 423
            V+ +          +A  ++ F    A +       +P+ AP N   + V+++  A V W
Sbjct: 808  VSGTPTFVPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVR-VNVVNSTLAEVHW 866

Query: 424  NPVSPQSLRGHFRGYKVQTWTEKDGEGSIR-----ELIVNKGESTTTEVDKFVPASKNFA 478
            +PV  +S+RGH +GY++  W  +      R     +++  +G  T   +    P S    
Sbjct: 867  DPVPLKSIRGHLQGYRIYYWKAQSSSKRNRRHLEKKILTFQGSKTHGMLPGLEPFSHYTL 926

Query: 479  RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
             V   NG   GP S    F TPEGVP    SL+ +     +  L+W  P +PNG+L  Y 
Sbjct: 927  NVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVNPTLDSLTLEWDPPSRPNGILTEYT 986

Query: 539  IKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
            +KYQ +  T ++GPL++ ++P       T   L  L  ST+Y+ +    T AG G++
Sbjct: 987  LKYQPINSTHELGPLVDLKIP----ANKTRWTLKNLNFSTRYKFYFYAQTAAGSGSQ 1039



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 155/603 (25%), Positives = 243/603 (40%), Gaps = 59/603 (9%)

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEE----TVTFECKASGLPEPEIHWVH 161
           ++  + + + YS   S    P F + PE   + +EE     ++ EC A GLP P I+W+ 
Sbjct: 248 IAANLNDTEFYSAKSSRERPPTF-LTPEGNASHKEELRGNVLSLECIAEGLPTPIIYWIK 306

Query: 162 NGK--PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
                PI++      +K     + I  + ++D+GNY C A NSLG ++  + V V A AP
Sbjct: 307 EDGTLPINRTFYKNFKKT----LQIIQVSEADSGNYQCIAKNSLGAIHHTISVTVKA-AP 361

Query: 220 EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI-TD 276
               AP++     G+   L CR  G PKP ++W+ N    E+     +    GD  I + 
Sbjct: 362 YWIMAPQNLVLSPGEDGRLICRANGNPKPRISWLSNGVPIEIAPDDPSRKIDGDTIIFSS 421

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSD 334
           V    S  Y C A N+ G    +  + V       +T     Y+V A + A   C     
Sbjct: 422 VQERSSVVYQCNASNEYGYLLANAFVNVLAEPPRILTAANTLYQVIADRPALLDCAFFGS 481

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           P    +I W +G++      E  +V   + SL +  + +  +G YTC A+ +L   + + 
Sbjct: 482 P--LPTIEWFKGAKGNALR-EDSYVFHKNGSLEIPVAQKDSTGTYTCVARNKLGMAKNEV 538

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGY-KVQTWTEKDGEGSIR 453
            L ++       + T I        V     VS +    H        TW + +GE    
Sbjct: 539 HLEIK-------DATRIIKQPEYAVVQRGGTVSFECRVNHDHTLIPTITWLKDNGE---- 587

Query: 454 ELIVNKGESTTTEVDKFVPAS-----KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ 508
             + N G  T  + D  V A            +A     N   S ++S V P   P  + 
Sbjct: 588 --LPNDGRFTVDK-DHLVVADVRDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIY 644

Query: 509 SLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
            +   P           +  L W      N  +  + I+Y+         L      +S 
Sbjct: 645 DVPNPPFDLELTDQLDKSVQLSWTPGNDNNSPITKFIIEYED--AMHEAGLWHHQTEVSG 702

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV--PFKNPDNVEGRGSTP 615
             TT A+L  L P   Y   +      G      A  +YL     P  NP  VEG GS P
Sbjct: 703 MQTT-AQLK-LSPYVNYSFRVMAVNSLGRSLPSEASEQYLTKAAEPDTNPTAVEGLGSEP 760

Query: 616 NNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYE 675
           +NLVI+W  +   E N P  +Y++ WR+ +  + W    V+    S+ +++  PTF PY 
Sbjct: 761 DNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS--VVVANVSKYIVSGTPTFVPYL 818

Query: 676 IKV 678
           IKV
Sbjct: 819 IKV 821



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 150/613 (24%), Positives = 237/613 (38%), Gaps = 77/613 (12%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +GVPI     +PS +I     G ++I   V+      Y C  S
Sbjct: 380 LICRANGNPKPRISWLSNGVPIEIAPDDPSRKID----GDTIIFSSVQERSSVVYQCNAS 435

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  G   + +  ++VLA P    T          +     +C   G P P I W    K 
Sbjct: 436 NEYGYLLANAF-VNVLAEPPRILTAANTLYQVIADRPALLDCAFFGSPLPTIEWFKGAKG 494

Query: 166 IS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            + +       K G   I +   +K  TG Y C A N LG    +V++ +   A  I + 
Sbjct: 495 NALREDSYVFHKNGSLEIPVA--QKDSTGTYTCVARNKLGMAKNEVHLEI-KDATRIIKQ 551

Query: 225 PKDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P+      G TV   CRV       P + W+ +  EL   GR+T+ +   L + DV   D
Sbjct: 552 PEYAVVQRGGTVSFECRVNHDHTLIPTITWLKDNGELPNDGRFTV-DKDHLVVADVRDDD 610

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHT-------HITDQPEDYEVEAGQSATFRCNAVSD 334
            G YTC A   L     S  L+V   T        + + P D E+              D
Sbjct: 611 GGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNPPFDLELTDQL----------D 660

Query: 335 PSLKLSIVWLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
            S++LS  W  G++   PI     E E    ++  +      S    + Q          
Sbjct: 661 KSVQLS--WTPGNDNNSPITKFIIEYEDAMHEAGLWHHQTEVSGMQTTAQLKLSPYVNYS 718

Query: 389 F-IEAQATLTVQVPLEAP-----------SNFTLIQVIDAK--KAVVSWNPVSPQSLRGH 434
           F + A  +L   +P EA            +N T ++ + ++    V++W P++     G 
Sbjct: 719 FRVMAVNSLGRSLPSEASEQYLTKAAEPDTNPTAVEGLGSEPDNLVITWKPLNGFESNGP 778

Query: 435 FRGYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
              YKV +W +KDG+     ++V N  +   +    FVP      +V A N     P   
Sbjct: 779 GLQYKV-SWRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPA 834

Query: 494 IISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--K 548
           ++   + E +P     ++    + S+   + W  V  +   G L GY+I Y   + +  +
Sbjct: 835 VVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSSKR 894

Query: 549 VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDN 607
               LE+       + T   L GLEP + Y +++      G+G A    +F  P      
Sbjct: 895 NRRHLEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP------ 948

Query: 608 VEGRGSTPNNLVI 620
            EG  S P++L I
Sbjct: 949 -EGVPSAPSSLKI 960



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 130/315 (41%), Gaps = 49/315 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
           E +  +C+A G P P   W  NG        P    K G   +TI  +   K++T  G Y
Sbjct: 62  ENIVIQCEAKGKPAPSFSWTRNGTHFDIDKDPLVTMKPGSGTLTINIMSEGKAETYEGVY 121

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPE-VNWI 253
            C A N  G    +  V   + +P  T+   +  T+ +G++++L CR      P  + W+
Sbjct: 122 QCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLRNGQSLILPCRPPLGLPPPIIFWM 181

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVKE--- 306
            N  Q+     R +    GDL  ++V   D+ E Y C+AR N   T Q    ++VK    
Sbjct: 182 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISV 241

Query: 307 ---HTHITDQPEDYEVEAGQSATFR--------CNAVSDPSLKLSIV------------- 342
              +  I     D E  + +S+  R         NA     L+ +++             
Sbjct: 242 DELNDTIAANLNDTEFYSAKSSRERPPTFLTPEGNASHKEELRGNVLSLECIAEGLPTPI 301

Query: 343 --WLR--GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             W++  G+ PI+      F ++   +L + + SE DSG Y C A+  L  I    ++TV
Sbjct: 302 IYWIKEDGTLPINR----TFYKNFKKTLQIIQVSEADSGNYQCIAKNSLGAIHHTISVTV 357

Query: 399 QVP---LEAPSNFTL 410
           +     + AP N  L
Sbjct: 358 KAAPYWIMAPQNLVL 372


>gi|354466539|ref|XP_003495731.1| PREDICTED: protein sidekick-2 isoform 2 [Cricetulus griseus]
          Length = 2053

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 176/606 (29%), Positives = 259/606 (42%), Gaps = 34/606 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V     +V + C+    PL +   IW KDG  +  S+ IS  +Y + L I +   S
Sbjct: 126 KNTSVVAGTSEVTMECVANARPLIKLHIIWRKDGALL--SNGIS--DYNRRLTITNPTLS 181

Query: 98  DQGSYTCEV---SNGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLP 153
           D G Y CE    S+ V      +  LSVL  P F  EPE  I A  E+ V   C+A G+P
Sbjct: 182 DAGYYECEAVLRSSSVSPVTRGAY-LSVLEPPQFVKEPERHITAEMEKVVDIPCRAKGVP 240

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
            P I W  +   +        ++     + I  L   DTG   C A N+ G      Y+ 
Sbjct: 241 PPSITWYKDAALVEVEKLTRFKQRNDGGLQISGLLPDDTGMLQCFAHNAAGEAQTSTYLA 300

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T+LE
Sbjct: 301 VTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLE 360

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+  
Sbjct: 361 SGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMV 420

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C    DP + +  VW +    +  E+ PR     + SL ++++   D G YTCR  +   
Sbjct: 421 CGVTHDPRVTVRYVWEKDGATLAVETNPRIRLDRNGSLHISQTWSGDIGTYTCRVLSAGG 480

Query: 389 FIEAQATLTVQVPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
                A L V+    AP +    +  ++ +   ++W    P         Y ++  +E +
Sbjct: 481 NDSRNAHLRVRQLPHAPEHPVATLSTMERRAINLTW--AKPFDGNSPLMRYILEM-SENN 537

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV 507
              +I    V+  E+T+  V   VPA     R+ A N    G  S+    V+    P T 
Sbjct: 538 APWTILLASVDP-EATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTA 596

Query: 508 QSLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
                I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I+D  
Sbjct: 597 PPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRY-CLAGLPVG---YQFKNITDAD 652

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNL 618
             +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    +    +
Sbjct: 653 VNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTI 712

Query: 619 VISWTA 624
             +W A
Sbjct: 713 RFTWNA 718



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 182/686 (26%), Positives = 272/686 (39%), Gaps = 79/686 (11%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K Q V+  +   +R  ++  F      P PQ  W +DG  I PS RI+      +L+I  
Sbjct: 24  KHQSVSHGEAAVIRAPRISSF------PRPQVTWFRDGRKIPPSSRIAI-TLENTLVILS 76

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFINAAEEET------- 142
               D G Y  + V++  G+ K S  I L+V  +  P   + P  I   +  +       
Sbjct: 77  TVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSE 136

Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
           VT EC A+  P  ++H  W  +G  +S    +  R     R+TI N   SD G Y C A 
Sbjct: 137 VTMECVANARPLIKLHIIWRKDGALLSNGISDYNR-----RLTITNPTLSDAGYYECEAV 191

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+  V +  Y++VL   P+  + P+   T + + VV + CR  G P P + W  + 
Sbjct: 192 LRSSSVSPVTRGAYLSVL-EPPQFVKEPERHITAEMEKVVDIPCRAKGVPPPSITWYKDA 250

Query: 257 -----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HI 310
                ++LT  R+     G L+I+ +   D+G   CFA N  G AQ S  L V     +I
Sbjct: 251 ALVEVEKLT--RFKQRNDGGLQISGLLPDDTGMLQCFAHNAAGEAQTSTYLAVTSIAPNI 308

Query: 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTV 368
           T  P D  V  G S    C     P  + +I W +G   +   S   PRF      SL +
Sbjct: 309 TRGPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTLLESGSLLI 366

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
           + +   D+G YTC A       EA A L V          T I      ++V+     S 
Sbjct: 367 SPTHISDAGTYTCLATNSRGVDEASADLVVWA-------RTRITKPPQDQSVIKGTQASM 419

Query: 429 QSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFA--------RV 480
                H     V+   EKDG      L V        + +  +  S+ ++        RV
Sbjct: 420 VCGVTHDPRVTVRYVWEKDGA----TLAVETNPRIRLDRNGSLHISQTWSGDIGTYTCRV 475

Query: 481 LAFNGAYNGPPSEIISFV--TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
           L+  G  +      +  +   PE    T+ ++E       A  L W KP   N  LM Y 
Sbjct: 476 LSAGGNDSRNAHLRVRQLPHAPEHPVATLSTME-----RRAINLTWAKPFDGNSPLMRYI 530

Query: 539 IKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF 598
           ++  S        LL  +    DP  TS  + GL P+  Y+  L      G G  SK   
Sbjct: 531 LE-MSENNAPWTILLASV----DPEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTE 585

Query: 599 YV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
            V      P   P NV   G T  +++I W   PE   N     Y I +        +  
Sbjct: 586 RVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQF 645

Query: 653 DDVLDWRQSELVLANQPTFQPYEIKV 678
            ++ D   + L+L +   +  YEI+V
Sbjct: 646 KNITDADVNNLLLEDLIIWTNYEIEV 671



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 74/177 (41%), Gaps = 11/177 (6%)

Query: 422 SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR-- 479
           +WN  SPQ + G  +GYK+  W E   E  +  +        +  V  FV   K F    
Sbjct: 715 TWNAPSPQFINGINQGYKLIAW-EPTQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYF 772

Query: 480 --VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
             VL F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY
Sbjct: 773 TSVLCFTTPGDGPRSSPQLVRTHEDVPGPVGHLSFNDILDTSLKVSWQEPGEKNGILTGY 832

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           +I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 833 RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 884



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ +      G   GYKV+ + EKD +   R  +V  
Sbjct: 1102 VPSSGPTNVSALATTSSS-MLVRWSEIPEADRNGLVLGYKVR-YKEKDSDSQPRFWLVEG 1159

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1160 NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 1219

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P + Y
Sbjct: 1220 SVRLIWQPPAAPNGIILAYQITHRLNATTANTATVEVL----APSARQYMATGLKPESVY 1275

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1276 LFRITAQTRKGWGEAAEAL 1294



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 69/308 (22%), Positives = 128/308 (41%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 862  LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGAPTNLGISN---------- 907

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +   G I E    L++    N+ ++ + EV    P
Sbjct: 908  IGPRSVTLQFRPGYDGKTSISRWVVEAQVGVIGEGEEWLLIYQLSNEPDARSMEVPDLNP 967

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 968  FTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTA---SETSLWLRWMPL 1024

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY    G   G  L  +  + D       +  LE  T+YR+ + 
Sbjct: 1025 PEMEYNGNPESVGYKIKYSRSDGH--GKTLSHV--VQDRVEREYTIEDLEEWTEYRVQVQ 1080

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S+ +       VP   P NV    +T +++++ W+ +PE + N     Y+
Sbjct: 1081 AFNAIGSGPWSQAVMGRTRESVPSSGPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYK 1140

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1141 VRYKEKDS 1148



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N   I    A +  V+W P    S  G  +GYK+  W  +    + R   +  
Sbjct: 1507 VPTAAPQNVA-IHSATATQLDVTWEPPPLDSQNGDIQGYKIYFWEVQRRNLTERVKTLFL 1565

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E++  ++      +     + AFN A +GP S      T +  P    S++   L +++
Sbjct: 1566 AENSV-KLKNLTGYTAYMVSIAAFNAAGDGPRSTPTRGQTQQAAPSAPGSVKFSELTTTS 1624

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNG L GY++ Y+
Sbjct: 1625 VNVSWEAPQFPNGPLEGYRLVYE 1647


>gi|344236284|gb|EGV92387.1| Protein sidekick-2 [Cricetulus griseus]
          Length = 2103

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 176/606 (29%), Positives = 259/606 (42%), Gaps = 34/606 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V     +V + C+    PL +   IW KDG  +  S+ IS  +Y + L I +   S
Sbjct: 153 KNTSVVAGTSEVTMECVANARPLIKLHIIWRKDGALL--SNGIS--DYNRRLTITNPTLS 208

Query: 98  DQGSYTCEV---SNGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLP 153
           D G Y CE    S+ V      +  LSVL  P F  EPE  I A  E+ V   C+A G+P
Sbjct: 209 DAGYYECEAVLRSSSVSPVTRGAY-LSVLEPPQFVKEPERHITAEMEKVVDIPCRAKGVP 267

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
            P I W  +   +        ++     + I  L   DTG   C A N+ G      Y+ 
Sbjct: 268 PPSITWYKDAALVEVEKLTRFKQRNDGGLQISGLLPDDTGMLQCFAHNAAGEAQTSTYLA 327

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T+LE
Sbjct: 328 VTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLE 387

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+  
Sbjct: 388 SGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMV 447

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C    DP + +  VW +    +  E+ PR     + SL ++++   D G YTCR  +   
Sbjct: 448 CGVTHDPRVTVRYVWEKDGATLAVETNPRIRLDRNGSLHISQTWSGDIGTYTCRVLSAGG 507

Query: 389 FIEAQATLTVQVPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
                A L V+    AP +    +  ++ +   ++W    P         Y ++  +E +
Sbjct: 508 NDSRNAHLRVRQLPHAPEHPVATLSTMERRAINLTW--AKPFDGNSPLMRYILEM-SENN 564

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV 507
              +I    V+  E+T+  V   VPA     R+ A N    G  S+    V+    P T 
Sbjct: 565 APWTILLASVDP-EATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTA 623

Query: 508 QSLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
                I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I+D  
Sbjct: 624 PPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRY-CLAGLPVG---YQFKNITDAD 679

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNL 618
             +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    +    +
Sbjct: 680 VNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTI 739

Query: 619 VISWTA 624
             +W A
Sbjct: 740 RFTWNA 745



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 182/686 (26%), Positives = 272/686 (39%), Gaps = 79/686 (11%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K Q V+  +   +R  ++  F      P PQ  W +DG  I PS RI+      +L+I  
Sbjct: 51  KHQSVSHGEAAVIRAPRISSF------PRPQVTWFRDGRKIPPSSRIAI-TLENTLVILS 103

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFINAAEEET------- 142
               D G Y  + V++  G+ K S  I L+V  +  P   + P  I   +  +       
Sbjct: 104 TVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSE 163

Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
           VT EC A+  P  ++H  W  +G  +S    +  R     R+TI N   SD G Y C A 
Sbjct: 164 VTMECVANARPLIKLHIIWRKDGALLSNGISDYNR-----RLTITNPTLSDAGYYECEAV 218

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+  V +  Y++VL   P+  + P+   T + + VV + CR  G P P + W  + 
Sbjct: 219 LRSSSVSPVTRGAYLSVL-EPPQFVKEPERHITAEMEKVVDIPCRAKGVPPPSITWYKDA 277

Query: 257 -----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHI 310
                ++LT  R+     G L+I+ +   D+G   CFA N  G AQ S  L V     +I
Sbjct: 278 ALVEVEKLT--RFKQRNDGGLQISGLLPDDTGMLQCFAHNAAGEAQTSTYLAVTSIAPNI 335

Query: 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTV 368
           T  P D  V  G S    C     P  + +I W +G   +   S   PRF      SL +
Sbjct: 336 TRGPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTLLESGSLLI 393

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
           + +   D+G YTC A       EA A L V          T I      ++V+     S 
Sbjct: 394 SPTHISDAGTYTCLATNSRGVDEASADLVVWA-------RTRITKPPQDQSVIKGTQASM 446

Query: 429 QSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFA--------RV 480
                H     V+   EKDG      L V        + +  +  S+ ++        RV
Sbjct: 447 VCGVTHDPRVTVRYVWEKDGA----TLAVETNPRIRLDRNGSLHISQTWSGDIGTYTCRV 502

Query: 481 LAFNGAYNGPPSEIISFV--TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
           L+  G  +      +  +   PE    T+ ++E       A  L W KP   N  LM Y 
Sbjct: 503 LSAGGNDSRNAHLRVRQLPHAPEHPVATLSTME-----RRAINLTWAKPFDGNSPLMRYI 557

Query: 539 IKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF 598
           ++  S        LL  +    DP  TS  + GL P+  Y+  L      G G  SK   
Sbjct: 558 LE-MSENNAPWTILLASV----DPEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTE 612

Query: 599 YV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
            V      P   P NV   G T  +++I W   PE   N     Y I +        +  
Sbjct: 613 RVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQF 672

Query: 653 DDVLDWRQSELVLANQPTFQPYEIKV 678
            ++ D   + L+L +   +  YEI+V
Sbjct: 673 KNITDADVNNLLLEDLIIWTNYEIEV 698



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 74/177 (41%), Gaps = 11/177 (6%)

Query: 422 SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR-- 479
           +WN  SPQ + G  +GYK+  W E   E  +  +        +  V  FV   K F    
Sbjct: 742 TWNAPSPQFINGINQGYKLIAW-EPTQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYF 799

Query: 480 --VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
             VL F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY
Sbjct: 800 TSVLCFTTPGDGPRSSPQLVRTHEDVPGPVGHLSFNDILDTSLKVSWQEPGEKNGILTGY 859

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           +I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 860 RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 911



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ +      G   GYKV+ + EKD +   R  +V  
Sbjct: 1129 VPSSGPTNVSALATTSSS-MLVRWSEIPEADRNGLVLGYKVR-YKEKDSDSQPRFWLVEG 1186

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1187 NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 1246

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P + Y
Sbjct: 1247 SVRLIWQPPAAPNGIILAYQITHRLNATTANTATVEVL----APSARQYMATGLKPESVY 1302

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1303 LFRITAQTRKGWGEAAEAL 1321



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 69/308 (22%), Positives = 128/308 (41%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 889  LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGAPTNLGISN---------- 934

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +   G I E    L++    N+ ++ + EV    P
Sbjct: 935  IGPRSVTLQFRPGYDGKTSISRWVVEAQVGVIGEGEEWLLIYQLSNEPDARSMEVPDLNP 994

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 995  FTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTA---SETSLWLRWMPL 1051

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY    G   G  L  +  + D       +  LE  T+YR+ + 
Sbjct: 1052 PEMEYNGNPESVGYKIKYSRSDGH--GKTLSHV--VQDRVEREYTIEDLEEWTEYRVQVQ 1107

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S+ +       VP   P NV    +T +++++ W+ +PE + N     Y+
Sbjct: 1108 AFNAIGSGPWSQAVMGRTRESVPSSGPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYK 1167

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1168 VRYKEKDS 1175



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N   I    A +  V+W P    S  G  +GYK+  W  +    + R   +  
Sbjct: 1553 VPTAAPQNVA-IHSATATQLDVTWEPPPLDSQNGDIQGYKIYFWEVQRRNLTERVKTLFL 1611

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E++  ++      +     + AFN A +GP S      T +  P    S++   L +++
Sbjct: 1612 AENSV-KLKNLTGYTAYMVSIAAFNAAGDGPRSTPTRGQTQQAAPSAPGSVKFSELTTTS 1670

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNG L GY++ Y+
Sbjct: 1671 VNVSWEAPQFPNGPLEGYRLVYE 1693



 Score = 39.7 bits (91), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 84/221 (38%), Gaps = 36/221 (16%)

Query: 401  PLEAPSNFTLIQVI--DAKKAVVSWNPVSPQSLRGHFRGYKVQ----------------- 441
            P EAP   T++ V        ++ W P +   + G   G++++                 
Sbjct: 1432 PDEAP---TILSVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGI 1488

Query: 442  -----TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS 496
                  W E     S+R L   +   T  E+D      +   R+  +N    GP S    
Sbjct: 1489 NNPGAKWAELTSLYSMRNL--TRPSLTQYELDNLSKHKRYEIRMSVYNAVGEGPLSPPQE 1546

Query: 497  FVTPEGVPGTV-QSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLL 553
                E VP    Q++      ++   + W  P  +  NG + GYKI +  V+   +   +
Sbjct: 1547 VFVGEAVPTAAPQNVAIHSATATQLDVTWEPPPLDSQNGDIQGYKIYFWEVQRRNLTERV 1606

Query: 554  ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            + L ++++    S KL  L   T Y + +A +  AGDG  S
Sbjct: 1607 KTL-FLAE---NSVKLKNLTGYTAYMVSIAAFNAAGDGPRS 1643


>gi|403280637|ref|XP_003931822.1| PREDICTED: protein sidekick-2 [Saimiri boliviensis boliviensis]
          Length = 2172

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 179/605 (29%), Positives = 256/605 (42%), Gaps = 32/605 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V     +V L C+    PL +   IW KDGV +  S  IS  N  + L I +   S
Sbjct: 222 KNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGVLL--SGGISDHN--RRLTIPNPTAS 277

Query: 98  DQGSYTCEVSNGVGEAKSY--SIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPE 154
           D G Y CE         S      LSVL  P F  EPE  I A  E+ V   C+A G+P 
Sbjct: 278 DAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQFVKEPERHITAEMEKVVDIPCRAKGVPP 337

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
           P I W  +   +        R+     + I  L   DTG + C A NS G V    Y+ V
Sbjct: 338 PSISWYKDAAVVEVEKLARFRQRSDGGLQISGLVPDDTGMFQCFARNSAGEVQTSTYLAV 397

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILET 269
            + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T LE+
Sbjct: 398 TSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLES 457

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+  C
Sbjct: 458 GSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVC 517

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
               DP + +  VW +    +  ES PR     + SL ++++   D G YTCR  +    
Sbjct: 518 GVTHDPRVTVRYVWEKDGATLGMESNPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGN 577

Query: 390 IEAQATLTVQVPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
               A L V+    AP +    +  ++ +   ++W    P         Y ++  +E + 
Sbjct: 578 DSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTW--AKPFDGNSPLIRYVLEM-SENNA 634

Query: 449 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ 508
             ++    V+  ++T+  V   VPA     R+ A N    G  S+    V+    P T  
Sbjct: 635 PWTVLLPSVDP-KATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAP 693

Query: 509 SLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT 564
               I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I+D   
Sbjct: 694 PQNVIASGRTNQSIMIQWQPPPESHQNGILKGYVIRY-CLAGLPVG---YQFKNITDADV 749

Query: 565 TSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLV 619
            +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    +    + 
Sbjct: 750 NNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIR 809

Query: 620 ISWTA 624
            +W A
Sbjct: 810 FTWNA 814



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 175/699 (25%), Positives = 262/699 (37%), Gaps = 105/699 (15%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K Q V+  +   +R  ++  F      P PQ  W +DG  I PS RI+      +L+I  
Sbjct: 120 KHQSVSHGEAAVIRAPRIASF------PQPQVTWFRDGRKIPPSSRIAI-TLENTLVILS 172

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV---------LAAPYFTVEPEFINAAEEET 142
               D G Y  + V++  G+ K S  I L+V         +AA            A    
Sbjct: 173 TVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGGPADPIAATIIIPPKNTSVVAGTSE 232

Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
           VT EC A+  P  ++H  W  +G  +S    +  R     R+TI N   SD G Y C A 
Sbjct: 233 VTLECVANARPLIKLHIIWKKDGVLLSGGISDHNR-----RLTIPNPTASDAGYYECEAV 287

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+  V +  Y++VL   P+  + P+   T + + VV + CR  G P P ++W  + 
Sbjct: 288 LRSSSVPSVVRGAYLSVL-EPPQFVKEPERHITAEMEKVVDIPCRAKGVPPPSISWYKDA 346

Query: 257 KEL---TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITD 312
             +      R+     G L+I+ +   D+G + CFARN  G  Q S  L V     +IT 
Sbjct: 347 AVVEVEKLARFRQRSDGGLQISGLVPDDTGMFQCFARNSAGEVQTSTYLAVTSIAPNITR 406

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTK 370
            P D  V  G S    C     P  + +I W +G   +   S   PRF      SL ++ 
Sbjct: 407 GPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTPLESGSLLISP 464

Query: 371 SSELDSGQYTCRAQTELDFIEA-------------------------QATLTVQVPLEAP 405
           +   D+G YTC A       EA                         QA++   V  +  
Sbjct: 465 THISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVCGVTHDPR 524

Query: 406 SNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTT 465
                +   D     +  NP       G    +  QTW+   G  + R +     +S + 
Sbjct: 525 VTVRYVWEKDGATLGMESNPRIRLDRNGSL--HISQTWSGDIGTYTCRVISAGGNDSRSA 582

Query: 466 EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWV 525
            +           RV     A             PE    T+ ++E       A  L W 
Sbjct: 583 HL-----------RVRQLPHA-------------PEHPVATLSTVE-----RRAINLTWA 613

Query: 526 KPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
           KP   N  L+ Y ++          P    LP + DP  TS  + GL P+  Y+  L   
Sbjct: 614 KPFDGNSPLIRYVLEMSENNA----PWTVLLPSV-DPKATSVTVKGLVPARSYQFRLCAV 668

Query: 586 TKAGDGAESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI 639
              G G  SK    V      P   P NV   G T  +++I W   PE   N     Y I
Sbjct: 669 NDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYVI 728

Query: 640 FWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            +        +   ++ D   + L+L +   +  YEI+V
Sbjct: 729 RYCLAGLPVGYQFKNITDADVNNLLLEDLIIWTNYEIEV 767



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 107/274 (39%), Gaps = 27/274 (9%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           +PYF  EP       E   +   C A G    E  W+HN + +++            R  
Sbjct: 25  SPYFKTEPVRTQVHLEGNRLVLTCMAEGSWPLEFKWLHNNRELTKFSLE-------YRYM 77

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RV 242
           I +L ++  G Y C   N +G + +      +A+     E  K +    G+  V+   R+
Sbjct: 78  ITSLDRTHAGFYRCIVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAAVIRAPRI 137

Query: 243 FGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSG 300
              P+P+V W  + +++    R  I     L I      D+G Y   A N K G  + S 
Sbjct: 138 ASFPQPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQ 197

Query: 301 SLTVKEH----------THITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEP 349
            +T+               I   P++  V AG S  T  C A + P +KL I+W +    
Sbjct: 198 PITLAVENVGGPADPIAATIIIPPKNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGVL 257

Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +        +  ++  LT+   +  D+G Y C A
Sbjct: 258 LSGG-----ISDHNRRLTIPNPTASDAGYYECEA 286



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 11/177 (6%)

Query: 422 SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR-- 479
           +WN  SPQ + G  +GYK+  W E + E  +  +        +  V  FV   K F    
Sbjct: 811 TWNAPSPQFINGINQGYKLIAW-EPEQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYF 868

Query: 480 --VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
             VL F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY
Sbjct: 869 TSVLCFTTPGDGPRSTPQLVRTHEDVPGPVGHLSFSDILDTSLKVSWQEPGEKNGILTGY 928

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           +I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 929 RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 980



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 84/199 (42%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ V      G   GYKV  + EKD +   R  +V  
Sbjct: 1198 VPSSGPTNVSALATTSSS-MLVRWSDVPEADRNGLVLGYKVM-YKEKDSDAQPRFWLVEG 1255

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           RVLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1256 NSSRSAQLTGLGKYVLYEVRVLAFTRIGDGRPSHPPILERTLDDVPGPPMGILFPEVRTT 1315

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P + Y
Sbjct: 1316 SVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVL----APSARQYTATGLKPESVY 1371

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1372 LFRITAQTRKGWGEAAEAL 1390



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N  ++    A +  V+W P    S  G  +GYK+  W  +    + R   +  
Sbjct: 1622 VPTAAPRN-VVVHGATATQLDVTWEPPPLDSQNGDIQGYKIYFWEAQRQNLTERVKTLFL 1680

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E++  ++      +     V AFN A +GP S      T +  P    S++   L +++
Sbjct: 1681 AENSV-KLKNLTGYTAYMVSVAAFNAAGDGPRSSPTQGQTQQAAPSAPSSVQFSELTTTS 1739

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNG+L GY++ Y+
Sbjct: 1740 VNVSWEAPQFPNGILEGYRLVYE 1762



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 69/308 (22%), Positives = 128/308 (41%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 958  LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGPPTNLGISN---------- 1003

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +   G + E    L+V    N+ ++ + EV    P
Sbjct: 1004 IGPRSVTLQFRPGYNGKTSISRWLVEAQVGVVGEGEEWLLVHQLSNEPDARSMEVPDLNP 1063

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 1064 FTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTA---SETSLWLRWMPL 1120

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY    G   G  L  +  + D       +  LE  T+YR+ + 
Sbjct: 1121 PEMEYNGNPESVGYKIKYSRSDGH--GKTLSHV--VQDRVEREYTIEDLEEWTEYRVQVQ 1176

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S+ +       VP   P NV    +T +++++ W+ +PE + N     Y+
Sbjct: 1177 AFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSDVPEADRNGLVLGYK 1236

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1237 VMYKEKDS 1244



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 127/313 (40%), Gaps = 49/313 (15%)

Query: 414  IDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDK 469
            + A+  ++SW P    +SP       R Y +QT     G  ++    V+   S+   VD+
Sbjct: 1413 VRARSVLLSWEPGSDGLSP------VRYYTIQTRELPSGRWALHSASVSHNASSFI-VDR 1465

Query: 470  FVPASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKW 524
              P +    RV A N   +   SE    +T     P+  P     L   P  +++  ++W
Sbjct: 1466 LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTI---LSVTPHTTTSVLIRW 1522

Query: 525  VKP--EQPNGVLMGYKIKYQSV--KGTKVGPL---------------LERLPYISDPTTT 565
              P  ++ NGVL+G++I+Y+ +  +G +   L               +  +  +S P+ T
Sbjct: 1523 QPPAEDKINGVLLGFRIRYRELLYEGLRGFTLRGINNPGATWAELTSMYSMRNLSRPSLT 1582

Query: 566  SAKLAGLEPSTKYRIHLAGYTKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVI 620
              +L  L    +Y I ++ Y   G+G  S    +F    VP   P NV   G+T   L +
Sbjct: 1583 QYELDNLNKHRRYEIRMSVYNAVGEGPSSPPHEVFVGEAVPTAAPRNVVVHGATATQLDV 1642

Query: 621  SWTAMPEIEHNAPHFKYRI-FW--RRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIK 677
            +W   P    N     Y+I FW  +R N  E   +   L   ++ + L N   +  Y + 
Sbjct: 1643 TWEPPPLDSQNGDIQGYKIYFWEAQRQNLTE---RVKTLFLAENSVKLKNLTGYTAYMVS 1699

Query: 678  VVQTWTEKDGEGS 690
            V       DG  S
Sbjct: 1700 VAAFNAAGDGPRS 1712



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 85/220 (38%), Gaps = 34/220 (15%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ------------------- 441
            P EAP+  + +        ++ W P +   + G   G++++                   
Sbjct: 1501 PDEAPTILS-VTPHTTTSVLIRWQPPAEDKINGVLLGFRIRYRELLYEGLRGFTLRGINN 1559

Query: 442  ---TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
               TW E     S+R L  ++   T  E+D      +   R+  +N    GP S      
Sbjct: 1560 PGATWAELTSMYSMRNL--SRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSPPHEVF 1617

Query: 499  TPEGVPGTVQSLEAIPLGSSAFYLK--WVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLE 554
              E VP T      +  G++A  L   W  P  +  NG + GYKI +   +   +   ++
Sbjct: 1618 VGEAVP-TAAPRNVVVHGATATQLDVTWEPPPLDSQNGDIQGYKIYFWEAQRQNLTERVK 1676

Query: 555  RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
             L ++++    S KL  L   T Y + +A +  AGDG  S
Sbjct: 1677 TL-FLAE---NSVKLKNLTGYTAYMVSVAAFNAAGDGPRS 1712


>gi|126308803|ref|XP_001378472.1| PREDICTED: protein sidekick-2 [Monodelphis domestica]
          Length = 2258

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 181/608 (29%), Positives = 263/608 (43%), Gaps = 38/608 (6%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V     +V + C+    PL +   IW KDGVP+  S  +S  N  + L I + + S
Sbjct: 308 KNTSVVAGTSEVTMECVANARPLIKLHIIWKKDGVPV--SGGVSDHN--RRLTILNPKGS 363

Query: 98  DQGSYTCEV---SNGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLP 153
           + G Y CE    S+ V      ++ LSVL  P F  EPE  I A  E+ V   C+A G+P
Sbjct: 364 NTGYYECEAVLRSSSVPSVVRGAV-LSVLEPPQFIKEPERHITAEMEKVVDIPCQAKGVP 422

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
            P   W  +   I     +  R  G   + I  L   DTG + C A NS G V    Y+ 
Sbjct: 423 SPITTWYKDAAVIDVKKLSRFRLHGDGSLQISGLVPDDTGMFQCFARNSAGEVQTSTYLA 482

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T+LE
Sbjct: 483 VTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSIQLPRFTLLE 542

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A   
Sbjct: 543 SGSLLISPTRISDAGSYTCLATNSRGVDEASADLVVWARTRITMAPQDQSVIKGTKAFMT 602

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C    DPS+ +  VW +    +  +S PR     + SL ++++   D G YTCR  +   
Sbjct: 603 CGVTHDPSVSVRYVWEKDGAILGVDSTPRMRLDKNGSLHISQTWSGDIGTYTCRVLSAGG 662

Query: 389 FIEAQATLTVQVPLEAPSN-FTLIQVIDAKKAVVSW-NPVSPQSLRGHFRGYKVQTWTEK 446
                A L V+    AP +    +   + +   ++W  P    S   H+    V   +E 
Sbjct: 663 NDSRSAYLRVRQLPHAPEHPVATLSTAERRSINLTWAKPFDGNSPLIHY----VLEMSEN 718

Query: 447 DGEGSIRELIVN-KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPG 505
           +   ++  L+ N   E+T+  V   VPA     R+ A N    G  S+    V+    P 
Sbjct: 719 NAPWTV--LLPNVDPEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPP 776

Query: 506 TVQSLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
           T      I  G +  +  ++W  P +   NG+L GY I++  + G  VG    +   I++
Sbjct: 777 TAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRF-CLAGLPVG---YQFRNITN 832

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPN 616
               +  L  L   T Y I +A Y  AG G  S       L  VP   P NV        
Sbjct: 833 ADVNNLLLEELIIWTNYEISVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVRAEAINST 892

Query: 617 NLVISWTA 624
            +  +W A
Sbjct: 893 TIRFTWNA 900



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 173/642 (26%), Positives = 258/642 (40%), Gaps = 83/642 (12%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K Q V+  +   ++  ++  F      P PQ  W +DG  I PS RI+      +L+I  
Sbjct: 206 KHQSVSHGEAAVIKAPRISSF------PQPQVTWFRDGRKIPPSSRIAI-TLDNTLVILS 258

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFINAAEEET------- 142
               D G Y  + V++  G+ K S  I L+V  +  P   + P  I   +  +       
Sbjct: 259 TVAPDAGRYYVQAVNDKNGDNKTSQPITLTVENVGGPADPIAPTIIIPPKNTSVVAGTSE 318

Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
           VT EC A+  P  ++H  W  +G P+S    +  R     R+TI N + S+TG Y C A 
Sbjct: 319 VTMECVANARPLIKLHIIWKKDGVPVSGGVSDHNR-----RLTILNPKGSNTGYYECEAV 373

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNW---- 252
             ++S+  V +   ++VL   P+  + P+   T + + VV + C+  G P P   W    
Sbjct: 374 LRSSSVPSVVRGAVLSVL-EPPQFIKEPERHITAEMEKVVDIPCQAKGVPSPITTWYKDA 432

Query: 253 -IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHI 310
            + + K+L+  R+ +   G L+I+ +   D+G + CFARN  G  Q S  L V     +I
Sbjct: 433 AVIDVKKLS--RFRLHGDGSLQISGLVPDDTGMFQCFARNSAGEVQTSTYLAVTSIAPNI 490

Query: 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFES--EPRFVQSNDYSLTV 368
           T  P D  V  G S    C     P  + +I W +G   +   S   PRF      SL +
Sbjct: 491 TRGPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSIQLPRFTLLESGSLLI 548

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLI----QVIDAKKAVVSWN 424
           + +   D+G YTC A       EA A L V     A +  T+      VI   KA ++  
Sbjct: 549 SPTRISDAGSYTCLATNSRGVDEASADLVVW----ARTRITMAPQDQSVIKGTKAFMTCG 604

Query: 425 PVSPQSLRGHFRGYKVQTWTEKDGE----GSIRELIVNKGESTTTEVDKFVPASKNFARV 480
                S+   +       W EKDG      S   + ++K  S                RV
Sbjct: 605 VTHDPSVSVRY------VW-EKDGAILGVDSTPRMRLDKNGSLHISQTWSGDIGTYTCRV 657

Query: 481 LAFNGAYNGPPSEIISFV----TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMG 536
           L+  G  N   S  +        PE    T+ + E       +  L W KP   N  L+ 
Sbjct: 658 LSAGG--NDSRSAYLRVRQLPHAPEHPVATLSTAE-----RRSINLTWAKPFDGNSPLIH 710

Query: 537 YKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY 596
           Y ++          P    LP + DP  TS  + GL P+  Y+  L      G G  SK 
Sbjct: 711 YVLEMSE----NNAPWTVLLPNV-DPEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKD 765

Query: 597 LFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNA 632
              V      P   P NV   G T  +++I W   PE   N 
Sbjct: 766 TERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNG 807



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 148/587 (25%), Positives = 226/587 (38%), Gaps = 68/587 (11%)

Query: 51   VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEV 106
            V L C   G P P   W K G  I  S  I    +      SL+I     SD GSYTC  
Sbjct: 505  VVLACETSGAPRPAITWQK-GERILASGSIQLPRFTLLESGSLLISPTRISDAGSYTCLA 563

Query: 107  SN--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNG 163
            +N  GV EA   S DL V A    T+ P+  +  +       C  +  P   + +V    
Sbjct: 564  TNSRGVDEA---SADLVVWARTRITMAPQDQSVIKGTKAFMTCGVTHDPSVSVRYVWEKD 620

Query: 164  KPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAPE 220
              I      PR ++  N  + I      D G Y C   ++ G   +  Y+ V  L HAPE
Sbjct: 621  GAILGVDSTPRMRLDKNGSLHISQTWSGDIGTYTCRVLSAGGNDSRSAYLRVRQLPHAPE 680

Query: 221  ITEAPKDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAF 279
               A     T + +++ LT  + F    P ++++    E       +L   D + T V  
Sbjct: 681  HPVATLS--TAERRSINLTWAKPFDGNSPLIHYVLEMSENNAPWTVLLPNVDPEATSVMV 738

Query: 280  -----ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS--ATFRCN-- 330
                 A S ++   A N +G  Q S      + T     PE+      Q+  A+ R N  
Sbjct: 739  KGLVPARSYQFRLCAVNDVGKGQFS------KDTERVSLPEEPPTAPPQNVIASGRTNQS 792

Query: 331  ----------AVSDPSLKLSIV-WLRGSEPIDFESEPRFVQSNDYS------LTVTKSSE 373
                      +  +  LK  I+ +     P+ ++   R + + D +      L +  + E
Sbjct: 793  IMIQWQPPPESHQNGILKGYIIRFCLAGLPVGYQF--RNITNADVNNLLLEELIIWTNYE 850

Query: 374  LDSGQYTCRAQTELDFIEAQAT-LTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
            +    Y       L    ++ T  T+Q VP   P N    + I++     +WN  SPQ +
Sbjct: 851  ISVAAYNSAG---LGVYSSKVTEWTLQGVPTVPPGNVR-AEAINSTTIRFTWNAPSPQFI 906

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR----VLAFNGAY 487
             G  +GYK+  W E + E  +  +        +  V  FV   K F      VL F    
Sbjct: 907  NGINQGYKLIAW-EPEQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYFTSVLCFTTPG 964

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
            +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY+I ++    T
Sbjct: 965  DGPRSLPQLVRTHEDVPGPVGHLSFNEILDTSLKVSWQEPGERNGILTGYRISWEEYNRT 1024

Query: 548  KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
                   R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 1025 NT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 1066



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 109/274 (39%), Gaps = 27/274 (9%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           +PYF  EP       E   +   C A G    E  W+HN + +++            R  
Sbjct: 111 SPYFKTEPVRTQVHLEGNRLVLTCMAEGSWPLEFKWLHNNRELTKFSLE-------YRYM 163

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RV 242
           I +L ++  G Y C   N +G + +      +A+     E  K +    G+  V+   R+
Sbjct: 164 ITSLDRTHAGFYRCIVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAAVIKAPRI 223

Query: 243 FGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSG 300
              P+P+V W  + +++    R  I     L I      D+G Y   A N K G  + S 
Sbjct: 224 SSFPQPQVTWFRDGRKIPPSSRIAITLDNTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQ 283

Query: 301 --SLTVKEHTHITD--------QPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEP 349
             +LTV+      D         P++  V AG S  T  C A + P +KL I+W +   P
Sbjct: 284 PITLTVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIIWKKDGVP 343

Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +        V  ++  LT+      ++G Y C A
Sbjct: 344 VSGG-----VSDHNRRLTILNPKGSNTGYYECEA 372



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 67/295 (22%), Positives = 116/295 (39%), Gaps = 26/295 (8%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V WN +      G   GYKV  + EKD +   +  +V  
Sbjct: 1284 VPSSGPTNVSALATTSSS-MLVRWNEIPEADRNGLVLGYKV-VYKEKDSDTQPQFWLVEG 1341

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    +  +
Sbjct: 1342 NSSLSAQLTGLGRYVLYEIQVLAFTRIGDGTPSSPPILERTLDDVPGPPMGILFPEVRPT 1401

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P + Y
Sbjct: 1402 SVRLIWQPPAAPNGIILAYQITHRLNTTTANTASVEVL----TPSARQYTATGLKPESIY 1457

Query: 579  RIHLAGYTKAGDGAESKYLFYV------------PFKNPDNVEGRGSTPNNLVISWTAMP 626
               +   T+ G G  ++ L               P  N +NV+ R     ++++SW   P
Sbjct: 1458 LFRIMAQTRKGWGEAAEALVVTTEKRDRPQPPSKPVINQENVKAR-----SVLLSWE--P 1510

Query: 627  EIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQT 681
              +  +P   Y I  R   +G+       +    +  V+     F  Y+ +V  T
Sbjct: 1511 GSDGLSPVRYYTIQTRELPSGKWALHSSSVTHNATSFVVDRLKPFTSYKFRVKST 1565



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 128/308 (41%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 1044 LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGPPTNLGISN---------- 1089

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +   G + E    L+V    N+ ++ + EV    P
Sbjct: 1090 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLVHQLANEPDARSMEVPNLNP 1149

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  PG V    A     ++ +L+W+  
Sbjct: 1150 YTFYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPGNVTLRTA---SETSLWLRWMPL 1206

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY    G   G  L  +  + D       +  LE  T+YR+ + 
Sbjct: 1207 PEMEYNGNPESVGYKIKYTRSDGH--GKTLSHV--VHDRIEREYTIEDLEEWTEYRVQVQ 1262

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S+ +       VP   P NV    +T +++++ W  +PE + N     Y+
Sbjct: 1263 AFNAIGTGPWSQIVVGRTRESVPSSGPTNVSALATTSSSMLVRWNEIPEADRNGLVLGYK 1322

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1323 VVYKEKDS 1330



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 114/271 (42%), Gaps = 46/271 (16%)

Query: 414  IDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDK 469
            + A+  ++SW P    +SP       R Y +QT     G+ ++    V    +T+  VD+
Sbjct: 1499 VKARSVLLSWEPGSDGLSP------VRYYTIQTRELPSGKWALHSSSVTH-NATSFVVDR 1551

Query: 470  FVPASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKW 524
              P +    RV + N   +   SE    +T     PE  P     L   P  +++  + W
Sbjct: 1552 LKPFTSYKFRVKSTNDIGDSEYSEESESLTTLQAAPEEAPTI---LSVTPHTTTSVLISW 1608

Query: 525  VKP--EQPNGVLMGYKIKYQSV---------------KGTKVGPL--LERLPYISDPTTT 565
              P  ++ NG+L+G++I+Y+ +                 TK   L  +  +  +S P+ T
Sbjct: 1609 QPPAEDKINGILLGFRIRYRELLYEGLRGFTMRNINNPSTKWAELTSMYAVRNLSRPSLT 1668

Query: 566  SAKLAGLEPSTKYRIHLAGYTKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVI 620
              +L  L    +Y I ++ Y   G+G  S  + +F    VP   P NV   G+T   L +
Sbjct: 1669 QYELDNLSKHKRYEIRMSVYNAVGEGPSSSPQEVFVGEAVPTAPPQNVAVHGATATQLDV 1728

Query: 621  SWTAMPEIEHNAPHFKYRI-FW--RRHNTGE 648
            +W   P    N     Y+I FW  +R N+ E
Sbjct: 1729 TWEPPPLEAQNGDIQGYKIYFWEAQRRNSTE 1759



 Score = 47.4 bits (111), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 57/140 (40%), Gaps = 2/140 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P N   +    A +  V+W P   ++  G  +GYK+  W E     S   L    
Sbjct: 1708 VPTAPPQNVA-VHGATATQLDVTWEPPPLEAQNGDIQGYKIYFW-EAQRRNSTERLKTLF 1765

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
                  ++      +     V AFN A +GP S      T +  P    +++   L +++
Sbjct: 1766 LPENGVKLKNLTGYTAYLVSVAAFNAAGDGPRSAPSQGRTQQAAPSAPSTVKFSELTTTS 1825

Query: 520  FYLKWVKPEQPNGVLMGYKI 539
              + W  P  PNGVL GYK+
Sbjct: 1826 VNVSWEPPLFPNGVLEGYKL 1845



 Score = 39.3 bits (90), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 51/221 (23%), Positives = 81/221 (36%), Gaps = 36/221 (16%)

Query: 401  PLEAPSNFTLIQVI--DAKKAVVSWNPVSPQSLRGHFRGYKVQ----------------- 441
            P EAP   T++ V        ++SW P +   + G   G++++                 
Sbjct: 1587 PEEAP---TILSVTPHTTTSVLISWQPPAEDKINGILLGFRIRYRELLYEGLRGFTMRNI 1643

Query: 442  -----TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS 496
                  W E     ++R L  ++   T  E+D      +   R+  +N    GP S    
Sbjct: 1644 NNPSTKWAELTSMYAVRNL--SRPSLTQYELDNLSKHKRYEIRMSVYNAVGEGPSSSPQE 1701

Query: 497  FVTPEGVP-GTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLL 553
                E VP    Q++      ++   + W  P  E  NG + GYKI +   +        
Sbjct: 1702 VFVGEAVPTAPPQNVAVHGATATQLDVTWEPPPLEAQNGDIQGYKIYFWEAQRRNS---T 1758

Query: 554  ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            ERL  +  P     KL  L   T Y + +A +  AGDG  S
Sbjct: 1759 ERLKTLFLPEN-GVKLKNLTGYTAYLVSVAAFNAAGDGPRS 1798


>gi|301781638|ref|XP_002926235.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-2-like [Ailuropoda
           melanoleuca]
          Length = 2167

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 177/606 (29%), Positives = 261/606 (43%), Gaps = 34/606 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V     +V + C+    PL +   IW KDGVP+  S  +S  +Y + L I     S
Sbjct: 225 KNTSVVAGTSEVTMECVANARPLIKLHIIWKKDGVPL--SGGLS--DYNRRLTIPSPMGS 280

Query: 98  DQGSYTCEV---SNGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLP 153
           D G Y CE    S+ V      +  LSVL  P F  EPE  I A  E+ V   C+A G+P
Sbjct: 281 DAGYYECEAVLRSSSVPSVIRGAF-LSVLEPPQFVKEPERHITAEMEKVVDIPCRAKGVP 339

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
            P I W  +   +     +   +     + I  L   DTG + C A N+ G V    Y+ 
Sbjct: 340 PPSISWYKDAAVVEVDKLSRFWQRSDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLA 399

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T+LE
Sbjct: 400 VTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLE 459

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L ++    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+  
Sbjct: 460 SGSLLVSPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMV 519

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C    DP + +  VW +    +  E+ PR     + SL ++++   D G YTCR  +   
Sbjct: 520 CGVTHDPRVTVRYVWEKDGATLGTENNPRIRLDKNGSLHISQTWSGDIGTYTCRVLSAGG 579

Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV-VSWNPVSPQSLRGHFRGYKVQTWTEKD 447
                A L V+    AP +         ++A+ ++W    P         Y ++  +E +
Sbjct: 580 NDSRSAHLRVRQLPHAPEHPVATLSTAERRAINLTW--AKPFDGNSPLLRYVLEM-SENN 636

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV 507
              ++    V+  E+T+  V   VPA     R+ A N    G  S+    V+    P T 
Sbjct: 637 APWTVLLASVDP-EATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTA 695

Query: 508 QSLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
                I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I+D  
Sbjct: 696 PPQNVIASGRTNQSIMIQWQPPPESHQNGLLKGYIIRY-CLAGLPVG---YQFKNITDAD 751

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNL 618
             +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    +    +
Sbjct: 752 VNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTI 811

Query: 619 VISWTA 624
             +W A
Sbjct: 812 RFTWNA 817



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 178/692 (25%), Positives = 272/692 (39%), Gaps = 91/692 (13%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K Q V+  +   +R  ++  F      P PQ  W +DG  I PS RI+      +L+I  
Sbjct: 123 KHQSVSHGEAAVIRAPRIASF------PRPQVTWFRDGRKIPPSSRIAI-TLENTLVILS 175

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFINAAEEETV------ 143
               D G Y  + V++  G+ K S  + L+V  +  P   + P  I   +  +V      
Sbjct: 176 TVAPDAGRYYVQAVNDKNGDNKTSQPVTLAVENVGGPADPIAPTIIIPPKNTSVVAGTSE 235

Query: 144 -TFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
            T EC A+  P  ++H  W  +G P+S    +  R     R+TI +   SD G Y C A 
Sbjct: 236 VTMECVANARPLIKLHIIWKKDGVPLSGGLSDYNR-----RLTIPSPMGSDAGYYECEAV 290

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+  V +  +++VL   P+  + P+   T + + VV + CR  G P P ++W  + 
Sbjct: 291 LRSSSVPSVIRGAFLSVL-EPPQFVKEPERHITAEMEKVVDIPCRAKGVPPPSISWYKDA 349

Query: 257 KEL---TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHITD 312
             +      R+     G L+I+ +   D+G + CFARN  G  Q S  L V     +IT 
Sbjct: 350 AVVEVDKLSRFWQRSDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAVTSIAPNITR 409

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTK 370
            P D  V  G S    C     P  + +I W +G   +   S   PRF      SL V+ 
Sbjct: 410 GPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTLLESGSLLVSP 467

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQS 430
           +   D+G YTC A       EA A L                V+ A+  +    P   QS
Sbjct: 468 THISDAGTYTCLATNSRGVDEASADL----------------VVWARTRIT--KPPQDQS 509

Query: 431 LRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN-------------- 476
           +    +   V   T  D   ++R +    G +  TE +  +   KN              
Sbjct: 510 VIKGTQASMVCGVTH-DPRVTVRYVWEKDGATLGTENNPRIRLDKNGSLHISQTWSGDIG 568

Query: 477 --FARVLAFNGAYNGPPSEIISFV--TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
               RVL+  G  +      +  +   PE    T+ + E       A  L W KP   N 
Sbjct: 569 TYTCRVLSAGGNDSRSAHLRVRQLPHAPEHPVATLSTAE-----RRAINLTWAKPFDGNS 623

Query: 533 VLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 592
            L+ Y ++  S        LL  +    DP  TS  + GL P+  Y+  L      G G 
Sbjct: 624 PLLRYVLE-MSENNAPWTVLLASV----DPEATSVMVKGLVPARSYQFRLCAVNDVGKGQ 678

Query: 593 ESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
            SK    V      P   P NV   G T  +++I W   PE   N     Y I +     
Sbjct: 679 FSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGLLKGYIIRYCLAGL 738

Query: 647 GEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
              +   ++ D   + L+L +   +  YEI+V
Sbjct: 739 PVGYQFKNITDADVNNLLLEDLIIWTNYEIEV 770



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 109/276 (39%), Gaps = 31/276 (11%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           APYF  EP       E   +   C A G    E  W+HN + +++            R  
Sbjct: 28  APYFKTEPVRTQVHLEGNRLVLTCMAEGSWPLEFKWLHNNRELTKFSLE-------YRYM 80

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RV 242
           I +L ++  G Y C   N +G + +      +A+     E  K +    G+  V+   R+
Sbjct: 81  ITSLDRTHAGFYRCIVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAAVIRAPRI 140

Query: 243 FGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSG 300
              P+P+V W  + +++    R  I     L I      D+G Y   A N K G  + S 
Sbjct: 141 ASFPRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQ 200

Query: 301 SLTVK----------EHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEP 349
            +T+               I   P++  V AG S  T  C A + P +KL I+W +   P
Sbjct: 201 PVTLAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIIWKKDGVP 260

Query: 350 IDFESEPRFVQSNDYSLTVTKSSEL--DSGQYTCRA 383
           +           +DY+  +T  S +  D+G Y C A
Sbjct: 261 LSG-------GLSDYNRRLTIPSPMGSDAGYYECEA 289



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 11/177 (6%)

Query: 422 SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR-- 479
           +WN  SPQ + G  +GYK+  W E + E  +  +        +  V  FV   K F    
Sbjct: 814 TWNAPSPQFINGINQGYKLIAW-EPEQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYF 871

Query: 480 --VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
             VL F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY
Sbjct: 872 TSVLCFTTPGDGPRSTPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGY 931

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           +I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 932 RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTAKGQGQVS 983



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 128/311 (41%), Gaps = 43/311 (13%)

Query: 414  IDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDK 469
            + A+  ++SW P    +SP       R Y VQT     G  ++    V+   S    VD+
Sbjct: 1416 VKARSVLLSWEPGSDGLSP------VRYYTVQTRELPGGRWALHSASVSHNASAFV-VDR 1468

Query: 470  FVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPGTVQSLEAI-PLGSSAFYLKWVKP 527
              P +    RV A N   +   SE      T +  P    ++ ++ P  +++  ++W  P
Sbjct: 1469 LKPFTSYKFRVKATNDIGDSEFSEESEPLTTLQAAPDEAPTIVSVTPHTTTSVLIRWQPP 1528

Query: 528  --EQPNGVLMGYKIKYQSV---------------KGTKVGPL--LERLPYISDPTTTSAK 568
              ++ NG+L+G++I+Y+ +                G K   L  L  +  +S P+ T  +
Sbjct: 1529 AEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELTSLYSMRNLSRPSLTQYE 1588

Query: 569  LAGLEPSTKYRIHLAGYTKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWT 623
            L  L    +Y I ++ Y   G+G  S  + +F    VP   P NV   G+T   L ++W 
Sbjct: 1589 LDNLNKHRRYEIRMSVYNAVGEGPSSPPQEVFVGEAVPTAAPRNVAVHGATATQLDVTWE 1648

Query: 624  AMPEIEHNAPHFKYRI-FW--RRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQ 680
              P    N     Y+I FW  +R N  E   +   L   ++ + L N   +  Y + V  
Sbjct: 1649 PPPLESQNGDIQGYKIYFWEAQRRNLTE---RVKTLFLAENGVKLKNLTGYTAYMVSVAA 1705

Query: 681  TWTEKDGEGSI 691
                 DG  S+
Sbjct: 1706 FNAAGDGPRSL 1716



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 129/308 (41%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 961  LTALTTYTIEVAAMTAKGQGQV----SASTISSGVPPELPGAPTNLGISN---------- 1006

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +   G + E    L+V    N+ ++ + EV +  P
Sbjct: 1007 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLVHQLTNEPDARSMEVPELNP 1066

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+WV  
Sbjct: 1067 FTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTA---SETSLWLRWVPL 1123

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY    G   G  L  +  + D       +  LE  T+YR+ + 
Sbjct: 1124 PEMEYNGNPESVGYKIKYSRADGH--GKTLSHV--VQDRVEREYTIEDLEEWTEYRVQVQ 1179

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S+ +       VP   P NV    +T +++++ W+ +PE + N     Y+
Sbjct: 1180 AFNAIGSGPWSQTVMGRTRESVPSSGPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYK 1239

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1240 VIYKEKDS 1247



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N   +    A +  V+W P   +S  G  +GYK+  W  +    + R   +  
Sbjct: 1625 VPTAAPRNVA-VHGATATQLDVTWEPPPLESQNGDIQGYKIYFWEAQRRNLTERVKTLFL 1683

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E+   ++      +     V AFN A +GP S      T +  P    S++   L +++
Sbjct: 1684 AENGV-KLKNLTGYTAYMVSVAAFNAAGDGPRSLPTRGQTQQAAPSAPSSVKFSELTTTS 1742

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNGVL GY++ Y+
Sbjct: 1743 VNVSWEAPQFPNGVLEGYRLVYE 1765



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ +      G   GYKV  + EKD +   R  +V  
Sbjct: 1201 VPSSGPTNVSALATTSSS-MLVRWSEIPEADRNGLVLGYKV-IYKEKDSDSQPRFWLVEG 1258

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1259 NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPVGILFPEVRTT 1318

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y++ ++    T     +E L     P+       GL+P + Y
Sbjct: 1319 SVRLIWQPPAAPNGIILAYQVTHRLNATTANTATVEVL----APSARQYTATGLKPESVY 1374

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1375 LFRITAQTRKGWGEAAEAL 1393


>gi|157819517|ref|NP_001101773.1| protein sidekick-2 [Rattus norvegicus]
 gi|149054713|gb|EDM06530.1| sidekick homolog 2 (chicken) (predicted) [Rattus norvegicus]
          Length = 2053

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 175/606 (28%), Positives = 259/606 (42%), Gaps = 34/606 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V     +V + C+    PL +   +W KDG  +  S+ IS  +Y + L I +   S
Sbjct: 126 KNTSVVAGTSEVTMECVANARPLIKLHIVWKKDGALL--SNGIS--DYNRRLTITNPMVS 181

Query: 98  DQGSYTCEV---SNGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLP 153
           D G Y CE    S+ V      +  LSVL  P F  EPE  I A  E+ V   C+A G+P
Sbjct: 182 DAGYYECEAMLRSSSVAPVTRGAY-LSVLEPPQFVREPERHITAEMEKVVDIPCRAKGVP 240

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
            P I W  +   +        ++     + I  L   DTG   C A N+ G      Y+ 
Sbjct: 241 PPSITWYKDAALVEVGKLTRFKQRSDGGLQISGLLPDDTGMVQCFAHNAAGEAQTSTYLA 300

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T+LE
Sbjct: 301 VTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLE 360

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+  
Sbjct: 361 SGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMV 420

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C    DP + +  VW +    +  E+ PR     + SL ++++   D G YTCR  +   
Sbjct: 421 CGVTHDPRVTVRYVWEKDGATLAVETNPRIRLDRNGSLHISQTWSGDIGTYTCRVLSAGG 480

Query: 389 FIEAQATLTVQVPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
                A L V+    AP +    +  ++ +   ++W    P         Y ++  +E +
Sbjct: 481 NDSRNAHLRVRQLPHAPEHPVATLSTMERRAINLTW--AKPFDGNSPLMRYILEM-SENN 537

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV 507
              +I    V+  E+T+  V   VPA     R+ A N    G  S+    V+    P T 
Sbjct: 538 APWTILLASVDP-EATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTA 596

Query: 508 QSLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
                I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I+D  
Sbjct: 597 PPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRY-CLAGLPVG---YQFKNITDAD 652

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNL 618
             +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    +    +
Sbjct: 653 VNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTAI 712

Query: 619 VISWTA 624
             +W A
Sbjct: 713 RFTWNA 718



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 180/684 (26%), Positives = 270/684 (39%), Gaps = 75/684 (10%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K Q V+  +   ++  ++  F      P PQ  W +DG  I PS RI+      +L+I  
Sbjct: 24  KHQSVSHGEAAVIKAPRISSF------PRPQVTWFRDGRKIPPSSRIAI-TLENTLVILS 76

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFINAAEEET------- 142
               D G Y  + V++  G+ K S  I L+V  +  P   + P  I   +  +       
Sbjct: 77  TVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSE 136

Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
           VT EC A+  P  ++H  W  +G  +S    +  R     R+TI N   SD G Y C A 
Sbjct: 137 VTMECVANARPLIKLHIVWKKDGALLSNGISDYNR-----RLTITNPMVSDAGYYECEAM 191

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+  V +  Y++VL   P+    P+   T + + VV + CR  G P P + W  + 
Sbjct: 192 LRSSSVAPVTRGAYLSVL-EPPQFVREPERHITAEMEKVVDIPCRAKGVPPPSITWYKDA 250

Query: 257 KELTGGRYTILET---GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHITD 312
             +  G+ T  +    G L+I+ +   D+G   CFA N  G AQ S  L V     +IT 
Sbjct: 251 ALVEVGKLTRFKQRSDGGLQISGLLPDDTGMVQCFAHNAAGEAQTSTYLAVTSIAPNITR 310

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTK 370
            P D  V  G S    C     P  + +I W +G   +   S   PRF      SL ++ 
Sbjct: 311 GPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTLLESGSLLISP 368

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQS 430
           +   D+G YTC A       EA A L V          T I      ++V+     S   
Sbjct: 369 THISDAGTYTCLATNSRGVDEASADLVVWA-------RTRITKPPQDQSVIKGTQASMVC 421

Query: 431 LRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFA--------RVLA 482
              H     V+   EKDG      L V        + +  +  S+ ++        RVL+
Sbjct: 422 GVTHDPRVTVRYVWEKDGA----TLAVETNPRIRLDRNGSLHISQTWSGDIGTYTCRVLS 477

Query: 483 FNGAYNGPPSEIISFV--TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
             G  +      +  +   PE    T+ ++E       A  L W KP   N  LM Y ++
Sbjct: 478 AGGNDSRNAHLRVRQLPHAPEHPVATLSTME-----RRAINLTWAKPFDGNSPLMRYILE 532

Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV 600
             S        LL  +    DP  TS  + GL P+  Y+  L      G G  SK    V
Sbjct: 533 -MSENNAPWTILLASV----DPEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERV 587

Query: 601 ------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
                 P   P NV   G T  +++I W   PE   N     Y I +        +   +
Sbjct: 588 SLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKN 647

Query: 655 VLDWRQSELVLANQPTFQPYEIKV 678
           + D   + L+L +   +  YEI+V
Sbjct: 648 ITDADVNNLLLEDLIIWTNYEIEV 671



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 74/177 (41%), Gaps = 11/177 (6%)

Query: 422 SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR-- 479
           +WN  SPQ + G  +GYK+  W E   E  +  +        +  V  FV   K F    
Sbjct: 715 TWNAPSPQFINGINQGYKLIAW-EPTQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYF 772

Query: 480 --VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
             VL F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY
Sbjct: 773 TSVLCFTTPGDGPRSSPQLVRTHEDVPGPVGHLSFNDILDTSLKVSWQEPGEKNGILTGY 832

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           +I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 833 RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 884



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ +      G   GYKV+ + EKD +   R  +V  
Sbjct: 1102 VPSSGPTNVSALATTSSS-MLVRWSEIPEADRNGLVLGYKVR-YKEKDSDSQARFWLVEG 1159

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1160 NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 1219

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P + Y
Sbjct: 1220 SVRLIWQPPATPNGIILAYQITHRLNATTANTATVEVL----APSARQYMATGLKPESVY 1275

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1276 LFRITAQTRKGWGEAAEAL 1294



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/308 (22%), Positives = 127/308 (41%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 862  LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGAPTNLGISN---------- 907

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +   G I E    L++    N+ ++ + EV    P
Sbjct: 908  IGPRSVTLQFRPGYDGKTSISRWVVEAQVGMIGEGEEWLLIYQLSNEPDARSMEVPDLNP 967

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 968  FTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTA---SETSLWLRWMPL 1024

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY    G   G  L     + D       +  LE  T+YR+ + 
Sbjct: 1025 PEMEYNGNPESVGYKIKYSRSDGH--GKTLSHT--VQDRVEREYTIEDLEEWTEYRVQVQ 1080

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S+ +       VP   P NV    +T +++++ W+ +PE + N     Y+
Sbjct: 1081 AFNAIGSGPWSQAVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYK 1140

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1141 VRYKEKDS 1148



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N   I    A +  V+W P    +  G  +GYK+  W  +    + R   +  
Sbjct: 1507 VPTAAPQNVA-IHSATATQLDVTWEPPPLDNQNGDIQGYKIYFWEVQRRNLTERVKTLFL 1565

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E++  ++      +     V AFN A +GP S      T +  P    S++   L +++
Sbjct: 1566 AENSV-KLKNLTGYTAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSAPGSVKFSELTTTS 1624

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNG L GY++ Y+
Sbjct: 1625 VNVSWDAPQFPNGPLEGYRLVYE 1647


>gi|397484478|ref|XP_003813403.1| PREDICTED: protein sidekick-2 [Pan paniscus]
          Length = 2172

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 177/605 (29%), Positives = 256/605 (42%), Gaps = 32/605 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V     +V L C+    PL +   IW KDGV +  S  IS  N  + L I +   S
Sbjct: 222 KNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGVLL--SGGISDHN--RRLTIPNPTSS 277

Query: 98  DQGSYTCEVSNGVGEAKSY--SIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPE 154
           D G Y CE         S      LSVL  P F  EPE  I A  E+ V   C+A G+P 
Sbjct: 278 DAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQFVKEPERHITAEMEKVVDIPCRAKGVPP 337

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
           P I W  +   +        R+     + I  L   DTG + C A N+ G V    Y+ V
Sbjct: 338 PSITWYKDAAVVEVEKLTRFRQRSDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAV 397

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILET 269
            + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T LE+
Sbjct: 398 TSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLES 457

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+  C
Sbjct: 458 GSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVC 517

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
               DP + +  +W +    +  ES PR     + SL ++++   D G YTCR  +    
Sbjct: 518 GVTHDPRVTIRYIWEKDGATLGTESHPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGN 577

Query: 390 IEAQATLTVQVPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
               A L V+    AP +    +  ++ +   ++W    P         Y ++  +E + 
Sbjct: 578 DSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWT--KPFDGNSPLIRYILEM-SENNA 634

Query: 449 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ 508
             ++    V+  ++T+  V   VPA     R+ A N    G  S+    V+    P T  
Sbjct: 635 PWTVLLASVDP-KATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAP 693

Query: 509 SLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT 564
               I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I+D   
Sbjct: 694 PQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRY-CLAGLPVG---YQFKNITDADV 749

Query: 565 TSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLV 619
            +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    +    + 
Sbjct: 750 NNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIR 809

Query: 620 ISWTA 624
            +W A
Sbjct: 810 FTWNA 814



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 180/686 (26%), Positives = 274/686 (39%), Gaps = 79/686 (11%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K Q V+  +   +R  ++  F      P PQ  W +DG  I PS RI+      +L+I  
Sbjct: 120 KHQSVSHGEAAVIRAPRIASF------PQPQVTWFRDGRKIPPSSRIAI-TLENTLVILS 172

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFINAAEEET------- 142
               D G Y  + V++  G+ K S  I L+V  +  P   + P  I   +  +       
Sbjct: 173 TVAPDAGRYYVQAVNDKNGDNKTSQPITLTVENVGGPADPIAPTIIIPPKNTSVVAGTSE 232

Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
           VT EC A+  P  ++H  W  +G  +S    +  R     R+TI N   SD G Y C A 
Sbjct: 233 VTLECVANARPLIKLHIIWKKDGVLLSGGISDHNR-----RLTIPNPTSSDAGYYECEAV 287

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+  V +  Y++VL   P+  + P+   T + + VV + CR  G P P + W  + 
Sbjct: 288 LRSSSVPSVVRGAYLSVL-EPPQFVKEPERHITAEMEKVVDIPCRAKGVPPPSITWYKDA 346

Query: 257 -----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HI 310
                ++LT  R+     G L+I+ +   D+G + CFARN  G  Q S  L V     +I
Sbjct: 347 AVVEVEKLT--RFRQRSDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAVTSIAPNI 404

Query: 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTV 368
           T  P D  V  G S    C     P  + +I W +G   +   S   PRF      SL +
Sbjct: 405 TRGPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTPLESGSLLI 462

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAV-VSWN 424
           + +   D+G YTC A       EA A L V       + P + ++I+   A     V+ +
Sbjct: 463 SPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVCGVTHD 522

Query: 425 P-VSPQSL---RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           P V+ + +    G   G +       D  GS+       G+  T    + + A  N +R 
Sbjct: 523 PRVTIRYIWEKDGATLGTESHPRIRLDRNGSLHISQTWSGDIGTYTC-RVISAGGNDSRS 581

Query: 481 --LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
             L      + P   + +  T E                 A  L W KP   N  L+ Y 
Sbjct: 582 AHLRVRQLPHAPEHPVATLSTVE---------------RRAINLTWTKPFDGNSPLIRYI 626

Query: 539 IKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF 598
           ++  S        LL  +    DP  TS  + GL P+  Y+  L      G G  SK   
Sbjct: 627 LE-MSENNAPWTVLLASV----DPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTE 681

Query: 599 YV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
            V      P   P NV   G T  +++I W   PE   N     Y I +        +  
Sbjct: 682 RVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQF 741

Query: 653 DDVLDWRQSELVLANQPTFQPYEIKV 678
            ++ D   + L+L +   +  YEI+V
Sbjct: 742 KNITDADVNNLLLEDLIIWTNYEIEV 767



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 109/274 (39%), Gaps = 27/274 (9%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           +PYF  EP       E   +   C A G    E  W+HN + +++            R  
Sbjct: 25  SPYFKTEPVRTQVHLEGNRLVLTCMAEGSWPLEFKWLHNNRELTKFSLE-------YRYM 77

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RV 242
           I +L ++  G Y C   N +G + +      +A+     E  K +    G+  V+   R+
Sbjct: 78  ITSLDRTHAGFYRCIVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAAVIRAPRI 137

Query: 243 FGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSG 300
              P+P+V W  + +++    R  I     L I      D+G Y   A N K G  + S 
Sbjct: 138 ASFPQPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQ 197

Query: 301 --SLTVKEHTHITD--------QPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEP 349
             +LTV+      D         P++  V AG S  T  C A + P +KL I+W +    
Sbjct: 198 PITLTVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGVL 257

Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +        +  ++  LT+   +  D+G Y C A
Sbjct: 258 LSGG-----ISDHNRRLTIPNPTSSDAGYYECEA 286



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 11/177 (6%)

Query: 422 SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR-- 479
           +WN  SPQ + G  +GYK+  W E + E  +  +        +  V  FV   K F    
Sbjct: 811 TWNAPSPQFINGINQGYKLIAW-EPEQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYF 868

Query: 480 --VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
             VL F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY
Sbjct: 869 TSVLCFTTPGDGPRSTPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGY 928

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           +I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 929 RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 980



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N  ++    A +  V+W P    S  G  +GYK+  W  + G  + R   +  
Sbjct: 1622 VPTAAPRN-VVVHGATATQLDVTWEPPPLDSQNGDIQGYKIYFWEAQRGNLTERVKTLFL 1680

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E++  ++      +     V AFN A +GP S      T +  P    S++   L +++
Sbjct: 1681 AENSV-KLKNLTGYTAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSAPSSVKFSELTTTS 1739

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNG+L GY++ Y+
Sbjct: 1740 VNVSWEAPQFPNGILEGYRLVYE 1762



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 138/347 (39%), Gaps = 48/347 (13%)

Query: 379  YTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVID--AKKAVVSWNP----VSPQ 429
            +   AQT   + EA   L V         P +  ++Q  D  A+  ++SW P    +SP 
Sbjct: 1373 FRITAQTRKGWGEAAEALVVTTEKRDRPQPPSRPMVQQEDVRARSVLLSWEPGSDGLSP- 1431

Query: 430  SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
                  R Y +QT     G  ++    V+   S+   VD+  P +    RV A N   + 
Sbjct: 1432 -----VRYYTIQTRELPSGRWALHSASVSHNASSFI-VDRLKPFTSYKFRVKATNDIGDS 1485

Query: 490  PPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQ 542
              SE    +T     P+  P     L   P  +++  ++W  P  ++ NG+L+G++I+Y+
Sbjct: 1486 EFSEESESLTTLQAAPDEAPTI---LSVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYR 1542

Query: 543  SV--KGTKVGPL---------------LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
             +  +G +   L               +  +  +S P+ T  +L  L    +Y I ++ Y
Sbjct: 1543 ELLYEGLRGFTLRGINNPGATWAELTSMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVY 1602

Query: 586  TKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
               G+G  S  + +F    VP   P NV   G+T   L ++W   P    N     Y+I+
Sbjct: 1603 NAVGEGPSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQNGDIQGYKIY 1662

Query: 641  WRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDG 687
            +     G    +   L   ++ + L N   +  Y + V       DG
Sbjct: 1663 FWEAQRGNLTERVKTLFLAENSVKLKNLTGYTAYMVSVAAFNAAGDG 1709



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ V      G   GYKV  + EKD +   R  +V  
Sbjct: 1198 VPSSGPTNVSALATTSSS-MLVRWSEVPEADRNGLVLGYKVM-YKEKDSDTQPRFWLVEG 1255

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1256 NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 1315

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P + Y
Sbjct: 1316 SVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVL----APSARQYTATGLKPESVY 1371

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1372 LFRITAQTRKGWGEAAEAL 1390



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 129/308 (41%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 958  LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGPPTNLGISN---------- 1003

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +   G + E    L++    N+ ++ + EV    P
Sbjct: 1004 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNP 1063

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 1064 FTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTA---SETSLWLRWMPL 1120

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY    G   G  L ++  + D       +  LE  T+YR+ + 
Sbjct: 1121 PEMEYNGNPESVGYKIKYSRSDGR--GKTLSQV--VQDRVEREYTIEDLEEWTEYRVQVQ 1176

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S+ +       VP   P NV    +T +++++ W+ +PE + N     Y+
Sbjct: 1177 AFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYK 1236

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1237 VMYKEKDS 1244


>gi|332848956|ref|XP_511658.3| PREDICTED: protein sidekick-2 [Pan troglodytes]
          Length = 2172

 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 177/605 (29%), Positives = 256/605 (42%), Gaps = 32/605 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V     +V L C+    PL +   IW KDGV +  S  IS  N  + L I +   S
Sbjct: 222 KNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGVLL--SGGISDHN--RRLTIPNPTSS 277

Query: 98  DQGSYTCEVSNGVGEAKSY--SIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPE 154
           D G Y CE         S      LSVL  P F  EPE  I A  E+ V   C+A G+P 
Sbjct: 278 DAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQFVKEPERHITAEMEKVVDIPCRAKGVPP 337

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
           P I W  +   +        R+     + I  L   DTG + C A N+ G V    Y+ V
Sbjct: 338 PSITWYKDAAVVEVEKLTRFRQRSDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAV 397

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILET 269
            + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T LE+
Sbjct: 398 TSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLES 457

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+  C
Sbjct: 458 GSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVC 517

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
               DP + +  +W +    +  ES PR     + SL ++++   D G YTCR  +    
Sbjct: 518 GVTHDPRVTIRYIWEKDGATLGTESHPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGN 577

Query: 390 IEAQATLTVQVPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
               A L V+    AP +    +  ++ +   ++W    P         Y ++  +E + 
Sbjct: 578 DSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWT--KPFDGNSPLIRYILEM-SENNA 634

Query: 449 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ 508
             ++    V+  ++T+  V   VPA     R+ A N    G  S+    V+    P T  
Sbjct: 635 PWTVLLASVDP-KATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAP 693

Query: 509 SLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT 564
               I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I+D   
Sbjct: 694 PQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRY-CLAGLPVG---YQFKNITDADV 749

Query: 565 TSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLV 619
            +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    +    + 
Sbjct: 750 NNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIR 809

Query: 620 ISWTA 624
            +W A
Sbjct: 810 FTWNA 814



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 180/686 (26%), Positives = 274/686 (39%), Gaps = 79/686 (11%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K Q V+  +   +R  ++  F      P PQ  W +DG  I PS RI+      +L+I  
Sbjct: 120 KHQSVSHGEAAVIRAPRIASF------PQPQVTWFRDGRKIPPSSRIAI-TLENTLVILS 172

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFINAAEEET------- 142
               D G Y  + V++  G+ K S  I L+V  +  P   + P  I   +  +       
Sbjct: 173 TVAPDAGRYYVQAVNDKNGDNKTSQPITLTVENVGGPADPIAPTIIIPPKNTSVVAGTSE 232

Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
           VT EC A+  P  ++H  W  +G  +S    +  R     R+TI N   SD G Y C A 
Sbjct: 233 VTLECVANARPLIKLHIIWKKDGVLLSGGISDHNR-----RLTIPNPTSSDAGYYECEAV 287

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+  V +  Y++VL   P+  + P+   T + + VV + CR  G P P + W  + 
Sbjct: 288 LRSSSVPSVVRGAYLSVL-EPPQFVKEPERHITAEMEKVVDIPCRAKGVPPPSITWYKDA 346

Query: 257 -----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HI 310
                ++LT  R+     G L+I+ +   D+G + CFARN  G  Q S  L V     +I
Sbjct: 347 AVVEVEKLT--RFRQRSDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAVTSIAPNI 404

Query: 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTV 368
           T  P D  V  G S    C     P  + +I W +G   +   S   PRF      SL +
Sbjct: 405 TRGPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTPLESGSLLI 462

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAV-VSWN 424
           + +   D+G YTC A       EA A L V       + P + ++I+   A     V+ +
Sbjct: 463 SPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVCGVTHD 522

Query: 425 P-VSPQSL---RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           P V+ + +    G   G +       D  GS+       G+  T    + + A  N +R 
Sbjct: 523 PRVTIRYIWEKDGATLGTESHPRIRLDRNGSLHISQTWSGDIGTYTC-RVISAGGNDSRS 581

Query: 481 --LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
             L      + P   + +  T E                 A  L W KP   N  L+ Y 
Sbjct: 582 AHLRVRQLPHAPEHPVATLSTVE---------------RRAINLTWTKPFDGNSPLIRYI 626

Query: 539 IKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF 598
           ++  S        LL  +    DP  TS  + GL P+  Y+  L      G G  SK   
Sbjct: 627 LE-MSENNAPWTVLLASV----DPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTE 681

Query: 599 YV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
            V      P   P NV   G T  +++I W   PE   N     Y I +        +  
Sbjct: 682 RVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQF 741

Query: 653 DDVLDWRQSELVLANQPTFQPYEIKV 678
            ++ D   + L+L +   +  YEI+V
Sbjct: 742 KNITDADVNNLLLEDLIIWTNYEIEV 767



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 109/274 (39%), Gaps = 27/274 (9%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           +PYF  EP       E   +   C A G    E  W+HN + +++            R  
Sbjct: 25  SPYFKTEPVRTQVHLEGNRLVLTCMAEGSWPLEFKWLHNNRELTKFSLE-------YRYM 77

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RV 242
           I +L ++  G Y C   N +G + +      +A+     E  K +    G+  V+   R+
Sbjct: 78  ITSLDRTHAGFYRCIVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAAVIRAPRI 137

Query: 243 FGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSG 300
              P+P+V W  + +++    R  I     L I      D+G Y   A N K G  + S 
Sbjct: 138 ASFPQPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQ 197

Query: 301 --SLTVKEHTHITD--------QPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEP 349
             +LTV+      D         P++  V AG S  T  C A + P +KL I+W +    
Sbjct: 198 PITLTVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGVL 257

Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +        +  ++  LT+   +  D+G Y C A
Sbjct: 258 LSGG-----ISDHNRRLTIPNPTSSDAGYYECEA 286



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 11/177 (6%)

Query: 422 SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR-- 479
           +WN  SPQ + G  +GYK+  W E + E  +  +        +  V  FV   K F    
Sbjct: 811 TWNAPSPQFINGINQGYKLIAW-EPEQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYF 868

Query: 480 --VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
             VL F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY
Sbjct: 869 TSVLCFTTPGDGPRSTPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGY 928

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           +I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 929 RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 980



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N  ++    A +  V+W P    S  G  +GYK+  W  + G  + R   +  
Sbjct: 1622 VPTAAPRN-VVVHGATATQLDVTWEPPPLDSQNGDIQGYKIYFWEAQRGNLTERVKTLFL 1680

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E++  ++      +     V AFN A +GP S      T +  P    S++   L +++
Sbjct: 1681 AENSV-KLKNLTGYTAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSAPSSVKFSELTTTS 1739

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNG+L GY++ Y+
Sbjct: 1740 VNVSWEAPQFPNGILEGYRLVYE 1762



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 138/347 (39%), Gaps = 48/347 (13%)

Query: 379  YTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVID--AKKAVVSWNP----VSPQ 429
            +   AQT   + EA   L V         P +  ++Q  D  A+  ++SW P    +SP 
Sbjct: 1373 FRITAQTRKGWGEAAEALVVTTEKRDRPQPPSRPMVQQEDVRARSVLLSWEPGSDGLSP- 1431

Query: 430  SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
                  R Y +QT     G  ++    V+   S+   VD+  P +    RV A N   + 
Sbjct: 1432 -----VRYYTIQTRELPSGRWALHSASVSHNASSFI-VDRLKPFTSYKFRVKATNDIGDS 1485

Query: 490  PPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQ 542
              SE    +T     P+  P     L   P  +++  ++W  P  ++ NG+L+G++I+Y+
Sbjct: 1486 EFSEESESLTTLQAAPDEAPTI---LSVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYR 1542

Query: 543  SV--KGTKVGPL---------------LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
             +  +G +   L               +  +  +S P+ T  +L  L    +Y I ++ Y
Sbjct: 1543 ELLYEGLRGFTLRGINNPGATWAELTSMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVY 1602

Query: 586  TKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
               G+G  S  + +F    VP   P NV   G+T   L ++W   P    N     Y+I+
Sbjct: 1603 NAVGEGPSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQNGDIQGYKIY 1662

Query: 641  WRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDG 687
            +     G    +   L   ++ + L N   +  Y + V       DG
Sbjct: 1663 FWEAQRGNLTERVKTLFLAENSVKLKNLTGYTAYMVSVAAFNAAGDG 1709



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ V      G   GYKV  + EKD +   R  +V  
Sbjct: 1198 VPSSGPTNVSALATTSSS-MLVRWSEVPEADRNGLVLGYKVM-YKEKDSDTQPRFWLVEG 1255

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1256 NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 1315

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P + Y
Sbjct: 1316 SVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVL----APSARQYTATGLKPESVY 1371

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1372 LFRITAQTRKGWGEAAEAL 1390



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 128/308 (41%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 958  LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGPPTNLGISN---------- 1003

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +   G + E    L++    N+ ++ + EV    P
Sbjct: 1004 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNP 1063

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 1064 FTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTA---SETSLWLRWMPL 1120

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY    G   G  L  +  + D       +  LE  T+YR+ + 
Sbjct: 1121 PEMEYNGNPESVGYKIKYSRSDGH--GKTLSHV--VQDRVEREYTIEDLEEWTEYRVQVQ 1176

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S+ +       VP   P NV    +T +++++ W+ +PE + N     Y+
Sbjct: 1177 AFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYK 1236

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1237 VMYKEKDS 1244


>gi|222352127|ref|NP_001138424.1| protein sidekick-2 precursor [Homo sapiens]
 gi|296452966|sp|Q58EX2.3|SDK2_HUMAN RecName: Full=Protein sidekick-2; Flags: Precursor
          Length = 2172

 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 177/605 (29%), Positives = 256/605 (42%), Gaps = 32/605 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V     +V L C+    PL +   IW KDGV +  S  IS  N  + L I +   S
Sbjct: 222 KNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGVLL--SGGISDHN--RRLTIPNPTGS 277

Query: 98  DQGSYTCEVSNGVGEAKSY--SIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPE 154
           D G Y CE         S      LSVL  P F  EPE  I A  E+ V   C+A G+P 
Sbjct: 278 DAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQFVKEPERHITAEMEKVVDIPCQAKGVPP 337

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
           P I W  +   +        R+     + I  L   DTG + C A N+ G V    Y+ V
Sbjct: 338 PSITWYKDAAVVEVEKLTRFRQRNDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAV 397

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILET 269
            + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T LE+
Sbjct: 398 TSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLES 457

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+  C
Sbjct: 458 GSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVC 517

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
               DP + +  +W +    +  ES PR     + SL ++++   D G YTCR  +    
Sbjct: 518 GVTHDPRVTIRYIWEKDGATLGTESHPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGN 577

Query: 390 IEAQATLTVQVPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
               A L V+    AP +    +  ++ +   ++W    P         Y ++  +E + 
Sbjct: 578 DSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWT--KPFDGNSPLIRYILEM-SENNA 634

Query: 449 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ 508
             ++    V+  ++T+  V   VPA     R+ A N    G  S+    V+    P T  
Sbjct: 635 PWTVLLASVDP-KATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAP 693

Query: 509 SLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT 564
               I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I+D   
Sbjct: 694 PQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRY-CLAGLPVG---YQFKNITDADV 749

Query: 565 TSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLV 619
            +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    +    + 
Sbjct: 750 NNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIR 809

Query: 620 ISWTA 624
            +W A
Sbjct: 810 FTWNA 814



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 179/686 (26%), Positives = 274/686 (39%), Gaps = 79/686 (11%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K Q V+  +   +R  ++  F      P PQ  W +DG  I PS RI+      +L+I  
Sbjct: 120 KHQSVSHGEAAVIRAPRIASF------PQPQVTWFRDGRKIPPSSRIAI-TLENTLVILS 172

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFINAAEEET------- 142
               D G Y  + V++  G+ K S  I L+V  +  P   + P  I   +  +       
Sbjct: 173 TVAPDAGRYYVQAVNDKNGDNKTSQPITLTVENVGGPADPIAPTIIIPPKNTSVVAGTSE 232

Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
           VT EC A+  P  ++H  W  +G  +S    +  R     R+TI N   SD G Y C A 
Sbjct: 233 VTLECVANARPLIKLHIIWKKDGVLLSGGISDHNR-----RLTIPNPTGSDAGYYECEAV 287

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+  V +  Y++VL   P+  + P+   T + + VV + C+  G P P + W  + 
Sbjct: 288 LRSSSVPSVVRGAYLSVL-EPPQFVKEPERHITAEMEKVVDIPCQAKGVPPPSITWYKDA 346

Query: 257 -----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HI 310
                ++LT  R+     G L+I+ +   D+G + CFARN  G  Q S  L V     +I
Sbjct: 347 AVVEVEKLT--RFRQRNDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAVTSIAPNI 404

Query: 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTV 368
           T  P D  V  G S    C     P  + +I W +G   +   S   PRF      SL +
Sbjct: 405 TRGPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTPLESGSLLI 462

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAV-VSWN 424
           + +   D+G YTC A       EA A L V       + P + ++I+   A     V+ +
Sbjct: 463 SPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVCGVTHD 522

Query: 425 P-VSPQSL---RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           P V+ + +    G   G +       D  GS+       G+  T    + + A  N +R 
Sbjct: 523 PRVTIRYIWEKDGATLGTESHPRIRLDRNGSLHISQTWSGDIGTYTC-RVISAGGNDSRS 581

Query: 481 --LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
             L      + P   + +  T E                 A  L W KP   N  L+ Y 
Sbjct: 582 AHLRVRQLPHAPEHPVATLSTVE---------------RRAINLTWTKPFDGNSPLIRYI 626

Query: 539 IKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF 598
           ++  S        LL  +    DP  TS  + GL P+  Y+  L      G G  SK   
Sbjct: 627 LE-MSENNAPWTVLLASV----DPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTE 681

Query: 599 YV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
            V      P   P NV   G T  +++I W   PE   N     Y I +        +  
Sbjct: 682 RVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQF 741

Query: 653 DDVLDWRQSELVLANQPTFQPYEIKV 678
            ++ D   + L+L +   +  YEI+V
Sbjct: 742 KNITDADVNNLLLEDLIIWTNYEIEV 767



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 11/177 (6%)

Query: 422 SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR-- 479
           +WN  SPQ + G  +GYK+  W E + E  +  +        +  V  FV   K F    
Sbjct: 811 TWNAPSPQFINGINQGYKLIAW-EPEQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYF 868

Query: 480 --VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
             VL F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY
Sbjct: 869 TSVLCFTTPGDGPRSTPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGY 928

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           +I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 929 RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 980



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 109/274 (39%), Gaps = 27/274 (9%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           +PYF  EP       E   +   C A G    E  W+HN + +++            R  
Sbjct: 25  SPYFKTEPVRTQVHLEGNRLVLTCMAEGSWPLEFKWLHNNRELTKFSLE-------YRYM 77

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RV 242
           I +L ++  G Y C   N +G + +      +A+     E  K +    G+  V+   R+
Sbjct: 78  ITSLDRTHAGFYRCIVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAAVIRAPRI 137

Query: 243 FGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSG 300
              P+P+V W  + +++    R  I     L I      D+G Y   A N K G  + S 
Sbjct: 138 ASFPQPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQ 197

Query: 301 --SLTVKEHTHITD--------QPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEP 349
             +LTV+      D         P++  V AG S  T  C A + P +KL I+W +    
Sbjct: 198 PITLTVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGVL 257

Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +        +  ++  LT+   +  D+G Y C A
Sbjct: 258 LSGG-----ISDHNRRLTIPNPTGSDAGYYECEA 286



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N  ++    A +  V+W P    S  G  +GYK+  W  + G  + R   +  
Sbjct: 1622 VPTAAPRNV-VVHGATATQLDVTWEPPPLDSQNGDIQGYKIYFWEAQRGNLTERVKTLFL 1680

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E++  ++      +     V AFN A +GP S      T +  P    S++   L +++
Sbjct: 1681 AENSV-KLKNLTGYTAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSAPSSVKFSELTTTS 1739

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNG+L GY++ Y+
Sbjct: 1740 VNVSWEAPQFPNGILEGYRLVYE 1762



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 138/347 (39%), Gaps = 48/347 (13%)

Query: 379  YTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVID--AKKAVVSWNP----VSPQ 429
            +   AQT   + EA   L V         P +  ++Q  D  A+  ++SW P    +SP 
Sbjct: 1373 FRITAQTRKGWGEAAEALVVTTEKRDRPQPPSRPMVQQEDVRARSVLLSWEPGSDGLSP- 1431

Query: 430  SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
                  R Y +QT     G  ++    V+   S+   VD+  P +    RV A N   + 
Sbjct: 1432 -----VRYYTIQTRELPSGRWALHSASVSHNASSFI-VDRLKPFTSYKFRVKATNDIGDS 1485

Query: 490  PPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQ 542
              SE    +T     P+  P     L   P  +++  ++W  P  ++ NG+L+G++I+Y+
Sbjct: 1486 EFSEESESLTTLQAAPDEAPTI---LSVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYR 1542

Query: 543  SV--KGTKVGPL---------------LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
             +  +G +   L               +  +  +S P+ T  +L  L    +Y I ++ Y
Sbjct: 1543 ELLYEGLRGFTLRGINNPGATWAELTSMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVY 1602

Query: 586  TKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
               G+G  S  + +F    VP   P NV   G+T   L ++W   P    N     Y+I+
Sbjct: 1603 NAVGEGPSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQNGDIQGYKIY 1662

Query: 641  WRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDG 687
            +     G    +   L   ++ + L N   +  Y + V       DG
Sbjct: 1663 FWEAQRGNLTERVKTLFLAENSVKLKNLTGYTAYMVSVAAFNAAGDG 1709



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ V      G   GYKV  + EKD +   R  +V  
Sbjct: 1198 VPSSGPTNVSALATTSSS-MLVRWSEVPEADRNGLVLGYKVM-YKEKDSDTQPRFWLVEG 1255

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1256 NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 1315

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P + Y
Sbjct: 1316 SVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVL----APSARQYTATGLKPESVY 1371

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1372 LFRITAQTRKGWGEAAEAL 1390



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 128/308 (41%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 958  LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGPPTNLGISN---------- 1003

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +   G + E    L++    N+ ++ + EV    P
Sbjct: 1004 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNP 1063

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 1064 FTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTA---SETSLWLRWMPL 1120

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY    G   G  L  +  + D       +  LE  T+YR+ + 
Sbjct: 1121 PEMEYNGNPESVGYKIKYSRSDGH--GKTLSHV--VQDRVERDYTIEDLEEWTEYRVQVQ 1176

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S+ +       VP   P NV    +T +++++ W+ +PE + N     Y+
Sbjct: 1177 AFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYK 1236

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1237 VMYKEKDS 1244


>gi|426346933|ref|XP_004041123.1| PREDICTED: protein sidekick-2 [Gorilla gorilla gorilla]
          Length = 2172

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 176/605 (29%), Positives = 256/605 (42%), Gaps = 32/605 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V     +V L C+    PL +   IW KDGV +  S  IS  N  + L I +   S
Sbjct: 222 KNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGVLL--SGGISDHN--RRLTIPNPTGS 277

Query: 98  DQGSYTCEVSNGVGEAKSY--SIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPE 154
           D G Y CE         S      LSVL  P F  EPE  I A  E+ V   C+A G+P 
Sbjct: 278 DAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQFVKEPERHITAEMEKVVDIPCRAKGVPP 337

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
           P I W  +   +        R+     + +  L   DTG + C A N+ G V    Y+ V
Sbjct: 338 PSITWYKDAAVVEVEKLTRFRQRSDGGLQVSGLVPDDTGMFQCFARNAAGEVQTSTYLAV 397

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILET 269
            + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T LE+
Sbjct: 398 TSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLES 457

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+  C
Sbjct: 458 GSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVC 517

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
               DP + +  +W +    +  ES PR     + SL ++++   D G YTCR  +    
Sbjct: 518 GVTHDPRVTIRYIWEKDGATLGTESHPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGN 577

Query: 390 IEAQATLTVQVPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
               A L V+    AP +    +  ++ +   ++W    P         Y ++  +E + 
Sbjct: 578 DSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWT--KPFDGNSPLIRYILEM-SENNA 634

Query: 449 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ 508
             ++    V+  ++T+  V   VPA     R+ A N    G  S+    V+    P T  
Sbjct: 635 PWTVLLASVDP-KATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAP 693

Query: 509 SLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT 564
               I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I+D   
Sbjct: 694 PQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRY-CLAGLPVG---YQFKNITDADV 749

Query: 565 TSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLV 619
            +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    +    + 
Sbjct: 750 NNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIR 809

Query: 620 ISWTA 624
            +W A
Sbjct: 810 FTWNA 814



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 179/686 (26%), Positives = 274/686 (39%), Gaps = 79/686 (11%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K Q V+  +   +R  ++  F      P PQ  W +DG  I PS RI+      +L+I  
Sbjct: 120 KHQSVSHGEAAVIRAPRIASF------PQPQVTWFRDGRKIPPSSRIAI-TLENTLVILS 172

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFINAAEEET------- 142
               D G Y  + V++  G+ K S  I L+V  +  P   + P  I   +  +       
Sbjct: 173 TVAPDAGRYYVQAVNDKNGDNKTSQPITLTVENVGGPADPIAPTIIIPPKNTSVVAGTSE 232

Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
           VT EC A+  P  ++H  W  +G  +S    +  R     R+TI N   SD G Y C A 
Sbjct: 233 VTLECVANARPLIKLHIIWKKDGVLLSGGISDHNR-----RLTIPNPTGSDAGYYECEAV 287

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+  V +  Y++VL   P+  + P+   T + + VV + CR  G P P + W  + 
Sbjct: 288 LRSSSVPSVVRGAYLSVL-EPPQFVKEPERHITAEMEKVVDIPCRAKGVPPPSITWYKDA 346

Query: 257 -----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHI 310
                ++LT  R+     G L+++ +   D+G + CFARN  G  Q S  L V     +I
Sbjct: 347 AVVEVEKLT--RFRQRSDGGLQVSGLVPDDTGMFQCFARNAAGEVQTSTYLAVTSIAPNI 404

Query: 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTV 368
           T  P D  V  G S    C     P  + +I W +G   +   S   PRF      SL +
Sbjct: 405 TRGPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTPLESGSLLI 462

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAV-VSWN 424
           + +   D+G YTC A       EA A L V       + P + ++I+   A     V+ +
Sbjct: 463 SPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVCGVTHD 522

Query: 425 P-VSPQSL---RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           P V+ + +    G   G +       D  GS+       G+  T    + + A  N +R 
Sbjct: 523 PRVTIRYIWEKDGATLGTESHPRIRLDRNGSLHISQTWSGDIGTYTC-RVISAGGNDSRS 581

Query: 481 --LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
             L      + P   + +  T E                 A  L W KP   N  L+ Y 
Sbjct: 582 AHLRVRQLPHAPEHPVATLSTVE---------------RRAINLTWTKPFDGNSPLIRYI 626

Query: 539 IKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF 598
           ++  S        LL  +    DP  TS  + GL P+  Y+  L      G G  SK   
Sbjct: 627 LE-MSENNAPWTVLLASV----DPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTE 681

Query: 599 YV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
            V      P   P NV   G T  +++I W   PE   N     Y I +        +  
Sbjct: 682 RVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQF 741

Query: 653 DDVLDWRQSELVLANQPTFQPYEIKV 678
            ++ D   + L+L +   +  YEI+V
Sbjct: 742 KNITDADVNNLLLEDLIIWTNYEIEV 767



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 109/274 (39%), Gaps = 27/274 (9%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           +PYF  EP       E   +   C A G    E  W+HN + +++            R  
Sbjct: 25  SPYFKTEPVRTQVHLEGNRLVLTCMAEGSWPLEFKWLHNNRELTKFSLE-------YRYM 77

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RV 242
           I +L ++  G Y C   N +G + +      +A+     E  K +    G+  V+   R+
Sbjct: 78  ITSLDRTHAGFYRCIVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAAVIRAPRI 137

Query: 243 FGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSG 300
              P+P+V W  + +++    R  I     L I      D+G Y   A N K G  + S 
Sbjct: 138 ASFPQPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQ 197

Query: 301 --SLTVKEHTHITD--------QPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEP 349
             +LTV+      D         P++  V AG S  T  C A + P +KL I+W +    
Sbjct: 198 PITLTVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGVL 257

Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +        +  ++  LT+   +  D+G Y C A
Sbjct: 258 LSGG-----ISDHNRRLTIPNPTGSDAGYYECEA 286



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 11/177 (6%)

Query: 422 SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR-- 479
           +WN  SPQ + G  +GYK+  W E + E  +  +        +  V  FV   K F    
Sbjct: 811 TWNAPSPQFINGINQGYKLIAW-EPEQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYF 868

Query: 480 --VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
             VL F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY
Sbjct: 869 TSVLCFTTPGDGPRSTPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGY 928

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           +I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 929 RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 980



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N  ++    A +  V+W P    S  G  +GYK+  W  + G  + R   +  
Sbjct: 1622 VPTAAPRN-VVVHGATATQLDVTWEPPPLDSQNGDIQGYKIYFWEAQRGNLTERVKTLFL 1680

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E++  ++      +     V AFN A +GP S      T +  P    S++   L +++
Sbjct: 1681 AENSV-KLKNLTGYTAYVVSVAAFNAAGDGPRSTPTQGQTQQAAPSAPSSVKFSELTTTS 1739

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNG+L GY++ Y+
Sbjct: 1740 VNVSWEAPQFPNGILEGYRLVYE 1762



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 138/347 (39%), Gaps = 48/347 (13%)

Query: 379  YTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVID--AKKAVVSWNP----VSPQ 429
            +   AQT   + EA   L V         P +  ++Q  D  A+  ++SW P    +SP 
Sbjct: 1373 FRITAQTRKGWGEAAEALVVTTEKRDRPQPPSRPMVQQEDVRARSVLLSWEPGSDGLSP- 1431

Query: 430  SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
                  R Y +QT     G  ++    V+   S+   VD+  P +    RV A N   + 
Sbjct: 1432 -----VRYYTIQTRELPGGRWALHSASVSHNASSFV-VDRLKPFTSYKFRVKATNDIGDS 1485

Query: 490  PPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQ 542
              SE    +T     P+  P     L   P  +++  ++W  P  ++ NG+L+G++I+Y+
Sbjct: 1486 EFSEESESLTTLQAAPDEAPTI---LSVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYR 1542

Query: 543  SV--KGTKVGPL---------------LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
             +  +G +   L               +  +  +S P+ T  +L  L    +Y I ++ Y
Sbjct: 1543 ELLYEGLRGFTLRGINNPGATWAELTSMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVY 1602

Query: 586  TKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
               G+G  S  + +F    VP   P NV   G+T   L ++W   P    N     Y+I+
Sbjct: 1603 NAVGEGPSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQNGDIQGYKIY 1662

Query: 641  WRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDG 687
            +     G    +   L   ++ + L N   +  Y + V       DG
Sbjct: 1663 FWEAQRGNLTERVKTLFLAENSVKLKNLTGYTAYVVSVAAFNAAGDG 1709



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 129/308 (41%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 958  LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGPPTNLGISN---------- 1003

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +   G + E    L++    N+ ++ + EV    P
Sbjct: 1004 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNP 1063

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 1064 FTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTA---SETSLWLRWMPL 1120

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY    G   G +L  +  + D       +  LE  T+YR+ + 
Sbjct: 1121 PEMEYNGNPESVGYKIKYSRSDGH--GKMLSHV--VQDRVEREYTIEDLEEWTEYRVQVQ 1176

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S+ +       VP   P NV    +T +++++ W+ +PE + N     Y+
Sbjct: 1177 AFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYK 1236

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1237 VMYKEKDS 1244



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ V      G   GYKV  + EKD +   R  +V  
Sbjct: 1198 VPSSGPTNVSALATTSSS-MLVRWSEVPEADRNGLVLGYKVM-YKEKDSDTQPRFWLVEG 1255

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1256 NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 1315

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+        L+P + Y
Sbjct: 1316 SVRLIWQPPATPNGIILAYQITHRLNTTTANTATVEVL----APSARQYTATSLKPESVY 1371

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1372 LFRITAQTRKGWGEAAEAL 1390


>gi|119609532|gb|EAW89126.1| sidekick homolog 2 (chicken), isoform CRA_a [Homo sapiens]
          Length = 2086

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 177/605 (29%), Positives = 256/605 (42%), Gaps = 32/605 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V     +V L C+    PL +   IW KDGV +  S  IS  N  + L I +   S
Sbjct: 91  KNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGVLL--SGGISDHN--RRLTIPNPTGS 146

Query: 98  DQGSYTCEVSNGVGEAKSY--SIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPE 154
           D G Y CE         S      LSVL  P F  EPE  I A  E+ V   C+A G+P 
Sbjct: 147 DAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQFVKEPERHITAEMEKVVDIPCQAKGVPP 206

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
           P I W  +   +        R+     + I  L   DTG + C A N+ G V    Y+ V
Sbjct: 207 PSITWYKDAAVVEVEKLTRFRQRNDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAV 266

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILET 269
            + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T LE+
Sbjct: 267 TSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLES 326

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+  C
Sbjct: 327 GSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVC 386

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
               DP + +  +W +    +  ES PR     + SL ++++   D G YTCR  +    
Sbjct: 387 GVTHDPRVTIRYIWEKDGATLGTESHPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGN 446

Query: 390 IEAQATLTVQVPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
               A L V+    AP +    +  ++ +   ++W    P         Y ++  +E + 
Sbjct: 447 DSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWT--KPFDGNSPLIRYILEM-SENNA 503

Query: 449 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ 508
             ++    V+  ++T+  V   VPA     R+ A N    G  S+    V+    P T  
Sbjct: 504 PWTVLLASVDP-KATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAP 562

Query: 509 SLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT 564
               I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I+D   
Sbjct: 563 PQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRY-CLAGLPVG---YQFKNITDADV 618

Query: 565 TSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLV 619
            +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    +    + 
Sbjct: 619 NNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIR 678

Query: 620 ISWTA 624
            +W A
Sbjct: 679 FTWNA 683



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 147/566 (25%), Positives = 224/566 (39%), Gaps = 61/566 (10%)

Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
           VT EC A+  P  ++H  W  +G  +S    +  R     R+TI N   SD G Y C A 
Sbjct: 102 VTLECVANARPLIKLHIIWKKDGVLLSGGISDHNR-----RLTIPNPTGSDAGYYECEAV 156

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+  V +  Y++VL   P+  + P+   T + + VV + C+  G P P + W  + 
Sbjct: 157 LRSSSVPSVVRGAYLSVL-EPPQFVKEPERHITAEMEKVVDIPCQAKGVPPPSITWYKDA 215

Query: 257 -----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HI 310
                ++LT  R+     G L+I+ +   D+G + CFARN  G  Q S  L V     +I
Sbjct: 216 AVVEVEKLT--RFRQRNDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAVTSIAPNI 273

Query: 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTV 368
           T  P D  V  G S    C     P  + +I W +G   +   S   PRF      SL +
Sbjct: 274 TRGPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTPLESGSLLI 331

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPL---EAPSNFTLIQVIDAKKAV-VSWN 424
           + +   D+G YTC A       EA A L V       + P + ++I+   A     V+ +
Sbjct: 332 SPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVCGVTHD 391

Query: 425 P-VSPQSL---RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           P V+ + +    G   G +       D  GS+       G+  T    + + A  N +R 
Sbjct: 392 PRVTIRYIWEKDGATLGTESHPRIRLDRNGSLHISQTWSGDIGTYTC-RVISAGGNDSRS 450

Query: 481 --LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
             L      + P   + +  T E                 A  L W KP   N  L+ Y 
Sbjct: 451 AHLRVRQLPHAPEHPVATLSTVE---------------RRAINLTWTKPFDGNSPLIRYI 495

Query: 539 IKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF 598
           ++          P    L  + DP  TS  + GL P+  Y+  L      G G  SK   
Sbjct: 496 LEMSENNA----PWTVLLASV-DPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTE 550

Query: 599 YV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
            V      P   P NV   G T  +++I W   PE   N     Y I +        +  
Sbjct: 551 RVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQF 610

Query: 653 DDVLDWRQSELVLANQPTFQPYEIKV 678
            ++ D   + L+L +   +  YEI+V
Sbjct: 611 KNITDADVNNLLLEDLIIWTNYEIEV 636



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 11/177 (6%)

Query: 422 SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR-- 479
           +WN  SPQ + G  +GYK+  W E + E  +  +        +  V  FV   K F    
Sbjct: 680 TWNAPSPQFINGINQGYKLIAW-EPEQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYF 737

Query: 480 --VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
             VL F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY
Sbjct: 738 TSVLCFTTPGDGPRSTPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGY 797

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           +I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 798 RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 849



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N  ++    A +  V+W P    S  G  +GYK+  W  + G  + R   +  
Sbjct: 1491 VPTAAPRNV-VVHGATATQLDVTWEPPPLDSQNGDIQGYKIYFWEAQRGNLTERVKTLFL 1549

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E++  ++      +     V AFN A +GP S      T +  P    S++   L +++
Sbjct: 1550 AENSV-KLKNLTGYTAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSAPSSVKFSELTTTS 1608

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNG+L GY++ Y+
Sbjct: 1609 VNVSWEAPQFPNGILEGYRLVYE 1631



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 138/347 (39%), Gaps = 48/347 (13%)

Query: 379  YTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVID--AKKAVVSWNP----VSPQ 429
            +   AQT   + EA   L V         P +  ++Q  D  A+  ++SW P    +SP 
Sbjct: 1242 FRITAQTRKGWGEAAEALVVTTEKRDRPQPPSRPMVQQEDVRARSVLLSWEPGSDGLSP- 1300

Query: 430  SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
                  R Y +QT     G  ++    V+   S+   VD+  P +    RV A N   + 
Sbjct: 1301 -----VRYYTIQTRELPSGRWALHSASVSHNASSFI-VDRLKPFTSYKFRVKATNDIGDS 1354

Query: 490  PPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQ 542
              SE    +T     P+  P     L   P  +++  ++W  P  ++ NG+L+G++I+Y+
Sbjct: 1355 EFSEESESLTTLQAAPDEAPTI---LSVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYR 1411

Query: 543  SV--KGTKVGPL---------------LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
             +  +G +   L               +  +  +S P+ T  +L  L    +Y I ++ Y
Sbjct: 1412 ELLYEGLRGFTLRGINNPGATWAELTSMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVY 1471

Query: 586  TKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
               G+G  S  + +F    VP   P NV   G+T   L ++W   P    N     Y+I+
Sbjct: 1472 NAVGEGPSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQNGDIQGYKIY 1531

Query: 641  WRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDG 687
            +     G    +   L   ++ + L N   +  Y + V       DG
Sbjct: 1532 FWEAQRGNLTERVKTLFLAENSVKLKNLTGYTAYMVSVAAFNAAGDG 1578



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ V      G   GYKV  + EKD +   R  +V  
Sbjct: 1067 VPSSGPTNVSALATTSSS-MLVRWSEVPEADRNGLVLGYKVM-YKEKDSDTQPRFWLVEG 1124

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1125 NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 1184

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P + Y
Sbjct: 1185 SVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVL----APSARQYTATGLKPESVY 1240

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1241 LFRITAQTRKGWGEAAEAL 1259



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 128/308 (41%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 827  LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGPPTNLGISN---------- 872

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +   G + E    L++    N+ ++ + EV    P
Sbjct: 873  IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNP 932

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 933  FTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTA---SETSLWLRWMPL 989

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY    G   G  L  +  + D       +  LE  T+YR+ + 
Sbjct: 990  PEMEYNGNPESVGYKIKYSRSDGH--GKTLSHV--VQDRVERDYTIEDLEEWTEYRVQVQ 1045

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S+ +       VP   P NV    +T +++++ W+ +PE + N     Y+
Sbjct: 1046 AFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYK 1105

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1106 VMYKEKDS 1113


>gi|119609535|gb|EAW89129.1| sidekick homolog 2 (chicken), isoform CRA_d [Homo sapiens]
          Length = 1790

 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 177/605 (29%), Positives = 256/605 (42%), Gaps = 32/605 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V     +V L C+    PL +   IW KDGV +  S  IS  N  + L I +   S
Sbjct: 91  KNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGVLL--SGGISDHN--RRLTIPNPTGS 146

Query: 98  DQGSYTCEVSNGVGEAKSY--SIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPE 154
           D G Y CE         S      LSVL  P F  EPE  I A  E+ V   C+A G+P 
Sbjct: 147 DAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQFVKEPERHITAEMEKVVDIPCQAKGVPP 206

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
           P I W  +   +        R+     + I  L   DTG + C A N+ G V    Y+ V
Sbjct: 207 PSITWYKDAAVVEVEKLTRFRQRNDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAV 266

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILET 269
            + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T LE+
Sbjct: 267 TSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLES 326

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+  C
Sbjct: 327 GSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVC 386

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
               DP + +  +W +    +  ES PR     + SL ++++   D G YTCR  +    
Sbjct: 387 GVTHDPRVTIRYIWEKDGATLGTESHPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGN 446

Query: 390 IEAQATLTVQVPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
               A L V+    AP +    +  ++ +   ++W    P         Y ++  +E + 
Sbjct: 447 DSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWT--KPFDGNSPLIRYILEM-SENNA 503

Query: 449 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ 508
             ++    V+  ++T+  V   VPA     R+ A N    G  S+    V+    P T  
Sbjct: 504 PWTVLLASVDP-KATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAP 562

Query: 509 SLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT 564
               I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I+D   
Sbjct: 563 PQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRY-CLAGLPVG---YQFKNITDADV 618

Query: 565 TSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLV 619
            +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    +    + 
Sbjct: 619 NNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIR 678

Query: 620 ISWTA 624
            +W A
Sbjct: 679 FTWNA 683



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 147/566 (25%), Positives = 224/566 (39%), Gaps = 61/566 (10%)

Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
           VT EC A+  P  ++H  W  +G  +S    +  R     R+TI N   SD G Y C A 
Sbjct: 102 VTLECVANARPLIKLHIIWKKDGVLLSGGISDHNR-----RLTIPNPTGSDAGYYECEAV 156

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+  V +  Y++VL   P+  + P+   T + + VV + C+  G P P + W  + 
Sbjct: 157 LRSSSVPSVVRGAYLSVL-EPPQFVKEPERHITAEMEKVVDIPCQAKGVPPPSITWYKDA 215

Query: 257 -----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHI 310
                ++LT  R+     G L+I+ +   D+G + CFARN  G  Q S  L V     +I
Sbjct: 216 AVVEVEKLT--RFRQRNDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAVTSIAPNI 273

Query: 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTV 368
           T  P D  V  G S    C     P  + +I W +G   +   S   PRF      SL +
Sbjct: 274 TRGPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTPLESGSLLI 331

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPL---EAPSNFTLIQVIDAKKAV-VSWN 424
           + +   D+G YTC A       EA A L V       + P + ++I+   A     V+ +
Sbjct: 332 SPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVCGVTHD 391

Query: 425 P-VSPQSL---RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           P V+ + +    G   G +       D  GS+       G+  T    + + A  N +R 
Sbjct: 392 PRVTIRYIWEKDGATLGTESHPRIRLDRNGSLHISQTWSGDIGTYTC-RVISAGGNDSRS 450

Query: 481 --LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
             L      + P   + +  T E                 A  L W KP   N  L+ Y 
Sbjct: 451 AHLRVRQLPHAPEHPVATLSTVE---------------RRAINLTWTKPFDGNSPLIRYI 495

Query: 539 IKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF 598
           ++          P    L  + DP  TS  + GL P+  Y+  L      G G  SK   
Sbjct: 496 LEMSENNA----PWTVLLASV-DPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTE 550

Query: 599 YV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
            V      P   P NV   G T  +++I W   PE   N     Y I +        +  
Sbjct: 551 RVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQF 610

Query: 653 DDVLDWRQSELVLANQPTFQPYEIKV 678
            ++ D   + L+L +   +  YEI+V
Sbjct: 611 KNITDADVNNLLLEDLIIWTNYEIEV 636



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 147/588 (25%), Positives = 227/588 (38%), Gaps = 70/588 (11%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEV 106
           V L C   G P P   W K G  I  S  +    +      SL+I     SD G+YTC  
Sbjct: 288 VVLACETSGAPRPAITWQK-GERILASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLA 346

Query: 107 SN--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--WVHN 162
           +N  GV EA   S DL V A    T  P+  +  +    +  C  +  P   I   W  +
Sbjct: 347 TNSRGVDEA---SADLVVWARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTIRYIWEKD 403

Query: 163 GKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAP 219
           G  +     +PR ++  N  + I      D G Y C   ++ G   +  ++ V  L HAP
Sbjct: 404 GATLGTES-HPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAP 462

Query: 220 EITEAPKDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVA 278
           E   A     TV+ + + LT  + F    P + +I    E       +L + D K T V 
Sbjct: 463 EHPVATLS--TVERRAINLTWTKPFDGNSPLIRYILEMSENNAPWTVLLASVDPKATSVT 520

Query: 279 F-----ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS--ATFRCN- 330
                 A S ++   A N +G  Q S      + T     PE+      Q+  A+ R N 
Sbjct: 521 VKGLVPARSYQFRLCAVNDVGKGQFS------KDTERVSLPEEPPTAPPQNVIASGRTNQ 574

Query: 331 -----------AVSDPSLKLSIV-WLRGSEPIDFESEPRFVQSNDYS------LTVTKSS 372
                      +  +  LK  I+ +     P+ ++   + +   D +      L +  + 
Sbjct: 575 SIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQF--KNITDADVNNLLLEDLIIWTNY 632

Query: 373 ELDSGQYTCRAQTELDFIEAQAT-LTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQS 430
           E++   Y       L    ++ T  T+Q VP   P N    +  ++     +WN  SPQ 
Sbjct: 633 EIEVAAYNSAG---LGVYSSKVTEWTLQGVPTVPPGNVH-AEATNSTTIRFTWNAPSPQF 688

Query: 431 LRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR----VLAFNGA 486
           + G  +GYK+  W E + E  +  +        +  V  FV   K F      VL F   
Sbjct: 689 INGINQGYKLIAW-EPEQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYFTSVLCFTTP 746

Query: 487 YNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKG 546
            +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY+I ++    
Sbjct: 747 GDGPRSTPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNR 806

Query: 547 TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 807 TNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 849



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N  ++    A +  V+W P    S  G  +GYK+  W  + G  + R   +  
Sbjct: 1491 VPTAAPRNV-VVHGATATQLDVTWEPPPLDSQNGDIQGYKIYFWEAQRGNLTERVKTLFL 1549

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E++  ++      +     V AFN A +GP S      T +  P    S++   L +++
Sbjct: 1550 AENSV-KLKNLTGYTAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSAPSSVKFSELTTTS 1608

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNG+L GY++ Y+
Sbjct: 1609 VNVSWEAPQFPNGILEGYRLVYE 1631



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 138/347 (39%), Gaps = 48/347 (13%)

Query: 379  YTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVID--AKKAVVSWNP----VSPQ 429
            +   AQT   + EA   L V         P +  ++Q  D  A+  ++SW P    +SP 
Sbjct: 1242 FRITAQTRKGWGEAAEALVVTTEKRDRPQPPSRPMVQQEDVRARSVLLSWEPGSDGLSP- 1300

Query: 430  SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
                  R Y +QT     G  ++    V+   S+   VD+  P +    RV A N   + 
Sbjct: 1301 -----VRYYTIQTRELPSGRWALHSASVSHNASSFI-VDRLKPFTSYKFRVKATNDIGDS 1354

Query: 490  PPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQ 542
              SE    +T     P+  P     L   P  +++  ++W  P  ++ NG+L+G++I+Y+
Sbjct: 1355 EFSEESESLTTLQAAPDEAPTI---LSVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYR 1411

Query: 543  SV--KGTKVGPL---------------LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
             +  +G +   L               +  +  +S P+ T  +L  L    +Y I ++ Y
Sbjct: 1412 ELLYEGLRGFTLRGINNPGATWAELTSMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVY 1471

Query: 586  TKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
               G+G  S  + +F    VP   P NV   G+T   L ++W   P    N     Y+I+
Sbjct: 1472 NAVGEGPSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQNGDIQGYKIY 1531

Query: 641  WRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDG 687
            +     G    +   L   ++ + L N   +  Y + V       DG
Sbjct: 1532 FWEAQRGNLTERVKTLFLAENSVKLKNLTGYTAYMVSVAAFNAAGDG 1578



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ V      G   GYKV  + EKD +   R  +V  
Sbjct: 1067 VPSSGPTNVSALATTSSS-MLVRWSEVPEADRNGLVLGYKVM-YKEKDSDTQPRFWLVEG 1124

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1125 NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 1184

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P + Y
Sbjct: 1185 SVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVL----APSARQYTATGLKPESVY 1240

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1241 LFRITAQTRKGWGEAAEAL 1259



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 128/308 (41%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 827  LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGPPTNLGISN---------- 872

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +   G + E    L++    N+ ++ + EV    P
Sbjct: 873  IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNP 932

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 933  FTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTA---SETSLWLRWMPL 989

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY    G   G  L  +  + D       +  LE  T+YR+ + 
Sbjct: 990  PEMEYNGNPESVGYKIKYSRSDGH--GKTLSHV--VQDRVERDYTIEDLEEWTEYRVQVQ 1045

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S+ +       VP   P NV    +T +++++ W+ +PE + N     Y+
Sbjct: 1046 AFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYK 1105

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1106 VMYKEKDS 1113


>gi|354467816|ref|XP_003496364.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-1-like [Cricetulus
           griseus]
          Length = 2126

 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 182/622 (29%), Positives = 269/622 (43%), Gaps = 38/622 (6%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQT--IWSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
           + V   + +  L CI    P+ +    W ++GV      R++ G  ++G+ L I +   +
Sbjct: 212 RSVVAGSSETTLECIANARPVEELSLYWKRNGV------RLTSGLHSFGRRLTISNPTSA 265

Query: 98  DQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPE 154
           D G Y CE +      E       LS++  PYFT EPE  I    EE+V   C+A G+P 
Sbjct: 266 DTGLYVCEATLRGSTFEPARAKAFLSIIEPPYFTAEPESRILGEVEESVDIPCRAMGVPL 325

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P + W  +  P+++   N R +V P+  + I+ L   D+G + C A N  G +    Y++
Sbjct: 326 PTLQWYKDAVPLNKLQ-NLRYRVLPSGSLHIQKLSPEDSGIFQCFANNEGGEIQTHTYLD 384

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V   AP  T+ P D    DG T VL C V GAPKP + W      L  G     R+ +LE
Sbjct: 385 VTNIAPAFTQRPVDTTVTDGMTAVLKCEVSGAPKPAITWKRGNLILASGSVRIPRFMLLE 444

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L+I  V   D+G YTC+A N   +   S  LTV   T I   PED  V  G +AT  
Sbjct: 445 SGGLRIAPVFIQDAGNYTCYAANTEASVNASAMLTVWNRTSIVHPPEDRVVIKGTTATLC 504

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A  DP   L  VW + +  I   S  R V   D SL ++++   D G YTC   +E  
Sbjct: 505 CGATHDPRTTLRYVWKKDNMVITPSSSSRIVVEKDGSLLISQTWSGDIGDYTCEIVSEGG 564

Query: 389 FIEAQATL-TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
                A L  +++P    +    +  + +    +SW  V P         Y VQ  +E +
Sbjct: 565 NDSRTARLEVIELPHPPQNLLASLSPVHSHSVTLSW--VRPFDGNSPVLYYIVQL-SENN 621

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGT 506
               +    V+  E T   V    PA     RV A N    G  S E    + PE  P  
Sbjct: 622 SPWKVHLSNVSP-EMTGITVSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSA 680

Query: 507 -VQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
             +++ A    + +  ++W  P +   NGVL GY ++Y+ + G    P   +   IS P 
Sbjct: 681 PPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYR-LAGL---PGEHQQRNISSPE 736

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEGRGSTPNNL 618
                +  L   T+Y I +A Y  AG G  S+      L  VP   P NV+        +
Sbjct: 737 VNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQAEAVNSTTV 796

Query: 619 VISWTAMPEIEHNAPHFKYRIF 640
              W   P+   N  +  Y++ 
Sbjct: 797 HFLWNPPPQQFINGINQGYKLL 818



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 170/686 (24%), Positives = 272/686 (39%), Gaps = 80/686 (11%)

Query: 35  QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV 94
           Q+    +   AL N    + C     P PQ  W ++G  I PS RI+       L+I   
Sbjct: 108 QRKTVSQGHAALLNLVPIISC-----PRPQVTWFREGHKIIPSSRIAI-TLENQLVILAT 161

Query: 95  EFSDQGSYTCEVSNGV-GEAK-SYSIDLSV--------LAAPYFTVEP--EFINAAEEET 142
           + SD G+Y  +  N   GE K S  I LS+          AP   V P    + A   ET
Sbjct: 162 KASDAGAYYVQAVNERNGENKTSPFIHLSIARDTGTPEAMAPVIVVAPGNRSVVAGSSET 221

Query: 143 VTFECKASGLP--EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
            T EC A+  P  E  ++W  NG  ++    +  R     R+TI N   +DTG Y C AT
Sbjct: 222 -TLECIANARPVEELSLYWKRNGVRLTSGLHSFGR-----RLTISNPTSADTGLYVCEAT 275

Query: 201 ---NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ 256
              ++        +++++   P  T  P+     +  ++V + CR  G P P + W  + 
Sbjct: 276 LRGSTFEPARAKAFLSII-EPPYFTAEPESRILGEVEESVDIPCRAMGVPLPTLQWYKDA 334

Query: 257 ---KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHITD 312
               +L   RY +L +G L I  ++  DSG + CFA N+ G  Q    L V       T 
Sbjct: 335 VPLNKLQNLRYRVLPSGSLHIQKLSPEDSGIFQCFANNEGGEIQTHTYLDVTNIAPAFTQ 394

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTK 370
           +P D  V  G +A  +C     P  K +I W RG+  +   S   PRF+      L +  
Sbjct: 395 RPVDTTVTDGMTAVLKCEVSGAP--KPAITWKRGNLILASGSVRIPRFMLLESGGLRIAP 452

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTV---QVPLEAPSNFTLIQVIDAKKAV-VSWNPV 426
               D+G YTC A      + A A LTV      +  P +  +I+   A      + +P 
Sbjct: 453 VFIQDAGNYTCYAANTEASVNASAMLTVWNRTSIVHPPEDRVVIKGTTATLCCGATHDPR 512

Query: 427 SPQSLRGHFRGYKV--------QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFA 478
           +  +LR  ++   +        +   EKDG   I +         T E+          A
Sbjct: 513 T--TLRYVWKKDNMVITPSSSSRIVVEKDGSLLISQTWSGDIGDYTCEIVSEGGNDSRTA 570

Query: 479 RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
           R+      +  PP  +++ ++              P+ S +  L WV+P   N  ++ Y 
Sbjct: 571 RLEVIELPH--PPQNLLASLS--------------PVHSHSVTLSWVRPFDGNSPVLYYI 614

Query: 539 IKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG---AESK 595
           ++          P    L  +S P  T   ++GL P+  Y+  +    + G G    E+ 
Sbjct: 615 VQLSE----NNSPWKVHLSNVS-PEMTGITVSGLTPARTYQFRVCAVNQVGKGQYSTETS 669

Query: 596 YLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
            L      P   P N+   G T  ++++ W   PE EHN     Y + +R         Q
Sbjct: 670 RLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEHQQ 729

Query: 653 DDVLDWRQSELVLANQPTFQPYEIKV 678
            ++     +  ++ +   +  YEI+V
Sbjct: 730 RNISSPEVNYCLVTDLIIWTQYEIQV 755



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 139/604 (23%), Positives = 220/604 (36%), Gaps = 58/604 (9%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-NPSDRISQGNYGKS--LIIKHVEFSDQGSYTCEVSNG 109
           L C   G P P   W +  + + + S RI +    +S  L I  V   D G+YTC  +N 
Sbjct: 409 LKCEVSGAPKPAITWKRGNLILASGSVRIPRFMLLESGGLRIAPVFIQDAGNYTCYAANT 468

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
                + ++ L+V         PE     +  T T  C A+  P   + +V     +   
Sbjct: 469 EASVNASAM-LTVWNRTSIVHPPEDRVVIKGTTATLCCGATHDPRTTLRYVWKKDNMVIT 527

Query: 170 PPNPRRKV--GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKD 227
           P +  R V      + I      D G+Y C   +  G   +   + V+    E+   P++
Sbjct: 528 PSSSSRIVVEKDGSLLISQTWSGDIGDYTCEIVSEGGNDSRTARLEVI----ELPHPPQN 583

Query: 228 EYT----VDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTIL-----ETGDLKITDV 277
                  V   +V L+  R F    P + +I    E        L     E   + ++ +
Sbjct: 584 LLASLSPVHSHSVTLSWVRPFDGNSPVLYYIVQLSENNSPWKVHLSNVSPEMTGITVSGL 643

Query: 278 AFADSGEYTCFARNKLGTAQGS---GSLTVKEHTHITDQPEDYEVEAGQS---------- 324
             A + ++   A N++G  Q S     L + E       P    V +G++          
Sbjct: 644 TPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEP--PSAPPKNIVASGRTNQSIMVQWQP 701

Query: 325 --ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCR 382
              T     +    L+  +  L G       S P         L +    E+    Y   
Sbjct: 702 PPETEHNGVLRGYILRYRLAGLPGEHQQRNISSPEVNYCLVTDLIIWTQYEIQVAAYNGA 761

Query: 383 AQTELDFIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
                 F  A    T+Q VP   P N    + +++      WNP   Q + G  +GYK+ 
Sbjct: 762 GLGV--FSRAVTEYTLQGVPTAPPQNVQ-AEAVNSTTVHFLWNPPPQQFINGINQGYKLL 818

Query: 442 TWTEKDGEG----SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
            W     E     +I            T + KF   +  F  VL F    +GPPS     
Sbjct: 819 AWPADTPETVTVVTIAPDFHGIHHGYITNLKKF---TAYFTSVLCFTTPGDGPPSTPQLV 875

Query: 498 VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLP 557
            T E  PG V  L    +  ++  + W +P + NG++MGY+I ++       G    RL 
Sbjct: 876 WTHEDKPGAVGHLSFTEILDTSLKVSWQEPLERNGIIMGYQISWEV-----YGKNDSRLT 930

Query: 558 YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNN 617
           +  + TT   K+ GL   T Y I +A  T AG G  +     +    P ++ G    P+N
Sbjct: 931 HTLNSTTHEYKIQGLSSLTTYTIDVAAVTAAGVGLTTSST--ISSGVPPDLPG---APSN 985

Query: 618 LVIS 621
           LVIS
Sbjct: 986 LVIS 989



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 8/158 (5%)

Query: 391  EAQATLTVQV------PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWT 444
            E+ A++ V+V      P  AP N   +  + A +  V+W+P  P+S  G+ +GYK+  W 
Sbjct: 1595 ESPASVPVEVFVGEAAPAMAPQNVQ-VTPLTASQLEVTWDPPPPESQNGNIQGYKIYYW- 1652

Query: 445  EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVP 504
            E D      ++ V        ++      +K    + AFN A +GP S+     T +  P
Sbjct: 1653 EADSRNETEKMKVLFLPEPVVKIKNLTSHTKYQVSISAFNAAGDGPKSDPRQGRTHQAAP 1712

Query: 505  GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
            G    L    + S+   + W +P   NG+L GY++ Y+
Sbjct: 1713 GPPSFLAFSEITSTTLNVSWGEPSAANGILQGYRVVYE 1750



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 102/275 (37%), Gaps = 29/275 (10%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           APYF  EP       E   +   C A G    E  W+HN   ++             +  
Sbjct: 13  APYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWIHNDSELTTYSSE-------YKYI 65

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLT-CRV 242
           I +L+K D G Y C   N +G + +      +A+     +  + +    G   +L    +
Sbjct: 66  IPSLQKLDAGFYRCVVRNRMGALLQRKSEVQVAYMGNFMDTDQRKTVSQGHAALLNLVPI 125

Query: 243 FGAPKPEVNWIH-NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNK--------- 292
              P+P+V W     K +   R  I     L I     +D+G Y   A N+         
Sbjct: 126 ISCPRPQVTWFREGHKIIPSSRIAITLENQLVILATKASDAGAYYVQAVNERNGENKTSP 185

Query: 293 ---LGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSE 348
              L  A+ +G+        I   P +  V AG S  T  C A + P  +LS+ W R   
Sbjct: 186 FIHLSIARDTGTPEAMAPV-IVVAPGNRSVVAGSSETTLECIANARPVEELSLYWKRNG- 243

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            +   S    + S    LT++  +  D+G Y C A
Sbjct: 244 -VRLTSG---LHSFGRRLTISNPTSADTGLYVCEA 274



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 12/208 (5%)

Query: 397  TVQVPLE-APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIR 453
            T+Q P + AP++ T ++        + W P+      G+    GY+V+ W   D   S+ 
Sbjct: 1078 TLQAPPDVAPTSIT-VRTASETSLRLRWVPLPDSQYNGNPESVGYRVKYW-RSDQPSSVL 1135

Query: 454  ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEA 512
              +VN        +++    ++   R+ AFN    GP SE++   T E VP    +++ A
Sbjct: 1136 AQVVNDRLERELTIEELEEWTEYELRMQAFNAIGAGPWSELVRGRTRESVPSAAPENVSA 1195

Query: 513  IPLGSSAFYLKWVK-PEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
              + S+   L W   PEQ  NG+++GYKI Y++ K     P   R   +    T SA LA
Sbjct: 1196 EAVSSTQILLTWASVPEQDQNGLILGYKILYRA-KDLDPEP---RSHVVRGNHTQSALLA 1251

Query: 571  GLEPSTKYRIHLAGYTKAGDGAESKYLF 598
            GL     Y + +  +T+ G+G  S  L 
Sbjct: 1252 GLRKFVVYELQVLAFTRIGNGVPSSPLI 1279



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 21/200 (10%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V  Q   G   GYK+  +  KD +   R  +V  
Sbjct: 1185 VPSAAPENVS-AEAVSSTQILLTWASVPEQDQNGLILGYKI-LYRAKDLDPEPRSHVVRG 1242

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNG-PPSEIISFVTPEGVPGTVQSLEAIPLGSS 518
              + +  +           +VLAF    NG P S +I   T +  PG    L    +  +
Sbjct: 1243 NHTQSALLAGLRKFVVYELQVLAFTRIGNGVPSSPLILERTKDDTPGPPVRLVFPEVRLT 1302

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGT-------KVGPLLERLPYISDPTTTSAKLAG 571
            A  + W  PE+PNGV++GY+I Y+  +G+       +VG  + +         T+ +LA 
Sbjct: 1303 AVRIVWQPPEEPNGVILGYQIAYRLARGSPHTFTTVEVGATVRQF--------TATELA- 1353

Query: 572  LEPSTKYRIHLAGYTKAGDG 591
              P + Y   L+  T+ G G
Sbjct: 1354 --PESAYIFRLSAKTRQGWG 1371



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 66/167 (39%), Gaps = 10/167 (5%)

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
           TE    +  ++G  +VLTC   G+   E  WIHN  ELT    T        I  +   D
Sbjct: 18  TEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWIHNDSELT----TYSSEYKYIIPSLQKLD 73

Query: 282 SGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR-CNAVSDPSLKL 339
           +G Y C  RN++G   Q    + V    +  D  +   V  G +A       +S P  + 
Sbjct: 74  AGFYRCVVRNRMGALLQRKSEVQVAYMGNFMDTDQRKTVSQGHAALLNLVPIISCP--RP 131

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
            + W R    I   S       N   +  TK+S  D+G Y  +A  E
Sbjct: 132 QVTWFREGHKIIPSSRIAITLENQLVILATKAS--DAGAYYVQAVNE 176



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 93/233 (39%), Gaps = 31/233 (13%)

Query: 388  DF-IEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV----- 440
            DF  E +A  T+Q VP E P + +      +   ++ W P   +SL G  +GY++     
Sbjct: 1473 DFSAETEAVTTLQDVPGEPPGSVSATPHTTSS-VLIQWQPPRDESLNGLLQGYRIYYREL 1531

Query: 441  --------QTWTEKDGEGSIRELIVNKG----ESTTTEVDKFVPASKNFARVLAFNGAYN 488
                    +  T K       EL          S++T     +   K + R      AYN
Sbjct: 1532 ESEAGMGSEAKTHKSPSALRAELTAQSSFKTVNSSSTLTTYELTHLKKYRRYEVIMTAYN 1591

Query: 489  ----GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKY 541
                 P S  +     E  P    Q+++  PL +S   + W    PE  NG + GYKI Y
Sbjct: 1592 IIGESPASVPVEVFVGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYY 1651

Query: 542  QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
                       ++ L ++ +P     K+  L   TKY++ ++ +  AGDG +S
Sbjct: 1652 WEADSRNETEKMKVL-FLPEPV---VKIKNLTSHTKYQVSISAFNAAGDGPKS 1700



 Score = 39.3 bits (90), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 102/257 (39%), Gaps = 27/257 (10%)

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGTVQ-SLEAIPLGSS 518
            E+T   V++  P +    R+ A N   +   S E  +  T + VPG    S+ A P  +S
Sbjct: 1444 EATACAVERLRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPGSVSATPHTTS 1503

Query: 519  AFYLKWVKP--EQPNGVLMGYKIKYQSVKG---------TKVGPLLERLPYI-------- 559
            +  ++W  P  E  NG+L GY+I Y+ ++          T   P   R            
Sbjct: 1504 SVLIQWQPPRDESLNGLLQGYRIYYRELESEAGMGSEAKTHKSPSALRAELTAQSSFKTV 1563

Query: 560  -SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL-FYV----PFKNPDNVEGRGS 613
             S  T T+ +L  L+   +Y + +  Y   G+   S  +  +V    P   P NV+    
Sbjct: 1564 NSSSTLTTYELTHLKKYRRYEVIMTAYNIIGESPASVPVEVFVGEAAPAMAPQNVQVTPL 1623

Query: 614  TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
            T + L ++W   P    N     Y+I++   ++     +  VL   +  + + N  +   
Sbjct: 1624 TASQLEVTWDPPPPESQNGNIQGYKIYYWEADSRNETEKMKVLFLPEPVVKIKNLTSHTK 1683

Query: 674  YEIKVVQTWTEKDGEGS 690
            Y++ +       DG  S
Sbjct: 1684 YQVSISAFNAAGDGPKS 1700


>gi|402900942|ref|XP_003913419.1| PREDICTED: protein sidekick-2-like, partial [Papio anubis]
          Length = 1482

 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 176/605 (29%), Positives = 256/605 (42%), Gaps = 32/605 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V     +V L C+    PL +   IW KDG+ +  S  IS  N  + L I +   S
Sbjct: 223 KNTRVVAGTSEVTLECVANARPLIKLHIIWKKDGMLL--SGGISDHN--RRLTIPNPTGS 278

Query: 98  DQGSYTCEVSNGVGEAKSY--SIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPE 154
           D G Y CE         S      LSVL  P F  EPE  I A  E+ V   C+A G+P 
Sbjct: 279 DAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQFVKEPERHITAEMEKVVDIPCRAKGVPP 338

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
           P I W  +   +        R+     + I  L   DTG + C A N+ G V    Y+ V
Sbjct: 339 PSITWYKDAAVVEVEKLARFRQRSDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAV 398

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILET 269
            + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T LE+
Sbjct: 399 TSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLES 458

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+  C
Sbjct: 459 GSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVC 518

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
               DP + +  +W +    +  ES PR     + SL ++++   D G YTCR  +    
Sbjct: 519 GVSHDPRVTVRYIWEKDGATLGVESNPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGN 578

Query: 390 IEAQATLTVQVPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
               A L V+    AP +    +  ++ +   ++W    P         Y ++  +E + 
Sbjct: 579 DSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWT--KPFDGNSPLLRYVLEM-SENNA 635

Query: 449 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ 508
             ++    V+  ++T+  V   VPA     R+ A N    G  S+    V+    P T  
Sbjct: 636 PWTVLLASVDP-KATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAP 694

Query: 509 SLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT 564
               I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I+D   
Sbjct: 695 PQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRY-CLAGLPVG---YQFKNITDADV 750

Query: 565 TSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLV 619
            +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    +    + 
Sbjct: 751 NNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIR 810

Query: 620 ISWTA 624
            +W A
Sbjct: 811 FTWNA 815



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 178/685 (25%), Positives = 269/685 (39%), Gaps = 76/685 (11%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K Q V+  +   +   ++  F      P PQ  W +DG  I PS RI+      +L+I  
Sbjct: 120 KHQSVSHGEAAVIHAPRIASF------PRPQVTWFRDGRKIPPSSRIAI-TLENTLVILS 172

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV---------LAAPYFTVEPEFIN-AAEEE 141
               D G Y  + V++  G+ K S  I L+V         +  P  +  P+     A   
Sbjct: 173 TVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGGPADLIRTPPSSSPPKNTRVVAGTS 232

Query: 142 TVTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA 199
            VT EC A+  P  ++H  W  +G  +S    +  R     R+TI N   SD G Y C A
Sbjct: 233 EVTLECVANARPLIKLHIIWKKDGMLLSGGISDHNR-----RLTIPNPTGSDAGYYECEA 287

Query: 200 ---TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHN 255
              ++S+  V +  Y++VL   P+  + P+   T + + VV + CR  G P P + W  +
Sbjct: 288 VLRSSSVPSVVRGAYLSVL-EPPQFVKEPERHITAEMEKVVDIPCRAKGVPPPSITWYKD 346

Query: 256 QKEL---TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHIT 311
              +      R+     G L+I+ +   D+G + CFARN  G  Q S  L V     +IT
Sbjct: 347 AAVVEVEKLARFRQRSDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAVTSIAPNIT 406

Query: 312 DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVT 369
             P D  V  G S    C     P  + +I W +G   +   S   PRF      SL ++
Sbjct: 407 RGPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTPLESGSLLIS 464

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAV-VSWNP 425
            +   D+G YTC A       EA A L V       + P + ++I+   A     VS +P
Sbjct: 465 PTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVCGVSHDP 524

Query: 426 -VSPQSL---RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV- 480
            V+ + +    G   G +       D  GS+       G+  T    + + A  N +R  
Sbjct: 525 RVTVRYIWEKDGATLGVESNPRIRLDRNGSLHISQTWSGDIGTYTC-RVISAGGNDSRSA 583

Query: 481 -LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKI 539
            L      + P   + +  T E                 A  L W KP   N  L+ Y +
Sbjct: 584 HLRVRQLPHAPEHPVATLSTVE---------------RRAINLTWTKPFDGNSPLLRYVL 628

Query: 540 KYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY 599
           +  S        LL  +    DP  TS  + GL P+  Y+  L      G G  SK    
Sbjct: 629 E-MSENNAPWTVLLASV----DPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTER 683

Query: 600 V------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQD 653
           V      P   P NV   G T  +++I W   PE   N     Y I +        +   
Sbjct: 684 VSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFK 743

Query: 654 DVLDWRQSELVLANQPTFQPYEIKV 678
           ++ D   + L+L +   +  YEI+V
Sbjct: 744 NITDADVNNLLLEDLIIWTNYEIEV 768



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 132/596 (22%), Positives = 213/596 (35%), Gaps = 70/596 (11%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           K V++ C   G P P   W KD   V +    R  Q + G  L I  +   D G + C  
Sbjct: 325 KVVDIPCRAKGVPPPSITWYKDAAVVEVEKLARFRQRSDG-GLQISGLVPDDTGMFQCFA 383

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPI 166
            N  GE ++ +       AP  T  P      +  +V   C+ SG P P I W    + +
Sbjct: 384 RNAAGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERIL 443

Query: 167 SQAPPN-PR-RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           +      PR   +    + I     SD G Y C ATNS G       + V A    IT+ 
Sbjct: 444 ASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWART-RITKP 502

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDVAF 279
           P+D+  + G    + C V   P+  V +I  +   T G     R  +   G L I+    
Sbjct: 503 PQDQSVIKGTQASMVCGVSHDPRVTVRYIWEKDGATLGVESNPRIRLDRNGSLHISQTWS 562

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------EDYEVEAGQSATFRCNAV 332
            D G YTC   +  G    S  L V++  H  + P       E   +    +  F  N+ 
Sbjct: 563 GDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPFDGNS- 621

Query: 333 SDPSLKLSIVWLRGSEP---IDFESEPR--------FVQSNDYSLTVTKSSELDSGQYTC 381
             P L+  +     + P   +    +P+         V +  Y   +   +++  GQ++ 
Sbjct: 622 --PLLRYVLEMSENNAPWTVLLASVDPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSK 679

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
             +        + +L  + P   P N       + +  ++ W P       G  +GY ++
Sbjct: 680 DTE--------RVSLPEEPPTAPPQNVIASGRTN-QSIMIQWQPPPESHQNGILKGYIIR 730

Query: 442 TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
                   G   + I +  +     ++  +  +     V A+N A  G  S  ++  T +
Sbjct: 731 YCLAGLPVGYQFKNITD-ADVNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQ 789

Query: 502 GVP----GTV-------------------QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
           GVP    G V                   Q +  I  G          P + NG+L GY+
Sbjct: 790 GVPTVPPGNVHAEATNSTTIRFTWNAPSPQFINGINQGYKXXXXXXXXPGEKNGILTGYR 849

Query: 539 IKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 850 ISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 900



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 103/275 (37%), Gaps = 28/275 (10%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           +PYF  EP       E   +   C A G    E  W+HN + +++            R  
Sbjct: 25  SPYFKTEPVRTQVHLEGNRLVLTCMAEGSWPLEFKWLHNNRELTKFSLE-------YRYM 77

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RV 242
           I +L ++  G Y C   N +G + +      +A+     E  K +    G+  V+   R+
Sbjct: 78  ITSLDRTHAGFYRCIVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAAVIHAPRI 137

Query: 243 FGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARNK--------- 292
              P+P+V W  + +++    R  I     L I      D+G Y   A N          
Sbjct: 138 ASFPRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQ 197

Query: 293 ---LGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSE 348
              L      G   +      +  P++  V AG S  T  C A + P +KL I+W +   
Sbjct: 198 PITLAVENVGGPADLIRTPPSSSPPKNTRVVAGTSEVTLECVANARPLIKLHIIWKKDGM 257

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            +        +  ++  LT+   +  D+G Y C A
Sbjct: 258 LLSGG-----ISDHNRRLTIPNPTGSDAGYYECEA 287



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 12/204 (5%)

Query: 397  TVQVPLE-APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIR 453
            T+Q P + AP+N +L +        + W P+      G+    GYK++ ++  DG G   
Sbjct: 1005 TLQAPPDMAPANVSL-RTASETSLWLRWMPLPEMEYNGNPESVGYKIK-YSRSDGHGKTL 1062

Query: 454  ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGT-VQSLEA 512
              +V         ++     ++   +V AFN   +GP S+ +   T E VP +   ++ A
Sbjct: 1063 SHVVQDRVEREYTIEDLEEWTEYRVQVQAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSA 1122

Query: 513  IPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
            +   SS+  ++W  V     NG+++GYK+ Y+  K +   P   R   +   ++ SA+L 
Sbjct: 1123 LATTSSSMLVRWSEVPEADRNGLVLGYKVIYKE-KDSDAQP---RFWLVEGNSSRSAQLT 1178

Query: 571  GLEPSTKYRIHLAGYTKAGDGAES 594
            GL     Y + +  +T+ GDG+ S
Sbjct: 1179 GLGKYVLYEVQVLAFTRIGDGSPS 1202



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ V      G   GYKV  + EKD +   R  +V  
Sbjct: 1112 VPSSGPTNVSALATTSSS-MLVRWSEVPEADRNGLVLGYKV-IYKEKDSDAQPRFWLVEG 1169

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1170 NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 1229

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P + Y
Sbjct: 1230 SVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVL----APSARQYTATGLKPESVY 1285

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1286 LFRITAQTRKGWGDAAEAL 1304



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 13/138 (9%)

Query: 518  SAFYLKWVK-PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLE 573
            ++ +L+W+  PE     N   +GYKIKY    G   G  L  +  + D       +  LE
Sbjct: 1025 TSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGH--GKTLSHV--VQDRVEREYTIEDLE 1080

Query: 574  PSTKYRIHLAGYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEI 628
              T+YR+ +  +   G G  S+ +       VP   P NV    +T +++++ W+ +PE 
Sbjct: 1081 EWTEYRVQVQAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEA 1140

Query: 629  EHNAPHFKYRIFWRRHNT 646
            + N     Y++ ++  ++
Sbjct: 1141 DRNGLVLGYKVIYKEKDS 1158


>gi|380805053|gb|AFE74402.1| protein sidekick-2 precursor, partial [Macaca mulatta]
          Length = 905

 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 177/605 (29%), Positives = 256/605 (42%), Gaps = 32/605 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V     +V L C+    PL +   IW KDG+ +  S  IS  N  + L I +   S
Sbjct: 220 KNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGMLL--SGGISDHN--RRLTIPNPTGS 275

Query: 98  DQGSYTCEVSNGVGEAKSY--SIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPE 154
           D G Y CE         S      LSVL  P F  EPE  I A  E+ V   C+A G+P 
Sbjct: 276 DAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQFVKEPERHITAEMEKVVDIPCRAKGVPP 335

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
           P I W  +   +        R+     + I  L   DTG + C A N+ G V    Y+ V
Sbjct: 336 PSITWYKDAAVVEVEKLARFRQRSDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAV 395

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILET 269
            + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T LE+
Sbjct: 396 TSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLES 455

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+  C
Sbjct: 456 GSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVC 515

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
               DP + +  +W +    +  ES PR     + SL ++++   D G YTCR  +    
Sbjct: 516 GVSHDPRVTVRYIWEKDGATLGVESNPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGN 575

Query: 390 IEAQATLTVQVPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
               A L V+    AP +    +  ++ +   ++W    P         Y ++  +E + 
Sbjct: 576 DSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWT--KPFDGNSPLLRYVLEM-SENNA 632

Query: 449 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ 508
             +I    V+  ++T+  V   VPA     R+ A N    G  S+    V+    P T  
Sbjct: 633 PWTILLASVDP-KATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAP 691

Query: 509 SLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT 564
               I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I+D   
Sbjct: 692 PQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRY-CLAGLPVG---YQFKNITDADV 747

Query: 565 TSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLV 619
            +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    +    + 
Sbjct: 748 NNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIR 807

Query: 620 ISWTA 624
            +W A
Sbjct: 808 FTWNA 812



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 178/684 (26%), Positives = 270/684 (39%), Gaps = 75/684 (10%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K Q V+  +   +   ++  F      P PQ  W +DG  I PS RI+      +L+I  
Sbjct: 118 KHQSVSHGEAAVIHAPRIASF------PRPQVTWFRDGRKIPPSSRIAI-TLENTLVILS 170

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFINAAEEET------- 142
               D G Y  + V++  G+ K S  I L+V  +  P   + P  I   +  +       
Sbjct: 171 TVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSE 230

Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
           VT EC A+  P  ++H  W  +G  +S    +  R     R+TI N   SD G Y C A 
Sbjct: 231 VTLECVANARPLIKLHIIWKKDGMLLSGGISDHNR-----RLTIPNPTGSDAGYYECEAV 285

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+  V +  Y++VL   P+  + P+   T + + VV + CR  G P P + W  + 
Sbjct: 286 LRSSSVPSVVRGAYLSVL-EPPQFVKEPERHITAEMEKVVDIPCRAKGVPPPSITWYKDA 344

Query: 257 KEL---TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITD 312
             +      R+     G L+I+ +   D+G + CFARN  G  Q S  L V     +IT 
Sbjct: 345 AVVEVEKLARFRQRSDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAVTSIAPNITR 404

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTK 370
            P D  V  G S    C     P  + +I W +G   +   S   PRF      SL ++ 
Sbjct: 405 GPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTPLESGSLLISP 462

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAV-VSWNP- 425
           +   D+G YTC A       EA A L V       + P + ++I+   A     VS +P 
Sbjct: 463 THISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVCGVSHDPR 522

Query: 426 VSPQSL---RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV-- 480
           V+ + +    G   G +       D  GS+       G+  T    + + A  N +R   
Sbjct: 523 VTVRYIWEKDGATLGVESNPRIRLDRNGSLHISQTWSGDIGTYTC-RVISAGGNDSRSAH 581

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
           L      + P   + +  T E                 A  L W KP   N  L+ Y ++
Sbjct: 582 LRVRQLPHAPEHPVATLSTVE---------------RRAINLTWTKPFDGNSPLLRYVLE 626

Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV 600
             S        LL  +    DP  TS  + GL P+  Y+  L      G G  SK    V
Sbjct: 627 -MSENNAPWTILLASV----DPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERV 681

Query: 601 ------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
                 P   P NV   G T  +++I W   PE   N     Y I +        +   +
Sbjct: 682 SLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKN 741

Query: 655 VLDWRQSELVLANQPTFQPYEIKV 678
           + D   + L+L +   +  YEI+V
Sbjct: 742 ITDADVNNLLLEDLIIWTNYEIEV 765



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 134/581 (23%), Positives = 218/581 (37%), Gaps = 56/581 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           K V++ C   G P P   W KD   V +    R  Q + G  L I  +   D G + C  
Sbjct: 322 KVVDIPCRAKGVPPPSITWYKDAAVVEVEKLARFRQRSDG-GLQISGLVPDDTGMFQCFA 380

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPI 166
            N  GE ++ +       AP  T  P      +  +V   C+ SG P P I W    + +
Sbjct: 381 RNAAGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERIL 440

Query: 167 SQAPPN-PR-RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           +      PR   +    + I     SD G Y C ATNS G       + V A    IT+ 
Sbjct: 441 ASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWART-RITKP 499

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDVAF 279
           P+D+  + G    + C V   P+  V +I  +   T G     R  +   G L I+    
Sbjct: 500 PQDQSVIKGTQASMVCGVSHDPRVTVRYIWEKDGATLGVESNPRIRLDRNGSLHISQTWS 559

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------EDYEVEAGQSATFRCNAV 332
            D G YTC   +  G    S  L V++  H  + P       E   +    +  F  N+ 
Sbjct: 560 GDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPFDGNS- 618

Query: 333 SDPSLKLSIVWLRGSEP---IDFESEPR--------FVQSNDYSLTVTKSSELDSGQYTC 381
             P L+  +     + P   +    +P+         V +  Y   +   +++  GQ++ 
Sbjct: 619 --PLLRYVLEMSENNAPWTILLASVDPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFS- 675

Query: 382 RAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGY 438
                      + T  V +P E   AP    +      +  ++ W P       G  +GY
Sbjct: 676 -----------KDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGY 724

Query: 439 KVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
            ++        G   + I +  +     ++  +  +     V A+N A  G  S  ++  
Sbjct: 725 IIRYCLAGLPVGYQFKNITD-ADVNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEW 783

Query: 499 TPEGVP----GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK-IKYQSVKGTKVGPLL 553
           T +GVP    G V + EA    +  F      P+  NG+  GYK I ++  +  +V  + 
Sbjct: 784 TLQGVPTVPPGNVHA-EATNSTTIRFTWNAPSPQFINGINQGYKLIAWEPEQEEEVTMVT 842

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            R P   D +     ++GL+  T+Y   +  +T  GDG  S
Sbjct: 843 AR-PNFQD-SIHVGFVSGLKKFTEYFTSVLCFTTPGDGPRS 881



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 107/274 (39%), Gaps = 27/274 (9%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           +PYF  EP       E   +   C A G    E  W+HN + +++            R  
Sbjct: 23  SPYFKTEPVRTQVHLEGNRLVLTCMAEGSWPLEFKWLHNSRELTKFSLE-------YRYM 75

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RV 242
           I +L ++  G Y C   N +G + +      +A+     E  K +    G+  V+   R+
Sbjct: 76  ITSLDRTHAGFYRCIVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAAVIHAPRI 135

Query: 243 FGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSG 300
              P+P+V W  + +++    R  I     L I      D+G Y   A N K G  + S 
Sbjct: 136 ASFPRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQ 195

Query: 301 SLTVK----------EHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEP 349
            +T+               I   P++  V AG S  T  C A + P +KL I+W +    
Sbjct: 196 PITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGML 255

Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +        +  ++  LT+   +  D+G Y C A
Sbjct: 256 LSGG-----ISDHNRRLTIPNPTGSDAGYYECEA 284


>gi|119609534|gb|EAW89128.1| sidekick homolog 2 (chicken), isoform CRA_c [Homo sapiens]
          Length = 2041

 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 177/605 (29%), Positives = 256/605 (42%), Gaps = 32/605 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V     +V L C+    PL +   IW KDGV +  S  IS  N  + L I +   S
Sbjct: 91  KNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGVLL--SGGISDHN--RRLTIPNPTGS 146

Query: 98  DQGSYTCEVSNGVGEAKSY--SIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPE 154
           D G Y CE         S      LSVL  P F  EPE  I A  E+ V   C+A G+P 
Sbjct: 147 DAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQFVKEPERHITAEMEKVVDIPCQAKGVPP 206

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
           P I W  +   +        R+     + I  L   DTG + C A N+ G V    Y+ V
Sbjct: 207 PSITWYKDAAVVEVEKLTRFRQRNDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAV 266

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILET 269
            + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T LE+
Sbjct: 267 TSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLES 326

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+  C
Sbjct: 327 GSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVC 386

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
               DP + +  +W +    +  ES PR     + SL ++++   D G YTCR  +    
Sbjct: 387 GVTHDPRVTIRYIWEKDGATLGTESHPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGN 446

Query: 390 IEAQATLTVQVPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
               A L V+    AP +    +  ++ +   ++W    P         Y ++  +E + 
Sbjct: 447 DSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWT--KPFDGNSPLIRYILEM-SENNA 503

Query: 449 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ 508
             ++    V+  ++T+  V   VPA     R+ A N    G  S+    V+    P T  
Sbjct: 504 PWTVLLASVDP-KATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAP 562

Query: 509 SLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT 564
               I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I+D   
Sbjct: 563 PQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRY-CLAGLPVG---YQFKNITDADV 618

Query: 565 TSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLV 619
            +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    +    + 
Sbjct: 619 NNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIR 678

Query: 620 ISWTA 624
            +W A
Sbjct: 679 FTWNA 683



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 148/566 (26%), Positives = 225/566 (39%), Gaps = 61/566 (10%)

Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
           VT EC A+  P  ++H  W  +G  +S    +  R     R+TI N   SD G Y C A 
Sbjct: 102 VTLECVANARPLIKLHIIWKKDGVLLSGGISDHNR-----RLTIPNPTGSDAGYYECEAV 156

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+  V +  Y++VL   P+  + P+   T + + VV + C+  G P P + W  + 
Sbjct: 157 LRSSSVPSVVRGAYLSVL-EPPQFVKEPERHITAEMEKVVDIPCQAKGVPPPSITWYKDA 215

Query: 257 -----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HI 310
                ++LT  R+     G L+I+ +   D+G + CFARN  G  Q S  L V     +I
Sbjct: 216 AVVEVEKLT--RFRQRNDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAVTSIAPNI 273

Query: 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTV 368
           T  P D  V  G S    C     P  + +I W +G   +   S   PRF      SL +
Sbjct: 274 TRGPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTPLESGSLLI 331

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPL---EAPSNFTLIQVIDAKKAV-VSWN 424
           + +   D+G YTC A       EA A L V       + P + ++I+   A     V+ +
Sbjct: 332 SPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVCGVTHD 391

Query: 425 P-VSPQSL---RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           P V+ + +    G   G +       D  GS+       G+  T    + + A  N +R 
Sbjct: 392 PRVTIRYIWEKDGATLGTESHPRIRLDRNGSLHISQTWSGDIGTYTC-RVISAGGNDSRS 450

Query: 481 --LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
             L      + P   + +  T E                 A  L W KP   N  L+ Y 
Sbjct: 451 AHLRVRQLPHAPEHPVATLSTVE---------------RRAINLTWTKPFDGNSPLIRYI 495

Query: 539 IKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF 598
           ++  S        LL  +    DP  TS  + GL P+  Y+  L      G G  SK   
Sbjct: 496 LE-MSENNAPWTVLLASV----DPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTE 550

Query: 599 YV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
            V      P   P NV   G T  +++I W   PE   N     Y I +        +  
Sbjct: 551 RVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQF 610

Query: 653 DDVLDWRQSELVLANQPTFQPYEIKV 678
            ++ D   + L+L +   +  YEI+V
Sbjct: 611 KNITDADVNNLLLEDLIIWTNYEIEV 636



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 11/177 (6%)

Query: 422 SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR-- 479
           +WN  SPQ + G  +GYK+  W E + E  +  +        +  V  FV   K F    
Sbjct: 680 TWNAPSPQFINGINQGYKLIAW-EPEQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYF 737

Query: 480 --VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
             VL F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY
Sbjct: 738 TSVLCFTTPGDGPRSTPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGY 797

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           +I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 798 RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 849



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N  ++    A +  V+W P    S  G  +GYK+  W  + G  + R   +  
Sbjct: 1491 VPTAAPRNV-VVHGATATQLDVTWEPPPLDSQNGDIQGYKIYFWEAQRGNLTERVKTLFL 1549

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E++  ++      +     V AFN A +GP S      T +  P    S++   L +++
Sbjct: 1550 AENSV-KLKNLTGYTAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSAPSSVKFSELTTTS 1608

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNG+L GY++ Y+
Sbjct: 1609 VNVSWEAPQFPNGILEGYRLVYE 1631



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 138/347 (39%), Gaps = 48/347 (13%)

Query: 379  YTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVID--AKKAVVSWNP----VSPQ 429
            +   AQT   + EA   L V         P +  ++Q  D  A+  ++SW P    +SP 
Sbjct: 1242 FRITAQTRKGWGEAAEALVVTTEKRDRPQPPSRPMVQQEDVRARSVLLSWEPGSDGLSP- 1300

Query: 430  SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
                  R Y +QT     G  ++    V+   S+   VD+  P +    RV A N   + 
Sbjct: 1301 -----VRYYTIQTRELPSGRWALHSASVSHNASSFI-VDRLKPFTSYKFRVKATNDIGDS 1354

Query: 490  PPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQ 542
              SE    +T     P+  P     L   P  +++  ++W  P  ++ NG+L+G++I+Y+
Sbjct: 1355 EFSEESESLTTLQAAPDEAPTI---LSVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYR 1411

Query: 543  SV--KGTKVGPL---------------LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
             +  +G +   L               +  +  +S P+ T  +L  L    +Y I ++ Y
Sbjct: 1412 ELLYEGLRGFTLRGINNPGATWAELTSMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVY 1471

Query: 586  TKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
               G+G  S  + +F    VP   P NV   G+T   L ++W   P    N     Y+I+
Sbjct: 1472 NAVGEGPSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQNGDIQGYKIY 1531

Query: 641  WRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDG 687
            +     G    +   L   ++ + L N   +  Y + V       DG
Sbjct: 1532 FWEAQRGNLTERVKTLFLAENSVKLKNLTGYTAYMVSVAAFNAAGDG 1578



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ V      G   GYKV  + EKD +   R  +V  
Sbjct: 1067 VPSSGPTNVSALATT-SSSMLVRWSEVPEADRNGLVLGYKVM-YKEKDSDTQPRFWLVEG 1124

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1125 NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 1184

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P + Y
Sbjct: 1185 SVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVL----APSARQYTATGLKPESVY 1240

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1241 LFRITAQTRKGWGEAAEAL 1259



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 128/308 (41%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 827  LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGPPTNLGISN---------- 872

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +   G + E    L++    N+ ++ + EV    P
Sbjct: 873  IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNP 932

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 933  FTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTA---SETSLWLRWMPL 989

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY    G   G  L  +  + D       +  LE  T+YR+ + 
Sbjct: 990  PEMEYNGNPESVGYKIKYSRSDGH--GKTLSHV--VQDRVERDYTIEDLEEWTEYRVQVQ 1045

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S+ +       VP   P NV    +T +++++ W+ +PE + N     Y+
Sbjct: 1046 AFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYK 1105

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1106 VMYKEKDS 1113


>gi|326663834|ref|XP_683194.5| PREDICTED: protein sidekick-1 [Danio rerio]
          Length = 2183

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 189/688 (27%), Positives = 309/688 (44%), Gaps = 59/688 (8%)

Query: 64  QTIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFSDQGSYTCEV-----SNGVGEAKSY 116
           Q  W ++GV      R++ G  ++G+ L+I +   +D G Y CE      S    EAK+Y
Sbjct: 292 QVFWKRNGV------RLTAGVDSFGRRLVISNPTSADGGLYVCEATLRNSSQKSTEAKAY 345

Query: 117 SIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
              LSVL +P+FT +P+ ++ A  E+ V  +C A G+P P++ W  +  P+S    N R 
Sbjct: 346 ---LSVLESPHFTSKPKRYMIAEVEKNVELQCHAKGVPTPKLEWFKDAIPLSTLN-NSRY 401

Query: 176 KVGPNRITIE--NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDG 233
           K+  + + ++   ++  D G + C A N+ G +     + + + +P  T  P D    DG
Sbjct: 402 KLTTSSMVLQVRRIQPDDAGIFQCFAENTAGEIQAHTNLVITSMSPLFTTPPSDITVTDG 461

Query: 234 KTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDVAFADSGEYTCF 288
            + V TC   GAPKP + W    + L  G     R+T+LE+G L+I  +  +D+G YTC 
Sbjct: 462 TSAVFTCDTSGAPKPAIVWRKGSQVLASGSVQTPRFTLLESGGLQILPIMPSDAGNYTCL 521

Query: 289 ARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
           A N  G    + +LTV   T I+  PED  V  G +A   C A  DP + +   W +G++
Sbjct: 522 ASNTEGLVNATVALTVLSRTFISTPPEDQRVIKGTTAVLHCAATHDPRVTVRYSWKKGTK 581

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNF 408
           P+   +  R V   + SL ++++   D G YTCR  +        A L V     +P N 
Sbjct: 582 PLSVSTGGR-VSMKEGSLQISQTWSGDIGDYTCRVISPAGNDSKSARLEVIELPHSPRNL 640

Query: 409 TL-IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEV 467
            + +   D++  ++SW  V P         Y ++ ++E +    +    V+   ++   V
Sbjct: 641 QVALNETDSRTVLLSW--VRPFDGNSPLLHYIIE-FSENNSPWKVYMDDVSPTLASLL-V 696

Query: 468 DKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLK 523
               PA     RV A N    G Y+   + ++    P   P   +++ A    + +  ++
Sbjct: 697 IGLTPARTYQFRVCAVNQVGRGQYSAETNRLMLREEPPSAPP--KNIVASGRTNQSIMVQ 754

Query: 524 WVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIH 581
           W  P +P  NGVL GY ++Y+ + G    P   +L  I+        +  L   T+Y I 
Sbjct: 755 WQPPPEPQLNGVLRGYVLRYR-LAGL---PGEFQLKNITSAEINYCLIGELIIWTQYEIQ 810

Query: 582 LAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
           +A YT AG G  S+      L  VP   P +VE        +  +WT  P+   N  +  
Sbjct: 811 VAAYTGAGLGVYSQSATEYTLQGVPTAPPQDVEAVALNSTTIKFTWTPPPQQFINGINQG 870

Query: 637 YRIF-WRRHNTGEAWNQDDVLDWRQSEL--VLANQPTFQPYEIKVVQTWTEKDGEGSIRE 693
           Y++  W  H            ++  S     ++N   F  YE  V+   T  DG  S  +
Sbjct: 871 YKLLVWPEHCPDCITMVTIAPEFHGSRHYGYVSNLRKFTWYETAVLCFTTPGDGPASTSQ 930

Query: 694 LIVNKGESTTTEVDKFVPASK-NFARVL 720
           LI        T VDK  P ++ +F  +L
Sbjct: 931 LI-------QTHVDKPGPVTQLSFTEIL 951



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 157/617 (25%), Positives = 246/617 (39%), Gaps = 61/617 (9%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV-GEAK-SYSI 118
           P PQ  W +DGV I P+ R++       L++     +D G Y  +  N   GE K S SI
Sbjct: 185 PRPQVTWFRDGVKIIPNHRVAI-TLDNQLVVLSTAAADAGRYYVQAVNERNGENKTSPSI 243

Query: 119 DLSV--------LAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPIS 167
            LS+        L AP   + P+    +  A E T+     A  L   ++ W  NG  ++
Sbjct: 244 YLSIANVIAPAELVAPVIVIAPKNTSVVAGASEATLECVANARSLDRLQVFWKRNGVRLT 303

Query: 168 QAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT---NSLGYVYKDVYVNVLAHAPEITEA 224
               +  R     R+ I N   +D G Y C AT   +S        Y++VL  +P  T  
Sbjct: 304 AGVDSFGR-----RLVISNPTSADGGLYVCEATLRNSSQKSTEAKAYLSVL-ESPHFTSK 357

Query: 225 PKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGD-LKITDVAF 279
           PK     +  K V L C   G P P++ W  +      L   RY +  +   L++  +  
Sbjct: 358 PKRYMIAEVEKNVELQCHAKGVPTPKLEWFKDAIPLSTLNNSRYKLTTSSMVLQVRRIQP 417

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHI-TDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            D+G + CFA N  G  Q   +L +   + + T  P D  V  G SA F C+    P  K
Sbjct: 418 DDAGIFQCFAENTAGEIQAHTNLVITSMSPLFTTPPSDITVTDGTSAVFTCDTSGAP--K 475

Query: 339 LSIVWLRGSEPIDFES--EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            +IVW +GS+ +   S   PRF       L +      D+G YTC A      + A   L
Sbjct: 476 PAIVWRKGSQVLASGSVQTPRFTLLESGGLQILPIMPSDAGNYTCLASNTEGLVNATVAL 535

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPV-SPQ-SLRGHFRGYKVQTWTEKDGEGSIRE 454
           TV       +     +VI    AV+       P+ ++R  ++           G  S++E
Sbjct: 536 TVLSRTFISTPPEDQRVIKGTTAVLHCAATHDPRVTVRYSWKKGTKPLSVSTGGRVSMKE 595

Query: 455 LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
             +   ++ + ++  +        RV++  G  N   S  +  +     P  +Q +    
Sbjct: 596 GSLQISQTWSGDIGDYT------CRVISPAG--NDSKSARLEVIELPHSPRNLQ-VALNE 646

Query: 515 LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERLPYISD--PTTTSAKLAG 571
             S    L WV+P   N  L+ Y I++       KV        Y+ D  PT  S  + G
Sbjct: 647 TDSRTVLLSWVRPFDGNSPLLHYIIEFSENNSPWKV--------YMDDVSPTLASLLVIG 698

Query: 572 LEPSTKYRIHLAGYTKAGDG---AESKYLFYV---PFKNPDNVEGRGSTPNNLVISWTAM 625
           L P+  Y+  +    + G G   AE+  L      P   P N+   G T  ++++ W   
Sbjct: 699 LTPARTYQFRVCAVNQVGRGQYSAETNRLMLREEPPSAPPKNIVASGRTNQSIMVQWQPP 758

Query: 626 PEIEHNAPHFKYRIFWR 642
           PE + N     Y + +R
Sbjct: 759 PEPQLNGVLRGYVLRYR 775



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 144/623 (23%), Positives = 237/623 (38%), Gaps = 63/623 (10%)

Query: 37   YVTRKKEVALRNKKVELF-CIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLII 91
            + T   ++ + +    +F C   G P P  +W K G  +  S  +    +       L I
Sbjct: 449  FTTPPSDITVTDGTSAVFTCDTSGAPKPAIVWRK-GSQVLASGSVQTPRFTLLESGGLQI 507

Query: 92   KHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASG 151
              +  SD G+YTC  SN  G   + ++ L+VL+  + +  PE     +  T    C A+ 
Sbjct: 508  LPIMPSDAGNYTCLASNTEGLVNA-TVALTVLSRTFISTPPEDQRVIKGTTAVLHCAATH 566

Query: 152  LPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
             P   +   W    KP+S +    R  +    + I      D G+Y C   +  G   K 
Sbjct: 567  DPRVTVRYSWKKGTKPLSVSTGG-RVSMKEGSLQISQTWSGDIGDYTCRVISPAGNDSKS 625

Query: 210  VYVNV--LAHAPEITEAPKDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTI 266
              + V  L H+P   +   +E   D +TV+L+  R F    P +++I    E        
Sbjct: 626  ARLEVIELPHSPRNLQVALNE--TDSRTVLLSWVRPFDGNSPLLHYIIEFSENNSPWKVY 683

Query: 267  LE-----TGDLKITDVAFADSGEYTCFARNKLGTAQGSGS---LTVKEHTHITDQPEDYE 318
            ++        L +  +  A + ++   A N++G  Q S     L ++E       P    
Sbjct: 684  MDDVSPTLASLLVIGLTPARTYQFRVCAVNQVGRGQYSAETNRLMLREEP--PSAPPKNI 741

Query: 319  VEAG---QSATFRCNAVSDPSLK--LSIVWLR---GSEPIDFESEPRFVQSNDYSLT--- 367
            V +G   QS   +     +P L   L    LR      P +F+ +       +Y L    
Sbjct: 742  VASGRTNQSIMVQWQPPPEPQLNGVLRGYVLRYRLAGLPGEFQLKNITSAEINYCLIGEL 801

Query: 368  -VTKSSELDSGQYTCRAQTELDFIEAQAT-LTVQ-VPLEAPSNFTLIQVIDAKKAVVSWN 424
             +    E+    YT      L      AT  T+Q VP   P +   +  +++     +W 
Sbjct: 802  IIWTQYEIQVAAYTGAG---LGVYSQSATEYTLQGVPTAPPQDVEAV-ALNSTTIKFTWT 857

Query: 425  PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFA----RV 480
            P   Q + G  +GYK+  W E   +     ++    E   +    +V   + F      V
Sbjct: 858  PPPQQFINGINQGYKLLVWPEHCPD--CITMVTIAPEFHGSRHYGYVSNLRKFTWYETAV 915

Query: 481  LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
            L F    +GP S      T    PG V  L    +  ++  + W +PE  NG++ GY + 
Sbjct: 916  LCFTTPGDGPASTSQLIQTHVDKPGPVTQLSFTEILDTSLRISWQEPEDKNGIITGYVLS 975

Query: 541  YQSV--KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF 598
            +Q      T V   L         +T + K+ GL   T Y + +A  T+AG GA +    
Sbjct: 976  WQEAGQNETLVSQTLSN-------STLAYKVTGLTSLTTYALQVAAVTQAGVGASTSSTI 1028

Query: 599  YVPFKNPDNVEGRGSTPNNLVIS 621
                  P  + G    P+NLVIS
Sbjct: 1029 STGL--PPELPG---APSNLVIS 1046



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 9/200 (4%)

Query: 350  IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI-EAQATLTVQV------PL 402
            ++F ++  F   +  SLT  + ++L   +      T  + + E+ ++  V+V      P 
Sbjct: 1610 LEFRAKSTFKTVSSPSLTEFELTQLSKYRRYAIVMTAFNVVGESPSSAPVEVFVGEAAPS 1669

Query: 403  EAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGES 462
             AP N   ++ + + +  V W P   ++  G+ +GYK+  W EKD +    + +V     
Sbjct: 1670 VAPQNIQ-VKSVSSNQLDVEWQPPPVETQNGNIQGYKIHYW-EKDRQNETEKELVLFVPE 1727

Query: 463  TTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYL 522
            T   +      +    ++ AFN A +GP S      T +  PG+   +    +  S+  +
Sbjct: 1728 TCVHLKNLTSYTSYLVQLSAFNAAGDGPLSTARKGRTLQAAPGSPSRVVFSEVTGSSLNV 1787

Query: 523  KWVKPEQPNGVLMGYKIKYQ 542
             W  P QPNGVL GY++ Y+
Sbjct: 1788 SWGAPLQPNGVLEGYRVMYE 1807



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 118/303 (38%), Gaps = 34/303 (11%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           APYF  E        E   +   C A G    E  W+ N   I++  P         R T
Sbjct: 69  APYFKTETGGAQTHLEGNRLVLTCLAEGSWPLEFKWMRNSTDITEYTPE-------YRYT 121

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLT-CRV 242
           I +L++ D G Y C   N +G + +      +A+     E  + +    G+  VL    V
Sbjct: 122 IVSLKREDAGVYQCAVRNRMGALIQTRADVRVAYMDNFAELEQRKTVSQGRAAVLNPPAV 181

Query: 243 FGAPKPEVNWIHNQ-KELTGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSG 300
              P+P+V W  +  K +   R  I     L +   A AD+G Y   A N + G  + S 
Sbjct: 182 TSFPRPQVTWFRDGVKIIPNHRVAITLDNQLVVLSTAAADAGRYYVQAVNERNGENKTSP 241

Query: 301 SLTVKEHTHITD----------QPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEP 349
           S+ +     I             P++  V AG S AT  C A +    +L + W R    
Sbjct: 242 SIYLSIANVIAPAELVAPVIVIAPKNTSVVAGASEATLECVANARSLDRLQVFWKRNGVR 301

Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA---QTELDFIEAQATLTVQVPLEAPS 406
           +        V S    L ++  +  D G Y C A    +     EA+A L+V   LE+P 
Sbjct: 302 LTAG-----VDSFGRRLVISNPTSADGGLYVCEATLRNSSQKSTEAKAYLSV---LESP- 352

Query: 407 NFT 409
           +FT
Sbjct: 353 HFT 355



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 3/144 (2%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + +   +V+W  V      GH  GYKV  + EKD + + +  +VN 
Sbjct: 1245 VPSGAPENVS-AEAMSSTSVLVTWGSVPEHQKNGHILGYKV-LYREKDSDRAPQAHLVNG 1302

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGTVQSLEAIPLGSS 518
             ++    +      +    +VLAF    +GPPS    +  T + VPG    L    +  S
Sbjct: 1303 NQTHMLLLRNLSKFTVYEIQVLAFTRVGDGPPSLPPTAERTKDDVPGPPVRLMFPEVRLS 1362

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQ 542
            +  + W  P +PNG++MGY+I Y+
Sbjct: 1363 SVRVVWQPPSEPNGIIMGYQISYR 1386



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 11/163 (6%)

Query: 535  MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            +GY+++ Q   G        R+  +SD  +    + GLE  T Y + +  +   G G  S
Sbjct: 1179 VGYRVRAQRADGFG----QPRMETVSDRLSCEVTVEGLEEWTDYELSIQAFNSIGPGPWS 1234

Query: 595  KYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEA 649
             ++       VP   P+NV     +  +++++W ++PE + N     Y++ +R  ++  A
Sbjct: 1235 SHVLGKTKESVPSGAPENVSAEAMSSTSVLVTWGSVPEHQKNGHILGYKVLYREKDSDRA 1294

Query: 650  WNQDDVLDWRQSE-LVLANQPTFQPYEIKVVQTWTEKDGEGSI 691
              Q  +++  Q+  L+L N   F  YEI+V+      DG  S+
Sbjct: 1295 -PQAHLVNGNQTHMLLLRNLSKFTVYEIQVLAFTRVGDGPPSL 1336



 Score = 40.4 bits (93), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 55/268 (20%), Positives = 110/268 (41%), Gaps = 27/268 (10%)

Query: 436  RGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EI 494
            R + +QT    DG+       +    S+  EVD+  P +    R++A N   +   S E 
Sbjct: 1480 RYFTLQTLELPDGDWKTHTSSIPHNNSSW-EVDRLKPYTSYKFRMMATNDVGDSAFSKET 1538

Query: 495  ISFVTPEGVPGTVQSLEAI-PLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGP 551
                T + VPG    +  + P  +++  ++W  P +   NG+L+GY++ Y+ +       
Sbjct: 1539 EPVTTLQDVPGEAPVILLVKPSTTTSVIVQWQPPAEGTVNGILVGYRVYYRELPSESNPK 1598

Query: 552  LLER---------------LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY 596
            +++                   +S P+ T  +L  L    +Y I +  +   G+   S  
Sbjct: 1599 VVQSTNQSTISLEFRAKSTFKTVSSPSLTEFELTQLSKYRRYAIVMTAFNVVGESPSSAP 1658

Query: 597  L-FYV----PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI-FWRRHNTGEAW 650
            +  +V    P   P N++ +  + N L + W   P    N     Y+I +W +    E  
Sbjct: 1659 VEVFVGEAAPSVAPQNIQVKSVSSNQLDVEWQPPPVETQNGNIQGYKIHYWEKDRQNET- 1717

Query: 651  NQDDVLDWRQSELVLANQPTFQPYEIKV 678
             ++ VL   ++ + L N  ++  Y +++
Sbjct: 1718 EKELVLFVPETCVHLKNLTSYTSYLVQL 1745



 Score = 40.0 bits (92), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 116/284 (40%), Gaps = 47/284 (16%)

Query: 391  EAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE 449
            E +   T+Q VP EAP    L++       +V W P +  ++ G   GY+V  + E   E
Sbjct: 1537 ETEPVTTLQDVPGEAPV-ILLVKPSTTTSVIVQWQPPAEGTVNGILVGYRVY-YRELPSE 1594

Query: 450  GSIRELIVNKGESTT-----------------------TEVDKFVPASKNFARVL-AFNG 485
             + + ++ +  +ST                        T++ K+    + +A V+ AFN 
Sbjct: 1595 SNPK-VVQSTNQSTISLEFRAKSTFKTVSSPSLTEFELTQLSKY----RRYAIVMTAFNV 1649

Query: 486  AYNGPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQ 542
                P S  +     E  P    Q+++   + S+   ++W  P  E  NG + GYKI Y 
Sbjct: 1650 VGESPSSAPVEVFVGEAAPSVAPQNIQVKSVSSNQLDVEWQPPPVETQNGNIQGYKIHYW 1709

Query: 543  SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-----KYL 597
              K  +     E + ++ +   T   L  L   T Y + L+ +  AGDG  S     + L
Sbjct: 1710 E-KDRQNETEKELVLFVPE---TCVHLKNLTSYTSYLVQLSAFNAAGDGPLSTARKGRTL 1765

Query: 598  FYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
               P  +P  V     T ++L +SW A   ++ N     YR+ +
Sbjct: 1766 QAAP-GSPSRVVFSEVTGSSLNVSWGA--PLQPNGVLEGYRVMY 1806


>gi|410920619|ref|XP_003973781.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
           [Takifugu rubripes]
          Length = 1151

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 195/719 (27%), Positives = 309/719 (42%), Gaps = 81/719 (11%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           ++ +++ L CI  G P PQ  W K G  +    ++   ++GK LI+  VE  D G Y C+
Sbjct: 255 VKGEELILECIAAGFPTPQVEWVKMGQHLPTKAKME--SHGKLLIVPDVEQEDGGKYMCK 312

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             N VGEA  Y   + V   P +  EPE   +     V  +C ASG P+P + W  NG P
Sbjct: 313 AKNTVGEAVHY-FTVIVEEPPEWVSEPESQLSMIGSDVLIKCSASGTPQPAVTWRVNGAP 371

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           + Q  P+P R+V  + I + N + SD+  Y C A+N  G +  +  + ++   P I    
Sbjct: 372 L-QDSPSPNRRVLGDTIVLHNTKASDSAVYQCEASNRHGTLLSNANIMIMNLPPMILTQD 430

Query: 226 KDEYT-VDGKTVVLTCRVFGAPKPEVNWIHNQ--KELTGGRYTILETGDLKITDVAFADS 282
            ++Y+ V+GK V++ C+VF +P   + W  +     + G R+++ + G L+I      DS
Sbjct: 431 DEDYSAVEGKGVMMHCKVFSSPPSAITWSKDDTSDSVEGPRFSVHDNGTLEIYSAEKEDS 490

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G YTCFA+N  G++  +  L+VK+ T I + PED  +  G +A F C A  D S      
Sbjct: 491 GPYTCFAKNTEGSSAINVMLSVKDPTRIMEPPEDLRILKGTTAQFSCLAEYDKSFSDDFE 550

Query: 341 IVWLRGSEPIDF---ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           I+W +  + I F   E+   F++  D  L +   S  D G YTC A+T +D  +A A L 
Sbjct: 551 ILWEKDDKEIAFNYTENSRYFIE--DGILQIVNVSHRDQGVYTCLARTPMDGDKAAALLL 608

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQ--SLRGHFRGYKVQTWTEKDGEGSIREL 455
           V    +AP  + ++    ++   + W P      S       Y+   W      G+ +EL
Sbjct: 609 VLDVPDAP-QYLVLSEHKSQSVKLKWIPGDDHNSSTTEFIIQYEESQWEP----GNWKEL 663

Query: 456 IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPGTVQSLEAIP 514
           +   G   +  +         F RV   N    GPPS+    + TP   P   ++ E I 
Sbjct: 664 LRVPGNHNSAILKLHGHVDYCF-RVSGVNAVGRGPPSQPTERYRTPPAAPD--KNPENIK 720

Query: 515 LGSSA---FYLKW--VKPEQPNGVLMGYKIKY--QSVKGTKVGPLLERLPYISDPTTTSA 567
           + S       + W  + P + NG  + YK+ Y  Q V+      +++R  ++   T T  
Sbjct: 721 IESHMPQEMNINWEPLLPIEHNGPGLEYKVSYRRQDVEEDWQEHIVKRHSFVVKNTPTFV 780

Query: 568 KLAGLEPSTKYRIHLAGYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISW 622
                     Y I +      G G E +          P   PD+V       + + +SW
Sbjct: 781 P---------YEIKIQARNHQGWGPEPRIKTGYSGEDFPSAAPDDVAVEVINSSVVKVSW 831

Query: 623 TAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTW 682
             + + + +     YRI W                WR   LV                  
Sbjct: 832 MRVHKDKLHGHLGGYRISW----------------WRLRSLV------------------ 857

Query: 683 TEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
             K   G+ +E +   G+     V +  P S+    V+ FNG  NGP S  ++F TPEG
Sbjct: 858 DSKKNHGN-KETLTFPGDRNHALVPELTPFSEYSLIVMTFNGRGNGPGSHPVNFKTPEG 915



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 96/198 (48%), Gaps = 10/198 (5%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW------TEKDGEGSIRE 454
            P  AP +   ++VI++    VSW  V    L GH  GY++  W        K   G+ +E
Sbjct: 810  PSAAPDDVA-VEVINSSVVKVSWMRVHKDKLHGHLGGYRISWWRLRSLVDSKKNHGN-KE 867

Query: 455  LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
             +   G+     V +  P S+    V+ FNG  NGP S  ++F TPEGVP    +     
Sbjct: 868  TLTFPGDRNHALVPELTPFSEYSLIVMTFNGRGNGPGSHPVNFKTPEGVPERNPAFRITD 927

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
            +      + W  P +PNG+L GY ++YQ +  T+ GP+  +   IS+P+TT      LEP
Sbjct: 928  VQRHTVSVAWAPPLEPNGILTGYLLEYQLINDTEAGPV--QTVDISNPSTTKWIFRDLEP 985

Query: 575  STKYRIHLAGYTKAGDGA 592
             +KY+  L   T  G GA
Sbjct: 986  VSKYQFDLRSCTTVGCGA 1003



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 146/599 (24%), Positives = 239/599 (39%), Gaps = 46/599 (7%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQG 100
           + ++++    V + C   GTP P   W  +G P+  S   ++   G ++++ + + SD  
Sbjct: 339 ESQLSMIGSDVLIKCSASGTPQPAVTWRVNGAPLQDSPSPNRRVLGDTIVLHNTKASDSA 398

Query: 101 SYTCEVSNGVGEAKSYS-IDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHW 159
            Y CE SN  G   S + I +  L     T + E  +A E + V   CK    P   I W
Sbjct: 399 VYQCEASNRHGTLLSNANIMIMNLPPMILTQDDEDYSAVEGKGVMMHCKVFSSPPSAITW 458

Query: 160 VHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
             +    S +   PR  V  N  + I +  K D+G Y C A N+ G    +V ++V    
Sbjct: 459 SKDD--TSDSVEGPRFSVHDNGTLEIYSAEKEDSGPYTCFAKNTEGSSAINVMLSV-KDP 515

Query: 219 PEITEAPKDEYTVDGKTVVLTC-----RVFGAPKPEVNWIHNQKELT-----GGRYTILE 268
             I E P+D   + G T   +C     + F +   E+ W  + KE+        RY I E
Sbjct: 516 TRIMEPPEDLRILKGTTAQFSCLAEYDKSF-SDDFEILWEKDDKEIAFNYTENSRYFI-E 573

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
            G L+I +V+  D G YTC AR  +   + +  L V +   + D P+   +   +S + +
Sbjct: 574 DGILQIVNVSHRDQGVYTCLARTPMDGDKAAALLLVLD---VPDAPQYLVLSEHKSQSVK 630

Query: 329 CNAV----SDPSLKLSIVWLRGS--EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCR 382
              +     + S    I+    S  EP +++   R V  N  S  +     +D       
Sbjct: 631 LKWIPGDDHNSSTTEFIIQYEESQWEPGNWKELLR-VPGNHNSAILKLHGHVDYCFRVSG 689

Query: 383 AQTELDFIEAQATLTVQVPLEAPSN---FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYK 439
                    +Q T   + P  AP        I+    ++  ++W P+ P    G    YK
Sbjct: 690 VNAVGRGPPSQPTERYRTPPAAPDKNPENIKIESHMPQEMNINWEPLLPIEHNGPGLEYK 749

Query: 440 VQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           V ++  +D E   +E IV +          FVP      ++ A N    GP   I +  +
Sbjct: 750 V-SYRRQDVEEDWQEHIVKRHSFVVKNTPTFVPYE---IKIQARNHQGWGPEPRIKTGYS 805

Query: 500 PEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY----QSVKGTKVGPL 552
            E  P       A+  + SS   + W  V  ++ +G L GY+I +      V   K    
Sbjct: 806 GEDFPSAAPDDVAVEVINSSVVKVSWMRVHKDKLHGHLGGYRISWWRLRSLVDSKKNHGN 865

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGR 611
            E L +  D     A +  L P ++Y + +  +   G+G  S     V FK P+ V  R
Sbjct: 866 KETLTFPGD--RNHALVPELTPFSEYSLIVMTFNGRGNGPGSH---PVNFKTPEGVPER 919



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 149/371 (40%), Gaps = 33/371 (8%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPS---DRISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           + C   G P P+  W+K+G   +PS     I++GN G  +I  +   ++ QG Y C  SN
Sbjct: 59  MMCEAKGNPEPEFRWTKNGQQFDPSLDPRLITEGNSGTFVIPNNGNLTEYQGIYRCFASN 118

Query: 109 GVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECK-ASGLPEPEIHWVHNGK 164
            +G A S  I+  V   P F   T+EP  +   E +     C    G+P  +I+W+    
Sbjct: 119 RLGTAISREIEFIVPNVPKFPKETIEPVVVE--EGQPFILNCNPPDGIPPLQIYWM--TL 174

Query: 165 PISQAPPNPRRKVGPNRITI--ENLRKSDTGNYGCNAT----------NSLGYVYKDVYV 212
            +     + R  +G N        + K    +Y C A            ++  + K    
Sbjct: 175 SLQHIEQDERVSMGLNGDLYFSHAVDKDSRRDYCCFAAFPRIRTIVQKTAMSVIVKTTNA 234

Query: 213 NVLAHAPEITEAP---KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILET 269
            +L   P I   P    +   V G+ ++L C   G P P+V W+   + L          
Sbjct: 235 -ILQRRPSIMTPPGVKSETQLVKGEELILECIAAGFPTPQVEWVKMGQHLPTKAKMESHG 293

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
             L + DV   D G+Y C A+N +G A    ++ V+E      +PE      G     +C
Sbjct: 294 KLLIVPDVEQEDGGKYMCKAKNTVGEAVHYFTVIVEEPPEWVSEPESQLSMIGSDVLIKC 353

Query: 330 NAVSDPSLKLSIVWLRGSEPI-DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           +A   P  + ++ W     P+ D  S  R V  +   L  TK+S  DS  Y C A     
Sbjct: 354 SASGTP--QPAVTWRVNGAPLQDSPSPNRRVLGDTIVLHNTKAS--DSAVYQCEASNRHG 409

Query: 389 FIEAQATLTVQ 399
            + + A + + 
Sbjct: 410 TLLSNANIMIM 420



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 75/329 (22%), Positives = 131/329 (39%), Gaps = 34/329 (10%)

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEI 157
           G  TC  +  +  A +  I L V   P  T +     I    +E     C+A G PEPE 
Sbjct: 14  GVITCVCA--LHLAAALDIPLEVEQLPTITAQASSSLIAFPFDENFPMMCEAKGNPEPEF 71

Query: 158 HWVHNGKPISQAPPNPRRKVGPNRITI-----ENLRKSDTGNYGCNATNSLGYVYKDVYV 212
            W  NG+    +  +PR     N  T       NL +   G Y C A+N LG        
Sbjct: 72  RWTKNGQQFDPS-LDPRLITEGNSGTFVIPNNGNLTEYQ-GIYRCFASNRLGTAISREIE 129

Query: 213 NVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNW--IHNQKELTGGRYTILE 268
            ++ + P+  +   +   V +G+  +L C    G P  ++ W  +  Q      R ++  
Sbjct: 130 FIVPNVPKFPKETIEPVVVEEGQPFILNCNPPDGIPPLQIYWMTLSLQHIEQDERVSMGL 189

Query: 269 TGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTHITDQ----------P 314
            GDL  +     DS  +Y CFA   R +    + + S+ VK    I  +           
Sbjct: 190 NGDLYFSHAVDKDSRRDYCCFAAFPRIRTIVQKTAMSVIVKTTNAILQRRPSIMTPPGVK 249

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
            + ++  G+     C A   P+ ++   W++  + +  +++   ++S+   L V    + 
Sbjct: 250 SETQLVKGEELILECIAAGFPTPQVE--WVKMGQHLPTKAK---MESHGKLLIVPDVEQE 304

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLE 403
           D G+Y C+A+  +       T+ V+ P E
Sbjct: 305 DGGKYMCKAKNTVGEAVHYFTVIVEEPPE 333


>gi|348513041|ref|XP_003444051.1| PREDICTED: contactin-1a-like [Oreochromis niloticus]
          Length = 1095

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 193/690 (27%), Positives = 307/690 (44%), Gaps = 87/690 (12%)

Query: 30  RHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGK 87
           R  P    V      AL  + V L C   G P+P+  W K DG +P N   R++    G 
Sbjct: 315 RKYPADLRVKFPDTTALVGQNVTLECFALGNPVPEVRWKKIDGHLPSNHEVRMT----GT 370

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VT 144
            L + +V+F D G+Y CE  N  G+   ++  +SV A P +    E I++ E++     T
Sbjct: 371 QLHLYNVQFEDGGTYKCEAVNSKGK-DYHTARVSVEAFPEWV---EHISSTEKDLRSDYT 426

Query: 145 FECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLG 204
             CKASG P+P I W+ NG+P+ +           N +   +L   D+G Y C A N  G
Sbjct: 427 MSCKASGKPKPHIRWLKNGEPVDR-----------NEMRFSSLTFDDSGMYQCIAENRHG 475

Query: 205 YVYKDVYVNVLAHAPEITEAP-KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG- 262
            +Y +  + V A AP     P K         VV+ CR   APKP  +W  + + L+   
Sbjct: 476 VIYANAELRVFACAPTFERNPVKRVLAAKNGRVVIECRPKAAPKPAFSWSKDTELLSNST 535

Query: 263 RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAG 322
           R  I E G L+I +V  AD G YTCFA N  G A  +G L V + T IT  P + +V+ G
Sbjct: 536 RVFIWEDGSLEILNVTRADEGRYTCFAENDRGKANSTGDLLVMDSTKITLAPSNTDVKVG 595

Query: 323 QSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQ-----SNDYSLTVTKSSELDSG 377
           ++ + +C A  D SL ++ +W      ID   + +  +     S++  L +       +G
Sbjct: 596 ENTSMQCAASHDQSLDITFIWSLDGRVIDLHKDSQHYERTTNGSSNGELLIKNVQLKHAG 655

Query: 378 QYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQS 430
           QYTC AQT +D I A A L V+ P  AP    +I+  D K   + W       +P+S  +
Sbjct: 656 QYTCTAQTPVDNITASAHLVVRGPPGAPGGVRIIEKTD-KSVKLQWSRGADNHSPISKYT 714

Query: 431 LRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGP 490
           ++     YK Q   +     +   + V      TT VD  +P +    RV+A N    G 
Sbjct: 715 IQ-----YKDQFSNDVWKNATTFPVNVEGNAEMTTVVD-LIPWTDYEFRVIATNTLGTGD 768

Query: 491 PSEIISFVTPEGVPGTVQSLEAIPL-----------GSSAFYLKW--VKPEQPNGVLMGY 537
           PS       P  +   +++LEA+P+            S    + W  VKP+   G   GY
Sbjct: 769 PS------NPSPI---IKTLEAVPVVAPSDVGGGGGASRELTITWTPVKPKYYYGPNFGY 819

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTS--AKLAGLEPSTKYRIHLAGYTKAGDGAES- 594
            + ++     +     +R+  ++DP       K + + P T++++ +  +   G+G  S 
Sbjct: 820 IVAFKPQDEQE----WKRVA-VADPQARRYVHKASDIPPLTEFQVKVKAFNVQGEGPYSL 874

Query: 595 KYLFY----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
             + Y     P + P  VE R  +     +SW  MP    N   ++ + +W    +G++ 
Sbjct: 875 TAIIYSAQDAPAEAPAVVEARALSAKAATVSW--MPLSYSNLDGYQVK-YWE---SGQSE 928

Query: 651 NQDDVL--DWRQSELVLANQPTFQPYEIKV 678
            Q + +    R++   L N   +  Y I+V
Sbjct: 929 GQAETIGVSSRENHTKLENLRPYTEYIIEV 958



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 151/655 (23%), Positives = 247/655 (37%), Gaps = 95/655 (14%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEF------------- 134
           +L I  V+ SD+G+Y+C  S       S SI  SV +  Y  +EP+              
Sbjct: 272 NLYISKVDSSDRGNYSCIAS-------SPSISKSVFSN-YIPLEPQTERPIRKYPADLRV 323

Query: 135 ----INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
                 A   + VT EC A G P PE+ W    K     P N   ++   ++ + N++  
Sbjct: 324 KFPDTTALVGQNVTLECFALGNPVPEVRW---KKIDGHLPSNHEVRMTGTQLHLYNVQFE 380

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A NS G  Y    V+V A  PE  E              ++C+  G PKP +
Sbjct: 381 DGGTYKCEAVNSKGKDYHTARVSVEAF-PEWVEHISSTEKDLRSDYTMSCKASGKPKPHI 439

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N +         ++  +++ + + F DSG Y C A N+ G    +  L V      
Sbjct: 440 RWLKNGEP--------VDRNEMRFSSLTFDDSGMYQCIAENRHGVIYANAELRVFACAPT 491

Query: 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTK 370
            ++     V A ++           + K +  W + +E +   +  R     D SL +  
Sbjct: 492 FERNPVKRVLAAKNGRVVIECRPKAAPKPAFSWSKDTELLS--NSTRVFIWEDGSLEILN 549

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVS 427
            +  D G+YTC A+ +     +   L V    +   APSN T ++V   +   +      
Sbjct: 550 VTRADEGRYTCFAENDRGKANSTGDLLVMDSTKITLAPSN-TDVKV--GENTSMQCAASH 606

Query: 428 PQSLRGHF---------------RGYKVQTWTEKDGEGSIREL-IVNKGESTTTE---VD 468
            QSL   F               + Y+  T    +GE  I+ + + + G+ T T    VD
Sbjct: 607 DQSLDITFIWSLDGRVIDLHKDSQHYERTTNGSSNGELLIKNVQLKHAGQYTCTAQTPVD 666

Query: 469 KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPE 528
               ++    R         GPP          G PG V+ +E       +  L+W +  
Sbjct: 667 NITASAHLVVR---------GPP----------GAPGGVRIIEKT---DKSVKLQWSRGA 704

Query: 529 QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
             +  +  Y I+Y+      V       P   +       +  L P T Y   +      
Sbjct: 705 DNHSPISKYTIQYKDQFSNDVWKNATTFPVNVEGNAEMTTVVDLIPWTDYEFRVIATNTL 764

Query: 589 GDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G G  S      K L  VP   P +V G G     L I+WT +    +  P+F Y + ++
Sbjct: 765 GTGDPSNPSPIIKTLEAVPVVAPSDVGGGGGASRELTITWTPVKPKYYYGPNFGYIVAFK 824

Query: 643 RHNTGEAWNQDDVLDWRQSELV--LANQPTFQPYEIKVVQTWTEKDGEGSIRELI 695
             +  E W +  V D +    V   ++ P    +++KV     + +G  S+  +I
Sbjct: 825 PQDEQE-WKRVAVADPQARRYVHKASDIPPLTEFQVKVKAFNVQGEGPYSLTAII 878



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 144/647 (22%), Positives = 246/647 (38%), Gaps = 88/647 (13%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
            + C   G P P   W K+G P++ ++          +    + F D G Y C   N  G 
Sbjct: 427  MSCKASGKPKPHIRWLKNGEPVDRNE----------MRFSSLTFDDSGMYQCIAENRHGV 476

Query: 113  AKSYSIDLSVLA-APYFTVEP-EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAP 170
              + + +L V A AP F   P + + AA+   V  EC+    P+P   W  + + +S + 
Sbjct: 477  IYA-NAELRVFACAPTFERNPVKRVLAAKNGRVVIECRPKAAPKPAFSWSKDTELLSNST 535

Query: 171  PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
                 + G   + I N+ ++D G Y C A N  G       + V+  + +IT AP +   
Sbjct: 536  RVFIWEDG--SLEILNVTRADEGRYTCFAENDRGKANSTGDLLVM-DSTKITLAPSNTDV 592

Query: 231  VDGKTVVLTCRVFGAPKPEVNWI---------------HNQKELTGGRYTILETGDLKIT 275
              G+   + C        ++ +I               H ++   G        G+L I 
Sbjct: 593  KVGENTSMQCAASHDQSLDITFIWSLDGRVIDLHKDSQHYERTTNGS-----SNGELLIK 647

Query: 276  DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
            +V    +G+YTC A+  +     S  L V+                G     R    +D 
Sbjct: 648  NVQLKHAGQYTCTAQTPVDNITASAHLVVRG-------------PPGAPGGVRIIEKTDK 694

Query: 336  SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ--TELDFI--- 390
            S+KL   W RG++     S+      + +S  V K++          A+  T +D I   
Sbjct: 695  SVKLQ--WSRGADNHSPISKYTIQYKDQFSNDVWKNATTFPVNVEGNAEMTTVVDLIPWT 752

Query: 391  --EAQATLTVQVPLEAPSNFT-LIQVIDA----------------KKAVVSWNPVSPQSL 431
              E +   T  +    PSN + +I+ ++A                ++  ++W PV P+  
Sbjct: 753  DYEFRVIATNTLGTGDPSNPSPIIKTLEAVPVVAPSDVGGGGGASRELTITWTPVKPKYY 812

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
             G   GY V    + + E     +   +      +     P ++   +V AFN    GP 
Sbjct: 813  YGPNFGYIVAFKPQDEQEWKRVAVADPQARRYVHKASDIPPLTEFQVKVKAFNVQGEGPY 872

Query: 492  SEIISFVTPEGVPGTVQSL-EAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVG 550
            S      + +  P    ++ EA  L + A  + W+     N  L GY++KY    G   G
Sbjct: 873  SLTAIIYSAQDAPAEAPAVVEARALSAKAATVSWMPLSYSN--LDGYQVKYWE-SGQSEG 929

Query: 551  PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDN--- 607
               E +   S    T  KL  L P T+Y I + GY  AG G  S +   +  K P +   
Sbjct: 930  -QAETIGVSSRENHT--KLENLRPYTEYIIEVRGYNSAGYGPPSHHFRVLTKKPPPDRAP 986

Query: 608  -VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR--RHNTGEAWN 651
             +  +     ++ I+W  +  + + +    YR+ +R     TG  +N
Sbjct: 987  KIIAKKVKGQSINIAWEQVEPMANESSIEGYRVLYRPEGQTTGTLYN 1033



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 107/285 (37%), Gaps = 44/285 (15%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  +T  C+A   P     W  +   I          +    + I 
Sbjct: 122 PVDTIYPE---ESPEAKITMNCRARANPPATYKWKLDHMEIDLNAEGSHYSLAGGNLVIS 178

Query: 186 NLRKS-DTGNYGCNATNSLGYVYKDV------YVNVLAHAPEITEAPKDEYTVDGKTVVL 238
           N  K+   G Y C ATN+ G V          Y+++ +     +E     Y  +G+  VL
Sbjct: 179 NPDKTVHVGKYSCLATNTYGTVISREASVQFGYLDLFS-----SEERSSVYVKEGQGAVL 233

Query: 239 TCRVFGAPKPE------VNWIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCF 288
            C    AP P         WI N+          R+    TG+L I+ V  +D G Y+C 
Sbjct: 234 LC----APPPHYPAELSFRWILNEFPTFIIPDKRRFVSQITGNLYISKVDSSDRGNYSCI 289

Query: 289 ARN-KLGTAQGSGSLTVKEHTH--ITDQPEDYEVE-------AGQSATFRCNAVSDPSLK 338
           A +  +  +  S  + ++  T   I   P D  V+        GQ+ T  C A+ +P  +
Sbjct: 290 ASSPSISKSVFSNYIPLEPQTERPIRKYPADLRVKFPDTTALVGQNVTLECFALGNPVPE 349

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +    + G  P + E      Q + Y++        D G Y C A
Sbjct: 350 VRWKKIDGHLPSNHEVRMTGTQLHLYNVQFE-----DGGTYKCEA 389



 Score = 41.6 bits (96), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 71/183 (38%), Gaps = 12/183 (6%)

Query: 214 VLAHAPEITEAPKD----EYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL---TGGRYTI 266
           V  + P   E P D    E + + K + + CR    P     W  +  E+     G +  
Sbjct: 111 VTGYGPVFEEQPVDTIYPEESPEAK-ITMNCRARANPPATYKWKLDHMEIDLNAEGSHYS 169

Query: 267 LETGDLKITDV-AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQ 323
           L  G+L I++       G+Y+C A N  GT     +     +  +  +++     V+ GQ
Sbjct: 170 LAGGNLVISNPDKTVHVGKYSCLATNTYGTVISREASVQFGYLDLFSSEERSSVYVKEGQ 229

Query: 324 SATFRCNAVSDPSLKLSIVWLRGSEP-IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCR 382
            A   C        +LS  W+    P      + RFV     +L ++K    D G Y+C 
Sbjct: 230 GAVLLCAPPPHYPAELSFRWILNEFPTFIIPDKRRFVSQITGNLYISKVDSSDRGNYSCI 289

Query: 383 AQT 385
           A +
Sbjct: 290 ASS 292


>gi|1305527|gb|AAA99159.1| L1-like cell adhesion molecule antigen E587 [Carassius auratus]
          Length = 1232

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 157/513 (30%), Positives = 250/513 (48%), Gaps = 26/513 (5%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           + LR + + L CI  G P P+  W +   P++P+ R+    Y + L I+ V  +D G YT
Sbjct: 222 LVLRGQTLTLECIPEGLPTPEVQWERMDSPLSPA-RVRWLKYKRWLQIESVSEADDGEYT 280

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G  K +   ++V AAPY+T  PE    A  ETV  +C+A G+P P I W  NG
Sbjct: 281 CTAQNSQGSVKHH-YAVTVEAAPYWTRRPENHLYAPGETVRLDCQAEGIPTPNITWSMNG 339

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            PI+   P+PRR V    + + +++ SDT  Y   ATN  G +  + +V+V+   P+I  
Sbjct: 340 APIAGTDPDPRRHVSSGTLILTDVQISDTAVYHVEATNKHGNILINTHVHVVELPPQILT 399

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFA 280
               +Y   +G+TV+L CR FG+P+P+V+W   ++   L   + +    G+L+I+DV+  
Sbjct: 400 EDDLKYEATEGQTVLLQCRTFGSPQPKVDWQITNSGPALANAKMSQTSDGNLQISDVSEE 459

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL- 339
           DS  YTC           S  L V   T I D P+D  V  G  A  +C    D  LK  
Sbjct: 460 DSSMYTCSVST--SNMSISAELVVLNRTKIVDPPQDLRVLRGDDAVLQCRYTVDHMLKQP 517

Query: 340 SIVWLRGSEPIDFES-EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           +I W +    I   + + ++ +S D SL +T     DSG Y+C   T+LD + A  ++ V
Sbjct: 518 TIQWKKDKHKITSSANDDKYTESPDGSLKITDVQMEDSGIYSCEISTKLDSVSATGSIVV 577

Query: 399 QVPLEAPSNFTLIQVIDAKKAVV--SWNPVSPQSLRGHFRGYKVQTWTEKD-GEGSIREL 455
              L+ P +   +++ + K+  V  SW P +  +       Y ++   +++ G+G   E 
Sbjct: 578 ---LDKPGSPHSLELSEKKERSVTLSWMPGAENN--SPISEYVIERKEKQNPGKGHWEEY 632

Query: 456 IVNKGESTTTEVDKFVPASKNFARVLAFNG---AYNGPPSEIISFVTPEGVPG-TVQSLE 511
                + T  E+    P S    RV   NG   +   PPSE  S+ TP   P    +++ 
Sbjct: 633 RRVPQDITHLEI-HLQPYSTYHFRVRGVNGIGMSEPSPPSE--SYSTPAAKPDMNPENVT 689

Query: 512 AIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQ 542
           ++   S++  + W + EQ   NG    YKI ++
Sbjct: 690 SVSTDSNSLVITWQELEQRQFNGPGFKYKIYWR 722



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 143/568 (25%), Positives = 229/568 (40%), Gaps = 70/568 (12%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
           +T+T EC   GLP PE+ W     P+S  P   R       + IE++ ++D G Y C A 
Sbjct: 227 QTLTLECIPEGLPTPEVQWERMDSPLS--PARVRWLKYKRWLQIESVSEADDGEYTCTAQ 284

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT 260
           NS G V     V V A AP  T  P++     G+TV L C+  G P P + W  N   + 
Sbjct: 285 NSQGSVKHHYAVTVEA-APYWTRRPENHLYAPGETVRLDCQAEGIPTPNITWSMNGAPIA 343

Query: 261 GG-----RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP- 314
           G      R+  + +G L +TDV  +D+  Y   A NK       G++ +  H H+ + P 
Sbjct: 344 GTDPDPRRH--VSSGTLILTDVQISDTAVYHVEATNK------HGNILINTHVHVVELPP 395

Query: 315 ----ED---YEVEAGQSATFRCNAVSDPSLKLSIVW-LRGSEPIDFESEPRFVQSNDYSL 366
               ED   YE   GQ+   +C     P  K+   W +  S P    +  +  Q++D +L
Sbjct: 396 QILTEDDLKYEATEGQTVLLQCRTFGSPQPKVD--WQITNSGPA--LANAKMSQTSDGNL 451

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPV 426
            ++  SE DS  YTC   T    I A+  +  +  +  P     ++V+    AV+     
Sbjct: 452 QISDVSEEDSSMYTCSVSTSNMSISAELVVLNRTKIVDPPQD--LRVLRGDDAVLQC--- 506

Query: 427 SPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV----LA 482
             +    H        W  K  +  I         +++   DK+  +     ++    + 
Sbjct: 507 --RYTVDHMLKQPTIQW--KKDKHKI---------TSSANDDKYTESPDGSLKITDVQME 553

Query: 483 FNGAYNGPPSEIISFVTPEGV------PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMG 536
            +G Y+   S  +  V+  G       PG+  SLE       +  L W+   + N  +  
Sbjct: 554 DSGIYSCEISTKLDSVSATGSIVVLDKPGSPHSLELSEKKERSVTLSWMPGAENNSPISE 613

Query: 537 YKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-- 594
           Y I+ +  +    G   E   Y   P   +     L+P + Y   + G    G    S  
Sbjct: 614 YVIERKEKQNPGKGHWEE---YRRVPQDITHLEIHLQPYSTYHFRVRGVNGIGMSEPSPP 670

Query: 595 ----KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
                     P  NP+NV    +  N+LVI+W  + + + N P FKY+I+WR+      W
Sbjct: 671 SESYSTPAAKPDMNPENVTSVSTDSNSLVITWQELEQRQFNGPGFKYKIYWRQEGDSH-W 729

Query: 651 NQDDVLDWRQSELVLANQPTFQPYEIKV 678
            +           ++    TF P++IKV
Sbjct: 730 MESSA---SNPPFIVEGPGTFIPFQIKV 754



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 92/206 (44%), Gaps = 18/206 (8%)

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIREL---- 455
           +PLEAPS+  + + ++    +V W+PVS +S+RGH  GYK+    +     S R L    
Sbjct: 777 LPLEAPSSVAVSE-LNKTTVLVKWSPVSTKSVRGHLLGYKIHVRKKGPRAHSQRGLPMQE 835

Query: 456 --------IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGT 506
                   IV  G      +      S     V  FN    GP S+  I+  TPEG PG 
Sbjct: 836 PAAERNRVIVANGNKEEMVLSDLHFHSNYTLTVAPFNSKGEGPHSKRRITLATPEGAPGP 895

Query: 507 VQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK-YQSVKGTKVGPLLERLPYISDPTTT 565
           +  L       +   L+W  P++PNGVL GY ++ Y+ V G+       ++  ++ P  T
Sbjct: 896 LSFLTFESPSETEITLRWGAPDKPNGVLTGYLLQYYEPVPGSSS---THQMKSLNLPLDT 952

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDG 591
              L  L P  +Y   L   T AG G
Sbjct: 953 EYTLKDLNPQIQYHFSLRALTAAGHG 978



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 121/301 (40%), Gaps = 39/301 (12%)

Query: 125 APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
           AP  TV+P    A   + V   C+ASG P P   WV +GK         R  +    +T 
Sbjct: 14  APTITVQPVSHTAFSLDDVILACEASGDPAPSFRWVKDGKEFK------RELLSSGTLTA 67

Query: 185 ENLRKSD--TGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV--DGKTVVLTC 240
           E+  +     G+Y C    SLG    D+   +    P + +  + +     +G + VL C
Sbjct: 68  EDKEELHPIQGSYRCYVM-SLGTAVSDLAQLITEPIPTLAKEKRQKTRSFEEGDSAVLYC 126

Query: 241 RVFGAPK----PEVNW--IHNQKELTGGRYTILETGDLKITDVAFADSGE-YTCFA---- 289
                PK    P+++W  +H +      R T    G+L   ++   DS E YTC A    
Sbjct: 127 ---NPPKSSVTPKIHWMDMHWRHIPLNERVTTSLDGNLYFANLLVNDSREDYTCNAHIIN 183

Query: 290 ------RNKLGTAQGSGSLTVKEHTHITDQP----EDYEVEAGQSATFRCNAVSDPSLKL 339
                 + ++  +    +  +K       +P      Y V  GQ+ T  C     P+ + 
Sbjct: 184 ASVILPKERISISVTPSNSVLKNRRPQLQKPAGSHSSYLVLRGQTLTLECIPEGLPTPE- 242

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            + W R   P+   +  R+++   + L +   SE D G+YTC AQ     ++    +TV+
Sbjct: 243 -VQWERMDSPLS-PARVRWLKYKRW-LQIESVSEADDGEYTCTAQNSQGSVKHHYAVTVE 299

Query: 400 V 400
            
Sbjct: 300 A 300



 Score = 40.4 bits (93), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 46/121 (38%), Gaps = 9/121 (7%)

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKI 274
           L  AP IT  P          V+L C   G P P   W+ + KE    +  +L +G L  
Sbjct: 11  LKQAPTITVQPVSHTAFSLDDVILACEASGDPAPSFRWVKDGKEF---KRELLSSGTLTA 67

Query: 275 TDVA--FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEV---EAGQSATFRC 329
            D        G Y C+  + LGTA    +  + E      + +  +    E G SA   C
Sbjct: 68  EDKEELHPIQGSYRCYVMS-LGTAVSDLAQLITEPIPTLAKEKRQKTRSFEEGDSAVLYC 126

Query: 330 N 330
           N
Sbjct: 127 N 127


>gi|317418903|emb|CBN80941.1| Neurofascin, partial [Dicentrarchus labrax]
          Length = 1241

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 116/347 (33%), Positives = 183/347 (52%), Gaps = 10/347 (2%)

Query: 56  IFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKS 115
            F  +P P   W K G  + P+ ++   NY K+L I +V   D G Y C  +N +G  + 
Sbjct: 194 FFLTSPTPTVKWFKKGGDL-PARKVKFENYNKTLKIINVSEEDAGEYVCMANNHLGSIR- 251

Query: 116 YSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           +SI + V AAPY+  +P  +  A +E     C+A+G P+P I W+ NG+P+  +PPNP R
Sbjct: 252 HSIFVQVKAAPYWLDKPTNLVLAPDENGRLVCRANGNPKPNIQWLINGQPVESSPPNPSR 311

Query: 176 KVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY--TVDG 233
           +   + I   +++   +  Y CNA+N  GY+  + +V+VL   P +   PK++    ++ 
Sbjct: 312 QELGDTIIFRSVQMGSSAVYQCNASNQHGYLLANAFVSVLDMPPRML-GPKNQLIKVIEN 370

Query: 234 KTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFADSGEYTCFARN 291
               L C  FG+P PE+ W  N +   L GG+Y +   G L+I      D G YTC A +
Sbjct: 371 NRTFLDCPFFGSPLPELRWFKNGQGSGLDGGQYRVYINGTLEIKRARAEDEGTYTCLANS 430

Query: 292 KLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID 351
            LG+A+    L VKE T I   PE      G +A F C   SDP+L +++ W +  +P++
Sbjct: 431 ILGSAENQVRLEVKEPTRIVRAPEHQSAIRGSTARFNCKVKSDPTLPITVTWTKDDKPLN 490

Query: 352 FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
                  ++ ++ SLT+   +E D G Y+C  ++E+D   A A LTV
Sbjct: 491 MGWR---LRKDEESLTIPNVNEGDEGTYSCTVKSEIDQDSASARLTV 534



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 149/631 (23%), Positives = 245/631 (38%), Gaps = 83/631 (13%)

Query: 15  ILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI 74
           +L N   + +        PK Q +       + N +  L C F G+PLP+  W K+G   
Sbjct: 342 LLANAFVSVLDMPPRMLGPKNQLIK-----VIENNRTFLDCPFFGSPLPELRWFKNG--- 393

Query: 75  NPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV 130
                +  G Y      +L IK     D+G+YTC  ++ +G A++  + L V        
Sbjct: 394 -QGSGLDGGQYRVYINGTLEIKRARAEDEGTYTCLANSILGSAEN-QVRLEVKEPTRIVR 451

Query: 131 EPEFINAAEEETVTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLR 188
            PE  +A    T  F CK    P   I   W  + KP++      R +     +TI N+ 
Sbjct: 452 APEHQSAIRGSTARFNCKVKSDPTLPITVTWTKDDKPLNMGW---RLRKDEESLTIPNVN 508

Query: 189 KSDTGNYGCNATNSLGYVYKDVYVNVLAHA---PEITEAPKDEYTVDGKTVVLTCRVFGA 245
           + D G Y C   + +        + VL  A   P ++ A   +       + L+     A
Sbjct: 509 EGDEGTYSCTVKSEIDQDSASARLTVLEEASLNPSVSSALPPDRPDPPIDLDLSDP--AA 566

Query: 246 PKPEVNWI---------------HNQKELTGGRYTILET--GDLK--ITDVAFADSGEYT 286
               + WI                 +     GR+  L T  GDL   I  +A   + ++ 
Sbjct: 567 RSIRLTWIPGNDHRSPVTQFLVQFEENRWEPGRWQNLSTYPGDLNSVILQLAPFVNYQFR 626

Query: 287 CFARNKLGTAQGSG-SLTVKEHTHITD-----------QPEDYEVEAGQSATFRCNAVSD 334
             A N +G ++ S  SL  K      D           + ++ E+          N    
Sbjct: 627 VIAINSVGQSKPSRPSLRYKTSGAAPDAIPKGLRGWGSKKDNMEISWEPLLDLERNG--- 683

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           P+L+ ++ W R     + E E   V + +    V  +      +   +A  E        
Sbjct: 684 PNLRYNVWWRRK----ELEEEWNNVTTMESKYVVQNTETYVPYEIKIQAMNEFGPGPESN 739

Query: 395 TLT----VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG 450
            +T       P +AP++  + +V D   A + W PV   S++G F+ Y++  W E     
Sbjct: 740 VVTGYSGEDKPTDAPTDLQMSKV-DDTTAHIHWKPVDLNSVQGEFKEYRLYYWRE---SS 795

Query: 451 SIRELIVNKGEST----------TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 500
            +  L+V+K + T          +  +   VP SK    ++  N  + GPPS  + F T 
Sbjct: 796 LVPGLVVSKEKKTKGFYSTVAGPSGILSDLVPYSKYKMFMVVANNRFEGPPSNTVEFTTK 855

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560
           EGVP   +            +L+W KP +PNG+L+ Y++KY +V G++VG       Y  
Sbjct: 856 EGVPDAPRFFRINRRSFDTIHLQWDKPLEPNGILIAYQLKYHTVNGSRVGHTQLETFY-- 913

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            P  T   L   + ST+Y+  L+  T  G G
Sbjct: 914 -PNVTDFSLRLPDRSTRYKFFLSARTTVGAG 943



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 130/548 (23%), Positives = 214/548 (39%), Gaps = 42/548 (7%)

Query: 153 PEPEIHWVHNGKPISQAPPNPRRKVG----PNRITIENLRKSDTGNYGCNATNSLGYVYK 208
           P P + W   G  +      P RKV        + I N+ + D G Y C A N LG +  
Sbjct: 199 PTPTVKWFKKGGDL------PARKVKFENYNKTLKIINVSEEDAGEYVCMANNHLGSIRH 252

Query: 209 DVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTI 266
            ++V V A AP   + P +      +   L CR  G PKP + W+ N +  E +    + 
Sbjct: 253 SIFVQVKA-APYWLDKPTNLVLAPDENGRLVCRANGNPKPNIQWLINGQPVESSPPNPSR 311

Query: 267 LETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA--GQ 323
            E GD  I   V    S  Y C A N+ G    +  ++V +       P++  ++     
Sbjct: 312 QELGDTIIFRSVQMGSSAVYQCNASNQHGYLLANAFVSVLDMPPRMLGPKNQLIKVIENN 371

Query: 324 SATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
                C     P  +L   W +  +    +     V  N  +L + ++   D G YTC A
Sbjct: 372 RTFLDCPFFGSPLPELR--WFKNGQGSGLDGGQYRVYING-TLEIKRARAEDEGTYTCLA 428

Query: 384 QTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAK-KAVVSWNPVSPQSLRGHFRGYK 439
            + L   E Q  L V+ P   + AP + + I+   A+    V  +P  P ++        
Sbjct: 429 NSILGSAENQVRLEVKEPTRIVRAPEHQSAIRGSTARFNCKVKSDPTLPITVTWTKDDKP 488

Query: 440 VQT-WTEKDGEGSIRELIVNKGESTT--TEVDKFVPASKNFARVLAFNGAYNGPPSEIIS 496
           +   W  +  E S+    VN+G+  T    V   +      AR+     A   P    +S
Sbjct: 489 LNMGWRLRKDEESLTIPNVNEGDEGTYSCTVKSEIDQDSASARLTVLEEASLNPS---VS 545

Query: 497 FVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERL 556
              P   P     L+     + +  L W+        +  + ++++  +  + G      
Sbjct: 546 SALPPDRPDPPIDLDLSDPAARSIRLTWIPGNDHRSPVTQFLVQFEENRW-EPGRWQNLS 604

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-YLFY-----VPFKNPDNVEG 610
            Y  D  +   +LA   P   Y+  +      G    S+  L Y      P   P  + G
Sbjct: 605 TYPGDLNSVILQLA---PFVNYQFRVIAINSVGQSKPSRPSLRYKTSGAAPDAIPKGLRG 661

Query: 611 RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT 670
            GS  +N+ ISW  + ++E N P+ +Y ++WRR    E WN    +   +S+ V+ N  T
Sbjct: 662 WGSKKDNMEISWEPLLDLERNGPNLRYNVWWRRKELEEEWNNVTTM---ESKYVVQNTET 718

Query: 671 FQPYEIKV 678
           + PYEIK+
Sbjct: 719 YVPYEIKI 726



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 103/264 (39%), Gaps = 8/264 (3%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L C   G P P   W  +G P+  S    S+   G ++I + V+      Y C  SN  
Sbjct: 280 RLVCRANGNPKPNIQWLINGQPVESSPPNPSRQELGDTIIFRSVQMGSSAVYQCNASNQH 339

Query: 111 GEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQ 168
           G   + +  +SVL  P   + P  + I   E      +C   G P PE+ W  NG+    
Sbjct: 340 GYLLANAF-VSVLDMPPRMLGPKNQLIKVIENNRTFLDCPFFGSPLPELRWFKNGQGSGL 398

Query: 169 APPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
                R  +    + I+  R  D G Y C A + LG     V + V      I  AP+ +
Sbjct: 399 DGGQYRVYIN-GTLEIKRARAEDEGTYTCLANSILGSAENQVRLEV-KEPTRIVRAPEHQ 456

Query: 229 YTVDGKTVVLTCRVFGAPKP--EVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYT 286
             + G T    C+V   P     V W  + K L  G     +   L I +V   D G Y+
Sbjct: 457 SAIRGSTARFNCKVKSDPTLPITVTWTKDDKPLNMGWRLRKDEESLTIPNVNEGDEGTYS 516

Query: 287 CFARNKLGTAQGSGSLTVKEHTHI 310
           C  ++++     S  LTV E   +
Sbjct: 517 CTVKSEIDQDSASARLTVLEEASL 540


>gi|47222083|emb|CAG12109.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1292

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 137/410 (33%), Positives = 188/410 (45%), Gaps = 46/410 (11%)

Query: 31  HAPKQQYV--TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKS 88
           H PK  Y   +   ++ LR + +EL CI  G P P   W KDG  + PS R+S   Y K+
Sbjct: 443 HQPKFMYPLGSTSTKMVLRGETLELECIAEGLPTPDISWQKDGGEL-PSGRVSIQTYQKT 501

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKS-----------------------------YSID 119
           L I  V  +D G Y C  +N +G A                               YS  
Sbjct: 502 LKISDVVETDAGEYRCTATNRLGTAHHIIQVTVKGRRPFWRQVVEESPLRVGLQCRYSTF 561

Query: 120 LSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGP 179
             + AAP++   P  +  A  ET    C+  G P+P+I W  NG  +  AP + RR V  
Sbjct: 562 HPLTAAPFWISAPRNLILAPNETGILTCRVGGDPKPKITWFINGVSMENAPEDHRRSVDG 621

Query: 180 NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVL 238
           + + + N++   +  Y CNA+N  GY+  + +VNVLA AP I   P   Y V      +L
Sbjct: 622 DTVILSNVQSGSSAVYQCNASNEFGYLMANAFVNVLAEAPRILTPPNQVYQVITNNPALL 681

Query: 239 TCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTA 296
            C  FG+P P + W  + +    +G  Y I E G L+I      +SG+YTC A N LG  
Sbjct: 682 HCASFGSPIPVITWFKDVQTSVKSGDPYVIHENGTLEIHVAQLVNSGKYTCIATNNLGIK 741

Query: 297 QGSGSLTVK--------EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
           +    L VK        E T I  QPE   V+ G SA F C    DP+L  ++ WL+ S 
Sbjct: 742 ENHVFLEVKAGAFLSTSEPTRILKQPEYKVVQRGMSAAFECKVKHDPTLIPTMTWLKDSG 801

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             +   + RFV   D +LT+   ++ D G YTC   T LD   A A LTV
Sbjct: 802 --ELPDDERFVVDAD-TLTIMDVTDRDKGTYTCFMNTSLDHDSASAVLTV 848



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 144/554 (25%), Positives = 217/554 (39%), Gaps = 54/554 (9%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVG 111
            L C  GG P P+  W  +GV + N  +   +   G ++I+ +V+      Y C  SN  G
Sbjct: 587  LTCRVGGDPKPKITWFINGVSMENAPEDHRRSVDGDTVILSNVQSGSSAVYQCNASNEFG 646

Query: 112  EAKSYSIDLSVLA-APYFTVEP-EFINAAEEETVTFECKASGLPEPEIHWVHNGK-PISQ 168
               + +  ++VLA AP     P +             C + G P P I W  + +  +  
Sbjct: 647  YLMANAF-VNVLAEAPRILTPPNQVYQVITNNPALLHCASFGSPIPVITWFKDVQTSVKS 705

Query: 169  APPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP--- 225
              P    + G   I +  L  S  G Y C ATN+LG     V++ V A A   T  P   
Sbjct: 706  GDPYVIHENGTLEIHVAQLVNS--GKYTCIATNNLGIKENHVFLEVKAGAFLSTSEPTRI 763

Query: 226  --KDEYTV--DGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRYTILETGDLKITDVAF 279
              + EY V   G +    C+V   P   P + W+ +  EL      +++   L I DV  
Sbjct: 764  LKQPEYKVVQRGMSAAFECKVKHDPTLIPTMTWLKDSGELPDDERFVVDADTLTIMDVTD 823

Query: 280  ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
             D G YTCF    L     S  LTV E      Q ED   + G        A +  + +L
Sbjct: 824  RDKGTYTCFMNTSLDHDSASAVLTVVE---FLVQYEDLLHQPGVWTNLTEVAGTSTTAQL 880

Query: 340  SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            S+              P       YS  V   + L    Y+  +Q    +    A     
Sbjct: 881  SL-------------SPHVY----YSFRVLAMNHLG---YSDPSQPSNQYRTNPA----- 915

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE--KDGEGSIRELIV 457
             P + P++   +   +    V+SW P++     G    Y+VQ W +   D + S R  + 
Sbjct: 916  APDQNPADVKGLGT-EPGNLVISWTPLTGFQSNGPGLEYRVQ-WRQMNMDEDWSTRN-VA 972

Query: 458  NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS 517
            N  +   +    +  AS    RV A N   +GP  E +   + E  PG    L  I    
Sbjct: 973  NGSQFVVSGTPTY--ASYQI-RVQAINDYGSGPEPETVIGYSGEDFPGRPSFLNIINPSL 1029

Query: 518  SAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTK 577
             +  L+W  P Q NG L+GY +KYQ V  T      +   ++++ TT +  L  L  S  
Sbjct: 1030 DSLTLEWGPPLQHNGRLVGYTLKYQPVNSTHELEPPKVRTFLANETTFT--LDNLNSSML 1087

Query: 578  YRIHLAGYTKAGDG 591
            Y+ +L+  T  G G
Sbjct: 1088 YKFYLSAKTIKGSG 1101



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 119/298 (39%), Gaps = 47/298 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT--IENLRKSDTGNYGCN 198
           ET+  EC A GLP P+I W  +G  +    P+ R  +   + T  I ++ ++D G Y C 
Sbjct: 463 ETLELECIAEGLPTPDISWQKDGGEL----PSGRVSIQTYQKTLKISDVVETDAGEYRCT 518

Query: 199 ATNSLGYVYKDVYVNV-----------------------------LAHAPEITEAPKDEY 229
           ATN LG  +  + V V                             L  AP    AP++  
Sbjct: 519 ATNRLGTAHHIIQVTVKGRRPFWRQVVEESPLRVGLQCRYSTFHPLTAAPFWISAPRNLI 578

Query: 230 TVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG----RYTILETGDLKI-TDVAFADSGE 284
               +T +LTCRV G PKP++ W  N   +       R ++   GD  I ++V    S  
Sbjct: 579 LAPNETGILTCRVGGDPKPKITWFINGVSMENAPEDHRRSV--DGDTVILSNVQSGSSAV 636

Query: 285 YTCFARNKLGTAQGSGSLTV-KEHTHITDQPED-YEVEAGQSATFRCNAVSDPSLKLSIV 342
           Y C A N+ G    +  + V  E   I   P   Y+V     A   C +   P     I 
Sbjct: 637 YQCNASNEFGYLMANAFVNVLAEAPRILTPPNQVYQVITNNPALLHCASFGSPI--PVIT 694

Query: 343 WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           W +  +      +P  +  N  +L +  +  ++SG+YTC A   L   E    L V+ 
Sbjct: 695 WFKDVQTSVKSGDPYVIHENG-TLEIHVAQLVNSGKYTCIATNNLGIKENHVFLEVKA 751



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAG--DGAESKYLFY----VPFKNPDNVEGRGSTPN 616
           T+T+A+L+ L P   Y   +      G  D ++    +      P +NP +V+G G+ P 
Sbjct: 874 TSTTAQLS-LSPHVYYSFRVLAMNHLGYSDPSQPSNQYRTNPAAPDQNPADVKGLGTEPG 932

Query: 617 NLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEI 676
           NLVISWT +   + N P  +YR+ WR+ N  E W+  +V +   S+ V++  PT+  Y+I
Sbjct: 933 NLVISWTPLTGFQSNGPGLEYRVQWRQMNMDEDWSTRNVAN--GSQFVVSGTPTYASYQI 990

Query: 677 KV 678
           +V
Sbjct: 991 RV 992



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 106/288 (36%), Gaps = 45/288 (15%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIE---NLRKSDTGNYG 196
           E +   C+A G P P   W  NG     +       K G   + I+      ++  G Y 
Sbjct: 240 ENIVIHCEAKGKPHPSFSWTRNGTHFDVEKDSKVLMKPGSGTLVIDISGEKAEAYEGTYQ 299

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCR-VFGAPKPEVNWIH 254
           C A N  G    +  V   + +P  ++   +   V  G ++VL CR   G P P + W+ 
Sbjct: 300 CTAQNDHGTAVSNKIVIRQSRSPLWSKERNEAVVVQKGVSLVLQCRPPAGLPPPVIFWMD 359

Query: 255 N--QKELTGGRYTILETGDLKITDVAFADSG-EYTCFAR-NKLGTAQGSGSL-------- 302
           N   +     R +    GDL  ++V   DS  +Y C+AR     T Q    +        
Sbjct: 360 NNFHRLPLDKRVSQALNGDLYFSNVLPEDSRPDYICYARFPHTQTIQQKQPISVTVLDIE 419

Query: 303 ----TVKEHTHITDQPED-------------------YEVEAGQSATFRCNAVSDPSLKL 339
               TV    +ITD P D                     V  G++    C A   P+  +
Sbjct: 420 RVNETVAAFYNITDFPPDNPEGDHQPKFMYPLGSTSTKMVLRGETLELECIAEGLPTPDI 479

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
           S  W +     +  S    +Q+   +L ++   E D+G+Y C A   L
Sbjct: 480 S--WQKDGG--ELPSGRVSIQTYQKTLKISDVVETDAGEYRCTATNRL 523


>gi|297273516|ref|XP_001087501.2| PREDICTED: protein sidekick-2 [Macaca mulatta]
          Length = 2037

 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 175/605 (28%), Positives = 255/605 (42%), Gaps = 32/605 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V     +V L C+    PL +   IW KDG+ +  S  IS  N  + L I +   S
Sbjct: 112 KNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGMLL--SGGISDHN--RRLTIPNPTGS 167

Query: 98  DQGSYTCEVSNGVGEAKSY--SIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPE 154
           D G Y CE         S      LSVL  P F  EPE  I A  E+ V   C+A G+P 
Sbjct: 168 DAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQFVKEPERHITAEMEKVVDIPCRAKGVPP 227

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
           P I W  +   +        R+     + I  L   DTG + C A N+ G V    Y+ V
Sbjct: 228 PSITWYKDAAVVEVEKLARFRQRSDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAV 287

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILET 269
            + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T LE+
Sbjct: 288 TSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLES 347

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+  C
Sbjct: 348 GSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVC 407

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
               DP + +  +W +    +  ES PR     + SL ++++   D G YTCR  +    
Sbjct: 408 GVSHDPRVTVRYIWEKDGATLGVESNPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGN 467

Query: 390 IEAQATLTVQVPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
               A L V+    AP +    +  ++ +   ++W    P         Y ++  +E + 
Sbjct: 468 DSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWT--KPFDGNSPLLRYVLEM-SENNA 524

Query: 449 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ 508
             +I    V+  ++T+  V   VPA     R+ A N    G  S+    V+    P T  
Sbjct: 525 PWTILLASVDP-KATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAP 583

Query: 509 SLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT 564
               I  G +  +  ++W  P +   NG+L GY I++       V P+  +   I+D   
Sbjct: 584 PQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRW----CMPVVPVGYQFKNITDADV 639

Query: 565 TSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLV 619
            +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    +    + 
Sbjct: 640 NNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIR 699

Query: 620 ISWTA 624
            +W A
Sbjct: 700 FTWNA 704



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 179/685 (26%), Positives = 270/685 (39%), Gaps = 76/685 (11%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K Q V+  +   +   ++  F      P PQ  W +DG  I PS RI+      +L+I  
Sbjct: 9   KHQSVSHGEAAVIHAPRIASF------PRPQVTWFRDGRKIPPSSRIAI-TLENTLVILS 61

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV---LAAPYFTVEPEFINAAEEET------ 142
               D G Y  + V++  G+ K S  I L+V   +  P   + P  I   +  +      
Sbjct: 62  TVAPDAGRYYVQAVNDKNGDNKTSQPITLAVERDVGGPADPIAPTIIIPPKNTSVVAGTS 121

Query: 143 -VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA 199
            VT EC A+  P  ++H  W  +G  +S    +  R     R+TI N   SD G Y C A
Sbjct: 122 EVTLECVANARPLIKLHIIWKKDGMLLSGGISDHNR-----RLTIPNPTGSDAGYYECEA 176

Query: 200 ---TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHN 255
              ++S+  V +  Y++VL   P+  + P+   T + + VV + CR  G P P + W  +
Sbjct: 177 VLRSSSVPSVVRGAYLSVL-EPPQFVKEPERHITAEMEKVVDIPCRAKGVPPPSITWYKD 235

Query: 256 QKEL---TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHIT 311
              +      R+     G L+I+ +   D+G + CFARN  G  Q S  L V     +IT
Sbjct: 236 AAVVEVEKLARFRQRSDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAVTSIAPNIT 295

Query: 312 DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVT 369
             P D  V  G S    C     P  + +I W +G   +   S   PRF      SL ++
Sbjct: 296 RGPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTPLESGSLLIS 353

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAV-VSWNP 425
            +   D+G YTC A       EA A L V       + P + ++I+   A     VS +P
Sbjct: 354 PTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVCGVSHDP 413

Query: 426 -VSPQSL---RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV- 480
            V+ + +    G   G +       D  GS+       G+  T    + + A  N +R  
Sbjct: 414 RVTVRYIWEKDGATLGVESNPRIRLDRNGSLHISQTWSGDIGTYTC-RVISAGGNDSRSA 472

Query: 481 -LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKI 539
            L      + P   + +  T E                 A  L W KP   N  L+ Y +
Sbjct: 473 HLRVRQLPHAPEHPVATLSTVE---------------RRAINLTWTKPFDGNSPLLRYVL 517

Query: 540 KYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY 599
           +  S        LL  +    DP  TS  + GL P+  Y+  L      G G  SK    
Sbjct: 518 E-MSENNAPWTILLASV----DPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTER 572

Query: 600 V------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQD 653
           V      P   P NV   G T  +++I W   PE   N     Y I W        +   
Sbjct: 573 VSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRWCMPVVPVGYQFK 632

Query: 654 DVLDWRQSELVLANQPTFQPYEIKV 678
           ++ D   + L+L +   +  YEI+V
Sbjct: 633 NITDADVNNLLLEDLIIWTNYEIEV 657



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 140/629 (22%), Positives = 229/629 (36%), Gaps = 73/629 (11%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           K V++ C   G P P   W KD   V +    R  Q + G  L I  +   D G + C  
Sbjct: 214 KVVDIPCRAKGVPPPSITWYKDAAVVEVEKLARFRQRSDG-GLQISGLVPDDTGMFQCFA 272

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPI 166
            N  GE ++ +       AP  T  P      +  +V   C+ SG P P I W    + +
Sbjct: 273 RNAAGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERIL 332

Query: 167 SQAPPN-PR-RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           +      PR   +    + I     SD G Y C ATNS G       + V A    IT+ 
Sbjct: 333 ASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWART-RITKP 391

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDVAF 279
           P+D+  + G    + C V   P+  V +I  +   T G     R  +   G L I+    
Sbjct: 392 PQDQSVIKGTQASMVCGVSHDPRVTVRYIWEKDGATLGVESNPRIRLDRNGSLHISQTWS 451

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------EDYEVEAGQSATFRCNAV 332
            D G YTC   +  G    S  L V++  H  + P       E   +    +  F  N+ 
Sbjct: 452 GDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPFDGNS- 510

Query: 333 SDPSLKLSIVWLRGSEP---IDFESEPR--------FVQSNDYSLTVTKSSELDSGQYTC 381
             P L+  +     + P   +    +P+         V +  Y   +   +++  GQ++ 
Sbjct: 511 --PLLRYVLEMSENNAPWTILLASVDPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSK 568

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
             +        + +L  + P   P N       + +  ++ W P       G  +GY ++
Sbjct: 569 DTE--------RVSLPEEPPTAPPQNVIASGRTN-QSIMIQWQPPPESHQNGILKGYIIR 619

Query: 442 TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
            W         +   +   +     ++  +  +     V A+N A  G  S  ++  T +
Sbjct: 620 -WCMPVVPVGYQFKNITDADVNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQ 678

Query: 502 GVP----GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK-IKYQSVKGTKVGPLLERL 556
           GVP    G V + EA    +  F      P+  NG+  GYK I ++  +  +V  +  R 
Sbjct: 679 GVPTVPPGNVHA-EATNSTTIRFTWNAPSPQFINGINQGYKLIAWEPEQEEEVTMVTAR- 736

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPN 616
           P   D +     ++GL+  T+Y   +  +T  GDG         P   P  V      P 
Sbjct: 737 PNFQD-SIHVGFVSGLKKFTEYFTSVLCFTTPGDG---------PRSAPQLVRTHEDVPG 786

Query: 617 NLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
            +               H +YRI W  +N
Sbjct: 787 PV--------------GHLRYRISWEEYN 801



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 143/588 (24%), Positives = 217/588 (36%), Gaps = 95/588 (16%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEV 106
           V L C   G P P   W K G  I  S  +    +      SL+I     SD G+YTC  
Sbjct: 309 VVLACETSGAPRPAITWQK-GERILASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLA 367

Query: 107 SN--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--WVHN 162
           +N  GV EA   S DL V A    T  P+  +  +    +  C  S  P   +   W  +
Sbjct: 368 TNSRGVDEA---SADLVVWARTRITKPPQDQSVIKGTQASMVCGVSHDPRVTVRYIWEKD 424

Query: 163 GKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAP 219
           G  +     NPR ++  N  + I      D G Y C   ++ G   +  ++ V  L HAP
Sbjct: 425 GATLG-VESNPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAP 483

Query: 220 EITEAPKDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVA 278
           E   A     TV+ + + LT  + F    P + ++    E       +L + D K T V 
Sbjct: 484 EHPVATLS--TVERRAINLTWTKPFDGNSPLLRYVLEMSENNAPWTILLASVDPKATSVT 541

Query: 279 F-----ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS--ATFRCN- 330
                 A S ++   A N +G  Q S      + T     PE+      Q+  A+ R N 
Sbjct: 542 VKGLVPARSYQFRLCAVNDVGKGQFS------KDTERVSLPEEPPTAPPQNVIASGRTNQ 595

Query: 331 -----------AVSDPSLKLSIV-WLRGSEPIDFESEPRFVQSNDYS------LTVTKSS 372
                      +  +  LK  I+ W     P+ ++   + +   D +      L +  + 
Sbjct: 596 SIMIQWQPPPESHQNGILKGYIIRWCMPVVPVGYQF--KNITDADVNNLLLEDLIIWTNY 653

Query: 373 ELDSGQYTCRAQTELDFIEAQAT-LTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQS 430
           E++   Y       L    ++ T  T+Q VP   P N    +  ++     +WN  SPQ 
Sbjct: 654 EIEVAAYNSAG---LGVYSSKVTEWTLQGVPTVPPGNVH-AEATNSTTIRFTWNAPSPQF 709

Query: 431 LRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR----VLAFNGA 486
           + G  +GYK+  W E + E  +  +        +  V  FV   K F      VL F   
Sbjct: 710 INGINQGYKLIAW-EPEQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYFTSVLCFTTP 767

Query: 487 YNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKG 546
            +GP S      T E VPG        P+G   + + W +  + N  +  Y         
Sbjct: 768 GDGPRSAPQLVRTHEDVPG--------PVGHLRYRISWEEYNRTNTRVTHY--------- 810

Query: 547 TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
                    LP +    T   ++ GL   T Y I +A  T  G G  S
Sbjct: 811 ---------LPNV----TLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 845



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N  ++    A +  V+W P    S  G  +GYK+  W  + G  + R   +  
Sbjct: 1487 VPTAAPRNV-VVHGATATQLDVTWEPPPLDSHNGDIQGYKIYFWEAQRGNLTERVKTLFL 1545

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E++  ++      +     V AFN A +GP S      T +  P    S++   L +++
Sbjct: 1546 AENSV-KLKNLTGYTAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSAPSSVKFSELTTTS 1604

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNG+L GY++ Y+
Sbjct: 1605 VNVSWEAPQFPNGILEGYRLVYE 1627



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 125/307 (40%), Gaps = 43/307 (14%)

Query: 414  IDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDK 469
            + A+  ++SW P    +SP       R Y +QT     G  ++    V+   S+   VD+
Sbjct: 1278 VRARSVLLSWEPGSDGLSP------VRYYTIQTRELPSGRWTLHSASVSHNASSFI-VDR 1330

Query: 470  FVPASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKW 524
              P +    RV A N   +   SE    +T     P+  P     L   P  +++  ++W
Sbjct: 1331 LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTI---LSVTPHTTTSVLIRW 1387

Query: 525  VKP--EQPNGVLMGYKIKYQSV--KGTKVGPL---------------LERLPYISDPTTT 565
              P  ++ NG+L+G++I+Y+ +  +G +   L               +  +  +S P+ T
Sbjct: 1388 QPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELTSMYSMRNLSRPSLT 1447

Query: 566  SAKLAGLEPSTKYRIHLAGYTKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVI 620
              +L  L    +Y I ++ Y   G+G  S  + +F    VP   P NV   G+T   L +
Sbjct: 1448 QYELDNLNKHRRYEIRMSVYNAVGEGPSSTPQEVFVGEAVPTAAPRNVVVHGATATQLDV 1507

Query: 621  SWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQ 680
            +W   P   HN     Y+I++     G    +   L   ++ + L N   +  Y + V  
Sbjct: 1508 TWEPPPLDSHNGDIQGYKIYFWEAQRGNLTERVKTLFLAENSVKLKNLTGYTAYMVSVAA 1567

Query: 681  TWTEKDG 687
                 DG
Sbjct: 1568 FNAAGDG 1574



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 9/198 (4%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ V      G   GYKV  + EKD +   R  +V  
Sbjct: 1063 VPSSGPTNVSALATTSSS-MLVRWSEVPEADRNGLVLGYKV-IYKEKDSDAQPRFWLVEG 1120

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1121 NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 1180

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P + Y
Sbjct: 1181 SVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVL----APSARQYTATGLKPESVY 1236

Query: 579  RIHLAGYTKA--GDGAES 594
               +   T+   GD AE+
Sbjct: 1237 LFRITAQTRKGWGDAAEA 1254



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 128/308 (41%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 823  LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGPPTNLGISN---------- 868

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +   G + E    L++    N+ ++ + EV    P
Sbjct: 869  IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNP 928

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 929  FTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTA---SETSLWLRWMPL 985

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY    G   G  L  +  + D       +  LE  T+YR+ + 
Sbjct: 986  PEMEYNGNPESVGYKIKYSRSDGH--GKTLSHV--VQDRVEREYTIEDLEEWTEYRVQVQ 1041

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S+ +       VP   P NV    +T +++++ W+ +PE + N     Y+
Sbjct: 1042 AFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYK 1101

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1102 VIYKEKDS 1109


>gi|326679087|ref|XP_001921978.2| PREDICTED: neurofascin-like [Danio rerio]
          Length = 1150

 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 187/757 (24%), Positives = 318/757 (42%), Gaps = 91/757 (12%)

Query: 15  ILLNVIATGISASQNRHAPK--QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGV 72
           ++L V+   ++A     APK  +   T    +A+  +++ L C   G P P   W+KD  
Sbjct: 217 LILQVLTARMAAHT---APKFLKPKGTASTRIAMLGEELILECFAAGVPTPSIKWTKDYE 273

Query: 73  PINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP 132
            +  + +  + N+ K+L IK +   D G Y C  SN +G +  + I + V + P++  +P
Sbjct: 274 EMTMTGKKLE-NFNKTLRIKKIAMDDGGDYICTASNRMG-SLDHIITVRVKSVPFWLEKP 331

Query: 133 EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDT 192
           E +  + ++  +  C+A G+P P+I W+ NG+PIS AP +P R+V  + +T   +     
Sbjct: 332 ESLVLSRDDGGSMVCRADGIPRPQIQWLVNGEPISDAPRSPGRQVSGDTLTFRGVVPDSA 391

Query: 193 GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEV 250
             + CNA+N  GY+  + ++ V+   P +   P+DE   T +G   +L C  FG+PKP +
Sbjct: 392 AVFQCNASNPYGYIMTNAFLAVMDMKPRLL-GPRDELFKTTEGNLTLLDCPYFGSPKPVL 450

Query: 251 NWIHNQ-KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH 309
            W       L GGRY  L  G L+I +    D G Y C A N +G  +    L VKE   
Sbjct: 451 RWSKGGVGTLEGGRYRTLPNGTLEIRNTKLQDQGAYVCVASNVIGRDEKEVQLEVKEPIK 510

Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
           I   P +  V  G  A F C    D SL +++ WL+  +   F    R +  ++ SL++ 
Sbjct: 511 IIRAPHNTVVIRGSLARFDCKIKFDTSLDVTVTWLKDKK---FLILGRRMTKDEESLSIA 567

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVID--AKKAVVSWNPVS 427
                D G YTCR ++EL+ +   A LTV   ++ P   T +++ D   +   ++W P  
Sbjct: 568 DVYRRDEGVYTCRVKSELEEVTTSAKLTV---MDRPDPPTDLEISDPSERSVRLTWTP-- 622

Query: 428 PQSLRGH--FRGYKVQ--------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 477
              L  H   + Y +Q         W    G  +    + +   S  + + +  P  +  
Sbjct: 623 --GLSNHSPIKEYLIQYTENLLADYWLLPSGWKN----LTSYPGSLNSVILQLTPFVEYT 676

Query: 478 ARVLAFNGAYNGPPSEIISF-----VTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQP 530
            RV+A NG     PS    +       P+ +P  +Q L    +  +   + W  ++  + 
Sbjct: 677 FRVIAVNGIGPSKPSWASEYYQTGGAVPDAIPRNIQGL-GYGVFRNNMEISWEPLEYREW 735

Query: 531 NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGD 590
           NG  +GY + ++           E     +     S  +   +  T Y I +      G 
Sbjct: 736 NGPKLGYMVWWRRRDSR------EEWKNYTTYWWCSTIIYDTDTFTPYEIKVQAINFFGY 789

Query: 591 GAESKYLFYV-----PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
           G ES  +        P   P  +         L + W  +   +      +Y++++ R +
Sbjct: 790 GPESPVVIGYSGEDRPVAAPSELSVSDIESTTLTVHWEPVARADIMGEIKEYKVYYWRES 849

Query: 646 TGEAWNQDDVLDWR-QSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTT 704
           +   W+   V+  R +++   AN P                   G++  L          
Sbjct: 850 SRLPWH---VVTRRIKTKSFKANGPRLS----------------GTLTGL---------- 880

Query: 705 EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                VP S     ++  N  Y GPPS  I F TPEG
Sbjct: 881 -----VPFSNYKMYIVVANNRYEGPPSHNIEFQTPEG 912



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 91/198 (45%), Gaps = 13/198 (6%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE--GSIRELIVN 458
           P+ APS  + +  I++    V W PV+   + G  + YKV  W E        +   I  
Sbjct: 805 PVAAPSELS-VSDIESTTLTVHWEPVARADIMGEIKEYKVYYWRESSRLPWHVVTRRIKT 863

Query: 459 K-----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAI 513
           K     G   +  +   VP S     ++  N  Y GPPS  I F TPEGVP   +S   +
Sbjct: 864 KSFKANGPRLSGTLTGLVPFSNYKMYIVVANNRYEGPPSHNIEFQTPEGVPTIPRSFRIM 923

Query: 514 PLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLE 573
                  YL W +P +PNGVL GY +KYQS+    VG  +E +P    P  T   L  L+
Sbjct: 924 HRHYDTLYLDWEEPAEPNGVLTGYILKYQSLN-VSVGIQVENIP----PNITYFSLRRLD 978

Query: 574 PSTKYRIHLAGYTKAGDG 591
             T+Y+  LA  T+ G G
Sbjct: 979 RYTRYKFSLAAQTEVGVG 996



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 89/369 (24%), Positives = 148/369 (40%), Gaps = 31/369 (8%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSD--RISQGNYGKSLIIKHVEFSD--QGSYTCEVSNGV 110
           C   G P P   W+++GV +N +   ++S      +L I      D  +G Y C  +N  
Sbjct: 53  CEATGNPPPVFTWTRNGVYLNVARDPQVSMRWRSGTLEIFFWGRPDDYEGIYQCTATNEF 112

Query: 111 GEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECK-ASGLPEPEIHWVHNGKPISQ 168
           G A S  I+L V  A  +  E  E +       +   C    G P+P+ +W+++    + 
Sbjct: 113 GTALSSYINLRVSKARTWLKEYLEPVTVVVGLPLILPCNPPEGPPKPDTYWLNS----TM 168

Query: 169 APPNPRRKVGPNR---ITIENLRKSDT-GNYGCNA----TNSLG----YVYKDVYVNVLA 216
           +P    R+V  +    +   ++   D   NY C A    TN++      + + +   + A
Sbjct: 169 SPIRQDRRVSKSENGDLYFSSIVADDALTNYVCVARFPFTNTIQQKPPLILQVLTARMAA 228

Query: 217 HAPEITEAPK----DEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGD 271
           H       PK        + G+ ++L C   G P P + W  + +E+T  G+        
Sbjct: 229 HTAPKFLKPKGTASTRIAMLGEELILECFAAGVPTPSIKWTKDYEEMTMTGKKLENFNKT 288

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
           L+I  +A  D G+Y C A N++G+     ++ VK      ++PE   +      +  C A
Sbjct: 289 LRIKKIAMDDGGDYICTASNRMGSLDHIITVRVKSVPFWLEKPESLVLSRDDGGSMVCRA 348

Query: 332 VSDPSLKLSIVWLRGSEPI-DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
              P  +  I WL   EPI D    P    S D +LT        +  + C A     +I
Sbjct: 349 DGIP--RPQIQWLVNGEPISDAPRSPGRQVSGD-TLTFRGVVPDSAAVFQCNASNPYGYI 405

Query: 391 EAQATLTVQ 399
              A L V 
Sbjct: 406 MTNAFLAVM 414



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 115/294 (39%), Gaps = 32/294 (10%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENL---RKSD-TGNYGCN 198
           +  EC+A+G P P   W  NG  ++ A  +P+  +     T+E     R  D  G Y C 
Sbjct: 49  IIVECEATGNPPPVFTWTRNGVYLNVA-RDPQVSMRWRSGTLEIFFWGRPDDYEGIYQCT 107

Query: 199 ATNSLGYVYKDVYVNVLAHAPE--ITEAPKDEYTVDGKTVVLTCR-VFGAPKPEVNWIHN 255
           ATN  G      Y+N+        + E  +    V G  ++L C    G PKP+  W+++
Sbjct: 108 ATNEFGTALSS-YINLRVSKARTWLKEYLEPVTVVVGLPLILPCNPPEGPPKPDTYWLNS 166

Query: 256 QKE--LTGGRYTILETGDLKITDVAFADS-GEYTCFARNKL-GTAQGS-----GSLTVKE 306
                    R +  E GDL  + +   D+   Y C AR     T Q         LT + 
Sbjct: 167 TMSPIRQDRRVSKSENGDLYFSSIVADDALTNYVCVARFPFTNTIQQKPPLILQVLTARM 226

Query: 307 HTHITDQ-------PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFV 359
             H   +               G+     C A   P+   SI W +  E +    +   +
Sbjct: 227 AAHTAPKFLKPKGTASTRIAMLGEELILECFAAGVPT--PSIKWTKDYEEMTMTGKK--L 282

Query: 360 QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-VP--LEAPSNFTL 410
           ++ + +L + K +  D G Y C A   +  ++   T+ V+ VP  LE P +  L
Sbjct: 283 ENFNKTLRIKKIAMDDGGDYICTASNRMGSLDHIITVRVKSVPFWLEKPESLVL 336


>gi|432953128|ref|XP_004085301.1| PREDICTED: neurofascin-like, partial [Oryzias latipes]
          Length = 1072

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 186/711 (26%), Positives = 292/711 (41%), Gaps = 61/711 (8%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQG 100
           ++ L+ +++ L CI  G P P   W+KDG  + + PS +I   N+ K + I    F D G
Sbjct: 243 KLVLQGEELLLECIAAGVPTPHIAWTKDGDELAVTPSMKIK--NFNKMIQIPKAAFEDAG 300

Query: 101 SYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV 160
            YTC  +N +G  + ++I + V AAP++  +P  +  A EET    C++ G+P P I W 
Sbjct: 301 EYTCSATNKIGYIE-HTISVIVKAAPFWVEKPTNLILAPEETGRLVCRSDGVPRPTISWF 359

Query: 161 HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
            NG PI  A     R V  + IT+ ++   +T  Y CNA+N  GY+  + +VNVL   P 
Sbjct: 360 MNGDPIEDAMQQSNRLVAGDTITLRSVTAENTAVYQCNASNQYGYLLANAFVNVLHSTPR 419

Query: 221 ITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWI-HNQKELTGGRYTILETGDLKITDV 277
           I   P++E    ++G    L CR FG+P P++ W  + Q  L G R+     G L++  +
Sbjct: 420 II-GPRNEVVKVIEGSRTFLDCRFFGSPVPDLRWSKYGQGNLEGTRFKTHSNGTLEVKRI 478

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
              D G Y C   N  G  +    + VKE   I  +P+  +V  G      C   +D + 
Sbjct: 479 QLQDEGTYVCVISNIAGRDENQVRVEVKEPIVIVTKPQSMKVIRGSDVRLECAVKADATT 538

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
             +  W++  + + F       +SN   L +T  +  D G YTC  + ELD   A A L 
Sbjct: 539 PFTTSWIKNKKQVTFGWRVSLDESN---LVITDVNRGDEGNYTCVFKNELDQKSASAHLL 595

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIV 457
           V      P+N  L    + +   +SW P    S       Y VQ   +    G  R L  
Sbjct: 596 VMDRPNPPTNLELSDPFE-RSVRLSWVP--GDSNHSPITDYLVQYDDDDWLPGKWRNLST 652

Query: 458 NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV--QSLEAIPL 515
             G   +  +    P +    RV+A N      PS   +     G P  V  ++++ +  
Sbjct: 653 YPGNLNSV-ILHLTPFTYYEFRVIAINAIGASRPSRSSARFQTSGAPPDVIPKNVKGVGT 711

Query: 516 GSSAFYLKW--VKPEQPNGVLMGYKIKYQ---SVKGTKVGPLLERLPYISDPTTTSAKLA 570
             +   + W  +   + NG  + Y + ++   S +  K         YI D  T      
Sbjct: 712 WRNNMEISWEPLTYREWNGPHLKYLVWWRRRDSREEWKNATTKWLRYYIYDADTF----- 766

Query: 571 GLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEH 630
                T Y I +      G G ES  +  + +   D      + P NL IS     +IE 
Sbjct: 767 -----TPYEIKVQAVNDFGLGPESPVV--IGYSGEDRPL---AAPLNLRIS-----DIES 811

Query: 631 NAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGS 690
                 +    R +  GE   +  V  WR S               ++   W  +   G 
Sbjct: 812 TQVTVHWDPVSRENIMGEL-KEYKVYYWRDSS--------------QLRWLWVNR---GM 853

Query: 691 IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
             ++  N     +  +   +P S     ++  N  + GPPS  I F TPEG
Sbjct: 854 KSKIFPNNDPEPSGVITDLIPYSNYKMYIVVANSRFEGPPSNNIHFSTPEG 904



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 163/654 (24%), Positives = 255/654 (38%), Gaps = 66/654 (10%)

Query: 58  GGTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSDQ-GSYTCEV----SNGVG 111
            G P P+T W    + P+    R+S G  G  L   +V F+D    Y C       N + 
Sbjct: 153 AGPPKPETYWMSSSMQPVRQDRRVSMGING-DLYFSNVLFNDSVVDYCCNARFPHKNAIQ 211

Query: 112 E-----AKSYSIDLSVLAAPYFTVEPEFINAA----EEETVTFECKASGLPEPEIHWVHN 162
           +      K  S      AAP + + P+  +++    + E +  EC A+G+P P I W  +
Sbjct: 212 QKTPVVVKVLSTRSIAEAAPTW-LSPKGSSSSKLVLQGEELLLECIAAGVPTPHIAWTKD 270

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           G  ++   P+ + K     I I      D G Y C+ATN +GY+   + V V A AP   
Sbjct: 271 GDELA-VTPSMKIKNFNKMIQIPKAAFEDAGEYTCSATNKIGYIEHTISVIVKA-APFWV 328

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--RYTILETGD-LKITDVAF 279
           E P +      +T  L CR  G P+P ++W  N   +     +   L  GD + +  V  
Sbjct: 329 EKPTNLILAPEETGRLVCRSDGVPRPTISWFMNGDPIEDAMQQSNRLVAGDTITLRSVTA 388

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSL 337
            ++  Y C A N+ G    +  + V   T   I  + E  +V  G      C     P  
Sbjct: 389 ENTAVYQCNASNQYGYLLANAFVNVLHSTPRIIGPRNEVVKVIEGSRTFLDCRFFGSPVP 448

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
            L   W +  +  + E   RF   ++ +L V +    D G Y C         E Q  + 
Sbjct: 449 DLR--WSKYGQG-NLEGT-RFKTHSNGTLEVKRIQLQDEGTYVCVISNIAGRDENQVRVE 504

Query: 398 VQVPL---EAPSNFTLIQVIDAK-KAVVSWNPVSPQSLRGHFRGYKVQT--WTEKDGEGS 451
           V+ P+     P +  +I+  D + +  V  +  +P +     +  K  T  W     E +
Sbjct: 505 VKEPIVIVTKPQSMKVIRGSDVRLECAVKADATTPFTT-SWIKNKKQVTFGWRVSLDESN 563

Query: 452 IRELIVNKG-ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSL 510
           +    VN+G E   T V K     K+ +  L      N P                  +L
Sbjct: 564 LVITDVNRGDEGNYTCVFKNELDQKSASAHLLVMDRPNPP-----------------TNL 606

Query: 511 EAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
           E       +  L WV  +  +  +  Y ++Y        G       Y   P   ++ + 
Sbjct: 607 ELSDPFERSVRLSWVPGDSNHSPITDYLVQYDDDDWLP-GKWRNLSTY---PGNLNSVIL 662

Query: 571 GLEPSTKYRIHLAGYTKAGDG--AESKYLFYVPFKNPD----NVEGRGSTPNNLVISWTA 624
            L P T Y   +      G    + S   F      PD    NV+G G+  NN+ ISW  
Sbjct: 663 HLTPFTYYEFRVIAINAIGASRPSRSSARFQTSGAPPDVIPKNVKGVGTWRNNMEISWEP 722

Query: 625 MPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           +   E N PH KY ++WRR ++ E W ++    W +  +  A+  TF PYEIKV
Sbjct: 723 LTYREWNGPHLKYLVWWRRRDSREEW-KNATTKWLRYYIYDAD--TFTPYEIKV 773



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 19/202 (9%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           PL AP N   I  I++ +  V W+PVS +++ G  + YKV  W +      +R L VN+G
Sbjct: 797 PLAAPLNLR-ISDIESTQVTVHWDPVSRENIMGELKEYKVYYWRDS---SQLRWLWVNRG 852

Query: 461 EST----------TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSL 510
             +          +  +   +P S     ++  N  + GPPS  I F TPEGVP    S 
Sbjct: 853 MKSKIFPNNDPEPSGVITDLIPYSNYKMYIVVANSRFEGPPSNNIHFSTPEGVPSAPTSF 912

Query: 511 EAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPL-LERLPYISDPTTTSAKL 569
                   + Y+ W  P +PNG++ GY +KY ++  T+   + +E  P    P  TS  +
Sbjct: 913 RIQQRHLDSIYVDWDLPAEPNGIITGYSLKYHTLNATRGEEMRVEEFP----PNVTSFSI 968

Query: 570 AGLEPSTKYRIHLAGYTKAGDG 591
              +  T+Y   +A  T+ G G
Sbjct: 969 RRYDRYTRYWFSVAARTRIGIG 990



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 124/296 (41%), Gaps = 29/296 (9%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPNP---RRKVGPNRITIENLRKSDTGNYG 196
           ++T+  EC+A G P P   W  +GK  + A  +    RR+ G   I   N  +     Y 
Sbjct: 45  KDTMVIECEAIGNPHPTFSWRRDGKYFNVARDSQVSMRRRSGTLEIYARNNPEKYEAVYQ 104

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEI-TEAPKDEYTVD-GKTVVLTCRV-FGAPKPEVNWI 253
           C A+N  G  Y    +N+  + P +    P +   +  G  +VL C    G PKPE  W+
Sbjct: 105 CIASNQYGSAYTH-KINLQMYRPPVWPREPLEPVVISAGLPLVLPCESPAGPPKPETYWM 163

Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADS-GEYTCFAR--NKLGTAQGS-------GS 301
            +  Q      R ++   GDL  ++V F DS  +Y C AR  +K    Q +        +
Sbjct: 164 SSSMQPVRQDRRVSMGINGDLYFSNVLFNDSVVDYCCNARFPHKNAIQQKTPVVVKVLST 223

Query: 302 LTVKEHTHITDQPEDYE----VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
            ++ E       P+       V  G+     C A   P+    I W +  + +      +
Sbjct: 224 RSIAEAAPTWLSPKGSSSSKLVLQGEELLLECIAAGVPTPH--IAWTKDGDELAVTPSMK 281

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
               N   + + K++  D+G+YTC A  ++ +IE   ++ V+     +E P+N  L
Sbjct: 282 IKNFNKM-IQIPKAAFEDAGEYTCSATNKIGYIEHTISVIVKAAPFWVEKPTNLIL 336


>gi|326928941|ref|XP_003210631.1| PREDICTED: protein sidekick-1-like, partial [Meleagris gallopavo]
          Length = 2091

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 180/622 (28%), Positives = 279/622 (44%), Gaps = 42/622 (6%)

Query: 44  VALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFSDQ 99
           V   + +V L C+    P+ +   +W ++G+      +I+ G  ++G+ L I +   +D 
Sbjct: 239 VVAGSSEVTLECVASARPVERLSIMWKRNGI------KITSGISSFGRRLTITNPTSADV 292

Query: 100 GSYTCE--VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAE-EETVTFECKASGLPEPE 156
           G Y CE  + +   E       +S++  PYFTVEPE +  AE E+ V   C+A G+P P 
Sbjct: 293 GMYFCEAKLRDSTEEPARAKAFISLMEPPYFTVEPESVILAEVEKDVDILCQAMGVPIPS 352

Query: 157 IHWVHNGKPISQAPPNPRRKVG-PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVL 215
           + W  +  P+S+   NPR KV     + I  LR  D G + C A+N  G +    Y++V 
Sbjct: 353 LVWYKDSIPLSKLQ-NPRYKVLLSGGLRIHALRPQDAGIFQCFASNKAGEIQTYTYLDVT 411

Query: 216 AHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETG 270
              P   + P+D    +G T +LTC V GAPKP ++W    + L  G     R+ +LE+G
Sbjct: 412 NIKPAFIQPPEDTTVTEGMTAMLTCEVSGAPKPAISWKKGNQILASGSVQIPRFILLESG 471

Query: 271 DLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN 330
            L+IT V   D+G YTC A N  G       LTV   T I   PE+  V  G +AT RC 
Sbjct: 472 GLQITPVFLQDAGNYTCHAVNSEGALNAFVMLTVWNRTFIVHPPENSTVIKGTTATLRCE 531

Query: 331 AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
           A  DP + +  VW + S  I+  S  R     D +L ++++   D G YTC   +     
Sbjct: 532 ATHDPRISIRYVWKKDSVVINPSSSSRITVEKDGTLLISQTWSGDIGDYTCEVISFGGND 591

Query: 391 EAQATLTVQVPLEAPSNFTLIQVID---AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
              A L V     +P N  L+ +++   ++  V+SW  V P         Y V+  +E +
Sbjct: 592 SRMARLEVIELPHSPQN--LLAILNSSYSRSVVLSW--VRPFDGNSPVLYYMVEV-SENN 646

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFVTPEGVPGT 506
               +  L     + T+  V    PA     RV A N    G   SE    + PE  P  
Sbjct: 647 SPWKVH-LSNLDPKMTSVTVSGLTPARTYQFRVCAVNQVGKGQYSSETSRLMLPEEPPSA 705

Query: 507 -VQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
             +++ A    + +  ++W  P   + NGVL GY ++Y+ + G    P   +   I+   
Sbjct: 706 PPKNIVASGRTNQSIMVQWQPPPESEHNGVLHGYILRYR-LAGL---PGEYQYKNITSAE 761

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNL 618
                +  L   T+Y I +A Y  AG GA S+      L  VP   P NV+        +
Sbjct: 762 INYCLVTDLIIWTQYEIQVASYNGAGLGAFSRPVTEYTLQGVPTAPPQNVQVEAVNSTTI 821

Query: 619 VISWTAMPEIEHNAPHFKYRIF 640
              W+  P+   N  +  Y++ 
Sbjct: 822 QFLWSPPPQQFINGINQGYKLL 843



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 181/691 (26%), Positives = 261/691 (37%), Gaps = 95/691 (13%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +KK V      V  F      P PQ  W +DG  I PS RI+       L+I      D 
Sbjct: 133 QKKTVTEGEAAVLNFMHIFSYPRPQVTWFRDGHKIIPSSRIAI-TLENQLVILATSVVDA 191

Query: 100 GSYTCEVSN-GVGEAKSY---------SIDLSVLAAPYFTVEPEFINA-AEEETVTFECK 148
           G Y  +  N   GE K+          ++D S   AP   + P+  +  A    VT EC 
Sbjct: 192 GDYYVQAVNEKNGENKTSPLIHLSVASAMDPSDTTAPIIVIPPQNTSVVAGSSEVTLECV 251

Query: 149 ASGLP--EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT--NSLG 204
           AS  P     I W  NG  I+    +  R     R+TI N   +D G Y C A   +S  
Sbjct: 252 ASARPVERLSIMWKRNGIKITSGISSFGR-----RLTITNPTSADVGMYFCEAKLRDSTE 306

Query: 205 YVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KELT 260
              +      L   P  T  P+     +  K V + C+  G P P + W  +     +L 
Sbjct: 307 EPARAKAFISLMEPPYFTVEPESVILAEVEKDVDILCQAMGVPIPSLVWYKDSIPLSKLQ 366

Query: 261 GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHITDQPEDYEV 319
             RY +L +G L+I  +   D+G + CFA NK G  Q    L V          PED  V
Sbjct: 367 NPRYKVLLSGGLRIHALRPQDAGIFQCFASNKAGEIQTYTYLDVTNIKPAFIQPPEDTTV 426

Query: 320 EAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSG 377
             G +A   C     P  K +I W +G++ +   S   PRF+      L +T     D+G
Sbjct: 427 TEGMTAMLTCEVSGAP--KPAISWKKGNQILASGSVQIPRFILLESGGLQITPVFLQDAG 484

Query: 378 QYTCRAQTELDFIEAQATLTV---QVPLEAPSNFTLIQVIDA------------------ 416
            YTC A      + A   LTV      +  P N T+I+   A                  
Sbjct: 485 NYTCHAVNSEGALNAFVMLTVWNRTFIVHPPENSTVIKGTTATLRCEATHDPRISIRYVW 544

Query: 417 KKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
           KK  V  NP S   +             EKDG   I +         T EV  F      
Sbjct: 545 KKDSVVINPSSSSRIT-----------VEKDGTLLISQTWSGDIGDYTCEVISFGGNDSR 593

Query: 477 FARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSS---AFYLKWVKPEQPNGV 533
            AR+            E+I        P + Q+L AI L SS   +  L WV+P   N  
Sbjct: 594 MARL------------EVIEL------PHSPQNLLAI-LNSSYSRSVVLSWVRPFDGNSP 634

Query: 534 LMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-- 591
           ++ Y ++  S   +     L  L    DP  TS  ++GL P+  Y+  +    + G G  
Sbjct: 635 VLYYMVEV-SENNSPWKVHLSNL----DPKMTSVTVSGLTPARTYQFRVCAVNQVGKGQY 689

Query: 592 -AESKYLFYV---PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTG 647
            +E+  L      P   P N+   G T  ++++ W   PE EHN     Y + +R     
Sbjct: 690 SSETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPESEHNGVLHGYILRYRLAGLP 749

Query: 648 EAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
             +   ++     +  ++ +   +  YEI+V
Sbjct: 750 GEYQYKNITSAEINYCLVTDLIIWTQYEIQV 780



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 118/301 (39%), Gaps = 28/301 (9%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           APYF  EP       E   +   C A G    E  W+HN   I+             +  
Sbjct: 38  APYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWLHNDSEITTYSSE-------YKYI 90

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLT-CRV 242
           I  L++SD G Y C   N +G + +      +A+     +  + +   +G+  VL    +
Sbjct: 91  IPALQRSDAGFYQCIVRNRMGALLQRRSEVQVAYMGNFMDTNQKKTVTEGEAAVLNFMHI 150

Query: 243 FGAPKPEVNWIHN-QKELTGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSG 300
           F  P+P+V W  +  K +   R  I     L I   +  D+G+Y   A N K G  + S 
Sbjct: 151 FSYPRPQVTWFRDGHKIIPSSRIAITLENQLVILATSVVDAGDYYVQAVNEKNGENKTSP 210

Query: 301 --SLTVKEHTHITDQ--------PEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEP 349
              L+V      +D         P++  V AG S  T  C A + P  +LSI+W R    
Sbjct: 211 LIHLSVASAMDPSDTTAPIIVIPPQNTSVVAGSSEVTLECVASARPVERLSIMWKRNGIK 270

Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFT 409
           I        + S    LT+T  +  D G Y C A+   D  E  A     + L  P  FT
Sbjct: 271 IT-----SGISSFGRRLTITNPTSADVGMYFCEAKLR-DSTEEPARAKAFISLMEPPYFT 324

Query: 410 L 410
           +
Sbjct: 325 V 325



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 89/382 (23%), Positives = 154/382 (40%), Gaps = 46/382 (12%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           ++ L   ++ L C+  G+      W  +   ++    I+  +     II  ++ SD G Y
Sbjct: 49  QIHLEGNRLVLTCLAEGS------WPLEFKWLHNDSEITTYSSEYKYIIPALQRSDAGFY 102

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGL--------PE 154
            C V N +G       ++ V    Y      F++  +++TVT E +A+ L        P 
Sbjct: 103 QCIVRNRMGALLQRRSEVQVA---YMG---NFMDTNQKKTVT-EGEAAVLNFMHIFSYPR 155

Query: 155 PEIHWVHNGKPISQAPPNPRRKVG-PNRITIENLRKSDTGNYGCNATNSLGYVYKD---V 210
           P++ W  +G  I    P+ R  +   N++ I      D G+Y   A N      K    +
Sbjct: 156 PQVTWFRDGHKII---PSSRIAITLENQLVILATSVVDAGDYYVQAVNEKNGENKTSPLI 212

Query: 211 YVNVLAH-------APEITEAPKDEYTVDGKT-VVLTCRVFGAP--KPEVNWIHNQKELT 260
           +++V +        AP I   P++   V G + V L C     P  +  + W  N  ++T
Sbjct: 213 HLSVASAMDPSDTTAPIIVIPPQNTSVVAGSSEVTLECVASARPVERLSIMWKRNGIKIT 272

Query: 261 GGRYTILETGDLKITDVAFADSGEYTCFARNKLGT---AQGSGSLTVKEHTHITDQPEDY 317
            G  +      L IT+   AD G Y C A+ +  T   A+    +++ E  + T +PE  
Sbjct: 273 SGISSFGR--RLTITNPTSADVGMYFCEAKLRDSTEEPARAKAFISLMEPPYFTVEPESV 330

Query: 318 EV-EAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
            + E  +     C A+  P    S+VW + S P+     PR+       L +      D+
Sbjct: 331 ILAEVEKDVDILCQAMGVP--IPSLVWYKDSIPLSKLQNPRYKVLLSGGLRIHALRPQDA 388

Query: 377 GQYTCRAQTELDFIEAQATLTV 398
           G + C A  +   I+    L V
Sbjct: 389 GIFQCFASNKAGEIQTYTYLDV 410



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 2/142 (1%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP N   +  + A +  ++W+P    S  G+ +GYK+  W E D +    ++ V   
Sbjct: 1621 PAMAPQNIQ-VNSLSASQLELTWDPPPADSQNGNIQGYKIYYW-ESDVQNDTEKVKVLFL 1678

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
              TT  +      ++    + AFN A +GP S   +  T +  P     L    + S+  
Sbjct: 1679 PETTVRLKNLTSHTRYLVCISAFNAAGDGPRSRPSAGRTHQAAPSAPSFLAFSEITSTTL 1738

Query: 521  YLKWVKPEQPNGVLMGYKIKYQ 542
             + W +P   NGVL GY++ Y+
Sbjct: 1739 NVSWGEPTAANGVLQGYRVVYE 1760



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 10/203 (4%)

Query: 397  TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIRE 454
            T+Q P +   +   ++        + W P+      G+    GY+++ W       ++ +
Sbjct: 1088 TLQAPPDVAPSSVSVRTASESSLQMRWVPLPDTQYNGNPESVGYRIKFWRVDLQPSALLK 1147

Query: 455  LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEAI 513
            +I ++ E   T ++     ++   ++ AFN    GP SE++   T E VP    +++ A 
Sbjct: 1148 VINDRLERECT-IEDLEEWTEYELQIQAFNAIGAGPWSEVVRGRTRESVPSAPPENVSAE 1206

Query: 514  PLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAG 571
             + S+   L W  V   + NG+++GYKI Y++ K     P   R   +    T S  L+G
Sbjct: 1207 AVSSTQILLTWSAVPESEQNGLILGYKILYKA-KDLDSEP---RSQTVRGNHTQSCLLSG 1262

Query: 572  LEPSTKYRIHLAGYTKAGDGAES 594
            L     Y I +  +T+ GDG  S
Sbjct: 1263 LRKYVLYEIRVLAFTRIGDGVPS 1285



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 111/283 (39%), Gaps = 45/283 (15%)

Query: 343  WLRGSEPIDFESEPRFVQS----NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
            W   S  I  E+    ++S      Y L V  ++++    ++          E +A  T+
Sbjct: 1444 WQTYSSSISHEATSCIIESLNPFTSYKLRVKATNDIGDSDFSA---------ETEAVTTL 1494

Query: 399  Q-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG------- 450
            Q VP E P +  L+        +V W P   +SL G   GY++  + E D +        
Sbjct: 1495 QDVPDEPPGSV-LVTPHTTSSVLVQWQPPKAESLNGLLLGYRIY-YRELDYDAGSATESK 1552

Query: 451  SIRELIVNKGESTTTEVDKFVPAS-----------KNFARVLAFNGAYN----GPPSEII 495
            ++R     + E T     K V +S           K + R      AYN     P S  +
Sbjct: 1553 AVRNPSALRAELTPQSSFKTVNSSSALTTYELTQLKKYKRYEVLMTAYNVIGESPTSTPV 1612

Query: 496  SFVTPEGVPGTV-QSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPL 552
                 E  P    Q+++   L +S   L W  P  +  NG + GYKI Y     + V   
Sbjct: 1613 EVFVGEAAPAMAPQNIQVNSLSASQLELTWDPPPADSQNGNIQGYKIYYWE---SDVQND 1669

Query: 553  LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK 595
             E++  +  P TT  +L  L   T+Y + ++ +  AGDG  S+
Sbjct: 1670 TEKVKVLFLPETT-VRLKNLTSHTRYLVCISAFNAAGDGPRSR 1711



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 101/244 (41%), Gaps = 21/244 (8%)

Query: 458  NKGESTTTEVDKFVPASKNFARVLAFNGAYNGP---PSEIISFVT--PEGVPGTVQSLEA 512
            N+ ++   EV    P +    R+   N     P   PS +I  +   P+  P +V    A
Sbjct: 1046 NEPDAQMLEVPNLTPYTHYRFRMRQVNVVGASPLSQPSRVIQTLQAPPDVAPSSVSVRTA 1105

Query: 513  IPLGSSAFYLKWVK-PE-QPNG--VLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
                 S+  ++WV  P+ Q NG    +GY+IK+  V   +   LL+    I+D       
Sbjct: 1106 ---SESSLQMRWVPLPDTQYNGNPESVGYRIKFWRVD-LQPSALLK---VINDRLERECT 1158

Query: 569  LAGLEPSTKYRIHLAGYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWT 623
            +  LE  T+Y + +  +   G G  S+ +       VP   P+NV     +   ++++W+
Sbjct: 1159 IEDLEEWTEYELQIQAFNAIGAGPWSEVVRGRTRESVPSAPPENVSAEAVSSTQILLTWS 1218

Query: 624  AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWT 683
            A+PE E N     Y+I ++  +         V        +L+    +  YEI+V+    
Sbjct: 1219 AVPESEQNGLILGYKILYKAKDLDSEPRSQTVRGNHTQSCLLSGLRKYVLYEIRVLAFTR 1278

Query: 684  EKDG 687
              DG
Sbjct: 1279 IGDG 1282



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 15/197 (7%)

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
           VP   P N   ++ +++      W+P   Q + G  +GYK+  W   D  G++  + +  
Sbjct: 803 VPTAPPQNVQ-VEAVNSTTIQFLWSPPPQQFINGINQGYKLLAW-PVDAPGTVTVVTIAP 860

Query: 460 G-----ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                     T + K+   +  +  VL F    +GP S      T E  PG V  L    
Sbjct: 861 DFHGVHSGCITNLKKY---TTYYTSVLCFTTPGDGPRSAPQLLRTLEDKPGAVGHLSFTE 917

Query: 515 LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
           +  ++  + W +P + NG++ GY++ ++ V G     L          TT   K+ GL  
Sbjct: 918 ILDTSLKVSWQEPVEKNGIITGYQLSWE-VYGRNESRLTRT----LTNTTLEYKITGLSS 972

Query: 575 STKYRIHLAGYTKAGDG 591
            T Y I +A  T  G G
Sbjct: 973 LTTYTIEVAAVTAKGSG 989



 Score = 46.2 bits (108), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 3/144 (2%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P N +  + + + + +++W+ V      G   GYK+  +  KD +   R   V  
Sbjct: 1195 VPSAPPENVS-AEAVSSTQILLTWSAVPESEQNGLILGYKI-LYKAKDLDSEPRSQTVRG 1252

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNG-PPSEIISFVTPEGVPGTVQSLEAIPLGSS 518
              + +  +           RVLAF    +G P S  +   T +  PG    L    +  +
Sbjct: 1253 NHTQSCLLSGLRKYVLYEIRVLAFTRIGDGVPSSPAVIERTKDDAPGPPVRLVFPEVRLT 1312

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQ 542
            +  + W  PE+PNG+++GY+I Y+
Sbjct: 1313 SVRIVWQPPEEPNGIILGYQIAYR 1336


>gi|45383896|ref|NP_989436.1| protein sidekick-1 precursor [Gallus gallus]
 gi|82242600|sp|Q8AV58.1|SDK1_CHICK RecName: Full=Protein sidekick-1; Flags: Precursor
 gi|23194254|gb|AAN15075.1| sidekick-1 [Gallus gallus]
          Length = 2169

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 180/626 (28%), Positives = 279/626 (44%), Gaps = 42/626 (6%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVE 95
           + K V +   +V L C+    P+ +   +W ++G+      +I+ G  ++G+ L I +  
Sbjct: 252 QNKSVVVGTSEVTLECVASARPVERLSIMWKRNGI------KITSGISSFGRRLTITNPT 305

Query: 96  FSDQGSYTCE--VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAE-EETVTFECKASGL 152
            +D G Y CE  + +   E       +S++  PYFT EPE +  AE E+ V   C+A G+
Sbjct: 306 SADVGMYFCEAKLRDSTEEPARAKAFISLMVPPYFTAEPEGVILAEVEKDVDILCQAMGV 365

Query: 153 PEPEIHWVHNGKPISQAPPNPRRKVG-PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY 211
           P P + W  +  P+S+   NPR KV     + I  LR  D G + C A+N  G +    Y
Sbjct: 366 PIPSLVWYKDSVPLSKLQ-NPRYKVLLSGGLRIHALRPQDAGIFQCFASNKAGEIQTYTY 424

Query: 212 VNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTI 266
           ++V    P   + P+D    +G T +LTC V GAPKP ++W    + L  G     R+ +
Sbjct: 425 LDVTNIKPAFIQPPEDTTVTEGMTAMLTCEVSGAPKPAISWKKGNQILASGSVQIPRFVL 484

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
           LE+G L+IT V   D+G YTC A N  G       LTV   T I   PE+  V  G +AT
Sbjct: 485 LESGGLQITPVFLQDAGNYTCHAVNSEGALNAFVMLTVWNRTFIVHPPENSTVIKGTTAT 544

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
            RC A  DP + +  VW + S  I+  S  R     D +L ++++   D G YTC   + 
Sbjct: 545 LRCEATHDPRISIRYVWKKDSVVINPSSSSRITVEKDGTLLISQTWSGDIGDYTCEVISF 604

Query: 387 LDFIEAQATLTVQVPLEAPSNFTLIQVID---AKKAVVSWNPVSPQSLRGHFRGYKVQTW 443
                  A L V     +P N  L+  ++   ++  V+SW  V P         Y V+  
Sbjct: 605 GGNDSRMARLEVIELPHSPQN--LLATLNSSYSRSVVLSW--VRPFDGNSPVLYYMVEL- 659

Query: 444 TEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFVTPEG 502
           +E +    +  L     + T+  V    PA     RV A N    G   SE    + PE 
Sbjct: 660 SENNSPWKV-HLSNLDPKMTSVTVSGLTPARTYQFRVCAVNQVGKGQYSSETSRLMLPEE 718

Query: 503 VPGT-VQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
            P    +++ A    + +  ++W  P   + NGVL GY ++Y+ + G    P   +   I
Sbjct: 719 PPSAPPKNIVASGRTNQSIMVQWQPPPESEHNGVLHGYILRYR-LAGL---PGEYQYKNI 774

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGST 614
           +        +  L   T+Y I +A Y  AG GA S+      L  VP   P NV+     
Sbjct: 775 TSAEINYCLVTDLIIWTQYEIQVASYNGAGLGAFSRPVTEYTLQGVPTAPPQNVQVEAVN 834

Query: 615 PNNLVISWTAMPEIEHNAPHFKYRIF 640
              +   W+  P+   N  +  Y++ 
Sbjct: 835 STTIQFLWSPPPQQFINGINQGYKLL 860



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 178/693 (25%), Positives = 265/693 (38%), Gaps = 99/693 (14%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +KK V      V  F      P PQ  W +DG  I PS RI+       L+I     +D 
Sbjct: 150 QKKTVTEGEAAVLNFMHIFSYPRPQVTWFRDGHKIIPSSRIAI-TLENQLVILATSVADA 208

Query: 100 GSYTCEVSN-GVGEAK-SYSIDLSVLAA--------PYFTVEPE----FINAAEEETVTF 145
           G Y  +  N   GE K S  I LS+ +A        P   + P+     +  +E   VT 
Sbjct: 209 GGYYAQAVNEKNGENKTSPLIHLSIASATDPSDPTAPIIVIPPQNKSVVVGTSE---VTL 265

Query: 146 ECKASGLP--EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT--- 200
           EC AS  P     I W  NG  I+    +  R     R+TI N   +D G Y C A    
Sbjct: 266 ECVASARPVERLSIMWKRNGIKITSGISSFGR-----RLTITNPTSADVGMYFCEAKLRD 320

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ--- 256
           ++        +++++   P  T  P+     +  K V + C+  G P P + W  +    
Sbjct: 321 STEEPARAKAFISLMV-PPYFTAEPEGVILAEVEKDVDILCQAMGVPIPSLVWYKDSVPL 379

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHITDQPE 315
            +L   RY +L +G L+I  +   D+G + CFA NK G  Q    L V          PE
Sbjct: 380 SKLQNPRYKVLLSGGLRIHALRPQDAGIFQCFASNKAGEIQTYTYLDVTNIKPAFIQPPE 439

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSE 373
           D  V  G +A   C     P  K +I W +G++ +   S   PRFV      L +T    
Sbjct: 440 DTTVTEGMTAMLTCEVSGAP--KPAISWKKGNQILASGSVQIPRFVLLESGGLQITPVFL 497

Query: 374 LDSGQYTCRAQTELDFIEAQATLTV---QVPLEAPSNFTLIQVIDA-------------- 416
            D+G YTC A      + A   LTV      +  P N T+I+   A              
Sbjct: 498 QDAGNYTCHAVNSEGALNAFVMLTVWNRTFIVHPPENSTVIKGTTATLRCEATHDPRISI 557

Query: 417 ----KKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
               KK  V  NP S   +             EKDG   I +         T EV  F  
Sbjct: 558 RYVWKKDSVVINPSSSSRIT-----------VEKDGTLLISQTWSGDIGDYTCEVISFGG 606

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPN 531
                AR+            E+I    +P+ +  T+ S       S +  L WV+P   N
Sbjct: 607 NDSRMARL------------EVIELPHSPQNLLATLNSSY-----SRSVVLSWVRPFDGN 649

Query: 532 GVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             ++ Y ++  S   +     L  L    DP  TS  ++GL P+  Y+  +    + G G
Sbjct: 650 SPVLYYMVEL-SENNSPWKVHLSNL----DPKMTSVTVSGLTPARTYQFRVCAVNQVGKG 704

Query: 592 ---AESKYLFYV---PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
              +E+  L      P   P N+   G T  ++++ W   PE EHN     Y + +R   
Sbjct: 705 QYSSETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPESEHNGVLHGYILRYRLAG 764

Query: 646 TGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
               +   ++     +  ++ +   +  YEI+V
Sbjct: 765 LPGEYQYKNITSAEINYCLVTDLIIWTQYEIQV 797



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 113/300 (37%), Gaps = 28/300 (9%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           APYF  EP       E   +   C A G    E  W+HN   I+             +  
Sbjct: 55  APYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWLHNDSEITTYSSE-------YKYI 107

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLT-CRV 242
           I  L++SD G Y C   N +G + +      +A+     +A + +   +G+  VL    +
Sbjct: 108 IPALQRSDAGFYQCIVRNRMGALLQRRSEVQVAYMGNFMDANQKKTVTEGEAAVLNFMHI 167

Query: 243 FGAPKPEVNWIHN-QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGS 301
           F  P+P+V W  +  K +   R  I     L I   + AD+G Y   A N+      +  
Sbjct: 168 FSYPRPQVTWFRDGHKIIPSSRIAITLENQLVILATSVADAGGYYAQAVNEKNGENKTSP 227

Query: 302 LTVKEHTHITD-----------QPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEP 349
           L        TD            P++  V  G S  T  C A + P  +LSI+W R    
Sbjct: 228 LIHLSIASATDPSDPTAPIIVIPPQNKSVVVGTSEVTLECVASARPVERLSIMWKRNGIK 287

Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFT 409
           I        + S    LT+T  +  D G Y C A+   D  E  A     + L  P  FT
Sbjct: 288 IT-----SGISSFGRRLTITNPTSADVGMYFCEAKLR-DSTEEPARAKAFISLMVPPYFT 341



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 87/382 (22%), Positives = 154/382 (40%), Gaps = 46/382 (12%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           ++ L   ++ L C+  G+      W  +   ++    I+  +     II  ++ SD G Y
Sbjct: 66  QIHLEGNRLVLTCLAEGS------WPLEFKWLHNDSEITTYSSEYKYIIPALQRSDAGFY 119

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGL--------PE 154
            C V N +G       ++ V           F++A +++TVT E +A+ L        P 
Sbjct: 120 QCIVRNRMGALLQRRSEVQV------AYMGNFMDANQKKTVT-EGEAAVLNFMHIFSYPR 172

Query: 155 PEIHWVHNGKPISQAPPNPRRKVG-PNRITIENLRKSDTGNYGCNATNSLGYVYKD---V 210
           P++ W  +G  I    P+ R  +   N++ I     +D G Y   A N      K    +
Sbjct: 173 PQVTWFRDGHKII---PSSRIAITLENQLVILATSVADAGGYYAQAVNEKNGENKTSPLI 229

Query: 211 YVNVLAH-------APEITEAPKDEYTVDGKT-VVLTCRVFGAP--KPEVNWIHNQKELT 260
           ++++ +        AP I   P+++  V G + V L C     P  +  + W  N  ++T
Sbjct: 230 HLSIASATDPSDPTAPIIVIPPQNKSVVVGTSEVTLECVASARPVERLSIMWKRNGIKIT 289

Query: 261 GGRYTILETGDLKITDVAFADSGEYTCFARNKLGT---AQGSGSLTVKEHTHITDQPEDY 317
            G  +      L IT+   AD G Y C A+ +  T   A+    +++    + T +PE  
Sbjct: 290 SGISSFGR--RLTITNPTSADVGMYFCEAKLRDSTEEPARAKAFISLMVPPYFTAEPEGV 347

Query: 318 EV-EAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
            + E  +     C A+  P    S+VW + S P+     PR+       L +      D+
Sbjct: 348 ILAEVEKDVDILCQAMGVP--IPSLVWYKDSVPLSKLQNPRYKVLLSGGLRIHALRPQDA 405

Query: 377 GQYTCRAQTELDFIEAQATLTV 398
           G + C A  +   I+    L V
Sbjct: 406 GIFQCFASNKAGEIQTYTYLDV 427



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 2/142 (1%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP N   +  + A +  ++W+P    S  G+ +GYK+  W E D +    ++ V   
Sbjct: 1653 PAMAPQNIQ-VNSLSASQLELTWDPPPADSQNGNIQGYKIYYW-EGDVQNDTEKVKVFSS 1710

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
                +        ++    + AFN A +GP S   +  T +  P     L    + S+  
Sbjct: 1711 LRQLSASKNLTSHTRYLVCISAFNAAGDGPRSRPSAGRTHQAAPSAPSFLVFSEITSTTL 1770

Query: 521  YLKWVKPEQPNGVLMGYKIKYQ 542
             + W +P   NGVL GY++ Y+
Sbjct: 1771 NVSWGEPTAANGVLQGYRVVYE 1792



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 10/203 (4%)

Query: 397  TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIRE 454
            T+Q P +       ++        + W P+      G+    GY+++ W       ++ +
Sbjct: 1120 TLQAPPDVAPGSVSVRTASESSLRMRWVPLPDTQYNGNPESVGYRIKFWRVDLQPSALLK 1179

Query: 455  LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEAI 513
            +I ++ E   T +      ++   ++ AFN    GP +E++   T E VP    +++ A 
Sbjct: 1180 VISDRLERECT-IQDLEEWTEYELQIQAFNAIGAGPWNEVVGVRTRESVPSAPPENVSAE 1238

Query: 514  PLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAG 571
             + S+   L W  V   + NG+++GYKI Y++ K     P   R   +    T S  L+G
Sbjct: 1239 AVSSTQILLTWSAVPESEQNGLILGYKILYKA-KDLDSEP---RSQTVRGNHTQSCLLSG 1294

Query: 572  LEPSTKYRIHLAGYTKAGDGAES 594
            L     Y I +  +T+ GDG  S
Sbjct: 1295 LRKYVLYEIRVLAFTRIGDGVPS 1317



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 119/289 (41%), Gaps = 34/289 (11%)

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIREL--------IVNKGESTTTEVDKFVP 472
            +SP+S    FR GY  +T    W  +   G + E         + N+ ++   EV    P
Sbjct: 1033 ISPRSATLQFRPGYDGKTSICKWIVEGQVGVLGEEEEWVSLHEVDNEPDAQMLEVPNLTP 1092

Query: 473  ASKNFARVLAFNGAYNGP---PSEIISFVT--PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     P   PS +I  +   P+  PG+V    A     S+  ++WV  
Sbjct: 1093 YTHYRFRMRQVNVVGASPLSQPSRVIQTLQAPPDVAPGSVSVRTA---SESSLRMRWVPL 1149

Query: 527  PE-QPNG--VLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            P+ Q NG    +GY+IK+  V   +   LL+    ISD       +  LE  T+Y + + 
Sbjct: 1150 PDTQYNGNPESVGYRIKFWRVD-LQPSALLK---VISDRLERECTIQDLEEWTEYELQIQ 1205

Query: 584  GYTKAGDGAESKYLFY-----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  ++ +       VP   P+NV     +   ++++W+A+PE E N     Y+
Sbjct: 1206 AFNAIGAGPWNEVVGVRTRESVPSAPPENVSAEAVSSTQILLTWSAVPESEQNGLILGYK 1265

Query: 639  IFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDG 687
            I ++  +         V        +L+    +  YEI+V+      DG
Sbjct: 1266 ILYKAKDLDSEPRSQTVRGNHTQSCLLSGLRKYVLYEIRVLAFTRIGDG 1314



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 93/229 (40%), Gaps = 24/229 (10%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P N   ++ +++      W+P   Q + G  +GYK+  W   D  GS+  + +  
Sbjct: 820  VPTAPPQNVQ-VEAVNSTTIQFLWSPPPQQFINGINQGYKLLAW-PVDAPGSVTVVTIAP 877

Query: 460  G-----ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                      T + K+   +  +  VL F    +GP S      T E  PG V  L    
Sbjct: 878  DFHGVHSGCITNLKKY---TTYYTSVLCFTTPGDGPRSAPQLLRTLEDKPGAVGHLSFTE 934

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
            +  ++  + W +P + NG++ GY++ ++ V G     L          TT   K+ GL  
Sbjct: 935  ILDTSLKVSWQEPVEKNGIITGYQLSWE-VYGRNESRLTRT----LTNTTLEYKITGLSS 989

Query: 575  STKYRIHLAGYTKAGDG--AESKYLFYVPFKNPDNVEGRGSTPNNLVIS 621
             T Y I +A  T  G G    S     VP + P         P+NLVIS
Sbjct: 990  LTTYTIEVAAVTAKGSGWVTSSTISSGVPPELP-------GAPSNLVIS 1031



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 3/144 (2%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P N +  + + + + +++W+ V      G   GYK+  +  KD +   R   V  
Sbjct: 1227 VPSAPPENVS-AEAVSSTQILLTWSAVPESEQNGLILGYKI-LYKAKDLDSEPRSQTVRG 1284

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNG-PPSEIISFVTPEGVPGTVQSLEAIPLGSS 518
              + +  +           RVLAF    +G P S +++  T +  PG    L    +  +
Sbjct: 1285 NHTQSCLLSGLRKYVLYEIRVLAFTRIGDGVPSSPVLTERTKDDAPGPPIRLVFPEVRLT 1344

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQ 542
            +  + W  PE+PNG+++GY+I Y+
Sbjct: 1345 SVRIVWQPPEEPNGIILGYQIAYR 1368



 Score = 47.0 bits (110), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 109/283 (38%), Gaps = 45/283 (15%)

Query: 343  WLRGSEPIDFESEPRFVQS----NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
            W   S  I  E+    ++S      Y L V  ++++    Y+          E +A  T+
Sbjct: 1476 WQTYSSSISHEATSCIIESLNPFTSYKLRVKATNDIGDSDYSA---------ETEAVTTL 1526

Query: 399  Q-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD---GEGSIRE 454
            Q VP E PS+  L+        +V W P   +SL G   GY++  + E D   G  +  +
Sbjct: 1527 QDVPDEPPSS-VLVTPHTTSSVLVQWQPPKAESLNGLLLGYRIY-YRELDYDAGSATESK 1584

Query: 455  LIVN----KGESTTTEVDKFVPAS-----------KNFARVLAFNGAYN----GPPSEII 495
             + N    + E T     K V +S           K + R      AYN     P S  +
Sbjct: 1585 AVKNPSALRAELTPQSSFKTVNSSSALTTYELTQLKKYKRYEVLMTAYNVIGESPTSTPV 1644

Query: 496  SFVTPEGVPGTV-QSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPL 552
                 E  P    Q+++   L +S   L W  P  +  NG + GYKI Y       V   
Sbjct: 1645 EVFVGEAAPAMAPQNIQVNSLSASQLELTWDPPPADSQNGNIQGYKIYYWE---GDVQND 1701

Query: 553  LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK 595
             E++   S     SA    L   T+Y + ++ +  AGDG  S+
Sbjct: 1702 TEKVKVFSSLRQLSAS-KNLTSHTRYLVCISAFNAAGDGPRSR 1743


>gi|345305290|ref|XP_001513017.2| PREDICTED: protein sidekick-1 [Ornithorhynchus anatinus]
          Length = 2113

 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 177/629 (28%), Positives = 269/629 (42%), Gaps = 56/629 (8%)

Query: 44  VALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFSDQ 99
           V   + ++ L CI    P+ +    W ++GV      +I+ G  ++G+ L I +   SD 
Sbjct: 234 VVAGSSEITLECIANARPVEELSVTWKRNGV------KITSGIHSFGRRLTISNPTSSDI 287

Query: 100 GSYTCEV-----SNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECKASGLP 153
           G Y CE      +     AK+Y   LS++  PYFT EP   I    ++TV   C+A G+P
Sbjct: 288 GMYICEAKLKDSAFETARAKAY---LSIIEPPYFTAEPMSRILTEVDKTVDLLCQAMGVP 344

Query: 154 EPEIHWVHNGKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYV 212
            P + W  +  PIS+   NPR K+     + I+ L   D+G + C A N  G +    Y+
Sbjct: 345 VPNLEWYKDSVPISKLQ-NPRYKLLMSGSLQIQKLHPDDSGIFQCFARNEAGEIQTHTYL 403

Query: 213 NVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTIL 267
                AP  ++ P D    DG T VLTC V GAPKP + W    + L  G     R+ +L
Sbjct: 404 EATNIAPTFSQRPADTTVTDGMTAVLTCEVSGAPKPAITWKRGDQILASGSVQIPRFILL 463

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
           E+G L+I  V   D+G YTC+A N  G+   +  LTV   T I   PED  V  G +AT 
Sbjct: 464 ESGGLQIAPVFLHDAGNYTCYAINAEGSLNANAMLTVWNRTSIVHPPEDIVVIKGTTATL 523

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A  DP + +   W +    I   +  R + S D SL ++++   D G YTC   +  
Sbjct: 524 LCGATHDPRISIRYFWKKDGIIIKSAASSRLMISKDGSLLISQTWSGDIGDYTCEIVSVG 583

Query: 388 DFIEAQATLTVQVPLEAPSNFTL-IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
                 A L V     +P N    +    ++  ++SW  V P         Y V+  +E 
Sbjct: 584 GNDSKMARLEVIELPHSPQNLMASLNSSHSRTVILSW--VRPFDGNSPLLYYIVEL-SEN 640

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPG 505
           +    +    ++    + T +    PA     RV A N    G  S E    + PE  P 
Sbjct: 641 NSPWKVHLSNIDPKTMSVT-ISDLTPARTYQFRVCAVNQVGKGQYSMETSRLMLPEEPPS 699

Query: 506 T-VQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLP----- 557
              +++ A    + +  ++W  P +   NG+L GY ++Y+          L  LP     
Sbjct: 700 APPKNIVASGRTNQSIMVQWQPPPETEHNGILHGYNLRYR----------LAGLPGEYQH 749

Query: 558 -YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEGR 611
             I+ P      +  L   T+Y I +A Y  AG G  S+      L  VP   P NV+  
Sbjct: 750 RNITSPEINYCLVKDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTE 809

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
                 +   W   P+   N  +  Y++ 
Sbjct: 810 ALNSTTIRFLWNPPPQQFINGINQGYKLM 838



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 174/667 (26%), Positives = 260/667 (38%), Gaps = 100/667 (14%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN-GVGEAK-SYSI 118
           P PQ  W +DG  I PS R++       L+I     SD G Y  +  N   GE K S  I
Sbjct: 149 PKPQVTWFRDGHKIIPSHRVAI-TLENQLVILATTTSDAGGYYVQAVNEKNGENKTSPFI 207

Query: 119 DLSVL--------AAPYFTVEPEFIN-AAEEETVTFECKASGLP--EPEIHWVHNGKPIS 167
            LSV          AP   + P   +  A    +T EC A+  P  E  + W  NG  I+
Sbjct: 208 YLSVANENNASRPVAPVIVIPPCNTSVVAGSSEITLECIANARPVEELSVTWKRNGVKIT 267

Query: 168 QAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT---NSLGYVYKDVYVNVLAHAPEITEA 224
               +  R     R+TI N   SD G Y C A    ++        Y++++   P  T  
Sbjct: 268 SGIHSFGR-----RLTISNPTSSDIGMYICEAKLKDSAFETARAKAYLSII-EPPYFTAE 321

Query: 225 PKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITDVAFA 280
           P      +  KTV L C+  G P P + W  +     +L   RY +L +G L+I  +   
Sbjct: 322 PMSRILTEVDKTVDLLCQAMGVPVPNLEWYKDSVPISKLQNPRYKLLMSGSLQIQKLHPD 381

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHI----TDQPEDYEVEAGQSATFRCNAVSDPS 336
           DSG + CFARN+ G  Q   + T  E T+I    + +P D  V  G +A   C     P 
Sbjct: 382 DSGIFQCFARNEAGEIQ---THTYLEATNIAPTFSQRPADTTVTDGMTAVLTCEVSGAP- 437

Query: 337 LKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
            K +I W RG + +   S   PRF+      L +      D+G YTC A      + A A
Sbjct: 438 -KPAITWKRGDQILASGSVQIPRFILLESGGLQIAPVFLHDAGNYTCYAINAEGSLNANA 496

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRG--HFRGYKVQTWTEKDGEGSI 452
            LTV         +    ++   + +V     +   L G  H     ++ + +KDG    
Sbjct: 497 MLTV---------WNRTSIVHPPEDIVVIKGTTATLLCGATHDPRISIRYFWKKDG---- 543

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA 512
             +I+    S+   + K      +      ++G       EI+S     G    +  LE 
Sbjct: 544 --IIIKSAASSRLMISK----DGSLLISQTWSGDIGDYTCEIVSV---GGNDSKMARLEV 594

Query: 513 IPL--------------GSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
           I L               S    L WV+P   N  L+ Y ++          P    L  
Sbjct: 595 IELPHSPQNLMASLNSSHSRTVILSWVRPFDGNSPLLYYIVELSE----NNSPWKVHLSN 650

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG---AESKYLFY---VPFKNPDNVEGRG 612
           I DP T S  ++ L P+  Y+  +    + G G    E+  L      P   P N+   G
Sbjct: 651 I-DPKTMSVTISDLTPARTYQFRVCAVNQVGKGQYSMETSRLMLPEEPPSAPPKNIVASG 709

Query: 613 STPNNLVISWTAMPEIEHNAP----HFKYRI------FWRRHNTGEAWNQ---DDVLDWR 659
            T  ++++ W   PE EHN      + +YR+      +  R+ T    N     D++ W 
Sbjct: 710 RTNQSIMVQWQPPPETEHNGILHGYNLRYRLAGLPGEYQHRNITSPEINYCLVKDLIIWT 769

Query: 660 QSELVLA 666
           Q E+ +A
Sbjct: 770 QYEIQVA 776



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 146/606 (24%), Positives = 222/606 (36%), Gaps = 62/606 (10%)

Query: 53   LFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKS--LIIKHVEFSDQGSYTCEVSNG 109
            L C   G P P   W + D +  + S +I +    +S  L I  V   D G+YTC   N 
Sbjct: 429  LTCEVSGAPKPAITWKRGDQILASGSVQIPRFILLESGGLQIAPVFLHDAGNYTCYAINA 488

Query: 110  VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--WVHNGKPIS 167
             G   + ++ L+V         PE I   +  T T  C A+  P   I   W  +G  I 
Sbjct: 489  EGSLNANAM-LTVWNRTSIVHPPEDIVVIKGTTATLLCGATHDPRISIRYFWKKDGIIIK 547

Query: 168  QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAPEITEAP 225
             A  +         + I      D G+Y C   +  G   K   + V  L H+P+   A 
Sbjct: 548  SAASSRLMISKDGSLLISQTWSGDIGDYTCEIVSVGGNDSKMARLEVIELPHSPQNLMAS 607

Query: 226  KDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTILETGDLK-----ITDVAF 279
             +  +   +TV+L+  R F    P + +I    E        L   D K     I+D+  
Sbjct: 608  LN--SSHSRTVILSWVRPFDGNSPLLYYIVELSENNSPWKVHLSNIDPKTMSVTISDLTP 665

Query: 280  ADSGEYTCFARNKLGTAQGS---GSLTVKEHTHITDQPEDYEVEAGQS------------ 324
            A + ++   A N++G  Q S     L + E       P    V +G++            
Sbjct: 666  ARTYQFRVCAVNQVGKGQYSMETSRLMLPEEP--PSAPPKNIVASGRTNQSIMVQWQPPP 723

Query: 325  ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             T     +   +L+  +  L G       + P         L +    E+    Y     
Sbjct: 724  ETEHNGILHGYNLRYRLAGLPGEYQHRNITSPEINYCLVKDLIIWTQYEIQVAAYNGAGL 783

Query: 385  TELDFIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW 443
                F  A    T+Q VP   P N    + +++      WNP   Q + G  +GYK+  W
Sbjct: 784  GV--FSRAVTEYTLQGVPTAPPQNVQ-TEALNSTTIRFLWNPPPQQFINGINQGYKLMAW 840

Query: 444  TEKDGEGSIRELI------VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
                 E  I   I      V+ G    T + KF   +     V+ F    +GP S     
Sbjct: 841  PVSVPEAIIVVTIAPDFHGVHNG--YITNLKKF---TAYLTSVVCFTTPGDGPQSPPQLI 895

Query: 498  VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLP 557
             T E  PG V  L    +  ++  + W +P + NG++ GY+I ++            RL 
Sbjct: 896  WTHEDKPGAVGHLSFTEILDTSLKVSWQEPVEKNGIITGYQISWEVYSRND-----SRLT 950

Query: 558  YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG--AESKYLFYVPFKNPDNVEGRGSTP 615
            +  + TT   K+ GL   T Y I +A  T  G G    S     VP + P         P
Sbjct: 951  HSLNSTTHEYKIKGLSSLTTYTIDVAAVTIKGIGLVTSSTISSGVPPELP-------GAP 1003

Query: 616  NNLVIS 621
            +NLVIS
Sbjct: 1004 SNLVIS 1009



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 90/381 (23%), Positives = 147/381 (38%), Gaps = 48/381 (12%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           ++ L   ++ L C+  G+      W  +   ++    I+  +     II  ++  D G Y
Sbjct: 44  QIHLEGNRLVLTCLAEGS------WPLEFKWLHNDSEITSYSSEYKYIIPSLQRFDNGFY 97

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKAS-------GLPEP 155
            C V N +G       ++ V          +F+ A + +TV+    A          P+P
Sbjct: 98  QCVVRNRMGALLQRKSEVQV------AYMGDFMAADQRKTVSPGMAAVLNLLQIISYPKP 151

Query: 156 EIHWVHNGKPISQAPPNPRRKVG---PNRITIENLRKSDTGNYGCNATNSLGYVYKD--- 209
           ++ W  +G  I      P  +V     N++ I     SD G Y   A N      K    
Sbjct: 152 QVTWFRDGHKII-----PSHRVAITLENQLVILATTTSDAGGYYVQAVNEKNGENKTSPF 206

Query: 210 VYVNVLAH-------APEITEAPKDEYTVDGKT-VVLTCRVFGAPKPE--VNWIHNQKEL 259
           +Y++V          AP I   P +   V G + + L C     P  E  V W  N  ++
Sbjct: 207 IYLSVANENNASRPVAPVIVIPPCNTSVVAGSSEITLECIANARPVEELSVTWKRNGVKI 266

Query: 260 TGGRYTILETGDLKITDVAFADSGEYTCFARNK---LGTAQGSGSLTVKEHTHITDQPED 316
           T G ++      L I++   +D G Y C A+ K     TA+    L++ E  + T +P  
Sbjct: 267 TSGIHSFGR--RLTISNPTSSDIGMYICEAKLKDSAFETARAKAYLSIIEPPYFTAEPMS 324

Query: 317 YEV-EAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
             + E  ++    C A+  P   L   W + S PI     PR+      SL + K    D
Sbjct: 325 RILTEVDKTVDLLCQAMGVPVPNLE--WYKDSVPISKLQNPRYKLLMSGSLQIQKLHPDD 382

Query: 376 SGQYTCRAQTELDFIEAQATL 396
           SG + C A+ E   I+    L
Sbjct: 383 SGIFQCFARNEAGEIQTHTYL 403



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 114/302 (37%), Gaps = 30/302 (9%)

Query: 118 IDLSVLAAPYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRK 176
           I  S   APYF  EP       E   +   C A G    E  W+HN   I+         
Sbjct: 26  ITFSDDVAPYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWLHNDSEITSYSSE---- 81

Query: 177 VGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTV 236
               +  I +L++ D G Y C   N +G + +      +A+  +   A + +    G   
Sbjct: 82  ---YKYIIPSLQRFDNGFYQCVVRNRMGALLQRKSEVQVAYMGDFMAADQRKTVSPGMAA 138

Query: 237 VLT-CRVFGAPKPEVNWIHN-QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLG 294
           VL   ++   PKP+V W  +  K +   R  I     L I     +D+G Y   A N+  
Sbjct: 139 VLNLLQIISYPKPQVTWFRDGHKIIPSHRVAITLENQLVILATTTSDAGGYYVQAVNEKN 198

Query: 295 TAQGSGS---LTVKEHTH--------ITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIV 342
               +     L+V    +        I   P +  V AG S  T  C A + P  +LS+ 
Sbjct: 199 GENKTSPFIYLSVANENNASRPVAPVIVIPPCNTSVVAGSSEITLECIANARPVEELSVT 258

Query: 343 WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ---TELDFIEAQATLTVQ 399
           W R    I        + S    LT++  +  D G Y C A+   +  +   A+A L++ 
Sbjct: 259 WKRNGVKIT-----SGIHSFGRRLTISNPTSSDIGMYICEAKLKDSAFETARAKAYLSII 313

Query: 400 VP 401
            P
Sbjct: 314 EP 315



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 8/181 (4%)

Query: 365  SLTVTKSSELDSGQYTCRAQTELDFIEAQATLT---VQVPLEAPSNFTLIQVIDAKKAVV 421
            S TVT  S L +       Q+    + + + LT   +  P  AP N   +  + A +  +
Sbjct: 1561 SKTVTNPSALRA---EISPQSSFKTVNSSSALTTYELTPPAMAPLNVQ-VNTLTASQLEI 1616

Query: 422  SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 481
            +W+P   +S  G+ +GYK+  + E+D   +  ++ V     TT ++      +K    + 
Sbjct: 1617 TWDPPPLESQNGNIQGYKIY-YQEEDNSNTTEKIKVLFLPETTIKLKNLTSHTKYLVSIS 1675

Query: 482  AFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY 541
            AFN A +GP S      T +  P     L    + S+   + W +P   NG+L GY++ Y
Sbjct: 1676 AFNAAGDGPKSSPRLGTTYQAAPNAPSFLAFSEITSTTLNVSWGEPTAANGILQGYRVVY 1735

Query: 542  Q 542
            +
Sbjct: 1736 E 1736



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 3/144 (2%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N + ++ + + + +++W  V  Q   G   GYK+  +  KD +   +  +V  
Sbjct: 1205 VPSAAPENVS-VEAVSSTQILLTWAAVPEQDQNGLILGYKI-LYKAKDLDSEPQTYVVRG 1262

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              + +  +           +VLAF    NG PS   I+  T +  PG    L    +  +
Sbjct: 1263 NHTQSVLLAGLRKYVLYEIQVLAFTRIGNGVPSAPPITERTKDDAPGPPVRLVFPEVKLT 1322

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQ 542
            +  + W  PE+PNG+++GY+I Y+
Sbjct: 1323 SVRIVWQPPEEPNGIILGYQIAYR 1346



 Score = 47.0 bits (110), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 89/229 (38%), Gaps = 57/229 (24%)

Query: 388  DF-IEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE 445
            DF +E +A  T+Q VP E PS+ + +        ++ W P   +SL G   GY++     
Sbjct: 1493 DFSVETEAVTTLQDVPGEPPSSIS-VTPHTTSSVLIQWKPPRDKSLNGLLVGYRIY---- 1547

Query: 446  KDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPG 505
                   REL    G           P SK               PS + + ++P+    
Sbjct: 1548 ------YRELDYETGSG---------PESKTVTN-----------PSALRAEISPQSSFK 1581

Query: 506  TVQSLEAIP------------------LGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVK 545
            TV S  A+                   L +S   + W  P  E  NG + GYKI YQ   
Sbjct: 1582 TVNSSSALTTYELTPPAMAPLNVQVNTLTASQLEITWDPPPLESQNGNIQGYKIYYQEED 1641

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
             +      E++  +  P TT  KL  L   TKY + ++ +  AGDG +S
Sbjct: 1642 NSNT---TEKIKVLFLPETT-IKLKNLTSHTKYLVSISAFNAAGDGPKS 1686



 Score = 46.2 bits (108), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 123/308 (39%), Gaps = 22/308 (7%)

Query: 390  IEAQATLTVQVPLEAPSNFTLI--QVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
            +EA    T +    AP +  LI    + ++   + W P S  S     R + VQ     D
Sbjct: 1394 LEATVITTEKRERPAPPSELLIPQSKVSSRSLQLQWIPGSDGS--SPIRYFTVQVRELPD 1451

Query: 448  GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGT 506
            GE       ++  E+T   +++  P +    R+ A N   +   S E  +  T + VPG 
Sbjct: 1452 GEWQTYSSSISH-EATVCVIERLNPFTSYKLRLKATNDIGDSDFSVETEAVTTLQDVPGE 1510

Query: 507  V-QSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVK-GTKVGPLLERLPYISDP 562
               S+   P  +S+  ++W  P     NG+L+GY+I Y+ +   T  GP  + +      
Sbjct: 1511 PPSSISVTPHTTSSVLIQWKPPRDKSLNGLLVGYRIYYRELDYETGSGPESKTV------ 1564

Query: 563  TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISW 622
            T  SA  A + P + ++      T     A + Y    P   P NV+    T + L I+W
Sbjct: 1565 TNPSALRAEISPQSSFK------TVNSSSALTTYELTPPAMAPLNVQVNTLTASQLEITW 1618

Query: 623  TAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTW 682
               P    N     Y+I+++  +      +  VL   ++ + L N  +   Y + +    
Sbjct: 1619 DPPPLESQNGNIQGYKIYYQEEDNSNTTEKIKVLFLPETTIKLKNLTSHTKYLVSISAFN 1678

Query: 683  TEKDGEGS 690
               DG  S
Sbjct: 1679 AAGDGPKS 1686


>gi|348502549|ref|XP_003438830.1| PREDICTED: neurofascin-like [Oreochromis niloticus]
          Length = 1149

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 186/709 (26%), Positives = 291/709 (41%), Gaps = 59/709 (8%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           + L+ +++ L CI  G P P   W+KDG  +  + R+   N+ K + I    F D G YT
Sbjct: 246 LVLQGEELLLECIAAGMPTPHITWAKDGEDLQVTSRMKVKNFNKMIQIPKASFEDAGEYT 305

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++I + V A P++  +P  +  A EE     C+A G P P I W  NG
Sbjct: 306 CTAKNRLGYAE-HTITVRVKATPFWLEKPTNLILAPEENGRLVCRADGAPRPTISWFING 364

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           +PI  A P P R+V    +   ++   +T  Y CNA+N  GY+  + ++NVL   P I  
Sbjct: 365 EPIETATPLPNRQVSGETLIFRSVTTENTAVYQCNASNQYGYLLANAFINVLHATPRILG 424

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNWI-HNQKELTGGRYTILETGDLKITDVAFA 280
           A ++E+    +G    L C+ FG+P PE+ W  + Q  L G R+     G L+I  +   
Sbjct: 425 A-RNEFIKVTEGSRTFLDCQYFGSPLPELRWSKYGQGNLEGNRFKTHSNGTLEIKHIKIE 483

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D G Y C   N  G  +    + VKE   I  +P+  +V         C   +D +  ++
Sbjct: 484 DQGTYVCVVSNIAGRDEDQVRVEVKEPILIVTRPQSMKVMRATDVRLECGVKADVTTPIT 543

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
             WL+  + +         +SN   L +T  +  D G YTC  ++EL+   A A L V  
Sbjct: 544 TTWLKNKKHLTLGWRISMDESN---LVITNVNTGDEGNYTCVIKSELEQKSASAHLMV-- 598

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            ++ P+  T +++ D  +  V  + V   S      G+ VQ   +    G  R L    G
Sbjct: 599 -MDRPNPPTNLELSDPYERTVRLSWVPGDSNHSPITGFLVQYDDDDWLPGKWRNLSTYPG 657

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV--QSLEAIPLGSS 518
              +  +   +P +    RV+A N      PS         G P  +  ++L+ +    +
Sbjct: 658 NLNSV-ILHLIPFTYYEFRVIAINEIGASRPSRPSKRFQTSGAPPDIIPKNLKGVGTWRN 716

Query: 519 AFYLKW--VKPEQPNGVLMGYKIKYQ---SVKGTKVGPLLERLPYISDPTTTSAKLAGLE 573
              + W  +   + NG  + Y + ++   S +  K         YI D  T         
Sbjct: 717 NMEISWEPLTYREWNGPHLKYLVWWRRRDSREEWKNATTKWLKYYIYDADTF-------- 768

Query: 574 PSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGST-PNNLVISWTAMPEIEHNA 632
             T Y I +      G G ES      P     + EGR +T P NL +S     +IE   
Sbjct: 769 --TPYEIKVQAVNDFGLGPES------PVVIGYSGEGRPTTAPLNLRVS-----DIESTQ 815

Query: 633 PHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIR 692
               +         GE   +  V  WR S  +                 W   D     +
Sbjct: 816 VTLHWDPVTSDTIMGEL-KEYKVYYWRDSSQL----------------RWHWVDRGMKSK 858

Query: 693 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
              +N G   +  +D  +P S     ++  N  Y GPPS  I F TPEG
Sbjct: 859 AFPIN-GPDPSGVLDDLIPYSNYKMYIVVANNRYEGPPSNNIHFSTPEG 906



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 19/202 (9%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P  AP N   +  I++ +  + W+PV+  ++ G  + YKV  W +      +R   V++G
Sbjct: 799 PTTAPLNLR-VSDIESTQVTLHWDPVTSDTIMGELKEYKVYYWRDS---SQLRWHWVDRG 854

Query: 461 EST----------TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSL 510
             +          +  +D  +P S     ++  N  Y GPPS  I F TPEGVP   +S 
Sbjct: 855 MKSKAFPINGPDPSGVLDDLIPYSNYKMYIVVANNRYEGPPSNNIHFSTPEGVPSAPRSF 914

Query: 511 EAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPL-LERLPYISDPTTTSAKL 569
                   + Y+ W  P +PNG++ GY +KYQ+V  T+   L +E LP    P  TS  +
Sbjct: 915 RIQQRHLDSIYVDWGLPAEPNGIITGYSLKYQTVNATRGEELRVEELP----PNVTSFSI 970

Query: 570 AGLEPSTKYRIHLAGYTKAGDG 591
              +  T+YR  +A  T+ G G
Sbjct: 971 RRYDRYTRYRFSVAARTRLGIG 992



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 121/297 (40%), Gaps = 33/297 (11%)

Query: 142 TVTFECKASGLPEPEIHWVHNGKPISQAPPNP---RRKVGPNRITIENLRKSDTGNYGCN 198
           T+  EC+A G P P   W  NGK  + A  +    RR+ G   I   N  +     Y C 
Sbjct: 47  TMVIECEAKGNPHPIFSWRRNGKYFNVARDSQVSMRRRSGTLDIYARNNPEKYEAEYQCI 106

Query: 199 ATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTC-RVFGAPKPEVNWIHN- 255
           A+N  G  Y    +  L   P       +   V  G  +VL+C    G PKPE  W+   
Sbjct: 107 ASNQYGSAYSHKIILQLYRPPVWPREIVEPVVVSAGLPLVLSCDPPPGPPKPETYWMSTF 166

Query: 256 ---QKELTGGRYTILETGDLKITDVAFADS-GEYTCFARNKL-GTAQGSGSLTVKEHT-- 308
              Q      R ++  +GDL  ++V F DS  +Y C AR       Q    + VK  T  
Sbjct: 167 PTMQPVRQDRRVSMGVSGDLYFSNVLFNDSVVDYCCNARFPYKNVIQQKMPVVVKVLTTR 226

Query: 309 ----------HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF 358
                       T       V  G+     C A   P+    I W +  E +   S  + 
Sbjct: 227 AVVEAAPTWLSPTGSSSSVLVLQGEELLLECIAAGMPTPH--ITWAKDGEDLQVTSRMK- 283

Query: 359 VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP-----LEAPSNFTL 410
           V++ +  + + K+S  D+G+YTC A+  L +  A+ T+TV+V      LE P+N  L
Sbjct: 284 VKNFNKMIQIPKASFEDAGEYTCTAKNRLGY--AEHTITVRVKATPFWLEKPTNLIL 338


>gi|432115920|gb|ELK37062.1| Protein sidekick-2 [Myotis davidii]
          Length = 1681

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 177/605 (29%), Positives = 257/605 (42%), Gaps = 43/605 (7%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V     +V + C+    PL +   +W KDGV +  S  IS  +Y + L I +   S
Sbjct: 152 KNTSVVAGTSEVTMECVANARPLIKLHILWKKDGVLL--SGGIS--DYNRRLTIPNPTGS 207

Query: 98  DQGSYTCEVSNGVGEAKSY--SIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPE 154
           D G Y CE         S      LSVL  P F  EPE  I A  E+ V   C+A G+P 
Sbjct: 208 DAGFYECEAVLRSSSVPSVVRGAYLSVLEPPQFVKEPERHITAEMEKVVDIPCRAKGVPP 267

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
           P I W  +   +  A  +  R+ G   + I  L   DTG + C A NS G V    Y+ V
Sbjct: 268 PSITWYKDAAVVEVARLSRFRQRGDGGLQISGLVPDDTGMFQCYARNSAGEVQTSTYLAV 327

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILET 269
            + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T+LE+
Sbjct: 328 TSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLES 387

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L ++    +D+G YTC A N            V   T IT  P+D  V  G  A+  C
Sbjct: 388 GSLLVSPARISDAGTYTCLATN-----------FVWARTRITRPPQDQSVIKGTQASMVC 436

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
               DP + +  VW +    +  E+ PR     + SL +T++   D G YTCR  +    
Sbjct: 437 GVAHDPRVTIRYVWEKDGAALGVENSPRVRLDKNGSLHITQTWSGDIGTYTCRVLSAGGN 496

Query: 390 IEAQATLTVQVPLEAPSNFTLIQVIDAKKAV-VSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
               A L V+    AP +         ++A+ ++W    P         Y ++  +E + 
Sbjct: 497 DSRSAHLRVRQLPHAPEHPVATLSASERRAINLTW--AKPFDGNSPLIRYVLEM-SENNA 553

Query: 449 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ 508
             ++    V+  E+T+  V   VPA     R+ A N    G  S+    V+    P T  
Sbjct: 554 PWAVLLASVDP-EATSVVVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAP 612

Query: 509 SLEAIPLGSS--AFYLKWVKPEQ--PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT 564
               I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I+D   
Sbjct: 613 PQNVIASGRTNQSIMIQWQPPPENHQNGLLKGYIIRY-CLAGLPVG---YQFKNITDADV 668

Query: 565 TSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLV 619
            +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    +    + 
Sbjct: 669 NNLLLEDLIIWTNYEIEVAAYNSAGLGVYSGKVTEWTLQGVPTVPPGNVHAEATNSTTIR 728

Query: 620 ISWTA 624
            +W A
Sbjct: 729 FTWNA 733



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 181/680 (26%), Positives = 274/680 (40%), Gaps = 78/680 (11%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K+Q V+  +   +R  ++  F      P PQ  W +DG  I PS RI+      +L+I  
Sbjct: 50  KRQSVSHGEAAVIRAPRIASF------PRPQVTWFRDGRKIPPSSRIAI-TLENTLVILS 102

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFINAAEEET------- 142
               D G Y  + V++  G+ K S  I L+V  +  P   + P  I   +  +       
Sbjct: 103 TVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSE 162

Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
           VT EC A+  P  ++H  W  +G  +S    +  R     R+TI N   SD G Y C A 
Sbjct: 163 VTMECVANARPLIKLHILWKKDGVLLSGGISDYNR-----RLTIPNPTGSDAGFYECEAV 217

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+  V +  Y++VL   P+  + P+   T + + VV + CR  G P P + W  + 
Sbjct: 218 LRSSSVPSVVRGAYLSVL-EPPQFVKEPERHITAEMEKVVDIPCRAKGVPPPSITWYKDA 276

Query: 257 KELTGGRYTILET---GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHITD 312
             +   R +       G L+I+ +   D+G + C+ARN  G  Q S  L V     +IT 
Sbjct: 277 AVVEVARLSRFRQRGDGGLQISGLVPDDTGMFQCYARNSAGEVQTSTYLAVTSIAPNITR 336

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTK 370
            P D  V  G S    C     P  + +I W +G   +   S   PRF      SL V+ 
Sbjct: 337 GPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTLLESGSLLVSP 394

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV-VSWNPVSPQ 429
           +   D+G YTC A    +F+ A+  +T       P + ++I+   A     V+ +P    
Sbjct: 395 ARISDAGTYTCLAT---NFVWARTRIT-----RPPQDQSVIKGTQASMVCGVAHDP---- 442

Query: 430 SLRGHFRGYKVQTWTEKDG-----EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN 484
             R   R      W EKDG     E S R  +   G    T+       +    RVL+  
Sbjct: 443 --RVTIR----YVW-EKDGAALGVENSPRVRLDKNGSLHITQTWSGDIGTYT-CRVLS-A 493

Query: 485 GAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
           G  +   + +     P      V +L A      A  L W KP   N  L+ Y ++  S 
Sbjct: 494 GGNDSRSAHLRVRQLPHAPEHPVATLSASE--RRAINLTWAKPFDGNSPLIRYVLE-MSE 550

Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
                  LL  +    DP  TS  + GL P+  Y+  L      G G  SK    V    
Sbjct: 551 NNAPWAVLLASV----DPEATSVVVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPE 606

Query: 601 --PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDW 658
             P   P NV   G T  +++I W   PE   N     Y I +        +   ++ D 
Sbjct: 607 EPPTAPPQNVIASGRTNQSIMIQWQPPPENHQNGLLKGYIIRYCLAGLPVGYQFKNITDA 666

Query: 659 RQSELVLANQPTFQPYEIKV 678
             + L+L +   +  YEI+V
Sbjct: 667 DVNNLLLEDLIIWTNYEIEV 686



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 11/174 (6%)

Query: 422 SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR-- 479
           +WN  SPQ + G  +GYK+  W E + E  +  +        +  V  FV   K F    
Sbjct: 730 TWNAPSPQFINGINQGYKLIAW-EPEQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYF 787

Query: 480 --VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
             VL F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY
Sbjct: 788 TSVLCFTTPGDGPRSSPQLVRTLEDVPGPVGHLSFSDILDTSLKVSWQEPGEKNGILTGY 847

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           +I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G
Sbjct: 848 RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTAKGQG 896



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 88/205 (42%), Gaps = 21/205 (10%)

Query: 456  IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSL 510
            + N+ ++ + EV    P +    R+   N     PPS+    +      P+  P  V   
Sbjct: 960  LTNEPDARSMEVPDLNPFTHYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLR 1019

Query: 511  EAIPLGSSAFYLKWVK-PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
             A     ++ +L+W   PE     N   +GYKIKY    G   G +L  +  + D     
Sbjct: 1020 TA---SETSLWLRWTPLPEMEYNGNPESVGYKIKYSRADGH--GRVLSHV--VLDRVERE 1072

Query: 567  AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVIS 621
              +  LE  T+YR+ +  +   G+G  S+ +       VP   P NV    +T +++++ 
Sbjct: 1073 YTIEDLEEWTEYRVQVQAFNAIGNGPWSQMVMGRTRESVPSSGPTNVSALATTSSSMLVR 1132

Query: 622  WTAMPEIEHNAPHFKYRIFWRRHNT 646
            W+ +PE E N     Y++ +R  ++
Sbjct: 1133 WSPVPEAERNGLLLGYKVLYREKDS 1157



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+PV      G   GYKV  + EKD +   R  +V  
Sbjct: 1111 VPSSGPTNVSALATTSSS-MLVRWSPVPEAERNGLLLGYKV-LYREKDSDPQPRVWLVEG 1168

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   +   T + VPG    +    + ++
Sbjct: 1169 NASLSVQLTGLGKYVLYEVQVLAFTRIGDGSPSRPPVLERTLDDVPGPPMGILFPEVRTT 1228

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P + Y
Sbjct: 1229 SVRLVWQPPAAPNGIILAYQITHRLNATTANTASVEVL----APSARQYTATGLKPESVY 1284

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1285 LFRITAQTRKGWGEAAEAL 1303



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 103/250 (41%), Gaps = 39/250 (15%)

Query: 414  IDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDK 469
            + A+  ++SW P    +SP       R Y VQT     G  ++    V+   S    VD+
Sbjct: 1326 VKARSVLLSWEPGSDGLSP------VRYYSVQTRELPSGRWALHSASVSHNASACV-VDR 1378

Query: 470  FVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPGTVQSLEAI-PLGSSAFYLKWVKP 527
              P +    RV A N   +   SE      T +  P    ++ ++ P  +++  ++W  P
Sbjct: 1379 LKPFTSYKFRVKATNDIGDSEFSEESEPLTTLQAAPDEAPTIVSVTPHTTTSVLIRWQPP 1438

Query: 528  --EQPNGVLMGYKIKYQSV------------------KGTKVGPLLERLPYISDPTTTSA 567
              ++ NG+L+G++I+Y+ +                  + T++  L   +  +S P+ T  
Sbjct: 1439 AEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGARWTELTSLFS-MRNLSRPSLTQY 1497

Query: 568  KLAGLEPSTKYRIHLAGYTKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISW 622
            +L  L    +Y I +  Y   G+G  S  + +F    VP   P NV   G T   L ++W
Sbjct: 1498 ELDNLNKHRRYEIRMTVYNAVGEGPLSAPQEVFVGEAVPTMAPRNVAVHGPTATQLDVTW 1557

Query: 623  TAMPEIEHNA 632
               P    N 
Sbjct: 1558 EPPPLESQNG 1567



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 56/143 (39%), Gaps = 30/143 (20%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N   +    A +  V+W P   +S  G  +GYK                  N 
Sbjct: 1535 VPTMAPRNVA-VHGPTATQLDVTWEPPPLESQNGDIQGYK------------------NL 1575

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
               TT  V            V AFN A  GP S      T +  P    S++   L +++
Sbjct: 1576 TGYTTYMVS-----------VAAFNAAGEGPRSTPTRGQTQQAAPSAPSSVKFSELTTTS 1624

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNGVL GY++ Y+
Sbjct: 1625 VNVSWEAPQFPNGVLEGYRLVYE 1647


>gi|45384050|ref|NP_990484.1| neuronal-glial cell adhesion molecule precursor [Gallus gallus]
 gi|1171701|sp|Q03696.2|NGCA_CHICK RecName: Full=Neuronal-glial cell adhesion molecule; Short=Ng-CAM;
           Flags: Precursor
 gi|509767|emb|CAA40290.1| Ng-CAM (neuron-glia cell adhesion melecule) [Gallus gallus]
          Length = 1266

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 196/717 (27%), Positives = 305/717 (42%), Gaps = 54/717 (7%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           +ALR   V L CI  G P P   W +   P+ P      GN+ K+L +  V  SD G Y 
Sbjct: 249 IALRGGSVVLECIAEGLPTPWVRWRRLNGPLLPG---GVGNFNKTLRLWGVTESDDGEYE 305

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   NG G A+  +  ++V AAPY+   P+       ET   +C+  G P P+I W  NG
Sbjct: 306 CVAENGRGTARG-THSVTVEAAPYWVRRPQSGVFGPGETARLDCEVGGKPRPQIQWSING 364

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            PI  A    RR +    + +  LR +D+    C A N  G +  + +++V+     +  
Sbjct: 365 VPIEAAGAE-RRWLRGGALVLPELRPNDSAVLQCEARNRHGPLLANAFLHVVELPLRMLT 423

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A +  Y  V+ +TV L CR FGAP P V W+    E  L   R  +   G L+++ V   
Sbjct: 424 ADEQRYEVVENQTVFLHCRTFGAPAPNVEWLTPTLEPALQDDRSFVFTNGSLRVSAVRGG 483

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D G YTC A+N       +  L V+  T I+  P     + G++ TF C A  DP++   
Sbjct: 484 DGGVYTCMAQNAHSNGSLTALLEVRAPTRISAPPRSATAKKGETVTFHCGATFDPAVTPG 543

Query: 341 -IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            + WLRG +P+    +PR+  S    +TV+     D G   CRA T LD  EA+A L  +
Sbjct: 544 ELRWLRGGQPL--PDDPRY--SVAAEMTVSNVDYGDEGTIQCRASTPLDSAEAEAQL--R 597

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQS--LRGHFRGYKVQTWTEKDGEGSIRELIV 457
           V    PS    +  +D  +  +SW P    +  +       + +    + G G+      
Sbjct: 598 VVGRPPSRDLQVMEVDEHRVRLSWTPGDDHNSPIEKFVVEEEEEREDLQRGFGAADV--- 654

Query: 458 NKGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEI-ISFVTPEGVPGTVQSLEA 512
             G+  T  +    P  +   RV+A N    G ++ P + I      PE  PG V   E 
Sbjct: 655 -PGQPWTPPL-PLSPYGRFPFRVVAVNAYGRGEHHAPSAPIETPPAAPERNPGGVHG-EG 711

Query: 513 IPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK---L 569
              G+     + + P+  N     Y+++++ ++    G      P+    +T  A    +
Sbjct: 712 NETGNLVITWEPLPPQAWNAPWARYRVQWRPLEEPGGGGPSGGFPWAE--STVDAPPVVV 769

Query: 570 AGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEGRGSTPNNLVISWTA 624
            GL P + ++I +     AG G E+          +P   P+NV       + + + WT 
Sbjct: 770 GGLPPFSPFQIRVQAVNGAGKGPEATPGVGHSGEDLPLVYPENVGVELLNSSTVRVRWT- 828

Query: 625 MPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTE 684
              +       + R+   R           VL WR   +   ++    P   ++ Q+  E
Sbjct: 829 ---LGGGPKELRGRLRGFR-----------VLYWRLGWVGERSRRQAPPDPPQIPQSPAE 874

Query: 685 KDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                    L V  G++    +    P S+   RVL FNG  +GPPSE I+F TPEG
Sbjct: 875 DPPPFPPVALTVG-GDARGALLGGLRPWSRYQLRVLVFNGRGDGPPSEPIAFETPEG 930



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 90/207 (43%), Gaps = 33/207 (15%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWN-PVSPQSLRGHFRGYKVQTWTEK-DGEGSIREL-- 455
            +PL  P N   ++++++    V W     P+ LRG  RG++V  W     GE S R+   
Sbjct: 805  LPLVYPENVG-VELLNSSTVRVRWTLGGGPKELRGRLRGFRVLYWRLGWVGERSRRQAPP 863

Query: 456  --------------------IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
                                +   G++    +    P S+   RVL FNG  +GPPSE I
Sbjct: 864  DPPQIPQSPAEDPPPFPPVALTVGGDARGALLGGLRPWSRYQLRVLVFNGRGDGPPSEPI 923

Query: 496  SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
            +F TPEGVPG  + L    L  +A  +  V+       + GY ++YQ V   + G  L  
Sbjct: 924  AFETPEGVPGPPEELRVERLDDTALSV--VERRTFKRSITGYVLRYQQV---EPGSALPG 978

Query: 556  LPYISDPTTTSAKLAGLEPSTKYRIHL 582
               + DP      L GL   ++YR+ L
Sbjct: 979  GSVLRDP---QCDLRGLNARSRYRLAL 1002



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 76/183 (41%), Gaps = 18/183 (9%)

Query: 236 VVLTCRVFGAPKPEVNWIHNQK----ELTGGRYTILETGDLKI-TDVAFADSGEYTCFAR 290
           +VL C   G P  +  W    +    E  GG   +  +G L I   +A    G + CFA 
Sbjct: 54  IVLKCVATGNPPVQYRWSREDQPFVPEEHGGVSVVPGSGTLVINATLAARLQGRFRCFAT 113

Query: 291 NKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
           N LGTA    +  + E+T     ++    EVE G      C+   + ++   I WL  S+
Sbjct: 114 NALGTAVSPEANVIAENTPQWPKEKVTPVEVEEGDPVVLPCDP-PESAVPPKIYWLN-SD 171

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSG-QYTCRAQTELDFIEAQATLTVQVPLE---A 404
            +    + R     D +L  + +   DS   Y C A     F+  + T+  + PL+   A
Sbjct: 172 IVHIAQDERVSMGQDGNLYFSNAMVGDSHPDYICHAH----FLGPR-TIIQKEPLDLRVA 226

Query: 405 PSN 407
           PSN
Sbjct: 227 PSN 229


>gi|297490638|ref|XP_002698210.1| PREDICTED: protein sidekick-1 [Bos taurus]
 gi|296473045|tpg|DAA15160.1| TPA: sidekick homolog 1, cell adhesion molecule (chicken) [Bos
           taurus]
          Length = 2194

 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 186/624 (29%), Positives = 271/624 (43%), Gaps = 42/624 (6%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
           + V   + +  L CI    P  +    W ++GV      R++ G   +G+ L I +   S
Sbjct: 208 RSVVAGSSETTLECIANARPAEELSVTWKRNGV------RVTTGLHGFGRRLTISNPTSS 261

Query: 98  DQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPE 154
           D G Y CE +      E       LS++  PYF  EP+  I A  EE V   C+A G+P 
Sbjct: 262 DTGVYICEAALPGSAFEPARARAFLSIIEPPYFIAEPKSRILAEVEENVDIVCEAMGVPP 321

Query: 155 PEIHWVHNGKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P + W  +   I++   NPR +V     + +  LR  D+G + C A+N+ G V    Y++
Sbjct: 322 PALQWFKDAISINKLQ-NPRYQVLAGGGLRVRQLRPEDSGIFQCLASNAGGEVQTHTYLD 380

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V   AP  T+ P D    DG T VL C V GAP+P + W      L  G     R+ +LE
Sbjct: 381 VTNVAPAFTQLPVDTTVTDGTTAVLRCEVSGAPRPAIVWSRGSHILASGSVRIPRFMLLE 440

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L+I  V+  D+G YTC A N  G+   S +LTV   T I   PED  V  G +AT  
Sbjct: 441 SGGLQIAPVSIQDAGSYTCHAANSEGSLDASATLTVWNRTSIVTPPEDLVVIKGTTATLH 500

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A  DP + L  VW + +  I   S  R V   D SL ++++   D G YTC   +E  
Sbjct: 501 CGATHDPRISLRYVWKKDNVVIAPSSSSRVVVEKDGSLLISQTWSGDIGDYTCGVISEGG 560

Query: 389 FIEAQATLTVQVPLEAPSNFTL-IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
                A L V     +P N    +    +   V+SW  V P         Y V+  +E +
Sbjct: 561 NDSRTARLEVIELPHSPQNLVASLNPAHSHAVVLSW--VRPFDGNSPVLYYIVEL-SENN 617

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGV 503
               +    V   E T   V    PA     RV A N    G Y+   S ++    P   
Sbjct: 618 SPWKVHLSDVGP-EMTGVTVRGLTPARTYQFRVCAVNQVGKGQYSAETSRLMLPEEPPSA 676

Query: 504 PGTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
           P   +++ A    + +  ++W  P +P  NGVL GY ++Y+ + G   G   +R   IS 
Sbjct: 677 PP--KNIVASGRTNQSIMVQWQPPPEPEHNGVLRGYILRYR-LAGLP-GEYQQR--NISS 730

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEGRGSTPN 616
           P  +   +  L   T+Y I +A Y  AG G  S+      L  VP   P NV+       
Sbjct: 731 PEVSYCLVTELIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQVEAVNST 790

Query: 617 NLVISWTAMPEIEHNAPHFKYRIF 640
            +   W   P+   N  +  Y++ 
Sbjct: 791 TIQFLWNPPPQQFINGINQGYKLL 814



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 168/665 (25%), Positives = 253/665 (38%), Gaps = 85/665 (12%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK-SYSID 119
           P PQ  W +DG  I PS RI+     + +I+          Y   V+   GE K S  + 
Sbjct: 125 PRPQVTWFRDGHKIIPSSRIAITLENQLVILAAAASDAGAYYVQAVNERNGENKTSPPVH 184

Query: 120 LSV--------LAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIH--WVHNGKPIS 167
           LS+          AP   V P    + A   ET T EC A+  P  E+   W  NG  ++
Sbjct: 185 LSIARDTGMPEAVAPVIVVPPSNRSVVAGSSET-TLECIANARPAEELSVTWKRNGVRVT 243

Query: 168 QAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT---NSLGYVYKDVYVNVLAHAPEITEA 224
                  R     R+TI N   SDTG Y C A    ++        +++++   P     
Sbjct: 244 TGLHGFGR-----RLTISNPTSSDTGVYICEAALPGSAFEPARARAFLSII-EPPYFIAE 297

Query: 225 PKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITDVAFA 280
           PK     +  + V + C   G P P + W  +     +L   RY +L  G L++  +   
Sbjct: 298 PKSRILAEVEENVDIVCEAMGVPPPALQWFKDAISINKLQNPRYQVLAGGGLRVRQLRPE 357

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKE-HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           DSG + C A N  G  Q    L V       T  P D  V  G +A  RC     P  + 
Sbjct: 358 DSGIFQCLASNAGGEVQTHTYLDVTNVAPAFTQLPVDTTVTDGTTAVLRCEVSGAP--RP 415

Query: 340 SIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +IVW RGS  +   S   PRF+      L +   S  D+G YTC A      ++A ATLT
Sbjct: 416 AIVWSRGSHILASGSVRIPRFMLLESGGLQIAPVSIQDAGSYTCHAANSEGSLDASATLT 475

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIV 457
           V        N T I        V+     +      H     ++   +KD       +++
Sbjct: 476 VW-------NRTSIVTPPEDLVVIKGTTATLHCGATHDPRISLRYVWKKD------NVVI 522

Query: 458 NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG-------------VP 504
               S+   V+K           L  +  ++G   +    V  EG             +P
Sbjct: 523 APSSSSRVVVEK--------DGSLLISQTWSGDIGDYTCGVISEGGNDSRTARLEVIELP 574

Query: 505 GTVQSLEAI--PLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERLPYISD 561
            + Q+L A   P  S A  L WV+P   N  ++ Y ++        KV        ++SD
Sbjct: 575 HSPQNLVASLNPAHSHAVVLSWVRPFDGNSPVLYYIVELSENNSPWKV--------HLSD 626

Query: 562 --PTTTSAKLAGLEPSTKYRIHLAGYTKAGDG---AESKYLFY---VPFKNPDNVEGRGS 613
             P  T   + GL P+  Y+  +    + G G   AE+  L      P   P N+   G 
Sbjct: 627 VGPEMTGVTVRGLTPARTYQFRVCAVNQVGKGQYSAETSRLMLPEEPPSAPPKNIVASGR 686

Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
           T  ++++ W   PE EHN     Y + +R       + Q ++     S  ++     +  
Sbjct: 687 TNQSIMVQWQPPPEPEHNGVLRGYILRYRLAGLPGEYQQRNISSPEVSYCLVTELIIWTQ 746

Query: 674 YEIKV 678
           YEI+V
Sbjct: 747 YEIQV 751



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 133/561 (23%), Positives = 204/561 (36%), Gaps = 49/561 (8%)

Query: 53  LFCIFGGTPLPQTIWSKDG-VPINPSDRISQGNYGKS--LIIKHVEFSDQGSYTCEVSNG 109
           L C   G P P  +WS+   +  + S RI +    +S  L I  V   D GSYTC  +N 
Sbjct: 405 LRCEVSGAPRPAIVWSRGSHILASGSVRIPRFMLLESGGLQIAPVSIQDAGSYTCHAANS 464

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G   + S  L+V         PE +   +  T T  C A+  P   + +V     +  A
Sbjct: 465 EGSLDA-SATLTVWNRTSIVTPPEDLVVIKGTTATLHCGATHDPRISLRYVWKKDNVVIA 523

Query: 170 PPNPRRKV--GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAPEITEAP 225
           P +  R V      + I      D G+Y C   +  G   +   + V  L H+P+   A 
Sbjct: 524 PSSSSRVVVEKDGSLLISQTWSGDIGDYTCGVISEGGNDSRTARLEVIELPHSPQNLVAS 583

Query: 226 KDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAF----- 279
            +        VVL+  R F    P + +I    E        L     ++T V       
Sbjct: 584 LNP--AHSHAVVLSWVRPFDGNSPVLYYIVELSENNSPWKVHLSDVGPEMTGVTVRGLTP 641

Query: 280 ADSGEYTCFARNKLGTAQGSGS---LTVKEHTHITDQPEDYEVEAG---QSATFRCNAVS 333
           A + ++   A N++G  Q S     L + E       P    V +G   QS   +     
Sbjct: 642 ARTYQFRVCAVNQVGKGQYSAETSRLMLPEEP--PSAPPKNIVASGRTNQSIMVQWQPPP 699

Query: 334 DPS---------LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           +P          L+  +  L G       S P         L +    E+    Y     
Sbjct: 700 EPEHNGVLRGYILRYRLAGLPGEYQQRNISSPEVSYCLVTELIIWTQYEIQVAAYNGAGL 759

Query: 385 TELDFIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW 443
               F  A    T+Q VP   P N   ++ +++      WNP   Q + G  +GYK+  W
Sbjct: 760 GV--FSRAVTEYTLQGVPTAPPQNVQ-VEAVNSTTIQFLWNPPPQQFINGINQGYKLLAW 816

Query: 444 TEKDGEG----SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
            +   E     +I            T + KF   +  F  VL F    +GPPS      T
Sbjct: 817 PDDVPEAVTVVTIAPDFHGVHHGYITNLKKF---TAYFTSVLCFTTPGDGPPSTPQLIRT 873

Query: 500 PEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
            E  PG V  L    +  ++  + W +P + NG++ GY++ ++       G    RL   
Sbjct: 874 HEDKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQVSWEV-----YGQSTSRLTLT 928

Query: 560 SDPTTTSAKLAGLEPSTKYRI 580
            + +T   K+ GL   T Y I
Sbjct: 929 LNSSTHEYKIQGLSSLTTYTI 949



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 2/142 (1%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P +AP     +  + A +  V+W P  P+S  G  +GYK+  W E D +    ++ V   
Sbjct: 1607 PAQAPQRVH-VNPLTASQLEVAWEPPPPESQNGIIQGYKIYYW-EADSQNDTEKMRVLFL 1664

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
              TT ++      +K    + AFN A +GP SE     T +  PGT   L    + S+  
Sbjct: 1665 PETTAKLKNLTSHTKYLVSISAFNAAGDGPRSEPQPGCTHQAAPGTPSFLAFSEITSTTL 1724

Query: 521  YLKWVKPEQPNGVLMGYKIKYQ 542
             + W +P   NGVL GY++ Y+
Sbjct: 1725 NVSWGEPVAANGVLQGYRVVYE 1746



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 127/328 (38%), Gaps = 33/328 (10%)

Query: 126 PYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
           PYF  EP       E   +   C A G    E  W HN   ++             +  I
Sbjct: 10  PYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWTHNDSELTT-------YTSEYKYVI 62

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RVF 243
            +L++ D G Y C   N +G + +      +A+  + T+A +     +G+  VL+   + 
Sbjct: 63  PSLQRLDAGFYRCVVRNRMGALLQRRSEVQVAYMGDFTDADERRVVSEGRAAVLSLPPIS 122

Query: 244 GAPKPEVNWIHN-QKELTGGRYTILETGDLKITDVAFADSGEYTCFA---RNKLGTAQGS 299
             P+P+V W  +  K +   R  I     L I   A +D+G Y   A   RN        
Sbjct: 123 SCPRPQVTWFRDGHKIIPSSRIAITLENQLVILAAAASDAGAYYVQAVNERNGENKTSPP 182

Query: 300 GSLTVKEHTHITDQ--------PEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEPI 350
             L++   T + +         P +  V AG S  T  C A + P+ +LS+ W R    +
Sbjct: 183 VHLSIARDTGMPEAVAPVIVVPPSNRSVVAGSSETTLECIANARPAEELSVTWKRNGVRV 242

Query: 351 DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ---TELDFIEAQATLTVQVP---LEA 404
                   +      LT++  +  D+G Y C A    +  +   A+A L++  P   +  
Sbjct: 243 TTG-----LHGFGRRLTISNPTSSDTGVYICEAALPGSAFEPARARAFLSIIEPPYFIAE 297

Query: 405 PSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           P +  L +V +    V     V P +L+
Sbjct: 298 PKSRILAEVEENVDIVCEAMGVPPPALQ 325



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 96/234 (41%), Gaps = 31/234 (13%)

Query: 388  DF-IEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV----- 440
            DF  E +A  T+Q VP E P + ++     +   ++ W P   +SL G  +GY++     
Sbjct: 1469 DFSAETEAVTTLQDVPGEPPRSVSVTPRTTSS-VLIQWQPPRDESLNGLLQGYRIYYREL 1527

Query: 441  --------QTWTEKDGEGSIRELIVNKG----ESTTTEVDKFVPASKNFARVLAFNGAYN 488
                    ++ T K       EL          S++TE    +   K + R      AYN
Sbjct: 1528 EYEAAPATESKTLKTPSALRAELTAQSSFKTVNSSSTETTYELTHLKKYRRYEVVLTAYN 1587

Query: 489  ----GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKY 541
                GP S  +     E  P    Q +   PL +S   + W    PE  NG++ GYKI Y
Sbjct: 1588 VIGEGPASAPVEVFVGEAAPAQAPQRVHVNPLTASQLEVAWEPPPPESQNGIIQGYKIYY 1647

Query: 542  QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK 595
                        E++  +  P TT AKL  L   TKY + ++ +  AGDG  S+
Sbjct: 1648 WEADSQND---TEKMRVLFLPETT-AKLKNLTSHTKYLVSISAFNAAGDGPRSE 1697



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 12/204 (5%)

Query: 397  TVQVPLE-APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIR 453
            T+Q P + AP++ T ++        + W P+      G+    GY+++ W        + 
Sbjct: 1074 TLQAPPDVAPTSIT-VRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWCPDLPSAVLT 1132

Query: 454  ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEA 512
            ++I ++ E   T V+     ++   ++ AFN    GP S  +   T E VP    +++ A
Sbjct: 1133 QVISDRLEREFT-VEGLEEWTEYELQMQAFNAIGAGPWSAAVRGRTRESVPSAAPENVSA 1191

Query: 513  IPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
              + S+   L W    +P  NG+++GYKI +++ K     P   R   +    T SA LA
Sbjct: 1192 EAVSSTQILLTWASVPEPDQNGLILGYKILFRA-KDLDPEP---RSHVVRGNHTQSALLA 1247

Query: 571  GLEPSTKYRIHLAGYTKAGDGAES 594
            GL     Y + +  +T+ G+G  S
Sbjct: 1248 GLGKFVLYELQVLAFTRIGNGVPS 1271



 Score = 46.6 bits (109), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 123/313 (39%), Gaps = 44/313 (14%)

Query: 394  ATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG 450
            +T++  VP E   APSN  +I  I  + A + + P       G+     +  W  +   G
Sbjct: 965  STISSGVPPELPGAPSNL-VISNISPRSATLQFRP-------GYDGKTAISRWIVQGQVG 1016

Query: 451  SI---RELIV-----NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 502
            +I    E +      N+ ++   E+    P +    R+   N    GP S+    +    
Sbjct: 1017 AIGDEEEWVTLCEEENEPDAQMLEIPDLTPYTHYRFRMRQANVVGAGPFSQSSRVIQTLQ 1076

Query: 503  VPGTVQ--SLEAIPLGSSAFYLKWVK-PE-QPNG--VLMGYKIKY-----QSVKGTKVGP 551
             P  V   S+       ++  L+WV  P+ Q NG    +GY+IKY      S   T+V  
Sbjct: 1077 APPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWCPDLPSAVLTQV-- 1134

Query: 552  LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF-----YVPFKNPD 606
                   ISD       + GLE  T+Y + +  +   G G  S  +       VP   P+
Sbjct: 1135 -------ISDRLEREFTVEGLEEWTEYELQMQAFNAIGAGPWSAAVRGRTRESVPSAAPE 1187

Query: 607  NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLA 666
            NV     +   ++++W ++PE + N     Y+I +R  +         V        +LA
Sbjct: 1188 NVSAEAVSSTQILLTWASVPEPDQNGLILGYKILFRAKDLDPEPRSHVVRGNHTQSALLA 1247

Query: 667  NQPTFQPYEIKVV 679
                F  YE++V+
Sbjct: 1248 GLGKFVLYELQVL 1260



 Score = 45.4 bits (106), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 21/200 (10%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V      G   GYK+  +  KD +   R  +V  
Sbjct: 1181 VPSAAPENVS-AEAVSSTQILLTWASVPEPDQNGLILGYKI-LFRAKDLDPEPRSHVVRG 1238

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGTVQSLEAIPLGSS 518
              + +  +           +VLAF    NG PS   I   T +  PG    L    +  +
Sbjct: 1239 NHTQSALLAGLGKFVLYELQVLAFTRIGNGVPSVPPILERTKDDAPGPPVRLVFPEVRLT 1298

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGT-------KVGPLLERLPYISDPTTTSAKLAG 571
            +  + W  PE+PNG+++GY+I Y+    +       +VG  + +         T+ +LA 
Sbjct: 1299 SVRIVWQPPEEPNGIILGYQIAYRLASSSPNTFTTVEVGATVRQF--------TATELA- 1349

Query: 572  LEPSTKYRIHLAGYTKAGDG 591
              P + Y   L+  T+ G G
Sbjct: 1350 --PESAYVFRLSAKTRQGWG 1367



 Score = 40.0 bits (92), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 114/300 (38%), Gaps = 70/300 (23%)

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGTV-QSLEAIPLGSS 518
            E+T   V++  P +    R+ A N   +   S E  +  T + VPG   +S+   P  +S
Sbjct: 1440 EATACVVERLRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPRSVSVTPRTTS 1499

Query: 519  AFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLE----RLPYI------------- 559
            +  ++W  P  E  NG+L GY+I Y+ ++  +  P  E    + P               
Sbjct: 1500 SVLIQWQPPRDESLNGLLQGYRIYYRELE-YEAAPATESKTLKTPSALRAELTAQSSFKT 1558

Query: 560  --SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYV----PFKNPDNVEGRG 612
              S  T T+ +L  L+   +Y + L  Y   G+G A +    +V    P + P  V    
Sbjct: 1559 VNSSSTETTYELTHLKKYRRYEVVLTAYNVIGEGPASAPVEVFVGEAAPAQAPQRVHVNP 1618

Query: 613  STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
             T + L ++W   P    N     Y+I++        W  D   D               
Sbjct: 1619 LTASQLEVAWEPPPPESQNGIIQGYKIYY--------WEADSQND--------------- 1655

Query: 673  PYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 732
                      TEK     +R L + +   TT ++      +K    + AFN A +GP SE
Sbjct: 1656 ----------TEK-----MRVLFLPE---TTAKLKNLTSHTKYLVSISAFNAAGDGPRSE 1697


>gi|358419039|ref|XP_003584107.1| PREDICTED: protein sidekick-1 [Bos taurus]
          Length = 2114

 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 186/624 (29%), Positives = 271/624 (43%), Gaps = 42/624 (6%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
           + V   + +  L CI    P  +    W ++GV      R++ G   +G+ L I +   S
Sbjct: 208 RSVVAGSSETTLECIANARPAEELSVTWKRNGV------RVTTGLHGFGRRLTISNPTSS 261

Query: 98  DQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPE 154
           D G Y CE +      E       LS++  PYF  EP+  I A  EE V   C+A G+P 
Sbjct: 262 DTGVYICEAALPGSAFEPARARAFLSIIEPPYFIAEPKSRILAEVEENVDIVCEAMGVPP 321

Query: 155 PEIHWVHNGKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P + W  +   I++   NPR +V     + +  LR  D+G + C A+N+ G V    Y++
Sbjct: 322 PALQWFKDAISINKLQ-NPRYQVLAGGGLRVRQLRPEDSGIFQCLASNAGGEVQTHTYLD 380

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V   AP  T+ P D    DG T VL C V GAP+P + W      L  G     R+ +LE
Sbjct: 381 VTNVAPAFTQLPVDTTVTDGTTAVLRCEVSGAPRPAIVWSRGSHILASGSVRIPRFMLLE 440

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L+I  V+  D+G YTC A N  G+   S +LTV   T I   PED  V  G +AT  
Sbjct: 441 SGGLQIAPVSIQDAGSYTCHAANSEGSLDASATLTVWNRTSIVTPPEDLVVIKGTTATLH 500

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A  DP + L  VW + +  I   S  R V   D SL ++++   D G YTC   +E  
Sbjct: 501 CGATHDPRISLRYVWKKDNVVIAPSSSSRVVVEKDGSLLISQTWSGDIGDYTCGVISEGG 560

Query: 389 FIEAQATLTVQVPLEAPSNFTL-IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
                A L V     +P N    +    +   V+SW  V P         Y V+  +E +
Sbjct: 561 NDSRTARLEVIELPHSPQNLVASLNPAHSHAVVLSW--VRPFDGNSPVLYYIVEL-SENN 617

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGV 503
               +    V   E T   V    PA     RV A N    G Y+   S ++    P   
Sbjct: 618 SPWKVHLSDVGP-EMTGVTVRGLTPARTYQFRVCAVNQVGKGQYSAETSRLMLPEEPPSA 676

Query: 504 PGTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
           P   +++ A    + +  ++W  P +P  NGVL GY ++Y+ + G   G   +R   IS 
Sbjct: 677 PP--KNIVASGRTNQSIMVQWQPPPEPEHNGVLRGYILRYR-LAGLP-GEYQQR--NISS 730

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEGRGSTPN 616
           P  +   +  L   T+Y I +A Y  AG G  S+      L  VP   P NV+       
Sbjct: 731 PEVSYCLVTELIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQVEAVNST 790

Query: 617 NLVISWTAMPEIEHNAPHFKYRIF 640
            +   W   P+   N  +  Y++ 
Sbjct: 791 TIQFLWNPPPQQFINGINQGYKLL 814



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 167/668 (25%), Positives = 252/668 (37%), Gaps = 91/668 (13%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK-SYSID 119
           P PQ  W +DG  I PS RI+     + +I+          Y   V+   GE K S  + 
Sbjct: 125 PRPQVTWFRDGHKIIPSSRIAITLENQLVILAAAASDAGAYYVQAVNERNGENKTSPPVH 184

Query: 120 LSV--------LAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIH--WVHNGKPIS 167
           LS+          AP   V P    + A   ET T EC A+  P  E+   W  NG  ++
Sbjct: 185 LSIARDTGMPEAVAPVIVVPPSNRSVVAGSSET-TLECIANARPAEELSVTWKRNGVRVT 243

Query: 168 QAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT---NSLGYVYKDVYVNVLAHAPEITEA 224
                  R     R+TI N   SDTG Y C A    ++        +++++   P     
Sbjct: 244 TGLHGFGR-----RLTISNPTSSDTGVYICEAALPGSAFEPARARAFLSII-EPPYFIAE 297

Query: 225 PKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITDVAFA 280
           PK     +  + V + C   G P P + W  +     +L   RY +L  G L++  +   
Sbjct: 298 PKSRILAEVEENVDIVCEAMGVPPPALQWFKDAISINKLQNPRYQVLAGGGLRVRQLRPE 357

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKE-HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           DSG + C A N  G  Q    L V       T  P D  V  G +A  RC     P  + 
Sbjct: 358 DSGIFQCLASNAGGEVQTHTYLDVTNVAPAFTQLPVDTTVTDGTTAVLRCEVSGAP--RP 415

Query: 340 SIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +IVW RGS  +   S   PRF+      L +   S  D+G YTC A      ++A ATLT
Sbjct: 416 AIVWSRGSHILASGSVRIPRFMLLESGGLQIAPVSIQDAGSYTCHAANSEGSLDASATLT 475

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIV 457
           V        N T I        V+     +      H     ++   +KD       +++
Sbjct: 476 VW-------NRTSIVTPPEDLVVIKGTTATLHCGATHDPRISLRYVWKKD------NVVI 522

Query: 458 NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG-------------VP 504
               S+   V+K           L  +  ++G   +    V  EG             +P
Sbjct: 523 APSSSSRVVVEK--------DGSLLISQTWSGDIGDYTCGVISEGGNDSRTARLEVIELP 574

Query: 505 GTVQSLEAI--PLGSSAFYLKWVKPEQPNGVLMGYKIKYQ------SVKGTKVGPLLERL 556
            + Q+L A   P  S A  L WV+P   N  ++ Y ++         V  + VGP +   
Sbjct: 575 HSPQNLVASLNPAHSHAVVLSWVRPFDGNSPVLYYIVELSENNSPWKVHLSDVGPEM--- 631

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG---AESKYLFY---VPFKNPDNVEG 610
                   T   + GL P+  Y+  +    + G G   AE+  L      P   P N+  
Sbjct: 632 --------TGVTVRGLTPARTYQFRVCAVNQVGKGQYSAETSRLMLPEEPPSAPPKNIVA 683

Query: 611 RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT 670
            G T  ++++ W   PE EHN     Y + +R       + Q ++     S  ++     
Sbjct: 684 SGRTNQSIMVQWQPPPEPEHNGVLRGYILRYRLAGLPGEYQQRNISSPEVSYCLVTELII 743

Query: 671 FQPYEIKV 678
           +  YEI+V
Sbjct: 744 WTQYEIQV 751



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 133/561 (23%), Positives = 204/561 (36%), Gaps = 49/561 (8%)

Query: 53  LFCIFGGTPLPQTIWSKDG-VPINPSDRISQGNYGKS--LIIKHVEFSDQGSYTCEVSNG 109
           L C   G P P  +WS+   +  + S RI +    +S  L I  V   D GSYTC  +N 
Sbjct: 405 LRCEVSGAPRPAIVWSRGSHILASGSVRIPRFMLLESGGLQIAPVSIQDAGSYTCHAANS 464

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G   + S  L+V         PE +   +  T T  C A+  P   + +V     +  A
Sbjct: 465 EGSLDA-SATLTVWNRTSIVTPPEDLVVIKGTTATLHCGATHDPRISLRYVWKKDNVVIA 523

Query: 170 PPNPRRKV--GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAPEITEAP 225
           P +  R V      + I      D G+Y C   +  G   +   + V  L H+P+   A 
Sbjct: 524 PSSSSRVVVEKDGSLLISQTWSGDIGDYTCGVISEGGNDSRTARLEVIELPHSPQNLVAS 583

Query: 226 KDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAF----- 279
            +        VVL+  R F    P + +I    E        L     ++T V       
Sbjct: 584 LNP--AHSHAVVLSWVRPFDGNSPVLYYIVELSENNSPWKVHLSDVGPEMTGVTVRGLTP 641

Query: 280 ADSGEYTCFARNKLGTAQGSGS---LTVKEHTHITDQPEDYEVEAG---QSATFRCNAVS 333
           A + ++   A N++G  Q S     L + E       P    V +G   QS   +     
Sbjct: 642 ARTYQFRVCAVNQVGKGQYSAETSRLMLPEEP--PSAPPKNIVASGRTNQSIMVQWQPPP 699

Query: 334 DPS---------LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           +P          L+  +  L G       S P         L +    E+    Y     
Sbjct: 700 EPEHNGVLRGYILRYRLAGLPGEYQQRNISSPEVSYCLVTELIIWTQYEIQVAAYNGAGL 759

Query: 385 TELDFIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW 443
               F  A    T+Q VP   P N   ++ +++      WNP   Q + G  +GYK+  W
Sbjct: 760 GV--FSRAVTEYTLQGVPTAPPQNVQ-VEAVNSTTIQFLWNPPPQQFINGINQGYKLLAW 816

Query: 444 TEKDGEG----SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
            +   E     +I            T + KF   +  F  VL F    +GPPS      T
Sbjct: 817 PDDVPEAVTVVTIAPDFHGVHHGYITNLKKF---TAYFTSVLCFTTPGDGPPSTPQLIRT 873

Query: 500 PEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
            E  PG V  L    +  ++  + W +P + NG++ GY++ ++       G    RL   
Sbjct: 874 HEDKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQVSWEV-----YGQSTSRLTLT 928

Query: 560 SDPTTTSAKLAGLEPSTKYRI 580
            + +T   K+ GL   T Y I
Sbjct: 929 LNSSTHEYKIQGLSSLTTYTI 949



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 2/142 (1%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P +AP     +  + A +  V+W P  P+S  G  +GYK+  W E D +    ++ V   
Sbjct: 1607 PAQAPQRVH-VNPLTASQLEVAWEPPPPESQNGIIQGYKIYYW-EADSQNDTEKMRVLFL 1664

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
              TT ++      +K    + AFN A +GP SE     T +  PGT   L    + S+  
Sbjct: 1665 PETTAKLKNLTSHTKYLVSISAFNAAGDGPRSEPQPGCTHQAAPGTPSFLAFSEITSTTL 1724

Query: 521  YLKWVKPEQPNGVLMGYKIKYQ 542
             + W +P   NGVL GY++ Y+
Sbjct: 1725 NVSWGEPVAANGVLQGYRVVYE 1746



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 127/328 (38%), Gaps = 33/328 (10%)

Query: 126 PYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
           PYF  EP       E   +   C A G    E  W HN   ++             +  I
Sbjct: 10  PYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWTHNDSELTT-------YTSEYKYVI 62

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RVF 243
            +L++ D G Y C   N +G + +      +A+  + T+A +     +G+  VL+   + 
Sbjct: 63  PSLQRLDAGFYRCVVRNRMGALLQRRSEVQVAYMGDFTDADERRVVSEGRAAVLSLPPIS 122

Query: 244 GAPKPEVNWIHN-QKELTGGRYTILETGDLKITDVAFADSGEYTCFA---RNKLGTAQGS 299
             P+P+V W  +  K +   R  I     L I   A +D+G Y   A   RN        
Sbjct: 123 SCPRPQVTWFRDGHKIIPSSRIAITLENQLVILAAAASDAGAYYVQAVNERNGENKTSPP 182

Query: 300 GSLTVKEHTHITDQ--------PEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEPI 350
             L++   T + +         P +  V AG S  T  C A + P+ +LS+ W R    +
Sbjct: 183 VHLSIARDTGMPEAVAPVIVVPPSNRSVVAGSSETTLECIANARPAEELSVTWKRNGVRV 242

Query: 351 DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ---TELDFIEAQATLTVQVP---LEA 404
                   +      LT++  +  D+G Y C A    +  +   A+A L++  P   +  
Sbjct: 243 TTG-----LHGFGRRLTISNPTSSDTGVYICEAALPGSAFEPARARAFLSIIEPPYFIAE 297

Query: 405 PSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           P +  L +V +    V     V P +L+
Sbjct: 298 PKSRILAEVEENVDIVCEAMGVPPPALQ 325



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 95/234 (40%), Gaps = 31/234 (13%)

Query: 388  DF-IEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV----- 440
            DF  E +A  T+Q VP E P + ++     +    V W P   +SL G  +GY++     
Sbjct: 1469 DFSAETEAVTTLQDVPGEPPRSVSVTPRTTSS-VRVQWQPPRDESLNGLLQGYRIYYREL 1527

Query: 441  --------QTWTEKDGEGSIRELIVNKG----ESTTTEVDKFVPASKNFARVLAFNGAYN 488
                    ++ T K       EL          S++TE    +   K + R      AYN
Sbjct: 1528 EYEAAPATESKTLKTPSALRAELTAQSSFKTVNSSSTETTYELTHLKKYRRYEVVLTAYN 1587

Query: 489  ----GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKY 541
                GP S  +     E  P    Q +   PL +S   + W    PE  NG++ GYKI Y
Sbjct: 1588 VIGEGPASAPVEVFVGEAAPAQAPQRVHVNPLTASQLEVAWEPPPPESQNGIIQGYKIYY 1647

Query: 542  QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK 595
                        E++  +  P TT AKL  L   TKY + ++ +  AGDG  S+
Sbjct: 1648 WEADSQND---TEKMRVLFLPETT-AKLKNLTSHTKYLVSISAFNAAGDGPRSE 1697



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 12/204 (5%)

Query: 397  TVQVPLE-APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIR 453
            T+Q P + AP++ T ++        + W P+      G+    GY+++ W        + 
Sbjct: 1074 TLQAPPDVAPTSIT-VRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWCPDLPSAVLT 1132

Query: 454  ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEA 512
            ++I ++ E   T V+     ++   ++ AFN    GP S  +   T E VP    +++ A
Sbjct: 1133 QVISDRLEREFT-VEGLEEWTEYELQMQAFNAIGAGPWSAAVRGRTRESVPSAAPENVSA 1191

Query: 513  IPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
              + S+   L W    +P  NG+++GYKI +++ K     P   R   +    T SA LA
Sbjct: 1192 EAVSSTQILLTWASVPEPDQNGLILGYKILFRA-KDLDPEP---RSHVVRGNHTQSALLA 1247

Query: 571  GLEPSTKYRIHLAGYTKAGDGAES 594
            GL     Y + +  +T+ G+G  S
Sbjct: 1248 GLGKFVLYELQVLAFTRIGNGVPS 1271



 Score = 47.0 bits (110), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 123/313 (39%), Gaps = 44/313 (14%)

Query: 394  ATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG 450
            +T++  VP E   APSN  +I  I  + A + + P       G+     +  W  +   G
Sbjct: 965  STISSGVPPELPGAPSNL-VISNISPRSATLQFRP-------GYDGKTAISRWIVQGQVG 1016

Query: 451  SI---RELIV-----NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 502
            +I    E +      N+ ++   E+    P +    R+   N    GP S+    +    
Sbjct: 1017 AIGDEEEWVTLCEEENEPDAQMLEIPDLTPYTHYRFRMRQANVVGAGPFSQSSRVIQTLQ 1076

Query: 503  VPGTVQ--SLEAIPLGSSAFYLKWVK-PE-QPNG--VLMGYKIKY-----QSVKGTKVGP 551
             P  V   S+       ++  L+WV  P+ Q NG    +GY+IKY      S   T+V  
Sbjct: 1077 APPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWCPDLPSAVLTQV-- 1134

Query: 552  LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF-----YVPFKNPD 606
                   ISD       + GLE  T+Y + +  +   G G  S  +       VP   P+
Sbjct: 1135 -------ISDRLEREFTVEGLEEWTEYELQMQAFNAIGAGPWSAAVRGRTRESVPSAAPE 1187

Query: 607  NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLA 666
            NV     +   ++++W ++PE + N     Y+I +R  +         V        +LA
Sbjct: 1188 NVSAEAVSSTQILLTWASVPEPDQNGLILGYKILFRAKDLDPEPRSHVVRGNHTQSALLA 1247

Query: 667  NQPTFQPYEIKVV 679
                F  YE++V+
Sbjct: 1248 GLGKFVLYELQVL 1260



 Score = 45.8 bits (107), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 29/204 (14%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V      G   GYK+  +  KD +   R  +V +
Sbjct: 1181 VPSAAPENVS-AEAVSSTQILLTWASVPEPDQNGLILGYKI-LFRAKDLDPEPRSHVV-R 1237

Query: 460  GESTTTEV----DKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGTVQSLEAIP 514
            G  T + +     KFV       +VLAF    NG PS   I   T +  PG    L    
Sbjct: 1238 GNHTQSALLAGLGKFVLYE---LQVLAFTRIGNGVPSVPPILERTKDDAPGPPVRLVFPE 1294

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-------KVGPLLERLPYISDPTTTSA 567
            +  ++  + W  PE+PNG+++GY+I Y+    +       +VG  + +         T+ 
Sbjct: 1295 VRLTSVRIVWQPPEEPNGIILGYQIAYRLASSSPNTFTTVEVGATVRQF--------TAT 1346

Query: 568  KLAGLEPSTKYRIHLAGYTKAGDG 591
            +LA   P + Y   L+  T+ G G
Sbjct: 1347 ELA---PESAYVFRLSAKTRQGWG 1367



 Score = 39.7 bits (91), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 114/300 (38%), Gaps = 70/300 (23%)

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGTV-QSLEAIPLGSS 518
            E+T   V++  P +    R+ A N   +   S E  +  T + VPG   +S+   P  +S
Sbjct: 1440 EATACVVERLRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPRSVSVTPRTTS 1499

Query: 519  AFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLE----RLPYI------------- 559
            +  ++W  P  E  NG+L GY+I Y+ ++  +  P  E    + P               
Sbjct: 1500 SVRVQWQPPRDESLNGLLQGYRIYYRELE-YEAAPATESKTLKTPSALRAELTAQSSFKT 1558

Query: 560  --SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYV----PFKNPDNVEGRG 612
              S  T T+ +L  L+   +Y + L  Y   G+G A +    +V    P + P  V    
Sbjct: 1559 VNSSSTETTYELTHLKKYRRYEVVLTAYNVIGEGPASAPVEVFVGEAAPAQAPQRVHVNP 1618

Query: 613  STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
             T + L ++W   P    N     Y+I++        W  D   D               
Sbjct: 1619 LTASQLEVAWEPPPPESQNGIIQGYKIYY--------WEADSQND--------------- 1655

Query: 673  PYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 732
                      TEK     +R L + +   TT ++      +K    + AFN A +GP SE
Sbjct: 1656 ----------TEK-----MRVLFLPE---TTAKLKNLTSHTKYLVSISAFNAAGDGPRSE 1697


>gi|410917814|ref|XP_003972381.1| PREDICTED: protein sidekick-1-like [Takifugu rubripes]
          Length = 2135

 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 175/606 (28%), Positives = 269/606 (44%), Gaps = 63/606 (10%)

Query: 67  WSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE--VSNGV---GEAKSYSIDLS 121
           W +DG  +N          G+ LII     SD G Y CE  +SN      EAK+Y   L+
Sbjct: 241 WKRDGRHLN---------SGRRLIIPTPSSSDTGLYVCEASLSNSTVRPAEAKAY---LT 288

Query: 122 VLAAPYFTVEPEF-INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGP- 179
           V+  P  +V+P+  I A  +  V   C A+G+P+P++ W  +   +S+   NPR KV   
Sbjct: 289 VIEPPTLSVQPQRKIFAELDRNVDIPCLATGVPQPKVEWFKDAVSLSKLA-NPRYKVAAA 347

Query: 180 NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLT 239
             +T+  ++  D G + C A ++ G  +    + V   AP  T  P D+   DG T + T
Sbjct: 348 TGLTVRRVQPGDGGIFQCLARSTAGETHAYTQLFVTGAAPTFTHPPSDQTVTDGNTALFT 407

Query: 240 CRVFGAPKPEVNWIH-NQKELTGG-----RYTILETGDLKITDVAFADSGEYTCFARNKL 293
           C+  G+PKP + W   N   L  G     R+T+L++G L+I  ++F DSG Y C A N  
Sbjct: 408 CQTSGSPKPAITWRKGNHTVLASGAVQVPRFTLLQSGGLQIQPISFQDSGAYMCIAFNSE 467

Query: 294 GTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFE 353
           G+   + +LT+   T I+  P D  V  G +AT  CNA  DP + +S  W RG +P+   
Sbjct: 468 GSINATATLTIMRRTVISVPPVDQRVIKGTTATLNCNATHDPRVIISFRWDRGGKPLLPT 527

Query: 354 SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTL-IQ 412
           S  R +     SLT+ ++   D G YTC   +        A L V     +P + T  + 
Sbjct: 528 SGGR-ISVRQSSLTIGQTWSGDIGDYTCTVTSAAGNDSCTARLEVIELPHSPRSLTAQLN 586

Query: 413 VIDAKKAVVSW-NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFV 471
             D++  ++SW  P    S   H+    V   +E +    +    V+    T   V    
Sbjct: 587 DSDSRSVLLSWLRPFDGNSPLLHY----VLELSENNSPWKVSLSEVDPA-VTEISVGGLT 641

Query: 472 PASKNFARVLAFN----GAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKP 527
           PA     R+ A N    G Y+G    ++    P   P   +++ A    + +  ++W  P
Sbjct: 642 PAKTYQFRLCAVNQVGRGQYSGETQRLMLREEPPSAPP--KNIVASGRTNQSIMVQWQPP 699

Query: 528 EQP--NGVLMGYKIKYQSVKGTKVGPLLERLP------YISDPTTTSAKLAGLEPSTKYR 579
            +P  NGVL GY ++Y+          L  LP       IS P T    L  L   T+Y+
Sbjct: 700 PEPQLNGVLRGYVLRYR----------LAGLPGDYQEKNISSPETNYCLLKDLIIWTQYQ 749

Query: 580 IHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPH 634
           I +A +T AG G+ S       L  VP   P  VE        +  +W+  P+   N  +
Sbjct: 750 IQVAAFTGAGLGSYSSPVTEYTLQGVPTAPPQEVEVVAINSTTIRFTWSPPPQQFINGIN 809

Query: 635 FKYRIF 640
             Y++ 
Sbjct: 810 QGYKLL 815



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 135/564 (23%), Positives = 223/564 (39%), Gaps = 56/564 (9%)

Query: 17  LNVIATGISASQNRHAPKQQYVT-----------RKKEVALRNKKVELFCIFGGTPLPQT 65
           L V    +S S  R A  + Y+T           ++K  A  ++ V++ C+  G P P+ 
Sbjct: 266 LYVCEASLSNSTVRPAEAKAYLTVIEPPTLSVQPQRKIFAELDRNVDIPCLATGVPQPKV 325

Query: 66  IWSKDGVPI----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLS 121
            W KD V +    NP  +++       L ++ V+  D G + C   +  GE  +Y+    
Sbjct: 326 EWFKDAVSLSKLANPRYKVAAAT---GLTVRRVQPGDGGIFQCLARSTAGETHAYTQLFV 382

Query: 122 VLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPI--SQAPPNPR-RKVG 178
             AAP FT  P      +  T  F C+ SG P+P I W      +  S A   PR   + 
Sbjct: 383 TGAAPTFTHPPSDQTVTDGNTALFTCQTSGSPKPAITWRKGNHTVLASGAVQVPRFTLLQ 442

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVL 238
              + I+ +   D+G Y C A NS G +     + ++     I+  P D+  + G T  L
Sbjct: 443 SGGLQIQPISFQDSGAYMCIAFNSEGSINATATLTIMRRT-VISVPPVDQRVIKGTTATL 501

Query: 239 TCRVFGAPKPEVN--WIHNQKEL---TGGRYTILETGDLKITDVAFADSGEYTCFARNKL 293
            C     P+  ++  W    K L   +GGR ++ ++  L I      D G+YTC   +  
Sbjct: 502 NCNATHDPRVIISFRWDRGGKPLLPTSGGRISVRQS-SLTIGQTWSGDIGDYTCTVTSAA 560

Query: 294 GTAQGSGSLTVKEHTH----ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEP 349
           G    +  L V E  H    +T Q  D +  +   +  R    + P L   +     + P
Sbjct: 561 GNDSCTARLEVIELPHSPRSLTAQLNDSDSRSVLLSWLRPFDGNSPLLHYVLELSENNSP 620

Query: 350 IDF---ESEPRFVQ--------SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
                 E +P   +        +  Y   +   +++  GQY+          E Q  +  
Sbjct: 621 WKVSLSEVDPAVTEISVGGLTPAKTYQFRLCAVNQVGRGQYSG---------ETQRLMLR 671

Query: 399 QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVN 458
           + P  AP    +      +  +V W P     L G  RGY V  +      G  +E  ++
Sbjct: 672 EEPPSAPPKNIVASGRTNQSIMVQWQPPPEPQLNGVLRGY-VLRYRLAGLPGDYQEKNIS 730

Query: 459 KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGS 517
             E+    +   +  ++   +V AF GA  G  S  ++  T +GVP    Q +E + + S
Sbjct: 731 SPETNYCLLKDLIIWTQYQIQVAAFTGAGLGSYSSPVTEYTLQGVPTAPPQEVEVVAINS 790

Query: 518 SAFYLKWVKPEQP--NGVLMGYKI 539
           +     W  P Q   NG+  GYK+
Sbjct: 791 TTIRFTWSPPPQQFINGINQGYKL 814



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 152/652 (23%), Positives = 244/652 (37%), Gaps = 65/652 (9%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV-GE-AKSYSI 118
           P P   W KDG  I P+ R +       L++     +D G Y  E  N + GE A S +I
Sbjct: 132 PRPLVTWYKDGQKIIPNTRTAI-TLDNQLVVLATVAADAGRYHVEAVNEMTGESATSPAI 190

Query: 119 DLSV--------LAAPYFTVEPEFINAAEEETVTFECKASG--LPEPEIHWVHNGKPISQ 168
            LS+        + AP   + P+          T EC A+   +    + W  +G+ ++ 
Sbjct: 191 YLSISGNNPGSEVQAPVIVIGPKDTTVVAGNQATLECVANARLVESLVVSWKRDGRHLNS 250

Query: 169 APPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVY---KDVYVNVLAHAPEITEAP 225
                       R+ I     SDTG Y C A+ S   V       Y+ V+   P ++  P
Sbjct: 251 G----------RRLIIPTPSSSDTGLYVCEASLSNSTVRPAEAKAYLTVI-EPPTLSVQP 299

Query: 226 KDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITDVAFAD 281
           + +   +  + V + C   G P+P+V W  +     +L   RY +     L +  V   D
Sbjct: 300 QRKIFAELDRNVDIPCLATGVPQPKVEWFKDAVSLSKLANPRYKVAAATGLTVRRVQPGD 359

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            G + C AR+  G       L V       T  P D  V  G +A F C     P  K +
Sbjct: 360 GGIFQCLARSTAGETHAYTQLFVTGAAPTFTHPPSDQTVTDGNTALFTCQTSGSP--KPA 417

Query: 341 IVWLRGSEPIDFESE---PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           I W +G+  +        PRF       L +   S  DSG Y C A      I A ATLT
Sbjct: 418 ITWRKGNHTVLASGAVQVPRFTLLQSGGLQIQPISFQDSGAYMCIAFNSEGSINATATLT 477

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHF---RGYKVQTWTEKDGEGSIRE 454
           +             +VI    A ++ N      +   F   RG K    T   G  S+R+
Sbjct: 478 IMRRTVISVPPVDQRVIKGTTATLNCNATHDPRVIISFRWDRGGKPLLPT-SGGRISVRQ 536

Query: 455 LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAI- 513
             +  G++ + ++  +     + A   +          E+I        P + +SL A  
Sbjct: 537 SSLTIGQTWSGDIGDYTCTVTSAAGNDSCTARL-----EVIEL------PHSPRSLTAQL 585

Query: 514 -PLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGL 572
               S +  L W++P   N  L+ Y ++           L E      DP  T   + GL
Sbjct: 586 NDSDSRSVLLSWLRPFDGNSPLLHYVLELSENNSPWKVSLSE-----VDPAVTEISVGGL 640

Query: 573 EPSTKYRIHLAGYTKAGDG---AESKYLFYV---PFKNPDNVEGRGSTPNNLVISWTAMP 626
            P+  Y+  L    + G G    E++ L      P   P N+   G T  ++++ W   P
Sbjct: 641 TPAKTYQFRLCAVNQVGRGQYSGETQRLMLREEPPSAPPKNIVASGRTNQSIMVQWQPPP 700

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           E + N     Y + +R       + + ++     +  +L +   +  Y+I+V
Sbjct: 701 EPQLNGVLRGYVLRYRLAGLPGDYQEKNISSPETNYCLLKDLIIWTQYQIQV 752



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 138/595 (23%), Positives = 228/595 (38%), Gaps = 57/595 (9%)

Query: 31  HAPKQQYVTRKKEVALRNKKVELF-CIFGGTPLPQTIWSKDGVPINPSDRISQGNY---- 85
           H P  Q VT        +    LF C   G+P P   W K    +  S  +    +    
Sbjct: 391 HPPSDQTVT--------DGNTALFTCQTSGSPKPAITWRKGNHTVLASGAVQVPRFTLLQ 442

Query: 86  GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTF 145
              L I+ + F D G+Y C   N  G   + +  L+++     +V P      +  T T 
Sbjct: 443 SGGLQIQPISFQDSGAYMCIAFNSEGSINA-TATLTIMRRTVISVPPVDQRVIKGTTATL 501

Query: 146 ECKASGLPEPEI--HWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSL 203
            C A+  P   I   W   GKP+       R  V  + +TI      D G+Y C  T++ 
Sbjct: 502 NCNATHDPRVIISFRWDRGGKPLLPTSGG-RISVRQSSLTIGQTWSGDIGDYTCTVTSAA 560

Query: 204 GYVYKDVYVNV--LAHAPEITEAPKDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELT 260
           G       + V  L H+P    A  ++   D ++V+L+  R F    P ++++    E  
Sbjct: 561 GNDSCTARLEVIELPHSPRSLTAQLNDS--DSRSVLLSWLRPFDGNSPLLHYVLELSENN 618

Query: 261 GGRYTILETGDLKITDVAF-----ADSGEYTCFARNKLGTAQGSGS---LTVKEHTHITD 312
                 L   D  +T+++      A + ++   A N++G  Q SG    L ++E    + 
Sbjct: 619 SPWKVSLSEVDPAVTEISVGGLTPAKTYQFRLCAVNQVGRGQYSGETQRLMLREEPP-SA 677

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG--------SEPIDFESEPRFVQSNDY 364
            P++       + +        P  +L+ V LRG          P D++ +       +Y
Sbjct: 678 PPKNIVASGRTNQSIMVQWQPPPEPQLNGV-LRGYVLRYRLAGLPGDYQEKNISSPETNY 736

Query: 365 SL----TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV 420
            L     +    ++    +T            + TL   VP   P    ++  I++    
Sbjct: 737 CLLKDLIIWTQYQIQVAAFTGAGLGSYSSPVTEYTLQ-GVPTAPPQEVEVV-AINSTTIR 794

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK--GESTTTEVDKFVPASKNFA 478
            +W+P   Q + G  +GYK+  W E   E  +   I     G   T  V      +  F 
Sbjct: 795 FTWSPPPQQFINGINQGYKLLVWPETYPEEMLVVTITPDYPGARHTGLVSGLKKFTWYFG 854

Query: 479 RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
            +L F    +GP S      T E  PG V  L    +  ++  + W +PE  NG++ GY+
Sbjct: 855 SILCFTTPGDGPRSLPTLLQTHEDTPGRVGHLSFTEILDTSLKVSWAEPEDKNGIVSGYE 914

Query: 539 IKYQ--SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           + ++   V+ T+    L         TT   +L GL  +T YRI +A  T AG G
Sbjct: 915 LWWEVSGVESTREERSLSN-------TTLQYQLTGLTSTTPYRIQVAALTAAGRG 962



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 22/209 (10%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPV-------SPQSLRGHFRGYKVQTWTEKDGEGSIR 453
            P   P N TL+          SW P+        P+++     GY+++ W   DG G  R
Sbjct: 1082 PDSYPFNLTLLSATQTSLQF-SWKPLPESEYNSDPETV-----GYRLRVW-RTDGRGEDR 1134

Query: 454  -ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVP-GTVQSLE 511
             E +   GE+  + V+   P ++   ++ A+N    GP S      T E VP G   ++ 
Sbjct: 1135 TEDVDGTGETGESTVEGLNPWTQYQVQIQAYNSIGPGPWSNTAHARTAESVPSGFPVNVT 1194

Query: 512  AIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKL 569
            A  +GS+   LKW  V   Q NGV++GYK+ Y   K +   P+ +         +TS  L
Sbjct: 1195 AEAVGSTKILLKWSAVPLHQKNGVVLGYKVMYNE-KDSDAAPVTQ---VAHGEGSTSVLL 1250

Query: 570  AGLEPSTKYRIHLAGYTKAGDGAESKYLF 598
             GL+    Y + +  +T+ GDG  S  + 
Sbjct: 1251 GGLQKYAVYELQVLAFTQMGDGPPSNPIL 1279



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 2/151 (1%)

Query: 392  AQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGS 451
            A A     VP   P N T  + + + K ++ W+ V      G   GYKV  + EKD + +
Sbjct: 1177 AHARTAESVPSGFPVNVT-AEAVGSTKILLKWSAVPLHQKNGVVLGYKVM-YNEKDSDAA 1234

Query: 452  IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLE 511
                + +   ST+  +      +    +VLAF    +GPPS  I   T E VPG    + 
Sbjct: 1235 PVTQVAHGEGSTSVLLGGLQKYAVYELQVLAFTQMGDGPPSNPILLRTKEDVPGPPVKMV 1294

Query: 512  AIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
               +  S+  + W  P  PNG+++GYKI Y+
Sbjct: 1295 FPEVRLSSVRVVWQPPTHPNGIILGYKISYR 1325



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 96/237 (40%), Gaps = 26/237 (10%)

Query: 181 RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC 240
           R+ +  L+++D G Y C A N +G V        +A     +   + +  + G+  V++ 
Sbjct: 66  RLFMPLLKRTDAGLYRCIARNRMGAVLDHRTEVQVAFQGNFSAEEQRKTVMQGRAAVISQ 125

Query: 241 RVFGA-PKPEVNWIHN-QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKL-GTAQ 297
               + P+P V W  + QK +   R  I     L +     AD+G Y   A N++ G + 
Sbjct: 126 PTLASFPRPLVTWYKDGQKIIPNTRTAITLDNQLVVLATVAADAGRYHVEAVNEMTGESA 185

Query: 298 GSGSLTVK----------EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS 347
            S ++ +           +   I   P+D  V AG  AT  C A +     L + W R  
Sbjct: 186 TSPAIYLSISGNNPGSEVQAPVIVIGPKDTTVVAGNQATLECVANARLVESLVVSWKR-- 243

Query: 348 EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI---EAQATLTVQVP 401
                  + R + S    +  T SS  D+G Y C A      +   EA+A LTV  P
Sbjct: 244 -------DGRHLNSGRRLIIPTPSSS-DTGLYVCEASLSNSTVRPAEAKAYLTVIEP 292



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/218 (21%), Positives = 89/218 (40%), Gaps = 25/218 (11%)

Query: 349  PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEA---- 404
            P++  +E     +N++S +V  +++ +    +  + TE +  + +     Q+ + +    
Sbjct: 1531 PVNTSTEAEVQAANNHSTSVLITTKSNFKTVSSASVTEFELTQLKKFRHYQIVMTSYNII 1590

Query: 405  ----PSNFTLIQVIDAKKAV----------------VSWNPVSPQSLRGHFRGYKVQTWT 444
                PS    + V +A  +V                V+WN    ++  G  +GYK+  W 
Sbjct: 1591 GESPPSTLAEVLVGEAAPSVAPQSIRVSAASPSSLEVTWNTPPLETQNGLIQGYKIHYW- 1649

Query: 445  EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVP 504
            E+D +    ++ V     T   +      +     + AFN A +GPPS+     T    P
Sbjct: 1650 ERDKQNQTEKVKVIFVPHTHVHLTNLTSYTPYLVTLTAFNTAGDGPPSDPRGGRTLPSAP 1709

Query: 505  GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
                 L+   L  ++  + W  P  PNG + GY++ YQ
Sbjct: 1710 SQPSYLDFSELTGTSVNVSWGAPVTPNGQVEGYRVTYQ 1747



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 93/232 (40%), Gaps = 36/232 (15%)

Query: 390  IEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYK-------VQT 442
            +E Q+  T+Q   + P    L++ I     +V W   +  S+ G   GY+       V T
Sbjct: 1475 VETQSVTTLQDVPDEPPVILLVKPITTTSVMVQWKRPNESSINGVLTGYRLYYRELPVNT 1534

Query: 443  WTEKDGEG----SIRELIVNKGESTT-----------TEVDKFVPASKNFARVL-AFNGA 486
             TE + +     S   LI  K    T           T++ KF    +++  V+ ++N  
Sbjct: 1535 STEAEVQAANNHSTSVLITTKSNFKTVSSASVTEFELTQLKKF----RHYQIVMTSYNII 1590

Query: 487  YNGPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKY-Q 542
               PPS +   +  E  P    QS+       S+  + W  P  E  NG++ GYKI Y +
Sbjct: 1591 GESPPSTLAEVLVGEAAPSVAPQSIRVSAASPSSLEVTWNTPPLETQNGLIQGYKIHYWE 1650

Query: 543  SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
              K  +     E++  I  P  T   L  L   T Y + L  +  AGDG  S
Sbjct: 1651 RDKQNQT----EKVKVIFVP-HTHVHLTNLTSYTPYLVTLTAFNTAGDGPPS 1697



 Score = 40.0 bits (92), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 54/251 (21%), Positives = 100/251 (39%), Gaps = 27/251 (10%)

Query: 463  TTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGTVQSLEAI-PLGSSAF 520
            TT  V+   P +    R+LA N   +   S E  S  T + VP     +  + P+ +++ 
Sbjct: 1445 TTWTVESLKPFTSYKFRMLATNDIGDSVFSVETQSVTTLQDVPDEPPVILLVKPITTTSV 1504

Query: 521  YLKWVKPEQP--NGVLMGYKIKY-------------QSVKGTKVGPLL---ERLPYISDP 562
             ++W +P +   NGVL GY++ Y             Q+        L+        +S  
Sbjct: 1505 MVQWKRPNESSINGVLTGYRLYYRELPVNTSTEAEVQAANNHSTSVLITTKSNFKTVSSA 1564

Query: 563  TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNN 617
            + T  +L  L+    Y+I +  Y   G+   S     +     P   P ++    ++P++
Sbjct: 1565 SVTEFELTQLKKFRHYQIVMTSYNIIGESPPSTLAEVLVGEAAPSVAPQSIRVSAASPSS 1624

Query: 618  LVISWTAMPEIEHNAPHFKYRI-FWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEI 676
            L ++W   P    N     Y+I +W R    +   +  V+    + + L N  ++ PY +
Sbjct: 1625 LEVTWNTPPLETQNGLIQGYKIHYWERDKQNQT-EKVKVIFVPHTHVHLTNLTSYTPYLV 1683

Query: 677  KVVQTWTEKDG 687
             +    T  DG
Sbjct: 1684 TLTAFNTAGDG 1694


>gi|348510471|ref|XP_003442769.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
           [Oreochromis niloticus]
          Length = 1348

 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 204/739 (27%), Positives = 311/739 (42%), Gaps = 98/739 (13%)

Query: 41  KKEVAL-RNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           K E+ L + + + L CI  G P PQ  W K G    PS ++   N+GK +I+   E  D 
Sbjct: 257 KSEIQLVKGEDLNLECIAEGFPTPQVEWKKMGHKF-PS-KVRFENHGKLVIVPRAEQEDS 314

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHW 159
           G+Y C+  N +GE + ++  ++V   P +  EPE   +     V  +C ASG+P+P   W
Sbjct: 315 GNYMCKAKNPLGEVQ-HTFTVTVEEPPEWVFEPESQLSMIGSDVHIKCSASGIPQPTTTW 373

Query: 160 VHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
             NG P+ ++P   RR +G + I I N + SD+  Y C A+N  G +  +  + ++   P
Sbjct: 374 RVNGGPLQESPARNRRVIG-DTIVIHNAQVSDSAVYQCEASNRHGTILSNANIMIMNLQP 432

Query: 220 EITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQ--KELTGGRYTILETGDLKITD 276
            I  +  +EY+V + K V + C+VF +P   + W  +   + + G R+T+ E G LKI +
Sbjct: 433 MILTSEGEEYSVVERKGVTMHCKVFSSPPSTITWSKDDSPESVHGPRFTVHENGSLKIYN 492

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
           V   D+G+YTC A+N  G++  +  L VK+ T I   PED  +  G +A   C A  D S
Sbjct: 493 VERGDTGQYTCLAKNTEGSSAINAMLYVKDPTRIVVAPEDQRILIGTTAQLSCLAEYDKS 552

Query: 337 LK--LSIVWLRGSEPI--DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
                 ++W +    I  ++    R+   N     +   S  D G Y C A+T  D   A
Sbjct: 553 FSNDFELLWEKDDMEIALNYTVNSRYFVENGV-FHIMNVSHSDQGVYRCVAKTPADQDVA 611

Query: 393 QATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSI 452
            A L V   L     F    V DA + +V          +G  R   ++     D   S 
Sbjct: 612 SALLMVLGELTCERCFCFGDVPDAPENLVL------SDRKG--RNVTLKWVPGDDHNSST 663

Query: 453 RELIVNKGE-----STTTEVDKFVPASKNFA------------RVLAFNGAYNGPPSEII 495
            E I+   E     S   E+ + VP ++N A            RV A N    G PSE  
Sbjct: 664 TEFIIEYEESHWEPSNWKELLR-VPGNRNSAELRLNGNVDYCFRVSAVNAVGTGRPSEAT 722

Query: 496 S-FVTPEGVPGTVQSLEAIPLGSSAFY---LKW--VKPEQPNGVLMGYKIKY--QSVKGT 547
             + TP   P   ++ E I +     +   +KW  + P + NG  + YK+ Y  Q V+  
Sbjct: 723 ERYKTPPEAPD--RNPENIRIEGHLPHEMDIKWEPLLPIEHNGPSLEYKVSYRRQDVEED 780

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF-----YVPF 602
                ++R  ++   T T            Y I +    + G G E K +        P 
Sbjct: 781 WKEHTVKRHSFVVRNTPTFV---------PYEIKIQAKNRQGFGPEPKLVTGYSGEDFPS 831

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
             PDNV  +    + + +SWT + + + +     YRI W                WR   
Sbjct: 832 AAPDNVAVKVMNSSVVKVSWTRVHKDKLHGHLGGYRISW----------------WRLRS 875

Query: 663 LVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAF 722
           LV                    K   G    L V  G+     V    P S+    V+ F
Sbjct: 876 LV------------------DSKKSPGDKHTLTV-PGDKNHATVPSLTPFSEYSLIVMTF 916

Query: 723 NGAYNGPPSEIISFVTPEG 741
           NG  NGP S  ++F TPEG
Sbjct: 917 NGRGNGPGSHPVNFKTPEG 935



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 95/200 (47%), Gaps = 11/200 (5%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW------TEKDGEGSIRE 454
            P  AP N   ++V+++    VSW  V    L GH  GY++  W        K   G    
Sbjct: 830  PSAAPDNVA-VKVMNSSVVKVSWTRVHKDKLHGHLGGYRISWWRLRSLVDSKKSPGDKHT 888

Query: 455  LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
            L V  G+     V    P S+    V+ FNG  NGP S  ++F TPEGVP          
Sbjct: 889  LTV-PGDKNHATVPSLTPFSEYSLIVMTFNGRGNGPGSHPVNFKTPEGVPEKNHDFRVTD 947

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLE 573
            +      L W  P +PNG+L+GY +KYQ +  T +VGPL  +   IS P TT+  L  LE
Sbjct: 948  VQRHTVSLAWKPPLEPNGILIGYLLKYQLINDTEEVGPL--QTVDISKPETTTWILRDLE 1005

Query: 574  PSTKYRIHLAGYTKAGDGAE 593
            P +KY+ +L   T  G G +
Sbjct: 1006 PLSKYKFYLCSCTAVGCGPD 1025



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 145/615 (23%), Positives = 247/615 (40%), Gaps = 72/615 (11%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQG 100
           + ++++    V + C   G P P T W  +G P+  S   ++   G +++I + + SD  
Sbjct: 347 ESQLSMIGSDVHIKCSASGIPQPTTTWRVNGGPLQESPARNRRVIGDTIVIHNAQVSDSA 406

Query: 101 SYTCEVSNGVGEAKSYS-IDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHW 159
            Y CE SN  G   S + I +  L     T E E  +  E + VT  CK    P   I W
Sbjct: 407 VYQCEASNRHGTILSNANIMIMNLQPMILTSEGEEYSVVERKGVTMHCKVFSSPPSTITW 466

Query: 160 VHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
             +  P  ++   PR  V  N  + I N+ + DTG Y C A N+ G    +  + V    
Sbjct: 467 SKDDSP--ESVHGPRFTVHENGSLKIYNVERGDTGQYTCLAKNTEGSSAINAMLYV-KDP 523

Query: 219 PEITEAPKDEYTVDGKTVVLTC-----RVFGAPKPEVNWIHNQKEL-----TGGRYTILE 268
             I  AP+D+  + G T  L+C     + F +   E+ W  +  E+        RY  +E
Sbjct: 524 TRIVVAPEDQRILIGTTAQLSCLAEYDKSF-SNDFELLWEKDDMEIALNYTVNSRY-FVE 581

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGS------GSLTVKE---HTHITDQPEDYEV 319
            G   I +V+ +D G Y C A+        S      G LT +       + D PE+  +
Sbjct: 582 NGVFHIMNVSHSDQGVYRCVAKTPADQDVASALLMVLGELTCERCFCFGDVPDAPENLVL 641

Query: 320 --EAGQSATFRCNAVSDPSLKLS--IVWLRGS--EPIDFE-----------SEPRFVQSN 362
               G++ T +     D +   +  I+    S  EP +++           +E R   + 
Sbjct: 642 SDRKGRNVTLKWVPGDDHNSSTTEFIIEYEESHWEPSNWKELLRVPGNRNSAELRLNGNV 701

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSN---FTLIQVIDAKKA 419
           DY   V+  + + +G+             ++AT   + P EAP        I+     + 
Sbjct: 702 DYCFRVSAVNAVGTGR------------PSEATERYKTPPEAPDRNPENIRIEGHLPHEM 749

Query: 420 VVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR 479
            + W P+ P    G    YKV ++  +D E   +E  V +          FVP      +
Sbjct: 750 DIKWEPLLPIEHNGPSLEYKV-SYRRQDVEEDWKEHTVKRHSFVVRNTPTFVPYE---IK 805

Query: 480 VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMG 536
           + A N    GP  ++++  + E  P       A+  + SS   + W  V  ++ +G L G
Sbjct: 806 IQAKNRQGFGPEPKLVTGYSGEDFPSAAPDNVAVKVMNSSVVKVSWTRVHKDKLHGHLGG 865

Query: 537 YKI---KYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
           Y+I   + +S+  +K  P  ++           A +  L P ++Y + +  +   G+G  
Sbjct: 866 YRISWWRLRSLVDSKKSP-GDKHTLTVPGDKNHATVPSLTPFSEYSLIVMTFNGRGNGPG 924

Query: 594 SKYLFYVPFKNPDNV 608
           S     V FK P+ V
Sbjct: 925 SH---PVNFKTPEGV 936



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 153/379 (40%), Gaps = 41/379 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINP---SDRISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           + C   G P P+  W+K+    +P      + + N G  +I  +   ++ QG+Y C  SN
Sbjct: 59  VICEAKGNPEPEFRWTKNDQEFDPFLDPRLMKEENSGTFVIPNNGNLTEYQGTYRCYASN 118

Query: 109 GVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECK-ASGLPEPEIHWVH-NG 163
            +G A S  I+  V   P F   T++P  +   E +  T +C   +G+P  +I+W+  N 
Sbjct: 119 KLGIAISKEIEFIVPNVPKFPKETLDPVVVE--EGQPFTLKCDPPNGIPPLQIYWMTINL 176

Query: 164 KPISQAPPNPRRKVGPNRITI--ENLRKSDTGNYGCNAT----------NSLGYVYK--- 208
           + I Q   + R  VG N        + K    +Y C A+           ++  + K   
Sbjct: 177 QHIEQ---DQRVSVGLNGDLYFSHAVEKDSRRDYCCFASFPRIRTIVQKTAMSVIVKTRK 233

Query: 209 -DVYVN---VLAHAPEITEAP--KDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG 261
            D   N   +L   P +   P  K E   V G+ + L C   G P P+V W     +   
Sbjct: 234 SDSSENANAILERKPSLLTPPGGKSEIQLVKGEDLNLECIAEGFPTPQVEWKKMGHKFP- 292

Query: 262 GRYTILETGDLKITDVAFA-DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
            +      G L I   A   DSG Y C A+N LG  Q + ++TV+E      +PE     
Sbjct: 293 SKVRFENHGKLVIVPRAEQEDSGNYMCKAKNPLGEVQHTFTVTVEEPPEWVFEPESQLSM 352

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
            G     +C+A   P  + +  W     P+  ES  R  +    ++ +  +   DS  Y 
Sbjct: 353 IGSDVHIKCSASGIP--QPTTTWRVNGGPLQ-ESPARNRRVIGDTIVIHNAQVSDSAVYQ 409

Query: 381 CRAQTELDFIEAQATLTVQ 399
           C A      I + A + + 
Sbjct: 410 CEASNRHGTILSNANIMIM 428



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 127/321 (39%), Gaps = 44/321 (13%)

Query: 118 IDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGK-------PISQ 168
           I L V+  P  T +     I    +E+    C+A G PEPE  W  N +       P   
Sbjct: 30  IPLEVVQLPTITAQSPSTLIAFPFDESFPVICEAKGNPEPEFRWTKNDQEFDPFLDPRLM 89

Query: 169 APPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
              N    V PN   +   +    G Y C A+N LG         ++ + P+  +   D 
Sbjct: 90  KEENSGTFVIPNNGNLTEYQ----GTYRCYASNKLGIAISKEIEFIVPNVPKFPKETLDP 145

Query: 229 YTV-DGKTVVLTCR-VFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS-G 283
             V +G+   L C    G P  ++ W  I+ Q      R ++   GDL  +     DS  
Sbjct: 146 VVVEEGQPFTLKCDPPNGIPPLQIYWMTINLQHIEQDQRVSVGLNGDLYFSHAVEKDSRR 205

Query: 284 EYTCFAR-NKLGTAQGSGSLTVKEHTHITDQPE--------------------DYEVEAG 322
           +Y CFA   ++ T     +++V   T  +D  E                    + ++  G
Sbjct: 206 DYCCFASFPRIRTIVQKTAMSVIVKTRKSDSSENANAILERKPSLLTPPGGKSEIQLVKG 265

Query: 323 QSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCR 382
           +     C A   P+ ++   W +      F S+ RF +++   + V ++ + DSG Y C+
Sbjct: 266 EDLNLECIAEGFPTPQVE--WKKMGH--KFPSKVRF-ENHGKLVIVPRAEQEDSGNYMCK 320

Query: 383 AQTELDFIEAQATLTVQVPLE 403
           A+  L  ++   T+TV+ P E
Sbjct: 321 AKNPLGEVQHTFTVTVEEPPE 341


>gi|301612220|ref|XP_002935618.1| PREDICTED: contactin-5-like [Xenopus (Silurana) tropicalis]
          Length = 1097

 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 167/607 (27%), Positives = 269/607 (44%), Gaps = 41/607 (6%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           A +   V++ C   G P+P   W K    I    R+ +      L I +V+  D G+Y C
Sbjct: 310 AAQGTTVKMECFALGNPVPTISWRKVSGFIPSKARLRKAQ--AVLEIPNVQLEDAGTYEC 367

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           +  N  G+  ++   L V   P +  +         + + +ECKA   P P   W+ NG 
Sbjct: 368 KAENSRGK-NAFRGQLQVYTQPQWIEKINDTQLDSGDQLRWECKAEAKPRPIYRWLKNGL 426

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--EIT 222
           P+    P  R ++    +TI N+ +SD G Y C A N  G +Y    + VLA AP  E++
Sbjct: 427 PLM---PQNRIEMVNGMLTIHNVNQSDAGMYQCLAENIYGIIYGSAELKVLASAPTFELS 483

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           +  K      GK VVL C+   +PKP ++W+  +K +    R  +L  G L+I + + +D
Sbjct: 484 QKQKTVVITKGKEVVLECKPSASPKPSISWMKGEKAVRQNKRVAVLPDGSLRILNASKSD 543

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G YTC   N  G A+   S+ V E T I   P+  E+  G+S    C A+ DP L +S 
Sbjct: 544 EGRYTCRGENIFGLAEIVASVFVTEPTKIELTPKRTELTVGESIVLSCKAIHDPLLDVSF 603

Query: 342 VWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W+   +P+ FE E         Q++   L +     + +G+Y CR QT  D +  +A +
Sbjct: 604 SWILNGQPVSFEKEDGHFESIRTQASSADLMIRNILLMHAGRYGCRVQTTADTVSDEAEV 663

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD-GEGSIREL 455
            V+ P   P    +++ I    A +SW+P +          Y +Q  +    G  +++ +
Sbjct: 664 LVRGP-PGPPGVVIVEEITESTATLSWSPGAEN--HSPILCYNLQARSPFSLGWQTVKTV 720

Query: 456 --IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLEA 512
             I+N GE  +  V    P  +   RV+A N    G PS     + T E VP T  +   
Sbjct: 721 PEIIN-GEMESAMVVDLNPWVEYEFRVVATNSIGTGDPSVPSRVIRTKEAVPKTPPA--N 777

Query: 513 IPLGSS---AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISDPTTT 565
           +  GS       + W  V  E  NG   GY + ++  + +G K     E++   SD +  
Sbjct: 778 VSGGSGRRHELVITWEPVSEEFQNGEGFGYIVAFRPNNTRGWK-----EKMVTSSDASKF 832

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNLVI 620
             +     P T + + +  Y   GDG  S  +F       P   P +V+G G + + +V+
Sbjct: 833 IYRDESTPPLTPFEVKVGVYNNKGDGPFSDIVFICSAEGEPTTAPADVKGTGLSASEIVV 892

Query: 621 SWTAMPE 627
           +W  M E
Sbjct: 893 AWKPMKE 899



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 166/663 (25%), Positives = 252/663 (38%), Gaps = 77/663 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I   + SD GSY C V N +   +  S        +  V+      +E  F     A
Sbjct: 251 NLYISKAQASDVGSYICLVKNPLTNTRVMSPPTPLTLRNDGVMGEYEPKIEVHFPYTFTA 310

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           A+  TV  EC A G P P I W      I   P   R +     + I N++  D G Y C
Sbjct: 311 AQGTTVKMECFALGNPVPTISWRKVSGFI---PSKARLRKAQAVLEIPNVQLEDAGTYEC 367

Query: 198 NATNSLGYVYKDVYVNVLA--HAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K+ +   L     P+  E   D     G  +   C+    P+P   W+ N
Sbjct: 368 KAENSRG---KNAFRGQLQVYTQPQWIEKINDTQLDSGDQLRWECKAEAKPRPIYRWLKN 424

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITD 312
              L       +  G L I +V  +D+G Y C A N  G   GS  L V        ++ 
Sbjct: 425 GLPLMPQNRIEMVNGMLTIHNVNQSDAGMYQCLAENIYGIIYGSAELKVLASAPTFELSQ 484

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
           + +   +  G+     C   + P  K SI W++G + +      R     D SL +  +S
Sbjct: 485 KQKTVVITKGKEVVLECKPSASP--KPSISWMKGEKAV--RQNKRVAVLPDGSLRILNAS 540

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI---QVIDAKKAV------ 420
           + D G+YTCR +      E  A++ V  P +    P    L     ++ + KA+      
Sbjct: 541 KSDEGRYTCRGENIFGLAEIVASVFVTEPTKIELTPKRTELTVGESIVLSCKAIHDPLLD 600

Query: 421 --VSW----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
              SW     PVS +   GHF   + Q       +  IR +++         V       
Sbjct: 601 VSFSWILNGQPVSFEKEDGHFESIRTQA---SSADLMIRNILLMHAGRYGCRVQTTADTV 657

Query: 475 KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
            + A VL       GPP          G PG V   E   +  S   L W    + +  +
Sbjct: 658 SDEAEVLV-----RGPP----------GPPGVVIVEE---ITESTATLSWSPGAENHSPI 699

Query: 535 MGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
           + Y ++ +S     +G   ++ +P I +    SA +  L P  +Y   +      G G  
Sbjct: 700 LCYNLQARS--PFSLGWQTVKTVPEIINGEMESAMVVDLNPWVEYEFRVVATNSIGTGDP 757

Query: 594 S------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTG 647
           S      +    VP   P NV G     + LVI+W  + E   N   F Y + +R +NT 
Sbjct: 758 SVPSRVIRTKEAVPKTPPANVSGGSGRRHELVITWEPVSEEFQNGEGFGYIVAFRPNNT- 816

Query: 648 EAWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIVN-KGESTTT 704
             W +  V     S+ +  ++  P   P+E+KV     + DG  S    I + +GE TT 
Sbjct: 817 RGWKEKMVTSSDASKFIYRDESTPPLTPFEVKVGVYNNKGDGPFSDIVFICSAEGEPTTA 876

Query: 705 EVD 707
             D
Sbjct: 877 PAD 879



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 104/440 (23%), Positives = 160/440 (36%), Gaps = 38/440 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV L C   G P P   W ++G  I+  +         + II    E  D G Y C  +
Sbjct: 115 KKVALNCEARGVPTPIYRWLRNGTEIDLENDYRYSMIDGNFIISSPNEMKDSGQYQCLAA 174

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N  G   S    L       F+      ++  E + V   C      PE    WV N  P
Sbjct: 175 NSFGSILSREATLQFAYLGNFSGRIRSAVSVREGQGVVLMCSPPHHSPELIYSWVFNEFP 234

Query: 166 ISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLG-----------YVYKDVYV 212
            S    + RR +      + I   + SD G+Y C   N L             +  D  +
Sbjct: 235 -SFVAEDSRRFISQQTGNLYISKAQASDVGSYICLVKNPLTNTRVMSPPTPLTLRNDGVM 293

Query: 213 NVLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD 271
               + P+I    P       G TV + C   G P P ++W      +            
Sbjct: 294 G--EYEPKIEVHFPYTFTAAQGTTVKMECFALGNPVPTISWRKVSGFIPSKARLRKAQAV 351

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
           L+I +V   D+G Y C A N  G     G L V       ++  D ++++G    + C A
Sbjct: 352 LEIPNVQLEDAGTYECKAENSRGKNAFRGQLQVYTQPQWIEKINDTQLDSGDQLRWECKA 411

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
            + P  +    WL+   P+  ++    V      LT+   ++ D+G Y C A+     I 
Sbjct: 412 EAKP--RPIYRWLKNGLPLMPQNRIEMVNG---MLTIHNVNQSDAGMYQCLAENIYGIIY 466

Query: 392 AQATLTVQVPLEAPSNFTLIQ------VIDAKKAVVSWNP-VSPQSLRGHFRGYKVQTWT 444
             A L V   L +   F L Q      +   K+ V+   P  SP+      +G K     
Sbjct: 467 GSAELKV---LASAPTFELSQKQKTVVITKGKEVVLECKPSASPKPSISWMKGEKAVRQN 523

Query: 445 EKDG---EGSIRELIVNKGE 461
           ++     +GS+R L  +K +
Sbjct: 524 KRVAVLPDGSLRILNASKSD 543



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 111/286 (38%), Gaps = 25/286 (8%)

Query: 119 DLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D SV   P F  EPE   F   + E+ V   C+A G+P P   W+ NG  I         
Sbjct: 90  DESVNYGPVFVQEPENIVFPMDSGEKKVALNCEARGVPTPIYRWLRNGTEIDLENDYRYS 149

Query: 176 KVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGK 234
            +  N I        D+G Y C A NS G +         A+    +   +   +V +G+
Sbjct: 150 MIDGNFIISSPNEMKDSGQYQCLAANSFGSILSREATLQFAYLGNFSGRIRSAVSVREGQ 209

Query: 235 TVVLTCR-VFGAPKPEVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFA 289
            VVL C     +P+   +W+ N+          R+   +TG+L I+    +D G Y C  
Sbjct: 210 GVVLMCSPPHHSPELIYSWVFNEFPSFVAEDSRRFISQQTGNLYISKAQASDVGSYICLV 269

Query: 290 RNKLG-----------TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
           +N L            T +  G +   E       P  +    G +    C A+ +P   
Sbjct: 270 KNPLTNTRVMSPPTPLTLRNDGVMGEYEPKIEVHFPYTFTAAQGTTVKMECFALGNPVPT 329

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           +S  W + S  I  ++  R  Q+    L +      D+G Y C+A+
Sbjct: 330 IS--WRKVSGFIPSKARLRKAQA---VLEIPNVQLEDAGTYECKAE 370



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 80/198 (40%), Gaps = 24/198 (12%)

Query: 32  APKQQYVTRKKEVAL-RNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLI 90
           AP  +   ++K V + + K+V L C    +P P   W K    +  + R++    G SL 
Sbjct: 477 APTFELSQKQKTVVITKGKEVVLECKPSASPKPSISWMKGEKAVRQNKRVAVLPDG-SLR 535

Query: 91  IKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEE-------ETV 143
           I +   SD+G YTC   N  G        L+ + A  F  EP  I    +       E++
Sbjct: 536 ILNASKSDEGRYTCRGENIFG--------LAEIVASVFVTEPTKIELTPKRTELTVGESI 587

Query: 144 TFECKASGLPEPEI--HWVHNGKPISQAPPNP-----RRKVGPNRITIENLRKSDTGNYG 196
              CKA   P  ++   W+ NG+P+S    +      R +     + I N+     G YG
Sbjct: 588 VLSCKAIHDPLLDVSFSWILNGQPVSFEKEDGHFESIRTQASSADLMIRNILLMHAGRYG 647

Query: 197 CNATNSLGYVYKDVYVNV 214
           C    +   V  +  V V
Sbjct: 648 CRVQTTADTVSDEAEVLV 665



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 68/183 (37%), Gaps = 10/183 (5%)

Query: 211 YVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL---TGGRYTIL 267
           Y  V    PE    P D      K V L C   G P P   W+ N  E+      RY+++
Sbjct: 95  YGPVFVQEPENIVFPMDS---GEKKVALNCEARGVPTPIYRWLRNGTEIDLENDYRYSMI 151

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQG-SGSLTVKEHTHITDQPED-YEVEAGQSA 325
           +   +  +     DSG+Y C A N  G+      +L      + + +      V  GQ  
Sbjct: 152 DGNFIISSPNEMKDSGQYQCLAANSFGSILSREATLQFAYLGNFSGRIRSAVSVREGQGV 211

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEP-IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
              C+     S +L   W+    P    E   RF+     +L ++K+   D G Y C  +
Sbjct: 212 VLMCSPPHH-SPELIYSWVFNEFPSFVAEDSRRFISQQTGNLYISKAQASDVGSYICLVK 270

Query: 385 TEL 387
             L
Sbjct: 271 NPL 273



 Score = 45.1 bits (105), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 21/184 (11%)

Query: 420 VVSWNPVSPQSLRGHFRGYKV-------QTWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
           V++W PVS +   G   GY V       + W EK    S     + + EST        P
Sbjct: 789 VITWEPVSEEFQNGEGFGYIVAFRPNNTRGWKEKMVTSSDASKFIYRDESTP-------P 841

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQPN 531
            +    +V  +N   +GP S+I+   + EG P T  + ++   L +S   + W KP + N
Sbjct: 842 LTPFEVKVGVYNNKGDGPFSDIVFICSAEGEPTTAPADVKGTGLSASEIVVAW-KPMKEN 900

Query: 532 -GVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGD 590
            G  +GY++ Y   K  +     E++    +   +S  L  L+ +T Y I +  Y KAG 
Sbjct: 901 LGKSLGYEVSYW--KDMEQEEASEKVKTAGN--ESSVILTDLDGNTLYHITVRAYNKAGY 956

Query: 591 GAES 594
           G  S
Sbjct: 957 GPPS 960


>gi|440913028|gb|ELR62536.1| Protein sidekick-1, partial [Bos grunniens mutus]
          Length = 2033

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 187/630 (29%), Positives = 269/630 (42%), Gaps = 46/630 (7%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
           + V   + +  L CI    P  +    W ++GV      R++ G   +G+ L I +   S
Sbjct: 203 RSVVAGSSETTLECIANARPAEELSVTWKRNGV------RVTTGLHGFGRRLTISNPTSS 256

Query: 98  DQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPE 154
           D G Y CE +      E       LS++  PYFT EP+  I A  EE V   C+A G+P 
Sbjct: 257 DTGVYVCEAALPGSAFEPARARAFLSIIEPPYFTAEPKSRILAEVEENVDIVCEAMGVPP 316

Query: 155 PEIHWVHNGKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P + W  +   I++   NPR +V     + +  LR  D+G + C A+N+ G V    Y++
Sbjct: 317 PALQWFKDAISINKLQ-NPRYQVLAGGGLRVRQLRPEDSGIFQCLASNAGGEVQTHTYLD 375

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V   AP  T+ P D    DG T VL C V GAP+P + W      L  G     R+ +LE
Sbjct: 376 VTNVAPAFTQLPVDTTVTDGTTAVLRCEVSGAPRPAIVWSRGSHILASGSVRIPRFMLLE 435

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L+I  V+  D+G YTC A N  G+   S  LTV   T I   PED  V  G +AT  
Sbjct: 436 SGGLQIAPVSIQDAGSYTCHAANSEGSLDASAMLTVWNRTSIVTPPEDLVVIKGTTATLH 495

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A  DP + L  VW + +  I   S  R V   D SL ++++   D G YTC   +E  
Sbjct: 496 CGATHDPRISLRYVWKKDNVVIAPSSSSRVVVEKDGSLLISQTWSGDIGDYTCGVISEGG 555

Query: 389 FIEAQATLTVQVPLEAPSNFTL-IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
                A L V     +P N    +    +   V+SW  V P         Y V+  +E +
Sbjct: 556 NDSRTARLEVIELPHSPQNLVASLNPAHSHAVVLSW--VRPFDGNSPVLYYIVEL-SENN 612

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGV 503
               +    V   E T   V    PA     RV A N    G Y+   S ++    P   
Sbjct: 613 SPWKVHLSDVGP-EMTGVTVRGLTPARTYQFRVCAVNQVGKGQYSAETSRLMLPEEPPSA 671

Query: 504 PGTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLP---- 557
           P   +++ A    + +  ++W  P +P  NGVL GY ++  +  G      L  LP    
Sbjct: 672 PP--KNIVASGRTNQSIMVQWQPPPEPEHNGVLRGYILRQVAAPGHAY--RLAGLPGEYQ 727

Query: 558 --YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEG 610
              IS P  +   +  L   T+Y I +A Y  AG G  S+      L  VP   P NV+ 
Sbjct: 728 QRNISSPEVSYCLVTELIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQV 787

Query: 611 RGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
                  +   W   P+   N  +  Y++ 
Sbjct: 788 EAVNSTTIQFLWNPPPQQFINGINQGYKLL 817



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 160/618 (25%), Positives = 236/618 (38%), Gaps = 85/618 (13%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK-SYSID 119
           P PQ  W +DG  I PS RI+     + +I+          Y   V+   GE K S  + 
Sbjct: 120 PRPQVTWFRDGHKIIPSSRIAITLENQLVILAAAASDAGAYYVQAVNERNGENKTSPPVH 179

Query: 120 LSV--------LAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIH--WVHNGKPIS 167
           LS+          AP   V P    + A   ET T EC A+  P  E+   W  NG  ++
Sbjct: 180 LSIARDTGMPEAVAPIIVVPPSNRSVVAGSSET-TLECIANARPAEELSVTWKRNGVRVT 238

Query: 168 QAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT---NSLGYVYKDVYVNVLAHAPEITEA 224
                  R     R+TI N   SDTG Y C A    ++        +++++   P  T  
Sbjct: 239 TGLHGFGR-----RLTISNPTSSDTGVYVCEAALPGSAFEPARARAFLSII-EPPYFTAE 292

Query: 225 PKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITDVAFA 280
           PK     +  + V + C   G P P + W  +     +L   RY +L  G L++  +   
Sbjct: 293 PKSRILAEVEENVDIVCEAMGVPPPALQWFKDAISINKLQNPRYQVLAGGGLRVRQLRPE 352

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKE-HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           DSG + C A N  G  Q    L V       T  P D  V  G +A  RC     P  + 
Sbjct: 353 DSGIFQCLASNAGGEVQTHTYLDVTNVAPAFTQLPVDTTVTDGTTAVLRCEVSGAP--RP 410

Query: 340 SIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +IVW RGS  +   S   PRF+      L +   S  D+G YTC A      ++A A LT
Sbjct: 411 AIVWSRGSHILASGSVRIPRFMLLESGGLQIAPVSIQDAGSYTCHAANSEGSLDASAMLT 470

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIV 457
           V        N T I        V+     +      H     ++   +KD       +++
Sbjct: 471 VW-------NRTSIVTPPEDLVVIKGTTATLHCGATHDPRISLRYVWKKD------NVVI 517

Query: 458 NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG-------------VP 504
               S+   V+K           L  +  ++G   +    V  EG             +P
Sbjct: 518 APSSSSRVVVEK--------DGSLLISQTWSGDIGDYTCGVISEGGNDSRTARLEVIELP 569

Query: 505 GTVQSLEAI--PLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERLPYISD 561
            + Q+L A   P  S A  L WV+P   N  ++ Y ++        KV        ++SD
Sbjct: 570 HSPQNLVASLNPAHSHAVVLSWVRPFDGNSPVLYYIVELSENNSPWKV--------HLSD 621

Query: 562 --PTTTSAKLAGLEPSTKYRIHLAGYTKAGDG---AESKYLFY---VPFKNPDNVEGRGS 613
             P  T   + GL P+  Y+  +    + G G   AE+  L      P   P N+   G 
Sbjct: 622 VGPEMTGVTVRGLTPARTYQFRVCAVNQVGKGQYSAETSRLMLPEEPPSAPPKNIVASGR 681

Query: 614 TPNNLVISWTAMPEIEHN 631
           T  ++++ W   PE EHN
Sbjct: 682 TNQSIMVQWQPPPEPEHN 699



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 130/569 (22%), Positives = 203/569 (35%), Gaps = 57/569 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDG-VPINPSDRISQGNYGKS--LIIKHVEFSDQGSYTCEVSNG 109
           L C   G P P  +WS+   +  + S RI +    +S  L I  V   D GSYTC  +N 
Sbjct: 400 LRCEVSGAPRPAIVWSRGSHILASGSVRIPRFMLLESGGLQIAPVSIQDAGSYTCHAANS 459

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G   + ++ L+V         PE +   +  T T  C A+  P   + +V     +  A
Sbjct: 460 EGSLDASAM-LTVWNRTSIVTPPEDLVVIKGTTATLHCGATHDPRISLRYVWKKDNVVIA 518

Query: 170 PPNPRRKV--GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAPEITEAP 225
           P +  R V      + I      D G+Y C   +  G   +   + V  L H+P+   A 
Sbjct: 519 PSSSSRVVVEKDGSLLISQTWSGDIGDYTCGVISEGGNDSRTARLEVIELPHSPQNLVAS 578

Query: 226 KDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAF----- 279
            +        VVL+  R F    P + +I    E        L     ++T V       
Sbjct: 579 LNP--AHSHAVVLSWVRPFDGNSPVLYYIVELSENNSPWKVHLSDVGPEMTGVTVRGLTP 636

Query: 280 ADSGEYTCFARNKLGTAQGSGSLT---------------------VKEHTHITDQPEDYE 318
           A + ++   A N++G  Q S   +                       +   +  QP    
Sbjct: 637 ARTYQFRVCAVNQVGKGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPEP 696

Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQ 378
              G    +    V+ P     +  L G       S P         L +    E+    
Sbjct: 697 EHNGVLRGYILRQVAAPGHAYRLAGLPGEYQQRNISSPEVSYCLVTELIIWTQYEIQVAA 756

Query: 379 YTCRAQTELDFIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRG 437
           Y         F  A    T+Q VP   P N   ++ +++      WNP   Q + G  +G
Sbjct: 757 YNGAGLGV--FSRAVTEYTLQGVPTAPPQNVQ-VEAVNSTTIQFLWNPPPQQFINGINQG 813

Query: 438 YKVQTWTEKDGEGSIRELI------VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
           YK+  W +   E      I      V+ G    T + KF   +  F  VL F    +GPP
Sbjct: 814 YKLLAWPDDVPEAVTVVTIAPDFHGVHHG--YITNLKKF---TAYFTSVLCFTTPGDGPP 868

Query: 492 SEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP 551
           S      T E  PG V  L    +  ++  + W +P + NG++ GY++ ++       G 
Sbjct: 869 STPQLIWTHEDKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQVSWEV-----YGQ 923

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRI 580
              RL    + +T   K+ GL   T Y I
Sbjct: 924 STSRLTLTLNSSTHEYKIQGLSSLTTYTI 952



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 105/273 (38%), Gaps = 27/273 (9%)

Query: 126 PYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
           PYF  EP       E   +   C A G    E  W HN   ++             +  I
Sbjct: 5   PYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWTHNDSELTT-------YTSEYKYVI 57

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RVF 243
            +L++ D G Y C   N +G + +      +A+  + T+A +     +G+  VL+   + 
Sbjct: 58  PSLQRLDAGFYRCVVRNRMGALLQRRSEVQVAYMGDFTDADERRVVSEGRAAVLSLPPIS 117

Query: 244 GAPKPEVNWIHN-QKELTGGRYTILETGDLKITDVAFADSGEYTCFA---RNKLGTAQGS 299
             P+P+V W  +  K +   R  I     L I   A +D+G Y   A   RN        
Sbjct: 118 SCPRPQVTWFRDGHKIIPSSRIAITLENQLVILAAAASDAGAYYVQAVNERNGENKTSPP 177

Query: 300 GSLTVKEHTHITDQ--------PEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEPI 350
             L++   T + +         P +  V AG S  T  C A + P+ +LS+ W R    +
Sbjct: 178 VHLSIARDTGMPEAVAPIIVVPPSNRSVVAGSSETTLECIANARPAEELSVTWKRNGVRV 237

Query: 351 DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
                   +      LT++  +  D+G Y C A
Sbjct: 238 TTG-----LHGFGRRLTISNPTSSDTGVYVCEA 265



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 12/204 (5%)

Query: 397  TVQVPLE-APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIR 453
            T+Q P + AP++ T ++        + W P+      G+    GY+++ W        + 
Sbjct: 1077 TLQAPPDVAPTSIT-VRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRLDLPSAVLT 1135

Query: 454  ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEA 512
            ++I ++ E   T V+     ++   ++ AFN    GP S  +   T E VP    +++ A
Sbjct: 1136 QVISDRLEREFT-VEGLEEWTEYELQMQAFNAIGAGPWSAAVRGRTRESVPSAAPENVSA 1194

Query: 513  IPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
              + S+   L W    +P  NG+++GYKI +++ K     P   R   +    T SA LA
Sbjct: 1195 EAVSSTQILLTWASVPEPDQNGLILGYKILFRA-KDLDPEP---RSHVVRGNHTQSALLA 1250

Query: 571  GLEPSTKYRIHLAGYTKAGDGAES 594
            GL     Y + +  +T+ G+G  S
Sbjct: 1251 GLGKFVLYELQVLAFTRIGNGVPS 1274



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 45/98 (45%)

Query: 445  EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVP 504
            E D +    ++ V     TT ++      +K    + AFN A +GP SE     T +  P
Sbjct: 1649 EADSQNDTEKMRVLFLPETTAKLKNLTSHTKYLVSISAFNAAGDGPRSEPQPGCTHQAAP 1708

Query: 505  GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
            GT   L    + S+   + W +P   NGVL GY++ Y+
Sbjct: 1709 GTPSFLAFSEITSTTLNVSWGEPVAANGVLQGYRVVYE 1746



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 122/308 (39%), Gaps = 34/308 (11%)

Query: 394  ATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG 450
            +T++  VP E   APSN  +I  I  + A + + P       G+     +  W  +   G
Sbjct: 968  STISSGVPPELPGAPSNL-VISNISPRSATLQFRP-------GYDGKTAISRWIVQGQVG 1019

Query: 451  SI---RELIV-----NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 502
            +I    E +      N+ ++   E+    P +    R+   N    GP S+    +    
Sbjct: 1020 AIGDEEEWVTLCEEENEPDAQMLEIPDLTPYTHYRFRMRQANVVGAGPFSQSSRVIQTLQ 1079

Query: 503  VPGTVQ--SLEAIPLGSSAFYLKWVK--PEQPNG--VLMGYKIKYQSVKGTKVGPLLERL 556
             P  V   S+       ++  L+WV     Q NG    +GY+IKY  +       +L ++
Sbjct: 1080 APPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRLDLPSA--VLTQV 1137

Query: 557  PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF-----YVPFKNPDNVEGR 611
              ISD       + GLE  T+Y + +  +   G G  S  +       VP   P+NV   
Sbjct: 1138 --ISDRLEREFTVEGLEEWTEYELQMQAFNAIGAGPWSAAVRGRTRESVPSAAPENVSAE 1195

Query: 612  GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
              +   ++++W ++PE + N     Y+I +R  +         V        +LA    F
Sbjct: 1196 AVSSTQILLTWASVPEPDQNGLILGYKILFRAKDLDPEPRSHVVRGNHTQSALLAGLGKF 1255

Query: 672  QPYEIKVV 679
              YE++V+
Sbjct: 1256 VLYELQVL 1263



 Score = 45.8 bits (107), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 21/200 (10%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V      G   GYK+  +  KD +   R  +V  
Sbjct: 1184 VPSAAPENVS-AEAVSSTQILLTWASVPEPDQNGLILGYKI-LFRAKDLDPEPRSHVVRG 1241

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGTVQSLEAIPLGSS 518
              + +  +           +VLAF    NG PS   I   T +  PG    L    +  +
Sbjct: 1242 NHTQSALLAGLGKFVLYELQVLAFTRIGNGVPSVPPILERTKDDAPGPPVRLVFPEVRLT 1301

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGT-------KVGPLLERLPYISDPTTTSAKLAG 571
            +  + W  PE+PNG+++GY+I Y+    +       +VG  + +         T+ +LA 
Sbjct: 1302 SVRIVWQPPEEPNGIILGYQIAYRLASSSPNTFTTVEVGATVRQF--------TATELA- 1352

Query: 572  LEPSTKYRIHLAGYTKAGDG 591
              P + Y   L+  T+ G G
Sbjct: 1353 --PESAYVFRLSAKTRQGWG 1370


>gi|297701681|ref|XP_002827834.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-2 [Pongo abelii]
          Length = 2177

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 168/570 (29%), Positives = 245/570 (42%), Gaps = 27/570 (4%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V     +V L C+    PL +   IW KDGV +  S  IS  N  + L I +   S
Sbjct: 246 KNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGVLL--SGGISDHN--RRLTIPNPTGS 301

Query: 98  DQGSYTCEVSNGVGEAKSY--SIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPE 154
           + G Y CE         S      LSVL  P F  EPE  I A  E+ V   C+A G+P 
Sbjct: 302 NAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQFVKEPERHITAEMEKVVDIPCRAKGVPP 361

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
           P I W  +   +        R+     + I  L   DTG + C A N+ G V    Y+ V
Sbjct: 362 PSITWYKDAAVVEVEKLARFRQRSDGGLQISGLLPDDTGMFQCFARNAAGEVQTSTYLAV 421

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILET 269
            + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T LE+
Sbjct: 422 TSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLES 481

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+  C
Sbjct: 482 GSLLISPTHISDAGTYTCLATNSRGVDEXSADLVVWARTRITKPPQDQSVIKGTQASMVC 541

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
               DP + +  +W +    +  ES PR     + SL ++++   D G YTCR  +    
Sbjct: 542 GVTHDPRVTIRYIWEKDGATLGTESHPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGN 601

Query: 390 IEAQATLTVQVPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
               A L V+    AP +    +  ++ +   ++W    P         Y ++  +E + 
Sbjct: 602 DSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWT--KPFDGNSPLIRYVLEM-SENNA 658

Query: 449 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ 508
             ++    V+  ++T+  V   VPA     R+ A N    G  S+    V+    P T  
Sbjct: 659 PWTVLLASVDP-KATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAP 717

Query: 509 SLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT 564
               I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I+D   
Sbjct: 718 PQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRY-CLAGLPVG---YQFKNITDADV 773

Query: 565 TSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            +  L  L   T Y I +A Y  AG G  S
Sbjct: 774 NNLLLEDLIIWTNYEIEVAAYNSAGLGVYS 803



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 176/684 (25%), Positives = 270/684 (39%), Gaps = 75/684 (10%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K Q V+  +   +R  ++  F      P PQ  W +DG  I PS RI+      +L+I  
Sbjct: 144 KHQSVSHGEAAVIRAPRIASF------PQPQVTWFRDGRKIPPSSRIAI-TLENTLVILS 196

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFINAAEEET------- 142
               D G Y  + V++  G+ K S  I L+V  +  P   + P  I   +  +       
Sbjct: 197 TVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSE 256

Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
           VT EC A+  P  ++H  W  +G  +S    +  R     R+TI N   S+ G Y C A 
Sbjct: 257 VTLECVANARPLIKLHIIWKKDGVLLSGGISDHNR-----RLTIPNPTGSNAGYYECEAV 311

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+  V +  Y++VL   P+  + P+   T + + VV + CR  G P P + W  + 
Sbjct: 312 LRSSSVPSVVRGAYLSVL-EPPQFVKEPERHITAEMEKVVDIPCRAKGVPPPSITWYKDA 370

Query: 257 KEL---TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHITD 312
             +      R+     G L+I+ +   D+G + CFARN  G  Q S  L V     +IT 
Sbjct: 371 AVVEVEKLARFRQRSDGGLQISGLLPDDTGMFQCFARNAAGEVQTSTYLAVTSIAPNITR 430

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTK 370
            P D  V  G S    C     P  + +I W +G   +   S   PRF      SL ++ 
Sbjct: 431 GPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTPLESGSLLISP 488

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAV-VSWNP- 425
           +   D+G YTC A       E  A L V       + P + ++I+   A     V+ +P 
Sbjct: 489 THISDAGTYTCLATNSRGVDEXSADLVVWARTRITKPPQDQSVIKGTQASMVCGVTHDPR 548

Query: 426 VSPQSL---RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV-- 480
           V+ + +    G   G +       D  GS+       G+  T    + + A  N +R   
Sbjct: 549 VTIRYIWEKDGATLGTESHPRIRLDRNGSLHISQTWSGDIGTYTC-RVISAGGNDSRSAH 607

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
           L      + P   + +  T E                 A  L W KP   N  L+ Y ++
Sbjct: 608 LRVRQLPHAPEHPVATLSTVE---------------RRAINLTWTKPFDGNSPLIRYVLE 652

Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV 600
             S        LL  +    DP  TS  + GL P+  Y+  L      G G  SK    V
Sbjct: 653 -MSENNAPWTVLLASV----DPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERV 707

Query: 601 ------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
                 P   P NV   G T  +++I W   PE   N     Y I +        +   +
Sbjct: 708 SLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKN 767

Query: 655 VLDWRQSELVLANQPTFQPYEIKV 678
           + D   + L+L +   +  YEI+V
Sbjct: 768 ITDADVNNLLLEDLIIWTNYEIEV 791



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N  ++    A +  V+W P    S  G  +GYK+  W  + G  + R   +  
Sbjct: 1627 VPTAAPRN-VVVHGATATQLDVTWEPPPLDSQNGDIQGYKIYFWEAQRGNLTERVKTLFL 1685

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E++  ++      +     V AFN A +GP S      T +  P    S++   L +++
Sbjct: 1686 AENSV-KLKNLTGYTAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSAPSSVKFSELTTTS 1744

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNG+L GY++ Y+
Sbjct: 1745 VNVSWEAPQFPNGILEGYRLVYE 1767



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 138/347 (39%), Gaps = 48/347 (13%)

Query: 379  YTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVID--AKKAVVSWNP----VSPQ 429
            +   AQT   + EA   L V         P +  ++Q  D  A+  ++SW P    +SP 
Sbjct: 1378 FRITAQTRKGWGEAAEALVVTTEKRDRPQPPSRPMVQQEDVRARSVLLSWEPGSDGLSP- 1436

Query: 430  SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
                  R Y +QT     G  ++    V+   S+   VD+  P +    RV A N   + 
Sbjct: 1437 -----VRYYTIQTRELPSGXWALHSASVSHNASSFI-VDRLKPFTSYKFRVKATNDIGDS 1490

Query: 490  PPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQ 542
              SE    +T     P+  P     L   P  +++  ++W  P  ++ NG+L+G++I+Y+
Sbjct: 1491 EFSEESESLTTLQAAPDEAPTI---LSVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYR 1547

Query: 543  SV--KGTKVGPL---------------LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
             +  +G +   L               +  +  +S P+ T  +L  L    +Y I ++ Y
Sbjct: 1548 ELLYEGLRGFTLRGINNPGATWAELTSMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVY 1607

Query: 586  TKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
               G+G  S  + +F    VP   P NV   G+T   L ++W   P    N     Y+I+
Sbjct: 1608 NAVGEGPSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQNGDIQGYKIY 1667

Query: 641  WRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDG 687
            +     G    +   L   ++ + L N   +  Y + V       DG
Sbjct: 1668 FWEAQRGNLTERVKTLFLAENSVKLKNLTGYTAYMVSVAAFNAAGDG 1714



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ V      G   GYKV  + EKD +   R  +V  
Sbjct: 1203 VPSSGPANVSALATTSSS-MLVRWSEVPEADRNGLVLGYKV-IYKEKDLDTQPRFWLVEG 1260

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1261 NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 1320

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P + Y
Sbjct: 1321 SVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVL----APSARQYTATGLKPESVY 1376

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1377 LFRITAQTRKGWGEAAEAL 1395



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/307 (22%), Positives = 127/307 (41%), Gaps = 48/307 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 963  LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGPPTNLGISN---------- 1008

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +   G + E    L++    N+ ++ + EV    P
Sbjct: 1009 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNP 1068

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 1069 FTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTA---SETSLWLRWMPL 1125

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY    G   G  L  +  + D       +  LE  T+YR+ + 
Sbjct: 1126 PEMEYNGNPESVGYKIKYSRSDGH--GKTLSHV--VQDRVEREYTIEDLEEWTEYRVQVQ 1181

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S+ +       VP   P NV    +T +++++ W+ +PE + N     Y+
Sbjct: 1182 AFNAIGSGPWSQTVVGRTRESVPSSGPANVSALATTSSSMLVRWSEVPEADRNGLVLGYK 1241

Query: 639  IFWRRHN 645
            + ++  +
Sbjct: 1242 VIYKEKD 1248



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 5/118 (4%)

Query: 477 FARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMG 536
           F  VL F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L G
Sbjct: 873 FTSVLCFTTPGDGPRSTPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTG 932

Query: 537 YKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           Y+I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 933 YRISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 985


>gi|109018711|ref|XP_001096628.1| PREDICTED: neurofascin isoform 1 [Macaca mulatta]
          Length = 1340

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/377 (33%), Positives = 190/377 (50%), Gaps = 18/377 (4%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 354 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 412

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 413 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 471

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   
Sbjct: 472 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 531

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 532 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 590

Query: 275 TDVAFADS---GEYTCFARNK-LGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN 330
             +          + C+A N+ + +A G  +    + T I   PED   + G +    C 
Sbjct: 591 EALRAGICHCVAAWGCWAENRPVASALGFST----DPTRIYRMPEDQVAKRGTTVQLECR 646

Query: 331 AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
              DPSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A TELD  
Sbjct: 647 VKHDPSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQD 703

Query: 391 EAQATLTVQVPLEAPSN 407
            A+A LTV      P+N
Sbjct: 704 LAKAYLTVLADQATPTN 720



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 20/221 (9%)

Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLK 523
           +TE+D+ +  +K +  VLA       P + + +   P+G P   + LE   L   +  L 
Sbjct: 697 STELDQDL--AKAYLTVLADQAT---PTNRLAAL--PKGRPDRPRDLELTDLAERSVRLT 749

Query: 524 WVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
           W+  +  N  +  Y ++++  +  + G   +   Y   P + ++ +  L P   Y+  + 
Sbjct: 750 WIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKY---PGSVNSAVLRLSPYVNYQFRVI 805

Query: 584 GYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKY 637
              + G    S      +     P  NP +V+G G+  NN+ I+WT M       P+ +Y
Sbjct: 806 AVNEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRY 865

Query: 638 RIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            + WRR  T EAWN  +V  W  S  V+   P + PYEI+V
Sbjct: 866 IVKWRRRETREAWN--NVTVW-GSRYVVGQTPVYVPYEIRV 903



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 30/296 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 159 DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 218

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 219 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 278

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK---- 305
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K    
Sbjct: 279 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 338

Query: 306 ----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
               E T     P+       V  G      C A   P+    I W +     D  S+  
Sbjct: 339 RGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 394

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
             ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+     L+ P N  L
Sbjct: 395 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 450



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 9/172 (5%)

Query: 421  VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
            ++W P++  S  G    Y V+ W  ++   +   + V        +   +VP      RV
Sbjct: 848  ITWTPMNATSAFGPNLRYIVK-WRRRETREAWNNVTVWGSRYVVGQTPVYVPYE---IRV 903

Query: 481  LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
             A N    GP  E +   + E +P   +             L+W  PE PNG++ GY +K
Sbjct: 904  QAENDFGKGPEPESVIGYSGEDLPSAPRRFRVRQPNLETINLEWDHPEHPNGIMTGYTLK 963

Query: 541  YQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            Y +  GTKVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 964  YVAFNGTKVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 1011



 Score = 47.0 bits (110), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 29/208 (13%)

Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
           N L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++  
Sbjct: 137 NELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 196

Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------ED 316
                + D           GEY CFARNK GTA     L+ +    ++  P       + 
Sbjct: 197 RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 251

Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
             V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     
Sbjct: 252 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 307

Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
           D    Y+C A+      I+ +   T++V
Sbjct: 308 DMQTDYSCNARFHFTHTIQQKNPFTLKV 335


>gi|224070363|ref|XP_002190771.1| PREDICTED: protein sidekick-1 [Taeniopygia guttata]
          Length = 2194

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 181/616 (29%), Positives = 271/616 (43%), Gaps = 48/616 (7%)

Query: 53  LFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE--VSN 108
           L C+    PL +    W ++G+ I  +  IS  ++G+ L I +   +D G Y CE  +  
Sbjct: 288 LECVANARPLERLSVTWKRNGIKI--TSGIS--SFGRRLTITNPTSADVGMYFCEAKLRE 343

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEPEFINAAE-EETVTFECKASGLPEPEIHWVHNGKPIS 167
              E       LS+L  PYFT EP+ +  AE E+ V   C+A G+P P + W  +  P+S
Sbjct: 344 STEEPARAKAFLSILEPPYFTAEPQNVILAEVEKDVDILCQAMGVPIPTLVWYKDSVPLS 403

Query: 168 QAPPNPRRKVG-PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
           +   NPR KV     + I  LR  D G + C A+N  G ++   Y++V    P   + P+
Sbjct: 404 RLE-NPRYKVLLSGGLRIHALRPQDAGIFQCFASNQAGEIHTYTYLDVTNIKPAFIQPPE 462

Query: 227 DEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDVAFAD 281
           D    +G T VLTC V GAP+P ++W   ++ L  G     R+ +LE+G L+I  V   D
Sbjct: 463 DTTVTEGMTAVLTCEVSGAPRPAISWKKGEQILASGSVQIPRFVLLESGGLQIAPVFLQD 522

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC A N  G       LTV   T I   PED  V  G +AT RC A  DP + +  
Sbjct: 523 AGNYTCCAANSEGALNAFVMLTVWNRTSIVHPPEDSTVIKGTTATLRCEATHDPRISIRY 582

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +W + S  I+  S  R     D +L ++++   D G YTC   +        A L V   
Sbjct: 583 LWKKDSAVINPSSSSRITVEKDGTLLISQTWSGDIGDYTCEVVSSGGNDSRTARLEVIEL 642

Query: 402 LEAPSNFTLIQVID---AKKAVVSWNPVSPQSLRGHFRG-----YKVQTWTEKDGEGSIR 453
             +P N  L+  ++   ++  V+SW  V P      F G     Y V   +E +    + 
Sbjct: 643 PHSPQN--LVATLNSSYSRSVVLSW--VRP------FDGNSPVLYYVVELSENNSPWKV- 691

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGT-VQSLE 511
            L     + T   V    PA     RV A N    G  S E    + PE  P    +++ 
Sbjct: 692 HLSNLDPKMTGVTVSGLTPARTYQFRVCAVNQVGKGRYSTETSRLMLPEEPPSAPPKNIV 751

Query: 512 AIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKL 569
           A    + +  ++W  P   + NGVL GY ++Y+ + G    P   +   I+        +
Sbjct: 752 ASGRTNQSIMVQWQPPPESEHNGVLHGYILRYR-LAGL---PGEYQYKNITSAEINYCLV 807

Query: 570 AGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLVISWTA 624
             L   T+Y I +A Y  AG GA S+      L  VP   P NV+        +   W  
Sbjct: 808 KDLIIWTQYEIQVASYNGAGLGAFSRPVTEYTLQGVPTAPPQNVQVEAVNSTTIQFLWNP 867

Query: 625 MPEIEHNAPHFKYRIF 640
            P+   N  +  Y++ 
Sbjct: 868 PPQQFINGINQGYKLL 883



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 165/673 (24%), Positives = 254/673 (37%), Gaps = 101/673 (15%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN-GVGEAK-SYSI 118
           P PQ  W +DG  I PS RI+       L+I  V  +D G Y  +  N   GE K S  I
Sbjct: 194 PRPQVTWFRDGHKIIPSSRIAI-TLENQLVILGVSETDAGGYYVQAVNEKNGENKTSPFI 252

Query: 119 DLSV--------LAAPYFTVEPEFIN-AAEEETVTFECKASGLP--EPEIHWVHNGKPIS 167
            LSV         AAP   + P   +  A     T EC A+  P     + W  NG  I+
Sbjct: 253 HLSVARASSPPASAAPAMVIRPHNTSVVAGSSEATLECVANARPLERLSVTWKRNGIKIT 312

Query: 168 QAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT---NSLGYVYKDVYVNVLAHAPEITEA 224
               +  R     R+TI N   +D G Y C A    ++        ++++L   P  T  
Sbjct: 313 SGISSFGR-----RLTITNPTSADVGMYFCEAKLRESTEEPARAKAFLSIL-EPPYFTAE 366

Query: 225 PKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITDVAFA 280
           P++    +  K V + C+  G P P + W  +      L   RY +L +G L+I  +   
Sbjct: 367 PQNVILAEVEKDVDILCQAMGVPIPTLVWYKDSVPLSRLENPRYKVLLSGGLRIHALRPQ 426

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKE-HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           D+G + CFA N+ G       L V          PED  V  G +A   C     P  + 
Sbjct: 427 DAGIFQCFASNQAGEIHTYTYLDVTNIKPAFIQPPEDTTVTEGMTAVLTCEVSGAP--RP 484

Query: 340 SIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +I W +G + +   S   PRFV      L +      D+G YTC A      + A   LT
Sbjct: 485 AISWKKGEQILASGSVQIPRFVLLESGGLQIAPVFLQDAGNYTCCAANSEGALNAFVMLT 544

Query: 398 V---QVPLEAPSNFTLIQVIDA------------------KKAVVSWNPVSPQSLRGHFR 436
           V      +  P + T+I+   A                  KK     NP S   +     
Sbjct: 545 VWNRTSIVHPPEDSTVIKGTTATLRCEATHDPRISIRYLWKKDSAVINPSSSSRITVEKD 604

Query: 437 GYKV--QTWTEKDGEGSIRELIVNKGESTTT---EVDKFVPASKNFARVLAFNGAYNGPP 491
           G  +  QTW+   G+ +  E++ + G  + T   EV +   + +N   V   N +Y    
Sbjct: 605 GTLLISQTWSGDIGDYTC-EVVSSGGNDSRTARLEVIELPHSPQNL--VATLNSSY---- 657

Query: 492 SEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP 551
                                    S +  L WV+P   N  ++ Y ++  S   +    
Sbjct: 658 -------------------------SRSVVLSWVRPFDGNSPVLYYVVEL-SENNSPWKV 691

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG---AESKYLFY---VPFKNP 605
            L  L    DP  T   ++GL P+  Y+  +    + G G    E+  L      P   P
Sbjct: 692 HLSNL----DPKMTGVTVSGLTPARTYQFRVCAVNQVGKGRYSTETSRLMLPEEPPSAPP 747

Query: 606 DNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVL 665
            N+   G T  ++++ W   PE EHN     Y + +R       +   ++     +  ++
Sbjct: 748 KNIVASGRTNQSIMVQWQPPPESEHNGVLHGYILRYRLAGLPGEYQYKNITSAEINYCLV 807

Query: 666 ANQPTFQPYEIKV 678
            +   +  YEI+V
Sbjct: 808 KDLIIWTQYEIQV 820



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 91/229 (39%), Gaps = 24/229 (10%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P N   ++ +++      WNP   Q + G  +GYK+  W   D   S+  + +  
Sbjct: 843  VPTAPPQNVQ-VEAVNSTTIQFLWNPPPQQFINGINQGYKLLAW-PVDAPESVTVVTIAP 900

Query: 460  G-----ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                      T + KF   +  +  VL F    +GP S      T E  PG V  L    
Sbjct: 901  DFHGVHSGCITNLRKF---TSYYTSVLCFTTPGDGPRSPPQLLRTLEDKPGAVGHLSFTE 957

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
            +  ++  + W +P + NG++ GY+I ++     +      RL      +T   K+ GL  
Sbjct: 958  ILDTSLKVSWQEPVEKNGIITGYQISWEVYGRNE-----SRLARTLSNSTLEYKITGLSS 1012

Query: 575  STKYRIHLAGYTKAGDG--AESKYLFYVPFKNPDNVEGRGSTPNNLVIS 621
             T Y I +A  T  G G    S     VP + P         P NLVIS
Sbjct: 1013 LTTYTIEVAAVTAQGSGWVTSSTISSGVPPELP-------GAPTNLVIS 1054



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 86/382 (22%), Positives = 150/382 (39%), Gaps = 46/382 (12%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           ++ L   ++ L C+  G+      W  +   ++    I+  +     II  ++ +D G Y
Sbjct: 89  QIHLEGNRLVLTCLAEGS------WPLEFKWLHNDSEITSYSSEYKYIIPALQRADAGFY 142

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGL--------PE 154
            C V N +G        + V          +F+   + +TVT E +A+ L        P 
Sbjct: 143 QCVVRNRMGALLQRRSQVQV------AYMGDFMGTDQRKTVT-EGQAAVLNFPHILSHPR 195

Query: 155 PEIHWVHNGKPISQAPPNPRRKVG-PNRITIENLRKSDTGNYGCNATNSLGYVYKD---V 210
           P++ W  +G  I    P+ R  +   N++ I  + ++D G Y   A N      K    +
Sbjct: 196 PQVTWFRDGHKII---PSSRIAITLENQLVILGVSETDAGGYYVQAVNEKNGENKTSPFI 252

Query: 211 YVNV-------LAHAPEITEAPKDEYTVDGKT-VVLTCRVFGAP--KPEVNWIHNQKELT 260
           +++V        + AP +   P +   V G +   L C     P  +  V W  N  ++T
Sbjct: 253 HLSVARASSPPASAAPAMVIRPHNTSVVAGSSEATLECVANARPLERLSVTWKRNGIKIT 312

Query: 261 GGRYTILETGDLKITDVAFADSGEYTCFARNKLGT---AQGSGSLTVKEHTHITDQPEDY 317
            G  +      L IT+   AD G Y C A+ +  T   A+    L++ E  + T +P++ 
Sbjct: 313 SGISSFGR--RLTITNPTSADVGMYFCEAKLRESTEEPARAKAFLSILEPPYFTAEPQNV 370

Query: 318 EV-EAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
            + E  +     C A+  P   L  VW + S P+     PR+       L +      D+
Sbjct: 371 ILAEVEKDVDILCQAMGVPIPTL--VWYKDSVPLSRLENPRYKVLLSGGLRIHALRPQDA 428

Query: 377 GQYTCRAQTELDFIEAQATLTV 398
           G + C A  +   I     L V
Sbjct: 429 GIFQCFASNQAGEIHTYTYLDV 450



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 2/142 (1%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP N   +  + A +  ++W+P    S  G  +GYK+  W E D      ++ V   
Sbjct: 1676 PALAPQNIQ-VNSLSASQLELTWDPPPADSQNGIIQGYKIYYW-ESDTLNDTEKVKVLFL 1733

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
              T+  +      ++    + AFN A +GP S      T +  P     L    +  +  
Sbjct: 1734 PETSVRLKNLTSHTRYLVCISAFNAAGDGPRSSPAQGRTHQAAPSAPSFLAFSEITCTTL 1793

Query: 521  YLKWVKPEQPNGVLMGYKIKYQ 542
             + W +P   NGVL GY++ Y+
Sbjct: 1794 NVSWGEPTAANGVLQGYRVVYE 1815



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 151/381 (39%), Gaps = 63/381 (16%)

Query: 263  RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAG 322
            ++T +E G       A   S E     R    T QG G     E T IT +  +      
Sbjct: 1399 KFTTVEVGSTVRQFTATDLSPESAYIFRTSAKTRQGWGEPL--EATVITTEKRERPAPPR 1456

Query: 323  QSATFRCNAVSDPSLKLSIVWLRGSE---PI-------------DFESEPRFVQSNDYSL 366
            Q  T + + VS  SL L+  WL GS+   PI             D+++    +     S 
Sbjct: 1457 QVMTPQGD-VSSRSLVLT--WLPGSDGSSPIRYFTVQVRELPHGDWQTYSSSISHEATSC 1513

Query: 367  TVTKSSELDSGQYTCRAQTEL---DF-IEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVV 421
             +   +   S +   +A  ++   DF  E +A  T+Q VP E PS+  L+        +V
Sbjct: 1514 IIESLNPFTSYKLRVKATNDIGDSDFSAETEAVTTLQDVPDEPPSS-VLVTPHTTSSVLV 1572

Query: 422  SWNPVSPQSLRGHFRGYKVQTWTEKD---GEGSIRELIVN----KGESTTTEVDKFVPAS 474
             W P   +S+ G   GY++  + E D   G G+  + I N    + E T     K V +S
Sbjct: 1573 QWQPPKAESVNGLLLGYRIY-YRELDYDTGPGTESKTIQNPSALRAELTPQSSFKTVNSS 1631

Query: 475  -----------KNFARVLAFNGAYN----GPPSEIISFVTPEGVPGTV-QSLEAIPLGSS 518
                       K + R      AYN     P S  +     E  P    Q+++   L +S
Sbjct: 1632 SALTTYELTQLKKYKRYEVLMTAYNVIGESPTSTPVEVFVGEAAPALAPQNIQVNSLSAS 1691

Query: 519  AFYLKWVKP--EQPNGVLMGYKIKY---QSVKGTKVGPLLERLPYISDPTTTSAKLAGLE 573
               L W  P  +  NG++ GYKI Y    ++  T      E++  +  P  TS +L  L 
Sbjct: 1692 QLELTWDPPPADSQNGIIQGYKIYYWESDTLNDT------EKVKVLFLP-ETSVRLKNLT 1744

Query: 574  PSTKYRIHLAGYTKAGDGAES 594
              T+Y + ++ +  AGDG  S
Sbjct: 1745 SHTRYLVCISAFNAAGDGPRS 1765



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 117/289 (40%), Gaps = 50/289 (17%)

Query: 426  VSPQSLRGHFR-GYKVQTWTEKDGEGSIRELIV--------------------NKGESTT 464
            +SP+S    FR GY        DG+ SI + IV                    N+ ++  
Sbjct: 1056 ISPRSATLQFRPGY--------DGKTSISKWIVEGQVGVLGDEEEWVTLHEVENEPDAQM 1107

Query: 465  TEVDKFVPASKNFARVLAFNGAYNGP---PSEIISFVT--PEGVPGTVQSLEAIPLGSSA 519
             EV    P +    R+   N     P   PS +I  +   P+  PG+V    A     ++
Sbjct: 1108 LEVPNLTPYTHYRFRMRQVNVVGPSPLSQPSRVIQTLQAPPDVAPGSVTVRTA---SETS 1164

Query: 520  FYLKWVK-PE-QPNG--VLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
             +L+WV  P+ Q NG    +GY+I+  + +     P L  L  ++D       L  L+  
Sbjct: 1165 LWLRWVPLPDTQYNGNPESVGYRIR--AWRADLPAPAL--LKVLADRLARECTLEELQEW 1220

Query: 576  TKYRIHLAGYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEH 630
            T+Y + +  +   G G  S+ +       VP   P+NV     +   ++++W A+PE E 
Sbjct: 1221 TEYELQIQAFNAIGAGPWSEAVRGRTRESVPSAPPENVSAEAVSSTQILLTWAAVPESEQ 1280

Query: 631  NAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVV 679
            N     Y+I ++  +         V       ++L+    F  YE++V+
Sbjct: 1281 NGLILGYKILYKAKDLDSEPKSQTVRGNHTQSVLLSGLRKFVLYELQVL 1329



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 69/169 (40%), Gaps = 14/169 (8%)

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT--GGRYTILETGDLKITDVAF 279
           TE    +  ++G  +VLTC   G+   E  W+HN  E+T     Y  +      I  +  
Sbjct: 83  TEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWLHNDSEITSYSSEYKYI------IPALQR 136

Query: 280 ADSGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC-NAVSDPSL 337
           AD+G Y C  RN++G   Q    + V          +   V  GQ+A     + +S P  
Sbjct: 137 ADAGFYQCVVRNRMGALLQRRSQVQVAYMGDFMGTDQRKTVTEGQAAVLNFPHILSHP-- 194

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           +  + W R    I   S  R   + +  L +   SE D+G Y  +A  E
Sbjct: 195 RPQVTWFRDGHKIIPSS--RIAITLENQLVILGVSETDAGGYYVQAVNE 241


>gi|213982987|ref|NP_001135654.1| neuronal cell adhesion molecule precursor [Xenopus (Silurana)
           tropicalis]
 gi|197246560|gb|AAI68554.1| Unknown (protein for MGC:184780) [Xenopus (Silurana) tropicalis]
          Length = 1294

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/356 (33%), Positives = 177/356 (49%), Gaps = 7/356 (1%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           CI  G P P+  W K+   + P++R+   N+ K+L I  V  +D G Y C   N +G   
Sbjct: 268 CIAEGLPTPEIHWRKESADL-PANRVFYENFNKTLKIIDVTEADAGKYKCIGRNILGTTH 326

Query: 115 SYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPR 174
            + I ++V AAPY+   P  I  +  E  +  C+ASG P P I W+ NG  I  AP +  
Sbjct: 327 -HIITVTVKAAPYWITPPRNIVLSPGEDGSLTCRASGSPTPSITWLINGVSIELAPTDAS 385

Query: 175 RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK 234
           R+V  + I    ++   T  Y CNA+N  GY+  + +VNV+A  P I  +      +   
Sbjct: 386 RRVDGDTIMFSKVQDGATAVYQCNASNKYGYLLANAFVNVIAEPPRIMMSKHVYKVIANN 445

Query: 235 TVVLTCRVFGAPKPEVNWIH--NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNK 292
             +L C  FG+PKPE+ W    +   L G  Y   + G L+I       SG YTC A N 
Sbjct: 446 VALLHCPFFGSPKPEIKWFKGAHGSVLHGNGYVFHDNGTLEIPVAQKDSSGNYTCVATNS 505

Query: 293 LGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDF 352
            G+ +    L +K+ T I  QPE   ++   SA F C    DP+LK  ++WL+  +  + 
Sbjct: 506 FGSVKDMIGLQIKDPTMIIKQPEYRVIQRYGSAHFECRVKHDPTLKPVVIWLK--DDTEL 563

Query: 353 ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNF 408
            ++ RF  +  + LT+   +E D G YTC A T+LD + A A LTV      P+ F
Sbjct: 564 PNDERFKVTKGH-LTIKNVTEKDEGTYTCVANTDLDTVSASAVLTVVEATPTPAIF 618



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 163/662 (24%), Positives = 252/662 (38%), Gaps = 74/662 (11%)

Query: 59  GTPLPQTIWSKDGVPINPSD-RISQGNYGKSLIIKHVEFSD-QGSYTCEVSNGVGEA--K 114
           G P P   W  +     P + R+SQG  G  L   +V+  D +  Y C     + +   +
Sbjct: 167 GLPPPIIFWMDNSFQKLPQNKRVSQGLNG-DLYFSNVQPEDTRDFYICYARFNLTQTIHQ 225

Query: 115 SYSIDLSVLA-APYFTVEPEFI---NAAEEETVTFE------CKASGLPEPEIHWVHNGK 164
              I L VL+ +P     P  +   N    +TV         C A GLP PEIHW     
Sbjct: 226 KQPISLKVLSNSPAGERRPSMLFPNNTTSNKTVLLGEVLLLECIAEGLPTPEIHWRKESA 285

Query: 165 PISQAPPNPRRKVGPNRITIENLRKS---------DTGNYGCNATNSLGYVYKDVYVNVL 215
            +             NR+  EN  K+         D G Y C   N LG  +  + V V 
Sbjct: 286 DLPA-----------NRVFYENFNKTLKIIDVTEADAGKYKCIGRNILGTTHHIITVTVK 334

Query: 216 AHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QKELTGGRYTILETGD-L 272
           A AP     P++     G+   LTCR  G+P P + W+ N    EL     +    GD +
Sbjct: 335 A-APYWITPPRNIVLSPGEDGSLTCRASGSPTPSITWLINGVSIELAPTDASRRVDGDTI 393

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTV-KEHTHITDQPEDYEVEAGQSATFRCNA 331
             + V    +  Y C A NK G    +  + V  E   I      Y+V A   A   C  
Sbjct: 394 MFSKVQDGATAVYQCNASNKYGYLLANAFVNVIAEPPRIMMSKHVYKVIANNVALLHCPF 453

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
              P  K  I W +G+          +V  ++ +L +  + +  SG YTC A      ++
Sbjct: 454 FGSP--KPEIKWFKGAHGSVLHGN-GYVFHDNGTLEIPVAQKDSSGNYTCVATNSFGSVK 510

Query: 392 AQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYK-VQTWTEKDGEG 450
               L ++ P       T+I      + +  +     +    H    K V  W + D E 
Sbjct: 511 DMIGLQIKDP-------TMIIKQPEYRVIQRYGSAHFECRVKHDPTLKPVVIWLKDDTEL 563

Query: 451 SIRELI-VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQS 509
              E   V KG  T   V +     +     +A         S +++ V     P     
Sbjct: 564 PNDERFKVTKGHLTIKNVTE---KDEGTYTCVANTDLDTVSASAVLTVVEATPTPAIFYD 620

Query: 510 -------LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
                  LE       +  L WV  +  N  +  + I+Y+    T   P           
Sbjct: 621 RPDHPFDLELTDHLERSVQLSWVPGDDNNSPITNFIIEYED---TMHDPGTWHFLTKVSG 677

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAG--DGAESKYLFYV----PFKNPDNVEGRGSTPN 616
           T T+A+L  L P   Y   +    + G  + +ES   +      P KNP  V+G G+ P+
Sbjct: 678 TQTTARL-NLSPFVNYSFRVIAVNEFGRSEPSESSEQYMTKPAEPDKNPSGVKGVGTEPD 736

Query: 617 NLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEI 676
           NLVI+W ++   + N P  +Y++ WR+ +  + W    ++    S+ +++  PTF+PYEI
Sbjct: 737 NLVIAWESIKGFDSNGPGLQYKVSWRQKDFDDEWTS--IIVANVSKYIVSGTPTFEPYEI 794

Query: 677 KV 678
           KV
Sbjct: 795 KV 796



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 99/201 (49%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW-----TEKDGEGSIRE 454
            +P+ APSN  L +VI+   A V W+ V   S+RGH +GY+V  W     T+++     + 
Sbjct: 819  LPMTAPSNVEL-EVINNTLAKVQWDSVPSTSIRGHLQGYRVYYWKAENHTKRNKRHMEKR 877

Query: 455  LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
            ++   G  T   +    P +     V  FNG   GPPS    F TPEGVP     L+ + 
Sbjct: 878  MLTFHGNKTHGMLPGLEPYTSYILNVRVFNGKGEGPPSTDKYFETPEGVPSAPLKLDVVE 937

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERLPYISDPTT-TSAKLAGL 572
                +  L W  P  PNGVL  Y + +QS+  T ++ P +E    I+ PT  TS  L  L
Sbjct: 938  RTIESLTLMWKPPAHPNGVLTHYTLIFQSINATHELSPPVE----ITVPTNETSLVLRNL 993

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +L  +T  G G +
Sbjct: 994  NQSTRYKFYLYAHTVVGPGIQ 1014



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 135/581 (23%), Positives = 220/581 (37%), Gaps = 35/581 (6%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPIN--PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
           L C   G+P P   W  +GV I   P+D  S+   G +++   V+      Y C  SN  
Sbjct: 356 LTCRASGSPTPSITWLINGVSIELAPTD-ASRRVDGDTIMFSKVQDGATAVYQCNASNKY 414

Query: 111 GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAP 170
           G   + +    +   P   +                C   G P+PEI W   G   S   
Sbjct: 415 GYLLANAFVNVIAEPPRIMMSKHVYKVIANNVALLHCPFFGSPKPEIKWF-KGAHGSVLH 473

Query: 171 PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
            N         + I   +K  +GNY C ATNS G V KD+    +     I + P+    
Sbjct: 474 GNGYVFHDNGTLEIPVAQKDSSGNYTCVATNSFGSV-KDMIGLQIKDPTMIIKQPEYRVI 532

Query: 231 VDGKTVVLTCRVFGAP--KPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCF 288
               +    CRV   P  KP V W+ +  EL       +  G L I +V   D G YTC 
Sbjct: 533 QRYGSAHFECRVKHDPTLKPVVIWLKDDTELPNDERFKVTKGHLTIKNVTEKDEGTYTCV 592

Query: 289 ARNKLGTAQGSGSLTVKEHTHIT-------DQPEDYEVEAGQSATFRCNAV--SDPSLKL 339
           A   L T   S  LTV E T          D P D E+      + + + V   D +  +
Sbjct: 593 ANTDLDTVSASAVLTVVEATPTPAIFYDRPDHPFDLELTDHLERSVQLSWVPGDDNNSPI 652

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT-- 397
           +   +   + +       F+     + T  + +      Y+ R     +F  ++ + +  
Sbjct: 653 TNFIIEYEDTMHDPGTWHFLTKVSGTQTTARLNLSPFVNYSFRVIAVNEFGRSEPSESSE 712

Query: 398 --VQVPLEAPSNFTLIQVI--DAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
             +  P E   N + ++ +  +    V++W  +      G    YKV +W +KD +    
Sbjct: 713 QYMTKPAEPDKNPSGVKGVGTEPDNLVIAWESIKGFDSNGPGLQYKV-SWRQKDFDDEWT 771

Query: 454 ELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQS-LE 511
            +IV N  +   +    F P      +V A N     P   ++   + E +P T  S +E
Sbjct: 772 SIIVANVSKYIVSGTPTFEPYE---IKVQALNDIGYAPDPSVVIGYSGEDLPMTAPSNVE 828

Query: 512 AIPLGSSAFYLKW--VKPEQPNGVLMGYKIKY-QSVKGTKVGPL-LERLPYISDPTTTSA 567
              + ++   ++W  V      G L GY++ Y ++   TK     +E+         T  
Sbjct: 829 LEVINNTLAKVQWDSVPSTSIRGHLQGYRVYYWKAENHTKRNKRHMEKRMLTFHGNKTHG 888

Query: 568 KLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNV 608
            L GLEP T Y +++  +   G+G  S   +   F+ P+ V
Sbjct: 889 MLPGLEPYTSYILNVRVFNGKGEGPPSTDKY---FETPEGV 926



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 76/340 (22%), Positives = 128/340 (37%), Gaps = 39/340 (11%)

Query: 102 YTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECKASGLPEPEIHWV 160
           + C+V   +       +   +L  P  T + P+       E++  +C+A G P P   W 
Sbjct: 17  FLCQVITALEVPLDPILQKELLQPPTITHQSPKNYIVDPRESIVIQCEAKGKPPPSFSWT 76

Query: 161 HNGKPIS-QAPPNPRRKVGPNRITIENLRKSDT----GNYGCNATNSLGYVYKDVYVNVL 215
            NG        P    K     + I  +  +      G Y C A N  G    +  V   
Sbjct: 77  RNGTHFDIDKDPYVTMKQNSGTLVINTMNGARVEAYEGEYQCTARNDRGSALSNNIVVRQ 136

Query: 216 AHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN--QKELTGGRYTILETGD 271
           + +P  T+   +   +  G  +VL C    G P P + W+ N  QK     R +    GD
Sbjct: 137 SRSPLWTKEKIEPIVIQQGVPLVLPCNPPKGLPPPIIFWMDNSFQKLPQNKRVSQGLNGD 196

Query: 272 LKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           L  ++V   D+ + Y C+AR N   T      +++K    +++ P     E   S  F  
Sbjct: 197 LYFSNVQPEDTRDFYICYARFNLTQTIHQKQPISLKV---LSNSPAG---ERRPSMLFPN 250

Query: 330 NAVSDPSLKLS----------------IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           N  S+ ++ L                 I W +  E  D  +   F ++ + +L +   +E
Sbjct: 251 NTTSNKTVLLGEVLLLECIAEGLPTPEIHWRK--ESADLPANRVFYENFNKTLKIIDVTE 308

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
            D+G+Y C  +  L       T+TV+     +  P N  L
Sbjct: 309 ADAGKYKCIGRNILGTTHHIITVTVKAAPYWITPPRNIVL 348


>gi|426240195|ref|XP_004013999.1| PREDICTED: neurofascin [Ovis aries]
          Length = 1219

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/316 (35%), Positives = 165/316 (52%), Gaps = 7/316 (2%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           T   ++ LR   + L CI  G P P   W K G  + PSD+    N+ K+L I +V   D
Sbjct: 262 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 320

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C  SN +G  + ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + 
Sbjct: 321 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 379

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P+  APPNP R+V  + I   + + S    Y CN++N  GY+  + +V+VL   
Sbjct: 380 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNSSNEHGYLLANAFVSVLDVP 439

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
           P +  +P+++    +      L C  FG+P P + W  N +   L GG Y + E G L+I
Sbjct: 440 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 498

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +   D G YTC A N LG A+    L VK+ T I   PED   + G +    C    D
Sbjct: 499 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGSTVQLECRVKHD 558

Query: 335 PSLKLSIVWLRGSEPI 350
           PSLKL++ WL+  EP+
Sbjct: 559 PSLKLTVSWLKDDEPL 574



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 102/228 (44%), Gaps = 23/228 (10%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            Y  R Q E DF +     TV        P  AP++   I+V+++    + W+ V   +++
Sbjct: 838  YEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVK-IRVLNSTAISLQWSRVYSDTVQ 896

Query: 433  GHFRGYKVQTWTEKDGEGSIRELIVNK--------GESTTTEVDKFVPASKNFARVLAFN 484
            G  R Y+   W E      ++ L V++        G+     V +  P S     ++  N
Sbjct: 897  GQLREYRAYYWRES---SLLKNLWVSQKRQQAGFPGDRLRGVVSRLFPYSNYKLEMVVVN 953

Query: 485  GAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
            G  +GP SE   F TPEGVP   +             L+W  PE PNG+L+GY +KY + 
Sbjct: 954  GRGDGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLKYVAF 1013

Query: 545  KGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             GTKVG  ++E       P  T   +   +P ++YR  L+  T+ G G
Sbjct: 1014 NGTKVGKQIVENF----SPNQTKFTVQRADPVSRYRFSLSARTQVGSG 1057



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 150/705 (21%), Positives = 255/705 (36%), Gaps = 107/705 (15%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 160 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVVLQDMQTDYSCNARFHFTHTIQQ 218

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINA--AEEETVTF--------------------E 146
              +++ + +   PY        P+  +A    E T +F                    E
Sbjct: 219 KNPFTLKV-LTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLE 277

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C ASG+P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G 
Sbjct: 278 CIASGVPTPDIAWYKKGGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 334

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--- 262
           +   + V V A AP   + PK+     G+   L CR  G PKP V W+ N + L      
Sbjct: 335 IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN 393

Query: 263 --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R    +T  +   D   +    Y C + N+ G    +  ++V +       P +  + 
Sbjct: 394 PNREVAGDT--IIFRDTQISSRAVYQCNSSNEHGYLLANAFVSVLDVPPRMLSPRNQLIR 451

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
                  R +     S   ++ W +  +  + +     V  N  SL +    + D G YT
Sbjct: 452 VILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYT 510

Query: 381 CRAQTELDFIEAQATLTVQVPL--------EAPSNFTLIQV------IDAKKAVVSWNPV 426
           C A   L   E Q  L V+ P         +     + +Q+        + K  VSW   
Sbjct: 511 CVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGSTVQLECRVKHDPSLKLTVSWL-K 569

Query: 427 SPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD---------------KFV 471
             + L    R   +       G      L+V +G +  + V                +  
Sbjct: 570 DDEPLYISNRSLLLPPCLLLSGALPSPLLLVMRGRTCGSHVGVSLHRPGEQWAQARCRHQ 629

Query: 472 PASKNFARVLAFNGAYNGPPSEIIS----FVTPEGVPGTVQSLEAIPLGSSAFYLKWVKP 527
            + +     LA  GA  G P +          P+G P   + LE   L   +  L W+  
Sbjct: 630 DSKQTACPALAAEGAREGLPDQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPG 689

Query: 528 EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
           +  N  +  Y ++++  +  + G   +   +   P + ++ +  L P   Y+  +    +
Sbjct: 690 DDNNSPITDYVVQFEEDQ-FQPGVWHDHSRF---PGSVNSAVLRLSPYVNYQFRVIAINE 745

Query: 588 AGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWT-----AMPE---IEHNAP 633
            G    S      +     P  NP +V+G G+  NN+ I+WT     A P         P
Sbjct: 746 VGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTVRAPPARPRGLPGSLRVP 805

Query: 634 HFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           H   R+              + +       V+   P + PYEI+V
Sbjct: 806 HHSCRL--------SPLGAGNTVAGGGPRYVVGQTPVYVPYEIRV 842



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 121/321 (37%), Gaps = 47/321 (14%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGN 194
            + +  EC+A G P P  HW  N K   I++ P  + RR+ G   I   +  + +   G 
Sbjct: 49  RDNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGE 108

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNW 252
           Y C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W
Sbjct: 109 YQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFW 168

Query: 253 IHNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHT 308
           + +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T
Sbjct: 169 MSSSMEPITQDKRVSQGHNGDLYFSNVVLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLT 228

Query: 309 H-------ITDQPEDYEVEA----------------------GQSATFRCNAVSDPSLKL 339
           +       + + P+ Y                          G      C A   P+   
Sbjct: 229 NHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--P 286

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            I W +     D  S+    ++ + +L +T  SE DSG+Y C A  ++  I    ++ V+
Sbjct: 287 DIAWYKKGG--DLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVK 344

Query: 400 VP---LEAPSNFTLIQVIDAK 417
                L+ P N  L    D +
Sbjct: 345 AAPYWLDEPKNLILAPGEDGR 365



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 90/216 (41%), Gaps = 35/216 (16%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELT---GGRYTILETG 270
           L+  P IT+    ++ VD +  +++ C   G P P  +W  N K        R ++    
Sbjct: 30  LSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRRRS 89

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 90  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 144

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSND----YSLTVTKSS 372
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++    +S  V +  
Sbjct: 145 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVVLQDM 200

Query: 373 ELDSGQYTCRAQTELDF-IEAQATLTVQVPLEAPSN 407
           + D   Y+C A+      I+ +   T++V    P N
Sbjct: 201 QTD---YSCNARFHFTHTIQQKNPFTLKVLTNHPYN 233


>gi|296236723|ref|XP_002807966.1| PREDICTED: LOW QUALITY PROTEIN: neural cell adhesion molecule
           L1-like [Callithrix jacchus]
          Length = 1248

 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 195/718 (27%), Positives = 307/718 (42%), Gaps = 74/718 (10%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L + +V   D G Y 
Sbjct: 253 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLNVGEEDDGEYR 311

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ +   ++V AAPY+  +P+       ET   +C+  G P+PEI W  NG
Sbjct: 312 CLAENSLGSAR-HDYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEITWRING 370

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   +P  ++    + + N + SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 371 IPVEELAMDPNYRIQRGALILNNXQTSDTMVTQCEAGNRNGLLLANAYIYVVQLPAKILT 430

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 431 ADNQTYMAVRGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 490

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L +K+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 491 DTGRYFCQAANDQNNVTIVANLQIKDATQITQGPRSTIEKKGSRVTFTCQASFDPSLQPS 550

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 551 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDMVESRAQLLV 608

Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
                 VP  A S+  L++     +  +SW+P    +       Y ++   ++       
Sbjct: 609 VGSPGSVPRLALSDLHLLK---QSQVRLSWSPAEDHN--APIEKYDIEFEDKEMAPEKWY 663

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTV----- 507
            L    G  T+T + K  P      RV A N    G PS +  + VTPE  P        
Sbjct: 664 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVNVK 722

Query: 508 -QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
            +  E   +  +   L+W+    P    + Y+++++  +GT+ GP  E++  +SDP    
Sbjct: 723 GEGNETTNMVITWKPLRWMDWNAPQ---VQYRVQWRP-QGTR-GPWQEQI--VSDPFLVV 775

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
           +  +   P   Y I +    + G G E +    + +   D  +              A+P
Sbjct: 776 SNTSTFVP---YEIKVQAVNRQGKGPEPQ--VTIGYSGEDYPQ--------------AVP 816

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVL-DWRQSELVLANQPTFQPYEIKVVQTWTEK 685
           E+E                  E  N   VL  WR  +LV   +   + Y +   +  +++
Sbjct: 817 ELE----------------GIEILNSSAVLVKWRPVDLVQV-KGHLRGYNVTYWREGSQR 859

Query: 686 --DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                 + R+ +V    +T+  +    P S     V AFNG   GP SE  +F TPEG
Sbjct: 860 KHSKRHTHRDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGLGPASE-FTFSTPEG 916



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 173/693 (24%), Positives = 266/693 (38%), Gaps = 88/693 (12%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +P+ RI +G    +LI+ + + SD     CE  
Sbjct: 352  LDCQVQGRPQPEITWRINGIPVEELAMDPNYRIQRG----ALILNNXQTSDTMVTQCEAG 407

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + +   A    T    CKA G P P + W+  +G 
Sbjct: 408  NRNGLLLANAY-IYVVQLPAKILTADNQTYMAVRGSTAYLLCKAFGAPVPSVQWLDEDGT 466

Query: 165  PISQAP---PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q     P     +G     I +L+ +DTG Y C A N    V   +  N+ +  A +
Sbjct: 467  TVLQDERFFPYANGTLG-----IRDLQANDTGRYFCQAANDQNNV--TIVANLQIKDATQ 519

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWI---HNQKELTGGRYTILETGDLKIT 275
            IT+ P+      G  V  TC+    P  +P + W     + +EL       +E G L I 
Sbjct: 520  ITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDGRDLQELGDSDKYFIEDGRLVIH 579

Query: 276  DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
             + ++D G Y+C A  +L   +    L V                 G   +    A+SD 
Sbjct: 580  SLDYSDQGNYSCVASTELDMVESRAQLLV----------------VGSPGSVPRLALSDL 623

Query: 336  SL-KLSIVWLRGS---------EPIDFESEPRFVQSND-YSLTVTKSSELDSG------- 377
             L K S V L  S         E  D E E + +     YSL     ++  +        
Sbjct: 624  HLLKQSQVRLSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYV 683

Query: 378  QYTCRAQTELDFIEAQ---ATLTVQVPLEAPSNFTLI---QVIDAKKAVVSWNPVSPQSL 431
             YT R      +   +    + TV  P  AP    +    +  +    V++W P+     
Sbjct: 684  HYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVNVKGEGNETTNMVITWKPLRWMDW 743

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                  Y+VQ W  +   G  +E IV+      +    FVP      +V A N    GP 
Sbjct: 744  NAPQVQYRVQ-WRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYE---IKVQAVNRQGKGPE 799

Query: 492  SEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVKG 546
             ++    + E  P  V  LE I  L SSA  +KW  V   Q  G L GY + Y  +  + 
Sbjct: 800  PQVTIGYSGEDYPQAVPELEGIEILNSSAVLVKWRPVDLVQVKGHLRGYNVTYWREGSQR 859

Query: 547  TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF---K 603
                    R   +    TTS  L+GL P + Y + +  +   G G  S++ F  P     
Sbjct: 860  KHSKRHTHRDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGLGPASEFTFSTPEGVPG 919

Query: 604  NPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSEL 663
            +P+ +     +  +L + W   P + HN     Y + +R  + G         + R  EL
Sbjct: 920  HPEALHVECQSNTSLRLHW--QPPLSHNGVLTGYVLSYRPLDEGGKGQLS--FNLRDPEL 975

Query: 664  VLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
               N     P   Y  ++  T  E  GE  +RE
Sbjct: 976  RTHNLTDLSPHLRYRFQLQATTKEGPGEAIVRE 1008



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 99/391 (25%), Positives = 161/391 (41%), Gaps = 38/391 (9%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS----QGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P D +     Q  +  S  I   + 
Sbjct: 43  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKDELGVTVYQSPHSGSFTITGNNS 102

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P      E E+V   C  
Sbjct: 103 NFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPV--EVEEGESVVLPCHP 160

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 161 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 218

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 219 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 278

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++ +V   D GEY C A N LG+A+    +TV+   +   +
Sbjct: 279 PSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSARHDYYVTVEAAPYWLHK 338

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPI-DFESEPRF-VQSNDYSLTVTKS 371
           P+ +    G++A   C     P  +  I W     P+ +   +P + +Q     L   ++
Sbjct: 339 PQSHLYGPGETARLDCQVQGRP--QPEITWRINGIPVEELAMDPNYRIQRGALILNNXQT 396

Query: 372 SELDSGQYTCRAQTELDFIEAQATL-TVQVP 401
           S  D+    C A      + A A +  VQ+P
Sbjct: 397 S--DTMVTQCEAGNRNGLLLANAYIYVVQLP 425


>gi|167045807|gb|ABZ10475.1| L1 cell adhesion molecule isoform 1 precursor (predicted)
           [Callithrix jacchus]
          Length = 1252

 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 194/718 (27%), Positives = 308/718 (42%), Gaps = 74/718 (10%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L + +V   D G Y 
Sbjct: 253 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLNVGEEDDGEYR 311

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ +   ++V AAPY+  +P+       ET   +C+  G P+PEI W  NG
Sbjct: 312 CLAENSLGSAR-HDYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEITWRING 370

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 371 IPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEAGNRHGLLLANAYIYVVQLPAKILT 430

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 431 ADNQTYMAVRGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 490

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L +K+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 491 DTGRYFCQAANDQNNVTIVANLQIKDATQITQGPRSTIEKKGSRVTFTCQASFDPSLQPS 550

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 551 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDMVESRAQLLV 608

Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
                 VP  A S+  L++     +  +SW+P    +       Y ++   ++       
Sbjct: 609 VGSPGSVPRLALSDLHLLK---QSQVRLSWSPAEDHN--APIEKYDIEFEDKEMAPEKWY 663

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTV----- 507
            L    G  T+T + K  P      RV A N    G PS +  + VTPE  P        
Sbjct: 664 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVNVK 722

Query: 508 -QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
            +  E   +  +   L+W+    P    + Y+++++  +GT+ GP  E++  +SDP    
Sbjct: 723 GEGNETTNMVITWKPLRWMDWNAPQ---VQYRVQWRP-QGTR-GPWQEQI--VSDPFLVV 775

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
           +  +   P   Y I +    + G G E +    + +   D  +              A+P
Sbjct: 776 SNTSTFVP---YEIKVQAVNRQGKGPEPQ--VTIGYSGEDYPQ--------------AVP 816

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVL-DWRQSELVLANQPTFQPYEIKVVQTWTEK 685
           E+E                  E  N   VL  WR  +LV   +   + Y +   +  +++
Sbjct: 817 ELE----------------GIEILNSSAVLVKWRPVDLVQV-KGHLRGYNVTYWREGSQR 859

Query: 686 --DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                 + R+ +V    +T+  +    P S     V AFNG   GP SE  +F TPEG
Sbjct: 860 KHSKRHTHRDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGLGPASE-FTFSTPEG 916



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 173/693 (24%), Positives = 265/693 (38%), Gaps = 88/693 (12%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI +G    +LI+ +V+ SD     CE  
Sbjct: 352  LDCQVQGRPQPEITWRINGIPVEELAKDQKYRIQRG----ALILSNVQPSDTMVTQCEAG 407

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + +   A    T    CKA G P P + W+  +G 
Sbjct: 408  NRHGLLLANAY-IYVVQLPAKILTADNQTYMAVRGSTAYLLCKAFGAPVPSVQWLDEDGT 466

Query: 165  PISQAP---PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q     P     +G     I +L+ +DTG Y C A N    V   +  N+ +  A +
Sbjct: 467  TVLQDERFFPYANGTLG-----IRDLQANDTGRYFCQAANDQNNV--TIVANLQIKDATQ 519

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWI---HNQKELTGGRYTILETGDLKIT 275
            IT+ P+      G  V  TC+    P  +P + W     + +EL       +E G L I 
Sbjct: 520  ITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDGRDLQELGDSDKYFIEDGRLVIH 579

Query: 276  DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
             + ++D G Y+C A  +L   +    L V                 G   +    A+SD 
Sbjct: 580  SLDYSDQGNYSCVASTELDMVESRAQLLV----------------VGSPGSVPRLALSDL 623

Query: 336  SL-KLSIVWLRGS---------EPIDFESEPRFVQSND-YSLTVTKSSELDSG------- 377
             L K S V L  S         E  D E E + +     YSL     ++  +        
Sbjct: 624  HLLKQSQVRLSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYV 683

Query: 378  QYTCRAQTELDFIEAQ---ATLTVQVPLEAPSNFTLI---QVIDAKKAVVSWNPVSPQSL 431
             YT R      +   +    + TV  P  AP    +    +  +    V++W P+     
Sbjct: 684  HYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVNVKGEGNETTNMVITWKPLRWMDW 743

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                  Y+VQ W  +   G  +E IV+      +    FVP      +V A N    GP 
Sbjct: 744  NAPQVQYRVQ-WRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYE---IKVQAVNRQGKGPE 799

Query: 492  SEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVKG 546
             ++    + E  P  V  LE I  L SSA  +KW  V   Q  G L GY + Y  +  + 
Sbjct: 800  PQVTIGYSGEDYPQAVPELEGIEILNSSAVLVKWRPVDLVQVKGHLRGYNVTYWREGSQR 859

Query: 547  TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF---K 603
                    R   +    TTS  L+GL P + Y + +  +   G G  S++ F  P     
Sbjct: 860  KHSKRHTHRDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGLGPASEFTFSTPEGVPG 919

Query: 604  NPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSEL 663
            +P+ +     +  +L + W   P + HN     Y + +R  + G         + R  EL
Sbjct: 920  HPEALHVECQSNTSLRLHW--QPPLSHNGVLTGYVLSYRPLDEGGKGQLS--FNLRDPEL 975

Query: 664  VLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
               N     P   Y  ++  T  E  GE  +RE
Sbjct: 976  RTHNLTDLSPHLRYRFQLQATTKEGPGEAIVRE 1008



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 160/389 (41%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS----QGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P D +     Q  +  S  I   + 
Sbjct: 43  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKDELGVTVYQSPHSGSFTITGNNS 102

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P      E E+V   C  
Sbjct: 103 NFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPV--EVEEGESVVLPCHP 160

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 161 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 218

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 219 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 278

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++ +V   D GEY C A N LG+A+    +TV+   +   +
Sbjct: 279 PSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSARHDYYVTVEAAPYWLHK 338

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  I W     P++  ++ +  +    +L ++    
Sbjct: 339 PQSHLYGPGETARLDCQVQGRP--QPEITWRINGIPVEELAKDQKYRIQRGALILSNVQP 396

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A      + A A +  VQ+P
Sbjct: 397 SDTMVTQCEAGNRHGLLLANAYIYVVQLP 425


>gi|432859188|ref|XP_004069056.1| PREDICTED: neurofascin-like [Oryzias latipes]
          Length = 1358

 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 136/455 (29%), Positives = 216/455 (47%), Gaps = 14/455 (3%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           ++ LR++++ L CI  G P P   W K G  + P+ ++   N  K L +  V   D G Y
Sbjct: 282 KMVLRDQELLLECIAAGLPTPSITWFKKGAEL-PAKKVKFENNNKVLRVLSVSEEDAGDY 340

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C  +N VG  + ++I + V AAPY+  +P  +  A +E     C+A+G P+P I W  +
Sbjct: 341 VCTANNNVGMIR-HTISVDVKAAPYWLDKPTNLILAPDEGGRLVCRANGKPKPTIQWFVD 399

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           G+P+  +     R++  + I   ++    +  Y CNA+N  GY+  + +V+VL  +P + 
Sbjct: 400 GEPLEGSNSVRHREMLGDTIIFRSVEIGSSAVYQCNASNQHGYLLANAFVSVLDLSPMML 459

Query: 223 EAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVA 278
             PK++    ++     L C  FG+P PE  W  N +   L GG Y     G L+I    
Sbjct: 460 -GPKNQLIQVIENNRTFLDCPFFGSPLPEHRWFKNGQGSGLDGGHYRTYLNGSLEIKRTR 518

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
             D G YTC A N LG A+    L VKE T I   P       G +A F C   SDP+L 
Sbjct: 519 REDEGTYTCVASNMLGKAENQVHLEVKEPTRIVQAPVHQSAVRGTTARFDCKVNSDPTLP 578

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           +++ W +  +P+D     R  +  D SLT++  +E D+G YTC A++ +D     A LTV
Sbjct: 579 VTVTWTKDDKPLDLRW--RLKKDKD-SLTISNINEGDAGTYTCMAKSAIDQDSVSARLTV 635

Query: 399 QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVN 458
               + P +  L     A+   ++W P +  +      G+ VQ   ++   G  + L   
Sbjct: 636 LGRPDPPMDLDLSDPA-ARSVRLTWIPGNDHN--SPITGFLVQFEEDRWEPGRWQNLTSF 692

Query: 459 KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
            G+  +  V +  P      RV+A N      PS+
Sbjct: 693 SGDLNSV-VLQLSPYVNYQFRVIAINSVGQSDPSQ 726



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 138/648 (21%), Positives = 262/648 (40%), Gaps = 66/648 (10%)

Query: 64  QTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGEAKSYS 117
           Q  W    + PI  ++R+S G  G  L   +V   D +  Y+C      ++ + +   +S
Sbjct: 198 QIFWMDSNMNPIPQNERVSMGQNG-DLYFSNVHLQDAERDYSCNARFNFTHTIQQKNPFS 256

Query: 118 IDLSVL-----AAPYFTVEPEFINAAE----EETVTFECKASGLPEPEIHWVHNGKPISQ 168
           + +        + P F + P  I +++    ++ +  EC A+GLP P I W   G  +  
Sbjct: 257 LRVQTSRRVAESRPSF-LTPSGIQSSKMVLRDQELLLECIAAGLPTPSITWFKKGAEL-- 313

Query: 169 APPNPRRKVGPNR--ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
             P  + K   N   + + ++ + D G+Y C A N++G +   + V+V A AP   + P 
Sbjct: 314 --PAKKVKFENNNKVLRVLSVSEEDAGDYVCTANNNVGMIRHTISVDVKA-APYWLDKPT 370

Query: 227 DEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETGDLKITDVAFADSG 283
           +      +   L CR  G PKP + W  + + L G    R+  +    +    V    S 
Sbjct: 371 NLILAPDEGGRLVCRANGKPKPTIQWFVDGEPLEGSNSVRHREMLGDTIIFRSVEIGSSA 430

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA--GQSATFRCNAVSDPSLKLSI 341
            Y C A N+ G    +  ++V + + +   P++  ++          C     P  +   
Sbjct: 431 VYQCNASNQHGYLLANAFVSVLDLSPMMLGPKNQLIQVIENNRTFLDCPFFGSPLPEHR- 489

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            W +  +    +        N  SL + ++   D G YTC A   L   E Q  L V+ P
Sbjct: 490 -WFKNGQGSGLDGGHYRTYLNG-SLEIKRTRREDEGTYTCVASNMLGKAENQVHLEVKEP 547

Query: 402 ---LEAPSNFTLIQVIDAK-KAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR-ELI 456
              ++AP + + ++   A+    V+ +P  P ++          TWT+ D    +R  L 
Sbjct: 548 TRIVQAPVHQSAVRGTTARFDCKVNSDPTLPVTV----------TWTKDDKPLDLRWRLK 597

Query: 457 VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLG 516
            +K   T + +++    +       A +         + + +T  G P     L+     
Sbjct: 598 KDKDSLTISNINEGDAGTYTCMAKSAIDQ------DSVSARLTVLGRPDPPMDLDLSDPA 651

Query: 517 SSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPST 576
           + +  L W+     N  + G+ ++++  +  + G       +  D  +   +L+   P  
Sbjct: 652 ARSVRLTWIPGNDHNSPITGFLVQFEEDRW-EPGRWQNLTSFSGDLNSVVLQLS---PYV 707

Query: 577 KYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEH 630
            Y+  +      G    S      K     P   P  + G G+  +N+ I+W  + ++E 
Sbjct: 708 NYQFRVIAINSVGQSDPSQPSPRYKTSGAAPDAIPRGLRGWGTRNDNMEITWEPLQDLER 767

Query: 631 NAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           N P+ +Y ++WRR ++GE W+         S  V+ N  T+ PYEI++
Sbjct: 768 NGPNLQYHVWWRRKDSGEQWDSGTT---PSSNYVVQNTDTYVPYEIRI 812



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 15/200 (7%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGS---IRELIV 457
            P E P    +  V D+ KA V W  V+  S+RG F+ Y++  ++ K        ++E   
Sbjct: 836  PTEPPRQLQVSNV-DSTKAQVKWKAVNMSSIRGEFKEYRLY-YSRKSSLVPGLVVKEETK 893

Query: 458  NKGESTTTE-----VDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA 512
            NKG  TT +     +   VP SK    ++  N  + GPPS ++ F T EGVP   +  + 
Sbjct: 894  NKGFYTTADEPSGILTGLVPFSKYKMSMVVANNRFEGPPSNMVEFTTREGVPDAPKFFKI 953

Query: 513  IPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTK-VGPLLERLPYISDPTTTSAKLAG 571
                    YL+W +P +PNG+L+GYK++YQ+V  ++   P +  +P+      T   L  
Sbjct: 954  NRRTLDTLYLEWDRPLEPNGILIGYKLEYQAVNSSRPSSPTILTIPH----NVTKHTLRL 1009

Query: 572  LEPSTKYRIHLAGYTKAGDG 591
             + ST+Y++ L+  T+ G G
Sbjct: 1010 PDRSTRYKLFLSALTQQGSG 1029



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 94/394 (23%), Positives = 155/394 (39%), Gaps = 33/394 (8%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSD--RISQGNYGKSLIIKHVEFSD----QGSYTCEVSN 108
           C   G P P  +W K+G   N  +  R++   +  +L I           +G Y C  SN
Sbjct: 89  CEAKGNPTPTFLWRKNGKFFNFGNDPRVTMQKHSGTLKIGFRPGERPEDYEGEYQCFASN 148

Query: 109 GVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKASGLPEPEIHWVH-NGK 164
             G A S  I L V  AP +    +EP  +       +       GLP P+I W+  N  
Sbjct: 149 DHGVAMSNKILLRVSKAPLWPKEILEPRVVTEG-SPLILPCNPPPGLPPPQIFWMDSNMN 207

Query: 165 PISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNATNSLGYVY--KDVYVNVLAHAPE 220
           PI   P N R  +G N  +   N+   D   +Y CNA  +  +    K+ +   +  +  
Sbjct: 208 PI---PQNERVSMGQNGDLYFSNVHLQDAERDYSCNARFNFTHTIQQKNPFSLRVQTSRR 264

Query: 221 ITEAPKDEYTVDG----------KTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETG 270
           + E+     T  G          + ++L C   G P P + W     EL   +       
Sbjct: 265 VAESRPSFLTPSGIQSSKMVLRDQELLLECIAAGLPTPSITWFKKGAELPAKKVKFENNN 324

Query: 271 D-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
             L++  V+  D+G+Y C A N +G  + + S+ VK   +  D+P +  +   +     C
Sbjct: 325 KVLRVLSVSEEDAGDYVCTANNNVGMIRHTISVDVKAAPYWLDKPTNLILAPDEGGRLVC 384

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   P  K +I W    EP++  +  R  +    ++         S  Y C A  +  +
Sbjct: 385 RANGKP--KPTIQWFVDGEPLEGSNSVRHREMLGDTIIFRSVEIGSSAVYQCNASNQHGY 442

Query: 390 IEAQATLTV--QVPLEAPSNFTLIQVIDAKKAVV 421
           + A A ++V    P+       LIQVI+  +  +
Sbjct: 443 LLANAFVSVLDLSPMMLGPKNQLIQVIENNRTFL 476



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 123/301 (40%), Gaps = 40/301 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE-----NLRKSD-TGN 194
           + +  EC+A G P P   W  NGK  +    +PR  +  +  T++       R  D  G 
Sbjct: 83  DNIIIECEAKGNPTPTFLWRKNGKFFNFG-NDPRVTMQKHSGTLKIGFRPGERPEDYEGE 141

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAP----EITEAPKDEYTVDGKTVVL-TCRVFGAPKPE 249
           Y C A+N  G    +  +  ++ AP    EI E        +G  ++L      G P P+
Sbjct: 142 YQCFASNDHGVAMSNKILLRVSKAPLWPKEILEP---RVVTEGSPLILPCNPPPGLPPPQ 198

Query: 250 VNWIHNQKELT--GGRYTILETGDLKITDVAFADS-GEYTCFAR-NKLGTAQGSG--SLT 303
           + W+ +         R ++ + GDL  ++V   D+  +Y+C AR N   T Q     SL 
Sbjct: 199 IFWMDSNMNPIPQNERVSMGQNGDLYFSNVHLQDAERDYSCNARFNFTHTIQQKNPFSLR 258

Query: 304 VKEHTHITDQPEDYEVEAG----------QSATFRCNAVSDPSLKLSIVWL-RGSEPIDF 352
           V+    + +    +   +G          Q     C A   P+   SI W  +G+E    
Sbjct: 259 VQTSRRVAESRPSFLTPSGIQSSKMVLRDQELLLECIAAGLPT--PSITWFKKGAE---L 313

Query: 353 ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFT 409
            ++    ++N+  L V   SE D+G Y C A   +  I    ++ V+     L+ P+N  
Sbjct: 314 PAKKVKFENNNKVLRVLSVSEEDAGDYVCTANNNVGMIRHTISVDVKAAPYWLDKPTNLI 373

Query: 410 L 410
           L
Sbjct: 374 L 374


>gi|344236690|gb|EGV92793.1| Neurofascin [Cricetulus griseus]
          Length = 1279

 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 131/383 (34%), Positives = 187/383 (48%), Gaps = 33/383 (8%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVG- 111
           + C    +P P   W K G  + PSD+    N+ K+L I +V   D G Y C  SN +G 
Sbjct: 274 ICCASEPSPTPDIAWYKKGGDL-PSDKTKFENFNKALRITNVSEEDSGEYFCLASNKMGS 332

Query: 112 ---------EAKSYSIDLSVL-AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVH 161
                    +A +  I L  L AAPY+  EP+ +  A  E     C+A+G P+P + W+ 
Sbjct: 333 IRHTISVRVKACAIYICLPCLSAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMV 392

Query: 162 NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           NG+P+  APPNP R+V  + I   + + S    Y CN +N  GY+  + +V+VL   P +
Sbjct: 393 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 452

Query: 222 TEAPKDEY--TVDGKTVVLTCRVFGAPKPE--------------VNWIHNQ-KELTGGRY 264
             +P+++    +      L C  FG+P P               V + + Q   L GG Y
Sbjct: 453 L-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRCPFSVCCVRCSIVRFKNGQGSNLDGGNY 511

Query: 265 TILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
            + E G L+I  +   D G YTC A N LG A+    L VK+ T I   PED  V+ G +
Sbjct: 512 HVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVVKRGTT 571

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
               C    DPSLKL++ WL+  EP+   +    ++  D SLT+   +E D G YTC A 
Sbjct: 572 VQLECRVKHDPSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCMAS 628

Query: 385 TELDFIEAQATLTVQVPLEAPSN 407
           TELD   A+A LTV      P+N
Sbjct: 629 TELDQDLAKAYLTVLADQATPTN 651



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 159/704 (22%), Positives = 265/704 (37%), Gaps = 114/704 (16%)

Query: 59  GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
           G P P   W    + PI    R+SQG+ G  L   +V   D Q  Y+C      ++ + +
Sbjct: 161 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 113 AKSYSIDLSVLAAPY----FTVEPEFINAAEEETV-------------------TFECKA 149
              +++ + +   PY        P+  + A+E  V                      C +
Sbjct: 220 KNPFTLKV-LTNNPYNDSSLRNHPDIYSVAKECLVFLGQPSDSAFAGFGKAAGPIICCAS 278

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYK 208
              P P+I W   G  +   P +  +    N+ + I N+ + D+G Y C A+N +G +  
Sbjct: 279 EPSPTPDIAWYKKGGDL---PSDKTKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRH 335

Query: 209 DVYVNV-----------LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK 257
            + V V           L+ AP   + PK+     G+   L CR  G PKP V W+ N +
Sbjct: 336 TISVRVKACAIYICLPCLSAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGE 395

Query: 258 ELTGG-----RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD 312
            L        R    +T  +   D   +    Y C   N+ G    +  ++V +      
Sbjct: 396 PLQSAPPNPNREVAGDT--IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRML 453

Query: 313 QPEDYEVE--------------AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF 358
            P +  +                    T RC   S   ++ SIV  +  +  + +     
Sbjct: 454 SPRNQLIRVILYNRTRLDCPFFGSPIPTLRC-PFSVCCVRCSIVRFKNGQGSNLDGGNYH 512

Query: 359 VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKK 418
           V  N  SL +    + D G YTC A   L   E Q  L V+ P       T I  +   +
Sbjct: 513 VYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP-------TRIYRMPEDQ 564

Query: 419 AVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIRELIVNKGESTT------------- 464
            V     V  +    H    K+  +W + D    I   +  + +S T             
Sbjct: 565 VVKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGSYT 624

Query: 465 ----TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
               TE+D+ +  +K +  VLA       P + + +   P+G P   + LE   L   + 
Sbjct: 625 CMASTELDQDL--AKAYLTVLADQAT---PTNRLAAL--PKGRPDRPRDLELTDLAERSV 677

Query: 521 YLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRI 580
            L W+  +  N  +  Y I+++  +  + G   +   +   P + ++ +  L P   Y+ 
Sbjct: 678 RLTWIPGDDNNSPITDYVIQFEEDQ-FQPGVWHDHSKF---PGSVNSAVLHLSPYVNYQF 733

Query: 581 HLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPH 634
            +    + G    S      +     P  NP +V+G G+  NN+ I+WT M       P+
Sbjct: 734 RVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPN 793

Query: 635 FKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            +Y + WRR  T E WN  +V  W  S  V+   P + PYEI+V
Sbjct: 794 LRYIVKWRRRETRETWN--NVTVW-GSRYVVGQTPVYVPYEIRV 834



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 121/295 (41%), Gaps = 39/295 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
           + +  EC+A G P P  HW  N +   I++ P  + RR+ G   I   +  + +   G Y
Sbjct: 51  DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 110

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A N  G    +     ++ +P   +   D   V +G  + L C    G P P + W+
Sbjct: 111 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 170

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
            +  E      R +    GDL  ++V   D   +Y+C AR     T Q     T+K  T+
Sbjct: 171 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTN 230

Query: 310 -------ITDQPEDYEVEA-----------------GQSATFRCNAVSDPSLKLSIVWLR 345
                  + + P+ Y V                   G++A       S+PS    I W +
Sbjct: 231 NPYNDSSLRNHPDIYSVAKECLVFLGQPSDSAFAGFGKAAGPIICCASEPSPTPDIAWYK 290

Query: 346 GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
                D  S+    ++ + +L +T  SE DSG+Y C A  ++  I  + T++V+V
Sbjct: 291 KGG--DLPSDKTKFENFNKALRITNVSEEDSGEYFCLASNKMGSI--RHTISVRV 341



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 59/139 (42%), Gaps = 12/139 (8%)

Query: 379 YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           Y  R Q E DF +     T+        P  AP+    I+V+++    + WN V   +++
Sbjct: 830 YEIRVQAENDFGKGPEPDTIIGYSGEDYPRAAPTEVK-IRVMNSTAISLQWNRVYSDTVQ 888

Query: 433 GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
           G  R Y+   W E     ++     R+     G+     V +  P S     ++  NG  
Sbjct: 889 GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVARLFPYSNYKLEMVVVNGRG 948

Query: 488 NGPPSEIISFVTPEGVPGT 506
           +GP SE   F TPEGV GT
Sbjct: 949 DGPRSETKEFTTPEGVNGT 967



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 97/245 (39%), Gaps = 47/245 (19%)

Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILETG 270
           L   P IT+    ++ VD +  +++ C   G P P  +W  N +        R ++    
Sbjct: 31  LTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 90

Query: 271 DLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE--- 318
              + D           GEY CFARNK GTA     L+ +    ++  P    E+ +   
Sbjct: 91  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDPVV 145

Query: 319 VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELD- 375
           V+ G   T +CN    P L   ++ W+  S EPI    + R  Q ++  L  +     D 
Sbjct: 146 VQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQDM 201

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
              Y+C A+          T T+Q      + FTL         V++ NP +  SLR H 
Sbjct: 202 QTDYSCNARFHF-------THTIQ----QKNPFTL--------KVLTNNPYNDSSLRNHP 242

Query: 436 RGYKV 440
             Y V
Sbjct: 243 DIYSV 247


>gi|348537072|ref|XP_003456019.1| PREDICTED: protein sidekick-1-like [Oreochromis niloticus]
          Length = 2128

 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 180/620 (29%), Positives = 266/620 (42%), Gaps = 62/620 (10%)

Query: 53  LFCIFGGTPLPQTI--WSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS--N 108
           L CI    P+ + +  W +DG       R+S G   + LII     SD G Y CE S  N
Sbjct: 219 LECIANARPVDRLLVSWKRDG------RRLSSG---QRLIIPAPTSSDTGLYVCEASFSN 269

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPEPEIHWVHNGKPIS 167
              +       L+V+  P  T +P+  I    +      C A+G+P+P I W  +  P+S
Sbjct: 270 STAKPVEAKAHLTVMEPPSLTAQPKSKIFGELDRNAEIPCLAAGVPQPRIEWYKDTVPLS 329

Query: 168 QAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
           +   NPR KV   N +T+  ++  D G + C A N  G       + V + AP     P 
Sbjct: 330 KLA-NPRYKVSAANGLTVRRVQPGDGGIFQCFARNPAGEAQAQTQLFVSSVAPTFASPPS 388

Query: 227 DEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGR-----YTILETGDLKITDVAFAD 281
           D+   DG T + TC+  GAPKP + W    + L  G      +T+L++G L++  V+F D
Sbjct: 389 DQTVTDGNTALFTCQTNGAPKPAITWRKGSQVLASGSVQVPSFTLLQSGGLQVQPVSFQD 448

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           SGEYTC A N  GT   + +LTV   T I+  P D  V  G +AT +C+A  DP + +S 
Sbjct: 449 SGEYTCIASNTEGTINATATLTVWNRTVISVPPTDQRVIKGTTATLKCDATHDPRISISY 508

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            W R   P+   S  R V      LT++++   D G YTC   ++       A L V   
Sbjct: 509 KWERSGMPVLPTSGGR-VSVRQGLLTISQTWSGDIGDYTCTVTSQAGNDSRPARLEVIEL 567

Query: 402 LEAPSNFTL-IQVIDAKKAVVSWNPVSPQSLRGHFRG-----YKVQTWTEKDGEGSIREL 455
             +P + T  +   D++  ++SW       LR  F G     Y V   +E +    +   
Sbjct: 568 PHSPRSLTARLNDSDSRSVLLSW-------LR-PFDGNSPLLYYVLELSENNSPWKVYLS 619

Query: 456 IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGT-VQSLEAI 513
            V+    T   V    PA     R+ A N    G  S E    +  E  P    +++ A 
Sbjct: 620 EVDPA-VTKVSVGGLTPARTYQFRLCAVNQVGRGQYSAETQRLMLREEAPSAPPKNIVAS 678

Query: 514 PLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLP------YISDPTTT 565
              + +  ++W  P +P  NGVL GY ++Y+          L  LP       IS P T 
Sbjct: 679 GRTNQSIMVQWQPPPEPQLNGVLRGYVLRYR----------LAGLPGDYQEKNISSPETN 728

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLVI 620
              L  L   T+Y+I +A YT AG G  S       L  VP   P  V+        +  
Sbjct: 729 YCLLKDLIIWTQYQIQVAAYTGAGLGVYSSPVTEYTLQGVPTAPPQEVQVVAINSTTIQF 788

Query: 621 SWTAMPEIEHNAPHFKYRIF 640
           +W   P+   N  +  Y++ 
Sbjct: 789 TWNPPPQQFINGINQGYKLL 808



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 161/661 (24%), Positives = 257/661 (38%), Gaps = 84/661 (12%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV-GE---AKSY 116
           P P   W KDG  I P++RI+       L++     +D G Y  E  N + GE   + + 
Sbjct: 126 PQPLVTWYKDGHKIIPNNRITI-TLDNQLVVLATAATDAGRYHVEAVNELTGETVTSPAV 184

Query: 117 SIDLSVLAAPYFTVEPEFINAAEEETVT------FECKASGLPEPE--IHWVHNGKPISQ 168
            + +S  + P   V P  +   ++ TV        EC A+  P     + W  +G+ +S 
Sbjct: 185 YLSISGESDPSEPVVPAIVIGPKDTTVVAGNEAILECIANARPVDRLLVSWKRDGRRLSS 244

Query: 169 APPNPRRKVGPNRITIENLRKSDTGNYGCNA--TNSLGY-VYKDVYVNVLAHAPEITEAP 225
                       R+ I     SDTG Y C A  +NS    V    ++ V+   P +T  P
Sbjct: 245 G----------QRLIIPAPTSSDTGLYVCEASFSNSTAKPVEAKAHLTVM-EPPSLTAQP 293

Query: 226 KDE-YTVDGKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITDVAFAD 281
           K + +    +   + C   G P+P + W  +     +L   RY +     L +  V   D
Sbjct: 294 KSKIFGELDRNAEIPCLAAGVPQPRIEWYKDTVPLSKLANPRYKVSAANGLTVRRVQPGD 353

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKE-HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            G + CFARN  G AQ    L V          P D  V  G +A F C     P  K +
Sbjct: 354 GGIFQCFARNPAGEAQAQTQLFVSSVAPTFASPPSDQTVTDGNTALFTCQTNGAP--KPA 411

Query: 341 IVWLRGSEPIDFES--EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W +GS+ +   S   P F       L V   S  DSG+YTC A      I A ATLTV
Sbjct: 412 ITWRKGSQVLASGSVQVPSFTLLQSGGLQVQPVSFQDSGEYTCIASNTEGTINATATLTV 471

Query: 399 QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD---------GE 449
                   N T+I V    + V+     + +    H     +    E+          G 
Sbjct: 472 W-------NRTVISVPPTDQRVIKGTTATLKCDATHDPRISISYKWERSGMPVLPTSGGR 524

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGTVQ 508
            S+R+ ++   ++ + ++  +         V +  G  + P   E+I        P + +
Sbjct: 525 VSVRQGLLTISQTWSGDIGDYT------CTVTSQAGNDSRPARLEVIEL------PHSPR 572

Query: 509 SLEAI--PLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERLPYIS--DPT 563
           SL A      S +  L W++P   N  L+ Y ++        KV        Y+S  DP 
Sbjct: 573 SLTARLNDSDSRSVLLSWLRPFDGNSPLLYYVLELSENNSPWKV--------YLSEVDPA 624

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDG---AESKYLFY---VPFKNPDNVEGRGSTPNN 617
            T   + GL P+  Y+  L    + G G   AE++ L      P   P N+   G T  +
Sbjct: 625 VTKVSVGGLTPARTYQFRLCAVNQVGRGQYSAETQRLMLREEAPSAPPKNIVASGRTNQS 684

Query: 618 LVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIK 677
           +++ W   PE + N     Y + +R       + + ++     +  +L +   +  Y+I+
Sbjct: 685 IMVQWQPPPEPQLNGVLRGYVLRYRLAGLPGDYQEKNISSPETNYCLLKDLIIWTQYQIQ 744

Query: 678 V 678
           V
Sbjct: 745 V 745



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 143/603 (23%), Positives = 231/603 (38%), Gaps = 60/603 (9%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSNGV 110
           C   G P P   W K G  +  S  +   ++       L ++ V F D G YTC  SN  
Sbjct: 402 CQTNGAPKPAITWRK-GSQVLASGSVQVPSFTLLQSGGLQVQPVSFQDSGEYTCIASNTE 460

Query: 111 GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI--HWVHNGKPISQ 168
           G   + +  L+V      +V P      +  T T +C A+  P   I   W  +G P+  
Sbjct: 461 GTINA-TATLTVWNRTVISVPPTDQRVIKGTTATLKCDATHDPRISISYKWERSGMPVLP 519

Query: 169 APPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAPEITEAPK 226
                R  V    +TI      D G+Y C  T+  G   +   + V  L H+P    A  
Sbjct: 520 TSGG-RVSVRQGLLTISQTWSGDIGDYTCTVTSQAGNDSRPARLEVIELPHSPRSLTARL 578

Query: 227 DEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAF-----A 280
           ++   D ++V+L+  R F    P + ++    E        L   D  +T V+      A
Sbjct: 579 NDS--DSRSVLLSWLRPFDGNSPLLYYVLELSENNSPWKVYLSEVDPAVTKVSVGGLTPA 636

Query: 281 DSGEYTCFARNKLGTAQGSGS---LTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
            + ++   A N++G  Q S     L ++E    +  P++       + +        P  
Sbjct: 637 RTYQFRLCAVNQVGRGQYSAETQRLMLREEAP-SAPPKNIVASGRTNQSIMVQWQPPPEP 695

Query: 338 KLSIVWLRG--------SEPIDFESEPRFVQSNDY----SLTVTKSSELDSGQYTCRAQT 385
           +L+ V LRG          P D++ +       +Y     L +    ++    YT     
Sbjct: 696 QLNGV-LRGYVLRYRLAGLPGDYQEKNISSPETNYCLLKDLIIWTQYQIQVAAYTGAG-- 752

Query: 386 ELDFIEAQAT-LTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWT 444
            L    +  T  T+Q    AP     +  I++     +WNP   Q + G  +GYK+  W 
Sbjct: 753 -LGVYSSPVTEYTLQGVPTAPPQEVQVVAINSTTIQFTWNPPPQQFINGINQGYKLLVWP 811

Query: 445 EKDGEGSIRELIVNKGEST--TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 502
           E+  E      I     S+  T  V      +  +   L F    +GP S      T E 
Sbjct: 812 EQSPEDVTIVTITPDYPSSRHTGLVSGLKKFTWYYGSTLCFTTPGDGPRSPPTLVQTHED 871

Query: 503 VPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYIS 560
            PG V+ L    +  ++  + W +PE  NG++ GY + ++  +V+ ++    L       
Sbjct: 872 TPGRVRRLSFTEILDTSLRVSWAEPEDKNGIITGYMLWWEVPNVESSREERSLSN----- 926

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA--ESKYLFYVPFKNPDNVEGRGSTPNNL 618
             +T   +L GL  +T Y I +A  T AG G    S     VP + P         P+NL
Sbjct: 927 --STLQYQLTGLTSTTVYTIQVAALTAAGRGVVTSSTISTGVPPELP-------GAPSNL 977

Query: 619 VIS 621
           VIS
Sbjct: 978 VIS 980



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  +P N T  + + + K ++ W+ +      G   GYKV  +++KD EG     +   
Sbjct: 1177 VPSGSPVNVT-AEAVSSSKILLMWSALPQSQKNGVILGYKV-LYSKKDSEGPPSVQVAEG 1234

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
              S +  +      +    +VLA+    +GPPS  I   T E VPG    +    +  S+
Sbjct: 1235 EGSVSLLLGALQKYTVYVLQVLAYTRMGDGPPSNPILLRTKEDVPGPPVRMVFPEVRLSS 1294

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P  PNG+++GY+I Y+
Sbjct: 1295 VRVVWQPPASPNGIILGYQISYR 1317



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/279 (22%), Positives = 102/279 (36%), Gaps = 33/279 (11%)

Query: 139 EEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCN 198
           E   +   C A G    +  W  N   I+   P         R+++ +L+++D G Y C 
Sbjct: 25  EGNRLMLTCLAGGSWPLQYRWTLNNSNITDWTPQ-------YRLSMPSLKRTDAGLYQCM 77

Query: 199 ATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA-PKPEVNWIHN-Q 256
             N +G V        +A     +   + +    G+  ++      + P+P V W  +  
Sbjct: 78  VRNRMGAVIHRRTEVQVAFLGNFSAEEQRKTVTQGRAALINPPPLASFPQPLVTWYKDGH 137

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLG-----------TAQGSGSLTVK 305
           K +   R TI     L +   A  D+G Y   A N+L            +  G    +  
Sbjct: 138 KIIPNNRITITLDNQLVVLATAATDAGRYHVEAVNELTGETVTSPAVYLSISGESDPSEP 197

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
               I   P+D  V AG  A   C A + P  +L + W R    +          S+   
Sbjct: 198 VVPAIVIGPKDTTVVAGNEAILECIANARPVDRLLVSWKRDGRRL----------SSGQR 247

Query: 366 LTVTKSSELDSGQYTCRA---QTELDFIEAQATLTVQVP 401
           L +   +  D+G Y C A    +    +EA+A LTV  P
Sbjct: 248 LIIPAPTSSDTGLYVCEASFSNSTAKPVEAKAHLTVMEP 286



 Score = 46.2 bits (108), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 2/142 (1%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP + T +  +      V+W+    ++  G  +GYK+  W E+D +    ++ V   
Sbjct: 1601 PSVAPQSIT-VSAVSPSTLEVTWDTPPLETQNGLIQGYKIHYW-ERDQQNQSEKVKVIFV 1658

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
              T   +      +     + AFN A +GPPS+     T    P     L    +   + 
Sbjct: 1659 PDTRVHLTNLSSYTSYLVTLTAFNTAGDGPPSDPRGARTLPSAPSQPSLLSFSEVTGGSV 1718

Query: 521  YLKWVKPEQPNGVLMGYKIKYQ 542
             + W  P  PNG + GY++ Y+
Sbjct: 1719 NVSWGAPLSPNGQVEGYRVIYE 1740



 Score = 45.8 bits (107), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 88/232 (37%), Gaps = 37/232 (15%)

Query: 391  EAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV--------- 440
            E +A  T+Q VP E P   + ++       +V W   S  S+ G   GY++         
Sbjct: 1468 ETEAATTLQDVPNEPPVILS-VKPTTTTSVLVHWKRPSDDSVNGVLTGYRLYYRELPVNA 1526

Query: 441  QTWTEKD---GEGSIRELIVNKGESTTTEVDKF----VPASKNFARVLAFNGAYN----G 489
             T TE +    + +   LI  K    T   D      +   K F R      +YN     
Sbjct: 1527 STLTEAEVQTTKNNTSALITTKSTFKTVSSDSLTEFELTQLKKFRRYQIVMTSYNIIGES 1586

Query: 490  PPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKY----Q 542
            PPS  +     E  P    QS+    +  S   + W  P  E  NG++ GYKI Y    Q
Sbjct: 1587 PPSNPVEVSVGEAAPSVAPQSITVSAVSPSTLEVTWDTPPLETQNGLIQGYKIHYWERDQ 1646

Query: 543  SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
              +  KV     ++ ++ D   T   L  L   T Y + L  +  AGDG  S
Sbjct: 1647 QNQSEKV-----KVIFVPD---TRVHLTNLSSYTSYLVTLTAFNTAGDGPPS 1690



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 64/287 (22%), Positives = 118/287 (41%), Gaps = 57/287 (19%)

Query: 394  ATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG 450
            +T++  VP E   APSN  +I  I  + A V + P  P       R + V+     DG+ 
Sbjct: 960  STISTGVPPELPGAPSNL-VISNISPRTATVRFRP-GPDGKTAISR-WIVEGQVRDDGKE 1016

Query: 451  SIRELIV---NKGESTTTEVDKFVPASKNFARVLAFNGAYNGP---PSEIISFV--TPEG 502
               +++    N+ ++ T E+    P ++   R+   N   + P   PS +I  +   P+ 
Sbjct: 1017 EEWKVVYQKDNQPDADTLEIPDLTPFTQYRFRMQQVNIVGSSPMSAPSRLIQTLQAAPDT 1076

Query: 503  VPGTVQSLEAIPLGSSAFYLKWVKP-------EQPNGVLMGYKIKY-----------QSV 544
             P  +  L A     ++    W KP         P  V  GY+++            + V
Sbjct: 1077 HPSDLSLLSAT---QTSLRFSW-KPLSESEYNSSPETV--GYRLRVSRTDGQGENRNEDV 1130

Query: 545  KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY----- 599
            KGT                T+ A L GL P T+Y++ +  +   G G  S+ +       
Sbjct: 1131 KGTGA--------------TSEATLEGLNPFTQYQVQIQAFNSIGPGPWSQTVAAQTAES 1176

Query: 600  VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
            VP  +P NV     + + +++ W+A+P+ + N     Y++ + + ++
Sbjct: 1177 VPSGSPVNVTAEAVSSSKILLMWSALPQSQKNGVILGYKVLYSKKDS 1223


>gi|403306869|ref|XP_003943942.1| PREDICTED: neural cell adhesion molecule L1 isoform 3 [Saimiri
           boliviensis boliviensis]
          Length = 1243

 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 193/718 (26%), Positives = 307/718 (42%), Gaps = 74/718 (10%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L + +V   D G Y 
Sbjct: 248 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLNVGEEDDGEYR 306

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ +   ++V AAPY+  +P+       ET   +C+  G P+PEI W  NG
Sbjct: 307 CLAENSLGSAR-HDYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEITWRING 365

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 366 IPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEAGNRHGLLLANAYIYVVQLPAKILT 425

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 426 ADNQTYMAVRGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 485

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L +K+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 486 DTGRYFCQAANDQNNVTIVANLQIKDATQITQGPRSTIEKKGSRVTFTCQASFDPSLQPS 545

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 546 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 603

Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
                 VP  A S+  L++     +  +SW+P    +       Y ++   ++       
Sbjct: 604 VGSPGSVPWLAVSDLHLLK---QSQVRLSWSPAEDHN--APIEKYDIEFEDKEMAPEKWY 658

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTV----- 507
            L    G  T+T + K  P      RV A N    G PS +  + VTPE  P        
Sbjct: 659 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVNVK 717

Query: 508 -QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
            +  E   +  +   L+W+    P    + Y+++++  +GT+ GP  E++  +SDP    
Sbjct: 718 GEGNETTNMVITWKPLRWMDWNAPQ---VQYRVQWRP-QGTR-GPWQEQI--VSDPFLVV 770

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
           +  +   P   Y I +    + G G E +    + +   D  +              A+P
Sbjct: 771 SNTSTFVP---YEIKVQAVNRQGKGPEPQ--VTIGYSGEDYPQ--------------AVP 811

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVL-DWRQSELVLANQPTFQPYEIKVVQTWTEK 685
           E+E                  E  N   VL  WR  +L    +   + Y +   +  +++
Sbjct: 812 ELE----------------GIEILNSSAVLVKWRPVDLAQV-KGHLRGYNVTYWREGSQR 854

Query: 686 --DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                 + R+ +V    +T+  +    P S     V AFNG   GP SE  +F TPEG
Sbjct: 855 KHSKRHTHRDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGLGPASE-FTFSTPEG 911



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 174/693 (25%), Positives = 265/693 (38%), Gaps = 88/693 (12%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI +G    +LI+ +V+ SD     CE  
Sbjct: 347  LDCQVQGRPQPEITWRINGIPVEELAKDQKYRIQRG----ALILSNVQPSDTMVTQCEAG 402

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + +   A    T    CKA G P P + W+  +G 
Sbjct: 403  NRHGLLLANAY-IYVVQLPAKILTADNQTYMAVRGSTAYLLCKAFGAPVPSVQWLDEDGT 461

Query: 165  PISQAP---PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q     P     +G     I +L+ +DTG Y C A N    V   +  N+ +  A +
Sbjct: 462  TVLQDERFFPYANGTLG-----IRDLQANDTGRYFCQAANDQNNV--TIVANLQIKDATQ 514

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWI---HNQKELTGGRYTILETGDLKIT 275
            IT+ P+      G  V  TC+    P  +P + W     + +EL       +E G L I 
Sbjct: 515  ITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDGRDLQELGDSDKYFIEDGRLVIH 574

Query: 276  DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
             + ++D G Y+C A  +L   +    L V                 G   +    AVSD 
Sbjct: 575  SLDYSDQGNYSCVASTELDVVESRAQLLV----------------VGSPGSVPWLAVSDL 618

Query: 336  SL-KLSIVWLRGS---------EPIDFESEPRFVQSND-YSLTVTKSSELDSG------- 377
             L K S V L  S         E  D E E + +     YSL     ++  +        
Sbjct: 619  HLLKQSQVRLSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYV 678

Query: 378  QYTCRAQTELDFIEAQ---ATLTVQVPLEAPSNFTLI---QVIDAKKAVVSWNPVSPQSL 431
             YT R      +   +    + TV  P  AP    +    +  +    V++W P+     
Sbjct: 679  HYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVNVKGEGNETTNMVITWKPLRWMDW 738

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                  Y+VQ W  +   G  +E IV+      +    FVP      +V A N    GP 
Sbjct: 739  NAPQVQYRVQ-WRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYE---IKVQAVNRQGKGPE 794

Query: 492  SEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVKG 546
             ++    + E  P  V  LE I  L SSA  +KW  V   Q  G L GY + Y  +  + 
Sbjct: 795  PQVTIGYSGEDYPQAVPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGYNVTYWREGSQR 854

Query: 547  TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF---K 603
                    R   +    TTS  L+GL P + Y + +  +   G G  S++ F  P     
Sbjct: 855  KHSKRHTHRDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGLGPASEFTFSTPEGVPG 914

Query: 604  NPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSEL 663
            +P+ +     +  +L + W   P + HN     Y + +R  + G         + R  EL
Sbjct: 915  HPEALHVECQSNTSLRLHW--QPPLSHNGVLTGYVLSYRPLDEGGKVPLS--FNLRDPEL 970

Query: 664  VLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
               N     P   Y  ++  T  E  GE  +RE
Sbjct: 971  RAHNLTDLSPHLRYRFQLQATTKEGPGEAIVRE 1003



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 160/389 (41%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS----QGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P D +     Q  +  S  I   + 
Sbjct: 38  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKDELGVTVYQAPHSGSFTITGNNS 97

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P      E E+V   C  
Sbjct: 98  NFAQRFQGVYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPV--EVEEGESVVLPCHP 155

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 156 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 213

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 214 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 273

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++ +V   D GEY C A N LG+A+    +TV+   +   +
Sbjct: 274 PSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSARHDYYVTVEAAPYWLHK 333

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  I W     P++  ++ +  +    +L ++    
Sbjct: 334 PQSHLYGPGETARLDCQVQGRP--QPEITWRINGIPVEELAKDQKYRIQRGALILSNVQP 391

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A      + A A +  VQ+P
Sbjct: 392 SDTMVTQCEAGNRHGLLLANAYIYVVQLP 420


>gi|403306865|ref|XP_003943940.1| PREDICTED: neural cell adhesion molecule L1 isoform 1 [Saimiri
           boliviensis boliviensis]
          Length = 1248

 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 193/718 (26%), Positives = 307/718 (42%), Gaps = 74/718 (10%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L + +V   D G Y 
Sbjct: 253 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLNVGEEDDGEYR 311

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ +   ++V AAPY+  +P+       ET   +C+  G P+PEI W  NG
Sbjct: 312 CLAENSLGSAR-HDYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEITWRING 370

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 371 IPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEAGNRHGLLLANAYIYVVQLPAKILT 430

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 431 ADNQTYMAVRGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 490

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L +K+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 491 DTGRYFCQAANDQNNVTIVANLQIKDATQITQGPRSTIEKKGSRVTFTCQASFDPSLQPS 550

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 551 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 608

Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
                 VP  A S+  L++     +  +SW+P    +       Y ++   ++       
Sbjct: 609 VGSPGSVPWLAVSDLHLLK---QSQVRLSWSPAEDHN--APIEKYDIEFEDKEMAPEKWY 663

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTV----- 507
            L    G  T+T + K  P      RV A N    G PS +  + VTPE  P        
Sbjct: 664 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVNVK 722

Query: 508 -QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
            +  E   +  +   L+W+    P    + Y+++++  +GT+ GP  E++  +SDP    
Sbjct: 723 GEGNETTNMVITWKPLRWMDWNAPQ---VQYRVQWRP-QGTR-GPWQEQI--VSDPFLVV 775

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
           +  +   P   Y I +    + G G E +    + +   D  +              A+P
Sbjct: 776 SNTSTFVP---YEIKVQAVNRQGKGPEPQ--VTIGYSGEDYPQ--------------AVP 816

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVL-DWRQSELVLANQPTFQPYEIKVVQTWTEK 685
           E+E                  E  N   VL  WR  +L    +   + Y +   +  +++
Sbjct: 817 ELE----------------GIEILNSSAVLVKWRPVDLAQV-KGHLRGYNVTYWREGSQR 859

Query: 686 --DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                 + R+ +V    +T+  +    P S     V AFNG   GP SE  +F TPEG
Sbjct: 860 KHSKRHTHRDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGLGPASE-FTFSTPEG 916



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 174/693 (25%), Positives = 265/693 (38%), Gaps = 88/693 (12%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI +G    +LI+ +V+ SD     CE  
Sbjct: 352  LDCQVQGRPQPEITWRINGIPVEELAKDQKYRIQRG----ALILSNVQPSDTMVTQCEAG 407

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + +   A    T    CKA G P P + W+  +G 
Sbjct: 408  NRHGLLLANAY-IYVVQLPAKILTADNQTYMAVRGSTAYLLCKAFGAPVPSVQWLDEDGT 466

Query: 165  PISQAP---PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q     P     +G     I +L+ +DTG Y C A N    V   +  N+ +  A +
Sbjct: 467  TVLQDERFFPYANGTLG-----IRDLQANDTGRYFCQAANDQNNV--TIVANLQIKDATQ 519

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWI---HNQKELTGGRYTILETGDLKIT 275
            IT+ P+      G  V  TC+    P  +P + W     + +EL       +E G L I 
Sbjct: 520  ITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDGRDLQELGDSDKYFIEDGRLVIH 579

Query: 276  DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
             + ++D G Y+C A  +L   +    L V                 G   +    AVSD 
Sbjct: 580  SLDYSDQGNYSCVASTELDVVESRAQLLV----------------VGSPGSVPWLAVSDL 623

Query: 336  SL-KLSIVWLRGS---------EPIDFESEPRFVQSND-YSLTVTKSSELDSG------- 377
             L K S V L  S         E  D E E + +     YSL     ++  +        
Sbjct: 624  HLLKQSQVRLSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYV 683

Query: 378  QYTCRAQTELDFIEAQ---ATLTVQVPLEAPSNFTLI---QVIDAKKAVVSWNPVSPQSL 431
             YT R      +   +    + TV  P  AP    +    +  +    V++W P+     
Sbjct: 684  HYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVNVKGEGNETTNMVITWKPLRWMDW 743

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                  Y+VQ W  +   G  +E IV+      +    FVP      +V A N    GP 
Sbjct: 744  NAPQVQYRVQ-WRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYE---IKVQAVNRQGKGPE 799

Query: 492  SEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVKG 546
             ++    + E  P  V  LE I  L SSA  +KW  V   Q  G L GY + Y  +  + 
Sbjct: 800  PQVTIGYSGEDYPQAVPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGYNVTYWREGSQR 859

Query: 547  TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF---K 603
                    R   +    TTS  L+GL P + Y + +  +   G G  S++ F  P     
Sbjct: 860  KHSKRHTHRDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGLGPASEFTFSTPEGVPG 919

Query: 604  NPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSEL 663
            +P+ +     +  +L + W   P + HN     Y + +R  + G         + R  EL
Sbjct: 920  HPEALHVECQSNTSLRLHW--QPPLSHNGVLTGYVLSYRPLDEGGKVPLS--FNLRDPEL 975

Query: 664  VLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
               N     P   Y  ++  T  E  GE  +RE
Sbjct: 976  RAHNLTDLSPHLRYRFQLQATTKEGPGEAIVRE 1008



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 160/389 (41%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS----QGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P D +     Q  +  S  I   + 
Sbjct: 43  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKDELGVTVYQAPHSGSFTITGNNS 102

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P      E E+V   C  
Sbjct: 103 NFAQRFQGVYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPV--EVEEGESVVLPCHP 160

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 161 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 218

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 219 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 278

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++ +V   D GEY C A N LG+A+    +TV+   +   +
Sbjct: 279 PSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSARHDYYVTVEAAPYWLHK 338

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  I W     P++  ++ +  +    +L ++    
Sbjct: 339 PQSHLYGPGETARLDCQVQGRP--QPEITWRINGIPVEELAKDQKYRIQRGALILSNVQP 396

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A      + A A +  VQ+P
Sbjct: 397 SDTMVTQCEAGNRHGLLLANAYIYVVQLP 425


>gi|403306867|ref|XP_003943941.1| PREDICTED: neural cell adhesion molecule L1 isoform 2 [Saimiri
           boliviensis boliviensis]
          Length = 1252

 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 193/718 (26%), Positives = 307/718 (42%), Gaps = 74/718 (10%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L + +V   D G Y 
Sbjct: 253 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLNVGEEDDGEYR 311

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ +   ++V AAPY+  +P+       ET   +C+  G P+PEI W  NG
Sbjct: 312 CLAENSLGSAR-HDYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEITWRING 370

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 371 IPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEAGNRHGLLLANAYIYVVQLPAKILT 430

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 431 ADNQTYMAVRGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 490

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L +K+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 491 DTGRYFCQAANDQNNVTIVANLQIKDATQITQGPRSTIEKKGSRVTFTCQASFDPSLQPS 550

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 551 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 608

Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
                 VP  A S+  L++     +  +SW+P    +       Y ++   ++       
Sbjct: 609 VGSPGSVPWLAVSDLHLLK---QSQVRLSWSPAEDHN--APIEKYDIEFEDKEMAPEKWY 663

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTV----- 507
            L    G  T+T + K  P      RV A N    G PS +  + VTPE  P        
Sbjct: 664 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVNVK 722

Query: 508 -QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
            +  E   +  +   L+W+    P    + Y+++++  +GT+ GP  E++  +SDP    
Sbjct: 723 GEGNETTNMVITWKPLRWMDWNAPQ---VQYRVQWRP-QGTR-GPWQEQI--VSDPFLVV 775

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
           +  +   P   Y I +    + G G E +    + +   D  +              A+P
Sbjct: 776 SNTSTFVP---YEIKVQAVNRQGKGPEPQVT--IGYSGEDYPQ--------------AVP 816

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVL-DWRQSELVLANQPTFQPYEIKVVQTWTEK 685
           E+E                  E  N   VL  WR  +L    +   + Y +   +  +++
Sbjct: 817 ELE----------------GIEILNSSAVLVKWRPVDLAQV-KGHLRGYNVTYWREGSQR 859

Query: 686 --DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                 + R+ +V    +T+  +    P S     V AFNG   GP SE  +F TPEG
Sbjct: 860 KHSKRHTHRDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGLGPASE-FTFSTPEG 916



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 174/693 (25%), Positives = 265/693 (38%), Gaps = 88/693 (12%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI +G    +LI+ +V+ SD     CE  
Sbjct: 352  LDCQVQGRPQPEITWRINGIPVEELAKDQKYRIQRG----ALILSNVQPSDTMVTQCEAG 407

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + +   A    T    CKA G P P + W+  +G 
Sbjct: 408  NRHGLLLANAY-IYVVQLPAKILTADNQTYMAVRGSTAYLLCKAFGAPVPSVQWLDEDGT 466

Query: 165  PISQAP---PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q     P     +G     I +L+ +DTG Y C A N    V   +  N+ +  A +
Sbjct: 467  TVLQDERFFPYANGTLG-----IRDLQANDTGRYFCQAANDQNNV--TIVANLQIKDATQ 519

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWI---HNQKELTGGRYTILETGDLKIT 275
            IT+ P+      G  V  TC+    P  +P + W     + +EL       +E G L I 
Sbjct: 520  ITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDGRDLQELGDSDKYFIEDGRLVIH 579

Query: 276  DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
             + ++D G Y+C A  +L   +    L V                 G   +    AVSD 
Sbjct: 580  SLDYSDQGNYSCVASTELDVVESRAQLLV----------------VGSPGSVPWLAVSDL 623

Query: 336  SL-KLSIVWLRGS---------EPIDFESEPRFVQSND-YSLTVTKSSELDSG------- 377
             L K S V L  S         E  D E E + +     YSL     ++  +        
Sbjct: 624  HLLKQSQVRLSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYV 683

Query: 378  QYTCRAQTELDFIEAQ---ATLTVQVPLEAPSNFTLI---QVIDAKKAVVSWNPVSPQSL 431
             YT R      +   +    + TV  P  AP    +    +  +    V++W P+     
Sbjct: 684  HYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVNVKGEGNETTNMVITWKPLRWMDW 743

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                  Y+VQ W  +   G  +E IV+      +    FVP      +V A N    GP 
Sbjct: 744  NAPQVQYRVQ-WRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYE---IKVQAVNRQGKGPE 799

Query: 492  SEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVKG 546
             ++    + E  P  V  LE I  L SSA  +KW  V   Q  G L GY + Y  +  + 
Sbjct: 800  PQVTIGYSGEDYPQAVPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGYNVTYWREGSQR 859

Query: 547  TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF---K 603
                    R   +    TTS  L+GL P + Y + +  +   G G  S++ F  P     
Sbjct: 860  KHSKRHTHRDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGLGPASEFTFSTPEGVPG 919

Query: 604  NPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSEL 663
            +P+ +     +  +L + W   P + HN     Y + +R  + G         + R  EL
Sbjct: 920  HPEALHVECQSNTSLRLHW--QPPLSHNGVLTGYVLSYRPLDEGGKVPLS--FNLRDPEL 975

Query: 664  VLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
               N     P   Y  ++  T  E  GE  +RE
Sbjct: 976  RAHNLTDLSPHLRYRFQLQATTKEGPGEAIVRE 1008



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 160/389 (41%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS----QGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P D +     Q  +  S  I   + 
Sbjct: 43  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKDELGVTVYQAPHSGSFTITGNNS 102

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P      E E+V   C  
Sbjct: 103 NFAQRFQGVYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPV--EVEEGESVVLPCHP 160

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 161 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 218

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 219 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 278

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++ +V   D GEY C A N LG+A+    +TV+   +   +
Sbjct: 279 PSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSARHDYYVTVEAAPYWLHK 338

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  I W     P++  ++ +  +    +L ++    
Sbjct: 339 PQSHLYGPGETARLDCQVQGRP--QPEITWRINGIPVEELAKDQKYRIQRGALILSNVQP 396

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A      + A A +  VQ+P
Sbjct: 397 SDTMVTQCEAGNRHGLLLANAYIYVVQLP 425


>gi|345804803|ref|XP_540402.3| PREDICTED: protein sidekick-2 [Canis lupus familiaris]
          Length = 2180

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 181/661 (27%), Positives = 264/661 (39%), Gaps = 85/661 (12%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K+Q V+  +   +   ++  F      P PQ  W +DG  I PS RI+      +L+I  
Sbjct: 177 KRQSVSHGEAAVISAPRIASF------PRPQVTWFRDGRKIPPSSRIAI-TLENTLVILS 229

Query: 94  VEFSDQGSY------------------TCEVSNGVGEAKSYSI-------DLSVLAA--- 125
               D G Y                  T  V N  G A   +        + SV+A    
Sbjct: 230 TVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSE 289

Query: 126 --------------------------PYFTVEPE-FINAAEEETVTFECKASGLPEPEIH 158
                                     P F  EPE  I A  E+ V   C+A G+P P I 
Sbjct: 290 VTMECVANARASTVPTTPREAHMSQPPQFVKEPERHITAEMEKVVDIPCRAKGVPPPSIT 349

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W  +   +     N  R+ G   + I  L   DTG + C A N+ G V    Y+ V + A
Sbjct: 350 WYKDAAVVEVERLNRFRQRGDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAVTSIA 409

Query: 219 PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLK 273
           P IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T+LE+G L 
Sbjct: 410 PNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLL 469

Query: 274 ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVS 333
           I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+  C    
Sbjct: 470 ISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVCGVTH 529

Query: 334 DPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393
           DP + +  VW +    +  ES PR     + SL ++++   D G YTCR  +        
Sbjct: 530 DPRVTVRYVWEKDGTALGMESNPRIRLDKNGSLHISQTWSGDIGTYTCRVLSAGGNDSRS 589

Query: 394 ATLTVQVPLEAPSNFTLIQVIDAKKAV-VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSI 452
           A L V+    AP +         ++A+ ++W    P         Y ++  +E +   ++
Sbjct: 590 AHLRVRQLPHAPEHPVATLSTTERRAINLTW--AKPFDGNSPLLRYLLEM-SENNAPWTV 646

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA 512
               V+  E+T+  V   VPA     R+ A N    G  S+    V+    P T      
Sbjct: 647 LLASVDP-EATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNV 705

Query: 513 IPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
           I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG    +   I+D    +  
Sbjct: 706 IASGRTNQSIMIQWQPPPESHQNGLLKGYIIRY-CLAGLPVG---YQFKNITDADVNNLL 761

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLVISWT 623
           L  L   T Y I +A Y  AG G  S       L  VP   P NV    +    +  +W 
Sbjct: 762 LEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTWN 821

Query: 624 A 624
           A
Sbjct: 822 A 822



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 143/633 (22%), Positives = 236/633 (37%), Gaps = 56/633 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           K V++ C   G P P   W KD   V +   +R  Q   G  L I  +   D G + C  
Sbjct: 332 KVVDIPCRAKGVPPPSITWYKDAAVVEVERLNRFRQRGDG-GLQISGLVPDDTGMFQCFA 390

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPI 166
            N  GE ++ +       AP  T  P      +  +V   C+ SG P P I W    + +
Sbjct: 391 RNAAGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERIL 450

Query: 167 SQAPPN-PR-RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           +      PR   +    + I     SD G Y C ATNS G       + V A    IT+ 
Sbjct: 451 ASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWART-RITKP 509

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDVAF 279
           P+D+  + G    + C V   P+  V ++  +     G     R  + + G L I+    
Sbjct: 510 PQDQSVIKGTQASMVCGVTHDPRVTVRYVWEKDGTALGMESNPRIRLDKNGSLHISQTWS 569

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------EDYEVEAGQSATFRCNAV 332
            D G YTC   +  G    S  L V++  H  + P       E   +    +  F  N+ 
Sbjct: 570 GDIGTYTCRVLSAGGNDSRSAHLRVRQLPHAPEHPVATLSTTERRAINLTWAKPFDGNS- 628

Query: 333 SDPSLKLSIVWLRGSEP-------IDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTC 381
             P L+  +     + P       +D E+    V+    +  Y   +   +++  GQ++ 
Sbjct: 629 --PLLRYLLEMSENNAPWTVLLASVDPEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSK 686

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
             +        + +L  + P   P N       + +  ++ W P       G  +GY ++
Sbjct: 687 DTE--------RVSLPEEPPTAPPQNVIASGRTN-QSIMIQWQPPPESHQNGLLKGYIIR 737

Query: 442 TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
                   G   + I +  +     ++  +  +     V A+N A  G  S  ++  T +
Sbjct: 738 YCLAGLPVGYQFKNITD-ADVNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQ 796

Query: 502 GV----PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK-IKYQSVKGTKVGPLLERL 556
           GV    PG V + EA    +  F      P+  NG+  GYK I ++  +  +V  +  R 
Sbjct: 797 GVPTVPPGNVHA-EATNSTTIRFTWNAPSPQFINGINQGYKLIAWEPEQEEEVTMVTAR- 854

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS--- 613
           P   D +     ++GL+  T+Y   +  +T  GDG  S        ++     G  S   
Sbjct: 855 PNFQD-SIHVGFVSGLKKFTEYFTSVLCFTTPGDGPRSTPQLVRTHEDVPGPVGHLSFSE 913

Query: 614 -TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
               +L +SW      E N     YRI W  +N
Sbjct: 914 ILDTSLKVSWQE--PGEKNGILTGYRISWEEYN 944



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 11/174 (6%)

Query: 422 SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR-- 479
           +WN  SPQ + G  +GYK+  W E + E  +  +        +  V  FV   K F    
Sbjct: 819 TWNAPSPQFINGINQGYKLIAW-EPEQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYF 876

Query: 480 --VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
             VL F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY
Sbjct: 877 TSVLCFTTPGDGPRSTPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGY 936

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           +I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G
Sbjct: 937 RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTAKGQG 985



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V WN +      G   GYKV  + EKD +   R  +V  
Sbjct: 1206 VPSSGPTNVSALATTSSS-MLVRWNEIPEADRNGLVLGYKVM-YKEKDSDSQPRFWLVEG 1263

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1264 NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 1323

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y++ ++    T     +E L     P+       GL+P + Y
Sbjct: 1324 SVRLIWQPPAAPNGIILAYQVTHRLNASTANAATVEVL----APSARQYTATGLKPESVY 1379

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1380 LFRITAQTRKGWGEAAEAL 1398



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 126/307 (41%), Gaps = 43/307 (14%)

Query: 414  IDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDK 469
            + A+  ++SW P    +SP       R Y VQT     G  ++    V+   S    VD+
Sbjct: 1421 VKARSVLLSWEPGSDGLSP------VRYYTVQTRELPGGRWALHSASVSHNASAFV-VDR 1473

Query: 470  FVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPGTVQSLEAI-PLGSSAFYLKWVKP 527
              P +    RV A N   +   SE      T +  P    ++ ++ P  +++  ++W  P
Sbjct: 1474 LKPFTSYKFRVKATNDIGDSEFSEESEPLTTLQAAPDEAPTIVSVTPHTTTSVLIRWQPP 1533

Query: 528  --EQPNGVLMGYKIKYQSV---------------KGTKVGPL--LERLPYISDPTTTSAK 568
              ++ NG+L+G++I+Y+ +                G K   L  +  +  +S P+ T  +
Sbjct: 1534 AEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELTSMYAVRNLSRPSLTQYE 1593

Query: 569  LAGLEPSTKYRIHLAGYTKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWT 623
            L  L    +Y I ++ Y   G+G  S  + +F    VP   P NV   G+T   L ++W 
Sbjct: 1594 LDNLNKHRRYEIRMSVYNAVGEGPSSPPQEVFVGEAVPTAAPRNVAVHGATATQLDVTWE 1653

Query: 624  AMPEIEHNAPHFKYRI-FW--RRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQ 680
              P    N     Y+I FW  +R N  E   +   L   ++ + L N   +  Y + V  
Sbjct: 1654 PPPLENQNGDIQGYKIYFWEAQRRNVTE---RVKTLFLAENSVKLKNLTGYTAYMVSVAA 1710

Query: 681  TWTEKDG 687
                 DG
Sbjct: 1711 FNAAGDG 1717



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/308 (22%), Positives = 128/308 (41%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 966  LTALTTYTIEVAAMTAKGQGQV----SASTISSGVPPELPGAPTNLGISN---------- 1011

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +   G + E    L+V    N+ ++ + EV +  P
Sbjct: 1012 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLVHQLTNEPDARSMEVPELNP 1071

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 1072 FTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTA---SETSLWLRWMPL 1128

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY    G   G  L  +  + D       +  LE  T+YR+ + 
Sbjct: 1129 PEMEYNGNPESVGYKIKYSRADGH--GKTLSHV--VQDRVEREYTIEDLEEWTEYRVQVQ 1184

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S+ +       VP   P NV    +T +++++ W  +PE + N     Y+
Sbjct: 1185 AFNAIGSGPWSQTVMGRTRESVPSSGPTNVSALATTSSSMLVRWNEIPEADRNGLVLGYK 1244

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1245 VMYKEKDS 1252



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/332 (19%), Positives = 110/332 (33%), Gaps = 66/332 (19%)

Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           APYF  EP       E   +   C A G    E  W+HN + +++            R  
Sbjct: 82  APYFKTEPVRTQVHLEGNRLVLTCMAEGSWPLEFKWLHNNRELTKFSLE-------YRYM 134

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RV 242
           I +L ++  G Y C   N +G + +      +A+     E  K +    G+  V++  R+
Sbjct: 135 ITSLDRTHAGFYRCIVRNRMGALLQRQTEVQVAYMGSFEEGEKRQSVSHGEAAVISAPRI 194

Query: 243 FGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARNK--------- 292
              P+P+V W  + +++    R  I     L I      D+G Y   A N          
Sbjct: 195 ASFPRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQ 254

Query: 293 ----------------------------------------LGTAQGSGSLTVKEHTHITD 312
                                                   +  A+ S   T     H++ 
Sbjct: 255 PITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARASTVPTTPREAHMS- 313

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKL------SIVWLRGSEPIDFESEPRFVQSNDYSL 366
           QP  +  E  +  T     V D   +       SI W + +  ++ E   RF Q  D  L
Sbjct: 314 QPPQFVKEPERHITAEMEKVVDIPCRAKGVPPPSITWYKDAAVVEVERLNRFRQRGDGGL 373

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
            ++     D+G + C A+     ++    L V
Sbjct: 374 QISGLVPDDTGMFQCFARNAAGEVQTSTYLAV 405



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N   +    A +  V+W P   ++  G  +GYK+  W  +    + R   +  
Sbjct: 1630 VPTAAPRNVA-VHGATATQLDVTWEPPPLENQNGDIQGYKIYFWEAQRRNVTERVKTLFL 1688

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E++  ++      +     V AFN A +GP S      T +  P    S+    L +++
Sbjct: 1689 AENSV-KLKNLTGYTAYMVSVAAFNAAGDGPRSTPTRGQTQQAAPSAPSSVRFSELTTTS 1747

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNGVL GY++ Y+
Sbjct: 1748 VNVSWEAPQFPNGVLEGYRLVYE 1770


>gi|350581377|ref|XP_003354485.2| PREDICTED: protein sidekick-1 [Sus scrofa]
          Length = 2071

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 129/396 (32%), Positives = 183/396 (46%), Gaps = 17/396 (4%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           R + V   + +  L CI    PL +    W ++GVP+         ++G+ L I     S
Sbjct: 93  RNRSVVAGSSEATLECIASARPLEELRVTWKRNGVPVTSGLH----SFGRRLTISTPTSS 148

Query: 98  DQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAE-EETVTFECKASGLPE 154
           D G Y CE +      E       LS++  PYFT EPE     E EETV   C A G+P 
Sbjct: 149 DTGPYVCEAALPGSPFEPARAQAFLSIIEPPYFTAEPESRILVEVEETVDLACGAMGVPP 208

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGP-NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P + W  +   + +   NPR +  P   + I+ LR  D+G + C A+N  G      Y++
Sbjct: 209 PALQWYKDAVSVHKLR-NPRYQALPAGGLRIQKLRPEDSGIFQCFASNEGGEAQTSTYLD 267

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V   AP  T+ P D    DG T VL C+V GAP+P + W    + L  G     R+ +LE
Sbjct: 268 VTNVAPAFTQPPADTTVTDGMTAVLRCQVSGAPRPAITWRRGNQILASGSVRIPRFMLLE 327

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L+IT V   D+G YTC A N  G+ + S +LTV   T I   PED  V  G +A   
Sbjct: 328 SGGLQITPVFIQDAGNYTCHAANAEGSLRASATLTVWNRTSIVRPPEDSVVIKGTTAALH 387

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A  DP + L  VW + +  I      R V   D SL ++++   D G YTC   +E  
Sbjct: 388 CGATHDPRVSLRYVWKKDNAVIAPPGSSRIVVEKDGSLLISQTWSGDIGDYTCDVVSEGG 447

Query: 389 FIEAQATLTVQVPLEAPSNFTL-IQVIDAKKAVVSW 423
                A L V     +P N    +    ++  ++SW
Sbjct: 448 NDSRAARLEVIELPHSPQNLLASLNSSHSRTVMLSW 483



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 3/134 (2%)

Query: 411  IQV--IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
            IQV  + A +  V+W+P  P+S  G+ +GYK+  W E DG+    ++ V     TT ++ 
Sbjct: 1571 IQVNPLTASQLEVTWDPPPPESQNGNIQGYKIYYW-EADGQNETEKMKVLFLPETTVKLK 1629

Query: 469  KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPE 528
                 +     V AFN A +GP S      T +  PGT   L    + S+   + W +P 
Sbjct: 1630 NLSSHTSYLVSVSAFNAAGDGPRSGPRQGRTHQAAPGTPSFLAFSEITSTTLNVSWGEPA 1689

Query: 529  QPNGVLMGYKIKYQ 542
              NG+L GY++ Y+
Sbjct: 1690 AANGILQGYRVVYE 1703



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 97/241 (40%), Gaps = 22/241 (9%)

Query: 387 LDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
           + F +   +L V VP   P N    + +++      W+P   Q + G  +GYK+  W   
Sbjct: 718 VGFQDTHPSLVVAVPTAPPQNVQ-TEAVNSTTIRFLWSPPPQQFVNGINQGYKLLAWPAD 776

Query: 447 DGEG----SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 502
             E     +I            T + KF   +   A VL F    +GPPS      T E 
Sbjct: 777 APEAVTVVTIAPDFHGVHHGFITNLKKF---TAYLASVLCFTTPGDGPPSAPQLVWTHED 833

Query: 503 VPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
            PG V  L    +  ++  + W +P + NG++ GY++ ++       G    RL    + 
Sbjct: 834 RPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYEVSWEV-----FGRNDSRLTLTLNS 888

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY--VPFKNPDNVEGRGSTPNNLVI 620
           TT   K+ GL   T Y I +A  T  G G  +       VP + P         P+NLVI
Sbjct: 889 TTHEFKIKGLSSLTTYTIDVAAVTAVGVGLATSSTISSGVPPELP-------GAPSNLVI 941

Query: 621 S 621
           S
Sbjct: 942 S 942



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 93/234 (39%), Gaps = 33/234 (14%)

Query: 388  DF-IEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE 445
            DF +E +   T+Q VP E PS F  +        +V W P   +SL G  +GY++  + E
Sbjct: 1426 DFSVETEPVTTLQDVPGEPPS-FVSVTPHTTSSVLVQWQPPRDESLNGLLQGYRIY-YRE 1483

Query: 446  KDGEG-------------SIRELIVNKGES---------TTTEVDKFVPASKNFARVLAF 483
             + EG             ++R  +  +            TT E+       +    + A+
Sbjct: 1484 LEYEGASATESKTLKTPSALRAELTAQSSFKSVNSSSALTTYELTHLKKYRRYEVLMTAY 1543

Query: 484  NGAYNGPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIK 540
            N     P S  +     E  P    Q ++  PL +S   + W    PE  NG + GYKI 
Sbjct: 1544 NVVGESPASAPVEVFVGEAAPAVAPQRIQVNPLTASQLEVTWDPPPPESQNGNIQGYKIY 1603

Query: 541  YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y    G       E++  +  P TT  KL  L   T Y + ++ +  AGDG  S
Sbjct: 1604 YWEADGQNE---TEKMKVLFLPETT-VKLKNLSSHTSYLVSVSAFNAAGDGPRS 1653



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 12/204 (5%)

Query: 397  TVQVPLE-APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIR 453
            T+Q P + AP++ T ++        + W P+      G+    GY+++ W       ++ 
Sbjct: 1031 TLQAPPDVAPTSIT-VRTASETSLRLRWVPLPDSRYNGNPEAVGYRIKYWRPGLQASALA 1089

Query: 454  ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEA 512
             +I ++ E   T V+     ++   ++ AFN    GP SE +   T E VP    +++ A
Sbjct: 1090 HVISDRLEREFT-VEGLEEWTEYELQMQAFNAIGAGPWSEAVRGRTRESVPSAAPENVSA 1148

Query: 513  IPLGSSAFYLKWVK-PEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
              + S+   L W   PEQ  NG+++GYKI +++ K     P   R   +    T SA LA
Sbjct: 1149 EAVSSTQILLTWASVPEQDQNGLILGYKILFRA-KDLDPEP---RSHVVRGNGTQSALLA 1204

Query: 571  GLEPSTKYRIHLAGYTKAGDGAES 594
            GL     Y + +  +T+ G+G  S
Sbjct: 1205 GLGKFVLYELRVLAFTRIGNGVPS 1228



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 11/148 (7%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V  Q   G   GYK+  +  KD +   R  +V +
Sbjct: 1138 VPSAAPENVS-AEAVSSTQILLTWASVPEQDQNGLILGYKI-LFRAKDLDPEPRSHVV-R 1194

Query: 460  GESTTTEV----DKFVPASKNFARVLAFNGAYNG-PPSEIISFVTPEGVPGTVQSLEAIP 514
            G  T + +     KFV       RVLAF    NG P S  I   T +  PG    L    
Sbjct: 1195 GNGTQSALLAGLGKFVLYE---LRVLAFTRIGNGVPSSPPILERTRDDAPGPPVRLVFPE 1251

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
            +  ++  + W  PE+PNG+++GY+I Y+
Sbjct: 1252 VRLTSVRIVWQPPEEPNGIILGYQIAYR 1279



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 123/312 (39%), Gaps = 34/312 (10%)

Query: 390  IEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
            +   +T++  VP E   APSN  +I  I  + A + + P       G+     +  W  +
Sbjct: 918  LATSSTISSGVPPELPGAPSNL-VISNISPRSATLQFRP-------GYDGKTSISRWIVE 969

Query: 447  DGEGSI---RELIV-----NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
               G+I    E +      N+ ++ T E+    P ++   R+   N     P S+    +
Sbjct: 970  GQVGAIGDEEEWVSLYEEENEPDTQTLEIPNLTPYTQYRFRMRQVNVVGASPFSQSSRVI 1029

Query: 499  TPEGVPGTVQ--SLEAIPLGSSAFYLKWVK-PEQP---NGVLMGYKIKYQSVKGTKVGPL 552
                 P  V   S+       ++  L+WV  P+     N   +GY+IKY    G +   L
Sbjct: 1030 QTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSRYNGNPEAVGYRIKYWR-PGLQASAL 1088

Query: 553  LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF-----YVPFKNPDN 607
                  ISD       + GLE  T+Y + +  +   G G  S+ +       VP   P+N
Sbjct: 1089 AH---VISDRLEREFTVEGLEEWTEYELQMQAFNAIGAGPWSEAVRGRTRESVPSAAPEN 1145

Query: 608  VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667
            V     +   ++++W ++PE + N     Y+I +R  +         V        +LA 
Sbjct: 1146 VSAEAVSSTQILLTWASVPEQDQNGLILGYKILFRAKDLDPEPRSHVVRGNGTQSALLAG 1205

Query: 668  QPTFQPYEIKVV 679
               F  YE++V+
Sbjct: 1206 LGKFVLYELRVL 1217


>gi|119593195|gb|EAW72789.1| L1 cell adhesion molecule, isoform CRA_c [Homo sapiens]
          Length = 1255

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 196/721 (27%), Positives = 306/721 (42%), Gaps = 80/721 (11%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L +  V   D G Y 
Sbjct: 253 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLKVGEEDDGEYR 311

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 312 CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 370

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 371 IPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 430

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 431 ADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 490

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 491 DTGRYFCLAANDQNNVTIMANLKVKDATQITQGPRSTIEKKGSRVTFTCQASFDPSLQPS 550

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 551 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 608

Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
                 VP    S+   + ++   +  VSW+P    +       Y ++   ++       
Sbjct: 609 VGSPGPVPRLVLSD---LHLLTQSQVRVSWSPAEDHN--APIEKYDIEFEDKEMAPEKWY 663

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTV----- 507
            L    G  T+T + K  P      RV A N    G PS +  + VTPE  P        
Sbjct: 664 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVK 722

Query: 508 -QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
            +  E   +  +   L+W+    P    + Y+++++  +GT+ GP  E++  +SDP    
Sbjct: 723 GEGNETTNMVITWKPLRWMDWNAPQ---VQYRVQWRP-QGTR-GPWQEQI--VSDPFLVV 775

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
           +  +   P   Y I +      G G E +    + +   D  +              A+P
Sbjct: 776 SNTSTFVP---YEIKVQAVNSQGKGPEPQ--VTIGYSGEDYPQ--------------AIP 816

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVL-DWRQSELVLANQPTFQPYEIKVVQTWTE- 684
           E+E                  E  N   VL  WR  +L    +   + Y    V  W E 
Sbjct: 817 ELEGI----------------EILNSSAVLVKWRPVDLAQV-KGHLRGYN---VTYWREG 856

Query: 685 ---KDGEGSI-RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 740
              K  +  I ++ +V    +T+  +    P S     V AFNG  +GP SE  +F TPE
Sbjct: 857 SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGSGPASE-FTFSTPE 915

Query: 741 G 741
           G
Sbjct: 916 G 916



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 166/694 (23%), Positives = 264/694 (38%), Gaps = 90/694 (12%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI +G    +LI+ +V+ SD     CE  
Sbjct: 352  LDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRG----ALILSNVQPSDTMVTQCEAR 407

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + +   A +  T    CKA G P P + W+  +G 
Sbjct: 408  NRHGLLLANAY-IYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGT 466

Query: 165  PISQAPPNPRRKVGP---NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q       +  P     + I +L+ +DTG Y C A N    V   +  N+ +  A +
Sbjct: 467  TVLQ-----DERFFPYANGTLGIRDLQANDTGRYFCLAANDQNNV--TIMANLKVKDATQ 519

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWIHNQKELTGGRYTILETGDLKITDVA 278
            IT+ P+      G  V  TC+    P  +P + W  + ++L        E GD   +D  
Sbjct: 520  ITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDGRDLQ-------ELGD---SDKY 569

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL- 337
            F + G     + +   + QG+ S        + +      V        R   +SD  L 
Sbjct: 570  FIEDGRLVIHSLDY--SDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRL-VLSDLHLL 626

Query: 338  ---KLSIVWLRGSE---PI---DFESEPRFVQSND-YSLTVTKSSELDSG-------QYT 380
               ++ + W    +   PI   D E E + +     YSL     ++  +         YT
Sbjct: 627  TQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYVHYT 686

Query: 381  CRAQTELDFIEAQ---ATLTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSPQS 430
             R      +   +    + TV  P  AP        +D K         V++W P+    
Sbjct: 687  FRVTAINKYGPGEPSPVSETVVTPEAAPEK----NPVDVKGEGNETTNMVITWKPLRWMD 742

Query: 431  LRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGP 490
                   Y+VQ W  +   G  +E IV+      +    FVP      +V A N    GP
Sbjct: 743  WNAPQVQYRVQ-WRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYE---IKVQAVNSQGKGP 798

Query: 491  PSEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVK 545
              ++    + E  P  +  LE I  L SSA  +KW  V   Q  G L GY + Y  +  +
Sbjct: 799  EPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGYNVTYWREGSQ 858

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
                   + +   +    TTS  L+GL P + Y + +  +   G G  S++ F  P   P
Sbjct: 859  RKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGSGPASEFTFSTPEGVP 918

Query: 606  DNVEG---RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
             + E       +  +L++ W   P + HN     Y + +  H   E        + R  E
Sbjct: 919  GHPEALHLECQSNTSLLLRW--QPPLSHNGVLTGYVLSY--HPLDEGGKGQLSFNLRDPE 974

Query: 663  LVLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
            L   N     P   Y  ++  T  E  GE  +RE
Sbjct: 975  LRTHNLTDLSPHLRYRFQLQATTKEGPGEAIVRE 1008



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 161/389 (41%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS----QGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P + +     Q  +  S  I   + 
Sbjct: 43  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSFTITGNNS 102

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P      E E+V   C  
Sbjct: 103 NFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPV--EVEEGESVVLPCNP 160

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 161 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 218

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 219 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 278

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++  V   D GEY C A N LG+A+ +  +TV+   +   +
Sbjct: 279 PSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHK 338

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++  ++ +  +    +L ++    
Sbjct: 339 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQP 396

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A+     + A A +  VQ+P
Sbjct: 397 SDTMVTQCEARNRHGLLLANAYIYVVQLP 425



 Score = 47.4 bits (111), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 127/323 (39%), Gaps = 61/323 (18%)

Query: 119 DLSVLAAPYFTVE--PEFINAAEEETVTFECKASGLPEPEIHWVHNG---KP-------I 166
           DLS +  P    E  P  +     + ++ +C+ASG PE +  W  +G   KP       +
Sbjct: 27  DLSSVMEPPVITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTV 86

Query: 167 SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEAP 225
            Q+P +    +  N     N  +   G Y C A+N LG         +   AP+   E  
Sbjct: 87  YQSPHSGSFTITGNN---SNFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETV 143

Query: 226 KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL---TGGRYTILETGDLKITDVAFADS 282
           K     +G++VVL C    + +P   +  N K L      R T+ + G+L   +V  +D+
Sbjct: 144 KPVEVEEGESVVLPCNPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDN 203

Query: 283 -GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA-------------------- 321
             +Y C        A   G+ T+     I  +P D  V+A                    
Sbjct: 204 HSDYICH-------AHFPGTRTI-----IQKEPIDLRVKATNSMIDRKPRLLFPTNSSSH 251

Query: 322 -----GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
                GQ     C A   P+   +I WLR S P+   ++    Q+++ +L + K  E D 
Sbjct: 252 LVALQGQPLVLECIAEGFPT--PTIKWLRPSGPM--PADRVTYQNHNKTLQLLKVGEEDD 307

Query: 377 GQYTCRAQTELDFIEAQATLTVQ 399
           G+Y C A+  L        +TV+
Sbjct: 308 GEYRCLAENSLGSARHAYYVTVE 330


>gi|317418926|emb|CBN80964.1| Neural cell adhesion molecule L1-like protein [Dicentrarchus
           labrax]
          Length = 1247

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 195/727 (26%), Positives = 305/727 (41%), Gaps = 85/727 (11%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFS 97
           R +   ++ + ++L CI  G P PQ  W K G  +PI    +    N+GK LI+  VE  
Sbjct: 252 RSETQLVKEEDLKLECIAEGFPTPQVEWVKVGHRLPI----KAKLENHGKLLIVPRVEQE 307

Query: 98  DQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI 157
           D G Y C+  N +GEA  Y   +++   P +  EPE   +     V  +C ASG P+P I
Sbjct: 308 DSGKYMCKAKNALGEAVHY-FTVTIEEPPEWVSEPESQLSMIGSDVLIKCSASGTPQPTI 366

Query: 158 HWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAH 217
            W  NG P+ +AP   R+ +G + I + N + SD+  Y C A+N    +  +  + ++  
Sbjct: 367 TWRVNGVPLQEAPAANRKVLG-DTILLRNAKASDSAVYQCEASNRHRTLLSNANIMIMNL 425

Query: 218 APEITEAPKDEYT-VDGKTVVLTCRVFGAPKPEVNWIHNQ--KELTGGRYTILETGDLKI 274
            P I     ++Y+ V+GK V++ C+VF +P   V W  +   + + G R+ + + G L+I
Sbjct: 426 PPMILTKEGEDYSAVEGKGVMMHCKVFSSPPSTVTWSKDDSSESVEGPRFAVHDNGSLEI 485

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             V   D+G+YTC A+N  G++     L VK+ T I   PE  ++  G +A   C A  D
Sbjct: 486 YSVEKGDTGQYTCLAKNTEGSSAIDTMLYVKDPTRIVVPPEHLQILIGTTAQLSCLAEYD 545

Query: 335 PSLK--LSIVWLRGSEPIDF---ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            S K  + ++W +    I     E+   FV+  D  L +   S  D G YTC A+T +D 
Sbjct: 546 ESFKNDIELLWEKDDMEIALNYTENSRYFVE--DGILQIINVSHWDQGVYTCVARTPVDQ 603

Query: 390 IEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQ--SLRGHFRGYKVQTWTEKD 447
             A A L V    +AP    L +   +K   + WNP      S       Y+   W    
Sbjct: 604 DTASAWLIVLDVPDAPEYLVLSER-KSKSVKLKWNPGDNHNSSTTEFIIEYEESQWEP-- 660

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPGT 506
             G+ +EL+   G   +  +         F RV   N    GP SE    +  P   P  
Sbjct: 661 --GNWKELLRVPGNHNSAVLKLHGNVDYCF-RVSGVNSVGRGPSSEPTERYKPPAAAPD- 716

Query: 507 VQSLEAIPLGSSAFY---LKW--VKPEQPNGVLMGYKIKY--QSVKGTKVGPLLERLPYI 559
            ++ E I +     +   + W  + P + NG  + YK+ Y  Q ++      +++R  ++
Sbjct: 717 -KNPENIKIEGHLAHEMDINWEPLLPIEHNGPGLEYKVSYRRQDLEEDWQEHMVKRHSFV 775

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF-----YVPFKNPDNVEGRGST 614
              T T            Y I +      G G + K +        P   PD+V      
Sbjct: 776 VKNTPTFVP---------YEIKIQAKNNQGWGPDPKIVTGYSGEDFPSAAPDDVAVEVMN 826

Query: 615 PNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPY 674
            + + +SWT + + + +     YRI W                WR   LV          
Sbjct: 827 SSVVKVSWTRVHKDKLHGHLGGYRINW----------------WRLRSLV---------- 860

Query: 675 EIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 734
                     K   G    L +  G+     V    P S+    V+ FNG  NGP S  +
Sbjct: 861 --------DSKKSHGDKHTLTI-PGDRNHAAVPGLTPFSEYSLIVMTFNGRGNGPGSHPV 911

Query: 735 SFVTPEG 741
           +F TPEG
Sbjct: 912 NFKTPEG 918



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 94/198 (47%), Gaps = 11/198 (5%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW------TEKDGEGSIRE 454
            P  AP +   ++V+++    VSW  V    L GH  GY++  W        K   G    
Sbjct: 813  PSAAPDDVA-VEVMNSSVVKVSWTRVHKDKLHGHLGGYRINWWRLRSLVDSKKSHGDKHT 871

Query: 455  LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
            L +  G+     V    P S+    V+ FNG  NGP S  ++F TPEGVP          
Sbjct: 872  LTI-PGDRNHAAVPGLTPFSEYSLIVMTFNGRGNGPGSHPVNFKTPEGVPEKNPVFRVTD 930

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLE 573
            +      L W  P +PNG+L GY ++YQ +  T +VGPL  +   IS+P TT   L  LE
Sbjct: 931  VQKHTVSLVWAPPLEPNGILTGYLLEYQLINDTEEVGPL--QTVDISNPDTTKWTLRDLE 988

Query: 574  PSTKYRIHLAGYTKAGDG 591
            P +KY+++L   T  G G
Sbjct: 989  PVSKYKLYLRSCTTVGCG 1006



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 94/377 (24%), Positives = 152/377 (40%), Gaps = 45/377 (11%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINP---SDRISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           + C   G P P+  W K+G   +P      + + N G  +I  +   ++ QG+Y C  SN
Sbjct: 62  MTCEAKGNPEPEFRWMKNGQEFDPFLDPRLMKEENSGTFVIPNNGNLTEYQGTYRCYASN 121

Query: 109 GVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECK-ASGLPEPEIHWVHNGK 164
            +G A S  I+  V   P F   T++P  +   E +  T +C    G+P  +I+W+    
Sbjct: 122 KLGTAISKEIEFIVPHVPKFPKETLDPVVVE--EGQPFTLKCDPPKGIPPLQIYWMTIS- 178

Query: 165 PISQAPPNPRRKVGPNRITI--ENLRKSDTGNYGCNAT----------NSLGYVYKDVYV 212
            +     + R  +G N        + K    +Y C A           N++  + +    
Sbjct: 179 -LQHIEQDERVSMGLNGDLYFSHAVEKDSRRDYCCFAAFPRIRTIVQKNAMSVIVQTTNA 237

Query: 213 NVLAHAPEITEAPKDEYT----VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI-- 266
            +L   P +   P  E +    V  + + L C   G P P+V W+       G R  I  
Sbjct: 238 -ILQRRPSLL-TPSSERSETQLVKEEDLKLECIAEGFPTPQVEWVK-----VGHRLPIKA 290

Query: 267 -LET-GDLKIT-DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQ 323
            LE  G L I   V   DSG+Y C A+N LG A    ++T++E      +PE      G 
Sbjct: 291 KLENHGKLLIVPRVEQEDSGKYMCKAKNALGEAVHYFTVTIEEPPEWVSEPESQLSMIGS 350

Query: 324 SATFRCNAVSDPSLKLSIVWLRGSEPI-DFESEPRFVQSNDYSLTVTKSSELDSGQYTCR 382
               +C+A   P  + +I W     P+ +  +  R V  +   L   K+S  DS  Y C 
Sbjct: 351 DVLIKCSASGTP--QPTITWRVNGVPLQEAPAANRKVLGDTILLRNAKAS--DSAVYQCE 406

Query: 383 AQTELDFIEAQATLTVQ 399
           A      + + A + + 
Sbjct: 407 ASNRHRTLLSNANIMIM 423



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/287 (22%), Positives = 117/287 (40%), Gaps = 30/287 (10%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGK-------PISQAPPNPRRKVGPNRITIENLRKSDT 192
           +E+    C+A G PEPE  W+ NG+       P      N    V PN   +   +    
Sbjct: 57  DESFPMTCEAKGNPEPEFRWMKNGQEFDPFLDPRLMKEENSGTFVIPNNGNLTEYQ---- 112

Query: 193 GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEV 250
           G Y C A+N LG         ++ H P+  +   D   V +G+   L C    G P  ++
Sbjct: 113 GTYRCYASNKLGTAISKEIEFIVPHVPKFPKETLDPVVVEEGQPFTLKCDPPKGIPPLQI 172

Query: 251 NW--IHNQKELTGGRYTILETGDLKITDVAFADS-GEYTCFA----------RNKLGT-A 296
            W  I  Q      R ++   GDL  +     DS  +Y CFA          +N +    
Sbjct: 173 YWMTISLQHIEQDERVSMGLNGDLYFSHAVEKDSRRDYCCFAAFPRIRTIVQKNAMSVIV 232

Query: 297 QGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           Q + ++  +  + +T   E  E +  +    +   +++      + W++    +  +++ 
Sbjct: 233 QTTNAILQRRPSLLTPSSERSETQLVKEEDLKLECIAEGFPTPQVEWVKVGHRLPIKAK- 291

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE 403
             ++++   L V +  + DSG+Y C+A+  L       T+T++ P E
Sbjct: 292 --LENHGKLLIVPRVEQEDSGKYMCKAKNALGEAVHYFTVTIEEPPE 336


>gi|410900131|ref|XP_003963550.1| PREDICTED: neurofascin-like [Takifugu rubripes]
          Length = 1147

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 178/713 (24%), Positives = 284/713 (39%), Gaps = 67/713 (9%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           + L  +++ + CI  G P P+  W KDG  +     +   N+ K + I    F D G Y 
Sbjct: 244 LVLLGEELLIECIAAGVPTPRITWRKDGEDLVVRSPMKVKNFNKMIQIPKASFEDAGEYV 303

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G  + ++I + V AAP++   P  +  A EE     C++ G P P I W  NG
Sbjct: 304 CTAENKLGYIE-HTITVQVKAAPFWLERPGDLVLAPEEDGRMVCRSDGAPRPTITWFING 362

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           +P   +   P  +V    + + ++   +   Y CNA+N  GY+  + +VNVL   P I  
Sbjct: 363 EPTDSSTLQPNVEVSGETLVLRSVTTLNNAVYQCNASNQYGYLLANAFVNVLHATPRIL- 421

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNWI-HNQKELTGGRYTILETGDLKITDVAFA 280
             ++EY   ++G    L CR FG+P PE+ W  + Q  L G R+     G L+I  +   
Sbjct: 422 GSRNEYLKIIEGSRAFLDCRFFGSPVPELRWSKYGQGNLEGNRFKTHSNGTLEIKSIEVV 481

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D G Y C   N  G  +    + VKE T I  +P D +V  G    F C   +D +  ++
Sbjct: 482 DQGTYLCVVSNVAGRDENQVHIEVKEPTVIVTRPTDIKVIRGTDVRFECAVKTDATTPVT 541

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
             WL+G++P+         +SN   L +  ++  DSG YTC  QTEL+   A A L V  
Sbjct: 542 TTWLKGTKPVTLGWRISMDESN---LVIGNTNPADSGNYTCLVQTELEHKSASAHLMVMD 598

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
             + P++  L +  + +   +SW P    S       Y VQ   +    G  + L +  G
Sbjct: 599 RPDPPTDLELSEPHE-RSVRLSWVP--GNSNHNPITDYLVQYDDDDWLPGKWKNLSLYPG 655

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV--QSLEAIPLGSS 518
           +  +  +   +P +    RV+A N      PS   +     G P  V  ++L+ +    +
Sbjct: 656 DLNSVTL-HLLPFTYYEFRVIAINEIGMSRPSRRSTRFQSSGAPPDVIPKNLKGVGTWRN 714

Query: 519 AFYLKW--VKPEQPNGVLMGYKIKYQ---SVKGTKVGPLLERLPYISDPTTTSAKLAGLE 573
              + W  +   + NG  + Y + ++   S +  K         YI D  T         
Sbjct: 715 NMEISWEPLAYREWNGPHLKYLVWWRRRDSREEWKNATTKWSKYYIYDADTF-------- 766

Query: 574 PSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNLVISWTAMPEI 628
             T Y + +      G G ES  +        P   P N+       N + + W  +   
Sbjct: 767 --TPYELKIQAVNDFGLGPESPVVTGFSGEDRPLTAPLNLRVSDIESNQVTVHWDPVSRN 824

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
                  +Y+I++        W     L W      + +Q                    
Sbjct: 825 SMMGELKEYKIYY--------WRDSSQLRWLWVNRAMKSQ-------------------- 856

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                   N GE +   V    P S     ++  N  + GPPS  I F TPEG
Sbjct: 857 ----AFSTNNGEPSGV-VTGLYPYSNYKMYIVVANNRFEGPPSNNIHFSTPEG 904



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 96/202 (47%), Gaps = 19/202 (9%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVN-- 458
           PL AP N   +  I++ +  V W+PVS  S+ G  + YK+  W +      +R L VN  
Sbjct: 797 PLTAPLNLR-VSDIESNQVTVHWDPVSRNSMMGELKEYKIYYWRDS---SQLRWLWVNRA 852

Query: 459 -KGESTTTE-------VDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSL 510
            K ++ +T        V    P S     ++  N  + GPPS  I F TPEGVP   +S 
Sbjct: 853 MKSQAFSTNNGEPSGVVTGLYPYSNYKMYIVVANNRFEGPPSNNIHFSTPEGVPSVPRSF 912

Query: 511 EAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPL-LERLPYISDPTTTSAKL 569
                   + Y+ W  P +PNG++ GY +KYQ+V  ++   L +E  P    P  TS  +
Sbjct: 913 RIQQRHLDSIYVDWDLPAEPNGIITGYSLKYQTVNASRGEELRVEEFP----PNVTSFSI 968

Query: 570 AGLEPSTKYRIHLAGYTKAGDG 591
              +  T+YR  +A  T+ G G
Sbjct: 969 RRFDRYTRYRFSVAARTEIGIG 990



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 131/309 (42%), Gaps = 31/309 (10%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGK--PISQAP-PNPRRKVGPNRITIENLRKSDTGNYG 196
           ++T+  EC+A G P P   W  NG+   +++ P  + RR  G   I   N  +     Y 
Sbjct: 45  KDTMVIECEAKGNPHPIFSWRRNGRYYNVARDPQASMRRHSGTLDIYAWNNPEQYEAEYQ 104

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTC-RVFGAPKPEVNWIH 254
           C A+N  G  Y +     L  AP       +   +  G  +VL+C    G PKPE  W+ 
Sbjct: 105 CVASNMYGSAYSNKIRLRLYRAPVWPREIIEPVVISAGLPLVLSCDPPPGPPKPETYWMS 164

Query: 255 NQK--ELTGGRYTILETGDLKITDVAFADS-GEYTCFARNKL-GTAQGSGSLTVKEHT-- 308
           + K       R ++   GDL  ++V F DS  +Y C AR       Q    + VK  T  
Sbjct: 165 SCKWPVRQDRRVSMGVNGDLYFSNVLFNDSAADYCCNARLPYRNVIQQKMPVVVKVLTTR 224

Query: 309 HITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF 358
            + +    +    G S+T            C A   P+ +  I W +  E +   S P  
Sbjct: 225 SVVESTPSWLSPKGSSSTILVLLGEELLIECIAAGVPTPR--ITWRKDGEDLVVRS-PMK 281

Query: 359 VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP-----LEAPSNFTLIQV 413
           V++ +  + + K+S  D+G+Y C A+ +L +IE   T+TVQV      LE P +  L   
Sbjct: 282 VKNFNKMIQIPKASFEDAGEYVCTAENKLGYIE--HTITVQVKAAPFWLERPGDLVLAPE 339

Query: 414 IDAKKAVVS 422
            D +    S
Sbjct: 340 EDGRMVCRS 348


>gi|4557707|ref|NP_000416.1| neural cell adhesion molecule L1 isoform 1 precursor [Homo sapiens]
 gi|1705571|sp|P32004.2|L1CAM_HUMAN RecName: Full=Neural cell adhesion molecule L1; Short=N-CAM-L1;
           Short=NCAM-L1; AltName: CD_antigen=CD171; Flags:
           Precursor
 gi|472989|emb|CAA82564.1| neural cell adhesion molecule L1 [Homo sapiens]
 gi|3068548|gb|AAC14352.1| L1 cell adhesion molecule [Homo sapiens]
 gi|116496991|gb|AAI26230.1| L1 cell adhesion molecule [Homo sapiens]
 gi|119593194|gb|EAW72788.1| L1 cell adhesion molecule, isoform CRA_b [Homo sapiens]
 gi|168270912|dbj|BAG10249.1| neural cell adhesion molecule L1 precursor [synthetic construct]
 gi|187951475|gb|AAI36448.1| L1 cell adhesion molecule [Homo sapiens]
          Length = 1257

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 197/721 (27%), Positives = 305/721 (42%), Gaps = 80/721 (11%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L +  V   D G Y 
Sbjct: 253 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLKVGEEDDGEYR 311

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 312 CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 370

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 371 IPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 430

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 431 ADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 490

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 491 DTGRYFCLAANDQNNVTIMANLKVKDATQITQGPRSTIEKKGSRVTFTCQASFDPSLQPS 550

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 551 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 608

Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
                 VP    S+  L+      +  VSW+P   +        Y ++   ++       
Sbjct: 609 VGSPGPVPRLVLSDLHLLT---QSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWY 663

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTV----- 507
            L    G  T+T + K  P      RV A N    G PS +  + VTPE  P        
Sbjct: 664 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVK 722

Query: 508 -QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
            +  E   +  +   L+W+    P    + Y+++++  +GT+ GP  E++  +SDP    
Sbjct: 723 GEGNETTNMVITWKPLRWMDWNAPQ---VQYRVQWRP-QGTR-GPWQEQI--VSDPFLVV 775

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
           +  +   P   Y I +      G G E +    + +   D  +              A+P
Sbjct: 776 SNTSTFVP---YEIKVQAVNSQGKGPEPQ--VTIGYSGEDYPQ--------------AIP 816

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVL-DWRQSELVLANQPTFQPYEIKVVQTWTE- 684
           E+E                  E  N   VL  WR  +L    +   + Y    V  W E 
Sbjct: 817 ELE----------------GIEILNSSAVLVKWRPVDLAQV-KGHLRGYN---VTYWREG 856

Query: 685 ---KDGEGSI-RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 740
              K  +  I ++ +V    +T+  +    P S     V AFNG  +GP SE  +F TPE
Sbjct: 857 SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGSGPASE-FTFSTPE 915

Query: 741 G 741
           G
Sbjct: 916 G 916



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 175/696 (25%), Positives = 264/696 (37%), Gaps = 94/696 (13%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI +G    +LI+ +V+ SD     CE  
Sbjct: 352  LDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRG----ALILSNVQPSDTMVTQCEAR 407

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + +   A +  T    CKA G P P + W+  +G 
Sbjct: 408  NRHGLLLANAY-IYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGT 466

Query: 165  PISQAP---PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q     P     +G     I +L+ +DTG Y C A N    V   +  N+ +  A +
Sbjct: 467  TVLQDERFFPYANGTLG-----IRDLQANDTGRYFCLAANDQNNV--TIMANLKVKDATQ 519

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWI---HNQKELTGGRYTILETGDLKIT 275
            IT+ P+      G  V  TC+    P  +P + W     + +EL       +E G L I 
Sbjct: 520  ITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDGRDLQELGDSDKYFIEDGRLVIH 579

Query: 276  DVAFADSGEYTCFARNKLGTAQGSGSLT-----------VKEHTHITDQPEDYEVEAGQS 324
             + ++D G Y+C A  +L   +    L            V    H+  Q +   V    S
Sbjct: 580  SLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQ---VRVSWS 636

Query: 325  ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF------VQSNDYSLTVTKSSELDSGQ 378
                 NA   P  K  I      E  D E  P        V  N  S T+  S  +    
Sbjct: 637  PAEDHNA---PIEKYDI------EFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYV---H 684

Query: 379  YTCRAQTELDFIEAQ---ATLTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSP 428
            YT R      +   +    + TV  P  AP        +D K         V++W P+  
Sbjct: 685  YTFRVTAINKYGPGEPSPVSETVVTPEAAPEK----NPVDVKGEGNETTNMVITWKPLRW 740

Query: 429  QSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
                     Y+VQ W  +   G  +E IV+      +    FVP      +V A N    
Sbjct: 741  MDWNAPQVQYRVQ-WRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYE---IKVQAVNSQGK 796

Query: 489  GPPSEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QS 543
            GP  ++    + E  P  +  LE I  L SSA  +KW  V   Q  G L GY + Y  + 
Sbjct: 797  GPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGYNVTYWREG 856

Query: 544  VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFK 603
             +       + +   +    TTS  L+GL P + Y + +  +   G G  S++ F  P  
Sbjct: 857  SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGSGPASEFTFSTPEG 916

Query: 604  NPDNVEG---RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ 660
             P + E       +  +L++ W   P + HN     Y + +  H   E        + R 
Sbjct: 917  VPGHPEALHLECQSNTSLLLRW--QPPLSHNGVLTGYVLSY--HPLDEGGKGQLSFNLRD 972

Query: 661  SELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
             EL   N     P   Y  ++  T  E  GE  +RE
Sbjct: 973  PELRTHNLTDLSPHLRYRFQLQATTKEGPGEAIVRE 1008



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 161/389 (41%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS----QGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P + +     Q  +  S  I   + 
Sbjct: 43  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSFTITGNNS 102

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P      E E+V   C  
Sbjct: 103 NFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPV--EVEEGESVVLPCNP 160

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 161 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 218

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 219 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 278

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++  V   D GEY C A N LG+A+ +  +TV+   +   +
Sbjct: 279 PSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHK 338

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++  ++ +  +    +L ++    
Sbjct: 339 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQP 396

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A+     + A A +  VQ+P
Sbjct: 397 SDTMVTQCEARNRHGLLLANAYIYVVQLP 425



 Score = 45.4 bits (106), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 126/320 (39%), Gaps = 60/320 (18%)

Query: 122 VLAAPYFTVE-PEFINAAEEETVTFECKASGLPEPEIHWVHNG---KP-------ISQAP 170
           V+  P  T + P  +     + ++ +C+ASG PE +  W  +G   KP       + Q+P
Sbjct: 31  VMEPPVITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSP 90

Query: 171 PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEAPKDEY 229
            +    +  N     N  +   G Y C A+N LG         +   AP+   E  K   
Sbjct: 91  HSGSFTITGNN---SNFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVE 147

Query: 230 TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL---TGGRYTILETGDLKITDVAFADS-GEY 285
             +G++VVL C    + +P   +  N K L      R T+ + G+L   +V  +D+  +Y
Sbjct: 148 VEEGESVVLPCNPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDY 207

Query: 286 TCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA------------------------ 321
            C        A   G+ T+     I  +P D  V+A                        
Sbjct: 208 ICH-------AHFPGTRTI-----IQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVAL 255

Query: 322 -GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
            GQ     C A   P+   +I WLR S P+   ++    Q+++ +L + K  E D G+Y 
Sbjct: 256 QGQPLVLECIAEGFPT--PTIKWLRPSGPM--PADRVTYQNHNKTLQLLKVGEEDDGEYR 311

Query: 381 CRAQTELDFIEAQATLTVQV 400
           C A+  L        +TV+ 
Sbjct: 312 CLAENSLGSARHAYYVTVEA 331


>gi|121583914|ref|NP_001073520.1| contactin 4 precursor [Danio rerio]
 gi|115313841|gb|AAI24395.1| Zgc:153573 [Danio rerio]
          Length = 1028

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 179/721 (24%), Positives = 303/721 (42%), Gaps = 90/721 (12%)

Query: 47  RNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           +   V L C   G P+P   W + DGVP   + ++        + I + +  D G+Y C 
Sbjct: 242 KGSTVRLECFALGNPVPSISWRRVDGVPF--ARKVDVRKTSGVMEIPYFQQEDAGTYECV 299

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             N  G   S    LS  A+P    +P+ +    ++++ +ECKA+G P+P   W+ NG+ 
Sbjct: 300 AENSKGR-NSVQGKLSFFASPQLIEKPQDVQKPIDDSLVWECKATGKPKPSYRWMKNGEN 358

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +   P   R +V    ++I +L  SD G Y C A N  G VY +  + V+A AP+ ++  
Sbjct: 359 LE--PTEERVQVINGALSITHLALSDIGMYQCVAGNKYGEVYSNAELRVIAVAPDFSQNQ 416

Query: 226 KDEYTV--DGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADS 282
              +T+  +G  V++ C+   +P+  ++W      L    R  +LE+G L+I++V+ +D+
Sbjct: 417 LKSHTLVKEGGDVLIECKPKMSPRGSISWRKGNDALRESSRIAVLESGSLRISNVSKSDA 476

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC ARN+ G A   G+L VKE T IT  P   +V  G+S    C    DPSL+L   
Sbjct: 477 GSYTCVARNQFGEASSLGNLLVKEPTIITTAPNTLDVTVGESIILPCQVSYDPSLELKFT 536

Query: 343 WLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           W    + I F S   +      Q +   + +       +G+YTC  QT++D       L 
Sbjct: 537 WFFNEQLIHFGSHGGYFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSSSIATDLI 596

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSIR 453
           V+ P   P++  + ++ D   A +SW P  P +       Y +Q  T          ++ 
Sbjct: 597 VRGPPGPPTSIHVEEITDT-TATLSWRP-GPDN-HSPITAYTIQARTPFSLGWQAVSTVP 653

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTPEGVP 504
           E++   G   T  V +  P  +   RVLA N    G PS         + +  VTP  V 
Sbjct: 654 EVV--GGSHLTATVIELNPWVEYEFRVLASNAVGTGEPSKPSKKARTKDTVPKVTPANVS 711

Query: 505 GTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
           G   S        S   + W  V  E  NG   GY + ++    T  G +   +P   + 
Sbjct: 712 GGGGS-------RSELVITWEPVPEELQNGAGFGYVVAFRPFGST--GWMQAAVPS-PEA 761

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNN 617
           +    K   + P + +++ +  Y   G+G     +        P + P  +  +  + ++
Sbjct: 762 SKYVFKNETILPFSPFQVKVGAYNNKGEGPFGPVITIYSAEEEPGRAPSRLRAKSLSASD 821

Query: 618 LVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIK 677
           + +SW A+P                               W  S+  +        YE++
Sbjct: 822 VEVSWKALP-------------------------------WSTSKKRVLG------YELR 844

Query: 678 VVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 737
             +   ++D    +R +    G  T   +     +S  +  V A+N A  GPPS +++  
Sbjct: 845 YWEKNEKEDASSVLRTV----GNRTLAIIQGLKGSSTYYITVRAYNTAGTGPPSPVVNIT 900

Query: 738 T 738
           T
Sbjct: 901 T 901



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 158/635 (24%), Positives = 252/635 (39%), Gaps = 78/635 (12%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V + +       ++           P   V+ PE +  
Sbjct: 181 NLYIAKVEPSDVGNYTCVVTNTVTKTQVQGPPTPLILRTDGVMGEYEPKIEVQFPEVVQV 240

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   +G P ++   + R+  G   + I   ++ D G Y 
Sbjct: 241 AKGSTVRLECFALGNPVPSISWRRVDGVPFARK-VDVRKTSG--VMEIPYFQQEDAGTYE 297

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       ++  A +P++ E P+D       ++V  C+  G PKP   W+ N 
Sbjct: 298 CVAENSKGRNSVQGKLSFFA-SPQLIEKPQDVQKPIDDSLVWECKATGKPKPSYRWMKNG 356

Query: 257 KEL--TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTV---------- 304
           + L  T  R  ++  G L IT +A +D G Y C A NK G    +  L V          
Sbjct: 357 ENLEPTEERVQVI-NGALSITHLALSDIGMYQCVAGNKYGEVYSNAELRVIAVAPDFSQN 415

Query: 305 --KEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
             K HT + +         G      C     P  + SI W +G++ +   S    ++S 
Sbjct: 416 QLKSHTLVKE---------GGDVLIECKPKMSP--RGSISWRKGNDALRESSRIAVLESG 464

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV-- 420
             SL ++  S+ D+G YTC A+ +     +   L V+ P    +    + V   +  +  
Sbjct: 465 --SLRISNVSKSDAGSYTCVARNQFGEASSLGNLLVKEPTIITTAPNTLDVTVGESIILP 522

Query: 421 --VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFA 478
             VS++P    SL   F  +  +        G   E +   G+ +  ++       +N  
Sbjct: 523 CQVSYDP----SLELKFTWFFNEQLIHFGSHGGYFEKV--GGQHSAGDI-----MIRNIQ 571

Query: 479 RVLAFNGAYNGP------PSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
             L   G Y          S I + +   G PG   S+    +  +   L W      + 
Sbjct: 572 --LRHAGKYTCAVQTKVDSSSIATDLIVRGPPGPPTSIHVEEITDTTATLSWRPGPDNHS 629

Query: 533 VLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            +  Y I  Q+     +G   +  +P +   +  +A +  L P  +Y   +      G G
Sbjct: 630 PITAYTI--QARTPFSLGWQAVSTVPEVVGGSHLTATVIELNPWVEYEFRVLASNAVGTG 687

Query: 592 AESK------YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
             SK          VP   P NV G G + + LVI+W  +PE   N   F Y + +R   
Sbjct: 688 EPSKPSKKARTKDTVPKVTPANVSGGGGSRSELVITWEPVPEELQNGAGFGYVVAFRPFG 747

Query: 646 TGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
           +   W Q  V     S+ V  N+    F P+++KV
Sbjct: 748 S-TGWMQAAVPSPEASKYVFKNETILPFSPFQVKV 781



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 153/668 (22%), Positives = 267/668 (39%), Gaps = 74/668 (11%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  + P++   Q   G +L I H+  SD G Y C   N  GE  
Sbjct: 340 CKATGKPKPSYRWMKNGENLEPTEERVQVING-ALSITHLALSDIGMYQCVAGNKYGEVY 398

Query: 115 SYSIDLSVLA-APYFTVE--PEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           S + +L V+A AP F+           E   V  ECK    P   I W      + ++  
Sbjct: 399 S-NAELRVIAVAPDFSQNQLKSHTLVKEGGDVLIECKPKMSPRGSISWRKGNDALRESSR 457

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEAPKDEYT 230
               + G  RI+  N+ KSD G+Y C A N  G        N+L   P I T AP     
Sbjct: 458 IAVLESGSLRIS--NVSKSDAGSYTCVARNQFGEA--SSLGNLLVKEPTIITTAPNTLDV 513

Query: 231 VDGKTVVLTCRVFGAPKPEV--NWIHNQK-----------ELTGGRYTILETGDLKITDV 277
             G++++L C+V   P  E+   W  N++           E  GG+++    GD+ I ++
Sbjct: 514 TVGESIILPCQVSYDPSLELKFTWFFNEQLIHFGSHGGYFEKVGGQHS---AGDIMIRNI 570

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE--AGQSATFRCNAVSDP 335
               +G+YTC  + K+ ++  +  L V+        P    VE     +AT       D 
Sbjct: 571 QLRHAGKYTCAVQTKVDSSSIATDLIVRGPP---GPPTSIHVEEITDTTATLSWRPGPDN 627

Query: 336 SLKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
              ++   ++   P         + P  V  +  + TV + +     ++   A   +   
Sbjct: 628 HSPITAYTIQARTPFSLGWQAVSTVPEVVGGSHLTATVIELNPWVEYEFRVLASNAVGTG 687

Query: 391 E-----AQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRG--------HFRG 437
           E      +A     VP   P+N +        + V++W PV P+ L+          FR 
Sbjct: 688 EPSKPSKKARTKDTVPKVTPANVSGGGG-SRSELVITWEPV-PEELQNGAGFGYVVAFRP 745

Query: 438 YKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
           +    W +           V K E+        +P S    +V A+N    GP   +I+ 
Sbjct: 746 FGSTGWMQAAVPSPEASKYVFKNET-------ILPFSPFQVKVGAYNNKGEGPFGPVITI 798

Query: 498 VTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLE 554
            + E  PG   S L A  L +S   + W  +        ++GY+++Y      +    + 
Sbjct: 799 YSAEEEPGRAPSRLRAKSLSASDVEVSWKALPWSTSKKRVLGYELRYWEKNEKEDASSVL 858

Query: 555 RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGR--- 611
           R    +    T A + GL+ S+ Y I +  Y  AG G  S  +     K P +       
Sbjct: 859 R----TVGNRTLAIIQGLKGSSTYYITVRAYNTAGTGPPSPVVNITTKKPPPSQPPSKVM 914

Query: 612 -GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT 670
             ++ + ++++W  +  +E+ +    Y++ +RR+     +++ +V++   + + L+  PT
Sbjct: 915 WNTSNSKIILNWEQVKPLENESEVMGYKVMYRRNR----FSRPNVMETNTTSVELS-LPT 969

Query: 671 FQPYEIKV 678
            + Y I++
Sbjct: 970 DEEYIIQI 977



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 144/378 (38%), Gaps = 41/378 (10%)

Query: 47  RNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCE 105
           ++++V   C   G P P   W  +G  +NP         G +L I H+ +  D G+Y C 
Sbjct: 43  KSREVVFSCEAQGDPPPFYRWKLNGSVVNPKPGSHHSLTGGNLRINHLNKDMDAGTYQCL 102

Query: 106 VSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPE-----IHW 159
            SN  G   S    L+      F T +   ++  E + V   C     P P        W
Sbjct: 103 ASNSFGTIVSREASLTFAYLENFKTHKRSSVSVREGQGVVLLCG----PPPHSGALTFSW 158

Query: 160 VHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY------------ 205
           + N  P S    + RR V      + I  +  SD GNY C  TN++              
Sbjct: 159 IFNEYP-SIVKQDSRRFVSQETGNLYIAKVEPSDVGNYTCVVTNTVTKTQVQGPPTPLIL 217

Query: 206 ----VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG 261
               V  +    +    PE+ +  K      G TV L C   G P P ++W         
Sbjct: 218 RTDGVMGEYEPKIEVQFPEVVQVAK------GSTVRLECFALGNPVPSISWRRVDGVPFA 271

Query: 262 GRYTILET-GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
            +  + +T G ++I      D+G Y C A N  G     G L+      + ++P+D +  
Sbjct: 272 RKVDVRKTSGVMEIPYFQQEDAGTYECVAENSKGRNSVQGKLSFFASPQLIEKPQDVQKP 331

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
              S  + C A   P  K S  W++  E  + E     VQ  + +L++T  +  D G Y 
Sbjct: 332 IDDSLVWECKATGKP--KPSYRWMKNGE--NLEPTEERVQVINGALSITHLALSDIGMYQ 387

Query: 381 CRAQTELDFIEAQATLTV 398
           C A  +   + + A L V
Sbjct: 388 CVAGNKYGEVYSNAELRV 405



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 14/220 (6%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  APS     + + A    VSW  +   + +    GY+++ W EK+ +     ++   G
Sbjct: 805  PGRAPSRLR-AKSLSASDVEVSWKALPWSTSKKRVLGYELRYW-EKNEKEDASSVLRTVG 862

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
              T   +     +S  +  V A+N A  GPPS +++  T +  P    S       +S  
Sbjct: 863  NRTLAIIQGLKGSSTYYITVRAYNTAGTGPPSPVVNITTKKPPPSQPPSKVMWNTSNSKI 922

Query: 521  YLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
             L W  VKP +    +MGYK+ Y+  + ++        P + +  TTS +L+ L    +Y
Sbjct: 923  ILNWEQVKPLENESEVMGYKVMYRRNRFSR--------PNVMETNTTSVELS-LPTDEEY 973

Query: 579  RIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNL 618
             I +  + + G+G+ S+ +  +P  +  N  G  S+ + L
Sbjct: 974  IIQIKPFGEGGEGSSSRQI-TIPRISGPNAIGSASSVSTL 1012


>gi|302565106|ref|NP_001180609.1| neural cell adhesion molecule L1 precursor [Pan troglodytes]
          Length = 1257

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 197/721 (27%), Positives = 305/721 (42%), Gaps = 80/721 (11%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L +  V   D G Y 
Sbjct: 253 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLKVGEEDDGEYR 311

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 312 CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 370

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 371 IPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 430

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 431 ADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 490

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 491 DTGRYFCLAANDQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPS 550

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 551 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 608

Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
                 VP    S+  L+      +  VSW+P   +        Y ++   ++       
Sbjct: 609 VGSPGPVPRLVLSDLHLLT---QSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWY 663

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTV----- 507
            L    G  T+T + K  P      RV A N    G PS +  + VTPE  P        
Sbjct: 664 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPMDVK 722

Query: 508 -QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
            +  E   +  +   L+W+    P    + Y+++++  +GT+ GP  E++  +SDP    
Sbjct: 723 GEGNETTNMVITWKPLRWMDWNAPQ---VQYRVQWRP-QGTR-GPWQEQI--VSDPFLVV 775

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
           +  +   P   Y I +      G G E +    + +   D  +              A+P
Sbjct: 776 SNTSTFVP---YEIKVQAVNSQGKGPEPQ--VTIGYSGEDYPQ--------------AIP 816

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVL-DWRQSELVLANQPTFQPYEIKVVQTWTE- 684
           E+E                  E  N   VL  WR  +L    +   + Y    V  W E 
Sbjct: 817 ELE----------------GIEILNSSAVLVKWRPVDLAQV-KGHLRGYN---VTYWREG 856

Query: 685 ---KDGEGSI-RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 740
              K  +  I ++ +V    +T+  +    P S     V AFNG  +GP SE  +F TPE
Sbjct: 857 SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGSGPASE-FTFSTPE 915

Query: 741 G 741
           G
Sbjct: 916 G 916



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 164/690 (23%), Positives = 265/690 (38%), Gaps = 82/690 (11%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI +G    +LI+ +V+ SD     CE  
Sbjct: 352  LDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRG----ALILSNVQPSDTMVTQCEAR 407

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + +   A +  T    CKA G P P + W+  +G 
Sbjct: 408  NRHGLLLANAY-IYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGT 466

Query: 165  PISQAP---PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q     P     +G     I +L+ +DTG Y C A N    V   +  N+ +  A +
Sbjct: 467  TVLQDERFFPYANGTLG-----IRDLQANDTGRYFCLAANDQNNV--TIVANLKVKDATQ 519

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWIHNQKELTGGRYTILETGDLKITDVA 278
            IT+ P+      G  V  TC+    P  +P + W  + ++L        E GD   +D  
Sbjct: 520  ITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITWRGDGRDLQ-------ELGD---SDKY 569

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL- 337
            F + G     + +   + QG+ S        + +      V        R   +SD  L 
Sbjct: 570  FIEDGRLVIHSLDY--SDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRL-VLSDLHLL 626

Query: 338  ---KLSIVWLRGSE---PI---DFESEPRFVQSND-YSLTVTKSSELDSG-------QYT 380
               ++ + W    +   PI   D E E + +     YSL     ++  +         YT
Sbjct: 627  TQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYVHYT 686

Query: 381  CRAQTELDFIEAQ---ATLTVQVPLEAPSNFTLI---QVIDAKKAVVSWNPVSPQSLRGH 434
             R      +   +    + TV  P  AP    +    +  +    V++W P+        
Sbjct: 687  FRVTAINKYGPGEPSPVSETVVTPEAAPEKNPMDVKGEGNETTNMVITWKPLRWMDWNAP 746

Query: 435  FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
               Y+VQ W  +   G  +E IV+      +    FVP      +V A N    GP  ++
Sbjct: 747  QVQYRVQ-WRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYE---IKVQAVNSQGKGPEPQV 802

Query: 495  ISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVKGTKV 549
                + E  P  +  LE I  L SSA  +KW  V   Q  G L GY + Y  +  +    
Sbjct: 803  TIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGYNVTYWREGSQRKHS 862

Query: 550  GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF---KNPD 606
               + +   +    TTS  L+GL P + Y + +  +   G G  S++ F  P     +P+
Sbjct: 863  KRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGSGPASEFTFSTPEGVPGHPE 922

Query: 607  NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLA 666
             +     +  +L++ W   P + HN     Y + +  H   E        + R  EL   
Sbjct: 923  ALHLECQSNTSLLLRW--QPPLSHNGVLTGYVLSY--HPLDEGGKGQLSFNLRDPELRTH 978

Query: 667  NQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
            N     P   Y  ++  T  E  GE  +RE
Sbjct: 979  NLTDLSPHLRYRFQLQATTKEGPGEAIVRE 1008



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 161/389 (41%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS----QGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P + +     Q  +  S  I   + 
Sbjct: 43  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSFTITGNNS 102

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P      E E+V   C  
Sbjct: 103 NFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPV--EVEEGESVVLPCNP 160

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 161 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 218

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 219 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 278

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++  V   D GEY C A N LG+A+ +  +TV+   +   +
Sbjct: 279 PSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHK 338

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++  ++ +  +    +L ++    
Sbjct: 339 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQP 396

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A+     + A A +  VQ+P
Sbjct: 397 SDTMVTQCEARNRHGLLLANAYIYVVQLP 425



 Score = 45.4 bits (106), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 126/320 (39%), Gaps = 60/320 (18%)

Query: 122 VLAAPYFTVE-PEFINAAEEETVTFECKASGLPEPEIHWVHNG---KP-------ISQAP 170
           V+  P  T + P  +     + ++ +C+ASG PE +  W  +G   KP       + Q+P
Sbjct: 31  VMEPPVITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSP 90

Query: 171 PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEAPKDEY 229
            +    +  N     N  +   G Y C A+N LG         +   AP+   E  K   
Sbjct: 91  HSGSFTITGNN---SNFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVE 147

Query: 230 TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL---TGGRYTILETGDLKITDVAFADS-GEY 285
             +G++VVL C    + +P   +  N K L      R T+ + G+L   +V  +D+  +Y
Sbjct: 148 VEEGESVVLPCNPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDY 207

Query: 286 TCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA------------------------ 321
            C        A   G+ T+     I  +P D  V+A                        
Sbjct: 208 ICH-------AHFPGTRTI-----IQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVAL 255

Query: 322 -GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
            GQ     C A   P+   +I WLR S P+   ++    Q+++ +L + K  E D G+Y 
Sbjct: 256 QGQPLVLECIAEGFPT--PTIKWLRPSGPM--PADRVTYQNHNKTLQLLKVGEEDDGEYR 311

Query: 381 CRAQTELDFIEAQATLTVQV 400
           C A+  L        +TV+ 
Sbjct: 312 CLAENSLGSARHAYYVTVEA 331


>gi|13435353|ref|NP_076493.1| neural cell adhesion molecule L1 isoform 2 precursor [Homo sapiens]
 gi|347807|gb|AAA59476.1| cell adhesion molecule L1 [Homo sapiens]
          Length = 1253

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 197/721 (27%), Positives = 305/721 (42%), Gaps = 80/721 (11%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L +  V   D G Y 
Sbjct: 253 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLKVGEEDDGEYR 311

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 312 CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 370

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 371 IPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 430

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 431 ADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 490

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 491 DTGRYFCLAANDQNNVTIMANLKVKDATQITQGPRSTIEKKGSRVTFTCQASFDPSLQPS 550

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 551 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 608

Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
                 VP    S+  L+      +  VSW+P   +        Y ++   ++       
Sbjct: 609 VGSPGPVPRLVLSDLHLLT---QSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWY 663

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTV----- 507
            L    G  T+T + K  P      RV A N    G PS +  + VTPE  P        
Sbjct: 664 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVK 722

Query: 508 -QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
            +  E   +  +   L+W+    P    + Y+++++  +GT+ GP  E++  +SDP    
Sbjct: 723 GEGNETTNMVITWKPLRWMDWNAPQ---VQYRVQWRP-QGTR-GPWQEQI--VSDPFLVV 775

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
           +  +   P   Y I +      G G E +    + +   D  +              A+P
Sbjct: 776 SNTSTFVP---YEIKVQAVNSQGKGPEPQ--VTIGYSGEDYPQ--------------AIP 816

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVL-DWRQSELVLANQPTFQPYEIKVVQTWTE- 684
           E+E                  E  N   VL  WR  +L    +   + Y    V  W E 
Sbjct: 817 ELE----------------GIEILNSSAVLVKWRPVDLAQV-KGHLRGYN---VTYWREG 856

Query: 685 ---KDGEGSI-RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 740
              K  +  I ++ +V    +T+  +    P S     V AFNG  +GP SE  +F TPE
Sbjct: 857 SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGSGPASE-FTFSTPE 915

Query: 741 G 741
           G
Sbjct: 916 G 916



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 175/696 (25%), Positives = 264/696 (37%), Gaps = 94/696 (13%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI +G    +LI+ +V+ SD     CE  
Sbjct: 352  LDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRG----ALILSNVQPSDTMVTQCEAR 407

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + +   A +  T    CKA G P P + W+  +G 
Sbjct: 408  NRHGLLLANAY-IYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGT 466

Query: 165  PISQAP---PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q     P     +G     I +L+ +DTG Y C A N    V   +  N+ +  A +
Sbjct: 467  TVLQDERFFPYANGTLG-----IRDLQANDTGRYFCLAANDQNNV--TIMANLKVKDATQ 519

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWI---HNQKELTGGRYTILETGDLKIT 275
            IT+ P+      G  V  TC+    P  +P + W     + +EL       +E G L I 
Sbjct: 520  ITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDGRDLQELGDSDKYFIEDGRLVIH 579

Query: 276  DVAFADSGEYTCFARNKLGTAQGSGSLT-----------VKEHTHITDQPEDYEVEAGQS 324
             + ++D G Y+C A  +L   +    L            V    H+  Q +   V    S
Sbjct: 580  SLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQ---VRVSWS 636

Query: 325  ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF------VQSNDYSLTVTKSSELDSGQ 378
                 NA   P  K  I      E  D E  P        V  N  S T+  S  +    
Sbjct: 637  PAEDHNA---PIEKYDI------EFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYV---H 684

Query: 379  YTCRAQTELDFIEAQ---ATLTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSP 428
            YT R      +   +    + TV  P  AP        +D K         V++W P+  
Sbjct: 685  YTFRVTAINKYGPGEPSPVSETVVTPEAAPEK----NPVDVKGEGNETTNMVITWKPLRW 740

Query: 429  QSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
                     Y+VQ W  +   G  +E IV+      +    FVP      +V A N    
Sbjct: 741  MDWNAPQVQYRVQ-WRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYE---IKVQAVNSQGK 796

Query: 489  GPPSEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QS 543
            GP  ++    + E  P  +  LE I  L SSA  +KW  V   Q  G L GY + Y  + 
Sbjct: 797  GPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGYNVTYWREG 856

Query: 544  VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFK 603
             +       + +   +    TTS  L+GL P + Y + +  +   G G  S++ F  P  
Sbjct: 857  SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGSGPASEFTFSTPEG 916

Query: 604  NPDNVEG---RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ 660
             P + E       +  +L++ W   P + HN     Y + +  H   E        + R 
Sbjct: 917  VPGHPEALHLECQSNTSLLLRW--QPPLSHNGVLTGYVLSY--HPLDEGGKGQLSFNLRD 972

Query: 661  SELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
             EL   N     P   Y  ++  T  E  GE  +RE
Sbjct: 973  PELRTHNLTDLSPHLRYRFQLQATTKEGPGEAIVRE 1008



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 161/389 (41%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS----QGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P + +     Q  +  S  I   + 
Sbjct: 43  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSFTITGNNS 102

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P      E E+V   C  
Sbjct: 103 NFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPV--EVEEGESVVLPCNP 160

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 161 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 218

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 219 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 278

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++  V   D GEY C A N LG+A+ +  +TV+   +   +
Sbjct: 279 PSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHK 338

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++  ++ +  +    +L ++    
Sbjct: 339 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQP 396

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A+     + A A +  VQ+P
Sbjct: 397 SDTMVTQCEARNRHGLLLANAYIYVVQLP 425



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 126/320 (39%), Gaps = 60/320 (18%)

Query: 122 VLAAPYFTVE-PEFINAAEEETVTFECKASGLPEPEIHWVHNG---KP-------ISQAP 170
           V+  P  T + P  +     + ++ +C+ASG PE +  W  +G   KP       + Q+P
Sbjct: 31  VMEPPVITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSP 90

Query: 171 PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEAPKDEY 229
            +    +  N     N  +   G Y C A+N LG         +   AP+   E  K   
Sbjct: 91  HSGSFTITGNN---SNFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVE 147

Query: 230 TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL---TGGRYTILETGDLKITDVAFADS-GEY 285
             +G++VVL C    + +P   +  N K L      R T+ + G+L   +V  +D+  +Y
Sbjct: 148 VEEGESVVLPCNPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDY 207

Query: 286 TCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA------------------------ 321
            C        A   G+ T+     I  +P D  V+A                        
Sbjct: 208 ICH-------AHFPGTRTI-----IQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVAL 255

Query: 322 -GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
            GQ     C A   P+   +I WLR S P+   ++    Q+++ +L + K  E D G+Y 
Sbjct: 256 QGQPLVLECIAEGFPT--PTIKWLRPSGPM--PADRVTYQNHNKTLQLLKVGEEDDGEYR 311

Query: 381 CRAQTELDFIEAQATLTVQV 400
           C A+  L        +TV+ 
Sbjct: 312 CLAENSLGSARHAYYVTVEA 331


>gi|33354077|dbj|BAC81122.1| L1 cell adhesion molecule [Homo sapiens]
          Length = 1255

 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 197/721 (27%), Positives = 305/721 (42%), Gaps = 80/721 (11%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L +  V   D G Y 
Sbjct: 251 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLKVGEEDDGEYR 309

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 310 CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 368

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 369 IPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 428

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 429 ADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 488

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 489 DTGRYFCLAANDQNNVTIMANLKVKDATQITQGPRSTIEKKGSRVTFTCQASFDPSLQPS 548

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 549 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 606

Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
                 VP    S+  L+      +  VSW+P   +        Y ++   ++       
Sbjct: 607 VGSPGPVPRLVLSDLHLLT---QSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWY 661

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTV----- 507
            L    G  T+T + K  P      RV A N    G PS +  + VTPE  P        
Sbjct: 662 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVK 720

Query: 508 -QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
            +  E   +  +   L+W+    P    + Y+++++  +GT+ GP  E++  +SDP    
Sbjct: 721 GEGNETTNMVITWKPLRWMDWNAPQ---VQYRVQWRP-QGTR-GPWQEQI--VSDPFLVV 773

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
           +  +   P   Y I +      G G E +    + +   D  +              A+P
Sbjct: 774 SNTSTFVP---YEIKVQAVNSQGKGPEPQ--VTIGYSGEDYPQ--------------AIP 814

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVL-DWRQSELVLANQPTFQPYEIKVVQTWTE- 684
           E+E                  E  N   VL  WR  +L    +   + Y    V  W E 
Sbjct: 815 ELE----------------GIEILNSSAVLVKWRPVDLAQV-KGHLRGYN---VTYWREG 854

Query: 685 ---KDGEGSI-RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 740
              K  +  I ++ +V    +T+  +    P S     V AFNG  +GP SE  +F TPE
Sbjct: 855 SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGSGPASE-FTFSTPE 913

Query: 741 G 741
           G
Sbjct: 914 G 914



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 174/696 (25%), Positives = 265/696 (38%), Gaps = 94/696 (13%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI +G    +LI+ +V+ SD     CE  
Sbjct: 350  LDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRG----ALILSNVQPSDTMVTQCEAR 405

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + +   A +  T    CKA G P P + W+  +G 
Sbjct: 406  NRHGLLLANAY-IYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGT 464

Query: 165  PISQAP---PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q     P     +G     I +L+ +DTG Y C A N    V   +  N+ +  A +
Sbjct: 465  TVLQDERFFPYANGTLG-----IRDLQANDTGRYFCLAANDQNNV--TIMANLKVKDATQ 517

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWI---HNQKELTGGRYTILETGDLKIT 275
            IT+ P+      G  V  TC+    P  +P + W     + +EL       +E G L I 
Sbjct: 518  ITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDGRDLQELGDSDKYFIEDGRLVIH 577

Query: 276  DVAFADSGEYTCFARNKLGTAQGSGSLT-----------VKEHTHITDQPEDYEVEAGQS 324
             + ++D G Y+C A  +L   +    L            V    H+  Q +   V    S
Sbjct: 578  SLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQ---VRVSWS 634

Query: 325  ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF------VQSNDYSLTVTKSSELDSGQ 378
                 NA   P  K  I      E  D E  P        V  N  S T+  S  +    
Sbjct: 635  PAEDHNA---PIEKYDI------EFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYV---H 682

Query: 379  YTCRAQTELDFIEAQ---ATLTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSP 428
            YT R      +   +    + TV  P  AP        +D K         V++W P+  
Sbjct: 683  YTFRVTAINKYGPGEPSPVSETVVTPEAAPEK----NPVDVKGEGNETTNMVITWKPLRW 738

Query: 429  QSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
                     Y+VQ W  +   G  +E IV+      +    FVP      +V A N    
Sbjct: 739  MDWNAPQVQYRVQ-WRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYE---IKVQAVNSQGK 794

Query: 489  GPPSEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QS 543
            GP  ++    + E  P  +  LE I  L SSA  +KW  V   Q  G L GY + Y  + 
Sbjct: 795  GPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGYNVTYWREG 854

Query: 544  VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF- 602
             +       + +   +    TTS  L+GL P + Y + +  +   G G  S++ F  P  
Sbjct: 855  SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGSGPASEFTFSTPEG 914

Query: 603  --KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ 660
               +P+ +     +  +L++ W   P + HN     Y + +  H   E        + R 
Sbjct: 915  VPGHPEALHLECQSNTSLLLRW--QPPLSHNGVLTGYVLSY--HPLDEGGKGQLSFNLRD 970

Query: 661  SELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
             EL   N     P   Y  ++  T  E  GE  +RE
Sbjct: 971  PELRTHNLTDLSPHLRYRFQLQATTKEGPGEAIVRE 1006



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 161/389 (41%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS----QGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P + +     Q  +  S  I   + 
Sbjct: 41  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSFTITGNNS 100

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P      E E+V   C  
Sbjct: 101 NFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPV--EVEEGESVVLPCNP 158

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 159 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 216

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 217 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 276

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++  V   D GEY C A N LG+A+ +  +TV+   +   +
Sbjct: 277 PSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHK 336

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++  ++ +  +    +L ++    
Sbjct: 337 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQP 394

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A+     + A A +  VQ+P
Sbjct: 395 SDTMVTQCEARNRHGLLLANAYIYVVQLP 423



 Score = 45.4 bits (106), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 126/320 (39%), Gaps = 60/320 (18%)

Query: 122 VLAAPYFTVE-PEFINAAEEETVTFECKASGLPEPEIHWVHNG---KP-------ISQAP 170
           V+  P  T + P  +     + ++ +C+ASG PE +  W  +G   KP       + Q+P
Sbjct: 29  VMEPPVITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSP 88

Query: 171 PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEAPKDEY 229
            +    +  N     N  +   G Y C A+N LG         +   AP+   E  K   
Sbjct: 89  HSGSFTITGNN---SNFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVE 145

Query: 230 TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL---TGGRYTILETGDLKITDVAFADS-GEY 285
             +G++VVL C    + +P   +  N K L      R T+ + G+L   +V  +D+  +Y
Sbjct: 146 VEEGESVVLPCNPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDY 205

Query: 286 TCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA------------------------ 321
            C        A   G+ T+     I  +P D  V+A                        
Sbjct: 206 ICH-------AHFPGTRTI-----IQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVAL 253

Query: 322 -GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
            GQ     C A   P+   +I WLR S P+   ++    Q+++ +L + K  E D G+Y 
Sbjct: 254 QGQPLVLECIAEGFPT--PTIKWLRPSGPM--PADRVTYQNHNKTLQLLKVGEEDDGEYR 309

Query: 381 CRAQTELDFIEAQATLTVQV 400
           C A+  L        +TV+ 
Sbjct: 310 CLAENSLGSARHAYYVTVEA 329


>gi|221316760|ref|NP_001137435.1| neural cell adhesion molecule L1 isoform 3 precursor [Homo sapiens]
 gi|119593193|gb|EAW72787.1| L1 cell adhesion molecule, isoform CRA_a [Homo sapiens]
          Length = 1248

 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 197/721 (27%), Positives = 305/721 (42%), Gaps = 80/721 (11%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L +  V   D G Y 
Sbjct: 248 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLKVGEEDDGEYR 306

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 307 CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 365

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 366 IPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 425

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 426 ADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 485

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 486 DTGRYFCLAANDQNNVTIMANLKVKDATQITQGPRSTIEKKGSRVTFTCQASFDPSLQPS 545

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 546 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 603

Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
                 VP    S+  L+      +  VSW+P    +       Y ++   ++       
Sbjct: 604 VGSPGPVPRLVLSDLHLLT---QSQVRVSWSPAEDHN--APIEKYDIEFEDKEMAPEKWY 658

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTV----- 507
            L    G  T+T + K  P      RV A N    G PS +  + VTPE  P        
Sbjct: 659 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVK 717

Query: 508 -QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
            +  E   +  +   L+W+    P    + Y+++++  +GT+ GP  E++  +SDP    
Sbjct: 718 GEGNETTNMVITWKPLRWMDWNAPQ---VQYRVQWRP-QGTR-GPWQEQI--VSDPFLVV 770

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
           +  +   P   Y I +      G G E +    + +   D  +              A+P
Sbjct: 771 SNTSTFVP---YEIKVQAVNSQGKGPEPQ--VTIGYSGEDYPQ--------------AIP 811

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVL-DWRQSELVLANQPTFQPYEIKVVQTWTE- 684
           E+E                  E  N   VL  WR  +L    +   + Y    V  W E 
Sbjct: 812 ELE----------------GIEILNSSAVLVKWRPVDLAQV-KGHLRGYN---VTYWREG 851

Query: 685 ---KDGEGSI-RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 740
              K  +  I ++ +V    +T+  +    P S     V AFNG  +GP SE  +F TPE
Sbjct: 852 SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGSGPASE-FTFSTPE 910

Query: 741 G 741
           G
Sbjct: 911 G 911



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 174/696 (25%), Positives = 265/696 (38%), Gaps = 94/696 (13%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI +G    +LI+ +V+ SD     CE  
Sbjct: 347  LDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRG----ALILSNVQPSDTMVTQCEAR 402

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + +   A +  T    CKA G P P + W+  +G 
Sbjct: 403  NRHGLLLANAY-IYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGT 461

Query: 165  PISQAP---PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q     P     +G     I +L+ +DTG Y C A N    V   +  N+ +  A +
Sbjct: 462  TVLQDERFFPYANGTLG-----IRDLQANDTGRYFCLAANDQNNV--TIMANLKVKDATQ 514

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWI---HNQKELTGGRYTILETGDLKIT 275
            IT+ P+      G  V  TC+    P  +P + W     + +EL       +E G L I 
Sbjct: 515  ITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDGRDLQELGDSDKYFIEDGRLVIH 574

Query: 276  DVAFADSGEYTCFARNKLGTAQGSGSLT-----------VKEHTHITDQPEDYEVEAGQS 324
             + ++D G Y+C A  +L   +    L            V    H+  Q +   V    S
Sbjct: 575  SLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQ---VRVSWS 631

Query: 325  ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF------VQSNDYSLTVTKSSELDSGQ 378
                 NA   P  K  I      E  D E  P        V  N  S T+  S  +    
Sbjct: 632  PAEDHNA---PIEKYDI------EFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYV---H 679

Query: 379  YTCRAQTELDFIEAQ---ATLTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSP 428
            YT R      +   +    + TV  P  AP        +D K         V++W P+  
Sbjct: 680  YTFRVTAINKYGPGEPSPVSETVVTPEAAPEK----NPVDVKGEGNETTNMVITWKPLRW 735

Query: 429  QSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
                     Y+VQ W  +   G  +E IV+      +    FVP      +V A N    
Sbjct: 736  MDWNAPQVQYRVQ-WRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYE---IKVQAVNSQGK 791

Query: 489  GPPSEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QS 543
            GP  ++    + E  P  +  LE I  L SSA  +KW  V   Q  G L GY + Y  + 
Sbjct: 792  GPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGYNVTYWREG 851

Query: 544  VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF- 602
             +       + +   +    TTS  L+GL P + Y + +  +   G G  S++ F  P  
Sbjct: 852  SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGSGPASEFTFSTPEG 911

Query: 603  --KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ 660
               +P+ +     +  +L++ W   P + HN     Y + +  H   E        + R 
Sbjct: 912  VPGHPEALHLECQSNTSLLLRW--QPPLSHNGVLTGYVLSY--HPLDEGGKGQLSFNLRD 967

Query: 661  SELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
             EL   N     P   Y  ++  T  E  GE  +RE
Sbjct: 968  PELRTHNLTDLSPHLRYRFQLQATTKEGPGEAIVRE 1003



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 161/389 (41%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS----QGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P + +     Q  +  S  I   + 
Sbjct: 38  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSFTITGNNS 97

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P      E E+V   C  
Sbjct: 98  NFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPV--EVEEGESVVLPCNP 155

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 156 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 213

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 214 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 273

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++  V   D GEY C A N LG+A+ +  +TV+   +   +
Sbjct: 274 PSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHK 333

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++  ++ +  +    +L ++    
Sbjct: 334 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQP 391

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A+     + A A +  VQ+P
Sbjct: 392 SDTMVTQCEARNRHGLLLANAYIYVVQLP 420


>gi|449272003|gb|EMC82133.1| Contactin-1, partial [Columba livia]
          Length = 946

 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 190/735 (25%), Positives = 309/735 (42%), Gaps = 104/735 (14%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P+  WSK   P+  S  IS    G  L I 
Sbjct: 202 PADIKVKFKDTYALLGQNVTLECFALGNPVPELRWSKYLEPMPASAEISMS--GAVLKIF 259

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           ++++ D+G Y CE  N  G+ K +   + V AAP +    E IN  E++    + + C A
Sbjct: 260 NIQYEDEGLYECEAENYKGKDK-HQARIYVQAAPEWV---EHINDTEKDIGSDLYWPCVA 315

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +             + +++L   D G Y C A N+ G +Y +
Sbjct: 316 TGKPMPTIRWLKNGASFRKG-----------ELRMQSLTFDDAGMYQCIAENTHGIIYAN 364

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTI 266
             + ++A  P  E+    K      G  V++ C+   APKP+ +W    + L  G R  I
Sbjct: 365 AELKIVASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTELLVNGTRIRI 424

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            + G L+I ++   D G YTCFA N  G A  +G L + E T IT  P + +V  G++AT
Sbjct: 425 WDDGSLEIVNITKLDEGRYTCFAENNRGKANSTGVLEMTEATRITLAPLNVDVTVGENAT 484

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN-----DYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ +W      IDFE E    + N     +  L +       +G+YTC
Sbjct: 485 MQCIASHDPTLDLTFIWSLNGFVIDFEKEHEHYERNVMIKSNGELLIKNVQLRHAGRYTC 544

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGH 434
            AQT +D   A A L V+ P   P    + ++ D   A ++W       +P+S  +++  
Sbjct: 545 TAQTIVDNSSASADLVVRGPPGPPGGIRVEEIRDTAVA-LTWSRGTDNHSPISKYTIQS- 602

Query: 435 FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
            + +  + W +   + S  E     G   +  V   +P  +   R++A N    G PS  
Sbjct: 603 -KTFLSEEWKDAKTDPSDIE-----GNMESATVIDLIPWMEYEFRIIATNTLGTGEPSMP 656

Query: 495 ISFVTPEGVPGTVQSLEAIPLGSS--AFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVG 550
              +  EG P  V   +    G S     + W  +  E   G   GY + ++       G
Sbjct: 657 SQRIRTEGAPPNVAPSDVGGGGGSNRELTITWMPLSREYHYGNNFGYIVAFKP-----FG 711

Query: 551 PLLERLPYISDPTTTS--AKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFY----VPFK 603
               R   +++P       K   + PST+Y++ +  +   GDG  S   + Y     P +
Sbjct: 712 EKEWRRVTVTNPEIGRYVHKDESMPPSTQYQVKVKAFNNKGDGPFSLTAVIYSAQDAPTE 771

Query: 604 NPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSEL 663
            P +V  +  + + + +SW                     H+  +               
Sbjct: 772 IPTDVSIKVLSSSEMSVSW---------------------HHVSDK-------------- 796

Query: 664 VLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN 723
                 + + Y+I+    W   D E + + + V+  E  +T+++   P ++    V AFN
Sbjct: 797 ------SVEGYQIRY---WAAHDKEAAAQRVQVSNQE-YSTKLENLKPNTRYHVDVSAFN 846

Query: 724 GAYNGPPSEIISFVT 738
            A  GPPS  I  +T
Sbjct: 847 SAGYGPPSRTIDVIT 861



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 140/642 (21%), Positives = 244/642 (38%), Gaps = 102/642 (15%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C+  G P+P   W K+G      +          L ++ + F D G Y C   N  G   
Sbjct: 313 CVATGKPMPTIRWLKNGASFRKGE----------LRMQSLTFDDAGMYQCIAENTHGIIY 362

Query: 115 SYSIDLSVLAAP-YFTVEP--EFINAAEEETVTFECKASGLPEPEIHW------VHNGKP 165
           + + +L ++A+P  F + P  + I AA+   V  ECK    P+P+  W      + NG  
Sbjct: 363 A-NAELKIVASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTELLVNGTR 421

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           I        R      + I N+ K D G Y C A N+ G       V  +  A  IT AP
Sbjct: 422 I--------RIWDDGSLEIVNITKLDEGRYTCFAENNRGKA-NSTGVLEMTEATRITLAP 472

Query: 226 KDEYTVDGKTVVLTCRVFGAPKPEVNWI----------HNQKELTGGRYTILETGDLKIT 275
            +     G+   + C     P  ++ +I            + E       I   G+L I 
Sbjct: 473 LNVDVTVGENATMQCIASHDPTLDLTFIWSLNGFVIDFEKEHEHYERNVMIKSNGELLIK 532

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           +V    +G YTC A+  +  +  S  L V+                      R   + D 
Sbjct: 533 NVQLRHAGRYTCTAQTIVDNSSASADLVVRGPPG-------------PPGGIRVEEIRDT 579

Query: 336 SLKLSIVWLRGSE---PI----------------DFESEPRFVQSNDYSLTVTKSSELDS 376
           ++ L+  W RG++   PI                D +++P  ++ N  S TV        
Sbjct: 580 AVALT--WSRGTDNHSPISKYTIQSKTFLSEEWKDAKTDPSDIEGNMESATVIDLIPWME 637

Query: 377 GQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDA----KKAVVSWNPVSPQSLR 432
            ++   A   L   E            AP N     V       ++  ++W P+S +   
Sbjct: 638 YEFRIIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNRELTITWMPLSREYHY 697

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFV-------PASKNFARVLAFNG 485
           G+  GY V    +  GE   R + V     T  E+ ++V       P+++   +V AFN 
Sbjct: 698 GNNFGYIVAF--KPFGEKEWRRVTV-----TNPEIGRYVHKDESMPPSTQYQVKVKAFNN 750

Query: 486 AYNGPPSEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
             +GP S      + +  P  + +  +I  L SS   + W      +  + GY+I+Y + 
Sbjct: 751 KGDGPFSLTAVIYSAQDAPTEIPTDVSIKVLSSSEMSVSW--HHVSDKSVEGYQIRYWAA 808

Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKN 604
              +     +R+   +   +T  KL  L+P+T+Y + ++ +  AG G  S+ +  +  K 
Sbjct: 809 HDKEAA--AQRVQVSNQEYST--KLENLKPNTRYHVDVSAFNSAGYGPPSRTIDVITRKA 864

Query: 605 PDNVEGR----GSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           P +   R      + +  +I+W  +    + +    Y++ +R
Sbjct: 865 PPSQRPRIISSVRSGSRYIITWDHVEAKSNESAVEGYKVLYR 906



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 145/383 (37%), Gaps = 48/383 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           +V + C     P P   W  +   I+ + DR S    G  L+I + E S D G Y C VS
Sbjct: 22  QVSMNCRARAIPFPTYRWKLNNWDIDLTKDRYSM--VGGRLVINNPEKSRDAGKYVCVVS 79

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--------W 159
           N  G  +SY   LS      F  E  +     E  V     A  L EP  H        W
Sbjct: 80  NIFGTVRSYEATLSFGYLDPFPPEERY-----EVKVREGVGAVLLCEPPYHYPDDLSYRW 134

Query: 160 VHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAH 217
           + N  P+  A  + RR V      + I N+  SD GNY C  ++    + K V+   +  
Sbjct: 135 LLNEFPVFIA-LDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIPL 191

Query: 218 APEITEAP----------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            P+   A           KD Y + G+ V L C   G P PE+ W    + +       +
Sbjct: 192 IPQSDRAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELRWSKYLEPMPASAEISM 251

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               LKI ++ + D G Y C A N  G  +    + V+      +   D E + G    +
Sbjct: 252 SGAVLKIFNIQYEDEGLYECEAENYKGKDKHQARIYVQAAPEWVEHINDTEKDIGSDLYW 311

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P    +I WL+      F      +QS  +          D+G Y C A+   
Sbjct: 312 PCVATGKP--MPTIRWLKNGA--SFRKGELRMQSLTFD---------DAGMYQCIAENTH 358

Query: 388 DFIEAQATLTVQVPLEAPSNFTL 410
             I A A L +   + +P  F L
Sbjct: 359 GIIYANAELKI---VASPPTFEL 378


>gi|410335591|gb|JAA36742.1| L1 cell adhesion molecule [Pan troglodytes]
          Length = 1248

 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 197/721 (27%), Positives = 305/721 (42%), Gaps = 80/721 (11%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L +  V   D G Y 
Sbjct: 248 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLKVGEEDDGEYR 306

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 307 CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 365

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 366 IPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 425

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 426 ADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 485

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 486 DTGRYFCLAANDQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPS 545

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 546 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 603

Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
                 VP    S+  L+      +  VSW+P    +       Y ++   ++       
Sbjct: 604 VGSPGPVPRLVLSDLHLLT---QSQVRVSWSPAEDHN--APIEKYDIEFEDKEMAPEKWY 658

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTV----- 507
            L    G  T+T + K  P      RV A N    G PS +  + VTPE  P        
Sbjct: 659 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPMDVK 717

Query: 508 -QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
            +  E   +  +   L+W+    P    + Y+++++  +GT+ GP  E++  +SDP    
Sbjct: 718 GEGNETTNMVITWKPLRWMDWNAPQ---VQYRVQWRP-QGTR-GPWQEQI--VSDPFLVV 770

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
           +  +   P   Y I +      G G E +    + +   D  +              A+P
Sbjct: 771 SNTSTFVP---YEIKVQAVNSQGKGPEPQ--VTIGYSGEDYPQ--------------AIP 811

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVL-DWRQSELVLANQPTFQPYEIKVVQTWTE- 684
           E+E                  E  N   VL  WR  +L    +   + Y    V  W E 
Sbjct: 812 ELE----------------GIEILNSSAVLVKWRPVDLAQV-KGHLRGYN---VTYWREG 851

Query: 685 ---KDGEGSI-RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 740
              K  +  I ++ +V    +T+  +    P S     V AFNG  +GP SE  +F TPE
Sbjct: 852 SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGSGPASE-FTFSTPE 910

Query: 741 G 741
           G
Sbjct: 911 G 911



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 164/690 (23%), Positives = 265/690 (38%), Gaps = 82/690 (11%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI +G    +LI+ +V+ SD     CE  
Sbjct: 347  LDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRG----ALILSNVQPSDTMVTQCEAR 402

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + +   A +  T    CKA G P P + W+  +G 
Sbjct: 403  NRHGLLLANAY-IYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGT 461

Query: 165  PISQAP---PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q     P     +G     I +L+ +DTG Y C A N    V   +  N+ +  A +
Sbjct: 462  TVLQDERFFPYANGTLG-----IRDLQANDTGRYFCLAANDQNNV--TIVANLKVKDATQ 514

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWIHNQKELTGGRYTILETGDLKITDVA 278
            IT+ P+      G  V  TC+    P  +P + W  + ++L        E GD   +D  
Sbjct: 515  ITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITWRGDGRDLQ-------ELGD---SDKY 564

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL- 337
            F + G     + +   + QG+ S        + +      V        R   +SD  L 
Sbjct: 565  FIEDGRLVIHSLDY--SDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRL-VLSDLHLL 621

Query: 338  ---KLSIVWLRGSE---PI---DFESEPRFVQSND-YSLTVTKSSELDSG-------QYT 380
               ++ + W    +   PI   D E E + +     YSL     ++  +         YT
Sbjct: 622  TQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYVHYT 681

Query: 381  CRAQTELDFIEAQ---ATLTVQVPLEAPSNFTLI---QVIDAKKAVVSWNPVSPQSLRGH 434
             R      +   +    + TV  P  AP    +    +  +    V++W P+        
Sbjct: 682  FRVTAINKYGPGEPSPVSETVVTPEAAPEKNPMDVKGEGNETTNMVITWKPLRWMDWNAP 741

Query: 435  FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
               Y+VQ W  +   G  +E IV+      +    FVP      +V A N    GP  ++
Sbjct: 742  QVQYRVQ-WRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYE---IKVQAVNSQGKGPEPQV 797

Query: 495  ISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVKGTKV 549
                + E  P  +  LE I  L SSA  +KW  V   Q  G L GY + Y  +  +    
Sbjct: 798  TIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGYNVTYWREGSQRKHS 857

Query: 550  GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF---KNPD 606
               + +   +    TTS  L+GL P + Y + +  +   G G  S++ F  P     +P+
Sbjct: 858  KRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGSGPASEFTFSTPEGVPGHPE 917

Query: 607  NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLA 666
             +     +  +L++ W   P + HN     Y + +  H   E        + R  EL   
Sbjct: 918  ALHLECQSNTSLLLRW--QPPLSHNGVLTGYVLSY--HPLDEGGKGQLSFNLRDPELRTH 973

Query: 667  NQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
            N     P   Y  ++  T  E  GE  +RE
Sbjct: 974  NLTDLSPHLRYRFQLQATTKEGPGEAIVRE 1003



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 161/389 (41%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS----QGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P + +     Q  +  S  I   + 
Sbjct: 38  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSLHSGSFTITGNNS 97

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P      E E+V   C  
Sbjct: 98  NFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPV--EVEEGESVVLPCNP 155

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 156 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 213

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 214 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 273

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++  V   D GEY C A N LG+A+ +  +TV+   +   +
Sbjct: 274 PSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHK 333

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++  ++ +  +    +L ++    
Sbjct: 334 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQP 391

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A+     + A A +  VQ+P
Sbjct: 392 SDTMVTQCEARNRHGLLLANAYIYVVQLP 420


>gi|397466242|ref|XP_003804874.1| PREDICTED: neural cell adhesion molecule L1 [Pan paniscus]
          Length = 1257

 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 197/721 (27%), Positives = 305/721 (42%), Gaps = 80/721 (11%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L +  V   D G Y 
Sbjct: 253 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLKVGEEDDGEYR 311

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 312 CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 370

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 371 IPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 430

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 431 ADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 490

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 491 DTGRYFCLAANDQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPS 550

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 551 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 608

Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
                 VP    S+  L+      +  VSW+P   +        Y ++   ++       
Sbjct: 609 VGSPGPVPRLVLSDLHLLT---QSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWY 663

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTV----- 507
            L    G  T+T + K  P      RV A N    G PS +  + VTPE  P        
Sbjct: 664 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPMDVK 722

Query: 508 -QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
            +  E   +  +   L+W+    P    + Y+++++  +GT+ GP  E++  +SDP    
Sbjct: 723 GEGNETTNMVITWKPLRWMDWNAPQ---VQYRVQWRP-QGTR-GPWQEQI--VSDPFLVV 775

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
           +  +   P   Y I +      G G E +    + +   D  +              A+P
Sbjct: 776 SNTSTFVP---YEIKVQAVNSQGKGPEPQ--VTIGYSGEDYPQ--------------AIP 816

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVL-DWRQSELVLANQPTFQPYEIKVVQTWTE- 684
           E+E                  E  N   VL  WR  +L    +   + Y    V  W E 
Sbjct: 817 ELE----------------GIEILNSSAVLVKWRPVDLAQV-KGHLRGYN---VTYWREG 856

Query: 685 ---KDGEGSI-RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 740
              K  +  I ++ +V    +T+  +    P S     V AFNG  +GP SE  +F TPE
Sbjct: 857 SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGSGPTSE-FTFSTPE 915

Query: 741 G 741
           G
Sbjct: 916 G 916



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 165/690 (23%), Positives = 264/690 (38%), Gaps = 82/690 (11%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI +G    +LI+ +V+ SD     CE  
Sbjct: 352  LDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRG----ALILSNVQPSDTMVTQCEAR 407

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + +   A +  T    CKA G P P + W+  +G 
Sbjct: 408  NRHGLLLANAY-IYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGT 466

Query: 165  PISQAP---PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q     P     +G     I +L+ +DTG Y C A N    V   +  N+ +  A +
Sbjct: 467  TVLQDERFFPYANGTLG-----IRDLQANDTGRYFCLAANDQNNV--TIVANLKVKDATQ 519

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWIHNQKELTGGRYTILETGDLKITDVA 278
            IT+ P+      G  V  TC+    P  +P + W  + ++L        E GD   +D  
Sbjct: 520  ITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITWRGDGRDLQ-------ELGD---SDKY 569

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL- 337
            F + G     + +   + QG+ S        + +      V        R   +SD  L 
Sbjct: 570  FIEDGRLVIHSLDY--SDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRL-VLSDLHLL 626

Query: 338  ---KLSIVWLRGSE---PI---DFESEPRFVQSND-YSLTVTKSSELDSG-------QYT 380
               ++ + W    +   PI   D E E + +     YSL     ++  +         YT
Sbjct: 627  TQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYVHYT 686

Query: 381  CRAQTELDFIEAQ---ATLTVQVPLEAPSNFTLI---QVIDAKKAVVSWNPVSPQSLRGH 434
             R      +   +    + TV  P  AP    +    +  +    V++W P+        
Sbjct: 687  FRVTAINKYGPGEPSPVSETVVTPEAAPEKNPMDVKGEGNETTNMVITWKPLRWMDWNAP 746

Query: 435  FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
               Y+VQ W  +   G  +E IV+      +    FVP      +V A N    GP  ++
Sbjct: 747  QVQYRVQ-WRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYE---IKVQAVNSQGKGPEPQV 802

Query: 495  ISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVKGTKV 549
                + E  P  +  LE I  L SSA  +KW  V   Q  G L GY + Y  +  +    
Sbjct: 803  TIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGYNVTYWREGSQRKHS 862

Query: 550  GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVE 609
               + +   +    TTS  L+GL P + Y + +  +   G G  S++ F  P   P + E
Sbjct: 863  KRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGSGPTSEFTFSTPEGVPGHPE 922

Query: 610  G---RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLA 666
                   +  +L++ W   P + HN     Y + +  H   E        + R  EL   
Sbjct: 923  ALHLECQSNTSLLLRW--QPPLSHNGVLTGYVLSY--HPLDEGGKGQLSFNLRDPELRTH 978

Query: 667  NQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
            N     P   Y  ++  T  E  GE  +RE
Sbjct: 979  NLTDLSPHLRYRFQLQATTKEGPGEAIVRE 1008



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 161/389 (41%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS----QGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P + +     Q  +  S  I   + 
Sbjct: 43  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSFTITGNNS 102

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P      E E+V   C  
Sbjct: 103 NFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPV--EVEEGESVVLPCNP 160

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 161 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 218

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 219 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 278

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++  V   D GEY C A N LG+A+ +  +TV+   +   +
Sbjct: 279 PSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHK 338

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++  ++ +  +    +L ++    
Sbjct: 339 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQP 396

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A+     + A A +  VQ+P
Sbjct: 397 SDTMVTQCEARNRHGLLLANAYIYVVQLP 425



 Score = 45.4 bits (106), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 126/320 (39%), Gaps = 60/320 (18%)

Query: 122 VLAAPYFTVE-PEFINAAEEETVTFECKASGLPEPEIHWVHNG---KP-------ISQAP 170
           V+  P  T + P  +     + ++ +C+ASG PE +  W  +G   KP       + Q+P
Sbjct: 31  VMEPPVITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSP 90

Query: 171 PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEAPKDEY 229
            +    +  N     N  +   G Y C A+N LG         +   AP+   E  K   
Sbjct: 91  HSGSFTITGNN---SNFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVE 147

Query: 230 TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL---TGGRYTILETGDLKITDVAFADS-GEY 285
             +G++VVL C    + +P   +  N K L      R T+ + G+L   +V  +D+  +Y
Sbjct: 148 VEEGESVVLPCNPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDY 207

Query: 286 TCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA------------------------ 321
            C        A   G+ T+     I  +P D  V+A                        
Sbjct: 208 ICH-------AHFPGTRTI-----IQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVAL 255

Query: 322 -GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
            GQ     C A   P+   +I WLR S P+   ++    Q+++ +L + K  E D G+Y 
Sbjct: 256 QGQPLVLECIAEGFPT--PTIKWLRPSGPM--PADRVTYQNHNKTLQLLKVGEEDDGEYR 311

Query: 381 CRAQTELDFIEAQATLTVQV 400
           C A+  L        +TV+ 
Sbjct: 312 CLAENSLGSARHAYYVTVEA 331


>gi|33354079|dbj|BAC81123.1| L1 cell adhesion molecule [Pan troglodytes]
          Length = 1255

 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 197/721 (27%), Positives = 305/721 (42%), Gaps = 80/721 (11%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L +  V   D G Y 
Sbjct: 251 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLKVGEEDDGEYR 309

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 310 CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 368

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 369 IPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 428

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 429 ADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 488

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 489 DTGRYFCLAANDQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPS 548

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 549 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 606

Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
                 VP    S+  L+      +  VSW+P   +        Y ++   ++       
Sbjct: 607 VGSPGPVPRLVLSDLHLLT---QSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWY 661

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTV----- 507
            L    G  T+T + K  P      RV A N    G PS +  + VTPE  P        
Sbjct: 662 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPMDVK 720

Query: 508 -QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
            +  E   +  +   L+W+    P    + Y+++++  +GT+ GP  E++  +SDP    
Sbjct: 721 GEGNETTNMVITWKPLRWMDWNAPQ---VQYRVQWRP-QGTR-GPWQEQI--VSDPFLVV 773

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
           +  +   P   Y I +      G G E +    + +   D  +              A+P
Sbjct: 774 SNTSTFVP---YEIKVQAVNSQGKGPEPQ--VTIGYSGEDYPQ--------------AIP 814

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVL-DWRQSELVLANQPTFQPYEIKVVQTWTE- 684
           E+E                  E  N   VL  WR  +L    +   + Y    V  W E 
Sbjct: 815 ELE----------------GIEILNSSAVLVKWRPVDLAQV-KGHLRGYN---VTYWREG 854

Query: 685 ---KDGEGSI-RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 740
              K  +  I ++ +V    +T+  +    P S     V AFNG  +GP SE  +F TPE
Sbjct: 855 SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGSGPASE-FTFSTPE 913

Query: 741 G 741
           G
Sbjct: 914 G 914



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 164/690 (23%), Positives = 265/690 (38%), Gaps = 82/690 (11%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI +G    +LI+ +V+ SD     CE  
Sbjct: 350  LDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRG----ALILSNVQPSDTMVTQCEAR 405

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + +   A +  T    CKA G P P + W+  +G 
Sbjct: 406  NRHGLLLANAY-IYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGT 464

Query: 165  PISQAP---PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q     P     +G     I +L+ +DTG Y C A N    V   +  N+ +  A +
Sbjct: 465  TVLQDERFFPYANGTLG-----IRDLQANDTGRYFCLAANDQNNV--TIVANLKVKDATQ 517

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWIHNQKELTGGRYTILETGDLKITDVA 278
            IT+ P+      G  V  TC+    P  +P + W  + ++L        E GD   +D  
Sbjct: 518  ITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITWRGDGRDLQ-------ELGD---SDKY 567

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL- 337
            F + G     + +   + QG+ S        + +      V        R   +SD  L 
Sbjct: 568  FIEDGRLVIHSLDY--SDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRL-VLSDLHLL 624

Query: 338  ---KLSIVWLRGSE---PI---DFESEPRFVQSND-YSLTVTKSSELDSG-------QYT 380
               ++ + W    +   PI   D E E + +     YSL     ++  +         YT
Sbjct: 625  TQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYVHYT 684

Query: 381  CRAQTELDFIEAQ---ATLTVQVPLEAPSNFTLI---QVIDAKKAVVSWNPVSPQSLRGH 434
             R      +   +    + TV  P  AP    +    +  +    V++W P+        
Sbjct: 685  FRVTAINKYGPGEPSPVSETVVTPEAAPEKNPMDVKGEGNETTNMVITWKPLRWMDWNAP 744

Query: 435  FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
               Y+VQ W  +   G  +E IV+      +    FVP      +V A N    GP  ++
Sbjct: 745  QVQYRVQ-WRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYE---IKVQAVNSQGKGPEPQV 800

Query: 495  ISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVKGTKV 549
                + E  P  +  LE I  L SSA  +KW  V   Q  G L GY + Y  +  +    
Sbjct: 801  TIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGYNVTYWREGSQRKHS 860

Query: 550  GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF---KNPD 606
               + +   +    TTS  L+GL P + Y + +  +   G G  S++ F  P     +P+
Sbjct: 861  KRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGSGPASEFTFSTPEGVPGHPE 920

Query: 607  NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLA 666
             +     +  +L++ W   P + HN     Y + +  H   E        + R  EL   
Sbjct: 921  ALHLECQSNTSLLLRW--QPPLSHNGVLTGYVLSY--HPLDEGGKGQLSFNLRDPELRTH 976

Query: 667  NQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
            N     P   Y  ++  T  E  GE  +RE
Sbjct: 977  NLTDLSPHLRYRFQLQATTKEGPGEAIVRE 1006



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 161/389 (41%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS----QGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P + +     Q  +  S  I   + 
Sbjct: 41  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSFTITGNNS 100

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P      E E+V   C  
Sbjct: 101 NFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPV--EVEEGESVVLPCNP 158

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 159 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 216

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 217 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 276

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++  V   D GEY C A N LG+A+ +  +TV+   +   +
Sbjct: 277 PSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHK 336

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++  ++ +  +    +L ++    
Sbjct: 337 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQP 394

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A+     + A A +  VQ+P
Sbjct: 395 SDTMVTQCEARNRHGLLLANAYIYVVQLP 423



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 126/320 (39%), Gaps = 60/320 (18%)

Query: 122 VLAAPYFTVE-PEFINAAEEETVTFECKASGLPEPEIHWVHNG---KP-------ISQAP 170
           V+  P  T + P  +     + ++ +C+ASG PE +  W  +G   KP       + Q+P
Sbjct: 29  VMEPPVITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSP 88

Query: 171 PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEAPKDEY 229
            +    +  N     N  +   G Y C A+N LG         +   AP+   E  K   
Sbjct: 89  HSGSFTITGNN---SNFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVE 145

Query: 230 TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL---TGGRYTILETGDLKITDVAFADS-GEY 285
             +G++VVL C    + +P   +  N K L      R T+ + G+L   +V  +D+  +Y
Sbjct: 146 VEEGESVVLPCNPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDY 205

Query: 286 TCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA------------------------ 321
            C        A   G+ T+     I  +P D  V+A                        
Sbjct: 206 ICH-------AHFPGTRTI-----IQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVAL 253

Query: 322 -GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
            GQ     C A   P+   +I WLR S P+   ++    Q+++ +L + K  E D G+Y 
Sbjct: 254 QGQPLVLECIAEGFPT--PTIKWLRPSGPM--PADRVTYQNHNKTLQLLKVGEEDDGEYR 309

Query: 381 CRAQTELDFIEAQATLTVQV 400
           C A+  L        +TV+ 
Sbjct: 310 CLAENSLGSARHAYYVTVEA 329


>gi|339238857|ref|XP_003380983.1| putative fibronectin type III domain protein [Trichinella spiralis]
 gi|316976074|gb|EFV59418.1| putative fibronectin type III domain protein [Trichinella spiralis]
          Length = 1127

 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 137/447 (30%), Positives = 217/447 (48%), Gaps = 44/447 (9%)

Query: 8   EYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALR-NKKVELFCIFGGTPLPQTI 66
           EY+ G+   L V     S ++ + A  ++  T    + L+    + L CIF G PLP   
Sbjct: 154 EYRAGDEFRLLV-----SPTEKKTASIKKLWTSPTNIVLQAGNDLHLTCIFSGRPLPSIH 208

Query: 67  WSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAP 126
           WSK    + P++RI+  N+GK+LIIK V  SD+G+Y C+ +NG+     + + + +L AP
Sbjct: 209 WSKKDAQL-PTNRIAHKNFGKTLIIKSVISSDKGTYICD-ANGLVR---HEMHVEILNAP 263

Query: 127 -YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR--IT 183
            +    P  +N AEE      CK  G P+P + W  NG+PI+    N RR +  N   + 
Sbjct: 264 QWVDGPPADLNVAEESNAELHCKVFGDPQPIVRWFINGQPITDFSENSRRLLSSNGEILK 323

Query: 184 IENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY--TVDGKTVVLTC 240
           I NL    DT  Y CNA+N LGY++ + ++NV AHAP  T   +DE   T+ G+ V L C
Sbjct: 324 IVNLNHDVDTAVYQCNASNPLGYIFANAFINVYAHAPRFT-TEEDEIVPTILGQDVDLDC 382

Query: 241 RVFGAPKPEVNWIHN-QKELTGGR--YTILETGDLKITDVAFADSGEYTCFARNKLGTAQ 297
            V  APKPEV W+ N ++E+   R  + IL    L+I+ V   D+G Y C   NK G  +
Sbjct: 383 SVEAAPKPEVKWMDNKEREIKDSRPRFHILSNHTLRISAVTAKDAGLYFCHVNNKYGLNR 442

Query: 298 GSGSLTVKEHTH---------------------ITDQPEDYEVEAGQSATFRCNAVSDPS 336
               L V                          +  +P    ++A       C A +D  
Sbjct: 443 AKRKLEVYSMFQPFPTFHKFKAILSLIEATQFLVELKPAKAIIDANSKFNLFCEAKADDR 502

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
           L++  +W R    ++  S+  +       L + K     SG YTC ++T++D ++++  L
Sbjct: 503 LEIEYLWYRDQILLNNASDNAYRIDIPNKLEIVKPRGRHSGIYTCVSKTKVDTLKSKMQL 562

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW 423
            V+   E+P   ++    + ++A+V W
Sbjct: 563 IVKDVPESPKLLSID--CNERRALVRW 587



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 135/570 (23%), Positives = 233/570 (40%), Gaps = 64/570 (11%)

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPN--PRRKVGPNRITIENLRKSDTGNYGCNATNSLG 204
           C  SG P P IHW    K  +Q P N    +  G   I I+++  SD G Y C+A    G
Sbjct: 197 CIFSGRPLPSIHW---SKKDAQLPTNRIAHKNFGKTLI-IKSVISSDKGTYICDAN---G 249

Query: 205 YVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQKELT--- 260
            V  +++V +L +AP+  + P  +  V +     L C+VFG P+P V W  N + +T   
Sbjct: 250 LVRHEMHVEIL-NAPQWVDGPPADLNVAEESNAELHCKVFGDPQPIVRWFINGQPITDFS 308

Query: 261 -GGRYTILETGD-LKITDVAF-ADSGEYTCFARNKLGTAQGSGSLTVKEHT--HITDQPE 315
              R  +   G+ LKI ++    D+  Y C A N LG    +  + V  H     T++ E
Sbjct: 309 ENSRRLLSSNGEILKIVNLNHDVDTAVYQCNASNPLGYIFANAFINVYAHAPRFTTEEDE 368

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
                 GQ     C+  + P  K  + W+   E    +S PRF   ++++L ++  +  D
Sbjct: 369 IVPTILGQDVDLDCSVEAAP--KPEVKWMDNKEREIKDSRPRFHILSNHTLRISAVTAKD 426

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNF----TLIQVIDAKKAVVSWNP----VS 427
           +G Y C    +     A+  L V    +    F     ++ +I+A + +V   P    + 
Sbjct: 427 AGLYFCHVNNKYGLNRAKRKLEVYSMFQPFPTFHKFKAILSLIEATQFLVELKPAKAIID 486

Query: 428 PQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
             S    F   K     E +      ++++N        +D  +P   N   ++   G +
Sbjct: 487 ANSKFNLFCEAKADDRLEIEYLWYRDQILLNNASDNAYRID--IP---NKLEIVKPRGRH 541

Query: 488 NGPPSEIISFVTPEGVPGTVQ----------SLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
           +G  +  +S    + +   +Q           L +I        ++W      +  +  Y
Sbjct: 542 SGIYT-CVSKTKVDTLKSKMQLIVKDVPESPKLLSIDCNERRALVRWAAAYDNHEPITKY 600

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTT---TSAKLAGLEPSTKYRIHLAGYTKAGDG--- 591
            ++Y++     V      +P +++  T   T   +  L P   Y   +    K G G   
Sbjct: 601 TVEYETAFHKNVW-----IPALTEEQTDQKTFEAVINLSPWVNYTFRVIASNKRGAGTPG 655

Query: 592 ---AESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
              A  +     P+ NP NV   G+  +NL      M + E N   F+Y I +R    G 
Sbjct: 656 YLKATCQTPPSYPYTNPKNVSAAGTEKDNL-----PMSKEECNGERFRYLIRYRLDEPGT 710

Query: 649 AWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           +W + +V D  Q  +V+ +QPTF+ Y ++V
Sbjct: 711 SWEEFEVEDPLQDHVVIRDQPTFRKYVVQV 740



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 8/198 (4%)

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRE---LI 456
           +P+ AP N  + +VI++   V+ W+ V P S+RGHF GYK+  W   D    + +   + 
Sbjct: 764 IPVAAPENVKVTEVINSTSIVLEWDHVDPDSVRGHFYGYKILCWLVNDAGKRVTDKPKVT 823

Query: 457 VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLG 516
           +      T  +    P S     VLA+N  ++GP S  I   TPEG P  V++L A  LG
Sbjct: 824 LAPPTERTAVLKDLQPMSTYQTAVLAYNSMHDGPTSSWIYITTPEGTPSAVRNLHAKALG 883

Query: 517 SSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPST 576
           ++     W  PE   G L GY I ++     +       +PY      +       +P+T
Sbjct: 884 ANTILTSWDAPETARGRLRGYYIAFKGTTEQEKE-EETWVPY----PRSFYLYETAKPAT 938

Query: 577 KYRIHLAGYTKAGDGAES 594
           +Y I +   T  G+G ++
Sbjct: 939 RYEISIWAETGGGEGEKA 956



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 138/341 (40%), Gaps = 41/341 (12%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFE 146
           S+   H +  DQG Y C VSN  G A S+  ++      YF   P + +   E + +T E
Sbjct: 26  SITFLHPQVDDQGYYQCSVSNIYGVAMSHIFEVKTGVLNYFDRRPVKDVIVEEGQPLTLE 85

Query: 147 C-KASGLPEPEIHWVHNGKPISQAPPNPRRKV----GPNRITIENLRKSDTGN---YGCN 198
           C K  G+P P I W++     S A     R+     G   +    ++ SD+     Y C 
Sbjct: 86  CNKPYGVPSPTIFWLYRDLKKSYAMDTIHREHITIDGDGNLQFSFVKSSDSDEYRIYQCA 145

Query: 199 ATNSL---GYVYKDVYVNVLAHAPEITEAPKDEYTV-------DGKTVVLTCRVFGAPKP 248
           AT+ +    Y   D +  +++   + T + K  +T         G  + LTC   G P P
Sbjct: 146 ATSPVLHDEYRAGDEFRLLVSPTEKKTASIKKLWTSPTNIVLQAGNDLHLTCIFSGRPLP 205

Query: 249 EVNWIHNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEH 307
            ++W     +L   R      G  L I  V  +D G Y C A         +G +  + H
Sbjct: 206 SIHWSKKDAQLPTNRIAHKNFGKTLIIKSVISSDKGTYICDA---------NGLVRHEMH 256

Query: 308 THITDQPE-------DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPI-DF-ESEPRF 358
             I + P+       D  V    +A   C    DP  +  + W    +PI DF E+  R 
Sbjct: 257 VEILNAPQWVDGPPADLNVAEESNAELHCKVFGDP--QPIVRWFINGQPITDFSENSRRL 314

Query: 359 VQSNDYSLTVTK-SSELDSGQYTCRAQTELDFIEAQATLTV 398
           + SN   L +   + ++D+  Y C A   L +I A A + V
Sbjct: 315 LSSNGEILKIVNLNHDVDTAVYQCNASNPLGYIFANAFINV 355



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 143/639 (22%), Positives = 232/639 (36%), Gaps = 93/639 (14%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINP----SDRISQGNYGKSLIIKHVEFS-DQGSYTCEV 106
           EL C   G P P   W  +G PI      S R+   N G+ L I ++    D   Y C  
Sbjct: 282 ELHCKVFGDPQPIVRWFINGQPITDFSENSRRLLSSN-GEILKIVNLNHDVDTAVYQCNA 340

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           SN +G   + +       AP FT E  E +     + V  +C     P+PE+ W+ N K 
Sbjct: 341 SNPLGYIFANAFINVYAHAPRFTTEEDEIVPTILGQDVDLDCSVEAAPKPEVKWMDN-KE 399

Query: 166 ISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY--------VYK-------- 208
                  PR  +  N  + I  +   D G Y C+  N  G         VY         
Sbjct: 400 REIKDSRPRFHILSNHTLRISAVTAKDAGLYFCHVNNKYGLNRAKRKLEVYSMFQPFPTF 459

Query: 209 ---DVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVN--WIHNQKELTGG 262
                 ++++     + E    +  +D  +   L C      + E+   W  +Q  L   
Sbjct: 460 HKFKAILSLIEATQFLVELKPAKAIIDANSKFNLFCEAKADDRLEIEYLWYRDQILLNNA 519

Query: 263 R---YTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEV 319
               Y I     L+I       SG YTC ++ K+ T +    L VK+   + + P+   +
Sbjct: 520 SDNAYRIDIPNKLEIVKPRGRHSGIYTCVSKTKVDTLKSKMQLIVKD---VPESPKLLSI 576

Query: 320 EAGQS-ATFRCNAVSD---PSLKLSI---------VWL-----RGSEPIDFESEPRFVQS 361
           +  +  A  R  A  D   P  K ++         VW+       ++   FE+       
Sbjct: 577 DCNERRALVRWAAAYDNHEPITKYTVEYETAFHKNVWIPALTEEQTDQKTFEAVINLSPW 636

Query: 362 NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
            +Y+  V  S++  +G           +++A        P   P N      + A     
Sbjct: 637 VNYTFRVIASNKRGAGT--------PGYLKATCQTPPSYPYTNPKN------VSAAGTEK 682

Query: 422 SWNPVSPQSLRGHFRGYKVQ--------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPA 473
              P+S +   G    Y ++        +W E + E  +++ +V + + T  +    V A
Sbjct: 683 DNLPMSKEECNGERFRYLIRYRLDEPGTSWEEFEVEDPLQDHVVIRDQPTFRKYVVQVQA 742

Query: 474 SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPN 531
                R L     Y G   + I    PE V  T    E I   S++  L+W  V P+   
Sbjct: 743 VNAIGRSLMTPEMYIGYSGQDIPVAAPENVKVT----EVI--NSTSIVLEWDHVDPDSVR 796

Query: 532 GVLMGYKIKYQSVKGTKVGPLLERLPYIS--DPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           G   GYKI    V     G  +   P ++   PT  +A L  L+P + Y+  +  Y    
Sbjct: 797 GHFYGYKILCWLVNDA--GKRVTDKPKVTLAPPTERTAVLKDLQPMSTYQTAVLAYNSMH 854

Query: 590 DGAESKYLFY-VPFKNPD---NVEGRGSTPNNLVISWTA 624
           DG  S +++   P   P    N+  +    N ++ SW A
Sbjct: 855 DGPTSSWIYITTPEGTPSAVRNLHAKALGANTILTSWDA 893


>gi|145652526|gb|ABP88252.1| non-neural L1CAM [Homo sapiens]
          Length = 1248

 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 197/721 (27%), Positives = 304/721 (42%), Gaps = 80/721 (11%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR +  N+ K+L +  V   D G Y 
Sbjct: 248 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRATYQNHNKTLQLLKVGEEDDGEYR 306

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 307 CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 365

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 366 IPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 425

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 426 ADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 485

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L V + T IT  P     + G   TF C A  DPSL+ S
Sbjct: 486 DTGRYFCLAANDQNNVTIMANLKVTDATQITQGPRSTIEKKGSRVTFTCQASFDPSLQPS 545

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 546 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 603

Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
                 VP    S+  L+      +  VSW+P    +       Y ++   ++   G   
Sbjct: 604 VGSPGPVPRLVLSDLHLLT---QSQVRVSWSPAEDHN--APIEKYDIEFEDKEMAPGKWY 658

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTV----- 507
            L    G  T+T + K  P      RV A N    G PS +  + VTPE  P        
Sbjct: 659 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVK 717

Query: 508 -QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
            +  E   +  +   L+W+    P    + Y+++++  +GT+ GP  E++  +SDP    
Sbjct: 718 GEGNETTNMVITWKPLRWMDWNAPQ---VQYRVQWRP-QGTR-GPWQEQI--VSDPFLVV 770

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
           +  +   P   Y I +      G G E +    + +   D  +              A+P
Sbjct: 771 SNTSTFVP---YEIKVQAVNSQGKGPEPQ--VTIGYSGEDYPQ--------------AIP 811

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVL-DWRQSELVLANQPTFQPYEIKVVQTWTE- 684
           E+E                  E  N   VL  WR  +L    +   + Y    V  W E 
Sbjct: 812 ELEGI----------------EILNSSAVLVKWRPVDLAQV-KGHLRGYN---VTYWREG 851

Query: 685 ---KDGEGSI-RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 740
              K  +  I ++ +V    +T+  +    P S     V AFNG  +GP SE  +F TPE
Sbjct: 852 SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGSGPASE-FTFSTPE 910

Query: 741 G 741
           G
Sbjct: 911 G 911



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 152/586 (25%), Positives = 235/586 (40%), Gaps = 58/586 (9%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIW-SKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           +A++     L C   G P+P   W  +DG  +   +R      G +L I+ ++ +D G Y
Sbjct: 432 MAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANG-TLGIRDLQANDTGRY 490

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP--EPEIHWV 160
            C  +N      +   +L V  A   T  P      +   VTF C+AS  P  +P I W 
Sbjct: 491 FCLAANDQNNV-TIMANLKVTDATQITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITWR 549

Query: 161 HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAH-AP 219
            +G+ + +   + +  +   R+ I +L  SD GNY C A+  L  V     + V+    P
Sbjct: 550 GDGRDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGP 609

Query: 220 EITEAPKDEYTVDGKTVVLT---CRVFGAPKPEVNWIHNQKELTGGRYTILET--GDLKI 274
                  D + +    V ++        AP  + +     KE+  G++  L    G+   
Sbjct: 610 VPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPGKWYSLGKVPGNQTS 669

Query: 275 TDVAFADSGEYT--CFARNKLGTAQGS--GSLTVKEHTHITDQPEDYEVEAGQSAT---- 326
           T +  +    YT    A NK G  + S      V         P D + E  ++      
Sbjct: 670 TTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVIT 729

Query: 327 ---FRCNAVSDPSLKLSIVW----LRGSEPIDFESEPRFVQSND-----YSLTVTKSSEL 374
               R    + P ++  + W     RG       S+P  V SN      Y + V   +  
Sbjct: 730 WKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYEIKVQAVNSQ 789

Query: 375 DSG---QYTCRAQTELDFIEAQATLTVQVP-LEAPSNFTLIQVIDAKKAVVSWNPVSPQS 430
             G   Q T     E D+ +A       +P LE       I+++++   +V W PV    
Sbjct: 790 GKGPEPQVTIGYSGE-DYPQA-------IPELEG------IEILNSSAVLVKWRPVDLAQ 835

Query: 431 LRGHFRGYKVQTWTE----KDGEGSI-RELIVNKGESTTTEVDKFVPASKNFARVLAFNG 485
           ++GH RGY V  W E    K  +  I ++ +V    +T+  +    P S     V AFNG
Sbjct: 836 VKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNG 895

Query: 486 AYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVK 545
             +GP SE  +F TPEGVPG  ++L      +++  L+W  P   NGVL GY + Y  + 
Sbjct: 896 RGSGPASEF-TFSTPEGVPGHPEALHLECQSNTSLLLRWQPPLSHNGVLTGYVLSYHPLD 954

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
               G L   L    DP   +  L  L P  +YR  L   TK G G
Sbjct: 955 EGGKGQLSFNL---RDPELRTHNLTDLSPHLRYRFQLQATTKEGPG 997



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 166/694 (23%), Positives = 265/694 (38%), Gaps = 90/694 (12%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI +G    +LI+ +V+ SD     CE  
Sbjct: 347  LDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRG----ALILSNVQPSDTMVTQCEAR 402

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + +   A +  T    CKA G P P + W+  +G 
Sbjct: 403  NRHGLLLANAY-IYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGT 461

Query: 165  PISQAP---PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q     P     +G     I +L+ +DTG Y C A N    V   +  N+ +  A +
Sbjct: 462  TVLQDERFFPYANGTLG-----IRDLQANDTGRYFCLAANDQNNV--TIMANLKVTDATQ 514

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWIHNQKELTGGRYTILETGDLKITDVA 278
            IT+ P+      G  V  TC+    P  +P + W  + ++L        E GD   +D  
Sbjct: 515  ITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDGRDLQ-------ELGD---SDKY 564

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL- 337
            F + G     + +   + QG+ S        + +      V        R   +SD  L 
Sbjct: 565  FIEDGRLVIHSLDY--SDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRL-VLSDLHLL 621

Query: 338  ---KLSIVWLRGSE---PI---DFESEPRFVQSND-YSLTVTKSSELDSG-------QYT 380
               ++ + W    +   PI   D E E + +     YSL     ++  +         YT
Sbjct: 622  TQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPGKWYSLGKVPGNQTSTTLKLSPYVHYT 681

Query: 381  CRAQTELDFIEAQ---ATLTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSPQS 430
             R      +   +    + TV  P  AP        +D K         V++W P+    
Sbjct: 682  FRVTAINKYGPGEPSPVSETVVTPEAAPEK----NPVDVKGEGNETTNMVITWKPLRWMD 737

Query: 431  LRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGP 490
                   Y+VQ W  +   G  +E IV+      +    FVP      +V A N    GP
Sbjct: 738  WNAPQVQYRVQ-WRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYE---IKVQAVNSQGKGP 793

Query: 491  PSEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVK 545
              ++    + E  P  +  LE I  L SSA  +KW  V   Q  G L GY + Y  +  +
Sbjct: 794  EPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGYNVTYWREGSQ 853

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF--- 602
                   + +   +    TTS  L+GL P + Y + +  +   G G  S++ F  P    
Sbjct: 854  RKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGSGPASEFTFSTPEGVP 913

Query: 603  KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
             +P+ +     +  +L++ W   P + HN     Y + +  H   E        + R  E
Sbjct: 914  GHPEALHLECQSNTSLLLRW--QPPLSHNGVLTGYVLSY--HPLDEGGKGQLSFNLRDPE 969

Query: 663  LVLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
            L   N     P   Y  ++  T  E  GE  +RE
Sbjct: 970  LRTHNLTDLSPHLRYRFQLQATTKEGPGEAIVRE 1003



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 161/389 (41%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS----QGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P + +     Q  +  S  I   + 
Sbjct: 38  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSFTITGNNS 97

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P      E E+V   C  
Sbjct: 98  NFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPV--EVEEGESVVLPCNP 155

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 156 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 213

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 214 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 273

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++  V   D GEY C A N LG+A+ +  +TV+   +   +
Sbjct: 274 PSGPMPADRATYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHK 333

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++  ++ +  +    +L ++    
Sbjct: 334 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQP 391

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A+     + A A +  VQ+P
Sbjct: 392 SDTMVTQCEARNRHGLLLANAYIYVVQLP 420


>gi|63329|emb|CAA68753.1| precontactin (AA -20 to 1071) [Gallus gallus]
          Length = 1091

 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 193/742 (26%), Positives = 311/742 (41%), Gaps = 104/742 (14%)

Query: 26  ASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY 85
           A + +  P    V  K   AL  + V L C   G P+P+  WSK   P+  +  IS    
Sbjct: 225 ADRAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELRWSKYLEPMPATAEISMS-- 282

Query: 86  GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET--- 142
           G  L I ++++ D+G Y CE  N  G+ K +   + V A+P +    E IN  E++    
Sbjct: 283 GAVLKIFNIQYEDEGLYECEAENYKGKDK-HQARVYVQASPEWV---EHINDTEKDIGSD 338

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202
           + + C A+G P P I W+ NG    +             + I+ L   D G Y C A N+
Sbjct: 339 LYWPCVATGKPIPTIRWLKNGVSFRKG-----------ELRIQGLTFEDAGMYQCIAENA 387

Query: 203 LGYVYKDVYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT 260
            G +Y +  + ++A  P  E+    K      G  V++ C+   APKP+ +W    + L 
Sbjct: 388 HGIIYANAELKIVASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTELLV 447

Query: 261 -GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEV 319
            G R  I + G L+I +V   D G YTCFA N  G A  +G L + E T IT  P + +V
Sbjct: 448 NGSRIHIWDDGSLEIINVTKLDEGRYTCFAENNRGKANSTGVLEMTEATRITLAPLNVDV 507

Query: 320 EAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN-----DYSLTVTKSSEL 374
             G++AT +C A  DP+L L+ +W      IDFE E    + N     +  L +      
Sbjct: 508 TVGENATMQCIASHDPTLDLTFIWSLNGFVIDFEKEHEHYERNVMIKSNGELLIKNVQLR 567

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVS 427
            +G+YTC AQT +D   A A L V+ P   P    + ++ D   A ++W       +P+S
Sbjct: 568 HAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGIRIEEIRDTAVA-LTWSRGTDNHSPIS 626

Query: 428 PQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
             +++   + +  + W +   E S  E     G   +  V   +P  +   R++A N   
Sbjct: 627 KYTIQS--KTFLSEEWKDAKTEPSDIE-----GNMESARVIDLIPWMEYEFRIIATNTLG 679

Query: 488 NGPPSEIISFVTPEGVPGTVQSLEAIPLGSS--AFYLKW--VKPEQPNGVLMGYKIKYQS 543
            G PS     +  EG P  V   +    G S     + W  +  E   G   GY + ++ 
Sbjct: 680 TGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNRELTITWMPLSREYHYGNNFGYIVAFKP 739

Query: 544 VKGTKVGPLLERLPYISDPTTTS--AKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFY- 599
                 G    R   +++P       K   + PST+Y++ +  +   GDG  S   + Y 
Sbjct: 740 -----FGEKEWRRVTVTNPEIGRYVHKDESMPPSTQYQVKVKAFNSKGDGPFSLTAVIYS 794

Query: 600 ---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVL 656
               P + P +V  +  + + + +SW                     H+  E        
Sbjct: 795 AQDAPTEVPTDVSVKVLSSSEISVSW---------------------HHVTEK------- 826

Query: 657 DWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 716
                        + + Y+I+    W   D E + + + V+  E  +T+++   P ++  
Sbjct: 827 -------------SVEGYQIRY---WAAHDKEAAAQRVQVSNQE-YSTKLENLKPNTRYH 869

Query: 717 ARVLAFNGAYNGPPSEIISFVT 738
             V AFN A  GPPS  I  +T
Sbjct: 870 IDVSAFNSAGYGPPSRTIDIIT 891



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 141/637 (22%), Positives = 258/637 (40%), Gaps = 92/637 (14%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C+  G P+P   W K+GV     +          L I+ + F D G Y C   N  G   
Sbjct: 343 CVATGKPIPTIRWLKNGVSFRKGE----------LRIQGLTFEDAGMYQCIAENAHGIIY 392

Query: 115 SYSIDLSVLAAP-YFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + + +L ++A+P  F + P  + I AA+   V  ECK    P+P+  W    + +     
Sbjct: 393 A-NAELKIVASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTELLVNGS- 450

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  +  +  + I N+ K D G Y C A N+ G       V  +  A  IT AP +   
Sbjct: 451 --RIHIWDDGSLEIINVTKLDEGRYTCFAENNRGKA-NSTGVLEMTEATRITLAPLNVDV 507

Query: 231 VDGKTVVLTCRVFGAPKPEVNWI----------HNQKELTGGRYTILETGDLKITDVAFA 280
             G+   + C     P  ++ +I            + E       I   G+L I +V   
Sbjct: 508 TVGENATMQCIASHDPTLDLTFIWSLNGFVIDFEKEHEHYERNVMIKSNGELLIKNVQLR 567

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            +G YTC A+  +  +  S  L V+                G     R   + D ++ L+
Sbjct: 568 HAGRYTCTAQTIVDNSSASADLVVRG-------------PPGPPGGIRIEEIRDTAVALT 614

Query: 341 IVWLRGSE---PID-FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ--- 393
             W RG++   PI  +  + +   S ++    T+ S+++    + R    + ++E +   
Sbjct: 615 --WSRGTDNHSPISKYTIQSKTFLSEEWKDAKTEPSDIEGNMESARVIDLIPWMEYEFRI 672

Query: 394 -ATLTV-----QVPLE------APSNFTLIQVIDA----KKAVVSWNPVSPQSLRGHFRG 437
            AT T+      +P +      AP N     V       ++  ++W P+S +   G+  G
Sbjct: 673 IATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNRELTITWMPLSREYHYGNNFG 732

Query: 438 YKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFV-------PASKNFARVLAFNGAYNGP 490
           Y V    +  GE   R + V     T  E+ ++V       P+++   +V AFN   +GP
Sbjct: 733 YIVAF--KPFGEKEWRRVTV-----TNPEIGRYVHKDESMPPSTQYQVKVKAFNSKGDGP 785

Query: 491 PSEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
            S      + +  P  V +  ++  L SS   + W    + +  + GY+I+Y +    + 
Sbjct: 786 FSLTAVIYSAQDAPTEVPTDVSVKVLSSSEISVSWHHVTEKS--VEGYQIRYWAAHDKEA 843

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVE 609
               +R+   +   +T  KL  L+P+T+Y I ++ +  AG G  S+ +  +  K P +  
Sbjct: 844 AA--QRVQVSNQEYST--KLENLKPNTRYHIDVSAFNSAGYGPPSRTIDIITRKAPPSQR 899

Query: 610 GR----GSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
            R      + +  +I+W  +  + + +    Y++ +R
Sbjct: 900 PRIISSVRSGSRYIITWDHVKAMSNESAVEGYKVLYR 936



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 131/322 (40%), Gaps = 41/322 (12%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVL-AAPYFTVEPEFINAA 138
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  A    V P  I   
Sbjct: 181 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPQADRAKVYPADIKVK 238

Query: 139 EEET-------VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSD 191
            ++T       VT EC A G P PE+ W    +P+   P      +    + I N++  D
Sbjct: 239 FKDTYALLGQNVTLECFALGNPVPELRWSKYLEPM---PATAEISMSGAVLKIFNIQYED 295

Query: 192 TGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVN 251
            G Y C A N  G       V V A +PE  E   D     G  +   C   G P P + 
Sbjct: 296 EGLYECEAENYKGKDKHQARVYVQA-SPEWVEHINDTEKDIGSDLYWPCVATGKPIPTIR 354

Query: 252 WIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT 311
           W+ N              G+L+I  + F D+G Y C A N  G    +  L       I 
Sbjct: 355 WLKNG--------VSFRKGELRIQGLTFEDAGMYQCIAENAHGIIYANAEL------KIV 400

Query: 312 DQPEDYEVE---------AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
             P  +E+           G      C   + P  K S  W +G+E +   S  R    +
Sbjct: 401 ASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTELLVNGS--RIHIWD 456

Query: 363 DYSLTVTKSSELDSGQYTCRAQ 384
           D SL +   ++LD G+YTC A+
Sbjct: 457 DGSLEIINVTKLDEGRYTCFAE 478



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 142/382 (37%), Gaps = 46/382 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           +V + C     P P   W  +   I+ + DR S    G  L+I + E S D G Y C VS
Sbjct: 52  QVSMNCRARAVPFPTYKWKLNNWDIDLTKDRYSM--VGGRLVISNPEKSRDAGKYVCVVS 109

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--------W 159
           N  G  +S    LS      F  E  +     E  V     A  L EP  H        W
Sbjct: 110 NIFGTVRSSEATLSFGYLDPFPPEEHY-----EVKVREGVGAVLLCEPPYHYPDDLSYRW 164

Query: 160 VHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           + N  P+  A    R     N  + I N+  SD GNY C  ++    + K V+   +   
Sbjct: 165 LLNEFPVFIALDRRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIPLI 222

Query: 219 PEITEAP----------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE 268
           P+   A           KD Y + G+ V L C   G P PE+ W    + +       + 
Sbjct: 223 PQADRAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELRWSKYLEPMPATAEISMS 282

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
              LKI ++ + D G Y C A N  G  +    + V+      +   D E + G    + 
Sbjct: 283 GAVLKIFNIQYEDEGLYECEAENYKGKDKHQARVYVQASPEWVEHINDTEKDIGSDLYWP 342

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A   P    +I WL+    + F      +Q   +          D+G Y C A+    
Sbjct: 343 CVATGKPI--PTIRWLKNG--VSFRKGELRIQGLTFE---------DAGMYQCIAENAHG 389

Query: 389 FIEAQATLTVQVPLEAPSNFTL 410
            I A A L +   + +P  F L
Sbjct: 390 IIYANAELKI---VASPPTFEL 408



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 110/293 (37%), Gaps = 31/293 (10%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + +  V+  C+A  +P P   W  N   I       R  +   R+ I 
Sbjct: 39  PIDTIYPE---ESSDGQVSMNCRARAVPFPTYKWKLNNWDIDLT--KDRYSMVGGRLVIS 93

Query: 186 NLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV---DGKTVVLTCR 241
           N  KS D G Y C  +N  G V          +       P++ Y V   +G   VL C 
Sbjct: 94  NPEKSRDAGKYVCVVSNIFGTVRSSEATLSFGYLDPF--PPEEHYEVKVREGVGAVLLCE 151

Query: 242 V-FGAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGT 295
             +  P      W+ N+      L   R+     G+L I +V  +D G Y+CF  +   T
Sbjct: 152 PPYHYPDDLSYRWLLNEFPVFIALDRRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSIT 211

Query: 296 AQGSGSLT--VKEHTHITDQPEDYEVE-------AGQSATFRCNAVSDPSLKLSIVWLRG 346
                     + +       P D +V+        GQ+ T  C A+ +P  +L   W + 
Sbjct: 212 KSVFSKFIPLIPQADRAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELR--WSKY 269

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            EP+   +E   +  +   L +      D G Y C A+      + QA + VQ
Sbjct: 270 LEPMPATAE---ISMSGAVLKIFNIQYEDEGLYECEAENYKGKDKHQARVYVQ 319


>gi|326911406|ref|XP_003202050.1| PREDICTED: contactin-1-like [Meleagris gallopavo]
          Length = 1010

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 192/742 (25%), Positives = 312/742 (42%), Gaps = 104/742 (14%)

Query: 26  ASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY 85
           A + +  P    V  K   AL  + V L C   G P+P+  WSK   P+  +  IS    
Sbjct: 225 ADRAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELRWSKYLEPMPATAEISMS-- 282

Query: 86  GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET--- 142
           G  L I ++++ D+G Y CE  N  G+ K +   + V A+P +    E IN  E++    
Sbjct: 283 GAVLKIFNIQYEDEGLYECEAENYKGKDK-HQARVYVQASPEWV---EHINDTEKDIGSD 338

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202
           + + C A+G P P I W+ NG    +             + I++L   D G Y C A N+
Sbjct: 339 LYWPCVATGKPIPTIRWLKNGVSFRKG-----------ELRIQSLTFEDAGMYQCIAENT 387

Query: 203 LGYVYKDVYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT 260
            G +Y +  + ++A  P  E+    K      G  V++ C+   APKP+ +W    + L 
Sbjct: 388 HGIIYANAELKIVASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTELLV 447

Query: 261 -GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEV 319
            G R  I + G L+I +V   D G YTCFA N  G A  +G L + E T IT  P + +V
Sbjct: 448 NGSRIRIWDDGSLEIINVTKLDEGRYTCFAENNRGKANSTGVLEMTEATRITLAPLNVDV 507

Query: 320 EAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN-----DYSLTVTKSSEL 374
             G++AT +C A  DP+L L+ +W      IDFE E    + N     +  L +      
Sbjct: 508 TVGENATMQCIASHDPTLDLTFIWSLNGFVIDFEKEHEHYERNVMIKSNGELLIKNVQLR 567

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVS 427
            +G+YTC AQT +D   A A L V+ P   P    + ++ D   A ++W       +P+S
Sbjct: 568 HAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGIRIEEIRDTAVA-LTWSRGTDNHSPIS 626

Query: 428 PQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
             +++   + +  + W +   E S  E     G   +  V   +P  +   R++A N   
Sbjct: 627 KYTIQS--KTFLSEEWKDAKTEPSDIE-----GNMESARVIDLIPWMEYEFRIIATNTLG 679

Query: 488 NGPPSEIISFVTPEGVPGTVQSLEAIPLGSS--AFYLKW--VKPEQPNGVLMGYKIKYQS 543
            G PS     +  EG P  V   +    G S     + W  +  E   G   GY + ++ 
Sbjct: 680 TGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNRELTITWMPLSREYHYGNNFGYIVAFKP 739

Query: 544 VKGTKVGPLLERLPYISDPTTTS--AKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFY- 599
                 G    R   +++P       K   + PST+Y++ +  +   GDG  S   + Y 
Sbjct: 740 -----FGEKEWRRVTVTNPEIGRYVHKDESMPPSTQYQVKVKAFNNKGDGPFSLTAVIYS 794

Query: 600 ---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVL 656
               P + P +V  +  + + + +SW                     H+  E        
Sbjct: 795 AQDAPTEVPTDVSVKVLSSSEISVSW---------------------HHVTEK------- 826

Query: 657 DWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 716
                        + + Y+I+    W   D E + + + V+  E  +T+++   P ++  
Sbjct: 827 -------------SVEGYQIRY---WAAHDKEAAAQRVQVSNQE-YSTKLENLKPNTRYH 869

Query: 717 ARVLAFNGAYNGPPSEIISFVT 738
             V AFN A  GPPS  +  +T
Sbjct: 870 IDVSAFNSAGYGPPSRTVDIIT 891



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 144/642 (22%), Positives = 258/642 (40%), Gaps = 102/642 (15%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C+  G P+P   W K+GV     +          L I+ + F D G Y C   N  G   
Sbjct: 343 CVATGKPIPTIRWLKNGVSFRKGE----------LRIQSLTFEDAGMYQCIAENTHGIIY 392

Query: 115 SYSIDLSVLAAP-YFTVEP--EFINAAEEETVTFECKASGLPEPEIHW------VHNGKP 165
           + + +L ++A+P  F + P  + I AA+   V  ECK    P+P+  W      + NG  
Sbjct: 393 A-NAELKIVASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTELLVNGSR 451

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           I        R      + I N+ K D G Y C A N+ G       V  +  A  IT AP
Sbjct: 452 I--------RIWDDGSLEIINVTKLDEGRYTCFAENNRGKA-NSTGVLEMTEATRITLAP 502

Query: 226 KDEYTVDGKTVVLTCRVFGAPKPEVNWI----------HNQKELTGGRYTILETGDLKIT 275
            +     G+   + C     P  ++ +I            + E       I   G+L I 
Sbjct: 503 LNVDVTVGENATMQCIASHDPTLDLTFIWSLNGFVIDFEKEHEHYERNVMIKSNGELLIK 562

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           +V    +G YTC A+  +  +  S  L V+                G     R   + D 
Sbjct: 563 NVQLRHAGRYTCTAQTIVDNSSASADLVVRG-------------PPGPPGGIRIEEIRDT 609

Query: 336 SLKLSIVWLRGSE---PID-FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           ++ L+  W RG++   PI  +  + +   S ++    T+ S+++    + R    + ++E
Sbjct: 610 AVALT--WSRGTDNHSPISKYTIQSKTFLSEEWKDAKTEPSDIEGNMESARVIDLIPWME 667

Query: 392 AQ----ATLTV-----QVPLE------APSNFTLIQVIDA----KKAVVSWNPVSPQSLR 432
            +    AT T+      +P +      AP N     V       ++  ++W P+S +   
Sbjct: 668 YEFRIIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNRELTITWMPLSREYHY 727

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFV-------PASKNFARVLAFNG 485
           G+  GY V    +  GE   R + V     T  E+ ++V       P+++   +V AFN 
Sbjct: 728 GNNFGYIVAF--KPFGEKEWRRVTV-----TNPEIGRYVHKDESMPPSTQYQVKVKAFNN 780

Query: 486 AYNGPPSEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
             +GP S      + +  P  V +  ++  L SS   + W    + +  + GY+I+Y + 
Sbjct: 781 KGDGPFSLTAVIYSAQDAPTEVPTDVSVKVLSSSEISVSWHHVTEKS--VEGYQIRYWAA 838

Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKN 604
              +     +R+   +   +T  KL  L+P+T+Y I ++ +  AG G  S+ +  +  K 
Sbjct: 839 HDKEAAA--QRVQVSNQEYST--KLENLKPNTRYHIDVSAFNSAGYGPPSRTVDIITRKA 894

Query: 605 PDNVEGR----GSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           P +   R      + +  +I+W  +  + + +    Y++ +R
Sbjct: 895 PPSQRPRIISSVRSGSRYIITWDHVKAMSNESAVEGYKVLYR 936



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 131/322 (40%), Gaps = 41/322 (12%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVL-AAPYFTVEPEFINAA 138
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  A    V P  I   
Sbjct: 181 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPQADRAKVYPADIKVK 238

Query: 139 EEET-------VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSD 191
            ++T       VT EC A G P PE+ W    +P+   P      +    + I N++  D
Sbjct: 239 FKDTYALLGQNVTLECFALGNPVPELRWSKYLEPM---PATAEISMSGAVLKIFNIQYED 295

Query: 192 TGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVN 251
            G Y C A N  G       V V A +PE  E   D     G  +   C   G P P + 
Sbjct: 296 EGLYECEAENYKGKDKHQARVYVQA-SPEWVEHINDTEKDIGSDLYWPCVATGKPIPTIR 354

Query: 252 WIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT 311
           W+ N              G+L+I  + F D+G Y C A N  G    +  L       I 
Sbjct: 355 WLKNG--------VSFRKGELRIQSLTFEDAGMYQCIAENTHGIIYANAEL------KIV 400

Query: 312 DQPEDYEVE---------AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
             P  +E+           G      C   + P  K S  W +G+E +   S  R    +
Sbjct: 401 ASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTELLVNGSRIRIW--D 456

Query: 363 DYSLTVTKSSELDSGQYTCRAQ 384
           D SL +   ++LD G+YTC A+
Sbjct: 457 DGSLEIINVTKLDEGRYTCFAE 478



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 143/382 (37%), Gaps = 46/382 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           +V + C     P P   W  +   I+ + DR S    G  LII + E S D G Y C VS
Sbjct: 52  QVSMNCRARAVPFPTYKWKLNNWDIDLTKDRYSM--VGGRLIISNPEKSRDAGKYVCIVS 109

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--------W 159
           N  G  +S    LS      F  E  +     E  V     A  L EP  H        W
Sbjct: 110 NIFGTVRSSEATLSFGYLDPFPPEEHY-----EVKVREGVGAVLLCEPPYHYPDDLSYRW 164

Query: 160 VHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           + N  P+  A    R     N  + I N+  SD GNY C  ++    + K V+   +   
Sbjct: 165 LLNEFPVFIALDRRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIPLI 222

Query: 219 PEITEAP----------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE 268
           P+   A           KD Y + G+ V L C   G P PE+ W    + +       + 
Sbjct: 223 PQADRAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELRWSKYLEPMPATAEISMS 282

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
              LKI ++ + D G Y C A N  G  +    + V+      +   D E + G    + 
Sbjct: 283 GAVLKIFNIQYEDEGLYECEAENYKGKDKHQARVYVQASPEWVEHINDTEKDIGSDLYWP 342

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A   P    +I WL+    + F      +QS  +          D+G Y C A+    
Sbjct: 343 CVATGKPI--PTIRWLKNG--VSFRKGELRIQSLTFE---------DAGMYQCIAENTHG 389

Query: 389 FIEAQATLTVQVPLEAPSNFTL 410
            I A A L +   + +P  F L
Sbjct: 390 IIYANAELKI---VASPPTFEL 408



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 110/293 (37%), Gaps = 31/293 (10%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + +  V+  C+A  +P P   W  N   I       R  +   R+ I 
Sbjct: 39  PIDTIYPE---ESSDGQVSMNCRARAVPFPTYKWKLNNWDIDLT--KDRYSMVGGRLIIS 93

Query: 186 NLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV---DGKTVVLTCR 241
           N  KS D G Y C  +N  G V          +       P++ Y V   +G   VL C 
Sbjct: 94  NPEKSRDAGKYVCIVSNIFGTVRSSEATLSFGYLDPF--PPEEHYEVKVREGVGAVLLCE 151

Query: 242 V-FGAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGT 295
             +  P      W+ N+      L   R+     G+L I +V  +D G Y+CF  +   T
Sbjct: 152 PPYHYPDDLSYRWLLNEFPVFIALDRRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSIT 211

Query: 296 AQGSGSLT--VKEHTHITDQPEDYEVE-------AGQSATFRCNAVSDPSLKLSIVWLRG 346
                     + +       P D +V+        GQ+ T  C A+ +P  +L   W + 
Sbjct: 212 KSVFSKFIPLIPQADRAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELR--WSKY 269

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            EP+   +E   +  +   L +      D G Y C A+      + QA + VQ
Sbjct: 270 LEPMPATAE---ISMSGAVLKIFNIQYEDEGLYECEAENYKGKDKHQARVYVQ 319


>gi|292494926|ref|NP_001004381.3| contactin-1 preproprotein [Gallus gallus]
 gi|116917|sp|P14781.1|CNTN1_CHICK RecName: Full=Contactin-1; AltName: Full=Neural cell recognition
           molecule F11; Flags: Precursor
 gi|63385|emb|CAA33018.1| neural cell recognition protein [Gallus gallus]
          Length = 1010

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 193/742 (26%), Positives = 311/742 (41%), Gaps = 104/742 (14%)

Query: 26  ASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY 85
           A + +  P    V  K   AL  + V L C   G P+P+  WSK   P+  +  IS    
Sbjct: 225 ADRAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELRWSKYLEPMPATAEISMS-- 282

Query: 86  GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET--- 142
           G  L I ++++ D+G Y CE  N  G+ K +   + V A+P +    E IN  E++    
Sbjct: 283 GAVLKIFNIQYEDEGLYECEAENYKGKDK-HQARVYVQASPEWV---EHINDTEKDIGSD 338

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202
           + + C A+G P P I W+ NG    +             + I+ L   D G Y C A N+
Sbjct: 339 LYWPCVATGKPIPTIRWLKNGVSFRKG-----------ELRIQGLTFEDAGMYQCIAENA 387

Query: 203 LGYVYKDVYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT 260
            G +Y +  + ++A  P  E+    K      G  V++ C+   APKP+ +W    + L 
Sbjct: 388 HGIIYANAELKIVASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTELLV 447

Query: 261 -GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEV 319
            G R  I + G L+I +V   D G YTCFA N  G A  +G L + E T IT  P + +V
Sbjct: 448 NGSRIHIWDDGSLEIINVTKLDEGRYTCFAENNRGKANSTGVLEMTEATRITLAPLNVDV 507

Query: 320 EAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN-----DYSLTVTKSSEL 374
             G++AT +C A  DP+L L+ +W      IDFE E    + N     +  L +      
Sbjct: 508 TVGENATMQCIASHDPTLDLTFIWSLNGFVIDFEKEHEHYERNVMIKSNGELLIKNVQLR 567

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVS 427
            +G+YTC AQT +D   A A L V+ P   P    + ++ D   A ++W       +P+S
Sbjct: 568 HAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGIRIEEIRDTAVA-LTWSRGTDNHSPIS 626

Query: 428 PQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
             +++   + +  + W +   E S  E     G   +  V   +P  +   R++A N   
Sbjct: 627 KYTIQS--KTFLSEEWKDAKTEPSDIE-----GNMESARVIDLIPWMEYEFRIIATNTLG 679

Query: 488 NGPPSEIISFVTPEGVPGTVQSLEAIPLGSS--AFYLKW--VKPEQPNGVLMGYKIKYQS 543
            G PS     +  EG P  V   +    G S     + W  +  E   G   GY + ++ 
Sbjct: 680 TGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNRELTITWMPLSREYHYGNNFGYIVAFKP 739

Query: 544 VKGTKVGPLLERLPYISDPTTTS--AKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFY- 599
                 G    R   +++P       K   + PST+Y++ +  +   GDG  S   + Y 
Sbjct: 740 -----FGEKEWRRVTVTNPEIGRYVHKDESMPPSTQYQVKVKAFNSKGDGPFSLTAVIYS 794

Query: 600 ---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVL 656
               P + P +V  +  + + + +SW                     H+  E        
Sbjct: 795 AQDAPTEVPTDVSVKVLSSSEISVSW---------------------HHVTEK------- 826

Query: 657 DWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 716
                        + + Y+I+    W   D E + + + V+  E  +T+++   P ++  
Sbjct: 827 -------------SVEGYQIRY---WAAHDKEAAAQRVQVSNQE-YSTKLENLKPNTRYH 869

Query: 717 ARVLAFNGAYNGPPSEIISFVT 738
             V AFN A  GPPS  I  +T
Sbjct: 870 IDVSAFNSAGYGPPSRTIDIIT 891



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 141/637 (22%), Positives = 258/637 (40%), Gaps = 92/637 (14%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C+  G P+P   W K+GV     +          L I+ + F D G Y C   N  G   
Sbjct: 343 CVATGKPIPTIRWLKNGVSFRKGE----------LRIQGLTFEDAGMYQCIAENAHGIIY 392

Query: 115 SYSIDLSVLAAP-YFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + + +L ++A+P  F + P  + I AA+   V  ECK    P+P+  W    + +     
Sbjct: 393 A-NAELKIVASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTELLVNGS- 450

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  +  +  + I N+ K D G Y C A N+ G       V  +  A  IT AP +   
Sbjct: 451 --RIHIWDDGSLEIINVTKLDEGRYTCFAENNRGKA-NSTGVLEMTEATRITLAPLNVDV 507

Query: 231 VDGKTVVLTCRVFGAPKPEVNWI----------HNQKELTGGRYTILETGDLKITDVAFA 280
             G+   + C     P  ++ +I            + E       I   G+L I +V   
Sbjct: 508 TVGENATMQCIASHDPTLDLTFIWSLNGFVIDFEKEHEHYERNVMIKSNGELLIKNVQLR 567

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            +G YTC A+  +  +  S  L V+                G     R   + D ++ L+
Sbjct: 568 HAGRYTCTAQTIVDNSSASADLVVRG-------------PPGPPGGIRIEEIRDTAVALT 614

Query: 341 IVWLRGSE---PID-FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ--- 393
             W RG++   PI  +  + +   S ++    T+ S+++    + R    + ++E +   
Sbjct: 615 --WSRGTDNHSPISKYTIQSKTFLSEEWKDAKTEPSDIEGNMESARVIDLIPWMEYEFRI 672

Query: 394 -ATLTV-----QVPLE------APSNFTLIQVIDA----KKAVVSWNPVSPQSLRGHFRG 437
            AT T+      +P +      AP N     V       ++  ++W P+S +   G+  G
Sbjct: 673 IATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNRELTITWMPLSREYHYGNNFG 732

Query: 438 YKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFV-------PASKNFARVLAFNGAYNGP 490
           Y V    +  GE   R + V     T  E+ ++V       P+++   +V AFN   +GP
Sbjct: 733 YIVAF--KPFGEKEWRRVTV-----TNPEIGRYVHKDESMPPSTQYQVKVKAFNSKGDGP 785

Query: 491 PSEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
            S      + +  P  V +  ++  L SS   + W    + +  + GY+I+Y +    + 
Sbjct: 786 FSLTAVIYSAQDAPTEVPTDVSVKVLSSSEISVSWHHVTEKS--VEGYQIRYWAAHDKEA 843

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVE 609
               +R+   +   +T  KL  L+P+T+Y I ++ +  AG G  S+ +  +  K P +  
Sbjct: 844 AA--QRVQVSNQEYST--KLENLKPNTRYHIDVSAFNSAGYGPPSRTIDIITRKAPPSQR 899

Query: 610 GR----GSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
            R      + +  +I+W  +  + + +    Y++ +R
Sbjct: 900 PRIISSVRSGSRYIITWDHVKAMSNESAVEGYKVLYR 936



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 131/322 (40%), Gaps = 41/322 (12%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVL-AAPYFTVEPEFINAA 138
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  A    V P  I   
Sbjct: 181 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPQADRAKVYPADIKVK 238

Query: 139 EEET-------VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSD 191
            ++T       VT EC A G P PE+ W    +P+   P      +    + I N++  D
Sbjct: 239 FKDTYALLGQNVTLECFALGNPVPELRWSKYLEPM---PATAEISMSGAVLKIFNIQYED 295

Query: 192 TGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVN 251
            G Y C A N  G       V V A +PE  E   D     G  +   C   G P P + 
Sbjct: 296 EGLYECEAENYKGKDKHQARVYVQA-SPEWVEHINDTEKDIGSDLYWPCVATGKPIPTIR 354

Query: 252 WIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT 311
           W+ N              G+L+I  + F D+G Y C A N  G    +  L       I 
Sbjct: 355 WLKNG--------VSFRKGELRIQGLTFEDAGMYQCIAENAHGIIYANAEL------KIV 400

Query: 312 DQPEDYEVE---------AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
             P  +E+           G      C   + P  K S  W +G+E +   S  R    +
Sbjct: 401 ASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTELLVNGS--RIHIWD 456

Query: 363 DYSLTVTKSSELDSGQYTCRAQ 384
           D SL +   ++LD G+YTC A+
Sbjct: 457 DGSLEIINVTKLDEGRYTCFAE 478



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 142/382 (37%), Gaps = 46/382 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           +V + C     P P   W  +   I+ + DR S    G  L+I + E S D G Y C VS
Sbjct: 52  QVSMNCRARAVPFPTYKWKLNNWDIDLTKDRYSM--VGGRLVISNPEKSRDAGKYVCVVS 109

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--------W 159
           N  G  +S    LS      F  E  +     E  V     A  L EP  H        W
Sbjct: 110 NIFGTVRSSEATLSFGYLDPFPPEEHY-----EVKVREGVGAVLLCEPPYHYPDDLSYRW 164

Query: 160 VHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           + N  P+  A    R     N  + I N+  SD GNY C  ++    + K V+   +   
Sbjct: 165 LLNEFPVFIALDRRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIPLI 222

Query: 219 PEITEAP----------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE 268
           P+   A           KD Y + G+ V L C   G P PE+ W    + +       + 
Sbjct: 223 PQADRAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELRWSKYLEPMPATAEISMS 282

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
              LKI ++ + D G Y C A N  G  +    + V+      +   D E + G    + 
Sbjct: 283 GAVLKIFNIQYEDEGLYECEAENYKGKDKHQARVYVQASPEWVEHINDTEKDIGSDLYWP 342

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A   P    +I WL+    + F      +Q   +          D+G Y C A+    
Sbjct: 343 CVATGKPI--PTIRWLKNG--VSFRKGELRIQGLTFE---------DAGMYQCIAENAHG 389

Query: 389 FIEAQATLTVQVPLEAPSNFTL 410
            I A A L +   + +P  F L
Sbjct: 390 IIYANAELKI---VASPPTFEL 408



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 110/293 (37%), Gaps = 31/293 (10%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + +  V+  C+A  +P P   W  N   I       R  +   R+ I 
Sbjct: 39  PIDTIYPE---ESSDGQVSMNCRARAVPFPTYKWKLNNWDIDLT--KDRYSMVGGRLVIS 93

Query: 186 NLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV---DGKTVVLTCR 241
           N  KS D G Y C  +N  G V          +       P++ Y V   +G   VL C 
Sbjct: 94  NPEKSRDAGKYVCVVSNIFGTVRSSEATLSFGYLDPF--PPEEHYEVKVREGVGAVLLCE 151

Query: 242 V-FGAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGT 295
             +  P      W+ N+      L   R+     G+L I +V  +D G Y+CF  +   T
Sbjct: 152 PPYHYPDDLSYRWLLNEFPVFIALDRRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSIT 211

Query: 296 AQGSGSLT--VKEHTHITDQPEDYEVE-------AGQSATFRCNAVSDPSLKLSIVWLRG 346
                     + +       P D +V+        GQ+ T  C A+ +P  +L   W + 
Sbjct: 212 KSVFSKFIPLIPQADRAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELR--WSKY 269

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            EP+   +E   +  +   L +      D G Y C A+      + QA + VQ
Sbjct: 270 LEPMPATAE---ISMSGAVLKIFNIQYEDEGLYECEAENYKGKDKHQARVYVQ 319


>gi|158260531|dbj|BAF82443.1| unnamed protein product [Homo sapiens]
          Length = 1257

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 196/721 (27%), Positives = 304/721 (42%), Gaps = 80/721 (11%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           V L+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L +  V   D G Y 
Sbjct: 253 VTLQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLKVGEEDDGEYR 311

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 312 CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 370

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 371 IPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 430

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 431 ADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 490

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 491 DTGRYFCLAANDQNNVTIMANLKVKDATQITQGPRSTIEKKGSRVTFTCQASFDPSLQPS 550

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 551 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 608

Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
                 VP    S+  L+      +  VSW+P    +       Y ++   ++       
Sbjct: 609 VGSPGPVPRLVLSDLHLLT---QSQVRVSWSPAEDHN--APIEKYDIEFEDKEMAPEKWY 663

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTV----- 507
            L    G  T+T + K  P      RV A N    G PS +  + VTPE  P        
Sbjct: 664 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVK 722

Query: 508 -QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
            +  E   +  +   L+W+    P    + Y+++++  +GT+ GP  E++  +SDP    
Sbjct: 723 GEGNETTNMVITWKPLRWMDWNAPQ---VQYRVQWRP-QGTR-GPWQEQI--VSDPFLVV 775

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
           +  +   P   Y I +      G G E +    + +   D  +              A+P
Sbjct: 776 SNTSTFVP---YEIKVQAVNSQGKGPEPQ--VTIGYSGEDYPQ--------------AIP 816

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVL-DWRQSELVLANQPTFQPYEIKVVQTWTE- 684
           E+E                  E  N   VL  WR  +L    +   + Y    V  W E 
Sbjct: 817 ELE----------------GIEILNSSAVLVKWRPVDLAQV-KGHLRGYN---VTYWREG 856

Query: 685 ---KDGEGSI-RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 740
              K  +  I ++ +V    +T+  +    P S     V AFNG  +GP SE  +F TPE
Sbjct: 857 SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGSGPASE-FTFSTPE 915

Query: 741 G 741
           G
Sbjct: 916 G 916



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 175/696 (25%), Positives = 264/696 (37%), Gaps = 94/696 (13%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI +G    +LI+ +V+ SD     CE  
Sbjct: 352  LDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRG----ALILSNVQPSDTMVTQCEAR 407

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + +   A +  T    CKA G P P + W+  +G 
Sbjct: 408  NRHGLLLANAY-IYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGT 466

Query: 165  PISQAP---PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q     P     +G     I +L+ +DTG Y C A N    V   +  N+ +  A +
Sbjct: 467  TVLQDERFFPYANGTLG-----IRDLQANDTGRYFCLAANDQNNV--TIMANLKVKDATQ 519

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWI---HNQKELTGGRYTILETGDLKIT 275
            IT+ P+      G  V  TC+    P  +P + W     + +EL       +E G L I 
Sbjct: 520  ITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDGRDLQELGDSDKYFIEDGRLVIH 579

Query: 276  DVAFADSGEYTCFARNKLGTAQGSGSLT-----------VKEHTHITDQPEDYEVEAGQS 324
             + ++D G Y+C A  +L   +    L            V    H+  Q +   V    S
Sbjct: 580  SLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQ---VRVSWS 636

Query: 325  ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF------VQSNDYSLTVTKSSELDSGQ 378
                 NA   P  K  I      E  D E  P        V  N  S T+  S  +    
Sbjct: 637  PAEDHNA---PIEKYDI------EFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYV---H 684

Query: 379  YTCRAQTELDFIEAQ---ATLTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSP 428
            YT R      +   +    + TV  P  AP        +D K         V++W P+  
Sbjct: 685  YTFRVTAINKYGPGEPSPVSETVVTPEAAPEK----NPVDVKGEGNETTNMVITWKPLRW 740

Query: 429  QSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
                     Y+VQ W  +   G  +E IV+      +    FVP      +V A N    
Sbjct: 741  MDWNAPQVQYRVQ-WRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYE---IKVQAVNSQGK 796

Query: 489  GPPSEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QS 543
            GP  ++    + E  P  +  LE I  L SSA  +KW  V   Q  G L GY + Y  + 
Sbjct: 797  GPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGYNVTYWREG 856

Query: 544  VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFK 603
             +       + +   +    TTS  L+GL P + Y + +  +   G G  S++ F  P  
Sbjct: 857  SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGSGPASEFTFSTPEG 916

Query: 604  NPDNVEG---RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ 660
             P + E       +  +L++ W   P + HN     Y + +  H   E        + R 
Sbjct: 917  VPGHPEALHLECQSNTSLLLRW--QPPLSHNGVLTGYVLSY--HPLDEGGKGQLSFNLRD 972

Query: 661  SELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
             EL   N     P   Y  ++  T  E  GE  +RE
Sbjct: 973  PELRTHNLTDLSPHLRYRFQLQATTKEGPGEAIVRE 1008



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 162/389 (41%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS----QGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P + +     Q  +  S  I   + 
Sbjct: 43  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSFTITGNNS 102

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P      E E+V   C  
Sbjct: 103 NFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPV--EVEEGESVVLPCNP 160

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 161 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 218

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +         T+ G+ +VL C   G P P + W+ 
Sbjct: 219 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVTLQGQPLVLECIAEGFPTPTIKWLR 278

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++  V   D GEY C A N LG+A+ +  +TV+   +   +
Sbjct: 279 PSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHK 338

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++  ++ +  +    +L ++    
Sbjct: 339 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQP 396

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A+     + A A +  VQ+P
Sbjct: 397 SDTMVTQCEARNRHGLLLANAYIYVVQLP 425



 Score = 45.4 bits (106), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 126/320 (39%), Gaps = 60/320 (18%)

Query: 122 VLAAPYFTVE-PEFINAAEEETVTFECKASGLPEPEIHWVHNG---KP-------ISQAP 170
           V+  P  T + P  +     + ++ +C+ASG PE +  W  +G   KP       + Q+P
Sbjct: 31  VMEPPVITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSP 90

Query: 171 PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEAPKDEY 229
            +    +  N     N  +   G Y C A+N LG         +   AP+   E  K   
Sbjct: 91  HSGSFTITGNN---SNFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVE 147

Query: 230 TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL---TGGRYTILETGDLKITDVAFADS-GEY 285
             +G++VVL C    + +P   +  N K L      R T+ + G+L   +V  +D+  +Y
Sbjct: 148 VEEGESVVLPCNPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDY 207

Query: 286 TCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA------------------------ 321
            C        A   G+ T+     I  +P D  V+A                        
Sbjct: 208 ICH-------AHFPGTRTI-----IQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVTL 255

Query: 322 -GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
            GQ     C A   P+   +I WLR S P+   ++    Q+++ +L + K  E D G+Y 
Sbjct: 256 QGQPLVLECIAEGFPT--PTIKWLRPSGPM--PADRVTYQNHNKTLQLLKVGEEDDGEYR 311

Query: 381 CRAQTELDFIEAQATLTVQV 400
           C A+  L        +TV+ 
Sbjct: 312 CLAENSLGSARHAYYVTVEA 331


>gi|395754608|ref|XP_003779805.1| PREDICTED: neural cell adhesion molecule L1 isoform 2 [Pongo
           abelii]
          Length = 1253

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 196/721 (27%), Positives = 304/721 (42%), Gaps = 80/721 (11%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L +  +   D G Y 
Sbjct: 253 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLKLGEEDDGEYR 311

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 312 CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 370

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 371 IPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 430

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 431 ADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 490

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 491 DTGRYFCLAANDQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPS 550

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 551 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 608

Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
                 VP    S+  L+      +  VSW+P    +       Y ++   ++       
Sbjct: 609 VGSPGPVPRLVLSDLHLLT---QSQVRVSWSPAEDHN--APIEKYDIEFEDKEMAPEKWY 663

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTV----- 507
            L    G  T+T + K  P      RV A N    G PS +  + VTPE  P        
Sbjct: 664 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVK 722

Query: 508 -QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
            +  E   +  +   L+W+    P    + Y+++++  +GT+ GP  E++  +SDP    
Sbjct: 723 GEGNETTNMVITWKPLRWMDWNAPQ---VQYRVQWRP-QGTR-GPWQEQI--VSDPFLMV 775

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
           +  +   P   Y I +      G G E +    + +   D  +              A+P
Sbjct: 776 SNTSTFVP---YEIKVQAVNSQGKGPEPQ--VTIGYSGEDYPQ--------------AIP 816

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVL-DWRQSELVLANQPTFQPYEIKVVQTWTE- 684
           E+E                  E  N   VL  WR  +L    +   + Y    V  W E 
Sbjct: 817 ELE----------------GIEILNSSAVLVKWRPVDLAQV-KGHLRGYN---VTYWREG 856

Query: 685 ---KDGEGSI-RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 740
              K  +  I ++ +V    +T+  +    P S     V AFNG   GP SE  +F TPE
Sbjct: 857 SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGLGPASE-FTFSTPE 915

Query: 741 G 741
           G
Sbjct: 916 G 916



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 174/696 (25%), Positives = 265/696 (38%), Gaps = 94/696 (13%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI +G    +LI+ +V+ SD     CE  
Sbjct: 352  LDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRG----ALILSNVQPSDTMVTQCEAR 407

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + +   A +  T    CKA G P P + W+  +G 
Sbjct: 408  NRHGLLLANAY-IYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGT 466

Query: 165  PISQAP---PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q     P     +G     I +L+ +DTG Y C A N    V   +  N+ +  A +
Sbjct: 467  TVLQDERFFPYANGTLG-----IRDLQANDTGRYFCLAANDQNNV--TIVANLKVKDATQ 519

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWI---HNQKELTGGRYTILETGDLKIT 275
            IT+ P+      G  V  TC+    P  +P + W     + +EL       +E G L I 
Sbjct: 520  ITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITWRGDGRDLQELGDSDKYFIEDGRLVIH 579

Query: 276  DVAFADSGEYTCFARNKLGTAQGSGSLT-----------VKEHTHITDQPEDYEVEAGQS 324
             + ++D G Y+C A  +L   +    L            V    H+  Q +   V    S
Sbjct: 580  SLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQ---VRVSWS 636

Query: 325  ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF------VQSNDYSLTVTKSSELDSGQ 378
                 NA   P  K  I      E  D E  P        V  N  S T+  S  +    
Sbjct: 637  PAEDHNA---PIEKYDI------EFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYV---H 684

Query: 379  YTCRAQTELDFIEAQ---ATLTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSP 428
            YT R      +   +    + TV  P  AP        +D K         V++W P+  
Sbjct: 685  YTFRVTAINKYGPGEPSPVSETVVTPEAAPEK----NPVDVKGEGNETTNMVITWKPLRW 740

Query: 429  QSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
                     Y+VQ W  +   G  +E IV+      +    FVP      +V A N    
Sbjct: 741  MDWNAPQVQYRVQ-WRPQGTRGPWQEQIVSDPFLMVSNTSTFVPYE---IKVQAVNSQGK 796

Query: 489  GPPSEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QS 543
            GP  ++    + E  P  +  LE I  L SSA  +KW  V   Q  G L GY + Y  + 
Sbjct: 797  GPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGYNVTYWREG 856

Query: 544  VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF- 602
             +       + +   +    TTS  L+GL P + Y + +  +   G G  S++ F  P  
Sbjct: 857  SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGLGPASEFTFSTPEG 916

Query: 603  --KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ 660
               +P+ +     +  +L++ W   P + HN     Y + +  H   E        + R 
Sbjct: 917  VPGHPEALHLECQSNTSLLLRW--QPPLSHNGVLTGYVLSY--HPLDEGGKGQLSFNLRD 972

Query: 661  SELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
             EL   N     P   Y  ++  T  E  GE  +RE
Sbjct: 973  PELRTHNLTDLSPHLRYRFQLQATTKEGPGEAIVRE 1008



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 93/389 (23%), Positives = 161/389 (41%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS----QGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P + +     Q  +  S  I   + 
Sbjct: 43  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSFTITGNNS 102

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P      E E+V   C  
Sbjct: 103 NFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPV--EVEEGESVVLPCNP 160

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 161 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 218

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 219 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 278

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++  +   D GEY C A N LG+A+ +  +TV+   +   +
Sbjct: 279 PSGPMPADRVTYQNHNKTLQLLKLGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHK 338

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++  ++ +  +    +L ++    
Sbjct: 339 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQP 396

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A+     + A A +  VQ+P
Sbjct: 397 SDTMVTQCEARNRHGLLLANAYIYVVQLP 425



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 126/320 (39%), Gaps = 60/320 (18%)

Query: 122 VLAAPYFTVE-PEFINAAEEETVTFECKASGLPEPEIHWVHNG---KP-------ISQAP 170
           V+  P  T + P  +     + ++ +C+ASG PE +  W  +G   KP       + Q+P
Sbjct: 31  VMEPPVITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSP 90

Query: 171 PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEAPKDEY 229
            +    +  N     N  +   G Y C A+N LG         +   AP+   E  K   
Sbjct: 91  HSGSFTITGNN---SNFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVE 147

Query: 230 TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL---TGGRYTILETGDLKITDVAFADS-GEY 285
             +G++VVL C    + +P   +  N K L      R T+ + G+L   +V  +D+  +Y
Sbjct: 148 VEEGESVVLPCNPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDY 207

Query: 286 TCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA------------------------ 321
            C        A   G+ T+     I  +P D  V+A                        
Sbjct: 208 ICH-------AHFPGTRTI-----IQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVAL 255

Query: 322 -GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
            GQ     C A   P+   +I WLR S P+   ++    Q+++ +L + K  E D G+Y 
Sbjct: 256 QGQPLVLECIAEGFPT--PTIKWLRPSGPM--PADRVTYQNHNKTLQLLKLGEEDDGEYR 311

Query: 381 CRAQTELDFIEAQATLTVQV 400
           C A+  L        +TV+ 
Sbjct: 312 CLAENSLGSARHAYYVTVEA 331


>gi|395754610|ref|XP_003779806.1| PREDICTED: neural cell adhesion molecule L1 isoform 3 [Pongo
           abelii]
          Length = 1248

 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 196/721 (27%), Positives = 304/721 (42%), Gaps = 80/721 (11%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L +  +   D G Y 
Sbjct: 248 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLKLGEEDDGEYR 306

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 307 CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 365

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 366 IPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 425

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 426 ADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 485

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 486 DTGRYFCLAANDQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPS 545

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 546 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 603

Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
                 VP    S+  L+      +  VSW+P    +       Y ++   ++       
Sbjct: 604 VGSPGPVPRLVLSDLHLLT---QSQVRVSWSPAEDHN--APIEKYDIEFEDKEMAPEKWY 658

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTV----- 507
            L    G  T+T + K  P      RV A N    G PS +  + VTPE  P        
Sbjct: 659 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVK 717

Query: 508 -QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
            +  E   +  +   L+W+    P    + Y+++++  +GT+ GP  E++  +SDP    
Sbjct: 718 GEGNETTNMVITWKPLRWMDWNAPQ---VQYRVQWRP-QGTR-GPWQEQI--VSDPFLMV 770

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
           +  +   P   Y I +      G G E +    + +   D  +              A+P
Sbjct: 771 SNTSTFVP---YEIKVQAVNSQGKGPEPQ--VTIGYSGEDYPQ--------------AIP 811

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVL-DWRQSELVLANQPTFQPYEIKVVQTWTE- 684
           E+E                  E  N   VL  WR  +L    +   + Y    V  W E 
Sbjct: 812 ELE----------------GIEILNSSAVLVKWRPVDLAQV-KGHLRGYN---VTYWREG 851

Query: 685 ---KDGEGSI-RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 740
              K  +  I ++ +V    +T+  +    P S     V AFNG   GP SE  +F TPE
Sbjct: 852 SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGLGPASE-FTFSTPE 910

Query: 741 G 741
           G
Sbjct: 911 G 911



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 174/696 (25%), Positives = 265/696 (38%), Gaps = 94/696 (13%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI +G    +LI+ +V+ SD     CE  
Sbjct: 347  LDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRG----ALILSNVQPSDTMVTQCEAR 402

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + +   A +  T    CKA G P P + W+  +G 
Sbjct: 403  NRHGLLLANAY-IYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGT 461

Query: 165  PISQAP---PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q     P     +G     I +L+ +DTG Y C A N    V   +  N+ +  A +
Sbjct: 462  TVLQDERFFPYANGTLG-----IRDLQANDTGRYFCLAANDQNNV--TIVANLKVKDATQ 514

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWI---HNQKELTGGRYTILETGDLKIT 275
            IT+ P+      G  V  TC+    P  +P + W     + +EL       +E G L I 
Sbjct: 515  ITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITWRGDGRDLQELGDSDKYFIEDGRLVIH 574

Query: 276  DVAFADSGEYTCFARNKLGTAQGSGSLT-----------VKEHTHITDQPEDYEVEAGQS 324
             + ++D G Y+C A  +L   +    L            V    H+  Q +   V    S
Sbjct: 575  SLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQ---VRVSWS 631

Query: 325  ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF------VQSNDYSLTVTKSSELDSGQ 378
                 NA   P  K  I      E  D E  P        V  N  S T+  S  +    
Sbjct: 632  PAEDHNA---PIEKYDI------EFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYV---H 679

Query: 379  YTCRAQTELDFIEAQ---ATLTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSP 428
            YT R      +   +    + TV  P  AP        +D K         V++W P+  
Sbjct: 680  YTFRVTAINKYGPGEPSPVSETVVTPEAAPEK----NPVDVKGEGNETTNMVITWKPLRW 735

Query: 429  QSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
                     Y+VQ W  +   G  +E IV+      +    FVP      +V A N    
Sbjct: 736  MDWNAPQVQYRVQ-WRPQGTRGPWQEQIVSDPFLMVSNTSTFVPYE---IKVQAVNSQGK 791

Query: 489  GPPSEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QS 543
            GP  ++    + E  P  +  LE I  L SSA  +KW  V   Q  G L GY + Y  + 
Sbjct: 792  GPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGYNVTYWREG 851

Query: 544  VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF- 602
             +       + +   +    TTS  L+GL P + Y + +  +   G G  S++ F  P  
Sbjct: 852  SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGLGPASEFTFSTPEG 911

Query: 603  --KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ 660
               +P+ +     +  +L++ W   P + HN     Y + +  H   E        + R 
Sbjct: 912  VPGHPEALHLECQSNTSLLLRW--QPPLSHNGVLTGYVLSY--HPLDEGGKGQLSFNLRD 967

Query: 661  SELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
             EL   N     P   Y  ++  T  E  GE  +RE
Sbjct: 968  PELRTHNLTDLSPHLRYRFQLQATTKEGPGEAIVRE 1003



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 93/389 (23%), Positives = 161/389 (41%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS----QGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P + +     Q  +  S  I   + 
Sbjct: 38  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSFTITGNNS 97

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P      E E+V   C  
Sbjct: 98  NFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPV--EVEEGESVVLPCNP 155

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 156 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 213

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 214 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 273

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++  +   D GEY C A N LG+A+ +  +TV+   +   +
Sbjct: 274 PSGPMPADRVTYQNHNKTLQLLKLGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHK 333

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++  ++ +  +    +L ++    
Sbjct: 334 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQP 391

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A+     + A A +  VQ+P
Sbjct: 392 SDTMVTQCEARNRHGLLLANAYIYVVQLP 420


>gi|33354081|dbj|BAC81124.1| L1 cell adhesion molecule [Pongo pygmaeus]
          Length = 1255

 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 196/721 (27%), Positives = 304/721 (42%), Gaps = 80/721 (11%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L +  +   D G Y 
Sbjct: 251 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLKLGEEDDGEYR 309

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 310 CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 368

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 369 IPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 428

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 429 ADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 488

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 489 DTGRYFCLAANDQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPS 548

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 549 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 606

Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
                 VP    S+  L+      +  VSW+P    +       Y ++   ++       
Sbjct: 607 VGSPGPVPRLVLSDLHLLT---QSQVRVSWSPAEDHN--APIEKYDIEFEDKEMAPEKWY 661

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTV----- 507
            L    G  T+T + K  P      RV A N    G PS +  + VTPE  P        
Sbjct: 662 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVK 720

Query: 508 -QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
            +  E   +  +   L+W+    P    + Y+++++  +GT+ GP  E++  +SDP    
Sbjct: 721 GEGNETTNMVITWKPLRWMDWNAPQ---VQYRVQWRP-QGTR-GPWQEQI--VSDPFLMV 773

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
           +  +   P   Y I +      G G E +    + +   D  +              A+P
Sbjct: 774 SNTSTFVP---YEIKVQAVNSQGKGPEPQ--VTIGYSGEDYPQ--------------AIP 814

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVL-DWRQSELVLANQPTFQPYEIKVVQTWTE- 684
           E+E                  E  N   VL  WR  +L    +   + Y    V  W E 
Sbjct: 815 ELE----------------GIEILNSSAVLVKWRPVDLAQV-KGHLRGYN---VTYWREG 854

Query: 685 ---KDGEGSI-RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 740
              K  +  I ++ +V    +T+  +    P S     V AFNG   GP SE  +F TPE
Sbjct: 855 SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGLGPASE-FTFSTPE 913

Query: 741 G 741
           G
Sbjct: 914 G 914



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 174/696 (25%), Positives = 265/696 (38%), Gaps = 94/696 (13%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI +G    +LI+ +V+ SD     CE  
Sbjct: 350  LDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRG----ALILSNVQPSDTMVTQCEAR 405

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + +   A +  T    CKA G P P + W+  +G 
Sbjct: 406  NRHGLLLANAY-IYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGT 464

Query: 165  PISQAP---PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q     P     +G     I +L+ +DTG Y C A N    V   +  N+ +  A +
Sbjct: 465  TVLQDERFFPYANGTLG-----IRDLQANDTGRYFCLAANDQNNV--TIVANLKVKDATQ 517

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWI---HNQKELTGGRYTILETGDLKIT 275
            IT+ P+      G  V  TC+    P  +P + W     + +EL       +E G L I 
Sbjct: 518  ITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITWRGDGRDLQELGDSDKYFIEDGRLVIH 577

Query: 276  DVAFADSGEYTCFARNKLGTAQGSGSLT-----------VKEHTHITDQPEDYEVEAGQS 324
             + ++D G Y+C A  +L   +    L            V    H+  Q +   V    S
Sbjct: 578  SLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQ---VRVSWS 634

Query: 325  ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF------VQSNDYSLTVTKSSELDSGQ 378
                 NA   P  K  I      E  D E  P        V  N  S T+  S  +    
Sbjct: 635  PAEDHNA---PIEKYDI------EFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYV---H 682

Query: 379  YTCRAQTELDFIEAQ---ATLTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSP 428
            YT R      +   +    + TV  P  AP        +D K         V++W P+  
Sbjct: 683  YTFRVTAINKYGPGEPSPVSETVVTPEAAPEK----NPVDVKGEGNETTNMVITWKPLRW 738

Query: 429  QSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
                     Y+VQ W  +   G  +E IV+      +    FVP      +V A N    
Sbjct: 739  MDWNAPQVQYRVQ-WRPQGTRGPWQEQIVSDPFLMVSNTSTFVPYE---IKVQAVNSQGK 794

Query: 489  GPPSEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QS 543
            GP  ++    + E  P  +  LE I  L SSA  +KW  V   Q  G L GY + Y  + 
Sbjct: 795  GPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGYNVTYWREG 854

Query: 544  VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF- 602
             +       + +   +    TTS  L+GL P + Y + +  +   G G  S++ F  P  
Sbjct: 855  SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGLGPASEFTFSTPEG 914

Query: 603  --KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ 660
               +P+ +     +  +L++ W   P + HN     Y + +  H   E        + R 
Sbjct: 915  VPGHPEALHLECQSNTSLLLRW--QPPLSHNGVLTGYVLSY--HPLDEGGKGQLSFNLRD 970

Query: 661  SELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
             EL   N     P   Y  ++  T  E  GE  +RE
Sbjct: 971  PELRTHNLTDLSPHLRYRFQLQATTKEGPGEAIVRE 1006



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 93/389 (23%), Positives = 161/389 (41%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS----QGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P + +     Q  +  S  I   + 
Sbjct: 41  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSFTITGNNS 100

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P      E E+V   C  
Sbjct: 101 NFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPV--EVEEGESVVLPCNP 158

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 159 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 216

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 217 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 276

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++  +   D GEY C A N LG+A+ +  +TV+   +   +
Sbjct: 277 PSGPMPADRVTYQNHNKTLQLLKLGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHK 336

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++  ++ +  +    +L ++    
Sbjct: 337 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQP 394

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A+     + A A +  VQ+P
Sbjct: 395 SDTMVTQCEARNRHGLLLANAYIYVVQLP 423



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 126/320 (39%), Gaps = 60/320 (18%)

Query: 122 VLAAPYFTVE-PEFINAAEEETVTFECKASGLPEPEIHWVHNG---KP-------ISQAP 170
           V+  P  T + P  +     + ++ +C+ASG PE +  W  +G   KP       + Q+P
Sbjct: 29  VMEPPVITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSP 88

Query: 171 PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEAPKDEY 229
            +    +  N     N  +   G Y C A+N LG         +   AP+   E  K   
Sbjct: 89  HSGSFTITGNN---SNFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVE 145

Query: 230 TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL---TGGRYTILETGDLKITDVAFADS-GEY 285
             +G++VVL C    + +P   +  N K L      R T+ + G+L   +V  +D+  +Y
Sbjct: 146 VEEGESVVLPCNPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDY 205

Query: 286 TCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA------------------------ 321
            C        A   G+ T+     I  +P D  V+A                        
Sbjct: 206 ICH-------AHFPGTRTI-----IQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVAL 253

Query: 322 -GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
            GQ     C A   P+   +I WLR S P+   ++    Q+++ +L + K  E D G+Y 
Sbjct: 254 QGQPLVLECIAEGFPT--PTIKWLRPSGPM--PADRVTYQNHNKTLQLLKLGEEDDGEYR 309

Query: 381 CRAQTELDFIEAQATLTVQV 400
           C A+  L        +TV+ 
Sbjct: 310 CLAENSLGSARHAYYVTVEA 329


>gi|387849148|ref|NP_001248708.1| L1 cell adhesion molecule precursor [Macaca mulatta]
 gi|380812680|gb|AFE78214.1| neural cell adhesion molecule L1 isoform 1 precursor [Macaca
           mulatta]
          Length = 1257

 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 197/721 (27%), Positives = 303/721 (42%), Gaps = 80/721 (11%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L +  V   D G Y 
Sbjct: 253 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLKVGEEDDGEYR 311

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 312 CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 370

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N + SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 371 IPMEELAKDQKYRIQRGALILSNAQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 430

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 431 ADNQTYVAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 490

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 491 DTGRYFCLAANDQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPS 550

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 551 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 608

Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
                 VP    S+  L+      +  VSW+P    +       Y ++   ++       
Sbjct: 609 VGSPGPVPRLVLSDLHLLT---QSQVRVSWSPAEDHN--APIEKYDIEFEDKEMAPEKWY 663

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTV----- 507
            L    G  T+T + K  P      RV A N    G PS +  + VTPE  P        
Sbjct: 664 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVK 722

Query: 508 -QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
            +  E   +  +   L+W+    P    + Y+++++  +GT+ GP  E++  +SDP    
Sbjct: 723 GEGNETTNMVITWKPLRWMDWNAPQ---VQYRVQWRP-QGTR-GPWQEQI--VSDPFLVV 775

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
           +  +   P   Y I +      G G E +    + +   D  +              A+P
Sbjct: 776 SNTSTFVP---YEIKVQAVNSQGKGPEPQ--VTIGYSGEDYPQ--------------AIP 816

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVL-DWRQSELVLANQPTFQPYEIKVVQTWTE- 684
           E+E                  E  N   VL  WR  +L    +   + Y    V  W E 
Sbjct: 817 ELE----------------GIEILNSSAVLVKWRPVDLAQV-KGHLRGYN---VTYWREG 856

Query: 685 ---KDGEGSI-RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 740
              K  +  I ++ +V    +T+  +    P S     V AFNG   GP SE  +F TPE
Sbjct: 857 SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGLGPASE-FTFSTPE 915

Query: 741 G 741
           G
Sbjct: 916 G 916



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 173/696 (24%), Positives = 264/696 (37%), Gaps = 94/696 (13%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI +G    +LI+ + + SD     CE  
Sbjct: 352  LDCQVQGRPQPEVTWRINGIPMEELAKDQKYRIQRG----ALILSNAQPSDTMVTQCEAR 407

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + +   A +  T    CKA G P P + W+  +G 
Sbjct: 408  NRHGLLLANAY-IYVVQLPAKILTADNQTYVAVQGSTAYLLCKAFGAPVPSVQWLDEDGT 466

Query: 165  PISQAP---PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q     P     +G     I +L+ +DTG Y C A N    V   +  N+ +  A +
Sbjct: 467  TVLQDERFFPYANGTLG-----IRDLQANDTGRYFCLAANDQNNV--TIVANLKVKDATQ 519

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWI---HNQKELTGGRYTILETGDLKIT 275
            IT+ P+      G  V  TC+    P  +P + W     + +EL       +E G L I 
Sbjct: 520  ITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITWRGDGRDLQELGDSDKYFIEDGRLVIH 579

Query: 276  DVAFADSGEYTCFARNKLGTAQGSGSLT-----------VKEHTHITDQPEDYEVEAGQS 324
             + ++D G Y+C A  +L   +    L            V    H+  Q +   V    S
Sbjct: 580  SLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQ---VRVSWS 636

Query: 325  ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF------VQSNDYSLTVTKSSELDSGQ 378
                 NA   P  K  I      E  D E  P        V  N  S T+  S  +    
Sbjct: 637  PAEDHNA---PIEKYDI------EFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYV---H 684

Query: 379  YTCRAQTELDFIEAQ---ATLTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSP 428
            YT R      +   +    + TV  P  AP        +D K         V++W P+  
Sbjct: 685  YTFRVTAINKYGPGEPSPVSETVVTPEAAPEK----NPVDVKGEGNETTNMVITWKPLRW 740

Query: 429  QSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
                     Y+VQ W  +   G  +E IV+      +    FVP      +V A N    
Sbjct: 741  MDWNAPQVQYRVQ-WRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYE---IKVQAVNSQGK 796

Query: 489  GPPSEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QS 543
            GP  ++    + E  P  +  LE I  L SSA  +KW  V   Q  G L GY + Y  + 
Sbjct: 797  GPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGYNVTYWREG 856

Query: 544  VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF- 602
             +       + +   +    TTS  L+GL P + Y + +  +   G G  S++ F  P  
Sbjct: 857  SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGLGPASEFTFSTPEG 916

Query: 603  --KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ 660
               +P+ +     +  +L++ W   P + HN     Y + +  H   E        + R 
Sbjct: 917  VPGHPEALHLECQSNTSLLLRW--QPPLSHNGVLTGYVLSY--HPLDEGGKGQLSFNLRD 972

Query: 661  SELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
             EL   N     P   Y  ++  T  E  GE  +RE
Sbjct: 973  PELRTHNLTDLSPHLRYRFQLQATTKEGPGEAIVRE 1008



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 162/389 (41%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS----QGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P + +     Q  +  S  I   + 
Sbjct: 43  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSFTITGNNS 102

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P      E E+V   C  
Sbjct: 103 NFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPV--EVEEGESVVLPCHP 160

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 161 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 218

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 219 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 278

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++  V   D GEY C A N LG+A+ +  +TV+   +   +
Sbjct: 279 PSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHK 338

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++  ++ +  +    +L ++ +  
Sbjct: 339 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPMEELAKDQKYRIQRGALILSNAQP 396

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A+     + A A +  VQ+P
Sbjct: 397 SDTMVTQCEARNRHGLLLANAYIYVVQLP 425



 Score = 45.8 bits (107), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 126/320 (39%), Gaps = 60/320 (18%)

Query: 122 VLAAPYFTVE-PEFINAAEEETVTFECKASGLPEPEIHWVHNG---KP-------ISQAP 170
           V+  P  T + P  +     + ++ +C+ASG PE +  W  +G   KP       + Q+P
Sbjct: 31  VMEPPVITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSP 90

Query: 171 PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEAPKDEY 229
            +    +  N     N  +   G Y C A+N LG         +   AP+   E  K   
Sbjct: 91  HSGSFTITGNN---SNFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVE 147

Query: 230 TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL---TGGRYTILETGDLKITDVAFADS-GEY 285
             +G++VVL C    + +P   +  N K L      R T+ + G+L   +V  +D+  +Y
Sbjct: 148 VEEGESVVLPCHPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDY 207

Query: 286 TCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA------------------------ 321
            C        A   G+ T+     I  +P D  V+A                        
Sbjct: 208 ICH-------AHFPGTRTI-----IQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVAL 255

Query: 322 -GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
            GQ     C A   P+   +I WLR S P+   ++    Q+++ +L + K  E D G+Y 
Sbjct: 256 QGQPLVLECIAEGFPT--PTIKWLRPSGPM--PADRVTYQNHNKTLQLLKVGEEDDGEYR 311

Query: 381 CRAQTELDFIEAQATLTVQV 400
           C A+  L        +TV+ 
Sbjct: 312 CLAENSLGSARHAYYVTVEA 331


>gi|432847558|ref|XP_004066082.1| PREDICTED: protein sidekick-1-like [Oryzias latipes]
          Length = 2122

 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 175/629 (27%), Positives = 272/629 (43%), Gaps = 56/629 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTI--WSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           K    +  +   L CI    P+   +  W +DG  +           G  LII    FSD
Sbjct: 202 KNTTVVVGQGATLECIANARPVDGLMVSWKRDGRWLA---------TGHQLIIPSPVFSD 252

Query: 99  QGSYTCE--VSNGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPEP 155
            G Y CE  +SN   +       L+V+  P+  V+P+  I A  ++ V   C+ASG+P P
Sbjct: 253 TGLYVCEALLSNSTAKPVEAKAHLTVMEPPFLAVQPKGKIFADLDKNVDIPCQASGVPPP 312

Query: 156 EIHWVHNGKPISQAPPNPRRKVG-PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
            I W  +  P+S+   NPR +V     +T+  ++  D G + C A +S G       + V
Sbjct: 313 RIEWYKDAVPLSKLA-NPRYRVNTATGLTVRRVQLGDGGIFQCFARSSAGETQAHTELLV 371

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILET 269
            +  P  T  P D+   +G+TVV  C   GAPKP + W    + +  G     R+T+L++
Sbjct: 372 SSVGPIFTFPPSDQTVTEGETVVFACEHSGAPKPAITWRKGLQIVASGSVQVPRFTLLQS 431

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I  ++F DSG++TC A N  G+   + +LTV   T ++  P D  V  G +A   C
Sbjct: 432 GGLQIKPISFQDSGQFTCTASNSEGSINATAALTVWRRTFLSVPPTDQRVIKGTTAVLEC 491

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
           NA  D  + +S  W RG  P+   S    V  +  SL+++++   D G YTC   +    
Sbjct: 492 NATHDSRINISFKWDRGGVPV-LSSGGGRVSVSQGSLSISQTWSGDIGDYTCTVTSRAGN 550

Query: 390 IEAQATLTVQVPLEAPSNFTL-IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
               A L V     +P + T      D++  ++SW  + P      F  Y +    E   
Sbjct: 551 DSHTARLEVIELPHSPRSLTARFNDSDSRSVLLSW--LRPFDGNSPFLHYVL----ELSE 604

Query: 449 EGSIRELIVNKGESTTTEVD--KFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPG 505
             S  ++ +++ + + TEV      PA     R+ A N    G  S E    +  E  P 
Sbjct: 605 NNSPWKVYLSEVDPSVTEVSVGGLTPARTYQFRLCAVNQVGRGQYSAETQRLMLREEAPS 664

Query: 506 T-VQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLP----- 557
              +++ A    + +  ++W  P +P  NGVL GY ++Y+          L  LP     
Sbjct: 665 APPKNIVASGRTNQSIMVQWQPPPEPELNGVLRGYLLRYR----------LAGLPGDYQE 714

Query: 558 -YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGR 611
             IS P T    L  L   T+Y+I +A YT AG G  S       L  VP   P  VE  
Sbjct: 715 KNISSPETNYCLLKDLIIWTQYQIQVAAYTGAGLGVYSSPVTEYTLQGVPTAPPQEVEVV 774

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
                 +  +W   P+   N  +  Y++ 
Sbjct: 775 AINSTTIRFTWNPPPQQFINGINQGYKLM 803



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 161/655 (24%), Positives = 258/655 (39%), Gaps = 72/655 (10%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV-GE------- 112
           P P   W KDG  I P++RI+       L++     SD G Y  E  N + GE       
Sbjct: 121 PQPLITWYKDGHKIIPNNRIAV-TLDNQLVVLATTASDAGGYHAEAMNEMTGENVTSPTV 179

Query: 113 --AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEP--EIHWVHNGKPISQ 168
             + S + D S L AP   + P+       +  T EC A+  P     + W  +G+ ++ 
Sbjct: 180 YLSISAATDKSELVAPTIVIGPKNTTVVVGQGATLECIANARPVDGLMVSWKRDGRWLAT 239

Query: 169 APPNPRRKVGPNRITIENLRKSDTGNYGCNA--TNSLGY-VYKDVYVNVLAHAPEITEAP 225
                      +++ I +   SDTG Y C A  +NS    V    ++ V+   P +   P
Sbjct: 240 G----------HQLIIPSPVFSDTGLYVCEALLSNSTAKPVEAKAHLTVM-EPPFLAVQP 288

Query: 226 KDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITDVAFAD 281
           K +   D  K V + C+  G P P + W  +     +L   RY +     L +  V   D
Sbjct: 289 KGKIFADLDKNVDIPCQASGVPPPRIEWYKDAVPLSKLANPRYRVNTATGLTVRRVQLGD 348

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHI-TDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            G + CFAR+  G  Q    L V     I T  P D  V  G++  F C     P  K +
Sbjct: 349 GGIFQCFARSSAGETQAHTELLVSSVGPIFTFPPSDQTVTEGETVVFACEHSGAP--KPA 406

Query: 341 IVWLRGSEPIDFES--EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W +G + +   S   PRF       L +   S  DSGQ+TC A      I A A LTV
Sbjct: 407 ITWRKGLQIVASGSVQVPRFTLLQSGGLQIKPISFQDSGQFTCTASNSEGSINATAALTV 466

Query: 399 --QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYK--VQTWTEKDGEGSIRE 454
             +  L  P   T  +VI    AV+  N      +   F+  +  V   +   G  S+ +
Sbjct: 467 WRRTFLSVPP--TDQRVIKGTTAVLECNATHDSRINISFKWDRGGVPVLSSGGGRVSVSQ 524

Query: 455 LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAI- 513
             ++  ++ + ++  +     + A   +          E+I        P + +SL A  
Sbjct: 525 GSLSISQTWSGDIGDYTCTVTSRAGNDSHTARL-----EVIEL------PHSPRSLTARF 573

Query: 514 -PLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERLPYIS--DPTTTSAKL 569
               S +  L W++P   N   + Y ++        KV        Y+S  DP+ T   +
Sbjct: 574 NDSDSRSVLLSWLRPFDGNSPFLHYVLELSENNSPWKV--------YLSEVDPSVTEVSV 625

Query: 570 AGLEPSTKYRIHLAGYTKAGDG---AESKYLFY---VPFKNPDNVEGRGSTPNNLVISWT 623
            GL P+  Y+  L    + G G   AE++ L      P   P N+   G T  ++++ W 
Sbjct: 626 GGLTPARTYQFRLCAVNQVGRGQYSAETQRLMLREEAPSAPPKNIVASGRTNQSIMVQWQ 685

Query: 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
             PE E N     Y + +R       + + ++     +  +L +   +  Y+I+V
Sbjct: 686 PPPEPELNGVLRGYLLRYRLAGLPGDYQEKNISSPETNYCLLKDLIIWTQYQIQV 740



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 143/601 (23%), Positives = 238/601 (39%), Gaps = 79/601 (13%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI----NPSDRISQGNYGKSLIIKHVE 95
           + K  A  +K V++ C   G P P+  W KD VP+    NP  R+   N    L ++ V+
Sbjct: 289 KGKIFADLDKNVDIPCQASGVPPPRIEWYKDAVPLSKLANPRYRV---NTATGLTVRRVQ 345

Query: 96  FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEP 155
             D G + C   +  GE ++++  L     P FT  P      E ETV F C+ SG P+P
Sbjct: 346 LGDGGIFQCFARSSAGETQAHTELLVSSVGPIFTFPPSDQTVTEGETVVFACEHSGAPKP 405

Query: 156 EIHWVHNGKPIS----QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVY 211
            I W    + ++    Q P     + G   + I+ +   D+G + C A+NS G +     
Sbjct: 406 AITWRKGLQIVASGSVQVPRFTLLQSG--GLQIKPISFQDSGQFTCTASNSEGSINATAA 463

Query: 212 VNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL----TGGRYTIL 267
           + V      ++  P D+  + G T VL C      +  +++  ++  +    +GG    +
Sbjct: 464 LTVWRRT-FLSVPPTDQRVIKGTTAVLECNATHDSRINISFKWDRGGVPVLSSGGGRVSV 522

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
             G L I+     D G+YTC   ++ G    +  L V E  H           + +S T 
Sbjct: 523 SQGSLSISQTWSGDIGDYTCTVTSRAGNDSHTARLEVIELPH-----------SPRSLTA 571

Query: 328 RCNAVSDPSLKLSIVWLR---GSEPIDF-----------------ESEPRFVQ------- 360
           R N     S+ LS  WLR   G+ P                    E +P   +       
Sbjct: 572 RFNDSDSRSVLLS--WLRPFDGNSPFLHYVLELSENNSPWKVYLSEVDPSVTEVSVGGLT 629

Query: 361 -SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKA 419
            +  Y   +   +++  GQY+   Q        +  L  + P   P N       + +  
Sbjct: 630 PARTYQFRLCAVNQVGRGQYSAETQ--------RLMLREEAPSAPPKNIVASGRTN-QSI 680

Query: 420 VVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR 479
           +V W P     L G  RGY ++ +      G  +E  ++  E+    +   +  ++   +
Sbjct: 681 MVQWQPPPEPELNGVLRGYLLR-YRLAGLPGDYQEKNISSPETNYCLLKDLIIWTQYQIQ 739

Query: 480 VLAFNGAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMG 536
           V A+ GA  G  S  ++  T +GVP    Q +E + + S+     W  P Q   NG+  G
Sbjct: 740 VAAYTGAGLGVYSSPVTEYTLQGVPTAPPQEVEVVAINSTTIRFTWNPPPQQFINGINQG 799

Query: 537 YKIKY---QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
           YK+     QS +  K   +    P +      +  ++GL+  T Y      +T  GDG  
Sbjct: 800 YKLMVWPEQSPEDMKTVTITPDYPSLRH----TGLVSGLKKFTWYFGSTLCFTTPGDGPR 855

Query: 594 S 594
           S
Sbjct: 856 S 856



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 151/621 (24%), Positives = 233/621 (37%), Gaps = 59/621 (9%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKS 88
           P  Q VT  + V          C   G P P   W K G+ I  S  +    +       
Sbjct: 382 PSDQTVTEGETVVFA-------CEHSGAPKPAITWRK-GLQIVASGSVQVPRFTLLQSGG 433

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECK 148
           L IK + F D G +TC  SN  G   + +  L+V    + +V P      +  T   EC 
Sbjct: 434 LQIKPISFQDSGQFTCTASNSEGSINA-TAALTVWRRTFLSVPPTDQRVIKGTTAVLECN 492

Query: 149 ASGLPEPEI--HWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV 206
           A+      I   W   G P+  +    R  V    ++I      D G+Y C  T+  G  
Sbjct: 493 ATHDSRINISFKWDRGGVPVLSSGGG-RVSVSQGSLSISQTWSGDIGDYTCTVTSRAGND 551

Query: 207 YKDVYVNV--LAHAPEITEAPKDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGR 263
                + V  L H+P    A  ++   D ++V+L+  R F    P ++++    E     
Sbjct: 552 SHTARLEVIELPHSPRSLTARFNDS--DSRSVLLSWLRPFDGNSPFLHYVLELSENNSPW 609

Query: 264 YTILETGDLKITDVAF-----ADSGEYTCFARNKLGTAQGSGS---LTVKEHTHITDQPE 315
              L   D  +T+V+      A + ++   A N++G  Q S     L ++E       P 
Sbjct: 610 KVYLSEVDPSVTEVSVGGLTPARTYQFRLCAVNQVGRGQYSAETQRLMLREEA--PSAPP 667

Query: 316 DYEVEAG---QSATFRCNAVSDPSLK--LSIVWLR---GSEPIDFESEPRFVQSNDYSL- 366
              V +G   QS   +     +P L   L    LR      P D++ +       +Y L 
Sbjct: 668 KNIVASGRTNQSIMVQWQPPPEPELNGVLRGYLLRYRLAGLPGDYQEKNISSPETNYCLL 727

Query: 367 ---TVTKSSELDSGQYTCRAQTELDFIEAQAT-LTVQVPLEAPSNFTLIQVIDAKKAVVS 422
               +    ++    YT      L    +  T  T+Q    AP     +  I++     +
Sbjct: 728 KDLIIWTQYQIQVAAYTGAG---LGVYSSPVTEYTLQGVPTAPPQEVEVVAINSTTIRFT 784

Query: 423 WNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGEST--TTEVDKFVPASKNFARV 480
           WNP   Q + G  +GYK+  W E+  E      I     S   T  V      +  F   
Sbjct: 785 WNPPPQQFINGINQGYKLMVWPEQSPEDMKTVTITPDYPSLRHTGLVSGLKKFTWYFGST 844

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
           L F    +GP S      T E  PG V  L       +   + W +P++ NG++ GY + 
Sbjct: 845 LCFTTPGDGPRSPPTLLQTHEDTPGPVHQLTFTETLDTTVRVSWAEPKEKNGIITGYTLW 904

Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV 600
           ++ V G +   +   LP     +T   +L GL  +TKY I +A  T AG G  +      
Sbjct: 905 WE-VPGVESSLVERSLPN----STLQYQLTGLNSTTKYTIQVAALTAAGQGVVTSSTIST 959

Query: 601 PFKNPDNVEGRGSTPNNLVIS 621
               P  + G    P+NLVIS
Sbjct: 960 GV--PPELPG---APSNLVIS 975



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 93/385 (24%), Positives = 147/385 (38%), Gaps = 36/385 (9%)

Query: 32  APKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLII 91
           AP  Q V + K+V L   ++ L C  GG+      W+ +      +  I+       L I
Sbjct: 5   APYLQGVGQAKQVVLEGNRLVLTCPAGGSWPLHYRWTLN------NSNITDWTLQNRLSI 58

Query: 92  KHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC-KAS 150
             ++ +D G Y C V N +G       ++ V     FT + +    ++           +
Sbjct: 59  PSLKRNDAGLYQCMVRNRMGALIHRKTEVHVAFLGNFTGKEQRSTVSQGRAAVISLPPLA 118

Query: 151 GLPEPEIHWVHNGKPISQAPPNPRRKVG-PNRITIENLRKSDTGNYGCNATNSL---GYV 206
             P+P I W  +G  I    PN R  V   N++ +     SD G Y   A N +      
Sbjct: 119 SFPQPLITWYKDGHKII---PNNRIAVTLDNQLVVLATTASDAGGYHAEAMNEMTGENVT 175

Query: 207 YKDVYVNVLAH-------APEITEAPKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQK 257
              VY+++ A        AP I   PK+   V G+   L C     P     V+W  + +
Sbjct: 176 SPTVYLSISAATDKSELVAPTIVIGPKNTTVVVGQGATLECIANARPVDGLMVSWKRDGR 235

Query: 258 ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTA---QGSGSLTVKEHTHITDQP 314
            L  G         L I    F+D+G Y C A     TA   +    LTV E   +  QP
Sbjct: 236 WLATGH-------QLIIPSPVFSDTGLYVCEALLSNSTAKPVEAKAHLTVMEPPFLAVQP 288

Query: 315 E-DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           +     +  ++    C A   P  +  I W + + P+   + PR+  +    LTV +   
Sbjct: 289 KGKIFADLDKNVDIPCQASGVPPPR--IEWYKDAVPLSKLANPRYRVNTATGLTVRRVQL 346

Query: 374 LDSGQYTCRAQTELDFIEAQATLTV 398
            D G + C A++     +A   L V
Sbjct: 347 GDGGIFQCFARSSAGETQAHTELLV 371



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 98/239 (41%), Gaps = 28/239 (11%)

Query: 180 NRITIENLRKSDTGNYGCNATNSLG-YVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVL 238
           NR++I +L+++D G Y C   N +G  +++   V+V A     T   +      G+  V+
Sbjct: 54  NRLSIPSLKRNDAGLYQCMVRNRMGALIHRKTEVHV-AFLGNFTGKEQRSTVSQGRAAVI 112

Query: 239 TCRVFGA-PKPEVNWIHN-QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTA 296
           +     + P+P + W  +  K +   R  +     L +     +D+G Y   A N++   
Sbjct: 113 SLPPLASFPQPLITWYKDGHKIIPNNRIAVTLDNQLVVLATTASDAGGYHAEAMNEMTGE 172

Query: 297 QGSGSLTVKEHTHITDQ-----------PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLR 345
             +        +  TD+           P++  V  GQ AT  C A + P   L + W R
Sbjct: 173 NVTSPTVYLSISAATDKSELVAPTIVIGPKNTTVVVGQGATLECIANARPVDGLMVSWKR 232

Query: 346 GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA---QTELDFIEAQATLTVQVP 401
                    + R++ +  + L +      D+G Y C A    +    +EA+A LTV  P
Sbjct: 233 ---------DGRWL-ATGHQLIIPSPVFSDTGLYVCEALLSNSTAKPVEAKAHLTVMEP 281



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 4/143 (2%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR-GHFRGYKVQTWTEKDGEGSIRELIVNK 459
            P  +P N T  + + + K +++W+ + PQ+ R G   GYKV  ++EKD E     L+V  
Sbjct: 1172 PSGSPVNVT-AEAVSSSKIMLTWSAL-PQTQRNGVILGYKV-LYSEKDLEAPPSVLVVQG 1228

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
              + T  +      +    +VLAF    +GP S  +   T E VPG    +    +  ++
Sbjct: 1229 EGNLTVLLGALQKYTVYVLQVLAFTRIGDGPLSNPVLLRTKEDVPGPPVRMLFPEVRLTS 1288

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P  PNG+++GY+I Y+
Sbjct: 1289 VRVVWQPPGLPNGIILGYQISYR 1311



 Score = 47.0 bits (110), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 1/122 (0%)

Query: 421  VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
            V+W+    ++  G  +GYK+  W E+D +    ++ V     T   +      +     +
Sbjct: 1614 VTWDMPPLETQNGLIQGYKIHYW-ERDKQNQTEKVKVIFIPETRVHLHNLTSYTPYLVTL 1672

Query: 481  LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
             AFN A +GPPS+     T +  P     L    +   +  + W  P  PNG + GY++ 
Sbjct: 1673 TAFNTAGDGPPSDPRGARTRQSAPSQPSFLSFSEVTGGSVNVSWGPPITPNGQVEGYRVI 1732

Query: 541  YQ 542
            YQ
Sbjct: 1733 YQ 1734



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 28/252 (11%)

Query: 463  TTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGTVQSLEAI-PLGSSAF 520
            T+  VD+  P +    R++A N   +   S E  S  T + VP     + ++ P  +++ 
Sbjct: 1431 TSWTVDRLKPFTSYKFRMVATNDVGDSLFSKETDSVTTLQDVPNEPPVILSVKPTTTTSV 1490

Query: 521  YLKWVKP--EQPNGVLMGYKIKY---------------QSVKGTKVGPLLERLPY--ISD 561
             + W +P  E  NGVL GY++ Y               Q+ K T    +  +  +  IS 
Sbjct: 1491 LIHWKRPKEESINGVLAGYRLYYRELPANESSFPQAEVQTTKNTTSALIAAKSTFKTISS 1550

Query: 562  PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEGRGSTPN 616
             + T  +L  L+  T+Y+I +  Y   G+   S  +        P   P +++    +P 
Sbjct: 1551 ASLTEFELTQLKRFTRYQIVMTSYNIIGESPPSTAVDVSVGEAAPSVAPQSIKVSAVSPT 1610

Query: 617  NLVISWTAMPEIEHNAPHFKYRI-FWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYE 675
            +L ++W   P    N     Y+I +W R    +   +  V+   ++ + L N  ++ PY 
Sbjct: 1611 SLEVTWDMPPLETQNGLIQGYKIHYWERDKQNQT-EKVKVIFIPETRVHLHNLTSYTPYL 1669

Query: 676  IKVVQTWTEKDG 687
            + +    T  DG
Sbjct: 1670 VTLTAFNTAGDG 1681



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 60/273 (21%), Positives = 114/273 (41%), Gaps = 32/273 (11%)

Query: 390  IEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
            +   +T++  VP E   APSN  +I  I  +KA + + P  P   +     + V+    +
Sbjct: 951  VVTSSTISTGVPPELPGAPSNL-VISNISPRKATLKFRP-GPDG-KTTISRWIVEAQVRE 1007

Query: 447  DGEGSIRELIV--NKGESTTTEVDKFVPASKNFARVLAFNGAYNGP---PSEIISFVTPE 501
            DG+     ++   N  ++ T E+    P ++   R+   N   + P   PS +I   T +
Sbjct: 1008 DGKEDTWRVVYEENHPDADTLEIPNLTPFTQYRFRMQQVNIVGSSPMSAPSRLIQ--TLQ 1065

Query: 502  GVPGTVQS-LEAIPLGSSAFYLKWVKP-------EQPNGVLMGYKIKYQSVKGTKVGPLL 553
              P T  S L  +    ++    W KP         P  V  GY+++     G       
Sbjct: 1066 AAPDTHPSNLRLVSATQTSLRFSW-KPLPASEYNSSPETV--GYRLRVWRTDGQGKDRTQ 1122

Query: 554  ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-----AESKYLFYVPFKNPDNV 608
            +    ++   +T A + GL P T+Y I +  +   G G      E++     P  +P NV
Sbjct: 1123 DVQGGVN---STDATVDGLSPWTQYHIQVQSFNSIGAGPWSSTVEARTAESAPSGSPVNV 1179

Query: 609  EGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
                 + + ++++W+A+P+ + N     Y++ +
Sbjct: 1180 TAEAVSSSKIMLTWSALPQTQRNGVILGYKVLY 1212


>gi|297711417|ref|XP_002832333.1| PREDICTED: neural cell adhesion molecule L1 isoform 1 [Pongo
           abelii]
          Length = 1257

 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 196/721 (27%), Positives = 304/721 (42%), Gaps = 80/721 (11%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L +  +   D G Y 
Sbjct: 253 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLKLGEEDDGEYR 311

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 312 CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 370

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 371 IPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 430

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 431 ADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 490

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 491 DTGRYFCLAANDQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPS 550

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 551 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 608

Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
                 VP    S+  L+      +  VSW+P    +       Y ++   ++       
Sbjct: 609 VGSPGPVPRLVLSDLHLLT---QSQVRVSWSPAEDHN--APIEKYDIEFEDKEMAPEKWY 663

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTV----- 507
            L    G  T+T + K  P      RV A N    G PS +  + VTPE  P        
Sbjct: 664 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVK 722

Query: 508 -QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
            +  E   +  +   L+W+    P    + Y+++++  +GT+ GP  E++  +SDP    
Sbjct: 723 GEGNETTNMVITWKPLRWMDWNAPQ---VQYRVQWRP-QGTR-GPWQEQI--VSDPFLMV 775

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
           +  +   P   Y I +      G G E +    + +   D  +              A+P
Sbjct: 776 SNTSTFVP---YEIKVQAVNSQGKGPEPQ--VTIGYSGEDYPQ--------------AIP 816

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVL-DWRQSELVLANQPTFQPYEIKVVQTWTE- 684
           E+E                  E  N   VL  WR  +L    +   + Y    V  W E 
Sbjct: 817 ELE----------------GIEILNSSAVLVKWRPVDLAQV-KGHLRGYN---VTYWREG 856

Query: 685 ---KDGEGSI-RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 740
              K  +  I ++ +V    +T+  +    P S     V AFNG   GP SE  +F TPE
Sbjct: 857 SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGLGPASE-FTFSTPE 915

Query: 741 G 741
           G
Sbjct: 916 G 916



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 174/696 (25%), Positives = 265/696 (38%), Gaps = 94/696 (13%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI +G    +LI+ +V+ SD     CE  
Sbjct: 352  LDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRG----ALILSNVQPSDTMVTQCEAR 407

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + +   A +  T    CKA G P P + W+  +G 
Sbjct: 408  NRHGLLLANAY-IYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGT 466

Query: 165  PISQAP---PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q     P     +G     I +L+ +DTG Y C A N    V   +  N+ +  A +
Sbjct: 467  TVLQDERFFPYANGTLG-----IRDLQANDTGRYFCLAANDQNNV--TIVANLKVKDATQ 519

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWI---HNQKELTGGRYTILETGDLKIT 275
            IT+ P+      G  V  TC+    P  +P + W     + +EL       +E G L I 
Sbjct: 520  ITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITWRGDGRDLQELGDSDKYFIEDGRLVIH 579

Query: 276  DVAFADSGEYTCFARNKLGTAQGSGSLT-----------VKEHTHITDQPEDYEVEAGQS 324
             + ++D G Y+C A  +L   +    L            V    H+  Q +   V    S
Sbjct: 580  SLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQ---VRVSWS 636

Query: 325  ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF------VQSNDYSLTVTKSSELDSGQ 378
                 NA   P  K  I      E  D E  P        V  N  S T+  S  +    
Sbjct: 637  PAEDHNA---PIEKYDI------EFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYV---H 684

Query: 379  YTCRAQTELDFIEAQ---ATLTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSP 428
            YT R      +   +    + TV  P  AP        +D K         V++W P+  
Sbjct: 685  YTFRVTAINKYGPGEPSPVSETVVTPEAAPEK----NPVDVKGEGNETTNMVITWKPLRW 740

Query: 429  QSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
                     Y+VQ W  +   G  +E IV+      +    FVP      +V A N    
Sbjct: 741  MDWNAPQVQYRVQ-WRPQGTRGPWQEQIVSDPFLMVSNTSTFVPYE---IKVQAVNSQGK 796

Query: 489  GPPSEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QS 543
            GP  ++    + E  P  +  LE I  L SSA  +KW  V   Q  G L GY + Y  + 
Sbjct: 797  GPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGYNVTYWREG 856

Query: 544  VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF- 602
             +       + +   +    TTS  L+GL P + Y + +  +   G G  S++ F  P  
Sbjct: 857  SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGLGPASEFTFSTPEG 916

Query: 603  --KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ 660
               +P+ +     +  +L++ W   P + HN     Y + +  H   E        + R 
Sbjct: 917  VPGHPEALHLECQSNTSLLLRW--QPPLSHNGVLTGYVLSY--HPLDEGGKGQLSFNLRD 972

Query: 661  SELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
             EL   N     P   Y  ++  T  E  GE  +RE
Sbjct: 973  PELRTHNLTDLSPHLRYRFQLQATTKEGPGEAIVRE 1008



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 93/389 (23%), Positives = 161/389 (41%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS----QGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P + +     Q  +  S  I   + 
Sbjct: 43  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSFTITGNNS 102

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P      E E+V   C  
Sbjct: 103 NFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPV--EVEEGESVVLPCNP 160

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 161 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 218

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 219 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 278

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++  +   D GEY C A N LG+A+ +  +TV+   +   +
Sbjct: 279 PSGPMPADRVTYQNHNKTLQLLKLGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHK 338

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++  ++ +  +    +L ++    
Sbjct: 339 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQP 396

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A+     + A A +  VQ+P
Sbjct: 397 SDTMVTQCEARNRHGLLLANAYIYVVQLP 425



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 126/320 (39%), Gaps = 60/320 (18%)

Query: 122 VLAAPYFTVE-PEFINAAEEETVTFECKASGLPEPEIHWVHNG---KP-------ISQAP 170
           V+  P  T + P  +     + ++ +C+ASG PE +  W  +G   KP       + Q+P
Sbjct: 31  VMEPPVITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSP 90

Query: 171 PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEAPKDEY 229
            +    +  N     N  +   G Y C A+N LG         +   AP+   E  K   
Sbjct: 91  HSGSFTITGNN---SNFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVE 147

Query: 230 TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL---TGGRYTILETGDLKITDVAFADS-GEY 285
             +G++VVL C    + +P   +  N K L      R T+ + G+L   +V  +D+  +Y
Sbjct: 148 VEEGESVVLPCNPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDY 207

Query: 286 TCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA------------------------ 321
            C        A   G+ T+     I  +P D  V+A                        
Sbjct: 208 ICH-------AHFPGTRTI-----IQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVAL 255

Query: 322 -GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
            GQ     C A   P+   +I WLR S P+   ++    Q+++ +L + K  E D G+Y 
Sbjct: 256 QGQPLVLECIAEGFPT--PTIKWLRPSGPM--PADRVTYQNHNKTLQLLKLGEEDDGEYR 311

Query: 381 CRAQTELDFIEAQATLTVQV 400
           C A+  L        +TV+ 
Sbjct: 312 CLAENSLGSARHAYYVTVEA 331


>gi|4732113|gb|AAD28610.1|AF129167_1 neural cell adhesion molecule L1 [Chlorocebus aethiops]
          Length = 1248

 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 197/721 (27%), Positives = 302/721 (41%), Gaps = 80/721 (11%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L +  V   D G Y 
Sbjct: 248 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLKVGEEDDGEYR 306

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 307 CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 365

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N + SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 366 IPMEELAKDQKYRIQRGALILSNAQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 425

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 426 ADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLRAN 485

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N          L VK+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 486 DTGRYLCLAANDQNNVTIVAHLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPS 545

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 546 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 603

Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
                 VP    S+  L+      +  VSW+P    +       Y ++   ++       
Sbjct: 604 VGSPGPVPRLVLSDLHLLT---QSQVRVSWSPAEDHN--APIEKYDIEFEDKEMAPEKWY 658

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTV----- 507
            L    G  T+T + K  P      RV A N    G PS +  + VTPE  P        
Sbjct: 659 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVK 717

Query: 508 -QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
            +  E   +  +   L+W+    P    + Y+++++  +GT+ GP  E++  +SDP    
Sbjct: 718 GEGNETTNMVITWKPLRWMDWNAPQ---VQYRVQWRP-QGTR-GPWQEQI--VSDPFLVV 770

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
           +  +   P   Y I +      G G E +    + +   D  +              A+P
Sbjct: 771 SNTSTFVP---YEIKVQAVNSQGKGPEPQ--VTIGYSGEDYPQ--------------AIP 811

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVL-DWRQSELVLANQPTFQPYEIKVVQTWTE- 684
           E+E                  E  N   VL  WR  +L    +   + Y    V  W E 
Sbjct: 812 ELE----------------GIEILNSSAVLVKWRPVDLAQV-KGHLRGYN---VTYWREG 851

Query: 685 ---KDGEGSI-RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 740
              K  +  I ++ +V    +T+  +    P S     V AFNG   GP SE  +F TPE
Sbjct: 852 SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGLGPASE-FTFSTPE 910

Query: 741 G 741
           G
Sbjct: 911 G 911



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 174/695 (25%), Positives = 263/695 (37%), Gaps = 92/695 (13%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI +G    +LI+ + + SD     CE  
Sbjct: 347  LDCQVQGRPQPEVTWRINGIPMEELAKDQKYRIQRG----ALILSNAQPSDTMVTQCEAR 402

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + +   A +  T    CKA G P P + W+  +G 
Sbjct: 403  NRHGLLLANAY-IYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGT 461

Query: 165  PISQAP---PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
             + Q     P     +G     I +LR +DTG Y C A N    V    ++ V   A +I
Sbjct: 462  TVLQDERFFPYANGTLG-----IRDLRANDTGRYLCLAANDQNNVTIVAHLKV-KDATQI 515

Query: 222  TEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWI---HNQKELTGGRYTILETGDLKITD 276
            T+ P+      G  V  TC+    P  +P + W     + +EL       +E G L I  
Sbjct: 516  TQGPRSAIEKKGSRVTFTCQASFDPSLQPSITWRGDGRDLQELGDSDKYFIEDGRLVIHS 575

Query: 277  VAFADSGEYTCFARNKLGTAQGSGSLT-----------VKEHTHITDQPEDYEVEAGQSA 325
            + ++D G Y+C A  +L   +    L            V    H+  Q +   V    S 
Sbjct: 576  LDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQ---VRVSWSP 632

Query: 326  TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF------VQSNDYSLTVTKSSELDSGQY 379
                NA   P  K  I      E  D E  P        V  N  S T+  S  +    Y
Sbjct: 633  AEDHNA---PIEKYDI------EFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYV---HY 680

Query: 380  TCRAQTELDFIEAQ---ATLTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSPQ 429
            T R      +   +    + TV  P  AP        +D K         V++W P+   
Sbjct: 681  TFRVTAINKYGPGEPSPVSETVVTPEAAPEK----NPVDVKGEGNETTNMVITWKPLRWM 736

Query: 430  SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
                    Y+VQ W  +   G  +E IV+      +    FVP      +V A N    G
Sbjct: 737  DWNAPQVQYRVQ-WRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYE---IKVQAVNSQGKG 792

Query: 490  PPSEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QSV 544
            P  ++    + E  P  +  LE I  L SSA  +KW  V   Q  G L GY + Y  +  
Sbjct: 793  PEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGYNVTYWREGS 852

Query: 545  KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF-- 602
            +       + +   +    TTS  L+GL P + Y + +  +   G G  S++ F  P   
Sbjct: 853  QRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGLGPASEFTFSTPEGV 912

Query: 603  -KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQS 661
              +P+ +     +  +L++ W   P + HN     Y + +  H   E        + R  
Sbjct: 913  PGHPEALHLECQSNTSLLLRW--QPPLSHNGVLTGYVLSY--HPLDEGGKGQLSFNLRDP 968

Query: 662  ELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
            EL   N     P   Y  ++  T  E  GE  +RE
Sbjct: 969  ELRTHNLTDLSPHLRYRFQLQATTKEGPGEAIVRE 1003



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 162/389 (41%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS----QGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P + +     Q  +  S  I   + 
Sbjct: 38  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSFTITGNNS 97

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P      E E+V   C  
Sbjct: 98  NFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPV--EVEEGESVVLPCHP 155

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 156 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 213

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 214 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 273

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++  V   D GEY C A N LG+A+ +  +TV+   +   +
Sbjct: 274 PSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHK 333

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++  ++ +  +    +L ++ +  
Sbjct: 334 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPMEELAKDQKYRIQRGALILSNAQP 391

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A+     + A A +  VQ+P
Sbjct: 392 SDTMVTQCEARNRHGLLLANAYIYVVQLP 420


>gi|384942430|gb|AFI34820.1| neural cell adhesion molecule L1 isoform 3 precursor [Macaca
           mulatta]
 gi|387540646|gb|AFJ70950.1| neural cell adhesion molecule L1 isoform 3 precursor [Macaca
           mulatta]
          Length = 1248

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 197/721 (27%), Positives = 303/721 (42%), Gaps = 80/721 (11%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L +  V   D G Y 
Sbjct: 248 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLKVGEEDDGEYR 306

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 307 CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 365

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N + SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 366 IPMEELAKDQKYRIQRGALILSNAQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 425

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 426 ADNQTYVAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 485

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 486 DTGRYFCLAANDQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPS 545

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 546 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 603

Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
                 VP    S+  L+      +  VSW+P    +       Y ++   ++       
Sbjct: 604 VGSPGPVPRLVLSDLHLLT---QSQVRVSWSPAEDHN--APIEKYDIEFEDKEMAPEKWY 658

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTV----- 507
            L    G  T+T + K  P      RV A N    G PS +  + VTPE  P        
Sbjct: 659 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVK 717

Query: 508 -QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
            +  E   +  +   L+W+    P    + Y+++++  +GT+ GP  E++  +SDP    
Sbjct: 718 GEGNETTNMVITWKPLRWMDWNAPQ---VQYRVQWRP-QGTR-GPWQEQI--VSDPFLVV 770

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
           +  +   P   Y I +      G G E +    + +   D  +              A+P
Sbjct: 771 SNTSTFVP---YEIKVQAVNSQGKGPEPQ--VTIGYSGEDYPQ--------------AIP 811

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVL-DWRQSELVLANQPTFQPYEIKVVQTWTE- 684
           E+E                  E  N   VL  WR  +L    +   + Y    V  W E 
Sbjct: 812 ELE----------------GIEILNSSAVLVKWRPVDLAQV-KGHLRGYN---VTYWREG 851

Query: 685 ---KDGEGSI-RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 740
              K  +  I ++ +V    +T+  +    P S     V AFNG   GP SE  +F TPE
Sbjct: 852 SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGLGPASE-FTFSTPE 910

Query: 741 G 741
           G
Sbjct: 911 G 911



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 173/696 (24%), Positives = 264/696 (37%), Gaps = 94/696 (13%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI +G    +LI+ + + SD     CE  
Sbjct: 347  LDCQVQGRPQPEVTWRINGIPMEELAKDQKYRIQRG----ALILSNAQPSDTMVTQCEAR 402

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + +   A +  T    CKA G P P + W+  +G 
Sbjct: 403  NRHGLLLANAY-IYVVQLPAKILTADNQTYVAVQGSTAYLLCKAFGAPVPSVQWLDEDGT 461

Query: 165  PISQAP---PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q     P     +G     I +L+ +DTG Y C A N    V   +  N+ +  A +
Sbjct: 462  TVLQDERFFPYANGTLG-----IRDLQANDTGRYFCLAANDQNNV--TIVANLKVKDATQ 514

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWI---HNQKELTGGRYTILETGDLKIT 275
            IT+ P+      G  V  TC+    P  +P + W     + +EL       +E G L I 
Sbjct: 515  ITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITWRGDGRDLQELGDSDKYFIEDGRLVIH 574

Query: 276  DVAFADSGEYTCFARNKLGTAQGSGSLT-----------VKEHTHITDQPEDYEVEAGQS 324
             + ++D G Y+C A  +L   +    L            V    H+  Q +   V    S
Sbjct: 575  SLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQ---VRVSWS 631

Query: 325  ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF------VQSNDYSLTVTKSSELDSGQ 378
                 NA   P  K  I      E  D E  P        V  N  S T+  S  +    
Sbjct: 632  PAEDHNA---PIEKYDI------EFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYV---H 679

Query: 379  YTCRAQTELDFIEAQ---ATLTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSP 428
            YT R      +   +    + TV  P  AP        +D K         V++W P+  
Sbjct: 680  YTFRVTAINKYGPGEPSPVSETVVTPEAAPEK----NPVDVKGEGNETTNMVITWKPLRW 735

Query: 429  QSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
                     Y+VQ W  +   G  +E IV+      +    FVP      +V A N    
Sbjct: 736  MDWNAPQVQYRVQ-WRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYE---IKVQAVNSQGK 791

Query: 489  GPPSEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QS 543
            GP  ++    + E  P  +  LE I  L SSA  +KW  V   Q  G L GY + Y  + 
Sbjct: 792  GPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGYNVTYWREG 851

Query: 544  VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF- 602
             +       + +   +    TTS  L+GL P + Y + +  +   G G  S++ F  P  
Sbjct: 852  SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGLGPASEFTFSTPEG 911

Query: 603  --KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ 660
               +P+ +     +  +L++ W   P + HN     Y + +  H   E        + R 
Sbjct: 912  VPGHPEALHLECQSNTSLLLRW--QPPLSHNGVLTGYVLSY--HPLDEGGKGQLSFNLRD 967

Query: 661  SELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
             EL   N     P   Y  ++  T  E  GE  +RE
Sbjct: 968  PELRTHNLTDLSPHLRYRFQLQATTKEGPGEAIVRE 1003



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 162/389 (41%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS----QGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P + +     Q  +  S  I   + 
Sbjct: 38  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSFTITGNNS 97

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P      E E+V   C  
Sbjct: 98  NFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPV--EVEEGESVVLPCHP 155

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 156 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 213

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 214 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 273

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++  V   D GEY C A N LG+A+ +  +TV+   +   +
Sbjct: 274 PSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHK 333

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++  ++ +  +    +L ++ +  
Sbjct: 334 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPMEELAKDQKYRIQRGALILSNAQP 391

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A+     + A A +  VQ+P
Sbjct: 392 SDTMVTQCEARNRHGLLLANAYIYVVQLP 420


>gi|449481132|ref|XP_004177255.1| PREDICTED: LOW QUALITY PROTEIN: contactin-1 [Taeniopygia guttata]
          Length = 1050

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 191/739 (25%), Positives = 306/739 (41%), Gaps = 112/739 (15%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P+  WSK   P+  S  IS    G  L I 
Sbjct: 246 PADIKVKFKDTYALLGQNVTLECFALGNPVPELRWSKYLEPLPASAEISMS--GAVLKIF 303

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           ++++ D+G Y CE  N  G+ K +   + V AAP +    E IN  E +    + + C A
Sbjct: 304 NIQYEDEGLYECEAENYKGKDK-HQARVYVQAAPEWV---EHINDTERDIGSDLYWPCVA 359

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +             + +++L   D G Y C A N  G +Y +
Sbjct: 360 TGKPIPTIRWLKNGASFRKG-----------ELRMQSLTFDDAGMYQCIAENMHGIIYAN 408

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + ++A  P  E+    K      G  V++ C+   APKP+ +W    + L  G R  I
Sbjct: 409 AELKIVASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTELLVNGSRIRI 468

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            + G L+I +V   D G YTCFA N  G A  +G L + E T IT  P + +V  G++AT
Sbjct: 469 WDDGSLEIINVTKLDEGRYTCFAENNRGKANSTGVLEMTEATRITLAPLNVDVTVGENAT 528

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN-----DYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ +W      IDFE E    + N     +  L +       +G+Y C
Sbjct: 529 MQCIASHDPTLDLTFIWSLNGFVIDFEKEHEHYERNVMIKSNGELLIKNVQLRHAGRYMC 588

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGH 434
            AQT +D   A A L V+ P   P    + ++ D   A ++W       +P+S  +++  
Sbjct: 589 TAQTIVDNSSASADLVVRGPPGPPGGIRVEEIRDTAVA-LTWSRGTDNHSPISKYTIQS- 646

Query: 435 FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
            + +  + W +   + S  E     G   +  V   +P  +   R++A N    G PS  
Sbjct: 647 -KTFLSEEWKDAKTDPSDIE-----GNMESATVIDLIPWMEYEFRIIATNTLGTGEPSMP 700

Query: 495 ISFVTPEGVPGTVQSLEAIPLGSS--AFYLKW--VKPEQPNGVLMGYKIKYQSV------ 544
              +  EG P  V   +    G S     + W  +  E   G   GY + ++        
Sbjct: 701 SPRIRTEGAPPNVAPSDVGGGGGSNRELTITWMLLSREYHYGNNFGYIVAFKPFGEKEWR 760

Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFY---- 599
           + T   P + R  +         K   + PST+Y++ +  +   GDG  S   + Y    
Sbjct: 761 RVTXTNPEIGRYVH---------KDESMPPSTQYQVKVKAFNNKGDGPFSLTAVIYSAQD 811

Query: 600 VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
            P + P +V  +  + + + +SW                     H+  +           
Sbjct: 812 APTEIPTDVSVKVLSSSEMSVSW---------------------HHVSDK---------- 840

Query: 660 QSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 719
                     + + Y+I+    W   D E + + + V+  E  +T+++   P ++    V
Sbjct: 841 ----------SVEGYQIRY---WAAHDKEAAAQRVQVSNQE-YSTKLENLKPNTRYHVDV 886

Query: 720 LAFNGAYNGPPSEIISFVT 738
            AFN A  GPPS  I  VT
Sbjct: 887 SAFNSAGYGPPSSTIDVVT 905



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 132/322 (40%), Gaps = 41/322 (12%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVL-AAPYFTVEPEFINAA 138
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  +    V P  I   
Sbjct: 195 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPQSDRAKVYPADIKVK 252

Query: 139 EEET-------VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSD 191
            ++T       VT EC A G P PE+ W    +P+   P +    +    + I N++  D
Sbjct: 253 FKDTYALLGQNVTLECFALGNPVPELRWSKYLEPL---PASAEISMSGAVLKIFNIQYED 309

Query: 192 TGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVN 251
            G Y C A N  G       V V A APE  E   D     G  +   C   G P P + 
Sbjct: 310 EGLYECEAENYKGKDKHQARVYVQA-APEWVEHINDTERDIGSDLYWPCVATGKPIPTIR 368

Query: 252 WIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT 311
           W+ N              G+L++  + F D+G Y C A N  G    +  L       I 
Sbjct: 369 WLKNGAS--------FRKGELRMQSLTFDDAGMYQCIAENMHGIIYANAEL------KIV 414

Query: 312 DQPEDYEVE---------AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
             P  +E+           G      C   + P  K S  W +G+E +   S  R    +
Sbjct: 415 ASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTELLVNGSRIRIW--D 470

Query: 363 DYSLTVTKSSELDSGQYTCRAQ 384
           D SL +   ++LD G+YTC A+
Sbjct: 471 DGSLEIINVTKLDEGRYTCFAE 492



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 144/383 (37%), Gaps = 48/383 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           +V + C     P P   W  +   I+ + +R S    G  L+I + E S D G Y C VS
Sbjct: 66  QVSMNCRARAVPFPTYRWKLNNWDIDLTKERYSM--VGGRLVINNPEKSRDAGKYVCVVS 123

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--------W 159
           N  G  +S    LS      F  E  +     E  V     A  L EP  H        W
Sbjct: 124 NIFGTVRSSEATLSFGYLDPFPPEERY-----EVKVREGVGAVLLCEPPYHYPDDLSYRW 178

Query: 160 VHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAH 217
           + N  P+  A  + RR V      + I N+  SD GNY C  ++    + K V+   +  
Sbjct: 179 LLNEFPVFIA-LDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIPL 235

Query: 218 APEITEAP----------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            P+   A           KD Y + G+ V L C   G P PE+ W    + L       +
Sbjct: 236 IPQSDRAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELRWSKYLEPLPASAEISM 295

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               LKI ++ + D G Y C A N  G  +    + V+      +   D E + G    +
Sbjct: 296 SGAVLKIFNIQYEDEGLYECEAENYKGKDKHQARVYVQAAPEWVEHINDTERDIGSDLYW 355

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P    +I WL+      F      +QS  +          D+G Y C A+   
Sbjct: 356 PCVATGKPI--PTIRWLKNGA--SFRKGELRMQSLTFD---------DAGMYQCIAENMH 402

Query: 388 DFIEAQATLTVQVPLEAPSNFTL 410
             I A A L +   + +P  F L
Sbjct: 403 GIIYANAELKI---VASPPTFEL 422



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 138/642 (21%), Positives = 242/642 (37%), Gaps = 102/642 (15%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C+  G P+P   W K+G      +          L ++ + F D G Y C   N  G   
Sbjct: 357 CVATGKPIPTIRWLKNGASFRKGE----------LRMQSLTFDDAGMYQCIAENMHGIIY 406

Query: 115 SYSIDLSVLAAP-YFTVEP--EFINAAEEETVTFECKASGLPEPEIHW------VHNGKP 165
           + + +L ++A+P  F + P  + I AA+   V  ECK    P+P+  W      + NG  
Sbjct: 407 A-NAELKIVASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTELLVNGSR 465

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           I        R      + I N+ K D G Y C A N+ G       V  +  A  IT AP
Sbjct: 466 I--------RIWDDGSLEIINVTKLDEGRYTCFAENNRGKA-NSTGVLEMTEATRITLAP 516

Query: 226 KDEYTVDGKTVVLTCRVFGAPKPEVNWI----------HNQKELTGGRYTILETGDLKIT 275
            +     G+   + C     P  ++ +I            + E       I   G+L I 
Sbjct: 517 LNVDVTVGENATMQCIASHDPTLDLTFIWSLNGFVIDFEKEHEHYERNVMIKSNGELLIK 576

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           +V    +G Y C A+  +  +  S  L V+                G     R   + D 
Sbjct: 577 NVQLRHAGRYMCTAQTIVDNSSASADLVVRG-------------PPGPPGGIRVEEIRDT 623

Query: 336 SLKLSIVWLRGSE---PI----------------DFESEPRFVQSNDYSLTVTKSSELDS 376
           ++ L+  W RG++   PI                D +++P  ++ N  S TV        
Sbjct: 624 AVALT--WSRGTDNHSPISKYTIQSKTFLSEEWKDAKTDPSDIEGNMESATVIDLIPWME 681

Query: 377 GQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDA----KKAVVSWNPVSPQSLR 432
            ++   A   L   E            AP N     V       ++  ++W  +S +   
Sbjct: 682 YEFRIIATNTLGTGEPSMPSPRIRTEGAPPNVAPSDVGGGGGSNRELTITWMLLSREYHY 741

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFV-------PASKNFARVLAFNG 485
           G+  GY V    +  GE   R +       T  E+ ++V       P+++   +V AFN 
Sbjct: 742 GNNFGYIVAF--KPFGEKEWRRVT-----XTNPEIGRYVHKDESMPPSTQYQVKVKAFNN 794

Query: 486 AYNGPPSEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
             +GP S      + +  P  + +  ++  L SS   + W      +  + GY+I+Y + 
Sbjct: 795 KGDGPFSLTAVIYSAQDAPTEIPTDVSVKVLSSSEMSVSW--HHVSDKSVEGYQIRYWAA 852

Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKN 604
              +     +R+   +   +T  KL  L+P+T+Y + ++ +  AG G  S  +  V  K 
Sbjct: 853 HDKEAAA--QRVQVSNQEYST--KLENLKPNTRYHVDVSAFNSAGYGPPSSTIDVVTRKA 908

Query: 605 PDNVEGR----GSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           P +   R      + +  +I+W  +  + + +    Y++ +R
Sbjct: 909 PPSQRPRIISSVRSGSRYIITWDHVKAMSNESAVEGYKVLYR 950



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 111/297 (37%), Gaps = 31/297 (10%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + +  V+  C+A  +P P   W  N   I       R  +   R+ I 
Sbjct: 53  PIDTIYPE---ESSDGQVSMNCRARAVPFPTYRWKLNNWDIDLT--KERYSMVGGRLVIN 107

Query: 186 NLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV---DGKTVVLTCR 241
           N  KS D G Y C  +N  G V          +       P++ Y V   +G   VL C 
Sbjct: 108 NPEKSRDAGKYVCVVSNIFGTVRSSEATLSFGYLDPF--PPEERYEVKVREGVGAVLLCE 165

Query: 242 V-FGAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGT 295
             +  P      W+ N+      L   R+     G+L I +V  +D G Y+CF  +   T
Sbjct: 166 PPYHYPDDLSYRWLLNEFPVFIALDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSIT 225

Query: 296 AQGSGSLT--VKEHTHITDQPEDYEVE-------AGQSATFRCNAVSDPSLKLSIVWLRG 346
                     + +       P D +V+        GQ+ T  C A+ +P  +L   W + 
Sbjct: 226 KSVFSKFIPLIPQSDRAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELR--WSKY 283

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE 403
            EP+   +E   +  +   L +      D G Y C A+      + QA + VQ   E
Sbjct: 284 LEPLPASAE---ISMSGAVLKIFNIQYEDEGLYECEAENYKGKDKHQARVYVQAAPE 337


>gi|41054217|ref|NP_956098.1| contactin-5 [Danio rerio]
 gi|55976499|sp|Q7ZW34.1|CNTN5_DANRE RecName: Full=Contactin-5; Flags: Precursor
 gi|28279510|gb|AAH45307.1| Zgc:55318 [Danio rerio]
          Length = 1056

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 165/604 (27%), Positives = 263/604 (43%), Gaps = 45/604 (7%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGS 101
           +A +   V L C   G P+P   W K    +P     R SQ      L I +++  D GS
Sbjct: 269 LAAKGVTVRLECFALGNPVPTITWRKMSGNIPKKARLRKSQA----VLEIPNIQLEDSGS 324

Query: 102 YTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVH 161
           Y C+  N  G   ++   L V   P +            E + +EC+A+G P P   W+ 
Sbjct: 325 YECKAENTRG-GTAFRGHLQVYTLPQWISMINDTQLDSGEQLRWECRATGKPRPTYRWLR 383

Query: 162 NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           NG+P+S      R ++    +TI  L+++D+G Y C A N  G +Y    + +LA AP  
Sbjct: 384 NGEPLST---QSRVEMVNGELTIHRLQQADSGMYQCIAENKYGAIYSSAELKILASAPMF 440

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
              P       GK V L CR   +PKP ++W  N + L    R  +L    L+I + + +
Sbjct: 441 NNNPVRLIATVGKDVSLECRPRASPKPRISWRKNDRRLQPSRRIMLLRNNTLRIINSSRS 500

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D G Y C A N+ G+A+ +  L VKE   +   P   EV  G+S    C    DPSL +S
Sbjct: 501 DEGSYVCRAENQFGSAELTTVLLVKEPMRVELSPLRVEVTVGESVVLSCKVTHDPSLDVS 560

Query: 341 IVWLRGSEPIDFESEP---RFVQSNDYSLTVTKSSEL--DSGQYTCRAQTELDFIEAQAT 395
            +WL  ++P++ + +     ++Q+   +  +   S L   +G+Y CRAQT  D + A+A 
Sbjct: 561 FLWLLNNQPLNTQQDGGHFEYIQTQSSTADLMIRSILLKHAGKYGCRAQTSTDSVLAEAE 620

Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKD-GEGSI 452
           L V+ P   P    +++ I A  A +SW+      +  H     Y VQ  +    G  ++
Sbjct: 621 LLVRGP-PGPPGVVIVEEITASTATLSWS----HGVDNHSPITTYNVQARSPVSLGWQTV 675

Query: 453 R---ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG---PPSEIISFVTPEGVPGT 506
           +   + +    ES    VD   P  +   RV+A N    G   PPS  +   T E VP  
Sbjct: 676 KTDPDPVTGSMESAMA-VD-LNPWVEYEFRVVATNSIGTGDPSPPSRAVR--TKEAVPSV 731

Query: 507 V-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
              ++           + W  V  E  NG   GY + ++ V GT+     E++   +D T
Sbjct: 732 APANVRGGNGRRHELVISWEPVSEEYQNGEGFGYIVAFR-VNGTR--GWKEKMVTSADST 788

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNL 618
           T   +     P T + + +  Y   GDG  S+ +        P + P  V+    + + +
Sbjct: 789 TYKYRDETFPPLTPFEVRVGVYNNKGDGPFSEVVTVFSAEGEPREPPSEVQAFAVSSSEI 848

Query: 619 VISW 622
            + W
Sbjct: 849 KVLW 852



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 166/693 (23%), Positives = 260/693 (37%), Gaps = 106/693 (15%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS----IDL---SVLAAPYFTVE---PEFINA 137
           +L I  V+ SD GSY C+V N V  A+  S    + L    V+      +E   P+ + A
Sbjct: 211 NLYIPKVQPSDVGSYVCQVKNTVTNARVLSPPTPLTLKTDGVMGEYEPKIEAHFPQTVLA 270

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           A+  TV  EC A G P P I W    K     P   R +     + I N++  D+G+Y C
Sbjct: 271 AKGVTVRLECFALGNPVPTITW---RKMSGNIPKKARLRKSQAVLEIPNIQLEDSGSYEC 327

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK 257
            A N+ G      ++ V    P+      D     G+ +   CR  G P+P   W+ N +
Sbjct: 328 KAENTRGGTAFRGHLQVYT-LPQWISMINDTQLDSGEQLRWECRATGKPRPTYRWLRNGE 386

Query: 258 ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI-TDQPED 316
            L+      +  G+L I  +  ADSG Y C A NK G    S  L +     +  + P  
Sbjct: 387 PLSTQSRVEMVNGELTIHRLQQADSGMYQCIAENKYGAIYSSAELKILASAPMFNNNPVR 446

Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
                G+  +  C   + P  ++S  W +    +        +++N  +L +  SS  D 
Sbjct: 447 LIATVGKDVSLECRPRASPKPRIS--WRKNDRRLQPSRRIMLLRNN--TLRIINSSRSDE 502

Query: 377 GQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVS-------------- 422
           G Y CRA+ +    E    L V+ P+    +   ++V   +  V+S              
Sbjct: 503 GSYVCRAENQFGSAELTTVLLVKEPMRVELSPLRVEVTVGESVVLSCKVTHDPSLDVSFL 562

Query: 423 W----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK----GESTTTEVDKFVPAS 474
           W     P++ Q   GHF   + Q+ T    +  IR +++      G    T  D  +  +
Sbjct: 563 WLLNNQPLNTQQDGGHFEYIQTQSST---ADLMIRSILLKHAGKYGCRAQTSTDSVLAEA 619

Query: 475 KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
           +   R         GPP          G PG V   E   + +S   L W      +  +
Sbjct: 620 ELLVR---------GPP----------GPPGVVIVEE---ITASTATLSWSHGVDNHSPI 657

Query: 535 MGYKIKYQSVKGTKVGPLLERLPYISDPTT---TSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             Y ++ +S     V    + +    DP T    SA    L P  +Y   +      G G
Sbjct: 658 TTYNVQARS----PVSLGWQTVKTDPDPVTGSMESAMAVDLNPWVEYEFRVVATNSIGTG 713

Query: 592 AES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
             S      +    VP   P NV G     + LVISW  + E   N   F Y + +R + 
Sbjct: 714 DPSPPSRAVRTKEAVPSVAPANVRGGNGRRHELVISWEPVSEEYQNGEGFGYIVAFRVNG 773

Query: 646 TGEAWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTT 703
           T   W +  V     +     ++  P   P+E++V               +  NKG+   
Sbjct: 774 T-RGWKEKMVTSADSTTYKYRDETFPPLTPFEVRV--------------GVYNNKGDGPF 818

Query: 704 TEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 736
           +EV            V +  G    PPSE+ +F
Sbjct: 819 SEV----------VTVFSAEGEPREPPSEVQAF 841



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 165/659 (25%), Positives = 273/659 (41%), Gaps = 114/659 (17%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P++   R+   N    L I  ++ +D G Y C   N  G   
Sbjct: 369 CRATGKPRPTYRWLRNGEPLSTQSRVEMVN--GELTIHRLQQADSGMYQCIAENKYGAIY 426

Query: 115 SYSIDLSVLA-APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           S S +L +LA AP F   P  + A   + V+ EC+    P+P I W  N + +      P
Sbjct: 427 S-SAELKILASAPMFNNNPVRLIATVGKDVSLECRPRASPKPRISWRKNDRRL-----QP 480

Query: 174 RRKV---GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE-APKDEY 229
            R++     N + I N  +SD G+Y C A N  G    ++   +L   P   E +P    
Sbjct: 481 SRRIMLLRNNTLRIINSSRSDEGSYVCRAENQFGSA--ELTTVLLVKEPMRVELSPLRVE 538

Query: 230 TVDGKTVVLTCRVFGAPKPEVN--WIHNQKELT----GGRYTILET----GDLKITDVAF 279
              G++VVL+C+V   P  +V+  W+ N + L     GG +  ++T     DL I  +  
Sbjct: 539 VTVGESVVLSCKVTHDPSLDVSFLWLLNNQPLNTQQDGGHFEYIQTQSSTADLMIRSILL 598

Query: 280 ADSGEYTCFARNK----------------------------LGTAQGSGSLTVKEHTHIT 311
             +G+Y C A+                                TA  S S  V  H+ IT
Sbjct: 599 KHAGKYGCRAQTSTDSVLAEAELLVRGPPGPPGVVIVEEITASTATLSWSHGVDNHSPIT 658

Query: 312 DQPEDYEVEAGQSATFRCNAV-SDPSLKLSIVWLRGSEPIDFESEPRF-VQSN---DYSL 366
                Y V+A    +     V +DP            +P+    E    V  N   +Y  
Sbjct: 659 T----YNVQARSPVSLGWQTVKTDP------------DPVTGSMESAMAVDLNPWVEYEF 702

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-VPLEAPSNFTLIQVIDAKK--AVVSW 423
            V  ++ + +G  +           ++A  T + VP  AP+N   ++  + ++   V+SW
Sbjct: 703 RVVATNSIGTGDPSP---------PSRAVRTKEAVPSVAPAN---VRGGNGRRHELVISW 750

Query: 424 NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEV--DKFVPASKNFARVL 481
            PVS +   G   GY V      +G    +E +V   +STT +   + F P +    RV 
Sbjct: 751 EPVSEEYQNGEGFGYIVAF--RVNGTRGWKEKMVTSADSTTYKYRDETFPPLTPFEVRVG 808

Query: 482 AFNGAYNGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
            +N   +GP SE+++  + EG P    S ++A  + SS   + W  P    G   GY++ 
Sbjct: 809 VYNNKGDGPFSEVVTVFSAEGEPREPPSEVQAFAVSSSEIKVLWKPPSPGLGRPQGYEVS 868

Query: 541 Y-QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY 599
           + + V+  ++G     L        T+  L+GL+ +T+Y + + G+  AG G  S  +  
Sbjct: 869 FWKDVEQEELGKKKRTLG-----NETNMLLSGLDGNTQYLVSVKGFNSAGQGPSSTAVKI 923

Query: 600 VPFKN-----PDNV----EGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEA 649
              KN     P N+    EG     NN+ +SW  +   ++ +    Y++  R+   G +
Sbjct: 924 STKKNAPSLPPGNLMWIQEG-----NNVSLSWDPVKARDNESEVIGYKVLLRQEGRGHS 977



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 139/372 (37%), Gaps = 33/372 (8%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEV 106
           +KK+ + C   G P+P   W  +G  ++            +LII +  E  D G Y C  
Sbjct: 74  DKKIIMNCEARGNPVPTYSWLINGTNVDTEADFRYSLIDGNLIIHNASEVIDYGRYQCRA 133

Query: 107 SNGVGEAKSYSIDLS-VLAAPYFTVEPEFINAAEEETVTFECK-ASGLPEPEIHWVHNGK 164
            N +G   S    L      P+       ++  E + V   C   S  PE    WV N  
Sbjct: 134 ENSIGIVLSRDALLQFAYLGPFSGKTRGAVSVREGQGVVLMCAPPSHSPEIIYSWVFNEL 193

Query: 165 PISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------V 206
           P S    + RR +      + I  ++ SD G+Y C   N++                  V
Sbjct: 194 P-SFVAEDSRRFISQETGNLYIPKVQPSDVGSYVCQVKNTVTNARVLSPPTPLTLKTDGV 252

Query: 207 YKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
             +    + AH P+   A K      G TV L C   G P P + W      +       
Sbjct: 253 MGEYEPKIEAHFPQTVLAAK------GVTVRLECFALGNPVPTITWRKMSGNIPKKARLR 306

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
                L+I ++   DSG Y C A N  G     G L V           D ++++G+   
Sbjct: 307 KSQAVLEIPNIQLEDSGSYECKAENTRGGTAFRGHLQVYTLPQWISMINDTQLDSGEQLR 366

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + C A   P  + +  WLR  EP+  +S    V      LT+ +  + DSG Y C A+ +
Sbjct: 367 WECRATGKP--RPTYRWLRNGEPLSTQSRVEMVNGE---LTIHRLQQADSGMYQCIAENK 421

Query: 387 LDFIEAQATLTV 398
              I + A L +
Sbjct: 422 YGAIYSSAELKI 433



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 114/284 (40%), Gaps = 33/284 (11%)

Query: 125 APYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P F  EP+   F   ++++ +   C+A G P P   W+ NG  +          +  N 
Sbjct: 56  GPVFIQEPDDAIFSLDSDDKKIIMNCEARGNPVPTYSWLINGTNVDTEADFRYSLIDGNL 115

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTC 240
           I        D G Y C A NS+G V     +   A+    +   +   +V +G+ VVL C
Sbjct: 116 IIHNASEVIDYGRYQCRAENSIGIVLSRDALLQFAYLGPFSGKTRGAVSVREGQGVVLMC 175

Query: 241 RVFGAP---KPEV--NWIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCFARN 291
               AP    PE+  +W+ N+          R+   ETG+L I  V  +D G Y C  +N
Sbjct: 176 ----APPSHSPEIIYSWVFNELPSFVAEDSRRFISQETGNLYIPKVQPSDVGSYVCQVKN 231

Query: 292 KLGTAQGSG---SLTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSLKLS 340
            +  A+       LT+K    + +         P+      G +    C A+ +P    +
Sbjct: 232 TVTNARVLSPPTPLTLKTDGVMGEYEPKIEAHFPQTVLAAKGVTVRLECFALGNPV--PT 289

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           I W + S  I  ++  R  Q+    L +      DSG Y C+A+
Sbjct: 290 ITWRKMSGNIPKKARLRKSQA---VLEIPNIQLEDSGSYECKAE 330


>gi|161611605|gb|AAI55825.1| Zgc:55318 protein [Danio rerio]
          Length = 804

 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 165/604 (27%), Positives = 263/604 (43%), Gaps = 45/604 (7%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGS 101
           +A +   V L C   G P+P   W K    +P     R SQ      L I +++  D GS
Sbjct: 17  LAAKGVTVRLECFALGNPVPTITWRKMSGNIPKKARLRKSQA----VLEIPNIQLEDSGS 72

Query: 102 YTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVH 161
           Y C+  N  G   ++   L V   P +            E + +EC+A+G P P   W+ 
Sbjct: 73  YECKAENTRG-GTAFRGHLQVYTLPQWISMINDTQLDSGEQLRWECRATGKPRPTYRWLR 131

Query: 162 NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           NG+P+S      R ++    +TI  L+++D+G Y C A N  G +Y    + +LA AP  
Sbjct: 132 NGEPLST---QSRVEMVNGELTIHRLQQADSGMYQCIAENKYGAIYSSAELKILASAPMF 188

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
              P       GK V L CR   +PKP ++W  N + L    R  +L    L+I + + +
Sbjct: 189 NNNPVRLIATVGKDVSLECRPRASPKPRISWRKNDRRLQPSRRIMLLRNNTLRIINSSRS 248

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D G Y C A N+ G+A+ +  L VKE   +   P   EV  G+S    C    DPSL +S
Sbjct: 249 DEGSYVCRAENQFGSAELTTVLLVKEPMRVELSPLRVEVTVGESVVLSCKVTHDPSLDVS 308

Query: 341 IVWLRGSEPIDFESEP---RFVQSNDYSLTVTKSSEL--DSGQYTCRAQTELDFIEAQAT 395
            +WL  ++P++ + +     ++Q+   +  +   S L   +G+Y CRAQT  D + A+A 
Sbjct: 309 FLWLLNNQPLNTQQDGGHFEYIQTQSSTADLMIRSILLKHAGKYGCRAQTSADSVLAEAE 368

Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKD-GEGSI 452
           L V+ P   P    +++ I A  A +SW+      +  H     Y VQ  +    G  ++
Sbjct: 369 LLVRGP-PGPPGVVIVEEITASTATLSWS----HGVDNHSPITTYNVQARSPVSLGWQTV 423

Query: 453 R---ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG---PPSEIISFVTPEGVPGT 506
           +   + +    ES    VD   P  +   RV+A N    G   PPS  +   T E VP  
Sbjct: 424 KTDPDPVTGSMESAMA-VD-LNPWVEYEFRVVATNSIGTGDPSPPSRAVR--TKEAVPSV 479

Query: 507 V-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
              ++           + W  V  E  NG   GY + ++ V GT+     E++   +D T
Sbjct: 480 APANVRGGNGRRHELVISWEPVSEEYQNGEGFGYIVAFR-VNGTR--GWKEKMVTSADST 536

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNL 618
           T   +     P T + + +  Y   GDG  S+ +        P + P  V+    + + +
Sbjct: 537 TYKYRDETFPPLTPFEVRVGVYNNKGDGPFSEVVTVFSAEGEPREPPSEVQAFAVSSSEI 596

Query: 619 VISW 622
            + W
Sbjct: 597 KVLW 600



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 156/635 (24%), Positives = 271/635 (42%), Gaps = 66/635 (10%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P++   R+   N    L I  ++ +D G Y C   N  G   
Sbjct: 117 CRATGKPRPTYRWLRNGEPLSTQSRVEMVN--GELTIHRLQQADSGMYQCIAENKYGAIY 174

Query: 115 SYSIDLSVLA-APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           S S +L +LA AP F   P  + A   + V+ EC+    P+P I W  N + +      P
Sbjct: 175 S-SAELKILASAPMFNNNPVRLIATVGKDVSLECRPRASPKPRISWRKNDRRL-----QP 228

Query: 174 RRKV---GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE-APKDEY 229
            R++     N + I N  +SD G+Y C A N  G    ++   +L   P   E +P    
Sbjct: 229 SRRIMLLRNNTLRIINSSRSDEGSYVCRAENQFGSA--ELTTVLLVKEPMRVELSPLRVE 286

Query: 230 TVDGKTVVLTCRVFGAPKPEVN--WIHNQKELT----GGRYTILET----GDLKITDVAF 279
              G++VVL+C+V   P  +V+  W+ N + L     GG +  ++T     DL I  +  
Sbjct: 287 VTVGESVVLSCKVTHDPSLDVSFLWLLNNQPLNTQQDGGHFEYIQTQSSTADLMIRSILL 346

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
             +G+Y C A+    +      L V+            E+ A  +AT   +   D    +
Sbjct: 347 KHAGKYGCRAQTSADSVLAEAELLVRGPPGPPGVVIVEEITA-STATLSWSHGVDNHSPI 405

Query: 340 SIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE--- 391
           +   ++   P+       +++P  V  +  S      +     ++   A   +   +   
Sbjct: 406 TTYNVQARSPVSLGWQTVKTDPDPVTGSMESAMAVDLNPWVEYEFRVVATNSIGTGDPSP 465

Query: 392 -AQATLTVQ-VPLEAPSNFTLIQVIDAKK--AVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
            ++A  T + VP  AP+N   ++  + ++   V+SW PVS +   G   GY V      +
Sbjct: 466 PSRAVRTKEAVPSVAPAN---VRGGNGRRHELVISWEPVSEEYQNGEGFGYIVAF--RVN 520

Query: 448 GEGSIRELIVNKGESTTTEV--DKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPG 505
           G    +E +V   +STT +   + F P +    RV  +N   +GP SE+++  + EG P 
Sbjct: 521 GTRGWKEKMVTSADSTTYKYRDETFPPLTPFEVRVGVYNNKGDGPFSEVVTVFSAEGEPR 580

Query: 506 TVQS-LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY-QSVKGTKVGPLLERLPYISDPT 563
              S ++A  + SS   + W  P    G   GY++ + + V+  ++G     L       
Sbjct: 581 EPPSEVQAFAVSSSEIKVLWKPPSPGLGRPQGYEVSFWKDVEQEELGKKKRTLG-----N 635

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKN-----PDNV----EGRGST 614
            T+  L+GL+ +T+Y + + G+  AG G  S  +     KN     P N+    EG    
Sbjct: 636 ETNMLLSGLDGNTQYLVSVKGFNSAGQGPSSTAVKISTKKNAPSLPPGNLMWIQEG---- 691

Query: 615 PNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEA 649
            NN+ +SW  +   ++ +    Y++  R+   G +
Sbjct: 692 -NNVSLSWDPVKARDNESEVIGYKVLLRQEGRGHS 725



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 149/639 (23%), Positives = 235/639 (36%), Gaps = 96/639 (15%)

Query: 132 PEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSD 191
           P+ + AA+  TV  EC A G P P I W      I   P   R +     + I N++  D
Sbjct: 13  PQTVLAAKGVTVRLECFALGNPVPTITWRKMSGNI---PKKARLRKSQAVLEIPNIQLED 69

Query: 192 TGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVN 251
           +G+Y C A N+ G      ++ V    P+      D     G+ +   CR  G P+P   
Sbjct: 70  SGSYECKAENTRGGTAFRGHLQVYT-LPQWISMINDTQLDSGEQLRWECRATGKPRPTYR 128

Query: 252 WIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI- 310
           W+ N + L+      +  G+L I  +  ADSG Y C A NK G    S  L +     + 
Sbjct: 129 WLRNGEPLSTQSRVEMVNGELTIHRLQQADSGMYQCIAENKYGAIYSSAELKILASAPMF 188

Query: 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTK 370
            + P       G+  +  C   + P  ++S  W +       +   R +   + +L +  
Sbjct: 189 NNNPVRLIATVGKDVSLECRPRASPKPRIS--WRKNDR--RLQPSRRIMLLRNNTLRIIN 244

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVS-------- 422
           SS  D G Y CRA+ +    E    L V+ P+    +   ++V   +  V+S        
Sbjct: 245 SSRSDEGSYVCRAENQFGSAELTTVLLVKEPMRVELSPLRVEVTVGESVVLSCKVTHDPS 304

Query: 423 ------W----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK----GESTTTEVD 468
                 W     P++ Q   GHF   + Q+ T    +  IR +++      G    T  D
Sbjct: 305 LDVSFLWLLNNQPLNTQQDGGHFEYIQTQSST---ADLMIRSILLKHAGKYGCRAQTSAD 361

Query: 469 KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPE 528
             +  ++   R         GPP          G PG V   E   + +S   L W    
Sbjct: 362 SVLAEAELLVR---------GPP----------GPPGVVIVEE---ITASTATLSWSHGV 399

Query: 529 QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT---TSAKLAGLEPSTKYRIHLAGY 585
             +  +  Y ++ +S     V    + +    DP T    SA    L P  +Y   +   
Sbjct: 400 DNHSPITTYNVQARS----PVSLGWQTVKTDPDPVTGSMESAMAVDLNPWVEYEFRVVAT 455

Query: 586 TKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI 639
              G G  S      +    VP   P NV G     + LVISW  + E   N   F Y +
Sbjct: 456 NSIGTGDPSPPSRAVRTKEAVPSVAPANVRGGNGRRHELVISWEPVSEEYQNGEGFGYIV 515

Query: 640 FWRRHNTGEAWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIVN 697
            +R + T   W +  V     +     ++  P   P+E++V               +  N
Sbjct: 516 AFRVNGT-RGWKEKMVTSADSTTYKYRDETFPPLTPFEVRV--------------GVYNN 560

Query: 698 KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 736
           KG+   +EV            V +  G    PPSE+ +F
Sbjct: 561 KGDGPFSEV----------VTVFSAEGEPREPPSEVQAF 589


>gi|281183300|ref|NP_001162516.1| neural cell adhesion molecule L1 [Papio anubis]
 gi|160213446|gb|ABX10974.1| L1 cell adhesion molecule, isoform 1 (predicted) [Papio anubis]
          Length = 1324

 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 197/721 (27%), Positives = 303/721 (42%), Gaps = 80/721 (11%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L +  V   D G Y 
Sbjct: 320 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLKVGEEDDGEYR 378

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 379 CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 437

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N + SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 438 IPMEELAKDQKYRIQRGALILSNAQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 497

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 498 ADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 557

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 558 DTGRYFCLAANDQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPS 617

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 618 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 675

Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
                 VP    S+  L+      +  VSW+P   +        Y ++   ++       
Sbjct: 676 VGSPGPVPRLVLSDLHLLT---QSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWY 730

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTV----- 507
            L    G  T+T + K  P      RV A N    G PS +  + VTPE  P        
Sbjct: 731 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVK 789

Query: 508 -QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
            +  E   +  +   L+W+    P    + Y+++++  +GT+ GP  E++  +SDP    
Sbjct: 790 GEGNETTNMVITWKPLRWMDWNAPQ---VQYRVQWRP-QGTR-GPWQEQI--VSDPFLVV 842

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
           +  +   P   Y I +      G G E +    + +   D  +              A+P
Sbjct: 843 SNTSTFVP---YEIKVQAVNSQGKGPEPQ--VTIGYSGEDYPQ--------------AIP 883

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVL-DWRQSELVLANQPTFQPYEIKVVQTWTE- 684
           E+E                  E  N   VL  WR  +L    +   + Y    V  W E 
Sbjct: 884 ELEGI----------------EILNSSAVLVKWRPVDLAQV-KGHLRGYN---VTYWREG 923

Query: 685 ---KDGEGSI-RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 740
              K  +  I ++ +V    +T+  +    P S     V AFNG   GP SE  +F TPE
Sbjct: 924 SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGLGPASE-FTFSTPE 982

Query: 741 G 741
           G
Sbjct: 983 G 983



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 173/698 (24%), Positives = 263/698 (37%), Gaps = 94/698 (13%)

Query: 51   VELFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
              L C   G P P+  W  +G+P+     +   RI +G    +LI+ + + SD     CE
Sbjct: 417  ARLDCQVQGRPQPEVTWRINGIPMEELAKDQKYRIQRG----ALILSNAQPSDTMVTQCE 472

Query: 106  VSN--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HN 162
              N  G+  A +Y I +  L A   T + +   A +  T    CKA G P P + W+  +
Sbjct: 473  ARNRHGLLLANAY-IYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDED 531

Query: 163  GKPISQAPPNPRRKVGP---NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHA 218
            G  + Q       +  P     + I +L+ +DTG Y C A N    V   +  N+ +  A
Sbjct: 532  GTTVLQ-----DERFFPYANGTLGIRDLQANDTGRYFCLAANDQNNV--TIVANLKVKDA 584

Query: 219  PEITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWI---HNQKELTGGRYTILETGDLK 273
             +IT+ P+      G  V  TC+    P  +P + W     + +EL       +E G L 
Sbjct: 585  TQITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITWRGDGRDLQELGDSDKYFIEDGRLV 644

Query: 274  ITDVAFADSGEYTCFARNKLGTAQGSGSLT-----------VKEHTHITDQPEDYEVEAG 322
            I  + ++D G Y+C A  +L   +    L            V    H+  Q +   V   
Sbjct: 645  IHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQ---VRVS 701

Query: 323  QSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF------VQSNDYSLTVTKSSELDS 376
             S     NA   P  K  I      E  D E  P        V  N  S T+  S  +  
Sbjct: 702  WSPAEDHNA---PIEKYDI------EFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYV-- 750

Query: 377  GQYTCRAQTELDFIEAQ---ATLTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPV 426
              YT R      +   +    + TV  P  AP        +D K         V++W P+
Sbjct: 751  -HYTFRVTAINKYGPGEPSPVSETVVTPEAAPEK----NPVDVKGEGNETTNMVITWKPL 805

Query: 427  SPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
                       Y+VQ W  +   G  +E IV+      +    FVP      +V A N  
Sbjct: 806  RWMDWNAPQVQYRVQ-WRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYE---IKVQAVNSQ 861

Query: 487  YNGPPSEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY-- 541
              GP  ++    + E  P  +  LE I  L SSA  +KW  V   Q  G L GY + Y  
Sbjct: 862  GKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGYNVTYWR 921

Query: 542  QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVP 601
            +  +       + +   +    TTS  L+GL P + Y + +  +   G G  S++ F  P
Sbjct: 922  EGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGLGPASEFTFSTP 981

Query: 602  FKNPDNVEG---RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDW 658
               P + E       +  +L++ W   P + HN     Y + +  H   E        + 
Sbjct: 982  EGVPGHPEALHLECQSNTSLLLRW--QPPLSHNGVLTGYVLSY--HPLDEGGKGQLSFNL 1037

Query: 659  RQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
            R  EL   N     P   Y  ++  T  E  GE  +RE
Sbjct: 1038 RDPELRTHNLTDLSPHLRYRFQLQATTKEGPGEAIVRE 1075



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 162/389 (41%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS----QGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P + +     Q  +  S  I   + 
Sbjct: 110 RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSFTITGNNS 169

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P      E E+V   C  
Sbjct: 170 NFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPV--EVEEGESVVLPCHP 227

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNA--TNSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 228 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 285

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 286 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 345

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++  V   D GEY C A N LG+A+ +  +TV+   +   +
Sbjct: 346 PSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHK 405

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++  ++ +  +    +L ++ +  
Sbjct: 406 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPMEELAKDQKYRIQRGALILSNAQP 463

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A+     + A A +  VQ+P
Sbjct: 464 SDTMVTQCEARNRHGLLLANAYIYVVQLP 492



 Score = 45.8 bits (107), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 126/320 (39%), Gaps = 60/320 (18%)

Query: 122 VLAAPYFTVE-PEFINAAEEETVTFECKASGLPEPEIHWVHNG---KP-------ISQAP 170
           V+  P  T + P  +     + ++ +C+ASG PE +  W  +G   KP       + Q+P
Sbjct: 98  VMEPPVITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSP 157

Query: 171 PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEAPKDEY 229
            +    +  N     N  +   G Y C A+N LG         +   AP+   E  K   
Sbjct: 158 HSGSFTITGNN---SNFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVE 214

Query: 230 TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL---TGGRYTILETGDLKITDVAFADS-GEY 285
             +G++VVL C    + +P   +  N K L      R T+ + G+L   +V  +D+  +Y
Sbjct: 215 VEEGESVVLPCHPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDY 274

Query: 286 TCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA------------------------ 321
            C        A   G+ T+     I  +P D  V+A                        
Sbjct: 275 ICH-------AHFPGTRTI-----IQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVAL 322

Query: 322 -GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
            GQ     C A   P+   +I WLR S P+   ++    Q+++ +L + K  E D G+Y 
Sbjct: 323 QGQPLVLECIAEGFPT--PTIKWLRPSGPM--PADRVTYQNHNKTLQLLKVGEEDDGEYR 378

Query: 381 CRAQTELDFIEAQATLTVQV 400
           C A+  L        +TV+ 
Sbjct: 379 CLAENSLGSARHAYYVTVEA 398


>gi|403262979|ref|XP_003923841.1| PREDICTED: contactin-5 [Saimiri boliviensis boliviensis]
          Length = 1100

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 163/606 (26%), Positives = 261/606 (43%), Gaps = 49/606 (8%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           A +   V++ C   G P+P   W K    +P     R SQ      L I +V+  D G Y
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQA----VLEIPNVQLDDAGIY 367

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C   N  G+  S+   L V   P++  +           + +ECKA+G P P   W+ N
Sbjct: 368 ECRAENSRGK-NSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKN 426

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--E 220
           G P+S   P  R ++    + I N+ +SD G Y C A N  G +Y    + +LA AP   
Sbjct: 427 GVPLS---PQSRVEMVNGVLMIRNVNQSDAGMYQCLAENKYGAIYASAELKILAAAPTFA 483

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
           + +  K       + V++ C+  G+PKP ++W    + +    R  IL  G L+I + + 
Sbjct: 484 LNQVKKTIIVTKDREVIIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASK 543

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           +D G+Y C   N  G+A+   SL+VKE T I   P+  E+  G+S    C A+ DPSL +
Sbjct: 544 SDEGKYICRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDPSLDV 603

Query: 340 SIVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +  W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A
Sbjct: 604 TFYWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEA 663

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKD 447
            L V+ P   P    +++ I    A +SW+P +          Y +Q        W    
Sbjct: 664 ELLVRGP-PGPPGIVIVEEITESTATLSWSPAADN--HSPISSYNLQARSPFSLGWQTVK 720

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGT 506
              ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T
Sbjct: 721 ---TVPEIITGDMESAMA-VD-LNPWVEYEFRVVATNLIGTGDPSTPSRMIRTNEAVPKT 775

Query: 507 VQSLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISD 561
             +  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+
Sbjct: 776 APTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSE 830

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPN 616
            +    +   + P T + + +  Y   GDG  S+ +        P   P  V+    + +
Sbjct: 831 ASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTEVKATSVSVS 890

Query: 617 NLVISW 622
            ++++W
Sbjct: 891 EILVAW 896



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 158/650 (24%), Positives = 242/650 (37%), Gaps = 76/650 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + A
Sbjct: 253 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPVTVTA 312

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I N++  D G Y 
Sbjct: 313 AKGTTVKMECFALGNPVPTITWMKVNG----YIPSKARLRKSQAVLEIPNVQLDDAGIYE 368

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V  + P   E   D     G  +   C+  G P+P   W+ N 
Sbjct: 369 CRAENSRGKNSFRGQLQVYTY-PHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG 427

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITDQ 313
             L+      +  G L I +V  +D+G Y C A NK G    S  L +        +   
Sbjct: 428 VPLSPQSRVEMVNGVLMIRNVNQSDAGMYQCLAENKYGAIYASAELKILAAAPTFALNQV 487

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +   V   +     C     P  K +I W +G   +      R     D SL +  +S+
Sbjct: 488 KKTIIVTKDREVIIECKPQGSP--KPTISWKKGDRAV--RENKRIAILPDGSLRILNASK 543

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI---QVIDAKKAV------- 420
            D G+Y CR +      E  A+L+V+ P      P    L     ++   KA+       
Sbjct: 544 SDEGKYICRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDPSLDV 603

Query: 421 -----VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
                +   P+  +   GHF   + Q       +  IR +++         V     +  
Sbjct: 604 TFYWTLKGQPIDFEEEGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQTTADSVS 660

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
           + A +L       GPP          G PG V   E   +  S   L W      +  + 
Sbjct: 661 DEAELLV-----RGPP----------GPPGIVIVEE---ITESTATLSWSPAADNHSPIS 702

Query: 536 GYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y ++ +S     +G   ++ +P I      SA    L P  +Y   +      G G  S
Sbjct: 703 SYNLQARS--PFSLGWQTVKTVPEIITGDMESAMAVDLNPWVEYEFRVVATNLIGTGDPS 760

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P NV GR    + LVI+W  + E   N   F Y + +R + T  
Sbjct: 761 TPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT-R 819

Query: 649 AWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
            W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V
Sbjct: 820 GWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVV 867



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 149/394 (37%), Gaps = 39/394 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           KKV L C   G P+P   W ++G  I+  SD       G  +I    E  D G Y C  +
Sbjct: 117 KKVALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLAT 176

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N +G   S    L       F+      ++  E + V   C      PE    WV N  P
Sbjct: 177 NTLGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 236

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
            S    + RR +      + I  ++ SD G+Y C   N++                  V 
Sbjct: 237 -SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVM 295

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            +    +  H P    A K      G TV + C   G P P + W+     +        
Sbjct: 296 GEYEPKIEVHFPVTVTAAK------GTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK 349

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               L+I +V   D+G Y C A N  G     G L V  + H  ++  D ++++G    +
Sbjct: 350 SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRW 409

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  + +  WL+   P+  +S    V      L +   ++ D+G Y C A+ + 
Sbjct: 410 ECKATGKP--RPTYRWLKNGVPLSPQSRVEMVNG---VLMIRNVNQSDAGMYQCLAENKY 464

Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
             I A A L +   L A   F L QV   KK ++
Sbjct: 465 GAIYASAELKI---LAAAPTFALNQV---KKTII 492



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 125/297 (42%), Gaps = 35/297 (11%)

Query: 113 AKSYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
           + ++  D SV   P F  EP+   F   ++E+ V   C+  G P P   W+ NG  I   
Sbjct: 86  SDAFRQDESVDYGPVFVQEPDDIIFPTDSDEKKVALNCEVRGNPVPSYRWLRNGTEI-DL 144

Query: 170 PPNPRRKVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
             + R  +      I N  ++ D+G+Y C ATN+LG +         A+    +   +  
Sbjct: 145 ESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNTLGSILSREATLQFAYLGNFSGRTRSA 204

Query: 229 YTV-DGKTVVLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVA 278
            +V +G+ VVL C    +P P       +W+ N+          R+   ETG+L I+ V 
Sbjct: 205 VSVREGQGVVLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQ 260

Query: 279 FADSGEYTCFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATF 327
            +D G Y C  +N +  A+       LT++    + +     EV          G +   
Sbjct: 261 TSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPVTVTAAKGTTVKM 320

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
            C A+ +P    +I W++ +  I  ++  R  Q+    L +      D+G Y CRA+
Sbjct: 321 ECFALGNPV--PTITWMKVNGYIPSKARLRKSQA---VLEIPNVQLDDAGIYECRAE 372



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  ++++V + C   G+P P   W K    +  + RI+    G SL I +   SD+
Sbjct: 488 KKTIIVTKDREVIIECKPQGSPKPTISWKKGDRAVRENKRIAILPDG-SLRILNASKSDE 546

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI-- 157
           G Y C   N  G A+  +  LSV       + P+       E++   CKA   P  ++  
Sbjct: 547 GKYICRGENVFGSAEIIA-SLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDPSLDVTF 605

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          + R +     + I N+     G YGC
Sbjct: 606 YWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGC 650


>gi|134054436|emb|CAM73212.1| zgc:55318 [Danio rerio]
          Length = 937

 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 165/604 (27%), Positives = 263/604 (43%), Gaps = 45/604 (7%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGS 101
           +A +   V L C   G P+P   W K    +P     R SQ      L I +++  D GS
Sbjct: 269 LAAKGVTVRLECFALGNPVPTITWRKMSGNIPKKARLRKSQA----VLEIPNIQLEDSGS 324

Query: 102 YTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVH 161
           Y C+  N  G   ++   L V   P +            E + +EC+A+G P P   W+ 
Sbjct: 325 YECKAENTRG-GTAFRGHLQVYTLPQWISMINDTQLDSGEQLRWECRATGKPRPTYRWLR 383

Query: 162 NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           NG+P+S      R ++    +TI  L+++D+G Y C A N  G +Y    + +LA AP  
Sbjct: 384 NGEPLST---QSRVEMVNGELTIHRLQQADSGMYQCIAENKYGAIYSSAELKILASAPMF 440

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
              P       GK V L CR   +PKP ++W  N + L    R  +L    L+I + + +
Sbjct: 441 NNNPVRLIATVGKDVSLECRPRASPKPRISWRKNDRRLQPSRRIMLLRNNTLRIINSSRS 500

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D G Y C A N+ G+A+ +  L VKE   +   P   EV  G+S    C    DPSL +S
Sbjct: 501 DEGSYVCRAENQFGSAELTTVLLVKEPMRVELSPLRVEVTVGESVVLSCKVTHDPSLDVS 560

Query: 341 IVWLRGSEPIDFESEP---RFVQSNDYSLTVTKSSEL--DSGQYTCRAQTELDFIEAQAT 395
            +WL  ++P++ + +     ++Q+   +  +   S L   +G+Y CRAQT  D + A+A 
Sbjct: 561 FLWLLNNQPLNTQQDGGHFEYIQTQSSTADLMIRSILLKHAGKYGCRAQTSTDSVLAEAE 620

Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKD-GEGSI 452
           L V+ P   P    +++ I A  A +SW+      +  H     Y VQ  +    G  ++
Sbjct: 621 LLVRGP-PGPPGVVIVEEITASTATLSWS----HGVDNHSPITTYNVQARSPVSLGWQTV 675

Query: 453 R---ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG---PPSEIISFVTPEGVPGT 506
           +   + +    ES    VD   P  +   RV+A N    G   PPS  +   T E VP  
Sbjct: 676 KTDPDPVTGSMESAMA-VD-LNPWVEYEFRVVATNSIGTGDPSPPSRAVR--TKEAVPSV 731

Query: 507 V-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
              ++           + W  V  E  NG   GY + ++ V GT+     E++   +D T
Sbjct: 732 APANVRGGNGRRHELVISWEPVSEEYQNGEGFGYIVAFR-VNGTR--GWKEKMVTSADST 788

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNL 618
           T   +     P T + + +  Y   GDG  S+ +        P + P  V+    + + +
Sbjct: 789 TYKYRDETFPPLTPFEVRVGVYNNKGDGPFSEVVTVFSAEGEPREPPSEVQAFAVSSSEI 848

Query: 619 VISW 622
            + W
Sbjct: 849 KVLW 852



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 166/693 (23%), Positives = 260/693 (37%), Gaps = 106/693 (15%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS----IDLS---VLAAPYFTVE---PEFINA 137
           +L I  V+ SD GSY C+V N V  A+  S    + L    V+      +E   P+ + A
Sbjct: 211 NLYIPKVQPSDVGSYVCQVKNTVTNARVLSPPTPLTLKTDGVMGEYEPKIEAHFPQTVLA 270

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           A+  TV  EC A G P P I W    K     P   R +     + I N++  D+G+Y C
Sbjct: 271 AKGVTVRLECFALGNPVPTITW---RKMSGNIPKKARLRKSQAVLEIPNIQLEDSGSYEC 327

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK 257
            A N+ G      ++ V    P+      D     G+ +   CR  G P+P   W+ N +
Sbjct: 328 KAENTRGGTAFRGHLQVYT-LPQWISMINDTQLDSGEQLRWECRATGKPRPTYRWLRNGE 386

Query: 258 ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI-TDQPED 316
            L+      +  G+L I  +  ADSG Y C A NK G    S  L +     +  + P  
Sbjct: 387 PLSTQSRVEMVNGELTIHRLQQADSGMYQCIAENKYGAIYSSAELKILASAPMFNNNPVR 446

Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
                G+  +  C   + P  ++S  W +    +        +++N  +L +  SS  D 
Sbjct: 447 LIATVGKDVSLECRPRASPKPRIS--WRKNDRRLQPSRRIMLLRNN--TLRIINSSRSDE 502

Query: 377 GQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVS-------------- 422
           G Y CRA+ +    E    L V+ P+    +   ++V   +  V+S              
Sbjct: 503 GSYVCRAENQFGSAELTTVLLVKEPMRVELSPLRVEVTVGESVVLSCKVTHDPSLDVSFL 562

Query: 423 W----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK----GESTTTEVDKFVPAS 474
           W     P++ Q   GHF   + Q+ T    +  IR +++      G    T  D  +  +
Sbjct: 563 WLLNNQPLNTQQDGGHFEYIQTQSST---ADLMIRSILLKHAGKYGCRAQTSTDSVLAEA 619

Query: 475 KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
           +   R         GPP          G PG V   E   + +S   L W      +  +
Sbjct: 620 ELLVR---------GPP----------GPPGVVIVEE---ITASTATLSWSHGVDNHSPI 657

Query: 535 MGYKIKYQSVKGTKVGPLLERLPYISDPTT---TSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             Y ++ +S     V    + +    DP T    SA    L P  +Y   +      G G
Sbjct: 658 TTYNVQARS----PVSLGWQTVKTDPDPVTGSMESAMAVDLNPWVEYEFRVVATNSIGTG 713

Query: 592 AES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
             S      +    VP   P NV G     + LVISW  + E   N   F Y + +R + 
Sbjct: 714 DPSPPSRAVRTKEAVPSVAPANVRGGNGRRHELVISWEPVSEEYQNGEGFGYIVAFRVNG 773

Query: 646 TGEAWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTT 703
           T   W +  V     +     ++  P   P+E++V               +  NKG+   
Sbjct: 774 T-RGWKEKMVTSADSTTYKYRDETFPPLTPFEVRV--------------GVYNNKGDGPF 818

Query: 704 TEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 736
           +EV            V +  G    PPSE+ +F
Sbjct: 819 SEV----------VTVFSAEGEPREPPSEVQAF 841



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 150/590 (25%), Positives = 247/590 (41%), Gaps = 100/590 (16%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P++   R+   N    L I  ++ +D G Y C   N  G   
Sbjct: 369 CRATGKPRPTYRWLRNGEPLSTQSRVEMVN--GELTIHRLQQADSGMYQCIAENKYGAIY 426

Query: 115 SYSIDLSVLA-APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           S S +L +LA AP F   P  + A   + V+ EC+    P+P I W  N + +      P
Sbjct: 427 S-SAELKILASAPMFNNNPVRLIATVGKDVSLECRPRASPKPRISWRKNDRRL-----QP 480

Query: 174 RRKV---GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE-APKDEY 229
            R++     N + I N  +SD G+Y C A N  G    ++   +L   P   E +P    
Sbjct: 481 SRRIMLLRNNTLRIINSSRSDEGSYVCRAENQFGSA--ELTTVLLVKEPMRVELSPLRVE 538

Query: 230 TVDGKTVVLTCRVFGAPKPEVN--WIHNQKELT----GGRYTILET----GDLKITDVAF 279
              G++VVL+C+V   P  +V+  W+ N + L     GG +  ++T     DL I  +  
Sbjct: 539 VTVGESVVLSCKVTHDPSLDVSFLWLLNNQPLNTQQDGGHFEYIQTQSSTADLMIRSILL 598

Query: 280 ADSGEY---------TCFARNKL-------------------GTAQGSGSLTVKEHTHIT 311
             +G+Y         +  A  +L                    TA  S S  V  H+ IT
Sbjct: 599 KHAGKYGCRAQTSTDSVLAEAELLVRGPPGPPGVVIVEEITASTATLSWSHGVDNHSPIT 658

Query: 312 DQPEDYEVEAGQSATFRCNAV-SDPSLKLSIVWLRGSEPIDFESEPRF-VQSN---DYSL 366
                Y V+A    +     V +DP            +P+    E    V  N   +Y  
Sbjct: 659 T----YNVQARSPVSLGWQTVKTDP------------DPVTGSMESAMAVDLNPWVEYEF 702

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-VPLEAPSNFTLIQVIDAKK--AVVSW 423
            V  ++ + +G  +           ++A  T + VP  AP+N   ++  + ++   V+SW
Sbjct: 703 RVVATNSIGTGDPSP---------PSRAVRTKEAVPSVAPAN---VRGGNGRRHELVISW 750

Query: 424 NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEV--DKFVPASKNFARVL 481
            PVS +   G   GY V      +G    +E +V   +STT +   + F P +    RV 
Sbjct: 751 EPVSEEYQNGEGFGYIVAF--RVNGTRGWKEKMVTSADSTTYKYRDETFPPLTPFEVRVG 808

Query: 482 AFNGAYNGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
            +N   +GP SE+++  + EG P    S ++A  + SS   + W  P    G   GY++ 
Sbjct: 809 VYNNKGDGPFSEVVTVFSAEGEPREPPSEVQAFAVSSSEIKVLWKPPSPGLGRPQGYEVS 868

Query: 541 Y-QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           + + V+  ++G     L        T+  L+GL+ +T+Y + + G+  AG
Sbjct: 869 FWKDVEQEELGKKKRTLG-----NETNMLLSGLDGNTQYLVSVKGFNSAG 913



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 139/372 (37%), Gaps = 33/372 (8%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEV 106
           +KK+ + C   G P+P   W  +G  ++            +LII +  E  D G Y C  
Sbjct: 74  DKKIIMNCEARGNPVPTYSWLINGTNVDTEADFRYSLIDGNLIIHNASEVIDYGRYQCRA 133

Query: 107 SNGVGEAKSYSIDLS-VLAAPYFTVEPEFINAAEEETVTFECK-ASGLPEPEIHWVHNGK 164
            N +G   S    L      P+       ++  E + V   C   S  PE    WV N  
Sbjct: 134 ENSIGIVLSRDALLQFAYLGPFSGKTRGAVSVREGQGVVLMCAPPSHSPEIIYSWVFNEL 193

Query: 165 PISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------V 206
           P S    + RR +      + I  ++ SD G+Y C   N++                  V
Sbjct: 194 P-SFVAEDSRRFISQETGNLYIPKVQPSDVGSYVCQVKNTVTNARVLSPPTPLTLKTDGV 252

Query: 207 YKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
             +    + AH P+   A K      G TV L C   G P P + W      +       
Sbjct: 253 MGEYEPKIEAHFPQTVLAAK------GVTVRLECFALGNPVPTITWRKMSGNIPKKARLR 306

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
                L+I ++   DSG Y C A N  G     G L V           D ++++G+   
Sbjct: 307 KSQAVLEIPNIQLEDSGSYECKAENTRGGTAFRGHLQVYTLPQWISMINDTQLDSGEQLR 366

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + C A   P  + +  WLR  EP+  +S    V      LT+ +  + DSG Y C A+ +
Sbjct: 367 WECRATGKP--RPTYRWLRNGEPLSTQSRVEMVNGE---LTIHRLQQADSGMYQCIAENK 421

Query: 387 LDFIEAQATLTV 398
              I + A L +
Sbjct: 422 YGAIYSSAELKI 433



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 114/284 (40%), Gaps = 33/284 (11%)

Query: 125 APYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P F  EP+   F   ++++ +   C+A G P P   W+ NG  +          +  N 
Sbjct: 56  GPVFIQEPDDAIFSLDSDDKKIIMNCEARGNPVPTYSWLINGTNVDTEADFRYSLIDGNL 115

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTC 240
           I        D G Y C A NS+G V     +   A+    +   +   +V +G+ VVL C
Sbjct: 116 IIHNASEVIDYGRYQCRAENSIGIVLSRDALLQFAYLGPFSGKTRGAVSVREGQGVVLMC 175

Query: 241 RVFGAP---KPEV--NWIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCFARN 291
               AP    PE+  +W+ N+          R+   ETG+L I  V  +D G Y C  +N
Sbjct: 176 ----APPSHSPEIIYSWVFNELPSFVAEDSRRFISQETGNLYIPKVQPSDVGSYVCQVKN 231

Query: 292 KLGTAQGSG---SLTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSLKLS 340
            +  A+       LT+K    + +         P+      G +    C A+ +P    +
Sbjct: 232 TVTNARVLSPPTPLTLKTDGVMGEYEPKIEAHFPQTVLAAKGVTVRLECFALGNPV--PT 289

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           I W + S  I  ++  R  Q+    L +      DSG Y C+A+
Sbjct: 290 ITWRKMSGNIPKKARLRKSQA---VLEIPNIQLEDSGSYECKAE 330


>gi|71297177|gb|AAH39255.1| CNTN5 protein [Homo sapiens]
          Length = 617

 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 164/611 (26%), Positives = 263/611 (43%), Gaps = 49/611 (8%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           A +   V++ C   G P+P   W K    +P     R SQ      L I +V+  D G Y
Sbjct: 18  AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQA----VLEIPNVQLDDAGIY 73

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C   N  G+  S+   L V   P++  +           + +ECKA+G P P   W+ N
Sbjct: 74  ECRAENSRGK-NSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKN 132

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--E 220
           G P+S   P  R ++    + I N+ +SD G Y C A N  G +Y    + +LA AP   
Sbjct: 133 GVPLS---PQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFA 189

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
           + +  K       + VV+ C+  G+PKP ++W    + +    R  IL  G L+I + + 
Sbjct: 190 LNQLKKTIIVTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASK 249

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           +D G+Y C   N  G+A+   SL+VKE T I   P+  E+  G+S    C A+ D SL +
Sbjct: 250 SDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 309

Query: 340 SIVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +  W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A
Sbjct: 310 TFYWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEA 369

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKD 447
            L V+ P   P    +++ I    A +SW+P +          Y +Q        W    
Sbjct: 370 ELLVRGP-PGPPGIVIVEEITESTATLSWSPAADN--HSPISSYNLQARSPFSLGWQTVK 426

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGT 506
              ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T
Sbjct: 427 ---TVPEIITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKT 481

Query: 507 VQSLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISD 561
             +  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+
Sbjct: 482 APTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSE 536

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPN 616
            +    +   + P T + + +  Y   GDG  S+ +        P   P +V+    + +
Sbjct: 537 ASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVS 596

Query: 617 NLVISWTAMPE 627
            ++++W  + E
Sbjct: 597 EILVAWKHIKE 607



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 141/596 (23%), Positives = 218/596 (36%), Gaps = 66/596 (11%)

Query: 132 PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKS 190
           P  + AA+  TV  EC A G P P I W+  NG      P   R +     + I N++  
Sbjct: 13  PFTVTAAKGTTVKMECFALGNPVPTITWMKVNG----YIPSKARLRKSQAVLEIPNVQLD 68

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A NS G       + V  + P   E   D     G  +   C+  G P+P  
Sbjct: 69  DAGIYECRAENSRGKNSFRGQLQVYTY-PHWVEKLNDTQLDSGSPLRWECKATGKPRPTY 127

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-- 308
            W+ N   L+      +  G L I +V  +D+G Y C A NK G    S  L +      
Sbjct: 128 RWLKNGVPLSPQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPT 187

Query: 309 -HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
             +    +   V   Q     C     P  K +I W +G   +      R     D SL 
Sbjct: 188 FALNQLKKTIIVTKDQEVVIECKPQGSP--KPTISWKKGDRAV--RENKRIAILPDGSLR 243

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVS 427
           +  +S+ D G+Y CR +      E  A+L+V+ P          ++   +  V++   + 
Sbjct: 244 ILNASKSDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIH 303

Query: 428 PQSLR------------------GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDK 469
             SL                   GHF   + Q       +  IR +++         V  
Sbjct: 304 DASLDVTFYWTLKGQPIDFEEEGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQT 360

Query: 470 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQ 529
              +  + A +L       GPP          G PG V   E   +  S   L W     
Sbjct: 361 TADSVSDEAELLV-----RGPP----------GPPGIVIVEE---ITESTATLSWSPAAD 402

Query: 530 PNGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
            +  +  Y ++ +S     +G   ++ +P I      SA    L P  +Y   +      
Sbjct: 403 NHSPISSYNLQARS--PFSLGWQTVKTVPEIITGDMESAMAVDLNPWVEYEFRVVATNPI 460

Query: 589 GDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G G  S      +    VP   P NV GR    + LVI+W  + E   N   F Y + +R
Sbjct: 461 GTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFR 520

Query: 643 RHNTGEAWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
            + T   W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V
Sbjct: 521 PNGT-RGWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVV 573



 Score = 46.2 bits (108), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  ++++V + C   G+P P   W K    +  + RI+    G SL I +   SD+
Sbjct: 194 KKTIIVTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDG-SLRILNASKSDE 252

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI-- 157
           G Y C   N  G A+  +  LSV       + P+       E++   CKA      ++  
Sbjct: 253 GKYVCRGENVFGSAEIIA-SLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 311

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          + R +     + I N+     G YGC
Sbjct: 312 YWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGC 356


>gi|432942191|ref|XP_004082977.1| PREDICTED: neuronal cell adhesion molecule-like [Oryzias latipes]
          Length = 1264

 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 154/513 (30%), Positives = 238/513 (46%), Gaps = 43/513 (8%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           ++ L+   ++L CI  G P P   W K G  + P++R++  N+GK L I  V  SD G Y
Sbjct: 242 KMVLKGVLLQLECIAEGLPTPDVSWQKVGGEL-PNNRMALHNFGKILQISDVSESDAGDY 300

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C   N +G    + I ++V AAP++   P+ +  A  ET    C+ +G P+P+I W  N
Sbjct: 301 RCTAKNKLGLVH-HVIKVAVKAAPFWISAPKNLILAPNETGILTCRVNGSPKPKISWFVN 359

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           G PI  A  +  RKV  + + I N++   +  Y CNA+N  GYV  + +V+VLA  P++ 
Sbjct: 360 GVPIENAAADRSRKVDEDTVIISNVQIGSSAVYQCNASNEFGYVMANAFVSVLAEPPKML 419

Query: 223 EAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQKEL--TGGRYTILETGDLKITDVAF 279
             P   Y V   +   L C  FG+P P ++W  + +     G +Y I E G L+I     
Sbjct: 420 TPPNQVYQVITNRPAFLDCSSFGSPIPTISWFKDGRISIENGDQYVIHENGTLEIMVAQV 479

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
            ++G+YTC A N LG  + S +L VKE T I +QP+   V+ G SA F C    D SL  
Sbjct: 480 LNTGKYTCVATNNLGMRENSVNLEVKEPTRILEQPKYKVVQRGMSARFDCKVKHDKSLIP 539

Query: 340 SIVWL--RGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
            + WL  RG  P D     R+           + S+  S   TC       F+ + +T T
Sbjct: 540 IMTWLKDRGELPDD----ERY----------KRPSQGVSQTMTCL------FLHSHSTAT 579

Query: 398 VQVPLEAPSNFTLIQVIDAKKAV-VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
           +    + P++  L     A+++V ++W P    +       + VQ       +G    L 
Sbjct: 580 LLRKPDPPTDLELTD--QAERSVQLTWTPGDENN--SPILSFLVQYEDSLHHKGLWVNLT 635

Query: 457 VNKGESTTTEVDKFVPASKNFARVLAFNG-AYNGPPSEIISFVT----PEGVPGTVQSLE 511
              G  TTT+++   P      RVLA N   Y+ P +    + T    P+  P  VQ + 
Sbjct: 636 EVDGSKTTTQLE-LSPYVYYSFRVLARNNVGYSEPSNPSSQYRTNPAAPDENPSNVQGVG 694

Query: 512 AIPLGSSAFYLKWVKPE--QPNGVLMGYKIKYQ 542
             P       + W+     Q NG  + YK+ ++
Sbjct: 695 TKP---DNMVISWMPLTGYQANGPGLKYKVHWK 724



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 143/564 (25%), Positives = 240/564 (42%), Gaps = 83/564 (14%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGP--NRITIENLRKSDTGNYGCNAT 200
           +  EC A GLP P++ W   G  +    PN R  +      + I ++ +SD G+Y C A 
Sbjct: 250 LQLECIAEGLPTPDVSWQKVGGEL----PNNRMALHNFGKILQISDVSESDAGDYRCTAK 305

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ---K 257
           N LG V+  + V V A AP    APK+      +T +LTCRV G+PKP+++W  N    +
Sbjct: 306 NKLGLVHHVIKVAVKA-APFWISAPKNLILAPNETGILTCRVNGSPKPKISWFVNGVPIE 364

Query: 258 ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEH--THITDQPE 315
                R   ++   + I++V    S  Y C A N+ G    +  ++V       +T   +
Sbjct: 365 NAAADRSRKVDEDTVIISNVQIGSSAVYQCNASNEFGYVMANAFVSVLAEPPKMLTPPNQ 424

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
            Y+V   + A   C++   P   +S  W +    I  E+  ++V   + +L +  +  L+
Sbjct: 425 VYQVITNRPAFLDCSSFGSPIPTIS--WFKDGR-ISIENGDQYVIHENGTLEIMVAQVLN 481

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           +G+YTC A   L   E    L V+ P   LE P    + + + A+             ++
Sbjct: 482 TGKYTCVATNNLGMRENSVNLEVKEPTRILEQPKYKVVQRGMSARFDC---------KVK 532

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 492
                  + TW +  GE    E      +  +  +      S + A +L        PP+
Sbjct: 533 HDKSLIPIMTWLKDRGELPDDERYKRPSQGVSQTMTCLFLHSHSTATLLR----KPDPPT 588

Query: 493 EIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQS--------- 543
           +                LE       +  L W   ++ N  ++ + ++Y+          
Sbjct: 589 D----------------LELTDQAERSVQLTWTPGDENNSPILSFLVQYEDSLHHKGLWV 632

Query: 544 ----VKGTKVGPLLERLPYISDPTTTSAK-----LAGLEPSTKYRIHLAGYTKAGDGAES 594
               V G+K    LE  PY+       A+          PS++YR + A           
Sbjct: 633 NLTEVDGSKTTTQLELSPYVYYSFRVLARNNVGYSEPSNPSSQYRTNPAA---------- 682

Query: 595 KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
                 P +NP NV+G G+ P+N+VISW  +   + N P  KY++ W+R +  E+W+  +
Sbjct: 683 ------PDENPSNVQGVGTKPDNMVISWMPLTGYQANGPGLKYKVHWKRRDMDESWSSQN 736

Query: 655 VLDWRQSELVLANQPTFQPYEIKV 678
           V+D  +S+LV+   PT+ PYEIKV
Sbjct: 737 VVD--KSQLVVDGTPTYVPYEIKV 758



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 94/199 (47%), Gaps = 11/199 (5%)

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG------EGSIR 453
           VPL AP     ++V D   A V W PV+  S+RG  +GYKV T+ +  G      EG  R
Sbjct: 781 VPLSAPEKVQ-VRVQDGTLAEVHWKPVNASSVRGQLQGYKV-TYQKLRGLLGGEEEGQQR 838

Query: 454 E-LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA 512
           E +IV  G+ +  ++    P S     +   N    GP S   +F TPEGVPG    L  
Sbjct: 839 EKVIVFSGDQSHGQIPDLQPFSIYRLSIKVLNNKGEGPSSSNQTFETPEGVPGPPSFLNV 898

Query: 513 IPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGL 572
           I  G  +  L+W  P   NG L GY ++YQ V  +     +  L + ++ T T+  L  L
Sbjct: 899 ISPGLDSLSLEWGPPVNNNGRLTGYTLRYQPVNQSAEQGFVHELNFFANETATT--LDHL 956

Query: 573 EPSTKYRIHLAGYTKAGDG 591
             S  Y+ +L+  T  G G
Sbjct: 957 NTSMLYKFYLSARTIKGSG 975



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 139/583 (23%), Positives = 220/583 (37%), Gaps = 58/583 (9%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVG 111
           L C   G+P P+  W  +GVPI N +   S+     ++II +V+      Y C  SN  G
Sbjct: 342 LTCRVNGSPKPKISWFVNGVPIENAAADRSRKVDEDTVIISNVQIGSSAVYQCNASNEFG 401

Query: 112 EAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGK-PISQ 168
              + +  +SVLA P   + P  +            +C + G P P I W  +G+  I  
Sbjct: 402 YVMANAF-VSVLAEPPKMLTPPNQVYQVITNRPAFLDCSSFGSPIPTISWFKDGRISIEN 460

Query: 169 APPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP-EITEAPKD 227
                  + G   I +  +   +TG Y C ATN+LG   ++  VN+    P  I E PK 
Sbjct: 461 GDQYVIHENGTLEIMVAQVL--NTGKYTCVATNNLG--MRENSVNLEVKEPTRILEQPKY 516

Query: 228 EYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGG-RYTILETGDLKITDVAFADSGE 284
           +    G +    C+V       P + W+ ++ EL    RY     G  +     F  S  
Sbjct: 517 KVVQRGMSARFDCKVKHDKSLIPIMTWLKDRGELPDDERYKRPSQGVSQTMTCLFLHSHS 576

Query: 285 YTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWL 344
                R          +   +    +T  P D       S         + SL    +W+
Sbjct: 577 TATLLRKPDPPTDLELTDQAERSVQLTWTPGD----ENNSPILSFLVQYEDSLHHKGLWV 632

Query: 345 RGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCR--AQTELDFIE-----AQATLT 397
             +E              D S T T+        Y+ R  A+  + + E     +Q    
Sbjct: 633 NLTE-------------VDGSKTTTQLELSPYVYYSFRVLARNNVGYSEPSNPSSQYRTN 679

Query: 398 VQVPLEAPSNFTLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGS-IRE 454
              P E PSN   +Q +  K    V+SW P++     G    YKV  W  +D + S   +
Sbjct: 680 PAAPDENPSN---VQGVGTKPDNMVISWMPLTGYQANGPGLKYKVH-WKRRDMDESWSSQ 735

Query: 455 LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
            +V+K +        +VP      +V A N   NGP  EI    + E VP +      + 
Sbjct: 736 NVVDKSQLVVDGTPTYVPYE---IKVQALNDYGNGPDPEIAIGYSGEDVPLSAPEKVQVR 792

Query: 515 LGSSAF---YLKWVKPEQPNGVLMGYKIKYQSVKGT----KVGPLLERLPYISDPTTTSA 567
           +        + K V      G L GYK+ YQ ++G     + G   E++   S    +  
Sbjct: 793 VQDGTLAEVHWKPVNASSVRGQLQGYKVTYQKLRGLLGGEEEGQQREKVIVFSG-DQSHG 851

Query: 568 KLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEG 610
           ++  L+P + YR+ +      G+G  S       F+ P+ V G
Sbjct: 852 QIPDLQPFSIYRLSIKVLNNKGEGPSSSNQT---FETPEGVPG 891



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 98/440 (22%), Positives = 177/440 (40%), Gaps = 31/440 (7%)

Query: 8   EYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKK-VELFCIFGGTPLPQTI 66
           +Y++   ILL+ + +      +   P    +   K+     ++ + + C   G P P   
Sbjct: 2   DYRVVLLILLSHVTSAFEVPLDLPQPPTITLQSPKDYIFDPREHIIIHCEAKGNPQPSFR 61

Query: 67  WSKDGVPIN-PSDRISQGNYGKSL----IIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLS 121
           W+++G   +  SD     N G       II     + +G+Y C   N  G+A +  I + 
Sbjct: 62  WARNGTDFDVKSDSKIVMNPGSGTLDIDIIGGKAEAYEGTYQCTAENEHGKALTNKIVIR 121

Query: 122 VLAAPYFTVEP-EFINAAEEETVTFECKA-SGLPEPEIHWVHNGKPISQAPPNPRRKVGP 179
              +P +  E  E +   +   +   C+  +GLP P I W+ N     Q      + +  
Sbjct: 122 QSRSPLWPKERNEAMVRQKGAPLVLRCQPPAGLPPPVIFWMDNNFQRLQLDERVSQALNG 181

Query: 180 NRITIENLRKSDTGNYGCNA----TNSLGYVYKDVYVNVLAHAPEITEAPK--------- 226
           +      L +    +Y C A    T ++    + + V VL + P+    P+         
Sbjct: 182 DLYFSNVLPEDARDDYICYARFPHTQTIQQ-KQPISVVVLDNNPQGERRPRILLPSEPTS 240

Query: 227 DEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD-LKITDVAFADSGEY 285
            +  + G  + L C   G P P+V+W     EL   R  +   G  L+I+DV+ +D+G+Y
Sbjct: 241 TKMVLKGVLLQLECIAEGLPTPDVSWQKVGGELPNNRMALHNFGKILQISDVSESDAGDY 300

Query: 286 TCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLR 345
            C A+NKLG       + VK        P++  +   ++    C     P  K+S  W  
Sbjct: 301 RCTAKNKLGLVHHVIKVAVKAAPFWISAPKNLILAPNETGILTCRVNGSPKPKIS--WFV 358

Query: 346 GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAP 405
              PI+  +  R  + ++ ++ ++      S  Y C A  E  ++ A A ++V    E P
Sbjct: 359 NGVPIENAAADRSRKVDEDTVIISNVQIGSSAVYQCNASNEFGYVMANAFVSVLA--EPP 416

Query: 406 SNFT----LIQVIDAKKAVV 421
              T    + QVI  + A +
Sbjct: 417 KMLTPPNQVYQVITNRPAFL 436


>gi|148223934|ref|NP_001085487.1| neuronal cell adhesion molecule precursor [Xenopus laevis]
 gi|49117906|gb|AAH72835.1| MGC80200 protein [Xenopus laevis]
          Length = 1177

 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 123/376 (32%), Positives = 185/376 (49%), Gaps = 14/376 (3%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           CI  G P P+  W K+   + P+ R+   N+ K+L I  V  +D G Y C   N +G   
Sbjct: 281 CIAEGLPTPEIHWRKESADL-PAGRVFYENFNKTLRIIDVTEADAGKYKCIGRNILGTTH 339

Query: 115 SYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPR 174
            + I ++V ++PY+   P  I  +  E  +  C+ASG P P I W+ NG  I  AP +  
Sbjct: 340 -HIITVNVKSSPYWISPPTNIVLSPGEDGSLICRASGNPTPSITWLINGVSIELAPTDAS 398

Query: 175 RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK 234
           R+V  + I    ++   T  Y CN +N  GY+  + +VNVLA  P I         +   
Sbjct: 399 RRVDGDTIIFSKVQDGATAVYQCNVSNKYGYLLANAFVNVLAEPPRIMVLKHVYKVIANN 458

Query: 235 TVVLTCRVFGAPKPEVNW---IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARN 291
             +L C  FG+PKPE+ W   +H    L G  Y   + G L+I       SG YTC A N
Sbjct: 459 VALLHCPFFGSPKPEIKWFKGVHGSI-LHGNGYVFHDNGTLEIPVAQKDSSGNYTCVATN 517

Query: 292 KLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID 351
             G+ +    L +K+ T I  QPE   ++   SA F C    DP+LK  ++WL+     +
Sbjct: 518 TFGSVKDMIGLQIKDPTMIIKQPEYRVIQRYGSAHFECRVKHDPTLKPVVLWLKDDS--E 575

Query: 352 FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLI 411
             ++ RF  +  + LT+   +E D G YTC A T+LD + A A LTV   ++ P++   +
Sbjct: 576 LLNDERFKMTKGH-LTIKNVTEKDEGTYTCVANTDLDTVSASAVLTV---VDRPNHPFDL 631

Query: 412 QVIDAKKAVV--SWNP 425
           ++ D  +  V  SW P
Sbjct: 632 ELTDHHERSVQLSWVP 647



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 134/553 (24%), Positives = 209/553 (37%), Gaps = 55/553 (9%)

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS---------DTGNYGC 197
           C A GLP PEIHW      +              R+  EN  K+         D G Y C
Sbjct: 281 CIAEGLPTPEIHWRKESADLPAG-----------RVFYENFNKTLRIIDVTEADAGKYKC 329

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN-- 255
              N LG  +  + VNV + +P     P +     G+   L CR  G P P + W+ N  
Sbjct: 330 IGRNILGTTHHIITVNVKS-SPYWISPPTNIVLSPGEDGSLICRASGNPTPSITWLINGV 388

Query: 256 QKELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTV-KEHTHITDQ 313
             EL     +    GD  I + V    +  Y C   NK G    +  + V  E   I   
Sbjct: 389 SIELAPTDASRRVDGDTIIFSKVQDGATAVYQCNVSNKYGYLLANAFVNVLAEPPRIMVL 448

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
              Y+V A   A   C     P  K  I W +G           +V  ++ +L +  + +
Sbjct: 449 KHVYKVIANNVALLHCPFFGSP--KPEIKWFKGVHGSILHGN-GYVFHDNGTLEIPVAQK 505

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRG 433
             SG YTC A      ++    L ++ P       T+I      + +  +     +    
Sbjct: 506 DSSGNYTCVATNTFGSVKDMIGLQIKDP-------TMIIKQPEYRVIQRYGSAHFECRVK 558

Query: 434 HFRGYK-VQTWTEKDGEGSIRELI-VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
           H    K V  W + D E    E   + KG  T   V +     +     +A         
Sbjct: 559 HDPTLKPVVLWLKDDSELLNDERFKMTKGHLTIKNVTE---KDEGTYTCVANTDLDTVSA 615

Query: 492 SEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP 551
           S +++ V     P     LE       +  L WV  +  N  +  + I+Y+        P
Sbjct: 616 SAVLTVV---DRPNHPFDLELTDHHERSVQLSWVPGDDNNSPITNFMIEYEDAMH---DP 669

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG--DGAESKYLFYV----PFKNP 605
            +         T T+A L+ L P   Y   +    + G  D +ES   +      P KNP
Sbjct: 670 GIWHFQAKVSGTQTTATLS-LSPFVNYSFRVIAVNEIGSSDPSESSEQYMTKPAEPDKNP 728

Query: 606 DNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVL 665
             ++G G+ P+NLVI+W  +   + N P  +Y++ WR+ +  + W    ++    S+ ++
Sbjct: 729 SGIKGVGTEPDNLVIAWEPIKGFDSNGPGLQYKVSWRQKDFDDEWTS--IIVANVSKYIV 786

Query: 666 ANQPTFQPYEIKV 678
           +  PTF+PYEIKV
Sbjct: 787 SGTPTFEPYEIKV 799



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 95/201 (47%), Gaps = 12/201 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW-----TEKDGEGSIRE 454
            +P+ APSN   ++VI+   A V W      S+RGH +GY+V  W     T+++     + 
Sbjct: 822  LPMTAPSNVE-VEVINNTLAKVQWESAPSTSIRGHLQGYRVYYWKAENQTKRNKRHMEKH 880

Query: 455  LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
            ++   G  T   +    P       V  FNG   GPPS    F TPEGVP     L+ + 
Sbjct: 881  MLSFHGNKTHGMLPGLEPFKSYIVNVRVFNGKGEGPPSTDKYFETPEGVPSAPLKLDIVE 940

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERLPYISDPTT-TSAKLAGL 572
                +  L W  P  PNGVL  Y + +QS+  T ++ P +E    I+ PT  TS  L  L
Sbjct: 941  RTIDSLTLMWKPPAHPNGVLTQYTLIFQSINATHELSPPVE----ITIPTNETSLVLRNL 996

Query: 573  EPSTKYRIHLAGYTKAGDGAE 593
              ST+Y+ +L   T  G G +
Sbjct: 997  NQSTRYKFYLYANTAVGPGIQ 1017



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 146/601 (24%), Positives = 225/601 (37%), Gaps = 64/601 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPIN--PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
           L C   G P P   W  +GV I   P+D  S+   G ++I   V+      Y C VSN  
Sbjct: 369 LICRASGNPTPSITWLINGVSIELAPTDA-SRRVDGDTIIFSKVQDGATAVYQCNVSNKY 427

Query: 111 GEAKSYSIDLSVLAAP-YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
           G   + +  ++VLA P    V                C   G P+PEI W   G   S  
Sbjct: 428 GYLLANAF-VNVLAEPPRIMVLKHVYKVIANNVALLHCPFFGSPKPEIKWF-KGVHGSIL 485

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
             N         + I   +K  +GNY C ATN+ G V KD+    +     I + P+   
Sbjct: 486 HGNGYVFHDNGTLEIPVAQKDSSGNYTCVATNTFGSV-KDMIGLQIKDPTMIIKQPEYRV 544

Query: 230 TVDGKTVVLTCRVFGAP--KPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTC 287
                +    CRV   P  KP V W+ +  EL       +  G L I +V   D G YTC
Sbjct: 545 IQRYGSAHFECRVKHDPTLKPVVLWLKDDSELLNDERFKMTKGHLTIKNVTEKDEGTYTC 604

Query: 288 FARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC------------------ 329
            A   L T   S  LTV +     + P D E+      + +                   
Sbjct: 605 VANTDLDTVSASAVLTVVDRP---NHPFDLELTDHHERSVQLSWVPGDDNNSPITNFMIE 661

Query: 330 --NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
             +A+ DP +      + G++     S   FV   +YS  V   +E+ S   +  ++  +
Sbjct: 662 YEDAMHDPGIWHFQAKVSGTQTTATLSLSPFV---NYSFRVIAVNEIGSSDPSESSEQYM 718

Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVI--DAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE 445
                        P E   N + I+ +  +    V++W P+      G    YKV +W +
Sbjct: 719 -----------TKPAEPDKNPSGIKGVGTEPDNLVIAWEPIKGFDSNGPGLQYKV-SWRQ 766

Query: 446 KDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVP 504
           KD +     +IV N  +   +    F P      +V A N     P   +I   + E +P
Sbjct: 767 KDFDDEWTSIIVANVSKYIVSGTPTFEPYE---IKVQALNDIGYAPDPSVIIGYSGEDLP 823

Query: 505 GTVQS-LEAIPLGSSAFYLKWVKPEQPN--GVLMGYKIKYQSVKGT--KVGPLLERLPYI 559
            T  S +E   + ++   ++W      +  G L GY++ Y   +    +    +E+    
Sbjct: 824 MTAPSNVEVEVINNTLAKVQWESAPSTSIRGHLQGYRVYYWKAENQTKRNKRHMEKHMLS 883

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLV 619
                T   L GLEP   Y +++  +   G+G  S   +   F+ P   EG  S P  L 
Sbjct: 884 FHGNKTHGMLPGLEPFKSYIVNVRVFNGKGEGPPSTDKY---FETP---EGVPSAPLKLD 937

Query: 620 I 620
           I
Sbjct: 938 I 938



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 77/187 (41%), Gaps = 10/187 (5%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLI 90
           P +  V +     + N    L C F G+P P+  W K   G  ++ +  +   N   +L 
Sbjct: 442 PPRIMVLKHVYKVIANNVALLHCPFFGSPKPEIKWFKGVHGSILHGNGYVFHDN--GTLE 499

Query: 91  IKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKAS 150
           I   +    G+YTC  +N  G  K   I L +        +PE+       +  FEC+  
Sbjct: 500 IPVAQKDSSGNYTCVATNTFGSVKDM-IGLQIKDPTMIIKQPEYRVIQRYGSAHFECRVK 558

Query: 151 GLP--EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYK 208
             P  +P + W+ +    S+   + R K+    +TI+N+ + D G Y C A   L  V  
Sbjct: 559 HDPTLKPVVLWLKDD---SELLNDERFKMTKGHLTIKNVTEKDEGTYTCVANTDLDTVSA 615

Query: 209 DVYVNVL 215
              + V+
Sbjct: 616 SAVLTVV 622



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 82/204 (40%), Gaps = 19/204 (9%)

Query: 102 YTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECKASGLPEPEIHWV 160
           + C+V   +       + L +L  P  T + P+       E++  +C+A G P P   W 
Sbjct: 17  FLCQVITAL------EVPLDLLQPPTITHQSPKNYIVDPRESIVIQCEAKGKPPPSFSWT 70

Query: 161 HNGKPISQAPPNPRRKVGPNR----ITIENLRKSDT--GNYGCNATNSLGYVYKDVYVNV 214
            NG        +P   + PN     I   N  + D   G Y C A N  G    +  V  
Sbjct: 71  RNGTHF-DIDKDPYVTMKPNSGTLVINTMNGARVDAYEGEYQCTARNDRGSALSNNIVIR 129

Query: 215 LAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN--QKELTGGRYTILETG 270
            + +P  T+   +   +  G  +VL C    G P P + W+ N  QK     R +    G
Sbjct: 130 QSRSPLWTKEKIEPIVLQQGVPLVLPCNPPKGLPPPIIFWMDNSFQKLPQNKRVSQGLNG 189

Query: 271 DLKITDVAFADSGE-YTCFARNKL 293
           DL  ++V   D+ + Y C+AR  L
Sbjct: 190 DLYFSNVQPEDTRDFYICYARFNL 213


>gi|297690021|ref|XP_002822428.1| PREDICTED: contactin-5 isoform 1 [Pongo abelii]
          Length = 1100

 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 164/611 (26%), Positives = 263/611 (43%), Gaps = 49/611 (8%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           A +   V++ C   G P+P   W K    +P     R SQ      L I +V+  D G Y
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQA----VLEIPNVQLDDAGIY 367

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C   N  G+  S+   L V   P++  +           + +ECKA+G P P   W+ N
Sbjct: 368 ECRAENSRGK-NSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKN 426

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--E 220
           G P+S   P  R ++    + I N+ +SD G Y C A N  G +Y    + +LA AP   
Sbjct: 427 GVPLS---PQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFA 483

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
           + +  K       + VV+ C+  G+PKP ++W    + +    R  IL  G L+I + + 
Sbjct: 484 LNQLKKTIIVTKDREVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASK 543

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           +D G+Y C   N  G+A+   SL+VKE T I   P+  E+  G+S    C A+ D SL +
Sbjct: 544 SDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 603

Query: 340 SIVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +  W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A
Sbjct: 604 TFYWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEA 663

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKD 447
            L V+ P   P    +++ I    A +SW+P +          Y +Q        W    
Sbjct: 664 ELLVRGP-PGPPGIVIVEEITESTATLSWSPAADN--HSPISSYNLQARSPFSLGWQTVK 720

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGT 506
              ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T
Sbjct: 721 ---TVPEIITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKT 775

Query: 507 VQSLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISD 561
             +  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+
Sbjct: 776 APTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSE 830

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPN 616
            +    +   + P T + + +  Y   GDG  S+ +        P   P +V+    + +
Sbjct: 831 ASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVS 890

Query: 617 NLVISWTAMPE 627
            ++++W  + E
Sbjct: 891 EILVAWKHIKE 901



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 159/650 (24%), Positives = 241/650 (37%), Gaps = 76/650 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + A
Sbjct: 253 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 312

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I N++  D G Y 
Sbjct: 313 AKGTTVKMECFALGNPVPTITWMKVNG----YIPSKARLRKSQAVLEIPNVQLDDAGIYE 368

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V  + P   E   D     G  +   C+  G P+P   W+ N 
Sbjct: 369 CRAENSRGKNSFRGQLQVYTY-PHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG 427

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITDQ 313
             L+      +  G L I +V  +D+G Y C A NK G    S  L +        +   
Sbjct: 428 VPLSPQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQL 487

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +   V   +     C     P  K +I W +G   +      R     D SL +  +S+
Sbjct: 488 KKTIIVTKDREVVIECKPQGSP--KPTISWKKGDRAV--RENKRIAILPDGSLRILNASK 543

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI----------QVIDAKKAV 420
            D G+Y CR +      E  A+L+V+ P      P    L            + DA   V
Sbjct: 544 SDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 603

Query: 421 VSW-----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
             +      P+  +   GHF   + Q       +  IR +++         V     +  
Sbjct: 604 TFYWTLKGQPIDFEEEGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQTTADSVS 660

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
           + A +L       GPP          G PG V   E   +  S   L W      +  + 
Sbjct: 661 DEAELLV-----RGPP----------GPPGIVIVEE---ITESTATLSWSPAADNHSPIS 702

Query: 536 GYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y ++ +S     +G   ++ +P I      SA    L P  +Y   +      G G  S
Sbjct: 703 SYNLQARS--PFSLGWQTVKTVPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPS 760

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P NV GR    + LVI+W  + E   N   F Y + +R + T  
Sbjct: 761 TPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT-R 819

Query: 649 AWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
            W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V
Sbjct: 820 GWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVV 867



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 127/297 (42%), Gaps = 35/297 (11%)

Query: 113 AKSYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
           + ++  D SV   P F  EP+   F   ++E+ V  +C+  G P+P   W+ NG  I   
Sbjct: 86  SDAFKQDESVDYGPVFVQEPDDIIFPTDSDEKKVALKCEVRGNPDPSYRWLRNGTEI-DL 144

Query: 170 PPNPRRKVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
             + R  +      I N  ++ D+G+Y C ATN+LG +         A+    +   +  
Sbjct: 145 ESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNTLGSILSREATLQFAYLGNFSGRTRSA 204

Query: 229 YTV-DGKTVVLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVA 278
            +V +G+ VVL C    +P P       +W+ N+          R+   ETG+L I+ V 
Sbjct: 205 VSVREGQGVVLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQ 260

Query: 279 FADSGEYTCFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATF 327
            +D G Y C  +N +  A+       LT++    + +     EV          G +   
Sbjct: 261 TSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKM 320

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
            C A+ +P    +I W++ +  I  ++  R  Q+    L +      D+G Y CRA+
Sbjct: 321 ECFALGNPV--PTITWMKVNGYIPSKARLRKSQA---VLEIPNVQLDDAGIYECRAE 372



 Score = 47.0 bits (110), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  ++++V + C   G+P P   W K    +  + RI+    G SL I +   SD+
Sbjct: 488 KKTIIVTKDREVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDG-SLRILNASKSDE 546

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEI 157
           G Y C   N  G A+  +  LSV       + P+       E++   CKA      +   
Sbjct: 547 GKYVCRGENVFGSAEIIA-SLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 605

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          + R +     + I N+     G YGC
Sbjct: 606 YWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGC 650


>gi|114639974|ref|XP_001148002.1| PREDICTED: contactin-5 isoform 2 [Pan troglodytes]
 gi|332837597|ref|XP_001147868.2| PREDICTED: contactin-5 isoform 1 [Pan troglodytes]
          Length = 1100

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 163/611 (26%), Positives = 262/611 (42%), Gaps = 49/611 (8%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           A +   V++ C   G P+P   W K    +P     R SQ      L I +V+  D G Y
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQA----VLEIPNVQLDDAGIY 367

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C   N  G+  S+   L V   P++  +           + +ECKA+G P P   W+ N
Sbjct: 368 ECRAENSRGK-NSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKN 426

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--E 220
           G P+S   P  R ++    + I N+ +SD G Y C A N  G +Y    + +LA AP   
Sbjct: 427 GVPLS---PQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFA 483

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
           + +  K       + VV+ C+  G+PKP ++W    + +    R  IL  G L+I + + 
Sbjct: 484 LNQLKKTIIVTKDREVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASK 543

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           +D G+Y C   N  G+A+   SL+VKE T I   P+  E+  G+S    C A+ D SL +
Sbjct: 544 SDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 603

Query: 340 SIVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +  W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A
Sbjct: 604 TFYWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEA 663

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKD 447
            L V+ P   P    +++ I    A +SW+P +          Y +Q        W    
Sbjct: 664 ELLVRGP-PGPPGIVIVEEITESSATLSWSPAADN--HSPISSYNLQARSPFSLGWQTVK 720

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGT 506
              ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T
Sbjct: 721 ---TVPEIITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKT 775

Query: 507 V-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISD 561
              ++           + W  V  E  NG   GY + ++    +G K     E++   S+
Sbjct: 776 APTNVRGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSE 830

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPN 616
            +    +   + P T + + +  Y   GDG  S+ +        P   P +V+    + +
Sbjct: 831 ASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVS 890

Query: 617 NLVISWTAMPE 627
            ++++W  + E
Sbjct: 891 EILVAWKHIKE 901



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 159/650 (24%), Positives = 242/650 (37%), Gaps = 76/650 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + A
Sbjct: 253 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 312

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I N++  D G Y 
Sbjct: 313 AKGTTVKMECFALGNPVPTITWMKVNG----YIPSKARLRKSQAVLEIPNVQLDDAGIYE 368

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V  + P   E   D     G  +   C+  G P+P   W+ N 
Sbjct: 369 CRAENSRGKNSFRGQLQVYTY-PHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG 427

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITDQ 313
             L+      +  G L I +V  +D+G Y C A NK G    S  L +        +   
Sbjct: 428 VPLSPQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQL 487

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +   V   +     C     P  K +I W +G   +      R     D SL +  +S+
Sbjct: 488 KKTIIVTKDREVVIECKPQGSP--KPTISWKKGDRAV--RENKRIAILPDGSLRILNASK 543

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI----------QVIDAKKAV 420
            D G+Y CR +      E  A+L+V+ P      P    L            + DA   V
Sbjct: 544 SDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 603

Query: 421 VSW-----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
             +      P+  +   GHF   + Q       +  IR +++         V     +  
Sbjct: 604 TFYWTLKGQPIDFEEEGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQTTADSVS 660

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
           + A +L       GPP          G PG V   E   +  S+  L W      +  + 
Sbjct: 661 DEAELLV-----RGPP----------GPPGIVIVEE---ITESSATLSWSPAADNHSPIS 702

Query: 536 GYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y ++ +S     +G   ++ +P I      SA    L P  +Y   +      G G  S
Sbjct: 703 SYNLQARS--PFSLGWQTVKTVPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPS 760

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P NV GR    + LVI+W  + E   N   F Y + +R + T  
Sbjct: 761 TPSRMIRTNEAVPKTAPTNVRGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT-R 819

Query: 649 AWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
            W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V
Sbjct: 820 GWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVV 867



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 149/394 (37%), Gaps = 39/394 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           KKV L C   G P+P   W ++G  I+  SD       G  +I    E  D G Y C  +
Sbjct: 117 KKVALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLAT 176

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N +G   S    L       F+      ++  E + V   C      PE    WV N  P
Sbjct: 177 NTLGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 236

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
            S    + RR +      + I  ++ SD G+Y C   N++                  V 
Sbjct: 237 -SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVM 295

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            +    +  H P    A K      G TV + C   G P P + W+     +        
Sbjct: 296 GEYEPKIEVHFPFTVTAAK------GTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK 349

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               L+I +V   D+G Y C A N  G     G L V  + H  ++  D ++++G    +
Sbjct: 350 SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRW 409

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  + +  WL+   P+  +S    V      L +   ++ D+G Y C A+ + 
Sbjct: 410 ECKATGKP--RPTYRWLKNGVPLSPQSRVEMVNG---VLMIHNVNQSDAGMYQCLAENKY 464

Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
             I A A L +   L +   F L Q+   KK ++
Sbjct: 465 GAIYASAELKI---LASAPTFALNQL---KKTII 492



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 125/297 (42%), Gaps = 35/297 (11%)

Query: 113 AKSYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
           + ++  D SV   P F  EP+   F   ++E+ V   C+  G P P   W+ NG  I   
Sbjct: 86  SDAFKQDESVDYGPVFVQEPDDIIFPTDSDEKKVALNCEVRGNPVPSYRWLRNGTEI-DL 144

Query: 170 PPNPRRKVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
             + R  +      I N  ++ D+G+Y C ATN+LG +         A+    +   +  
Sbjct: 145 ESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNTLGSILSREATLQFAYLGNFSGRTRSA 204

Query: 229 YTV-DGKTVVLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVA 278
            +V +G+ VVL C    +P P       +W+ N+          R+   ETG+L I+ V 
Sbjct: 205 VSVREGQGVVLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQ 260

Query: 279 FADSGEYTCFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATF 327
            +D G Y C  +N +  A+       LT++    + +     EV          G +   
Sbjct: 261 TSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKM 320

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
            C A+ +P    +I W++ +  I  ++  R  Q+    L +      D+G Y CRA+
Sbjct: 321 ECFALGNPV--PTITWMKVNGYIPSKARLRKSQA---VLEIPNVQLDDAGIYECRAE 372



 Score = 46.6 bits (109), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  ++++V + C   G+P P   W K    +  + RI+    G SL I +   SD+
Sbjct: 488 KKTIIVTKDREVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDG-SLRILNASKSDE 546

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEI 157
           G Y C   N  G A+  +  LSV       + P+       E++   CKA      +   
Sbjct: 547 GKYVCRGENVFGSAEIIA-SLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 605

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          + R +     + I N+     G YGC
Sbjct: 606 YWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGC 650


>gi|28373129|ref|NP_780775.1| contactin-5 isoform 2 precursor [Homo sapiens]
 gi|5672494|dbj|BAA36580.2| hNB-2s [Homo sapiens]
 gi|119587397|gb|EAW66993.1| contactin 5, isoform CRA_b [Homo sapiens]
          Length = 1026

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 164/611 (26%), Positives = 263/611 (43%), Gaps = 49/611 (8%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           A +   V++ C   G P+P   W K    +P     R SQ      L I +V+  D G Y
Sbjct: 238 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQA----VLEIPNVQLDDAGIY 293

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C   N  G+  S+   L V   P++  +           + +ECKA+G P P   W+ N
Sbjct: 294 ECRAENSRGK-NSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKN 352

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--E 220
           G P+S   P  R ++    + I N+ +SD G Y C A N  G +Y    + +LA AP   
Sbjct: 353 GVPLS---PQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFA 409

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
           + +  K       + VV+ C+  G+PKP ++W    + +    R  IL  G L+I + + 
Sbjct: 410 LNQLKKTIIVTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASK 469

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           +D G+Y C   N  G+A+   SL+VKE T I   P+  E+  G+S    C A+ D SL +
Sbjct: 470 SDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 529

Query: 340 SIVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +  W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A
Sbjct: 530 TFYWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEA 589

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKD 447
            L V+ P   P    +++ I    A +SW+P +          Y +Q        W    
Sbjct: 590 ELLVRGP-PGPPGIVIVEEITESTATLSWSPAADN--HSPISSYNLQARSPFSLGWQTVK 646

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGT 506
              ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T
Sbjct: 647 ---TVPEIITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKT 701

Query: 507 VQSLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISD 561
             +  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+
Sbjct: 702 APTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSE 756

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPN 616
            +    +   + P T + + +  Y   GDG  S+ +        P   P +V+    + +
Sbjct: 757 ASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVS 816

Query: 617 NLVISWTAMPE 627
            ++++W  + E
Sbjct: 817 EILVAWKHIKE 827



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 160/650 (24%), Positives = 241/650 (37%), Gaps = 76/650 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + A
Sbjct: 179 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 238

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I N++  D G Y 
Sbjct: 239 AKGTTVKMECFALGNPVPTITWMKVNG----YIPSKARLRKSQAVLEIPNVQLDDAGIYE 294

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V  + P   E   D     G  +   C+  G P+P   W+ N 
Sbjct: 295 CRAENSRGKNSFRGQLQVYTY-PHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG 353

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITDQ 313
             L+      +  G L I +V  +D+G Y C A NK G    S  L +        +   
Sbjct: 354 VPLSPQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQL 413

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +   V   Q     C     P  K +I W +G   +      R     D SL +  +S+
Sbjct: 414 KKTIIVTKDQEVVIECKPQGSP--KPTISWKKGDRAV--RENKRIAILPDGSLRILNASK 469

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI----------QVIDAKKAV 420
            D G+Y CR +      E  A+L+V+ P      P    L            + DA   V
Sbjct: 470 SDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 529

Query: 421 VSW-----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
             +      P+  +   GHF   + Q       +  IR +++         V     +  
Sbjct: 530 TFYWTLKGQPIDFEEEGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQTTADSVS 586

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
           + A +L       GPP          G PG V   E   +  S   L W      +  + 
Sbjct: 587 DEAELLV-----RGPP----------GPPGIVIVEE---ITESTATLSWSPAADNHSPIS 628

Query: 536 GYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y ++ +S     +G   ++ +P I      SA    L P  +Y   +      G G  S
Sbjct: 629 SYNLQARS--PFSLGWQTVKTVPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPS 686

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P NV GR    + LVI+W  + E   N   F Y + +R + T  
Sbjct: 687 TPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT-R 745

Query: 649 AWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
            W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V
Sbjct: 746 GWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVV 793



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 149/394 (37%), Gaps = 39/394 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           KKV L C   G P+P   W ++G  I+  SD       G  +I    E  D G Y C  +
Sbjct: 43  KKVALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLAT 102

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N VG   S    L       F+      ++  E + V   C      PE    WV N  P
Sbjct: 103 NTVGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 162

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
            S    + RR +      + I  ++ SD G+Y C   N++                  V 
Sbjct: 163 -SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVM 221

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            +    +  H P    A K      G TV + C   G P P + W+     +        
Sbjct: 222 GEYEPKIEVHFPFTVTAAK------GTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK 275

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               L+I +V   D+G Y C A N  G     G L V  + H  ++  D ++++G    +
Sbjct: 276 SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRW 335

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  + +  WL+   P+  +S    V      L +   ++ D+G Y C A+ + 
Sbjct: 336 ECKATGKP--RPTYRWLKNGVPLSPQSRVEMVNG---VLMIHNVNQSDAGMYQCLAENKY 390

Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
             I A A L +   L +   F L Q+   KK ++
Sbjct: 391 GAIYASAELKI---LASAPTFALNQL---KKTII 418



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 116/288 (40%), Gaps = 33/288 (11%)

Query: 121 SVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
           SV   P F  EP+   F   ++E+ V   C+  G P P   W+ NG  I          +
Sbjct: 20  SVDYGPVFVQEPDDIIFPTDSDEKKVALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLI 79

Query: 178 GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTV 236
               I        D+G+Y C ATN++G +         A+    +   +   +V +G+ V
Sbjct: 80  DGTFIISNPSEAKDSGHYQCLATNTVGSILSREATLQFAYLGNFSGRTRSAVSVREGQGV 139

Query: 237 VLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTC 287
           VL C    +P P       +W+ N+          R+   ETG+L I+ V  +D G Y C
Sbjct: 140 VLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYIC 195

Query: 288 FARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATFRCNAVSDPS 336
             +N +  A+       LT++    + +     EV          G +    C A+ +P 
Sbjct: 196 LVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPV 255

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
              +I W++ +  I  ++  R  Q+    L +      D+G Y CRA+
Sbjct: 256 --PTITWMKVNGYIPSKARLRKSQA---VLEIPNVQLDDAGIYECRAE 298



 Score = 46.2 bits (108), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  ++++V + C   G+P P   W K    +  + RI+    G SL I +   SD+
Sbjct: 414 KKTIIVTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDG-SLRILNASKSDE 472

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEI 157
           G Y C   N  G A+  +  LSV       + P+       E++   CKA      +   
Sbjct: 473 GKYVCRGENVFGSAEIIA-SLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 531

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          + R +     + I N+     G YGC
Sbjct: 532 YWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGC 576


>gi|397516456|ref|XP_003828446.1| PREDICTED: contactin-5 [Pan paniscus]
          Length = 911

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 163/611 (26%), Positives = 263/611 (43%), Gaps = 49/611 (8%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           A +   V++ C   G P+P   W K    +P     R SQ      L I +V+  D G Y
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQA----VLEIPNVQLDDAGIY 367

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C   N  G+  S+   L V   P++  +           + +ECKA+G P P   W+ N
Sbjct: 368 ECRAENSRGK-NSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKN 426

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--E 220
           G P+S   P  R ++    + I N+ +SD G Y C A N  G +Y    + +LA AP   
Sbjct: 427 GVPLS---PQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFA 483

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
           + +  K       + VV+ C+  G+PKP ++W    + +    R  +L  G L+I + + 
Sbjct: 484 LNQLKKTIIVTKDREVVIECKPQGSPKPTISWKKGDRAVRENKRIAVLPDGSLRILNASK 543

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           +D G+Y C   N  G+A+   SL+VKE T I   P+  E+  G+S    C A+ D SL +
Sbjct: 544 SDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 603

Query: 340 SIVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +  W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A
Sbjct: 604 TFYWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEA 663

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKD 447
            L V+ P   P    +++ I    A +SW+P +          Y +Q        W    
Sbjct: 664 ELLVRGP-PGPPGIVIVEEITESSATLSWSPAADN--HSPISSYNLQARSPFSLGWQTVK 720

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGT 506
              ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T
Sbjct: 721 ---TVPEIITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKT 775

Query: 507 VQSLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISD 561
             +  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+
Sbjct: 776 APTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSE 830

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPN 616
            +    +   + P T + + +  Y   GDG  S+ +        P   P +V+    + +
Sbjct: 831 ASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVS 890

Query: 617 NLVISWTAMPE 627
            ++++W  + E
Sbjct: 891 EILVAWKHIKE 901



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 159/650 (24%), Positives = 242/650 (37%), Gaps = 76/650 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + A
Sbjct: 253 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 312

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I N++  D G Y 
Sbjct: 313 AKGTTVKMECFALGNPVPTITWMKVNG----YIPSKARLRKSQAVLEIPNVQLDDAGIYE 368

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V  + P   E   D     G  +   C+  G P+P   W+ N 
Sbjct: 369 CRAENSRGKNSFRGQLQVYTY-PHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG 427

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITDQ 313
             L+      +  G L I +V  +D+G Y C A NK G    S  L +        +   
Sbjct: 428 VPLSPQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQL 487

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +   V   +     C     P  K +I W +G   +      R     D SL +  +S+
Sbjct: 488 KKTIIVTKDREVVIECKPQGSP--KPTISWKKGDRAV--RENKRIAVLPDGSLRILNASK 543

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI----------QVIDAKKAV 420
            D G+Y CR +      E  A+L+V+ P      P    L            + DA   V
Sbjct: 544 SDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 603

Query: 421 VSW-----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
             +      P+  +   GHF   + Q       +  IR +++         V     +  
Sbjct: 604 TFYWTLKGQPIDFEEEGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQTTADSVS 660

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
           + A +L       GPP          G PG V   E   +  S+  L W      +  + 
Sbjct: 661 DEAELLV-----RGPP----------GPPGIVIVEE---ITESSATLSWSPAADNHSPIS 702

Query: 536 GYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y ++ +S     +G   ++ +P I      SA    L P  +Y   +      G G  S
Sbjct: 703 SYNLQARS--PFSLGWQTVKTVPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPS 760

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P NV GR    + LVI+W  + E   N   F Y + +R + T  
Sbjct: 761 TPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT-R 819

Query: 649 AWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
            W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V
Sbjct: 820 GWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVV 867



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 149/394 (37%), Gaps = 39/394 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           KKV L C   G P+P   W ++G  I+  SD       G  +I    E  D G Y C  +
Sbjct: 117 KKVALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLAT 176

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N +G   S    L       F+      ++  E + V   C      PE    WV N  P
Sbjct: 177 NTLGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 236

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
            S    + RR +      + I  ++ SD G+Y C   N++                  V 
Sbjct: 237 -SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVM 295

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            +    +  H P    A K      G TV + C   G P P + W+     +        
Sbjct: 296 GEYEPKIEVHFPFTVTAAK------GTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK 349

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               L+I +V   D+G Y C A N  G     G L V  + H  ++  D ++++G    +
Sbjct: 350 SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRW 409

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  + +  WL+   P+  +S    V      L +   ++ D+G Y C A+ + 
Sbjct: 410 ECKATGKP--RPTYRWLKNGVPLSPQSRVEMVNG---VLMIHNVNQSDAGMYQCLAENKY 464

Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
             I A A L +   L +   F L Q+   KK ++
Sbjct: 465 GAIYASAELKI---LASAPTFALNQL---KKTII 492



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 125/297 (42%), Gaps = 35/297 (11%)

Query: 113 AKSYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
           + ++  D SV   P F  EP+   F   ++E+ V   C+  G P P   W+ NG  I   
Sbjct: 86  SDAFKQDESVDYGPVFVQEPDDIIFPTDSDEKKVALNCEVRGNPVPSYRWLRNGTEI-DL 144

Query: 170 PPNPRRKVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
             + R  +      I N  ++ D+G+Y C ATN+LG +         A+    +   +  
Sbjct: 145 ESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNTLGSILSREATLQFAYLGNFSGRTRSA 204

Query: 229 YTV-DGKTVVLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVA 278
            +V +G+ VVL C    +P P       +W+ N+          R+   ETG+L I+ V 
Sbjct: 205 VSVREGQGVVLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQ 260

Query: 279 FADSGEYTCFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATF 327
            +D G Y C  +N +  A+       LT++    + +     EV          G +   
Sbjct: 261 TSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKM 320

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
            C A+ +P    +I W++ +  I  ++  R  Q+    L +      D+G Y CRA+
Sbjct: 321 ECFALGNPV--PTITWMKVNGYIPSKARLRKSQA---VLEIPNVQLDDAGIYECRAE 372



 Score = 47.0 bits (110), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  ++++V + C   G+P P   W K    +  + RI+    G SL I +   SD+
Sbjct: 488 KKTIIVTKDREVVIECKPQGSPKPTISWKKGDRAVRENKRIAVLPDG-SLRILNASKSDE 546

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEI 157
           G Y C   N  G A+  +  LSV       + P+       E++   CKA      +   
Sbjct: 547 GKYVCRGENVFGSAEIIA-SLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 605

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          + R +     + I N+     G YGC
Sbjct: 606 YWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGC 650


>gi|170649623|gb|ACB21210.1| L1 cell adhesion molecule isoform 1 precursor (predicted)
           [Callicebus moloch]
          Length = 1252

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 191/718 (26%), Positives = 304/718 (42%), Gaps = 74/718 (10%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+D ++  N+ K+L +  V   D G Y 
Sbjct: 253 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADHVTYQNHNKTLQLLSVGEEDDGEYR 311

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ +   ++V AAPY+  +P+       ET   +C+  G P+PEI W  NG
Sbjct: 312 CVAENSLGSAR-HDYYVTVEAAPYWLQKPQNHLYGPGETARLDCQVQGRPQPEITWRING 370

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N + SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 371 IPVEELAKDQKYRIQRGALILSNAQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 430

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 431 ADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 490

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L +K+ T I   P     + G   TF C A  DPSL+ S
Sbjct: 491 DTGRYFCQAANDQNNVTIVANLQIKDATQIVQGPRSTIEKKGSRVTFTCQASFDPSLQPS 550

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 551 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 608

Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
                 VP  A S+  L++     +  +SW+P    +       Y ++   ++       
Sbjct: 609 VGSPGSVPRLALSDLHLLK---QNQVHLSWSPAEDHN--APIEKYDIEFEDKEMAPEKWY 663

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTV----- 507
            L    G  T+T + K  P      RV A N    G PS +  + VTPE  P        
Sbjct: 664 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVNVK 722

Query: 508 -QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
            +  E   +  +   L+W+    P    + Y+++++  +GT+ GP  E++  +SDP    
Sbjct: 723 GEGNETTNMVITWKPLRWMDWNAPQ---VQYRVQWRP-QGTR-GPWQEQI--VSDPFLVV 775

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
           +  +   P   Y I +    + G G E +    + +   D  +              A+P
Sbjct: 776 SNTSTFVP---YEIKVQAVNRQGKGPEPQ--VTIGYSGEDYPQ--------------AVP 816

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVL-DWRQSELVLANQPTFQPYEIKVVQTWTEK 685
           E+E                  E  N   VL  WR  +L    +   + Y +   +  +++
Sbjct: 817 ELE----------------GIEILNSSAVLVKWRPVDLAQV-KGHLRGYNVTYWREGSQR 859

Query: 686 --DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                 + R+ +V    +T+  +    P S     V AFNG   GP SE ++F TPEG
Sbjct: 860 KHSKRHTHRDHVVVPANTTSVILSGLRPYSSYQLEVQAFNGRGLGPASE-LTFNTPEG 916



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 165/690 (23%), Positives = 264/690 (38%), Gaps = 82/690 (11%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI +G    +LI+ + + SD     CE  
Sbjct: 352  LDCQVQGRPQPEITWRINGIPVEELAKDQKYRIQRG----ALILSNAQPSDTMVTQCEAR 407

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + +   A +  T    CKA G P P + W+  +G 
Sbjct: 408  NRHGLLLANAY-IYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGT 466

Query: 165  PISQAP---PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q     P     +G     I +L+ +DTG Y C A N    V   +  N+ +  A +
Sbjct: 467  TVLQDERFFPYANGTLG-----IRDLQANDTGRYFCQAANDQNNV--TIVANLQIKDATQ 519

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWIHNQKELTGGRYTILETGDLKITDVA 278
            I + P+      G  V  TC+    P  +P + W  + ++L        E GD   +D  
Sbjct: 520  IVQGPRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDGRDLQ-------ELGD---SDKY 569

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL- 337
            F + G     + +   + QG+ S        + +      V     +  R  A+SD  L 
Sbjct: 570  FIEDGRLVIHSLDY--SDQGNYSCVASTELDVVESRAQLLVVGSPGSVPRL-ALSDLHLL 626

Query: 338  ---KLSIVWLRGSE---PI---DFESEPRFVQSND-YSLTVTKSSELDSG-------QYT 380
               ++ + W    +   PI   D E E + +     YSL     ++  +         YT
Sbjct: 627  KQNQVHLSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYVHYT 686

Query: 381  CRAQTELDFIEAQ---ATLTVQVPLEAPSNFTLI---QVIDAKKAVVSWNPVSPQSLRGH 434
             R      +   +    + TV  P  AP    +    +  +    V++W P+        
Sbjct: 687  FRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVNVKGEGNETTNMVITWKPLRWMDWNAP 746

Query: 435  FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
               Y+VQ W  +   G  +E IV+      +    FVP      +V A N    GP  ++
Sbjct: 747  QVQYRVQ-WRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYE---IKVQAVNRQGKGPEPQV 802

Query: 495  ISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVKGTKV 549
                + E  P  V  LE I  L SSA  +KW  V   Q  G L GY + Y  +  +    
Sbjct: 803  TIGYSGEDYPQAVPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGYNVTYWREGSQRKHS 862

Query: 550  GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF---KNPD 606
                 R   +    TTS  L+GL P + Y++ +  +   G G  S+  F  P     +P+
Sbjct: 863  KRHTHRDHVVVPANTTSVILSGLRPYSSYQLEVQAFNGRGLGPASELTFNTPEGVPGHPE 922

Query: 607  NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLA 666
             +     +  +L + W   P + HN     Y + +R  + G         + R  EL   
Sbjct: 923  ALHVECQSNTSLRLHW--QPPLSHNGVLTGYVLSYRPLDEGGKGQLS--FNLRDPELRTH 978

Query: 667  NQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
            N     P   Y  ++  T  E  GE  +RE
Sbjct: 979  NLTDLSPHLRYRFQLQATTKEGPGEAIVRE 1008



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 161/389 (41%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS----QGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P D +     Q  +  S  I   + 
Sbjct: 43  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKDELGVTVYQSPHSGSFTITGNNS 102

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P      E E+V   C  
Sbjct: 103 NFAQRFQGIYRCFASNKLGTAMSHEIQLMAEGAPKWPKETVKPV--EVEEGESVVLPCHP 160

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 161 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 218

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 219 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 278

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +     T       L++  V   D GEY C A N LG+A+    +TV+   +   +
Sbjct: 279 PSGPMPADHVTYQNHNKTLQLLSVGEEDDGEYRCVAENSLGSARHDYYVTVEAAPYWLQK 338

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+++    G++A   C     P  +  I W     P++  ++ +  +    +L ++ +  
Sbjct: 339 PQNHLYGPGETARLDCQVQGRP--QPEITWRINGIPVEELAKDQKYRIQRGALILSNAQP 396

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A+     + A A +  VQ+P
Sbjct: 397 SDTMVTQCEARNRHGLLLANAYIYVVQLP 425


>gi|149716431|ref|XP_001499480.1| PREDICTED: contactin-5 isoform 3 [Equus caballus]
          Length = 1026

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 166/611 (27%), Positives = 261/611 (42%), Gaps = 49/611 (8%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           A +   V++ C   G P+P   W K    VP     R SQ      L I +V+  D G Y
Sbjct: 238 AAKGTTVKMECFALGNPVPTITWMKVNGYVPSKARLRKSQA----VLEIPNVQLDDAGIY 293

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C   N  G+  S+   L V   P++  +           + +ECKA+G P P   W+ N
Sbjct: 294 ECRAENSRGK-NSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKN 352

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--E 220
           G P+    P  R ++    + I N+ +SD G Y C A N  G +Y    + +LA AP   
Sbjct: 353 GVPLL---PQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFA 409

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
           +    K      G+ V + C+  G+PKP ++W    K +    R  IL  G L+I + + 
Sbjct: 410 LNHLKKTIIVTKGQEVTMECKPQGSPKPTISWKKGDKAVRENKRIAILPDGTLRILNASK 469

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           +D G+Y C   N  G+A+   SL+VKE T I   P+  E+  G+S    C A+ D SL +
Sbjct: 470 SDEGKYICQGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 529

Query: 340 SIVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +  W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A
Sbjct: 530 TFYWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEA 589

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKD 447
            L V+ P   P    +I+ I    A +SW+P +          Y +Q        W    
Sbjct: 590 ELLVRGP-PGPPGIVIIEEITESTATLSWSPAADN--HSPISSYNLQARSPFSLGWQTVK 646

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGT 506
              ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T
Sbjct: 647 ---TVPEIITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKT 701

Query: 507 VQSLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISD 561
             +  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+
Sbjct: 702 APTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSE 756

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPN 616
            +    +   + P T + + +  Y   GDG  S+ +        P   P +V+    + +
Sbjct: 757 ASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVS 816

Query: 617 NLVISWTAMPE 627
            ++++W  + E
Sbjct: 817 EILVAWKHIKE 827



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 160/650 (24%), Positives = 241/650 (37%), Gaps = 76/650 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  V+ SD GSY C V N V  A+  S    +            P   V  P  + A
Sbjct: 179 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFMVTA 238

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I N++  D G Y 
Sbjct: 239 AKGTTVKMECFALGNPVPTITWMKVNG----YVPSKARLRKSQAVLEIPNVQLDDAGIYE 294

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V  + P   E   D     G  +   C+  G P+P   W+ N 
Sbjct: 295 CRAENSRGKNSFRGQLQVYTY-PHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG 353

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITDQ 313
             L       +  G L I +V  +D+G Y C A NK G    S  L +        +   
Sbjct: 354 VPLLPQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFALNHL 413

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +   V  GQ  T  C     P  K +I W +G + +      R     D +L +  +S+
Sbjct: 414 KKTIIVTKGQEVTMECKPQGSP--KPTISWKKGDKAV--RENKRIAILPDGTLRILNASK 469

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI----------QVIDAKKAV 420
            D G+Y C+ +      E  A+L+V+ P      P    L            + DA   V
Sbjct: 470 SDEGKYICQGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 529

Query: 421 VSW-----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
             +      P+  +   GHF   + Q       +  IR +++         V     +  
Sbjct: 530 TFYWTLKGQPIDFEKEGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQTTADSVS 586

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
           + A +L       GPP          G PG V   E   +  S   L W      +  + 
Sbjct: 587 DEAELLV-----RGPP----------GPPGIVIIEE---ITESTATLSWSPAADNHSPIS 628

Query: 536 GYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y ++ +S     +G   ++ +P I      SA    L P  +Y   +      G G  S
Sbjct: 629 SYNLQARS--PFSLGWQTVKTVPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPS 686

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P NV GR    + LVI+W  + E   N   F Y + +R + T  
Sbjct: 687 TPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT-R 745

Query: 649 AWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
            W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V
Sbjct: 746 GWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVV 793



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 137/371 (36%), Gaps = 33/371 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           KKV L C   G P P   W ++G  I+  SD       G  +I    E  D G Y C   
Sbjct: 43  KKVALNCEVRGNPAPNYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLAV 102

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N  G   S    L       F+      ++  E + V   C      PE    WV N  P
Sbjct: 103 NTFGSILSREAILQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 162

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
            S    + RR +      + I  ++ SD G+Y C   N++                  V 
Sbjct: 163 -SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVM 221

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            +    +  H P +  A K      G TV + C   G P P + W+     +        
Sbjct: 222 GEYEPKIEVHFPFMVTAAK------GTTVKMECFALGNPVPTITWMKVNGYVPSKARLRK 275

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               L+I +V   D+G Y C A N  G     G L V  + H  ++  D ++++G    +
Sbjct: 276 SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRW 335

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  + +  WL+   P+  +S    V      L +   ++ D+G Y C A+ + 
Sbjct: 336 ECKATGKP--RPTYRWLKNGVPLLPQSRVEMVNG---VLMIHNVNQSDAGMYQCLAENKY 390

Query: 388 DFIEAQATLTV 398
             I A A L +
Sbjct: 391 GAIYASAELKI 401



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 114/288 (39%), Gaps = 33/288 (11%)

Query: 121 SVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
           SV   P F  EP+   F   ++E+ V   C+  G P P   W+ NG  I          +
Sbjct: 20  SVDYGPVFVQEPDDIIFPADSDEKKVALNCEVRGNPAPNYRWLRNGTEIDLESDYRYSLI 79

Query: 178 GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTV 236
               I        D+G+Y C A N+ G +     +   A+    +   +   +V +G+ V
Sbjct: 80  DGTFIISNPSEAKDSGHYQCLAVNTFGSILSREAILQFAYLGNFSGRTRSAVSVREGQGV 139

Query: 237 VLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTC 287
           VL C    +P P       +W+ N+          R+   ETG+L I+ V  +D G Y C
Sbjct: 140 VLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYIC 195

Query: 288 FARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATFRCNAVSDPS 336
             +N +  A+       LT++    + +     EV          G +    C A+ +P 
Sbjct: 196 LVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFMVTAAKGTTVKMECFALGNPV 255

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             ++ + + G  P    S+ R  +S    L +      D+G Y CRA+
Sbjct: 256 PTITWMKVNGYVP----SKARLRKSQAV-LEIPNVQLDDAGIYECRAE 298



 Score = 46.6 bits (109), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 17/188 (9%)

Query: 17  LNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINP 76
           L ++A+  + + N H  K   VT+ +EV +        C   G+P P   W K    +  
Sbjct: 399 LKILASAPTFALN-HLKKTIIVTKGQEVTME-------CKPQGSPKPTISWKKGDKAVRE 450

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFIN 136
           + RI+    G +L I +   SD+G Y C+  N  G A+  +  LSV       + P+   
Sbjct: 451 NKRIAILPDG-TLRILNASKSDEGKYICQGENVFGSAEIIA-SLSVKEPTRIELTPKRTE 508

Query: 137 AAEEETVTFECKA--SGLPEPEIHWVHNGKPISQAP-----PNPRRKVGPNRITIENLRK 189
               E++   CKA      +   +W   G+PI          + R +     + I N+  
Sbjct: 509 LTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILL 568

Query: 190 SDTGNYGC 197
              G YGC
Sbjct: 569 MHAGRYGC 576


>gi|7657359|ref|NP_055176.1| contactin-5 isoform 1 precursor [Homo sapiens]
 gi|343168755|ref|NP_001230199.1| contactin-5 isoform 1 precursor [Homo sapiens]
 gi|55976223|sp|O94779.2|CNTN5_HUMAN RecName: Full=Contactin-5; AltName: Full=Neural recognition
           molecule NB-2; Short=hNB-2; Flags: Precursor
 gi|5672487|dbj|BAA36579.2| hNB-2 [Homo sapiens]
 gi|119587396|gb|EAW66992.1| contactin 5, isoform CRA_a [Homo sapiens]
          Length = 1100

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 164/611 (26%), Positives = 263/611 (43%), Gaps = 49/611 (8%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           A +   V++ C   G P+P   W K    +P     R SQ      L I +V+  D G Y
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQA----VLEIPNVQLDDAGIY 367

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C   N  G+  S+   L V   P++  +           + +ECKA+G P P   W+ N
Sbjct: 368 ECRAENSRGK-NSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKN 426

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--E 220
           G P+S   P  R ++    + I N+ +SD G Y C A N  G +Y    + +LA AP   
Sbjct: 427 GVPLS---PQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFA 483

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
           + +  K       + VV+ C+  G+PKP ++W    + +    R  IL  G L+I + + 
Sbjct: 484 LNQLKKTIIVTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASK 543

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           +D G+Y C   N  G+A+   SL+VKE T I   P+  E+  G+S    C A+ D SL +
Sbjct: 544 SDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 603

Query: 340 SIVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +  W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A
Sbjct: 604 TFYWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEA 663

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKD 447
            L V+ P   P    +++ I    A +SW+P +          Y +Q        W    
Sbjct: 664 ELLVRGP-PGPPGIVIVEEITESTATLSWSPAADN--HSPISSYNLQARSPFSLGWQTVK 720

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGT 506
              ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T
Sbjct: 721 ---TVPEIITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKT 775

Query: 507 VQSLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISD 561
             +  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+
Sbjct: 776 APTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSE 830

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPN 616
            +    +   + P T + + +  Y   GDG  S+ +        P   P +V+    + +
Sbjct: 831 ASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVS 890

Query: 617 NLVISWTAMPE 627
            ++++W  + E
Sbjct: 891 EILVAWKHIKE 901



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 160/650 (24%), Positives = 241/650 (37%), Gaps = 76/650 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + A
Sbjct: 253 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 312

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I N++  D G Y 
Sbjct: 313 AKGTTVKMECFALGNPVPTITWMKVNG----YIPSKARLRKSQAVLEIPNVQLDDAGIYE 368

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V  + P   E   D     G  +   C+  G P+P   W+ N 
Sbjct: 369 CRAENSRGKNSFRGQLQVYTY-PHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG 427

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITDQ 313
             L+      +  G L I +V  +D+G Y C A NK G    S  L +        +   
Sbjct: 428 VPLSPQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQL 487

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +   V   Q     C     P  K +I W +G   +      R     D SL +  +S+
Sbjct: 488 KKTIIVTKDQEVVIECKPQGSP--KPTISWKKGDRAV--RENKRIAILPDGSLRILNASK 543

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI----------QVIDAKKAV 420
            D G+Y CR +      E  A+L+V+ P      P    L            + DA   V
Sbjct: 544 SDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 603

Query: 421 VSW-----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
             +      P+  +   GHF   + Q       +  IR +++         V     +  
Sbjct: 604 TFYWTLKGQPIDFEEEGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQTTADSVS 660

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
           + A +L       GPP          G PG V   E   +  S   L W      +  + 
Sbjct: 661 DEAELLV-----RGPP----------GPPGIVIVEE---ITESTATLSWSPAADNHSPIS 702

Query: 536 GYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y ++ +S     +G   ++ +P I      SA    L P  +Y   +      G G  S
Sbjct: 703 SYNLQARS--PFSLGWQTVKTVPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPS 760

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P NV GR    + LVI+W  + E   N   F Y + +R + T  
Sbjct: 761 TPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT-R 819

Query: 649 AWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
            W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V
Sbjct: 820 GWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVV 867



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 149/394 (37%), Gaps = 39/394 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           KKV L C   G P+P   W ++G  I+  SD       G  +I    E  D G Y C  +
Sbjct: 117 KKVALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLAT 176

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N VG   S    L       F+      ++  E + V   C      PE    WV N  P
Sbjct: 177 NTVGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 236

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
            S    + RR +      + I  ++ SD G+Y C   N++                  V 
Sbjct: 237 -SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVM 295

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            +    +  H P    A K      G TV + C   G P P + W+     +        
Sbjct: 296 GEYEPKIEVHFPFTVTAAK------GTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK 349

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               L+I +V   D+G Y C A N  G     G L V  + H  ++  D ++++G    +
Sbjct: 350 SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRW 409

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  + +  WL+   P+  +S    V      L +   ++ D+G Y C A+ + 
Sbjct: 410 ECKATGKP--RPTYRWLKNGVPLSPQSRVEMVNG---VLMIHNVNQSDAGMYQCLAENKY 464

Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
             I A A L +   L +   F L Q+   KK ++
Sbjct: 465 GAIYASAELKI---LASAPTFALNQL---KKTII 492



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 125/297 (42%), Gaps = 35/297 (11%)

Query: 113 AKSYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
           + ++  D SV   P F  EP+   F   ++E+ V   C+  G P P   W+ NG  I   
Sbjct: 86  SDAFKQDESVDYGPVFVQEPDDIIFPTDSDEKKVALNCEVRGNPVPSYRWLRNGTEI-DL 144

Query: 170 PPNPRRKVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
             + R  +      I N  ++ D+G+Y C ATN++G +         A+    +   +  
Sbjct: 145 ESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNTVGSILSREATLQFAYLGNFSGRTRSA 204

Query: 229 YTV-DGKTVVLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVA 278
            +V +G+ VVL C    +P P       +W+ N+          R+   ETG+L I+ V 
Sbjct: 205 VSVREGQGVVLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQ 260

Query: 279 FADSGEYTCFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATF 327
            +D G Y C  +N +  A+       LT++    + +     EV          G +   
Sbjct: 261 TSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKM 320

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
            C A+ +P    +I W++ +  I  ++  R  Q+    L +      D+G Y CRA+
Sbjct: 321 ECFALGNPV--PTITWMKVNGYIPSKARLRKSQA---VLEIPNVQLDDAGIYECRAE 372



 Score = 46.2 bits (108), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  ++++V + C   G+P P   W K    +  + RI+    G SL I +   SD+
Sbjct: 488 KKTIIVTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDG-SLRILNASKSDE 546

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEI 157
           G Y C   N  G A+  +  LSV       + P+       E++   CKA      +   
Sbjct: 547 GKYVCRGENVFGSAEIIA-SLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 605

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          + R +     + I N+     G YGC
Sbjct: 606 YWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGC 650


>gi|120659964|gb|AAI30620.1| CNTN5 protein [Homo sapiens]
          Length = 1100

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 164/611 (26%), Positives = 263/611 (43%), Gaps = 49/611 (8%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           A +   V++ C   G P+P   W K    +P     R SQ      L I +V+  D G Y
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQA----VLEIPNVQLDDAGIY 367

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C   N  G+  S+   L V   P++  +           + +ECKA+G P P   W+ N
Sbjct: 368 ECRAENSRGK-NSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKN 426

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--E 220
           G P+S   P  R ++    + I N+ +SD G Y C A N  G +Y    + +LA AP   
Sbjct: 427 GVPLS---PQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFA 483

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
           + +  K       + VV+ C+  G+PKP ++W    + +    R  IL  G L+I + + 
Sbjct: 484 LNQLKKTIIVTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASK 543

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           +D G+Y C   N  G+A+   SL+VKE T I   P+  E+  G+S    C A+ D SL +
Sbjct: 544 SDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 603

Query: 340 SIVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +  W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A
Sbjct: 604 TFYWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEA 663

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKD 447
            L V+ P   P    +++ I    A +SW+P +          Y +Q        W    
Sbjct: 664 ELLVRGP-PGPPGIVIVEEITESTATLSWSPAADN--HSPISSYNLQARSPFSLGWQTVK 720

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGT 506
              ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T
Sbjct: 721 ---TVPEIITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKT 775

Query: 507 VQSLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISD 561
             +  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+
Sbjct: 776 APTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSE 830

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPN 616
            +    +   + P T + + +  Y   GDG  S+ +        P   P +V+    + +
Sbjct: 831 ASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVS 890

Query: 617 NLVISWTAMPE 627
            ++++W  + E
Sbjct: 891 EILVAWKHIKE 901



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 160/650 (24%), Positives = 241/650 (37%), Gaps = 76/650 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + A
Sbjct: 253 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 312

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I N++  D G Y 
Sbjct: 313 AKGTTVKMECFALGNPVPTITWMKVNG----YIPSKARLRKSQAVLEIPNVQLDDAGIYE 368

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V  + P   E   D     G  +   C+  G P+P   W+ N 
Sbjct: 369 CRAENSRGKNSFRGQLQVYTY-PHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG 427

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITDQ 313
             L+      +  G L I +V  +D+G Y C A NK G    S  L +        +   
Sbjct: 428 VPLSPQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQL 487

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +   V   Q     C     P  K +I W +G   +      R     D SL +  +S+
Sbjct: 488 KKTIIVTKDQEVVIECKPQGSP--KPTISWKKGDRAV--RENKRIAILPDGSLRILNASK 543

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI----------QVIDAKKAV 420
            D G+Y CR +      E  A+L+V+ P      P    L            + DA   V
Sbjct: 544 SDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 603

Query: 421 VSW-----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
             +      P+  +   GHF   + Q       +  IR +++         V     +  
Sbjct: 604 TFYWTLKGQPIDFEEEGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQTTADSVS 660

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
           + A +L       GPP          G PG V   E   +  S   L W      +  + 
Sbjct: 661 DEAELLV-----RGPP----------GPPGIVIVEE---ITESTATLSWSPAADNHSPIS 702

Query: 536 GYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y ++ +S     +G   ++ +P I      SA    L P  +Y   +      G G  S
Sbjct: 703 SYNLQARS--PFSLGWQTVKTVPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPS 760

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P NV GR    + LVI+W  + E   N   F Y + +R + T  
Sbjct: 761 TPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT-R 819

Query: 649 AWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
            W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V
Sbjct: 820 GWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVV 867



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 149/394 (37%), Gaps = 39/394 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           KKV L C   G P+P   W ++G  I+  SD       G  +I    E  D G Y C  +
Sbjct: 117 KKVALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLAT 176

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N VG   S    L       F+      ++  E + V   C      PE    WV N  P
Sbjct: 177 NTVGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 236

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
            S    + RR +      + I  ++ SD G+Y C   N++                  V 
Sbjct: 237 -SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVM 295

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            +    +  H P    A K      G TV + C   G P P + W+     +        
Sbjct: 296 GEYEPKIEVHFPFTVTAAK------GTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK 349

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               L+I +V   D+G Y C A N  G     G L V  + H  ++  D ++++G    +
Sbjct: 350 SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRW 409

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  + +  WL+   P+  +S    V      L +   ++ D+G Y C A+ + 
Sbjct: 410 ECKATGKP--RPTYRWLKNGVPLSPQSRVEMVNG---VLMIHNVNQSDAGMYQCLAENKY 464

Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
             I A A L +   L +   F L Q+   KK ++
Sbjct: 465 GAIYASAELKI---LASAPTFALNQL---KKTII 492



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 125/297 (42%), Gaps = 35/297 (11%)

Query: 113 AKSYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
           + ++  D SV   P F  EP+   F   ++E+ V   C+  G P P   W+ NG  I   
Sbjct: 86  SDAFKQDESVDYGPVFVQEPDDIIFPTDSDEKKVALNCEVRGNPVPSYRWLRNGTEI-DL 144

Query: 170 PPNPRRKVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
             + R  +      I N  ++ D+G+Y C ATN++G +         A+    +   +  
Sbjct: 145 ESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNTVGSILSREATLQFAYLGNFSGRTRSA 204

Query: 229 YTV-DGKTVVLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVA 278
            +V +G+ VVL C    +P P       +W+ N+          R+   ETG+L I+ V 
Sbjct: 205 VSVREGQGVVLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQ 260

Query: 279 FADSGEYTCFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATF 327
            +D G Y C  +N +  A+       LT++    + +     EV          G +   
Sbjct: 261 TSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKM 320

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
            C A+ +P    +I W++ +  I  ++  R  Q+    L +      D+G Y CRA+
Sbjct: 321 ECFALGNPV--PTITWMKVNGYIPSKARLRKSQA---VLEIPNVQLDDAGIYECRAE 372



 Score = 46.2 bits (108), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  ++++V + C   G+P P   W K    +  + RI+    G SL I +   SD+
Sbjct: 488 KKTIIVTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDG-SLRILNASKSDE 546

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEI 157
           G Y C   N  G A+  +  LSV       + P+       E++   CKA      +   
Sbjct: 547 GKYVCRGENVFGSAEIIA-SLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 605

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          + R +     + I N+     G YGC
Sbjct: 606 YWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGC 650


>gi|332207987|ref|XP_003253076.1| PREDICTED: contactin-5 isoform 1 [Nomascus leucogenys]
 gi|332207989|ref|XP_003253077.1| PREDICTED: contactin-5 isoform 2 [Nomascus leucogenys]
          Length = 1100

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 164/611 (26%), Positives = 263/611 (43%), Gaps = 49/611 (8%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           A +   V++ C   G P+P   W K    +P     R SQ      L I +V+  D G Y
Sbjct: 312 AAKGTTVKVECFALGNPVPTITWMKVNGYIPSKARLRKSQA----VLEIPNVQLDDAGIY 367

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C   N  G+  S+   L V   P++  +           + +ECKA+G P P   W+ N
Sbjct: 368 ECRAENSRGK-NSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKN 426

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--E 220
           G P+S   P  R ++    + I N+ +SD G Y C A N  G +Y    + +LA AP   
Sbjct: 427 GVPLS---PQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFA 483

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
           + +  K       + VV+ C+  G+PKP ++W    + +    R  IL  G L+I + + 
Sbjct: 484 LNQLKKTIIVTKDREVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASK 543

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           +D G+Y C   N  G+A+   SL+VKE T I   P+  E+  G+S    C A+ D SL +
Sbjct: 544 SDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 603

Query: 340 SIVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +  W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A
Sbjct: 604 TFYWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEA 663

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKD 447
            L V+ P   P    +++ I    A +SW+P +          Y +Q        W    
Sbjct: 664 ELLVRGP-PGPPGIVIVEEITESTATLSWSPAADN--HSPISSYNLQARSPFSLGWQTVK 720

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGT 506
              ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T
Sbjct: 721 ---TVPEIITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKT 775

Query: 507 VQSLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISD 561
             +  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+
Sbjct: 776 APTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSE 830

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPN 616
            +    +   + P T + + +  Y   GDG  S+ +        P   P +V+    + +
Sbjct: 831 ASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVS 890

Query: 617 NLVISWTAMPE 627
            ++++W  + E
Sbjct: 891 EILVAWKHIKE 901



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 159/650 (24%), Positives = 241/650 (37%), Gaps = 76/650 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + A
Sbjct: 253 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 312

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I N++  D G Y 
Sbjct: 313 AKGTTVKVECFALGNPVPTITWMKVNG----YIPSKARLRKSQAVLEIPNVQLDDAGIYE 368

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V  + P   E   D     G  +   C+  G P+P   W+ N 
Sbjct: 369 CRAENSRGKNSFRGQLQVYTY-PHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG 427

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITDQ 313
             L+      +  G L I +V  +D+G Y C A NK G    S  L +        +   
Sbjct: 428 VPLSPQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQL 487

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +   V   +     C     P  K +I W +G   +      R     D SL +  +S+
Sbjct: 488 KKTIIVTKDREVVIECKPQGSP--KPTISWKKGDRAV--RENKRIAILPDGSLRILNASK 543

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI----------QVIDAKKAV 420
            D G+Y CR +      E  A+L+V+ P      P    L            + DA   V
Sbjct: 544 SDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 603

Query: 421 VSW-----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
             +      P+  +   GHF   + Q       +  IR +++         V     +  
Sbjct: 604 TFYWTLKGQPIDFEEEGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQTTADSVS 660

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
           + A +L       GPP          G PG V   E   +  S   L W      +  + 
Sbjct: 661 DEAELLV-----RGPP----------GPPGIVIVEE---ITESTATLSWSPAADNHSPIS 702

Query: 536 GYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y ++ +S     +G   ++ +P I      SA    L P  +Y   +      G G  S
Sbjct: 703 SYNLQARS--PFSLGWQTVKTVPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPS 760

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P NV GR    + LVI+W  + E   N   F Y + +R + T  
Sbjct: 761 TPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT-R 819

Query: 649 AWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
            W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V
Sbjct: 820 GWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVV 867



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 149/394 (37%), Gaps = 39/394 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           KKV L C   G P+P   W ++G  I+  SD       G  +I    E  D G Y C  +
Sbjct: 117 KKVALNCEVRGNPIPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLAT 176

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N +G   S    L       F+      ++  E + V   C      PE    WV N  P
Sbjct: 177 NTLGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 236

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
            S    + RR +      + I  ++ SD G+Y C   N++                  V 
Sbjct: 237 -SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVM 295

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            +    +  H P    A K      G TV + C   G P P + W+     +        
Sbjct: 296 GEYEPKIEVHFPFTVTAAK------GTTVKVECFALGNPVPTITWMKVNGYIPSKARLRK 349

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               L+I +V   D+G Y C A N  G     G L V  + H  ++  D ++++G    +
Sbjct: 350 SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRW 409

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  + +  WL+   P+  +S    V      L +   ++ D+G Y C A+ + 
Sbjct: 410 ECKATGKP--RPTYRWLKNGVPLSPQSRVEMVNG---VLMIHNVNQSDAGMYQCLAENKY 464

Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
             I A A L +   L +   F L Q+   KK ++
Sbjct: 465 GAIYASAELKI---LASAPTFALNQL---KKTII 492



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 125/297 (42%), Gaps = 35/297 (11%)

Query: 113 AKSYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
           + ++  D SV   P F  EP+   F   ++E+ V   C+  G P P   W+ NG  I   
Sbjct: 86  SDAFKQDESVDYGPVFVQEPDDIIFPTDSDEKKVALNCEVRGNPIPSYRWLRNGTEI-DL 144

Query: 170 PPNPRRKVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
             + R  +      I N  ++ D+G+Y C ATN+LG +         A+    +   +  
Sbjct: 145 ESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNTLGSILSREATLQFAYLGNFSGRTRSA 204

Query: 229 YTV-DGKTVVLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVA 278
            +V +G+ VVL C    +P P       +W+ N+          R+   ETG+L I+ V 
Sbjct: 205 VSVREGQGVVLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQ 260

Query: 279 FADSGEYTCFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATF 327
            +D G Y C  +N +  A+       LT++    + +     EV          G +   
Sbjct: 261 TSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKV 320

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
            C A+ +P    +I W++ +  I  ++  R  Q+    L +      D+G Y CRA+
Sbjct: 321 ECFALGNPV--PTITWMKVNGYIPSKARLRKSQA---VLEIPNVQLDDAGIYECRAE 372



 Score = 47.0 bits (110), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  ++++V + C   G+P P   W K    +  + RI+    G SL I +   SD+
Sbjct: 488 KKTIIVTKDREVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDG-SLRILNASKSDE 546

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEI 157
           G Y C   N  G A+  +  LSV       + P+       E++   CKA      +   
Sbjct: 547 GKYVCRGENVFGSAEIIA-SLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 605

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          + R +     + I N+     G YGC
Sbjct: 606 YWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGC 650


>gi|348514832|ref|XP_003444944.1| PREDICTED: contactin-4-like [Oreochromis niloticus]
          Length = 1003

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 181/722 (25%), Positives = 302/722 (41%), Gaps = 92/722 (12%)

Query: 47  RNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           ++  V+L C   G P+P   W K DG     + ++        L I + +  D G Y C 
Sbjct: 217 KSSTVKLECFALGNPVPTISWKKVDGASF--TRKVDINKASGVLEIPYFQQEDAGMYECV 274

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             N  G+  S    LS  AAP+FT +P+ +    +ET+ +ECKASG P+P   W+ NG+P
Sbjct: 275 AENSRGK-NSVKGKLSYYAAPHFTEKPQDVQKTIDETLVWECKASGKPKPSYRWLKNGEP 333

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +   P   R +V    +TI +L  +D G + C A N  G ++ +  + V+A AP+ ++  
Sbjct: 334 LD--PMEDRVQVNNGVLTISSLNLADIGMFQCVAENKHGRIFTNAELRVVAIAPDFSQNL 391

Query: 226 KDEYTV--DGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADS 282
               T+   G  V++ C+   +P+  ++W   ++ L    R  +L+ G L+I++V+  D+
Sbjct: 392 LKAQTLARQGGDVLIECKPKMSPRGMISWRKGKEALRESHRVMVLDNGSLRISNVSKTDA 451

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC ARN+ G A  +GSL VKE T IT      +V  G+S    C    DP+L L   
Sbjct: 452 GMYTCVARNQFGVASSAGSLLVKEATVITSPAGHLDVTVGESIVLPCQVSHDPTLDLKFT 511

Query: 343 WLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           W    + I F S   +      Q +D  + +       +G+YTC  QT++D +     + 
Sbjct: 512 WFFNEQLIHFGSHGAYFEKVGGQRSDGDIMIRNIQLRHAGKYTCAVQTKVDSVSIATDVV 571

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSIR 453
           V+ P   P +  + ++ +   A +SW P S          Y +Q  T          ++ 
Sbjct: 572 VRGPPGPPVDCQVTKMTET-TASLSWGPGSDN--HSPILSYTIQARTPFSLGWQAVTTVP 628

Query: 454 ELIVNKGES-TTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTPEGV 503
           EL+  K  S T T++  +V       RVLA N    G PS         + +  VTP  V
Sbjct: 629 ELLGGKQLSATVTDLSSWVDYE---FRVLATNSIGTGEPSKPSKKARTKDTLPRVTPARV 685

Query: 504 PGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
            G            S   + W  V  E  +G   GY + ++ +        ++      D
Sbjct: 686 SGGGGG-------RSELVITWEPVPEEMQSGPGFGYVVAFRPLGAQG---WMQAAVTSPD 735

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPN 616
            +    K   + P + Y++ +  Y   G+G  S           P + P  +  R  + +
Sbjct: 736 ASRYVFKNESIPPFSPYQVKVGVYNNKGEGPFSPVTTIYSAEEEPSRAPGRLRARSVSAS 795

Query: 617 NLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEI 676
            + ++W  +P                       W+               N+     YE+
Sbjct: 796 EVEVTWKPLP-----------------------WSN--------------NRRRILGYEL 818

Query: 677 KVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 736
              Q W+EK  + +   +I   G  T+  +     +S  +  + A+N A  GP S I++ 
Sbjct: 819 ---QYWSEKQKQEAA-TVIRTAGNKTSVLIRDLEGSSTYYVCLRAYNSAGVGPQSNIVNV 874

Query: 737 VT 738
            T
Sbjct: 875 TT 876



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 163/635 (25%), Positives = 237/635 (37%), Gaps = 78/635 (12%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVG----EAKSYSIDLSVLAA-----PYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V     E     + L V        P   V+ PE +  
Sbjct: 156 NLYIAKVEPSDVGNYTCVVTNTVTKSSVEGPPTPLVLRVDGVMGEYEPKIEVQFPEVVPV 215

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR----ITIENLRKSDTG 193
           A+  TV  EC A G P P I W    K +  A  +  RKV  N+    + I   ++ D G
Sbjct: 216 AKSSTVKLECFALGNPVPTISW----KKVDGA--SFTRKVDINKASGVLEIPYFQQEDAG 269

Query: 194 NYGCNATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVN 251
            Y C A NS G   K+     L++  AP  TE P+D      +T+V  C+  G PKP   
Sbjct: 270 MYECVAENSRG---KNSVKGKLSYYAAPHFTEKPQDVQKTIDETLVWECKASGKPKPSYR 326

Query: 252 WIHNQKELTGGRYTI-LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
           W+ N + L      + +  G L I+ +  AD G + C A NK G    +  L V      
Sbjct: 327 WLKNGEPLDPMEDRVQVNNGVLTISSLNLADIGMFQCVAENKHGRIFTNAELRVVAIAPD 386

Query: 311 TDQ---PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
             Q           G      C     P   +S  W +G E +  ES    V  N  SL 
Sbjct: 387 FSQNLLKAQTLARQGGDVLIECKPKMSPRGMIS--WRKGKEALR-ESHRVMVLDNG-SLR 442

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV----VSW 423
           ++  S+ D+G YTC A+ +     +  +L V+      S    + V   +  V    VS 
Sbjct: 443 ISNVSKTDAGMYTCVARNQFGVASSAGSLLVKEATVITSPAGHLDVTVGESIVLPCQVSH 502

Query: 424 NPVSPQSLRGHFRGYKVQ-----TWTEK------DGEGSIRELIVNKGESTTTEVDKFVP 472
           +P         F    +       + EK      DG+  IR + +      T  V   V 
Sbjct: 503 DPTLDLKFTWFFNEQLIHFGSHGAYFEKVGGQRSDGDIMIRNIQLRHAGKYTCAVQTKVD 562

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
           +                    I + V   G PG     +   +  +   L W      + 
Sbjct: 563 S------------------VSIATDVVVRGPPGPPVDCQVTKMTETTASLSWGPGSDNHS 604

Query: 533 VLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            ++ Y I  Q+     +G   +  +P +      SA +  L     Y   +      G G
Sbjct: 605 PILSYTI--QARTPFSLGWQAVTTVPELLGGKQLSATVTDLSSWVDYEFRVLATNSIGTG 662

Query: 592 AESK------YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
             SK          +P   P  V G G   + LVI+W  +PE   + P F Y + +R   
Sbjct: 663 EPSKPSKKARTKDTLPRVTPARVSGGGGGRSELVITWEPVPEEMQSGPGFGYVVAFRPLG 722

Query: 646 TGEAWNQDDVLDWRQSELVLANQ--PTFQPYEIKV 678
             + W Q  V     S  V  N+  P F PY++KV
Sbjct: 723 -AQGWMQAAVTSPDASRYVFKNESIPPFSPYQVKV 756



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 137/649 (21%), Positives = 244/649 (37%), Gaps = 94/649 (14%)

Query: 2   VWQSRSEYKIGNRIL----LNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIF 57
           ++Q  +E K G RI     L V+A     SQN        + + + +A +   V + C  
Sbjct: 360 MFQCVAENKHG-RIFTNAELRVVAIAPDFSQN--------LLKAQTLARQGGDVLIECKP 410

Query: 58  GGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYS 117
             +P     W K    +  S R+   + G SL I +V  +D G YTC   N  G A S  
Sbjct: 411 KMSPRGMISWRKGKEALRESHRVMVLDNG-SLRISNVSKTDAGMYTCVARNQFGVASSAG 469

Query: 118 IDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--WVHNGKPISQAPPNPR- 174
             L V  A   T     ++    E++   C+ S  P  ++   W  N + I         
Sbjct: 470 -SLLVKEATVITSPAGHLDVTVGESIVLPCQVSHDPTLDLKFTWFFNEQLIHFGSHGAYF 528

Query: 175 RKVGPNR----ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP-------EITE 223
            KVG  R    I I N++    G Y C     +  V   +  +V+   P       ++T+
Sbjct: 529 EKVGGQRSDGDIMIRNIQLRHAGKYTCAVQTKVDSV--SIATDVVVRGPPGPPVDCQVTK 586

Query: 224 APKDEYTV------DGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKIT 275
             +   ++      D  + +L+  +       + W  +    EL GG+          +T
Sbjct: 587 MTETTASLSWGPGSDNHSPILSYTIQARTPFSLGWQAVTTVPELLGGKQL-----SATVT 641

Query: 276 DVAFADSGEYTCFARNKLGT---------------------AQGSGSLTVKEHTHITDQP 314
           D++     E+   A N +GT                     A+ SG    +    IT +P
Sbjct: 642 DLSSWVDYEFRVLATNSIGTGEPSKPSKKARTKDTLPRVTPARVSGGGGGRSELVITWEP 701

Query: 315 EDYEVEAGQS----ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTK 370
              E+++G        FR              W++ +  +      R+V  N+ S+    
Sbjct: 702 VPEEMQSGPGFGYVVAFRPLGAQG--------WMQAA--VTSPDASRYVFKNE-SIPPFS 750

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQS 430
             ++  G Y  + +     +    +   + P  AP      + + A +  V+W P+   +
Sbjct: 751 PYQVKVGVYNNKGEGPFSPVTTIYSAEEE-PSRAPGRLRA-RSVSASEVEVTWKPLPWSN 808

Query: 431 LRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGP 490
            R    GY++Q W+EK  + +   +I   G  T+  +     +S  +  + A+N A  GP
Sbjct: 809 NRRRILGYELQYWSEKQKQEAA-TVIRTAGNKTSVLIRDLEGSSTYYVCLRAYNSAGVGP 867

Query: 491 PSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTK 548
            S I++  T +  P            +S   LKW  V   +    + GYK+ Y   K ++
Sbjct: 868 QSNIVNVTTKKPPPSQAPVKIMWNTSNSKVILKWDQVHALENESEVTGYKVMYSQDKHSR 927

Query: 549 VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL 597
                   P + +   TS +L+ L  +  Y I +  +++ G+G  S+ +
Sbjct: 928 --------PNVVETNNTSLELS-LPVNQGYVIQIKPFSEGGEGISSRQI 967



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 106/266 (39%), Gaps = 35/266 (13%)

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRK-SDTGNYGCNATN 201
           V F C+A G P P   W  N   I+  P +    +G N + I +L K  D G Y C A+N
Sbjct: 22  VVFSCEAQGHPPPFYRWKLNDSFITPRPGSRYSLMGGN-LHIAHLNKEEDVGIYQCMASN 80

Query: 202 SLG-YVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE-----VNWIHN 255
           S G  V ++  ++V       T+        +G+ VVL C     P P        WI N
Sbjct: 81  SFGTIVSREASLHVAYLENFKTQRRSPVRVREGQGVVLLC----GPPPHSGELSFTWIFN 136

Query: 256 QKE----LTGGRYTILETGDLKITDVAFADSGEYTCFARNKL--GTAQGSGSLTVKEHTH 309
           +          R+   +TG+L I  V  +D G YTC   N +   + +G  +  V     
Sbjct: 137 EHPSYVIQDTRRFVSQKTGNLYIAKVEPSDVGNYTCVVTNTVTKSSVEGPPTPLVLRVDG 196

Query: 310 ITDQ---------PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQ 360
           +  +         PE   V    +    C A+ +P   +S  W +    +D  S  R V 
Sbjct: 197 VMGEYEPKIEVQFPEVVPVAKSSTVKLECFALGNPVPTIS--WKK----VDGASFTRKVD 250

Query: 361 SNDYS--LTVTKSSELDSGQYTCRAQ 384
            N  S  L +    + D+G Y C A+
Sbjct: 251 INKASGVLEIPYFQQEDAGMYECVAE 276


>gi|296474989|tpg|DAA17104.1| TPA: cell adhesion molecule with homology to L1CAM (close homolog
           of L1)-like [Bos taurus]
          Length = 1225

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 188/714 (26%), Positives = 310/714 (43%), Gaps = 70/714 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+   + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V   D+G+Y C 
Sbjct: 269 LKGDTLLLECFAEGLPTPQVDWNKMGGDL-PKGRETKENYGKTLKIENVSSQDKGTYRCT 327

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   ++V   P++T +P+    +   +    C+A G PEP I W  NG P
Sbjct: 328 ASNVLGSA-THDFQVTVEEPPHWTKKPQSGVYSTGSSGILLCEAEGEPEPTIKWRVNGLP 386

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           I + P +    + P  I+  N++ + T  Y C ATN  G +  +  ++VL   P I  A 
Sbjct: 387 IERNPYS-GDVMSPGEISFTNVQPNHTAVYQCEATNVHGTILANANIDVLDVRPLIQTAD 445

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
           ++ Y TV G +  L C  F +P+  V+W  +   K L G RY + E G L+IT+    D+
Sbjct: 446 EENYATVVGYSAFLHCEFFASPEAIVSWQKVEEAKPLDGRRYHVHENGTLQITETTEEDA 505

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N  G    + +L ++  T +   P++  V    +    C +  D  LK  L 
Sbjct: 506 GSYSCWVENAKGKTAVTANLDIRNATSLRVSPKNPRVPKSHTLELHCESQCDSHLKYSLK 565

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y+C A T LD +     +TV 
Sbjct: 566 LSWSKDGEAFEMNGTEDGRIIIDGANLTISNVTMEDEGIYSCSAHTALDSVADMTQVTVL 625

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +      +   Y V+    K+  G   EL   +
Sbjct: 626 DVPDPPENLHLSERQN-RSVRLTWE--AGDDHNSNISEYIVEFEGNKEEPGRWEELTRVQ 682

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  V    P  +   RV+A N      PS       TP   P    Q++       
Sbjct: 683 GKETTV-VLSLAPYVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQP 741

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 742 KEMIIKWEPLKAMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 792

Query: 576 T--KYRIHLAGYTKAGDGAESK-YLFYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +      G G E +  + Y     PD    ++G     + LV ++W+ +P+ 
Sbjct: 793 VYAPYDVQVQAINHLGSGPEPQSVILYSGEDYPDAAPVIQGVDVINSTLVKVTWSTIPK- 851

Query: 629 EHNAPHFK-YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDG 687
           E    H K Y++ W        W    +LD R             P E+ +++   ++D 
Sbjct: 852 ERVHGHLKGYQVNW--------WKTKSLLDGRT-----------HPKEVNILRFSGQRD- 891

Query: 688 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
            G +  L            D F   S+    VLA+N    GP SE   F TPEG
Sbjct: 892 YGMVPSL------------DAF---SEFHLTVLAYNSKGAGPESEPFIFQTPEG 930



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 143/655 (21%), Positives = 255/655 (38%), Gaps = 85/655 (12%)

Query: 54  FCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113
           +C F   P  +TI  K  + +  +             +KHV  S   +     +N + + 
Sbjct: 202 YCCFAAFPRLRTIVQKMPMKLTVNS------------LKHVNDSSSSTEIISKANSIKQR 249

Query: 114 KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           K       +L  P  +    F+   + +T+  EC A GLP P++ W   G  + +     
Sbjct: 250 KP-----RLLLPPPESGSESFVTILKGDTLLLECFAEGLPTPQVDWNKMGGDLPKG---- 300

Query: 174 RRKVGPN---RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
            R+   N    + IEN+   D G Y C A+N LG    D  V V    P  T+ P+    
Sbjct: 301 -RETKENYGKTLKIENVSSQDKGTYRCTASNVLGSATHDFQVTV-EEPPHWTKKPQSGVY 358

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCF 288
             G + +L C   G P+P + W  N   +    Y+  ++  G++  T+V    +  Y C 
Sbjct: 359 STGSSGILLCEAEGEPEPTIKWRVNGLPIERNPYSGDVMSPGEISFTNVQPNHTAVYQCE 418

Query: 289 ARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           A N  GT   + ++ V +   +  T   E+Y    G SA   C   + P   +S   +  
Sbjct: 419 ATNVHGTILANANIDVLDVRPLIQTADEENYATVVGYSAFLHCEFFASPEAIVSWQKVEE 478

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPS 406
           ++P+D     R+    + +L +T+++E D+G Y+C  +         A L ++       
Sbjct: 479 AKPLDGR---RYHVHENGTLQITETTEEDAGSYSCWVENAKGKTAVTANLDIR------- 528

Query: 407 NFTLIQVIDAKKAVVSWNPVSPQS----------LRGHFRGYKVQTWTEKDGEG------ 450
           N T ++V          NP  P+S             H +     +W+ KDGE       
Sbjct: 529 NATSLRVSPK-------NPRVPKSHTLELHCESQCDSHLKYSLKLSWS-KDGEAFEMNGT 580

Query: 451 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSL 510
               +I++    T + V        + +   A +   +      ++ VT   VP   ++L
Sbjct: 581 EDGRIIIDGANLTISNVTMEDEGIYSCSAHTALDSVAD------MTQVTVLDVPDPPENL 634

Query: 511 EAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP-LLERLPYISDPTTTSAKL 569
                 + +  L W   +  N  +  Y ++++   G K  P   E L  +    TT   +
Sbjct: 635 HLSERQNRSVRLTWEAGDDHNSNISEYIVEFE---GNKEEPGRWEELTRVQGKETTV--V 689

Query: 570 AGLEPSTKYRIHLAGYTKAGDGAESKYLFY------VPFKNPDNVEGRGSTPNNLVISWT 623
             L P  +Y+  +    + G    S    +       P KNP N+  + S P  ++I W 
Sbjct: 690 LSLAPYVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWE 749

Query: 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            +  +E N P  +YR+ W+       W ++ V +     L +     + PY+++V
Sbjct: 750 PLKAMEQNGPGLEYRVTWKPQGAPVEWEEETVTN---HTLRVMTPAVYAPYDVQV 801



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 137/575 (23%), Positives = 236/575 (41%), Gaps = 51/575 (8%)

Query: 53   LFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L C F  +P     W K  +  P++   R    +   +L I      D GSY+C V N  
Sbjct: 459  LHCEFFASPEAIVSWQKVEEAKPLD--GRRYHVHENGTLQITETTEEDAGSYSCWVENAK 516

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA---SGLP-EPEIHWVHNGKPI 166
            G+  + + +L +  A    V P+     +  T+   C++   S L    ++ W  +G+  
Sbjct: 517  GKT-AVTANLDIRNATSLRVSPKNPRVPKSHTLELHCESQCDSHLKYSLKLSWSKDGEAF 575

Query: 167  SQ-APPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
                  + R  +    +TI N+   D G Y C+A  +L  V     V VL    ++ + P
Sbjct: 576  EMNGTEDGRIIIDGANLTISNVTMEDEGIYSCSAHTALDSVADMTQVTVL----DVPDPP 631

Query: 226  KDEYTVD--GKTVVLTCRVFGAPKPE-----VNWIHNQKELTGGRYTILETGDLKITDVA 278
            ++ +  +   ++V LT               V +  N++E   GR+  L     K T V 
Sbjct: 632  ENLHLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEE--PGRWEELTRVQGKETTVV 689

Query: 279  FADSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSAT------ 326
             + +     ++   A N++G +Q S      E         P++  V+A Q         
Sbjct: 690  LSLAPYVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWE 749

Query: 327  -FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
              +    + P L+  + W     P+++E E       +++L V   +         +A  
Sbjct: 750  PLKAMEQNGPGLEYRVTWKPQGAPVEWEEE----TVTNHTLRVMTPAVYAPYDVQVQAIN 805

Query: 386  ELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKAVVSWNPVSPQSLRGHFRGYKVQT 442
             L       ++ +    + P    +IQ   VI++    V+W+ +  + + GH +GY+V  
Sbjct: 806  HLGSGPEPQSVILYSGEDYPDAAPVIQGVDVINSTLVKVTWSTIPKERVHGHLKGYQVNW 865

Query: 443  WTEK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
            W  K   DG    +E+ + +  G+     V      S+    VLA+N    GP SE   F
Sbjct: 866  WKTKSLLDGRTHPKEVNILRFSGQRDYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPFIF 925

Query: 498  VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERL 556
             TPEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T ++G L +  
Sbjct: 926  QTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGNLTGYLLQYQIINDTDEIGELNDI- 984

Query: 557  PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
              I+ P+  S +L  L  +TKY+ +L   T  G G
Sbjct: 985  -NITTPSKPSWRLLNLSATTKYKFYLRACTSKGCG 1018



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 157/395 (39%), Gaps = 62/395 (15%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSD-RISQGNYGKSLIIK---HVEFSDQGSYTCEVS 107
           ++ C+  G P P+ +W+KD  P N SD RI   N G +  I    H+    QG Y C  S
Sbjct: 54  QIECVAKGNPEPKFLWNKDDKPFNLSDPRIIVSNNGGTFRIPNDGHISHF-QGKYRCFAS 112

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGK 164
           N +G A S  I+  V  AP F  E  + +   E + +   C    GLP   I+W++   +
Sbjct: 113 NKLGIAMSEEIEFIVPNAPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELE 172

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA 218
            I Q       + G   +   N+ + D+ N Y C A        +  +   + VN L H 
Sbjct: 173 HIEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHV 230

Query: 219 --------------------PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNW 252
                               P +   P +  +      + G T++L C   G P P+V+W
Sbjct: 231 NDSSSSTEIISKANSIKQRKPRLLLPPPESGSESFVTILKGDTLLLECFAEGLPTPQVDW 290

Query: 253 IHNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT 311
                +L  GR T    G  LKI +V+  D G Y C A N LG+A     +TV+E  H T
Sbjct: 291 NKMGGDLPKGRETKENYGKTLKIENVSSQDKGTYRCTASNVLGSATHDFQVTVEEPPHWT 350

Query: 312 DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKS 371
            +P+      G S    C A  +P  + +I W     PI         + N YS  V   
Sbjct: 351 KKPQSGVYSTGSSGILLCEAEGEP--EPTIKWRVNGLPI---------ERNPYSGDVMSP 399

Query: 372 SELD--------SGQYTCRAQTELDFIEAQATLTV 398
            E+         +  Y C A      I A A + V
Sbjct: 400 GEISFTNVQPNHTAVYQCEATNVHGTILANANIDV 434



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 119/311 (38%), Gaps = 51/311 (16%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN----RITIENLRKSDTGNY 195
           +E    EC A G PEP+  W  + KP + +  +PR  V  N    RI  +       G Y
Sbjct: 50  DEYFQIECVAKGNPEPKFLWNKDDKPFNLS--DPRIIVSNNGGTFRIPNDGHISHFQGKY 107

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A+N LG    +    ++ +AP+  +   D   V +G  +VL C    G P   + W+
Sbjct: 108 RCFASNKLGIAMSEEIEFIVPNAPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWM 167

Query: 254 HNQKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEH 307
           + + E      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV   
Sbjct: 168 NIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSL 227

Query: 308 THITDQPEDYEVEA-----------------------------GQSATFRCNAVSDPSLK 338
            H+ D     E+ +                             G +    C A   P+ +
Sbjct: 228 KHVNDSSSSTEIISKANSIKQRKPRLLLPPPESGSESFVTILKGDTLLLECFAEGLPTPQ 287

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           +    + G  P   E++  + +    +L +   S  D G Y C A   L      AT   
Sbjct: 288 VDWNKMGGDLPKGRETKENYGK----TLKIENVSSQDKGTYRCTASNVL----GSATHDF 339

Query: 399 QVPLEAPSNFT 409
           QV +E P ++T
Sbjct: 340 QVTVEEPPHWT 350


>gi|343168759|ref|NP_001230200.1| contactin-5 isoform 3 precursor [Homo sapiens]
          Length = 911

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 164/611 (26%), Positives = 263/611 (43%), Gaps = 49/611 (8%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           A +   V++ C   G P+P   W K    +P     R SQ      L I +V+  D G Y
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQA----VLEIPNVQLDDAGIY 367

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C   N  G+  S+   L V   P++  +           + +ECKA+G P P   W+ N
Sbjct: 368 ECRAENSRGK-NSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKN 426

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--E 220
           G P+S   P  R ++    + I N+ +SD G Y C A N  G +Y    + +LA AP   
Sbjct: 427 GVPLS---PQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFA 483

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
           + +  K       + VV+ C+  G+PKP ++W    + +    R  IL  G L+I + + 
Sbjct: 484 LNQLKKTIIVTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASK 543

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           +D G+Y C   N  G+A+   SL+VKE T I   P+  E+  G+S    C A+ D SL +
Sbjct: 544 SDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 603

Query: 340 SIVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +  W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A
Sbjct: 604 TFYWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEA 663

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKD 447
            L V+ P   P    +++ I    A +SW+P +          Y +Q        W    
Sbjct: 664 ELLVRGP-PGPPGIVIVEEITESTATLSWSPAADN--HSPISSYNLQARSPFSLGWQTVK 720

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGT 506
              ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T
Sbjct: 721 ---TVPEIITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKT 775

Query: 507 VQSLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISD 561
             +  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+
Sbjct: 776 APTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSE 830

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPN 616
            +    +   + P T + + +  Y   GDG  S+ +        P   P +V+    + +
Sbjct: 831 ASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVS 890

Query: 617 NLVISWTAMPE 627
            ++++W  + E
Sbjct: 891 EILVAWKHIKE 901



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 160/650 (24%), Positives = 241/650 (37%), Gaps = 76/650 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + A
Sbjct: 253 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 312

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I N++  D G Y 
Sbjct: 313 AKGTTVKMECFALGNPVPTITWMKVNG----YIPSKARLRKSQAVLEIPNVQLDDAGIYE 368

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V  + P   E   D     G  +   C+  G P+P   W+ N 
Sbjct: 369 CRAENSRGKNSFRGQLQVYTY-PHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG 427

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITDQ 313
             L+      +  G L I +V  +D+G Y C A NK G    S  L +        +   
Sbjct: 428 VPLSPQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQL 487

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +   V   Q     C     P  K +I W +G   +      R     D SL +  +S+
Sbjct: 488 KKTIIVTKDQEVVIECKPQGSP--KPTISWKKGDRAV--RENKRIAILPDGSLRILNASK 543

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI----------QVIDAKKAV 420
            D G+Y CR +      E  A+L+V+ P      P    L            + DA   V
Sbjct: 544 SDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 603

Query: 421 VSW-----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
             +      P+  +   GHF   + Q       +  IR +++         V     +  
Sbjct: 604 TFYWTLKGQPIDFEEEGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQTTADSVS 660

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
           + A +L       GPP          G PG V   E   +  S   L W      +  + 
Sbjct: 661 DEAELLV-----RGPP----------GPPGIVIVEE---ITESTATLSWSPAADNHSPIS 702

Query: 536 GYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y ++ +S     +G   ++ +P I      SA    L P  +Y   +      G G  S
Sbjct: 703 SYNLQARS--PFSLGWQTVKTVPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPS 760

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P NV GR    + LVI+W  + E   N   F Y + +R + T  
Sbjct: 761 TPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT-R 819

Query: 649 AWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
            W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V
Sbjct: 820 GWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVV 867



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 149/394 (37%), Gaps = 39/394 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           KKV L C   G P+P   W ++G  I+  SD       G  +I    E  D G Y C  +
Sbjct: 117 KKVALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLAT 176

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N VG   S    L       F+      ++  E + V   C      PE    WV N  P
Sbjct: 177 NTVGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 236

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
            S    + RR +      + I  ++ SD G+Y C   N++                  V 
Sbjct: 237 -SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVM 295

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            +    +  H P    A K      G TV + C   G P P + W+     +        
Sbjct: 296 GEYEPKIEVHFPFTVTAAK------GTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK 349

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               L+I +V   D+G Y C A N  G     G L V  + H  ++  D ++++G    +
Sbjct: 350 SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRW 409

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  + +  WL+   P+  +S    V      L +   ++ D+G Y C A+ + 
Sbjct: 410 ECKATGKP--RPTYRWLKNGVPLSPQSRVEMVNG---VLMIHNVNQSDAGMYQCLAENKY 464

Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
             I A A L +   L +   F L Q+   KK ++
Sbjct: 465 GAIYASAELKI---LASAPTFALNQL---KKTII 492



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 125/297 (42%), Gaps = 35/297 (11%)

Query: 113 AKSYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
           + ++  D SV   P F  EP+   F   ++E+ V   C+  G P P   W+ NG  I   
Sbjct: 86  SDAFKQDESVDYGPVFVQEPDDIIFPTDSDEKKVALNCEVRGNPVPSYRWLRNGTEI-DL 144

Query: 170 PPNPRRKVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
             + R  +      I N  ++ D+G+Y C ATN++G +         A+    +   +  
Sbjct: 145 ESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNTVGSILSREATLQFAYLGNFSGRTRSA 204

Query: 229 YTV-DGKTVVLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVA 278
            +V +G+ VVL C    +P P       +W+ N+          R+   ETG+L I+ V 
Sbjct: 205 VSVREGQGVVLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQ 260

Query: 279 FADSGEYTCFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATF 327
            +D G Y C  +N +  A+       LT++    + +     EV          G +   
Sbjct: 261 TSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKM 320

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
            C A+ +P    +I W++ +  I  ++  R  Q+    L +      D+G Y CRA+
Sbjct: 321 ECFALGNPV--PTITWMKVNGYIPSKARLRKSQA---VLEIPNVQLDDAGIYECRAE 372



 Score = 46.2 bits (108), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  ++++V + C   G+P P   W K    +  + RI+    G SL I +   SD+
Sbjct: 488 KKTIIVTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDG-SLRILNASKSDE 546

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEI 157
           G Y C   N  G A+  +  LSV       + P+       E++   CKA      +   
Sbjct: 547 GKYVCRGENVFGSAEIIA-SLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 605

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          + R +     + I N+     G YGC
Sbjct: 606 YWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGC 650


>gi|405960111|gb|EKC26058.1| Neuroglian [Crassostrea gigas]
          Length = 1279

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 193/748 (25%), Positives = 300/748 (40%), Gaps = 101/748 (13%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K ++ + KK V +  + V+  CIF G P P   W + G       R S+ + G  L+I  
Sbjct: 256 KIRWTSEKKVVGVEGESVKFMCIFSGYPTPTISWRRVG-------RASEESSGYELVISA 308

Query: 94  VEFSDQGSYTCEVSNGV-GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGL 152
           V+ SD+G Y C  +N V G  +     + V A P +   P     +  E+ T  C A G 
Sbjct: 309 VKPSDKGEYVCSGTNSVTGNPQEVKFMVDVQAKPTWVSPPLDTRVSVGESGTVNCTAVGN 368

Query: 153 PEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYV 212
           P P + W  +GKP    P   +R +  N I I+NL K ++    CNATNS G ++ DVY+
Sbjct: 369 PTPTVEWYIDGKPFKAIPG--KRYIQNNVIHIDNLNKKESTVVQCNATNSHGSLFSDVYI 426

Query: 213 NVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDL 272
           NVLA  PEIT   K      G++ VL+C   G P P + W+   + L G RY   +T  +
Sbjct: 427 NVLALPPEITNWTKSLKVAAGRSAVLSCEHNGYPTPTLEWMRGPQLLNGDRYNFTQTS-I 485

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT------ 326
            I +V+  D G + C ++N  G  Q    L V++ T I D     E E G+++       
Sbjct: 486 TILNVSKNDEGVFICISKNNQGREQKENMLIVRDKTSIKDLTGITETEEGKTSIEVDSDE 545

Query: 327 ---FRCNAVSDPSLKLSIVWLRGSEPI-DFESEPRFVQSNDYSLTVTKSSELDSGQYTCR 382
              F C A++DP   +  VW +  + I DF       +     L V ++    SG YTC 
Sbjct: 546 DVKFTCIAMTDPREMVRYVWKKNGKVIKDFGDPHVRCEEGCSVLRVQEADATQSGNYTCV 605

Query: 383 AQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV------SWNPVSPQSLRGHFR 436
           A   +D  +    L V+   + P +  L    D K  +       ++ P+   ++  +  
Sbjct: 606 ANNGIDEDQRTIELRVKAAPDRPDDVKLTSCGDWKLGLQWSAGFHNYMPIINYTIE-YST 664

Query: 437 GYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFA-RVLAFNGAYNGPPSEII 495
            +    WT           +    +S T   D  + A   +  R+ A N      PSE  
Sbjct: 665 SFDWDKWT----------TLYQTSDSNTKVSDVSLSAGVIYKFRIKALNQKGYSEPSEPT 714

Query: 496 SFVT-----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTK 548
           +        P   P  V+  +    G    Y++W  + P + NG    YK+  +++    
Sbjct: 715 NTCKTDPKRPARHPTGVKVKDYKKDG--FLYVEWEAISPMEHNGEDFKYKLSVRNIADDN 772

Query: 549 VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG--DGAESKYLFY----VPF 602
                    YI     TS ++   +   KY + +A     G   G   +   +    VP 
Sbjct: 773 TK------SYIVAGDKTSKEIETKDTYQKYGVRVAAENSVGAARGIPQEVFGFSGMGVPT 826

Query: 603 KNPDNVEGRGSTP---NNLVISWTAMPEIEHNAPHFKYRI------FWRRHNTGEAWNQD 653
             P N E    +P         W ++P+   ++P  K +       +WRR N G      
Sbjct: 827 IKPQNFELDKKSPFTAETATFVWDSIPD---DSPDLKGKFDGYVIRYWRRDNPGTI---- 879

Query: 654 DVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 713
                ++ E+         P  +    T T ++  G IRE I N    +  ++D      
Sbjct: 880 -----KRIEI---------PPRVLPAATGTGEEDSGKIRETINNLPAYSQLKLD------ 919

Query: 714 KNFARVLAFNGAYNGPPSEIISFVTPEG 741
                VL  N  Y   PS  I   TPEG
Sbjct: 920 -----VLVKNVMYESEPSNPIDLNTPEG 942



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 118/279 (42%), Gaps = 30/279 (10%)

Query: 400  VPLEAPSNFTLIQV--IDAKKAVVSWNPVSPQS--LRGHFRGYKVQTWTEKDGEGSIREL 455
            VP   P NF L +     A+ A   W+ +   S  L+G F GY ++ W  +D  G+I+ +
Sbjct: 824  VPTIKPQNFELDKKSPFTAETATFVWDSIPDDSPDLKGKFDGYVIRYW-RRDNPGTIKRI 882

Query: 456  IV---------NKGESTTTEVDKFV---PASKNFA-RVLAFNGAYNGPPSEIISFVTPEG 502
             +           GE  + ++ + +   PA       VL  N  Y   PS  I   TPEG
Sbjct: 883  EIPPRVLPAATGTGEEDSGKIRETINNLPAYSQLKLDVLVKNVMYESEPSNPIDLNTPEG 942

Query: 503  VPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERL---PYI 559
            VP  VQ L+A   G +   + W  P++ NG L  + + YQ V G ++   +E      Y 
Sbjct: 943  VPSEVQKLKAEKRGENFIDIGWYLPKRINGDLQQFVVTYQEVFGGRLSQEIEDTIDANYS 1002

Query: 560  SDPT-TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY----VPFKNPDNVEGRGST 614
              PT     ++ GLEP+T YR+ +   T+ G G ++          P K P         
Sbjct: 1003 ISPTDMIEHRIVGLEPNTMYRVVVYATTRIGPGDQAALDVMTADKAPLKPPIVTVLSLPE 1062

Query: 615  PNNLVISWTA---MPEIEHNAPHFKYRIFWRRHNTGEAW 650
             N   ISW +     E+    P  ++++   R N+   W
Sbjct: 1063 KNGFNISWISDSPSNEVNLKRPGEQFKVV-ERMNSSRNW 1100



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 117/285 (41%), Gaps = 52/285 (18%)

Query: 134 FINAAEEETVTFECKASG-LPEPEIHWVHNGKPIS------QAPPNPRR---KVGPNRIT 183
           ++  A+E+    +C ASG  P+    W+ +GK I       + P N  R   + G   + 
Sbjct: 50  YVYIAKEKNTRLQCVASGNTPQLRYDWLKDGKLIDFTSNEVKYPNNTLRIYKEQGLGTLN 109

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP----KDEYTVDGKTV--- 236
           I  +++SD G Y C A++      +D     L+   E+ EA     +D   VD K V   
Sbjct: 110 IHRVQESDYGTYQCRASSD----REDSQAVSLSKKVELIEAIISPFQDSSDVDSKKVPQG 165

Query: 237 ---VLTCR-VFGAPKPEVNWIHNQ--KELTGGRYTILE-TGDLKITDVAFADSGE--YTC 287
              +LTC   F  PK  ++W  +   +E+      +++  G+L   +VA  D G+  Y+C
Sbjct: 166 QYLMLTCDPPFSNPKATLSWTLDDTLREMDFNERIVMDYEGNLHFANVASEDGGDKMYSC 225

Query: 288 FA-----------RNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
           FA           R       G  +         T + +   VE G+S  F C     P+
Sbjct: 226 FAALHFIGFYTKGRTTELKVYGDKAAFQPAKIRWTSEKKVVGVE-GESVKFMCIFSGYPT 284

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTC 381
             +S  W R    +   SE    +S+ Y L ++     D G+Y C
Sbjct: 285 PTIS--WRR----VGRASE----ESSGYELVISAVKPSDKGEYVC 319


>gi|35010|emb|CAA42508.1| Neural cell adhesion molecule L1 [Homo sapiens]
          Length = 1257

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 196/721 (27%), Positives = 304/721 (42%), Gaps = 80/721 (11%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P     +   P+ P+DR++  N+ K+L +  V   D G Y 
Sbjct: 253 VALQGQPLVLECIAEGFPTPTIKSVRPSGPM-PADRVTYQNHNKTLQLLKVGEEDDGEYR 311

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 312 CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVEGRPQPEVTWRING 370

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 371 IPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 430

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 431 ADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 490

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 491 DTGRYFCLAANDQNNVTIMANLKVKDATQITQGPRSTIEKKGSRVTFTCQASFDPSLQPS 550

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 551 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 608

Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
                 VP    S+  L+      +  VSW+P    +       Y ++   ++       
Sbjct: 609 VGSPGPVPRLVLSDLHLVT---QSQVRVSWSPAEDHN--APIEKYDIEFEDKEMAPEKWY 663

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTV----- 507
            L    G  T+T + K  P      RV A N    G PS +  + VTPE  P        
Sbjct: 664 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVK 722

Query: 508 -QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
            +  E   +  +   L+W+    P    + Y+++++  +GT+ GP  E++  +SDP    
Sbjct: 723 GEGNETTNMVITWKPLRWMDWNAPQ---VQYRVQWRP-QGTR-GPWQEQI--VSDPFLVV 775

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
           +  +   P   Y I +      G G E +    + +   D  +              A+P
Sbjct: 776 SNTSTFVP---YEIKVQAVNSQGKGPEPQ--VTIGYSGEDYPQ--------------AIP 816

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVL-DWRQSELVLANQPTFQPYEIKVVQTWTE- 684
           E+E                  E  N   VL  WR  +L    +   + Y    V  W E 
Sbjct: 817 ELE----------------GIEILNSSAVLVKWRPVDLAQV-KGHLRGYN---VTYWREG 856

Query: 685 ---KDGEGSI-RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 740
              K  +  I ++ +V    +T+  +    P S     V AFNG  +GP SE  +F TPE
Sbjct: 857 SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGSGPASE-FTFSTPE 915

Query: 741 G 741
           G
Sbjct: 916 G 916



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 175/696 (25%), Positives = 264/696 (37%), Gaps = 94/696 (13%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI +G    +LI+ +V+ SD     CE  
Sbjct: 352  LDCQVEGRPQPEVTWRINGIPVEELAKDQKYRIQRG----ALILSNVQPSDTMVTQCEAR 407

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + +   A +  T    CKA G P P + W+  +G 
Sbjct: 408  NRHGLLLANAY-IYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGT 466

Query: 165  PISQAP---PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q     P     +G     I +L+ +DTG Y C A N    V   +  N+ +  A +
Sbjct: 467  TVLQDERFFPYANGTLG-----IRDLQANDTGRYFCLAANDQNNV--TIMANLKVKDATQ 519

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWI---HNQKELTGGRYTILETGDLKIT 275
            IT+ P+      G  V  TC+    P  +P + W     + +EL       +E G L I 
Sbjct: 520  ITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDGRDLQELGDSDKYFIEDGRLVIH 579

Query: 276  DVAFADSGEYTCFARNKLGTAQGSGSLT-----------VKEHTHITDQPEDYEVEAGQS 324
             + ++D G Y+C A  +L   +    L            V    H+  Q +   V    S
Sbjct: 580  SLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLVTQSQ---VRVSWS 636

Query: 325  ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF------VQSNDYSLTVTKSSELDSGQ 378
                 NA   P  K  I      E  D E  P        V  N  S T+  S  +    
Sbjct: 637  PAEDHNA---PIEKYDI------EFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYV---H 684

Query: 379  YTCRAQTELDFIEAQ---ATLTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSP 428
            YT R      +   +    + TV  P  AP        +D K         V++W P+  
Sbjct: 685  YTFRVTAINKYGPGEPSPVSETVVTPEAAPEK----NPVDVKGEGNETTNMVITWKPLRW 740

Query: 429  QSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
                     Y+VQ W  +   G  +E IV+      +    FVP      +V A N    
Sbjct: 741  MDWNAPQVQYRVQ-WRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYE---IKVQAVNSQGK 796

Query: 489  GPPSEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QS 543
            GP  ++    + E  P  +  LE I  L SSA  +KW  V   Q  G L GY + Y  + 
Sbjct: 797  GPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGYNVTYWREG 856

Query: 544  VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFK 603
             +       + +   +    TTS  L+GL P + Y + +  +   G G  S++ F  P  
Sbjct: 857  SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGSGPASEFTFSTPEG 916

Query: 604  NPDNVEG---RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ 660
             P + E       +  +L++ W   P + HN     Y + +  H   E        + R 
Sbjct: 917  VPGHPEALHLECQSNTSLLLRW--QPPLSHNGVLTGYVLSY--HPLDEGGKGQLSFNLRD 972

Query: 661  SELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
             EL   N     P   Y  ++  T  E  GE  +RE
Sbjct: 973  PELRTHNLTDLSPHLRYRFQLQATTKEGPGEAIVRE 1008



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 93/389 (23%), Positives = 159/389 (40%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS----QGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P + +     Q  +  S  I   + 
Sbjct: 43  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSFTITGNNS 102

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P      E E+V   C  
Sbjct: 103 NFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPV--EVEEGESVVLPCNP 160

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A       
Sbjct: 161 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGIRT 218

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P +  + 
Sbjct: 219 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSTHLVALQGQPLVLECIAEGFPTPTIKSVR 278

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++  V   D GEY C A N LG+A+ +  +TV+   +   +
Sbjct: 279 PSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHK 338

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++  ++ +  +    +L ++    
Sbjct: 339 PQSHLYGPGETARLDCQVEGRP--QPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQP 396

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A+     + A A +  VQ+P
Sbjct: 397 SDTMVTQCEARNRHGLLLANAYIYVVQLP 425



 Score = 41.6 bits (96), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 73/308 (23%), Positives = 121/308 (39%), Gaps = 36/308 (11%)

Query: 122 VLAAPYFTVE-PEFINAAEEETVTFECKASGLPEPEIHWVHNG---KP-------ISQAP 170
           V+  P  T + P  +     + ++ +C+ASG PE +  W  +G   KP       + Q+P
Sbjct: 31  VMEPPVITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSP 90

Query: 171 PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEAPKDEY 229
            +    +  N     N  +   G Y C A+N LG         +   AP+   E  K   
Sbjct: 91  HSGSFTITGNN---SNFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVE 147

Query: 230 TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL---TGGRYTILETGDLKITDVAFADS-GEY 285
             +G++VVL C    + +P   +  N K L      R T+ + G+L   +V  +D+  +Y
Sbjct: 148 VEEGESVVLPCNPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDY 207

Query: 286 TCFARN---KLGTAQGSGSLTVKEHTHITDQ------PEDYEVE----AGQSATFRCNAV 332
            C A     +    +    L VK    + D+      P +         GQ     C A 
Sbjct: 208 ICHAHFPGIRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSTHLVALQGQPLVLECIAE 267

Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
             P+  +  V   G  P D  +     Q+++ +L + K  E D G+Y C A+  L     
Sbjct: 268 GFPTPTIKSVRPSGPMPADRVT----YQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARH 323

Query: 393 QATLTVQV 400
              +TV+ 
Sbjct: 324 AYYVTVEA 331


>gi|34922043|sp|Q98902.1|L1CAM_TAKRU RecName: Full=Neural cell adhesion molecule L1; Short=N-CAM-L1;
           Short=NCAM-L1; AltName: Full=L1-CAM; Flags: Precursor
 gi|1495413|emb|CAA96469.1| neural cell adhesion molecule L1 [Takifugu rubripes]
 gi|3098264|gb|AAC15580.1| neural cell adhesion molecule L1 homolog [Takifugu rubripes]
          Length = 1277

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 188/716 (26%), Positives = 299/716 (41%), Gaps = 73/716 (10%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           ALR + +EL CI  G P P+  W +    ++ S RIS+  + + L   ++  SD G Y C
Sbjct: 270 ALRGQTLELECIVQGLPTPKVSWLRKDGEMSES-RISKDMFDRRLQFTNISESDGGEYQC 328

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N  G    ++  ++V A+PY+T  P     A  ETV  +C+A G+P P I W  NG 
Sbjct: 329 TAENVQGRT-FHTYTVTVEASPYWTNAPVSQLYAPGETVKLDCQADGIPSPTITWTVNGV 387

Query: 165 PISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           P+S     PRR +  +  + ++++   DT  Y C A+N  G +  +  V V+   P+I  
Sbjct: 388 PLSATSLEPRRSLTESGSLILKDVIFGDTAIYQCQASNKHGTILANTNVYVIELPPQILT 447

Query: 224 APKDEYT-VDGKTVVLTCRVFGAPKPEVNWIHNQKEL--TGGRYTILETGDLKITDVAFA 280
              + YT V+G+  +L C  FG+PKP+V W  +   L     R  +L  G L+I +V+  
Sbjct: 448 ENGNTYTFVEGQKALLECETFGSPKPKVTWESSSISLLLADPRVNLLTNGGLEIANVSHD 507

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D G YTC  +        +  + V   T I   P+   ++ G++A F C  V+DP L   
Sbjct: 508 DEGIYTCLVQG--SNISVNAEVEVLNRTVILSPPQALRLQPGKTAIFTCLYVTDPKLSSP 565

Query: 341 IVWLRGSEPIDFESEPRFVQSNDY-SLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           ++  R ++   FES      + D   L ++     D G YTC+  T+LD +EA +TLT+ 
Sbjct: 566 LLQWRKNDQKIFESHSDKKYTFDGPGLIISNVEPGDEGVYTCQIITKLDMVEASSTLTL- 624

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P     +QV +AK  VV+ N             Y V+   +   E    EL    
Sbjct: 625 --CDRPDPPVHLQVTNAKHRVVTLNWTPGDDNNSPILEYVVEFEDQDMKENGWEELKRVA 682

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-----TPEGVPGTVQSLEAIP 514
            +     +  +   S  F RV+A N      PS++          P+  P  V+S    P
Sbjct: 683 ADKKHVNLPLWPYMSYRF-RVIAINDQGKSDPSKLSDLYKTPADAPDSNPEDVRSESTDP 741

Query: 515 LGSSAFYLKWVKPEQPN--GVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGL 572
                  + W + ++ N  G    Y + ++ V G+  GP       I+ P      +  +
Sbjct: 742 ---DTLVITWEEMDKRNFNGPDFKYLVMWRRVVGS--GPDWHEEYTIAPPFI----VTDV 792

Query: 573 EPSTKYRIHLAGYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPE 627
           +  + + I +    K G G E   +       VP + P N+         + ++W+A+ +
Sbjct: 793 QNFSAFEIKVQAVNKKGLGPEPDPIIGYSGEDVPLEAPLNLGVLLENSTTIRVTWSAVDK 852

Query: 628 IEHNAPHFKYRIF--WRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEK 685
                    Y+I+  W  H    A                      +P  I +VQT    
Sbjct: 853 ETVRGHLLGYKIYLTWGHHRNSRAQ---------------------EPENIVMVQT---- 887

Query: 686 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
            G    ++ I N             P       + AFN    GP SE  SF+TPEG
Sbjct: 888 -GANEEKKSITN-----------LRPYCHYDLAISAFNSKGEGPLSEKTSFMTPEG 931



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 129/282 (45%), Gaps = 25/282 (8%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TW-TEKDGEGSIRELIV 457
            VPLEAP N  ++ + ++    V+W+ V  +++RGH  GYK+  TW   ++      E IV
Sbjct: 825  VPLEAPLNLGVL-LENSTTIRVTWSAVDKETVRGHLLGYKIYLTWGHHRNSRAQEPENIV 883

Query: 458  NKGESTTTE---VDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                    E   +    P       + AFN    GP SE  SF+TPEGVPG   S++   
Sbjct: 884  MVQTGANEEKKSITNLRPYCHYDLAISAFNSKGEGPLSEKTSFMTPEGVPGPPMSMQMTS 943

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
               S   L W  P +PNG+L+GY ++Y+ ++     PL  ++  I+ P  T   L GL+ 
Sbjct: 944  PSESEITLHWTPPSKPNGILLGYSLQYRKMQSDD-NPL--QVVDIASPEITHLTLKGLDR 1000

Query: 575  STKYRIHLAGYTKAGDGAESKYLFYVPFKN--PDNVEGRGSTPNNLVISWTAMPEIEHNA 632
             + Y+  L   T AG G   + L     +   P N+    +   ++ +SW A     H  
Sbjct: 1001 HSHYQFLLMARTAAGKGLSIEILGATTLEGLPPANI-SLSAEERSVNLSWEA--RKRHRT 1057

Query: 633  PHFKYRIFWRR--HNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
              F+   F +    N G+         W+++E+V ++   FQ
Sbjct: 1058 VGFQIHYFSKNGTKNGGK---------WKKTEMVNSSLQFFQ 1090



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 165/394 (41%), Gaps = 40/394 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSD----RISQGNYGKSLIIKHVEFSD-----QGSYT 103
           + C   G P P   W+KDG   +PS     ++++   G S+        D     QG Y 
Sbjct: 70  MRCEASGNPSPTFHWTKDGEEFDPSSDPEMKVTE-EAGSSVFYTLSNTMDTLKQYQGKYI 128

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEE-ETVTFECK-ASGLPEPEIHWVH 161
           C  SN +G A S +  L + A P    E +    AE   ++   C       +P IHW+ 
Sbjct: 129 CYASNELGTAVSNAAVLMIDAPPVQQKEKKVTEKAEAGHSIALSCNPPQSSMQPIIHWMD 188

Query: 162 NGKPISQAPPNPRRKVGPN-RITIENLRKSDTGN-YGCN----ATNSLGYVYKDVYVNV- 214
           N   +     + R  VG +  +   NL   D+ N Y CN    AT ++    + + + V 
Sbjct: 189 NR--LRHIRLSDRVMVGKDGNLYFANLLTEDSRNDYTCNIQYLATRTI-LAKEPITLTVN 245

Query: 215 ------LAHAPEI---TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
                     P++   T +    + + G+T+ L C V G P P+V+W+    E++  R +
Sbjct: 246 PSNLVPRNRRPQMMRPTGSHSTYHALRGQTLELECIVQGLPTPKVSWLRKDGEMSESRIS 305

Query: 266 I-LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
             +    L+ T+++ +D GEY C A N  G    + ++TV+   + T+ P       G++
Sbjct: 306 KDMFDRRLQFTNISESDGGEYQCTAENVQGRTFHTYTVTVEASPYWTNAPVSQLYAPGET 365

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFES-EPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
               C A   PS   +I W     P+   S EPR   +   SL +      D+  Y C+A
Sbjct: 366 VKLDCQADGIPS--PTITWTVNGVPLSATSLEPRRSLTESGSLILKDVIFGDTAIYQCQA 423

Query: 384 QTELDFIEAQATLTV-----QVPLEAPSNFTLIQ 412
             +   I A   + V     Q+  E  + +T ++
Sbjct: 424 SNKHGTILANTNVYVIELPPQILTENGNTYTFVE 457



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 122/299 (40%), Gaps = 40/299 (13%)

Query: 116 YSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           Y  DL +   P  T +PE +     E +   C+ASG P P  HW  +G+    +  +P  
Sbjct: 43  YISDLKI--PPAITTQPESVTVFSVEDLVMRCEASGNPSPTFHWTKDGEEFDPS-SDPEM 99

Query: 176 KVGPN---------RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
           KV              T++ L++   G Y C A+N LG    +  V ++  AP + +  K
Sbjct: 100 KVTEEAGSSVFYTLSNTMDTLKQYQ-GKYICYASNELGTAVSNAAV-LMIDAPPVQQKEK 157

Query: 227 D--EYTVDGKTVVLTCR-VFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFAD 281
              E    G ++ L+C     + +P ++W+ N+        R  + + G+L   ++   D
Sbjct: 158 KVTEKAEAGHSIALSCNPPQSSMQPIIHWMDNRLRHIRLSDRVMVGKDGNLYFANLLTED 217

Query: 282 S-GEYTC---FARNKLGTAQGSGSLTVKEHTHI-----------TDQPEDYEVEAGQSAT 326
           S  +YTC   +   +   A+   +LTV     +           T     Y    GQ+  
Sbjct: 218 SRNDYTCNIQYLATRTILAKEPITLTVNPSNLVPRNRRPQMMRPTGSHSTYHALRGQTLE 277

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN-DYSLTVTKSSELDSGQYTCRAQ 384
             C     P+ K+S  WLR    +   SE R  +   D  L  T  SE D G+Y C A+
Sbjct: 278 LECIVQGLPTPKVS--WLRKDGEM---SESRISKDMFDRRLQFTNISESDGGEYQCTAE 331


>gi|219520630|gb|AAI44186.1| CNTN5 protein [Homo sapiens]
          Length = 1100

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 163/611 (26%), Positives = 263/611 (43%), Gaps = 49/611 (8%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           A +   V++ C   G P+P   W K    +P     R SQ      L I +V+  D G Y
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQA----VLEIPNVQLDDAGIY 367

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C   N  G+  S+   L V   P++  +           + +ECKA+G P P   W+ N
Sbjct: 368 ECRAENSRGK-NSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKN 426

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--E 220
           G P+S   P  R ++    + I N+ +SD G Y C A N  G +Y    + +LA AP   
Sbjct: 427 GVPLS---PQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFA 483

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
           + +  K       + VV+ C+  G+PKP ++W    + +    R  +L  G L+I + + 
Sbjct: 484 LNQLKKTIIVTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAVLPDGSLRILNASK 543

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           +D G+Y C   N  G+A+   SL+VKE T I   P+  E+  G+S    C A+ D SL +
Sbjct: 544 SDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 603

Query: 340 SIVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +  W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A
Sbjct: 604 TFYWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEA 663

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKD 447
            L V+ P   P    +++ I    A +SW+P +          Y +Q        W    
Sbjct: 664 ELLVRGP-PGPPGIVIVEEITESTATLSWSPAADN--HSPISSYNLQARSPFSLGWQTVK 720

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGT 506
              ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T
Sbjct: 721 ---TVPEIITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKT 775

Query: 507 VQSLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISD 561
             +  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+
Sbjct: 776 APTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSE 830

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPN 616
            +    +   + P T + + +  Y   GDG  S+ +        P   P +V+    + +
Sbjct: 831 ASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVS 890

Query: 617 NLVISWTAMPE 627
            ++++W  + E
Sbjct: 891 EILVAWKHIKE 901



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 160/650 (24%), Positives = 241/650 (37%), Gaps = 76/650 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + A
Sbjct: 253 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 312

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I N++  D G Y 
Sbjct: 313 AKGTTVKMECFALGNPVPTITWMKVNG----YIPSKARLRKSQAVLEIPNVQLDDAGIYE 368

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V  + P   E   D     G  +   C+  G P+P   W+ N 
Sbjct: 369 CRAENSRGKNSFRGQLQVYTY-PHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG 427

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITDQ 313
             L+      +  G L I +V  +D+G Y C A NK G    S  L +        +   
Sbjct: 428 VPLSPQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQL 487

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +   V   Q     C     P  K +I W +G   +      R     D SL +  +S+
Sbjct: 488 KKTIIVTKDQEVVIECKPQGSP--KPTISWKKGDRAV--RENKRIAVLPDGSLRILNASK 543

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI----------QVIDAKKAV 420
            D G+Y CR +      E  A+L+V+ P      P    L            + DA   V
Sbjct: 544 SDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 603

Query: 421 VSW-----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
             +      P+  +   GHF   + Q       +  IR +++         V     +  
Sbjct: 604 TFYWTLKGQPIDFEEEGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQTTADSVS 660

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
           + A +L       GPP          G PG V   E   +  S   L W      +  + 
Sbjct: 661 DEAELLV-----RGPP----------GPPGIVIVEE---ITESTATLSWSPAADNHSPIS 702

Query: 536 GYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y ++ +S     +G   ++ +P I      SA    L P  +Y   +      G G  S
Sbjct: 703 SYNLQARS--PFSLGWQTVKTVPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPS 760

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P NV GR    + LVI+W  + E   N   F Y + +R + T  
Sbjct: 761 TPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT-R 819

Query: 649 AWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
            W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V
Sbjct: 820 GWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVV 867



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 149/394 (37%), Gaps = 39/394 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           KKV L C   G P+P   W ++G  I+  SD       G  +I    E  D G Y C  +
Sbjct: 117 KKVALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLAT 176

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N VG   S    L       F+      ++  E + V   C      PE    WV N  P
Sbjct: 177 NTVGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 236

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
            S    + RR +      + I  ++ SD G+Y C   N++                  V 
Sbjct: 237 -SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVM 295

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            +    +  H P    A K      G TV + C   G P P + W+     +        
Sbjct: 296 GEYEPKIEVHFPFTVTAAK------GTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK 349

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               L+I +V   D+G Y C A N  G     G L V  + H  ++  D ++++G    +
Sbjct: 350 SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRW 409

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  + +  WL+   P+  +S    V      L +   ++ D+G Y C A+ + 
Sbjct: 410 ECKATGKP--RPTYRWLKNGVPLSPQSRVEMVNG---VLMIHNVNQSDAGMYQCLAENKY 464

Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
             I A A L +   L +   F L Q+   KK ++
Sbjct: 465 GAIYASAELKI---LASAPTFALNQL---KKTII 492



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 125/297 (42%), Gaps = 35/297 (11%)

Query: 113 AKSYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
           + ++  D SV   P F  EP+   F   ++E+ V   C+  G P P   W+ NG  I   
Sbjct: 86  SDAFKQDESVDYGPVFVQEPDDIIFPTDSDEKKVALNCEVRGNPVPSYRWLRNGTEI-DL 144

Query: 170 PPNPRRKVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
             + R  +      I N  ++ D+G+Y C ATN++G +         A+    +   +  
Sbjct: 145 ESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNTVGSILSREATLQFAYLGNFSGRTRSA 204

Query: 229 YTV-DGKTVVLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVA 278
            +V +G+ VVL C    +P P       +W+ N+          R+   ETG+L I+ V 
Sbjct: 205 VSVREGQGVVLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQ 260

Query: 279 FADSGEYTCFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATF 327
            +D G Y C  +N +  A+       LT++    + +     EV          G +   
Sbjct: 261 TSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKM 320

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
            C A+ +P    +I W++ +  I  ++  R  Q+    L +      D+G Y CRA+
Sbjct: 321 ECFALGNPV--PTITWMKVNGYIPSKARLRKSQA---VLEIPNVQLDDAGIYECRAE 372



 Score = 46.6 bits (109), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  ++++V + C   G+P P   W K    +  + RI+    G SL I +   SD+
Sbjct: 488 KKTIIVTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAVLPDG-SLRILNASKSDE 546

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEI 157
           G Y C   N  G A+  +  LSV       + P+       E++   CKA      +   
Sbjct: 547 GKYVCRGENVFGSAEIIA-SLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 605

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          + R +     + I N+     G YGC
Sbjct: 606 YWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGC 650


>gi|329663127|ref|NP_001192470.1| neural cell adhesion molecule L1-like protein precursor [Bos
           taurus]
          Length = 1225

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 188/714 (26%), Positives = 310/714 (43%), Gaps = 70/714 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+   + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V   D+G+Y C 
Sbjct: 269 LKGDTLLLECFAEGLPTPQVDWNKMGGDL-PKGRETKENYGKTLKIENVSSQDKGTYRCT 327

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   ++V   P++T +P+    +   +    C+A G PEP I W  NG P
Sbjct: 328 ASNVLGSA-THDFQVTVEEPPHWTKKPQSGVYSTGSSGILLCEAEGEPEPTIKWRVNGLP 386

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           I + P +    + P  I+  N++ + T  Y C ATN  G +  +  ++VL   P I  A 
Sbjct: 387 IERNPYS-GDVMSPGEISFTNVQPNHTAVYQCEATNVHGTILANANIDVLDVRPLIQTAD 445

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
           ++ Y TV G +  L C  F +P+  V+W  +   K L G RY + E G L+IT+    D+
Sbjct: 446 EENYATVVGYSAFLHCEFFASPEAIVSWQKVEEAKPLDGRRYHVHENGTLQITETTEEDA 505

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N  G    + +L ++  T +   P++  V    +    C +  D  LK  L 
Sbjct: 506 GSYSCWVENAKGKTAVTANLDIRNATSLRVSPKNPRVPKSHTLELHCESQCDSHLKYSLK 565

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y+C A T LD +     +TV 
Sbjct: 566 LSWSKDGEAFEMNGTEDGRIIIDGANLTISNVTMEDEGIYSCSAHTALDSVADMTQVTVL 625

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +      +   Y V+    K+  G   EL   +
Sbjct: 626 DVPDPPENLHLSERQN-RSVRLTWE--AGDDHNSNISEYIVEFEGNKEEPGRWEELTRVQ 682

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  V    P  +   RV+A N      PS       TP   P    Q++       
Sbjct: 683 GKETTV-VLSLAPYVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQP 741

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 742 KEMIIKWEPLKAMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 792

Query: 576 T--KYRIHLAGYTKAGDGAESK-YLFYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +      G G E +  + Y     PD    ++G     + LV ++W+ +P+ 
Sbjct: 793 VYAPYDVQVQAINHLGSGPEPQSVILYSGEDYPDAAPVIQGVDVINSTLVKVTWSTIPK- 851

Query: 629 EHNAPHFK-YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDG 687
           E    H K Y++ W        W    +LD R             P E+ +++   ++D 
Sbjct: 852 ERVHGHLKGYQVNW--------WKTKSLLDGRT-----------HPKEVNILRFSGQRD- 891

Query: 688 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
            G +  L            D F   S+    VLA+N    GP SE   F TPEG
Sbjct: 892 YGMVPSL------------DAF---SEFHLTVLAYNSKGAGPESEPFIFQTPEG 930



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 143/655 (21%), Positives = 255/655 (38%), Gaps = 85/655 (12%)

Query: 54  FCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113
           +C F   P  +TI  K  + +  +             +KHV  S   +     +N + + 
Sbjct: 202 YCCFAAFPRLRTIVQKMPMKLTVNS------------LKHVNDSSSSTEIISKANSIKQR 249

Query: 114 KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           K       +L  P  +    F+   + +T+  EC A GLP P++ W   G  + +     
Sbjct: 250 KP-----RLLLPPPESGSESFVTILKGDTLLLECFAEGLPTPQVDWNKMGGDLPKG---- 300

Query: 174 RRKVGPN---RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
            R+   N    + IEN+   D G Y C A+N LG    D  V V    P  T+ P+    
Sbjct: 301 -RETKENYGKTLKIENVSSQDKGTYRCTASNVLGSATHDFQVTV-EEPPHWTKKPQSGVY 358

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCF 288
             G + +L C   G P+P + W  N   +    Y+  ++  G++  T+V    +  Y C 
Sbjct: 359 STGSSGILLCEAEGEPEPTIKWRVNGLPIERNPYSGDVMSPGEISFTNVQPNHTAVYQCE 418

Query: 289 ARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           A N  GT   + ++ V +   +  T   E+Y    G SA   C   + P   +S   +  
Sbjct: 419 ATNVHGTILANANIDVLDVRPLIQTADEENYATVVGYSAFLHCEFFASPEAIVSWQKVEE 478

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPS 406
           ++P+D     R+    + +L +T+++E D+G Y+C  +         A L ++       
Sbjct: 479 AKPLDGR---RYHVHENGTLQITETTEEDAGSYSCWVENAKGKTAVTANLDIR------- 528

Query: 407 NFTLIQVIDAKKAVVSWNPVSPQS----------LRGHFRGYKVQTWTEKDGEG------ 450
           N T ++V          NP  P+S             H +     +W+ KDGE       
Sbjct: 529 NATSLRVSPK-------NPRVPKSHTLELHCESQCDSHLKYSLKLSWS-KDGEAFEMNGT 580

Query: 451 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSL 510
               +I++    T + V        + +   A +   +      ++ VT   VP   ++L
Sbjct: 581 EDGRIIIDGANLTISNVTMEDEGIYSCSAHTALDSVAD------MTQVTVLDVPDPPENL 634

Query: 511 EAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP-LLERLPYISDPTTTSAKL 569
                 + +  L W   +  N  +  Y ++++   G K  P   E L  +    TT   +
Sbjct: 635 HLSERQNRSVRLTWEAGDDHNSNISEYIVEFE---GNKEEPGRWEELTRVQGKETTV--V 689

Query: 570 AGLEPSTKYRIHLAGYTKAGDGAESKYLFY------VPFKNPDNVEGRGSTPNNLVISWT 623
             L P  +Y+  +    + G    S    +       P KNP N+  + S P  ++I W 
Sbjct: 690 LSLAPYVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWE 749

Query: 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            +  +E N P  +YR+ W+       W ++ V +     L +     + PY+++V
Sbjct: 750 PLKAMEQNGPGLEYRVTWKPQGAPVEWEEETVTN---HTLRVMTPAVYAPYDVQV 801



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 137/575 (23%), Positives = 236/575 (41%), Gaps = 51/575 (8%)

Query: 53   LFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L C F  +P     W K  +  P++   R    +   +L I      D GSY+C V N  
Sbjct: 459  LHCEFFASPEAIVSWQKVEEAKPLD--GRRYHVHENGTLQITETTEEDAGSYSCWVENAK 516

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA---SGLP-EPEIHWVHNGKPI 166
            G+  + + +L +  A    V P+     +  T+   C++   S L    ++ W  +G+  
Sbjct: 517  GKT-AVTANLDIRNATSLRVSPKNPRVPKSHTLELHCESQCDSHLKYSLKLSWSKDGEAF 575

Query: 167  SQ-APPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
                  + R  +    +TI N+   D G Y C+A  +L  V     V VL    ++ + P
Sbjct: 576  EMNGTEDGRIIIDGANLTISNVTMEDEGIYSCSAHTALDSVADMTQVTVL----DVPDPP 631

Query: 226  KDEYTVD--GKTVVLTCRVFGAPKPE-----VNWIHNQKELTGGRYTILETGDLKITDVA 278
            ++ +  +   ++V LT               V +  N++E   GR+  L     K T V 
Sbjct: 632  ENLHLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEE--PGRWEELTRVQGKETTVV 689

Query: 279  FADSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSAT------ 326
             + +     ++   A N++G +Q S      E         P++  V+A Q         
Sbjct: 690  LSLAPYVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWE 749

Query: 327  -FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
              +    + P L+  + W     P+++E E       +++L V   +         +A  
Sbjct: 750  PLKAMEQNGPGLEYRVTWKPQGAPVEWEEE----TVTNHTLRVMTPAVYAPYDVQVQAIN 805

Query: 386  ELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKAVVSWNPVSPQSLRGHFRGYKVQT 442
             L       ++ +    + P    +IQ   VI++    V+W+ +  + + GH +GY+V  
Sbjct: 806  HLGSGPEPQSVILYSGEDYPDAAPVIQGVDVINSTLVKVTWSTIPKERVHGHLKGYQVNW 865

Query: 443  WTEK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
            W  K   DG    +E+ + +  G+     V      S+    VLA+N    GP SE   F
Sbjct: 866  WKTKSLLDGRTHPKEVNILRFSGQRDYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPFIF 925

Query: 498  VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERL 556
             TPEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T ++G L +  
Sbjct: 926  QTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGNLTGYLLQYQIINDTDEIGELNDI- 984

Query: 557  PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
              I+ P+  S +L  L  +TKY+ +L   T  G G
Sbjct: 985  -NITTPSKPSWRLLNLSATTKYKFYLRACTSKGCG 1018



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 157/395 (39%), Gaps = 62/395 (15%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSD-RISQGNYGKSLIIK---HVEFSDQGSYTCEVS 107
           ++ C+  G P P+ +W+KD  P N SD RI   N G +  I    H+    QG Y C  S
Sbjct: 54  QIECVAKGNPEPKFLWNKDDKPFNLSDPRIIVSNNGGTFRIPNDGHISHF-QGKYRCFAS 112

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGK 164
           N +G A S  I+  V  AP F  E  + +   E + +   C    GLP   I+W++   +
Sbjct: 113 NKLGIAMSEEIEFIVPNAPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELE 172

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA 218
            I Q       + G   +   N+ + D+ N Y C A        +  +   + VN L H 
Sbjct: 173 HIEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHV 230

Query: 219 --------------------PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNW 252
                               P +   P +  +      + G T++L C   G P P+V+W
Sbjct: 231 NDSSSSTEIISKANSIKQRKPRLLLPPPESGSESFVTILKGDTLLLECFAEGLPTPQVDW 290

Query: 253 IHNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT 311
                +L  GR T    G  LKI +V+  D G Y C A N LG+A     +TV+E  H T
Sbjct: 291 NKMGGDLPKGRETKENYGKTLKIENVSSQDKGTYRCTASNVLGSATHDFQVTVEEPPHWT 350

Query: 312 DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKS 371
            +P+      G S    C A  +P  + +I W     PI         + N YS  V   
Sbjct: 351 KKPQSGVYSTGSSGILLCEAEGEP--EPTIKWRVNGLPI---------ERNPYSGDVMSP 399

Query: 372 SELD--------SGQYTCRAQTELDFIEAQATLTV 398
            E+         +  Y C A      I A A + V
Sbjct: 400 GEISFTNVQPNHTAVYQCEATNVHGTILANANIDV 434



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 119/311 (38%), Gaps = 51/311 (16%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN----RITIENLRKSDTGNY 195
           +E    EC A G PEP+  W  + KP + +  +PR  V  N    RI  +       G Y
Sbjct: 50  DEYFQIECVAKGNPEPKFLWNKDDKPFNLS--DPRIIVSNNGGTFRIPNDGHISHFQGKY 107

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A+N LG    +    ++ +AP+  +   D   V +G  +VL C    G P   + W+
Sbjct: 108 RCFASNKLGIAMSEEIEFIVPNAPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWM 167

Query: 254 HNQKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEH 307
           + + E      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV   
Sbjct: 168 NIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSL 227

Query: 308 THITDQPEDYEVEA-----------------------------GQSATFRCNAVSDPSLK 338
            H+ D     E+ +                             G +    C A   P+ +
Sbjct: 228 KHVNDSSSSTEIISKANSIKQRKPRLLLPPPESGSESFVTILKGDTLLLECFAEGLPTPQ 287

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           +    + G  P   E++  + +    +L +   S  D G Y C A   L      AT   
Sbjct: 288 VDWNKMGGDLPKGRETKENYGK----TLKIENVSSQDKGTYRCTASNVL----GSATHDF 339

Query: 399 QVPLEAPSNFT 409
           QV +E P ++T
Sbjct: 340 QVTVEEPPHWT 350


>gi|326928158|ref|XP_003210248.1| PREDICTED: contactin-4-like [Meleagris gallopavo]
          Length = 1063

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 174/635 (27%), Positives = 269/635 (42%), Gaps = 56/635 (8%)

Query: 47  RNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           +   V+L C   G P+P   W + DG  I    R  + N    L I + +  D G Y C 
Sbjct: 273 KGTAVKLECFALGNPVPTISWRRADGKQIPRKARRHRSN--GLLEIPNFQQEDAGLYECV 330

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             N  G+  +    L+  A P +  +   ++AA EE V +EC ASG P+P   W+ +G+P
Sbjct: 331 AENVRGKNVARG-QLTFYAQPNWIQKISDVHAAIEENVFWECHASGRPKPSYRWLKDGEP 389

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +    P  R ++    +TI N+  SD G Y C A N  G ++    ++V+A  P+ ++  
Sbjct: 390 LL---PQGRVQIEQGSLTIRNVSLSDAGMYQCVAENRHGTIFASAELSVIAVGPDFSKTL 446

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADS 282
             + T+   G  V++ C+   +P+P  +W   +  L    R T+L+ G L+I +V  +D+
Sbjct: 447 LKKLTLVKVGGEVIIECKPKASPRPAYSWKKGKDILRENERITVLDDGSLRIVNVTKSDT 506

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A N  GTA  +GSL VK+ T +   P   +V  G+S    C    D SL +   
Sbjct: 507 GSYTCVATNHFGTASSTGSLVVKDPTRVMVSPFSMDVTVGESIVLPCQVSHDHSLDIVFT 566

Query: 343 WLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           W      IDFE +         Q +   L +       +G+Y C  QT +D I A A L 
Sbjct: 567 WSFNGHLIDFEKDGDHFEKVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKISAAADLI 626

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGE 449
           V+ P   P + T+ ++ D   A +SW P     SP ++      Y VQ  T         
Sbjct: 627 VRGPPGPPEDVTIDEITDT-TAQLSWRPGADNHSPITM------YVVQARTPFSVGWQAV 679

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTP 500
            ++ E+I   G + T  V    P  +   RV+A N    G PS         E +  VTP
Sbjct: 680 STVPEVIXIDGRTFTATVVGLNPWVEYEFRVVAANLIGIGEPSRPSENRRTEEALPEVTP 739

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
             V G   S        S   + W  V  E  NG   GY + ++          ++ +  
Sbjct: 740 ANVSGGGGS-------KSELVITWETVPEELQNGGGFGYVVAFRPFGTIS---WMQTVVA 789

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGS 613
             D +    +   L P + Y + +  Y   G+G+ S           P + P  V  R  
Sbjct: 790 SPDASRYVFRNESLPPFSPYEVKVGVYNNKGEGSFSPVTVVYSAEEEPTRAPITVLARSL 849

Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
           +  ++ ISW    E +H      Y +   RH+  E
Sbjct: 850 SATDIEISWAPPRENQHKGRIQGYEVRCWRHDEKE 884



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 170/657 (25%), Positives = 257/657 (39%), Gaps = 87/657 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V  ++       ++           P   V+ PE + +
Sbjct: 212 NLYIAKVEASDVGNYTCVVTNTVTNSRVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPS 271

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+   V  EC A G P P I W   +GK   Q P   RR      + I N ++ D G Y 
Sbjct: 272 AKGTAVKLECFALGNPVPTISWRRADGK---QIPRKARRHRSNGLLEIPNFQQEDAGLYE 328

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A N  G       +   A  P   +   D +    + V   C   G PKP   W+ + 
Sbjct: 329 CVAENVRGKNVARGQLTFYAQ-PNWIQKISDVHAAIEENVFWECHASGRPKPSYRWLKDG 387

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           + L       +E G L I +V+ +D+G Y C A N+ GT   S  L+V     I   P+ 
Sbjct: 388 EPLLPQGRVQIEQGSLTIRNVSLSDAGMYQCVAENRHGTIFASAELSV-----IAVGPDF 442

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
            +        V+ G      C   + P    S  W +G + I  E+E R    +D SL +
Sbjct: 443 SKTLLKKLTLVKVGGEVIIECKPKASPRPAYS--WKKGKD-ILRENE-RITVLDDGSLRI 498

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV------- 421
              ++ D+G YTC A        +  +L V+ P     +   + V   +  V+       
Sbjct: 499 VNVTKSDTGSYTCVATNHFGTASSTGSLVVKDPTRVMVSPFSMDVTVGESIVLPCQVSHD 558

Query: 422 -SWNPVSPQSLRGHFRGYKV--QTWTEKDGEGSIRELIVNKGE---------STTTEVDK 469
            S + V   S  GH   ++     + +  G+ S  +L++   +            T VDK
Sbjct: 559 HSLDIVFTWSFNGHLIDFEKDGDHFEKVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDK 618

Query: 470 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS--SAFYLKWVKP 527
              A+    R         GPP +    VT + +  T   L   P     S   +  V+ 
Sbjct: 619 ISAAADLIVR------GPPGPPED----VTIDEITDTTAQLSWRPGADNHSPITMYVVQA 668

Query: 528 EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
             P      + + +Q+V      P +  +    D  T +A + GL P  +Y   +     
Sbjct: 669 RTP------FSVGWQAVSTV---PEVIXI----DGRTFTATVVGLNPWVEYEFRVVAANL 715

Query: 588 AGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F Y + +
Sbjct: 716 IGIGEPSRPSENRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGGGFGYVVAF 775

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
           R   T  +W Q  V     S  V  N+  P F PYE+K V  +  K GEGS   + V
Sbjct: 776 RPFGT-ISWMQTVVASPDASRYVFRNESLPPFSPYEVK-VGVYNNK-GEGSFSPVTV 829



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 144/369 (39%), Gaps = 28/369 (7%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  I+            +L+I +  +  D G+Y C  +
Sbjct: 76  KKVKLNCEVKGNPQPTIGWKLNGTNIDIGMDYRYSTVEGNLLINNPNKTQDTGTYQCVAT 135

Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVHN 162
           N  G   S    L       F T     ++  + + +   C   G P    E    W+ N
Sbjct: 136 NPFGRIVSREAKLQFAYLENFKTRVRSTVSVRQGQGMVLLC---GPPPHSGELTYAWIFN 192

Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN- 213
             P S    + RR V      + I  +  SD GNY C  TN+      LG     +  N 
Sbjct: 193 EYP-SFVHQDNRRFVSQETGNLYIAKVEASDVGNYTCVVTNTVTNSRVLGPPTPLILRND 251

Query: 214 --VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILET 269
             +  + P+I  + P+   +  G  V L C   G P P ++W   + K++          
Sbjct: 252 GVMGEYEPKIEVQFPETVPSAKGTAVKLECFALGNPVPTISWRRADGKQIPRKARRHRSN 311

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I +    D+G Y C A N  G     G LT     +   +  D      ++  + C
Sbjct: 312 GLLEIPNFQQEDAGLYECVAENVRGKNVARGQLTFYAQPNWIQKISDVHAAIEENVFWEC 371

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
           +A   P  K S  WL+  EP+  +     VQ    SLT+   S  D+G Y C A+     
Sbjct: 372 HASGRP--KPSYRWLKDGEPLLPQGR---VQIEQGSLTIRNVSLSDAGMYQCVAENRHGT 426

Query: 390 IEAQATLTV 398
           I A A L+V
Sbjct: 427 IFASAELSV 435



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 107/290 (36%), Gaps = 36/290 (12%)

Query: 121 SVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
           ++L  P F  EP    F   +EE+ V   C+  G P+P I W  NG  I          V
Sbjct: 53  NMLHGPVFLQEPSSVIFPLDSEEKKVKLNCEVKGNPQPTIGWKLNGTNIDIGMDYRYSTV 112

Query: 178 GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTV 236
             N +     +  DTG Y C ATN  G +         A+        +   +V  G+ +
Sbjct: 113 EGNLLINNPNKTQDTGTYQCVATNPFGRIVSREAKLQFAYLENFKTRVRSTVSVRQGQGM 172

Query: 237 VLTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTC 287
           VL C     P P        WI N+          R+   ETG+L I  V  +D G YTC
Sbjct: 173 VLLC----GPPPHSGELTYAWIFNEYPSFVHQDNRRFVSQETGNLYIAKVEASDVGNYTC 228

Query: 288 FARNKLGTA-----------QGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              N +  +           +  G +   E       PE      G +    C A+ +P 
Sbjct: 229 VVTNTVTNSRVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPSAKGTAVKLECFALGNPV 288

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYS--LTVTKSSELDSGQYTCRAQ 384
             +S  W R     D +  PR  + +  +  L +    + D+G Y C A+
Sbjct: 289 PTIS--WRRA----DGKQIPRKARRHRSNGLLEIPNFQQEDAGLYECVAE 332



 Score = 47.4 bits (111), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 90/227 (39%), Gaps = 21/227 (9%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP    L + + A    +SW P      +G  +GY+V+ W   + E + R+ I   G
Sbjct: 837  PTRAPIT-VLARSLSATDIEISWAPPRENQHKGRIQGYEVRCWRHDEKEETARK-IRTVG 894

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT----PEGVPGTVQSLEAIPLG 516
              T+ +V      +     V A+N A  GP S +++  T    P   PG +    +    
Sbjct: 895  NQTSAKVTNLQGNALYHLAVKAYNTAGTGPSSAMVNVTTKKPPPSQPPGNIIWNSS---- 950

Query: 517  SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
             S   L W  VK       + GYK+ Y+  + +           + +   TS +L+ L  
Sbjct: 951  DSKIILNWDQVKALDNESEVRGYKVLYRWNRQSSAS--------VIETNRTSVELS-LPF 1001

Query: 575  STKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVIS 621
               Y I +  ++  GDG+ S+ +      N     G  ST N   +S
Sbjct: 1002 DEDYIIEIKPFSDGGDGSSSEQIRIPKISNAYARGGSSSTSNACTLS 1048


>gi|410899487|ref|XP_003963228.1| PREDICTED: neural cell adhesion molecule L1-like [Takifugu
           rubripes]
          Length = 1269

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 188/716 (26%), Positives = 298/716 (41%), Gaps = 73/716 (10%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           ALR + +EL CI  G P P+  W +    ++ S RIS+  + + L   ++  SD G Y C
Sbjct: 265 ALRGQTLELECIVQGLPTPKVSWLRKDGEMSES-RISKDMFDRRLQFTNISESDGGEYQC 323

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N  G    ++  ++V A+PY+T  P     A  ETV  +C+A G+P P I W  NG 
Sbjct: 324 TAENVQGRT-FHTYTVTVEASPYWTNAPVSQLYAPGETVKLDCQADGIPSPTITWTVNGV 382

Query: 165 PISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           P+S     PRR +  +  + ++++   DT  Y C A+N  G +  +  V V+   P+I  
Sbjct: 383 PLSATSLEPRRSLTESGSLILKDVIFGDTAIYQCQASNKHGTILANTNVYVIELPPQILT 442

Query: 224 APKDEYT-VDGKTVVLTCRVFGAPKPEVNWIHNQKEL--TGGRYTILETGDLKITDVAFA 280
              + YT V+G+  +L C  FG+PKP+V W  +   L     R  +L  G L+I +V+  
Sbjct: 443 ENGNTYTFVEGQKALLECETFGSPKPKVTWESSSISLLLADPRVNLLTNGGLEIANVSHD 502

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D G YTC  +        +  + V   T I   P+   ++ G++A F C  V+DP L   
Sbjct: 503 DEGIYTCLVQG--SNISVNAEVEVLNRTVILSPPQALRLQPGKTAIFTCLYVTDPKLSSP 560

Query: 341 IVWLRGSEPIDFESEPRFVQSNDY-SLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           ++  R ++   FES      + D   L ++     D G YTC+  T+LD +EA +TLT+ 
Sbjct: 561 LLQWRKNDQKIFESHSDKKYTFDGPGLIISNVEPGDEGVYTCQIITKLDMVEASSTLTL- 619

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P     +QV +AK  VV+ N             Y V+   +   E    EL    
Sbjct: 620 --CDRPDPPVHLQVTNAKHRVVTLNWTPGDDNNSPILEYVVEFEDQDMKENGWEELKRVA 677

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-----TPEGVPGTVQSLEAIP 514
            +     +  +   S  F RV+A N      PS++          P+  P  V+S    P
Sbjct: 678 ADKKHVNLPLWPYMSYRF-RVIAINDQGKSDPSKLSDLYKTPADAPDSNPEDVRSESTDP 736

Query: 515 LGSSAFYLKWVKPEQPN--GVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGL 572
                  + W + ++ N  G    Y + ++ V G+  GP       I+ P      +  +
Sbjct: 737 ---DTLVITWEEMDKRNFNGPDFKYLVMWRRVVGS--GPDWHEEYTIAPPFI----VTDV 787

Query: 573 EPSTKYRIHLAGYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPE 627
           +  + + I +    K G G E   +       VP + P N+         + ++W A+ +
Sbjct: 788 QNFSAFEIKVQAVNKKGLGPEPDPIIGYSGEDVPLEAPLNLGVLLENSTTIRVTWAAVDK 847

Query: 628 IEHNAPHFKYRIF--WRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEK 685
                    Y+I+  W  H    A                      +P  I +VQT    
Sbjct: 848 ETVRGHLLGYKIYLTWGHHRNSRAQ---------------------EPENIVMVQT---- 882

Query: 686 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
            G    ++ I N             P       + AFN    GP SE  SF+TPEG
Sbjct: 883 -GANEEKKSITN-----------LRPYCHYDLAISAFNSKGEGPLSEKTSFMTPEG 926



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 128/280 (45%), Gaps = 24/280 (8%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TW-TEKDGEGSIRELIV 457
            VPLEAP N  ++ + ++    V+W  V  +++RGH  GYK+  TW   ++      E IV
Sbjct: 820  VPLEAPLNLGVL-LENSTTIRVTWAAVDKETVRGHLLGYKIYLTWGHHRNSRAQEPENIV 878

Query: 458  NKGESTTTE---VDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                    E   +    P       + AFN    GP SE  SF+TPEGVPG   S++   
Sbjct: 879  MVQTGANEEKKSITNLRPYCHYDLAISAFNSKGEGPLSEKTSFMTPEGVPGPPMSMQMTS 938

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
               S   L W  P +PNG+L+GY ++Y+ ++     PL  ++  I+ P  T   L GL+ 
Sbjct: 939  PSESEITLHWTPPSKPNGILLGYSLQYRKMQSDD-NPL--QVVDIASPEITHLTLKGLDR 995

Query: 575  STKYRIHLAGYTKAGDGAESKYLFYVPFKN--PDNVEGRGSTPNNLVISWTAMPEIEHNA 632
             + Y+  L   T AG G   + L     +   P N+    +   ++ +SW A     H  
Sbjct: 996  HSHYQFLLMARTAAGKGLSIEILGATTLEGLPPANI-SLSAEERSVNLSWEA--RKRHRT 1052

Query: 633  PHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
              F+   F          +++D   W+++E+V ++   FQ
Sbjct: 1053 VGFQIHYF----------SKNDGGKWKKTEMVNSSLQFFQ 1082



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 165/394 (41%), Gaps = 40/394 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSD----RISQGNYGKSLIIKHVEFSD-----QGSYT 103
           + C   G P P   W+KDG   +PS     ++++   G S+        D     QG Y 
Sbjct: 65  MRCEASGNPSPTFHWTKDGEEFDPSSDPEMKVTE-EAGSSVFYTLSNTMDTLKQYQGKYI 123

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEE-ETVTFECK-ASGLPEPEIHWVH 161
           C  SN +G A S +  L + A P    E +    AE   ++   C       +P IHW+ 
Sbjct: 124 CYASNELGTAVSNAAVLMIDAPPVQQKEKKVTEKAEAGHSIALSCNPPQSSMQPIIHWMD 183

Query: 162 NGKPISQAPPNPRRKVGPN-RITIENLRKSDTGN-YGCN----ATNSLGYVYKDVYVNV- 214
           N   +     + R  VG +  +   NL   D+ N Y CN    AT ++    + + + V 
Sbjct: 184 NR--LRHIRLSDRVMVGKDGNLYFANLLTEDSRNDYTCNIQYLATRTI-LAKEPITLTVN 240

Query: 215 ------LAHAPEI---TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
                     P++   T +    + + G+T+ L C V G P P+V+W+    E++  R +
Sbjct: 241 PSNLVPRNRRPQMMRPTGSHSTYHALRGQTLELECIVQGLPTPKVSWLRKDGEMSESRIS 300

Query: 266 I-LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
             +    L+ T+++ +D GEY C A N  G    + ++TV+   + T+ P       G++
Sbjct: 301 KDMFDRRLQFTNISESDGGEYQCTAENVQGRTFHTYTVTVEASPYWTNAPVSQLYAPGET 360

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFES-EPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
               C A   PS   +I W     P+   S EPR   +   SL +      D+  Y C+A
Sbjct: 361 VKLDCQADGIPS--PTITWTVNGVPLSATSLEPRRSLTESGSLILKDVIFGDTAIYQCQA 418

Query: 384 QTELDFIEAQATLTV-----QVPLEAPSNFTLIQ 412
             +   I A   + V     Q+  E  + +T ++
Sbjct: 419 SNKHGTILANTNVYVIELPPQILTENGNTYTFVE 452



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 118/289 (40%), Gaps = 38/289 (13%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN----- 180
           P  T +PE +     E +   C+ASG P P  HW  +G+    +  +P  KV        
Sbjct: 46  PAITTQPESVTVFSVEDLVMRCEASGNPSPTFHWTKDGEEFDPS-SDPEMKVTEEAGSSV 104

Query: 181 ----RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKD--EYTVDGK 234
                 T++ L++   G Y C A+N LG    +  V ++  AP + +  K   E    G 
Sbjct: 105 FYTLSNTMDTLKQYQ-GKYICYASNELGTAVSNAAV-LMIDAPPVQQKEKKVTEKAEAGH 162

Query: 235 TVVLTCR-VFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFADS-GEYTC--- 287
           ++ L+C     + +P ++W+ N+        R  + + G+L   ++   DS  +YTC   
Sbjct: 163 SIALSCNPPQSSMQPIIHWMDNRLRHIRLSDRVMVGKDGNLYFANLLTEDSRNDYTCNIQ 222

Query: 288 FARNKLGTAQGSGSLTVKEHTHI-----------TDQPEDYEVEAGQSATFRCNAVSDPS 336
           +   +   A+   +LTV     +           T     Y    GQ+    C     P+
Sbjct: 223 YLATRTILAKEPITLTVNPSNLVPRNRRPQMMRPTGSHSTYHALRGQTLELECIVQGLPT 282

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSN-DYSLTVTKSSELDSGQYTCRAQ 384
            K+S  WLR    +   SE R  +   D  L  T  SE D G+Y C A+
Sbjct: 283 PKVS--WLRKDGEM---SESRISKDMFDRRLQFTNISESDGGEYQCTAE 326


>gi|219518168|gb|AAI44187.1| Contactin 5 [Homo sapiens]
          Length = 1100

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 164/611 (26%), Positives = 262/611 (42%), Gaps = 49/611 (8%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           A +   V++ C   G P+P   W K    +P     R SQ      L I +V+  D G Y
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQA----VLEIPNVQLDDAGIY 367

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C   N   E  S+   L V   P++  +           + +ECKA+G P P   W+ N
Sbjct: 368 ECRAENS-REKNSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKN 426

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--E 220
           G P+S   P  R ++    + I N+ +SD G Y C A N  G +Y    + +LA AP   
Sbjct: 427 GVPLS---PQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFA 483

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
           + +  K       + VV+ C+  G+PKP ++W    + +    R  IL  G L+I + + 
Sbjct: 484 LNQLKKTIIVTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASK 543

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           +D G+Y C   N  G+A+   SL+VKE T I   P+  E+  G+S    C A+ D SL +
Sbjct: 544 SDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 603

Query: 340 SIVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +  W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A
Sbjct: 604 TFYWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEA 663

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKD 447
            L V+ P   P    +++ I    A +SW+P +          Y +Q        W    
Sbjct: 664 ELLVRGP-PGPPGIVIVEEITESTATLSWSPAADN--HSPISSYNLQARSPFSLGWQTVK 720

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGT 506
              ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T
Sbjct: 721 ---TVPEIITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKT 775

Query: 507 VQSLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISD 561
             +  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+
Sbjct: 776 APTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSE 830

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPN 616
            +    +   + P T + + +  Y   GDG  S+ +        P   P +V+    + +
Sbjct: 831 ASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVS 890

Query: 617 NLVISWTAMPE 627
            ++++W  + E
Sbjct: 891 EILVAWKHIKE 901



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 159/650 (24%), Positives = 240/650 (36%), Gaps = 76/650 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + A
Sbjct: 253 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 312

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I N++  D G Y 
Sbjct: 313 AKGTTVKMECFALGNPVPTITWMKVNG----YIPSKARLRKSQAVLEIPNVQLDDAGIYE 368

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS         + V  + P   E   D     G  +   C+  G P+P   W+ N 
Sbjct: 369 CRAENSREKNSFRGQLQVYTY-PHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG 427

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITDQ 313
             L+      +  G L I +V  +D+G Y C A NK G    S  L +        +   
Sbjct: 428 VPLSPQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQL 487

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +   V   Q     C     P  K +I W +G   +      R     D SL +  +S+
Sbjct: 488 KKTIIVTKDQEVVIECKPQGSP--KPTISWKKGDRAV--RENKRIAILPDGSLRILNASK 543

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI----------QVIDAKKAV 420
            D G+Y CR +      E  A+L+V+ P      P    L            + DA   V
Sbjct: 544 SDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 603

Query: 421 VSW-----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
             +      P+  +   GHF   + Q       +  IR +++         V     +  
Sbjct: 604 TFYWTLKGQPIDFEEEGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQTTADSVS 660

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
           + A +L       GPP          G PG V   E   +  S   L W      +  + 
Sbjct: 661 DEAELLV-----RGPP----------GPPGIVIVEE---ITESTATLSWSPAADNHSPIS 702

Query: 536 GYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y ++ +S     +G   ++ +P I      SA    L P  +Y   +      G G  S
Sbjct: 703 SYNLQARS--PFSLGWQTVKTVPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPS 760

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P NV GR    + LVI+W  + E   N   F Y + +R + T  
Sbjct: 761 TPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT-R 819

Query: 649 AWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
            W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V
Sbjct: 820 GWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVV 867



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 148/394 (37%), Gaps = 39/394 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           KKV L C   G P+P   W ++G  I+  SD       G  +I    E  D G Y C  +
Sbjct: 117 KKVALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLAT 176

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N VG   S    L       F+      ++  E + V   C      PE    WV N  P
Sbjct: 177 NTVGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 236

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
            S    + RR +      + I  ++ SD G+Y C   N++                  V 
Sbjct: 237 -SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVM 295

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            +    +  H P    A K      G TV + C   G P P + W+     +        
Sbjct: 296 GEYEPKIEVHFPFTVTAAK------GTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK 349

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               L+I +V   D+G Y C A N        G L V  + H  ++  D ++++G    +
Sbjct: 350 SQAVLEIPNVQLDDAGIYECRAENSREKNSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRW 409

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  + +  WL+   P+  +S    V      L +   ++ D+G Y C A+ + 
Sbjct: 410 ECKATGKP--RPTYRWLKNGVPLSPQSRVEMVNG---VLMIHNVNQSDAGMYQCLAENKY 464

Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
             I A A L +   L +   F L Q+   KK ++
Sbjct: 465 GAIYASAELKI---LASAPTFALNQL---KKTII 492



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 125/297 (42%), Gaps = 35/297 (11%)

Query: 113 AKSYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
           + ++  D SV   P F  EP+   F   ++E+ V   C+  G P P   W+ NG  I   
Sbjct: 86  SDAFKQDESVDYGPVFVQEPDDIIFPTDSDEKKVALNCEVRGNPVPSYRWLRNGTEI-DL 144

Query: 170 PPNPRRKVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
             + R  +      I N  ++ D+G+Y C ATN++G +         A+    +   +  
Sbjct: 145 ESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNTVGSILSREATLQFAYLGNFSGRTRSA 204

Query: 229 YTV-DGKTVVLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVA 278
            +V +G+ VVL C    +P P       +W+ N+          R+   ETG+L I+ V 
Sbjct: 205 VSVREGQGVVLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQ 260

Query: 279 FADSGEYTCFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATF 327
            +D G Y C  +N +  A+       LT++    + +     EV          G +   
Sbjct: 261 TSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKM 320

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
            C A+ +P    +I W++ +  I  ++  R  Q+    L +      D+G Y CRA+
Sbjct: 321 ECFALGNPV--PTITWMKVNGYIPSKARLRKSQA---VLEIPNVQLDDAGIYECRAE 372



 Score = 46.2 bits (108), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  ++++V + C   G+P P   W K    +  + RI+    G SL I +   SD+
Sbjct: 488 KKTIIVTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDG-SLRILNASKSDE 546

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEI 157
           G Y C   N  G A+  +  LSV       + P+       E++   CKA      +   
Sbjct: 547 GKYVCRGENVFGSAEIIA-SLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 605

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          + R +     + I N+     G YGC
Sbjct: 606 YWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGC 650


>gi|126327110|ref|XP_001364316.1| PREDICTED: contactin-5 [Monodelphis domestica]
          Length = 1015

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 168/612 (27%), Positives = 264/612 (43%), Gaps = 51/612 (8%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           A +   V++ C   G P+P   W K    +P     R SQG     L I +V+  D G Y
Sbjct: 227 AAKGMTVKMECFALGNPVPTISWMKVNGYIPSKARLRKSQG----VLEIPNVQLDDAGIY 282

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C   N  G   S+   L V   P++  +    +      + +ECKA+G P P   W+ N
Sbjct: 283 ECRAENSRGR-NSFRGQLQVYNYPHWVEKLNDTHLDSGSALRWECKATGKPRPTYRWLKN 341

Query: 163 GKPI-SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE- 220
           G P+ SQ+    R ++    + I N+ +SD G Y C A N  G +Y    + VLA AP  
Sbjct: 342 GVPLLSQS----RVEMVNGILMIHNVNQSDAGMYQCLAENKYGSIYASAELKVLASAPAF 397

Query: 221 -ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVA 278
            + +  K      G+ V++ C+  G+PKP ++W    K +    R  IL  G L+I + +
Sbjct: 398 ALNQLKKTIIITKGQEVLIECKPQGSPKPTISWKKGDKAVRESKRIAILPDGSLRILNAS 457

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            +D G+Y C   N  G+A+   S+ VKE T I   P+  E+  G+S    C A+ D SL 
Sbjct: 458 KSDEGKYICQGENVFGSAEILASVFVKEPTRIELTPKRTELTVGESVVLNCKAIHDTSLD 517

Query: 339 LSIVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393
           +S  W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +
Sbjct: 518 VSFYWTLKGQPIDFEKERGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDE 577

Query: 394 ATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEK 446
           A L V+ P   P    +++ I    A +SW+P +          Y +Q        W   
Sbjct: 578 ADLLVRGP-PGPPGIVIVEEITETTATLSWSPAADN--HSPISSYNLQARSPFSLGWQTV 634

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP 
Sbjct: 635 K---TVPEVITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPK 689

Query: 506 TVQSLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYIS 560
           T  +  +   G      + W  V  E  NG   GY + ++    +G K     E++   S
Sbjct: 690 TAPANVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSS 744

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTP 615
           D +    +   + P T + + +  Y   GDG  S  +        P   P +V+    + 
Sbjct: 745 DASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSNIVVICSAEGEPSAAPTDVKATSLSV 804

Query: 616 NNLVISWTAMPE 627
           + ++++W  + E
Sbjct: 805 SEILVAWKHIKE 816



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 155/636 (24%), Positives = 235/636 (36%), Gaps = 82/636 (12%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  V+ SD GSY C V N V  A+  S    +            P   V  P  + A
Sbjct: 168 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPYMVTA 227

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I N++  D G Y 
Sbjct: 228 AKGMTVKMECFALGNPVPTISWMKVNG----YIPSKARLRKSQGVLEIPNVQLDDAGIYE 283

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V  + P   E   D +   G  +   C+  G P+P   W+ N 
Sbjct: 284 CRAENSRGRNSFRGQLQVYNY-PHWVEKLNDTHLDSGSALRWECKATGKPRPTYRWLKNG 342

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITDQ 313
             L       +  G L I +V  +D+G Y C A NK G+   S  L V        +   
Sbjct: 343 VPLLSQSRVEMVNGILMIHNVNQSDAGMYQCLAENKYGSIYASAELKVLASAPAFALNQL 402

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +   +  GQ     C     P  K +I W +G + +      R     D SL +  +S+
Sbjct: 403 KKTIIITKGQEVLIECKPQGSP--KPTISWKKGDKAV--RESKRIAILPDGSLRILNASK 458

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI---QVIDAKKAV------- 420
            D G+Y C+ +      E  A++ V+ P      P    L     V+   KA+       
Sbjct: 459 SDEGKYICQGENVFGSAEILASVFVKEPTRIELTPKRTELTVGESVVLNCKAIHDTSLDV 518

Query: 421 -----VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
                +   P+  +  RGHF   + Q       +  IR +++         V     +  
Sbjct: 519 SFYWTLKGQPIDFEKERGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQTTADSVS 575

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS-----SAFYLKWVKPEQP 530
           + A +L       GPP  +I     E +  T  +L   P        S++ L+   P   
Sbjct: 576 DEADLLVRGPP--GPPGIVIV----EEITETTATLSWSPAADNHSPISSYNLQARSP--- 626

Query: 531 NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGD 590
                 + + +Q+VK          +P +      SA    L P  +Y   +      G 
Sbjct: 627 ------FSLGWQTVK---------TVPEVITGDMESAMAVDLNPWVEYEFRVVATNPIGT 671

Query: 591 GAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           G  S      +    VP   P NV GR    + LVI+W  + E   N   F Y + +R +
Sbjct: 672 GDPSTPSRMIRTNEAVPKTAPANVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPN 731

Query: 645 NTGEAWNQDDVLDWRQSELVLANQ--PTFQPYEIKV 678
            T   W +  V     S+ +  ++  P   P+E+KV
Sbjct: 732 GT-RGWKEKMVTSSDASKFIYRDESVPPLTPFEVKV 766



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 152/662 (22%), Positives = 258/662 (38%), Gaps = 90/662 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+GVP+    R+   N    L+I +V  SD G Y C   N  G   
Sbjct: 326 CKATGKPRPTYRWLKNGVPLLSQSRVEMVN--GILMIHNVNQSDAGMYQCLAENKYGSIY 383

Query: 115 SYSIDLSVLA-APYFTVE--PEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L VLA AP F +    + I   + + V  ECK  G P+P I W    K + ++  
Sbjct: 384 A-SAELKVLASAPAFALNQLKKTIIITKGQEVLIECKPQGSPKPTISWKKGDKAVRESK- 441

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP-EITEAPKDEY 229
             R  + P+  + I N  KSD G Y C   N  G    ++  +V    P  I   PK   
Sbjct: 442 --RIAILPDGSLRILNASKSDEGKYICQGENVFGSA--EILASVFVKEPTRIELTPKRTE 497

Query: 230 TVDGKTVVLTCRVFGAPKPEVNWIHNQK------ELTGGRYTILE----TGDLKITDVAF 279
              G++VVL C+       +V++    K      E   G +  +     + DL I ++  
Sbjct: 498 LTVGESVVLNCKAIHDTSLDVSFYWTLKGQPIDFEKERGHFESIRAQASSADLMIRNILL 557

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE--AGQSATFRCNAVSDPSL 337
             +G Y C  +    +      L V+        P    VE     +AT   +  +D   
Sbjct: 558 MHAGRYGCRVQTTADSVSDEADLLVRGPP---GPPGIVIVEEITETTATLSWSPAADNHS 614

Query: 338 KLSIVWLRGSEPIDF-----ESEPRFVQSN-------------DYSLTVTKSSELDSGQY 379
            +S   L+   P        ++ P  +  +             +Y   V  ++ + +G  
Sbjct: 615 PISSYNLQARSPFSLGWQTVKTVPEVITGDMESAMAVDLNPWVEYEFRVVATNPIGTGD- 673

Query: 380 TCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYK 439
                T    I         VP  AP+N +  +     + V++W PVS +   G   GY 
Sbjct: 674 ---PSTPSRMIRTNEA----VPKTAPANVSG-RSGRRHELVIAWEPVSEEFQNGEGFGYI 725

Query: 440 VQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF-ARVLAFNGAYNGPPSEIISFV 498
           V  +      G   +++ +   S     D+ VP    F  +V  +N   +GP S I+   
Sbjct: 726 V-AFRPNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSNIVVIC 784

Query: 499 TPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY-------QSVKGTKVG 550
           + EG P    + ++A  L  S   + W   ++  G   G+++ Y       ++ +  K G
Sbjct: 785 SAEGEPSAAPTDVKATSLSVSEILVAWKHIKESLGRPQGFEVGYWKDMEQEEAAETVKTG 844

Query: 551 PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNP 605
                         +S  L GLE +T Y + +  Y  AG G  S  +        P + P
Sbjct: 845 G-----------NESSIILTGLEGNTLYHLTVRAYNGAGYGPASSEVRAATKKSPPSQAP 893

Query: 606 DNV--EGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSEL 663
            N+  E +GS    + + W  +  + + +    Y++F+R+    E  +   V++ ++++ 
Sbjct: 894 SNIMWEQQGS---QVSLGWEPVRPLANESEVVGYKVFYRQ----EGHSNSQVIETQKTQA 946

Query: 664 VL 665
           V+
Sbjct: 947 VV 948



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 152/394 (38%), Gaps = 39/394 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           KKV L C   G P+P   W ++G  I+  SD       G  +I    E  D G Y C  +
Sbjct: 32  KKVALNCEARGNPVPNYRWLRNGTEIDLESDYRYSLIEGNLIISNPSEAKDSGHYQCLTA 91

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N +G   S    L       F+      ++  E + V   C      PE    WV N  P
Sbjct: 92  NFLGSILSREAVLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 151

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
            S    + RR +      + I  ++ SD G+Y C   N++                  V 
Sbjct: 152 -SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVM 210

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            +    +  H P +  A K      G TV + C   G P P ++W+     +        
Sbjct: 211 GEYEPKIEVHFPYMVTAAK------GMTVKMECFALGNPVPTISWMKVNGYIPSKARLRK 264

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
             G L+I +V   D+G Y C A N  G     G L V  + H  ++  D  +++G +  +
Sbjct: 265 SQGVLEIPNVQLDDAGIYECRAENSRGRNSFRGQLQVYNYPHWVEKLNDTHLDSGSALRW 324

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  + +  WL+   P+  +S    V      L +   ++ D+G Y C A+ + 
Sbjct: 325 ECKATGKP--RPTYRWLKNGVPLLSQSRVEMVNG---ILMIHNVNQSDAGMYQCLAENKY 379

Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
             I A A L V   L +   F L Q+   KK ++
Sbjct: 380 GSIYASAELKV---LASAPAFALNQL---KKTII 407



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 119/294 (40%), Gaps = 34/294 (11%)

Query: 115 SYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           S SI+ SV   P F  EP+   F   ++E+ V   C+A G P P   W+ NG  I     
Sbjct: 4   SVSIE-SVDYGPVFVQEPDDIIFPTDSDEKKVALNCEARGNPVPNYRWLRNGTEIDLESD 62

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
                +  N I        D+G+Y C   N LG +     V   A+    +   +   +V
Sbjct: 63  YRYSLIEGNLIISNPSEAKDSGHYQCLTANFLGSILSREAVLQFAYLGNFSGRTRSAVSV 122

Query: 232 -DGKTVVLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVAFAD 281
            +G+ VVL C    +P P       +W+ N+          R+   ETG+L I+ V  +D
Sbjct: 123 REGQGVVLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSD 178

Query: 282 SGEYTCFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATFRCN 330
            G Y C  +N +  A+       LT++    + +     EV          G +    C 
Sbjct: 179 VGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPYMVTAAKGMTVKMECF 238

Query: 331 AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           A+ +P   +S + + G  P    S+ R  +S    L +      D+G Y CRA+
Sbjct: 239 ALGNPVPTISWMKVNGYIP----SKARLRKSQGV-LEIPNVQLDDAGIYECRAE 287



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 68/172 (39%), Gaps = 23/172 (13%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  + ++V + C   G+P P   W K    +  S RI+    G SL I +   SD+
Sbjct: 403 KKTIIITKGQEVLIECKPQGSPKPTISWKKGDKAVRESKRIAILPDG-SLRILNASKSDE 461

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEE-------ETVTFECKASGL 152
           G Y C+  N  G A+        + A  F  EP  I    +       E+V   CKA   
Sbjct: 462 GKYICQGENVFGSAE--------ILASVFVKEPTRIELTPKRTELTVGESVVLNCKAIHD 513

Query: 153 PEPEI--HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
              ++  +W   G+PI          + R +     + I N+     G YGC
Sbjct: 514 TSLDVSFYWTLKGQPIDFEKERGHFESIRAQASSADLMIRNILLMHAGRYGC 565


>gi|345786242|ref|XP_533760.3| PREDICTED: neural cell adhesion molecule L1-like protein [Canis
           lupus familiaris]
          Length = 1225

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 184/713 (25%), Positives = 306/713 (42%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+   + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 269 LKGDTLLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYGKTLKIENVSYRDRGNYRCT 327

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            +N +G + ++   + V   P++T +P+    +   +    C+A G PEP I W  NG P
Sbjct: 328 ANNFLG-STTHDFHVIVEEPPHWTKKPQSGVYSTGSSGILLCEAEGEPEPTIKWRVNGSP 386

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           I + P      V P  I+  NL+ + T  Y C A+N  G +  +  ++V+   P I    
Sbjct: 387 IDKNP-FAGDVVSPGEISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQTED 445

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
           ++ Y TV G +  L C  F +P P V+W  +   K L G RY I E G L+I      D+
Sbjct: 446 EEHYATVVGYSAFLHCEFFASPDPVVSWQKVDEAKPLEGRRYHIHENGTLQINKTTEDDA 505

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N  G    + +L ++  T +   P++  V    +    C +  DP L+  L 
Sbjct: 506 GSYSCWVENAKGKTAVTANLDIRNATKLQVSPKNPRVPKLHTLELHCESTCDPHLRHSLK 565

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y+C AQT LD +     +TV 
Sbjct: 566 LSWSKNGEAFEINATEDGRIIIDGANLTISNVTSEDQGIYSCSAQTALDSVTDVTQVTVL 625

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +      H   Y V+    K+  G   EL   +
Sbjct: 626 DVPDPPENLHLSERQN-RSVRLTWE--AGDDHNSHISEYIVEFEGNKEEPGRWEELTRVQ 682

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 683 GKETTVML-SLAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQP 741

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 742 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPT 792

Query: 576 T--KYRIHLAGYTKAGDGAESK-YLFYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +      G G E +  + Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 793 VYAPYDVQVQAINHLGSGPEPQSVILYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKD 852

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ +++ ++ +   
Sbjct: 853 RVHGHLKGYQINW--------WKTKSLLDGRT-----------HPKEVNILR-FSGQRNY 892

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
           G +  L            D F   S+    VLA+N    GP SE   F TPEG
Sbjct: 893 GMVPSL------------DAF---SEFHLTVLAYNSKGAGPESEPYIFQTPEG 930



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 139/648 (21%), Positives = 251/648 (38%), Gaps = 71/648 (10%)

Query: 54  FCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113
           +C F   P  +TI  K  +P+              L +  +  ++  S + E+ +     
Sbjct: 202 YCCFAAFPRLRTIVQK--MPMK-------------LTVNSLRHANDSSSSTEIGSKANSI 246

Query: 114 KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           K     L  L  P  +     +   + +T+  EC A GLP P++ W   G  + +     
Sbjct: 247 KQRKPRL--LLPPVESGSESTVTILKGDTLLLECFAEGLPTPQVDWNKIGGDLPKG---- 300

Query: 174 RRKVGPN---RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
            R+   N    + IEN+   D GNY C A N LG    D +V ++   P  T+ P+    
Sbjct: 301 -RETKENYGKTLKIENVSYRDRGNYRCTANNFLGSTTHDFHV-IVEEPPHWTKKPQSGVY 358

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCF 288
             G + +L C   G P+P + W  N   +    +   ++  G++  T++    +  Y C 
Sbjct: 359 STGSSGILLCEAEGEPEPTIKWRVNGSPIDKNPFAGDVVSPGEISFTNLQPNHTAVYQCE 418

Query: 289 ARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           A N  GT   + ++ V +   +  T+  E Y    G SA   C   + P   +S  W + 
Sbjct: 419 ASNVHGTILANANIDVVDVRPLIQTEDEEHYATVVGYSAFLHCEFFASPDPVVS--WQKV 476

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPS 406
            E    E     +  N  +L + K++E D+G Y+C  +         A L ++       
Sbjct: 477 DEAKPLEGRRYHIHENG-TLQINKTTEDDAGSYSCWVENAKGKTAVTANLDIR------- 528

Query: 407 NFTLIQVIDAKKAVVSWNPV---SPQSLRGHFRGYKVQTWTEKDGEG------SIRELIV 457
           N T +QV      V   + +      +   H R     +W+ K+GE           +I+
Sbjct: 529 NATKLQVSPKNPRVPKLHTLELHCESTCDPHLRHSLKLSWS-KNGEAFEINATEDGRIII 587

Query: 458 NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS 517
           +    T + V        + +   A +   +      ++ VT   VP   ++L      +
Sbjct: 588 DGANLTISNVTSEDQGIYSCSAQTALDSVTD------VTQVTVLDVPDPPENLHLSERQN 641

Query: 518 SAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPST 576
            +  L W   +  N  +  Y ++++   G K  P   E L  +    TT   +  L P  
Sbjct: 642 RSVRLTWEAGDDHNSHISEYIVEFE---GNKEEPGRWEELTRVQGKETTV--MLSLAPYV 696

Query: 577 KYRIHLAGYTKAGDGAESKYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEH 630
           +Y+  +    + G    S+   +       P KNP N+  + S P  ++I W  +  +E 
Sbjct: 697 RYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQ 756

Query: 631 NAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           N P  +YR+ W+       W ++ V +     L +     + PY+++V
Sbjct: 757 NGPGLEYRVTWKPQGAPVEWEEETVTN---HTLRVMTPTVYAPYDVQV 801



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 136/573 (23%), Positives = 233/573 (40%), Gaps = 47/573 (8%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
            L C F  +P P   W K         R    +   +L I      D GSY+C V N  G+
Sbjct: 459  LHCEFFASPDPVVSWQKVDEAKPLEGRRYHIHENGTLQINKTTEDDAGSYSCWVENAKGK 518

Query: 113  AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEP----EIHWVHNGKPIS- 167
              + + +L +  A    V P+     +  T+   C+++  P      ++ W  NG+    
Sbjct: 519  T-AVTANLDIRNATKLQVSPKNPRVPKLHTLELHCESTCDPHLRHSLKLSWSKNGEAFEI 577

Query: 168  QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKD 227
             A  + R  +    +TI N+   D G Y C+A  +L  V     V VL    ++ + P++
Sbjct: 578  NATEDGRIIIDGANLTISNVTSEDQGIYSCSAQTALDSVTDVTQVTVL----DVPDPPEN 633

Query: 228  EYTVD--GKTVVLTCRVFGAPKPE-----VNWIHNQKELTGGRYTILETGDLKITDVAFA 280
             +  +   ++V LT               V +  N++E   GR+  L     K T V  +
Sbjct: 634  LHLSERQNRSVRLTWEAGDDHNSHISEYIVEFEGNKEE--PGRWEELTRVQGKETTVMLS 691

Query: 281  DSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSAT-------F 327
             +     ++   A N++G +Q S      E         P++  V+A Q           
Sbjct: 692  LAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPL 751

Query: 328  RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            +    + P L+  + W     P+++E E       +++L V   +         +A   L
Sbjct: 752  KSMEQNGPGLEYRVTWKPQGAPVEWEEE----TVTNHTLRVMTPTVYAPYDVQVQAINHL 807

Query: 388  DFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWT 444
                   ++ +    + P    +I    VI++    V+W+ +    + GH +GY++  W 
Sbjct: 808  GSGPEPQSVILYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGHLKGYQINWWK 867

Query: 445  EK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
             K   DG    +E+ + +  G+     V      S+    VLA+N    GP SE   F T
Sbjct: 868  TKSLLDGRTHPKEVNILRFSGQRNYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQT 927

Query: 500  PEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERLPY 558
            PEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T ++G L +    
Sbjct: 928  PEGVPEQPAFLKVIKVDKDTATLTWGLPKKLNGNLTGYLLQYQIINDTYELGELNDI--N 985

Query: 559  ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            I+ P+  S +L+ L  +TKY+ +L   T  G G
Sbjct: 986  ITTPSKPSWRLSNLNATTKYKFYLRACTSKGCG 1018



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 137/339 (40%), Gaps = 43/339 (12%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P   W+KD  P + SD   I   N G   I      S  QG Y C  SN
Sbjct: 54  QIECEAKGNPEPTFAWTKDDKPFDLSDSRIIVSNNSGTFKIPNEGHISHFQGKYRCFASN 113

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKP 165
            +G A S  I+  V   P F  E  + +   E + +  +C    GLP   I+W++   + 
Sbjct: 114 KLGVAMSEEIEFIVPNVPKFPKEKIDPLEVEEGDPIVLQCNPPKGLPPLHIYWMNIELEH 173

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA- 218
           I Q       + G   +   N+ + D+ N Y C A        +  +   + VN L HA 
Sbjct: 174 IEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLRHAN 231

Query: 219 -------------------PEITEAPKD---EYTV---DGKTVVLTCRVFGAPKPEVNWI 253
                              P +   P +   E TV    G T++L C   G P P+V+W 
Sbjct: 232 DSSSSTEIGSKANSIKQRKPRLLLPPVESGSESTVTILKGDTLLLECFAEGLPTPQVDWN 291

Query: 254 HNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD 312
               +L  GR T    G  LKI +V++ D G Y C A N LG+      + V+E  H T 
Sbjct: 292 KIGGDLPKGRETKENYGKTLKIENVSYRDRGNYRCTANNFLGSTTHDFHVIVEEPPHWTK 351

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID 351
           +P+      G S    C A  +P  + +I W     PID
Sbjct: 352 KPQSGVYSTGSSGILLCEAEGEP--EPTIKWRVNGSPID 388



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 114/309 (36%), Gaps = 47/309 (15%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKP--ISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +E    EC+A G PEP   W  + KP  +S +        G  +I  E       G Y C
Sbjct: 50  DEYFQIECEAKGNPEPTFAWTKDDKPFDLSDSRIIVSNNSGTFKIPNEGHISHFQGKYRC 109

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN 255
            A+N LG    +    ++ + P+  +   D   V +G  +VL C    G P   + W++ 
Sbjct: 110 FASNKLGVAMSEEIEFIVPNVPKFPKEKIDPLEVEEGDPIVLQCNPPKGLPPLHIYWMNI 169

Query: 256 QKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTH 309
           + E      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV    H
Sbjct: 170 ELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLRH 229

Query: 310 ITDQPEDYE-------------------VEAGQSAT----------FRCNAVSDPSLKLS 340
             D     E                   VE+G  +T            C A   P+ ++ 
Sbjct: 230 ANDSSSSTEIGSKANSIKQRKPRLLLPPVESGSESTVTILKGDTLLLECFAEGLPTPQVD 289

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
              + G  P   E++  + +    +L +   S  D G Y C A   L       T    V
Sbjct: 290 WNKIGGDLPKGRETKENYGK----TLKIENVSYRDRGNYRCTANNFL----GSTTHDFHV 341

Query: 401 PLEAPSNFT 409
            +E P ++T
Sbjct: 342 IVEEPPHWT 350


>gi|344287936|ref|XP_003415707.1| PREDICTED: contactin-5 [Loxodonta africana]
          Length = 1109

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 162/612 (26%), Positives = 266/612 (43%), Gaps = 51/612 (8%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           A +   V++ C   G P+P   W K    +P     R SQ      L I +V+  D G+Y
Sbjct: 321 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQA----MLEIPNVQLDDAGTY 376

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C   N  G+  S+   L V   P++  +    +      + +ECKA+G P P   W+ N
Sbjct: 377 ECRAENSRGK-NSFRGQLQVYTYPHWIEKLNDTHLDSGSPLRWECKATGKPRPTYRWLKN 435

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--E 220
           G P+    P  R ++    + I  + +SD G Y C A N  G +Y    + +LA AP   
Sbjct: 436 GVPLL---PQSRVEMVNGVLMIHKVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFA 492

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
           + +  K      G+ V++ C+  G+PKP ++W    K +    R  IL  G L+I + + 
Sbjct: 493 LNQLKKTIIVTKGQEVIVECKPQGSPKPTISWKKGDKAVRENKRIAILPDGSLRIQNASK 552

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           +D G+Y C   N  G+A+   S++VKE T I   P+  E+  G+S    C A+ D SL++
Sbjct: 553 SDEGKYVCQGENVFGSAEIIASVSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLEV 612

Query: 340 SIVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +  W    +PIDFE E        VQ++   L +     + +G+Y CR QT  D +  +A
Sbjct: 613 TFYWTLKGQPIDFEKEGGHFESIRVQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEA 672

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKD 447
            L V+ P   P    +++ I    A +SW P +          Y +Q        W    
Sbjct: 673 ELLVRGP-PGPPGIVIVEEITESTATLSWGPAADN--HSPVSSYNLQARSPFSLGWQTVK 729

Query: 448 GEGSIRELIVNKGEST-TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
              ++ E+I    ES    E++ +V       RV+A N    G PS     + T E VP 
Sbjct: 730 ---TVPEVITGDMESAMAVELNPWVEYE---FRVVATNPIGTGDPSTPSRIIRTNEAVPK 783

Query: 506 TVQSLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYIS 560
           T  +  +   G      + W  V  E  NG   GY + ++    +G K     E++   S
Sbjct: 784 TAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSS 838

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTP 615
           + +    +   + P T + + +  Y   GDG  S+ +        P   P +V+    + 
Sbjct: 839 EASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSV 898

Query: 616 NNLVISWTAMPE 627
           + ++++W  + E
Sbjct: 899 SEILVAWKHIKE 910



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 156/650 (24%), Positives = 242/650 (37%), Gaps = 76/650 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + A
Sbjct: 262 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 321

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I N++  D G Y 
Sbjct: 322 AKGTTVKMECFALGNPVPTITWMKVNG----YIPSKARLRKSQAMLEIPNVQLDDAGTYE 377

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V  + P   E   D +   G  +   C+  G P+P   W+ N 
Sbjct: 378 CRAENSRGKNSFRGQLQVYTY-PHWIEKLNDTHLDSGSPLRWECKATGKPRPTYRWLKNG 436

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITDQ 313
             L       +  G L I  V  +D+G Y C A NK G    S  L +        +   
Sbjct: 437 VPLLPQSRVEMVNGVLMIHKVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQL 496

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +   V  GQ     C     P  K +I W +G + +      R     D SL +  +S+
Sbjct: 497 KKTIIVTKGQEVIVECKPQGSP--KPTISWKKGDKAV--RENKRIAILPDGSLRIQNASK 552

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR- 432
            D G+Y C+ +      E  A+++V+ P          ++   +  V++   +   SL  
Sbjct: 553 SDEGKYVCQGENVFGSAEIIASVSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLEV 612

Query: 433 -----------------GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
                            GHF   +VQ       +  IR +++         V     +  
Sbjct: 613 TFYWTLKGQPIDFEKEGGHFESIRVQA---SSADLMIRNILLMHAGRYGCRVQTTADSVS 669

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
           + A +L       GPP          G PG V   E   +  S   L W      +  + 
Sbjct: 670 DEAELLV-----RGPP----------GPPGIVIVEE---ITESTATLSWGPAADNHSPVS 711

Query: 536 GYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y ++ +S     +G   ++ +P +      SA    L P  +Y   +      G G  S
Sbjct: 712 SYNLQARS--PFSLGWQTVKTVPEVITGDMESAMAVELNPWVEYEFRVVATNPIGTGDPS 769

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P NV GR    + LVI+W  + E   N   F Y + +R + T  
Sbjct: 770 TPSRIIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT-R 828

Query: 649 AWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
            W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V
Sbjct: 829 GWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVV 876



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 156/662 (23%), Positives = 259/662 (39%), Gaps = 90/662 (13%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+GVP+ P  R+   N    L+I  V  SD G Y C   N  G A 
Sbjct: 420  CKATGKPRPTYRWLKNGVPLLPQSRVEMVN--GVLMIHKVNQSDAGMYQCLAENKYG-AI 476

Query: 115  SYSIDLSVLA-APYFTVE--PEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
              S +L +LA AP F +    + I   + + V  ECK  G P+P I W    K + +   
Sbjct: 477  YASAELKILASAPTFALNQLKKTIIVTKGQEVIVECKPQGSPKPTISWKKGDKAVRE--- 533

Query: 172  NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP-EITEAPKDEY 229
            N R  + P+  + I+N  KSD G Y C   N  G    ++  +V    P  I   PK   
Sbjct: 534  NKRIAILPDGSLRIQNASKSDEGKYVCQGENVFGSA--EIIASVSVKEPTRIELTPKRTE 591

Query: 230  TVDGKTVVLTCRVFGAPKPEVNWIHNQK------ELTGGRYTILE----TGDLKITDVAF 279
               G+++VL C+       EV +    K      E  GG +  +     + DL I ++  
Sbjct: 592  LTVGESIVLNCKAIHDASLEVTFYWTLKGQPIDFEKEGGHFESIRVQASSADLMIRNILL 651

Query: 280  ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE--AGQSATFRCNAVSDPSL 337
              +G Y C  +    +      L V+        P    VE     +AT      +D   
Sbjct: 652  MHAGRYGCRVQTTADSVSDEAELLVRGPP---GPPGIVIVEEITESTATLSWGPAADNHS 708

Query: 338  KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD-FIEAQATL 396
             +S   L+   P     +           TV    E+ +G        EL+ ++E +  +
Sbjct: 709  PVSSYNLQARSPFSLGWQ-----------TVKTVPEVITGDMESAMAVELNPWVEYEFRV 757

Query: 397  TVQVPLEAPSNFTLIQVIDAKKAV-------------------VSWNPVSPQSLRGHFRG 437
                P+      T  ++I   +AV                   ++W PVS +   G   G
Sbjct: 758  VATNPIGTGDPSTPSRIIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFG 817

Query: 438  YKVQTWTEKDGEGSIRELIVNKGESTT-TEVDKFVPASKNF-ARVLAFNGAYNGPPSEII 495
            Y V      +G    +E +V   E++     D+ VP    F  +V  +N   +GP S+I+
Sbjct: 818  YIVAF--RPNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIV 875

Query: 496  SFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQ----PNGVLMGYKIKYQSVKGTKVG 550
               + EG P    + ++A  +  S   + W   ++    P G  +GY+   +  + T+  
Sbjct: 876  VICSAEGEPSAAPTDVKATSVSVSEILVAWKHIKESLGRPQGFEVGYRKDMEQEEATET- 934

Query: 551  PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNP 605
                     +    +S  L GLE +T Y   +  Y  AG G  S  +        P + P
Sbjct: 935  -------VKTRGNESSIILTGLEGNTLYHFTVRAYNGAGYGPPSSEVSASTKKSPPSQAP 987

Query: 606  DNV--EGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSEL 663
             N+  E +GS    + + W  +  + + +    Y++F+R+    E  +  +V++ ++ + 
Sbjct: 988  GNLRWEQQGS---QVSLGWEPVRPLANESEVMGYKVFYRQ----EGHSNSEVIETQKPQA 1040

Query: 664  VL 665
            V+
Sbjct: 1041 VV 1042



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 94/392 (23%), Positives = 146/392 (37%), Gaps = 38/392 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           KKV   C     P+P   W ++G  I+  SD       G  +I   +E  D G Y C  +
Sbjct: 129 KKVAFDCEVRSNPVPSYRWFRNGTEIDLESDYRYSLIDGTFIISNPIEAKDSGHYQCLAA 188

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPIS 167
           N  G   S    L       F  +  F+    E  V     +  + +    WV N  P S
Sbjct: 189 NTFGSILSREAILQFAWLDNFEYQFYFMYFLSELLVPPSSHSRNI-QIIYSWVFNEFP-S 246

Query: 168 QAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VYKD 209
               + RR +      + I  ++ SD G+Y C   N++                  V  +
Sbjct: 247 FVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGE 306

Query: 210 VYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILET 269
               +  H P    A K      G TV + C   G P P + W+     +          
Sbjct: 307 YEPKIEVHFPFTVTAAK------GTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQ 360

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
             L+I +V   D+G Y C A N  G     G L V  + H  ++  D  +++G    + C
Sbjct: 361 AMLEIPNVQLDDAGTYECRAENSRGKNSFRGQLQVYTYPHWIEKLNDTHLDSGSPLRWEC 420

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   P  + +  WL+   P+  +S    V      L + K ++ D+G Y C A+ +   
Sbjct: 421 KATGKP--RPTYRWLKNGVPLLPQSRVEMVNG---VLMIHKVNQSDAGMYQCLAENKYGA 475

Query: 390 IEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
           I A A L +   L +   F L Q+   KK ++
Sbjct: 476 IYASAELKI---LASAPTFALNQL---KKTII 501



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/297 (21%), Positives = 114/297 (38%), Gaps = 38/297 (12%)

Query: 113 AKSYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
           ++++  D SV   P F  EP+   F   ++E+ V F+C+    P P   W  NG  I   
Sbjct: 98  SEAFKQDESVDYGPVFVQEPDDVIFPTDSDEKKVAFDCEVRSNPVPSYRWFRNGTEIDLE 157

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
                  +    I    +   D+G+Y C A N+ G        ++L+    +  A  D +
Sbjct: 158 SDYRYSLIDGTFIISNPIEAKDSGHYQCLAANTFG--------SILSREAILQFAWLDNF 209

Query: 230 TVDGKTVVLTCRVFGAPKPE-------VNWIHNQ----KELTGGRYTILETGDLKITDVA 278
                 +     +   P           +W+ N+          R+   ETG+L I+ V 
Sbjct: 210 EYQFYFMYFLSELLVPPSSHSRNIQIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQ 269

Query: 279 FADSGEYTCFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATF 327
            +D G Y C  +N +  A+       LT++    + +     EV          G +   
Sbjct: 270 TSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKM 329

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
            C A+ +P    +I W++ +  I  ++  R  Q+    L +      D+G Y CRA+
Sbjct: 330 ECFALGNPV--PTITWMKVNGYIPSKARLRKSQA---MLEIPNVQLDDAGTYECRAE 381



 Score = 46.6 bits (109), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  + ++V + C   G+P P   W K    +  + RI+    G SL I++   SD+
Sbjct: 497 KKTIIVTKGQEVIVECKPQGSPKPTISWKKGDKAVRENKRIAILPDG-SLRIQNASKSDE 555

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEI 157
           G Y C+  N  G A+  +  +SV       + P+       E++   CKA      E   
Sbjct: 556 GKYVCQGENVFGSAEIIA-SVSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLEVTF 614

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          + R +     + I N+     G YGC
Sbjct: 615 YWTLKGQPIDFEKEGGHFESIRVQASSADLMIRNILLMHAGRYGC 659


>gi|284004976|ref|NP_001164836.1| neural cell adhesion molecule L1 precursor [Oryctolagus cuniculus]
 gi|217418262|gb|ACK44266.1| L1 cell adhesion molecule isoform 2 precursor (predicted)
           [Oryctolagus cuniculus]
          Length = 1247

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 164/576 (28%), Positives = 253/576 (43%), Gaps = 51/576 (8%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L + +V   D G Y 
Sbjct: 248 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLNVGEEDDGEYR 306

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ETV  +C+  G P+PE+ W  NG
Sbjct: 307 CLAENSLGSAR-HAYYITVEAAPYWLHKPQSHLYGPGETVRLDCQVQGRPQPEVTWRING 365

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ + P + + ++    + + N + SDT    C A N  G +  + Y+ V+     I  
Sbjct: 366 IPVDELPKDQKYRIQHGALILSNAQPSDTMVTQCEARNRHGLLLANAYIYVVQLPARILT 425

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
                Y  V+G T  L C+ FGAP P V W+  +    L   R+     G L I D+   
Sbjct: 426 GDNQTYMAVEGSTAHLLCKAFGAPVPTVQWLDEEGTTVLQDERFFPYANGTLGIRDLQAN 485

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VKE T IT  P     + G   TF C A  DPSL+ S
Sbjct: 486 DTGRYFCQAANDQNNVTIMANLQVKEATQITQGPRSAIEKKGARVTFTCQASFDPSLQPS 545

Query: 341 IVW---------LRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           I W         L  S+    E+    + S DYS         D G Y+C A TELD +E
Sbjct: 546 ITWRGDGRDLHELGDSDKYFLEAGRLVIHSLDYS---------DQGNYSCVASTELDEVE 596

Query: 392 AQATLTVQVPLEAPSNFTLIQVID-----AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
           ++A L V   + +P     ++V D       +  +SW+P   +        Y ++   ++
Sbjct: 597 SRAQLLV---VGSPGPVPQLEVSDHHLLKQSQVRLSWSPA--EDHNAPIEKYDIEFEDKE 651

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPG 505
                   L    G  T+  + K  P      RV A N    G PS    + VTPE  P 
Sbjct: 652 MAPEKWYSLGKVPGNQTSATL-KLSPYVHYTFRVTAINKYGPGEPSPASETVVTPEAAPE 710

Query: 506 TV------QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
                   +  E   +  +   L+W+    P    + Y+++++ V GT+ GP  E++  +
Sbjct: 711 KNPVDVKGEGNETNNMVITWKPLRWMDWNAPQ---VQYRVQWRPV-GTQ-GPWQEQI--V 763

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK 595
           SDP    +  +   P   Y I +      G G E +
Sbjct: 764 SDPILVVSNTSTFVP---YEIKVQAVNSQGKGPEPQ 796



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 166/688 (24%), Positives = 267/688 (38%), Gaps = 74/688 (10%)

Query: 51   VELFCIFGGTPLPQTIWSKDGVPIN--PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
            V L C   G P P+  W  +G+P++  P D+  +  +G +LI+ + + SD     CE  N
Sbjct: 345  VRLDCQVQGRPQPEVTWRINGIPVDELPKDQKYRIQHG-ALILSNAQPSDTMVTQCEARN 403

Query: 109  --GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGKP 165
              G+  A +Y I +  L A   T + +   A E  T    CKA G P P + W+   G  
Sbjct: 404  RHGLLLANAY-IYVVQLPARILTGDNQTYMAVEGSTAHLLCKAFGAPVPTVQWLDEEGTT 462

Query: 166  ISQAPPNPRRKVGP---NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPEI 221
            + Q       +  P     + I +L+ +DTG Y C A N    V   +  N+ +  A +I
Sbjct: 463  VLQ-----DERFFPYANGTLGIRDLQANDTGRYFCQAANDQNNV--TIMANLQVKEATQI 515

Query: 222  TEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWIHNQK---ELTGGRYTILETGDLKITD 276
            T+ P+      G  V  TC+    P  +P + W  + +   EL       LE G L I  
Sbjct: 516  TQGPRSAIEKKGARVTFTCQASFDPSLQPSITWRGDGRDLHELGDSDKYFLEAGRLVIHS 575

Query: 277  VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE--DYEVEAGQSATFRCNAVSD 334
            + ++D G Y+C A  +L   +    L V        Q E  D+ +          +   D
Sbjct: 576  LDYSDQGNYSCVASTELDEVESRAQLLVVGSPGPVPQLEVSDHHLLKQSQVRLSWSPAED 635

Query: 335  PSLKLSIVWLRGSEPIDFESEPRFVQSND-YSLTVTKSSELDSG-------QYTCRAQTE 386
             +  +        E  D E E + +     YSL     ++  +         YT R    
Sbjct: 636  HNAPI--------EKYDIEFEDKEMAPEKWYSLGKVPGNQTSATLKLSPYVHYTFRVTAI 687

Query: 387  LDFIEAQ---ATLTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSPQSLRGHFR 436
              +   +   A+ TV  P  AP        +D K         V++W P+          
Sbjct: 688  NKYGPGEPSPASETVVTPEAAPEK----NPVDVKGEGNETNNMVITWKPLRWMDWNAPQV 743

Query: 437  GYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS 496
             Y+VQ W     +G  +E IV+      +    FVP      +V A N    GP  ++++
Sbjct: 744  QYRVQ-WRPVGTQGPWQEQIVSDPILVVSNTSTFVPYE---IKVQAVNSQGKGPEPQVVT 799

Query: 497  FVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGP-- 551
              + E  P     LE +  L SS   + W  V   Q  G L GY + Y  V   +     
Sbjct: 800  GYSGEDYPQVGPELEDVKILNSSTVLVSWLPVDLAQVKGHLRGYNVTYWWVGSQRKHSKR 859

Query: 552  LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF---KNPDNV 608
             + +   +    TTSA L+GL+P + Y + +  +   G G  S+  F  P     +P+ +
Sbjct: 860  HVHKGHVVVPANTTSAILSGLQPYSSYHLEVQAFNGRGLGPASELTFSTPEGVPSHPEAL 919

Query: 609  EGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQ 668
                 +  +L + W   P + HN     Y + +  H  G+   +    D    +L+  N 
Sbjct: 920  HLECQSDTSLKLHWK--PPLSHNGVLTGYMLSY--HPLGDGGQEQLSFDLPDPDLLTHNL 975

Query: 669  PTFQP---YEIKVVQTWTEKDGEGSIRE 693
                P   Y  ++  T  E  GE  ++E
Sbjct: 976  TNLSPNMRYRFQLQATTREGPGEAIVQE 1003



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 158/389 (40%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS----QGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DG+   P + +     Q  +  S  I   + 
Sbjct: 38  RRLVVFPTDDISLKCEASGRPQVQFRWTRDGIHFKPEEELGVTVYQAPHSGSFTITGNNS 97

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F    QG Y C  SN +G A S+ I L    AP +    V+P      E E+V   C  
Sbjct: 98  NFPQRFQGIYRCFASNKLGTAMSHEIQLMAEGAPKWPKERVKPV--EVEEGESVVLPCNP 155

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+ N K I     + R  +G N  +   N+  SD   +Y CNA    +  
Sbjct: 156 PPSAEPLRIYWM-NSK-ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICNAHFPGTRT 213

Query: 205 YVYKD-VYVNVLAHAPEITEAPK---------DEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+             + G+ +VL C   G P P + W+ 
Sbjct: 214 IIQKEPIDLRVKATNSMIDRKPRLLSPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 273

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++ +V   D GEY C A N LG+A+ +  +TV+   +   +
Sbjct: 274 PSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSARHAYYITVEAAPYWLHK 333

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++    C     P  +  + W     P+D   + +  +    +L ++ +  
Sbjct: 334 PQSHLYGPGETVRLDCQVQGRP--QPEVTWRINGIPVDELPKDQKYRIQHGALILSNAQP 391

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A+     + A A +  VQ+P
Sbjct: 392 SDTMVTQCEARNRHGLLLANAYIYVVQLP 420


>gi|440900721|gb|ELR51796.1| Neural cell adhesion molecule L1-like protein, partial [Bos
           grunniens mutus]
          Length = 1210

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 187/714 (26%), Positives = 311/714 (43%), Gaps = 70/714 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+   + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V   D+G+Y C 
Sbjct: 254 LKGDTLLLECFAEGLPTPQVDWNKMGGDL-PKGRETKENYGKTLKIENVSSQDKGTYRCT 312

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   ++V   P++T +P+    +   +    C+A G PEP I W  NG P
Sbjct: 313 ASNVLGSA-THDFQVTVEEPPHWTKKPQSGVYSTGSSGILLCEAEGEPEPTIKWRVNGLP 371

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           I + P +    + P  I+  N++ + T  Y C A+N  G +  +  ++VL   P I  A 
Sbjct: 372 IERNPYS-GDVMSPGEISFTNVQPNHTAVYQCEASNVHGTILANANIDVLDVRPLIQTAD 430

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
           ++ Y TV G +  L C  F +P+  V+W  +   K L G RY + E G L+IT+    D+
Sbjct: 431 EENYATVVGYSAFLHCEFFASPEAIVSWQKVEEAKPLDGRRYHVHENGTLQITETTEEDA 490

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N  G    + +L ++  T++   P++  V    +    C +  D  LK  L 
Sbjct: 491 GSYSCWVENAKGKTAVTANLDIRNATNLRVSPKNPRVPKSHTLELHCESKCDSHLKYSLK 550

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y+C A T LD +     +TV 
Sbjct: 551 LSWSKDGEAFEMNGTEDGRIIIDGANLTISNVTMEDEGIYSCSAHTALDSVADMTQVTVL 610

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +      +   Y V+    K+  G   EL   +
Sbjct: 611 DVPDPPENLHLSERQN-RSVRLTWE--AGDDHNSNISEYIVEFEGNKEEPGRWEELTRVQ 667

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  V    P  +   RV+A N      PS       TP   P    Q++       
Sbjct: 668 GKETTV-VLSLAPYVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQP 726

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 727 KEMIIKWEPLKAMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 777

Query: 576 T--KYRIHLAGYTKAGDGAESK-YLFYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +      G G E +  + Y     PD    ++G     + LV ++W+ +P+ 
Sbjct: 778 VYAPYDVQVQAINHLGSGPEPQSVILYSGEDYPDAAPVIQGVDVINSTLVKVTWSTIPK- 836

Query: 629 EHNAPHFK-YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDG 687
           E    H K Y++ W        W    +LD R             P E+ +++   ++D 
Sbjct: 837 ERVHGHLKGYQVNW--------WKTKSLLDGRT-----------HPKEVNILRFSGQRD- 876

Query: 688 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
            G +  L            D F   S+    VLA+N    GP SE   F TPEG
Sbjct: 877 YGMVPSL------------DAF---SEFHLTVLAYNSKGAGPESEPFIFQTPEG 915



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 127/575 (22%), Positives = 229/575 (39%), Gaps = 68/575 (11%)

Query: 134 FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKS 190
           F+   + +T+  EC A GLP P++ W   G  + +      R+   N    + IEN+   
Sbjct: 250 FVTILKGDTLLLECFAEGLPTPQVDWNKMGGDLPKG-----RETKENYGKTLKIENVSSQ 304

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A+N LG    D  V V    P  T+ P+      G + +L C   G P+P +
Sbjct: 305 DKGTYRCTASNVLGSATHDFQVTV-EEPPHWTKKPQSGVYSTGSSGILLCEAEGEPEPTI 363

Query: 251 NWIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT 308
            W  N   +    Y+  ++  G++  T+V    +  Y C A N  GT   + ++ V +  
Sbjct: 364 KWRVNGLPIERNPYSGDVMSPGEISFTNVQPNHTAVYQCEASNVHGTILANANIDVLDVR 423

Query: 309 HI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
            +  T   E+Y    G SA   C   + P   +S   +  ++P+D     R+    + +L
Sbjct: 424 PLIQTADEENYATVVGYSAFLHCEFFASPEAIVSWQKVEEAKPLDGR---RYHVHENGTL 480

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPV 426
            +T+++E D+G Y+C  +      + +  +T  + +   +N            V   NP 
Sbjct: 481 QITETTEEDAGSYSCWVEN----AKGKTAVTANLDIRNATNLR----------VSPKNPR 526

Query: 427 SPQS----------LRGHFRGYKVQTWTEKDGEG------SIRELIVNKGESTTTEVDKF 470
            P+S             H +     +W+ KDGE           +I++    T + V   
Sbjct: 527 VPKSHTLELHCESKCDSHLKYSLKLSWS-KDGEAFEMNGTEDGRIIIDGANLTISNVTME 585

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
                + +   A +   +      ++ VT   VP   ++L      + +  L W   +  
Sbjct: 586 DEGIYSCSAHTALDSVAD------MTQVTVLDVPDPPENLHLSERQNRSVRLTWEAGDDH 639

Query: 531 NGVLMGYKIKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           N  +  Y ++++   G K  P   E L  +    TT   +  L P  +Y+  +    + G
Sbjct: 640 NSNISEYIVEFE---GNKEEPGRWEELTRVQGKETTV--VLSLAPYVRYQFRVIAMNEVG 694

Query: 590 DGAESKYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
               S    +       P KNP N+  + S P  ++I W  +  +E N P  +YR+ W+ 
Sbjct: 695 RSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKAMEQNGPGLEYRVTWKP 754

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
                 W ++ V +     L +     + PY+++V
Sbjct: 755 QGAPVEWEEETVTN---HTLRVMTPAVYAPYDVQV 786



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 137/575 (23%), Positives = 236/575 (41%), Gaps = 51/575 (8%)

Query: 53   LFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L C F  +P     W K  +  P++   R    +   +L I      D GSY+C V N  
Sbjct: 444  LHCEFFASPEAIVSWQKVEEAKPLD--GRRYHVHENGTLQITETTEEDAGSYSCWVENAK 501

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA---SGLP-EPEIHWVHNGKPI 166
            G+  + + +L +  A    V P+     +  T+   C++   S L    ++ W  +G+  
Sbjct: 502  GKT-AVTANLDIRNATNLRVSPKNPRVPKSHTLELHCESKCDSHLKYSLKLSWSKDGEAF 560

Query: 167  SQ-APPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
                  + R  +    +TI N+   D G Y C+A  +L  V     V VL    ++ + P
Sbjct: 561  EMNGTEDGRIIIDGANLTISNVTMEDEGIYSCSAHTALDSVADMTQVTVL----DVPDPP 616

Query: 226  KDEYTVD--GKTVVLTCRVFGAPKPE-----VNWIHNQKELTGGRYTILETGDLKITDVA 278
            ++ +  +   ++V LT               V +  N++E   GR+  L     K T V 
Sbjct: 617  ENLHLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEE--PGRWEELTRVQGKETTVV 674

Query: 279  FADSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSAT------ 326
             + +     ++   A N++G +Q S      E         P++  V+A Q         
Sbjct: 675  LSLAPYVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWE 734

Query: 327  -FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
              +    + P L+  + W     P+++E E       +++L V   +         +A  
Sbjct: 735  PLKAMEQNGPGLEYRVTWKPQGAPVEWEEE----TVTNHTLRVMTPAVYAPYDVQVQAIN 790

Query: 386  ELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKAVVSWNPVSPQSLRGHFRGYKVQT 442
             L       ++ +    + P    +IQ   VI++    V+W+ +  + + GH +GY+V  
Sbjct: 791  HLGSGPEPQSVILYSGEDYPDAAPVIQGVDVINSTLVKVTWSTIPKERVHGHLKGYQVNW 850

Query: 443  WTEK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
            W  K   DG    +E+ + +  G+     V      S+    VLA+N    GP SE   F
Sbjct: 851  WKTKSLLDGRTHPKEVNILRFSGQRDYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPFIF 910

Query: 498  VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERL 556
             TPEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T ++G L +  
Sbjct: 911  QTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGNLTGYLLQYQIINDTDEIGELNDI- 969

Query: 557  PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
              I+ P+  S +L  L  +TKY+ +L   T  G G
Sbjct: 970  -NITTPSKPSWRLLNLSATTKYKFYLRACTSKGCG 1003



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 158/379 (41%), Gaps = 46/379 (12%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSD-RISQGNYGKSLIIK---HVEFSDQGSYTCEVS 107
           ++ C+  G P P+ +W+KD  P N SD RI   N G +  I    H+    QG Y C  S
Sbjct: 55  QIECVAKGNPEPKFLWNKDDKPFNLSDPRIIVSNNGGTFRIPNDGHISHF-QGKYRCFAS 113

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGK 164
           N +G A S  I+  V  AP F  E  + +   E + +   C    GLP   I+W++   +
Sbjct: 114 NKLGIAMSEEIEFIVPNAPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELE 173

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-NSLGYVYKDVYVNVLAHA---- 218
            I Q       + G   +   N+ + D+ N Y C A    L  + + + + +  ++    
Sbjct: 174 HIEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNSI 231

Query: 219 ----PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE 268
               P +   P +  +      + G T++L C   G P P+V+W     +L  GR T   
Sbjct: 232 KQRKPRLLLPPPESGSESFVTILKGDTLLLECFAEGLPTPQVDWNKMGGDLPKGRETKEN 291

Query: 269 TGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
            G  LKI +V+  D G Y C A N LG+A     +TV+E  H T +P+      G S   
Sbjct: 292 YGKTLKIENVSSQDKGTYRCTASNVLGSATHDFQVTVEEPPHWTKKPQSGVYSTGSSGIL 351

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD--------SGQY 379
            C A  +P  + +I W     PI         + N YS  V    E+         +  Y
Sbjct: 352 LCEAEGEP--EPTIKWRVNGLPI---------ERNPYSGDVMSPGEISFTNVQPNHTAVY 400

Query: 380 TCRAQTELDFIEAQATLTV 398
            C A      I A A + V
Sbjct: 401 QCEASNVHGTILANANIDV 419



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 118/295 (40%), Gaps = 35/295 (11%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN----RITIENLRKSDTGNY 195
           +E    EC A G PEP+  W  + KP + +  +PR  V  N    RI  +       G Y
Sbjct: 51  DEYFQIECVAKGNPEPKFLWNKDDKPFNLS--DPRIIVSNNGGTFRIPNDGHISHFQGKY 108

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A+N LG    +    ++ +AP+  +   D   V +G  +VL C    G P   + W+
Sbjct: 109 RCFASNKLGIAMSEEIEFIVPNAPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWM 168

Query: 254 HNQKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEH 307
           + + E      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV   
Sbjct: 169 NIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSS 228

Query: 308 THITDQ--------PED-----YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFES 354
             I  +        PE        +  G +    C A   P+ ++    + G  P   E+
Sbjct: 229 NSIKQRKPRLLLPPPESGSESFVTILKGDTLLLECFAEGLPTPQVDWNKMGGDLPKGRET 288

Query: 355 EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFT 409
           +  + +    +L +   S  D G Y C A   L      AT   QV +E P ++T
Sbjct: 289 KENYGK----TLKIENVSSQDKGTYRCTASNVL----GSATHDFQVTVEEPPHWT 335


>gi|395815721|ref|XP_003781372.1| PREDICTED: contactin-5 [Otolemur garnettii]
          Length = 1110

 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 165/611 (27%), Positives = 263/611 (43%), Gaps = 49/611 (8%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           A +   V++ C   G P+P   W K    +P     R SQ      L I +V+  D G Y
Sbjct: 322 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQA----VLEIPNVQLDDAGFY 377

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C   N  G+  S+   L V   P++  +           + +ECKA+G P P   W+ N
Sbjct: 378 ECRAENSRGK-NSFRGQLQVYTYPHWLEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKN 436

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE-- 220
           G P S   P  R ++    + I ++ +SD G Y C A N  G +Y    + +LA AP   
Sbjct: 437 GAPYS---PQSRVEMVNGVLMIHSVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFP 493

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
           +    K      G+ VV+ C+  G+PKP ++W    K +    R  IL  G L+I + + 
Sbjct: 494 LNHLKKTIIVTKGREVVIECKPQGSPKPIISWKKGDKAVRENKRIAILPDGSLRILNASK 553

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           +D G+Y C   N  G+A+   S++VKE T I   P+  E+  G+S    C A+ D SL +
Sbjct: 554 SDEGKYVCRGENIFGSAEIIASVSVKEPTKIELTPKRTELTVGESVVLSCKAIHDSSLDV 613

Query: 340 SIVWLRGSEPIDFES-----EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +  W    +PIDFE      E    Q++   L +     + +G+Y CR QT  D +  +A
Sbjct: 614 TFYWTLKGQPIDFEKDGGHFENIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEA 673

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKD 447
            L V+ P   P    +++ I    A +SW+P +          Y +Q        W    
Sbjct: 674 ELLVRGP-PGPPGVVIVEEITESTATLSWSPAADN--HSPISSYNLQARSPFSLGWQTVK 730

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGT 506
              ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T
Sbjct: 731 ---TVPEIITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSTPSRVIRTNEAVPKT 785

Query: 507 VQSLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISD 561
             +  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+
Sbjct: 786 APTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSE 840

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPN 616
            +    +   + P T + + +  Y   GDG  S+ +        P   P +V+  G + +
Sbjct: 841 ASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATGVSVS 900

Query: 617 NLVISWTAMPE 627
            ++++W  + E
Sbjct: 901 EILVAWKHVKE 911



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 157/649 (24%), Positives = 241/649 (37%), Gaps = 76/649 (11%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INAA 138
           L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + AA
Sbjct: 264 LYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAA 323

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P I W+  NG   S+A    R +     + I N++  D G Y C
Sbjct: 324 KGTTVKMECFALGNPVPTITWMKVNGYIPSKA----RLRKSQAVLEIPNVQLDDAGFYEC 379

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK 257
            A NS G       + V  + P   E   D     G  +   C+  G P+P   W+ N  
Sbjct: 380 RAENSRGKNSFRGQLQVYTY-PHWLEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNGA 438

Query: 258 ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH---ITDQP 314
             +      +  G L I  V  +D+G Y C A NK G    S  L +        +    
Sbjct: 439 PYSPQSRVEMVNGVLMIHSVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFPLNHLK 498

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           +   V  G+     C     P  K  I W +G + +      R     D SL +  +S+ 
Sbjct: 499 KTIIVTKGREVVIECKPQGSP--KPIISWKKGDKAV--RENKRIAILPDGSLRILNASKS 554

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR-- 432
           D G+Y CR +      E  A+++V+ P +        ++   +  V+S   +   SL   
Sbjct: 555 DEGKYVCRGENIFGSAEIIASVSVKEPTKIELTPKRTELTVGESVVLSCKAIHDSSLDVT 614

Query: 433 ----------------GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
                           GHF   + Q       +  IR +++         V     +  +
Sbjct: 615 FYWTLKGQPIDFEKDGGHFENIRAQA---SSADLMIRNILLMHAGRYGCRVQTTADSVSD 671

Query: 477 FARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMG 536
            A +L       GPP          G PG V   E   +  S   L W      +  +  
Sbjct: 672 EAELLV-----RGPP----------GPPGVVIVEE---ITESTATLSWSPAADNHSPISS 713

Query: 537 YKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES- 594
           Y ++ +S     +G   ++ +P I      SA    L P  +Y   +      G G  S 
Sbjct: 714 YNLQARS--PFSLGWQTVKTVPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPST 771

Query: 595 -----KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEA 649
                +    VP   P NV GR    + LVI+W  + E   N   F Y + +R + T   
Sbjct: 772 PSRVIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT-RG 830

Query: 650 WNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
           W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V
Sbjct: 831 WKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVV 877



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 107/444 (24%), Positives = 166/444 (37%), Gaps = 46/444 (10%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           KKV L C   G P+P   W ++G  I+  SD       G  +I    E  D G Y C  +
Sbjct: 127 KKVALNCEVRGNPIPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLAT 186

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N  G   S    L       F+      ++  E + V   C      PE    WV N  P
Sbjct: 187 NSFGSVLSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 246

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
            S    + RR +      + I  ++ SD G+Y C   N++                  V 
Sbjct: 247 -SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVM 305

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            +    +  H P    A K      G TV + C   G P P + W+     +        
Sbjct: 306 GEYEPKIEVHFPFTVTAAK------GTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK 359

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               L+I +V   D+G Y C A N  G     G L V  + H  ++  D ++++G    +
Sbjct: 360 SQAVLEIPNVQLDDAGFYECRAENSRGKNSFRGQLQVYTYPHWLEKLNDTQLDSGSPLRW 419

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  + +  WL+   P   +S    V      L +   ++ D+G Y C A+ + 
Sbjct: 420 ECKATGKP--RPTYRWLKNGAPYSPQSRVEMVNG---VLMIHSVNQSDAGMYQCLAENKY 474

Query: 388 DFIEAQATLTVQVPLEAPSNFTL------IQVIDAKKAVVSWNPV-SPQSLRGHFRGYKV 440
             I A A L +   L +   F L      I V   ++ V+   P  SP+ +    +G K 
Sbjct: 475 GAIYASAELKI---LASAPTFPLNHLKKTIIVTKGREVVIECKPQGSPKPIISWKKGDKA 531

Query: 441 QTWTEKDG---EGSIRELIVNKGE 461
               ++     +GS+R L  +K +
Sbjct: 532 VRENKRIAILPDGSLRILNASKSD 555



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 121/291 (41%), Gaps = 35/291 (12%)

Query: 119 DLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D SV   P F  EP+   F   ++E+ V   C+  G P P   W+ NG  I     + R 
Sbjct: 102 DESVDYGPVFVQEPDDIIFPTDSDEKKVALNCEVRGNPIPSYRWLRNGTEIDLES-DYRY 160

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            +      I N  ++ D+G+Y C ATNS G V         A+    +   +   +V +G
Sbjct: 161 SLIDGTFIISNPSEAKDSGHYQCLATNSFGSVLSREATLQFAYLGNFSGRTRSAVSVREG 220

Query: 234 KTVVLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGE 284
           + VVL C    +P P       +W+ N+          R+   ETG+L I+ V  +D G 
Sbjct: 221 QGVVLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGS 276

Query: 285 YTCFARNKLGTAQ---GSGSLTVKEHTHITDQPEDYEVE--------AGQSATFRCNAVS 333
           Y C  +N +  A+       LT++    + +     EV          G +    C A+ 
Sbjct: 277 YICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALG 336

Query: 334 DPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           +P    +I W++ +  I  ++  R  Q+    L +      D+G Y CRA+
Sbjct: 337 NPV--PTITWMKVNGYIPSKARLRKSQA---VLEIPNVQLDDAGFYECRAE 382



 Score = 46.6 bits (109), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 76/189 (40%), Gaps = 19/189 (10%)

Query: 17  LNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINP 76
           L ++A+  +   N H  K   VT+ +EV +        C   G+P P   W K    +  
Sbjct: 483 LKILASAPTFPLN-HLKKTIIVTKGREVVIE-------CKPQGSPKPIISWKKGDKAVRE 534

Query: 77  SDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFIN 136
           + RI+    G SL I +   SD+G Y C   N  G A+  +  +SV       + P+   
Sbjct: 535 NKRIAILPDG-SLRILNASKSDEGKYVCRGENIFGSAEIIA-SVSVKEPTKIELTPKRTE 592

Query: 137 AAEEETVTFECKA---SGLPEPEIHWVHNGKPISQAPP-----NPRRKVGPNRITIENLR 188
               E+V   CKA   S L +   +W   G+PI          N R +     + I N+ 
Sbjct: 593 LTVGESVVLSCKAIHDSSL-DVTFYWTLKGQPIDFEKDGGHFENIRAQASSADLMIRNIL 651

Query: 189 KSDTGNYGC 197
               G YGC
Sbjct: 652 LMHAGRYGC 660


>gi|395520400|ref|XP_003764321.1| PREDICTED: contactin-5 [Sarcophilus harrisii]
          Length = 1015

 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 166/611 (27%), Positives = 260/611 (42%), Gaps = 49/611 (8%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           A +   V++ C   G P+P   W K    +P     R SQG     L I +V+  D G Y
Sbjct: 227 AAKGMTVKMECFALGNPVPTISWMKVNGYIPSKARLRKSQG----VLEIPNVQLDDAGIY 282

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C   N  G   S+   L V   P++  +    +      + +ECKA+G P P   W+ N
Sbjct: 283 ECRAENSRGR-NSFRGQLQVYNYPHWVEKLNDTHLDSGSPLRWECKATGKPRPTYRWLKN 341

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--E 220
           G P+       R ++    + I N+ +SD G Y C A N  G +Y    + VLA AP   
Sbjct: 342 GVPLLA---QSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGSIYASAELKVLASAPVFA 398

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
           + +  K      G+ V++ C+  G+PKP ++W    K +    R  IL  G L+I + + 
Sbjct: 399 LNQLKKTIIITKGQEVLIECKPQGSPKPTISWKKGDKAVRESKRIAILPDGSLRILNASK 458

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
            D G+Y C   N  G+A+   S+ VKE T I   P+  E+  G+S    C A+ D SL +
Sbjct: 459 PDEGKYICRGENVFGSAEILASVFVKEPTRIELTPKKIELTVGESIVLNCKAIHDASLDV 518

Query: 340 SIVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           S  W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A
Sbjct: 519 SFYWTLKGQPIDFEKERGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEA 578

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKD 447
            L V+ P   P    +++ I    A +SW+P +          Y +Q        W    
Sbjct: 579 DLLVRGP-PGPPGIVIVEEITDSTATLSWSPAADN--HSPISSYNLQARSPFSLGWQTVK 635

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGT 506
              ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T
Sbjct: 636 ---TVPEIITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKT 690

Query: 507 VQSLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISD 561
             +  +   G      + W  V  E  NG   GY + ++    +G K     E++   SD
Sbjct: 691 APANVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSD 745

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPN 616
            +    +   + P T + + +  Y   GDG  S  +        P   P +V+    + +
Sbjct: 746 ASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSNIVVICSAEGEPSAAPTDVKATSLSVS 805

Query: 617 NLVISWTAMPE 627
            ++++W  + E
Sbjct: 806 EILVAWKHIKE 816



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 155/632 (24%), Positives = 233/632 (36%), Gaps = 74/632 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  V+ SD GSY C V N V  A+  S    +            P   V  P  + A
Sbjct: 168 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFMVTA 227

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I N++  D G Y 
Sbjct: 228 AKGMTVKMECFALGNPVPTISWMKVNG----YIPSKARLRKSQGVLEIPNVQLDDAGIYE 283

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V  + P   E   D +   G  +   C+  G P+P   W+ N 
Sbjct: 284 CRAENSRGRNSFRGQLQVYNY-PHWVEKLNDTHLDSGSPLRWECKATGKPRPTYRWLKNG 342

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITDQ 313
             L       +  G L I +V  +D+G Y C A NK G+   S  L V        +   
Sbjct: 343 VPLLAQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGSIYASAELKVLASAPVFALNQL 402

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +   +  GQ     C     P  K +I W +G + +      R     D SL +  +S+
Sbjct: 403 KKTIIITKGQEVLIECKPQGSP--KPTISWKKGDKAV--RESKRIAILPDGSLRILNASK 458

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL-- 431
            D G+Y CR +      E  A++ V+ P         I++   +  V++   +   SL  
Sbjct: 459 PDEGKYICRGENVFGSAEILASVFVKEPTRIELTPKKIELTVGESIVLNCKAIHDASLDV 518

Query: 432 ----------------RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
                           RGHF   + Q       +  IR +++         V     +  
Sbjct: 519 SFYWTLKGQPIDFEKERGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQTTADSVS 575

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
           + A +L       GPP          G PG V   E   +  S   L W      +  + 
Sbjct: 576 DEADLLV-----RGPP----------GPPGIVIVEE---ITDSTATLSWSPAADNHSPIS 617

Query: 536 GYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y ++ +S     +G   ++ +P I      SA    L P  +Y   +      G G  S
Sbjct: 618 SYNLQARS--PFSLGWQTVKTVPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPS 675

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P NV GR    + LVI+W  + E   N   F Y + +R + T  
Sbjct: 676 TPSRMIRTNEAVPKTAPANVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT-R 734

Query: 649 AWNQDDVLDWRQSELVLANQ--PTFQPYEIKV 678
            W +  V     S+ +  ++  P   P+E+KV
Sbjct: 735 GWKEKMVTSSDASKFIYRDESVPPLTPFEVKV 766



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 146/644 (22%), Positives = 247/644 (38%), Gaps = 92/644 (14%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+GVP+    R+   N    L+I +V  SD G Y C   N  G   
Sbjct: 326 CKATGKPRPTYRWLKNGVPLLAQSRVEMVN--GVLMIHNVNQSDAGMYQCLAENKYGSIY 383

Query: 115 SYSIDLSVLA-APYFTVE--PEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L VLA AP F +    + I   + + V  ECK  G P+P I W    K + ++  
Sbjct: 384 A-SAELKVLASAPVFALNQLKKTIIITKGQEVLIECKPQGSPKPTISWKKGDKAVRESK- 441

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP-EITEAPKDEY 229
             R  + P+  + I N  K D G Y C   N  G    ++  +V    P  I   PK   
Sbjct: 442 --RIAILPDGSLRILNASKPDEGKYICRGENVFGSA--EILASVFVKEPTRIELTPKKIE 497

Query: 230 TVDGKTVVLTCRVFGAPKPEVNWIHNQK------ELTGGRYTILE----TGDLKITDVAF 279
              G+++VL C+       +V++    K      E   G +  +     + DL I ++  
Sbjct: 498 LTVGESIVLNCKAIHDASLDVSFYWTLKGQPIDFEKERGHFESIRAQASSADLMIRNILL 557

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVK-----EHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +G Y C  +    +      L V+         I ++  D       +AT   +  +D
Sbjct: 558 MHAGRYGCRVQTTADSVSDEADLLVRGPPGPPGIVIVEEITD------STATLSWSPAAD 611

Query: 335 PSLKLSIVWLRGSEPIDF-----ESEPRFVQSN-------------DYSLTVTKSSELDS 376
               +S   L+   P        ++ P  +  +             +Y   V  ++ + +
Sbjct: 612 NHSPISSYNLQARSPFSLGWQTVKTVPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGT 671

Query: 377 GQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR 436
           G       T    I         VP  AP+N +  +     + V++W PVS +   G   
Sbjct: 672 GD----PSTPSRMIRTNEA----VPKTAPANVSG-RSGRRHELVIAWEPVSEEFQNGEGF 722

Query: 437 GYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF-ARVLAFNGAYNGPPSEII 495
           GY V  +      G   +++ +   S     D+ VP    F  +V  +N   +GP S I+
Sbjct: 723 GYIV-AFRPNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSNIV 781

Query: 496 SFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY-------QSVKGT 547
              + EG P    + ++A  L  S   + W   ++  G   G+++ Y       ++ +  
Sbjct: 782 VICSAEGEPSAAPTDVKATSLSVSEILVAWKHIKESLGRPQGFEVGYWKDMEQEEAAETV 841

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PF 602
           K G              +S  L GLE +T Y + +  Y  AG G  S  +        P 
Sbjct: 842 KTGG-----------NESSIILTGLEGNTLYHLTVRAYNGAGYGPPSSEVRAATKKSPPS 890

Query: 603 KNPDNV--EGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           + P N+  E +GS    + + W  +  + + +    Y++F+R+ 
Sbjct: 891 QAPSNIMWEQQGS---QVSLGWEPVRPLANESEVVGYKVFYRQE 931



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 151/394 (38%), Gaps = 39/394 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH-VEFSDQGSYTCEVS 107
           KKV L C   G P+P   W ++G  ++            +LII +  E  D G Y C  +
Sbjct: 32  KKVALNCEARGNPVPNYRWLRNGTELDLESDYRYSLIEGNLIINNPSEAKDAGHYQCLTA 91

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N +G   S    L       F+      ++  E + V   C      PE    WV N  P
Sbjct: 92  NSLGSILSREAILQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 151

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
            S    + RR +      + I  ++ SD G+Y C   N++                  V 
Sbjct: 152 -SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVM 210

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            +    +  H P +  A K      G TV + C   G P P ++W+     +        
Sbjct: 211 GEYEPKIEVHFPFMVTAAK------GMTVKMECFALGNPVPTISWMKVNGYIPSKARLRK 264

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
             G L+I +V   D+G Y C A N  G     G L V  + H  ++  D  +++G    +
Sbjct: 265 SQGVLEIPNVQLDDAGIYECRAENSRGRNSFRGQLQVYNYPHWVEKLNDTHLDSGSPLRW 324

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  + +  WL+   P+  +S    V      L +   ++ D+G Y C A+ + 
Sbjct: 325 ECKATGKP--RPTYRWLKNGVPLLAQSRVEMVNG---VLMIHNVNQSDAGMYQCLAENKY 379

Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
             I A A L V   L +   F L Q+   KK ++
Sbjct: 380 GSIYASAELKV---LASAPVFALNQL---KKTII 407



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 119/294 (40%), Gaps = 34/294 (11%)

Query: 115 SYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           S SI+ SV   P F  EP+   F   ++E+ V   C+A G P P   W+ NG  +     
Sbjct: 4   SVSIE-SVDYGPVFVQEPDDIIFPTDSDEKKVALNCEARGNPVPNYRWLRNGTELDLESD 62

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
                +  N I        D G+Y C   NSLG +     +   A+    +   +   +V
Sbjct: 63  YRYSLIEGNLIINNPSEAKDAGHYQCLTANSLGSILSREAILQFAYLGNFSGRTRSAVSV 122

Query: 232 -DGKTVVLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVAFAD 281
            +G+ VVL C    +P P       +W+ N+          R+   ETG+L I+ V  +D
Sbjct: 123 REGQGVVLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSD 178

Query: 282 SGEYTCFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATFRCN 330
            G Y C  +N +  A+       LT++    + +     EV          G +    C 
Sbjct: 179 VGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFMVTAAKGMTVKMECF 238

Query: 331 AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           A+ +P   +S + + G  P    S+ R  +S    L +      D+G Y CRA+
Sbjct: 239 ALGNPVPTISWMKVNGYIP----SKARLRKSQGV-LEIPNVQLDDAGIYECRAE 287



 Score = 43.1 bits (100), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 66/167 (39%), Gaps = 13/167 (7%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  + ++V + C   G+P P   W K    +  S RI+    G SL I +    D+
Sbjct: 403 KKTIIITKGQEVLIECKPQGSPKPTISWKKGDKAVRESKRIAILPDG-SLRILNASKPDE 461

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE--PEFINAAEEETVTFECKA--SGLPEP 155
           G Y C   N  G A+   I  SV       +E  P+ I     E++   CKA      + 
Sbjct: 462 GKYICRGENVFGSAE---ILASVFVKEPTRIELTPKKIELTVGESIVLNCKAIHDASLDV 518

Query: 156 EIHWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
             +W   G+PI          + R +     + I N+     G YGC
Sbjct: 519 SFYWTLKGQPIDFEKERGHFESIRAQASSADLMIRNILLMHAGRYGC 565


>gi|109108423|ref|XP_001094872.1| PREDICTED: contactin-5 isoform 3 [Macaca mulatta]
          Length = 1026

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 161/609 (26%), Positives = 261/609 (42%), Gaps = 45/609 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           A +   V++ C   G P+P   W K    I    R+ +      L I +V+  D G Y C
Sbjct: 238 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRKSQ--AVLEIPNVQLDDAGIYEC 295

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N  G+  S+   L V   P++  +           + +ECKA+G P P   W+ NG 
Sbjct: 296 RAENSRGK-NSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNGV 354

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--EIT 222
           P+S      R ++    + I N+ +SD G Y C A N  G +Y    + +LA AP   + 
Sbjct: 355 PLSS---QSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFALN 411

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           +  K       + VV+ C+  G+PKP ++W    + +    R  IL  G L+I + + +D
Sbjct: 412 QLKKTIIVTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSD 471

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+Y C   N  G+A+   SL+VKE T I   P+  E+  G+S    C A+ D SL ++ 
Sbjct: 472 EGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 531

Query: 342 VWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A L
Sbjct: 532 YWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAEL 591

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKDGE 449
            V+ P   P    +++ I    A +SW+P +          Y +Q        W      
Sbjct: 592 LVRGP-PGPPGIVIVEEITESTATLSWSPAADN--HSPISSYNLQARSPFSLGWQTVK-- 646

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQ 508
            ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T  
Sbjct: 647 -TVPEIITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAP 703

Query: 509 SLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISDPT 563
           +  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+ +
Sbjct: 704 TNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSEAS 758

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNL 618
               +   + P T + + +  Y   GDG  S+ +        P   P +V+    + + +
Sbjct: 759 KFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEI 818

Query: 619 VISWTAMPE 627
           +++W  + E
Sbjct: 819 LVAWKHIKE 827



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 160/650 (24%), Positives = 241/650 (37%), Gaps = 76/650 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + A
Sbjct: 179 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 238

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I N++  D G Y 
Sbjct: 239 AKGTTVKMECFALGNPVPTITWMKVNG----YIPSKSRLRKSQAVLEIPNVQLDDAGIYE 294

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V  + P   E   D     G  +   C+  G P+P   W+ N 
Sbjct: 295 CRAENSRGKNSFRGQLQVYTY-PHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG 353

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITDQ 313
             L+      +  G L I +V  +D+G Y C A NK G    S  L +        +   
Sbjct: 354 VPLSSQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQL 413

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +   V   Q     C     P  K +I W +G   +      R     D SL +  +S+
Sbjct: 414 KKTIIVTKDQEVVIECKPQGSP--KPTISWKKGDRAV--RENKRIAILPDGSLRILNASK 469

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI----------QVIDAKKAV 420
            D G+Y CR +      E  A+L+V+ P      P    L            + DA   V
Sbjct: 470 SDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 529

Query: 421 VSW-----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
             +      P+  +   GHF   + Q       +  IR +++         V     +  
Sbjct: 530 TFYWTLKGQPIDFEEEGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQTTADSVS 586

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
           + A +L       GPP          G PG V   E   +  S   L W      +  + 
Sbjct: 587 DEAELLV-----RGPP----------GPPGIVIVEE---ITESTATLSWSPAADNHSPIS 628

Query: 536 GYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y ++ +S     +G   ++ +P I      SA    L P  +Y   +      G G  S
Sbjct: 629 SYNLQARS--PFSLGWQTVKTVPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPS 686

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P NV GR    + LVI+W  + E   N   F Y + +R + T  
Sbjct: 687 TPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT-R 745

Query: 649 AWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
            W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V
Sbjct: 746 GWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVV 793



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 149/394 (37%), Gaps = 39/394 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           KKV L C   G P+P   W ++G  I+  SD       G  +I    E  D G Y C  +
Sbjct: 43  KKVALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLAT 102

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N +G   S    L       F+      ++  E + V   C      PE    WV N  P
Sbjct: 103 NTLGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 162

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
            S    + RR +      + I  ++ SD G+Y C   N++                  V 
Sbjct: 163 -SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVM 221

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            +    +  H P    A K      G TV + C   G P P + W+     +        
Sbjct: 222 GEYEPKIEVHFPFTVTAAK------GTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRK 275

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               L+I +V   D+G Y C A N  G     G L V  + H  ++  D ++++G    +
Sbjct: 276 SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRW 335

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  + +  WL+   P+  +S    V      L +   ++ D+G Y C A+ + 
Sbjct: 336 ECKATGKP--RPTYRWLKNGVPLSSQSRVEMVNG---VLMIHNVNQSDAGMYQCLAENKY 390

Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
             I A A L +   L +   F L Q+   KK ++
Sbjct: 391 GAIYASAELKI---LASAPTFALNQL---KKTII 418



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 121/289 (41%), Gaps = 35/289 (12%)

Query: 121 SVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
           SV   P F  EP+   F   ++E+ V   C+  G P P   W+ NG  I     + R  +
Sbjct: 20  SVDYGPVFVQEPDDIIFPTDSDEKKVALNCEVRGNPVPSYRWLRNGTEI-DLESDYRYSL 78

Query: 178 GPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKT 235
                 I N  ++ D+G+Y C ATN+LG +         A+    +   +   +V +G+ 
Sbjct: 79  IDGTFIISNPSEAKDSGHYQCLATNTLGSILSREATLQFAYLGNFSGRTRSAVSVREGQG 138

Query: 236 VVLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYT 286
           VVL C    +P P       +W+ N+          R+   ETG+L I+ V  +D G Y 
Sbjct: 139 VVLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYI 194

Query: 287 CFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATFRCNAVSDP 335
           C  +N +  A+       LT++    + +     EV          G +    C A+ +P
Sbjct: 195 CLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNP 254

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
               +I W++ +  I  +S  R  Q+    L +      D+G Y CRA+
Sbjct: 255 V--PTITWMKVNGYIPSKSRLRKSQA---VLEIPNVQLDDAGIYECRAE 298



 Score = 46.6 bits (109), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  ++++V + C   G+P P   W K    +  + RI+    G SL I +   SD+
Sbjct: 414 KKTIIVTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDG-SLRILNASKSDE 472

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI-- 157
           G Y C   N  G A+  +  LSV       + P+       E++   CKA      ++  
Sbjct: 473 GKYVCRGENVFGSAEIIA-SLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 531

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          + R +     + I N+     G YGC
Sbjct: 532 YWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGC 576


>gi|355763246|gb|EHH62135.1| hypothetical protein EGM_20344, partial [Macaca fascicularis]
          Length = 876

 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 161/609 (26%), Positives = 261/609 (42%), Gaps = 45/609 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           A +   V++ C   G P+P   W K    I    R+ +      L I +V+  D G Y C
Sbjct: 88  AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRKSQ--AVLEIPNVQLDDAGIYEC 145

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N  G+  S+   L V   P++  +           + +ECKA+G P P   W+ NG 
Sbjct: 146 RAENSRGK-NSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNGV 204

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--EIT 222
           P+S      R ++    + I N+ +SD G Y C A N  G +Y    + +LA AP   + 
Sbjct: 205 PLSS---QSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFALN 261

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           +  K       + VV+ C+  G+PKP ++W    + +    R  IL  G L+I + + +D
Sbjct: 262 QLEKTIIVTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSD 321

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+Y C   N  G+A+   SL+VKE T I   P+  E+  G+S    C A+ D SL ++ 
Sbjct: 322 EGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 381

Query: 342 VWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A L
Sbjct: 382 YWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAEL 441

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKDGE 449
            V+ P   P    +++ I    A +SW+P +          Y +Q        W      
Sbjct: 442 LVRGP-PGPPGIVIVEEITESTATLSWSPAADN--HSPISSYNLQARSPFSLGWQTVK-- 496

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQ 508
            ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T  
Sbjct: 497 -TVPEIITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAP 553

Query: 509 SLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISDPT 563
           +  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+ +
Sbjct: 554 TNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSEAS 608

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNL 618
               +   + P T + + +  Y   GDG  S+ +        P   P +V+    + + +
Sbjct: 609 KFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEI 668

Query: 619 VISWTAMPE 627
           +++W  + E
Sbjct: 669 LVAWKHIKE 677



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 163/650 (25%), Positives = 243/650 (37%), Gaps = 76/650 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + A
Sbjct: 29  NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 88

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I N++  D G Y 
Sbjct: 89  AKGTTVKMECFALGNPVPTITWMKVNG----YIPSKSRLRKSQAVLEIPNVQLDDAGIYE 144

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V  + P   E   D     G  +   C+  G P+P   W+ N 
Sbjct: 145 CRAENSRGKNSFRGQLQVYTY-PHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG 203

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTV--KEHTHITDQP 314
             L+      +  G L I +V  +D+G Y C A NK G    S  L +     T   +Q 
Sbjct: 204 VPLSSQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQL 263

Query: 315 ED-YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           E    V   Q     C     P  K +I W +G   +      R     D SL +  +S+
Sbjct: 264 EKTIIVTKDQEVVIECKPQGSP--KPTISWKKGDRAV--RENKRIAILPDGSLRILNASK 319

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI----------QVIDAKKAV 420
            D G+Y CR +      E  A+L+V+ P      P    L            + DA   V
Sbjct: 320 SDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 379

Query: 421 VSW-----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
             +      P+  +   GHF   + Q       +  IR +++         V     +  
Sbjct: 380 TFYWTLKGQPIDFEEEGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQTTADSVS 436

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
           + A +L       GPP          G PG V   E   +  S   L W      +  + 
Sbjct: 437 DEAELLV-----RGPP----------GPPGIVIVEE---ITESTATLSWSPAADNHSPIS 478

Query: 536 GYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y ++ +S     +G   ++ +P I      SA    L P  +Y   +      G G  S
Sbjct: 479 SYNLQARS--PFSLGWQTVKTVPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPS 536

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P NV GR    + LVI+W  + E   N   F Y + +R + T  
Sbjct: 537 TPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT-R 595

Query: 649 AWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
            W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V
Sbjct: 596 GWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVV 643



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 66/164 (40%), Gaps = 9/164 (5%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQG 100
           K  +  ++++V + C   G+P P   W K    +  + RI+    G SL I +   SD+G
Sbjct: 265 KTIIVTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDG-SLRILNASKSDEG 323

Query: 101 SYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEIH 158
            Y C   N  G A+  +  LSV       + P+       E++   CKA      +   +
Sbjct: 324 KYVCRGENVFGSAEIIA-SLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFY 382

Query: 159 WVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           W   G+PI          + R +     + I N+     G YGC
Sbjct: 383 WTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGC 426


>gi|327272946|ref|XP_003221245.1| PREDICTED: contactin-1-like [Anolis carolinensis]
          Length = 1030

 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 190/728 (26%), Positives = 303/728 (41%), Gaps = 100/728 (13%)

Query: 38  VTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           V  K   AL  + V L C   G P+P+  W+K   P+  S  IS    G  L I +++F 
Sbjct: 257 VKFKDIYALLGQNVTLECFALGNPVPEIRWNKYLEPMPTSAEISMS--GAVLRIYNIQFE 314

Query: 98  DQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKASGLPE 154
           D+G+Y CE  N  G+ K +S  + V A P +    E IN  E +      + C A+  P 
Sbjct: 315 DEGTYECEAENHRGKDK-HSAKVYVQAYPEWV---EHINDTERDLGSEFHWPCVAAAKPL 370

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
           P I W+ +G P  +             +   +L+  D+G Y C A N  G +Y +  + V
Sbjct: 371 PTIRWLKDGIPYWKG-----------DLRFSSLKNEDSGMYQCVAENIHGMIYSNAELKV 419

Query: 215 LAHAPEITEAP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGD 271
           +  AP     P  K+     G   ++ C+   AP+P++ W      L    R  I   G 
Sbjct: 420 IVLAPTFEYYPMKKEVLAARGGQAIIECKPRAAPRPKLTWSKGAYILKNTTRTRIWYDGS 479

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
           L+I +V  AD+G YTCF  N  G A  S +L     T I   P + +V  GQ+AT +C+A
Sbjct: 480 LEILNVTAADAGNYTCFVENFKGKANSSSTLVTTAPTRIDLAPTNIDVIVGQNATLQCHA 539

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQ-----SNDYSLTVTKSSELDSGQYTCRAQTE 386
           + DPSL L+ +WL    P+D + E  + +      N+  L V  +    +G+YTC AQT 
Sbjct: 540 LHDPSLDLTFIWLLNGYPVDVDKESDYYERSIMIKNNGELIVKYAQLRHAGRYTCVAQTI 599

Query: 387 LDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHFRGYK 439
           +D   A A L V+ P   P     ++ I     V++W       +P+S  +++   R + 
Sbjct: 600 VDNATASADLVVRGPPGPPGGLK-VEEIKNTSVVLTWSRGTDNHSPISNYTIQS--RTFL 656

Query: 440 VQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
            + W +   +  + E     G   + +V   +P  +   R++A N    G PS     + 
Sbjct: 657 SEYWKDMKTDPPLVE-----GNVESAKVIDLIPWMEYEFRIMATNILGTGEPSMPSPIIQ 711

Query: 500 PEGVPGTVQSLEAIPLGSS--AFYLKWV--KPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
            EG P  V   E    G S     + WV    E   G   GY + ++S    +   +   
Sbjct: 712 TEGSPPNVAPSEVGGGGGSNRELTITWVPLPREYHFGNNFGYVVAFKSFDQKEWKRVTVP 771

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEG 610
            P I        K   + PS++Y++ +  +   G+G  S           P + P NV  
Sbjct: 772 QPEIG---RYVHKDESMPPSSRYQVKVRAFNNKGEGPFSLTAIIHSAEDAPSERPRNVHV 828

Query: 611 RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT 670
           +  +    V+SW      EH        IF                      L +     
Sbjct: 829 KVRSSTEAVVSW------EH--------IF---------------------NLAVTG--- 850

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
              YEI+    W+ ++ E +   + V+   + +  ++   P ++ +  V AFN A  GP 
Sbjct: 851 ---YEIRY---WSHREKEDAANRVQVSN-LNFSARLENLKPDTQYYTDVKAFNTAGFGPA 903

Query: 731 SEIISFVT 738
           +  +SFVT
Sbjct: 904 TSPLSFVT 911



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 93/372 (25%), Positives = 145/372 (38%), Gaps = 41/372 (11%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY---GKSLIIKHVEFS-DQGSYTCE 105
           +V + C   G P P   W  +   I+   ++++ ++   G +L I + E S D+G Y C 
Sbjct: 70  RVTMNCRARGIPTPTYKWQHNNWDID--IKMAKEHHIMVGGNLEINNPEKSRDEGKYVCI 127

Query: 106 VSNGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI------H 158
             N  G  +S    L+     P+   E   +   E       C     P P         
Sbjct: 128 AYNVHGTIRSREATLNFGYLYPFTPEERHPVKVKEGVGAVLLCN----PPPHYPDDLSYR 183

Query: 159 WVHNGKPISQAPPNPRRKVGPNR--ITIENLRKSDTGNYGCNAT-NSLGYVYKDVYVNVL 215
           WV N  P      + RR V  +   + I  +  SD GNY C  T NS+       ++ ++
Sbjct: 184 WVLNDFP-EFITLDKRRYVSQSNGNLYIAKVEASDKGNYSCFVTSNSITKSVFSSFIPLI 242

Query: 216 AHA-------PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE 268
             A       P+I    KD Y + G+ V L C   G P PE+ W    + +       + 
Sbjct: 243 PQADRSKGYLPDIRVKFKDIYALLGQNVTLECFALGNPVPEIRWNKYLEPMPTSAEISMS 302

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
              L+I ++ F D G Y C A N  G  + S  + V+ +    +   D E + G    + 
Sbjct: 303 GAVLRIYNIQFEDEGTYECEAENHRGKDKHSAKVYVQAYPEWVEHINDTERDLGSEFHWP 362

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A + P    +I WL+   P  ++ + RF          +     DSG Y C A+    
Sbjct: 363 CVAAAKP--LPTIRWLKDGIPY-WKGDLRF----------SSLKNEDSGMYQCVAENIHG 409

Query: 389 FIEAQATLTVQV 400
            I + A L V V
Sbjct: 410 MIYSNAELKVIV 421



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 133/633 (21%), Positives = 225/633 (35%), Gaps = 84/633 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C+    PLP   W KDG+P    D          L    ++  D G Y C   N  G   
Sbjct: 363 CVAAAKPLPTIRWLKDGIPYWKGD----------LRFSSLKNEDSGMYQCVAENIHGMIY 412

Query: 115 SYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPN 172
           S +    ++ AP F   P  + + AA       ECK    P P++ W      +      
Sbjct: 413 SNAELKVIVLAPTFEYYPMKKEVLAARGGQAIIECKPRAAPRPKLTWSKGAYILKNT--T 470

Query: 173 PRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP-EITEAPKDEYTV 231
             R      + I N+  +D GNY C   N  G    +    ++  AP  I  AP +   +
Sbjct: 471 RTRIWYDGSLEILNVTAADAGNYTCFVENFKGKA--NSSSTLVTTAPTRIDLAPTNIDVI 528

Query: 232 DGKTVVLTCRVFGAPKPEVN--WIHN--------QKELTGGRYTILETGDLKITDVAFAD 281
            G+   L C     P  ++   W+ N        + +       I   G+L +       
Sbjct: 529 VGQNATLQCHALHDPSLDLTFIWLLNGYPVDVDKESDYYERSIMIKNNGELIVKYAQLRH 588

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC A+  +  A  S  L V+                G     +   + + S+ L+ 
Sbjct: 589 AGRYTCVAQTIVDNATASADLVVRG-------------PPGPPGGLKVEEIKNTSVVLT- 634

Query: 342 VWLRGSE---PI----------------DFESEPRFVQSNDYSLTVTKSSELDSGQYTCR 382
            W RG++   PI                D +++P  V+ N  S  V         ++   
Sbjct: 635 -WSRGTDNHSPISNYTIQSRTFLSEYWKDMKTDPPLVEGNVESAKVIDLIPWMEYEFRIM 693

Query: 383 AQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDA----KKAVVSWNPVSPQSLRGHFRGY 438
           A   L   E      +     +P N    +V       ++  ++W P+  +   G+  GY
Sbjct: 694 ATNILGTGEPSMPSPIIQTEGSPPNVAPSEVGGGGGSNRELTITWVPLPREYHFGNNFGY 753

Query: 439 KVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF-ARVLAFNGAYNGPPSEIISF 497
            V  +   D +   R  +           D+ +P S  +  +V AFN    GP S     
Sbjct: 754 -VVAFKSFDQKEWKRVTVPQPEIGRYVHKDESMPPSSRYQVKVRAFNNKGEGPFSLTAII 812

Query: 498 VTPEGVPGTV-QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERL 556
            + E  P    +++      S+   + W      N  + GY+I+Y S +  +      ++
Sbjct: 813 HSAEDAPSERPRNVHVKVRSSTEAVVSW--EHIFNLAVTGYEIRYWSHREKEDAANRVQV 870

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPD-------NVE 609
             ++     SA+L  L+P T+Y   +  +  AG G  +  L +V  K P        +VE
Sbjct: 871 SNLN----FSARLENLKPDTQYYTDVKAFNTAGFGPATSPLSFVTEKAPPRQRPRIVSVE 926

Query: 610 GRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
             GS     +I W  +    + +    Y++ +R
Sbjct: 927 RYGS---KFLIKWDHVKSQSNESSVKGYKVLYR 956



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 111/295 (37%), Gaps = 33/295 (11%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  TV PE    + E  VT  C+A G+P P   W HN   I          +    + I 
Sbjct: 57  PIDTVYPE---ESPEGRVTMNCRARGIPTPTYKWQHNNWDIDIKMAKEHHIMVGGNLEIN 113

Query: 186 NLRKS-DTGNYGCNATNSLGYVY-KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVF 243
           N  KS D G Y C A N  G +  ++  +N     P   E        +G   VL C   
Sbjct: 114 NPEKSRDEGKYVCIAYNVHGTIRSREATLNFGYLYPFTPEERHPVKVKEGVGAVLLCN-- 171

Query: 244 GAPKPE------VNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFA-RNK 292
             P P         W+ N       L   RY     G+L I  V  +D G Y+CF   N 
Sbjct: 172 --PPPHYPDDLSYRWVLNDFPEFITLDKRRYVSQSNGNLYIAKVEASDKGNYSCFVTSNS 229

Query: 293 LGTAQGSGSLTV-----KEHTHITD---QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWL 344
           +  +  S  + +     +   ++ D   + +D     GQ+ T  C A+ +P  +  I W 
Sbjct: 230 ITKSVFSSFIPLIPQADRSKGYLPDIRVKFKDIYALLGQNVTLECFALGNPVPE--IRWN 287

Query: 345 RGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           +  EP+   +E   +  +   L +      D G Y C A+      +  A + VQ
Sbjct: 288 KYLEPMPTSAE---ISMSGAVLRIYNIQFEDEGTYECEAENHRGKDKHSAKVYVQ 339



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 5/138 (3%)

Query: 32  APKQQYVTRKKEV-ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLI 90
           AP  +Y   KKEV A R  +  + C     P P+  WSK    +  + R ++  Y  SL 
Sbjct: 423 APTFEYYPMKKEVLAARGGQAIIECKPRAAPRPKLTWSKGAYILKNTTR-TRIWYDGSLE 481

Query: 91  IKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKAS 150
           I +V  +D G+YTC V N  G+A S S  L   A     + P  I+    +  T +C A 
Sbjct: 482 ILNVTAADAGNYTCFVENFKGKANSSST-LVTTAPTRIDLAPTNIDVIVGQNATLQCHAL 540

Query: 151 GLPEPEIH--WVHNGKPI 166
             P  ++   W+ NG P+
Sbjct: 541 HDPSLDLTFIWLLNGYPV 558


>gi|109108421|ref|XP_001094748.1| PREDICTED: contactin-5 isoform 2 [Macaca mulatta]
          Length = 1100

 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 161/609 (26%), Positives = 261/609 (42%), Gaps = 45/609 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           A +   V++ C   G P+P   W K    I    R+ +      L I +V+  D G Y C
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRKSQ--AVLEIPNVQLDDAGIYEC 369

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N  G+  S+   L V   P++  +           + +ECKA+G P P   W+ NG 
Sbjct: 370 RAENSRGK-NSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNGV 428

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--EIT 222
           P+S      R ++    + I N+ +SD G Y C A N  G +Y    + +LA AP   + 
Sbjct: 429 PLSS---QSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFALN 485

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           +  K       + VV+ C+  G+PKP ++W    + +    R  IL  G L+I + + +D
Sbjct: 486 QLKKTIIVTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSD 545

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+Y C   N  G+A+   SL+VKE T I   P+  E+  G+S    C A+ D SL ++ 
Sbjct: 546 EGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 605

Query: 342 VWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A L
Sbjct: 606 YWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAEL 665

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKDGE 449
            V+ P   P    +++ I    A +SW+P +          Y +Q        W      
Sbjct: 666 LVRGP-PGPPGIVIVEEITESTATLSWSPAADN--HSPISSYNLQARSPFSLGWQTVK-- 720

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQ 508
            ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T  
Sbjct: 721 -TVPEIITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAP 777

Query: 509 SLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISDPT 563
           +  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+ +
Sbjct: 778 TNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSEAS 832

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNL 618
               +   + P T + + +  Y   GDG  S+ +        P   P +V+    + + +
Sbjct: 833 KFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEI 892

Query: 619 VISWTAMPE 627
           +++W  + E
Sbjct: 893 LVAWKHIKE 901



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 160/650 (24%), Positives = 241/650 (37%), Gaps = 76/650 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + A
Sbjct: 253 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 312

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I N++  D G Y 
Sbjct: 313 AKGTTVKMECFALGNPVPTITWMKVNG----YIPSKSRLRKSQAVLEIPNVQLDDAGIYE 368

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V  + P   E   D     G  +   C+  G P+P   W+ N 
Sbjct: 369 CRAENSRGKNSFRGQLQVYTY-PHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG 427

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITDQ 313
             L+      +  G L I +V  +D+G Y C A NK G    S  L +        +   
Sbjct: 428 VPLSSQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQL 487

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +   V   Q     C     P  K +I W +G   +      R     D SL +  +S+
Sbjct: 488 KKTIIVTKDQEVVIECKPQGSP--KPTISWKKGDRAV--RENKRIAILPDGSLRILNASK 543

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI----------QVIDAKKAV 420
            D G+Y CR +      E  A+L+V+ P      P    L            + DA   V
Sbjct: 544 SDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 603

Query: 421 VSW-----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
             +      P+  +   GHF   + Q       +  IR +++         V     +  
Sbjct: 604 TFYWTLKGQPIDFEEEGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQTTADSVS 660

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
           + A +L       GPP          G PG V   E   +  S   L W      +  + 
Sbjct: 661 DEAELLV-----RGPP----------GPPGIVIVEE---ITESTATLSWSPAADNHSPIS 702

Query: 536 GYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y ++ +S     +G   ++ +P I      SA    L P  +Y   +      G G  S
Sbjct: 703 SYNLQARS--PFSLGWQTVKTVPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPS 760

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P NV GR    + LVI+W  + E   N   F Y + +R + T  
Sbjct: 761 TPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT-R 819

Query: 649 AWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
            W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V
Sbjct: 820 GWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVV 867



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 149/394 (37%), Gaps = 39/394 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           KKV L C   G P+P   W ++G  I+  SD       G  +I    E  D G Y C  +
Sbjct: 117 KKVALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLAT 176

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N +G   S    L       F+      ++  E + V   C      PE    WV N  P
Sbjct: 177 NTLGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 236

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
            S    + RR +      + I  ++ SD G+Y C   N++                  V 
Sbjct: 237 -SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVM 295

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            +    +  H P    A K      G TV + C   G P P + W+     +        
Sbjct: 296 GEYEPKIEVHFPFTVTAAK------GTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRK 349

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               L+I +V   D+G Y C A N  G     G L V  + H  ++  D ++++G    +
Sbjct: 350 SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRW 409

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  + +  WL+   P+  +S    V      L +   ++ D+G Y C A+ + 
Sbjct: 410 ECKATGKP--RPTYRWLKNGVPLSSQSRVEMVNG---VLMIHNVNQSDAGMYQCLAENKY 464

Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
             I A A L +   L +   F L Q+   KK ++
Sbjct: 465 GAIYASAELKI---LASAPTFALNQL---KKTII 492



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 125/297 (42%), Gaps = 35/297 (11%)

Query: 113 AKSYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
           + ++  D SV   P F  EP+   F   ++E+ V   C+  G P P   W+ NG  I   
Sbjct: 86  SDAFKQDESVDYGPVFVQEPDDIIFPTDSDEKKVALNCEVRGNPVPSYRWLRNGTEI-DL 144

Query: 170 PPNPRRKVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
             + R  +      I N  ++ D+G+Y C ATN+LG +         A+    +   +  
Sbjct: 145 ESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNTLGSILSREATLQFAYLGNFSGRTRSA 204

Query: 229 YTV-DGKTVVLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVA 278
            +V +G+ VVL C    +P P       +W+ N+          R+   ETG+L I+ V 
Sbjct: 205 VSVREGQGVVLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQ 260

Query: 279 FADSGEYTCFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATF 327
            +D G Y C  +N +  A+       LT++    + +     EV          G +   
Sbjct: 261 TSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKM 320

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
            C A+ +P    +I W++ +  I  +S  R  Q+    L +      D+G Y CRA+
Sbjct: 321 ECFALGNPV--PTITWMKVNGYIPSKSRLRKSQA---VLEIPNVQLDDAGIYECRAE 372



 Score = 46.2 bits (108), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  ++++V + C   G+P P   W K    +  + RI+    G SL I +   SD+
Sbjct: 488 KKTIIVTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDG-SLRILNASKSDE 546

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEI 157
           G Y C   N  G A+  +  LSV       + P+       E++   CKA      +   
Sbjct: 547 GKYVCRGENVFGSAEIIA-SLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 605

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          + R +     + I N+     G YGC
Sbjct: 606 YWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGC 650


>gi|355566984|gb|EHH23363.1| hypothetical protein EGK_06815, partial [Macaca mulatta]
          Length = 1084

 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 161/609 (26%), Positives = 261/609 (42%), Gaps = 45/609 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           A +   V++ C   G P+P   W K    I    R+ +      L I +V+  D G Y C
Sbjct: 296 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRKSQ--AVLEIPNVQLDDAGIYEC 353

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N  G+  S+   L V   P++  +           + +ECKA+G P P   W+ NG 
Sbjct: 354 RAENSRGK-NSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNGV 412

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--EIT 222
           P+S      R ++    + I N+ +SD G Y C A N  G +Y    + +LA AP   + 
Sbjct: 413 PLSS---QSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFALN 469

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           +  K       + VV+ C+  G+PKP ++W    + +    R  IL  G L+I + + +D
Sbjct: 470 QLKKTIIVTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSD 529

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+Y C   N  G+A+   SL+VKE T I   P+  E+  G+S    C A+ D SL ++ 
Sbjct: 530 EGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 589

Query: 342 VWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A L
Sbjct: 590 YWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAEL 649

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKDGE 449
            V+ P   P    +++ I    A +SW+P +          Y +Q        W      
Sbjct: 650 LVRGP-PGPPGIVIVEEITESTATLSWSPAADN--HSPISSYNLQARSPFSLGWQTVK-- 704

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQ 508
            ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T  
Sbjct: 705 -TVPEIITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAP 761

Query: 509 SLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISDPT 563
           +  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+ +
Sbjct: 762 TNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSEAS 816

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNL 618
               +   + P T + + +  Y   GDG  S+ +        P   P +V+    + + +
Sbjct: 817 KFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEI 876

Query: 619 VISWTAMPE 627
           +++W  + E
Sbjct: 877 LVAWKHIKE 885



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 160/650 (24%), Positives = 241/650 (37%), Gaps = 76/650 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + A
Sbjct: 237 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 296

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I N++  D G Y 
Sbjct: 297 AKGTTVKMECFALGNPVPTITWMKVNG----YIPSKSRLRKSQAVLEIPNVQLDDAGIYE 352

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V  + P   E   D     G  +   C+  G P+P   W+ N 
Sbjct: 353 CRAENSRGKNSFRGQLQVYTY-PHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG 411

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITDQ 313
             L+      +  G L I +V  +D+G Y C A NK G    S  L +        +   
Sbjct: 412 VPLSSQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQL 471

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +   V   Q     C     P  K +I W +G   +      R     D SL +  +S+
Sbjct: 472 KKTIIVTKDQEVVIECKPQGSP--KPTISWKKGDRAV--RENKRIAILPDGSLRILNASK 527

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI----------QVIDAKKAV 420
            D G+Y CR +      E  A+L+V+ P      P    L            + DA   V
Sbjct: 528 SDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 587

Query: 421 VSW-----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
             +      P+  +   GHF   + Q       +  IR +++         V     +  
Sbjct: 588 TFYWTLKGQPIDFEEEGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQTTADSVS 644

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
           + A +L       GPP          G PG V   E   +  S   L W      +  + 
Sbjct: 645 DEAELLV-----RGPP----------GPPGIVIVEE---ITESTATLSWSPAADNHSPIS 686

Query: 536 GYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y ++ +S     +G   ++ +P I      SA    L P  +Y   +      G G  S
Sbjct: 687 SYNLQARS--PFSLGWQTVKTVPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPS 744

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P NV GR    + LVI+W  + E   N   F Y + +R + T  
Sbjct: 745 TPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT-R 803

Query: 649 AWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
            W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V
Sbjct: 804 GWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVV 851



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 149/394 (37%), Gaps = 39/394 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           KKV L C   G P+P   W ++G  I+  SD       G  +I    E  D G Y C  +
Sbjct: 101 KKVALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLAT 160

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N +G   S    L       F+      ++  E + V   C      PE    WV N  P
Sbjct: 161 NTLGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 220

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
            S    + RR +      + I  ++ SD G+Y C   N++                  V 
Sbjct: 221 -SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVM 279

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            +    +  H P    A K      G TV + C   G P P + W+     +        
Sbjct: 280 GEYEPKIEVHFPFTVTAAK------GTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRK 333

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               L+I +V   D+G Y C A N  G     G L V  + H  ++  D ++++G    +
Sbjct: 334 SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRW 393

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  + +  WL+   P+  +S    V      L +   ++ D+G Y C A+ + 
Sbjct: 394 ECKATGKP--RPTYRWLKNGVPLSSQSRVEMVNG---VLMIHNVNQSDAGMYQCLAENKY 448

Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
             I A A L +   L +   F L Q+   KK ++
Sbjct: 449 GAIYASAELKI---LASAPTFALNQL---KKTII 476



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 125/297 (42%), Gaps = 35/297 (11%)

Query: 113 AKSYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
           + ++  D SV   P F  EP+   F   ++E+ V   C+  G P P   W+ NG  I   
Sbjct: 70  SDAFKQDESVDYGPVFVQEPDDIIFPTDSDEKKVALNCEVRGNPVPSYRWLRNGTEI-DL 128

Query: 170 PPNPRRKVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
             + R  +      I N  ++ D+G+Y C ATN+LG +         A+    +   +  
Sbjct: 129 ESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNTLGSILSREATLQFAYLGNFSGRTRSA 188

Query: 229 YTV-DGKTVVLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVA 278
            +V +G+ VVL C    +P P       +W+ N+          R+   ETG+L I+ V 
Sbjct: 189 VSVREGQGVVLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQ 244

Query: 279 FADSGEYTCFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATF 327
            +D G Y C  +N +  A+       LT++    + +     EV          G +   
Sbjct: 245 TSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKM 304

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
            C A+ +P    +I W++ +  I  +S  R  Q+    L +      D+G Y CRA+
Sbjct: 305 ECFALGNPV--PTITWMKVNGYIPSKSRLRKSQA---VLEIPNVQLDDAGIYECRAE 356



 Score = 46.2 bits (108), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  ++++V + C   G+P P   W K    +  + RI+    G SL I +   SD+
Sbjct: 472 KKTIIVTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDG-SLRILNASKSDE 530

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEI 157
           G Y C   N  G A+  +  LSV       + P+       E++   CKA      +   
Sbjct: 531 GKYVCRGENVFGSAEIIA-SLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 589

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          + R +     + I N+     G YGC
Sbjct: 590 YWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGC 634


>gi|296216730|ref|XP_002754694.1| PREDICTED: contactin-5 isoform 1 [Callithrix jacchus]
 gi|296216732|ref|XP_002754695.1| PREDICTED: contactin-5 isoform 2 [Callithrix jacchus]
          Length = 1100

 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 163/606 (26%), Positives = 259/606 (42%), Gaps = 49/606 (8%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           A +   V++ C   G P+P   W K    +P     R SQ      L I +V+  D G Y
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQA----VLEIPNVQLDDAGIY 367

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C   N  G+  S+   L V   P++  +           + +ECKA+G P P   W+ N
Sbjct: 368 ECRAENSRGK-NSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKN 426

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--E 220
           G P S   P  R ++    + I N+ +SD G Y C A N  G +Y    + +LA AP   
Sbjct: 427 GVPFS---PQSRVEMVNGLLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILAAAPTFA 483

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
           + +  K       + VV+ C   G+PKP ++W    + +    R  IL  G L+I + + 
Sbjct: 484 LNQLKKTIIVTKDQEVVIECTPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASK 543

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           +D G+Y C   N  G+A+    L+VKE T I   P+  E+  G+S    C A+ DPSL +
Sbjct: 544 SDEGKYVCRGENIFGSAEIIALLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDPSLDV 603

Query: 340 SIVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +  W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A
Sbjct: 604 TFYWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEA 663

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKD 447
            L V+ P   P    +++ I    A +SW+P +          Y +Q        W    
Sbjct: 664 ELLVRGP-PGPPGIVIVEEITESTATLSWSPAADN--HSPISSYNLQARSPFSLGWQTVK 720

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGT 506
              ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T
Sbjct: 721 ---TVPEIITGDMESAMA-VD-LNPWVEYEFRVVATNLIGTGDPSTPSRMIRTNEAVPKT 775

Query: 507 VQSLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISD 561
             +  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+
Sbjct: 776 APTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSE 830

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPN 616
            +    +   + P T + + +  Y   GDG  S+ +        P   P +V+    + +
Sbjct: 831 ASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVS 890

Query: 617 NLVISW 622
            ++++W
Sbjct: 891 EILVAW 896



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 158/650 (24%), Positives = 240/650 (36%), Gaps = 76/650 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + A
Sbjct: 253 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 312

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I N++  D G Y 
Sbjct: 313 AKGTTVKMECFALGNPVPTITWMKVNG----YIPSKARLRKSQAVLEIPNVQLDDAGIYE 368

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V  + P   E   D     G  +   C+  G P+P   W+ N 
Sbjct: 369 CRAENSRGKNSFRGQLQVYTY-PHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG 427

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITDQ 313
              +      +  G L I +V  +D+G Y C A NK G    S  L +        +   
Sbjct: 428 VPFSPQSRVEMVNGLLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILAAAPTFALNQL 487

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +   V   Q     C     P  K +I W +G   +      R     D SL +  +S+
Sbjct: 488 KKTIIVTKDQEVVIECTPQGSP--KPTISWKKGDRAV--RENKRIAILPDGSLRILNASK 543

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI---QVIDAKKAV------- 420
            D G+Y CR +      E  A L+V+ P      P    L     ++   KA+       
Sbjct: 544 SDEGKYVCRGENIFGSAEIIALLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDPSLDV 603

Query: 421 -----VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
                +   P+  +   GHF   + Q       +  IR +++         V     +  
Sbjct: 604 TFYWTLKGQPIDFEEEGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQTTADSVS 660

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
           + A +L       GPP          G PG V   E   +  S   L W      +  + 
Sbjct: 661 DEAELLV-----RGPP----------GPPGIVIVEE---ITESTATLSWSPAADNHSPIS 702

Query: 536 GYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y ++ +S     +G   ++ +P I      SA    L P  +Y   +      G G  S
Sbjct: 703 SYNLQARS--PFSLGWQTVKTVPEIITGDMESAMAVDLNPWVEYEFRVVATNLIGTGDPS 760

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P NV GR    + LVI+W  + E   N   F Y + +R + T  
Sbjct: 761 TPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT-R 819

Query: 649 AWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
            W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V
Sbjct: 820 GWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVV 867



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 149/394 (37%), Gaps = 39/394 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           KKV L C   G P+P   W ++G  I+  SD       G  +I    E  D G Y C  +
Sbjct: 117 KKVALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLAT 176

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N +G   S    L       F+      ++  E + V   C      PE    WV N  P
Sbjct: 177 NTLGSILSKEATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 236

Query: 166 ISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGY----------------VY 207
            S    + RR +  +   + I  ++ SD G+Y C   N++                  V 
Sbjct: 237 -SFVAEDSRRFISQDTGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVM 295

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            +    +  H P    A K      G TV + C   G P P + W+     +        
Sbjct: 296 GEYEPKIEVHFPFTVTAAK------GTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK 349

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               L+I +V   D+G Y C A N  G     G L V  + H  ++  D ++++G    +
Sbjct: 350 SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRW 409

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  + +  WL+   P   +S    V      L +   ++ D+G Y C A+ + 
Sbjct: 410 ECKATGKP--RPTYRWLKNGVPFSPQSRVEMVNG---LLMIHNVNQSDAGMYQCLAENKY 464

Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
             I A A L +   L A   F L Q+   KK ++
Sbjct: 465 GAIYASAELKI---LAAAPTFALNQL---KKTII 492



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 122/291 (41%), Gaps = 35/291 (12%)

Query: 119 DLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D SV   P F  EP+   F   ++E+ V   C+  G P P   W+ NG  I     + R 
Sbjct: 92  DESVDYGPVFVQEPDDIIFPTDSDEKKVALNCEVRGNPVPSYRWLRNGTEI-DLESDYRY 150

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            +      I N  ++ D+G+Y C ATN+LG +         A+    +   +   +V +G
Sbjct: 151 SLIDGTFIISNPSEAKDSGHYQCLATNTLGSILSKEATLQFAYLGNFSGRTRSAVSVREG 210

Query: 234 KTVVLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGE 284
           + VVL C    +P P       +W+ N+          R+   +TG+L I+ V  +D G 
Sbjct: 211 QGVVLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQDTGNLYISKVQTSDVGS 266

Query: 285 YTCFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATFRCNAVS 333
           Y C  +N +  A+       LT++    + +     EV          G +    C A+ 
Sbjct: 267 YICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALG 326

Query: 334 DPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           +P    +I W++ +  I  ++  R  Q+    L +      D+G Y CRA+
Sbjct: 327 NPV--PTITWMKVNGYIPSKARLRKSQA---VLEIPNVQLDDAGIYECRAE 372



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  ++++V + C   G+P P   W K    +  + RI+    G SL I +   SD+
Sbjct: 488 KKTIIVTKDQEVVIECTPQGSPKPTISWKKGDRAVRENKRIAILPDG-SLRILNASKSDE 546

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI-- 157
           G Y C   N  G A+  ++ LSV       + P+       E++   CKA   P  ++  
Sbjct: 547 GKYVCRGENIFGSAEIIAL-LSVKEPTRIELTPKRTELTVGESIVLNCKAIHDPSLDVTF 605

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          + R +     + I N+     G YGC
Sbjct: 606 YWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGC 650


>gi|432866112|ref|XP_004070704.1| PREDICTED: contactin-4-like [Oryzias latipes]
          Length = 1029

 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 164/628 (26%), Positives = 274/628 (43%), Gaps = 49/628 (7%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P+  W + D  P     ++++  +G  L I + +  + G Y C   N 
Sbjct: 248 VKLECFALGNPVPKISWRRLDDAPFGRKVKVNEA-FG-VLEIPYFQQENAGIYECLAENS 305

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G   S    L+  A+P   V+P+ +    ++TV +ECKASG P+P   W+ NG+  S  
Sbjct: 306 RGR-NSVRGKLTFYASPQLIVKPQDVQKTIDDTVVWECKASGKPKPSYRWLKNGE--SLD 362

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
           P   R +V    +TI +L   D G Y C A N  G ++ +  + VLA AP+ ++      
Sbjct: 363 PMEDRIEVNDGVLTIRSLNLVDVGMYQCVAENKYGRIFCNAQLRVLAIAPDFSQNLVKAQ 422

Query: 230 TV--DGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSGEYT 286
           T+   G  V++ C+   +P+  ++W   ++ +    R T+L+ G L++++V  AD+G YT
Sbjct: 423 TLARQGGDVLMECKPRMSPRGVISWRKGEEAIRESHRVTVLDNGSLRLSNVTKADAGVYT 482

Query: 287 CFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           C ARN+ G A  +GSL+VK+ T IT      +V  G+S    C    DP+L L   W   
Sbjct: 483 CVARNQFGVASSAGSLSVKDATVITSPAGHLDVTLGESIVLPCQVSHDPTLDLKFTWFFN 542

Query: 347 SEPIDFESEPRFVQS----NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPL 402
            + I F     + +     +D  + +       +G+YTC  QT++D I     + V+ P 
Sbjct: 543 EQLIHFGGRGAYFEKAGGRSDGGIMIRNIQLKHAGKYTCAVQTKVDSISIATDVVVRGPP 602

Query: 403 EAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSIRELIVN 458
             P +  +I++ +   A +SW P +          Y +Q  T          ++ EL   
Sbjct: 603 GPPLDCQVIEMTET-TATLSWRPGTDN--HSPILSYTIQARTPFSLGWQAVTTVPEL--P 657

Query: 459 KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTPEGVPGTVQS 509
           KG+  +  V +  P  +   RVLA N    G PS         E    VTP  V G    
Sbjct: 658 KGKKLSASVFELSPWVEYEFRVLATNSIGTGEPSKPSKKARTKETSPRVTPARVNGGGG- 716

Query: 510 LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSA 567
                 G S   + W  V  E  +G   GY + ++ +        ++      D +    
Sbjct: 717 ------GRSELVITWEPVPEELQSGPGFGYVVAFRPLGAPG---WMQAAVTSPDASKYVF 767

Query: 568 KLAGLEPSTKYRIHLAGYTKAGDGAESKY-LFYV----PFKNPDNVEGRGSTPNNLVISW 622
           K   + P + Y++ +  Y   G+G  S   + Y     P + P  +  R  +   + +SW
Sbjct: 768 KNESIPPFSPYQVKVGVYNNKGEGPFSPVTILYSAEEEPTRAPTRLRARSISAAEIDVSW 827

Query: 623 TAMPEIEHNAPHFKYRI-FWRRHNTGEA 649
             +P   +      Y + +WR     +A
Sbjct: 828 KPLPWSNNRRRILGYELWYWREKQKQDA 855



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 176/709 (24%), Positives = 261/709 (36%), Gaps = 81/709 (11%)

Query: 18  NVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT-------IWSKD 70
           N   T +S   N H    +    ++   +R ++ +   +  G P P +       I++ D
Sbjct: 107 NSFGTIVSREANLHVAYLENFKTQRRSPVRVREGQGVVLLCGPP-PHSGELTFRWIFNDD 165

Query: 71  GVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLS-VLAA---- 125
              I    R+       +L I  VE SD G+YTC V+N V ++         VL A    
Sbjct: 166 PSSIVQDTRLFVSQKTGNLYIAKVEPSDVGNYTCVVTNTVTKSSVRGPPTPLVLRADGVM 225

Query: 126 ----PYFTVE-PEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN 180
               P   V+ PE I+ A   TV  EC A G P P+I W    + +  AP    RKV  N
Sbjct: 226 GEYEPKIEVQFPEVIHVANSSTVKLECFALGNPVPKISW----RRLDDAPFG--RKVKVN 279

Query: 181 R----ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTV 236
                + I   ++ + G Y C A NS G       +   A +P++   P+D       TV
Sbjct: 280 EAFGVLEIPYFQQENAGIYECLAENSRGRNSVRGKLTFYA-SPQLIVKPQDVQKTIDDTV 338

Query: 237 VLTCRVFGAPKPEVNWIHNQKELTGGRYTI-LETGDLKITDVAFADSGEYTCFARNKLGT 295
           V  C+  G PKP   W+ N + L      I +  G L I  +   D G Y C A NK G 
Sbjct: 339 VWECKASGKPKPSYRWLKNGESLDPMEDRIEVNDGVLTIRSLNLVDVGMYQCVAENKYGR 398

Query: 296 AQGSGSLTVKEHTHITDQ---PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDF 352
              +  L V        Q           G      C     P  +  I W +G E I  
Sbjct: 399 IFCNAQLRVLAIAPDFSQNLVKAQTLARQGGDVLMECKPRMSP--RGVISWRKGEEAIR- 455

Query: 353 ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ 412
           ES  R    ++ SL ++  ++ D+G YTC A+ +     +  +L+V+      S    + 
Sbjct: 456 ESH-RVTVLDNGSLRLSNVTKADAGVYTCVARNQFGVASSAGSLSVKDATVITSPAGHLD 514

Query: 413 VIDAKKAV----VSWNPVSPQSLRG-------HFRG---YKVQTWTEKDGEGSIRELIVN 458
           V   +  V    VS +P               HF G   Y  +     DG   IR + + 
Sbjct: 515 VTLGESIVLPCQVSHDPTLDLKFTWFFNEQLIHFGGRGAYFEKAGGRSDGGIMIRNIQLK 574

Query: 459 KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSS 518
                T  V   V +                    I + V   G PG     + I +  +
Sbjct: 575 HAGKYTCAVQTKVDS------------------ISIATDVVVRGPPGPPLDCQVIEMTET 616

Query: 519 AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTK 577
              L W      +  ++ Y I  Q+     +G   +  +P +      SA +  L P  +
Sbjct: 617 TATLSWRPGTDNHSPILSYTI--QARTPFSLGWQAVTTVPELPKGKKLSASVFELSPWVE 674

Query: 578 YRIHLAGYTKAGDGAESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHN 631
           Y   +      G G  SK           P   P  V G G   + LVI+W  +PE   +
Sbjct: 675 YEFRVLATNSIGTGEPSKPSKKARTKETSPRVTPARVNGGGGGRSELVITWEPVPEELQS 734

Query: 632 APHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQ--PTFQPYEIKV 678
            P F Y + +R       W Q  V     S+ V  N+  P F PY++KV
Sbjct: 735 GPGFGYVVAFRPLG-APGWMQAAVTSPDASKYVFKNESIPPFSPYQVKV 782



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 148/373 (39%), Gaps = 35/373 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPI--NPSDRISQGNYGKSLIIKHV-EFSDQGSYTCE 105
           K+V   C   G P P   W  +   I  NP  R S    G +L I+H+ +  D G Y C 
Sbjct: 47  KEVVFSCEAQGQPAPFYRWKLNDSYIHPNPGSRFSL--MGGNLHIRHLNKEEDTGVYQCL 104

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLP----EPEIHWV 160
            SN  G   S   +L V     F  +    +   E + V   C   G P    E    W+
Sbjct: 105 ASNSFGTIVSREANLHVAYLENFKTQRRSPVRVREGQGVVLLC---GPPPHSGELTFRWI 161

Query: 161 HNGKPISQAPPNP---RRKVGPNRITIENLRKSDTGNYGCNATNSLG----------YVY 207
            N  P S          +K G   + I  +  SD GNY C  TN++            V 
Sbjct: 162 FNDDPSSIVQDTRLFVSQKTG--NLYIAKVEPSDVGNYTCVVTNTVTKSSVRGPPTPLVL 219

Query: 208 KDVYVNVLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
           +   V +  + P+I  + P+  +  +  TV L C   G P P+++W        G +  +
Sbjct: 220 RADGV-MGEYEPKIEVQFPEVIHVANSSTVKLECFALGNPVPKISWRRLDDAPFGRKVKV 278

Query: 267 LET-GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
            E  G L+I      ++G Y C A N  G     G LT      +  +P+D +     + 
Sbjct: 279 NEAFGVLEIPYFQQENAGIYECLAENSRGRNSVRGKLTFYASPQLIVKPQDVQKTIDDTV 338

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P  K S  WL+  E +D   E R ++ ND  LT+   + +D G Y C A+ 
Sbjct: 339 VWECKASGKP--KPSYRWLKNGESLD-PMEDR-IEVNDGVLTIRSLNLVDVGMYQCVAEN 394

Query: 386 ELDFIEAQATLTV 398
           +   I   A L V
Sbjct: 395 KYGRIFCNAQLRV 407



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 116/294 (39%), Gaps = 44/294 (14%)

Query: 122 VLAAPYFTVEPEFI-----NAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRK 176
           +L  P FT +P  +          + V F C+A G P P   W  N   I   P +    
Sbjct: 23  ILLRPIFTKQPGSVVFPIQPGESRKEVVFSCEAQGQPAPFYRWKLNDSYIHPNPGSRFSL 82

Query: 177 VGPNRITIENLRK-SDTGNYGCNATNSLGYVYK---DVYVNVLAHAPEITEAPKDEYTVD 232
           +G N + I +L K  DTG Y C A+NS G +     +++V  L +      +P      +
Sbjct: 83  MGGN-LHIRHLNKEEDTGVYQCLASNSFGTIVSREANLHVAYLENFKTQRRSPVR--VRE 139

Query: 233 GKTVVLTCRVFGAPKPE-----VNWIHNQKELTGGRYTIL----ETGDLKITDVAFADSG 283
           G+ VVL C     P P        WI N    +  + T L    +TG+L I  V  +D G
Sbjct: 140 GQGVVLLC----GPPPHSGELTFRWIFNDDPSSIVQDTRLFVSQKTGNLYIAKVEPSDVG 195

Query: 284 EYTCFARNKLGTA-----------QGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV 332
            YTC   N +  +           +  G +   E       PE   V    +    C A+
Sbjct: 196 NYTCVVTNTVTKSSVRGPPTPLVLRADGVMGEYEPKIEVQFPEVIHVANSSTVKLECFAL 255

Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDY--SLTVTKSSELDSGQYTCRAQ 384
            +P  K+S  W R    +D     R V+ N+    L +    + ++G Y C A+
Sbjct: 256 GNPVPKIS--WRR----LDDAPFGRKVKVNEAFGVLEIPYFQQENAGIYECLAE 303



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 84/199 (42%), Gaps = 13/199 (6%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P  AP+     + I A +  VSW P+   + R    GY++  W EK  + +   +I   G
Sbjct: 806 PTRAPTRLR-ARSISAAEIDVSWKPLPWSNNRRRILGYELWYWREKQKQDAA-TVIRTVG 863

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
             T+  +     +S  +  + A+N A  GP S I++  T +  P            +S  
Sbjct: 864 NKTSVVIRDLEGSSTYYISLRAYNSAGVGPQSSIVNVTTKKPPPSQAPVKIRWNTSNSKV 923

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            L+W  V   +    + GYK+ Y   K ++        P + +   T+ +L+ L  +  Y
Sbjct: 924 ILRWDQVHALENESEVTGYKVLYSQDKHSR--------PSVVETKNTTLELS-LPVNEDY 974

Query: 579 RIHLAGYTKAGDGAESKYL 597
            I +  +++ G+G  S  +
Sbjct: 975 VIQIKPFSEGGEGISSHQI 993


>gi|440911548|gb|ELR61203.1| Contactin-5, partial [Bos grunniens mutus]
          Length = 1007

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 159/610 (26%), Positives = 264/610 (43%), Gaps = 47/610 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           A +   V++ C   G P+P   W K    I    R+ +      L I +V+  D G Y C
Sbjct: 220 AAKGTTVKMECFALGNPVPTITWMKINGYIPSKSRLRKSQ--AVLEIPNVQLDDAGIYEC 277

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N  G+  S+   L V   P++  +           + +ECKA+G P P   W+ NG 
Sbjct: 278 RAENSRGK-NSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNGL 336

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--EIT 222
           P+       R ++    + I N+ +SD G Y C A N  G +Y    + +LA AP   + 
Sbjct: 337 PLLL---QSRIEMVNGVLMIHNVNQSDAGMYQCLAENKYGTIYASAELKILASAPTFALN 393

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           +  K       + V++ C+  G+PKP ++W    K +    R  IL  G L+I + + +D
Sbjct: 394 QLKKTIIIPKDQEVIIECKPQGSPKPTISWKKGDKAVRENKRIAILPDGSLRILNASKSD 453

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+Y C   N  G+A+ + +++VKE T I   P+  E+  G+S    C A+ DPSL ++ 
Sbjct: 454 EGKYICRGENVFGSAEITATVSVKEPTRIELTPKRTELTVGESIVLNCKAIHDPSLDVTF 513

Query: 342 VWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A L
Sbjct: 514 YWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAEL 573

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKDGE 449
            V+ P   P    +++ I    A +SW+P +          Y +Q        W      
Sbjct: 574 LVRGP-PGPPGIVIVEEITESTATLSWSPAADN--HSPISSYNLQARSPFSLGWQTVK-- 628

Query: 450 GSIRELIVNKGEST-TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTV 507
            ++ E+I    ES    E++ +V   +   RV+A N    G PS     + T E VP T 
Sbjct: 629 -TVPEIITGDMESAMAVELNPWV---EYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTA 684

Query: 508 QSLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISDP 562
            +  +   G      + W  V  E  NG   GY + ++    +G K     E++   SD 
Sbjct: 685 PTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSDA 739

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNN 617
           +    +   + P T + + +  Y   GDG  S+ +        P   P +V+    + + 
Sbjct: 740 SKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPTAAPTDVKATSVSVSE 799

Query: 618 LVISWTAMPE 627
           ++++W  + E
Sbjct: 800 ILVAWKHIKE 809



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 168/670 (25%), Positives = 252/670 (37%), Gaps = 91/670 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + A
Sbjct: 161 NLYISKVQASDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 220

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I N++  D G Y 
Sbjct: 221 AKGTTVKMECFALGNPVPTITWMKING----YIPSKSRLRKSQAVLEIPNVQLDDAGIYE 276

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V  + P   E   D     G  +   C+  G P+P   W+ N 
Sbjct: 277 CRAENSRGKNSFRGQLQVYTY-PHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG 335

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTV--KEHTHITDQ- 313
             L       +  G L I +V  +D+G Y C A NK GT   S  L +     T   +Q 
Sbjct: 336 LPLLLQSRIEMVNGVLMIHNVNQSDAGMYQCLAENKYGTIYASAELKILASAPTFALNQL 395

Query: 314 ------PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
                 P+D EV         C     P  K +I W +G + +      R     D SL 
Sbjct: 396 KKTIIIPKDQEV------IIECKPQGSP--KPTISWKKGDKAV--RENKRIAILPDGSLR 445

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI---QVIDAKKAV- 420
           +  +S+ D G+Y CR +      E  AT++V+ P      P    L     ++   KA+ 
Sbjct: 446 ILNASKSDEGKYICRGENVFGSAEITATVSVKEPTRIELTPKRTELTVGESIVLNCKAIH 505

Query: 421 -----------VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDK 469
                      +   P+  +   GHF   + Q       +  IR +++         V  
Sbjct: 506 DPSLDVTFYWTLKGQPIDFEKEGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQT 562

Query: 470 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQ 529
              +  + A +L       GPP          G PG V   E   +  S   L W     
Sbjct: 563 TADSVSDEAELLV-----RGPP----------GPPGIVIVEE---ITESTATLSWSPAAD 604

Query: 530 PNGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
            +  +  Y ++ +S     +G   ++ +P I      SA    L P  +Y   +      
Sbjct: 605 NHSPISSYNLQARS--PFSLGWQTVKTVPEIITGDMESAMAVELNPWVEYEFRVVATNPI 662

Query: 589 GDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G G  S      +    VP   P NV GR    + LVI+W  + E   N   F Y + +R
Sbjct: 663 GTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFR 722

Query: 643 RHNTGEAWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV---N 697
            + T   W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V    
Sbjct: 723 PNGT-RGWKEKMVTSSDASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVVICSA 779

Query: 698 KGESTTTEVD 707
           +GE T    D
Sbjct: 780 EGEPTAAPTD 789



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 151/635 (23%), Positives = 248/635 (39%), Gaps = 74/635 (11%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G+P+    RI   N    L+I +V  SD G Y C   N  G   
Sbjct: 319 CKATGKPRPTYRWLKNGLPLLLQSRIEMVN--GVLMIHNVNQSDAGMYQCLAENKYGTIY 376

Query: 115 SYSIDLSVLA-APYFTVE--PEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L +LA AP F +    + I   +++ V  ECK  G P+P I W    K + +   
Sbjct: 377 A-SAELKILASAPTFALNQLKKTIIIPKDQEVIIECKPQGSPKPTISWKKGDKAVRE--- 432

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
           N R  + P+  + I N  KSD G Y C   N  G       V+V      I   PK    
Sbjct: 433 NKRIAILPDGSLRILNASKSDEGKYICRGENVFGSAEITATVSV-KEPTRIELTPKRTEL 491

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQK------ELTGGRYTILE----TGDLKITDVAFA 280
             G+++VL C+    P  +V +    K      E  GG +  +     + DL I ++   
Sbjct: 492 TVGESIVLNCKAIHDPSLDVTFYWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILLM 551

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE--AGQSATFRCNAVSDPSLK 338
            +G Y C  +    +      L V+        P    VE     +AT   +  +D    
Sbjct: 552 HAGRYGCRVQTTADSVSDEAELLVRGPP---GPPGIVIVEEITESTATLSWSPAADNHSP 608

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD-FIEAQATLT 397
           +S   L+   P     +           TV    E+ +G        EL+ ++E +  + 
Sbjct: 609 ISSYNLQARSPFSLGWQ-----------TVKTVPEIITGDMESAMAVELNPWVEYEFRVV 657

Query: 398 VQVPLEAPSNFTLIQVIDAKKAV-------------------VSWNPVSPQSLRGHFRGY 438
              P+      T  ++I   +AV                   ++W PVS +   G   GY
Sbjct: 658 ATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGY 717

Query: 439 KVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF-ARVLAFNGAYNGPPSEIISF 497
            V  +      G   +++ +   S     D+ VP    F  +V  +N   +GP S+I+  
Sbjct: 718 IV-AFRPNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVI 776

Query: 498 VTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERL 556
            + EG P    + ++A  +  S   + W   ++  G   G++I Y+  K  +     E +
Sbjct: 777 CSAEGEPTAAPTDVKATSVSVSEILVAWKHIKESLGRPQGFEIGYR--KDMEQEDAAETV 834

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNV--E 609
              +    +S  L GLE +T Y   +  Y  AG G  S  +        P + P+N+  E
Sbjct: 835 K--TRGNESSIILTGLEGNTLYHFTVRAYNGAGYGPPSSEVSAATKKSPPSQAPNNLRWE 892

Query: 610 GRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
            +GS    L + W  +  + + +    Y++F+R+ 
Sbjct: 893 QQGS---QLSLGWDPVRPLANESEVMGYKVFYRQE 924



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 148/394 (37%), Gaps = 39/394 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           KKV L C   G P+P   W ++G  I+  SD       G  +I    E  D G Y C  +
Sbjct: 25  KKVALNCEARGNPIPNYRWLRNGTEIDLESDYRYSLIDGAFIISNPSEAKDSGHYQCLAA 84

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI--HWVHNGKP 165
           N  G   S  + L     P  T       ++ +         SG    EI   WV N  P
Sbjct: 85  NTFGSILSREVILQFACFPGGTSGKAPATSSGDVRDAGLVPGSGRSSGEIIYSWVFNEFP 144

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
            S    + RR +      + I  ++ SD G+Y C   N++                  V 
Sbjct: 145 -SFVAEDSRRFISQETGNLYISKVQASDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVM 203

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            +    +  H P    A K      G TV + C   G P P + W+     +        
Sbjct: 204 GEYEPKIEVHFPFTVTAAK------GTTVKMECFALGNPVPTITWMKINGYIPSKSRLRK 257

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               L+I +V   D+G Y C A N  G     G L V  + H  ++  D ++++G    +
Sbjct: 258 SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRW 317

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  + +  WL+   P+  +S    V      L +   ++ D+G Y C A+ + 
Sbjct: 318 ECKATGKP--RPTYRWLKNGLPLLLQSRIEMVNG---VLMIHNVNQSDAGMYQCLAENKY 372

Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
             I A A L +   L +   F L Q+   KK ++
Sbjct: 373 GTIYASAELKI---LASAPTFALNQL---KKTII 400



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 118/289 (40%), Gaps = 35/289 (12%)

Query: 121 SVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
           SV   P F  EP+   F   ++E+ V   C+A G P P   W+ NG  I     + R  +
Sbjct: 2   SVDYGPVFMQEPDDIIFPTDSDEKKVALNCEARGNPIPNYRWLRNGTEI-DLESDYRYSL 60

Query: 178 GPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT--EAPKDEY--TVD 232
                 I N  ++ D+G+Y C A N+ G +     +   A  P  T  +AP        D
Sbjct: 61  IDGAFIISNPSEAKDSGHYQCLAANTFGSILSREVILQFACFPGGTSGKAPATSSGDVRD 120

Query: 233 GKTVVLTCRVFGAPKPEV--NWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYT 286
              V  + R  G    E+  +W+ N+          R+   ETG+L I+ V  +D G Y 
Sbjct: 121 AGLVPGSGRSSG----EIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQASDVGSYI 176

Query: 287 CFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATFRCNAVSDP 335
           C  +N +  A+       LT++    + +     EV          G +    C A+ +P
Sbjct: 177 CLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNP 236

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
               +I W++ +  I  +S  R  Q+    L +      D+G Y CRA+
Sbjct: 237 V--PTITWMKINGYIPSKSRLRKSQA---VLEIPNVQLDDAGIYECRAE 280



 Score = 46.6 bits (109), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 69/165 (41%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  ++++V + C   G+P P   W K    +  + RI+    G SL I +   SD+
Sbjct: 396 KKTIIIPKDQEVIIECKPQGSPKPTISWKKGDKAVRENKRIAILPDG-SLRILNASKSDE 454

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI-- 157
           G Y C   N  G A+  +  +SV       + P+       E++   CKA   P  ++  
Sbjct: 455 GKYICRGENVFGSAE-ITATVSVKEPTRIELTPKRTELTVGESIVLNCKAIHDPSLDVTF 513

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          + R +     + I N+     G YGC
Sbjct: 514 YWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILLMHAGRYGC 558


>gi|317418927|emb|CBN80965.1| Neural cell adhesion molecule L1-like protein [Dicentrarchus
           labrax]
          Length = 1395

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 196/746 (26%), Positives = 306/746 (41%), Gaps = 104/746 (13%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFS 97
           R +   ++ + ++L CI  G P PQ  W K G  +PI    +    N+GK LI+  VE  
Sbjct: 261 RSETQLVKEEDLKLECIAEGFPTPQVEWVKVGHRLPI----KAKLENHGKLLIVPRVEQE 316

Query: 98  DQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI 157
           D G Y C+  N +GEA  Y   +++   P +  EPE   +     V  +C ASG P+P I
Sbjct: 317 DSGKYMCKAKNALGEAVHY-FTVTIEEPPEWVSEPESQLSMIGSDVLIKCSASGTPQPTI 375

Query: 158 HWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAH 217
            W  NG P+ +AP   R+ +G + I + N + SD+  Y C A+N    +  +  + ++  
Sbjct: 376 TWRVNGVPLQEAPAANRKVLG-DTILLRNAKASDSAVYQCEASNRHRTLLSNANIMIMNL 434

Query: 218 APEITEAPKDEYT-VDGKTVVLTCRVFGAPKPEVNWIHNQ--KELTGGRYTILETGDLKI 274
            P I     ++Y+ V+GK V++ C+VF +P   V W  +   + + G R+ + + G L+I
Sbjct: 435 PPMILTKEGEDYSAVEGKGVMMHCKVFSSPPSTVTWSKDDSSESVEGPRFAVHDNGSLEI 494

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             V   D+G+YTC A+N  G++     L VK+ T I   PE  ++  G +A   C A  D
Sbjct: 495 YSVEKGDTGQYTCLAKNTEGSSAIDTMLYVKDPTRIVVPPEHLQILIGTTAQLSCLAEYD 554

Query: 335 PSLK--LSIVWLRGSEPIDF---ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            S K  + ++W +    I     E+   FV+  D  L +   S  D G YTC A+T +D 
Sbjct: 555 ESFKNDIELLWEKDDMEIALNYTENSRYFVE--DGILQIINVSHWDQGVYTCVARTPVDQ 612

Query: 390 IEAQATLTVQVPL-------------------EAPSNFTLIQVIDAKKAVVSWNPVSPQ- 429
             A A L V   L                   +AP    L +   +K   + WNP     
Sbjct: 613 DTASAWLIVLGELTYQQYFCSQAKGSDTPNVPDAPEYLVLSER-KSKSVKLKWNPGDNHN 671

Query: 430 -SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
            S       Y+   W      G+ +EL+   G   +  +         F RV   N    
Sbjct: 672 SSTTEFIIEYEESQWEP----GNWKELLRVPGNHNSAVLKLHGNVDYCF-RVSGVNSVGR 726

Query: 489 GPPSEIIS-FVTPEGVPGTVQSLEAIPLGSSAFY---LKW--VKPEQPNGVLMGYKIKY- 541
           GP SE    +  P   P   ++ E I +     +   + W  + P + NG  + YK+ Y 
Sbjct: 727 GPSSEPTERYKPPAAAPD--KNPENIKIEGHLAHEMDINWEPLLPIEHNGPGLEYKVSYR 784

Query: 542 -QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF-- 598
            Q ++      +++R  ++   T T            Y I +      G G + K +   
Sbjct: 785 RQDLEEDWQEHMVKRHSFVVKNTPTFVP---------YEIKIQAKNNQGWGPDPKIVTGY 835

Query: 599 ---YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDV 655
                P   PD+V       + + +SWT + + + +     YRI W              
Sbjct: 836 SGEDFPSAAPDDVAVEVMNSSVVKVSWTRVHKDKLHGHLGGYRINW-------------- 881

Query: 656 LDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 715
             WR   LV                    K   G    L +  G+     V    P S+ 
Sbjct: 882 --WRLRSLV------------------DSKKSHGDKHTLTI-PGDRNHAAVPGLTPFSEY 920

Query: 716 FARVLAFNGAYNGPPSEIISFVTPEG 741
              V+ FNG  NGP S  ++F TPEG
Sbjct: 921 SLIVMTFNGRGNGPGSHPVNFKTPEG 946



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 94/198 (47%), Gaps = 11/198 (5%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW------TEKDGEGSIRE 454
            P  AP +   ++V+++    VSW  V    L GH  GY++  W        K   G    
Sbjct: 841  PSAAPDDVA-VEVMNSSVVKVSWTRVHKDKLHGHLGGYRINWWRLRSLVDSKKSHGDKHT 899

Query: 455  LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
            L +  G+     V    P S+    V+ FNG  NGP S  ++F TPEGVP          
Sbjct: 900  LTI-PGDRNHAAVPGLTPFSEYSLIVMTFNGRGNGPGSHPVNFKTPEGVPEKNPVFRVTD 958

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLE 573
            +      L W  P +PNG+L GY ++YQ +  T +VGPL  +   IS+P TT   L  LE
Sbjct: 959  VQKHTVSLVWAPPLEPNGILTGYLLEYQLINDTEEVGPL--QTVDISNPDTTKWTLRDLE 1016

Query: 574  PSTKYRIHLAGYTKAGDG 591
            P +KY+++L   T  G G
Sbjct: 1017 PVSKYKLYLRSCTTVGCG 1034



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 94/385 (24%), Positives = 153/385 (39%), Gaps = 52/385 (13%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINP---SDRISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           + C   G P P+  W K+G   +P      + + N G  +I  +   ++ QG+Y C  SN
Sbjct: 62  MTCEAKGNPEPEFRWMKNGQEFDPFLDPRLMKEENSGTFVIPNNGNLTEYQGTYRCYASN 121

Query: 109 GVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECK-ASGLPEPEIHWVHNGK 164
            +G A S  I+  V   P F   T++P  +   E +  T +C    G+P  +I+W+    
Sbjct: 122 KLGTAISKEIEFIVPHVPKFPKETLDPVVVE--EGQPFTLKCDPPKGIPPLQIYWMTIS- 178

Query: 165 PISQAPPNPRRKVGPNRITI--ENLRKSDTGNYGCNAT----------NSLGYVYK---- 208
            +     + R  +G N        + K    +Y C A           N++  + +    
Sbjct: 179 -LQHIEQDERVSMGLNGDLYFSHAVEKDSRRDYCCFAAFPRIRTIVQKNAMSVIVQTKKS 237

Query: 209 ----DVYVNVLAHAPEITEAPKDEYT----VDGKTVVLTCRVFGAPKPEVNWIHNQKELT 260
               +    +L   P +   P  E +    V  + + L C   G P P+V W+       
Sbjct: 238 DTSPETANAILQRRPSLL-TPSSERSETQLVKEEDLKLECIAEGFPTPQVEWVK-----V 291

Query: 261 GGRYTI---LET-GDLKIT-DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE 315
           G R  I   LE  G L I   V   DSG+Y C A+N LG A    ++T++E      +PE
Sbjct: 292 GHRLPIKAKLENHGKLLIVPRVEQEDSGKYMCKAKNALGEAVHYFTVTIEEPPEWVSEPE 351

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPI-DFESEPRFVQSNDYSLTVTKSSEL 374
                 G     +C+A   P  + +I W     P+ +  +  R V  +   L   K+S  
Sbjct: 352 SQLSMIGSDVLIKCSASGTP--QPTITWRVNGVPLQEAPAANRKVLGDTILLRNAKAS-- 407

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQ 399
           DS  Y C A      + + A + + 
Sbjct: 408 DSAVYQCEASNRHRTLLSNANIMIM 432



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/296 (21%), Positives = 118/296 (39%), Gaps = 39/296 (13%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGK-------PISQAPPNPRRKVGPNRITIENLRKSDT 192
           +E+    C+A G PEPE  W+ NG+       P      N    V PN   +   +    
Sbjct: 57  DESFPMTCEAKGNPEPEFRWMKNGQEFDPFLDPRLMKEENSGTFVIPNNGNLTEYQ---- 112

Query: 193 GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEV 250
           G Y C A+N LG         ++ H P+  +   D   V +G+   L C    G P  ++
Sbjct: 113 GTYRCYASNKLGTAISKEIEFIVPHVPKFPKETLDPVVVEEGQPFTLKCDPPKGIPPLQI 172

Query: 251 NW--IHNQKELTGGRYTILETGDLKITDVAFADS-GEYTCFA----------RNKLG--- 294
            W  I  Q      R ++   GDL  +     DS  +Y CFA          +N +    
Sbjct: 173 YWMTISLQHIEQDERVSMGLNGDLYFSHAVEKDSRRDYCCFAAFPRIRTIVQKNAMSVIV 232

Query: 295 -------TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS 347
                  + + + ++  +  + +T   E  E +  +    +   +++      + W++  
Sbjct: 233 QTKKSDTSPETANAILQRRPSLLTPSSERSETQLVKEEDLKLECIAEGFPTPQVEWVKVG 292

Query: 348 EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE 403
             +  +++   ++++   L V +  + DSG+Y C+A+  L       T+T++ P E
Sbjct: 293 HRLPIKAK---LENHGKLLIVPRVEQEDSGKYMCKAKNALGEAVHYFTVTIEEPPE 345


>gi|354467484|ref|XP_003496199.1| PREDICTED: contactin-5-like [Cricetulus griseus]
          Length = 1089

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 158/599 (26%), Positives = 256/599 (42%), Gaps = 35/599 (5%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           A +   V++ C   G P+P   W K    I    R+ +      L I +++  D G Y C
Sbjct: 302 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRKSQ--AVLEIPNLQLDDAGLYEC 359

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N  G   S+   L +   P++  +           + +ECKA+G P+P   W+ NG 
Sbjct: 360 TAENSRGR-NSFRGQLQIYTYPHWVQKLNDTQLDSGSPLQWECKATGKPKPTYRWLKNGA 418

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--EIT 222
           PI    P  R       + I ++ +SD G Y C A N  G +Y    + VLA  P  E+ 
Sbjct: 419 PIL---PQSRVDTVNGILAIHSVNQSDAGMYQCLAENKYGAIYASAELKVLASPPSFELN 475

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           +  K       + V++ C+  GAPKP ++W    K + +  R  IL  G L+I + + AD
Sbjct: 476 QVKKTIIVTKDREVLIECQPQGAPKPAISWRKGDKAVRSNKRIAILPDGSLRILNASKAD 535

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+Y C   N  G+A+   SL+VKE T I   P+  E+  G+S    C A+ D SL ++ 
Sbjct: 536 EGKYICQGVNIFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDSSLDVTF 595

Query: 342 VWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A L
Sbjct: 596 YWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAEL 655

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
            V+ P   P    +++ I    A +SW+P +          Y +Q  +       I + +
Sbjct: 656 LVRGP-PGPPGVVIVEEITESTATLSWSPATDN--HSPISSYNLQARSPFSLGWQIVKTV 712

Query: 457 --VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLEAI 513
             V  G+  +       P  +   RV+A N    G PS     + T E VP T  S  + 
Sbjct: 713 PEVITGDMESAMAVDLNPWVEYEFRVVASNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSG 772

Query: 514 PLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISDPTTTSAK 568
             G      + W  V  E  NG   GY + ++    +G K     E++   S+ +    +
Sbjct: 773 RSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSEASKFIYR 827

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNLVISW 622
              + P T + + +  Y   GDG  S+ +        P   P +V+    + + ++++W
Sbjct: 828 DESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPTAAPTDVKAMSVSVSEILVTW 886



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 159/664 (23%), Positives = 244/664 (36%), Gaps = 79/664 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + A
Sbjct: 243 NLYISKVQTSDVGSYICLVKNAVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 302

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I NL+  D G Y 
Sbjct: 303 AKGTTVKMECFALGNPVPTITWMKVNG----YIPSKSRLRKSQAVLEIPNLQLDDAGLYE 358

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + +  + P   +   D     G  +   C+  G PKP   W+ N 
Sbjct: 359 CTAENSRGRNSFRGQLQIYTY-PHWVQKLNDTQLDSGSPLQWECKATGKPKPTYRWLKNG 417

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITDQ 313
             +          G L I  V  +D+G Y C A NK G    S  L V        +   
Sbjct: 418 APILPQSRVDTVNGILAIHSVNQSDAGMYQCLAENKYGAIYASAELKVLASPPSFELNQV 477

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +   V   +     C     P  K +I W +G + +   S  R     D SL +  +S+
Sbjct: 478 KKTIIVTKDREVLIECQPQGAP--KPAISWRKGDKAV--RSNKRIAILPDGSLRILNASK 533

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR- 432
            D G+Y C+        E  A+L+V+ P          ++   +  V++   +   SL  
Sbjct: 534 ADEGKYICQGVNIFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDSSLDV 593

Query: 433 -----------------GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
                            GHF   + Q       +  IR +++         V     +  
Sbjct: 594 TFYWTLKGQPIDFEKEGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQTTADSVS 650

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
           + A +L       GPP          G PG V   E   +  S   L W      +  + 
Sbjct: 651 DEAELLV-----RGPP----------GPPGVVIVEE---ITESTATLSWSPATDNHSPIS 692

Query: 536 GYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y ++ +S     +G  +++ +P +      SA    L P  +Y   +      G G  S
Sbjct: 693 SYNLQARS--PFSLGWQIVKTVPEVITGDMESAMAVDLNPWVEYEFRVVASNPIGTGDPS 750

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P NV GR    + LVI+W  + E   N   F Y + +R + T  
Sbjct: 751 IPSRMIRTNEAVPKTAPSNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT-R 809

Query: 649 AWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV---NKGESTT 703
            W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V    +GE T 
Sbjct: 810 GWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVVICSAEGEPTA 867

Query: 704 TEVD 707
              D
Sbjct: 868 APTD 871



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 149/394 (37%), Gaps = 39/394 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           K V L C   G P P   W ++G  I+  SD       G  +I    E  D G Y C  +
Sbjct: 107 KNVALNCEVRGNPTPTYRWLRNGTEIDLESDYRYSLIDGTFIISNPNEVRDSGLYQCLAT 166

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N  G   S    L       F+      ++  E + V   C      PE    WV N  P
Sbjct: 167 NTFGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 226

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
            S    + RR +      + I  ++ SD G+Y C   N++                  V 
Sbjct: 227 -SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAVTNARVLSPPTPLTLRNDGVM 285

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            +    +  H P    A K      G TV + C   G P P + W+     +        
Sbjct: 286 GEYEPKIEVHFPFTVTAAK------GTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRK 339

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               L+I ++   D+G Y C A N  G     G L +  + H   +  D ++++G    +
Sbjct: 340 SQAVLEIPNLQLDDAGLYECTAENSRGRNSFRGQLQIYTYPHWVQKLNDTQLDSGSPLQW 399

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  K +  WL+   PI  +S    V + +  L +   ++ D+G Y C A+ + 
Sbjct: 400 ECKATGKP--KPTYRWLKNGAPILPQSR---VDTVNGILAIHSVNQSDAGMYQCLAENKY 454

Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
             I A A L V   L +P +F L QV   KK ++
Sbjct: 455 GAIYASAELKV---LASPPSFELNQV---KKTII 482



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 121/297 (40%), Gaps = 35/297 (11%)

Query: 113 AKSYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
           + ++  D SV   P F  EP+   F   ++E+ V   C+  G P P   W+ NG  I   
Sbjct: 76  SDAFKQDESVDYGPVFMQEPDDVIFPTDSDEKNVALNCEVRGNPTPTYRWLRNGTEIDLE 135

Query: 170 PPNPRRKVGPNRITIENLRK-SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
             + R  +      I N  +  D+G Y C ATN+ G +         A+    +   +  
Sbjct: 136 S-DYRYSLIDGTFIISNPNEVRDSGLYQCLATNTFGSILSREATLQFAYLGNFSGRTRSA 194

Query: 229 YTV-DGKTVVLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVA 278
            +V +G+ VVL C    +P P       +W+ N+          R+   ETG+L I+ V 
Sbjct: 195 VSVREGQGVVLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQ 250

Query: 279 FADSGEYTCFARNKLGTAQ---GSGSLTVKEHTHITDQPEDYEVE--------AGQSATF 327
            +D G Y C  +N +  A+       LT++    + +     EV          G +   
Sbjct: 251 TSDVGSYICLVKNAVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKM 310

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
            C A+ +P    +I W++ +  I  +S  R  Q+    L +      D+G Y C A+
Sbjct: 311 ECFALGNPV--PTITWMKVNGYIPSKSRLRKSQA---VLEIPNLQLDDAGLYECTAE 362



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 11/166 (6%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  ++++V + C   G P P   W K    +  + RI+    G SL I +   +D+
Sbjct: 478 KKTIIVTKDREVLIECQPQGAPKPAISWRKGDKAVRSNKRIAILPDG-SLRILNASKADE 536

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA---SGLPEPE 156
           G Y C+  N  G A+  +  LSV       + P+       E++   CKA   S L +  
Sbjct: 537 GKYICQGVNIFGSAEIIA-SLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDSSL-DVT 594

Query: 157 IHWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
            +W   G+PI          + R +     + I N+     G YGC
Sbjct: 595 FYWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILLMHAGRYGC 640



 Score = 42.4 bits (98), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 23/203 (11%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP++   + V    + +V+W   + +SL G  +G+++  W + + E S  E +  +G
Sbjct: 865  PTAAPTDVKAMSV-SVSEILVTWKH-NKESL-GRPQGFEIGYWKDMEPEDSA-ETVRTRG 920

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT----PEGVPGTVQSLEAIPLG 516
              +   V      +     V A+NGA  GP S I+S  T    P   PG ++  +     
Sbjct: 921  NESFVMVTGLEGDTLYHLTVRAYNGAGYGPLSRIVSATTKRRPPSEPPGNLRWEQQ---- 976

Query: 517  SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
             S   L W  V+P      +MGYK+ Y+  +G   G ++E        T     +  L  
Sbjct: 977  GSQVSLGWEPVRPLANESEVMGYKVFYRQ-EGHSKGQVIE--------TQKPQAVVPLPE 1027

Query: 575  STKYRIHLAGYTKAGDGAESKYL 597
            +  Y I +  Y++ GDG  S  +
Sbjct: 1028 AGVYIIEVRAYSEGGDGTASSQI 1050


>gi|335294754|ref|XP_003129849.2| PREDICTED: contactin-5 [Sus scrofa]
          Length = 1026

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 160/609 (26%), Positives = 261/609 (42%), Gaps = 45/609 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           A +   V++ C   G P+P   W K    I    R+ +      L I +V+  D G Y C
Sbjct: 238 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRKSQ--AVLEIPNVQLDDAGIYEC 295

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N  G+  S+   L V   P++  +           + +ECKA+G P P   W+ NG 
Sbjct: 296 RAENSRGK-NSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNGV 354

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--EIT 222
           P+       R ++    + I N+ +SD G Y C A N  G +Y    + +LA AP   + 
Sbjct: 355 PLLL---QSRIEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFALN 411

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           +  K      G+ VV+ C+  G+PKP ++W    K +    R  IL  G L+I + + +D
Sbjct: 412 QLKKTIIVTKGQEVVIECKPQGSPKPTISWKKGDKAVRENKRIAILPDGSLRILNASKSD 471

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+Y C   N  G+A+   S++VKE T I   P+  E+  G+S    C A+ D SL ++ 
Sbjct: 472 EGKYVCQGENVFGSAEIIASISVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 531

Query: 342 VWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W    +PIDF+ E         Q++   L +     + +G+Y CR QT  D +  +A L
Sbjct: 532 YWTLKGQPIDFQKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAEL 591

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKDGE 449
            V+ P   P    +++ I    A +SW+P +          Y +Q        W      
Sbjct: 592 LVRGP-PGPPGIVIVEEITDSTATLSWSPAADN--HSPISSYNLQARSPFSLGWQTVK-- 646

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQ 508
            ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T  
Sbjct: 647 -TVPEIITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAP 703

Query: 509 SLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISDPT 563
           +  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+ +
Sbjct: 704 TNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSEAS 758

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNL 618
               +   + P T + + +  Y   GDG  S+ +        P   P +V+    + + +
Sbjct: 759 KFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEI 818

Query: 619 VISWTAMPE 627
           +++W  + E
Sbjct: 819 LVAWKHIKE 827



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 160/650 (24%), Positives = 242/650 (37%), Gaps = 76/650 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + A
Sbjct: 179 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 238

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I N++  D G Y 
Sbjct: 239 AKGTTVKMECFALGNPVPTITWMKVNG----YIPSKSRLRKSQAVLEIPNVQLDDAGIYE 294

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V  + P   E   D     G  +   C+  G P+P   W+ N 
Sbjct: 295 CRAENSRGKNSFRGQLQVYTY-PHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG 353

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITDQ 313
             L       +  G L I +V  +D+G Y C A NK G    S  L +        +   
Sbjct: 354 VPLLLQSRIEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQL 413

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +   V  GQ     C     P  K +I W +G + +      R     D SL +  +S+
Sbjct: 414 KKTIIVTKGQEVVIECKPQGSP--KPTISWKKGDKAV--RENKRIAILPDGSLRILNASK 469

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI----------QVIDAKKAV 420
            D G+Y C+ +      E  A+++V+ P      P    L            + DA   V
Sbjct: 470 SDEGKYVCQGENVFGSAEIIASISVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 529

Query: 421 VSW-----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
             +      P+  Q   GHF   + Q       +  IR +++         V     +  
Sbjct: 530 TFYWTLKGQPIDFQKEGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQTTADSVS 586

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
           + A +L       GPP          G PG V   E   +  S   L W      +  + 
Sbjct: 587 DEAELLV-----RGPP----------GPPGIVIVEE---ITDSTATLSWSPAADNHSPIS 628

Query: 536 GYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y ++ +S     +G   ++ +P I      SA    L P  +Y   +      G G  S
Sbjct: 629 SYNLQARS--PFSLGWQTVKTVPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPS 686

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P NV GR    + LVI+W  + E   N   F Y + +R + T  
Sbjct: 687 TPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT-R 745

Query: 649 AWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
            W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V
Sbjct: 746 GWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVV 793



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 152/641 (23%), Positives = 254/641 (39%), Gaps = 86/641 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+GVP+    RI   N    L+I +V  SD G Y C   N  G A 
Sbjct: 337 CKATGKPRPTYRWLKNGVPLLLQSRIEMVN--GVLMIHNVNQSDAGMYQCLAENKYG-AI 393

Query: 115 SYSIDLSVLA-APYFTVE--PEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
             S +L +LA AP F +    + I   + + V  ECK  G P+P I W    K + +   
Sbjct: 394 YASAELKILASAPTFALNQLKKTIIVTKGQEVVIECKPQGSPKPTISWKKGDKAVRE--- 450

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP-EITEAPKDEY 229
           N R  + P+  + I N  KSD G Y C   N  G    ++  ++    P  I   PK   
Sbjct: 451 NKRIAILPDGSLRILNASKSDEGKYVCQGENVFGSA--EIIASISVKEPTRIELTPKRTE 508

Query: 230 TVDGKTVVLTCRVFGAPKPEVNW--------IHNQKELTGGRYTILE----TGDLKITDV 277
              G+++VL C+       +V +        I  QKE  GG +  +     + DL I ++
Sbjct: 509 LTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDFQKE--GGHFESIRAQASSADLMIRNI 566

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVK-----EHTHITDQPEDYEVEAGQSATFRCNAV 332
               +G Y C  +    +      L V+         I ++  D       +AT   +  
Sbjct: 567 LLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITD------STATLSWSPA 620

Query: 333 SDPSLKLSIVWLRGSEPIDF-----ESEPRFVQSN-------------DYSLTVTKSSEL 374
           +D    +S   L+   P        ++ P  +  +             +Y   V  ++ +
Sbjct: 621 ADNHSPISSYNLQARSPFSLGWQTVKTVPEIITGDMESAMAVDLNPWVEYEFRVVATNPI 680

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
            +G       T    I         VP  AP+N +  +     + V++W PVS +   G 
Sbjct: 681 GTGD----PSTPSRMIRTNEA----VPKTAPTNVSG-RSGRRHELVIAWEPVSEEFQNGE 731

Query: 435 FRGYKVQTWTEKDGEGSIRELIVNKGESTT-TEVDKFVPASKNF-ARVLAFNGAYNGPPS 492
             GY V      +G    +E +V   E++     D+ VP    F  +V  +N   +GP S
Sbjct: 732 GFGYIVAF--RPNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFS 789

Query: 493 EIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY-QSVKGTKVG 550
           +I+   + EG P    + ++A  +  S   + W   ++  G   G++I Y + ++     
Sbjct: 790 QIVVICSAEGEPSAAPTDVKATSVSVSEILVAWKHIKESLGRPQGFEIGYWKDMEQEDAA 849

Query: 551 PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNP 605
             ++     +    +S  L GLE +T Y   +  Y  AG G  S  +        P + P
Sbjct: 850 ETVK-----TRGNESSIILTGLEGNTLYHFTVRAYNGAGYGPPSSEVSATTKKSPPSQAP 904

Query: 606 DNV--EGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           +N+  E +GS    L + W  +  + + +    Y++F+R+ 
Sbjct: 905 NNLRWEQQGS---QLSLGWEPVRPLANESEVMGYKVFYRQE 942



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 148/394 (37%), Gaps = 39/394 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           KKV L C   G P+P   W ++G  I+  SD       G  +I    E  D G Y C  +
Sbjct: 43  KKVALNCEARGNPVPNYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLAA 102

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N  G   S    L       F+      ++  E + V   C      PE    WV N  P
Sbjct: 103 NTFGSVLSREAILQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 162

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
            S    + RR +      + I  ++ SD G+Y C   N++                  V 
Sbjct: 163 -SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVM 221

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            +    +  H P    A K      G TV + C   G P P + W+     +        
Sbjct: 222 GEYEPKIEVHFPFTVTAAK------GTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRK 275

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               L+I +V   D+G Y C A N  G     G L V  + H  ++  D ++++G    +
Sbjct: 276 SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRW 335

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  + +  WL+   P+  +S    V      L +   ++ D+G Y C A+ + 
Sbjct: 336 ECKATGKP--RPTYRWLKNGVPLLLQSRIEMVNG---VLMIHNVNQSDAGMYQCLAENKY 390

Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
             I A A L +   L +   F L Q+   KK ++
Sbjct: 391 GAIYASAELKI---LASAPTFALNQL---KKTII 418



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 116/288 (40%), Gaps = 33/288 (11%)

Query: 121 SVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
           SV   P F  EP+   F   ++E+ V   C+A G P P   W+ NG  I          +
Sbjct: 20  SVDYGPVFLQEPDDIIFPTDSDEKKVALNCEARGNPVPNYRWLRNGTEIDLESDYRYSLI 79

Query: 178 GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTV 236
               I        D+G+Y C A N+ G V     +   A+    +   +   +V +G+ V
Sbjct: 80  DGTFIISNPSEAKDSGHYQCLAANTFGSVLSREAILQFAYLGNFSGRTRSAVSVREGQGV 139

Query: 237 VLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTC 287
           VL C    +P P       +W+ N+          R+   ETG+L I+ V  +D G Y C
Sbjct: 140 VLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYIC 195

Query: 288 FARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATFRCNAVSDPS 336
             +N +  A+       LT++    + +     EV          G +    C A+ +P 
Sbjct: 196 LVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPV 255

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
              +I W++ +  I  +S  R  Q+    L +      D+G Y CRA+
Sbjct: 256 --PTITWMKVNGYIPSKSRLRKSQA---VLEIPNVQLDDAGIYECRAE 298



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 67/165 (40%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  + ++V + C   G+P P   W K    +  + RI+    G SL I +   SD+
Sbjct: 414 KKTIIVTKGQEVVIECKPQGSPKPTISWKKGDKAVRENKRIAILPDG-SLRILNASKSDE 472

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEI 157
           G Y C+  N  G A+  +  +SV       + P+       E++   CKA      +   
Sbjct: 473 GKYVCQGENVFGSAEIIA-SISVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 531

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          + R +     + I N+     G YGC
Sbjct: 532 YWTLKGQPIDFQKEGGHFESIRAQASSADLMIRNILLMHAGRYGC 576



 Score = 40.4 bits (93), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 15/199 (7%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P  AP++     V    + +V+W  +  +SL G  +G+++  W + + E +  E +  +G
Sbjct: 801 PSAAPTDVKATSV-SVSEILVAWKHIK-ESL-GRPQGFEIGYWKDMEQEDAA-ETVKTRG 856

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
             ++  +      +     V A+NGA  GPPS  +S  T +  P    +        S  
Sbjct: 857 NESSIILTGLEGNTLYHFTVRAYNGAGYGPPSSEVSATTKKSPPSQAPNNLRWEQQGSQL 916

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            L W  V+P      +MGYK+ Y+  +G     ++E        T     +  L  +  Y
Sbjct: 917 SLGWEPVRPLANESEVMGYKVFYRQ-EGHSNSQVIE--------TQKPQAVVPLPDAGVY 967

Query: 579 RIHLAGYTKAGDGAESKYL 597
            I +  Y++ GDG  S  +
Sbjct: 968 IIEVRAYSEGGDGTASSQI 986


>gi|345323035|ref|XP_003430665.1| PREDICTED: contactin-5 [Ornithorhynchus anatinus]
          Length = 1023

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 164/629 (26%), Positives = 271/629 (43%), Gaps = 42/629 (6%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           A +   V++ C   G P+P   W K    +P     R SQG     L I +V+  D G Y
Sbjct: 235 AAKGTTVKMECFALGNPVPTISWVKVNGYIPSKARLRKSQG----VLEIPNVQLDDAGMY 290

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C   N  G   S+   L V   P++       +      + +ECKA G P P + W+ N
Sbjct: 291 ECRAENSRGR-NSFRGQLQVFTYPHWVERLNDTHLDSGSPLRWECKAIGKPRPTVRWLKN 349

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--E 220
           G P+    P    ++    + I N+ +SD G Y C A N  G +Y +  + +LA AP   
Sbjct: 350 GLPLW---PQSGIEMVNGILMIHNVNQSDAGMYQCLAENKYGTIYANAELKILASAPTFA 406

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT-ILETGDLKITDVAF 279
           + +  +      G+ V++ C+   +PKP ++W    K +   + T +L  G L+I + + 
Sbjct: 407 LNQLKQTIVITKGQEVIIECKPQASPKPTISWKKGDKAVRESKRTAVLPDGSLRILNASK 466

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
            D G+Y C   N  G+A+   S+ VKE T I   P+  E+  G+S    C A+ DPSL +
Sbjct: 467 YDEGKYICQGENVFGSAEFIASVFVKEPTRIELAPKRTELTVGESIVLSCKAIHDPSLDV 526

Query: 340 SIVWLRGSEPIDFES-----EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +  W    +PIDFE      E    Q++   L +     + +G+Y CR QT  D +  +A
Sbjct: 527 TFYWTLKGQPIDFEKDGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEA 586

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD-GEGSIR 453
            L V+ P  +P    +++ I    A +SW+P +          Y +Q  +    G  +++
Sbjct: 587 ELLVRGPPGSP-GIVIVEEITENTATLSWSPGADN--HSPITAYNLQARSPFSLGWQTVK 643

Query: 454 EL--IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSL 510
            +  ++     +   VD   P  +   RV+A N    G PS     + T E VP T  + 
Sbjct: 644 TVPDVITGDMESAMAVD-LNPWVEYEFRVVATNPIGTGDPSAPSRMIRTNEAVPKTAPAN 702

Query: 511 EAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISDPTTT 565
            +   G      + W  V  E  NG   GY + ++    +G K     E++   SD +  
Sbjct: 703 VSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSDASKF 757

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNLVI 620
             +   + P T + + +  Y   GDG  S  +        P   P +V+    + + +++
Sbjct: 758 IYRDESVPPLTPFEVKVGVYNNKGDGPFSHIVVICSAEGEPSTAPTDVKATSVSVSEILV 817

Query: 621 SWTAMPEIEHNAPHFKYRIFWRRHNTGEA 649
           SW  + E       F+   +WR  +  EA
Sbjct: 818 SWKHIKESLGRPQGFEVG-YWRDMDQEEA 845



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 153/389 (39%), Gaps = 42/389 (10%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN-PSD---RISQGNYGKSLIIKHVEFSDQGSYTC 104
           KKV L C   G P P   W ++G  I+  SD    + +GN+   +I    E  D GSY C
Sbjct: 40  KKVALDCEARGDPAPNYRWLRNGTEIDLESDYRYSLIEGNF---IISSPSEAKDSGSYQC 96

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHN 162
             SN  G   S    L       F+      ++  E + V   C      PE    WV N
Sbjct: 97  LASNTFGSILSREAILQFAYLRNFSGRTRSAVSVREGQGVVLICSPPPHSPEISYSWVFN 156

Query: 163 GKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGY--------------- 205
             P S    + RR +  +   + I  ++ +D G+Y C   N++                 
Sbjct: 157 EFP-SFVAEDSRRFISQDTGNLYISKVQAADVGSYICLVKNTVTNARVLSPPTPLTLRND 215

Query: 206 -VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRY 264
            V  +    +  H P +  A K      G TV + C   G P P ++W+     +     
Sbjct: 216 GVMGEYEPKIEVHFPFMVTAAK------GTTVKMECFALGNPVPTISWVKVNGYIPSKAR 269

Query: 265 TILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
                G L+I +V   D+G Y C A N  G     G L V  + H  ++  D  +++G  
Sbjct: 270 LRKSQGVLEIPNVQLDDAGMYECRAENSRGRNSFRGQLQVFTYPHWVERLNDTHLDSGSP 329

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             + C A+  P  + ++ WL+   P+  +S    V      L +   ++ D+G Y C A+
Sbjct: 330 LRWECKAIGKP--RPTVRWLKNGLPLWPQSGIEMVNG---ILMIHNVNQSDAGMYQCLAE 384

Query: 385 TELDFIEAQATLTVQVPLEAPSNFTLIQV 413
            +   I A A L +   L +   F L Q+
Sbjct: 385 NKYGTIYANAELKI---LASAPTFALNQL 410



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 118/284 (41%), Gaps = 25/284 (8%)

Query: 121 SVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
           SV   P F  EP+   F   ++E+ V  +C+A G P P   W+ NG  I          +
Sbjct: 17  SVDYGPVFVQEPDDVVFPADSDEKKVALDCEARGDPAPNYRWLRNGTEIDLESDYRYSLI 76

Query: 178 GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTV 236
             N I        D+G+Y C A+N+ G +     +   A+    +   +   +V +G+ V
Sbjct: 77  EGNFIISSPSEAKDSGSYQCLASNTFGSILSREAILQFAYLRNFSGRTRSAVSVREGQGV 136

Query: 237 VLTCR-VFGAPKPEVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARN 291
           VL C     +P+   +W+ N+          R+   +TG+L I+ V  AD G Y C  +N
Sbjct: 137 VLICSPPPHSPEISYSWVFNEFPSFVAEDSRRFISQDTGNLYISKVQAADVGSYICLVKN 196

Query: 292 KLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATFRCNAVSDPSLKLS 340
            +  A+       LT++    + +     EV          G +    C A+ +P   +S
Sbjct: 197 TVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFMVTAAKGTTVKMECFALGNPVPTIS 256

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
            V + G  P    S+ R  +S    L +      D+G Y CRA+
Sbjct: 257 WVKVNGYIP----SKARLRKSQGV-LEIPNVQLDDAGMYECRAE 295



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 15/199 (7%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P  AP++     V    + +VSW  +  +SL G  +G++V  W + D E +  E +   G
Sbjct: 798 PSTAPTDVKATSV-SVSEILVSWKHIK-ESL-GRPQGFEVGYWRDMDQEEAA-ETVKTGG 853

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
             ++  + +    +     V AFNGA  GPPS  I   T +  P             S  
Sbjct: 854 NESSVLLTRLEGNTLYHLTVRAFNGAGYGPPSAEIQAATKKSPPSQAPQNIMWEQQGSQV 913

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            L W  V+P      +MGYK+ ++  +G     ++E        T  +  +  L     Y
Sbjct: 914 SLGWEPVRPLANESEVMGYKVSFRH-EGQSNSEVIE--------TQKNQAVVLLPDVGVY 964

Query: 579 RIHLAGYTKAGDGAESKYL 597
            I +  +++ GDG  S  +
Sbjct: 965 IIEVRAFSEGGDGTASSQI 983


>gi|410972405|ref|XP_003992650.1| PREDICTED: contactin-5-like, partial [Felis catus]
          Length = 680

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 164/611 (26%), Positives = 263/611 (43%), Gaps = 49/611 (8%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           A +   V++ C   G P+P   W K    +P     R SQ      L I +V+  D G Y
Sbjct: 81  AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQA----VLEIPNVQLDDAGLY 136

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C   N  G+  S+   L V   P++  +           + +ECKA+G P P   W+ N
Sbjct: 137 ECRAENSRGK-NSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKN 195

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--E 220
           G  +S  P N R ++    + I N+ +SD G Y C A N  G ++    + +LA AP   
Sbjct: 196 G--VSLLPQN-RIEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIFASAELKILASAPTFA 252

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
           + +  K       + V++ C+  G+PKP ++W    K +    R  IL  G L+I + + 
Sbjct: 253 LNQMKKTIIITKDQEVIIQCKPQGSPKPTISWKKGDKAVRENKRIAILPDGSLRILNASK 312

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           +D G+Y C   N  G+A+   S++VKE T I   P+  E+  G+S    C A+ D SL +
Sbjct: 313 SDEGKYVCQGENVFGSAETIASVSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 372

Query: 340 SIVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +  W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A
Sbjct: 373 TFYWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEA 432

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKD 447
            L V+ P   P    +++ I    A +SW+P S          Y +Q        W    
Sbjct: 433 ELLVRGP-PGPPGIVIVEDITESTATLSWSPASDN--HSPISSYNLQARSPFSLGWQTVK 489

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGT 506
              +I E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T
Sbjct: 490 ---TIPEIITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKT 544

Query: 507 VQSLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISD 561
             +  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+
Sbjct: 545 APTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSE 599

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPN 616
            +    +   + P T + + +  Y   GDG  S+ +        P   P +V+    + +
Sbjct: 600 ASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVS 659

Query: 617 NLVISWTAMPE 627
            ++++W  + E
Sbjct: 660 EILVAWKHIKE 670



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 153/650 (23%), Positives = 241/650 (37%), Gaps = 76/650 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + A
Sbjct: 22  NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 81

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I N++  D G Y 
Sbjct: 82  AKGTTVKMECFALGNPVPTITWMKVNG----YIPSKARLRKSQAVLEIPNVQLDDAGLYE 137

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V  + P   E   D     G  +   C+  G P+P   W+ N 
Sbjct: 138 CRAENSRGKNSFRGQLQVYTY-PHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG 196

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITDQ 313
             L       +  G L I +V  +D+G Y C A NK G    S  L +        +   
Sbjct: 197 VSLLPQNRIEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIFASAELKILASAPTFALNQM 256

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +   +   Q    +C     P  K +I W +G + +      R     D SL +  +S+
Sbjct: 257 KKTIIITKDQEVIIQCKPQGSP--KPTISWKKGDKAV--RENKRIAILPDGSLRILNASK 312

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR- 432
            D G+Y C+ +      E  A+++V+ P          ++   +  V++   +   SL  
Sbjct: 313 SDEGKYVCQGENVFGSAETIASVSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 372

Query: 433 -----------------GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
                            GHF   + Q       +  IR +++         V     +  
Sbjct: 373 TFYWTLKGQPIDFEKEGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQTTADSVS 429

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
           + A +L       GPP          G PG V   +   +  S   L W      +  + 
Sbjct: 430 DEAELLV-----RGPP----------GPPGIVIVED---ITESTATLSWSPASDNHSPIS 471

Query: 536 GYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y ++ +S     +G   ++ +P I      SA    L P  +Y   +      G G  S
Sbjct: 472 SYNLQARS--PFSLGWQTVKTIPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPS 529

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P NV GR    + LVI+W  + E   N   F Y + +R + T  
Sbjct: 530 TPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT-R 588

Query: 649 AWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
            W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V
Sbjct: 589 GWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVV 636



 Score = 46.6 bits (109), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  ++++V + C   G+P P   W K    +  + RI+    G SL I +   SD+
Sbjct: 257 KKTIIITKDQEVIIQCKPQGSPKPTISWKKGDKAVRENKRIAILPDG-SLRILNASKSDE 315

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI-- 157
           G Y C+  N  G A++ +  +SV       + P+       E++   CKA      ++  
Sbjct: 316 GKYVCQGENVFGSAETIA-SVSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 374

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          + R +     + I N+     G YGC
Sbjct: 375 YWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILLMHAGRYGC 419


>gi|148228227|ref|NP_001085050.1| contactin 4 precursor [Xenopus laevis]
 gi|47940323|gb|AAH72368.1| MGC84491 protein [Xenopus laevis]
          Length = 1028

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 164/611 (26%), Positives = 264/611 (43%), Gaps = 54/611 (8%)

Query: 47  RNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           +   V+L C   G P+P   W + DG PI  S ++ +      L I + +  D G Y C 
Sbjct: 240 KGSTVKLECFALGNPVPTITWRRADGKPI--SRKVRRHRSSGVLEIPNFQQEDAGPYECV 297

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             N  G+       L+  A P +  +    + A EE + +ECKASG P+P   W+ NG+ 
Sbjct: 298 AENTRGKNMVRG-QLTYFAPPSWVQKINDAHIAIEENILWECKASGRPKPSYTWLKNGQR 356

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +       R ++    +TI ++  SD+G Y C A N  G +Y    + V+A  P+ ++  
Sbjct: 357 LQS---KGRLQIDHGSLTITSVNISDSGMYQCLAENKHGTIYSSAELRVIAVGPDFSKGF 413

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADS 282
               T+   G +V++ C+   +PKP   W   ++ L    R +IL+ G LKI+++  AD+
Sbjct: 414 VKRVTLGKVGGSVLIECKPKASPKPSTTWKKGKELLKESPRISILDDGTLKISNLTKADA 473

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +S  
Sbjct: 474 GSYTCTASNHFGTASSTGTLVVKDPTQVLVPPSSMDVTVGESIVLPCQVSHDHSLDISFS 533

Query: 343 WLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           W+   + IDF+ +         Q +   L +       +G+Y C   T +D + A A L 
Sbjct: 534 WVFNGQLIDFQKDGEHFERVGGQDSAGDLMIRSIQLKHAGKYICLVHTSVDKLSAGADLI 593

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEK----DGEGS 451
           V+ P   P   T ++VI    A +SW P     +  H     Y VQ  T          +
Sbjct: 594 VRGPPGPPDALT-VEVIAETTAQLSWMP----GVDNHSPIIMYSVQARTPFSVGWQAVST 648

Query: 452 IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTPEG 502
           + E++   G+S ++ V+   P  +   RV+A N    G PS         + +  VTP  
Sbjct: 649 VPEVV--DGKSFSSTVNGLSPWVEYEFRVIAINEIGIGEPSPPSDRRRTKDALPEVTPAN 706

Query: 503 VPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560
           V G   S            + W  V  E  NG   GY + ++          ++ +   +
Sbjct: 707 VSGGGGS-------KGELVITWEPVPEELQNGGGFGYVVAFRPFGTIS---WMQTVVASA 756

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTP 615
           D +    +   L P + Y + +  Y   G+G  S+          P + P  V  R  T 
Sbjct: 757 DSSRYVYRNESLPPFSPYEVKVGVYNNKGEGPFSQLTVVYSAEEEPGRAPAGVFSRSLTA 816

Query: 616 NNLVISWTAMP 626
            ++ +SW A+P
Sbjct: 817 WDIEVSWIAVP 827



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 171/647 (26%), Positives = 259/647 (40%), Gaps = 69/647 (10%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSY--SIDLSVLA-------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N +   +    S  L++          P   V  PE +++
Sbjct: 179 NLYIAKVEPSDAGNYTCVVTNIITNTRELGPSTPLTLRTDGVMGEYEPKIEVHFPESVSS 238

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   +GKPIS+     RR      + I N ++ D G Y 
Sbjct: 239 AKGSTVKLECFALGNPVPTITWRRADGKPISR---KVRRHRSSGVLEIPNFQQEDAGPYE 295

Query: 197 CNATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           C A N+ G   K++    L +   P   +   D +    + ++  C+  G PKP   W+ 
Sbjct: 296 CVAENTRG---KNMVRGQLTYFAPPSWVQKINDAHIAIEENILWECKASGRPKPSYTWLK 352

Query: 255 NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
           N + L       ++ G L IT V  +DSG Y C A NK GT   S  L V     I   P
Sbjct: 353 NGQRLQSKGRLQIDHGSLTITSVNISDSGMYQCLAENKHGTIYSSAELRV-----IAVGP 407

Query: 315 EDYE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
           +  +         + G S    C   + P  K S  W +G E +  +  PR    +D +L
Sbjct: 408 DFSKGFVKRVTLGKVGGSVLIECKPKASP--KPSTTWKKGKELL--KESPRISILDDGTL 463

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPV 426
            ++  ++ D+G YTC A        +  TL V+ P +     + + V   +  V+     
Sbjct: 464 KISNLTKADAGSYTCTASNHFGTASSTGTLVVKDPTQVLVPPSSMDVTVGESIVLPCQVS 523

Query: 427 SPQSLRGHFRGYKVQTWT--------EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFA 478
              SL   F      +W         +KDGE   R    +          +   A K   
Sbjct: 524 HDHSLDISF------SWVFNGQLIDFQKDGEHFERVGGQDSAGDLMIRSIQLKHAGKYIC 577

Query: 479 RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
            V       +     I+      G PG   +L    +  +   L W+     +  ++ Y 
Sbjct: 578 LVHTSVDKLSAGADLIV-----RGPPGPPDALTVEVIAETTAQLSWMPGVDNHSPIIMYS 632

Query: 539 IKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES--- 594
           +  Q+     VG   +  +P + D  + S+ + GL P  +Y   +    + G G  S   
Sbjct: 633 V--QARTPFSVGWQAVSTVPEVVDGKSFSSTVNGLSPWVEYEFRVIAINEIGIGEPSPPS 690

Query: 595 ---KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWN 651
              +    +P   P NV G G +   LVI+W  +PE   N   F Y + +R   T  +W 
Sbjct: 691 DRRRTKDALPEVTPANVSGGGGSKGELVITWEPVPEELQNGGGFGYVVAFRPFGT-ISWM 749

Query: 652 QDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
           Q  V     S  V  N+  P F PYE+K V  +  K GEG   +L V
Sbjct: 750 QTVVASADSSRYVYRNESLPPFSPYEVK-VGVYNNK-GEGPFSQLTV 794



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 115/292 (39%), Gaps = 36/292 (12%)

Query: 119 DLSVLAAPYFTVEPEFIN---AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D   L  P F  EP  IN    +E+ T+   C   G P+P + W  NG  + +A     R
Sbjct: 18  DELTLQGPVFAQEPTNINFPLDSEDRTLRLVCDVQGHPKPVVRWRVNGTLMDEAQDYRYR 77

Query: 176 KVGPNRITIENLRKSDTGNYGCNATNSLGYVY-KDVYVNVLAHAPEITEAPKDEYTVDGK 234
            +  + I     R  D G + C ATNSLG +  ++ YV         T         +G+
Sbjct: 78  VLDRSLIIASPDRNRDVGTFQCEATNSLGTILSREAYVQFSYLDSFQTRTRSTVSVREGQ 137

Query: 235 TVVLTCRVFGAPKPE----VNWIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYT 286
            +VL C   G P         WI N+     +    R+    TG+L I  V  +D+G YT
Sbjct: 138 GMVLLC---GPPAHSGELVYAWIFNEYPPFVQQDNRRFVSQVTGNLYIAKVEPSDAGNYT 194

Query: 287 CFARN------KLG-----TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           C   N      +LG     T +  G +   E       PE      G +    C A+ +P
Sbjct: 195 CVVTNIITNTRELGPSTPLTLRTDGVMGEYEPKIEVHFPESVSSAKGSTVKLECFALGNP 254

Query: 336 SLKLSIVWLRGS-EPIDFESEPRFVQSNDYS--LTVTKSSELDSGQYTCRAQ 384
               +I W R   +PI      R V+ +  S  L +    + D+G Y C A+
Sbjct: 255 V--PTITWRRADGKPIS-----RKVRRHRSSGVLEIPNFQQEDAGPYECVAE 299


>gi|47218961|emb|CAF98159.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 529

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/395 (30%), Positives = 187/395 (47%), Gaps = 23/395 (5%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTI--WSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           K    L   +  L C+     +   +  W +DG  ++          G+ L+I     SD
Sbjct: 60  KDTTVLAGIQATLECVANARAVENLVVSWKRDGRHLH---------SGRRLVIPTPSSSD 110

Query: 99  QGSYTCE--VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAE-EETVTFECKASGLPEP 155
            GSY CE  +SN  G     +  L+V+  P   ++P+    AE + TV   C+A+G+P+P
Sbjct: 111 TGSYVCEASLSNSTGRPAEAAAHLTVIEPPSLRIQPQRETFAELDRTVDIPCQATGVPQP 170

Query: 156 EIHWVHNGKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
            + W  +  P+S+   NPR K+     +T+  ++  D G + C A N+ G       + V
Sbjct: 171 RVEWFKDAVPVSKLA-NPRYKITAATGLTVRRVQPGDGGIFQCLARNAAGETQASTQLLV 229

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILET 269
              AP  T  P D+   DG   + TC+  GAPKP + W    + L  G     R+T+L++
Sbjct: 230 SGAAPTFTSPPSDQTVTDGNRALFTCQTSGAPKPAITWRKGLQVLASGSVQVPRFTLLQS 289

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I  ++F DSG YTC A N  G+   + +LTV + T I+  P D  V  G +AT  C
Sbjct: 290 GGLEIQPISFQDSGAYTCIASNSEGSINATATLTVMKRTVISVPPVDQRVIKGTTATLNC 349

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
           NA  DP + +S  W RG +P+   S  R V     +LT+ ++   D G YTC   +    
Sbjct: 350 NATHDPRVTISFRWERGDKPVLPTSGGR-VSVRQGALTIGQTWSGDIGDYTCTVTSAAGN 408

Query: 390 IEAQATLTVQVPLEAPSNFTL-IQVIDAKKAVVSW 423
               A L V     +P + T  +   D++  ++SW
Sbjct: 409 DSHTARLEVIELPHSPRSLTARLNDSDSRSVLLSW 443



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 141/332 (42%), Gaps = 32/332 (9%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI----NPSDRISQGNYGKS 88
           P  +   +++  A  ++ V++ C   G P P+  W KD VP+    NP  +I+       
Sbjct: 140 PSLRIQPQRETFAELDRTVDIPCQATGVPQPRVEWFKDAVPVSKLANPRYKITAAT---G 196

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECK 148
           L ++ V+  D G + C   N  GE ++ +  L   AAP FT  P      +     F C+
Sbjct: 197 LTVRRVQPGDGGIFQCLARNAAGETQASTQLLVSGAAPTFTSPPSDQTVTDGNRALFTCQ 256

Query: 149 ASGLPEPEIHWVHNGKPISQAPPN-PR-RKVGPNRITIENLRKSDTGNYGCNATNSLGYV 206
            SG P+P I W    + ++      PR   +    + I+ +   D+G Y C A+NS G +
Sbjct: 257 TSGAPKPAITWRKGLQVLASGSVQVPRFTLLQSGGLEIQPISFQDSGAYTCIASNSEGSI 316

Query: 207 YKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVN--WIHNQKEL---TG 261
                + V+     I+  P D+  + G T  L C     P+  ++  W    K +   +G
Sbjct: 317 NATATLTVMKRT-VISVPPVDQRVIKGTTATLNCNATHDPRVTISFRWERGDKPVLPTSG 375

Query: 262 GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA 321
           GR ++ + G L I      D G+YTC   +  G    +  L V E  H           +
Sbjct: 376 GRVSVRQ-GALTIGQTWSGDIGDYTCTVTSAAGNDSHTARLEVIELPH-----------S 423

Query: 322 GQSATFRCNAVSDPSLKLSIVWLR---GSEPI 350
            +S T R N     S+ LS  WLR   G+ P+
Sbjct: 424 PRSLTARLNDSDSRSVLLS--WLRPFDGNSPL 453


>gi|269785101|ref|NP_001161506.1| contactin-like protein precursor [Saccoglossus kowalevskii]
 gi|268053975|gb|ACY92474.1| axonin [Saccoglossus kowalevskii]
          Length = 1048

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 190/765 (24%), Positives = 316/765 (41%), Gaps = 103/765 (13%)

Query: 10  KIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK 69
           +I  +I ++V+    +  Q   +PK  +  + + V L    V L C F G P+P+  W +
Sbjct: 213 RISPQISVSVLTNNFAGFQ---SPKVSHAVQDQTV-LEGDNVRLECFFRGNPVPRLSWER 268

Query: 70  -----DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKS---YSID-- 119
                  +P       S  N  + LI+++++  D G+Y C   N      S   YS    
Sbjct: 269 VAPFGQAIP----SSASFDNQNQVLILRNIQEEDGGNYQCIAENSPDNQNSRPTYSRSTG 324

Query: 120 -LSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
            + V   P +  + E + A    + TFEC+A+G       W  NG+   Q     R    
Sbjct: 325 TIDVRVPPKWIKQLEDLEADIRGSATFECEATGTEPITYKWYRNGE---QFTTRTRHSFS 381

Query: 179 PN--RITIENLRKSDTGNYGCNATNSLGYVYKDVY----VNVLAHAPEITEAP--KDEYT 230
            N  R+TI +L+ +D+  Y C A N+L    + +Y    + VLA AP   + P  +++  
Sbjct: 382 NNFKRLTINSLQDADSAMYQCKAANTLLDKERAIYSTGQLTVLAIAPSFADTPLLQNQPA 441

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT---GGRYTILETGDLKITDVAFADSGEYTC 287
                + + C    APKP+  W+HN + ++   GG YTIL+ G L I +V  +D G+YTC
Sbjct: 442 ARNGNITIECNPEAAPKPDFTWLHNNRPISITNGGHYTILDNGHLFIQNVQDSDGGKYTC 501

Query: 288 FARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS 347
            ARN +G  Q  G L +++ T IT  P    +E G  AT +C A +DP L L+ +WL   
Sbjct: 502 IARNYIGEDQSEGRLVIRDGTVITQWPLAMSIEVGDDATLKCRATADPVLDLTYIWLLDG 561

Query: 348 EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSN 407
             ID   +  + +  D +L +  +    SG YTC A T +D +   A + ++     P+ 
Sbjct: 562 VQIDVLDDSHYARLRDGNLEIIDAELRQSGVYTCTAHTTIDEVSKSAEVIIKGAPGPPAG 621

Query: 408 FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSI-RELIVNKGESTTTE 466
                 I      + W+     S     + Y VQ+ T+++ E  I RE I +   S    
Sbjct: 622 VRASD-ITTNSCQLRWS--EGFSNNDPIKTYTVQSRTKEEPEWIIEREGIPDLSAS---- 674

Query: 467 VDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKW 524
           ++   P S    RV A N    G PS     + T E  P    +++      +    + W
Sbjct: 675 LNSLSPWSNYQFRVSAVNSYGRGEPSLPSPEYSTHEDKPYHEPRNVGGGGGKTGDLRITW 734

Query: 525 --VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY----ISDPTTTSAKLAGLEPSTKY 578
             +  +  N   +GY + ++            R  Y    ++D       + G+    +Y
Sbjct: 735 DPLSRQDQNAPGLGYYVYWKKAN--------SREEYSKGVVNDEAVGVYTVKGVPTYVQY 786

Query: 579 RIHLAGYTKAGDGAESKY-LFY----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAP 633
            + +  +   GDG  S     Y     P + PDNVE   ++ + + ++W +   I  N  
Sbjct: 787 DVRVGVFNAKGDGPNSTISTIYSHESAPSEAPDNVEAEATSGSTIKVTWDS---ISTNNL 843

Query: 634 HFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRE 693
             K R                                   Y++K    W+  D E +   
Sbjct: 844 KGKLR----------------------------------GYKLKY---WSSDDSEATA-S 865

Query: 694 LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
            +   G +T  E+     ++    +VLA++G  NGP S+ +  VT
Sbjct: 866 TVSTPGVTTRYEIQNLDYSTVYNIKVLAYSGGGNGPASDNVVRVT 910



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 93/386 (24%), Positives = 149/386 (38%), Gaps = 74/386 (19%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPIN--PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           V + C   G P P   W K+ V +N    +R++    GK L I     SD GS+ C  SN
Sbjct: 48  VSIECEADGYPRPTYKWKKNDVDVNILADNRLTLME-GK-LTIAEPRQSDAGSFQCFASN 105

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFE-------CKA-SGLPEPEIHWV 160
                  Y + LS +A   F     F    +   V  E       C A    P    +WV
Sbjct: 106 ------DYGVVLSQIATLSFGFVDPFPRQGQSPKVATEGNGFMLSCNAPDAYPGLSFYWV 159

Query: 161 HNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSL---------GYVYKDV 210
            + +  +    + R  +  N  +    + + D G+Y C   N L         G +   +
Sbjct: 160 KDIE-FNFVRESERLMIASNGNMYFAKVDQGDQGDYSCIVKNILDAASGAGQDGRISPQI 218

Query: 211 YVNVLAH------APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNW------------ 252
            V+VL +      +P+++ A +D+  ++G  V L C   G P P ++W            
Sbjct: 219 SVSVLTNNFAGFQSPKVSHAVQDQTVLEGDNVRLECFFRGNPVPRLSWERVAPFGQAIPS 278

Query: 253 ---IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARN-------KLGTAQGSGSL 302
                NQ ++            L + ++   D G Y C A N       +   ++ +G++
Sbjct: 279 SASFDNQNQV------------LILRNIQEEDGGNYQCIAENSPDNQNSRPTYSRSTGTI 326

Query: 303 TVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
            V+       Q ED E +   SATF C A    +  ++  W R  E   F +  R   SN
Sbjct: 327 DVRVPPKWIKQLEDLEADIRGSATFECEATG--TEPITYKWYRNGE--QFTTRTRHSFSN 382

Query: 363 DYS-LTVTKSSELDSGQYTCRAQTEL 387
           ++  LT+    + DS  Y C+A   L
Sbjct: 383 NFKRLTINSLQDADSAMYQCKAANTL 408



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 28/209 (13%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
             P EAP N    +        V+W+ +S  +L+G  RGYK++ W+  D E +    +   
Sbjct: 813  APSEAPDNVEA-EATSGSTIKVTWDSISTNNLKGKLRGYKLKYWSSDDSEATA-STVSTP 870

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT---------PEGVPGTVQSL 510
            G +T  E+     ++    +VLA++G  NGP S+ +  VT         PE V   V S 
Sbjct: 871  GVTTRYEIQNLDYSTVYNIKVLAYSGGGNGPASDNVVRVTTLKSAPQDAPENVKAAVSSW 930

Query: 511  EAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ-----SVKGTKVGPLLERLPYISDPTTT 565
             +I L +      +   E+P   L GYKI Y          TKV         I    T 
Sbjct: 931  SSI-LVTWDKITSYNDEEEP---LEGYKILYYLDGRFERDATKVD--------IKGADTI 978

Query: 566  SAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
               ++GL+P   Y + + GY++ GDG  S
Sbjct: 979  KGTISGLQPGATYLLQVQGYSEGGDGVTS 1007



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 122/312 (39%), Gaps = 42/312 (13%)

Query: 125 APYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P+  VEP+   F   +   +V+ EC+A G P P   W  N   ++    N R  +   +
Sbjct: 27  GPHIIVEPKDTIFNADSNLPSVSIECEADGYPRPTYKWKKNDVDVNILADN-RLTLMEGK 85

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA---PEITEAPKDEYTVDGKTVVL 238
           +TI   R+SD G++ C A+N  G V   +           P   ++PK     +G   +L
Sbjct: 86  LTIAEPRQSDAGSFQCFASNDYGVVLSQIATLSFGFVDPFPRQGQSPK--VATEGNGFML 143

Query: 239 TCRVFGA-PKPEVNWIHNQK---ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLG 294
           +C    A P     W+ + +        R  I   G++    V   D G+Y+C  +N L 
Sbjct: 144 SCNAPDAYPGLSFYWVKDIEFNFVRESERLMIASNGNMYFAKVDQGDQGDYSCIVKNILD 203

Query: 295 TAQGSG-------SLTVKEHTH---------ITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            A G+G        ++V   T+         ++   +D  V  G +    C    +P  +
Sbjct: 204 AASGAGQDGRISPQISVSVLTNNFAGFQSPKVSHAVQDQTVLEGDNVRLECFFRGNPVPR 263

Query: 339 LSIVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD-------F 389
           LS  W R + P      S   F   N   L +    E D G Y C A+   D       +
Sbjct: 264 LS--WERVA-PFGQAIPSSASFDNQNQV-LILRNIQEEDGGNYQCIAENSPDNQNSRPTY 319

Query: 390 IEAQATLTVQVP 401
             +  T+ V+VP
Sbjct: 320 SRSTGTIDVRVP 331


>gi|291384023|ref|XP_002708477.1| PREDICTED: contactin 5 [Oryctolagus cuniculus]
          Length = 1108

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 159/609 (26%), Positives = 261/609 (42%), Gaps = 45/609 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           A +   V++ C   G P+P   W K    I    R+ +      L I +V+  D G Y C
Sbjct: 321 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRKSQ--AVLEIPNVQLDDAGIYEC 378

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N  G+  S+   L V   P++  +           + +ECKA+G P P   W+ NG 
Sbjct: 379 RAENARGK-NSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTFRWLKNGA 437

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT-- 222
           P+    P  R ++    + I ++ +SD G Y C A N  G +Y    + +LA AP     
Sbjct: 438 PLL---PQSRVEMVNGVLMIHSVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFAPN 494

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           +  K      G+ V + C+  G+PKP ++W    K +    R  IL  G+L+I + + +D
Sbjct: 495 QLKKTIIVTKGREVEIECKPQGSPKPAISWKKGDKAVRENKRIAILPDGNLRILNASKSD 554

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+Y C   N  G+A+   S++VKE T I   P+  E+  G+S    C A+ D SL ++ 
Sbjct: 555 EGKYVCRGENIFGSAEIVASVSVKEPTRIELTPKRIELTVGESIVLNCKAIHDASLDVNF 614

Query: 342 VWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W    +PI+FE E         Q++   L +     + +G+Y CR QT  D +  +A L
Sbjct: 615 FWTLKGQPIEFEKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAEL 674

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKDGE 449
            V+ P   P    +++ I    A +SW+P +          Y +Q        W      
Sbjct: 675 LVRGP-PGPPGVVIVEEITESTATLSWSPAADN--HSPVTSYNLQARSPFSLGWQTVK-- 729

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQ 508
            ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T  
Sbjct: 730 -TVPEIITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAP 786

Query: 509 SLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISDPT 563
           +  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+ +
Sbjct: 787 TNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSEAS 841

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNL 618
               +   + P T + + +  Y   GDG  S+ +        P   P +V+    + + +
Sbjct: 842 KFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSMSMSEI 901

Query: 619 VISWTAMPE 627
           +++W  + E
Sbjct: 902 LVAWKHIKE 910



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 157/651 (24%), Positives = 242/651 (37%), Gaps = 78/651 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + A
Sbjct: 262 NLYISKVQASDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 321

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I N++  D G Y 
Sbjct: 322 AKGTTVKMECFALGNPVPTITWMKVNG----YIPSKSRLRKSQAVLEIPNVQLDDAGIYE 377

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A N+ G       + V  + P   E   D     G  +   C+  G P+P   W+ N 
Sbjct: 378 CRAENARGKNSFRGQLQVYTY-PHWVEKLNDTQLDSGSPLRWECKATGKPRPTFRWLKNG 436

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
             L       +  G L I  V  +D+G Y C A NK G    S  L +      T  P  
Sbjct: 437 APLLPQSRVEMVNGVLMIHSVNQSDAGMYQCLAENKYGAIYASAELKILASAP-TFAPNQ 495

Query: 317 YE----VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
            +    V  G+     C     P  K +I W +G + +      R     D +L +  +S
Sbjct: 496 LKKTIIVTKGREVEIECKPQGSP--KPAISWKKGDKAV--RENKRIAILPDGNLRILNAS 551

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           + D G+Y CR +      E  A+++V+ P         I++   +  V++   +   SL 
Sbjct: 552 KSDEGKYVCRGENIFGSAEIVASVSVKEPTRIELTPKRIELTVGESIVLNCKAIHDASLD 611

Query: 433 ------------------GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
                             GHF   + Q       +  IR +++         V     + 
Sbjct: 612 VNFFWTLKGQPIEFEKEGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQTTADSV 668

Query: 475 KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
            + A +L       GPP          G PG V   E   +  S   L W      +  +
Sbjct: 669 SDEAELLV-----RGPP----------GPPGVVIVEE---ITESTATLSWSPAADNHSPV 710

Query: 535 MGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
             Y ++ +S     +G   ++ +P I      SA    L P  +Y   +      G G  
Sbjct: 711 TSYNLQARS--PFSLGWQTVKTVPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDP 768

Query: 594 S------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTG 647
           S      +    VP   P NV GR    + LVI+W  + E   N   F Y + +R + T 
Sbjct: 769 STPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT- 827

Query: 648 EAWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
             W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V
Sbjct: 828 RGWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVV 876



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 95/395 (24%), Positives = 146/395 (36%), Gaps = 35/395 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           KKV L C   G P+P   W ++G  I+  SD       G  +I    E  D G Y C  +
Sbjct: 126 KKVALNCESRGNPVPSYRWLRNGTEIDLESDYRYSLIEGTFIISNPSEAKDAGHYQCLAT 185

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N  G   S    L       F+      ++  E + V   C      PE    WV N  P
Sbjct: 186 NTFGSILSREAILQFAYLGNFSGRTRSAVSVREGQGVVLLCSPPPHSPEIIYSWVFNEFP 245

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
            S    + RR +      + I  ++ SD G+Y C   N++                  V 
Sbjct: 246 -SFVAEDSRRFISQETGNLYISKVQASDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVM 304

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            +    +  H P    A K      G TV + C   G P P + W+     +        
Sbjct: 305 GEYEPKIEVHFPFTVTAAK------GTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRK 358

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               L+I +V   D+G Y C A N  G     G L V  + H  ++  D ++++G    +
Sbjct: 359 SQAVLEIPNVQLDDAGIYECRAENARGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRW 418

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  + +  WL+   P+  +S    V      L +   ++ D+G Y C A+ + 
Sbjct: 419 ECKATGKP--RPTFRWLKNGAPLLPQSRVEMVNG---VLMIHSVNQSDAGMYQCLAENKY 473

Query: 388 DFIEAQATLTV--QVPLEAPSNFTLIQVIDAKKAV 420
             I A A L +    P  AP+      ++   + V
Sbjct: 474 GAIYASAELKILASAPTFAPNQLKKTIIVTKGREV 508



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 125/297 (42%), Gaps = 35/297 (11%)

Query: 113 AKSYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
           + ++  D SV   P F  EP+   F   ++E+ V   C++ G P P   W+ NG  I   
Sbjct: 95  SDAFKQDESVDYGPVFVQEPDDIIFPTDSDEKKVALNCESRGNPVPSYRWLRNGTEI-DL 153

Query: 170 PPNPRRKVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
             + R  +      I N  ++ D G+Y C ATN+ G +     +   A+    +   +  
Sbjct: 154 ESDYRYSLIEGTFIISNPSEAKDAGHYQCLATNTFGSILSREAILQFAYLGNFSGRTRSA 213

Query: 229 YTV-DGKTVVLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVA 278
            +V +G+ VVL C    +P P       +W+ N+          R+   ETG+L I+ V 
Sbjct: 214 VSVREGQGVVLLC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQ 269

Query: 279 FADSGEYTCFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATF 327
            +D G Y C  +N +  A+       LT++    + +     EV          G +   
Sbjct: 270 ASDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKM 329

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
            C A+ +P    +I W++ +  I  +S  R  Q+    L +      D+G Y CRA+
Sbjct: 330 ECFALGNPV--PTITWMKVNGYIPSKSRLRKSQA---VLEIPNVQLDDAGIYECRAE 381



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 24  ISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS-- 81
           I AS    AP Q    +K  +  + ++VE+ C   G+P P   W K    +  + RI+  
Sbjct: 484 ILASAPTFAPNQ---LKKTIIVTKGREVEIECKPQGSPKPAISWKKGDKAVRENKRIAIL 540

Query: 82  -QGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEE 140
             GN    L I +   SD+G Y C   N  G A+  +  +SV       + P+ I     
Sbjct: 541 PDGN----LRILNASKSDEGKYVCRGENIFGSAEIVA-SVSVKEPTRIELTPKRIELTVG 595

Query: 141 ETVTFECKASGLPEPEIH--WVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTG 193
           E++   CKA      +++  W   G+PI          + R +     + I N+     G
Sbjct: 596 ESIVLNCKAIHDASLDVNFFWTLKGQPIEFEKEGGHFESIRAQASSADLMIRNILLMHAG 655

Query: 194 NYGC 197
            YGC
Sbjct: 656 RYGC 659


>gi|118097058|ref|XP_414435.2| PREDICTED: contactin-4 [Gallus gallus]
          Length = 1029

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 173/635 (27%), Positives = 270/635 (42%), Gaps = 58/635 (9%)

Query: 47  RNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           +   V+L C   G P+P   W + DG  I    R  + N    L I + +  D G Y C 
Sbjct: 241 KGTAVKLECFALGNPVPTISWRRADGKQIPRKARRHRSN--GLLEIPNFQQEDAGLYECV 298

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             N  G+  +    L+  A P +  +   ++AA EE V +EC ASG P+P   W+ +G+P
Sbjct: 299 AENVRGKNVARG-QLTFYAQPNWIQKISDVHAAIEENVFWECHASGRPKPSYRWLKDGEP 357

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +    P  R ++    +TI N+  SD G Y C A N  G ++    ++V+A  P+ ++  
Sbjct: 358 LL---PQGRVQIEQGSLTIRNVSLSDAGMYQCVAENRHGTIFASAELSVIAVGPDFSKTL 414

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADS 282
             + T+   G  V++ C+   +P+P  +W   +  L    R T+L+ G L+I +V  +D+
Sbjct: 415 LKKLTLVKVGGEVIIECKPKASPRPTYSWKKGKDILRENERITVLDDGSLRIVNVTKSDT 474

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A N  GTA  +GSL VK+ T +   P   +V  G+S    C    D SL +   
Sbjct: 475 GSYTCVATNHFGTASSTGSLVVKDPTRVMVSPFSMDVTVGESIVLPCQVSHDHSLDIVFT 534

Query: 343 WLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           W      IDFE +         Q +   L +       +G+Y C  QT +D + A A L 
Sbjct: 535 WSFNGHLIDFEKDGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKLSAAADLI 594

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGE 449
           V+ P   P + T+ ++ D   A +SW P     SP ++      Y VQ  T         
Sbjct: 595 VRGPPGPPEDVTIDEITDT-TAQLSWRPGADNHSPITM------YVVQARTPFSVGWQAV 647

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTP 500
            ++ E+I   G++ T  V    P  +   RV+A N    G PS         E +  VTP
Sbjct: 648 STVPEVI--DGKTFTATVVGLNPWVEYEFRVVAANLIGIGEPSRPSENRRTEEALPEVTP 705

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
             V G   S        S   + W  V  E  NG   GY + ++          ++ +  
Sbjct: 706 ANVSGGGGS-------KSELVITWETVPEELQNGGGFGYVVAFRPFGTIS---WMQTVVA 755

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGS 613
             D +    +   L P + Y + +  Y   G+G+ S           P + P  V  R  
Sbjct: 756 SPDASRYVFRNESLPPFSPYEVKVGVYNNKGEGSFSPVTVVYSAEEEPTRAPITVLARSL 815

Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
           +  ++ ISW    E +H      Y +   RH+  E
Sbjct: 816 SATDIEISWAPPRENQHKGRIQGYEVRCWRHDEKE 850



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 173/663 (26%), Positives = 257/663 (38%), Gaps = 101/663 (15%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V  ++       ++           P   V+ PE + +
Sbjct: 180 NLYIAKVEASDVGNYTCVVTNTVTNSRVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPS 239

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+   V  EC A G P P I W   +GK   Q P   RR      + I N ++ D G Y 
Sbjct: 240 AKGTAVKLECFALGNPVPTISWRRADGK---QIPRKARRHRSNGLLEIPNFQQEDAGLYE 296

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A N  G       +   A  P   +   D +    + V   C   G PKP   W+ + 
Sbjct: 297 CVAENVRGKNVARGQLTFYAQ-PNWIQKISDVHAAIEENVFWECHASGRPKPSYRWLKDG 355

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           + L       +E G L I +V+ +D+G Y C A N+ GT   S  L+V     I   P+ 
Sbjct: 356 EPLLPQGRVQIEQGSLTIRNVSLSDAGMYQCVAENRHGTIFASAELSV-----IAVGPDF 410

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
            +        V+ G      C   + P    S  W +G + I  E+E R    +D SL +
Sbjct: 411 SKTLLKKLTLVKVGGEVIIECKPKASPRPTYS--WKKGKD-ILRENE-RITVLDDGSLRI 466

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV------- 421
              ++ D+G YTC A        +  +L V+ P     +   + V   +  V+       
Sbjct: 467 VNVTKSDTGSYTCVATNHFGTASSTGSLVVKDPTRVMVSPFSMDVTVGESIVLPCQVSHD 526

Query: 422 -SWNPVSPQSLRGHFRGYKVQTWTEKD--------GEGSIRELIVNKGE---------ST 463
            S + V   S  GH   +      EKD        G+ S  +L++   +           
Sbjct: 527 HSLDIVFTWSFNGHLIDF------EKDGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMV 580

Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS--SAFY 521
            T VDK   A+    R         GPP +    VT + +  T   L   P     S   
Sbjct: 581 QTSVDKLSAAADLIVR------GPPGPPED----VTIDEITDTTAQLSWRPGADNHSPIT 630

Query: 522 LKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIH 581
           +  V+   P      + + +Q+V           +P + D  T +A + GL P  +Y   
Sbjct: 631 MYVVQARTP------FSVGWQAVS---------TVPEVIDGKTFTATVVGLNPWVEYEFR 675

Query: 582 LAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHF 635
           +      G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F
Sbjct: 676 VVAANLIGIGEPSRPSENRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGGGF 735

Query: 636 KYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRE 693
            Y + +R   T  +W Q  V     S  V  N+  P F PYE+K V  +  K GEGS   
Sbjct: 736 GYVVAFRPFGT-ISWMQTVVASPDASRYVFRNESLPPFSPYEVK-VGVYNNK-GEGSFSP 792

Query: 694 LIV 696
           + V
Sbjct: 793 VTV 795



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 142/369 (38%), Gaps = 28/369 (7%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  I+   D       G  LI       D G+Y C  +
Sbjct: 44  KKVKLNCEVKGNPRPTIGWKLNGTNIDIGMDYRYSMVEGNLLINNPNRTQDTGTYQCVAT 103

Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVHN 162
           N  G   S    L       F T     ++  + + +   C   G P    E    W+ N
Sbjct: 104 NPFGRIISREAKLQFAYLENFKTRVRSTVSVRQGQGMVLLC---GPPPHSGELTYAWIFN 160

Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN- 213
             P S    + RR V      + I  +  SD GNY C  TN+      LG     +  N 
Sbjct: 161 EYP-SFVHQDNRRFVSQETGNLYIAKVEASDVGNYTCVVTNTVTNSRVLGPPTPLILRND 219

Query: 214 --VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILET 269
             +  + P+I  + P+   +  G  V L C   G P P ++W   + K++          
Sbjct: 220 GVMGEYEPKIEVQFPETVPSAKGTAVKLECFALGNPVPTISWRRADGKQIPRKARRHRSN 279

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I +    D+G Y C A N  G     G LT     +   +  D      ++  + C
Sbjct: 280 GLLEIPNFQQEDAGLYECVAENVRGKNVARGQLTFYAQPNWIQKISDVHAAIEENVFWEC 339

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
           +A   P  K S  WL+  EP+  +     VQ    SLT+   S  D+G Y C A+     
Sbjct: 340 HASGRP--KPSYRWLKDGEPLLPQGR---VQIEQGSLTIRNVSLSDAGMYQCVAENRHGT 394

Query: 390 IEAQATLTV 398
           I A A L+V
Sbjct: 395 IFASAELSV 403



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 107/292 (36%), Gaps = 36/292 (12%)

Query: 119 DLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D ++L  P F  EP    F   +EE+ V   C+  G P P I W  NG  I         
Sbjct: 19  DDNMLHGPVFLQEPSSVIFPLDSEEKKVKLNCEVKGNPRPTIGWKLNGTNIDIGMDYRYS 78

Query: 176 KVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGK 234
            V  N +     R  DTG Y C ATN  G +         A+        +   +V  G+
Sbjct: 79  MVEGNLLINNPNRTQDTGTYQCVATNPFGRIISREAKLQFAYLENFKTRVRSTVSVRQGQ 138

Query: 235 TVVLTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEY 285
            +VL C     P P        WI N+          R+   ETG+L I  V  +D G Y
Sbjct: 139 GMVLLC----GPPPHSGELTYAWIFNEYPSFVHQDNRRFVSQETGNLYIAKVEASDVGNY 194

Query: 286 TCFARNKLGTA-----------QGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
           TC   N +  +           +  G +   E       PE      G +    C A+ +
Sbjct: 195 TCVVTNTVTNSRVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPSAKGTAVKLECFALGN 254

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYS--LTVTKSSELDSGQYTCRAQ 384
           P   +S  W R     D +  PR  + +  +  L +    + D+G Y C A+
Sbjct: 255 PVPTIS--WRRA----DGKQIPRKARRHRSNGLLEIPNFQQEDAGLYECVAE 300



 Score = 47.4 bits (111), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 90/227 (39%), Gaps = 21/227 (9%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP    L + + A    +SW P      +G  +GY+V+ W   + E + R+ I   G
Sbjct: 803  PTRAPIT-VLARSLSATDIEISWAPPRENQHKGRIQGYEVRCWRHDEKEENARK-IRTVG 860

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT----PEGVPGTVQSLEAIPLG 516
              T+ +V      +     V A+N A  GP S +++  T    P   PG +    +    
Sbjct: 861  NQTSAKVTNLQGNALYHLAVKAYNTAGTGPSSAMVNVTTKKPPPSQPPGNIIWNSS---- 916

Query: 517  SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
             S   L W  VK       + GYK+ Y+  + +           + +   TS +L+ L  
Sbjct: 917  DSKIILNWDQVKALDNESEVRGYKVLYRWNRQSSAS--------VIETNRTSVELS-LPF 967

Query: 575  STKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVIS 621
               Y I +  ++  GDG+ S+ +      N     G  ST N   +S
Sbjct: 968  DEDYIIEIKPFSDGGDGSSSEQIRIPKISNAYARGGSSSTSNACTLS 1014


>gi|16758574|ref|NP_446198.1| contactin-5 precursor [Rattus norvegicus]
 gi|55976161|sp|P97527.1|CNTN5_RAT RecName: Full=Contactin-5; AltName: Full=Neural recognition
           molecule NB-2; Flags: Precursor
 gi|1752643|dbj|BAA13311.1| NB-2 [Rattus norvegicus]
 gi|149020699|gb|EDL78504.1| rCG31728 [Rattus norvegicus]
          Length = 1099

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 162/611 (26%), Positives = 258/611 (42%), Gaps = 49/611 (8%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           A +   V++ C   G P+P   W K    I    R+ +      L I +++  D G Y C
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRKSQ--AVLEIPNLQLDDAGIYEC 369

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N  G+  S+   L +   P++  +           + +ECKA+G P P   W+ NG 
Sbjct: 370 TAENSRGK-NSFRGQLQIYTYPHWVQKLNDTQLDSGSPLQWECKATGKPRPTYRWLKNGA 428

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--EIT 222
           P+    P  R       + I ++ +SD G Y C A N  G +Y    + +LA  P  E+ 
Sbjct: 429 PLL---PQSRVDTANGVLAIHSVNQSDAGMYQCLAENKYGAIYASAELKILASPPSFELN 485

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFAD 281
           +  K       + V++ C+  G+PKP ++W    K + G  R  IL  G L+I + + AD
Sbjct: 486 QVKKSIIVTKDREVLIECKPQGSPKPAISWRKGDKAVRGNKRIAILPDGSLRILNASKAD 545

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+Y C   N  G+A+   S++VKE T I   P+  E+  G+S    C A+ D SL ++ 
Sbjct: 546 EGKYICQGVNIFGSAEIIASVSVKEPTRIELTPKRTELTVGESIVLNCKAMHDSSLDVTF 605

Query: 342 VWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A L
Sbjct: 606 YWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAEL 665

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKDGE 449
            V+ P   P    +++ I    A +SW+P +          Y +Q        W      
Sbjct: 666 LVRGP-PGPPGVVIVEEITESTATLSWSPATDN--HSPISSYNLQARSPFSLGWQTVK-- 720

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQ 508
            ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T  
Sbjct: 721 -TVPEVITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSIPSRMIRTNEAVPKTAP 777

Query: 509 SLEAIPLGSS---AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISD 561
           S   +  GS       + W  V  E  NG   GY + ++    +G K     E++   SD
Sbjct: 778 S--NVSGGSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSD 830

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPN 616
            +    +   + P T + + +  Y   GDG  S+ +        P   P +V     + +
Sbjct: 831 ASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPTAAPTDVTATSVSVS 890

Query: 617 NLVISWTAMPE 627
            + + W  + E
Sbjct: 891 EIFVVWKHVKE 901



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 158/669 (23%), Positives = 239/669 (35%), Gaps = 91/669 (13%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  V+ SD GSY C V N V  A+  S    +            P   V  P  + AA
Sbjct: 254 LYISKVQTSDVGSYICLVKNAVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPTTVTAA 313

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P I W+  NG      P   R +     + I NL+  D G Y C
Sbjct: 314 KGTTVKMECFALGNPVPTITWMKVNG----YIPSKSRLRKSQAVLEIPNLQLDDAGIYEC 369

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK 257
            A NS G       + +  + P   +   D     G  +   C+  G P+P   W+ N  
Sbjct: 370 TAENSRGKNSFRGQLQIYTY-PHWVQKLNDTQLDSGSPLQWECKATGKPRPTYRWLKNGA 428

Query: 258 ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDY 317
            L          G L I  V  +D+G Y C A NK G    S  L       I   P  +
Sbjct: 429 PLLPQSRVDTANGVLAIHSVNQSDAGMYQCLAENKYGAIYASAEL------KILASPPSF 482

Query: 318 E---------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
           E         V   +     C     P  K +I W +G + +      R     D SL +
Sbjct: 483 ELNQVKKSIIVTKDREVLIECKPQGSP--KPAISWRKGDKAV--RGNKRIAILPDGSLRI 538

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
             +S+ D G+Y C+        E  A+++V+ P          ++   +  V++   +  
Sbjct: 539 LNASKADEGKYICQGVNIFGSAEIIASVSVKEPTRIELTPKRTELTVGESIVLNCKAMHD 598

Query: 429 QSLR------------------GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKF 470
            SL                   GHF   + Q       +  IR +++         V   
Sbjct: 599 SSLDVTFYWTLKGQPIDFEKEGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQTT 655

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
             +  + A +L       GPP          G PG V   E   +  S   L W      
Sbjct: 656 ADSVSDEAELLV-----RGPP----------GPPGVVIVEE---ITESTATLSWSPATDN 697

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           +  +  Y ++ +S     +G   ++ +P +      SA    L P  +Y   +      G
Sbjct: 698 HSPISSYNLQARS--PFSLGWQTVKTVPEVITGDMESAMAVDLNPWVEYEFRVVATNPIG 755

Query: 590 DGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  S      +    VP   P NV G     + LVI+W  + E   N   F Y + +R 
Sbjct: 756 TGDPSIPSRMIRTNEAVPKTAPSNVSGGSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRP 815

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV---NK 698
           + T   W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V    +
Sbjct: 816 NGT-RGWKEKMVTSSDASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVVICSAE 872

Query: 699 GESTTTEVD 707
           GE T    D
Sbjct: 873 GEPTAAPTD 881



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 95/394 (24%), Positives = 150/394 (38%), Gaps = 39/394 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH-VEFSDQGSYTCEVS 107
           KKV L C   G P P   W ++G  I+            + II +  E  D G Y C  +
Sbjct: 117 KKVALNCEVRGNPSPTYRWLRNGTEIDLESDYRYSMIDGTFIINNPSESRDSGLYQCLAT 176

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N  G   S    L       F+      ++  E + V   C      PE    WV N  P
Sbjct: 177 NTFGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 236

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
            S    + RR +      + I  ++ SD G+Y C   N++                  V 
Sbjct: 237 -SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAVTNARVLSPPTPLTLRNDGVM 295

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            +    +  H P    A K      G TV + C   G P P + W+     +        
Sbjct: 296 GEYEPKIEVHFPTTVTAAK------GTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRK 349

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               L+I ++   D+G Y C A N  G     G L +  + H   +  D ++++G    +
Sbjct: 350 SQAVLEIPNLQLDDAGIYECTAENSRGKNSFRGQLQIYTYPHWVQKLNDTQLDSGSPLQW 409

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  + +  WL+   P+  +S    V + +  L +   ++ D+G Y C A+ + 
Sbjct: 410 ECKATGKP--RPTYRWLKNGAPLLPQSR---VDTANGVLAIHSVNQSDAGMYQCLAENKY 464

Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
             I A A L +   L +P +F L QV   KK+++
Sbjct: 465 GAIYASAELKI---LASPPSFELNQV---KKSII 492



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 121/295 (41%), Gaps = 35/295 (11%)

Query: 115 SYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           ++  D SV   P F  EP+   F   ++E+ V   C+  G P P   W+ NG  I     
Sbjct: 88  AFRQDESVDYGPVFVQEPDDIIFPTDSDEKKVALNCEVRGNPSPTYRWLRNGTEI-DLES 146

Query: 172 NPRRKVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
           + R  +      I N  +S D+G Y C ATN+ G +         A+    +   +   +
Sbjct: 147 DYRYSMIDGTFIINNPSESRDSGLYQCLATNTFGSILSREATLQFAYLGNFSGRTRSAVS 206

Query: 231 V-DGKTVVLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVAFA 280
           V +G+ VVL C    +P P       +W+ N+          R+   ETG+L I+ V  +
Sbjct: 207 VREGQGVVLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTS 262

Query: 281 DSGEYTCFARNKLGTAQ---GSGSLTVKEHTHITDQPEDYEVE--------AGQSATFRC 329
           D G Y C  +N +  A+       LT++    + +     EV          G +    C
Sbjct: 263 DVGSYICLVKNAVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPTTVTAAKGTTVKMEC 322

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
            A+ +P    +I W++ +  I  +S  R  Q+    L +      D+G Y C A+
Sbjct: 323 FALGNPV--PTITWMKVNGYIPSKSRLRKSQA---VLEIPNLQLDDAGIYECTAE 372



 Score = 44.3 bits (103), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  ++++V + C   G+P P   W K    +  + RI+    G SL I +   +D+
Sbjct: 488 KKSIIVTKDREVLIECKPQGSPKPAISWRKGDKAVRGNKRIAILPDG-SLRILNASKADE 546

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI-- 157
           G Y C+  N  G A+  +  +SV       + P+       E++   CKA      ++  
Sbjct: 547 GKYICQGVNIFGSAEIIA-SVSVKEPTRIELTPKRTELTVGESIVLNCKAMHDSSLDVTF 605

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          + R +     + I N+     G YGC
Sbjct: 606 YWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILLMHAGRYGC 650



 Score = 43.1 bits (100), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 86/203 (42%), Gaps = 23/203 (11%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP++ T   V    +  V W  V  +SL G  +G+++  W + + E S  E +  +G
Sbjct: 875  PTAAPTDVTATSV-SVSEIFVVWKHVK-ESL-GRPQGFEIGYWKDTEPEDSA-ETVRTRG 930

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT----PEGVPGTVQSLEAIPLG 516
              +   +      +     V A+NGA  GPPS  +S  T    P   PG ++  +     
Sbjct: 931  NESFVMLTGLEGDTLYHLTVRAYNGAGYGPPSREVSATTKRHPPSEPPGNLRWEQQ---- 986

Query: 517  SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
             S   L W  V+P      +MGYK+ Y+  +G   G ++E        T     +  L  
Sbjct: 987  GSQVSLGWEPVRPLANESEVMGYKVFYRQ-EGHSKGQVIE--------TQKPQAVVPLPE 1037

Query: 575  STKYRIHLAGYTKAGDGAESKYL 597
            +  Y I +  Y++ GDG  S  +
Sbjct: 1038 AGVYIIEVRAYSEGGDGTASSQI 1060


>gi|95007731|dbj|BAE94191.1| L1-like cell adhesion molecule [Dugesia japonica]
          Length = 1351

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 149/475 (31%), Positives = 215/475 (45%), Gaps = 25/475 (5%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPINPSDR---ISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           K+ L CI  G P P   W+  G   +  +R   I+    G  LII  V  +DQ ++ C  
Sbjct: 244 KLVLRCILSGYPSPNYKWTVKGQDKSILERPNFITDAG-GAILIINPVTTADQDTFQCTG 302

Query: 107 SNGVGEAK-SYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            N V          ++V   P  T +    N     +  F C+A G P P I W  NG  
Sbjct: 303 ENAVSNIPIVIDFQVNVEMTPILTTKLSDANVPYNGSHVFSCEAIGRPNPVITWTVNGVG 362

Query: 166 I-SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           + +      +RK+G N I + NL   D   + CNA+N +GY Y + Y+NVL   PE    
Sbjct: 363 LDTYLNGQNKRKIG-NTIYLTNLLPGDHAVFQCNASNYIGYDYSNGYINVLRDKPEFING 421

Query: 225 PKDEYT-VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSG 283
           P+      + K   + C+ F APK  V W  +   + GGRY I + GDL IT +  ADSG
Sbjct: 422 PQATLIKAENKPATINCQAFSAPKAIVTWTKDGFPINGGRYMIQDNGDLLITKLITADSG 481

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD--PSLKLSI 341
            YTC A N  G+  G+  + V++ T +  +P +  V  GQ   F C A +D   +  L I
Sbjct: 482 TYTCTATNLYGSISGTCVVFVRQRTELMIRPINTWVYFGQEVKFVCTAKTDRLETQNLKI 541

Query: 342 VWLRGSEPIDFESEPRF-VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ- 399
           VW + + PI      R      D SL +  +   D+G YTC A   LDF  A ATL VQ 
Sbjct: 542 VWYKDNSPITIGPYERTNTNLQDNSLIIMGAQTTDTGIYTCNATNGLDFDVAYATLIVQG 601

Query: 400 ---VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
               P++  ++ +  +  + ++AVVSWNP +          Y V+  T+ D +G      
Sbjct: 602 KPHTPIDIKADCS--RFANNREAVVSWNPGADN--YAPIVMYLVEYSTQFDRKGWYEVQK 657

Query: 457 VNKGESTTTEVDKFVPASKNFA----RVLAFNGAYNGPPSEIISFVTPEGVPGTV 507
           V K   +T E      A + F     RV A N      PS++   + P  +P T+
Sbjct: 658 VTKITGSTGETVDVKVAMQPFIQYQFRVRAINRVGVSEPSDVT--LNPCSLPPTI 710



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 8/117 (6%)

Query: 482  AFNGAY----NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
            A N  Y    + PP +I +F   E  PG V     + L  +   L+W  P + NG++ GY
Sbjct: 986  ALNAIYASTRSDPPIQITTF---EDTPGPVIDFNVLTLSINHVVLQWKSPTETNGIITGY 1042

Query: 538  KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            ++ ++ + G ++G  +   P ++DP     +++GL+  T YRI +   T  G G ES
Sbjct: 1043 RLAWREINGLELG-YMTTYPDLTDPNQLQFQMSGLKAQTNYRILIWALTSQGAGIES 1098



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 84/207 (40%), Gaps = 22/207 (10%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           +   NK   + C     P     W+KDG PIN    + Q N G  LI K +  +D G+YT
Sbjct: 427 IKAENKPATINCQAFSAPKAIVTWTKDGFPINGGRYMIQDN-GDLLITKLIT-ADSGTYT 484

Query: 104 CEVSNGVGEAKSYSIDL-----SVLAAP-----YFTVEPEFINAAEEETVTFECKASGLP 153
           C  +N  G      +        ++  P     YF  E +F+  A+ + +  +       
Sbjct: 485 CTATNLYGSISGTCVVFVRQRTELMIRPINTWVYFGQEVKFVCTAKTDRLETQ------- 537

Query: 154 EPEIHWVHNGKPISQAP-PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGY--VYKDV 210
             +I W  +  PI+  P       +  N + I   + +DTG Y CNATN L +   Y  +
Sbjct: 538 NLKIVWYKDNSPITIGPYERTNTNLQDNSLIIMGAQTTDTGIYTCNATNGLDFDVAYATL 597

Query: 211 YVNVLAHAPEITEAPKDEYTVDGKTVV 237
            V    H P   +A    +  + + VV
Sbjct: 598 IVQGKPHTPIDIKADCSRFANNREAVV 624



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 80/337 (23%), Positives = 124/337 (36%), Gaps = 40/337 (11%)

Query: 31  HAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGK--- 87
           + P   Y   K EV    + + L C+  G+P P   W K+    + S  I+ G Y K   
Sbjct: 24  YPPSFVYQPNKNEVYQNLEALMLRCVATGSPSPTYTWLKNNKVFDFS--INVGRYTKWPN 81

Query: 88  --SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAP---YFTVEPEFINAAEEET 142
             ++I+      D G Y C   N  G  K+YSI  +V  A    +   +PE I A + E 
Sbjct: 82  EGTMILALPNDDDDGIYQCIAENSHG--KAYSIKSNVRRAEIQNFKNKDPEKITARQGEY 139

Query: 143 VTFECKAS-GLPEPEIHWVHNGKPISQAPPNPRRKVG--PNRITIENL-RKSDTGNYGCN 198
           +  +C+     P P + W      I++      + V      + I  L  + D   + C 
Sbjct: 140 LLLKCEVPVCFPPPIVVWQKIKNGIAELIKESSKYVMDIDGNLYITGLTMEDDQAKFSCT 199

Query: 199 ATNSLGYVYKDVYVNVLAHAPEITEAP-----KDEYTVDGKT---VVLTCRVFGAPKPEV 250
             N    + K    + +   P  +  P     +    ++G+    +VL C + G P P  
Sbjct: 200 VYNQRMRMTKSDKEHWITVIPGQSNLPVVLRFRSLQPMNGRVGDKLVLRCILSGYPSPNY 259

Query: 251 NWIHNQKELTGGRYTILETGD---------LKITDVAFADSGEYTCFARNKLGTAQGSGS 301
            W      + G   +ILE  +         L I  V  AD   + C   N +        
Sbjct: 260 KW-----TVKGQDKSILERPNFITDAGGAILIINPVTTADQDTFQCTGENAVSNIPIVID 314

Query: 302 LTVK-EHTHI-TDQPEDYEVEAGQSATFRCNAVSDPS 336
             V  E T I T +  D  V    S  F C A+  P+
Sbjct: 315 FQVNVEMTPILTTKLSDANVPYNGSHVFSCEAIGRPN 351



 Score = 42.7 bits (99), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 8/83 (9%)

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF-------YVPFKNPDNVEGRGSTPN 616
           T   K+A ++P  +Y+  +    + G    S            +P KNP  V   G+  +
Sbjct: 668 TVDVKVA-MQPFIQYQFRVRAINRVGVSEPSDVTLNPCSLPPTIPNKNPKEVFVYGTAKD 726

Query: 617 NLVISWTAMPEIEHNAPHFKYRI 639
           NLVI WT M  +EH AP   Y I
Sbjct: 727 NLVIQWTPMTYVEHCAPKLVYHI 749


>gi|327269142|ref|XP_003219354.1| PREDICTED: contactin-5-like [Anolis carolinensis]
          Length = 1098

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 165/605 (27%), Positives = 257/605 (42%), Gaps = 51/605 (8%)

Query: 47  RNKKVELFCIFGGTPLPQTIWSKDGVPINPSD---RISQGNYGKSLIIKHVEFSDQGSYT 103
           +   +++ C   G P+P   W K   P NPS    R SQ      L I +V+  D G+Y 
Sbjct: 312 KGSTIKMECFALGNPVPTISWRKVNGP-NPSKARLRKSQA----VLEIPNVQLEDAGTYE 366

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C+  N  G    +   L V   P++T           + + +ECKA G P P   W+ NG
Sbjct: 367 CKAENSRGR-NVFRGQLQVYTYPHWTERLNDTQLDSGDQLRWECKAIGKPRPTYRWLKNG 425

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-- 221
            P+    P  R ++    + I ++ +SD G Y C A N  G +Y    + +LA AP    
Sbjct: 426 VPLW---PESRIEMVNGVLMIHSVNQSDAGMYQCVAENKHGAIYTSAELRILASAPTFPA 482

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
           +   K      G+ V + C+   +PKP ++W    K L    R T+L  G L+I +   +
Sbjct: 483 SHLKKTIIITKGQEVAVECKPQASPKPTISWKKGDKALRENKRITVLPDGSLRILNATKS 542

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D G+Y C   N  G+A+ + S+ VKE T I   P+  E+  G+S    C A+ DPSL + 
Sbjct: 543 DEGKYVCRGENVFGSAEITASVFVKEPTRIDLSPKRTELTVGESIVLSCKALHDPSLDVI 602

Query: 341 IVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
             W    +PIDFE E        VQ +   L +     + +G+Y CR QT  D I  +A 
Sbjct: 603 FHWTLNGQPIDFEKEGGHFESIRVQVSSADLMIRNILLMHAGRYGCRVQTTADSISDEAE 662

Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKDG 448
           L V+ P   P    +++ I    A +SW P +          Y +Q        W     
Sbjct: 663 LLVRGP-PGPPGVVIVEEITETTATLSWTPGADN--HSPITSYNLQARSPFSLGWQTVK- 718

Query: 449 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTV 507
             ++ E I   G+  +    +  P  +   RV+A N    G PS     + T E VP T 
Sbjct: 719 --TVPETI--SGDMESAMAVELNPWVEYEFRVVATNKIGTGDPSAPSRVIRTKEAVPKTA 774

Query: 508 QSLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISDP 562
            +  +   G      + W  V  E  NG   GY + ++    +G K     E++   SD 
Sbjct: 775 PANVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSDA 829

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNN 617
           +    +   + P T + + +  Y   GDG  S  +        P   P +V+  G + + 
Sbjct: 830 SKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSPIVVICSAEGEPSAAPTDVKATGLSVSE 889

Query: 618 LVISW 622
           ++I+W
Sbjct: 890 ILIAW 894



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 155/634 (24%), Positives = 239/634 (37%), Gaps = 78/634 (12%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS----IDL---SVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S    + L    V+      +E  F   +  
Sbjct: 251 NLYISKVQPSDVGSYICLVKNTVTNARVLSPPTPLTLRTDGVMGEYEPKIEVHFPYTVTT 310

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           A+  T+  EC A G P P I W     P    P   R +     + I N++  D G Y C
Sbjct: 311 AKGSTIKMECFALGNPVPTISWRKVNGP---NPSKARLRKSQAVLEIPNVQLEDAGTYEC 367

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK 257
            A NS G       + V  + P  TE   D     G  +   C+  G P+P   W+ N  
Sbjct: 368 KAENSRGRNVFRGQLQVYTY-PHWTERLNDTQLDSGDQLRWECKAIGKPRPTYRWLKNGV 426

Query: 258 ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEH------THIT 311
            L       +  G L I  V  +D+G Y C A NK G    S  L +         +H+ 
Sbjct: 427 PLWPESRIEMVNGVLMIHSVNQSDAGMYQCVAENKHGAIYTSAELRILASAPTFPASHLK 486

Query: 312 DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKS 371
              +   +  GQ     C   + P  K +I W +G + +      R     D SL +  +
Sbjct: 487 ---KTIIITKGQEVAVECKPQASP--KPTISWKKGDKAL--RENKRITVLPDGSLRILNA 539

Query: 372 SELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI---QVIDAKKA------ 419
           ++ D G+Y CR +      E  A++ V+ P     +P    L     ++ + KA      
Sbjct: 540 TKSDEGKYVCRGENVFGSAEITASVFVKEPTRIDLSPKRTELTVGESIVLSCKALHDPSL 599

Query: 420 --VVSW----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPA 473
             +  W     P+  +   GHF   +VQ       +  IR +++         V     +
Sbjct: 600 DVIFHWTLNGQPIDFEKEGGHFESIRVQV---SSADLMIRNILLMHAGRYGCRVQTTADS 656

Query: 474 SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV 533
             + A +L       GPP          G PG V   E   +  +   L W      +  
Sbjct: 657 ISDEAELLV-----RGPP----------GPPGVVIVEE---ITETTATLSWTPGADNHSP 698

Query: 534 LMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG- 591
           +  Y ++ +S     +G   ++ +P        SA    L P  +Y   +    K G G 
Sbjct: 699 ITSYNLQARS--PFSLGWQTVKTVPETISGDMESAMAVELNPWVEYEFRVVATNKIGTGD 756

Query: 592 --AESKYLF---YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
             A S+ +     VP   P NV GR    + LVI+W  + E   N   F Y + +R + T
Sbjct: 757 PSAPSRVIRTKEAVPKTAPANVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT 816

Query: 647 GEAWNQDDVLDWRQSELVLANQ--PTFQPYEIKV 678
              W +  V     S+ +  ++  P   P+E+KV
Sbjct: 817 -RGWKEKMVTSSDASKFIYRDESVPPLTPFEVKV 849



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 150/639 (23%), Positives = 247/639 (38%), Gaps = 84/639 (13%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+GVP+ P  RI   N    L+I  V  SD G Y C   N  G A 
Sbjct: 409  CKAIGKPRPTYRWLKNGVPLWPESRIEMVN--GVLMIHSVNQSDAGMYQCVAENKHG-AI 465

Query: 115  SYSIDLSVLA-APYFTVE--PEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
              S +L +LA AP F      + I   + + V  ECK    P+P I W    K + +   
Sbjct: 466  YTSAELRILASAPTFPASHLKKTIIITKGQEVAVECKPQASPKPTISWKKGDKALRE--- 522

Query: 172  NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP-EITEAPKDEY 229
            N R  V P+  + I N  KSD G Y C   N  G    ++  +V    P  I  +PK   
Sbjct: 523  NKRITVLPDGSLRILNATKSDEGKYVCRGENVFGSA--EITASVFVKEPTRIDLSPKRTE 580

Query: 230  TVDGKTVVLTCRVFGAPKPEV--NWIHNQK----ELTGGRYTILE----TGDLKITDVAF 279
               G+++VL+C+    P  +V  +W  N +    E  GG +  +     + DL I ++  
Sbjct: 581  LTVGESIVLSCKALHDPSLDVIFHWTLNGQPIDFEKEGGHFESIRVQVSSADLMIRNILL 640

Query: 280  ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
              +G Y C  +    +      L V+                G         +++ +  L
Sbjct: 641  MHAGRYGCRVQTTADSISDEAELLVRG-------------PPGPPGVVIVEEITETTATL 687

Query: 340  SIVWLRGSEPIDFESEPRFVQSNDYSL---TVTKSSELDSGQYTCRAQTELD-FIEAQAT 395
            S  W  G++     +       + +SL   TV    E  SG        EL+ ++E +  
Sbjct: 688  S--WTPGADNHSPITSYNLQARSPFSLGWQTVKTVPETISGDMESAMAVELNPWVEYEFR 745

Query: 396  LTV--------------------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
            +                       VP  AP+N +  +     + V++W PVS +   G  
Sbjct: 746  VVATNKIGTGDPSAPSRVIRTKEAVPKTAPANVSG-RSGRRHELVIAWEPVSEEFQNGEG 804

Query: 436  RGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF-ARVLAFNGAYNGPPSEI 494
             GY V  +      G   +++ +   S     D+ VP    F  +V  +N   +GP S I
Sbjct: 805  FGYIV-AFRPNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSPI 863

Query: 495  ISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
            +   + EG P    + ++A  L  S   + W   ++  G   G+++ Y      +     
Sbjct: 864  VVICSAEGEPSAAPTDVKATGLSVSEILIAWRHNKESVGRPQGFEVGYWKDMEQEEAAEK 923

Query: 554  ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS 613
             R    ++   +S  L GLE +T Y + +  Y  AG G  S  +     K+P +      
Sbjct: 924  AR----TEGNESSIILTGLEGNTLYHLRVKAYNAAGYGPPSNAVRVATKKSPPS-----Q 974

Query: 614  TPNNLV---------ISWTAMPEIEHNAPHFKYRIFWRR 643
             P+N++         + W  +  + + +    Y++ +R+
Sbjct: 975  APSNIMWIQDGSHVSLGWEPVRPLANESDVMGYKVLFRQ 1013



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 139/372 (37%), Gaps = 35/372 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH-VEFSDQGSYTCEVS 107
           KKV L C     P P   W ++G  I             S+II +  E  D G Y C  +
Sbjct: 115 KKVSLSCQARANPTPTYKWLRNGTEIEIESDYRYSVIEGSIIINNPSETKDTGLYQCITT 174

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPEPEI--HWVHNGK 164
           N  G   S    L       F+      ++  E + V   C    L  PEI   WV N  
Sbjct: 175 NMFGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPP-LHSPEIIYSWVFNEF 233

Query: 165 PISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA------ 216
           P S    + RR +      + I  ++ SD G+Y C   N++          VL+      
Sbjct: 234 P-SFVAEDSRRFISQETGNLYISKVQPSDVGSYICLVKNTV------TNARVLSPPTPLT 286

Query: 217 ---------HAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
                    + P+I    P    T  G T+ + C   G P P ++W              
Sbjct: 287 LRTDGVMGEYEPKIEVHFPYTVTTAKGSTIKMECFALGNPVPTISWRKVNGPNPSKARLR 346

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
                L+I +V   D+G Y C A N  G     G L V  + H T++  D ++++G    
Sbjct: 347 KSQAVLEIPNVQLEDAGTYECKAENSRGRNVFRGQLQVYTYPHWTERLNDTQLDSGDQLR 406

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + C A+  P  + +  WL+   P+  ES    V      L +   ++ D+G Y C A+ +
Sbjct: 407 WECKAIGKP--RPTYRWLKNGVPLWPESRIEMVNG---VLMIHSVNQSDAGMYQCVAENK 461

Query: 387 LDFIEAQATLTV 398
              I   A L +
Sbjct: 462 HGAIYTSAELRI 473



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 123/293 (41%), Gaps = 27/293 (9%)

Query: 113 AKSYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
           ++++  D SV   P F  EP+   F   ++E+ V+  C+A   P P   W+ NG  I + 
Sbjct: 84  SEAFKHDESVDYGPVFIQEPDNVIFPVDSDEKKVSLSCQARANPTPTYKWLRNGTEI-EI 142

Query: 170 PPNPRRKVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
             + R  V    I I N  ++ DTG Y C  TN  G +         A+    +   +  
Sbjct: 143 ESDYRYSVIEGSIIINNPSETKDTGLYQCITTNMFGSILSREATLQFAYLGNFSGRTRSA 202

Query: 229 YTV-DGKTVVLTCRV-FGAPKPEVNWIHNQ----KELTGGRYTILETGDLKITDVAFADS 282
            +V +G+ VVL C     +P+   +W+ N+          R+   ETG+L I+ V  +D 
Sbjct: 203 VSVREGQGVVLMCSPPLHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQPSDV 262

Query: 283 GEYTCFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATFRCNA 331
           G Y C  +N +  A+       LT++    + +     EV          G +    C A
Sbjct: 263 GSYICLVKNTVTNARVLSPPTPLTLRTDGVMGEYEPKIEVHFPYTVTTAKGSTIKMECFA 322

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           + +P   +S   + G  P    S+ R  +S    L +      D+G Y C+A+
Sbjct: 323 LGNPVPTISWRKVNGPNP----SKARLRKSQAV-LEIPNVQLEDAGTYECKAE 370


>gi|149029901|gb|EDL85013.1| rCG43874 [Rattus norvegicus]
          Length = 1133

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 212/469 (45%), Gaps = 15/469 (3%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W     P+ P+DR+   N+ K+L + +V   D G YT
Sbjct: 130 VALQGQSLILECIAEGFPTPTIKWLHPSDPM-PTDRVIYQNHNKTLQLLNVGEEDDGEYT 188

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 189 CLAENSLGSAR-HAYYVTVEAAPYWLQKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 247

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             I +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+     I  
Sbjct: 248 MSIEKVNKDQKYRIEQGSLILSNVQPSDTMVTQCEARNQHGLLLANAYIYVVQLPARILT 307

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
                Y  V+G T  L C+ FGAP P V W+  +    L   R+     G L I D+   
Sbjct: 308 KDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGTLGIRDLQAN 367

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VKE T IT  P     + G   TF C A  DPSL+ S
Sbjct: 368 DTGRYFCQAANDQNNVTILANLQVKEATQITQGPRSTIEKKGARVTFTCQASFDPSLQAS 427

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT-LT 397
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A  L 
Sbjct: 428 ITWRGDGRDLQERGDSDKYFIE--DGQLVIQSLDYSDQGNYSCVASTELDEVESRAQLLV 485

Query: 398 VQVPLEAPS-NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
           V  P   P    +   ++   +  +SW+P   +        Y ++   ++        L 
Sbjct: 486 VGSPGPVPHLELSDRHLLKQSQVHLSWSPA--EDHNSPIEKYDIEFEDKEMAPEKWFSLG 543

Query: 457 VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVP 504
              G  T+T + K  P      RV A N   +G PS +  + VTPE  P
Sbjct: 544 KVPGNQTSTTL-KLSPYVHYTFRVTAINKYGSGEPSPVSETVVTPEAAP 591



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 161/585 (27%), Positives = 247/585 (42%), Gaps = 93/585 (15%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--NLRKSDTGN 194
           A + +++  EC A G P P I W+H   P+    P  R     +  T++  N+ + D G 
Sbjct: 131 ALQGQSLILECIAEGFPTPTIKWLHPSDPM----PTDRVIYQNHNKTLQLLNVGEEDDGE 186

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           Y C A NSLG      YV V A AP   + P+      G+T  L C+V G P+PEV W  
Sbjct: 187 YTCLAENSLGSARHAYYVTVEA-APYWLQKPQSHLYGPGETARLDCQVQGRPQPEVTWRI 245

Query: 255 N----QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH- 309
           N    +K     +Y I E G L +++V  +D+    C ARN+ G    +  + V +    
Sbjct: 246 NGMSIEKVNKDQKYRI-EQGSLILSNVQPSDTMVTQCEARNQHGLLLANAYIYVVQLPAR 304

Query: 310 -ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
            +T   + Y    G +A   C A   P    S+ WL        + E RF    + +L +
Sbjct: 305 ILTKDNQTYMAVEGSTAYLLCKAFGAPVP--SVQWLDEEGTTVLQDE-RFFPYANGTLGI 361

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE-------------APSNFTLIQVID 415
                 D+G+Y C+A  + + +   A L V+   +             A   FT     D
Sbjct: 362 RDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITQGPRSTIEKKGARVTFTCQASFD 421

Query: 416 -AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSIRELIV----NKGESTTTE 466
            + +A ++W        RG  R  + +  ++K    DG+  I+ L      N     +TE
Sbjct: 422 PSLQASITW--------RGDGRDLQERGDSDKYFIEDGQLVIQSLDYSDQGNYSCVASTE 473

Query: 467 VDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP---LGSSAFYLK 523
           +D+     ++ A++L                    G PG V  LE      L  S  +L 
Sbjct: 474 LDEV----ESRAQLLVV------------------GSPGPVPHLELSDRHLLKQSQVHLS 511

Query: 524 WVKPEQPNGVLMGYKIKYQSVKGTKVGP----LLERLPYISDPTTTSAKLAGLEPSTKYR 579
           W   E  N  +  Y I+++     ++ P     L ++P   + T+T+ KL+   P   Y 
Sbjct: 512 WSPAEDHNSPIEKYDIEFED---KEMAPEKWFSLGKVP--GNQTSTTLKLS---PYVHYT 563

Query: 580 IHLAGYTKAGDGAESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAP 633
             +    K G G  S     V      P KNP +V G G+  NN+VI+W  +  ++ NAP
Sbjct: 564 FRVTAINKYGSGEPSPVSETVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAP 623

Query: 634 HFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
             +YR+ WR     E W +  V D     LV++N  TF PYEIKV
Sbjct: 624 QIQYRVQWRPLGKQETWKEQTVSD---PFLVVSNTSTFVPYEIKV 665



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 168/688 (24%), Positives = 268/688 (38%), Gaps = 78/688 (11%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSD-----RISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +G+ I   +     RI QG    SLI+ +V+ SD     CE  
Sbjct: 229 LDCQVQGRPQPEVTWRINGMSIEKVNKDQKYRIEQG----SLILSNVQPSDTMVTQCEAR 284

Query: 108 N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
           N  G+  A +Y I +  L A   T + +   A E  T    CKA G P P + W+   G 
Sbjct: 285 NQHGLLLANAY-IYVVQLPARILTKDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGT 343

Query: 165 PISQAP---PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
            + Q     P     +G     I +L+ +DTG Y C A N    V   +  N+ +  A +
Sbjct: 344 TVLQDERFFPYANGTLG-----IRDLQANDTGRYFCQAANDQNNV--TILANLQVKEATQ 396

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWIHNQKELT----GGRYTILETGDLKI 274
           IT+ P+      G  V  TC+    P  +  + W  + ++L       +Y I E G L I
Sbjct: 397 ITQGPRSTIEKKGARVTFTCQASFDPSLQASITWRGDGRDLQERGDSDKYFI-EDGQLVI 455

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVK------EHTHITDQP--EDYEVEAGQSAT 326
             + ++D G Y+C A  +L   +    L V        H  ++D+   +  +V    S  
Sbjct: 456 QSLDYSDQGNYSCVASTELDEVESRAQLLVVGSPGPVPHLELSDRHLLKQSQVHLSWSPA 515

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF----VQSNDYSLTVTKSSELDSGQYTCR 382
              N+   P  K  I +    E  +   E  F    V  N  S T+  S  +    YT R
Sbjct: 516 EDHNS---PIEKYDIEF----EDKEMAPEKWFSLGKVPGNQTSTTLKLSPYV---HYTFR 565

Query: 383 AQTELDFIEAQ---ATLTVQVPLEAPSNFTLI---QVIDAKKAVVSWNPVSPQSLRGHFR 436
                 +   +    + TV  P  AP    +    +  +    V++W P+          
Sbjct: 566 VTAINKYGSGEPSPVSETVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAPQI 625

Query: 437 GYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS 496
            Y+VQ W     + + +E  V+      +    FVP      +V A N    GP  ++  
Sbjct: 626 QYRVQ-WRPLGKQETWKEQTVSDPFLVVSNTSTFVPYE---IKVQAVNNQGKGPEPQVTI 681

Query: 497 FVTPEGVPGTVQSLEAIPL-GSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVKGTKVGP 551
             + E  P     LE I +  SS   ++W  V   Q  G L GY + Y  +  +      
Sbjct: 682 GYSGEDYPQVSPELEDITIFNSSTVLVRWRPVDLAQVKGHLRGYNVTYWWKGSQRKHSKR 741

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF---KNPDNV 608
            + +   +    TTSA L+GL P + Y + +  +   G G  S++ F  P     +P+ +
Sbjct: 742 HVHKSHMVVPANTTSAILSGLRPYSSYHVEVQAFNGRGLGPASEWTFSTPEGVPGHPEAL 801

Query: 609 EGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQ 668
                +  +L++ W   P + HN     Y + +   + GE+  Q    +    EL   N 
Sbjct: 802 HLECQSDTSLLLHW--QPPLSHNGVLTGYLLSYHPLD-GESKEQ-LFFNLSDPELRTHNL 857

Query: 669 PTFQP---YEIKVVQTWTEKDGEGSIRE 693
               P   Y  ++  T  +  GE  +RE
Sbjct: 858 TNLNPDLQYRFQLQATTQQGPGEAIVRE 885


>gi|74009165|ref|XP_549364.2| PREDICTED: neural cell adhesion molecule L1 isoform 3 [Canis lupus
           familiaris]
          Length = 1256

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 215/469 (45%), Gaps = 15/469 (3%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L + +V   D G Y 
Sbjct: 253 VALQGQPLVLECIAEGFPTPSIKWLRPSGPM-PADRVTYQNHNKTLQLLNVAEEDDGEYR 311

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G  + ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 312 CLAENSLGSDR-HTYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 370

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 371 IPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 430

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
              + Y  V+G T  L C+ FGAP P V W+  + +  L   R+     G L I D+   
Sbjct: 431 PDNETYMAVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQAN 490

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P+    + G   TF C A  DPSL+ S
Sbjct: 491 DTGHYFCQAANDQNNVTIVANLQVKDATQITQGPQSAIEKKGSKVTFTCQASFDPSLQHS 550

Query: 341 IVWL-RGSEPIDF-ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA-TLT 397
           I W   G    +F +S+  F++  D  L +      D G Y+C A TELD +E +A  L 
Sbjct: 551 ITWRGDGRNLQEFGDSDKYFIE--DGRLVIHSVDYSDQGNYSCVAGTELDMVEGRAELLV 608

Query: 398 VQVPLEAPS-NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
           V  P   P    +   ++   +  +SW P   +        Y ++   ++        L 
Sbjct: 609 VGSPGPVPHLELSDRHLLKQSQVRLSWRPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLG 666

Query: 457 VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVP 504
              G  T+T + K  P      RV A N    G PS    + VTPE  P
Sbjct: 667 KVPGNQTSTTL-KLSPYIHYTFRVTAINKYGPGEPSPASETVVTPEAAP 714



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 152/565 (26%), Positives = 237/565 (41%), Gaps = 53/565 (9%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--NLRKSDTGN 194
           A + + +  EC A G P P I W+    P+    P  R     +  T++  N+ + D G 
Sbjct: 254 ALQGQPLVLECIAEGFPTPSIKWLRPSGPM----PADRVTYQNHNKTLQLLNVAEEDDGE 309

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           Y C A NSLG      YV V A AP     P+      G+T  L C+V G P+PEV W  
Sbjct: 310 YRCLAENSLGSDRHTYYVTVEA-APYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRI 368

Query: 255 NQ---KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH-- 309
           N    +EL   +   ++ G L +++V  +D+    C ARN+ G    +  + V +     
Sbjct: 369 NGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKI 428

Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
           +T   E Y    G +A   C A   P    S+ WL        + E RF    + +L + 
Sbjct: 429 LTPDNETYMAVEGSTAYLLCKAFGAPVP--SVQWLDKEGKTVLQDE-RFFPYTNGTLGIR 485

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV------SW 423
                D+G Y C+A  + + +   A L V+   +          I+ K + V      S+
Sbjct: 486 DLQANDTGHYFCQAANDQNNVTIVANLQVKDATQITQGPQ--SAIEKKGSKVTFTCQASF 543

Query: 424 NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAF 483
           +P    S+     G  +Q + + D      +  +  G      VD       N++ V   
Sbjct: 544 DPSLQHSITWRGDGRNLQEFGDSD------KYFIEDGRLVIHSVD--YSDQGNYSCVAGT 595

Query: 484 NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQS 543
                   +E++   +P  VP    S   + L  S   L W   E  N  +  Y I+++ 
Sbjct: 596 ELDMVEGRAELLVVGSPGPVPHLELSDRHL-LKQSQVRLSWRPAEDHNAPIEKYDIEFED 654

Query: 544 VKGTKVGP----LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY 599
               ++ P     L ++P   + T+T+ KL+   P   Y   +    K G G  S     
Sbjct: 655 ---KEMAPEKWYSLGKVP--GNQTSTTLKLS---PYIHYTFRVTAINKYGPGEPSPASET 706

Query: 600 V------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQD 653
           V      P KNP +V+G G+  +N+VI+W  +  ++ NAP  +YR+ WR   T  AW + 
Sbjct: 707 VVTPEAAPEKNPVDVKGEGNETSNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGAWQEQ 766

Query: 654 DVLDWRQSELVLANQPTFQPYEIKV 678
            V D     LV++N  TF PYEIKV
Sbjct: 767 IVSD---PLLVVSNTSTFVPYEIKV 788



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 181/693 (26%), Positives = 269/693 (38%), Gaps = 88/693 (12%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI +G    +LI+ +V+ SD     CE  
Sbjct: 352  LDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRG----ALILSNVQPSDTMVTQCEAR 407

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN-GK 164
            N  G+  A +Y I +  L A   T + E   A E  T    CKA G P P + W+   GK
Sbjct: 408  NRHGLLLANAY-IYVVQLPAKILTPDNETYMAVEGSTAYLLCKAFGAPVPSVQWLDKEGK 466

Query: 165  PISQAPPNPRRKVGP---NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q       +  P     + I +L+ +DTG+Y C A N    V   +  N+ +  A +
Sbjct: 467  TVLQ-----DERFFPYTNGTLGIRDLQANDTGHYFCQAANDQNNV--TIVANLQVKDATQ 519

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWI---HNQKELTGGRYTILETGDLKIT 275
            IT+ P+      G  V  TC+    P  +  + W     N +E        +E G L I 
Sbjct: 520  ITQGPQSAIEKKGSKVTFTCQASFDPSLQHSITWRGDGRNLQEFGDSDKYFIEDGRLVIH 579

Query: 276  DVAFADSGEYTCFARNKLGTAQGSGSLTVK------EHTHITDQP--EDYEVEAGQSATF 327
             V ++D G Y+C A  +L   +G   L V        H  ++D+   +  +V        
Sbjct: 580  SVDYSDQGNYSCVAGTELDMVEGRAELLVVGSPGPVPHLELSDRHLLKQSQVRLSWRPAE 639

Query: 328  RCNAVSDPSLKLSIVWLRGSEPIDFESEPRF------VQSNDYSLTVTKSSELDSGQYTC 381
              NA   P  K  I      E  D E  P        V  N  S T+  S  +    YT 
Sbjct: 640  DHNA---PIEKYDI------EFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYI---HYTF 687

Query: 382  RAQTELDFIEAQ---ATLTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSPQSL 431
            R      +   +   A+ TV  P  AP        +D K         V++W P+     
Sbjct: 688  RVTAINKYGPGEPSPASETVVTPEAAPEK----NPVDVKGEGNETSNMVITWKPLRWMDW 743

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                  Y+VQ W  +   G+ +E IV+      +    FVP      +V A N    GP 
Sbjct: 744  NAPQVQYRVQ-WRPQGTRGAWQEQIVSDPLLVVSNTSTFVPYE---IKVQAVNSQGKGPE 799

Query: 492  SEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVKG 546
             +I    + E  P     +E I  L SSA  ++W  V P Q  G L GY + Y  +  + 
Sbjct: 800  PQITIGYSGEDYPQASPEMEGIKILNSSAVLVRWWPVDPAQVKGHLRGYNVTYWWEGSQR 859

Query: 547  TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPD 606
                  + R   +    TTSA L GL P + YR+ L  +   G G  S+  F  P   P 
Sbjct: 860  RHSKRHVHRGHVVVAANTTSAVLGGLRPYSSYRLELRAFNGRGLGPASEMTFSTPEGVPG 919

Query: 607  NVEG---RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSEL 663
            + E       +  +L++ W   P + HN     Y + +   + G+   +    D    EL
Sbjct: 920  HPEALHLECQSDTSLLLHW--QPPLSHNGVLTGYVLSYHPLDDGD--KEQLSFDLPDPEL 975

Query: 664  VLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
               N     P   Y  ++  T  E  GE  +RE
Sbjct: 976  RTHNLTNLSPHLRYRFQLQATTKEGPGEAIVRE 1008



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 147/585 (25%), Positives = 227/585 (38%), Gaps = 56/585 (9%)

Query: 44   VALRNKKVELFCIFGGTPLPQTIW-SKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
            +A+      L C   G P+P   W  K+G  +   +R      G +L I+ ++ +D G Y
Sbjct: 437  MAVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNG-TLGIRDLQANDTGHY 495

Query: 103  TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP--EPEIHWV 160
             C+ +N      +   +L V  A   T  P+     +   VTF C+AS  P  +  I W 
Sbjct: 496  FCQAANDQNNV-TIVANLQVKDATQITQGPQSAIEKKGSKVTFTCQASFDPSLQHSITWR 554

Query: 161  HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAH-AP 219
             +G+ + +   + +  +   R+ I ++  SD GNY C A   L  V     + V+    P
Sbjct: 555  GDGRNLQEFGDSDKYFIEDGRLVIHSVDYSDQGNYSCVAGTELDMVEGRAELLVVGSPGP 614

Query: 220  EITEAPKDEYTVDGKTVVLTCRV---FGAPKPEVNWIHNQKELTGGRYTILET--GDLKI 274
                   D + +    V L+ R      AP  + +     KE+   ++  L    G+   
Sbjct: 615  VPHLELSDRHLLKQSQVRLSWRPAEDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTS 674

Query: 275  TDVAFADSGEYT--CFARNKLGTAQGS--GSLTVKEHTHITDQPEDYEVEAGQSAT---- 326
            T +  +    YT    A NK G  + S      V         P D + E  +++     
Sbjct: 675  TTLKLSPYIHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETSNMVIT 734

Query: 327  ---FRCNAVSDPSLKLSIVW----LRGSEPIDFESEPRFVQSND-----YSLTVTKSSEL 374
                R    + P ++  + W     RG+      S+P  V SN      Y + V   +  
Sbjct: 735  WKPLRWMDWNAPQVQYRVQWRPQGTRGAWQEQIVSDPLLVVSNTSTFVPYEIKVQAVNSQ 794

Query: 375  DSGQYTCRAQTELDFIEAQATLTV---QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
              G             E Q T+       P  +P     I+++++   +V W PV P  +
Sbjct: 795  GKGP------------EPQITIGYSGEDYPQASPE-MEGIKILNSSAVLVRWWPVDPAQV 841

Query: 432  RGHFRGYKVQTWTE-----KDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
            +GH RGY V  W E            R  +V    +T+  +    P S     + AFNG 
Sbjct: 842  KGHLRGYNVTYWWEGSQRRHSKRHVHRGHVVVAANTTSAVLGGLRPYSSYRLELRAFNGR 901

Query: 487  YNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKG 546
              GP SE+ +F TPEGVPG  ++L       ++  L W  P   NGVL GY + Y  +  
Sbjct: 902  GLGPASEM-TFSTPEGVPGHPEALHLECQSDTSLLLHWQPPLSHNGVLTGYVLSYHPLDD 960

Query: 547  TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
                 L   LP   DP   +  L  L P  +YR  L   TK G G
Sbjct: 961  GDKEQLSFDLP---DPELRTHNLTNLSPHLRYRFQLQATTKEGPG 1002



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 169/403 (41%), Gaps = 36/403 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P +     + Q  +  S  I   + 
Sbjct: 43  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVHQAPHSGSFTITGNNS 102

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG+Y C  SN +G A S+ I L    AP +    V+P  +   E E+V   C  
Sbjct: 103 NFAQRFQGTYRCFASNKLGTAMSHEIQLMAEGAPKWPKEMVKP--VEVEEGESVILPCHP 160

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 161 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 218

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 219 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPSIKWLR 278

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++ +VA  D GEY C A N LG+ + +  +TV+   +   +
Sbjct: 279 PSGPMPADRVTYQNHNKTLQLLNVAEEDDGEYRCLAENSLGSDRHTYYVTVEAAPYWLHK 338

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++  ++ +  +    +L ++    
Sbjct: 339 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQP 396

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVPLE--APSNFTLIQV 413
            D+    C A+     + A A +  VQ+P +   P N T + V
Sbjct: 397 SDTMVTQCEARNRHGLLLANAYIYVVQLPAKILTPDNETYMAV 439


>gi|345787930|ref|XP_542227.3| PREDICTED: contactin-5 [Canis lupus familiaris]
          Length = 1100

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 163/611 (26%), Positives = 262/611 (42%), Gaps = 49/611 (8%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           A +   V++ C   G P+P   W K    +P     R SQ      L I +V+  D G Y
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQA----VLEIPNVQLDDAGLY 367

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C   N  G+  S+   L V   P++  +           + +ECKA+G P P   W+ N
Sbjct: 368 ECRAENSRGK-NSFRGQLQVYTYPHWVEKLNDTQLDSGSPLQWECKATGKPRPTYRWLKN 426

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--E 220
           G P+    P  R ++    + I N+ +SD G Y C A N  G +Y    + +LA AP   
Sbjct: 427 GVPLL---PQNRIEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFA 483

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
           + +  K      G+ VV+ C+  G+PKP ++W    K +    R   L  G L+I + + 
Sbjct: 484 LNQLKKTIIVTKGQEVVIECKPQGSPKPTISWKKGDKAVRENKRIANLPDGSLRILNASK 543

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           +D G+Y C   N  G+++   S++VKE T I   P+  E+  G+S    C A+ D SL +
Sbjct: 544 SDEGKYVCQGENVFGSSEIIASVSVKEPTKIELTPKRTELTVGESIVLNCKAIHDASLDI 603

Query: 340 SIVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +  W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A
Sbjct: 604 TFYWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEA 663

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKD 447
            L V+ P   P    +++ I    A +SW+P +          Y +Q        W    
Sbjct: 664 ELLVRGP-PGPPGVVIVEEITESTATLSWSPAADN--HSPISSYNLQARSPFSLGWQTVK 720

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGT 506
              +I E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T
Sbjct: 721 ---TIPEIITGDLESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKT 775

Query: 507 VQSLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISD 561
             +  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+
Sbjct: 776 APTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSE 830

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPN 616
            +    +   + P T + + +  Y   GDG  S+ +        P   P +V+    + +
Sbjct: 831 ASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVS 890

Query: 617 NLVISWTAMPE 627
            ++++W  + E
Sbjct: 891 EILVAWKHIKE 901



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 156/650 (24%), Positives = 242/650 (37%), Gaps = 76/650 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + A
Sbjct: 253 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 312

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I N++  D G Y 
Sbjct: 313 AKGTTVKMECFALGNPVPTITWMKVNG----YIPSKARLRKSQAVLEIPNVQLDDAGLYE 368

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V  + P   E   D     G  +   C+  G P+P   W+ N 
Sbjct: 369 CRAENSRGKNSFRGQLQVYTY-PHWVEKLNDTQLDSGSPLQWECKATGKPRPTYRWLKNG 427

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITDQ 313
             L       +  G L I +V  +D+G Y C A NK G    S  L +        +   
Sbjct: 428 VPLLPQNRIEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQL 487

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +   V  GQ     C     P  K +I W +G + +      R     D SL +  +S+
Sbjct: 488 KKTIIVTKGQEVVIECKPQGSP--KPTISWKKGDKAV--RENKRIANLPDGSLRILNASK 543

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR- 432
            D G+Y C+ +      E  A+++V+ P +        ++   +  V++   +   SL  
Sbjct: 544 SDEGKYVCQGENVFGSSEIIASVSVKEPTKIELTPKRTELTVGESIVLNCKAIHDASLDI 603

Query: 433 -----------------GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
                            GHF   + Q       +  IR +++         V     +  
Sbjct: 604 TFYWTLKGQPIDFEKEGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQTTADSVS 660

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
           + A +L       GPP          G PG V   E   +  S   L W      +  + 
Sbjct: 661 DEAELLV-----RGPP----------GPPGVVIVEE---ITESTATLSWSPAADNHSPIS 702

Query: 536 GYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y ++ +S     +G   ++ +P I      SA    L P  +Y   +      G G  S
Sbjct: 703 SYNLQARS--PFSLGWQTVKTIPEIITGDLESAMAVDLNPWVEYEFRVVATNPIGTGDPS 760

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P NV GR    + LVI+W  + E   N   F Y + +R + T  
Sbjct: 761 TPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT-R 819

Query: 649 AWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
            W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V
Sbjct: 820 GWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVV 867



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 151/635 (23%), Positives = 252/635 (39%), Gaps = 76/635 (11%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+GVP+ P +RI   N    L+I +V  SD G Y C   N  G A 
Sbjct: 411  CKATGKPRPTYRWLKNGVPLLPQNRIEMVN--GVLMIHNVNQSDAGMYQCLAENKYG-AI 467

Query: 115  SYSIDLSVLA-APYFTVE--PEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
              S +L +LA AP F +    + I   + + V  ECK  G P+P I W    K + +   
Sbjct: 468  YASAELKILASAPTFALNQLKKTIIVTKGQEVVIECKPQGSPKPTISWKKGDKAVRE--- 524

Query: 172  NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP-EITEAPKDEY 229
            N R    P+  + I N  KSD G Y C   N  G    ++  +V    P +I   PK   
Sbjct: 525  NKRIANLPDGSLRILNASKSDEGKYVCQGENVFGS--SEIIASVSVKEPTKIELTPKRTE 582

Query: 230  TVDGKTVVLTCRVFGAPKPEVNWIHNQK------ELTGGRYTILE----TGDLKITDVAF 279
               G+++VL C+       ++ +    K      E  GG +  +     + DL I ++  
Sbjct: 583  LTVGESIVLNCKAIHDASLDITFYWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILL 642

Query: 280  ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE--AGQSATFRCNAVSDPSL 337
              +G Y C  +    +      L V+        P    VE     +AT   +  +D   
Sbjct: 643  MHAGRYGCRVQTTADSVSDEAELLVRGPP---GPPGVVIVEEITESTATLSWSPAADNHS 699

Query: 338  KLSIVWLRGSEPIDF-----ESEPRFVQSN-------------DYSLTVTKSSELDSGQY 379
             +S   L+   P        ++ P  +  +             +Y   V  ++ + +G  
Sbjct: 700  PISSYNLQARSPFSLGWQTVKTIPEIITGDLESAMAVDLNPWVEYEFRVVATNPIGTGD- 758

Query: 380  TCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYK 439
                 T    I         VP  AP+N +  +     + V++W PVS +   G   GY 
Sbjct: 759  ---PSTPSRMIRTNEA----VPKTAPTNVSG-RSGRRHELVIAWEPVSEEFQNGEGFGYI 810

Query: 440  VQTWTEKDGEGSIRELIVNKGESTT-TEVDKFVPASKNF-ARVLAFNGAYNGPPSEIISF 497
            V      +G    +E +V   E++     D+ VP    F  +V  +N   +GP S+I+  
Sbjct: 811  VAF--RPNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVI 868

Query: 498  VTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY-QSVKGTKVGPLLER 555
             + EG P    + ++A  +  S   + W   ++  G   G+++ Y + ++       ++ 
Sbjct: 869  CSAEGEPSAAPTDVKATSVSVSEILVAWKHIKESLGRPQGFEVGYWKDMEQEDAAETVK- 927

Query: 556  LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNV-- 608
                +    +S  L GLE +T Y   +  Y  AG G  S  +        P + P N+  
Sbjct: 928  ----TRANESSVILTGLEGNTLYHFTVRAYNGAGYGPPSSEVRATTKKSPPSQAPSNLRW 983

Query: 609  EGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            E +GS    L + W  +  + + +    Y++F+R+
Sbjct: 984  EQQGS---QLSLGWEPVRPLTNESDVMGYKVFYRQ 1015



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 95/394 (24%), Positives = 147/394 (37%), Gaps = 39/394 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           KKV L C     P+P   W ++G  I+  SD       G  +I    E  D G Y C   
Sbjct: 117 KKVALNCEAHSNPVPNYRWLRNGTEIDLESDYRYSLIDGTFIISNPGEAKDSGHYQCLAV 176

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N +G   S    L       F+      ++  E + V   C      PE    WV N  P
Sbjct: 177 NTLGSILSREAILQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 236

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
            S    + RR +      + I  ++ SD G+Y C   N++                  V 
Sbjct: 237 -SFVVEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVM 295

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            +    +  H P    A K      G TV + C   G P P + W+     +        
Sbjct: 296 GEYEPKIEVHFPFTVTAAK------GTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK 349

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               L+I +V   D+G Y C A N  G     G L V  + H  ++  D ++++G    +
Sbjct: 350 SQAVLEIPNVQLDDAGLYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSPLQW 409

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  + +  WL+   P+  ++    V      L +   ++ D+G Y C A+ + 
Sbjct: 410 ECKATGKP--RPTYRWLKNGVPLLPQNRIEMVNG---VLMIHNVNQSDAGMYQCLAENKY 464

Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
             I A A L +   L +   F L Q+   KK ++
Sbjct: 465 GAIYASAELKI---LASAPTFALNQL---KKTII 492



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 120/296 (40%), Gaps = 33/296 (11%)

Query: 113 AKSYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
           + ++  D SV   P F  EP+   F   +EE+ V   C+A   P P   W+ NG  I   
Sbjct: 86  SDAFKQDESVDYGPVFVQEPDDIIFPTDSEEKKVALNCEAHSNPVPNYRWLRNGTEIDLE 145

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
                  +    I        D+G+Y C A N+LG +     +   A+    +   +   
Sbjct: 146 SDYRYSLIDGTFIISNPGEAKDSGHYQCLAVNTLGSILSREAILQFAYLGNFSGRTRSAV 205

Query: 230 TV-DGKTVVLTCRVFGAPKPE-----VNWIHNQKEL----TGGRYTILETGDLKITDVAF 279
           +V +G+ VVL C    +P P       +W+ N+          R+   ETG+L I+ V  
Sbjct: 206 SVREGQGVVLMC----SPPPHSPEIIYSWVFNEFPSFVVEDSRRFISQETGNLYISKVQT 261

Query: 280 ADSGEYTCFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATFR 328
           +D G Y C  +N +  A+       LT++    + +     EV          G +    
Sbjct: 262 SDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKME 321

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           C A+ +P    +I W++ +  I  ++  R  Q+    L +      D+G Y CRA+
Sbjct: 322 CFALGNPV--PTITWMKVNGYIPSKARLRKSQA---VLEIPNVQLDDAGLYECRAE 372



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 68/165 (41%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  + ++V + C   G+P P   W K    +  + RI+    G SL I +   SD+
Sbjct: 488 KKTIIVTKGQEVVIECKPQGSPKPTISWKKGDKAVRENKRIANLPDG-SLRILNASKSDE 546

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI-- 157
           G Y C+  N  G ++  +  +SV       + P+       E++   CKA      +I  
Sbjct: 547 GKYVCQGENVFGSSEIIA-SVSVKEPTKIELTPKRTELTVGESIVLNCKAIHDASLDITF 605

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          + R +     + I N+     G YGC
Sbjct: 606 YWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILLMHAGRYGC 650



 Score = 39.3 bits (90), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 81/199 (40%), Gaps = 15/199 (7%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP++     V    + +V+W  +  +SL G  +G++V  W + + E +   +     
Sbjct: 875  PSAAPTDVKATSV-SVSEILVAWKHIK-ESL-GRPQGFEVGYWKDMEQEDAAETVKTRAN 931

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
            ES+            +F  V A+NGA  GPPS  +   T +  P    S        S  
Sbjct: 932  ESSVILTGLEGNTLYHFT-VRAYNGAGYGPPSSEVRATTKKSPPSQAPSNLRWEQQGSQL 990

Query: 521  YLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
             L W  V+P      +MGYK+ Y+  +G     ++E        T     +  L  +  Y
Sbjct: 991  SLGWEPVRPLTNESDVMGYKVFYRQ-EGHSNSQVIE--------TQKPQAIVPLPDAGVY 1041

Query: 579  RIHLAGYTKAGDGAESKYL 597
             I +  Y++ GDG  S  +
Sbjct: 1042 VIEVRAYSEGGDGTASSQI 1060


>gi|301786901|ref|XP_002928861.1| PREDICTED: LOW QUALITY PROTEIN: neural cell adhesion molecule
           L1-like [Ailuropoda melanoleuca]
          Length = 1229

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 217/469 (46%), Gaps = 15/469 (3%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L + +V   D G Y 
Sbjct: 222 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLNVMEEDDGEYR 280

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G  + ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 281 CLAENSLGSDR-HTYYITVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 339

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 340 IPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 399

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
              + Y  V+G T  L C+ FGAP P V W+  + +  L   R+     G L I D+   
Sbjct: 400 PDNETYMAVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQAN 459

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P+    + G   TF C A  DPSL+ S
Sbjct: 460 DTGHYFCQAANDQNNVTVVANLQVKDATQITQGPQSAIEKKGSKVTFTCEASFDPSLQHS 519

Query: 341 IVWL-RGSEPIDF-ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA-TLT 397
           I W   G    +F +S+  F++  D  L +      D G Y+C A TELD +E++A  L 
Sbjct: 520 ITWRGDGRNLQEFGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVAGTELDVVESRAELLV 577

Query: 398 VQVPLEAPS-NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
           V  P   P    +   ++   +  +SW+P    +       Y ++   ++        L 
Sbjct: 578 VGSPGPVPQLELSDRHLLKQSQVRLSWSPADDHN--APIEKYDIEFEDKEMAPQEWYSLG 635

Query: 457 VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVP 504
              G  T+T + K  P      RV A N    G PS    + VTPE  P
Sbjct: 636 KVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPASETVVTPEAAP 683



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 156/575 (27%), Positives = 238/575 (41%), Gaps = 73/575 (12%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--NLRKSDTGN 194
           A + + +  EC A G P P I W+    P+    P  R     +  T++  N+ + D G 
Sbjct: 223 ALQGQPLVLECIAEGFPTPTIKWLRPSGPM----PADRVTYQNHNKTLQLLNVMEEDDGE 278

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           Y C A NSLG      Y+ V A AP     P+      G+T  L C+V G P+PEV W  
Sbjct: 279 YRCLAENSLGSDRHTYYITVEA-APYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRI 337

Query: 255 NQ---KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH-- 309
           N    +EL   +   ++ G L +++V  +D+    C ARN+ G    +  + V +     
Sbjct: 338 NGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKI 397

Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
           +T   E Y    G +A   C A   P    S+ WL        + E RF    + +L + 
Sbjct: 398 LTPDNETYMAVEGSTAYLLCKAFGAPVP--SVQWLDKEGKTVLQDE-RFFPYTNGTLGIR 454

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQ 429
                D+G Y C+A  + + +   A L               QV DA +         PQ
Sbjct: 455 DLQANDTGHYFCQAANDQNNVTVVANL---------------QVKDATQITQG-----PQ 494

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTE----VDK-FVPASKNFARVLAFN 484
           S     +G KV    E   + S++  I  +G+    +     DK F+   +     L ++
Sbjct: 495 SAI-EKKGSKVTFTCEASFDPSLQHSITWRGDGRNLQEFGDSDKYFIEDGRLVIHSLDYS 553

Query: 485 --GAYNGPPSEIISFVTPE------GVPGTVQSLEAIP---LGSSAFYLKWVKPEQPNGV 533
             G Y+      +  V         G PG V  LE      L  S   L W   +  N  
Sbjct: 554 DQGNYSCVAGTELDVVESRAELLVVGSPGPVPQLELSDRHLLKQSQVRLSWSPADDHNAP 613

Query: 534 LMGYKIKYQSVKGTKVGPL----LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           +  Y I+++     ++ P     L ++P   + T+T+ KL+   P   Y   +    K G
Sbjct: 614 IEKYDIEFED---KEMAPQEWYSLGKVP--GNQTSTTLKLS---PYVHYTFRVTAINKYG 665

Query: 590 DGAESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  S     V      P KNP +V+G G+  +N+VI+W  +  ++ NAP  +YR+ WR 
Sbjct: 666 PGEPSPASETVVTPEAAPEKNPVDVKGEGNETSNMVITWKPLRWMDWNAPQVQYRVQWRP 725

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
             T   W +  V D     LV++N  TF PYEIKV
Sbjct: 726 QGTRGTWQEQIVSD---PLLVVSNTSTFVPYEIKV 757



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 171/687 (24%), Positives = 264/687 (38%), Gaps = 75/687 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L C   G P P+  W  +G+P+     +   RI +G    +LI+ +V+ SD     CE  
Sbjct: 321 LDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRG----ALILSNVQPSDTMVTQCEAR 376

Query: 108 N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN-GK 164
           N  G+  A +Y I +  L A   T + E   A E  T    CKA G P P + W+   GK
Sbjct: 377 NRHGLLLANAY-IYVVQLPAKILTPDNETYMAVEGSTAYLLCKAFGAPVPSVQWLDKEGK 435

Query: 165 PISQAPPNPRRKVGP---NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
            + Q       +  P     + I +L+ +DTG+Y C A N    V   V  N+ +  A +
Sbjct: 436 TVLQ-----DERFFPYTNGTLGIRDLQANDTGHYFCQAANDQNNV--TVVANLQVKDATQ 488

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWI---HNQKELTGGRYTILETGDLKIT 275
           IT+ P+      G  V  TC     P  +  + W     N +E        +E G L I 
Sbjct: 489 ITQGPQSAIEKKGSKVTFTCEASFDPSLQHSITWRGDGRNLQEFGDSDKYFIEDGRLVIH 548

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
            + ++D G Y+C A  +L   +    L V        Q E  +    + +  R +     
Sbjct: 549 SLDYSDQGNYSCVAGTELDVVESRAELLVVGSPGPVPQLELSDRHLLKQSQVRLSWSPAD 608

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSND-YSLTVTKSSELDSG-------QYTCRAQTEL 387
                I      E  D E E + +   + YSL     ++  +         YT R     
Sbjct: 609 DHNAPI------EKYDIEFEDKEMAPQEWYSLGKVPGNQTSTTLKLSPYVHYTFRVTAIN 662

Query: 388 DFIEAQ---ATLTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSPQSLRGHFRG 437
            +   +   A+ TV  P  AP        +D K         V++W P+           
Sbjct: 663 KYGPGEPSPASETVVTPEAAPEK----NPVDVKGEGNETSNMVITWKPLRWMDWNAPQVQ 718

Query: 438 YKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
           Y+VQ W  +   G+ +E IV+      +    FVP      +V + N    GP  +I   
Sbjct: 719 YRVQ-WRPQGTRGTWQEQIVSDPLLVVSNTSTFVPYE---IKVQSVNSQGKGPEPQITIG 774

Query: 498 VTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVKGTKVGPL 552
            + E  P     LE +  L SSA  ++W  V P Q  G L GY + Y  +  +       
Sbjct: 775 YSGEDYPQASPELEGVKILNSSAVLVRWWPVDPAQVKGHLRGYNVTYWWEGSQRKHSKRH 834

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEG-- 610
             +   +    TTSA L GL P + YR+ +  +   G G  S+  F  P   P + E   
Sbjct: 835 AHKSHVLVPANTTSAVLGGLRPYSSYRLEVQAFNGRGLGPASEMTFRTPEGVPGHPEALH 894

Query: 611 -RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQP 669
               +  +L++ W   P++ HN     Y + +   + G+   +    D    EL   N  
Sbjct: 895 LECQSDTSLLLHWQP-PQLSHNGVLTGYVLSYHPLDDGD--KEQLSFDLPDPELRTHNLT 951

Query: 670 TFQP---YEIKVVQTWTEKDGEGSIRE 693
              P   Y  ++  T  E  GE  +RE
Sbjct: 952 NLSPHLRYRFQLQATTKEGPGEAIVRE 978



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 145/586 (24%), Positives = 229/586 (39%), Gaps = 57/586 (9%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIW-SKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           +A+      L C   G P+P   W  K+G  +   +R      G +L I+ ++ +D G Y
Sbjct: 406 MAVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNG-TLGIRDLQANDTGHY 464

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP--EPEIHWV 160
            C+ +N      +   +L V  A   T  P+     +   VTF C+AS  P  +  I W 
Sbjct: 465 FCQAANDQNNV-TVVANLQVKDATQITQGPQSAIEKKGSKVTFTCEASFDPSLQHSITWR 523

Query: 161 HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
            +G+ + +   + +  +   R+ I +L  SD GNY C A   L  V     + V+     
Sbjct: 524 GDGRNLQEFGDSDKYFIEDGRLVIHSLDYSDQGNYSCVAGTELDVVESRAELLVVGSPGP 583

Query: 221 ITEAP-KDEYTVDGKTVVLT---CRVFGAPKPEVNWIHNQKELTGGRYTILET--GDLKI 274
           + +    D + +    V L+        AP  + +     KE+    +  L    G+   
Sbjct: 584 VPQLELSDRHLLKQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPQEWYSLGKVPGNQTS 643

Query: 275 TDVAFADSGEYT--CFARNKLGTAQGS--GSLTVKEHTHITDQPEDYEVEAGQSAT---- 326
           T +  +    YT    A NK G  + S      V         P D + E  +++     
Sbjct: 644 TTLKLSPYVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETSNMVIT 703

Query: 327 ---FRCNAVSDPSLKLSIVW----LRGSEPIDFESEPRFVQSND-----YSLTVTKSSEL 374
               R    + P ++  + W     RG+      S+P  V SN      Y + V   +  
Sbjct: 704 WKPLRWMDWNAPQVQYRVQWRPQGTRGTWQEQIVSDPLLVVSNTSTFVPYEIKVQSVNSQ 763

Query: 375 DSG---QYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
             G   Q T     E D+ +A   L              ++++++   +V W PV P  +
Sbjct: 764 GKGPEPQITIGYSGE-DYPQASPELEG------------VKILNSSAVLVRWWPVDPAQV 810

Query: 432 RGHFRGYKVQTWTE-----KDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
           +GH RGY V  W E          + +  ++    +T+  +    P S     V AFNG 
Sbjct: 811 KGHLRGYNVTYWWEGSQRKHSKRHAHKSHVLVPANTTSAVLGGLRPYSSYRLEVQAFNGR 870

Query: 487 YNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPE-QPNGVLMGYKIKYQSVK 545
             GP SE ++F TPEGVPG  ++L       ++  L W  P+   NGVL GY + Y  + 
Sbjct: 871 GLGPASE-MTFRTPEGVPGHPEALHLECQSDTSLLLHWQPPQLSHNGVLTGYVLSYHPLD 929

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
                 L   LP   DP   +  L  L P  +YR  L   TK G G
Sbjct: 930 DGDKEQLSFDLP---DPELRTHNLTNLSPHLRYRFQLQATTKEGPG 972



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 167/403 (41%), Gaps = 36/403 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P +     + Q     S  I   + 
Sbjct: 12  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVHQAPRSGSFTITGNNS 71

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P  +   E E+V   C  
Sbjct: 72  NFAQRFQGIYRCFASNKLGTAMSHEIQLMAEGAPKWPKETVKP--VEVEEGESVILPCHP 129

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 130 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 187

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 188 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 247

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++ +V   D GEY C A N LG+ + +  +TV+   +   +
Sbjct: 248 PSGPMPADRVTYQNHNKTLQLLNVMEEDDGEYRCLAENSLGSDRHTYYITVEAAPYWLHK 307

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++  ++ +  +    +L ++    
Sbjct: 308 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQP 365

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVPLE--APSNFTLIQV 413
            D+    C A+     + A A +  VQ+P +   P N T + V
Sbjct: 366 SDTMVTQCEARNRHGLLLANAYIYVVQLPAKILTPDNETYMAV 408


>gi|345807361|ref|XP_003435599.1| PREDICTED: neural cell adhesion molecule L1 isoform 1 [Canis lupus
           familiaris]
          Length = 1252

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 215/469 (45%), Gaps = 15/469 (3%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L + +V   D G Y 
Sbjct: 253 VALQGQPLVLECIAEGFPTPSIKWLRPSGPM-PADRVTYQNHNKTLQLLNVAEEDDGEYR 311

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G  + ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 312 CLAENSLGSDR-HTYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 370

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 371 IPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 430

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
              + Y  V+G T  L C+ FGAP P V W+  + +  L   R+     G L I D+   
Sbjct: 431 PDNETYMAVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQAN 490

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P+    + G   TF C A  DPSL+ S
Sbjct: 491 DTGHYFCQAANDQNNVTIVANLQVKDATQITQGPQSAIEKKGSKVTFTCQASFDPSLQHS 550

Query: 341 IVWL-RGSEPIDF-ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA-TLT 397
           I W   G    +F +S+  F++  D  L +      D G Y+C A TELD +E +A  L 
Sbjct: 551 ITWRGDGRNLQEFGDSDKYFIE--DGRLVIHSVDYSDQGNYSCVAGTELDMVEGRAELLV 608

Query: 398 VQVPLEAPS-NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
           V  P   P    +   ++   +  +SW P   +        Y ++   ++        L 
Sbjct: 609 VGSPGPVPHLELSDRHLLKQSQVRLSWRPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLG 666

Query: 457 VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVP 504
              G  T+T + K  P      RV A N    G PS    + VTPE  P
Sbjct: 667 KVPGNQTSTTL-KLSPYIHYTFRVTAINKYGPGEPSPASETVVTPEAAP 714



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 152/565 (26%), Positives = 237/565 (41%), Gaps = 53/565 (9%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--NLRKSDTGN 194
           A + + +  EC A G P P I W+    P+    P  R     +  T++  N+ + D G 
Sbjct: 254 ALQGQPLVLECIAEGFPTPSIKWLRPSGPM----PADRVTYQNHNKTLQLLNVAEEDDGE 309

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           Y C A NSLG      YV V A AP     P+      G+T  L C+V G P+PEV W  
Sbjct: 310 YRCLAENSLGSDRHTYYVTVEA-APYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRI 368

Query: 255 NQ---KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH-- 309
           N    +EL   +   ++ G L +++V  +D+    C ARN+ G    +  + V +     
Sbjct: 369 NGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKI 428

Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
           +T   E Y    G +A   C A   P    S+ WL        + E RF    + +L + 
Sbjct: 429 LTPDNETYMAVEGSTAYLLCKAFGAPVP--SVQWLDKEGKTVLQDE-RFFPYTNGTLGIR 485

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV------SW 423
                D+G Y C+A  + + +   A L V+   +          I+ K + V      S+
Sbjct: 486 DLQANDTGHYFCQAANDQNNVTIVANLQVKDATQITQGPQ--SAIEKKGSKVTFTCQASF 543

Query: 424 NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAF 483
           +P    S+     G  +Q + + D      +  +  G      VD       N++ V   
Sbjct: 544 DPSLQHSITWRGDGRNLQEFGDSD------KYFIEDGRLVIHSVD--YSDQGNYSCVAGT 595

Query: 484 NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQS 543
                   +E++   +P  VP    S   + L  S   L W   E  N  +  Y I+++ 
Sbjct: 596 ELDMVEGRAELLVVGSPGPVPHLELSDRHL-LKQSQVRLSWRPAEDHNAPIEKYDIEFED 654

Query: 544 VKGTKVGP----LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY 599
               ++ P     L ++P   + T+T+ KL+   P   Y   +    K G G  S     
Sbjct: 655 ---KEMAPEKWYSLGKVP--GNQTSTTLKLS---PYIHYTFRVTAINKYGPGEPSPASET 706

Query: 600 V------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQD 653
           V      P KNP +V+G G+  +N+VI+W  +  ++ NAP  +YR+ WR   T  AW + 
Sbjct: 707 VVTPEAAPEKNPVDVKGEGNETSNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGAWQEQ 766

Query: 654 DVLDWRQSELVLANQPTFQPYEIKV 678
            V D     LV++N  TF PYEIKV
Sbjct: 767 IVSD---PLLVVSNTSTFVPYEIKV 788



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 181/693 (26%), Positives = 269/693 (38%), Gaps = 88/693 (12%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI +G    +LI+ +V+ SD     CE  
Sbjct: 352  LDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRG----ALILSNVQPSDTMVTQCEAR 407

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN-GK 164
            N  G+  A +Y I +  L A   T + E   A E  T    CKA G P P + W+   GK
Sbjct: 408  NRHGLLLANAY-IYVVQLPAKILTPDNETYMAVEGSTAYLLCKAFGAPVPSVQWLDKEGK 466

Query: 165  PISQAPPNPRRKVGP---NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q       +  P     + I +L+ +DTG+Y C A N    V   +  N+ +  A +
Sbjct: 467  TVLQ-----DERFFPYTNGTLGIRDLQANDTGHYFCQAANDQNNV--TIVANLQVKDATQ 519

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWI---HNQKELTGGRYTILETGDLKIT 275
            IT+ P+      G  V  TC+    P  +  + W     N +E        +E G L I 
Sbjct: 520  ITQGPQSAIEKKGSKVTFTCQASFDPSLQHSITWRGDGRNLQEFGDSDKYFIEDGRLVIH 579

Query: 276  DVAFADSGEYTCFARNKLGTAQGSGSLTVK------EHTHITDQP--EDYEVEAGQSATF 327
             V ++D G Y+C A  +L   +G   L V        H  ++D+   +  +V        
Sbjct: 580  SVDYSDQGNYSCVAGTELDMVEGRAELLVVGSPGPVPHLELSDRHLLKQSQVRLSWRPAE 639

Query: 328  RCNAVSDPSLKLSIVWLRGSEPIDFESEPRF------VQSNDYSLTVTKSSELDSGQYTC 381
              NA   P  K  I      E  D E  P        V  N  S T+  S  +    YT 
Sbjct: 640  DHNA---PIEKYDI------EFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYI---HYTF 687

Query: 382  RAQTELDFIEAQ---ATLTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSPQSL 431
            R      +   +   A+ TV  P  AP        +D K         V++W P+     
Sbjct: 688  RVTAINKYGPGEPSPASETVVTPEAAPEK----NPVDVKGEGNETSNMVITWKPLRWMDW 743

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                  Y+VQ W  +   G+ +E IV+      +    FVP      +V A N    GP 
Sbjct: 744  NAPQVQYRVQ-WRPQGTRGAWQEQIVSDPLLVVSNTSTFVPYE---IKVQAVNSQGKGPE 799

Query: 492  SEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVKG 546
             +I    + E  P     +E I  L SSA  ++W  V P Q  G L GY + Y  +  + 
Sbjct: 800  PQITIGYSGEDYPQASPEMEGIKILNSSAVLVRWWPVDPAQVKGHLRGYNVTYWWEGSQR 859

Query: 547  TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPD 606
                  + R   +    TTSA L GL P + YR+ L  +   G G  S+  F  P   P 
Sbjct: 860  RHSKRHVHRGHVVVAANTTSAVLGGLRPYSSYRLELRAFNGRGLGPASEMTFSTPEGVPG 919

Query: 607  NVEG---RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSEL 663
            + E       +  +L++ W   P + HN     Y + +   + G+   +    D    EL
Sbjct: 920  HPEALHLECQSDTSLLLHW--QPPLSHNGVLTGYVLSYHPLDDGD--KEQLSFDLPDPEL 975

Query: 664  VLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
               N     P   Y  ++  T  E  GE  +RE
Sbjct: 976  RTHNLTNLSPHLRYRFQLQATTKEGPGEAIVRE 1008



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 147/585 (25%), Positives = 227/585 (38%), Gaps = 56/585 (9%)

Query: 44   VALRNKKVELFCIFGGTPLPQTIW-SKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
            +A+      L C   G P+P   W  K+G  +   +R      G +L I+ ++ +D G Y
Sbjct: 437  MAVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNG-TLGIRDLQANDTGHY 495

Query: 103  TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP--EPEIHWV 160
             C+ +N      +   +L V  A   T  P+     +   VTF C+AS  P  +  I W 
Sbjct: 496  FCQAANDQNNV-TIVANLQVKDATQITQGPQSAIEKKGSKVTFTCQASFDPSLQHSITWR 554

Query: 161  HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAH-AP 219
             +G+ + +   + +  +   R+ I ++  SD GNY C A   L  V     + V+    P
Sbjct: 555  GDGRNLQEFGDSDKYFIEDGRLVIHSVDYSDQGNYSCVAGTELDMVEGRAELLVVGSPGP 614

Query: 220  EITEAPKDEYTVDGKTVVLTCRV---FGAPKPEVNWIHNQKELTGGRYTILET--GDLKI 274
                   D + +    V L+ R      AP  + +     KE+   ++  L    G+   
Sbjct: 615  VPHLELSDRHLLKQSQVRLSWRPAEDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTS 674

Query: 275  TDVAFADSGEYT--CFARNKLGTAQGS--GSLTVKEHTHITDQPEDYEVEAGQSAT---- 326
            T +  +    YT    A NK G  + S      V         P D + E  +++     
Sbjct: 675  TTLKLSPYIHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETSNMVIT 734

Query: 327  ---FRCNAVSDPSLKLSIVW----LRGSEPIDFESEPRFVQSND-----YSLTVTKSSEL 374
                R    + P ++  + W     RG+      S+P  V SN      Y + V   +  
Sbjct: 735  WKPLRWMDWNAPQVQYRVQWRPQGTRGAWQEQIVSDPLLVVSNTSTFVPYEIKVQAVNSQ 794

Query: 375  DSGQYTCRAQTELDFIEAQATLTV---QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
              G             E Q T+       P  +P     I+++++   +V W PV P  +
Sbjct: 795  GKGP------------EPQITIGYSGEDYPQASPE-MEGIKILNSSAVLVRWWPVDPAQV 841

Query: 432  RGHFRGYKVQTWTE-----KDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
            +GH RGY V  W E            R  +V    +T+  +    P S     + AFNG 
Sbjct: 842  KGHLRGYNVTYWWEGSQRRHSKRHVHRGHVVVAANTTSAVLGGLRPYSSYRLELRAFNGR 901

Query: 487  YNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKG 546
              GP SE+ +F TPEGVPG  ++L       ++  L W  P   NGVL GY + Y  +  
Sbjct: 902  GLGPASEM-TFSTPEGVPGHPEALHLECQSDTSLLLHWQPPLSHNGVLTGYVLSYHPLDD 960

Query: 547  TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
                 L   LP   DP   +  L  L P  +YR  L   TK G G
Sbjct: 961  GDKEQLSFDLP---DPELRTHNLTNLSPHLRYRFQLQATTKEGPG 1002



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 169/403 (41%), Gaps = 36/403 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P +     + Q  +  S  I   + 
Sbjct: 43  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVHQAPHSGSFTITGNNS 102

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG+Y C  SN +G A S+ I L    AP +    V+P  +   E E+V   C  
Sbjct: 103 NFAQRFQGTYRCFASNKLGTAMSHEIQLMAEGAPKWPKEMVKP--VEVEEGESVILPCHP 160

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 161 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 218

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 219 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPSIKWLR 278

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++ +VA  D GEY C A N LG+ + +  +TV+   +   +
Sbjct: 279 PSGPMPADRVTYQNHNKTLQLLNVAEEDDGEYRCLAENSLGSDRHTYYVTVEAAPYWLHK 338

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++  ++ +  +    +L ++    
Sbjct: 339 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQP 396

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVPLE--APSNFTLIQV 413
            D+    C A+     + A A +  VQ+P +   P N T + V
Sbjct: 397 SDTMVTQCEARNRHGLLLANAYIYVVQLPAKILTPDNETYMAV 439


>gi|47227361|emb|CAF96910.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1154

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 124/388 (31%), Positives = 192/388 (49%), Gaps = 15/388 (3%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           ++ + + L CI  G P PQ  W K G  +     I   ++GK L +  VE  D G Y C+
Sbjct: 230 VKGEDLNLECIAAGFPTPQVEWVKMGQRLPTKATIE--SHGKLLFVPTVEQEDGGKYMCK 287

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             N +GEA  Y   ++V   P +  EPE   +     V  +C  SG P+P + W  NG  
Sbjct: 288 AKNTLGEAVHY-FTVTVEGPPEWVSEPESQLSMIGSDVLIKCSVSGTPQPTVTWRVNGNR 346

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEA 224
           + Q  P P R+V  + I + N + SD+  Y C A+N  G +  +  + ++   P I TE 
Sbjct: 347 L-QDSPAPNRRVLGDTIVLHNTKPSDSAVYQCEASNRHGTLLSNANIMIMNFPPMILTEN 405

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ--KELTGGRYTILETGDLKITDVAFADS 282
            +D   V+GK V++ C+VF +P P + W  +     + G R+++ + G L+I      D+
Sbjct: 406 DEDYSAVEGKRVMMHCKVFSSPSPTITWSKDDTSDSVDGPRFSVHDNGTLEIYRAEKEDA 465

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G YTCFA+N  G++  +  L+VK+ T I + PED  +  G +A F C A  D S      
Sbjct: 466 GPYTCFAKNTEGSSAINAMLSVKDPTRIVEPPEDSRILKGTTAQFSCLAEYDKSFSNDFE 525

Query: 341 IVWLRGSEPIDF---ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           I+W +  + I     E+   FV+  D  L +   S LD G YTC A+T +D  +A A L 
Sbjct: 526 ILWEKDDKEIAVNYTENSRYFVE--DGLLQIVNVSHLDKGVYTCLARTPMDGDKATALLL 583

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           V    +AP  + ++    +K   + W P
Sbjct: 584 VIDVPDAP-QYLVLSEHKSKSVKLKWIP 610



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 166/730 (22%), Positives = 272/730 (37%), Gaps = 102/730 (13%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQG 100
           + ++++    V + C   GTP P   W  +G  +  S   ++   G ++++ + + SD  
Sbjct: 314 ESQLSMIGSDVLIKCSVSGTPQPTVTWRVNGNRLQDSPAPNRRVLGDTIVLHNTKPSDSA 373

Query: 101 SYTCEVSNGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            Y CE SN  G   S + ++ ++  P    T   E  +A E + V   CK    P P I 
Sbjct: 374 VYQCEASNRHGTLLS-NANIMIMNFPPMILTENDEDYSAVEGKRVMMHCKVFSSPSPTIT 432

Query: 159 WVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAH 217
           W  +    S +   PR  V  N  + I    K D G Y C A N+ G    +  ++V   
Sbjct: 433 WSKDD--TSDSVDGPRFSVHDNGTLEIYRAEKEDAGPYTCFAKNTEGSSAINAMLSV-KD 489

Query: 218 APEITEAPKDEYTVDGKTVVLTC-----RVFGAPKPEVNWIHNQKELT-----GGRYTIL 267
              I E P+D   + G T   +C     + F +   E+ W  + KE+        RY  +
Sbjct: 490 PTRIVEPPEDSRILKGTTAQFSCLAEYDKSF-SNDFEILWEKDDKEIAVNYTENSRY-FV 547

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
           E G L+I +V+  D G YTC AR  +   + +  L V +   + D P+   +   +S + 
Sbjct: 548 EDGLLQIVNVSHLDKGVYTCLARTPMDGDKATALLLVID---VPDAPQYLVLSEHKSKSV 604

Query: 328 RCNAV----SDPSLKLSIVWLRGS--EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTC 381
           +   +     + S    I+    S  EP +++   R V  N  S  +     +D      
Sbjct: 605 KLKWIPGDDHNSSTTEFIIEYEESQREPGNWKELLR-VPGNHNSAILKLHGHVDYCFRVS 663

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSN---FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGY 438
                     +Q T   + P  AP        I+     +  ++W P+ P    G    Y
Sbjct: 664 GVNAVGRGPSSQPTERYRTPPAAPDKNPENIKIESHLPHEMDINWEPLLPIEQNGPGLEY 723

Query: 439 KVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
           KV ++  +D E   +E IV +          FVP      ++ A N    GP   I +  
Sbjct: 724 KV-SYRRQDVEEDWQEHIVKRHSFVVKNTPTFVPYE---IKIQARNHQGWGPEPRIATGY 779

Query: 499 TPEGVPGTVQSLEAIP-LGSSAFYLKWVK--PEQPNGVLMGYKIKYQ----SVKGTKVGP 551
           + E  P       A+  + SS   + W++   ++ +G L GY++  +    +++ T +G 
Sbjct: 780 SGEDFPSAAPDDVAVEVINSSVVKVSWMRVHKDKLHGHLGGYRVISEKQTFALRCTFIGL 839

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGR 611
            +  L  IS  T +SAK             L+  T       +    ++ F    N  G 
Sbjct: 840 SVTLLNTIS--TDSSAKY-----------QLSAQTTRRRKMWNSCFIFLHFLGMQNFSGS 886

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
              P    +S     +I                    +W       WR   LV       
Sbjct: 887 LKQPPFQKVSVCCSMQI--------------------SW-------WRLRSLV------- 912

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
                        K   G  +E +   G+     V    P S+    V+ FNG  NGP S
Sbjct: 913 -----------DSKKNHGK-KETLTFPGDRNHALVPGLTPFSEYSLIVMTFNGRGNGPGS 960

Query: 732 EIISFVTPEG 741
             +SF TPEG
Sbjct: 961 HPVSFKTPEG 970



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 89/375 (23%), Positives = 146/375 (38%), Gaps = 37/375 (9%)

Query: 55  CIFGGTPLPQTIWSKDGVPINP---SDRISQGNYGKSLIIKHVEFSD-QGSYTCEVSNGV 110
           C   G P PQ  W+K+G   +P      I + + G  +I  +   ++ QG Y C  SN +
Sbjct: 28  CEAKGNPEPQFRWTKNGQQFDPFLDPRLIKEEDSGTFVIPNNGNLTEYQGIYRCFASNVL 87

Query: 111 GEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECK-ASGLPEPEIHWVHNGKPI 166
           G A S  I+  V   P F   T++P  +   E +    +C    G+P  +I+W+      
Sbjct: 88  GTAISREIEFIVPNVPKFPKETIDPVVVE--EGQPFVLKCNPPDGIPPLQIYWMTISLQH 145

Query: 167 SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT----------NSLGYVYK-------D 209
            +        +  +      + K    +Y C A            ++  + K       +
Sbjct: 146 IEQDERVSTSLNGDLYFSHAVDKDSRRDYCCFAAFPRIRTIVQKTAMSVIVKTKKDASPE 205

Query: 210 VYVNVLAHAPEITEAP---KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
           V   +L   P I   P    +   V G+ + L C   G P P+V W+   + L   + TI
Sbjct: 206 VANAILQRRPSIMTPPGGKSEARLVKGEDLNLECIAAGFPTPQVEWVKMGQRLP-TKATI 264

Query: 267 LETGDLK-ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
              G L  +  V   D G+Y C A+N LG A    ++TV+       +PE      G   
Sbjct: 265 ESHGKLLFVPTVEQEDGGKYMCKAKNTLGEAVHYFTVTVEGPPEWVSEPESQLSMIGSDV 324

Query: 326 TFRCNAVSDPSLKLSIVW-LRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             +C+    P  + ++ W + G+   D  +  R V  +   L  TK S  DS  Y C A 
Sbjct: 325 LIKCSVSGTP--QPTVTWRVNGNRLQDSPAPNRRVLGDTIVLHNTKPS--DSAVYQCEAS 380

Query: 385 TELDFIEAQATLTVQ 399
                + + A + + 
Sbjct: 381 NRHGTLLSNANIMIM 395



 Score = 47.4 bits (111), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 117/300 (39%), Gaps = 48/300 (16%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPP--NPRRK--------VGPNRITIENLRK 189
           +E    +C+A G PEP+  W  NG+   Q  P  +PR          V PN   +   + 
Sbjct: 21  DENFPMKCEAKGNPEPQFRWTKNGQ---QFDPFLDPRLIKEEDSGTFVIPNNGNLTEYQ- 76

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPK 247
              G Y C A+N LG         ++ + P+  +   D   V +G+  VL C    G P 
Sbjct: 77  ---GIYRCFASNVLGTAISREIEFIVPNVPKFPKETIDPVVVEEGQPFVLKCNPPDGIPP 133

Query: 248 PEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS-GEYTCFAR-NKLGTAQGSGSLT 303
            ++ W  I  Q      R +    GDL  +     DS  +Y CFA   ++ T     +++
Sbjct: 134 LQIYWMTISLQHIEQDERVSTSLNGDLYFSHAVDKDSRRDYCCFAAFPRIRTIVQKTAMS 193

Query: 304 VKEHTHITDQPE--------------------DYEVEAGQSATFRCNAVSDPSLKLSIVW 343
           V   T     PE                    +  +  G+     C A   P+ ++   W
Sbjct: 194 VIVKTKKDASPEVANAILQRRPSIMTPPGGKSEARLVKGEDLNLECIAAGFPTPQVE--W 251

Query: 344 LRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE 403
           ++  + +  ++    ++S+   L V    + D G+Y C+A+  L       T+TV+ P E
Sbjct: 252 VKMGQRLPTKAT---IESHGKLLFVPTVEQEDGGKYMCKAKNTLGEAVHYFTVTVEGPPE 308


>gi|345807363|ref|XP_003435600.1| PREDICTED: neural cell adhesion molecule L1 isoform 2 [Canis lupus
           familiaris]
          Length = 1247

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 215/469 (45%), Gaps = 15/469 (3%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L + +V   D G Y 
Sbjct: 248 VALQGQPLVLECIAEGFPTPSIKWLRPSGPM-PADRVTYQNHNKTLQLLNVAEEDDGEYR 306

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G  + ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 307 CLAENSLGSDR-HTYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 365

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 366 IPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 425

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
              + Y  V+G T  L C+ FGAP P V W+  + +  L   R+     G L I D+   
Sbjct: 426 PDNETYMAVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQAN 485

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P+    + G   TF C A  DPSL+ S
Sbjct: 486 DTGHYFCQAANDQNNVTIVANLQVKDATQITQGPQSAIEKKGSKVTFTCQASFDPSLQHS 545

Query: 341 IVWL-RGSEPIDF-ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA-TLT 397
           I W   G    +F +S+  F++  D  L +      D G Y+C A TELD +E +A  L 
Sbjct: 546 ITWRGDGRNLQEFGDSDKYFIE--DGRLVIHSVDYSDQGNYSCVAGTELDMVEGRAELLV 603

Query: 398 VQVPLEAPS-NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
           V  P   P    +   ++   +  +SW P   +        Y ++   ++        L 
Sbjct: 604 VGSPGPVPHLELSDRHLLKQSQVRLSWRPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLG 661

Query: 457 VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVP 504
              G  T+T + K  P      RV A N    G PS    + VTPE  P
Sbjct: 662 KVPGNQTSTTL-KLSPYIHYTFRVTAINKYGPGEPSPASETVVTPEAAP 709



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 152/565 (26%), Positives = 237/565 (41%), Gaps = 53/565 (9%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--NLRKSDTGN 194
           A + + +  EC A G P P I W+    P+    P  R     +  T++  N+ + D G 
Sbjct: 249 ALQGQPLVLECIAEGFPTPSIKWLRPSGPM----PADRVTYQNHNKTLQLLNVAEEDDGE 304

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           Y C A NSLG      YV V A AP     P+      G+T  L C+V G P+PEV W  
Sbjct: 305 YRCLAENSLGSDRHTYYVTVEA-APYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRI 363

Query: 255 NQ---KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH-- 309
           N    +EL   +   ++ G L +++V  +D+    C ARN+ G    +  + V +     
Sbjct: 364 NGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKI 423

Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
           +T   E Y    G +A   C A   P    S+ WL        + E RF    + +L + 
Sbjct: 424 LTPDNETYMAVEGSTAYLLCKAFGAPVP--SVQWLDKEGKTVLQDE-RFFPYTNGTLGIR 480

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV------SW 423
                D+G Y C+A  + + +   A L V+   +          I+ K + V      S+
Sbjct: 481 DLQANDTGHYFCQAANDQNNVTIVANLQVKDATQITQGPQ--SAIEKKGSKVTFTCQASF 538

Query: 424 NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAF 483
           +P    S+     G  +Q + + D      +  +  G      VD       N++ V   
Sbjct: 539 DPSLQHSITWRGDGRNLQEFGDSD------KYFIEDGRLVIHSVD--YSDQGNYSCVAGT 590

Query: 484 NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQS 543
                   +E++   +P  VP    S   + L  S   L W   E  N  +  Y I+++ 
Sbjct: 591 ELDMVEGRAELLVVGSPGPVPHLELSDRHL-LKQSQVRLSWRPAEDHNAPIEKYDIEFED 649

Query: 544 VKGTKVGP----LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY 599
               ++ P     L ++P   + T+T+ KL+   P   Y   +    K G G  S     
Sbjct: 650 ---KEMAPEKWYSLGKVP--GNQTSTTLKLS---PYIHYTFRVTAINKYGPGEPSPASET 701

Query: 600 V------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQD 653
           V      P KNP +V+G G+  +N+VI+W  +  ++ NAP  +YR+ WR   T  AW + 
Sbjct: 702 VVTPEAAPEKNPVDVKGEGNETSNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGAWQEQ 761

Query: 654 DVLDWRQSELVLANQPTFQPYEIKV 678
            V D     LV++N  TF PYEIKV
Sbjct: 762 IVSD---PLLVVSNTSTFVPYEIKV 783



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 181/693 (26%), Positives = 269/693 (38%), Gaps = 88/693 (12%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI +G    +LI+ +V+ SD     CE  
Sbjct: 347  LDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRG----ALILSNVQPSDTMVTQCEAR 402

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN-GK 164
            N  G+  A +Y I +  L A   T + E   A E  T    CKA G P P + W+   GK
Sbjct: 403  NRHGLLLANAY-IYVVQLPAKILTPDNETYMAVEGSTAYLLCKAFGAPVPSVQWLDKEGK 461

Query: 165  PISQAPPNPRRKVGP---NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q       +  P     + I +L+ +DTG+Y C A N    V   +  N+ +  A +
Sbjct: 462  TVLQ-----DERFFPYTNGTLGIRDLQANDTGHYFCQAANDQNNV--TIVANLQVKDATQ 514

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWI---HNQKELTGGRYTILETGDLKIT 275
            IT+ P+      G  V  TC+    P  +  + W     N +E        +E G L I 
Sbjct: 515  ITQGPQSAIEKKGSKVTFTCQASFDPSLQHSITWRGDGRNLQEFGDSDKYFIEDGRLVIH 574

Query: 276  DVAFADSGEYTCFARNKLGTAQGSGSLTVK------EHTHITDQP--EDYEVEAGQSATF 327
             V ++D G Y+C A  +L   +G   L V        H  ++D+   +  +V        
Sbjct: 575  SVDYSDQGNYSCVAGTELDMVEGRAELLVVGSPGPVPHLELSDRHLLKQSQVRLSWRPAE 634

Query: 328  RCNAVSDPSLKLSIVWLRGSEPIDFESEPRF------VQSNDYSLTVTKSSELDSGQYTC 381
              NA   P  K  I      E  D E  P        V  N  S T+  S  +    YT 
Sbjct: 635  DHNA---PIEKYDI------EFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYI---HYTF 682

Query: 382  RAQTELDFIEAQ---ATLTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSPQSL 431
            R      +   +   A+ TV  P  AP        +D K         V++W P+     
Sbjct: 683  RVTAINKYGPGEPSPASETVVTPEAAPEK----NPVDVKGEGNETSNMVITWKPLRWMDW 738

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                  Y+VQ W  +   G+ +E IV+      +    FVP      +V A N    GP 
Sbjct: 739  NAPQVQYRVQ-WRPQGTRGAWQEQIVSDPLLVVSNTSTFVPYE---IKVQAVNSQGKGPE 794

Query: 492  SEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVKG 546
             +I    + E  P     +E I  L SSA  ++W  V P Q  G L GY + Y  +  + 
Sbjct: 795  PQITIGYSGEDYPQASPEMEGIKILNSSAVLVRWWPVDPAQVKGHLRGYNVTYWWEGSQR 854

Query: 547  TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPD 606
                  + R   +    TTSA L GL P + YR+ L  +   G G  S+  F  P   P 
Sbjct: 855  RHSKRHVHRGHVVVAANTTSAVLGGLRPYSSYRLELRAFNGRGLGPASEMTFSTPEGVPG 914

Query: 607  NVEG---RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSEL 663
            + E       +  +L++ W   P + HN     Y + +   + G+   +    D    EL
Sbjct: 915  HPEALHLECQSDTSLLLHW--QPPLSHNGVLTGYVLSYHPLDDGD--KEQLSFDLPDPEL 970

Query: 664  VLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
               N     P   Y  ++  T  E  GE  +RE
Sbjct: 971  RTHNLTNLSPHLRYRFQLQATTKEGPGEAIVRE 1003



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 147/585 (25%), Positives = 227/585 (38%), Gaps = 56/585 (9%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIW-SKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           +A+      L C   G P+P   W  K+G  +   +R      G +L I+ ++ +D G Y
Sbjct: 432 MAVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNG-TLGIRDLQANDTGHY 490

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP--EPEIHWV 160
            C+ +N      +   +L V  A   T  P+     +   VTF C+AS  P  +  I W 
Sbjct: 491 FCQAANDQNNV-TIVANLQVKDATQITQGPQSAIEKKGSKVTFTCQASFDPSLQHSITWR 549

Query: 161 HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAH-AP 219
            +G+ + +   + +  +   R+ I ++  SD GNY C A   L  V     + V+    P
Sbjct: 550 GDGRNLQEFGDSDKYFIEDGRLVIHSVDYSDQGNYSCVAGTELDMVEGRAELLVVGSPGP 609

Query: 220 EITEAPKDEYTVDGKTVVLTCRV---FGAPKPEVNWIHNQKELTGGRYTILET--GDLKI 274
                  D + +    V L+ R      AP  + +     KE+   ++  L    G+   
Sbjct: 610 VPHLELSDRHLLKQSQVRLSWRPAEDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTS 669

Query: 275 TDVAFADSGEYT--CFARNKLGTAQGS--GSLTVKEHTHITDQPEDYEVEAGQSAT---- 326
           T +  +    YT    A NK G  + S      V         P D + E  +++     
Sbjct: 670 TTLKLSPYIHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETSNMVIT 729

Query: 327 ---FRCNAVSDPSLKLSIVW----LRGSEPIDFESEPRFVQSND-----YSLTVTKSSEL 374
               R    + P ++  + W     RG+      S+P  V SN      Y + V   +  
Sbjct: 730 WKPLRWMDWNAPQVQYRVQWRPQGTRGAWQEQIVSDPLLVVSNTSTFVPYEIKVQAVNSQ 789

Query: 375 DSGQYTCRAQTELDFIEAQATLTV---QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
             G             E Q T+       P  +P     I+++++   +V W PV P  +
Sbjct: 790 GKGP------------EPQITIGYSGEDYPQASPE-MEGIKILNSSAVLVRWWPVDPAQV 836

Query: 432 RGHFRGYKVQTWTE-----KDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
           +GH RGY V  W E            R  +V    +T+  +    P S     + AFNG 
Sbjct: 837 KGHLRGYNVTYWWEGSQRRHSKRHVHRGHVVVAANTTSAVLGGLRPYSSYRLELRAFNGR 896

Query: 487 YNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKG 546
             GP SE+ +F TPEGVPG  ++L       ++  L W  P   NGVL GY + Y  +  
Sbjct: 897 GLGPASEM-TFSTPEGVPGHPEALHLECQSDTSLLLHWQPPLSHNGVLTGYVLSYHPLDD 955

Query: 547 TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
                L   LP   DP   +  L  L P  +YR  L   TK G G
Sbjct: 956 GDKEQLSFDLP---DPELRTHNLTNLSPHLRYRFQLQATTKEGPG 997



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 169/403 (41%), Gaps = 36/403 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P +     + Q  +  S  I   + 
Sbjct: 38  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVHQAPHSGSFTITGNNS 97

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG+Y C  SN +G A S+ I L    AP +    V+P  +   E E+V   C  
Sbjct: 98  NFAQRFQGTYRCFASNKLGTAMSHEIQLMAEGAPKWPKEMVKP--VEVEEGESVILPCHP 155

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 156 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 213

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 214 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPSIKWLR 273

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++ +VA  D GEY C A N LG+ + +  +TV+   +   +
Sbjct: 274 PSGPMPADRVTYQNHNKTLQLLNVAEEDDGEYRCLAENSLGSDRHTYYVTVEAAPYWLHK 333

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++  ++ +  +    +L ++    
Sbjct: 334 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQP 391

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVPLE--APSNFTLIQV 413
            D+    C A+     + A A +  VQ+P +   P N T + V
Sbjct: 392 SDTMVTQCEARNRHGLLLANAYIYVVQLPAKILTPDNETYMAV 434


>gi|184185488|gb|ACC68891.1| neural cell adhesion molecule L1 precursor (predicted) [Rhinolophus
           ferrumequinum]
          Length = 1260

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 135/472 (28%), Positives = 217/472 (45%), Gaps = 21/472 (4%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P +R++  N+ K+L ++ V   D G Y 
Sbjct: 255 VALQEQTLVLECIAEGFPTPTIKWLRPSGPM-PPNRVTYQNHNKTLQLRDVREEDDGEYR 313

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G  + ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 314 CVAENSLGSDR-HAYYVTVEAAPYWLHKPQSRLYGPGETARLDCQVQGRPQPEVTWRING 372

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 373 IPVEELAKDQKYRIQHGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 432

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
              + Y  V+G T  L C+ FGAP P V W+  + +  L   R+     G L I D+   
Sbjct: 433 PDNETYLAVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQAN 492

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T I  +P++   + G   TF C A  DPSL+ S
Sbjct: 493 DTGHYFCQAANDQNNVTIVANLQVKDATQIIQEPQNAIEKKGSRVTFTCQASFDPSLQHS 552

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W R    +    +S+  F++  D  L +      D G Y+C A T+LD +E +A L V
Sbjct: 553 ITWRRDGRNLQELGDSDKYFIE--DERLVIHSLDYSDQGNYSCVASTKLDVVERRAKLLV 610

Query: 399 QVPLEAPSNFTLIQVID-----AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
              + +P     +++ D       +  +SW+P    +       Y ++   ++       
Sbjct: 611 ---VGSPGPVPRLELSDHHPPKQNQVQLSWSPADDHN--SPIEKYDIEFEDQEMEPDKWY 665

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVP 504
            L    G  T+T + K  P  +   RV A N    G PS      VTPE  P
Sbjct: 666 SLGKVPGNQTSTTL-KLSPYVRYTFRVTAINKYGPGEPSPASEPVVTPEAAP 716



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 162/576 (28%), Positives = 251/576 (43%), Gaps = 75/576 (13%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNY 195
           A +E+T+  EC A G P P I W+   +P    PPN       N+ + + ++R+ D G Y
Sbjct: 256 ALQEQTLVLECIAEGFPTPTIKWL---RPSGPMPPNRVTYQNHNKTLQLRDVREEDDGEY 312

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            C A NSLG      YV V A AP     P+      G+T  L C+V G P+PEV W  N
Sbjct: 313 RCVAENSLGSDRHAYYVTVEA-APYWLHKPQSRLYGPGETARLDCQVQGRPQPEVTWRIN 371

Query: 256 Q---KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--I 310
               +EL   +   ++ G L +++V  +D+    C ARN+ G    +  + V +     +
Sbjct: 372 GIPVEELAKDQKYRIQHGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKIL 431

Query: 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTK 370
           T   E Y    G +A   C A   P    S+ WL        + E RF    + +L +  
Sbjct: 432 TPDNETYLAVEGSTAYLLCKAFGAPVP--SVQWLDKEGKTVLQDE-RFFPYTNGTLGIRD 488

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVV------ 421
               D+G Y C+A  + + +   A L V+     ++ P N      I+ K + V      
Sbjct: 489 LQANDTGHYFCQAANDQNNVTIVANLQVKDATQIIQEPQN-----AIEKKGSRVTFTCQA 543

Query: 422 SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 481
           S++P    S+          TW  +DG  +++EL     +    E ++ V  S +++   
Sbjct: 544 SFDPSLQHSI----------TW-RRDGR-NLQEL--GDSDKYFIEDERLVIHSLDYSD-- 587

Query: 482 AFNGAYNGPPSEIISFVTPE------GVPGTVQSLEAI---PLGSSAFYLKWVKPEQPNG 532
              G Y+   S  +  V         G PG V  LE     P   +   L W   +  N 
Sbjct: 588 --QGNYSCVASTKLDVVERRAKLLVVGSPGPVPRLELSDHHPPKQNQVQLSWSPADDHNS 645

Query: 533 VLMGYKIKYQSVKGTKVGP----LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
            +  Y I+++     ++ P     L ++P   + T+T+ KL+   P  +Y   +    K 
Sbjct: 646 PIEKYDIEFED---QEMEPDKWYSLGKVP--GNQTSTTLKLS---PYVRYTFRVTAINKY 697

Query: 589 GDGAESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G G  S     V      P KNP +V+G G+  NN+VI+W  +  ++ NAP  +YR+ WR
Sbjct: 698 GPGEPSPASEPVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRWMDWNAPQVQYRVQWR 757

Query: 643 RHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
              T  AW +  V D     LV++N  TF PYEIKV
Sbjct: 758 LQGTRGAWQEQIVSD---PFLVVSNTSTFVPYEIKV 790



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 171/694 (24%), Positives = 267/694 (38%), Gaps = 89/694 (12%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI  G    +LI+ +V+ SD     CE  
Sbjct: 354  LDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQHG----ALILSNVQPSDTMVTQCEAR 409

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN-GK 164
            N  G+  A +Y I +  L A   T + E   A E  T    CKA G P P + W+   GK
Sbjct: 410  NRHGLLLANAY-IYVVQLPAKILTPDNETYLAVEGSTAYLLCKAFGAPVPSVQWLDKEGK 468

Query: 165  PISQAPPNPRRKVGP---NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q       +  P     + I +L+ +DTG+Y C A N    V   +  N+ +  A +
Sbjct: 469  TVLQD-----ERFFPYTNGTLGIRDLQANDTGHYFCQAANDQNNV--TIVANLQVKDATQ 521

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWIH---NQKELTGGRYTILETGDLKIT 275
            I + P++     G  V  TC+    P  +  + W     N +EL       +E   L I 
Sbjct: 522  IIQEPQNAIEKKGSRVTFTCQASFDPSLQHSITWRRDGRNLQELGDSDKYFIEDERLVIH 581

Query: 276  DVAFADSGEYTCFARNKLGTAQGSGSLTVK------EHTHITDQ--PEDYEVEAGQSATF 327
             + ++D G Y+C A  KL   +    L V           ++D   P+  +V+   S   
Sbjct: 582  SLDYSDQGNYSCVASTKLDVVERRAKLLVVGSPGPVPRLELSDHHPPKQNQVQLSWSPAD 641

Query: 328  RCNAVSDPSLKLSIVWLRGSEPIDFESEPRF------VQSNDYSLTVTKSSELDSGQYTC 381
              N+   P  K  I      E  D E EP        V  N  S T+  S  +   +YT 
Sbjct: 642  DHNS---PIEKYDI------EFEDQEMEPDKWYSLGKVPGNQTSTTLKLSPYV---RYTF 689

Query: 382  RAQTELDFIEAQ---ATLTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSPQSL 431
            R      +   +   A+  V  P  AP        +D K         V++W P+     
Sbjct: 690  RVTAINKYGPGEPSPASEPVVTPEAAPEK----NPVDVKGEGNETNNMVITWKPLRWMDW 745

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                  Y+VQ W  +   G+ +E IV+      +    FVP      +V A N    GP 
Sbjct: 746  NAPQVQYRVQ-WRLQGTRGAWQEQIVSDPFLVVSNTSTFVPYE---IKVQAINSHGKGPE 801

Query: 492  SEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVKG 546
             ++    + E  P    +LE I  L SSA  +KW  V P Q  G L GY + Y  +  + 
Sbjct: 802  PQVTIGYSGEDYPQAWPALEDIKILNSSAVLVKWLPVDPAQVKGHLRGYNVTYRWEGSQR 861

Query: 547  TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPF--- 602
             +    + +   +    TTS  L  L P + Y + +  +   G G A     F  P    
Sbjct: 862  KQSRRHVHKDHMLVPANTTSIILGNLRPYSFYHLEVQAFNSRGLGPASENRTFSTPEGVP 921

Query: 603  KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
              P+ +     +  +L++ W   P + HN     Y + +   + G    +    +    E
Sbjct: 922  SQPEELHLECQSDTSLLLHW--QPPVSHNGVLTGYVLSYHPLDDGSM--EQLSFNLSDPE 977

Query: 663  LVLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
            L + N     P   Y  ++  T  +  GE  ++E
Sbjct: 978  LRMHNLTNLSPHLRYRFQLQATTKQGPGEAIVQE 1011



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 98/403 (24%), Positives = 168/403 (41%), Gaps = 36/403 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P +     + Q  +  S  I   + 
Sbjct: 45  QRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVHQAPHSGSFTITGNNS 104

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG+Y C  SN +G A S+ I L    AP +   TV+P  +   E E+V   C  
Sbjct: 105 NFAQRFQGTYRCFASNKLGTAMSHEIQLMAEGAPKWPKETVKP--VEVEEGESVILPCHP 162

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 163 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 220

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEYTVDG---------KTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +  +          +T+VL C   G P P + W+ 
Sbjct: 221 IIQKEPIDLRVKATNSMIDRRPRLLFPANASSHLVALQEQTLVLECIAEGFPTPTIKWLR 280

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++ DV   D GEY C A N LG+ + +  +TV+   +   +
Sbjct: 281 PSGPMPPNRVTYQNHNKTLQLRDVREEDDGEYRCVAENSLGSDRHAYYVTVEAAPYWLHK 340

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+      G++A   C     P  +  + W     P++  ++ +  +    +L ++    
Sbjct: 341 PQSRLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELAKDQKYRIQHGALILSNVQP 398

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP--LEAPSNFTLIQV 413
            D+    C A+     + A A +  VQ+P  +  P N T + V
Sbjct: 399 SDTMVTQCEARNRHGLLLANAYIYVVQLPAKILTPDNETYLAV 441



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 125/307 (40%), Gaps = 60/307 (19%)

Query: 122 VLAAPYFTVE-PEFINAAEEETVTFECKASGLPEPEIHWVHNG---KP-------ISQAP 170
           V+  P  T E P+ +     + ++ +C+ASG PE +  W  +G   KP       + QAP
Sbjct: 33  VMEPPVITEESPQRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVHQAP 92

Query: 171 PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEAPKDEY 229
            +    +  N     N  +   G Y C A+N LG         +   AP+   E  K   
Sbjct: 93  HSGSFTITGNN---SNFAQRFQGTYRCFASNKLGTAMSHEIQLMAEGAPKWPKETVKPVE 149

Query: 230 TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL---TGGRYTILETGDLKITDVAFADS-GEY 285
             +G++V+L C    + +P   +  N K L      R T+ + G+L   +V  +D+  +Y
Sbjct: 150 VEEGESVILPCHPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDY 209

Query: 286 TCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS-------------ATFRCNAV 332
            C        A   G+ T+     I  +P D  V+A  S             A+    A+
Sbjct: 210 ICH-------AHFPGTRTI-----IQKEPIDLRVKATNSMIDRRPRLLFPANASSHLVAL 257

Query: 333 SDPSLKL----------SIVWLRGSEPIDFESEPRFV--QSNDYSLTVTKSSELDSGQYT 380
            + +L L          +I WLR S P+     P  V  Q+++ +L +    E D G+Y 
Sbjct: 258 QEQTLVLECIAEGFPTPTIKWLRPSGPM----PPNRVTYQNHNKTLQLRDVREEDDGEYR 313

Query: 381 CRAQTEL 387
           C A+  L
Sbjct: 314 CVAENSL 320



 Score = 39.3 bits (90), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 79/195 (40%), Gaps = 23/195 (11%)

Query: 207 YKDVYVNVLAHAPEITE-APKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN------QKEL 259
           YKD   +V+   P ITE +P+         + L C   G P+ +  W  +      ++EL
Sbjct: 26  YKDEGHHVM-EPPVITEESPQRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEEL 84

Query: 260 TGGRYTILETGDLKIT--DVAFAD--SGEYTCFARNKLGTAQGSGSLTVKEHT----HIT 311
               +    +G   IT  +  FA    G Y CFA NKLGTA       + E        T
Sbjct: 85  GVTVHQAPHSGSFTITGNNSNFAQRFQGTYRCFASNKLGTAMSHEIQLMAEGAPKWPKET 144

Query: 312 DQPEDYEVEAGQSATFRCNAVSDPSLK-LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTK 370
            +P   EVE G+S    C+    PS + L I W+  S+ +  + + R     + +L    
Sbjct: 145 VKP--VEVEEGESVILPCHP--PPSAEPLRIYWM-NSKILHIKQDERVTMGQNGNLYFAN 199

Query: 371 SSELDS-GQYTCRAQ 384
               D+   Y C A 
Sbjct: 200 VLTSDNHSDYICHAH 214


>gi|395860585|ref|XP_003802591.1| PREDICTED: neural cell adhesion molecule L1 isoform 2 [Otolemur
           garnettii]
          Length = 1253

 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 140/470 (29%), Positives = 214/470 (45%), Gaps = 17/470 (3%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L + +V   D G Y 
Sbjct: 253 VALQGEPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLNVGEEDDGEYR 311

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 312 CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 370

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ + P + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 371 IPVEELPKDQKYQIQRGALILSNVQPSDTMVTQCEARNRHGVLLANAYIYVVQLPAKILT 430

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
                Y  V+G T  L C+ FGAP P V W+  +    L   R+     G L I D+   
Sbjct: 431 GDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLGEEGMTVLQDERFFPYANGTLGIRDLQAN 490

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T I   P     + G   TF C A  DPSL+ S
Sbjct: 491 DTGRYFCQAANDQNNVTIVANLQVKDATRIVQGPRSAIEKKGSRVTFTCQASFDPSLQPS 550

Query: 341 IVWLRGSEPIDFE---SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT-L 396
           I W RG      E   S+  F++  D  L +      D G Y+C A TELD +E++A  L
Sbjct: 551 ITW-RGDGGDLHELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCLASTELDMVESKAQLL 607

Query: 397 TVQVPLEAPS-NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIREL 455
            V  P   P    + + ++   +  +SW+P    +       Y ++   ++        L
Sbjct: 608 VVGSPGLVPQLKLSDLHLLKQSQVRLSWSPAEDHN--APIEKYDIEFEDKEMAPEKWYSL 665

Query: 456 IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVP 504
               G  T+  + K  P      RV A N    G PS    + VTPE  P
Sbjct: 666 GKVPGNQTSATL-KLSPYVHYTFRVTAINKYGPGEPSPASETVVTPEAAP 714



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 157/572 (27%), Positives = 240/572 (41%), Gaps = 67/572 (11%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--NLRKSDTGN 194
           A + E +  EC A G P P I W+    P+    P  R     +  T++  N+ + D G 
Sbjct: 254 ALQGEPLVLECIAEGFPTPTIKWLRPSGPM----PADRVTYQNHNKTLQLLNVGEEDDGE 309

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           Y C A NSLG      YV V A AP     P+      G+T  L C+V G P+PEV W  
Sbjct: 310 YRCLAENSLGSARHAYYVTVEA-APYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRI 368

Query: 255 NQ---KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH-- 309
           N    +EL   +   ++ G L +++V  +D+    C ARN+ G    +  + V +     
Sbjct: 369 NGIPVEELPKDQKYQIQRGALILSNVQPSDTMVTQCEARNRHGVLLANAYIYVVQLPAKI 428

Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
           +T   + Y    G +A   C A   P    S+ WL G E +    + RF    + +L + 
Sbjct: 429 LTGDNQTYMAVEGSTAYLLCKAFGAPVP--SVQWL-GEEGMTVLQDERFFPYANGTLGIR 485

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ----VIDAKKAVVSWNP 425
                D+G+Y C+A  +      Q  +T+   L+      ++Q     I+ K + V++  
Sbjct: 486 DLQANDTGRYFCQAAND------QNNVTIVANLQVKDATRIVQGPRSAIEKKGSRVTF-- 537

Query: 426 VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNG 485
               + +  F      + T +   G + EL     +    E  + V  S +++      G
Sbjct: 538 ----TCQASFDPSLQPSITWRGDGGDLHEL--GDSDKYFIEDGRLVIHSLDYSD----QG 587

Query: 486 AYNGPPSEIISFVTPE------GVPGTVQSLEAIPL---GSSAFYLKWVKPEQPNGVLMG 536
            Y+   S  +  V  +      G PG V  L+   L     S   L W   E  N  +  
Sbjct: 588 NYSCLASTELDMVESKAQLLVVGSPGLVPQLKLSDLHLLKQSQVRLSWSPAEDHNAPIEK 647

Query: 537 YKIKYQSVKGTKVGP----LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 592
           Y I+++     ++ P     L ++P       TSA L  L P   Y   +    K G G 
Sbjct: 648 YDIEFED---KEMAPEKWYSLGKVP----GNQTSATLK-LSPYVHYTFRVTAINKYGPGE 699

Query: 593 ESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
            S     V      P KNP +V+G G+  NN+VI+W  +  I+ NAP  +YR+ WR   T
Sbjct: 700 PSPASETVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRWIDWNAPQVQYRVQWRPQGT 759

Query: 647 GEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
              W +  V D     LV++N  TF PYEIKV
Sbjct: 760 RGIWQEQIVSD---PFLVVSNTSTFVPYEIKV 788



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 166/684 (24%), Positives = 257/684 (37%), Gaps = 70/684 (10%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPIN--PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN-- 108
            L C   G P P+  W  +G+P+   P D+  Q   G +LI+ +V+ SD     CE  N  
Sbjct: 352  LDCQVQGRPQPEVTWRINGIPVEELPKDQKYQIQRG-ALILSNVQPSDTMVTQCEARNRH 410

Query: 109  GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGKPIS 167
            GV  A +Y I +  L A   T + +   A E  T    CKA G P P + W+   G  + 
Sbjct: 411  GVLLANAY-IYVVQLPAKILTGDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLGEEGMTVL 469

Query: 168  QAPPNPRRKVGP---NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPEITE 223
            Q       +  P     + I +L+ +DTG Y C A N    V   +  N+ +  A  I +
Sbjct: 470  Q-----DERFFPYANGTLGIRDLQANDTGRYFCQAANDQNNV--TIVANLQVKDATRIVQ 522

Query: 224  APKDEYTVDGKTVVLTCRVFGAP--KPEVNWIHN---QKELTGGRYTILETGDLKITDVA 278
             P+      G  V  TC+    P  +P + W  +     EL       +E G L I  + 
Sbjct: 523  GPRSAIEKKGSRVTFTCQASFDPSLQPSITWRGDGGDLHELGDSDKYFIEDGRLVIHSLD 582

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            ++D G Y+C A  +L   +    L V     +  Q +  ++   + +  R +        
Sbjct: 583  YSDQGNYSCLASTELDMVESKAQLLVVGSPGLVPQLKLSDLHLLKQSQVRLSWSPAEDHN 642

Query: 339  LSIVWLRGSEPIDFESEPRFVQSND-YSLTVTKSSELDSG-------QYTCRAQTELDFI 390
              I      E  D E E + +     YSL     ++  +         YT R      + 
Sbjct: 643  API------EKYDIEFEDKEMAPEKWYSLGKVPGNQTSATLKLSPYVHYTFRVTAINKYG 696

Query: 391  EAQ---ATLTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSPQSLRGHFRGYKV 440
              +   A+ TV  P  AP        +D K         V++W P+           Y+V
Sbjct: 697  PGEPSPASETVVTPEAAPEK----NPVDVKGEGNETNNMVITWKPLRWIDWNAPQVQYRV 752

Query: 441  QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 500
            Q W  +   G  +E IV+      +    FVP      +V A N    GP  ++    + 
Sbjct: 753  Q-WRPQGTRGIWQEQIVSDPFLVVSNTSTFVPYE---IKVQAVNSQGKGPEPQVTIGYSG 808

Query: 501  EGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVKGTKVGPLLER 555
            E  P     LE I  L SS   ++W  V   Q  G L GY + Y  +  +       + +
Sbjct: 809  EDYPQASPELEGIQILNSSTVLVRWWPVDLAQVKGHLRGYSVTYWWERSQRKHSKRHVHK 868

Query: 556  LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF---KNPDNVEGRG 612
               I    TTS  L GL P + Y + +  +   G G   +  F  P     +P+ +    
Sbjct: 869  GHVIVPANTTSVILGGLRPYSSYHLEVKAFNGRGPGPALELTFSTPEGVPGHPEALHLEC 928

Query: 613  STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
             +  +L++ W   P + HN     Y + +  H   E   +    D    EL   N     
Sbjct: 929  QSNTSLLLHW--QPPLSHNGVLTGYVLSY--HPLDEGGKEQLSFDLPDPELRTHNLTNLS 984

Query: 673  P---YEIKVVQTWTEKDGEGSIRE 693
            P   Y  ++  T  E  GE  +RE
Sbjct: 985  PYLRYRFQLQATTKEGPGEAIVRE 1008



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 162/389 (41%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W+KDG+   P +     + Q  +  S  I   + 
Sbjct: 43  RRLVVFPTDDISLKCEASGKPEVQFRWTKDGIHFQPKEELGVTVQQLPHSGSFTITGNNS 102

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P  +   E E+V   C  
Sbjct: 103 NFAQRFQGIYRCFASNKLGTAMSHKIQLMAEGAPKWPKETVKP--VEVEEGESVILPCHP 160

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 161 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVITSDNHSDYICHAHFPGTRT 218

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 219 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGEPLVLECIAEGFPTPTIKWLR 278

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++ +V   D GEY C A N LG+A+ +  +TV+   +   +
Sbjct: 279 PSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHK 338

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++   + +  Q    +L ++    
Sbjct: 339 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELPKDQKYQIQRGALILSNVQP 396

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A+     + A A +  VQ+P
Sbjct: 397 SDTMVTQCEARNRHGVLLANAYIYVVQLP 425


>gi|348517086|ref|XP_003446066.1| PREDICTED: neural cell adhesion molecule L1-like [Oreochromis
           niloticus]
          Length = 1548

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 195/394 (49%), Gaps = 22/394 (5%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           AL+   V L C+  G P P+  W K DGV  + + ++   N+ + L    +   D G Y 
Sbjct: 516 ALKGNSVTLECLPKGLPTPKVEWKKKDGVLADTTGQVI--NFDRWLHFDSITLDDDGEYE 573

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C+ SN  G + + S  ++V AAPY+  EP+ +     ETV  +C+A G+P P I W  NG
Sbjct: 574 CKASNAHG-SITRSFTVTVEAAPYWVKEPQNLMYTPGETVRLDCQADGVPRPSITWRING 632

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + +++    PRR V    + ++++   DT  Y C A N  G +  + Y+ V+   P+I  
Sbjct: 633 QLLTEVDEEPRRTVTGGTLIMKDVNIGDTAVYQCEAKNGHGSILLNTYLYVVELPPQILS 692

Query: 224 APKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQKELTGG---------RYTILETGDLK 273
                Y V  G+ V L C  FG+P+P V W    +E TG          R +IL  G LK
Sbjct: 693 PDGFIYNVTKGRDVALHCESFGSPRPRVTW---DREDTGALLSDPLLYPRISILTNGTLK 749

Query: 274 ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVS 333
           ++DV+  DSGEY C  +N       +  L V   + I   P+   V  G+SA   C+  +
Sbjct: 750 LSDVSHNDSGEYICSVQNT--NISITAKLDVFRPSEILTGPQAVRVVQGESAFLDCDVDT 807

Query: 334 DPSLK-LSIVWLRGSEPIDFES-EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           DP L+   +VW +G+  ++  S + ++    + +L VT     DS +Y+C   T++D + 
Sbjct: 808 DPRLRDYQVVWKKGNRKLEETSVDDKYTFLKNNTLKVTDVQLNDSTEYSCEVITKVDNVI 867

Query: 392 AQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           AQ ++TV    + PS  TL    +     +SW+P
Sbjct: 868 AQGSITVVAKPDPPSGLTLSNA-EGVSVTLSWSP 900



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 158/671 (23%), Positives = 259/671 (38%), Gaps = 122/671 (18%)

Query: 74   INPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV--- 130
            I  S+R++ G  GK      +E   +  Y C            +  +S+   P  +V   
Sbjct: 441  ITRSERVTIGLDGKLYFANLMESDKKKDYICHAQYREARTILPATAVSLSVKPSNSVAHG 500

Query: 131  -EPEF--------INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP---NPRRKVG 178
             +PEF        I+A +  +VT EC   GLP P++ W      ++       N  R + 
Sbjct: 501  GKPEFFHHRNHSQISALKGNSVTLECLPKGLPTPKVEWKKKDGVLADTTGQVINFDRWLH 560

Query: 179  PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVL 238
             + IT++     D G Y C A+N+ G + +   V V A AP   + P++     G+TV L
Sbjct: 561  FDSITLD-----DDGEYECKASNAHGSITRSFTVTVEA-APYWVKEPQNLMYTPGETVRL 614

Query: 239  TCRVFGAPKPEVNWIHNQKELTG----GRYTILETGDLKITDVAFADSGEYTCFARNKLG 294
             C+  G P+P + W  N + LT      R T+   G L + DV   D+  Y C A+N   
Sbjct: 615  DCQADGVPRPSITWRINGQLLTEVDEEPRRTVT-GGTLIMKDVNIGDTAVYQCEAKN--- 670

Query: 295  TAQGSGSLTVKEHTHITDQPED--------YEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
               G GS+ +  + ++ + P          Y V  G+     C +   P  +  + W R 
Sbjct: 671  ---GHGSILLNTYLYVVELPPQILSPDGFIYNVTKGRDVALHCESFGSPRPR--VTWDRE 725

Query: 347  ------SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
                  S+P+ +   PR     + +L ++  S  DSG+Y C  Q     I   A L V  
Sbjct: 726  DTGALLSDPLLY---PRISILTNGTLKLSDVSHNDSGEYICSVQNT--NISITAKLDVFR 780

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P E  +    ++V+  + A +  +  +   L    R Y+V  W  K G   + E  V+  
Sbjct: 781  PSEILTGPQAVRVVQGESAFLDCDVDTDPRL----RDYQV-VW--KKGNRKLEETSVD-- 831

Query: 461  ESTTTEVDKFVPASKNFARV----LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLG 516
                   DK+     N  +V    L  +  Y+    E+I+ V      G++  +      
Sbjct: 832  -------DKYTFLKNNTLKVTDVQLNDSTEYS---CEVITKVDNVIAQGSITVV------ 875

Query: 517  SSAFYLKWVKPEQPNGVLM----GYKIKYQSVKG-TKVGPLLERLPYISDPTTTS----- 566
                     KP+ P+G+ +    G  +      G +   P+ E +    +   T      
Sbjct: 876  --------AKPDPPSGLTLSNAEGVSVTLSWSPGLSHNSPITEFIIQAREEYHTEERKWT 927

Query: 567  ----AKLAG--------LEPSTKYRIHLAGYTKAGDGAESKYLFY------VPFKNPDNV 608
                 K+ G        L P + YR  +    + G    S    +       P  NP  V
Sbjct: 928  WEELKKVPGDFNHVELTLHPFSTYRFRVIAINEVGRSRHSNPSDHHSTPPAAPSINPTGV 987

Query: 609  EGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEA-WNQDDVLDWRQSELVLAN 667
                + P  L+I+W  + +  HN   F+Y + WR  +     WN   V   R    ++ N
Sbjct: 988  RSNSAEPGTLIITWDEIDKRFHNGQDFQYEVLWREADGSNVNWNSGRV---RSPPFIVNN 1044

Query: 668  QPTFQPYEIKV 678
              T+ P+EIKV
Sbjct: 1045 TGTYTPFEIKV 1055



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 96/222 (43%), Gaps = 13/222 (5%)

Query: 463  TTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYL 522
            T+ EV      S+    V AFN     P S    F TPEGVPG   SLE       +  L
Sbjct: 1164 TSAEVTGLRLFSEYELMVTAFNSKGESPQSPPHRFHTPEGVPGPPASLEFESPTEKSLIL 1223

Query: 523  KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
             W  P + NGVL GY ++YQ    +K  P+   +  ++DP      L  L+P++ Y   +
Sbjct: 1224 SWSPPAETNGVLQGYIVQYQQEVESKNSPV--EILNVNDPKVKHITLDNLDPNSHYVFKV 1281

Query: 583  AGYTKAGDG--AESKYLFYVPFKNPDNVE-GRGSTPNNLVISWTAMPEIEHNAPHFKYRI 639
               TK G G     +    +  + P N+    G+T  NL  SW      E N  H  + I
Sbjct: 1282 IARTKTGQGPPITRRGATLLDGEPPKNITVTSGNTSVNL--SWVPG---ERNRNH-GFHI 1335

Query: 640  FWRRHNTGEAWNQDDVLDWRQSELVLAN-QPTFQPYEIKVVQ 680
             + + + G  W + + ++  Q    L   QP  Q Y +KVV 
Sbjct: 1336 QYLKKSGGGGWEKSEQVNTTQGFYTLTGLQPGAQ-YHLKVVH 1376



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 81/356 (22%), Positives = 138/356 (38%), Gaps = 39/356 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
           L C   G P P   W KDG         S    G +  +  +E    G Y C  SN +G 
Sbjct: 329 LACEATGNPTPTFRWLKDGELFGSETEGSGTLRGDNSSLDMLE----GEYRCYASNSLGT 384

Query: 113 AKSYSIDLSVLAAPYFTVEPEFINAAE-EETVTFECK-ASGLPEPEIHWVHNGKPISQAP 170
           A + ++ ++V   P    +       +  +++   C      P P IHW++    +    
Sbjct: 385 AMTQAVKVNVEPQPVLMKQQVMREQGDVGQSMVLSCNPPESSPPPSIHWMNMN--LMHIT 442

Query: 171 PNPRRKVGPN-RITIENLRKSD-TGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP--- 225
            + R  +G + ++   NL +SD   +Y C+A       Y++    + A A  ++  P   
Sbjct: 443 RSERVTIGLDGKLYFANLMESDKKKDYICHAQ------YREARTILPATAVSLSVKPSNS 496

Query: 226 -----KDEY----------TVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETG 270
                K E+           + G +V L C   G P P+V W      L      ++   
Sbjct: 497 VAHGGKPEFFHHRNHSQISALKGNSVTLECLPKGLPTPKVEWKKKDGVLADTTGQVINFD 556

Query: 271 D-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
             L    +   D GEY C A N  G+   S ++TV+   +   +P++     G++    C
Sbjct: 557 RWLHFDSITLDDDGEYECKASNAHGSITRSFTVTVEAAPYWVKEPQNLMYTPGETVRLDC 616

Query: 330 NAVSDPSLKLSIVW-LRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
            A   P  + SI W + G    + + EPR   +   +L +   +  D+  Y C A+
Sbjct: 617 QADGVP--RPSITWRINGQLLTEVDEEPRRTVTGG-TLIMKDVNIGDTAVYQCEAK 669



 Score = 42.4 bits (98), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 124/303 (40%), Gaps = 39/303 (12%)

Query: 122 VLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
           V   P  T  P+       E     C+A+G P P   W+ +G+             G N 
Sbjct: 306 VFQPPVLTEMPKSHTVFSLEDFNLACEATGNPTPTFRWLKDGELFGSETEGSGTLRGDNS 365

Query: 182 ITIENLRKSDTGNYGCNATNSLG-YVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC 240
            +++ L     G Y C A+NSLG  + + V VNV      + +    E    G+++VL+C
Sbjct: 366 -SLDMLE----GEYRCYASNSLGTAMTQAVKVNVEPQPVLMKQQVMREQGDVGQSMVLSC 420

Query: 241 R-VFGAPKPEVNWIH-NQKELTGG-RYTILETGDLKITDVAFAD-SGEYTCFARNKLGTA 296
                +P P ++W++ N   +T   R TI   G L   ++  +D   +Y C A+ +    
Sbjct: 421 NPPESSPPPSIHWMNMNLMHITRSERVTIGLDGKLYFANLMESDKKKDYICHAQYREART 480

Query: 297 ---QGSGSLTVKEHTHITD--QPEDY------EVEA--GQSATFRCNAVSDPSLKL---- 339
                + SL+VK    +    +PE +      ++ A  G S T  C     P+ K+    
Sbjct: 481 ILPATAVSLSVKPSNSVAHGGKPEFFHHRNHSQISALKGNSVTLECLPKGLPTPKVEWKK 540

Query: 340 --SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
              ++     + I+F+   R++  +  +L        D G+Y C+A      I    T+T
Sbjct: 541 KDGVLADTTGQVINFD---RWLHFDSITLD-------DDGEYECKASNAHGSITRSFTVT 590

Query: 398 VQV 400
           V+ 
Sbjct: 591 VEA 593


>gi|197215678|gb|ACH53067.1| L1 cell adhesion molecule isoform 2 precursor (predicted) [Otolemur
           garnettii]
          Length = 1226

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 140/470 (29%), Positives = 214/470 (45%), Gaps = 17/470 (3%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L + +V   D G Y 
Sbjct: 222 VALQGEPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLNVGEEDDGEYR 280

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 281 CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 339

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ + P + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 340 IPVEELPKDQKYQIQRGALILSNVQPSDTMVTQCEARNRHGVLLANAYIYVVQLPAKILT 399

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
                Y  V+G T  L C+ FGAP P V W+  +    L   R+     G L I D+   
Sbjct: 400 GDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLGEEGMTVLQDERFFPYANGTLGIRDLQAN 459

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T I   P     + G   TF C A  DPSL+ S
Sbjct: 460 DTGRYFCQAANDQNNVTIVANLQVKDATRIVQGPRSAIEKKGSRVTFTCQASFDPSLQPS 519

Query: 341 IVWLRGSEPIDFE---SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT-L 396
           I W RG      E   S+  F++  D  L +      D G Y+C A TELD +E++A  L
Sbjct: 520 ITW-RGDGGDLHELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCLASTELDMVESKAQLL 576

Query: 397 TVQVPLEAPS-NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIREL 455
            V  P   P    + + ++   +  +SW+P   +        Y ++   ++        L
Sbjct: 577 VVGSPGLVPQLKLSDLHLLKQSQVRLSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSL 634

Query: 456 IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVP 504
               G  T+  + K  P      RV A N    G PS    + VTPE  P
Sbjct: 635 GKVPGNQTSATL-KLSPYVHYTFRVTAINKYGPGEPSPASETVVTPEAAP 683



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 157/572 (27%), Positives = 240/572 (41%), Gaps = 67/572 (11%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--NLRKSDTGN 194
           A + E +  EC A G P P I W+    P+    P  R     +  T++  N+ + D G 
Sbjct: 223 ALQGEPLVLECIAEGFPTPTIKWLRPSGPM----PADRVTYQNHNKTLQLLNVGEEDDGE 278

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           Y C A NSLG      YV V A AP     P+      G+T  L C+V G P+PEV W  
Sbjct: 279 YRCLAENSLGSARHAYYVTVEA-APYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRI 337

Query: 255 NQ---KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE--HTH 309
           N    +EL   +   ++ G L +++V  +D+    C ARN+ G    +  + V +     
Sbjct: 338 NGIPVEELPKDQKYQIQRGALILSNVQPSDTMVTQCEARNRHGVLLANAYIYVVQLPAKI 397

Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
           +T   + Y    G +A   C A   P    S+ WL G E +    + RF    + +L + 
Sbjct: 398 LTGDNQTYMAVEGSTAYLLCKAFGAPVP--SVQWL-GEEGMTVLQDERFFPYANGTLGIR 454

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ----VIDAKKAVVSWNP 425
                D+G+Y C+A  +      Q  +T+   L+      ++Q     I+ K + V++  
Sbjct: 455 DLQANDTGRYFCQAAND------QNNVTIVANLQVKDATRIVQGPRSAIEKKGSRVTF-- 506

Query: 426 VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNG 485
               + +  F      + T +   G + EL     +    E  + V  S +++      G
Sbjct: 507 ----TCQASFDPSLQPSITWRGDGGDLHEL--GDSDKYFIEDGRLVIHSLDYSD----QG 556

Query: 486 AYNGPPSEIISFVTPE------GVPGTVQSLEAIPL---GSSAFYLKWVKPEQPNGVLMG 536
            Y+   S  +  V  +      G PG V  L+   L     S   L W   E  N  +  
Sbjct: 557 NYSCLASTELDMVESKAQLLVVGSPGLVPQLKLSDLHLLKQSQVRLSWSPAEDHNAPIEK 616

Query: 537 YKIKYQSVKGTKVGP----LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 592
           Y I+++     ++ P     L ++P       TSA L  L P   Y   +    K G G 
Sbjct: 617 YDIEFED---KEMAPEKWYSLGKVP----GNQTSATLK-LSPYVHYTFRVTAINKYGPGE 668

Query: 593 ESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
            S     V      P KNP +V+G G+  NN+VI+W  +  I+ NAP  +YR+ WR   T
Sbjct: 669 PSPASETVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRWIDWNAPQVQYRVQWRPQGT 728

Query: 647 GEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
              W +  V D     LV++N  TF PYEIKV
Sbjct: 729 RGIWQEQIVSD---PFLVVSNTSTFVPYEIKV 757



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 166/684 (24%), Positives = 257/684 (37%), Gaps = 70/684 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPIN--PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN-- 108
           L C   G P P+  W  +G+P+   P D+  Q   G +LI+ +V+ SD     CE  N  
Sbjct: 321 LDCQVQGRPQPEVTWRINGIPVEELPKDQKYQIQRG-ALILSNVQPSDTMVTQCEARNRH 379

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGKPIS 167
           GV  A +Y I +  L A   T + +   A E  T    CKA G P P + W+   G  + 
Sbjct: 380 GVLLANAY-IYVVQLPAKILTGDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLGEEGMTVL 438

Query: 168 QAPPNPRRKVGP---NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPEITE 223
           Q       +  P     + I +L+ +DTG Y C A N    V   +  N+ +  A  I +
Sbjct: 439 Q-----DERFFPYANGTLGIRDLQANDTGRYFCQAANDQNNV--TIVANLQVKDATRIVQ 491

Query: 224 APKDEYTVDGKTVVLTCRVFGAP--KPEVNWIHN---QKELTGGRYTILETGDLKITDVA 278
            P+      G  V  TC+    P  +P + W  +     EL       +E G L I  + 
Sbjct: 492 GPRSAIEKKGSRVTFTCQASFDPSLQPSITWRGDGGDLHELGDSDKYFIEDGRLVIHSLD 551

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
           ++D G Y+C A  +L   +    L V     +  Q +  ++   + +  R +        
Sbjct: 552 YSDQGNYSCLASTELDMVESKAQLLVVGSPGLVPQLKLSDLHLLKQSQVRLSWSPAEDHN 611

Query: 339 LSIVWLRGSEPIDFESEPRFVQSND-YSLTVTKSSELDSG-------QYTCRAQTELDFI 390
             I      E  D E E + +     YSL     ++  +         YT R      + 
Sbjct: 612 API------EKYDIEFEDKEMAPEKWYSLGKVPGNQTSATLKLSPYVHYTFRVTAINKYG 665

Query: 391 EAQ---ATLTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSPQSLRGHFRGYKV 440
             +   A+ TV  P  AP        +D K         V++W P+           Y+V
Sbjct: 666 PGEPSPASETVVTPEAAPEK----NPVDVKGEGNETNNMVITWKPLRWIDWNAPQVQYRV 721

Query: 441 QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 500
           Q W  +   G  +E IV+      +    FVP      +V A N    GP  ++    + 
Sbjct: 722 Q-WRPQGTRGIWQEQIVSDPFLVVSNTSTFVPYE---IKVQAVNSQGKGPEPQVTIGYSG 777

Query: 501 EGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVKGTKVGPLLER 555
           E  P     LE I  L SS   ++W  V   Q  G L GY + Y  +  +       + +
Sbjct: 778 EDYPQASPELEGIQILNSSTVLVRWWPVDLAQVKGHLRGYSVTYWWERSQRKHSKRHVHK 837

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF---KNPDNVEGRG 612
              I    TTS  L GL P + Y + +  +   G G   +  F  P     +P+ +    
Sbjct: 838 GHVIVPANTTSVILGGLRPYSSYHLEVKAFNGRGPGPALELTFSTPEGVPGHPEALHLEC 897

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
            +  +L++ W   P + HN     Y + +  H   E   +    D    EL   N     
Sbjct: 898 QSNTSLLLHW--QPPLSHNGVLTGYVLSY--HPLDEGGKEQLSFDLPDPELRTHNLTNLS 953

Query: 673 P---YEIKVVQTWTEKDGEGSIRE 693
           P   Y  ++  T  E  GE  +RE
Sbjct: 954 PYLRYRFQLQATTKEGPGEAIVRE 977



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 162/389 (41%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W+KDG+   P +     + Q  +  S  I   + 
Sbjct: 12  RRLVVFPTDDISLKCEASGKPEVQFRWTKDGIHFQPKEELGVTVQQLPHSGSFTITGNNS 71

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P  +   E E+V   C  
Sbjct: 72  NFAQRFQGIYRCFASNKLGTAMSHKIQLMAEGAPKWPKETVKP--VEVEEGESVILPCHP 129

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 130 PPSAEPLRIYWMNS--KILHIKQDERVTMGQNGNLYFANVITSDNHSDYICHAHFPGTRT 187

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 188 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGEPLVLECIAEGFPTPTIKWLR 247

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++ +V   D GEY C A N LG+A+ +  +TV+   +   +
Sbjct: 248 PSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHK 307

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++   + +  Q    +L ++    
Sbjct: 308 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELPKDQKYQIQRGALILSNVQP 365

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A+     + A A +  VQ+P
Sbjct: 366 SDTMVTQCEARNRHGVLLANAYIYVVQLP 394


>gi|395860583|ref|XP_003802590.1| PREDICTED: neural cell adhesion molecule L1 isoform 1 [Otolemur
           garnettii]
          Length = 1257

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 140/470 (29%), Positives = 214/470 (45%), Gaps = 17/470 (3%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L + +V   D G Y 
Sbjct: 253 VALQGEPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLNVGEEDDGEYR 311

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 312 CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 370

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ + P + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 371 IPVEELPKDQKYQIQRGALILSNVQPSDTMVTQCEARNRHGVLLANAYIYVVQLPAKILT 430

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
                Y  V+G T  L C+ FGAP P V W+  +    L   R+     G L I D+   
Sbjct: 431 GDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLGEEGMTVLQDERFFPYANGTLGIRDLQAN 490

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T I   P     + G   TF C A  DPSL+ S
Sbjct: 491 DTGRYFCQAANDQNNVTIVANLQVKDATRIVQGPRSAIEKKGSRVTFTCQASFDPSLQPS 550

Query: 341 IVWLRGSEPIDFE---SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT-L 396
           I W RG      E   S+  F++  D  L +      D G Y+C A TELD +E++A  L
Sbjct: 551 ITW-RGDGGDLHELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCLASTELDMVESKAQLL 607

Query: 397 TVQVPLEAPS-NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIREL 455
            V  P   P    + + ++   +  +SW+P    +       Y ++   ++        L
Sbjct: 608 VVGSPGLVPQLKLSDLHLLKQSQVRLSWSPAEDHN--APIEKYDIEFEDKEMAPEKWYSL 665

Query: 456 IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVP 504
               G  T+  + K  P      RV A N    G PS    + VTPE  P
Sbjct: 666 GKVPGNQTSATL-KLSPYVHYTFRVTAINKYGPGEPSPASETVVTPEAAP 714



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 157/572 (27%), Positives = 240/572 (41%), Gaps = 67/572 (11%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--NLRKSDTGN 194
           A + E +  EC A G P P I W+    P+    P  R     +  T++  N+ + D G 
Sbjct: 254 ALQGEPLVLECIAEGFPTPTIKWLRPSGPM----PADRVTYQNHNKTLQLLNVGEEDDGE 309

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           Y C A NSLG      YV V A AP     P+      G+T  L C+V G P+PEV W  
Sbjct: 310 YRCLAENSLGSARHAYYVTVEA-APYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRI 368

Query: 255 NQ---KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH-- 309
           N    +EL   +   ++ G L +++V  +D+    C ARN+ G    +  + V +     
Sbjct: 369 NGIPVEELPKDQKYQIQRGALILSNVQPSDTMVTQCEARNRHGVLLANAYIYVVQLPAKI 428

Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
           +T   + Y    G +A   C A   P    S+ WL G E +    + RF    + +L + 
Sbjct: 429 LTGDNQTYMAVEGSTAYLLCKAFGAPVP--SVQWL-GEEGMTVLQDERFFPYANGTLGIR 485

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ----VIDAKKAVVSWNP 425
                D+G+Y C+A  +      Q  +T+   L+      ++Q     I+ K + V++  
Sbjct: 486 DLQANDTGRYFCQAAND------QNNVTIVANLQVKDATRIVQGPRSAIEKKGSRVTF-- 537

Query: 426 VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNG 485
               + +  F      + T +   G + EL     +    E  + V  S +++      G
Sbjct: 538 ----TCQASFDPSLQPSITWRGDGGDLHEL--GDSDKYFIEDGRLVIHSLDYSD----QG 587

Query: 486 AYNGPPSEIISFVTPE------GVPGTVQSLEAIPL---GSSAFYLKWVKPEQPNGVLMG 536
            Y+   S  +  V  +      G PG V  L+   L     S   L W   E  N  +  
Sbjct: 588 NYSCLASTELDMVESKAQLLVVGSPGLVPQLKLSDLHLLKQSQVRLSWSPAEDHNAPIEK 647

Query: 537 YKIKYQSVKGTKVGP----LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 592
           Y I+++     ++ P     L ++P       TSA L  L P   Y   +    K G G 
Sbjct: 648 YDIEFED---KEMAPEKWYSLGKVP----GNQTSATLK-LSPYVHYTFRVTAINKYGPGE 699

Query: 593 ESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
            S     V      P KNP +V+G G+  NN+VI+W  +  I+ NAP  +YR+ WR   T
Sbjct: 700 PSPASETVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRWIDWNAPQVQYRVQWRPQGT 759

Query: 647 GEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
              W +  V D     LV++N  TF PYEIKV
Sbjct: 760 RGIWQEQIVSD---PFLVVSNTSTFVPYEIKV 788



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 166/684 (24%), Positives = 257/684 (37%), Gaps = 70/684 (10%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPIN--PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN-- 108
            L C   G P P+  W  +G+P+   P D+  Q   G +LI+ +V+ SD     CE  N  
Sbjct: 352  LDCQVQGRPQPEVTWRINGIPVEELPKDQKYQIQRG-ALILSNVQPSDTMVTQCEARNRH 410

Query: 109  GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGKPIS 167
            GV  A +Y I +  L A   T + +   A E  T    CKA G P P + W+   G  + 
Sbjct: 411  GVLLANAY-IYVVQLPAKILTGDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLGEEGMTVL 469

Query: 168  QAPPNPRRKVGP---NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPEITE 223
            Q       +  P     + I +L+ +DTG Y C A N    V   +  N+ +  A  I +
Sbjct: 470  Q-----DERFFPYANGTLGIRDLQANDTGRYFCQAANDQNNV--TIVANLQVKDATRIVQ 522

Query: 224  APKDEYTVDGKTVVLTCRVFGAP--KPEVNWIHN---QKELTGGRYTILETGDLKITDVA 278
             P+      G  V  TC+    P  +P + W  +     EL       +E G L I  + 
Sbjct: 523  GPRSAIEKKGSRVTFTCQASFDPSLQPSITWRGDGGDLHELGDSDKYFIEDGRLVIHSLD 582

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            ++D G Y+C A  +L   +    L V     +  Q +  ++   + +  R +        
Sbjct: 583  YSDQGNYSCLASTELDMVESKAQLLVVGSPGLVPQLKLSDLHLLKQSQVRLSWSPAEDHN 642

Query: 339  LSIVWLRGSEPIDFESEPRFVQSND-YSLTVTKSSELDSG-------QYTCRAQTELDFI 390
              I      E  D E E + +     YSL     ++  +         YT R      + 
Sbjct: 643  API------EKYDIEFEDKEMAPEKWYSLGKVPGNQTSATLKLSPYVHYTFRVTAINKYG 696

Query: 391  EAQ---ATLTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSPQSLRGHFRGYKV 440
              +   A+ TV  P  AP        +D K         V++W P+           Y+V
Sbjct: 697  PGEPSPASETVVTPEAAPEK----NPVDVKGEGNETNNMVITWKPLRWIDWNAPQVQYRV 752

Query: 441  QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 500
            Q W  +   G  +E IV+      +    FVP      +V A N    GP  ++    + 
Sbjct: 753  Q-WRPQGTRGIWQEQIVSDPFLVVSNTSTFVPYE---IKVQAVNSQGKGPEPQVTIGYSG 808

Query: 501  EGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVKGTKVGPLLER 555
            E  P     LE I  L SS   ++W  V   Q  G L GY + Y  +  +       + +
Sbjct: 809  EDYPQASPELEGIQILNSSTVLVRWWPVDLAQVKGHLRGYSVTYWWERSQRKHSKRHVHK 868

Query: 556  LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF---KNPDNVEGRG 612
               I    TTS  L GL P + Y + +  +   G G   +  F  P     +P+ +    
Sbjct: 869  GHVIVPANTTSVILGGLRPYSSYHLEVKAFNGRGPGPALELTFSTPEGVPGHPEALHLEC 928

Query: 613  STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
             +  +L++ W   P + HN     Y + +  H   E   +    D    EL   N     
Sbjct: 929  QSNTSLLLHW--QPPLSHNGVLTGYVLSY--HPLDEGGKEQLSFDLPDPELRTHNLTNLS 984

Query: 673  P---YEIKVVQTWTEKDGEGSIRE 693
            P   Y  ++  T  E  GE  +RE
Sbjct: 985  PYLRYRFQLQATTKEGPGEAIVRE 1008



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 162/389 (41%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W+KDG+   P +     + Q  +  S  I   + 
Sbjct: 43  RRLVVFPTDDISLKCEASGKPEVQFRWTKDGIHFQPKEELGVTVQQLPHSGSFTITGNNS 102

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P  +   E E+V   C  
Sbjct: 103 NFAQRFQGIYRCFASNKLGTAMSHKIQLMAEGAPKWPKETVKP--VEVEEGESVILPCHP 160

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 161 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVITSDNHSDYICHAHFPGTRT 218

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 219 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGEPLVLECIAEGFPTPTIKWLR 278

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++ +V   D GEY C A N LG+A+ +  +TV+   +   +
Sbjct: 279 PSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHK 338

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++   + +  Q    +L ++    
Sbjct: 339 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELPKDQKYQIQRGALILSNVQP 396

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A+     + A A +  VQ+P
Sbjct: 397 SDTMVTQCEARNRHGVLLANAYIYVVQLP 425


>gi|47215393|emb|CAG01090.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1958

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 156/519 (30%), Positives = 230/519 (44%), Gaps = 32/519 (6%)

Query: 151 GLPEPEIHWVHNGKPISQAP-PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           G P+P+I W  +  PIS    P  R  VG   + I  L   DTG + C A N  G +  +
Sbjct: 52  GTPQPDIVWYKDAAPISPVKIPRYRVLVG-GSLQINGLLPDDTGMFQCFARNLAGEIQTN 110

Query: 210 VYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RY 264
            Y+ V + AP IT  P D   +DG +V+L C   GAP+P + W   ++ L  G     R+
Sbjct: 111 TYLAVTSIAPNITAGPADSAVIDGTSVILHCETSGAPRPAITWQKGERVLASGSVQLPRF 170

Query: 265 TILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
           T+LE+G L I+    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  
Sbjct: 171 TLLESGSLLISPSHLSDAGTYTCMASNSRGIDEASADLLVWARTRITKPPQDQSVIKGTK 230

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           A   C    DPS+ +  VW +    ID  + PR     D +L ++++   D G YTCR  
Sbjct: 231 AVMACGVAHDPSVTVRHVWEKSGTAIDVNASPRLRLDPDGTLHISQTWSGDIGTYTCRVT 290

Query: 385 TELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV-VSWNPVSPQSLRGH--FRGYKVQ 441
           +        A L V+    AP N   +     K+A+ ++W     Q+  G+     Y ++
Sbjct: 291 SVGGNDSRSAHLRVRQLPHAPENPVALLSTTEKRAINLTWA----QAFDGNSPLIRYILE 346

Query: 442 TWTEKDGEGSIRELIVN-KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVT 499
             +E +   ++  L+ N + EST   V   +PA     R+ A N    G  S E      
Sbjct: 347 V-SENNAPWTV--LLANIEPESTGVTVGGLIPARSYQFRLCAVNDVGRGQFSKETDRLTL 403

Query: 500 PEGVPGT-VQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERL 556
           PE  P    Q++ A    + +  ++W  P +   NG L GY I+Y  + G    P+  ++
Sbjct: 404 PEEPPSAPPQTVIASGRTNQSIMIQWQPPPESHQNGPLQGYIIRY-CLSGL---PVDCQM 459

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGR 611
             I++P   S  L  L   T Y I +A Y  AG G  S       L  VP   P NV   
Sbjct: 460 KNITNPDQNSLLLEDLIIWTNYEIEVAAYNGAGRGTYSHKVTEWTLQGVPTVPPGNVHAE 519

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIF-WRRHNTGEA 649
                 + ++W+A      N  +  Y++  W    T EA
Sbjct: 520 AVNSTTVRLTWSAPSPQFINGINQGYKLLAWEPGRTNEA 558



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 148/630 (23%), Positives = 237/630 (37%), Gaps = 60/630 (9%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY--GKSLIIKHVEFSDQGSYTCEVSNGV 110
           L C   GTP P  +W KD  PI+P  +I +     G SL I  +   D G + C   N  
Sbjct: 48  LLC--PGTPQPDIVWYKDAAPISPV-KIPRYRVLVGGSLQINGLLPDDTGMFQCFARNLA 104

Query: 111 GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPIS--- 167
           GE ++ +       AP  T  P      +  +V   C+ SG P P I W    + ++   
Sbjct: 105 GEIQTNTYLAVTSIAPNITAGPADSAVIDGTSVILHCETSGAPRPAITWQKGERVLASGS 164

Query: 168 -QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
            Q P     + G   I+  +L  SD G Y C A+NS G       + V A    IT+ P+
Sbjct: 165 VQLPRFTLLESGSLLISPSHL--SDAGTYTCMASNSRGIDEASADLLVWART-RITKPPQ 221

Query: 227 DEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-----TGGRYTILETGDLKITDVAFAD 281
           D+  + G   V+ C V   P   V  +  +           R  +   G L I+     D
Sbjct: 222 DQSVIKGTKAVMACGVAHDPSVTVRHVWEKSGTAIDVNASPRLRLDPDGTLHISQTWSGD 281

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------EDYEVEAGQSATFRCNAVSD 334
            G YTC   +  G    S  L V++  H  + P       E   +    +  F  N+   
Sbjct: 282 IGTYTCRVTSVGGNDSRSAHLRVRQLPHAPENPVALLSTTEKRAINLTWAQAFDGNS--- 338

Query: 335 PSLKLSIVWLRGSEP-----IDFESEPR------FVQSNDYSLTVTKSSELDSGQYTCRA 383
           P ++  +     + P      + E E         + +  Y   +   +++  GQ++ + 
Sbjct: 339 PLIRYILEVSENNAPWTVLLANIEPESTGVTVGGLIPARSYQFRLCAVNDVGRGQFS-KE 397

Query: 384 QTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW 443
              L   E         P  AP    +      +  ++ W P       G  +GY ++  
Sbjct: 398 TDRLTLPEE--------PPSAPPQTVIASGRTNQSIMIQWQPPPESHQNGPLQGYIIRYC 449

Query: 444 TEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGV 503
                     + I N  +++    D  +  +     V A+NGA  G  S  ++  T +GV
Sbjct: 450 LSGLPVDCQMKNITNPDQNSLLLEDLIIWTNYEI-EVAAYNGAGRGTYSHKVTEWTLQGV 508

Query: 504 PGTVQ--SLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
           P TV   ++ A  + S+   L W  P     NG+  GYK+       T    ++   P  
Sbjct: 509 P-TVPPGNVHAEAVNSTTVRLTWSAPSPQFINGINQGYKLLAWEPGRTNEASMVTVRPNF 567

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPN--- 616
            D +     ++GL+  T+Y   +  +T  GDG  S  L +   ++     G  S  +   
Sbjct: 568 QD-SIHVGHISGLKKFTEYYTSVLCFTTPGDGPRSPPLRFRTHEDTPGAVGHLSFTDILD 626

Query: 617 -NLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
            +L +SW   P+ E N     YRI W   N
Sbjct: 627 TSLKVSWKE-PQ-EKNGLLTGYRISWEEFN 654



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 141/583 (24%), Positives = 228/583 (39%), Gaps = 60/583 (10%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEV 106
           V L C   G P P   W K G  +  S  +    +      SL+I     SD G+YTC  
Sbjct: 137 VILHCETSGAPRPAITWQK-GERVLASGSVQLPRFTLLESGSLLISPSHLSDAGTYTCMA 195

Query: 107 SN--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--WVHN 162
           SN  G+ EA   S DL V A    T  P+  +  +       C  +  P   +   W  +
Sbjct: 196 SNSRGIDEA---SADLLVWARTRITKPPQDQSVIKGTKAVMACGVAHDPSVTVRHVWEKS 252

Query: 163 GKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAP 219
           G  I     +PR ++ P+  + I      D G Y C  T+  G   +  ++ V  L HAP
Sbjct: 253 GTAI-DVNASPRLRLDPDGTLHISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQLPHAP 311

Query: 220 EITEAPKDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTIL------ETGDL 272
           E   A     T + + + LT  + F    P + +I    E     +T+L      E+  +
Sbjct: 312 ENPVALLS--TTEKRAINLTWAQAFDGNSPLIRYILEVSE-NNAPWTVLLANIEPESTGV 368

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS--ATFRCN 330
            +  +  A S ++   A N +G  Q S     KE   +T  PE+      Q+  A+ R N
Sbjct: 369 TVGGLIPARSYQFRLCAVNDVGRGQFS-----KETDRLT-LPEEPPSAPPQTVIASGRTN 422

Query: 331 AV-------------SDPSLKLSIVWLRGSEPIDFE----SEPRFVQSNDYSLTVTKSSE 373
                          + P     I +     P+D +    + P         L +  + E
Sbjct: 423 QSIMIQWQPPPESHQNGPLQGYIIRYCLSGLPVDCQMKNITNPDQNSLLLEDLIIWTNYE 482

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRG 433
           ++   Y    +        + TL   VP   P N    + +++    ++W+  SPQ + G
Sbjct: 483 IEVAAYNGAGRGTYSHKVTEWTLQ-GVPTVPPGNVH-AEAVNSTTVRLTWSAPSPQFING 540

Query: 434 HFRGYKVQTWTE-KDGEGSIRELIVNKGESTTT-EVDKFVPASKNFARVLAFNGAYNGPP 491
             +GYK+  W   +  E S+  +  N  +S     +      ++ +  VL F    +GP 
Sbjct: 541 INQGYKLLAWEPGRTNEASMVTVRPNFQDSIHVGHISGLKKFTEYYTSVLCFTTPGDGPR 600

Query: 492 SEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP 551
           S  + F T E  PG V  L    +  ++  + W +P++ NG+L GY+I ++    T    
Sbjct: 601 SPPLRFRTHEDTPGAVGHLSFTDILDTSLKVSWKEPQEKNGLLTGYRISWEEFNRTNT-- 658

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
              R+ +    +T   K+ GL   T Y I +A  T  G G  S
Sbjct: 659 ---RVTHYLPNSTQEYKVTGLTALTTYTIQVAAMTSKGQGQLS 698



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 10/182 (5%)

Query: 418  KAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
            + V  W P+      G+    GY+VQ W      G +  +I+++ E   T ++     ++
Sbjct: 836  QPVARWVPLPEWEYNGNPDLVGYRVQYWKAGSKGGVLSHVIMDRLEREFT-IEDLEEWTE 894

Query: 476  NFARVLAFNGAYNGPPSEIISFVTPEGVPGT-VQSLEAIPLGSSAFYLKW--VKPEQPNG 532
               RV A NG  +GP S+ +   T E VP +   ++ A    SS+  ++W  V     NG
Sbjct: 895  YEVRVQAINGIGSGPWSQPVHGRTRESVPSSGPANVSAFATTSSSILVRWGEVPHADRNG 954

Query: 533  VLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 592
            +++GYK+ Y+  K +   P       +   T+ S +L GL     Y I +  +T+ GDG 
Sbjct: 955  LILGYKVVYKE-KDSDTAPSSWS---VEGNTSHSVQLTGLGKYVLYEIQVLAFTRIGDGR 1010

Query: 593  ES 594
             S
Sbjct: 1011 SS 1012



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 6/149 (4%)

Query: 396  LTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW--TEKDGEGSIR 453
            L V VP   P N  ++Q   A +  V+W+P    +  G  +GYKV  W    ++    +R
Sbjct: 1397 LPVLVPTSPPLNV-MVQSSTATQLDVTWDPPPLDAQNGDIQGYKVYFWEYQLRNETERLR 1455

Query: 454  ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAI 513
             L + +      ++      +     V AFN A +GP S      T +  P     +   
Sbjct: 1456 TLFLPE---LGVKLKNLTGYTTYMISVAAFNAAGDGPRSLPTRGRTQQAAPSAPSFIHFS 1512

Query: 514  PLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
             L +++  + W +P+Q NG++ GY++ Y+
Sbjct: 1513 ELTTTSVNVSWGEPKQANGIIEGYRLVYE 1541



 Score = 44.7 bits (104), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N +      +   +V W  V      G   GYKV  + EKD + +     V  
Sbjct: 922  VPSSGPANVSAFATT-SSSILVRWGEVPHADRNGLILGYKV-VYKEKDSDTAPSSWSVEG 979

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-IISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G  S   I   T + VPG    +    + ++
Sbjct: 980  NTSHSVQLTGLGKYVLYEIQVLAFTRIGDGRSSSPSILERTLDDVPGPPVGILFPEVRTT 1039

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P QPNG+++ Y+I Y+          ++ L     P+       GL+    Y
Sbjct: 1040 SVRLIWQPPAQPNGIILAYQITYRRNSSNINAATVDVL----SPSARQYTATGLKAELVY 1095

Query: 579  RIHLAGYTKAGDGAESKYL 597
               L   T+ G G  ++ L
Sbjct: 1096 VFRLTAQTRKGWGEAAEAL 1114



 Score = 39.7 bits (91), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 68/165 (41%), Gaps = 9/165 (5%)

Query: 531  NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGD 590
            N  L+GY+++Y    G+K G L      I D       +  LE  T+Y + +      G 
Sbjct: 852  NPDLVGYRVQYWKA-GSKGGVLSH---VIMDRLEREFTIEDLEEWTEYEVRVQAINGIGS 907

Query: 591  GAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
            G  S+ +       VP   P NV    +T +++++ W  +P  + N     Y++ ++  +
Sbjct: 908  GPWSQPVHGRTRESVPSSGPANVSAFATTSSSILVRWGEVPHADRNGLILGYKVVYKEKD 967

Query: 646  TGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGS 690
            +  A +   V       + L     +  YEI+V+      DG  S
Sbjct: 968  SDTAPSSWSVEGNTSHSVQLTGLGKYVLYEIQVLAFTRIGDGRSS 1012


>gi|395860587|ref|XP_003802592.1| PREDICTED: neural cell adhesion molecule L1 isoform 3 [Otolemur
           garnettii]
          Length = 1248

 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 140/470 (29%), Positives = 214/470 (45%), Gaps = 17/470 (3%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L + +V   D G Y 
Sbjct: 248 VALQGEPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLNVGEEDDGEYR 306

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 307 CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 365

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ + P + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 366 IPVEELPKDQKYQIQRGALILSNVQPSDTMVTQCEARNRHGVLLANAYIYVVQLPAKILT 425

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
                Y  V+G T  L C+ FGAP P V W+  +    L   R+     G L I D+   
Sbjct: 426 GDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLGEEGMTVLQDERFFPYANGTLGIRDLQAN 485

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T I   P     + G   TF C A  DPSL+ S
Sbjct: 486 DTGRYFCQAANDQNNVTIVANLQVKDATRIVQGPRSAIEKKGSRVTFTCQASFDPSLQPS 545

Query: 341 IVWLRGSEPIDFE---SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA-TL 396
           I W RG      E   S+  F++  D  L +      D G Y+C A TELD +E++A  L
Sbjct: 546 ITW-RGDGGDLHELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCLASTELDMVESKAQLL 602

Query: 397 TVQVPLEAPS-NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIREL 455
            V  P   P    + + ++   +  +SW+P   +        Y ++   ++        L
Sbjct: 603 VVGSPGLVPQLKLSDLHLLKQSQVRLSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSL 660

Query: 456 IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVP 504
               G  T+  + K  P      RV A N    G PS    + VTPE  P
Sbjct: 661 GKVPGNQTSATL-KLSPYVHYTFRVTAINKYGPGEPSPASETVVTPEAAP 709



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 157/572 (27%), Positives = 240/572 (41%), Gaps = 67/572 (11%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--NLRKSDTGN 194
           A + E +  EC A G P P I W+    P+    P  R     +  T++  N+ + D G 
Sbjct: 249 ALQGEPLVLECIAEGFPTPTIKWLRPSGPM----PADRVTYQNHNKTLQLLNVGEEDDGE 304

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           Y C A NSLG      YV V A AP     P+      G+T  L C+V G P+PEV W  
Sbjct: 305 YRCLAENSLGSARHAYYVTVEA-APYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRI 363

Query: 255 NQ---KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH-- 309
           N    +EL   +   ++ G L +++V  +D+    C ARN+ G    +  + V +     
Sbjct: 364 NGIPVEELPKDQKYQIQRGALILSNVQPSDTMVTQCEARNRHGVLLANAYIYVVQLPAKI 423

Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
           +T   + Y    G +A   C A   P    S+ WL G E +    + RF    + +L + 
Sbjct: 424 LTGDNQTYMAVEGSTAYLLCKAFGAPVP--SVQWL-GEEGMTVLQDERFFPYANGTLGIR 480

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ----VIDAKKAVVSWNP 425
                D+G+Y C+A  +      Q  +T+   L+      ++Q     I+ K + V++  
Sbjct: 481 DLQANDTGRYFCQAAND------QNNVTIVANLQVKDATRIVQGPRSAIEKKGSRVTF-- 532

Query: 426 VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNG 485
               + +  F      + T +   G + EL     +    E  + V  S +++      G
Sbjct: 533 ----TCQASFDPSLQPSITWRGDGGDLHEL--GDSDKYFIEDGRLVIHSLDYSD----QG 582

Query: 486 AYNGPPSEIISFVTPE------GVPGTVQSLEAIPL---GSSAFYLKWVKPEQPNGVLMG 536
            Y+   S  +  V  +      G PG V  L+   L     S   L W   E  N  +  
Sbjct: 583 NYSCLASTELDMVESKAQLLVVGSPGLVPQLKLSDLHLLKQSQVRLSWSPAEDHNAPIEK 642

Query: 537 YKIKYQSVKGTKVGP----LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 592
           Y I+++     ++ P     L ++P       TSA L  L P   Y   +    K G G 
Sbjct: 643 YDIEFED---KEMAPEKWYSLGKVP----GNQTSATLK-LSPYVHYTFRVTAINKYGPGE 694

Query: 593 ESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
            S     V      P KNP +V+G G+  NN+VI+W  +  I+ NAP  +YR+ WR   T
Sbjct: 695 PSPASETVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRWIDWNAPQVQYRVQWRPQGT 754

Query: 647 GEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
              W +  V D     LV++N  TF PYEIKV
Sbjct: 755 RGIWQEQIVSD---PFLVVSNTSTFVPYEIKV 783



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 166/684 (24%), Positives = 257/684 (37%), Gaps = 70/684 (10%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPIN--PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN-- 108
            L C   G P P+  W  +G+P+   P D+  Q   G +LI+ +V+ SD     CE  N  
Sbjct: 347  LDCQVQGRPQPEVTWRINGIPVEELPKDQKYQIQRG-ALILSNVQPSDTMVTQCEARNRH 405

Query: 109  GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGKPIS 167
            GV  A +Y I +  L A   T + +   A E  T    CKA G P P + W+   G  + 
Sbjct: 406  GVLLANAY-IYVVQLPAKILTGDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLGEEGMTVL 464

Query: 168  QAPPNPRRKVGP---NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPEITE 223
            Q       +  P     + I +L+ +DTG Y C A N    V   +  N+ +  A  I +
Sbjct: 465  Q-----DERFFPYANGTLGIRDLQANDTGRYFCQAANDQNNV--TIVANLQVKDATRIVQ 517

Query: 224  APKDEYTVDGKTVVLTCRVFGAP--KPEVNWIHN---QKELTGGRYTILETGDLKITDVA 278
             P+      G  V  TC+    P  +P + W  +     EL       +E G L I  + 
Sbjct: 518  GPRSAIEKKGSRVTFTCQASFDPSLQPSITWRGDGGDLHELGDSDKYFIEDGRLVIHSLD 577

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            ++D G Y+C A  +L   +    L V     +  Q +  ++   + +  R +        
Sbjct: 578  YSDQGNYSCLASTELDMVESKAQLLVVGSPGLVPQLKLSDLHLLKQSQVRLSWSPAEDHN 637

Query: 339  LSIVWLRGSEPIDFESEPRFVQSND-YSLTVTKSSELDSG-------QYTCRAQTELDFI 390
              I      E  D E E + +     YSL     ++  +         YT R      + 
Sbjct: 638  API------EKYDIEFEDKEMAPEKWYSLGKVPGNQTSATLKLSPYVHYTFRVTAINKYG 691

Query: 391  EAQ---ATLTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSPQSLRGHFRGYKV 440
              +   A+ TV  P  AP        +D K         V++W P+           Y+V
Sbjct: 692  PGEPSPASETVVTPEAAPEK----NPVDVKGEGNETNNMVITWKPLRWIDWNAPQVQYRV 747

Query: 441  QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 500
            Q W  +   G  +E IV+      +    FVP      +V A N    GP  ++    + 
Sbjct: 748  Q-WRPQGTRGIWQEQIVSDPFLVVSNTSTFVPYE---IKVQAVNSQGKGPEPQVTIGYSG 803

Query: 501  EGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVKGTKVGPLLER 555
            E  P     LE I  L SS   ++W  V   Q  G L GY + Y  +  +       + +
Sbjct: 804  EDYPQASPELEGIQILNSSTVLVRWWPVDLAQVKGHLRGYSVTYWWERSQRKHSKRHVHK 863

Query: 556  LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF---KNPDNVEGRG 612
               I    TTS  L GL P + Y + +  +   G G   +  F  P     +P+ +    
Sbjct: 864  GHVIVPANTTSVILGGLRPYSSYHLEVKAFNGRGPGPALELTFSTPEGVPGHPEALHLEC 923

Query: 613  STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
             +  +L++ W   P + HN     Y + +  H   E   +    D    EL   N     
Sbjct: 924  QSNTSLLLHW--QPPLSHNGVLTGYVLSY--HPLDEGGKEQLSFDLPDPELRTHNLTNLS 979

Query: 673  P---YEIKVVQTWTEKDGEGSIRE 693
            P   Y  ++  T  E  GE  +RE
Sbjct: 980  PYLRYRFQLQATTKEGPGEAIVRE 1003



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 162/389 (41%), Gaps = 34/389 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W+KDG+   P +     + Q  +  S  I   + 
Sbjct: 38  RRLVVFPTDDISLKCEASGKPEVQFRWTKDGIHFQPKEELGVTVQQLPHSGSFTITGNNS 97

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG Y C  SN +G A S+ I L    AP +   TV+P  +   E E+V   C  
Sbjct: 98  NFAQRFQGIYRCFASNKLGTAMSHKIQLMAEGAPKWPKETVKP--VEVEEGESVILPCHP 155

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 156 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVITSDNHSDYICHAHFPGTRT 213

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 214 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGEPLVLECIAEGFPTPTIKWLR 273

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++ +V   D GEY C A N LG+A+ +  +TV+   +   +
Sbjct: 274 PSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHK 333

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++   + +  Q    +L ++    
Sbjct: 334 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELPKDQKYQIQRGALILSNVQP 391

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            D+    C A+     + A A +  VQ+P
Sbjct: 392 SDTMVTQCEARNRHGVLLANAYIYVVQLP 420


>gi|344276490|ref|XP_003410041.1| PREDICTED: contactin-3 [Loxodonta africana]
          Length = 1042

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 173/631 (27%), Positives = 275/631 (43%), Gaps = 50/631 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P   S +I    +   L I + +  D GSY 
Sbjct: 252 AAKGSTVKLECFALGNPVPQINWRRSDGLPF--SSKIKLRKFNGILEIPNFQQEDSGSYE 309

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    + I  A E+ + +EC+ASG P+P   W+ NG
Sbjct: 310 CIAENSRGKNVARG-RLTYYAKPHWVQTIKDIEIAVEDNLYWECRASGKPKPSYRWLKNG 368

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + +       R ++    +TI NL  +D+G + C A N  G VY    + V+A AP+ + 
Sbjct: 369 EALVL---EERIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSR 425

Query: 224 APKDEYTV--DGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
            P  +      G  V+L C+   +P     W    + +    R + L+   LKIT+V  A
Sbjct: 426 NPMKKLVQVQAGSLVILECKPRASPSAFSFWKKGDRIVQKSERISFLKDSGLKITNVTKA 485

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L + 
Sbjct: 486 DVGSYTCIAENQFGKANGTTRLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDIM 545

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ E    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 546 FTWYFNGALTDFKKEGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDRVSSAADL 605

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
            V+     P+N  ++++ D   A +SW       +PV   S++       G++  T    
Sbjct: 606 IVRGSPGPPANVKVVEITDT-TAQLSWKEGTDNHSPVISYSVQARTPFSVGWQTVT---- 660

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 661 ----TVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 714

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S  +   GS S   + W  V  E  NG   GY + ++    T     ++ +    D 
Sbjct: 715 VPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPYGVTN---WIQTVVTSPDT 771

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES--KYLFYV---PFKNPDNVEGRGSTPNN 617
           +    +   + P ++Y + +  Y   G+G  S    +F+    P   P  V     + + 
Sbjct: 772 SRYVFRNESIVPFSRYEVKVGVYNNKGEGPFSPVTAVFFCRDEPAVAPSQVSADSLSSSE 831

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FWRRHNTG 647
           + +SW A+P    N     Y + FW  +N+G
Sbjct: 832 IEVSWNAIPWKLSNGHLLGYEVRFW--NNSG 860



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 162/618 (26%), Positives = 244/618 (39%), Gaps = 48/618 (7%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V  A+       ++           P   V+ PE + AA
Sbjct: 194 LYIAKVEPSDVGNYTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 253

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P S       RK     + I N ++ D+G+Y C
Sbjct: 254 KGSTVKLECFALGNPVPQINWRRSDGLPFSSKI--KLRKFN-GILEIPNFQQEDSGSYEC 310

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K+V    L +   P   +  KD        +   CR  G PKP   W+ N
Sbjct: 311 IAENSRG---KNVARGRLTYYAKPHWVQTIKDIEIAVEDNLYWECRASGKPKPSYRWLKN 367

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
            + L       +E G L I+++   DSG + C A NK G    S  L  V      +  P
Sbjct: 368 GEALVLEERIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSRNP 427

Query: 315 ED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
                +V+AG      C   + PS   S  W +G   +       F++  D  L +T  +
Sbjct: 428 MKKLVQVQAGSLVILECKPRASPS-AFSF-WKKGDRIVQKSERISFLK--DSGLKITNVT 483

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQ 429
           + D G YTC A+ +         L V  P     APSN   + V   +  ++        
Sbjct: 484 KADVGSYTCIAENQFGKANGTTRLVVTEPTRITLAPSN---MDVSVGESVILPCQVQHDP 540

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
            L   F  Y     T+   EGS  E +   G S+   + + +    +   V       + 
Sbjct: 541 LLDIMFTWYFNGALTDFKKEGSHFEKV--GGSSSGDLMIRNIQLKHSGKYVCMVQTGVDR 598

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
             S     V   G PG   +++ + +  +   L W +    +  ++ Y +  Q+     V
Sbjct: 599 VSSAADLIV--RGSPGPPANVKVVEITDTTAQLSWKEGTDNHSPVISYSV--QARTPFSV 654

Query: 550 G-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPF 602
           G   +  +P + D  T +A +  L P  +Y   +    K G G  S      +    VP 
Sbjct: 655 GWQTVTTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 714

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
             P  V G G + + LVI+W  +PE   N   F Y + +R +     W Q  V     S 
Sbjct: 715 VPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPYGVTN-WIQTVVTSPDTSR 773

Query: 663 LVLANQPT--FQPYEIKV 678
            V  N+    F  YE+KV
Sbjct: 774 YVFRNESIVPFSRYEVKV 791



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 169/730 (23%), Positives = 279/730 (38%), Gaps = 107/730 (14%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  +   +RI   N   +L I ++  +D G + C   N  G   
Sbjct: 352  CRASGKPKPSYRWLKNGEALVLEERIQIEN--GALTISNLNVTDSGMFQCIAENKHGLVY 409

Query: 115  SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
            S S +L V+A AP F+  P  + +       V  ECK    P     W    + + ++  
Sbjct: 410  S-SAELKVVASAPDFSRNPMKKLVQVQAGSLVILECKPRASPSAFSFWKKGDRIVQKSER 468

Query: 172  NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
                K    +IT  N+ K+D G+Y C A N  G       + V+     IT AP +    
Sbjct: 469  ISFLKDSGLKIT--NVTKADVGSYTCIAENQFGKANGTTRL-VVTEPTRITLAPSNMDVS 525

Query: 232  DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
             G++V+L C+V   P  ++   W  N             E  GG      +GDL I ++ 
Sbjct: 526  VGESVILPCQVQHDPLLDIMFTWYFNGALTDFKKEGSHFEKVGGS----SSGDLMIRNIQ 581

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
               SG+Y C  +  +     +  L V+                G  A  +   ++D + +
Sbjct: 582  LKHSGKYVCMVQTGVDRVSSAADLIVRG-------------SPGPPANVKVVEITDTTAQ 628

Query: 339  LSIVWLRGSEP----IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD-FIE-- 391
            LS  W  G++     I +  + R   S  +  TVT   E+  G+       EL+ ++E  
Sbjct: 629  LS--WKEGTDNHSPVISYSVQARTPFSVGWQ-TVTTVPEVIDGKTHTATVVELNPWVEYE 685

Query: 392  -----------------AQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
                             ++   T +   E P +          + V++W+PV  +   G 
Sbjct: 686  FRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGE 745

Query: 435  -------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
                   FR Y V  W +           V + ES        VP S+   +V  +N   
Sbjct: 746  GFGYVVAFRPYGVTNWIQTVVTSPDTSRYVFRNES-------IVPFSRYEVKVGVYNNKG 798

Query: 488  NGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSV 544
             GP S + +       P    S + A  L SS   + W  +  +  NG L+GY++++ + 
Sbjct: 799  EGPFSPVTAVFFCRDEPAVAPSQVSADSLSSSEIEVSWNAIPWKLSNGHLLGYEVRFWNN 858

Query: 545  KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
             G   G              TSA+L  L+ +  Y + +  Y  AG G  S  +       
Sbjct: 859  SG---GEEESSSKVKVSGNETSARLRDLKSNLAYYMAVRAYNSAGTGPFSATVNATTKKT 915

Query: 601  -PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR---RHNTGEAWNQDDVL 656
             P + P NV    +T N ++++W  +  +E+ +    Y++F+R   +HN      Q    
Sbjct: 916  PPSQPPGNVVWN-ATDNKVLLNWERVKAMENESEVTGYKVFYRTSSQHNV-----QVLST 969

Query: 657  DWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGS----IRELIVNKGESTTTEVDKFVPA 712
            +   +EL+L   P  + Y I+V  T    DG  S    I  +       +T+ +    P 
Sbjct: 970  NKTSAELLL---PIKEDYIIEVKATTDGGDGTSSEQIRIPGITNMDARGSTSAILNVHPV 1026

Query: 713  SKNFARVLAF 722
            S + + VL F
Sbjct: 1027 SNSISIVLFF 1036



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 147/374 (39%), Gaps = 28/374 (7%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS-DQGSY 102
           V   +KK+   C   G P P   W  +G  I+ S        G +L++ +   + D GSY
Sbjct: 52  VGSEDKKITFNCEARGNPSPHYRWQLNGSDIDLSLEYRYKLIGGNLVVINPNRNWDIGSY 111

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEI 157
            C  +N +G   S    L       F T     ++  E + V   C   G P    E   
Sbjct: 112 QCFATNSLGTVVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLC---GPPPHSGELSY 168

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDVYVN 213
            W+ N  P S    + RR V      + I  +  SD GNY C  T+ +    V       
Sbjct: 169 AWIFNEYP-SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSMVTNARVLGSPTPL 227

Query: 214 VL-------AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           VL        + P+I  + P+      G TV L C   G P P++NW  +       +  
Sbjct: 228 VLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIK 287

Query: 266 ILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
           + +  G L+I +    DSG Y C A N  G     G LT     H     +D E+    +
Sbjct: 288 LRKFNGILEIPNFQQEDSGSYECIAENSRGKNVARGRLTYYAKPHWVQTIKDIEIAVEDN 347

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             + C A   P  K S  WL+  E +  E     +Q  + +LT++  +  DSG + C A+
Sbjct: 348 LYWECRASGKP--KPSYRWLKNGEALVLEER---IQIENGALTISNLNVTDSGMFQCIAE 402

Query: 385 TELDFIEAQATLTV 398
            +   + + A L V
Sbjct: 403 NKHGLVYSSAELKV 416



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 125/300 (41%), Gaps = 32/300 (10%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +E++ +TF C+A G P P   W  NG  I  +     + +G
Sbjct: 35  LLQGPVFIKEPSNSIFPVGSEDKKITFNCEARGNPSPHYRWQLNGSDIDLSLEYRYKLIG 94

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N + I   R  D G+Y C ATNSLG V         A+        +   +V +G+ VV
Sbjct: 95  GNLVVINPNRNWDIGSYQCFATNSLGTVVSREAKLQFAYLENFKTKMRSTVSVREGQGVV 154

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        WI N+     E    R+   ETG L I  V  +D G YTC 
Sbjct: 155 LLC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCV 210

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
             + +  A+  GS   L ++    + +         PE      G +    C A+ +P  
Sbjct: 211 VTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVP 270

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +++  W R S+ + F S+ +  + N   L +    + DSG Y C A+       A+  LT
Sbjct: 271 QIN--WRR-SDGLPFSSKIKLRKFNGI-LEIPNFQQEDSGSYECIAENSRGKNVARGRLT 326


>gi|351709949|gb|EHB12868.1| Contactin-5, partial [Heterocephalus glaber]
          Length = 922

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 157/609 (25%), Positives = 258/609 (42%), Gaps = 45/609 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           A +   V++ C   G P+P   W K    I    R+ +      L I +V+  D G Y C
Sbjct: 134 AAKGTTVKMECFALGNPVPTITWMKANGYIPGKSRLRKSQ--AVLEIPNVQLDDAGIYEC 191

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N  G+  S+   L +   P++  +           + +ECKA+G P P   W+ NG 
Sbjct: 192 RAENARGK-NSFRGQLQIYTYPHWVEKLNDTQLDSGSALQWECKATGKPRPTYRWLKNGV 250

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--EIT 222
           P+    P  R       + I ++ +SD+G Y C A N  G +Y    + +LA AP   + 
Sbjct: 251 PLL---PQNRVNTANGVLMIHSVNQSDSGMYQCLAENKYGAIYASAELKILASAPTFALN 307

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           +  K       + V++ C+  G+PKP ++W    K +    R  IL  G+L+I + + +D
Sbjct: 308 QLKKTIIVTKNREVIIECKPQGSPKPNISWKKGDKAVRENKRLAILPDGNLRILNASKSD 367

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G Y C   N  G+A+   S++VKE T I   P+  E+  G+S    C A+ D SL ++ 
Sbjct: 368 EGNYVCKGENIFGSAEIVASVSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVNF 427

Query: 342 VWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A L
Sbjct: 428 YWTLKGQPIDFEKEGGHFENIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAEL 487

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKDGE 449
            V+ P   P    +++ I    A +SW+P +          Y +Q        W      
Sbjct: 488 LVRGP-PGPPGIVIVEEITESTATLSWSPAADN--HSPISSYNLQARSPFSLGWQTVK-- 542

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQ 508
            ++ E I    ES    VD   P  +   RV+A N    G PS     + T E VP    
Sbjct: 543 -TVPETITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSTPSRLIRTNEAVPKIAP 599

Query: 509 SLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISDPT 563
           +  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+ +
Sbjct: 600 TNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSEAS 654

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNL 618
               +   + P T + + +  Y   GDG  S+ +        P   P +V+    + + +
Sbjct: 655 KFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEI 714

Query: 619 VISWTAMPE 627
           +++W  + E
Sbjct: 715 LVAWKHIKE 723



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 151/649 (23%), Positives = 235/649 (36%), Gaps = 74/649 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        D  V+      +E  F   + A
Sbjct: 75  NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRDDGVMGEYEPKIEVHFPFTVTA 134

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           A+  TV  EC A G P P I W+     I   P   R +     + I N++  D G Y C
Sbjct: 135 AKGTTVKMECFALGNPVPTITWMKANGYI---PGKSRLRKSQAVLEIPNVQLDDAGIYEC 191

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK 257
            A N+ G       + +  + P   E   D     G  +   C+  G P+P   W+ N  
Sbjct: 192 RAENARGKNSFRGQLQIYTY-PHWVEKLNDTQLDSGSALQWECKATGKPRPTYRWLKNGV 250

Query: 258 ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITDQP 314
            L          G L I  V  +DSG Y C A NK G    S  L +        +    
Sbjct: 251 PLLPQNRVNTANGVLMIHSVNQSDSGMYQCLAENKYGAIYASAELKILASAPTFALNQLK 310

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           +   V   +     C     P  K +I W +G + +      R     D +L +  +S+ 
Sbjct: 311 KTIIVTKNREVIIECKPQGSP--KPNISWKKGDKAV--RENKRLAILPDGNLRILNASKS 366

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR-- 432
           D G Y C+ +      E  A+++V+ P          ++   +  V++   +   SL   
Sbjct: 367 DEGNYVCKGENIFGSAEIVASVSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVN 426

Query: 433 ----------------GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
                           GHF   + Q       +  IR +++         V     +  +
Sbjct: 427 FYWTLKGQPIDFEKEGGHFENIRAQA---SSADLMIRNILLMHAGRYGCRVQTTADSVSD 483

Query: 477 FARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMG 536
            A +L       GPP          G PG V   E   +  S   L W      +  +  
Sbjct: 484 EAELLV-----RGPP----------GPPGIVIVEE---ITESTATLSWSPAADNHSPISS 525

Query: 537 YKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES- 594
           Y ++ +S     +G   ++ +P        SA    L P  +Y   +      G G  S 
Sbjct: 526 YNLQARS--PFSLGWQTVKTVPETITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPST 583

Query: 595 -----KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEA 649
                +    VP   P NV GR    + LVI+W  + E   N   F Y + +R + T   
Sbjct: 584 PSRLIRTNEAVPKIAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT-RG 642

Query: 650 WNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
           W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V
Sbjct: 643 WKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVV 689



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 152/641 (23%), Positives = 253/641 (39%), Gaps = 86/641 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+GVP+ P +R++  N    L+I  V  SD G Y C   N  G A 
Sbjct: 233 CKATGKPRPTYRWLKNGVPLLPQNRVNTAN--GVLMIHSVNQSDSGMYQCLAENKYG-AI 289

Query: 115 SYSIDLSVLA-APYFTVE--PEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
             S +L +LA AP F +    + I   +   V  ECK  G P+P I W    K + +   
Sbjct: 290 YASAELKILASAPTFALNQLKKTIIVTKNREVIIECKPQGSPKPNISWKKGDKAVRE--- 346

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP-EITEAPKDEY 229
           N R  + P+  + I N  KSD GNY C   N  G    ++  +V    P  I   PK   
Sbjct: 347 NKRLAILPDGNLRILNASKSDEGNYVCKGENIFGSA--EIVASVSVKEPTRIELTPKRTE 404

Query: 230 TVDGKTVVLTCRVFGAPKPEVNWIHNQK------ELTGGRYTILE----TGDLKITDVAF 279
              G+++VL C+       +VN+    K      E  GG +  +     + DL I ++  
Sbjct: 405 LTVGESIVLNCKAIHDASLDVNFYWTLKGQPIDFEKEGGHFENIRAQASSADLMIRNILL 464

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE--AGQSATFRCNAVSDPSL 337
             +G Y C  +    +      L V+        P    VE     +AT   +  +D   
Sbjct: 465 MHAGRYGCRVQTTADSVSDEAELLVRGPP---GPPGIVIVEEITESTATLSWSPAADNHS 521

Query: 338 KLSIVWLRGSEPIDF-----ESEPRFVQSN-------------DYSLTVTKSSELDSGQY 379
            +S   L+   P        ++ P  +  +             +Y   V  ++ + +G  
Sbjct: 522 PISSYNLQARSPFSLGWQTVKTVPETITGDMESAMAVDLNPWVEYEFRVVATNPIGTGD- 580

Query: 380 TCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYK 439
                T    I         VP  AP+N +  +     + V++W PVS +   G   GY 
Sbjct: 581 ---PSTPSRLIRTNEA----VPKIAPTNVSG-RSGRRHELVIAWEPVSEEFQNGEGFGYI 632

Query: 440 VQTWTEKDGEGSIRELIVNKGESTTTEVDKFV-------PASKNFARVLAFNGAYNGPPS 492
           V      +G    +E +V     T++E  KF+       P +    +V  +N   +GP S
Sbjct: 633 VAF--RPNGTRGWKEKMV-----TSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFS 685

Query: 493 EIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY-QSVKGTKVG 550
           +I+   + EG P    + ++A  +  S   + W   ++  G   G+++ Y + ++     
Sbjct: 686 QIVVICSAEGEPSAAPTDVKATSVSVSEILVAWKHIKESLGRPQGFEVGYWKDMEQEDAA 745

Query: 551 PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNP 605
             ++     +    T   L GLE +T Y   +  Y  AG G  S  +        P + P
Sbjct: 746 ETVK-----TRGNETFVILTGLEGNTLYHFTVRAYNGAGYGPPSSEVSATTKKSPPSQAP 800

Query: 606 DNV--EGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
            N+  E +GS    + + W  +  + + +    Y++F+R+ 
Sbjct: 801 SNLRWEHQGS---QVSLGWEPVRPLANESEVLGYKVFYRQE 838



 Score = 47.4 bits (111), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  +N++V + C   G+P P   W K    +  + R++    G +L I +   SD+
Sbjct: 310 KKTIIVTKNREVIIECKPQGSPKPNISWKKGDKAVRENKRLAILPDG-NLRILNASKSDE 368

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEI 157
           G+Y C+  N  G A+  +  +SV       + P+       E++   CKA      +   
Sbjct: 369 GNYVCKGENIFGSAEIVA-SVSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVNF 427

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          N R +     + I N+     G YGC
Sbjct: 428 YWTLKGQPIDFEKEGGHFENIRAQASSADLMIRNILLMHAGRYGC 472



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 29/173 (16%)

Query: 232 DGKTVVLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVAFADS 282
           +G+ VVL C    +P P       +W+ N+          R+   ETG+L I+ V  +D 
Sbjct: 31  EGQGVVLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDV 86

Query: 283 GEYTCFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATFRCNA 331
           G Y C  +N +  A+       LT+++   + +     EV          G +    C A
Sbjct: 87  GSYICLVKNTVTNARVLSPPTPLTLRDDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFA 146

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           + +P    +I W++ +  I  +S  R  Q+    L +      D+G Y CRA+
Sbjct: 147 LGNPV--PTITWMKANGYIPGKSRLRKSQA---VLEIPNVQLDDAGIYECRAE 194



 Score = 39.7 bits (91), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 15/199 (7%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P  AP++     V    + +V+W  +  +SL G  +G++V  W + + E +  E +  +G
Sbjct: 697 PSAAPTDVKATSV-SVSEILVAWKHIK-ESL-GRPQGFEVGYWKDMEQEDAA-ETVKTRG 752

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
             T   +      +     V A+NGA  GPPS  +S  T +  P    S        S  
Sbjct: 753 NETFVILTGLEGNTLYHFTVRAYNGAGYGPPSSEVSATTKKSPPSQAPSNLRWEHQGSQV 812

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            L W  V+P      ++GYK+ Y+  +G     ++E        T     +  L  +  Y
Sbjct: 813 SLGWEPVRPLANESEVLGYKVFYRQ-EGHSDSQVIE--------TQKPQAVVPLPDAGVY 863

Query: 579 RIHLAGYTKAGDGAESKYL 597
            I +  Y++ GDG  S  +
Sbjct: 864 IIEIRAYSEGGDGTVSSQI 882


>gi|27652188|gb|AAO17583.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652190|gb|AAO17584.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652192|gb|AAO17585.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652194|gb|AAO17586.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652196|gb|AAO17587.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652198|gb|AAO17588.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652200|gb|AAO17589.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652202|gb|AAO17590.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652204|gb|AAO17591.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652206|gb|AAO17592.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652208|gb|AAO17593.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652210|gb|AAO17594.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652212|gb|AAO17595.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652214|gb|AAO17596.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652216|gb|AAO17597.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652218|gb|AAO17598.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652220|gb|AAO17599.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652222|gb|AAO17600.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652224|gb|AAO17601.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652226|gb|AAO17602.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652228|gb|AAO17603.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652230|gb|AAO17604.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652232|gb|AAO17605.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652234|gb|AAO17606.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652236|gb|AAO17607.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652238|gb|AAO17608.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652240|gb|AAO17609.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652242|gb|AAO17610.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652244|gb|AAO17611.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652246|gb|AAO17612.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652248|gb|AAO17613.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652250|gb|AAO17614.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652252|gb|AAO17615.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652254|gb|AAO17616.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652256|gb|AAO17617.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652258|gb|AAO17618.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652260|gb|AAO17619.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652262|gb|AAO17620.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652264|gb|AAO17621.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652266|gb|AAO17622.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652268|gb|AAO17623.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652270|gb|AAO17624.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652272|gb|AAO17625.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652274|gb|AAO17626.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652276|gb|AAO17627.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652278|gb|AAO17628.1| L1 cell adhesion molecule [Homo sapiens]
 gi|27652280|gb|AAO17629.1| L1 cell adhesion molecule [Homo sapiens]
 gi|81170808|gb|ABB58724.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83627907|gb|ABC25730.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83627913|gb|ABC25735.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83627919|gb|ABC25740.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83627925|gb|ABC25745.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83627931|gb|ABC25750.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83627937|gb|ABC25755.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83627942|gb|ABC25759.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83627948|gb|ABC25764.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83627954|gb|ABC25769.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83627960|gb|ABC25774.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83627966|gb|ABC25779.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83627972|gb|ABC25784.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83627978|gb|ABC25789.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83627984|gb|ABC25794.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83627990|gb|ABC25799.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83627996|gb|ABC25804.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628002|gb|ABC25809.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628008|gb|ABC25814.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628014|gb|ABC25819.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628020|gb|ABC25824.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628026|gb|ABC25829.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628032|gb|ABC25834.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628038|gb|ABC25839.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628044|gb|ABC25844.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628050|gb|ABC25849.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628056|gb|ABC25854.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628062|gb|ABC25859.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628068|gb|ABC25864.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628074|gb|ABC25869.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628080|gb|ABC25874.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628086|gb|ABC25879.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628092|gb|ABC25884.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628098|gb|ABC25889.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628104|gb|ABC25894.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628110|gb|ABC25899.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628116|gb|ABC25904.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628122|gb|ABC25909.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628128|gb|ABC25914.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628134|gb|ABC25919.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628140|gb|ABC25924.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628146|gb|ABC25929.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628152|gb|ABC25934.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628158|gb|ABC25939.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628164|gb|ABC25944.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628170|gb|ABC25949.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628176|gb|ABC25954.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628182|gb|ABC25959.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628188|gb|ABC25964.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628194|gb|ABC25969.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628200|gb|ABC25974.1| L1 cell adhesion molecule [Homo sapiens]
 gi|83628206|gb|ABC25979.1| L1 cell adhesion molecule [Homo sapiens]
          Length = 534

 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 185/392 (47%), Gaps = 17/392 (4%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L +  V   D G Y 
Sbjct: 85  VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLKVGEEDDGEYR 143

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 144 CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 202

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 203 IPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 262

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 263 ADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 322

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 323 DTGRYFCLAANDQNNVTIMANLKVKDATQITQGPRSTIEKKGSRVTFTCQASFDPSLQPS 382

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 383 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 440

Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNP 425
                 VP    S+  L+      +  VSW+P
Sbjct: 441 VGSPGPVPRLVLSDLHLLT---QSQVRVSWSP 469


>gi|20455467|sp|Q05695.3|L1CAM_RAT RecName: Full=Neural cell adhesion molecule L1; Short=N-CAM-L1;
           Short=NCAM-L1; AltName: Full=Nerve-growth
           factor-inducible large external glycoprotein;
           Short=NILE; AltName: CD_antigen=CD171; Flags: Precursor
          Length = 1259

 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 211/469 (44%), Gaps = 15/469 (3%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W     P+ P+DR+   N+ K+L + +V   D G YT
Sbjct: 252 VALQGQSLILECIAEGFPTPTIKWLHPSDPM-PTDRVIYQNHNKTLQLLNVGEEDDGEYT 310

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 311 CLAENSLGSAR-HAYYVTVEAAPYWLQKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 369

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             I +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+     I  
Sbjct: 370 MSIEKVNKDQKYRIEQGSLILSNVQPSDTMVTQCEARNQHGLLLANAYIYVVQLPARILT 429

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
                Y  V+G T  L C+ FGAP P V W+  +    L   R+     G L I D+   
Sbjct: 430 KDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGHLGIRDLQAN 489

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VKE T IT  P     + G   TF C A  DPSL+ S
Sbjct: 490 DTGRYFCQAANDQNNVTILANLQVKEATQITQGPRSTIEKKGARVTFTCQASFDPSLQAS 549

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT-LT 397
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A  L 
Sbjct: 550 ITWRGDGRDLQERGDSDKYFIE--DGQLVIKSLDYSDQGDYSCVASTELDEVESRAQLLV 607

Query: 398 VQVPLEAPS-NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
           V  P   P    +   ++   +  +SW+P   +        Y ++   ++        L 
Sbjct: 608 VGSPGPVPHLELSDRHLLKQSQVHLSWSPA--EDHNSPIEKYDIEFEDKEMAPEKWFSLG 665

Query: 457 VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVP 504
              G  T+T + K  P      RV A N    G PS +  + VTPE  P
Sbjct: 666 KVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 713



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 161/585 (27%), Positives = 251/585 (42%), Gaps = 93/585 (15%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--NLRKSDTGN 194
           A + +++  EC A G P P I W+H   P+    P  R     +  T++  N+ + D G 
Sbjct: 253 ALQGQSLILECIAEGFPTPTIKWLHPSDPM----PTDRVIYQNHNKTLQLLNVGEEDDGE 308

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           Y C A NSLG      YV V A AP   + P+      G+T  L C+V G P+PEV W  
Sbjct: 309 YTCLAENSLGSARHAYYVTVEA-APYWLQKPQSHLYGPGETARLDCQVQGRPQPEVTWRI 367

Query: 255 N----QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH- 309
           N    +K     +Y I E G L +++V  +D+    C ARN+ G    +  + V +    
Sbjct: 368 NGMSIEKVNKDQKYRI-EQGSLILSNVQPSDTMVTQCEARNQHGLLLANAYIYVVQLPAR 426

Query: 310 -ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
            +T   + Y    G +A   C A   P    S+ WL        + E  F  +N + L +
Sbjct: 427 ILTKDNQTYMAVEGSTAYLLCKAFGAPVP--SVQWLDEEGTTVLQDERFFPYANGH-LGI 483

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE-------------APSNFTLIQVID 415
                 D+G+Y C+A  + + +   A L V+   +             A   FT     D
Sbjct: 484 RDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITQGPRSTIEKKGARVTFTCQASFD 543

Query: 416 -AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSIREL-IVNKGEST---TTE 466
            + +A ++W        RG  R  + +  ++K    DG+  I+ L   ++G+ +   +TE
Sbjct: 544 PSLQASITW--------RGDGRDLQERGDSDKYFIEDGQLVIKSLDYSDQGDYSCVASTE 595

Query: 467 VDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP---LGSSAFYLK 523
           +D+     ++ A++L                    G PG V  LE      L  S  +L 
Sbjct: 596 LDEV----ESRAQLLVV------------------GSPGPVPHLELSDRHLLKQSQVHLS 633

Query: 524 WVKPEQPNGVLMGYKIKYQSVKGTKVGP----LLERLPYISDPTTTSAKLAGLEPSTKYR 579
           W   E  N  +  Y I+++     ++ P     L ++P   + T+T+ KL+   P   Y 
Sbjct: 634 WSPAEDHNSPIEKYDIEFED---KEMAPEKWFSLGKVP--GNQTSTTLKLS---PYVHYT 685

Query: 580 IHLAGYTKAGDGAESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAP 633
             +    K G G  S     V      P KNP +V G G+  NN+VI+W  +  ++ NAP
Sbjct: 686 FRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAP 745

Query: 634 HFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
             +YR+ WR     E W +  V D     LV++N  TF PYEIKV
Sbjct: 746 QIQYRVQWRPLGKQETWKEQTVSD---PFLVVSNTSTFVPYEIKV 787



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 167/688 (24%), Positives = 269/688 (39%), Gaps = 78/688 (11%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPINPSD-----RISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+ I   +     RI QG    SLI+ +V+ SD     CE  
Sbjct: 351  LDCQVQGRPQPEVTWRINGMSIEKVNKDQKYRIEQG----SLILSNVQPSDTMVTQCEAR 406

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + +   A E  T    CKA G P P + W+   G 
Sbjct: 407  NQHGLLLANAY-IYVVQLPARILTKDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGT 465

Query: 165  PISQAPPNPRRKVGP---NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q       +  P     + I +L+ +DTG Y C A N    V   +  N+ +  A +
Sbjct: 466  TVLQ-----DERFFPYANGHLGIRDLQANDTGRYFCQAANDQNNV--TILANLQVKEATQ 518

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWIHNQKELT----GGRYTILETGDLKI 274
            IT+ P+      G  V  TC+    P  +  + W  + ++L       +Y I E G L I
Sbjct: 519  ITQGPRSTIEKKGARVTFTCQASFDPSLQASITWRGDGRDLQERGDSDKYFI-EDGQLVI 577

Query: 275  TDVAFADSGEYTCFARNKLGTAQGSGSLTVK------EHTHITDQP--EDYEVEAGQSAT 326
              + ++D G+Y+C A  +L   +    L V        H  ++D+   +  +V    S  
Sbjct: 578  KSLDYSDQGDYSCVASTELDEVESRAQLLVVGSPGPVPHLELSDRHLLKQSQVHLSWSPA 637

Query: 327  FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF----VQSNDYSLTVTKSSELDSGQYTCR 382
               N+   P  K  I +    E  +   E  F    V  N  S T+  S  +    YT R
Sbjct: 638  EDHNS---PIEKYDIEF----EDKEMAPEKWFSLGKVPGNQTSTTLKLSPYV---HYTFR 687

Query: 383  AQTELDFIEAQ---ATLTVQVPLEAPSNFTLI---QVIDAKKAVVSWNPVSPQSLRGHFR 436
                  +   +    + TV  P  AP    +    +  +    V++W P+          
Sbjct: 688  VTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAPQI 747

Query: 437  GYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS 496
             Y+VQ W     + + +E  V+      +    FVP      +V A N    GP  ++  
Sbjct: 748  QYRVQ-WRPLGKQETWKEQTVSDPFLVVSNTSTFVPYE---IKVQAVNNQGKGPEPQVTI 803

Query: 497  FVTPEGVPGTVQSLEAIPL-GSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVKGTKVGP 551
              + E  P     LE I +  SS   ++W  V   Q  G L GY + Y  +  +      
Sbjct: 804  GYSGEDYPQVSPELEDITIFNSSTVLVRWRPVDLAQVKGHLRGYNVTYWWKGSQRKHSKR 863

Query: 552  LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF---KNPDNV 608
             + +   +    TTSA L+GL P + Y + +  +   G G  S++ F  P     +P+ +
Sbjct: 864  HVHKSHMVVPANTTSAILSGLRPYSSYHVEVQAFNGRGLGPASEWTFSTPEGVPGHPEAL 923

Query: 609  EGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQ 668
                 +  +L++ W   P + HN     Y + +   + GE+  Q    +    EL   N 
Sbjct: 924  HLECQSDTSLLLHW--QPPLSHNGVLTGYLLSYHPLD-GESKEQ-LFFNLSDPELRTHNL 979

Query: 669  PTFQP---YEIKVVQTWTEKDGEGSIRE 693
                P   Y  ++  T  +  GE  +RE
Sbjct: 980  TNLNPDLQYRFQLQATTHQGPGEAIVRE 1007



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 94/387 (24%), Positives = 164/387 (42%), Gaps = 31/387 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLIIK-HVE 95
           ++ V      + L C   G P  +  W+KDG+   P +     + +  Y  S  I+ +  
Sbjct: 43  RRLVVFPTDDISLKCEARGRPQVEFRWTKDGIHFKPKEELGVVVHEAPYSGSFTIEGNNS 102

Query: 96  FSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKAS 150
           F+   QG Y C  SN +G A S+ I L    AP +   TV+P  +   E   +      S
Sbjct: 103 FAQRFQGIYRCYASNNLGTAMSHEIQLVAEGAPKWPKETVKPVEVEEGESVVLPCNPPPS 162

Query: 151 GLPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLGYV 206
             P   I+W+ N K I     + R  +G N  +   N+  SD   +Y CNA    +   +
Sbjct: 163 AAPL-RIYWM-NSK-ILHIKQDERVSMGQNGDLYFANVLTSDNHSDYICNAHFPGTRTII 219

Query: 207 YK---DVYV----NVLAHAPEI---TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
            K   D+ V    +++   P +   T +      + G++++L C   G P P + W+H  
Sbjct: 220 QKEPIDLRVKPTNSMIDRKPRLLFPTNSSSHLVALQGQSLILECIAEGFPTPTIKWLHPS 279

Query: 257 KELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE 315
             +   R         L++ +V   D GEYTC A N LG+A+ +  +TV+   +   +P+
Sbjct: 280 DPMPTDRVIYQNHNKTLQLLNVGEEDDGEYTCLAENSLGSARHAYYVTVEAAPYWLQKPQ 339

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
            +    G++A   C     P  +  + W      I+  ++ +  +    SL ++     D
Sbjct: 340 SHLYGPGETARLDCQVQGRP--QPEVTWRINGMSIEKVNKDQKYRIEQGSLILSNVQPSD 397

Query: 376 SGQYTCRAQTELDFIEAQATL-TVQVP 401
           +    C A+ +   + A A +  VQ+P
Sbjct: 398 TMVTQCEARNQHGLLLANAYIYVVQLP 424


>gi|301779003|ref|XP_002924918.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
           [Ailuropoda melanoleuca]
          Length = 1225

 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 183/713 (25%), Positives = 303/713 (42%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+   + L C   G P PQ  W+K G  + P  R ++ NY K+L I++V + D+G+Y C 
Sbjct: 269 LKGDTLLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYSKTLKIENVSYRDRGNYRCT 327

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            +N +G + ++   + V   P +T +P+    +   +    C+A G PEP I W  NG P
Sbjct: 328 ANNFLG-STTHDFHVIVEEPPRWTKKPQSGVYSTGSSGILLCEAEGEPEPTIKWRVNGSP 386

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEA 224
           I + P      V P  I+  NL+ + T  Y C A+N  G +  +  ++V+   P I TE 
Sbjct: 387 IDRNP-FAGDVVSPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQTED 445

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            ++  TV G +  L C  F +P+  V+W  +   K L G RY + E G L+I      D+
Sbjct: 446 EENYATVAGYSAFLHCEFFASPEAIVSWQKVEEAKPLEGRRYHVYENGTLQINKTTEDDA 505

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N  G    + +L ++  T +   P++  V    +    C +  DP LK  L 
Sbjct: 506 GSYSCWVENAKGKTAVTANLDIRNATKLQVAPKNPRVPRLHALELHCESTCDPHLKQSLK 565

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W R  E  +   +E   +  +  +LT++  +  D G Y+C AQT LD +     +TV 
Sbjct: 566 LSWSRNGEAFEINATEDGRIIIDGANLTISNVTSEDQGIYSCSAQTALDSVTDATQVTV- 624

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
             L+ P     +Q+ + +   V     +      H   Y V+    K+  G   EL   +
Sbjct: 625 --LDVPDPPESLQLSERQNRSVRLTWEAGDDHNSHISDYIVEFEGNKEEPGRWEELARVQ 682

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 683 GKETTITL-SLAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQP 741

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 742 KEMIIKWEPLKSMEQNGPGLEYRVSWKP-QGAPV--------EWEEETVTNHTLRVMTPT 792

Query: 576 T--KYRIHLAGYTKAGDGAESK-YLFYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +      G G E +  + Y     PD    + G     + L  ++W+ +P+ 
Sbjct: 793 VYAPYDVQVQAINHLGSGPEPQSVILYSGEDYPDTAPVIHGVDVINSTLAKVTWSTIPKD 852

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ +++ ++ +   
Sbjct: 853 RVHGHLKGYQINW--------WKTKSLLDGRT-----------HPKEVNILR-FSGQRNY 892

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
           G +  L            D F   S+    VLA+N    GP SE   F TPEG
Sbjct: 893 GMVPSL------------DAF---SEFHLTVLAYNSKGAGPESEPYIFQTPEG 930



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 136/575 (23%), Positives = 230/575 (40%), Gaps = 51/575 (8%)

Query: 53   LFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L C F  +P     W K  +  P+    R        +L I      D GSY+C V N  
Sbjct: 459  LHCEFFASPEAIVSWQKVEEAKPL--EGRRYHVYENGTLQINKTTEDDAGSYSCWVENAK 516

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE----IHWVHNGKPI 166
            G+  + + +L +  A    V P+         +   C+++  P  +    + W  NG+  
Sbjct: 517  GKT-AVTANLDIRNATKLQVAPKNPRVPRLHALELHCESTCDPHLKQSLKLSWSRNGEAF 575

Query: 167  S-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVL--AHAPEITE 223
               A  + R  +    +TI N+   D G Y C+A  +L  V     V VL     PE  +
Sbjct: 576  EINATEDGRIIIDGANLTISNVTSEDQGIYSCSAQTALDSVTDATQVTVLDVPDPPESLQ 635

Query: 224  APKDEYTVDGKTVVLTCRVFGAPKPE-----VNWIHNQKELTGGRYTILETGDLKITDVA 278
              + +     ++V LT               V +  N++E   GR+  L     K T + 
Sbjct: 636  LSERQ----NRSVRLTWEAGDDHNSHISDYIVEFEGNKEE--PGRWEELARVQGKETTIT 689

Query: 279  FADSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSAT------ 326
             + +     ++   A N++G +Q S      E         P++  V+A Q         
Sbjct: 690  LSLAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWE 749

Query: 327  -FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
              +    + P L+  + W     P+++E E       +++L V   +         +A  
Sbjct: 750  PLKSMEQNGPGLEYRVSWKPQGAPVEWEEE----TVTNHTLRVMTPTVYAPYDVQVQAIN 805

Query: 386  ELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKAVVSWNPVSPQSLRGHFRGYKVQT 442
             L       ++ +    + P    +I    VI++  A V+W+ +    + GH +GY++  
Sbjct: 806  HLGSGPEPQSVILYSGEDYPDTAPVIHGVDVINSTLAKVTWSTIPKDRVHGHLKGYQINW 865

Query: 443  WTEK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
            W  K   DG    +E+ + +  G+     V      S+    VLA+N    GP SE   F
Sbjct: 866  WKTKSLLDGRTHPKEVNILRFSGQRNYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIF 925

Query: 498  VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERL 556
             TPEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T ++G L +  
Sbjct: 926  QTPEGVPEQPAFLKVIKVDKDTATLTWGLPKKLNGNLTGYLLQYQIINDTYELGELNDI- 984

Query: 557  PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
              I+ P+  S +L+ L  +TKY+ +L   T  G G
Sbjct: 985  -NITTPSKPSWRLSNLNATTKYKFYLRACTSKGCG 1018



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 165/424 (38%), Gaps = 56/424 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSNGVG 111
           C   G P P  +W+KD  P + SD   I+  N G   I      S  QG Y C  SN +G
Sbjct: 57  CEAKGNPEPTFMWTKDDKPFDLSDSRIIASNNSGTFKIPNEGHISHFQGKYRCFASNKLG 116

Query: 112 EAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKPISQ 168
            A S  I+  V   P F  E  + +   E + +   C    GLP   I+W++   + I Q
Sbjct: 117 VAMSEEIEFIVPNVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEHIEQ 176

Query: 169 APPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA---- 218
                  + G   +   N+ + D+ N Y C A        +  +   + VN L HA    
Sbjct: 177 DERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLRHANDSS 234

Query: 219 ----------------PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWIHNQ 256
                           P +   P +  +      + G T++L C   G P P+V+W    
Sbjct: 235 SSTEIGSKANSIKQRKPRLLLPPPESGSESSVTILKGDTLLLECFAEGLPTPQVDWNKIG 294

Query: 257 KELTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE 315
            +L  GR T    +  LKI +V++ D G Y C A N LG+      + V+E    T +P+
Sbjct: 295 GDLPKGRETKENYSKTLKIENVSYRDRGNYRCTANNFLGSTTHDFHVIVEEPPRWTKKPQ 354

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID---FESE---PRFVQSNDY--SLT 367
                 G S    C A  +P  + +I W     PID   F  +   PR +   +   + T
Sbjct: 355 SGVYSTGSSGILLCEAEGEP--EPTIKWRVNGSPIDRNPFAGDVVSPREISFTNLQPNHT 412

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDAKKAVVS 422
                E  +   T  A   +D ++ +  +  +       +   S F   +   + +A+VS
Sbjct: 413 AVYQCEASNVHGTILANANIDVVDVRPLIQTEDEENYATVAGYSAFLHCEFFASPEAIVS 472

Query: 423 WNPV 426
           W  V
Sbjct: 473 WQKV 476



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 77/190 (40%), Gaps = 10/190 (5%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKP--ISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +E    EC+A G PEP   W  + KP  +S +        G  +I  E       G Y C
Sbjct: 50  DEYFLIECEAKGNPEPTFMWTKDDKPFDLSDSRIIASNNSGTFKIPNEGHISHFQGKYRC 109

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN 255
            A+N LG    +    ++ + P+  +   D   V +G  +VL C    G P   + W++ 
Sbjct: 110 FASNKLGVAMSEEIEFIVPNVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNI 169

Query: 256 QKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTH 309
           + E      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV    H
Sbjct: 170 ELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLRH 229

Query: 310 ITDQPEDYEV 319
             D     E+
Sbjct: 230 ANDSSSSTEI 239


>gi|8393820|ref|NP_059041.1| neural cell adhesion molecule L1 precursor [Rattus norvegicus]
 gi|56741|emb|CAA41860.1| neural cell adhesion molecule L1 [Rattus norvegicus]
          Length = 1255

 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 211/469 (44%), Gaps = 15/469 (3%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W     P+ P+DR+   N+ K+L + +V   D G YT
Sbjct: 252 VALQGQSLILECIAEGFPTPTIKWLHPSDPM-PTDRVIYQNHNKTLQLLNVGEEDDGEYT 310

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 311 CLAENSLGSAR-HAYYVTVEAAPYWLQKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 369

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             I +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+     I  
Sbjct: 370 MSIEKVNKDQKYRIEQGSLILSNVQPSDTMVTQCEARNQHGLLLANAYIYVVQLPARILT 429

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
                Y  V+G T  L C+ FGAP P V W+  +    L   R+     G L I D+   
Sbjct: 430 KDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGHLGIRDLQAN 489

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VKE T IT  P     + G   TF C A  DPSL+ S
Sbjct: 490 DTGRYFCQAANDQNNVTILANLQVKEATQITQGPRSTIEKKGARVTFTCQASFDPSLQAS 549

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT-LT 397
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A  L 
Sbjct: 550 ITWRGDGRDLQERGDSDKYFIE--DGQLVIKSLDYSDQGDYSCVASTELDEVESRAQLLV 607

Query: 398 VQVPLEAPS-NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
           V  P   P    +   ++   +  +SW+P   +        Y ++   ++        L 
Sbjct: 608 VGSPGPVPHLELSDRHLLKQSQVHLSWSPA--EDHNSPIEKYDIEFEDKEMAPEKWFSLG 665

Query: 457 VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVP 504
              G  T+T + K  P      RV A N    G PS +  + VTPE  P
Sbjct: 666 KVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 713



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 161/585 (27%), Positives = 251/585 (42%), Gaps = 93/585 (15%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--NLRKSDTGN 194
           A + +++  EC A G P P I W+H   P+    P  R     +  T++  N+ + D G 
Sbjct: 253 ALQGQSLILECIAEGFPTPTIKWLHPSDPM----PTDRVIYQNHNKTLQLLNVGEEDDGE 308

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           Y C A NSLG      YV V A AP   + P+      G+T  L C+V G P+PEV W  
Sbjct: 309 YTCLAENSLGSARHAYYVTVEA-APYWLQKPQSHLYGPGETARLDCQVQGRPQPEVTWRI 367

Query: 255 N----QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH- 309
           N    +K     +Y I E G L +++V  +D+    C ARN+ G    +  + V +    
Sbjct: 368 NGMSIEKVNKDQKYRI-EQGSLILSNVQPSDTMVTQCEARNQHGLLLANAYIYVVQLPAR 426

Query: 310 -ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
            +T   + Y    G +A   C A   P    S+ WL        + E  F  +N + L +
Sbjct: 427 ILTKDNQTYMAVEGSTAYLLCKAFGAPVP--SVQWLDEEGTTVLQDERFFPYANGH-LGI 483

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE-------------APSNFTLIQVID 415
                 D+G+Y C+A  + + +   A L V+   +             A   FT     D
Sbjct: 484 RDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITQGPRSTIEKKGARVTFTCQASFD 543

Query: 416 -AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSIREL-IVNKGEST---TTE 466
            + +A ++W        RG  R  + +  ++K    DG+  I+ L   ++G+ +   +TE
Sbjct: 544 PSLQASITW--------RGDGRDLQERGDSDKYFIEDGQLVIKSLDYSDQGDYSCVASTE 595

Query: 467 VDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP---LGSSAFYLK 523
           +D+     ++ A++L                    G PG V  LE      L  S  +L 
Sbjct: 596 LDEV----ESRAQLLVV------------------GSPGPVPHLELSDRHLLKQSQVHLS 633

Query: 524 WVKPEQPNGVLMGYKIKYQSVKGTKVGP----LLERLPYISDPTTTSAKLAGLEPSTKYR 579
           W   E  N  +  Y I+++     ++ P     L ++P   + T+T+ KL+   P   Y 
Sbjct: 634 WSPAEDHNSPIEKYDIEFED---KEMAPEKWFSLGKVP--GNQTSTTLKLS---PYVHYT 685

Query: 580 IHLAGYTKAGDGAESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAP 633
             +    K G G  S     V      P KNP +V G G+  NN+VI+W  +  ++ NAP
Sbjct: 686 FRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAP 745

Query: 634 HFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
             +YR+ WR     E W +  V D     LV++N  TF PYEIKV
Sbjct: 746 QIQYRVQWRPLGKQETWKEQTVSD---PFLVVSNTSTFVPYEIKV 787



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 167/688 (24%), Positives = 269/688 (39%), Gaps = 78/688 (11%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPINPSD-----RISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+ I   +     RI QG    SLI+ +V+ SD     CE  
Sbjct: 351  LDCQVQGRPQPEVTWRINGMSIEKVNKDQKYRIEQG----SLILSNVQPSDTMVTQCEAR 406

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + +   A E  T    CKA G P P + W+   G 
Sbjct: 407  NQHGLLLANAY-IYVVQLPARILTKDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGT 465

Query: 165  PISQAPPNPRRKVGP---NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q       +  P     + I +L+ +DTG Y C A N    V   +  N+ +  A +
Sbjct: 466  TVLQ-----DERFFPYANGHLGIRDLQANDTGRYFCQAANDQNNV--TILANLQVKEATQ 518

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWIHNQKELT----GGRYTILETGDLKI 274
            IT+ P+      G  V  TC+    P  +  + W  + ++L       +Y I E G L I
Sbjct: 519  ITQGPRSTIEKKGARVTFTCQASFDPSLQASITWRGDGRDLQERGDSDKYFI-EDGQLVI 577

Query: 275  TDVAFADSGEYTCFARNKLGTAQGSGSLTVK------EHTHITDQP--EDYEVEAGQSAT 326
              + ++D G+Y+C A  +L   +    L V        H  ++D+   +  +V    S  
Sbjct: 578  KSLDYSDQGDYSCVASTELDEVESRAQLLVVGSPGPVPHLELSDRHLLKQSQVHLSWSPA 637

Query: 327  FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF----VQSNDYSLTVTKSSELDSGQYTCR 382
               N+   P  K  I +    E  +   E  F    V  N  S T+  S  +    YT R
Sbjct: 638  EDHNS---PIEKYDIEF----EDKEMAPEKWFSLGKVPGNQTSTTLKLSPYV---HYTFR 687

Query: 383  AQTELDFIEAQ---ATLTVQVPLEAPSNFTLI---QVIDAKKAVVSWNPVSPQSLRGHFR 436
                  +   +    + TV  P  AP    +    +  +    V++W P+          
Sbjct: 688  VTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAPQI 747

Query: 437  GYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS 496
             Y+VQ W     + + +E  V+      +    FVP      +V A N    GP  ++  
Sbjct: 748  QYRVQ-WRPLGKQETWKEQTVSDPFLVVSNTSTFVPYE---IKVQAVNNQGKGPEPQVTI 803

Query: 497  FVTPEGVPGTVQSLEAIPL-GSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVKGTKVGP 551
              + E  P     LE I +  SS   ++W  V   Q  G L GY + Y  +  +      
Sbjct: 804  GYSGEDYPQVSPELEDITIFNSSTVLVRWRPVDLAQVKGHLRGYNVTYWWKGSQRKHSKR 863

Query: 552  LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF---KNPDNV 608
             + +   +    TTSA L+GL P + Y + +  +   G G  S++ F  P     +P+ +
Sbjct: 864  HVHKSHMVVPANTTSAILSGLRPYSSYHVEVQAFNGRGLGPASEWTFSTPEGVPGHPEAL 923

Query: 609  EGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQ 668
                 +  +L++ W   P + HN     Y + +   + GE+  Q    +    EL   N 
Sbjct: 924  HLECQSDTSLLLHW--QPPLSHNGVLTGYLLSYHPLD-GESKEQ-LFFNLSDPELRTHNL 979

Query: 669  PTFQP---YEIKVVQTWTEKDGEGSIRE 693
                P   Y  ++  T  +  GE  +RE
Sbjct: 980  TNLNPDLQYRFQLQATTHQGPGEAIVRE 1007



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 94/387 (24%), Positives = 164/387 (42%), Gaps = 31/387 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLIIK-HVE 95
           ++ V      + L C   G P  +  W+KDG+   P +     + +  Y  S  I+ +  
Sbjct: 43  RRLVVFPTDDISLKCEARGRPQVEFRWTKDGIHFKPKEELGVVVHEAPYSGSFTIEGNNS 102

Query: 96  FSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKAS 150
           F+   QG Y C  SN +G A S+ I L    AP +   TV+P  +   E   +      S
Sbjct: 103 FAQRFQGIYRCYASNNLGTAMSHEIQLVAEGAPKWPKETVKPVEVEEGESVVLPCNPPPS 162

Query: 151 GLPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLGYV 206
             P   I+W+ N K I     + R  +G N  +   N+  SD   +Y CNA    +   +
Sbjct: 163 AAPL-RIYWM-NSK-ILHIKQDERVSMGQNGDLYFANVLTSDNHSDYICNAHFPGTRTII 219

Query: 207 YK---DVYV----NVLAHAPEI---TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
            K   D+ V    +++   P +   T +      + G++++L C   G P P + W+H  
Sbjct: 220 QKEPIDLRVKPTNSMIDRKPRLLFPTNSSSHLVALQGQSLILECIAEGFPTPTIKWLHPS 279

Query: 257 KELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE 315
             +   R         L++ +V   D GEYTC A N LG+A+ +  +TV+   +   +P+
Sbjct: 280 DPMPTDRVIYQNHNKTLQLLNVGEEDDGEYTCLAENSLGSARHAYYVTVEAAPYWLQKPQ 339

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
            +    G++A   C     P  +  + W      I+  ++ +  +    SL ++     D
Sbjct: 340 SHLYGPGETARLDCQVQGRP--QPEVTWRINGMSIEKVNKDQKYRIEQGSLILSNVQPSD 397

Query: 376 SGQYTCRAQTELDFIEAQATL-TVQVP 401
           +    C A+ +   + A A +  VQ+P
Sbjct: 398 TMVTQCEARNQHGLLLANAYIYVVQLP 424


>gi|281350365|gb|EFB25949.1| hypothetical protein PANDA_014328 [Ailuropoda melanoleuca]
          Length = 1195

 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 183/713 (25%), Positives = 303/713 (42%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+   + L C   G P PQ  W+K G  + P  R ++ NY K+L I++V + D+G+Y C 
Sbjct: 239 LKGDTLLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYSKTLKIENVSYRDRGNYRCT 297

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            +N +G + ++   + V   P +T +P+    +   +    C+A G PEP I W  NG P
Sbjct: 298 ANNFLG-STTHDFHVIVEEPPRWTKKPQSGVYSTGSSGILLCEAEGEPEPTIKWRVNGSP 356

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEA 224
           I + P      V P  I+  NL+ + T  Y C A+N  G +  +  ++V+   P I TE 
Sbjct: 357 IDRNP-FAGDVVSPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQTED 415

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            ++  TV G +  L C  F +P+  V+W  +   K L G RY + E G L+I      D+
Sbjct: 416 EENYATVAGYSAFLHCEFFASPEAIVSWQKVEEAKPLEGRRYHVYENGTLQINKTTEDDA 475

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N  G    + +L ++  T +   P++  V    +    C +  DP LK  L 
Sbjct: 476 GSYSCWVENAKGKTAVTANLDIRNATKLQVAPKNPRVPRLHALELHCESTCDPHLKQSLK 535

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W R  E  +   +E   +  +  +LT++  +  D G Y+C AQT LD +     +TV 
Sbjct: 536 LSWSRNGEAFEINATEDGRIIIDGANLTISNVTSEDQGIYSCSAQTALDSVTDATQVTV- 594

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
             L+ P     +Q+ + +   V     +      H   Y V+    K+  G   EL   +
Sbjct: 595 --LDVPDPPESLQLSERQNRSVRLTWEAGDDHNSHISDYIVEFEGNKEEPGRWEELARVQ 652

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 653 GKETTITL-SLAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQP 711

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 712 KEMIIKWEPLKSMEQNGPGLEYRVSWKP-QGAPV--------EWEEETVTNHTLRVMTPT 762

Query: 576 T--KYRIHLAGYTKAGDGAESK-YLFYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +      G G E +  + Y     PD    + G     + L  ++W+ +P+ 
Sbjct: 763 VYAPYDVQVQAINHLGSGPEPQSVILYSGEDYPDTAPVIHGVDVINSTLAKVTWSTIPKD 822

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ +++ ++ +   
Sbjct: 823 RVHGHLKGYQINW--------WKTKSLLDGRT-----------HPKEVNILR-FSGQRNY 862

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
           G +  L            D F   S+    VLA+N    GP SE   F TPEG
Sbjct: 863 GMVPSL------------DAF---SEFHLTVLAYNSKGAGPESEPYIFQTPEG 900



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 136/575 (23%), Positives = 230/575 (40%), Gaps = 51/575 (8%)

Query: 53  LFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
           L C F  +P     W K  +  P+    R        +L I      D GSY+C V N  
Sbjct: 429 LHCEFFASPEAIVSWQKVEEAKPL--EGRRYHVYENGTLQINKTTEDDAGSYSCWVENAK 486

Query: 111 GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE----IHWVHNGKPI 166
           G+  + + +L +  A    V P+         +   C+++  P  +    + W  NG+  
Sbjct: 487 GKT-AVTANLDIRNATKLQVAPKNPRVPRLHALELHCESTCDPHLKQSLKLSWSRNGEAF 545

Query: 167 S-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVL--AHAPEITE 223
              A  + R  +    +TI N+   D G Y C+A  +L  V     V VL     PE  +
Sbjct: 546 EINATEDGRIIIDGANLTISNVTSEDQGIYSCSAQTALDSVTDATQVTVLDVPDPPESLQ 605

Query: 224 APKDEYTVDGKTVVLTCRVFGAPKPE-----VNWIHNQKELTGGRYTILETGDLKITDVA 278
             + +     ++V LT               V +  N++E   GR+  L     K T + 
Sbjct: 606 LSERQ----NRSVRLTWEAGDDHNSHISDYIVEFEGNKEE--PGRWEELARVQGKETTIT 659

Query: 279 FADSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSAT------ 326
            + +     ++   A N++G +Q S      E         P++  V+A Q         
Sbjct: 660 LSLAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWE 719

Query: 327 -FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
             +    + P L+  + W     P+++E E       +++L V   +         +A  
Sbjct: 720 PLKSMEQNGPGLEYRVSWKPQGAPVEWEEE----TVTNHTLRVMTPTVYAPYDVQVQAIN 775

Query: 386 ELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKAVVSWNPVSPQSLRGHFRGYKVQT 442
            L       ++ +    + P    +I    VI++  A V+W+ +    + GH +GY++  
Sbjct: 776 HLGSGPEPQSVILYSGEDYPDTAPVIHGVDVINSTLAKVTWSTIPKDRVHGHLKGYQINW 835

Query: 443 WTEK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
           W  K   DG    +E+ + +  G+     V      S+    VLA+N    GP SE   F
Sbjct: 836 WKTKSLLDGRTHPKEVNILRFSGQRNYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIF 895

Query: 498 VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERL 556
            TPEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T ++G L +  
Sbjct: 896 QTPEGVPEQPAFLKVIKVDKDTATLTWGLPKKLNGNLTGYLLQYQIINDTYELGELNDI- 954

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             I+ P+  S +L+ L  +TKY+ +L   T  G G
Sbjct: 955 -NITTPSKPSWRLSNLNATTKYKFYLRACTSKGCG 988



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 165/424 (38%), Gaps = 56/424 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSNGVG 111
           C   G P P  +W+KD  P + SD   I+  N G   I      S  QG Y C  SN +G
Sbjct: 27  CEAKGNPEPTFMWTKDDKPFDLSDSRIIASNNSGTFKIPNEGHISHFQGKYRCFASNKLG 86

Query: 112 EAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKPISQ 168
            A S  I+  V   P F  E  + +   E + +   C    GLP   I+W++   + I Q
Sbjct: 87  VAMSEEIEFIVPNVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEHIEQ 146

Query: 169 APPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA---- 218
                  + G   +   N+ + D+ N Y C A        +  +   + VN L HA    
Sbjct: 147 DERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLRHANDSS 204

Query: 219 ----------------PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWIHNQ 256
                           P +   P +  +      + G T++L C   G P P+V+W    
Sbjct: 205 SSTEIGSKANSIKQRKPRLLLPPPESGSESSVTILKGDTLLLECFAEGLPTPQVDWNKIG 264

Query: 257 KELTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE 315
            +L  GR T    +  LKI +V++ D G Y C A N LG+      + V+E    T +P+
Sbjct: 265 GDLPKGRETKENYSKTLKIENVSYRDRGNYRCTANNFLGSTTHDFHVIVEEPPRWTKKPQ 324

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID---FESE---PRFVQSNDY--SLT 367
                 G S    C A  +P  + +I W     PID   F  +   PR +   +   + T
Sbjct: 325 SGVYSTGSSGILLCEAEGEP--EPTIKWRVNGSPIDRNPFAGDVVSPREISFTNLQPNHT 382

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDAKKAVVS 422
                E  +   T  A   +D ++ +  +  +       +   S F   +   + +A+VS
Sbjct: 383 AVYQCEASNVHGTILANANIDVVDVRPLIQTEDEENYATVAGYSAFLHCEFFASPEAIVS 442

Query: 423 WNPV 426
           W  V
Sbjct: 443 WQKV 446



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 77/190 (40%), Gaps = 10/190 (5%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKP--ISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +E    EC+A G PEP   W  + KP  +S +        G  +I  E       G Y C
Sbjct: 20  DEYFLIECEAKGNPEPTFMWTKDDKPFDLSDSRIIASNNSGTFKIPNEGHISHFQGKYRC 79

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN 255
            A+N LG    +    ++ + P+  +   D   V +G  +VL C    G P   + W++ 
Sbjct: 80  FASNKLGVAMSEEIEFIVPNVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNI 139

Query: 256 QKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTH 309
           + E      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV    H
Sbjct: 140 ELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLRH 199

Query: 310 ITDQPEDYEV 319
             D     E+
Sbjct: 200 ANDSSSSTEI 209


>gi|27652282|gb|AAO17630.1| L1 cell adhesion molecule [Pan troglodytes]
          Length = 534

 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 185/392 (47%), Gaps = 17/392 (4%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L +  V   D G Y 
Sbjct: 85  VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLKVGEEDDGEYR 143

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 144 CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 202

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 203 IPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 262

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 263 ADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 322

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 323 DTGRYFCLAANDQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPS 382

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 383 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 440

Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNP 425
                 VP    S+  L+      +  VSW+P
Sbjct: 441 VGSPGPVPRLVLSDLHLLT---QSQVRVSWSP 469


>gi|149036841|gb|EDL91459.1| rCG56294, isoform CRA_b [Rattus norvegicus]
          Length = 966

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 188/723 (26%), Positives = 295/723 (40%), Gaps = 105/723 (14%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P     +I    +   L I + +  D GSY 
Sbjct: 239 AAKGSTVKLECFALGNPVPQINWRRSDGMPF--PTKIKLRKFNGVLEIPNFQQEDTGSYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A PY+    + +  A E+++ +EC+ASG P+P   W+ NG
Sbjct: 297 CIAENSRGKNVARG-RLTYYAKPYWVQLLKDVETAVEDSLYWECRASGKPKPSYRWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +       R ++    +TI NL  SD+G + C A N  G +Y    + VLA AP+ + 
Sbjct: 356 DALVL---EERIQIENGALTIANLNVSDSGMFQCIAENKHGLIYSSAELKVLASAPDFSR 412

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
            P  +      G  V+L C+   +P+    W      +    R ++L  G LKI +V  A
Sbjct: 413 NPMKKMIQVQVGSLVILDCKPSASPRALSFWKKGDTVVREQARISLLNDGGLKIMNVTKA 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A G+  L V E T I   P + +V  G+S    C    DP L + 
Sbjct: 473 DAGIYTCIAENQFGKANGTTQLVVTEPTRIILAPSNMDVAVGESIILPCQVQHDPLLDIM 532

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 533 FAWYFNGTLTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAAEL 592

Query: 397 TVQVPLEAPSNFTLIQVIDAK---KAVVSWNP---------------------------- 425
            V+VP          + ID K     VV  NP                            
Sbjct: 593 IVRVP----------EAIDGKTRTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRT 642

Query: 426 ------VSPQSLR--GHFRGYKVQTWT----EKDGEGSIRELIVNKGESTTTEV------ 467
                 V+P  +   G  R   V TW     E    G    ++  +    TT +      
Sbjct: 643 EEAAPEVAPSEVSGGGGSRSELVITWDPVPEELQNGGGFGYVVAFRPLGVTTWIQTVVTS 702

Query: 468 ----------DKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQS-LEAIPLG 516
                     +  VP S    +V  +N    GP S + +  + E  P    S + A  L 
Sbjct: 703 PDNPRYVFRNESIVPFSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSHISAHSLS 762

Query: 517 SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
           SS   + W  +  +  NG L+GY+++Y +  G +      ++        TSA L GL+ 
Sbjct: 763 SSEIEVSWNTIPWKSSNGRLLGYEVRYWNNGGEEESSSKVKVA----GNQTSAVLRGLKS 818

Query: 575 STKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNLVISWTAMPEIE 629
           +  Y   +  Y  AG G  S  +        P + P NV    +T   ++++W  +  +E
Sbjct: 819 NLAYYTAVRAYNTAGAGPFSATVNATTKKTPPSQPPGNVVWN-ATDTKVLLNWEQVKALE 877

Query: 630 HNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ--SELVLANQPTFQPYEIKVVQTWTEKDG 687
           + +    Y++F+R  +     N   VL+  +  +EL+L   P  + Y I+V  T    DG
Sbjct: 878 NESEVTGYKVFYRTSSQ----NNVQVLNTNKTSAELLL---PIKEDYIIEVKATTDGGDG 930

Query: 688 EGS 690
             S
Sbjct: 931 TSS 933



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 164/637 (25%), Positives = 242/637 (37%), Gaps = 99/637 (15%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE----------------- 131
           L I  VE SD G+YTC V++ V  A+       VL +P   V                  
Sbjct: 181 LYIAKVEPSDVGNYTCVVTSTVTNAR-------VLGSPTPLVLRSDGVMGEYEPKIELQF 233

Query: 132 PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKS 190
           PE + AA+  TV  EC A G P P+I+W   +G P    P   + +     + I N ++ 
Sbjct: 234 PETLPAAKGSTVKLECFALGNPVPQINWRRSDGMPF---PTKIKLRKFNGVLEIPNFQQE 290

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKP 248
           DTG+Y C A NS G   K+V    L +   P   +  KD  T    ++   CR  G PKP
Sbjct: 291 DTGSYECIAENSRG---KNVARGRLTYYAKPYWVQLLKDVETAVEDSLYWECRASGKPKP 347

Query: 249 EVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT 308
              W+ N   L       +E G L I ++  +DSG + C A NK G    S  L V    
Sbjct: 348 SYRWLKNGDALVLEERIQIENGALTIANLNVSDSGMFQCIAENKHGLIYSSAELKVLASA 407

Query: 309 -HITDQP--EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
              +  P  +  +V+ G      C   + P   LS  W +G   +    + R    ND  
Sbjct: 408 PDFSRNPMKKMIQVQVGSLVILDCKPSASPR-ALSF-WKKGDTVV--REQARISLLNDGG 463

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFT------------- 409
           L +   ++ D+G YTC A+ +         L V  P   + APSN               
Sbjct: 464 LKIMNVTKADAGIYTCIAENQFGKANGTTQLVVTEPTRIILAPSNMDVAVGESIILPCQV 523

Query: 410 ----LIQVI----------DAKKAVVSWNPVSPQS-----LRG----HFRGYKVQTWTEK 446
               L+ ++          D KK    +  V   S     +R     H   Y     T  
Sbjct: 524 QHDPLLDIMFAWYFNGTLTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGV 583

Query: 447 DGEGSIRELIVN-----KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TP 500
           D   S  ELIV       G++ T  V +  P  +   RV+A N    G PS     V T 
Sbjct: 584 DSVSSAAELIVRVPEAIDGKTRTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTE 643

Query: 501 EGVPGTVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLP 557
           E  P    S  +   GS S   + W  V  E  NG   GY + ++ +    V   ++ + 
Sbjct: 644 EAAPEVAPSEVSGGGGSRSELVITWDPVPEELQNGGGFGYVVAFRPL---GVTTWIQTVV 700

Query: 558 YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRG 612
              D      +   + P + Y + +  Y   G+G  S    +F     P   P ++    
Sbjct: 701 TSPDNPRYVFRNESIVPFSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSHISAHS 760

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRI-FWRRHNTGE 648
            + + + +SW  +P    N     Y + +W  +N GE
Sbjct: 761 LSSSEIEVSWNTIPWKSSNGRLLGYEVRYW--NNGGE 795



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 171/709 (24%), Positives = 262/709 (36%), Gaps = 96/709 (13%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFSDQGSY 102
           V   +KK+ L C   G P P   W  +G  I+ S D   + N G  ++I      D GSY
Sbjct: 39  VGSEDKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLNGGNLIVINPNRNWDTGSY 98

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLP----EPEI 157
            C  +N +G   S    L       F       ++  E + V   C   G P    E   
Sbjct: 99  QCFATNSLGTIVSREAKLQFAYLENFKSRMRSRVSVREGQGVVLLC---GPPPHSGELSY 155

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDVYVN 213
            WV N  P S    + RR V      + I  +  SD GNY C  T+++    V       
Sbjct: 156 AWVFNEYP-SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNARVLGSPTPL 214

Query: 214 VL-------AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           VL        + P+I  + P+      G TV L C   G P P++NW  +       +  
Sbjct: 215 VLRSDGVMGEYEPKIELQFPETLPAAKGSTVKLECFALGNPVPQINWRRSDGMPFPTKIK 274

Query: 266 ILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
           + +  G L+I +    D+G Y C A N  G     G LT     +     +D E     S
Sbjct: 275 LRKFNGVLEIPNFQQEDTGSYECIAENSRGKNVARGRLTYYAKPYWVQLLKDVETAVEDS 334

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             + C A   P  K S  WL+  + +  E     +Q  + +LT+   +  DSG + C A+
Sbjct: 335 LYWECRASGKP--KPSYRWLKNGDALVLEER---IQIENGALTIANLNVSDSGMFQCIAE 389

Query: 385 TELDFIEAQATLTVQVPLEAPSNFT------LIQVIDAKKAVVSWNP-VSPQSLRGHFRG 437
            +   I + A L V   L +  +F+      +IQV      ++   P  SP++L    +G
Sbjct: 390 NKHGLIYSSAELKV---LASAPDFSRNPMKKMIQVQVGSLVILDCKPSASPRALSFWKKG 446

Query: 438 YKV---QTWTEKDGEGSIRELIVNKGES---TTTEVDKFVPASKNFARVLAFNGAYNGPP 491
             V   Q       +G ++ + V K ++   T    ++F  A+     V+         P
Sbjct: 447 DTVVREQARISLLNDGGLKIMNVTKADAGIYTCIAENQFGKANGTTQLVVTEPTRIILAP 506

Query: 492 SEIISFVTPEGV-PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK---IKYQSVKGT 547
           S +   V    + P  VQ    + +  + ++         NG L  +K     ++ V G+
Sbjct: 507 SNMDVAVGESIILPCQVQHDPLLDIMFAWYF---------NGTLTDFKKDGSHFEKVGGS 557

Query: 548 KVGPLL------------------------------ERLPYISDPTTTSAKLAGLEPSTK 577
             G L+                               R+P   D  T +A +  L P  +
Sbjct: 558 SSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRVPEAIDGKTRTATVVELNPWVE 617

Query: 578 YRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHN 631
           Y   +    K G G  S      +     P   P  V G G + + LVI+W  +PE   N
Sbjct: 618 YEFRVVASNKIGGGEPSLPSEKVRTEEAAPEVAPSEVSGGGGSRSELVITWDPVPEELQN 677

Query: 632 APHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
              F Y + +R       W Q  V        V  N+    F PYE+KV
Sbjct: 678 GGGFGYVVAFRPLGV-TTWIQTVVTSPDNPRYVFRNESIVPFSPYEVKV 725



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 125/300 (41%), Gaps = 32/300 (10%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +E++ +T  C+A G P P   W  NG  I  +  +  +  G
Sbjct: 22  LLQGPVFVKEPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLNG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N I I   R  DTG+Y C ATNSLG +         A+        +   +V +G+ VV
Sbjct: 82  GNLIVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKSRMRSRVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        W+ N+     E    R+   ETG L I  V  +D G YTC 
Sbjct: 142 LLC----GPPPHSGELSYAWVFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCV 197

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
             + +  A+  GS   L ++    + +         PE      G +    C A+ +P  
Sbjct: 198 VTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIELQFPETLPAAKGSTVKLECFALGNPVP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +++  W R S+ + F ++ +  + N   L +    + D+G Y C A+       A+  LT
Sbjct: 258 QIN--WRR-SDGMPFPTKIKLRKFNGV-LEIPNFQQEDTGSYECIAENSRGKNVARGRLT 313



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 127/564 (22%), Positives = 211/564 (37%), Gaps = 71/564 (12%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
           V L C    +P   + W K    +    RIS  N G  L I +V  +D G YTC   N  
Sbjct: 427 VILDCKPSASPRALSFWKKGDTVVREQARISLLNDG-GLKIMNVTKADAGIYTCIAENQF 485

Query: 111 GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--WVHNGKPIS- 167
           G+A   +  L V       + P  ++ A  E++   C+    P  +I   W  NG     
Sbjct: 486 GKANG-TTQLVVTEPTRIILAPSNMDVAVGESIILPCQVQHDPLLDIMFAWYFNGTLTDF 544

Query: 168 QAPPNPRRKVGPNR---ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           +   +   KVG +    + I N++   +G Y C     +         +V + A  I   
Sbjct: 545 KKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVD--------SVSSAAELIVRV 596

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVN-WIHNQKELTGGRYTILETGDLKITDVAFADSG 283
           P+    +DGKT   T         E+N W+  +       + ++ +  +   + +     
Sbjct: 597 PE---AIDGKTRTATVV-------ELNPWVEYE-------FRVVASNKIGGGEPSLPSEK 639

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS----ATFRCNAVSDPSLKL 339
             T  A  ++  ++ SG    +    IT  P   E++ G        FR   V+      
Sbjct: 640 VRTEEAAPEVAPSEVSGGGGSRSELVITWDPVPEELQNGGGFGYVVAFRPLGVT------ 693

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
              W++    +     PR+V  N+ S+      E+  G Y  + +     +    +   +
Sbjct: 694 --TWIQTV--VTSPDNPRYVFRNE-SIVPFSPYEVKVGVYNNKGEGPFSPVTTVFSAEEE 748

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            P  APS+ +    + + +  VSWN +  +S  G   GY+V+ W     E S  ++ V  
Sbjct: 749 -PTVAPSHIS-AHSLSSSEIEVSWNTIPWKSSNGRLLGYEVRYWNNGGEEESSSKVKV-A 805

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT----PEGVPGTVQSLEAIPL 515
           G  T+  +         +  V A+N A  GP S  ++  T    P   PG V        
Sbjct: 806 GNQTSAVLRGLKSNLAYYTAVRAYNTAGAGPFSATVNATTKKTPPSQPPGNV----VWNA 861

Query: 516 GSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLE 573
             +   L W  VK  +    + GYK+ Y++     V  L        +   TSA+L  L 
Sbjct: 862 TDTKVLLNWEQVKALENESEVTGYKVFYRTSSQNNVQVL--------NTNKTSAELL-LP 912

Query: 574 PSTKYRIHLAGYTKAGDGAESKYL 597
               Y I +   T  GDG  S+ +
Sbjct: 913 IKEDYIIEVKATTDGGDGTSSEQI 936


>gi|256089530|ref|XP_002580854.1| neuroglian; septate junction protein [Schistosoma mansoni]
          Length = 279

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 106/278 (38%), Positives = 141/278 (50%), Gaps = 4/278 (1%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P F  +PE I      +VTF C ASG P P+I W  NG+  S      R+ +  N + + 
Sbjct: 2   PKFIEKPEDITVPVNGSVTFRCTASGDPPPKIRWTINGEDPSSYLDGVRKVLHGNTMQLS 61

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTCRVFG 244
           NL   D+    CNA+N  GY + + YVNV+  AP   + P+     VDG  V L C+ F 
Sbjct: 62  NLTIKDSAVIQCNASNKFGYAFTNAYVNVMREAPYFMKPPESVVRAVDGNQVTLFCQTFS 121

Query: 245 APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTV 304
           APK  ++W  +++ + GGRY IL +GDL I  VA  DSG Y C A N  G+ + SG L V
Sbjct: 122 APKAIISWTKDRRPINGGRYKILTSGDLFIESVAITDSGVYECTATNPFGSKKASGKLLV 181

Query: 305 KEHTHITDQPEDYEVEAGQSATFRCNAVSDPS--LKLSIVWLRGSEPIDFESEPRFVQS- 361
           +  T I   P +  V       F C A +DP+    L I W +    ID    PR  Q  
Sbjct: 182 RRKTRIVLAPINTRVYENDVVKFVCTAETDPAEVSNLKITWYKDDNYIDPNLTPRIQQVW 241

Query: 362 NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            DY+L ++ +   D+GQY C A   LDF  A A L VQ
Sbjct: 242 FDYALVLSGAQPRDTGQYRCNASNGLDFDTATAPLLVQ 279



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 106/269 (39%), Gaps = 16/269 (5%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           N  V   C   G P P+  W+ +G  P +  D + +  +G ++ + ++   D     C  
Sbjct: 16  NGSVTFRCTASGDPPPKIRWTINGEDPSSYLDGVRKVLHGNTMQLSNLTIKDSAVIQCNA 75

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           SN  G A + +    +  APYF   PE  + A +   VT  C+    P+  I W  + +P
Sbjct: 76  SNKFGYAFTNAYVNVMREAPYFMKPPESVVRAVDGNQVTLFCQTFSAPKAIISWTKDRRP 135

Query: 166 ISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           I+      R K+     + IE++  +D+G Y C ATN  G       + ++     I  A
Sbjct: 136 INGG----RYKILTSGDLFIESVAITDSGVYECTATNPFGSKKASGKL-LVRRKTRIVLA 190

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKP----EVNWIHNQK----ELTGGRYTILETGDLKITD 276
           P +    +   V   C     P      ++ W  +       LT     +     L ++ 
Sbjct: 191 PINTRVYENDVVKFVCTAETDPAEVSNLKITWYKDDNYIDPNLTPRIQQVWFDYALVLSG 250

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVK 305
               D+G+Y C A N L     +  L V+
Sbjct: 251 AQPRDTGQYRCNASNGLDFDTATAPLLVQ 279


>gi|348525482|ref|XP_003450251.1| PREDICTED: contactin-5-like [Oreochromis niloticus]
          Length = 1100

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 158/598 (26%), Positives = 253/598 (42%), Gaps = 47/598 (7%)

Query: 51  VELFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           V L C   G P+P   W K    +P     R SQ      L I +++  D G+Y C+  N
Sbjct: 320 VRLECFALGNPVPTITWRKINGNIPKKARLRKSQA----VLEIPNIQLEDSGTYECKAEN 375

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQ 168
             G + ++   L V   P +            E + +ECKA G P P   W+ NG P++ 
Sbjct: 376 PRG-STAFKGHLQVYTLPQWVRMINDTQMDSGEKLQWECKAIGRPRPTYRWLRNGLPLTS 434

Query: 169 APPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
                R ++    +TI  ++++D+G Y C A N    +Y +  + +LA AP     P   
Sbjct: 435 ---QGRLEIVNGELTIHKVQQADSGMYQCVAENKYAAIYSNAELQILASAPVFVPNPIRV 491

Query: 229 YTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSGEYTC 287
               GK V L C+   +PKP + W    + +    R  +L    LKI + + AD G Y C
Sbjct: 492 IATLGKDVSLDCKPKASPKPRITWKRGDRRIIPNKRIMLLRNNTLKIVNSSRADEGNYVC 551

Query: 288 FARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS 347
            A N+LG+A+ +  L VKE   +   P   EV  G+S    C A  D SL ++  W    
Sbjct: 552 RAENQLGSAEMTAILWVKEAMRVVLSPSRVEVTVGESVVLSCKATHDTSLDVAFQWFFNQ 611

Query: 348 EPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPL 402
           +PI+F+ +         QS+   L +       +G+Y CRAQT  D + A+A L V+ P 
Sbjct: 612 KPINFQYDGGHFEYIQTQSSTVDLMIRNILLKHAGKYGCRAQTSADTVFAEAELLVRGP- 670

Query: 403 EAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHFRGYKVQTWTEKDGEGSIREL 455
             P    +++ I    A +SW       +P+S  +++     + +   T K     +   
Sbjct: 671 PGPPGVVIVEEITDTTATLSWTRGVDNHSPISTYNIQAR-SPFSLGWQTVKTDPEPV--- 726

Query: 456 IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLEAIP 514
               G+  +    +  P  +   RV+A N    G PS     V T E VP    S  +  
Sbjct: 727 ---TGDMESAMAVELNPWVEYEFRVVATNAIGTGDPSAPSRGVRTKEAVPSVAPSNVSGG 783

Query: 515 LGSS-AFYLKW--VKPEQPNGVLMGYKIKYQS--VKGTKVGPLLERLPYISDPTTTSAKL 569
            G      + W  V  E  NG   GY + +++   +G K     E++   +D T    + 
Sbjct: 784 NGRRHELVISWEPVSEEFQNGEGFGYIVAFRANGTRGWK-----EKMVTSADSTMYKYRD 838

Query: 570 AGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEGRGSTPNNLVISW 622
               P T + + +  Y   GDG  SK +        P + P +V+  G + + + ++W
Sbjct: 839 ETFPPLTPFEVKVGVYNNKGDGPFSKVVIIHSAEGEPREAPSDVKAYGISSSEIRVTW 896



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 170/676 (25%), Positives = 250/676 (36%), Gaps = 97/676 (14%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS----IDLSVLAA-----PYFTVE-PEFINA 137
           +L I  V+ SD GSY C V N V  A+  S    + L          P   V  P  +  
Sbjct: 255 NLYISKVQPSDVGSYICLVKNTVTNARVLSPPTPLTLKTDGVMGEYEPKIEVHFPTSVLV 314

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   NG      P   R +     + I N++  D+G Y 
Sbjct: 315 AKGVTVRLECFALGNPVPTITWRKING----NIPKKARLRKSQAVLEIPNIQLEDSGTYE 370

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A N  G      ++ V    P+      D     G+ +   C+  G P+P   W+ N 
Sbjct: 371 CKAENPRGSTAFKGHLQVYT-LPQWVRMINDTQMDSGEKLQWECKAIGRPRPTYRWLRNG 429

Query: 257 KELTG-GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI-TDQP 314
             LT  GR  I+  G+L I  V  ADSG Y C A NK      +  L +     +    P
Sbjct: 430 LPLTSQGRLEIV-NGELTIHKVQQADSGMYQCVAENKYAAIYSNAELQILASAPVFVPNP 488

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
                  G+  +  C   + P  K  I W RG   I        +++N  +L +  SS  
Sbjct: 489 IRVIATLGKDVSLDCKPKASP--KPRITWKRGDRRIIPNKRIMLLRNN--TLKIVNSSRA 544

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVS------------ 422
           D G Y CRA+ +L   E  A L V+  +    + + ++V   +  V+S            
Sbjct: 545 DEGNYVCRAENQLGSAEMTAILWVKEAMRVVLSPSRVEVTVGESVVLSCKATHDTSLDVA 604

Query: 423 --W----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK----GESTTTEVDKFVP 472
             W     P++ Q   GHF   + Q+ T    +  IR +++      G    T  D    
Sbjct: 605 FQWFFNQKPINFQYDGGHFEYIQTQSSTV---DLMIRNILLKHAGKYGCRAQTSADTVFA 661

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
            ++   R         GPP          G PG V   E   +  +   L W +    + 
Sbjct: 662 EAELLVR---------GPP----------GPPGVVIVEE---ITDTTATLSWTRGVDNHS 699

Query: 533 VLMGYKIK--------YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAG 584
            +  Y I+        +Q+VK        +  P   D    SA    L P  +Y   +  
Sbjct: 700 PISTYNIQARSPFSLGWQTVK-------TDPEPVTGD--MESAMAVELNPWVEYEFRVVA 750

Query: 585 YTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
               G G  S      +    VP   P NV G     + LVISW  + E   N   F Y 
Sbjct: 751 TNAIGTGDPSAPSRGVRTKEAVPSVAPSNVSGGNGRRHELVISWEPVSEEFQNGEGFGYI 810

Query: 639 IFWRRHNTGEAWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
           + +R + T   W +  V     +     ++  P   P+E+KV     + DG  S + +I+
Sbjct: 811 VAFRANGT-RGWKEKMVTSADSTMYKYRDETFPPLTPFEVKVGVYNNKGDGPFS-KVVII 868

Query: 697 NKGESTTTEVDKFVPA 712
           +  E    E    V A
Sbjct: 869 HSAEGEPREAPSDVKA 884



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 159/649 (24%), Positives = 258/649 (39%), Gaps = 84/649 (12%)

Query: 49   KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
            +K++  C   G P P   W ++G+P+    R+   N    L I  V+ +D G Y C   N
Sbjct: 407  EKLQWECKAIGRPRPTYRWLRNGLPLTSQGRLEIVN--GELTIHKVQQADSGMYQCVAEN 464

Query: 109  GVGEAKSYSIDLSVLA-APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPIS 167
                  S + +L +LA AP F   P  + A   + V+ +CK    P+P I W    + I 
Sbjct: 465  KYAAIYS-NAELQILASAPVFVPNPIRVIATLGKDVSLDCKPKASPKPRITWKRGDRRII 523

Query: 168  QAPPNPR-RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
               PN R   +  N + I N  ++D GNY C A N LG       + V      +    +
Sbjct: 524  ---PNKRIMLLRNNTLKIVNSSRADEGNYVCRAENQLGSAEMTAILWVKEAMRVVLSPSR 580

Query: 227  DEYTVDGKTVVLTCRVFGAPKPEV--NWIHNQKELT----GGRYTILETG----DLKITD 276
             E TV G++VVL+C+       +V   W  NQK +     GG +  ++T     DL I +
Sbjct: 581  VEVTV-GESVVLSCKATHDTSLDVAFQWFFNQKPINFQYDGGHFEYIQTQSSTVDLMIRN 639

Query: 277  VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
            +    +G+Y C A+    T      L V+                G         ++D +
Sbjct: 640  ILLKHAGKYGCRAQTSADTVFAEAELLVRG-------------PPGPPGVVIVEEITDTT 686

Query: 337  LKLSIVWLRGSEPIDFESEPRFVQSNDYSL---TVTKSSELDSGQYTCRAQTELD-FIEA 392
              LS  W RG +     S       + +SL   TV    E  +G        EL+ ++E 
Sbjct: 687  ATLS--WTRGVDNHSPISTYNIQARSPFSLGWQTVKTDPEPVTGDMESAMAVELNPWVEY 744

Query: 393  QATLTV--------------------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            +  +                       VP  APSN +        + V+SW PVS +   
Sbjct: 745  EFRVVATNAIGTGDPSAPSRGVRTKEAVPSVAPSNVSGGNG-RRHELVISWEPVSEEFQN 803

Query: 433  GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEV--DKFVPASKNFARVLAFNGAYNGP 490
            G   GY V      +G    +E +V   +ST  +   + F P +    +V  +N   +GP
Sbjct: 804  GEGFGYIVAF--RANGTRGWKEKMVTSADSTMYKYRDETFPPLTPFEVKVGVYNNKGDGP 861

Query: 491  PSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY-QSVKGTK 548
             S+++   + EG P    S ++A  + SS   + W  P    G   GY++ Y + ++  +
Sbjct: 862  FSKVVIIHSAEGEPREAPSDVKAYGISSSEIRVTWKSPTPGPGKPRGYEVSYWKDMELEE 921

Query: 549  VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFK 603
             G   + +        TS  L GLE ++ Y I + G+   G G  S  +        P +
Sbjct: 922  SGKKQQTVK-----NETSMVLTGLEGNSVYAITVKGFNSIGQGPASTAVTAKTRKPPPAQ 976

Query: 604  NPDNV----EGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
             P N+    EG     NN+ +SW  +   ++ +    Y +  ++   G 
Sbjct: 977  PPANLHWLQEG-----NNVSLSWDPVKAKDNESDVIGYMVLLKQEGRGH 1020



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 94/394 (23%), Positives = 148/394 (37%), Gaps = 45/394 (11%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY------GKSLIIKHVEFSDQGSY 102
           KKV + C   G P P   W  +G  ++     S+ +Y      G  +I    E +D G Y
Sbjct: 119 KKVVMHCEARGNPPPTYSWYINGTQVD-----SEADYRYTFIDGNLIISNASEITDYGKY 173

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWV 160
            C+  N +G   S    L       F+ +    ++  E + V   C      PE    WV
Sbjct: 174 QCKAENSIGIVLSRDALLQFAYLGAFSTKARGGVSVREGQGVVLMCTPPPHSPEIIYSWV 233

Query: 161 HNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA-- 216
            N  P S    + RR +  +   + I  ++ SD G+Y C   N++          VL+  
Sbjct: 234 FNEFP-SFVAEDSRRFISQDTGNLYISKVQPSDVGSYICLVKNTV------TNARVLSPP 286

Query: 217 -------------HAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG 262
                        + P+I    P       G TV L C   G P P + W      +   
Sbjct: 287 TPLTLKTDGVMGEYEPKIEVHFPTSVLVAKGVTVRLECFALGNPVPTITWRKINGNIPKK 346

Query: 263 RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAG 322
                    L+I ++   DSG Y C A N  G+    G L V           D ++++G
Sbjct: 347 ARLRKSQAVLEIPNIQLEDSGTYECKAENPRGSTAFKGHLQVYTLPQWVRMINDTQMDSG 406

Query: 323 QSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCR 382
           +   + C A+  P  + +  WLR   P+  +     V      LT+ K  + DSG Y C 
Sbjct: 407 EKLQWECKAIGRP--RPTYRWLRNGLPLTSQGRLEIVNGE---LTIHKVQQADSGMYQCV 461

Query: 383 AQTELDFIEAQATLTV--QVPLEAPSNFTLIQVI 414
           A+ +   I + A L +    P+  P+   +I  +
Sbjct: 462 AENKYAAIYSNAELQILASAPVFVPNPIRVIATL 495



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 111/284 (39%), Gaps = 33/284 (11%)

Query: 125 APYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P F  EP+   F   ++E+ V   C+A G P P   W  NG  +          +  N 
Sbjct: 100 GPVFIQEPDDVIFPLDSDEKKVVMHCEARGNPPPTYSWYINGTQVDSEADYRYTFIDGNL 159

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVY-KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC 240
           I       +D G Y C A NS+G V  +D  +         T+A       +G+ VVL C
Sbjct: 160 IISNASEITDYGKYQCKAENSIGIVLSRDALLQFAYLGAFSTKARGGVSVREGQGVVLMC 219

Query: 241 RVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARN 291
                P P       +W+ N+          R+   +TG+L I+ V  +D G Y C  +N
Sbjct: 220 ----TPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQDTGNLYISKVQPSDVGSYICLVKN 275

Query: 292 KLGTAQ---GSGSLTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSLKLS 340
            +  A+       LT+K    + +         P    V  G +    C A+ +P    +
Sbjct: 276 TVTNARVLSPPTPLTLKTDGVMGEYEPKIEVHFPTSVLVAKGVTVRLECFALGNPV--PT 333

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           I W + +  I  ++  R  Q+    L +      DSG Y C+A+
Sbjct: 334 ITWRKINGNIPKKARLRKSQA---VLEIPNIQLEDSGTYECKAE 374



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 71/173 (41%), Gaps = 9/173 (5%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           +A   K V L C    +P P+  W +    I P+ RI       +L I +   +D+G+Y 
Sbjct: 492 IATLGKDVSLDCKPKASPKPRITWKRGDRRIIPNKRIMLLR-NNTLKIVNSSRADEGNYV 550

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI--HWVH 161
           C   N +G A+  +I L V  A    + P  +     E+V   CKA+     ++   W  
Sbjct: 551 CRAENQLGSAEMTAI-LWVKEAMRVVLSPSRVEVTVGESVVLSCKATHDTSLDVAFQWFF 609

Query: 162 NGKPISQAPPNP-----RRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           N KPI+           + +     + I N+     G YGC A  S   V+ +
Sbjct: 610 NQKPINFQYDGGHFEYIQTQSSTVDLMIRNILLKHAGKYGCRAQTSADTVFAE 662


>gi|449474236|ref|XP_002186936.2| PREDICTED: contactin-4 [Taeniopygia guttata]
          Length = 1028

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 171/628 (27%), Positives = 269/628 (42%), Gaps = 53/628 (8%)

Query: 51  VELFCIFGGTPLPQTIWSK-DG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           V+L C   G P+P   W + DG  +P       S G     L I + +  D G Y C   
Sbjct: 245 VKLECFALGNPVPTISWRRADGKQLPRKARRHRSSG----LLEIPNFQQEDAGLYECVAE 300

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPIS 167
           N  G+  +    L+  A P +T +   ++AA EE V++EC+ASG P+P   W+ +G+P+ 
Sbjct: 301 NVRGKNVARG-QLTFYAQPSWTQQISDVHAAIEERVSWECRASGRPKPSYRWLKDGEPLQ 359

Query: 168 QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKD 227
              P  R ++    +TI N+  SD G Y C A N  G ++    ++V+A  P+ ++    
Sbjct: 360 ---PQGRLQLEQGSLTIPNVSLSDAGMYQCVAENRHGVIFASAELSVIAIGPDFSKTLLK 416

Query: 228 EYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADSGE 284
           + T+   G  V++ C+   +P+P  +W   +  L    R T+L+ G L+I +V  +D+G 
Sbjct: 417 KLTLVKVGGEVIIECKPKASPRPTYSWKKGKDILRENERITVLDDGSLRIINVTKSDAGS 476

Query: 285 YTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWL 344
           YTC A N  GTA  +GSL VK+ T +   P   +V  G+S    C    D SL +   W 
Sbjct: 477 YTCVATNHFGTASSTGSLVVKDPTRVMVSPFSMDVTVGESIVLPCQVSHDHSLDIVFTWS 536

Query: 345 RGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
                IDFE +     R    +   L +       +G+Y C  QT +D + A A L V+ 
Sbjct: 537 FNGHLIDFEKDGDHFERVGGDSAGDLMIRSIQLKHAGKYVCMVQTSVDKLSAAADLIVRG 596

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSIRELI 456
           P   P   T+ +V ++  A +SW P +          Y VQ  T          ++ E+I
Sbjct: 597 PPGPPEAVTIEEVTES-TAQLSWRPGADN--HSPITMYVVQARTPFSVGWQAVSTVPEVI 653

Query: 457 VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTPEGVPGTV 507
              G + T  V    P  +   RV+A N    G PS         E +  VTP  V G  
Sbjct: 654 --DGRTFTATVVGLNPWVEYEFRVVAANLIGIGEPSSPSEKRRTEEALPEVTPANVSGGG 711

Query: 508 QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565
            S        S   + W  V  E  NG   GY + ++ +        ++ +    D    
Sbjct: 712 GS-------KSELVITWETVPEELQNGGGFGYVVAFRPLGTVS---WMQTVVASPDAARY 761

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNLVI 620
             +   L P + Y + +  Y   G+G+ S           P + P  V  R  + +++ +
Sbjct: 762 VFRNESLPPFSPYEVKVGVYNNKGEGSFSPVTVVYSAEEEPTRAPTTVLARSISASDVEV 821

Query: 621 SWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
           SW    E +H      Y +   RH+  E
Sbjct: 822 SWAPPWENQHKGRIQGYEVRCWRHDEKE 849



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 176/656 (26%), Positives = 257/656 (39%), Gaps = 88/656 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V  +K       ++           P   V+ PE + +
Sbjct: 180 NLYIAKVETSDVGNYTCVVTNTVTNSKVLGPPTPLVLRNDGVMGEYEPKIEVQFPETVPS 239

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   +GK   Q P   RR      + I N ++ D G Y 
Sbjct: 240 AKGTTVKLECFALGNPVPTISWRRADGK---QLPRKARRHRSSGLLEIPNFQQEDAGLYE 296

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A N  G       +   A  P  T+   D +    + V   CR  G PKP   W+ + 
Sbjct: 297 CVAENVRGKNVARGQLTFYAQ-PSWTQQISDVHAAIEERVSWECRASGRPKPSYRWLKDG 355

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           + L       LE G L I +V+ +D+G Y C A N+ G    S  L+V     I   P+ 
Sbjct: 356 EPLQPQGRLQLEQGSLTIPNVSLSDAGMYQCVAENRHGVIFASAELSV-----IAIGPDF 410

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
            +        V+ G      C   + P    S  W +G + I  E+E R    +D SL +
Sbjct: 411 SKTLLKKLTLVKVGGEVIIECKPKASPRPTYS--WKKGKD-ILRENE-RITVLDDGSLRI 466

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV------- 421
              ++ D+G YTC A        +  +L V+ P     +   + V   +  V+       
Sbjct: 467 INVTKSDAGSYTCVATNHFGTASSTGSLVVKDPTRVMVSPFSMDVTVGESIVLPCQVSHD 526

Query: 422 -SWNPVSPQSLRGHFRGY-KVQTWTEKDGEGSIRELIVNKGE---------STTTEVDKF 470
            S + V   S  GH   + K     E+ G  S  +L++   +            T VDK 
Sbjct: 527 HSLDIVFTWSFNGHLIDFEKDGDHFERVGGDSAGDLMIRSIQLKHAGKYVCMVQTSVDKL 586

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS--SAFYLKWVKPE 528
             A+    R         GPP      VT E V  +   L   P     S   +  V+  
Sbjct: 587 SAAADLIVR------GPPGPPEA----VTIEEVTESTAQLSWRPGADNHSPITMYVVQAR 636

Query: 529 QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
            P      + + +Q+V           +P + D  T +A + GL P  +Y   +      
Sbjct: 637 TP------FSVGWQAVS---------TVPEVIDGRTFTATVVGLNPWVEYEFRVVAANLI 681

Query: 589 GDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F Y + +R
Sbjct: 682 GIGEPSSPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGGGFGYVVAFR 741

Query: 643 RHNTGEAWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
              T  +W Q  V     +  V  N+  P F PYE+K V  +  K GEGS   + V
Sbjct: 742 PLGT-VSWMQTVVASPDAARYVFRNESLPPFSPYEVK-VGVYNNK-GEGSFSPVTV 794



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 143/369 (38%), Gaps = 28/369 (7%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KKV+L C   G P P   W  +G  I+             L+I +   S D G Y C  +
Sbjct: 44  KKVKLSCEVKGNPRPTIGWKLNGSSIDVGMDYRYSLLEGDLLINNPNKSQDAGMYQCVAT 103

Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVHN 162
           N  G   S    L       F T     ++  + + +   C   G P    E    W+ N
Sbjct: 104 NPFGTIVSREAQLQFAYLENFKTRTRSTVSVRQGQGMVLLC---GPPPHSGELTYAWIFN 160

Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN- 213
             P S    + RR V      + I  +  SD GNY C  TN+      LG     V  N 
Sbjct: 161 EYP-SFVHQDSRRFVSQETGNLYIAKVETSDVGNYTCVVTNTVTNSKVLGPPTPLVLRND 219

Query: 214 --VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILET 269
             +  + P+I  + P+   +  G TV L C   G P P ++W   + K+L         +
Sbjct: 220 GVMGEYEPKIEVQFPETVPSAKGTTVKLECFALGNPVPTISWRRADGKQLPRKARRHRSS 279

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I +    D+G Y C A N  G     G LT       T Q  D      +  ++ C
Sbjct: 280 GLLEIPNFQQEDAGLYECVAENVRGKNVARGQLTFYAQPSWTQQISDVHAAIEERVSWEC 339

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   P  K S  WL+  EP+  +   +  Q    SLT+   S  D+G Y C A+     
Sbjct: 340 RASGRP--KPSYRWLKDGEPLQPQGRLQLEQG---SLTIPNVSLSDAGMYQCVAENRHGV 394

Query: 390 IEAQATLTV 398
           I A A L+V
Sbjct: 395 IFASAELSV 403



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 113/293 (38%), Gaps = 38/293 (12%)

Query: 119 DLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D + L  P F  EP+   F   +EE+ V   C+  G P P I W  NG  I     + R 
Sbjct: 19  DDNTLHGPVFLQEPDSLIFPLGSEEKKVKLSCEVKGNPRPTIGWKLNGSSIDVGM-DYRY 77

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            +    + I N  KS D G Y C ATN  G +         A+        +   +V  G
Sbjct: 78  SLLEGDLLINNPNKSQDAGMYQCVATNPFGTIVSREAQLQFAYLENFKTRTRSTVSVRQG 137

Query: 234 KTVVLTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGE 284
           + +VL C     P P        WI N+          R+   ETG+L I  V  +D G 
Sbjct: 138 QGMVLLC----GPPPHSGELTYAWIFNEYPSFVHQDSRRFVSQETGNLYIAKVETSDVGN 193

Query: 285 YTCFARNKLGTAQGSGSLT--VKEHTHITDQ---------PEDYEVEAGQSATFRCNAVS 333
           YTC   N +  ++  G  T  V  +  +  +         PE      G +    C A+ 
Sbjct: 194 YTCVVTNTVTNSKVLGPPTPLVLRNDGVMGEYEPKIEVQFPETVPSAKGTTVKLECFALG 253

Query: 334 DPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS--LTVTKSSELDSGQYTCRAQ 384
           +P   +S  W R     D +  PR  + +  S  L +    + D+G Y C A+
Sbjct: 254 NPVPTIS--WRRA----DGKQLPRKARRHRSSGLLEIPNFQQEDAGLYECVAE 300



 Score = 45.8 bits (107), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 83/203 (40%), Gaps = 21/203 (10%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P  AP+   L + I A    VSW P      +G  +GY+V+ W   + E + +  I   G
Sbjct: 802 PTRAPTT-VLARSISASDVEVSWAPPWENQHKGRIQGYEVRCWRHDEKEENAKR-IRTVG 859

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT----PEGVPGTVQSLEAIPLG 516
             T+T+V      +     V A+N A  GP S  ++  T    P   PG +    +    
Sbjct: 860 NQTSTKVSNLRGNALYHLAVRAYNTAGTGPSSAAVNVTTKKPPPSQPPGNIVWNSS---- 915

Query: 517 SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
            S   L W  VK       + GYK+ Y+  +        E    + +   TS +L+ L  
Sbjct: 916 DSKIILNWDQVKALDNESEVRGYKVLYRWNR--------ESSTSVIETNKTSVELS-LPF 966

Query: 575 STKYRIHLAGYTKAGDGAESKYL 597
              Y I +  ++  GDG+ S+ +
Sbjct: 967 DEDYIIEIKPFSDGGDGSSSEQI 989


>gi|444729490|gb|ELW69903.1| Protein sidekick-1 [Tupaia chinensis]
          Length = 2058

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/358 (34%), Positives = 172/358 (48%), Gaps = 25/358 (6%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQTI--WSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
           + V   + ++ L CI    P+ +    W ++GV      RI+ G  ++G+ L I +   +
Sbjct: 68  RSVVAGSSEITLECIASARPVEELSINWKRNGV------RITSGLHSFGRRLTISNPTSA 121

Query: 98  DQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPE 154
           D G Y CE S      E       LS++ A     EPE  I    EETV   C+A G+P 
Sbjct: 122 DTGVYVCEASLRRSAFEPARAKAFLSIIXA-----EPENRILVEVEETVDIVCRAMGVPL 176

Query: 155 PEIHWVHNGKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P +HW  +   I++   NPR KV     + I+ L   D+G + C A+N  G +    Y++
Sbjct: 177 PTLHWYKDAVSINKLH-NPRYKVLSSGGLRIQKLCPEDSGIFQCFASNEGGEIQTHTYLD 235

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
           V   AP  T+ P D    DG T +L C V GAPKP + W      L  G     R+ +LE
Sbjct: 236 VTNIAPAFTQRPGDTTVTDGMTAILRCEVSGAPKPAITWKRGNHILASGSVQIPRFMLLE 295

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           +G L+I+ V   D+G YTCFA N  G+   S +LTV   T I   PED  V  G +A   
Sbjct: 296 SGGLQISPVFIQDAGNYTCFAANTEGSLNASATLTVWNRTSIVQPPEDRVVIKGTTAMLH 355

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           C A  DP + L  VW + +  I   S  R V   D SL ++++   D G YTC   +E
Sbjct: 356 CGATHDPRISLRYVWKKDNLVITPSSSSRIVVEKDGSLLISQTWSGDIGDYTCEIISE 413



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 129/294 (43%), Gaps = 26/294 (8%)

Query: 118 IDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLP--EPEIHWVHNGKPISQAPPNP 173
           ID     AP   V P    + A   E +T EC AS  P  E  I+W  NG  I+    + 
Sbjct: 51  IDTPETLAPVIVVPPGNRSVVAGSSE-ITLECIASARPVEELSINWKRNGVRITSGLHSF 109

Query: 174 RRKVGPNRITIENLRKSDTGNYGCNAT---NSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
            R     R+TI N   +DTG Y C A+   ++        +++++   PE     + E T
Sbjct: 110 GR-----RLTISNPTSADTGVYVCEASLRRSAFEPARAKAFLSIIXAEPENRILVEVEET 164

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITDVAFADSGEYTC 287
           VD     + CR  G P P ++W  +     +L   RY +L +G L+I  +   DSG + C
Sbjct: 165 VD-----IVCRAMGVPLPTLHWYKDAVSINKLHNPRYKVLSSGGLRIQKLCPEDSGIFQC 219

Query: 288 FARNKLGTAQGSGSLTVKEHT-HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           FA N+ G  Q    L V       T +P D  V  G +A  RC     P  K +I W RG
Sbjct: 220 FASNEGGEIQTHTYLDVTNIAPAFTQRPGDTTVTDGMTAILRCEVSGAP--KPAITWKRG 277

Query: 347 SEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           +  +   S   PRF+      L ++     D+G YTC A      + A ATLTV
Sbjct: 278 NHILASGSVQIPRFMLLESGGLQISPVFIQDAGNYTCFAANTEGSLNASATLTV 331



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 2/142 (1%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP N   +  + A +  V+W+P  P+S  G+ +GYK+  W E D +    ++ V   
Sbjct: 1545 PAMAPQNVQ-VTPLTASQLEVTWDPPPPESQNGNIQGYKIYYW-EADSQNETEKMKVLFL 1602

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
                 ++      +K    + AFN A +GP S+     T +  PG    L    + S+  
Sbjct: 1603 PEPMVKLKNLTSHTKYLVSISAFNAAGDGPKSDPRQGRTHQAAPGAPSFLMFSEITSTTL 1662

Query: 521  YLKWVKPEQPNGVLMGYKIKYQ 542
             + W +P   NG+L GY++ Y+
Sbjct: 1663 NVSWGEPVAANGILQGYRVVYE 1684



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 18/211 (8%)

Query: 397  TVQVPLE-APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIR 453
            T+Q P + AP++ T ++        + W P+      G+    GY+++ W   D + S  
Sbjct: 995  TLQAPPDVAPTSIT-VRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYW-RSDLQSSAL 1052

Query: 454  ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEA 512
              +VN        +++    ++   ++ AFN    GP SE++   T E VP    +++ A
Sbjct: 1053 TQVVNDRLEREFTIEELEEWTEYELQMQAFNTIGAGPWSEVVRGRTRESVPSAAPENVSA 1112

Query: 513  IPLGSSAFYLKWVK-PEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLP---YISDPTTTSA 567
              + S+   L W   PEQ  NG+++GYKI +++         L+  P    +    T SA
Sbjct: 1113 EAVSSTQILLTWASVPEQDQNGLILGYKILFRAKD-------LDSEPSSHVVRGNHTQSA 1165

Query: 568  KLAGLEPSTKYRIHLAGYTKAGDGAESKYLF 598
             LAGL     Y + +  +T+ G+G  S  L 
Sbjct: 1166 LLAGLRKFVLYELQVLAFTRIGNGVPSLPLI 1196



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 21/200 (10%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V  Q   G   GYK+  +  KD +      +V  
Sbjct: 1102 VPSAAPENVS-AEAVSSTQILLTWASVPEQDQNGLILGYKI-LFRAKDLDSEPSSHVVRG 1159

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGTVQSLEAIPLGSS 518
              + +  +           +VLAF    NG PS  +I   T +  PG    L    +  +
Sbjct: 1160 NHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSLPLILERTKDDAPGPPVRLVFPEVRLT 1219

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGT-------KVGPLLERLPYISDPTTTSAKLAG 571
            +  + W  PE+PNG+++GY+I Y+    +       +VG  + +         T+ +LA 
Sbjct: 1220 SVRIVWQPPEEPNGIILGYQIAYRLASSSPHMFTTVEVGATVRQF--------TATELA- 1270

Query: 572  LEPSTKYRIHLAGYTKAGDG 591
              P + Y   L+  T+ G G
Sbjct: 1271 --PESAYIFRLSAKTRQGWG 1288



 Score = 45.1 bits (105), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 92/246 (37%), Gaps = 47/246 (19%)

Query: 391  EAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV--------- 440
            E +A  T+Q VP E P + +      +   ++ W P   +SL G  +GY++         
Sbjct: 1394 ETEAVTTLQDVPGEPPGSVSATPHTTSS-VLIQWQPPRDESLNGLLQGYRIYYRELEYEA 1452

Query: 441  ----QTWTEKDGEGSIRELI-------VNKGESTTT--------------EVDKFVPASK 475
                +  T K       EL        VN   + TT              E  K     K
Sbjct: 1453 GSGTEAKTLKSPSALRAELTAQSSFKTVNSSSTLTTYELTRLDNSMSPWIEAKKPGQYLK 1512

Query: 476  NFARVLAFNGAYN----GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPE 528
             + R      AYN     P S  +     E  P    Q+++  PL +S   + W    PE
Sbjct: 1513 KYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPE 1572

Query: 529  QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
              NG + GYKI Y           ++ L ++ +P     KL  L   TKY + ++ +  A
Sbjct: 1573 SQNGNIQGYKIYYWEADSQNETEKMKVL-FLPEPM---VKLKNLTSHTKYLVSISAFNAA 1628

Query: 589  GDGAES 594
            GDG +S
Sbjct: 1629 GDGPKS 1634



 Score = 39.7 bits (91), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 101/259 (38%), Gaps = 48/259 (18%)

Query: 389 FIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
           F  A    T+Q VP   P N    + +++      WNP   Q + G  +GYK+  W    
Sbjct: 670 FSRAVTEYTLQGVPTAPPQNVQ-TEAVNSTTIQFLWNPPPQQFINGINQGYKLLAWPTHV 728

Query: 448 GEGSIRELI------VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
            E      I      V+ G    T + KF   +  F  VL F    +GPPS      TP+
Sbjct: 729 PEAVTVVTIAPDFHGVHHG--YITNLKKF---TAYFTSVLCFTTPGDGPPS------TPQ 777

Query: 502 GVPGTVQSLEAIPLGS-----SAFYL-------KWVKPEQPNG--VL-----MGYKIKYQ 542
            V     S  + P  S       F +       + V+PE P+   VL      GY+I ++
Sbjct: 778 LVWTHEDSEYSFPCVSLTTHQPCFLVRIPVDKERQVEPETPSSEEVLSCAQGAGYQISWE 837

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF 602
                  G    RL +  + TT   K+ GL   T Y I +A  T  G G  +     +  
Sbjct: 838 V-----YGKNDSRLTHTLNSTTHEYKIKGLSSLTTYTIDVAALTAVGAGLATSST--ISS 890

Query: 603 KNPDNVEGRGSTPNNLVIS 621
             P ++ G    P+NLVIS
Sbjct: 891 GVPPDLPG---APSNLVIS 906



 Score = 39.3 bits (90), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 75/194 (38%), Gaps = 13/194 (6%)

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGTV-QSLEAIPLGSS 518
           E T   V    PA     RV A N    G  S E    + PE  P    +++ A    + 
Sbjct: 537 EMTGVTVSDLTPARTYQFRVCAVNQVGRGQYSMETSRLMLPEEPPSAPPKNIVASGRTNQ 596

Query: 519 AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPST 576
           +  ++W  P +   NGVL GY ++   + G   G   +R   I+ P      +  L   T
Sbjct: 597 SIMVQWQPPPETEHNGVLRGYILRQYRLAGLP-GEYQQR--NITSPEVNYCLVTDLIIWT 653

Query: 577 KYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHN 631
           +Y I +A Y  AG G  S+      L  VP   P NV+        +   W   P+   N
Sbjct: 654 QYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNPPPQQFIN 713

Query: 632 APHFKYRIF-WRRH 644
             +  Y++  W  H
Sbjct: 714 GINQGYKLLAWPTH 727



 Score = 38.9 bits (89), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 12/179 (6%)

Query: 364 YSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSW 423
           Y   V   +++  GQY+         +E    +  + P  AP    +      +  +V W
Sbjct: 552 YQFRVCAVNQVGRGQYS---------METSRLMLPEEPPSAPPKNIVASGRTNQSIMVQW 602

Query: 424 NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAF 483
            P       G  RGY ++ +      G  ++  +   E     V   +  ++   +V A+
Sbjct: 603 QPPPETEHNGVLRGYILRQYRLAGLPGEYQQRNITSPEVNYCLVTDLIIWTQYEIQVAAY 662

Query: 484 NGAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKI 539
           NGA  G  S  ++  T +GVP    Q+++   + S+     W  P Q   NG+  GYK+
Sbjct: 663 NGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNPPPQQFINGINQGYKL 721


>gi|426244438|ref|XP_004016029.1| PREDICTED: contactin-5 [Ovis aries]
          Length = 1025

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 158/609 (25%), Positives = 261/609 (42%), Gaps = 45/609 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           A +   V++ C   G P+P   W K    I    R+ +      L I +V+  D G Y C
Sbjct: 238 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRKSQ--AVLEIPNVQLDDAGIYEC 295

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N  G+  ++   L V   P++  +           + +ECKA+G P P   W+ NG 
Sbjct: 296 RAENSRGK-NTFRGQLQVYTYPHWVEKLNDTQLDSGSHLRWECKATGKPRPTYRWLKNGV 354

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--EIT 222
           P+       R ++    + I N+ +SD G Y C A N  G +Y    + +LA AP   + 
Sbjct: 355 PLLL---QSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGTIYASAELKILASAPTFALN 411

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           +  K       + V++ C+  G+PKP ++W    K +    R  IL  G L+I + + +D
Sbjct: 412 QLRKTIIIPKDQEVIIECKPQGSPKPTISWKKGDKAVRENKRIAILPDGSLRILNASKSD 471

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+Y C   N  G+A+ + +++VKE T I   P+  E+  G+S    C A+ DPSL ++ 
Sbjct: 472 EGKYVCRGENVFGSAEITATVSVKEPTRIELTPKKTELTVGESIVLNCKAIHDPSLDVTF 531

Query: 342 VWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A L
Sbjct: 532 YWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAEL 591

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKDGE 449
            V+ P   P    +++ I    A +SW+P +          Y +Q        W      
Sbjct: 592 LVRGP-PGPPGIVIVEEITESTATLSWSPAADN--HSPISSYNLQARSPFSLGWQTVK-- 646

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQ 508
            ++ E I    ES    VD   P  +   RV+A N    G PS     + T E VP T  
Sbjct: 647 -TVPETITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAP 703

Query: 509 SLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISDPT 563
           +  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+ +
Sbjct: 704 TNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSEAS 758

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNL 618
               +   + P T + + +  Y   GDG  S+ +        P   P +V+    + + +
Sbjct: 759 KFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPTAAPTDVKATSVSVSEI 818

Query: 619 VISWTAMPE 627
           +++W  + E
Sbjct: 819 LVAWKHIKE 827



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 167/670 (24%), Positives = 251/670 (37%), Gaps = 91/670 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + A
Sbjct: 179 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 238

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I N++  D G Y 
Sbjct: 239 AKGTTVKMECFALGNPVPTITWMKVNG----YIPSKSRLRKSQAVLEIPNVQLDDAGIYE 294

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V  + P   E   D     G  +   C+  G P+P   W+ N 
Sbjct: 295 CRAENSRGKNTFRGQLQVYTY-PHWVEKLNDTQLDSGSHLRWECKATGKPRPTYRWLKNG 353

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTV--KEHTHITDQ- 313
             L       +  G L I +V  +D+G Y C A NK GT   S  L +     T   +Q 
Sbjct: 354 VPLLLQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGTIYASAELKILASAPTFALNQL 413

Query: 314 ------PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
                 P+D EV         C     P  K +I W +G + +      R     D SL 
Sbjct: 414 RKTIIIPKDQEV------IIECKPQGSP--KPTISWKKGDKAV--RENKRIAILPDGSLR 463

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI---QVIDAKKAV- 420
           +  +S+ D G+Y CR +      E  AT++V+ P      P    L     ++   KA+ 
Sbjct: 464 ILNASKSDEGKYVCRGENVFGSAEITATVSVKEPTRIELTPKKTELTVGESIVLNCKAIH 523

Query: 421 -----------VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDK 469
                      +   P+  +   GHF   + Q       +  IR +++         V  
Sbjct: 524 DPSLDVTFYWTLKGQPIDFEKEGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQT 580

Query: 470 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQ 529
              +  + A +L       GPP          G PG V   E   +  S   L W     
Sbjct: 581 TADSVSDEAELLV-----RGPP----------GPPGIVIVEE---ITESTATLSWSPAAD 622

Query: 530 PNGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
            +  +  Y ++ +S     +G   ++ +P        SA    L P  +Y   +      
Sbjct: 623 NHSPISSYNLQARS--PFSLGWQTVKTVPETITGDMESAMAVDLNPWVEYEFRVVATNPI 680

Query: 589 GDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G G  S      +    VP   P NV GR    + LVI+W  + E   N   F Y + +R
Sbjct: 681 GTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFR 740

Query: 643 RHNTGEAWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV---N 697
            + T   W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V    
Sbjct: 741 PNGT-RGWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVVICSA 797

Query: 698 KGESTTTEVD 707
           +GE T    D
Sbjct: 798 EGEPTAAPTD 807



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 95/386 (24%), Positives = 145/386 (37%), Gaps = 36/386 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           KKV L C   G P+P   W ++G  I+  SD       G  +I    E  D G Y C  +
Sbjct: 43  KKVALNCEARGNPVPNYRWLRNGTEIDLESDYRYSLIDGAFIISNPSEAKDSGHYQCLAA 102

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N  G   S  + L       F+      ++  E + V   C      PE    WV N  P
Sbjct: 103 NTFGTILSREVILQFAYLGNFSGRTRSAVSVREGQGVVLLCSPPPHSPEIIYSWVFNEFP 162

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
            S    + RR +      + I  ++ SD G+Y C   N++                  V 
Sbjct: 163 -SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVM 221

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            +    +  H P    A K      G TV + C   G P P + W+     +        
Sbjct: 222 GEYEPKIEVHFPFTVTAAK------GTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRK 275

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               L+I +V   D+G Y C A N  G     G L V  + H  ++  D ++++G    +
Sbjct: 276 SQAVLEIPNVQLDDAGIYECRAENSRGKNTFRGQLQVYTYPHWVEKLNDTQLDSGSHLRW 335

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  + +  WL+   P+  +S    V      L +   ++ D+G Y C A+ + 
Sbjct: 336 ECKATGKP--RPTYRWLKNGVPLLLQSRVEMVNG---VLMIHNVNQSDAGMYQCLAENKY 390

Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQV 413
             I A A L +   L +   F L Q+
Sbjct: 391 GTIYASAELKI---LASAPTFALNQL 413



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 121/289 (41%), Gaps = 35/289 (12%)

Query: 121 SVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
           SV   P F  EPE   F   ++E+ V   C+A G P P   W+ NG  I     + R  +
Sbjct: 20  SVDYGPVFVQEPEDIIFPTDSDEKKVALNCEARGNPVPNYRWLRNGTEI-DLESDYRYSL 78

Query: 178 GPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKT 235
                 I N  ++ D+G+Y C A N+ G +     +   A+    +   +   +V +G+ 
Sbjct: 79  IDGAFIISNPSEAKDSGHYQCLAANTFGTILSREVILQFAYLGNFSGRTRSAVSVREGQG 138

Query: 236 VVLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYT 286
           VVL C    +P P       +W+ N+          R+   ETG+L I+ V  +D G Y 
Sbjct: 139 VVLLC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYI 194

Query: 287 CFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATFRCNAVSDP 335
           C  +N +  A+       LT++    + +     EV          G +    C A+ +P
Sbjct: 195 CLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNP 254

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
               +I W++ +  I  +S  R  Q+    L +      D+G Y CRA+
Sbjct: 255 V--PTITWMKVNGYIPSKSRLRKSQA---VLEIPNVQLDDAGIYECRAE 298



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           RK  +  ++++V + C   G+P P   W K    +  + RI+    G SL I +   SD+
Sbjct: 414 RKTIIIPKDQEVIIECKPQGSPKPTISWKKGDKAVRENKRIAILPDG-SLRILNASKSDE 472

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI-- 157
           G Y C   N  G A+  +  +SV       + P+       E++   CKA   P  ++  
Sbjct: 473 GKYVCRGENVFGSAE-ITATVSVKEPTRIELTPKKTELTVGESIVLNCKAIHDPSLDVTF 531

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          + R +     + I N+     G YGC
Sbjct: 532 YWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILLMHAGRYGC 576


>gi|226133|prf||1411301A neural adhesion mol L1
          Length = 1260

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 145/476 (30%), Positives = 211/476 (44%), Gaps = 29/476 (6%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W     P+ P+DR+   N+ K+L + +V   D G YT
Sbjct: 252 VALQGQSLILECIAEGFPTPTIKWLHPSDPM-PTDRVIYQNHNKTLQLLNVGEEDDGEYT 310

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PEI W  NG
Sbjct: 311 CLAENSLGSAR-HAYYVTVEAAPYWLQKPQSHLYGPGETARLDCQVQGRPQPEITWRING 369

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +     + + ++    + + N++ SDT    C A N  G +  + Y+ V+     I  
Sbjct: 370 MSMETVNKDQKYRIEQGSLILSNVQPSDTMVTQCEARNQHGLLLANAYIYVVQLPARILT 429

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
                Y  V+G T  L C+ FGAP P V W+  +    L   R+     G L I D+   
Sbjct: 430 KDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGTLSIRDLQAN 489

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VKE T IT  P     + G   TF C A  DPSL+ S
Sbjct: 490 DTGRYFCQAANDQNNVTILANLQVKEATQITQGPRSAIEKKGARVTFTCQASFDPSLQAS 549

Query: 341 IVWL--------RGSEPIDFESEPRFV-QSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           I W         RG     F  + + V QS DYS         D G Y+C A TELD +E
Sbjct: 550 ITWRGDGRDLQERGDSDKYFIEDGKLVIQSLDYS---------DQGNYSCVASTELDEVE 600

Query: 392 AQAT-LTVQVPLEAPS-NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE 449
           ++A  L V  P   P    +   ++   +  +SW+P   +        Y ++   ++   
Sbjct: 601 SRAQLLVVGSPGPVPHLELSDRHLLKQSQVHLSWSPA--EDHNSPIEKYDIEFEDKEMAP 658

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVP 504
                L    G  T+T + K  P      RV A N    G PS +  + VTPE  P
Sbjct: 659 EKWFSLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 713



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 159/585 (27%), Positives = 247/585 (42%), Gaps = 93/585 (15%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--NLRKSDTGN 194
           A + +++  EC A G P P I W+H   P+    P  R     +  T++  N+ + D G 
Sbjct: 253 ALQGQSLILECIAEGFPTPTIKWLHPSDPM----PTDRVIYQNHNKTLQLLNVGEEDDGE 308

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           Y C A NSLG      YV V A AP   + P+      G+T  L C+V G P+PE+ W  
Sbjct: 309 YTCLAENSLGSARHAYYVTVEA-APYWLQKPQSHLYGPGETARLDCQVQGRPQPEITWRI 367

Query: 255 NQKEL----TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH- 309
           N   +       +Y I E G L +++V  +D+    C ARN+ G    +  + V +    
Sbjct: 368 NGMSMETVNKDQKYRI-EQGSLILSNVQPSDTMVTQCEARNQHGLLLANAYIYVVQLPAR 426

Query: 310 -ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
            +T   + Y    G +A   C A   P    S+ WL        + E RF    + +L++
Sbjct: 427 ILTKDNQTYMAVEGSTAYLLCKAFGAPVP--SVQWLDEEGTTVLQDE-RFFPYANGTLSI 483

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE-------------APSNFTLIQVID 415
                 D+G+Y C+A  + + +   A L V+   +             A   FT     D
Sbjct: 484 RDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITQGPRSAIEKKGARVTFTCQASFD 543

Query: 416 -AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSIRELIV----NKGESTTTE 466
            + +A ++W        RG  R  + +  ++K    DG+  I+ L      N     +TE
Sbjct: 544 PSLQASITW--------RGDGRDLQERGDSDKYFIEDGKLVIQSLDYSDQGNYSCVASTE 595

Query: 467 VDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP---LGSSAFYLK 523
           +D+     ++ A++L                    G PG V  LE      L  S  +L 
Sbjct: 596 LDEV----ESRAQLLVV------------------GSPGPVPHLELSDRHLLKQSQVHLS 633

Query: 524 WVKPEQPNGVLMGYKIKYQSVKGTKVGP----LLERLPYISDPTTTSAKLAGLEPSTKYR 579
           W   E  N  +  Y I+++     ++ P     L ++P   + T+T+ KL+   P   Y 
Sbjct: 634 WSPAEDHNSPIEKYDIEFED---KEMAPEKWFSLGKVP--GNQTSTTLKLS---PYVHYT 685

Query: 580 IHLAGYTKAGDGAESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAP 633
             +    K G G  S     V      P KNP +V G G+  NN+VI+W  +  ++ NAP
Sbjct: 686 FRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAP 745

Query: 634 HFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
             +YR+ WR     E W +  V D     LV++N  TF PYEIKV
Sbjct: 746 QIQYRVQWRPQGKQETWRKQTVSD---PFLVVSNTSTFVPYEIKV 787



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 85/189 (44%), Gaps = 9/189 (4%)

Query: 411  IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW----TEKDGEGSI-RELIVNKGESTTT 465
            I + ++   +V W PV    ++GH +GY V  W      K  +  I +  IV    +T+ 
Sbjct: 820  ITIFNSSTVLVRWRPVDLAQVKGHLKGYNVTYWWKGSQRKHSKRHIHKSHIVVPANTTSA 879

Query: 466  EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWV 525
             +    P S     V AFNG   GP SE  +F TPEGVPG  ++L       ++  L W 
Sbjct: 880  ILSGLRPYSSYHVEVQAFNGRGLGPASEW-TFSTPEGVPGHPEALHLECQSDTSLLLHWQ 938

Query: 526  KPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
             P   NGVL GY + Y  V+G     L   L   SDP   +  L  L P  +YR  L   
Sbjct: 939  PPLSHNGVLTGYLLSYHPVEGESKEQLFFNL---SDPELRTHNLTNLNPDLQYRFQLQAT 995

Query: 586  TKAGDGAES 594
            T+ G   E+
Sbjct: 996  TQQGGPGEA 1004



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 92/387 (23%), Positives = 164/387 (42%), Gaps = 31/387 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLIIK-HVE 95
           ++ V      + L C   G P  +  W+KDG+   P +     + +  Y  S  I+ +  
Sbjct: 43  RRLVVFPTDDISLKCEARGRPQVEFRWTKDGIHFKPKEELGVVVHEAPYSGSFTIEGNNS 102

Query: 96  FSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKAS 150
           F+   QG Y C  SN +G A S+ I L    AP +   TV+P  +   E   +      S
Sbjct: 103 FAQRFQGIYRCYASNKLGTAMSHEIQLVAEGAPKWPKETVKPVEVEEGESVVLPCNPPPS 162

Query: 151 GLPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLGYV 206
             P   I+W+++   I     + R  +G N  +   N+  SD   +Y CNA    +   +
Sbjct: 163 AAPL-RIYWMNSK--IFDIKQDERVSMGQNGDLYFANVLTSDNHSDYICNAHFPGTRTII 219

Query: 207 YK---DVYV----NVLAHAPEI---TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
            K   D+ V    +++   P +   T +      + G++++L C   G P P + W+H  
Sbjct: 220 QKEPIDLRVKPTNSMIDRKPRLLFPTNSSSRLVALQGQSLILECIAEGFPTPTIKWLHPS 279

Query: 257 KELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE 315
             +   R         L++ +V   D GEYTC A N LG+A+ +  +TV+   +   +P+
Sbjct: 280 DPMPTDRVIYQNHNKTLQLLNVGEEDDGEYTCLAENSLGSARHAYYVTVEAAPYWLQKPQ 339

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
            +    G++A   C     P  +  I W      ++  ++ +  +    SL ++     D
Sbjct: 340 SHLYGPGETARLDCQVQGRP--QPEITWRINGMSMETVNKDQKYRIEQGSLILSNVQPSD 397

Query: 376 SGQYTCRAQTELDFIEAQATL-TVQVP 401
           +    C A+ +   + A A +  VQ+P
Sbjct: 398 TMVTQCEARNQHGLLLANAYIYVVQLP 424


>gi|47229254|emb|CAG04006.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1238

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 170/359 (47%), Gaps = 8/359 (2%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           CI  G P P   W KDG  +     +   N+ K + I    F D G Y C  +N +   +
Sbjct: 269 CIAAGVPTPHITWRKDGEDLVVRSPVKAKNFNKMIQIPRASFEDAGEYVCTATNKLDYIQ 328

Query: 115 SYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPR 174
            ++I + V AAP++  +P  +  A EE     C++ G P P + W  NG+PI  +   P 
Sbjct: 329 -HTITVQVKAAPFWLEKPADLVLAPEEDGRLVCRSDGAPRPTVTWFINGEPIDPSTLQPN 387

Query: 175 RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY--TVD 232
            +V    + +  +   +   Y CNA+N  GY+  + +VNVL   P I  + ++EY   ++
Sbjct: 388 VEVSGETVVLRTVTTLNNAVYQCNASNPYGYLLANAFVNVLHATPRILGS-RNEYLKVIE 446

Query: 233 GKTVVLTCRVFGAPKPEVNWI-HNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARN 291
           G    L CR FG+P PE+ W  + Q  L G R+     G L+I ++   D G Y C   N
Sbjct: 447 GSRAFLDCRYFGSPVPELRWSKYGQGSLEGNRFRTHSNGTLEIKNIQVVDQGAYLCVVSN 506

Query: 292 KLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID 351
             G  +    + VKE T I  +P D +V  G    F C   +D +  ++  W++G++P+ 
Sbjct: 507 VAGRDENQVRIEVKEPTLIVTRPTDMKVIRGADVRFECAVKTDATTPVTTTWMKGTKPVT 566

Query: 352 FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTL 410
                   +SN   L ++  +  D G YTC  ++EL+   A A L V    + P++  L
Sbjct: 567 LGWRISMDESN---LVISNINTADGGNYTCLVKSELEQKSASARLMVMDRPDPPTDLEL 622



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 91/232 (39%), Gaps = 46/232 (19%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR------- 453
            PL AP N   +  I++ +  V W+PVS  S+ G  + YKV  W +      +R       
Sbjct: 843  PLTAPLNLR-VSDIESNQVTVHWDPVSHDSIMGELKEYKVYYWRDSSQLRWLRVNRALKS 901

Query: 454  ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG----------- 502
            +   N+    +  V    P S     ++  N  + GP S  I F TPEG           
Sbjct: 902  QAFANRNGEPSGVVTGLHPYSNYKMYIVVVNNRFEGPSSNNIHFSTPEGGKNPLSESRCI 961

Query: 503  ----------------------VPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
                                  VP   +S         + Y+ W  P +PNGV+ GY +K
Sbjct: 962  WSHELTFPNLTCAVCSHPSLLQVPSVPRSFRIQQRHLDSIYVDWDVPAEPNGVITGYSLK 1021

Query: 541  YQSVKGTKVGPL-LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            YQ+V  T+   L +E  P    P  TS  +   +  T+YR  +A  T+ G G
Sbjct: 1022 YQTVNATRGEELRVEDFP----PNVTSFSIRRFDRYTRYRFSVAARTETGIG 1069



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)

Query: 605 PDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELV 664
           P N++G G+  NN+ ISW  +   + N PH KY ++W+R ++ E W        R S+  
Sbjct: 742 PKNLKGVGTWRNNMEISWEPLAYKDWNGPHLKYLVWWKRKDSREEWKNATT---RWSKYY 798

Query: 665 LANQPTFQPYEIKV 678
           +    TF PY++KV
Sbjct: 799 IYGADTFTPYDLKV 812



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 88/373 (23%), Positives = 137/373 (36%), Gaps = 85/373 (22%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGK--PISQAP-PNPRRKVGPNRITIENLRKSDTGNYG 196
           ++ +  EC+A G P P   W  NG+   +++ P  + RR  G   I   N  +     Y 
Sbjct: 18  KDAMVIECEAKGNPHPIFSWRRNGRYYNVARDPQASMRRHSGTLDIYARNNPEQYEAEYQ 77

Query: 197 CNATNSLGYVYKDVYVNVLAHAP----EITE--------------------APKDEYTVD 232
           C A+N  G  Y +     L  AP    EI E                       + Y + 
Sbjct: 78  CVASNMYGSAYSNKIRLRLYRAPVWPREIIEPVVISAGLPLVLSCDPPPGPPKPETYWMS 137

Query: 233 GKTVVL---------------TCRVFGAPKPEVNW-IHN-----QKELTGGRYTILETGD 271
               VL               +C   G+     NW I       Q      R ++   GD
Sbjct: 138 SCECVLNRDRARGRQQQTQTHSCVAAGSFARPFNWPIQTAVPTMQPVRQDRRVSMGVNGD 197

Query: 272 LKITDVAFADS-GEYTCFARNKL-GTAQGSGSLTVKEHT--HITDQPEDYEVEAGQSAT- 326
           L  ++V F DS  +Y C AR       Q    + VK  T   + +    +    G S++ 
Sbjct: 198 LYFSNVHFNDSVADYCCNARLPYRNVIQQKRPVVVKVLTTRSVVESAPTWLSPKGSSSST 257

Query: 327 ---------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSG 377
                      C A   P+    I W +  E +   S P   ++ +  + + ++S  D+G
Sbjct: 258 LVLLGEELLLECIAAGVPTPH--ITWRKDGEDLVVRS-PVKAKNFNKMIQIPRASFEDAG 314

Query: 378 QYTCRAQTELDFIEAQATLTVQVP-----LEAPSNFTLIQVID---------AKKAVVSW 423
           +Y C A  +LD+I  Q T+TVQV      LE P++  L    D         A +  V+W
Sbjct: 315 EYVCTATNKLDYI--QHTITVQVKAAPFWLEKPADLVLAPEEDGRLVCRSDGAPRPTVTW 372

Query: 424 ----NPVSPQSLR 432
                P+ P +L+
Sbjct: 373 FINGEPIDPSTLQ 385


>gi|426370197|ref|XP_004052056.1| PREDICTED: contactin-5-like, partial [Gorilla gorilla gorilla]
          Length = 783

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 183/393 (46%), Gaps = 19/393 (4%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           A +   V++ C   G P+P   W K    +P     R SQ      L I +V+  D G Y
Sbjct: 306 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQA----VLEIPNVQLDDAGIY 361

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C   N  G+  S+   L V   P++  +           + +ECKA+G P P   W+ N
Sbjct: 362 ECRAENSRGK-NSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKN 420

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--E 220
           G P+S   P  R ++    + I N+ +SD G Y C A N  G +Y    + +LA AP   
Sbjct: 421 GVPLS---PQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFA 477

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
           + +  K       + VV+ C+  G+PKP ++W    + +    R  IL  G L+I + + 
Sbjct: 478 LNQLKKTIIVTKDREVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASK 537

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           +D G+Y C   N  G+A+   SL+VKE T I   P+  E+  G+S    C A+ D SL +
Sbjct: 538 SDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 597

Query: 340 SIVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +  W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A
Sbjct: 598 TFYWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEA 657

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVS 427
            L V+ P   P    +++ I    A +SW+P +
Sbjct: 658 ELLVRGP-PGPPGIVIVEEITESTATLSWSPAA 689



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 149/394 (37%), Gaps = 39/394 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           KKV L C   G P+P   W ++G  I+  SD       G  +I    E  D G Y C  +
Sbjct: 111 KKVALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLAT 170

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N +G   S    L       F+      ++  E + V   C      PE    WV N  P
Sbjct: 171 NTLGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 230

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
            S    + RR +      + I  ++ SD G+Y C   N++                  V 
Sbjct: 231 -SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVM 289

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            +    +  H P    A K      G TV + C   G P P + W+     +        
Sbjct: 290 GEYEPKIEVHFPFTVTAAK------GTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK 343

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               L+I +V   D+G Y C A N  G     G L V  + H  ++  D ++++G    +
Sbjct: 344 SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRW 403

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  + +  WL+   P+  +S    V      L +   ++ D+G Y C A+ + 
Sbjct: 404 ECKATGKP--RPTYRWLKNGVPLSPQSRVEMVNG---VLMIHNVNQSDAGMYQCLAENKY 458

Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
             I A A L +   L +   F L Q+   KK ++
Sbjct: 459 GAIYASAELKI---LASAPTFALNQL---KKTII 486



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 124/297 (41%), Gaps = 35/297 (11%)

Query: 113 AKSYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
           + ++  D  V   P F  EP+   F   ++E+ V   C+  G P P   W+ NG  I   
Sbjct: 80  SDAFKQDEGVDYGPVFVQEPDDIIFPTDSDEKKVALNCEVRGNPVPSYRWLRNGTEI-DL 138

Query: 170 PPNPRRKVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
             + R  +      I N  ++ D+G+Y C ATN+LG +         A+    +   +  
Sbjct: 139 ESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNTLGSILSREATLQFAYLGNFSGRTRSA 198

Query: 229 YTV-DGKTVVLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVA 278
            +V +G+ VVL C    +P P       +W+ N+          R+   ETG+L I+ V 
Sbjct: 199 VSVREGQGVVLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQ 254

Query: 279 FADSGEYTCFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATF 327
            +D G Y C  +N +  A+       LT++    + +     EV          G +   
Sbjct: 255 TSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKM 314

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
            C A+ +P    +I W++ +  I  ++  R  Q+    L +      D+G Y CRA+
Sbjct: 315 ECFALGNPV--PTITWMKVNGYIPSKARLRKSQA---VLEIPNVQLDDAGIYECRAE 366



 Score = 47.0 bits (110), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  ++++V + C   G+P P   W K    +  + RI+    G SL I +   SD+
Sbjct: 482 KKTIIVTKDREVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDG-SLRILNASKSDE 540

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEI 157
           G Y C   N  G A+  +  LSV       + P+       E++   CKA      +   
Sbjct: 541 GKYVCRGENVFGSAEIIA-SLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 599

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          + R +     + I N+     G YGC
Sbjct: 600 YWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGC 644


>gi|74184167|dbj|BAE37085.1| unnamed protein product [Mus musculus]
          Length = 893

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 160/609 (26%), Positives = 256/609 (42%), Gaps = 45/609 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           A +   V++ C   G P+P   W K    I    R+ +      L I +++  D G Y C
Sbjct: 106 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRKSQ--AVLEIPNLQLDDAGIYGC 163

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N  G+  S+   L +   P++  +           + +ECKA+G P P   W+ NG 
Sbjct: 164 TAENSRGK-NSFRGQLQIFTYPHWVQKLNDTQLDSGSPLQWECKATGKPRPTYRWLKNGA 222

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--EIT 222
           P+    P  R       + I+++ +SD G Y C A N  G +Y    + +LA  P  E+ 
Sbjct: 223 PLL---PQSRVDTVNGILAIQSVNQSDAGMYQCLAENKYGAIYASAELKILASPPSFELN 279

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFAD 281
           +  K       + V++ C   G+PKP ++W    K +    R  IL  G L+I + + AD
Sbjct: 280 QVKKSIIVTKDRGVLIECEPQGSPKPAISWRKGDKAVRANKRIAILPDGSLRILNASKAD 339

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+Y C   N  G+A+   SL+VKE T I   P+  E+  G+S    C A+ D SL ++ 
Sbjct: 340 EGKYICQGVNIFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 399

Query: 342 VWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A L
Sbjct: 400 YWTLKGQPIDFEKEGGHFENIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAEL 459

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKDGE 449
            V+ P   P    +++ I    A +SW+P +          Y +Q        W      
Sbjct: 460 LVRGP-PGPPGVVIVEEITESTATLSWSPATDN--HSPISSYNLQARSPFSLGWQTVK-- 514

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQ 508
            ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T  
Sbjct: 515 -TVPEVITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSIPSRMIRTNEAVPKTAP 571

Query: 509 SLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISDPT 563
           S  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+ +
Sbjct: 572 SNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSEAS 626

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNL 618
               +   + P T + + +  Y   GDG  S+ +        P   P +V     + + +
Sbjct: 627 KFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPTAAPTDVTATSVSVSEI 686

Query: 619 VISWTAMPE 627
            + W  + E
Sbjct: 687 FVVWKHVKE 695



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 165/677 (24%), Positives = 245/677 (36%), Gaps = 105/677 (15%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + A
Sbjct: 47  NLYISKVQTSDVGSYICLVKNAVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 106

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I NL+  D G YG
Sbjct: 107 AKGTTVKMECFALGNPVPTITWMKVNG----YIPSKSRLRKSQAVLEIPNLQLDDAGIYG 162

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + +  + P   +   D     G  +   C+  G P+P   W+ N 
Sbjct: 163 CTAENSRGKNSFRGQLQIFTY-PHWVQKLNDTQLDSGSPLQWECKATGKPRPTYRWLKNG 221

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
             L          G L I  V  +D+G Y C A NK G    S  L       I   P  
Sbjct: 222 APLLPQSRVDTVNGILAIQSVNQSDAGMYQCLAENKYGAIYASAEL------KILASPPS 275

Query: 317 YE---------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
           +E         V   +     C     P  K +I W +G + +   +  R     D SL 
Sbjct: 276 FELNQVKKSIIVTKDRGVLIECEPQGSP--KPAISWRKGDKAV--RANKRIAILPDGSLR 331

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI----------QVI 414
           +  +S+ D G+Y C+        E  A+L+V+ P      P    L            + 
Sbjct: 332 ILNASKADEGKYICQGVNIFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIH 391

Query: 415 DAKKAVVSW-----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDK 469
           DA   V  +      P+  +   GHF   + Q       +  IR +++         V  
Sbjct: 392 DASLDVTFYWTLKGQPIDFEKEGGHFENIRAQA---SSADLMIRNILLMHAGRYGCRVQT 448

Query: 470 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQ 529
              +  + A +L       GPP          G PG V   E   +  S   L W     
Sbjct: 449 TADSVSDEAELLV-----RGPP----------GPPGVVIVEE---ITESTATLSWSPATD 490

Query: 530 PNGVLMGYKIK--------YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIH 581
            +  +  Y ++        +Q+VK          +P +      SA    L P  +Y   
Sbjct: 491 NHSPISSYNLQARSPFSLGWQTVK---------TVPEVITGDMESAMAVDLNPWVEYEFR 541

Query: 582 LAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHF 635
           +      G G  S      +    VP   P NV GR    + LVI+W  + E   N   F
Sbjct: 542 VVATNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSGRSGRRHELVIAWEPVSEEFQNGEGF 601

Query: 636 KYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRE 693
            Y + +R + T   W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +
Sbjct: 602 GYIVAFRPNGT-RGWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQ 658

Query: 694 LIV---NKGESTTTEVD 707
           ++V    +GE T    D
Sbjct: 659 IVVICSAEGEPTAAPTD 675



 Score = 47.0 bits (110), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  +++ V + C   G+P P   W K    +  + RI+    G SL I +   +D+
Sbjct: 282 KKSIIVTKDRGVLIECEPQGSPKPAISWRKGDKAVRANKRIAILPDG-SLRILNASKADE 340

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEI 157
           G Y C+  N  G A+  +  LSV       + P+       E++   CKA      +   
Sbjct: 341 GKYICQGVNIFGSAEIIA-SLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 399

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          N R +     + I N+     G YGC
Sbjct: 400 YWTLKGQPIDFEKEGGHFENIRAQASSADLMIRNILLMHAGRYGC 444



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 23/203 (11%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P  AP++ T   V    +  V W  V  +SL G  +G+++  W + + E S+ E    +G
Sbjct: 669 PTAAPTDVTATSV-SVSEIFVVWKHVK-ESL-GRPQGFEISYWKDTEPEDSV-ETARTRG 724

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT----PEGVPGTVQSLEAIPLG 516
             +   +      +     V A+NGA  GPPS   S  T    P   PG ++  +     
Sbjct: 725 NESFVMLTGLEGNTLYHLTVRAYNGAGYGPPSREASTTTKRHPPREPPGNLRWEQQ---- 780

Query: 517 SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
            S   L W  V+P      +MGYK+ Y+  +G   G ++E        T     +  L  
Sbjct: 781 GSQVSLGWEPVRPLANESEVMGYKVFYRQ-EGHSEGQVIE--------TQKPQAVVPLPE 831

Query: 575 STKYRIHLAGYTKAGDGAESKYL 597
           +  Y I +  Y++ GDG  S  +
Sbjct: 832 AGVYIIEVRAYSEGGDGTASSQI 854


>gi|334347566|ref|XP_001377637.2| PREDICTED: contactin-1 [Monodelphis domestica]
          Length = 1015

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 191/738 (25%), Positives = 308/738 (41%), Gaps = 92/738 (12%)

Query: 24  ISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQG 83
           +S    +  P    V  K   AL    V L C   G P+P+  W K   P+  +  IS  
Sbjct: 221 LSDRTTKLYPADIKVQFKDTYALMGHNVTLECFALGNPVPEIRWRKVLEPMPSTAEISMS 280

Query: 84  NYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET- 142
             G  L I +++  D+G+Y CE  N  G+ + +   + V A P +    E IN  E +  
Sbjct: 281 --GAVLKIFNIQLEDEGTYECEAENIRGKDR-HQARIYVQAFPEWV---EHINDTEADIG 334

Query: 143 --VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
             + + C A+G P P I W+ NG    +             + +  L   + G Y C A 
Sbjct: 335 SDLYWPCVATGKPIPTIRWLRNGYAYHKG-----------ELRLYGLTFDNAGMYQCIAE 383

Query: 201 NSLGYVYKDVYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE 258
           N+ G +Y +  + +LA AP  E+    K      G  V++ C+   APKP+ +W    + 
Sbjct: 384 NAHGAIYANAELKILAMAPTFEMNPMKKKTLAAKGGRVLIECKPKAAPKPKFSWSKGTEW 443

Query: 259 LTGG-RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDY 317
           L    R  I + G L+I ++  AD G YTCFA N  G A  +G+L + + T IT  P + 
Sbjct: 444 LVNSTRILIWDDGSLEIRNITRADEGTYTCFAENNRGKANNTGTLLITDATRITLPPANA 503

Query: 318 EVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSS 372
           +V  G++AT +C+A  DP+L L+ +W      IDF  E       F+  ++  L + K+ 
Sbjct: 504 DVTVGENATMQCSASHDPALDLTFIWSLNGYVIDFSKENSHYMRNFMIDSNGDLLIKKAQ 563

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
              +G+YTC AQT +D   A A L V+ P   P    +  + D   A ++W+  S     
Sbjct: 564 LKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGVRIEDIRDTSVA-LTWSRGSDN--H 620

Query: 433 GHFRGYKVQTWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGP 490
                Y +QT T    D + +  +    +G   +      +P  +   RV+A N    G 
Sbjct: 621 SPISKYSIQTKTILSDDWKDAKTDPSNIEGNMESARAVDLIPWMEYEFRVVATNILGTGE 680

Query: 491 PSEIISFVTPEGVPGTVQSLEAIPLGSS--AFYLKWV--KPEQPNGVLMGYKIKYQSVKG 546
           PS   + +  EG    V   +    G S     + WV    E   G   GY + ++   G
Sbjct: 681 PSLPSNRIKTEGAAPNVAPSDVGGGGGSNRELTITWVPLSREYHYGNNFGYIVAFKPFGG 740

Query: 547 ------TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV 600
                 T   P + R  Y+    T S       PST++++ +  +   GDG  S  L  V
Sbjct: 741 KEWKKVTVTNPDIGR--YVHKDETMS-------PSTEFQVKVKAFNNKGDGPFS--LTAV 789

Query: 601 PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ 660
            +   D        P ++ I   +  EI                           + W+ 
Sbjct: 790 IYSAQD---APSEAPTDVSIKVLSSSEIS--------------------------VSWKH 820

Query: 661 SELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 720
              VL  + T + Y+I+    W  +D E + + + V+  +  + +++  +P  +    V 
Sbjct: 821 ---VL--EKTVEGYQIRY---WAAQDKEAAAQRVQVS-SQDYSAKLENLLPDMQYSVEVR 871

Query: 721 AFNGAYNGPPSEIISFVT 738
           A+N A  GPPS++I   T
Sbjct: 872 AYNSAGYGPPSDVIDVST 889



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 138/373 (36%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVE-FSDQGSYTCEVS 107
           KV L C    +P P   W  +   I+  ++R S    G +L+I + +   D G Y C VS
Sbjct: 49  KVSLNCRARASPFPVYKWRMNNWDIDLTNERYSM--VGGNLVINNPDKLRDAGKYFCLVS 106

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E   +   C      +P  H        
Sbjct: 107 NIYGMVRSTEATLSFGYLDPFPPEERAEVKVKEGIGLVLLC------DPPYHFPDDLSYR 160

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           W+ N  PI     + RR V      + I N+  SD GNY C  ++    + K V+   + 
Sbjct: 161 WLLNEFPIF-ITMDKRRYVSQTNGNLYIANVEASDRGNYSCFVSSP--SITKSVFSKFIP 217

Query: 217 HAP-----------EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
             P           +I    KD Y + G  V L C   G P PE+ W    + +      
Sbjct: 218 LIPLSDRTTKLYPADIKVQFKDTYALMGHNVTLECFALGNPVPEIRWRKVLEPMPSTAEI 277

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
            +    LKI ++   D G Y C A N  G  +    + V+      +   D E + G   
Sbjct: 278 SMSGAVLKIFNIQLEDEGTYECEAENIRGKDRHQARIYVQAFPEWVEHINDTEADIGSDL 337

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WLR       + E R      Y LT       ++G Y C A+ 
Sbjct: 338 YWPCVATGKPI--PTIRWLRNGYAY-HKGELRL-----YGLTFD-----NAGMYQCIAEN 384

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 385 AHGAIYANAELKI 397



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 70/144 (48%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP++ + I+V+ + +  VSW  V    L     GY+++ W  +D E + + + V+  
Sbjct: 797 PSEAPTDVS-IKVLSSSEISVSWKHV----LEKTVEGYQIRYWAAQDKEAAAQRVQVS-S 850

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           +  + +++  +P  +    V A+N A  GPPS++I   T +  P     + +     S +
Sbjct: 851 QDYSAKLENLLPDMQYSVEVRAYNSAGYGPPSDVIDVSTRKAPPSQPPRIISSVRSGSRY 910

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  VK       + GYK+ Y+
Sbjct: 911 IITWDHVKAMSNESTVTGYKVLYR 934


>gi|112293279|ref|NP_032504.3| neural cell adhesion molecule L1 precursor [Mus musculus]
 gi|34785231|gb|AAH56988.1| L1 cell adhesion molecule [Mus musculus]
          Length = 1259

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 145/476 (30%), Positives = 211/476 (44%), Gaps = 29/476 (6%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W     P+ P+DR+   N+ K+L + +V   D G YT
Sbjct: 252 VALQGQSLILECIAEGFPTPTIKWLHPSDPM-PTDRVIYQNHNKTLQLLNVGEEDDGEYT 310

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PEI W  NG
Sbjct: 311 CLAENSLGSAR-HAYYVTVEAAPYWLQKPQSHLYGPGETARLDCQVQGRPQPEITWRING 369

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +     + + ++    + + N++ SDT    C A N  G +  + Y+ V+     I  
Sbjct: 370 MSMETVNKDQKYRIEQGSLILSNVQPSDTMVTQCEARNQHGLLLANAYIYVVQLPARILT 429

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
                Y  V+G T  L C+ FGAP P V W+  +    L   R+     G L I D+   
Sbjct: 430 KDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGTLSIRDLQAN 489

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VKE T IT  P     + G   TF C A  DPSL+ S
Sbjct: 490 DTGRYFCQAANDQNNVTILANLQVKEATQITQGPRSAIEKKGARVTFTCQASFDPSLQAS 549

Query: 341 IVWL--------RGSEPIDFESEPRFV-QSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           I W         RG     F  + + V QS DYS         D G Y+C A TELD +E
Sbjct: 550 ITWRGDGRDLQERGDSDKYFIEDGKLVIQSLDYS---------DQGNYSCVASTELDEVE 600

Query: 392 AQAT-LTVQVPLEAPS-NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE 449
           ++A  L V  P   P    +   ++   +  +SW+P   +        Y ++   ++   
Sbjct: 601 SRAQLLVVGSPGPVPHLELSDRHLLKQSQVHLSWSPA--EDHNSPIEKYDIEFEDKEMAP 658

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVP 504
                L    G  T+T + K  P      RV A N    G PS +  + VTPE  P
Sbjct: 659 EKWFSLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 713



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 159/585 (27%), Positives = 247/585 (42%), Gaps = 93/585 (15%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--NLRKSDTGN 194
           A + +++  EC A G P P I W+H   P+    P  R     +  T++  N+ + D G 
Sbjct: 253 ALQGQSLILECIAEGFPTPTIKWLHPSDPM----PTDRVIYQNHNKTLQLLNVGEEDDGE 308

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           Y C A NSLG      YV V A AP   + P+      G+T  L C+V G P+PE+ W  
Sbjct: 309 YTCLAENSLGSARHAYYVTVEA-APYWLQKPQSHLYGPGETARLDCQVQGRPQPEITWRI 367

Query: 255 NQKEL----TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH- 309
           N   +       +Y I E G L +++V  +D+    C ARN+ G    +  + V +    
Sbjct: 368 NGMSMETVNKDQKYRI-EQGSLILSNVQPSDTMVTQCEARNQHGLLLANAYIYVVQLPAR 426

Query: 310 -ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
            +T   + Y    G +A   C A   P    S+ WL        + E RF    + +L++
Sbjct: 427 ILTKDNQTYMAVEGSTAYLLCKAFGAPVP--SVQWLDEEGTTVLQDE-RFFPYANGTLSI 483

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE-------------APSNFTLIQVID 415
                 D+G+Y C+A  + + +   A L V+   +             A   FT     D
Sbjct: 484 RDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITQGPRSAIEKKGARVTFTCQASFD 543

Query: 416 -AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSIRELIV----NKGESTTTE 466
            + +A ++W        RG  R  + +  ++K    DG+  I+ L      N     +TE
Sbjct: 544 PSLQASITW--------RGDGRDLQERGDSDKYFIEDGKLVIQSLDYSDQGNYSCVASTE 595

Query: 467 VDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP---LGSSAFYLK 523
           +D+     ++ A++L                    G PG V  LE      L  S  +L 
Sbjct: 596 LDEV----ESRAQLLVV------------------GSPGPVPHLELSDRHLLKQSQVHLS 633

Query: 524 WVKPEQPNGVLMGYKIKYQSVKGTKVGP----LLERLPYISDPTTTSAKLAGLEPSTKYR 579
           W   E  N  +  Y I+++     ++ P     L ++P   + T+T+ KL+   P   Y 
Sbjct: 634 WSPAEDHNSPIEKYDIEFED---KEMAPEKWFSLGKVP--GNQTSTTLKLS---PYVHYT 685

Query: 580 IHLAGYTKAGDGAESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAP 633
             +    K G G  S     V      P KNP +V G G+  NN+VI+W  +  ++ NAP
Sbjct: 686 FRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAP 745

Query: 634 HFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
             +YR+ WR     E W +  V D     LV++N  TF PYEIKV
Sbjct: 746 QIQYRVQWRPQGKQETWREQTVSD---PFLVVSNTSTFVPYEIKV 787



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 84/186 (45%), Gaps = 9/186 (4%)

Query: 411  IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW----TEKDGEGSI-RELIVNKGESTTT 465
            I + ++   +V W PV    ++GH +GY V  W      K  +  I +  IV    +T+ 
Sbjct: 820  ITIFNSSTVLVRWRPVDLAQVKGHLKGYNVTYWWKGSQRKHSKRHIHKSHIVVPANTTSA 879

Query: 466  EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWV 525
             +    P S     V AFNG   GP SE  +F TPEGVPG  ++L       ++  L W 
Sbjct: 880  ILSGLRPYSSYHVEVQAFNGRGLGPASEW-TFSTPEGVPGHPEALHLECQSDTSLLLHWQ 938

Query: 526  KPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
             P   NGVL GY + Y  V+G     L   L   SDP   +  L  L P  +YR  L   
Sbjct: 939  PPLSHNGVLTGYLLSYHPVEGESKEQLFFNL---SDPELRTHNLTNLNPDLQYRFQLQAT 995

Query: 586  TKAGDG 591
            T+ G G
Sbjct: 996  TQQGPG 1001



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 92/387 (23%), Positives = 164/387 (42%), Gaps = 31/387 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLIIK-HVE 95
           ++ V      + L C   G P  +  W+KDG+   P +     + +  Y  S  I+ +  
Sbjct: 43  RRLVVFPTDDISLKCEARGRPQVEFRWTKDGIHFKPKEELGVVVHEAPYSGSFTIEGNNS 102

Query: 96  FSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKAS 150
           F+   QG Y C  SN +G A S+ I L    AP +   TV+P  +   E   +      S
Sbjct: 103 FAQRFQGIYRCYASNKLGTAMSHEIQLVAEGAPKWPKETVKPVEVEEGESVVLPCNPPPS 162

Query: 151 GLPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLGYV 206
             P   I+W+++   I     + R  +G N  +   N+  SD   +Y CNA    +   +
Sbjct: 163 AAPL-RIYWMNSK--ILHIKQDERVSMGQNGDLYFANVLTSDNHSDYICNAHFPGTRTII 219

Query: 207 YK---DVYV----NVLAHAPEI---TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
            K   D+ V    +++   P +   T +      + G++++L C   G P P + W+H  
Sbjct: 220 QKEPIDLRVKPTNSMIDRKPRLLFPTNSSSRLVALQGQSLILECIAEGFPTPTIKWLHPS 279

Query: 257 KELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE 315
             +   R         L++ +V   D GEYTC A N LG+A+ +  +TV+   +   +P+
Sbjct: 280 DPMPTDRVIYQNHNKTLQLLNVGEEDDGEYTCLAENSLGSARHAYYVTVEAAPYWLQKPQ 339

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
            +    G++A   C     P  +  I W      ++  ++ +  +    SL ++     D
Sbjct: 340 SHLYGPGETARLDCQVQGRP--QPEITWRINGMSMETVNKDQKYRIEQGSLILSNVQPSD 397

Query: 376 SGQYTCRAQTELDFIEAQATL-TVQVP 401
           +    C A+ +   + A A +  VQ+P
Sbjct: 398 TMVTQCEARNQHGLLLANAYIYVVQLP 424


>gi|148697923|gb|EDL29870.1| L1 cell adhesion molecule [Mus musculus]
          Length = 1255

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 145/476 (30%), Positives = 211/476 (44%), Gaps = 29/476 (6%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W     P+ P+DR+   N+ K+L + +V   D G YT
Sbjct: 247 VALQGQSLILECIAEGFPTPTIKWLHPSDPM-PTDRVIYQNHNKTLQLLNVGEEDDGEYT 305

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PEI W  NG
Sbjct: 306 CLAENSLGSAR-HAYYVTVEAAPYWLQKPQSHLYGPGETARLDCQVQGRPQPEITWRING 364

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +     + + ++    + + N++ SDT    C A N  G +  + Y+ V+     I  
Sbjct: 365 MSMETVNKDQKYRIEQGSLILSNVQPSDTMVTQCEARNQHGLLLANAYIYVVQLPARILT 424

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
                Y  V+G T  L C+ FGAP P V W+  +    L   R+     G L I D+   
Sbjct: 425 KDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGTLSIRDLQAN 484

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VKE T IT  P     + G   TF C A  DPSL+ S
Sbjct: 485 DTGRYFCQAANDQNNVTILANLQVKEATQITQGPRSAIEKKGARVTFTCQASFDPSLQAS 544

Query: 341 IVWL--------RGSEPIDFESEPRFV-QSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           I W         RG     F  + + V QS DYS         D G Y+C A TELD +E
Sbjct: 545 ITWRGDGRDLQERGDSDKYFIEDGKLVIQSLDYS---------DQGNYSCVASTELDEVE 595

Query: 392 AQAT-LTVQVPLEAPS-NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE 449
           ++A  L V  P   P    +   ++   +  +SW+P   +        Y ++   ++   
Sbjct: 596 SRAQLLVVGSPGPVPHLELSDRHLLKQSQVHLSWSPA--EDHNSPIEKYDIEFEDKEMAP 653

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVP 504
                L    G  T+T + K  P      RV A N    G PS +  + VTPE  P
Sbjct: 654 EKWFSLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 708



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 159/585 (27%), Positives = 247/585 (42%), Gaps = 93/585 (15%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--NLRKSDTGN 194
           A + +++  EC A G P P I W+H   P+    P  R     +  T++  N+ + D G 
Sbjct: 248 ALQGQSLILECIAEGFPTPTIKWLHPSDPM----PTDRVIYQNHNKTLQLLNVGEEDDGE 303

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           Y C A NSLG      YV V A AP   + P+      G+T  L C+V G P+PE+ W  
Sbjct: 304 YTCLAENSLGSARHAYYVTVEA-APYWLQKPQSHLYGPGETARLDCQVQGRPQPEITWRI 362

Query: 255 NQKEL----TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH- 309
           N   +       +Y I E G L +++V  +D+    C ARN+ G    +  + V +    
Sbjct: 363 NGMSMETVNKDQKYRI-EQGSLILSNVQPSDTMVTQCEARNQHGLLLANAYIYVVQLPAR 421

Query: 310 -ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
            +T   + Y    G +A   C A   P    S+ WL        + E RF    + +L++
Sbjct: 422 ILTKDNQTYMAVEGSTAYLLCKAFGAPVP--SVQWLDEEGTTVLQDE-RFFPYANGTLSI 478

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE-------------APSNFTLIQVID 415
                 D+G+Y C+A  + + +   A L V+   +             A   FT     D
Sbjct: 479 RDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITQGPRSAIEKKGARVTFTCQASFD 538

Query: 416 -AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSIRELIV----NKGESTTTE 466
            + +A ++W        RG  R  + +  ++K    DG+  I+ L      N     +TE
Sbjct: 539 PSLQASITW--------RGDGRDLQERGDSDKYFIEDGKLVIQSLDYSDQGNYSCVASTE 590

Query: 467 VDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP---LGSSAFYLK 523
           +D+     ++ A++L                    G PG V  LE      L  S  +L 
Sbjct: 591 LDEV----ESRAQLLVV------------------GSPGPVPHLELSDRHLLKQSQVHLS 628

Query: 524 WVKPEQPNGVLMGYKIKYQSVKGTKVGP----LLERLPYISDPTTTSAKLAGLEPSTKYR 579
           W   E  N  +  Y I+++     ++ P     L ++P   + T+T+ KL+   P   Y 
Sbjct: 629 WSPAEDHNSPIEKYDIEFED---KEMAPEKWFSLGKVP--GNQTSTTLKLS---PYVHYT 680

Query: 580 IHLAGYTKAGDGAESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAP 633
             +    K G G  S     V      P KNP +V G G+  NN+VI+W  +  ++ NAP
Sbjct: 681 FRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAP 740

Query: 634 HFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
             +YR+ WR     E W +  V D     LV++N  TF PYEIKV
Sbjct: 741 QIQYRVQWRPQGKQETWREQTVSD---PFLVVSNTSTFVPYEIKV 782



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 84/186 (45%), Gaps = 9/186 (4%)

Query: 411 IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW----TEKDGEGSI-RELIVNKGESTTT 465
           I + ++   +V W PV    ++GH +GY V  W      K  +  I +  IV    +T+ 
Sbjct: 815 ITIFNSSTVLVRWRPVDLAQVKGHLKGYNVTYWWKGSQRKHSKRHIHKSHIVVPANTTSA 874

Query: 466 EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWV 525
            +    P S     V AFNG   GP SE  +F TPEGVPG  ++L       ++  L W 
Sbjct: 875 ILSGLRPYSSYHVEVQAFNGRGLGPASEW-TFSTPEGVPGHPEALHLECQSDTSLLLHWQ 933

Query: 526 KPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
            P   NGVL GY + Y  V+G     L   L   SDP   +  L  L P  +YR  L   
Sbjct: 934 PPLSHNGVLTGYLLSYHPVEGESKEQLFFNL---SDPELRTHNLTNLNPDLQYRFQLQAT 990

Query: 586 TKAGDG 591
           T+ G G
Sbjct: 991 TQQGPG 996



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 92/387 (23%), Positives = 164/387 (42%), Gaps = 31/387 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLIIK-HVE 95
           ++ V      + L C   G P  +  W+KDG+   P +     + +  Y  S  I+ +  
Sbjct: 38  RRLVVFPTDDISLKCEARGRPQVEFRWTKDGIHFKPKEELGVVVHEAPYSGSFTIEGNNS 97

Query: 96  FSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKAS 150
           F+   QG Y C  SN +G A S+ I L    AP +   TV+P  +   E   +      S
Sbjct: 98  FAQRFQGIYRCYASNKLGTAMSHEIQLVAEGAPKWPKETVKPVEVEEGESVVLPCNPPPS 157

Query: 151 GLPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLGYV 206
             P   I+W+++   I     + R  +G N  +   N+  SD   +Y CNA    +   +
Sbjct: 158 AAPL-RIYWMNSK--ILHIKQDERVSMGQNGDLYFANVLTSDNHSDYICNAHFPGTRTII 214

Query: 207 YK---DVYV----NVLAHAPEI---TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
            K   D+ V    +++   P +   T +      + G++++L C   G P P + W+H  
Sbjct: 215 QKEPIDLRVKPTNSMIDRKPRLLFPTNSSSRLVALQGQSLILECIAEGFPTPTIKWLHPS 274

Query: 257 KELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE 315
             +   R         L++ +V   D GEYTC A N LG+A+ +  +TV+   +   +P+
Sbjct: 275 DPMPTDRVIYQNHNKTLQLLNVGEEDDGEYTCLAENSLGSARHAYYVTVEAAPYWLQKPQ 334

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
            +    G++A   C     P  +  I W      ++  ++ +  +    SL ++     D
Sbjct: 335 SHLYGPGETARLDCQVQGRP--QPEITWRINGMSMETVNKDQKYRIEQGSLILSNVQPSD 392

Query: 376 SGQYTCRAQTELDFIEAQATL-TVQVP 401
           +    C A+ +   + A A +  VQ+P
Sbjct: 393 TMVTQCEARNQHGLLLANAYIYVVQLP 419


>gi|115558|sp|P11627.1|L1CAM_MOUSE RecName: Full=Neural cell adhesion molecule L1; Short=N-CAM-L1;
           Short=NCAM-L1; AltName: CD_antigen=CD171; Flags:
           Precursor
 gi|53337|emb|CAA31368.1| unnamed protein product [Mus musculus]
          Length = 1260

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 145/476 (30%), Positives = 211/476 (44%), Gaps = 29/476 (6%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W     P+ P+DR+   N+ K+L + +V   D G YT
Sbjct: 252 VALQGQSLILECIAEGFPTPTIKWLHPSDPM-PTDRVIYQNHNKTLQLLNVGEEDDGEYT 310

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PEI W  NG
Sbjct: 311 CLAENSLGSAR-HAYYVTVEAAPYWLQKPQSHLYGPGETARLDCQVQGRPQPEITWRING 369

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +     + + ++    + + N++ +DT    C A N  G +  + Y+ V+     I  
Sbjct: 370 MSMETVNKDQKYRIEQGSLILSNVQPTDTMVTQCEARNQHGLLLANAYIYVVQLPARILT 429

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
                Y  V+G T  L C+ FGAP P V W+  +    L   R+     G L I D+   
Sbjct: 430 KDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGTLSIRDLQAN 489

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VKE T IT  P     + G   TF C A  DPSL+ S
Sbjct: 490 DTGRYFCQAANDQNNVTILANLQVKEATQITQGPRSAIEKKGARVTFTCQASFDPSLQAS 549

Query: 341 IVWL--------RGSEPIDFESEPRFV-QSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           I W         RG     F  + + V QS DYS         D G Y+C A TELD +E
Sbjct: 550 ITWRGDGRDLQERGDSDKYFIEDGKLVIQSLDYS---------DQGNYSCVASTELDEVE 600

Query: 392 AQAT-LTVQVPLEAPS-NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE 449
           ++A  L V  P   P    +   ++   +  +SW+P   +        Y ++   ++   
Sbjct: 601 SRAQLLVVGSPGPVPHLELSDRHLLKQSQVHLSWSPA--EDHNSPIEKYDIEFEDKEMAP 658

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVP 504
                L    G  T+T + K  P      RV A N    G PS +  S VTPE  P
Sbjct: 659 EKWFSLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSESVVTPEAAP 713



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 159/585 (27%), Positives = 246/585 (42%), Gaps = 93/585 (15%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--NLRKSDTGN 194
           A + +++  EC A G P P I W+H   P+    P  R     +  T++  N+ + D G 
Sbjct: 253 ALQGQSLILECIAEGFPTPTIKWLHPSDPM----PTDRVIYQNHNKTLQLLNVGEEDDGE 308

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           Y C A NSLG      YV V A AP   + P+      G+T  L C+V G P+PE+ W  
Sbjct: 309 YTCLAENSLGSARHAYYVTVEA-APYWLQKPQSHLYGPGETARLDCQVQGRPQPEITWRI 367

Query: 255 NQKEL----TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH- 309
           N   +       +Y I E G L +++V   D+    C ARN+ G    +  + V +    
Sbjct: 368 NGMSMETVNKDQKYRI-EQGSLILSNVQPTDTMVTQCEARNQHGLLLANAYIYVVQLPAR 426

Query: 310 -ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
            +T   + Y    G +A   C A   P    S+ WL        + E RF    + +L++
Sbjct: 427 ILTKDNQTYMAVEGSTAYLLCKAFGAPVP--SVQWLDEEGTTVLQDE-RFFPYANGTLSI 483

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE-------------APSNFTLIQVID 415
                 D+G+Y C+A  + + +   A L V+   +             A   FT     D
Sbjct: 484 RDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITQGPRSAIEKKGARVTFTCQASFD 543

Query: 416 -AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSIRELIV----NKGESTTTE 466
            + +A ++W        RG  R  + +  ++K    DG+  I+ L      N     +TE
Sbjct: 544 PSLQASITW--------RGDGRDLQERGDSDKYFIEDGKLVIQSLDYSDQGNYSCVASTE 595

Query: 467 VDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP---LGSSAFYLK 523
           +D+     ++ A++L                    G PG V  LE      L  S  +L 
Sbjct: 596 LDEV----ESRAQLLVV------------------GSPGPVPHLELSDRHLLKQSQVHLS 633

Query: 524 WVKPEQPNGVLMGYKIKYQSVKGTKVGP----LLERLPYISDPTTTSAKLAGLEPSTKYR 579
           W   E  N  +  Y I+++     ++ P     L ++P   + T+T+ KL+   P   Y 
Sbjct: 634 WSPAEDHNSPIEKYDIEFED---KEMAPEKWFSLGKVP--GNQTSTTLKLS---PYVHYT 685

Query: 580 IHLAGYTKAGDGAESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAP 633
             +    K G G  S     V      P KNP +V G G+  NN+VI+W  +  ++ NAP
Sbjct: 686 FRVTAINKYGPGEPSPVSESVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAP 745

Query: 634 HFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
             +YR+ WR     E W +  V D     LV++N  TF PYEIKV
Sbjct: 746 QIQYRVQWRPQGKQETWRKQTVSD---PFLVVSNTSTFVPYEIKV 787



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 85/189 (44%), Gaps = 9/189 (4%)

Query: 411  IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW----TEKDGEGSI-RELIVNKGESTTT 465
            I + ++   +V W PV    ++GH +GY V  W      K  +  I +  IV    +T+ 
Sbjct: 820  ITIFNSSTVLVRWRPVDLAQVKGHLKGYNVTYWWKGSQRKHSKRHIHKSHIVVPANTTSA 879

Query: 466  EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWV 525
             +    P S     V AFNG   GP SE  +F TPEGVPG  ++L       ++  L W 
Sbjct: 880  ILSGLRPYSSYHVEVQAFNGRGLGPASEW-TFSTPEGVPGHPEALHLECQSDTSLLLHWQ 938

Query: 526  KPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
             P   NGVL GY + Y  V+G     L   L   SDP   +  L  L P  +YR  L   
Sbjct: 939  PPLSHNGVLTGYLLSYHPVEGESKEQLFFNL---SDPELRTHNLTNLNPDLQYRFQLQAT 995

Query: 586  TKAGDGAES 594
            T+ G   E+
Sbjct: 996  TQQGGPGEA 1004



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 93/387 (24%), Positives = 165/387 (42%), Gaps = 31/387 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLIIK-HVE 95
           ++ V      + L C   G P  +  W+KDG+   P +     + +  Y  S  I+ +  
Sbjct: 43  RRLVVFPTDDISLKCEARGRPQVEFRWTKDGIHFKPKEELGVVVHEAPYSGSFTIEGNNS 102

Query: 96  FSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKAS 150
           F+   QG Y C  SN +G A S+ I L    AP +   TV+P  +   E   +      S
Sbjct: 103 FAQRFQGIYRCYASNKLGTAMSHEIQLVAEGAPKWPKETVKPVEVEEGESVVLPCNPPPS 162

Query: 151 GLPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLGYV 206
             P P I+W+++   I     + R  +G N  +   N+  SD   +Y CNA    +   +
Sbjct: 163 AAP-PRIYWMNSK--IFDIKQDERVSMGQNGDLYFANVLTSDNHSDYICNAHFPGTRTII 219

Query: 207 YK---DVYV----NVLAHAPEI---TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
            K   D+ V    +++   P +   T +      + G++++L C   G P P + W+H  
Sbjct: 220 QKEPIDLRVKPTNSMIDRKPRLLFPTNSSSRLVALQGQSLILECIAEGFPTPTIKWLHPS 279

Query: 257 KELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE 315
             +   R         L++ +V   D GEYTC A N LG+A+ +  +TV+   +   +P+
Sbjct: 280 DPMPTDRVIYQNHNKTLQLLNVGEEDDGEYTCLAENSLGSARHAYYVTVEAAPYWLQKPQ 339

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
            +    G++A   C     P  +  I W      ++  ++ +  +    SL ++     D
Sbjct: 340 SHLYGPGETARLDCQVQGRP--QPEITWRINGMSMETVNKDQKYRIEQGSLILSNVQPTD 397

Query: 376 SGQYTCRAQTELDFIEAQATL-TVQVP 401
           +    C A+ +   + A A +  VQ+P
Sbjct: 398 TMVTQCEARNQHGLLLANAYIYVVQLP 424


>gi|283046667|ref|NP_001028531.2| contactin-5 isoform 2 precursor [Mus musculus]
          Length = 893

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 160/609 (26%), Positives = 256/609 (42%), Gaps = 45/609 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           A +   V++ C   G P+P   W K    I    R+ +      L I +++  D G Y C
Sbjct: 106 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRKSQ--AVLEIPNLQLDDAGIYEC 163

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N  G+  S+   L +   P++  +           + +ECKA+G P P   W+ NG 
Sbjct: 164 TAENSRGK-NSFRGQLQIFTYPHWVQKLNDTQLDSGSPLQWECKATGKPRPTYRWLKNGA 222

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--EIT 222
           P+    P  R       + I+++ +SD G Y C A N  G +Y    + +LA  P  E+ 
Sbjct: 223 PLL---PQSRVDTVNGILAIQSVNQSDAGMYQCLAENKYGAIYASAELKILASPPSFELN 279

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFAD 281
           +  K       + V++ C   G+PKP ++W    K +    R  IL  G L+I + + AD
Sbjct: 280 QVKKSIIVTKDRGVLIECEPQGSPKPAISWRKGDKAVRANKRIAILPDGSLRILNASKAD 339

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+Y C   N  G+A+   SL+VKE T I   P+  E+  G+S    C A+ D SL ++ 
Sbjct: 340 EGKYICQGVNIFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 399

Query: 342 VWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A L
Sbjct: 400 YWTLKGQPIDFEKEGGHFENIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAEL 459

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKDGE 449
            V+ P   P    +++ I    A +SW+P +          Y +Q        W      
Sbjct: 460 LVRGP-PGPPGVVIVEEITESTATLSWSPATDN--HSPISSYNLQARSPFSLGWQTVK-- 514

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQ 508
            ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T  
Sbjct: 515 -TVPEVITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSIPSRMIRTNEAVPKTAP 571

Query: 509 SLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISDPT 563
           S  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+ +
Sbjct: 572 SNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSEAS 626

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNL 618
               +   + P T + + +  Y   GDG  S+ +        P   P +V     + + +
Sbjct: 627 KFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPTAAPTDVTATSVSVSEI 686

Query: 619 VISWTAMPE 627
            + W  + E
Sbjct: 687 FVVWKHVKE 695



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 165/677 (24%), Positives = 245/677 (36%), Gaps = 105/677 (15%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS----IDL---SVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S    + L    V+      +E  F   + A
Sbjct: 47  NLYISKVQTSDVGSYICLVKNAVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 106

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I NL+  D G Y 
Sbjct: 107 AKGTTVKMECFALGNPVPTITWMKVNG----YIPSKSRLRKSQAVLEIPNLQLDDAGIYE 162

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + +  + P   +   D     G  +   C+  G P+P   W+ N 
Sbjct: 163 CTAENSRGKNSFRGQLQIFTY-PHWVQKLNDTQLDSGSPLQWECKATGKPRPTYRWLKNG 221

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
             L          G L I  V  +D+G Y C A NK G    S  L       I   P  
Sbjct: 222 APLLPQSRVDTVNGILAIQSVNQSDAGMYQCLAENKYGAIYASAEL------KILASPPS 275

Query: 317 YE---------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
           +E         V   +     C     P  K +I W +G + +   +  R     D SL 
Sbjct: 276 FELNQVKKSIIVTKDRGVLIECEPQGSP--KPAISWRKGDKAV--RANKRIAILPDGSLR 331

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI----------QVI 414
           +  +S+ D G+Y C+        E  A+L+V+ P      P    L            + 
Sbjct: 332 ILNASKADEGKYICQGVNIFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIH 391

Query: 415 DAKKAVVSW-----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDK 469
           DA   V  +      P+  +   GHF   + Q       +  IR +++         V  
Sbjct: 392 DASLDVTFYWTLKGQPIDFEKEGGHFENIRAQA---SSADLMIRNILLMHAGRYGCRVQT 448

Query: 470 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQ 529
              +  + A +L       GPP          G PG V   E   +  S   L W     
Sbjct: 449 TADSVSDEAELLV-----RGPP----------GPPGVVIVEE---ITESTATLSWSPATD 490

Query: 530 PNGVLMGYKIK--------YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIH 581
            +  +  Y ++        +Q+VK          +P +      SA    L P  +Y   
Sbjct: 491 NHSPISSYNLQARSPFSLGWQTVK---------TVPEVITGDMESAMAVDLNPWVEYEFR 541

Query: 582 LAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHF 635
           +      G G  S      +    VP   P NV GR    + LVI+W  + E   N   F
Sbjct: 542 VVATNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSGRSGRRHELVIAWEPVSEEFQNGEGF 601

Query: 636 KYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRE 693
            Y + +R + T   W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +
Sbjct: 602 GYIVAFRPNGT-RGWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQ 658

Query: 694 LIV---NKGESTTTEVD 707
           ++V    +GE T    D
Sbjct: 659 IVVICSAEGEPTAAPTD 675



 Score = 47.0 bits (110), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  +++ V + C   G+P P   W K    +  + RI+    G SL I +   +D+
Sbjct: 282 KKSIIVTKDRGVLIECEPQGSPKPAISWRKGDKAVRANKRIAILPDG-SLRILNASKADE 340

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEI 157
           G Y C+  N  G A+  +  LSV       + P+       E++   CKA      +   
Sbjct: 341 GKYICQGVNIFGSAEIIA-SLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 399

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          N R +     + I N+     G YGC
Sbjct: 400 YWTLKGQPIDFEKEGGHFENIRAQASSADLMIRNILLMHAGRYGC 444



 Score = 43.5 bits (101), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 86/203 (42%), Gaps = 23/203 (11%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P  AP++ T   V    +  V W  V  +SL G  +G+++  W + + E S+ E +  +G
Sbjct: 669 PTAAPTDVTATSV-SVSEIFVVWKHVK-ESL-GRPQGFEISYWKDTEPEDSV-ETVRTRG 724

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT----PEGVPGTVQSLEAIPLG 516
             +   +      +     V A+NGA  GPPS   S  T    P   PG ++  +     
Sbjct: 725 NESFVMLTGLEGNTLYHLTVRAYNGAGYGPPSREASTTTKRHPPREPPGNLRWEQQ---- 780

Query: 517 SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
            S   L W  V+P      +MGYK+ Y+  +G   G ++E        T     +  L  
Sbjct: 781 GSQVSLGWEPVRPLANESEVMGYKVFYRQ-EGHSEGQVIE--------TQKPQAVVPLPE 831

Query: 575 STKYRIHLAGYTKAGDGAESKYL 597
           +  Y I +  Y++ GDG  S  +
Sbjct: 832 AGVYIIEVRAYSEGGDGTASSQI 854


>gi|449474272|ref|XP_002186724.2| PREDICTED: contactin-3, partial [Taeniopygia guttata]
          Length = 916

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 173/650 (26%), Positives = 286/650 (44%), Gaps = 48/650 (7%)

Query: 31  HAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSL 89
           + PK +    +   A +   V+L C   G P+PQ  W + DG+P     ++ + N    +
Sbjct: 125 YEPKIEVQFPETMAAAKGSTVKLECFALGNPVPQINWRRTDGLPFPSKIKLRKSN--GMI 182

Query: 90  IIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA 149
            I + +  D G Y C   N  G+  +    L+  A P++    + +  A E+T+ ++C+A
Sbjct: 183 EIPNFQQEDAGLYECITENSRGKNIARG-RLTYYAKPHWIQTIKDMEVAVEDTLYWDCRA 241

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           SG P+P   W+ NG+   Q     R ++    +TI NL  +D+G Y C A N  G +   
Sbjct: 242 SGKPKPSYRWLKNGE---QLAIEGRIQIENGALTISNLNLTDSGRYQCIAENKHGVISSS 298

Query: 210 VYVNVLAHAPEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTI 266
             + V+A AP+ +++P  +      G TV   C+    PK + +W    ++L    R ++
Sbjct: 299 AELRVVASAPDFSKSPMKKLIQVQIGSTVDFECKPKAFPKAKRSWKKGGEQLQENERISL 358

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
           L+ G L+I +V   D+G YTC A N+ GTA+GS SL V E T IT  P + +V  G+S  
Sbjct: 359 LKDGGLRIANVTKGDAGSYTCLATNQFGTARGSTSLVVTEPTRITLAPSNMDVTVGESVV 418

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCR 382
             C    DP L +S  W       DF+ +    +    S    L +       SG+Y C 
Sbjct: 419 LPCQVQHDPLLDISFTWYFNGTLTDFQRDASHFEKVGGSASGDLMIRNIQLKHSGKYVCM 478

Query: 383 AQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF 435
            +TE+D + + A L V+     P +  + +V D   A +SW       +PV+  S++   
Sbjct: 479 VKTEVDSVASAADLIVRGSPGPPEHVRVDEVTDT-TAQISWQEGTDNHSPVTTYSIQART 537

Query: 436 ---RGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 492
               G++  T        ++ ++I   G++ T+ V    P  +   RV+A N    G PS
Sbjct: 538 PFSVGWQRAT--------TVPDVI--DGKTFTSTVVDLNPWVEYEFRVVATNKIGGGEPS 587

Query: 493 EIISFV-TPEGVPGTVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTK 548
                V T E VP    S  +   GS S   + W  V  E  NG   GY + ++    T 
Sbjct: 588 LPSEKVRTEEAVPEIPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPSGTTT 647

Query: 549 VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFK 603
               ++ +    D      +   + P + Y + +  Y   G+G  S    +F     P  
Sbjct: 648 ---WIQTVVTSPDTPRYVFRNESILPFSPYEVKVGVYNNKGEGPFSAVATVFSAEEEPST 704

Query: 604 NPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI-FWRRHNTGEAWNQ 652
            P  V     + + + +SWTA+P    N     Y + +W +    E+ N+
Sbjct: 705 APSGVSATSLSSSAIQVSWTAIPWKMSNGRLLGYEVRYWNKGQKEESSNR 754



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 161/636 (25%), Positives = 241/636 (37%), Gaps = 84/636 (13%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+Y+C V++    +        ++           P   V+ PE + AA
Sbjct: 81  LYIAKVEPSDVGNYSCVVTSRASSSPVLGSPTPLVLRTDGVMGEYEPKIEVQFPETMAAA 140

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P    P   + +     I I N ++ D G Y C
Sbjct: 141 KGSTVKLECFALGNPVPQINWRRTDGLPF---PSKIKLRKSNGMIEIPNFQQEDAGLYEC 197

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
              NS G   K++    L +   P   +  KD       T+   CR  G PKP   W+ N
Sbjct: 198 ITENSRG---KNIARGRLTYYAKPHWIQTIKDMEVAVEDTLYWDCRASGKPKPSYRWLKN 254

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
            ++L       +E G L I+++   DSG Y C A NK G    S  L  V      +  P
Sbjct: 255 GEQLAIEGRIQIENGALTISNLNLTDSGRYQCIAENKHGVISSSAELRVVASAPDFSKSP 314

Query: 315 ED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
                +V+ G +  F C   + P  K S  W +G E    +   R     D  L +   +
Sbjct: 315 MKKLIQVQIGSTVDFECKPKAFPKAKRS--WKKGGE--QLQENERISLLKDGGLRIANVT 370

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAV----VSWNP 425
           + D+G YTC A  +        +L V  P     APSN   + V   +  V    V  +P
Sbjct: 371 KGDAGSYTCLATNQFGTARGSTSLVVTEPTRITLAPSN---MDVTVGESVVLPCQVQHDP 427

Query: 426 VSPQSLRGHFRG-----YKVQTWTEKDGEGSIRELIVNKGE---------STTTEVDKFV 471
           +   S   +F G      +  +  EK G  +  +L++   +            TEVD   
Sbjct: 428 LLDISFTWYFNGTLTDFQRDASHFEKVGGSASGDLMIRNIQLKHSGKYVCMVKTEVDSVA 487

Query: 472 PASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPN 531
            A+    R                      G PG  + +    +  +   + W +    +
Sbjct: 488 SAADLIVR----------------------GSPGPPEHVRVDEVTDTTAQISWQEGTDNH 525

Query: 532 GVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGD 590
             +  Y I  Q+     VG      +P + D  T ++ +  L P  +Y   +    K G 
Sbjct: 526 SPVTTYSI--QARTPFSVGWQRATTVPDVIDGKTFTSTVVDLNPWVEYEFRVVATNKIGG 583

Query: 591 GAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           G  S      +    VP   P  V G G + + LVI+W  +PE   N   F Y + +R  
Sbjct: 584 GEPSLPSEKVRTEEAVPEIPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPS 643

Query: 645 NTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
            T   W Q  V        V  N+    F PYE+KV
Sbjct: 644 GT-TTWIQTVVTSPDTPRYVFRNESILPFSPYEVKV 678



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 157/641 (24%), Positives = 257/641 (40%), Gaps = 79/641 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +    RI   N   +L I ++  +D G Y C   N  G   
Sbjct: 239 CRASGKPKPSYRWLKNGEQLAIEGRIQIEN--GALTISNLNLTDSGRYQCIAENKHGVIS 296

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           S S +L V+A AP F+  P  + I      TV FECK    P+ +  W   G+ + +   
Sbjct: 297 S-SAELRVVASAPDFSKSPMKKLIQVQIGSTVDFECKPKAFPKAKRSWKKGGEQLQENER 355

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
               K G  RI   N+ K D G+Y C ATN  G       + V+     IT AP +    
Sbjct: 356 ISLLKDGGLRIA--NVTKGDAGSYTCLATNQFGTARGSTSL-VVTEPTRITLAPSNMDVT 412

Query: 232 DGKTVVLTCRVFGAPKPEVN--WIHN-----------QKELTGGRYTILETGDLKITDVA 278
            G++VVL C+V   P  +++  W  N             E  GG      +GDL I ++ 
Sbjct: 413 VGESVVLPCQVQHDPLLDISFTWYFNGTLTDFQRDASHFEKVGGS----ASGDLMIRNIQ 468

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVK------EHTHITDQPEDYEVEAGQSATFRCNAV 332
              SG+Y C  + ++ +   +  L V+      EH  + +  +     + Q  T   + V
Sbjct: 469 LKHSGKYVCMVKTEVDSVASAADLIVRGSPGPPEHVRVDEVTDTTAQISWQEGTDNHSPV 528

Query: 333 SDPSLK----LSIVWLRGSEPIDFESEPRFVQSN-------DYSLTVTKSSELDSGQYTC 381
           +  S++     S+ W R +   D      F  +        +Y   V  ++++  G+ + 
Sbjct: 529 TTYSIQARTPFSVGWQRATTVPDVIDGKTFTSTVVDLNPWVEYEFRVVATNKIGGGEPS- 587

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
                   + ++   T +   E P +          + V++W+PV  +   G   GY V 
Sbjct: 588 --------LPSEKVRTEEAVPEIPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVA 639

Query: 442 -------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
                  TW +           V + ES        +P S    +V  +N    GP S +
Sbjct: 640 FRPSGTTTWIQTVVTSPDTPRYVFRNES-------ILPFSPYEVKVGVYNNKGEGPFSAV 692

Query: 495 ISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGP 551
            +  + E  P T  S + A  L SSA  + W  +  +  NG L+GY+++Y + KG K   
Sbjct: 693 ATVFSAEEEPSTAPSGVSATSLSSSAIQVSWTAIPWKMSNGRLLGYEVRYWN-KGQK-EE 750

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPD 606
              R+    +   TS K+ GL  +  Y   +  Y  AG G  S  +        P + P 
Sbjct: 751 SSNRVKAAGN--ETSIKITGLRSNLAYYTAVRAYNSAGAGPFSATVNATTKKPPPSQPPG 808

Query: 607 NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTG 647
           NV     T + +V+SW  +  +++ +    Y++ +R  + G
Sbjct: 809 NVVWN-VTDSRVVLSWEEVRAMDNESEVTGYKVLYRTSSQG 848


>gi|332261219|ref|XP_003279672.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-2 [Nomascus
           leucogenys]
          Length = 2172

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 147/513 (28%), Positives = 219/513 (42%), Gaps = 24/513 (4%)

Query: 128 FTVEPE-FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIEN 186
           F  EPE  I A  E+ V   C+A G+P P I W ++   +        R      + I  
Sbjct: 310 FVKEPERHITAEMEKVVDIPCQAKGVPPPSITWYNDAAVVEVEKLARFRHRSDEGLQISG 369

Query: 187 LRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAP 246
           L   DTG + C A N+ G V    Y+ V + AP IT  P D   +DG +VVL C   GAP
Sbjct: 370 LVPDDTGMFQCFARNAAGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLACETSGAP 429

Query: 247 KPEVNWIHNQKELTGG-----RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGS 301
           +P + W   ++ L  G     R+T LE+G L I+    +D+G YTC A N  G  + S  
Sbjct: 430 RPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASAD 489

Query: 302 LTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS 361
           L V   T IT  P+D  V  G  A+  C    DP + +  +W +    +  ES PR    
Sbjct: 490 LVVWARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTIRYIWEKDGATLGIESNPRIRLD 549

Query: 362 NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSN-FTLIQVIDAKKAV 420
            + SL ++++   D G YTCR  +        A L V+    AP +    +  ++ +   
Sbjct: 550 RNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVKQLPHAPEHPVATLSTVERRAIN 609

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           ++W    P         Y ++  +E +   ++    V+  ++T+  V   VPA     R+
Sbjct: 610 LTWT--KPFDGNSPLIRYVLEM-SENNAPWTVLLASVDP-KATSVTVKGLVPARSYQFRL 665

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSS--AFYLKWVKPEQP--NGVLMG 536
            A N    G  S+    V+    P T      I  G +  +  ++W  P +   NG+L G
Sbjct: 666 CAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKG 725

Query: 537 YKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK- 595
           Y I+Y  + G  VG    +   I+D    +  L  L   T Y I +A Y  AG G  S  
Sbjct: 726 YIIRY-CLAGLPVG---YQFKNITDADVNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSK 781

Query: 596 ----YLFYVPFKNPDNVEGRGSTPNNLVISWTA 624
                L  VP   P NV    +    +  +W A
Sbjct: 782 VTEWTLQGVPTVLPGNVHTEATNSTTIRFTWNA 814



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 148/592 (25%), Positives = 224/592 (37%), Gaps = 78/592 (13%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEV 106
           V L C   G P P   W K G  I  S  +    +      SL+I     SD G+YTC  
Sbjct: 419 VVLACETSGAPRPAITWQK-GERILASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLA 477

Query: 107 SN--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--WVHN 162
           +N  GV EA   S DL V A    T  P+  +  +    +  C  +  P   I   W  +
Sbjct: 478 TNSRGVDEA---SADLVVWARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTIRYIWEKD 534

Query: 163 GKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAP 219
           G  +     NPR ++  N  + I      D G Y C   ++ G   +  ++ V  L HAP
Sbjct: 535 GATLG-IESNPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVKQLPHAP 593

Query: 220 EITEAPKDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVA 278
           E   A     TV+ + + LT  + F    P + ++    E       +L + D K T V 
Sbjct: 594 EHPVATLS--TVERRAINLTWTKPFDGNSPLIRYVLEMSENNAPWTVLLASVDPKATSVT 651

Query: 279 F-----ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS--ATFRCN- 330
                 A S ++   A N +G  Q S      + T     PE+      Q+  A+ R N 
Sbjct: 652 VKGLVPARSYQFRLCAVNDVGKGQFS------KDTERVSLPEEPPTAPPQNVIASGRTNQ 705

Query: 331 -----------AVSDPSLKLSIV-WLRGSEPIDFESE------------PRFVQSNDYSL 366
                      +  +  LK  I+ +     P+ ++ +               +   +Y +
Sbjct: 706 SIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLIIWTNYEI 765

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPV 426
            V   +    G Y+ +  TE         L   V  EA +N T I+         +WN  
Sbjct: 766 EVAAYNSAGLGVYSSKV-TEWTLQGVPTVLPGNVHTEA-TNSTTIRF--------TWNAT 815

Query: 427 SPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR----VLA 482
           SPQ + G  +GYK+  W E + E  +  +        +  V  FV   K F      VL 
Sbjct: 816 SPQFINGINQGYKLIAW-EPEQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYFTSVLC 873

Query: 483 FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
           F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY+I ++
Sbjct: 874 FTTPGDGPRSTPQLVRTHEDVPGPVGYLSFSEILDTSLKVSWQEPGEKNGILTGYRISWE 933

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
               T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 934 EYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTWKGQGQVS 980



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 119/486 (24%), Positives = 183/486 (37%), Gaps = 46/486 (9%)

Query: 216 AHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQKEL---TGGRYTILETGD 271
           A   +  + P+   T + + VV + C+  G P P + W ++   +      R+       
Sbjct: 305 ARTAQFVKEPERHITAEMEKVVDIPCQAKGVPPPSITWYNDAAVVEVEKLARFRHRSDEG 364

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPEDYEVEAGQSATFRCN 330
           L+I+ +   D+G + CFARN  G  Q S  L V     +IT  P D  V  G S    C 
Sbjct: 365 LQISGLVPDDTGMFQCFARNAAGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLACE 424

Query: 331 AVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
               P  + +I W +G   +   S   PRF      SL ++ +   D+G YTC A     
Sbjct: 425 TSGAP--RPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRG 482

Query: 389 FIEAQATLTVQVPL---EAPSNFTLIQVIDAKKAV-VSWNP-VSPQSL---RGHFRGYKV 440
             EA A L V       + P + ++I+   A     V+ +P V+ + +    G   G + 
Sbjct: 483 VDEASADLVVWARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTIRYIWEKDGATLGIES 542

Query: 441 QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV--LAFNGAYNGPPSEIISFV 498
                 D  GS+       G+  T    + + A  N +R   L      + P   + +  
Sbjct: 543 NPRIRLDRNGSLHISQTWSGDIGTYTC-RVISAGGNDSRSAHLRVKQLPHAPEHPVATLS 601

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
           T E                 A  L W KP   N  L+ Y ++  S        LL  +  
Sbjct: 602 TVE---------------RRAINLTWTKPFDGNSPLIRYVLE-MSENNAPWTVLLASV-- 643

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV------PFKNPDNVEGRG 612
             DP  TS  + GL P+  Y+  L      G G  SK    V      P   P NV   G
Sbjct: 644 --DPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASG 701

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
            T  +++I W   PE   N     Y I +        +   ++ D   + L+L +   + 
Sbjct: 702 RTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLIIWT 761

Query: 673 PYEIKV 678
            YEI+V
Sbjct: 762 NYEIEV 767



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 128/578 (22%), Positives = 220/578 (38%), Gaps = 50/578 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY--GKSLIIKHVEFSDQGSYTCEV 106
           K V++ C   G P P   W  D   +   +++++  +   + L I  +   D G + C  
Sbjct: 324 KVVDIPCQAKGVPPPSITWYNDAAVVE-VEKLARFRHRSDEGLQISGLVPDDTGMFQCFA 382

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPI 166
            N  GE ++ +       AP  T  P      +  +V   C+ SG P P I W    + +
Sbjct: 383 RNAAGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERIL 442

Query: 167 SQAPPN-PR-RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           +      PR   +    + I     SD G Y C ATNS G       + V A    IT+ 
Sbjct: 443 ASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWART-RITKP 501

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDVAF 279
           P+D+  + G    + C V   P+  + +I  +   T G     R  +   G L I+    
Sbjct: 502 PQDQSVIKGTQASMVCGVTHDPRVTIRYIWEKDGATLGIESNPRIRLDRNGSLHISQTWS 561

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------EDYEVEAGQSATFRCNAV 332
            D G YTC   +  G    S  L VK+  H  + P       E   +    +  F  N+ 
Sbjct: 562 GDIGTYTCRVISAGGNDSRSAHLRVKQLPHAPEHPVATLSTVERRAINLTWTKPFDGNS- 620

Query: 333 SDPSLKLSIVWLRGSEP---IDFESEPR--------FVQSNDYSLTVTKSSELDSGQYTC 381
             P ++  +     + P   +    +P+         V +  Y   +   +++  GQ++ 
Sbjct: 621 --PLIRYVLEMSENNAPWTVLLASVDPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFS- 677

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
              TE      + +L  + P   P N       + +  ++ W P       G  +GY ++
Sbjct: 678 -KDTE------RVSLPEEPPTAPPQNVIASGRTN-QSIMIQWQPPPESHQNGILKGYIIR 729

Query: 442 TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
                   G   + I +  +     ++  +  +     V A+N A  G  S  ++  T +
Sbjct: 730 YCLAGLPVGYQFKNITD-ADVNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQ 788

Query: 502 GV----PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK-IKYQSVKGTKVGPLLERL 556
           GV    PG V + EA    +  F      P+  NG+  GYK I ++  +  +V  +  R 
Sbjct: 789 GVPTVLPGNVHT-EATNSTTIRFTWNATSPQFINGINQGYKLIAWEPEQEEEVTMVTAR- 846

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           P   D +     ++GL+  T+Y   +  +T  GDG  S
Sbjct: 847 PNFQD-SIHVGFVSGLKKFTEYFTSVLCFTTPGDGPRS 883



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N  ++    A +  V+  P    S  G  +GYK+  W  + G  + R   +  
Sbjct: 1622 VPTAAPRN-VVVHGTTATQLDVTSEPPPLDSQNGDIQGYKIYFWEAQRGNLTERVKTLFL 1680

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E++  ++      +     V AFN A +GP S      T +  P    S++   L +++
Sbjct: 1681 AENSV-KLKNLTGYTAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSAPSSVKFSELTTTS 1739

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNG+L GY++ Y+
Sbjct: 1740 VNVSWEAPQFPNGILEGYRLVYE 1762



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 81/351 (23%), Positives = 142/351 (40%), Gaps = 50/351 (14%)

Query: 379  YTCRAQTELDFIEAQATLTV----QVPLEAPSNFTLIQV-IDAKKAVVSWNP----VSPQ 429
            +   AQT   + EA   L V    +V  + PS   + Q  + A+  ++SW P    +SP 
Sbjct: 1373 FRITAQTRKGWGEAAEALVVTTEKRVRPQPPSRPMVQQEDVRARSVLLSWEPGSDGLSP- 1431

Query: 430  SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
                  R Y +QT     G  ++    V+   S+   VD+  P +    RV A N   + 
Sbjct: 1432 -----VRYYTIQTRELPSGRWALHSASVSHNTSSFI-VDRLKPFTSYKFRVKATNDIGDS 1485

Query: 490  PPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQ 542
              SE    +T     P+  P     L   P  +++  ++W  P  ++ NG+L+G++I+Y+
Sbjct: 1486 EFSEESESLTTLQAAPDEAPTI---LSVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYR 1542

Query: 543  ----------SVKG--------TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAG 584
                      +++G         ++ P+   +  +S P+ T  +L  L    +Y I ++ 
Sbjct: 1543 ELLYEGLRGFTIRGINNPGATWAELTPMYS-MRNLSRPSLTQYELDNLNKHRRYEIRMSV 1601

Query: 585  YTKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI 639
            Y   G+G  S  + +F    VP   P NV   G+T   L ++    P    N     Y+I
Sbjct: 1602 YNAVGEGPSSPPQEVFVGEAVPTAAPRNVVVHGTTATQLDVTSEPPPLDSQNGDIQGYKI 1661

Query: 640  FWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGS 690
            ++     G    +   L   ++ + L N   +  Y + V       DG  S
Sbjct: 1662 YFWEAQRGNLTERVKTLFLAENSVKLKNLTGYTAYMVSVAAFNAAGDGPRS 1712



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 82/199 (41%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ V      G   GYKV  + EKD +      +   
Sbjct: 1198 VPSSGPTNVSALATTSSS-MLVRWSEVPEADRNGLVLGYKVM-YKEKDSDAQPXFWLGEG 1255

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1256 NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 1315

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P + Y
Sbjct: 1316 SVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVL----APSARQYTATGLKPESVY 1371

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1372 LFRITAQTRKGWGEAAEAL 1390



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 104/248 (41%), Gaps = 34/248 (13%)

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
            + P+S+   FR GY  +T    W  +   G + E    L++    N+ ++ + EV    P
Sbjct: 1004 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNP 1063

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 1064 FTYYSFRMHQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLCTA---SETSLWLRWMPL 1120

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY    G   G  L  +  + D       +  LE  T+YRI + 
Sbjct: 1121 PEMEYNGNPESVGYKIKYSRSDGH--GKTLSHV--VQDRVERGYAIKDLEEWTEYRIQVQ 1176

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +  +     S+ +       VP   P NV    +T +++++ W+ +PE + N     Y+
Sbjct: 1177 AFNASRSWPWSQMVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYK 1236

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1237 VMYKEKDS 1244



 Score = 43.9 bits (102), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 4/73 (5%)

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
           TE  + +  ++G  +VLTC   G+   E  W+HN +ELT  ++++       IT +    
Sbjct: 30  TEPVRTQVHLEGNRLVLTCMAEGSWPLEFKWLHNNRELT--KFSL--EYRYMITSLDRTH 85

Query: 282 SGEYTCFARNKLG 294
           +G Y C  RN++G
Sbjct: 86  AGFYRCIVRNRMG 98


>gi|410951587|ref|XP_003982476.1| PREDICTED: LOW QUALITY PROTEIN: neural cell adhesion molecule
           L1-like protein-like [Felis catus]
          Length = 1208

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 185/713 (25%), Positives = 308/713 (43%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+   + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 252 LKGDTLLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYGKTLKIENVSYRDRGNYRCT 310

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            +N +G + S+   + V   P +T +P+    +   +    C+A G PEP + W  NG P
Sbjct: 311 ANNFLG-STSHDFHVVVEEPPRWTKKPQSGVYSTGSSGILLCEAEGEPEPTLKWRVNGSP 369

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEA 224
           I + P      V P  I+  NL+ + T  Y C A+N  G +  +  ++V+   P I TE 
Sbjct: 370 IDKNP-FAGDVVSPTEISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQTED 428

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            ++  TV G +  L C  F +P+  V+W  +   K L G RY I E G L+I      D+
Sbjct: 429 EENYATVVGYSAFLHCEYFASPEAIVSWQKVDEAKPLEGRRYHIHENGTLQINKTTEDDA 488

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N  G    + +L ++  T +   P++  V    +    C +  DP LK  L 
Sbjct: 489 GSYSCWVENAKGKTAVTANLDIRNATKLQVSPKNPRVPKLHTLELHCESKCDPYLKHSLK 548

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y+C AQT LD +     +T+ 
Sbjct: 549 LSWSKNGEGFEINATEDGRIIIDGPNLTISNVTSEDQGIYSCSAQTALDSVADVTHVTIL 608

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W+  +  + R     Y V+    K+  G   EL   +
Sbjct: 609 DVPDPPENLHLSERQN-RSVRLTWDAGNDHNSR--ISEYIVEFEGNKEEPGRWEELTRVQ 665

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 666 GKETTALL-SLAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQP 724

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 725 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EXEEETVTNHTLRVMTPT 775

Query: 576 T--KYRIHLAGYTKAGDGAESK-YLFYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +      G G E +  + Y     PD    + G     + LV +SW+ +P+ 
Sbjct: 776 VYAPYDVQVQAVNHLGSGPEPQSVILYSGEDYPDTAPVIHGVDVINSTLVKVSWSTIPKD 835

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ +++ ++ +   
Sbjct: 836 RVHGHLKGYQINW--------WKTKSLLDGRT-----------HPKEVNILR-FSGQRNY 875

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
           G +  L            D F   S+    VLA+N    GP SE   F TPEG
Sbjct: 876 GMVPSL------------DAF---SEFHLTVLAYNSKGAGPESEPYIFQTPEG 913



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 135/574 (23%), Positives = 231/574 (40%), Gaps = 49/574 (8%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
            L C +  +P     W K         R    +   +L I      D GSY+C V N  G+
Sbjct: 442  LHCEYFASPEAIVSWQKVDEAKPLEGRRYHIHENGTLQINKTTEDDAGSYSCWVENAKGK 501

Query: 113  AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP----EPEIHWVHNGKPISQ 168
              + + +L +  A    V P+     +  T+   C++   P      ++ W  NG+    
Sbjct: 502  T-AVTANLDIRNATKLQVSPKNPRVPKLHTLELHCESKCDPYLKHSLKLSWSKNGEGFEI 560

Query: 169  APPNPRRKV--GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
                  R +  GPN +TI N+   D G Y C+A  +L  V    +V +L    ++ + P+
Sbjct: 561  NATEDGRIIIDGPN-LTISNVTSEDQGIYSCSAQTALDSVADVTHVTIL----DVPDPPE 615

Query: 227  DEYTVD--GKTVVLTCRVFGAPKPE-----VNWIHNQKELTGGRYTILETGDLKITDVAF 279
            + +  +   ++V LT               V +  N++E   GR+  L     K T    
Sbjct: 616  NLHLSERQNRSVRLTWDAGNDHNSRISEYIVEFEGNKEE--PGRWEELTRVQGKETTALL 673

Query: 280  ADSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSAT------- 326
            + +     ++   A N++G +Q S      E         P++  V+A Q          
Sbjct: 674  SLAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEP 733

Query: 327  FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
             +    + P L+  + W     P++ E E       +++L V   +         +A   
Sbjct: 734  LKSMEQNGPGLEYRVTWKPQGAPVEXEEE----TVTNHTLRVMTPTVYAPYDVQVQAVNH 789

Query: 387  LDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW 443
            L       ++ +    + P    +I    VI++    VSW+ +    + GH +GY++  W
Sbjct: 790  LGSGPEPQSVILYSGEDYPDTAPVIHGVDVINSTLVKVSWSTIPKDRVHGHLKGYQINWW 849

Query: 444  TEK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
              K   DG    +E+ + +  G+     V      S+    VLA+N    GP SE   F 
Sbjct: 850  KTKSLLDGRTHPKEVNILRFSGQRNYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQ 909

Query: 499  TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERLP 557
            TPEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T ++G L +   
Sbjct: 910  TPEGVPEQPAFLKIIKVDKDTATLTWGLPKKLNGNLTGYLLQYQIINDTYELGELNDI-- 967

Query: 558  YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             I+ P+  S +L+ L  +TKY+ +L   T  G G
Sbjct: 968  NITTPSKPSWRLSNLNSTTKYKFYLRACTSKGCG 1001



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 133/326 (40%), Gaps = 32/326 (9%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P  +W+KD    + SD   I   N G   I      S  QG Y C  SN
Sbjct: 52  QIECEAKGNPEPTFMWTKDDKTFDLSDSRIIVSNNSGTFKIPNEGHISHFQGKYRCFASN 111

Query: 109 GVGEAKSYSIDLSVLAA----PYFTVEPEFINAAEEETVTFECK-ASGLPEPEIHWVH-N 162
            +G A S  I+  V +     P   ++P  +   E + +   C    GLP   I+W++  
Sbjct: 112 KLGVAMSEEIEFIVPSKCSKIPKRKIDP--LEVEEGDPIVLPCNPPKGLPPLHIYWMNIE 169

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-NSLGYVYKDVYVNVLAHA-- 218
            + I Q       + G   +   N+ + D+ N Y C A    L  + + + + +  ++  
Sbjct: 170 LEHIEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSN 227

Query: 219 ------PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
                 P +   P +  +      + G T++L C   G P P+V+W     +L  GR T 
Sbjct: 228 SIKQRKPRLLLPPSESGSASSVTILKGDTLLLECFAEGLPTPQVDWNKIGGDLPKGRETK 287

Query: 267 LETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
              G  LKI +V++ D G Y C A N LG+      + V+E    T +P+      G S 
Sbjct: 288 ENYGKTLKIENVSYRDRGNYRCTANNFLGSTSHDFHVVVEEPPRWTKKPQSGVYSTGSSG 347

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPID 351
              C A  +P   L   W     PID
Sbjct: 348 ILLCEAEGEPEPTLK--WRVNGSPID 371



 Score = 44.3 bits (103), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 107/286 (37%), Gaps = 28/286 (9%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGK--PISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +E    EC+A G PEP   W  + K   +S +        G  +I  E       G Y C
Sbjct: 48  DEYFQIECEAKGNPEPTFMWTKDDKTFDLSDSRIIVSNNSGTFKIPNEGHISHFQGKYRC 107

Query: 198 NATNSLGY-VYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIH 254
            A+N LG  + +++   V +   +I +   D   V +G  +VL C    G P   + W++
Sbjct: 108 FASNKLGVAMSEEIEFIVPSKCSKIPKRKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMN 167

Query: 255 NQKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHT 308
            + E      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV    
Sbjct: 168 IELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSN 227

Query: 309 HITDQ-------------PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE 355
            I  +                  +  G +    C A   P+ ++    + G  P   E++
Sbjct: 228 SIKQRKPRLLLPPSESGSASSVTILKGDTLLLECFAEGLPTPQVDWNKIGGDLPKGRETK 287

Query: 356 PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
             + +    +L +   S  D G Y C A   L        + V+ P
Sbjct: 288 ENYGK----TLKIENVSYRDRGNYRCTANNFLGSTSHDFHVVVEEP 329


>gi|126342128|ref|XP_001378160.1| PREDICTED: neural cell adhesion molecule L1 [Monodelphis domestica]
          Length = 1344

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 140/470 (29%), Positives = 210/470 (44%), Gaps = 20/470 (4%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VALR + + L CI  G P P   WS     +  + R++  N+ K+L +  VE  D G Y 
Sbjct: 341 VALRGQPLVLECIAEGFPTPTIKWSYPSNQMQ-AGRVTYQNFNKTLRLVRVEEEDDGEYR 399

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ +   ++V AAPY+  EPE +  A  ET    C+  G P P + W  NG
Sbjct: 400 CWAENTLGSAQ-HVYYVTVEAAPYWLQEPESLVLAPGETARLNCQVQGRPRPMVTWRING 458

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +     + + +V    + + N++ +DT    C A N  G +  + Y++V+    +I  
Sbjct: 459 VSLENLTRDDKLRVQGGALILSNVQPNDTMVTQCEARNKHGLLLANAYISVVQLPTKILT 518

Query: 224 APKDEYT-VDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
                Y  V G T  L C  FG P P + W++  +   L   R+     G L I D+   
Sbjct: 519 PDNKTYREVQGSTAYLLCNAFGVPMPSIQWLNRDQATVLQDERFVPYANGTLAIRDLQTN 578

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N          L VKE T I   PED  V+ G +  F C    DPSL + 
Sbjct: 579 DTGSYFCQADNDQNRVSIKAHLQVKEATQIKKGPEDRTVKKGSNVNFPCLVSFDPSLNIQ 638

Query: 341 IVWLRGSEPI-DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           I W    + I DF  E +++   +  LT+      D G Y+C A+T LD +E +AT+ V 
Sbjct: 639 IDWYWNDQNIKDFYKEDKYLIKEE-ELTIISLDYADQGNYSCVAKTALDSVEKKATVLV- 696

Query: 400 VPLEAPSNFTLIQVIDAKKAVV--SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIV 457
             + +P     +++   K   V  SW+P    +       Y ++        G+   L  
Sbjct: 697 --VGSPGPVGQLELYKQKDFHVQLSWSPAEEHN--SPIEKYNIEFEDRTMEPGTWYPLAT 752

Query: 458 NKGESTTTEVDKFVPASKNFARVLA---FNGAYNGPPSEIISFVTPEGVP 504
             G  T+T + K  P      RV+A   F  +   P SE   F+TP+ VP
Sbjct: 753 VPGNETSTRL-KLSPFVHYNFRVIANNKFGASEPSPDSE--PFITPKSVP 799



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 150/566 (26%), Positives = 238/566 (42%), Gaps = 59/566 (10%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS------ 190
           A   + +  EC A G P P I W +           P  ++   R+T +N  K+      
Sbjct: 342 ALRGQPLVLECIAEGFPTPTIKWSY-----------PSNQMQAGRVTYQNFNKTLRLVRV 390

Query: 191 ---DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPK 247
              D G Y C A N+LG      YV V A AP   + P+      G+T  L C+V G P+
Sbjct: 391 EEEDDGEYRCWAENTLGSAQHVYYVTVEA-APYWLQEPESLVLAPGETARLNCQVQGRPR 449

Query: 248 PEVNWIHN---QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTV 304
           P V W  N    + LT      ++ G L +++V   D+    C ARNK G    +  ++V
Sbjct: 450 PMVTWRINGVSLENLTRDDKLRVQGGALILSNVQPNDTMVTQCEARNKHGLLLANAYISV 509

Query: 305 KEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
            +       P++  Y    G +A   CNA   P    SI WL   +    + E RFV   
Sbjct: 510 VQLPTKILTPDNKTYREVQGSTAYLLCNAFGVP--MPSIQWLNRDQATVLQDE-RFVPYA 566

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAK-K 418
           + +L +      D+G Y C+A  + + +  +A L V+   +    P + T+ +  +    
Sbjct: 567 NGTLAIRDLQTNDTGSYFCQADNDQNRVSIKAHLQVKEATQIKKGPEDRTVKKGSNVNFP 626

Query: 419 AVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFA 478
            +VS++P     +  ++    ++ + ++D      + ++ + E T   +D     + +  
Sbjct: 627 CLVSFDPSLNIQIDWYWNDQNIKDFYKED------KYLIKEEELTIISLDYADQGNYSCV 680

Query: 479 RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
              A +        E  + V   G PG V  LE          L W   E+ N  +  Y 
Sbjct: 681 AKTALDSV------EKKATVLVVGSPGPVGQLELYKQKDFHVQLSWSPAEEHNSPIEKYN 734

Query: 539 IKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG------DGA 592
           I+++  +  + G      P  + P   ++    L P   Y   +    K G      D  
Sbjct: 735 IEFED-RTMEPGTWY---PLATVPGNETSTRLKLSPFVHYNFRVIANNKFGASEPSPDSE 790

Query: 593 ESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
                  VP KNP NV+G G+  NN+VI+W  +  I+ N P  KYR+ WR+ N  E W +
Sbjct: 791 PFITPKSVPEKNPTNVKGEGNETNNMVITWKPLKWIDWNGPELKYRVQWRQKNESE-WRE 849

Query: 653 DDVLDWRQSELVLANQPTFQPYEIKV 678
             V   R S+ V++N PTF PYEIKV
Sbjct: 850 VMV---RASKYVVSNTPTFVPYEIKV 872



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 147/633 (23%), Positives = 251/633 (39%), Gaps = 69/633 (10%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY-GKSLIIKHVEFSDQGSYTCEVSN--G 109
            L C   G P P   W  +GV +    R  +    G +LI+ +V+ +D     CE  N  G
Sbjct: 440  LNCQVQGRPRPMVTWRINGVSLENLTRDDKLRVQGGALILSNVQPNDTMVTQCEARNKHG 499

Query: 110  VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEE--TVTFECKASGLPEPEIHWVHNGKPIS 167
            +  A +Y   +SV+  P   + P+     E +  T    C A G+P P I W++      
Sbjct: 500  LLLANAY---ISVVQLPTKILTPDNKTYREVQGSTAYLLCNAFGVPMPSIQWLNR----D 552

Query: 168  QAPPNPRRKVGP---NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            QA      +  P     + I +L+ +DTG+Y C A N    V    ++ V   A +I + 
Sbjct: 553  QATVLQDERFVPYANGTLAIRDLQTNDTGSYFCQADNDQNRVSIKAHLQV-KEATQIKKG 611

Query: 225  PKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKELTG----GRYTILETGDLKITDVA 278
            P+D     G  V   C V   P    +++W  N + +       +Y I E  +L I  + 
Sbjct: 612  PEDRTVKKGSNVNFPCLVSFDPSLNIQIDWYWNDQNIKDFYKEDKYLIKEE-ELTIISLD 670

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE-----DYEVEAGQSATFRCNA-- 331
            +AD G Y+C A+  L + +   ++ V        Q E     D+ V+   S     N+  
Sbjct: 671  YADQGNYSCVAKTALDSVEKKATVLVVGSPGPVGQLELYKQKDFHVQLSWSPAEEHNSPI 730

Query: 332  ----------VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTC 381
                        +P     +  + G+E         FV    Y+  V  +++  + + + 
Sbjct: 731  EKYNIEFEDRTMEPGTWYPLATVPGNETSTRLKLSPFVH---YNFRVIANNKFGASEPSP 787

Query: 382  RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
             ++    FI  ++     VP + P+N    +  +    V++W P+      G    Y+VQ
Sbjct: 788  DSEP---FITPKS-----VPEKNPTNVKG-EGNETNNMVITWKPLKWIDWNGPELKYRVQ 838

Query: 442  TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
             W +K+ E   RE++V   +   +    FVP      +V A N    GP   I+   + E
Sbjct: 839  -WRQKN-ESEWREVMVRASKYVVSNTPTFVPYE---IKVQAINEVGKGPDPHIVIGYSGE 893

Query: 502  GVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
             VP  +  +    L ++   +KW  V   +  G L GY++ Y  V              I
Sbjct: 894  DVPQAIPIVAIELLNATTVRIKWEPVDLNEVRGHLRGYRVTYWWVNSRWSRSKRHTPKTI 953

Query: 560  SD--PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEGRG 612
             D   +   A L  L P + Y +H+  +     G  S+ + +     VP + P ++  R 
Sbjct: 954  IDKPASAMEAVLPDLRPYSIYSVHVQVFNSRSLGPPSETIKFETEEGVPDR-PQSLNLRR 1012

Query: 613  STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
             +   L +SW   P +  N     Y++ +R  N
Sbjct: 1013 LSDTALQLSW--RPPLNPNGELKGYQLIYRPFN 1043



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 85/187 (45%), Gaps = 10/187 (5%)

Query: 411  IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWT-----EKDGEGSIRELIVNKGESTTT 465
            I++++A    + W PV    +RGH RGY+V  W       +    + + +I     +   
Sbjct: 904  IELLNATTVRIKWEPVDLNEVRGHLRGYRVTYWWVNSRWSRSKRHTPKTIIDKPASAMEA 963

Query: 466  EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWV 525
             +    P S     V  FN    GPPSE I F T EGVP   QSL    L  +A  L W 
Sbjct: 964  VLPDLRPYSIYSVHVQVFNSRSLGPPSETIKFETEEGVPDRPQSLNLRRLSDTALQLSWR 1023

Query: 526  KPEQPNGVLMGYKIKYQSV-KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAG 584
             P  PNG L GY++ Y+   +  +   + E LP    PTT    L+ L+P T YR  L  
Sbjct: 1024 PPLNPNGELKGYQLIYRPFNQEPEENEMTEFLP----PTTLMFNLSDLKPQTLYRFQLRA 1079

Query: 585  YTKAGDG 591
             TK G G
Sbjct: 1080 TTKVGPG 1086



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 98/401 (24%), Positives = 173/401 (43%), Gaps = 34/401 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRI---SQGNYGKSLIIKHVE-F 96
           +K V      + L C   G P  Q  W+K+ +  +P   +   +  N G  +I  +   F
Sbjct: 133 EKLVVFPTDDIVLKCEASGKPEVQFRWTKENIHFSPEKELGATTHINSGSFIITGNTSNF 192

Query: 97  SD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK--ASG 151
           +   QG+Y C  SN +G A S+ I L    AP +  E  +     E ++V   C   AS 
Sbjct: 193 AQRYQGTYRCFASNRLGTAMSHEIHLVAEGAPKWPKEKVQPFEVEEGQSVVLPCNPPASA 252

Query: 152 LPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNATNSLG---YV 206
           + +P I+W+++   I     + R  +G N  +   N+  +D+  +Y C+A + LG    +
Sbjct: 253 V-QPRIYWMNSR--IFHIAQDERVTMGQNGNLYFANVLTNDSHSDYICHA-HFLGARTIM 308

Query: 207 YK---DVYV----NVLAHAPEIT---EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
            K   D+ V    N++   P +            + G+ +VL C   G P P + W +  
Sbjct: 309 QKEPIDLRVKPTNNMIYRRPRLLLPEGLTSRLVALRGQPLVLECIAEGFPTPTIKWSYPS 368

Query: 257 KELTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE 315
            ++  GR T       L++  V   D GEY C+A N LG+AQ    +TV+   +   +PE
Sbjct: 369 NQMQAGRVTYQNFNKTLRLVRVEEEDDGEYRCWAENTLGSAQHVYYVTVEAAPYWLQEPE 428

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
              +  G++A   C     P  +  + W      ++  +    ++    +L ++     D
Sbjct: 429 SLVLAPGETARLNCQVQGRP--RPMVTWRINGVSLENLTRDDKLRVQGGALILSNVQPND 486

Query: 376 SGQYTCRAQTELDFIEAQATLT-VQVP--LEAPSNFTLIQV 413
           +    C A+ +   + A A ++ VQ+P  +  P N T  +V
Sbjct: 487 TMVTQCEARNKHGLLLANAYISVVQLPTKILTPDNKTYREV 527



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 72/182 (39%), Gaps = 14/182 (7%)

Query: 215 LAHAPEITE-APKDEYTVDGKTVVLTCRVFGAPKPEVNW----IHNQKELTGGRYTILET 269
           +   P ITE +P+         +VL C   G P+ +  W    IH   E   G  T + +
Sbjct: 121 VMQPPNITEQSPEKLVVFPTDDIVLKCEASGKPEVQFRWTKENIHFSPEKELGATTHINS 180

Query: 270 GDLKIT----DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQ 323
           G   IT    + A    G Y CFA N+LGTA       V E       ++ + +EVE GQ
Sbjct: 181 GSFIITGNTSNFAQRYQGTYRCFASNRLGTAMSHEIHLVAEGAPKWPKEKVQPFEVEEGQ 240

Query: 324 SATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS-GQYTCR 382
           S    CN  +  +++  I W+  S       + R     + +L        DS   Y C 
Sbjct: 241 SVVLPCNPPAS-AVQPRIYWM-NSRIFHIAQDERVTMGQNGNLYFANVLTNDSHSDYICH 298

Query: 383 AQ 384
           A 
Sbjct: 299 AH 300



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 86/364 (23%), Positives = 144/364 (39%), Gaps = 70/364 (19%)

Query: 120 LSVLAAPYFTVE-PEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           + V+  P  T + PE +     + +  +C+ASG PE +  W       S     P +++G
Sbjct: 119 MEVMQPPNITEQSPEKLVVFPTDDIVLKCEASGKPEVQFRWTKENIHFS-----PEKELG 173

Query: 179 PNR--------IT--IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
                      IT    N  +   G Y C A+N LG         V   AP+  +     
Sbjct: 174 ATTHINSGSFIITGNTSNFAQRYQGTYRCFASNRLGTAMSHEIHLVAEGAPKWPKEKVQP 233

Query: 229 YTV-DGKTVVLTCR-VFGAPKPEVNWIHNQ--KELTGGRYTILETGDLKITDVAFADS-G 283
           + V +G++VVL C     A +P + W++++        R T+ + G+L   +V   DS  
Sbjct: 234 FEVEEGQSVVLPCNPPASAVQPRIYWMNSRIFHIAQDERVTMGQNGNLYFANVLTNDSHS 293

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS-LKLSIV 342
           +Y C A + LG             T +  +P D  V+   +  +R   +  P  L   +V
Sbjct: 294 DYICHA-HFLGA-----------RTIMQKEPIDLRVKPTNNMIYRRPRLLLPEGLTSRLV 341

Query: 343 WLRGSEPIDFE-------------SEPR--------FVQSNDYSLTVTKSSELDSGQYTC 381
            LRG +P+  E             S P           Q+ + +L + +  E D G+Y C
Sbjct: 342 ALRG-QPLVLECIAEGFPTPTIKWSYPSNQMQAGRVTYQNFNKTLRLVRVEEEDDGEYRC 400

Query: 382 RAQTELDFIEAQATLTVQVP---LEAPSNFTL---------IQVIDAKKAVVSW--NPVS 427
            A+  L   +    +TV+     L+ P +  L          QV    + +V+W  N VS
Sbjct: 401 WAENTLGSAQHVYYVTVEAAPYWLQEPESLVLAPGETARLNCQVQGRPRPMVTWRINGVS 460

Query: 428 PQSL 431
            ++L
Sbjct: 461 LENL 464


>gi|417406036|gb|JAA49700.1| Putative neural cell adhesion molecule l1-like protein isoform 3
           [Desmodus rotundus]
          Length = 1170

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 176/713 (24%), Positives = 304/713 (42%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           LR   + L C   G P PQ  W K G  + P  R ++ NYGK L I+ V   D+G Y C 
Sbjct: 268 LRGDTLLLECFAEGLPTPQIEWKKMGGDL-PKGRETKENYGKMLKIEKVSDEDRGRYRCT 326

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            +N +G A ++   ++V   P +  +P+    +   +V   C+A G P+P I W  NG P
Sbjct: 327 ATNSLGSA-THDFHVTVEEPPRWVKKPQSGVYSTGTSVILLCEAEGEPKPTIRWRVNGLP 385

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEA 224
           I + P      + P  ++  NL+ + +  Y C A+N+ G +     ++V+  +P I T+ 
Sbjct: 386 IEENP-FAGDVIFPGEVSFTNLQPNHSAVYQCEASNAHGTILATANIDVIDISPLIQTDD 444

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ--KELTGGRYTILETGDLKITDVAFADS 282
            +D   V G +V L C  F +P+  V+W+  +  + + G RY + + G L+++     D+
Sbjct: 445 GEDYAAVVGSSVSLHCDFFASPQAVVSWLRVEELRPIEGPRYRVFDNGTLQVSRATEEDA 504

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL--KLS 340
           G YTC+  N  G    + SL +++ T +   PE+  V    +   RC +  DP L   L+
Sbjct: 505 GSYTCWVENAKGKTAVTASLDIRKATTVRVSPENPRVPRSHTLELRCASRCDPHLGPSLT 564

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  + +    +E   V  +   LT++  +  D G Y+C A+T LD +  +  +TV 
Sbjct: 565 LAWSKDGDALQTNGTEDGRVVLDGARLTISNVTPEDQGVYSCAARTTLDSVADETRVTVL 624

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W+  +      +   Y V+   +K+  G    L V  
Sbjct: 625 DVPDPPENLRLSERQN-RSVRLAWD--AGDDHNSNITEYVVEFEGDKEAPGRWATLTVVS 681

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           GE T+  +    P  +   RV+A N      PS       TP   P    Q++       
Sbjct: 682 GEGTSVLL-PLAPYVRYRFRVVAVNEVGRSRPSRPSDHHETPPAAPDKNPQNIRVQASQP 740

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +KP + NG  + Y++ ++  +G  V           + T     L  + P+
Sbjct: 741 KEMIIKWEPLKPMEQNGPGLEYRVAWRP-QGAPV--------EWEEETVREHSLRVMTPA 791

Query: 576 --TKYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G E + +  Y     PD    ++G     + LV ++W+++P+ 
Sbjct: 792 VYAPYDVQVQAVNRLGAGPEPQSVTLYSGEDYPDAAPVIQGVDVVNSTLVRVTWSSVPKD 851

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y++ W        W    +LD R                            E
Sbjct: 852 RVHGQLKGYQVTW--------WKTRSLLDGRP------------------------LPKE 879

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
            S+      +G      ++ F   S+    VLA+N    GP SE  +F TPEG
Sbjct: 880 ASVLRFAGQRGSGMLPSLEAF---SEFRLTVLAYNSKGAGPESEPYTFQTPEG 929



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 135/585 (23%), Positives = 230/585 (39%), Gaps = 55/585 (9%)

Query: 45   ALRNKKVELFCIFGGTPLPQTIWSK--DGVPI-NPSDRISQGNYGKSLIIKHVEFSDQGS 101
            A+    V L C F  +P     W +  +  PI  P  R+       +L +      D GS
Sbjct: 450  AVVGSSVSLHCDFFASPQAVVSWLRVEELRPIEGPRYRVFDNG---TLQVSRATEEDAGS 506

Query: 102  YTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEP----EI 157
            YTC V N  G+  + +  L +  A    V PE        T+   C +   P       +
Sbjct: 507  YTCWVENAKGKT-AVTASLDIRKATTVRVSPENPRVPRSHTLELRCASRCDPHLGPSLTL 565

Query: 158  HWVHNGKPI-SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
             W  +G  + +    + R  +   R+TI N+   D G Y C A  +L  V  +  V VL 
Sbjct: 566  AWSKDGDALQTNGTEDGRVVLDGARLTISNVTPEDQGVYSCAARTTLDSVADETRVTVL- 624

Query: 217  HAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG-----GRYTILETGD 271
               ++ + P++    + +   +            N      E  G     GR+  L    
Sbjct: 625  ---DVPDPPENLRLSERQNRSVRLAWDAGDDHNSNITEYVVEFEGDKEAPGRWATLTVVS 681

Query: 272  LKITDVAFADSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSA 325
             + T V    +      +   A N++G ++ S      E         P++  V+A Q  
Sbjct: 682  GEGTSVLLPLAPYVRYRFRVVAVNEVGRSRPSRPSDHHETPPAAPDKNPQNIRVQASQPK 741

Query: 326  T-------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQ 378
                     +    + P L+  + W     P+++E E       ++SL V   +      
Sbjct: 742  EMIIKWEPLKPMEQNGPGLEYRVAWRPQGAPVEWEEE----TVREHSLRVMTPAVYAPYD 797

Query: 379  YTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV---VSWNPVSPQSLRGHF 435
               +A   L       ++T+    + P    +IQ +D   +    V+W+ V    + G  
Sbjct: 798  VQVQAVNRLGAGPEPQSVTLYSGEDYPDAAPVIQGVDVVNSTLVRVTWSSVPKDRVHGQL 857

Query: 436  RGYKVQTWTEK---DG-----EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            +GY+V  W  +   DG     E S+      +G      ++ F   S+    VLA+N   
Sbjct: 858  KGYQVTWWKTRSLLDGRPLPKEASVLRFAGQRGSGMLPSLEAF---SEFRLTVLAYNSKG 914

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
             GP SE  +F TPEGVP     L+ + +   A  + W  PE+ NG L G+ ++YQ++  T
Sbjct: 915  AGPESEPYTFQTPEGVPEQPAFLKVVKVDKDAAMVAWGLPEKLNGNLAGFLLQYQTINDT 974

Query: 548  -KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             ++G L +    ++ P   S +L+GL  +TKY++++   T  G G
Sbjct: 975  EEIGELHDI--NVTAPAKPSWRLSGLSANTKYKLYVRACTARGCG 1017



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 142/348 (40%), Gaps = 54/348 (15%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDGVPINPSD-RISQGNYGKSLIIK---HVEFSDQGSYT 103
           ++  ++ C   G P PQ  W+KD  P + SD R+   N   +  I    HV    QG Y 
Sbjct: 50  DEHFQVECEAKGNPEPQFTWTKDDKPFDLSDPRVIVANNSGTFRIPNEGHVSHF-QGRYR 108

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH 161
           C  SN +G A S  I+  V   P F  E  E +   E + V   CK  +GLP   I+W++
Sbjct: 109 CFASNRLGAAMSEEIEFIVPNIPKFPKEKIEPLEVEEGDPVMLSCKPPAGLPPLHIYWMN 168

Query: 162 -NGKPISQ------------------------------APPNPRRKVG--PNRITIENLR 188
              + I Q                              A P  R  V   P ++T+ +L+
Sbjct: 169 IELEHIEQDERVYMSQKGDLYFANVEEKDSRSDYCCFAAFPRLRTIVQKMPMKLTVHSLK 228

Query: 189 KSDTGNY---GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFG 244
           ++ +G+    G  A NS+      + +      P     P+   T+  G T++L C   G
Sbjct: 229 RNASGSSTEPGSQA-NSINQRMPRLLL------PAAESGPEHPVTILRGDTLLLECFAEG 281

Query: 245 APKPEVNWIHNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLT 303
            P P++ W     +L  GR T    G  LKI  V+  D G Y C A N LG+A     +T
Sbjct: 282 LPTPQIEWKKMGGDLPKGRETKENYGKMLKIEKVSDEDRGRYRCTATNSLGSATHDFHVT 341

Query: 304 VKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID 351
           V+E      +P+      G S    C A  +P  K +I W     PI+
Sbjct: 342 VEEPPRWVKKPQSGVYSTGTSVILLCEAEGEP--KPTIRWRVNGLPIE 387



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 128/330 (38%), Gaps = 47/330 (14%)

Query: 113 AKSYSIDLSVLAAPYFTVEPEFINAAE-EETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           A +  I LSV   P  T +   + A   +E    EC+A G PEP+  W  + KP   +  
Sbjct: 22  ATATEIPLSVPQVPTITKQSTVLVAFPFDEHFQVECEAKGNPEPQFTWTKDDKPFDLS-- 79

Query: 172 NPRRKVGPN----RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKD 227
           +PR  V  N    RI  E       G Y C A+N LG    +    ++ + P+  +   +
Sbjct: 80  DPRVIVANNSGTFRIPNEGHVSHFQGRYRCFASNRLGAAMSEEIEFIVPNIPKFPKEKIE 139

Query: 228 EYTV-DGKTVVLTCR-VFGAPKPEVNWIHNQKELT--GGRYTILETGDLKITDVAFADS- 282
              V +G  V+L+C+   G P   + W++ + E      R  + + GDL   +V   DS 
Sbjct: 140 PLEVEEGDPVMLSCKPPAGLPPLHIYWMNIELEHIEQDERVYMSQKGDLYFANVEEKDSR 199

Query: 283 GEYTCFA----------------------RNKLGTAQGSGSLTVKEHTHI--------TD 312
            +Y CFA                      RN  G++   GS     +  +          
Sbjct: 200 SDYCCFAAFPRLRTIVQKMPMKLTVHSLKRNASGSSTEPGSQANSINQRMPRLLLPAAES 259

Query: 313 QPED-YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKS 371
            PE    +  G +    C A   P+ ++    + G  P   E++  + +     L + K 
Sbjct: 260 GPEHPVTILRGDTLLLECFAEGLPTPQIEWKKMGGDLPKGRETKENYGK----MLKIEKV 315

Query: 372 SELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           S+ D G+Y C A   L        +TV+ P
Sbjct: 316 SDEDRGRYRCTATNSLGSATHDFHVTVEEP 345


>gi|34782959|gb|AAH08124.2| NFASC protein, partial [Homo sapiens]
          Length = 294

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 152/287 (52%), Gaps = 8/287 (2%)

Query: 116 YSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           ++I + V AAPY+  EP+ +  A  E     C+A+G P+P + W+ NG+P+  APPNP R
Sbjct: 2   HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNR 61

Query: 176 KVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY--TVDG 233
           +V  + I   + + S    Y CN +N  GY+  + +V+VL   P +  +P+++    +  
Sbjct: 62  EVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRML-SPRNQLIRVILY 120

Query: 234 KTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFADSGEYTCFARN 291
               L C  FG+P P + W  N +   L GG Y + E G L+I  +   D G YTC A N
Sbjct: 121 NRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATN 180

Query: 292 KLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID 351
            LG A+    L VK+ T I   PED     G +    C    DPSLKL++ WL+  EP+ 
Sbjct: 181 ILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLY 240

Query: 352 FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             +    ++  D SLT+   +E D G YTC A TELD   A+A LTV
Sbjct: 241 IGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTV 284



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 109/263 (41%), Gaps = 18/263 (6%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
            L C   G P P   W  +G P+     NP+  ++    G ++I +  + S +  Y C  
Sbjct: 30  RLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVA----GDTIIFRDTQISSRAVYQCNT 85

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           SN  G   + +  +SVL  P   + P  + I          +C   G P P + W  NG+
Sbjct: 86  SNEHGYLLANAF-VSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ 144

Query: 165 PISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +    N    V  N  + I+ +RK D G Y C ATN LG     V + V      I  
Sbjct: 145 GSNLDGGN--YHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYR 201

Query: 224 APKDEYTVDGKTVVLTCRVFGAP--KPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
            P+D+    G TV L CRV   P  K  V+W+ + + L  G     E   L I  VA  D
Sbjct: 202 MPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERD 261

Query: 282 SGEYTCFARNKLGTAQGSGSLTV 304
            G YTC A  +L        LTV
Sbjct: 262 QGSYTCVASTELDQDLAKAYLTV 284



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 19/211 (9%)

Query: 15  ILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI 74
           +L N   + +       +P+ Q +     V L N+   L C F G+P+P   W K+G   
Sbjct: 92  LLANAFVSVLDVPPRMLSPRNQLI----RVILYNR-TRLDCPFFGSPIPTLRWFKNGQGS 146

Query: 75  NPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV 130
           N    +  GNY      SL IK +   DQG YTC  +N +G+A++  + L V        
Sbjct: 147 N----LDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAEN-QVRLEVKDPTRIYR 201

Query: 131 EPEFINAAEEETVTFECKASGLPEPE--IHWVHNGKPISQAPPNPRRKVGPNRITIENLR 188
            PE   A    TV  EC+    P  +  + W+ + +P+       R K   + +TI  + 
Sbjct: 202 MPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIG---NRMKKEDDSLTIFGVA 258

Query: 189 KSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
           + D G+Y C A+  L       Y+ VL + P
Sbjct: 259 ERDQGSYTCVASTELDQDLAKAYLTVLGNCP 289



 Score = 38.9 bits (89), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 69/189 (36%), Gaps = 8/189 (4%)

Query: 218 APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDL 272
           AP   + PK+     G+   L CR  G PKP V W+ N + L        R    +T  +
Sbjct: 11  APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--I 68

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV 332
              D   +    Y C   N+ G    +  ++V +       P +  +        R +  
Sbjct: 69  IFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCP 128

Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
              S   ++ W +  +  + +     V  N  SL +    + D G YTC A   L   E 
Sbjct: 129 FFGSPIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAEN 187

Query: 393 QATLTVQVP 401
           Q  L V+ P
Sbjct: 188 QVRLEVKDP 196


>gi|338729750|ref|XP_001491834.3| PREDICTED: LOW QUALITY PROTEIN: neural cell adhesion molecule
           L1-like [Equus caballus]
          Length = 1284

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 143/479 (29%), Positives = 216/479 (45%), Gaps = 35/479 (7%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ PSDR++  N+ K+L + +V   D G Y 
Sbjct: 280 VALQGQPLILECIAEGFPTPTIKWLRPSGPM-PSDRVTYQNHNKTLQLLNVGEEDDGEYR 338

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G  + ++  ++V AAPY+  +P+       ETV  +C+  G P+PE+ W  NG
Sbjct: 339 CLAENSLGSDR-HAYYVTVEAAPYWLQKPQSHLYGPGETVRLDCQVQGRPQPEVTWRING 397

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 398 IPVEELAKDQKYRIQRGALILSNIQPSDTMVTQCEARNRHGVLLANAYIYVVQLPAKILT 457

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
              + Y  V+G T  L C+ FGAP P V W+  + +  L   R+     G L I D+   
Sbjct: 458 PDNETYMAVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTDGTLGIRDLQAN 517

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 518 DTGHYFCQAANDQNNVTIVANLQVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLEHS 577

Query: 341 IVW---------LRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           I W         L  S+    E     + S DYS         D G Y+C A T+LD +E
Sbjct: 578 ITWRGDGHNLQELGDSDKYIIEDGRLVIHSLDYS---------DQGNYSCVAGTKLDVVE 628

Query: 392 AQATLTV-----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
           ++A L V      VP    S+  L++     +  +SW+P    +       Y ++   ++
Sbjct: 629 SRAELLVVGSPGPVPQLELSDHHLLK---QSQVRLSWSPADDHN--APIEKYDIEFEDKE 683

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVP 504
                   L    G  T+T + K  P      RV A N    G PS    + VTPE  P
Sbjct: 684 MAPEKWYSLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPASETVVTPEAAP 741



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 151/565 (26%), Positives = 240/565 (42%), Gaps = 53/565 (9%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--NLRKSDTGN 194
           A + + +  EC A G P P I W+    P+    P+ R     +  T++  N+ + D G 
Sbjct: 281 ALQGQPLILECIAEGFPTPTIKWLRPSGPM----PSDRVTYQNHNKTLQLLNVGEEDDGE 336

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           Y C A NSLG      YV V A AP   + P+      G+TV L C+V G P+PEV W  
Sbjct: 337 YRCLAENSLGSDRHAYYVTVEA-APYWLQKPQSHLYGPGETVRLDCQVQGRPQPEVTWRI 395

Query: 255 NQ---KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH-- 309
           N    +EL   +   ++ G L ++++  +D+    C ARN+ G    +  + V +     
Sbjct: 396 NGIPVEELAKDQKYRIQRGALILSNIQPSDTMVTQCEARNRHGVLLANAYIYVVQLPAKI 455

Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
           +T   E Y    G +A   C A   P    S+ WL        + E RF    D +L + 
Sbjct: 456 LTPDNETYMAVEGSTAYLLCKAFGAPVP--SVQWLDKEGKTVLQDE-RFFPYTDGTLGIR 512

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV------SW 423
                D+G Y C+A  + + +   A L V+   +          I+ K + V      S+
Sbjct: 513 DLQANDTGHYFCQAANDQNNVTIVANLQVKDATQITQGPR--SAIEKKGSRVTFTCQASF 570

Query: 424 NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAF 483
           +P    S+     G+ +Q   + D      + I+  G      +D       N++ V   
Sbjct: 571 DPSLEHSITWRGDGHNLQELGDSD------KYIIEDGRLVIHSLD--YSDQGNYSCVAGT 622

Query: 484 NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQS 543
                   +E++   +P  VP    S   + L  S   L W   +  N  +  Y I+++ 
Sbjct: 623 KLDVVESRAELLVVGSPGPVPQLELSDHHL-LKQSQVRLSWSPADDHNAPIEKYDIEFED 681

Query: 544 VKGTKVGP----LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY 599
               ++ P     L ++P   + T+T+ KL+   P   Y   +    K G G  S     
Sbjct: 682 ---KEMAPEKWYSLGKVP--GNQTSTTLKLS---PYVHYTFRVTAINKYGPGEPSPASET 733

Query: 600 V------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQD 653
           V      P KNP +V+G G+  NN+V++W  +  ++ NAP  +YR+ WR   T   W + 
Sbjct: 734 VVTPEAAPEKNPVDVKGEGNETNNMVVTWKPLKWMDWNAPQVQYRVQWRPQGTRGTWQEQ 793

Query: 654 DVLDWRQSELVLANQPTFQPYEIKV 678
            V D     LV++N  TF PYEIKV
Sbjct: 794 IVSD---PFLVVSNTSTFVPYEIKV 815



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 174/691 (25%), Positives = 264/691 (38%), Gaps = 80/691 (11%)

Query: 51   VELFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
            V L C   G P P+  W  +G+P+     +   RI +G    +LI+ +++ SD     CE
Sbjct: 377  VRLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRG----ALILSNIQPSDTMVTQCE 432

Query: 106  VSN--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN- 162
              N  GV  A +Y I +  L A   T + E   A E  T    CKA G P P + W+   
Sbjct: 433  ARNRHGVLLANAY-IYVVQLPAKILTPDNETYMAVEGSTAYLLCKAFGAPVPSVQWLDKE 491

Query: 163  GKPISQAPPNPRRKVGP---NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHA 218
            GK + Q       +  P     + I +L+ +DTG+Y C A N    V   +  N+ +  A
Sbjct: 492  GKTVLQ-----DERFFPYTDGTLGIRDLQANDTGHYFCQAANDQNNV--TIVANLQVKDA 544

Query: 219  PEITEAPKDEYTVDGKTVVLTCRVFGAPKPE--VNWI---HNQKELTGGRYTILETGDLK 273
             +IT+ P+      G  V  TC+    P  E  + W    HN +EL      I+E G L 
Sbjct: 545  TQITQGPRSAIEKKGSRVTFTCQASFDPSLEHSITWRGDGHNLQELGDSDKYIIEDGRLV 604

Query: 274  ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE--DYEVEAGQSATFRCNA 331
            I  + ++D G Y+C A  KL   +    L V        Q E  D+ +          + 
Sbjct: 605  IHSLDYSDQGNYSCVAGTKLDVVESRAELLVVGSPGPVPQLELSDHHLLKQSQVRLSWSP 664

Query: 332  VSDPSLKLSIVWLRGSEPIDFESEPRFVQSND-YSLTVTKSSELDSG-------QYTCRA 383
              D +  +        E  D E E + +     YSL     ++  +         YT R 
Sbjct: 665  ADDHNAPI--------EKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYVHYTFRV 716

Query: 384  QTELDFIEAQ---ATLTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSPQSLRG 433
                 +   +   A+ TV  P  AP        +D K         VV+W P+       
Sbjct: 717  TAINKYGPGEPSPASETVVTPEAAPEK----NPVDVKGEGNETNNMVVTWKPLKWMDWNA 772

Query: 434  HFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
                Y+VQ W  +   G+ +E IV+      +    FVP      +V A N    GP   
Sbjct: 773  PQVQYRVQ-WRPQGTRGTWQEQIVSDPFLVVSNTSTFVPYE---IKVQAVNSQGKGPEPP 828

Query: 494  IISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVKGTK 548
            I    + E  P     LE I  L SS   ++W  V P    G L GY + Y  +  +   
Sbjct: 829  ITIGYSGEDYPQASPELEGIKILNSSTVLVRWWPVDPALVKGHLRGYNVTYWWEGSQRKH 888

Query: 549  VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF---KNP 605
                + +   +     TSA L GL P + Y + +  +   G G  S+  F+ P     +P
Sbjct: 889  SKRHVHKGHMVVPANATSAILGGLRPYSFYHLEVQAFNGRGLGPASEMTFHTPEGVPGHP 948

Query: 606  DNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVL 665
            + +     +  +L++ W   P + HN     Y + +  H       +    D    EL  
Sbjct: 949  EALHLECQSNTSLLLHW--QPPLSHNGVLTGYVLSY--HPLDNGGKEQLSFDLPDPELRS 1004

Query: 666  ANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
             N     P   Y  ++  T  E  GE  +RE
Sbjct: 1005 HNLSNLSPQLRYRFQLQATTKEGPGEAIVRE 1035



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 168/403 (41%), Gaps = 36/403 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLII--KHV 94
           ++ V      + L C   G P  +  W+ DGV   P +     + Q  +  S  I   + 
Sbjct: 70  RRLVVFPTDDISLKCEASGKPEVEFRWTHDGVHFKPKEELGVTVHQEPHSGSFTITGNNS 129

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG+Y C  SN +G A S+ I L    AP +   TV+P  +   E E+V   C  
Sbjct: 130 NFAQRFQGTYRCFASNKLGTAMSHEIQLMAEGAPKWPKETVKP--VEVEEGESVILPCHP 187

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+ N K I     + R  +G N  +   N+  SD   +Y CNA    +  
Sbjct: 188 PPSAEPLRIYWM-NSK-ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICNAHFPGTRT 245

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I+  P+  +          + G+ ++L C   G P P + W+ 
Sbjct: 246 IIQKEPIDLRVKATNSMISRKPRLLFPTNSSSHLVALQGQPLILECIAEGFPTPTIKWLR 305

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++ +V   D GEY C A N LG+ + +  +TV+   +   +
Sbjct: 306 PSGPMPSDRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSDRHAYYVTVEAAPYWLQK 365

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++    C     P  +  + W     P++  ++ +  +    +L ++    
Sbjct: 366 PQSHLYGPGETVRLDCQVQGRP--QPEVTWRINGIPVEELAKDQKYRIQRGALILSNIQP 423

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP--LEAPSNFTLIQV 413
            D+    C A+     + A A +  VQ+P  +  P N T + V
Sbjct: 424 SDTMVTQCEARNRHGVLLANAYIYVVQLPAKILTPDNETYMAV 466



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 120/304 (39%), Gaps = 54/304 (17%)

Query: 122 VLAAPYFTVE-PEFINAAEEETVTFECKASGLPEPEIHWVHNG---KPISQAPPNPRRKV 177
           V+  P  T + P  +     + ++ +C+ASG PE E  W H+G   KP  +      ++ 
Sbjct: 58  VMEPPVITEQSPRRLVVFPTDDISLKCEASGKPEVEFRWTHDGVHFKPKEELGVTVHQEP 117

Query: 178 GPNRITI----ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEAPKDEYTVD 232
                TI     N  +   G Y C A+N LG         +   AP+   E  K     +
Sbjct: 118 HSGSFTITGNNSNFAQRFQGTYRCFASNKLGTAMSHEIQLMAEGAPKWPKETVKPVEVEE 177

Query: 233 GKTVVLTCRVFGAPKPEVNWIHNQKEL---TGGRYTILETGDLKITDVAFADS-GEYTCF 288
           G++V+L C    + +P   +  N K L      R T+ + G+L   +V  +D+  +Y C 
Sbjct: 178 GESVILPCHPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYIC- 236

Query: 289 ARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA-------------------------GQ 323
                  A   G+ T+     I  +P D  V+A                         GQ
Sbjct: 237 ------NAHFPGTRTI-----IQKEPIDLRVKATNSMISRKPRLLFPTNSSSHLVALQGQ 285

Query: 324 SATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
                C A   P+   +I WLR S P+   S+    Q+++ +L +    E D G+Y C A
Sbjct: 286 PLILECIAEGFPT--PTIKWLRPSGPM--PSDRVTYQNHNKTLQLLNVGEEDDGEYRCLA 341

Query: 384 QTEL 387
           +  L
Sbjct: 342 ENSL 345


>gi|148693018|gb|EDL24965.1| mCG142130 [Mus musculus]
          Length = 1007

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 160/609 (26%), Positives = 256/609 (42%), Gaps = 45/609 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           A +   V++ C   G P+P   W K    I    R+ +      L I +++  D G Y C
Sbjct: 220 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRKSQ--AVLEIPNLQLDDAGIYEC 277

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N  G+  S+   L +   P++  +           + +ECKA+G P P   W+ NG 
Sbjct: 278 TAENSRGK-NSFRGQLQIFTYPHWVQKLNDTQLDSGSPLQWECKATGKPRPTYRWLKNGA 336

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--EIT 222
           P+    P  R       + I+++ +SD G Y C A N  G +Y    + +LA  P  E+ 
Sbjct: 337 PLL---PQSRVDTVNGILAIQSVNQSDAGMYQCLAENKYGAIYASAELKILASPPSFELN 393

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFAD 281
           +  K       + V++ C   G+PKP ++W    K +    R  IL  G L+I + + AD
Sbjct: 394 QVKKSIIVTKDRGVLIECEPQGSPKPAISWRKGDKAVRANKRIAILPDGSLRILNASKAD 453

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+Y C   N  G+A+   SL+VKE T I   P+  E+  G+S    C A+ D SL ++ 
Sbjct: 454 EGKYICQGVNIFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 513

Query: 342 VWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A L
Sbjct: 514 YWTLKGQPIDFEKEGGHFENIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAEL 573

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKDGE 449
            V+ P   P    +++ I    A +SW+P +          Y +Q        W      
Sbjct: 574 LVRGP-PGPPGVVIVEEITESTATLSWSPATDN--HSPISSYNLQARSPFSLGWQTVK-- 628

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQ 508
            ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T  
Sbjct: 629 -TVPEVITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSIPSRMIRTNEAVPKTAP 685

Query: 509 SLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISDPT 563
           S  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+ +
Sbjct: 686 SNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSEAS 740

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNL 618
               +   + P T + + +  Y   GDG  S+ +        P   P +V     + + +
Sbjct: 741 KFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPTAAPTDVTATSVSVSEI 800

Query: 619 VISWTAMPE 627
            + W  + E
Sbjct: 801 FVVWKHVKE 809



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 163/670 (24%), Positives = 245/670 (36%), Gaps = 91/670 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + A
Sbjct: 161 NLYISKVQTSDVGSYICLVKNAVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 220

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I NL+  D G Y 
Sbjct: 221 AKGTTVKMECFALGNPVPTITWMKVNG----YIPSKSRLRKSQAVLEIPNLQLDDAGIYE 276

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + +  + P   +   D     G  +   C+  G P+P   W+ N 
Sbjct: 277 CTAENSRGKNSFRGQLQIFTY-PHWVQKLNDTQLDSGSPLQWECKATGKPRPTYRWLKNG 335

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
             L          G L I  V  +D+G Y C A NK G    S  L       I   P  
Sbjct: 336 APLLPQSRVDTVNGILAIQSVNQSDAGMYQCLAENKYGAIYASAEL------KILASPPS 389

Query: 317 YE---------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
           +E         V   +     C     P  K +I W +G + +   +  R     D SL 
Sbjct: 390 FELNQVKKSIIVTKDRGVLIECEPQGSP--KPAISWRKGDKAV--RANKRIAILPDGSLR 445

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI----------QVI 414
           +  +S+ D G+Y C+        E  A+L+V+ P      P    L            + 
Sbjct: 446 ILNASKADEGKYICQGVNIFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIH 505

Query: 415 DAKKAVVSW-----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDK 469
           DA   V  +      P+  +   GHF   + Q       +  IR +++         V  
Sbjct: 506 DASLDVTFYWTLKGQPIDFEKEGGHFENIRAQA---SSADLMIRNILLMHAGRYGCRVQT 562

Query: 470 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQ 529
              +  + A +L       GPP          G PG V   E   +  S   L W     
Sbjct: 563 TADSVSDEAELLV-----RGPP----------GPPGVVIVEE---ITESTATLSWSPATD 604

Query: 530 PNGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
            +  +  Y ++ +S     +G   ++ +P +      SA    L P  +Y   +      
Sbjct: 605 NHSPISSYNLQARS--PFSLGWQTVKTVPEVITGDMESAMAVDLNPWVEYEFRVVATNPI 662

Query: 589 GDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G G  S      +    VP   P NV GR    + LVI+W  + E   N   F Y + +R
Sbjct: 663 GTGDPSIPSRMIRTNEAVPKTAPSNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFR 722

Query: 643 RHNTGEAWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV---N 697
            + T   W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V    
Sbjct: 723 PNGT-RGWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVVICSA 779

Query: 698 KGESTTTEVD 707
           +GE T    D
Sbjct: 780 EGEPTAAPTD 789



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 150/394 (38%), Gaps = 39/394 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           KKV L C   G P P   W ++G  I   SD       G  +I    E  D G Y C  +
Sbjct: 25  KKVALNCEVRGNPSPSYRWLRNGTEIALESDYRYSLIDGTFIISNPSELRDSGLYQCLAT 84

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N  G   S    L       F+      ++  E + V   C      PE    WV N  P
Sbjct: 85  NSFGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 144

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
            S    + RR +      + I  ++ SD G+Y C   N++                  V 
Sbjct: 145 -SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAVTNARVLSPPTPLTLRNDGVM 203

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            +    +  H P    A K      G TV + C   G P P + W+     +        
Sbjct: 204 GEYEPKIEVHFPFTVTAAK------GTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRK 257

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               L+I ++   D+G Y C A N  G     G L +  + H   +  D ++++G    +
Sbjct: 258 SQAVLEIPNLQLDDAGIYECTAENSRGKNSFRGQLQIFTYPHWVQKLNDTQLDSGSPLQW 317

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  + +  WL+   P+  +S    V + +  L +   ++ D+G Y C A+ + 
Sbjct: 318 ECKATGKP--RPTYRWLKNGAPLLPQSR---VDTVNGILAIQSVNQSDAGMYQCLAENKY 372

Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
             I A A L +   L +P +F L QV   KK+++
Sbjct: 373 GAIYASAELKI---LASPPSFELNQV---KKSII 400



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 114/288 (39%), Gaps = 33/288 (11%)

Query: 121 SVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
           SV   P F  EP+   F   ++E+ V   C+  G P P   W+ NG  I+         +
Sbjct: 2   SVDYGPVFVQEPDDVIFPTDSDEKKVALNCEVRGNPSPSYRWLRNGTEIALESDYRYSLI 61

Query: 178 GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTV 236
               I        D+G Y C ATNS G +         A+    +   +   +V +G+ V
Sbjct: 62  DGTFIISNPSELRDSGLYQCLATNSFGSILSREATLQFAYLGNFSGRTRSAVSVREGQGV 121

Query: 237 VLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTC 287
           VL C    +P P       +W+ N+          R+   ETG+L I+ V  +D G Y C
Sbjct: 122 VLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYIC 177

Query: 288 FARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATFRCNAVSDPS 336
             +N +  A+       LT++    + +     EV          G +    C A+ +P 
Sbjct: 178 LVKNAVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPV 237

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
              +I W++ +  I  +S  R  Q+    L +      D+G Y C A+
Sbjct: 238 --PTITWMKVNGYIPSKSRLRKSQA---VLEIPNLQLDDAGIYECTAE 280



 Score = 47.0 bits (110), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  +++ V + C   G+P P   W K    +  + RI+    G SL I +   +D+
Sbjct: 396 KKSIIVTKDRGVLIECEPQGSPKPAISWRKGDKAVRANKRIAILPDG-SLRILNASKADE 454

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEI 157
           G Y C+  N  G A+  +  LSV       + P+       E++   CKA      +   
Sbjct: 455 GKYICQGVNIFGSAEIIA-SLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 513

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          N R +     + I N+     G YGC
Sbjct: 514 YWTLKGQPIDFEKEGGHFENIRAQASSADLMIRNILLMHAGRYGC 558



 Score = 43.9 bits (102), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 86/203 (42%), Gaps = 23/203 (11%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P  AP++ T   V    +  V W  V  +SL G  +G+++  W + + E S+ E +  +G
Sbjct: 783 PTAAPTDVTATSV-SVSEIFVVWKHVK-ESL-GRPQGFEISYWKDTEPEDSV-ETVRTRG 838

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT----PEGVPGTVQSLEAIPLG 516
             +   +      +     V A+NGA  GPPS   S  T    P   PG ++  +     
Sbjct: 839 NESFVMLTGLEGNTLYHLTVRAYNGAGYGPPSREASTTTKRHPPREPPGNLRWEQQ---- 894

Query: 517 SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
            S   L W  V+P      +MGYK+ Y+  +G   G ++E        T     +  L  
Sbjct: 895 GSQVSLGWEPVRPLANESEVMGYKVFYRQ-EGHSEGQVIE--------TQKPQAVVPLPE 945

Query: 575 STKYRIHLAGYTKAGDGAESKYL 597
           +  Y I +  Y++ GDG  S  +
Sbjct: 946 AGVYIIEVRAYSEGGDGTASSQI 968


>gi|292626879|ref|XP_697914.4| PREDICTED: contactin-4-like [Danio rerio]
          Length = 1028

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 155/607 (25%), Positives = 269/607 (44%), Gaps = 54/607 (8%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P   W + DGVP      +S+ +    L I + +  D G Y C   N 
Sbjct: 247 VKLECFALGNPVPAISWRRPDGVPFPRKVDVSKSS--GVLEIPYFQQEDAGPYECVAENS 304

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+       LS  A P+   +P+ +  A +E++ +ECKAS  P+P   W+ NG+P+   
Sbjct: 305 RGKNTGKG-RLSFYAPPHLVEKPQDVQRAIDESLLWECKASAKPKPSYRWLKNGEPLESF 363

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
               R +V    ++I +L  SDTG Y C A N  G V+ +  + V+A AP+ + +     
Sbjct: 364 --EDRIQVINGALSISSLTLSDTGMYQCIAENRHGRVFANAELRVIAVAPDFSNSVLKAQ 421

Query: 230 TV--DGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSGEYT 286
           T+   G  V++ CR   +P+  ++W   ++ L    R ++L+ G L+I+++   D+G YT
Sbjct: 422 TLARQGGDVLIECRPRMSPRGMISWRKGKEALRESHRVSVLDNGSLRISNITKLDAGLYT 481

Query: 287 CFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           C ARN+ G A  +G+L VKE T IT +    +V  G+S    C    DPSL +   W   
Sbjct: 482 CVARNQFGVASSAGTLVVKEPTIITSKATQLDVTVGESVVIPCQVSRDPSLDVRFTWFFN 541

Query: 347 SEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPL 402
            + I+F S   + +    ++   + +       +G+YTC  QT++D       + V+ P 
Sbjct: 542 EQLINFGSHGGYFEKVGGASAGDIMIRNIQLRHAGRYTCAVQTKVDSASIATDVVVRGPP 601

Query: 403 EAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK--G 460
           + P +  + +V +   + VSW+P  P +    F  Y +Q  +         + +     G
Sbjct: 602 DPPLDIRVDEVTET-TSFVSWSP-GPDNHSPVF-AYNIQIRSPFSLGWQAAKTVPESLGG 658

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTPEGVPGTVQSLE 511
           + ++  V +  P  +   RVLA N    G P+         + +  +TP  V G   S  
Sbjct: 659 QQSSARVVELSPWVEYEFRVLATNSIGTGEPTKPSQKIRTKDTMPRITPARVSGGGGS-- 716

Query: 512 AIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKL 569
                 S   + W  V  EQ  G   GY + ++ + G      ++      D +    K 
Sbjct: 717 -----RSELVITWEPVPEEQQAGPGFGYVVAFRPLGGQN---WMQAAVTSPDASRYIFKN 768

Query: 570 AGLEPSTKYRIHLAGYTKAGDG----------AESKYLFYVPFKNPDNVEGRGSTPNNLV 619
             + P + + + +  Y   G+G          AE +     P + P  +  +  + + + 
Sbjct: 769 DSIPPFSPFHVKVGVYNNKGEGPFGPVTTIYSAEEE-----PSRAPSRIRAKSLSASEVE 823

Query: 620 ISWTAMP 626
           +SW  +P
Sbjct: 824 VSWKPLP 830



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 150/635 (23%), Positives = 245/635 (38%), Gaps = 79/635 (12%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V + +       ++           P   V+ PE +  
Sbjct: 182 NLYIAKVEPSDVGNYTCVVTNTVTQNRVQGPPTPLILRSDGIMGEYEPKIEVQFPEVLAV 241

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNR----ITIENLRKSDT 192
           A+  TV  EC A G P P I W   +G P         RKV  ++    + I   ++ D 
Sbjct: 242 AKGLTVKLECFALGNPVPAISWRRPDGVPFP-------RKVDVSKSSGVLEIPYFQQEDA 294

Query: 193 GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNW 252
           G Y C A NS G       ++  A  P + E P+D      ++++  C+    PKP   W
Sbjct: 295 GPYECVAENSRGKNTGKGRLSFYA-PPHLVEKPQDVQRAIDESLLWECKASAKPKPSYRW 353

Query: 253 IHNQKELTGGRYTI-LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTV----KEH 307
           + N + L      I +  G L I+ +  +D+G Y C A N+ G    +  L V     + 
Sbjct: 354 LKNGEPLESFEDRIQVINGALSISSLTLSDTGMYQCIAENRHGRVFANAELRVIAVAPDF 413

Query: 308 THITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
           ++   + +    + G      C     P   +S  W +G E +  ES  R    ++ SL 
Sbjct: 414 SNSVLKAQTLARQGGD-VLIECRPRMSPRGMIS--WRKGKEALR-ESH-RVSVLDNGSLR 468

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVS 427
           ++  ++LD+G YTC A+ +     +  TL V+ P    S  T + V   +  V+      
Sbjct: 469 ISNITKLDAGLYTCVARNQFGVASSAGTLVVKEPTIITSKATQLDVTVGESVVIPCQVSR 528

Query: 428 PQSLRGHFR--------------GYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPA 473
             SL   F               GY  +      G+  IR + +      T  V   V +
Sbjct: 529 DPSLDVRFTWFFNEQLINFGSHGGYFEKVGGASAGDIMIRNIQLRHAGRYTCAVQTKVDS 588

Query: 474 SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV 533
           +      +A +    GPP   +     E             +  +  ++ W      +  
Sbjct: 589 AS-----IATDVVVRGPPDPPLDIRVDE-------------VTETTSFVSWSPGPDNHSP 630

Query: 534 LMGYKIKYQS--VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           +  Y I+ +S    G +     + +P       +SA++  L P  +Y   +      G G
Sbjct: 631 VFAYNIQIRSPFSLGWQAA---KTVPESLGGQQSSARVVELSPWVEYEFRVLATNSIGTG 687

Query: 592 AESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
             +K    +      P   P  V G G + + LVI+W  +PE +   P F Y + +R   
Sbjct: 688 EPTKPSQKIRTKDTMPRITPARVSGGGGSRSELVITWEPVPEEQQAGPGFGYVVAFRPLG 747

Query: 646 TGEAWNQDDVLDWRQSELVLANQ--PTFQPYEIKV 678
            G+ W Q  V     S  +  N   P F P+ +KV
Sbjct: 748 -GQNWMQAAVTSPDASRYIFKNDSIPPFSPFHVKV 781



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 150/641 (23%), Positives = 253/641 (39%), Gaps = 86/641 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINP-SDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113
           C     P P   W K+G P+    DRI   N   +L I  +  SD G Y C   N  G  
Sbjct: 341 CKASAKPKPSYRWLKNGEPLESFEDRIQVIN--GALSISSLTLSDTGMYQCIAENRHGRV 398

Query: 114 KSYSIDLSVLAAPYFTVEPEFIN--------AAEEETVTFECKASGLPEPEIHWVHNGKP 165
            + + +L V+A     V P+F N        A +   V  EC+    P   I W    + 
Sbjct: 399 FA-NAELRVIA-----VAPDFSNSVLKAQTLARQGGDVLIECRPRMSPRGMISWRKGKEA 452

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           + ++    R  V  N  + I N+ K D G Y C A N  G       + V       ++A
Sbjct: 453 LRESH---RVSVLDNGSLRISNITKLDAGLYTCVARNQFGVASSAGTLVVKEPTIITSKA 509

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVN--WIHNQKELT----GGRYTIL---ETGDLKIT 275
            + + TV G++VV+ C+V   P  +V   W  N++ +     GG +  +     GD+ I 
Sbjct: 510 TQLDVTV-GESVVIPCQVSRDPSLDVRFTWFFNEQLINFGSHGGYFEKVGGASAGDIMIR 568

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA-------------- 321
           ++    +G YTC  + K+ +A  +  + V+      D P D  V+               
Sbjct: 569 NIQLRHAGRYTCAVQTKVDSASIATDVVVRGPP---DPPLDIRVDEVTETTSFVSWSPGP 625

Query: 322 -GQSATFRCN-AVSDPSLKLSIVWLRG-SEPIDF---ESEPRFVQSN---DYSLTVTKSS 372
              S  F  N  +  P    S+ W    + P      +S  R V+ +   +Y   V  ++
Sbjct: 626 DNHSPVFAYNIQIRSP---FSLGWQAAKTVPESLGGQQSSARVVELSPWVEYEFRVLATN 682

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            + +G+ T  +Q     I  + T+    P                + V++W PV  +   
Sbjct: 683 SIGTGEPTKPSQK----IRTKDTMPRITPARVSGGGG-----SRSELVITWEPVPEEQQA 733

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTT-EVDKFVPASKNFARVLAFNGAYNGPP 491
           G   GY V  +    G+  ++  + +   S    + D   P S    +V  +N    GP 
Sbjct: 734 GPGFGYVV-AFRPLGGQNWMQAAVTSPDASRYIFKNDSIPPFSPFHVKVGVYNNKGEGPF 792

Query: 492 SEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKP---EQPNGVLMGYKIKYQSVKGT 547
             + +  + E  P    S + A  L +S   + W KP         +MGY+++Y S K  
Sbjct: 793 GPVTTIYSAEEEPSRAPSRIRAKSLSASEVEVSW-KPLPWSTSRTRIMGYELRYWSTKDR 851

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PF 602
                + R    +    TSA + GL+PS+ Y I L  Y  AG G +S  +        P 
Sbjct: 852 PDTASVMR----TVGNRTSAVIRGLDPSSTYNIKLKAYNSAGVGPDSAVVNVTTKRPPPS 907

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
           ++P  V    +T + L++ W  +  +E+ +    Y++ +++
Sbjct: 908 QSPVKVMW-NTTDSKLILKWDHVKALENESEVMGYKVMYKQ 947



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 113/282 (40%), Gaps = 34/282 (12%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P   V P  +N    E VTF C+A G P P   W  N   IS   P  R  +    + I 
Sbjct: 32  PGSIVFPLHLNEPSRE-VTFSCEAQGRPPPSYRWKMNDSFISPQ-PGSRYSISGGNLRIS 89

Query: 186 NLRK-SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVF 243
            L K  D G Y C A+NS G +        +A+  E     +    V +G+ VVL C   
Sbjct: 90  QLNKEEDAGIYQCLASNSFGTILSREASLHIAYLEEFKTQMRSPVRVREGQGVVLLC--- 146

Query: 244 GAP----KPEVNWIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKL-- 293
           G P    +   +WI N+     E    R+   +TG+L I  V  +D G YTC   N +  
Sbjct: 147 GPPAYMGELTFSWIFNEYPSFVEQDTRRFVSQKTGNLYIAKVEPSDVGNYTCVVTNTVTQ 206

Query: 294 GTAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSLKLSIVWL 344
              QG  +  +     I  +         PE   V  G +    C A+ +P   +S  W 
Sbjct: 207 NRVQGPPTPLILRSDGIMGEYEPKIEVQFPEVLAVAKGLTVKLECFALGNPVPAIS--WR 264

Query: 345 RGSEPIDFESEPRFVQSNDYS--LTVTKSSELDSGQYTCRAQ 384
           R  + + F   PR V  +  S  L +    + D+G Y C A+
Sbjct: 265 R-PDGVPF---PRKVDVSKSSGVLEIPYFQQEDAGPYECVAE 302



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 88/199 (44%), Gaps = 13/199 (6%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P  APS     + + A +  VSW P+   + R    GY+++ W+ KD   +   ++   G
Sbjct: 805 PSRAPSRIRA-KSLSASEVEVSWKPLPWSTSRTRIMGYELRYWSTKDRPDTA-SVMRTVG 862

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
             T+  +    P+S    ++ A+N A  GP S +++  T    P             S  
Sbjct: 863 NRTSAVIRGLDPSSTYNIKLKAYNSAGVGPDSAVVNVTTKRPPPSQSPVKVMWNTTDSKL 922

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            LKW  VK  +    +MGYK+ Y+  + T+        P + +  +TS +L+ L     Y
Sbjct: 923 ILKWDHVKALENESEVMGYKVMYKQSRQTR--------PSVVETNSTSLELS-LPVDEDY 973

Query: 579 RIHLAGYTKAGDGAESKYL 597
            I +   ++ G+G+ SK +
Sbjct: 974 IIQIKPVSEGGEGSSSKQI 992


>gi|282847346|ref|NP_001164258.1| contactin-5 isoform 1 precursor [Mus musculus]
 gi|341940370|sp|P68500.2|CNTN5_MOUSE RecName: Full=Contactin-5; AltName: Full=Neural recognition
           molecule NB-2; Flags: Precursor
          Length = 1098

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 160/609 (26%), Positives = 256/609 (42%), Gaps = 45/609 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           A +   V++ C   G P+P   W K    I    R+ +      L I +++  D G Y C
Sbjct: 311 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRKSQ--AVLEIPNLQLDDAGIYEC 368

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N  G+  S+   L +   P++  +           + +ECKA+G P P   W+ NG 
Sbjct: 369 TAENSRGK-NSFRGQLQIFTYPHWVQKLNDTQLDSGSPLQWECKATGKPRPTYRWLKNGA 427

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--EIT 222
           P+    P  R       + I+++ +SD G Y C A N  G +Y    + +LA  P  E+ 
Sbjct: 428 PLL---PQSRVDTVNGILAIQSVNQSDAGMYQCLAENKYGAIYASAELKILASPPSFELN 484

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFAD 281
           +  K       + V++ C   G+PKP ++W    K +    R  IL  G L+I + + AD
Sbjct: 485 QVKKSIIVTKDRGVLIECEPQGSPKPAISWRKGDKAVRANKRIAILPDGSLRILNASKAD 544

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+Y C   N  G+A+   SL+VKE T I   P+  E+  G+S    C A+ D SL ++ 
Sbjct: 545 EGKYICQGVNIFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 604

Query: 342 VWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  +A L
Sbjct: 605 YWTLKGQPIDFEKEGGHFENIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAEL 664

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKDGE 449
            V+ P   P    +++ I    A +SW+P +          Y +Q        W      
Sbjct: 665 LVRGP-PGPPGVVIVEEITESTATLSWSPATDN--HSPISSYNLQARSPFSLGWQTVK-- 719

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQ 508
            ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T  
Sbjct: 720 -TVPEVITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSIPSRMIRTNEAVPKTAP 776

Query: 509 SLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISDPT 563
           S  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+ +
Sbjct: 777 SNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSEAS 831

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNL 618
               +   + P T + + +  Y   GDG  S+ +        P   P +V     + + +
Sbjct: 832 KFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPTAAPTDVTATSVSVSEI 891

Query: 619 VISWTAMPE 627
            + W  + E
Sbjct: 892 FVVWKHVKE 900



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 163/669 (24%), Positives = 244/669 (36%), Gaps = 91/669 (13%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INAA 138
           L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + AA
Sbjct: 253 LYISKVQTSDVGSYICLVKNAVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAA 312

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P I W+  NG      P   R +     + I NL+  D G Y C
Sbjct: 313 KGTTVKMECFALGNPVPTITWMKVNG----YIPSKSRLRKSQAVLEIPNLQLDDAGIYEC 368

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK 257
            A NS G       + +  + P   +   D     G  +   C+  G P+P   W+ N  
Sbjct: 369 TAENSRGKNSFRGQLQIFTY-PHWVQKLNDTQLDSGSPLQWECKATGKPRPTYRWLKNGA 427

Query: 258 ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDY 317
            L          G L I  V  +D+G Y C A NK G    S  L       I   P  +
Sbjct: 428 PLLPQSRVDTVNGILAIQSVNQSDAGMYQCLAENKYGAIYASAEL------KILASPPSF 481

Query: 318 E---------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
           E         V   +     C     P  K +I W +G + +   +  R     D SL +
Sbjct: 482 ELNQVKKSIIVTKDRGVLIECEPQGSP--KPAISWRKGDKAV--RANKRIAILPDGSLRI 537

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI----------QVID 415
             +S+ D G+Y C+        E  A+L+V+ P      P    L            + D
Sbjct: 538 LNASKADEGKYICQGVNIFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHD 597

Query: 416 AKKAVVSW-----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKF 470
           A   V  +      P+  +   GHF   + Q       +  IR +++         V   
Sbjct: 598 ASLDVTFYWTLKGQPIDFEKEGGHFENIRAQA---SSADLMIRNILLMHAGRYGCRVQTT 654

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
             +  + A +L       GPP          G PG V   E   +  S   L W      
Sbjct: 655 ADSVSDEAELLV-----RGPP----------GPPGVVIVEE---ITESTATLSWSPATDN 696

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           +  +  Y ++ +S     +G   ++ +P +      SA    L P  +Y   +      G
Sbjct: 697 HSPISSYNLQARS--PFSLGWQTVKTVPEVITGDMESAMAVDLNPWVEYEFRVVATNPIG 754

Query: 590 DGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  S      +    VP   P NV GR    + LVI+W  + E   N   F Y + +R 
Sbjct: 755 TGDPSIPSRMIRTNEAVPKTAPSNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRP 814

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV---NK 698
           + T   W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V    +
Sbjct: 815 NGT-RGWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVVICSAE 871

Query: 699 GESTTTEVD 707
           GE T    D
Sbjct: 872 GEPTAAPTD 880



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 150/394 (38%), Gaps = 39/394 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           KKV L C   G P P   W ++G  I   SD       G  +I    E  D G Y C  +
Sbjct: 116 KKVALNCEVRGNPSPSYRWLRNGTEIALESDYRYSLIDGTFIISNPSELRDSGLYQCLAT 175

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N  G   S    L       F+      ++  E + V   C      PE    WV N  P
Sbjct: 176 NSFGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 235

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
            S    + RR +      + I  ++ SD G+Y C   N++                  V 
Sbjct: 236 -SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAVTNARVLSPPTPLTLRNDGVM 294

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
            +    +  H P    A K      G TV + C   G P P + W+     +        
Sbjct: 295 GEYEPKIEVHFPFTVTAAK------GTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRK 348

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               L+I ++   D+G Y C A N  G     G L +  + H   +  D ++++G    +
Sbjct: 349 SQAVLEIPNLQLDDAGIYECTAENSRGKNSFRGQLQIFTYPHWVQKLNDTQLDSGSPLQW 408

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  + +  WL+   P+  +S    V + +  L +   ++ D+G Y C A+ + 
Sbjct: 409 ECKATGKP--RPTYRWLKNGAPLLPQSR---VDTVNGILAIQSVNQSDAGMYQCLAENKY 463

Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
             I A A L +   L +P +F L QV   KK+++
Sbjct: 464 GAIYASAELKI---LASPPSFELNQV---KKSII 491



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 123/299 (41%), Gaps = 39/299 (13%)

Query: 113 AKSYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
           + ++  D SV   P F  EP+   F   ++E+ V   C+  G P P   W+ NG  I+  
Sbjct: 85  SDAFRQDESVDYGPVFVQEPDDVIFPTDSDEKKVALNCEVRGNPSPSYRWLRNGTEIALE 144

Query: 170 PPNPRRKVGPNRITIEN---LRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
             + R  +      I N   LR  D+G Y C ATNS G +         A+    +   +
Sbjct: 145 -SDYRYSLIDGTFIISNPSELR--DSGLYQCLATNSFGSILSREATLQFAYLGNFSGRTR 201

Query: 227 DEYTV-DGKTVVLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITD 276
              +V +G+ VVL C    +P P       +W+ N+          R+   ETG+L I+ 
Sbjct: 202 SAVSVREGQGVVLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISK 257

Query: 277 VAFADSGEYTCFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSA 325
           V  +D G Y C  +N +  A+       LT++    + +     EV          G + 
Sbjct: 258 VQTSDVGSYICLVKNAVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTV 317

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
              C A+ +P    +I W++ +  I  +S  R  Q+    L +      D+G Y C A+
Sbjct: 318 KMECFALGNPV--PTITWMKVNGYIPSKSRLRKSQA---VLEIPNLQLDDAGIYECTAE 371



 Score = 46.6 bits (109), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  +++ V + C   G+P P   W K    +  + RI+    G SL I +   +D+
Sbjct: 487 KKSIIVTKDRGVLIECEPQGSPKPAISWRKGDKAVRANKRIAILPDG-SLRILNASKADE 545

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEI 157
           G Y C+  N  G A+  +  LSV       + P+       E++   CKA      +   
Sbjct: 546 GKYICQGVNIFGSAEIIA-SLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 604

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          N R +     + I N+     G YGC
Sbjct: 605 YWTLKGQPIDFEKEGGHFENIRAQASSADLMIRNILLMHAGRYGC 649



 Score = 43.5 bits (101), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 86/203 (42%), Gaps = 23/203 (11%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP++ T   V    +  V W  V  +SL G  +G+++  W + + E S+ E +  +G
Sbjct: 874  PTAAPTDVTATSV-SVSEIFVVWKHVK-ESL-GRPQGFEISYWKDTEPEDSV-ETVRTRG 929

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT----PEGVPGTVQSLEAIPLG 516
              +   +      +     V A+NGA  GPPS   S  T    P   PG ++  +     
Sbjct: 930  NESFVMLTGLEGNTLYHLTVRAYNGAGYGPPSREASTTTKRHPPREPPGNLRWEQQ---- 985

Query: 517  SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
             S   L W  V+P      +MGYK+ Y+  +G   G ++E        T     +  L  
Sbjct: 986  GSQVSLGWEPVRPLANESEVMGYKVFYRQ-EGHSEGQVIE--------TQKPQAVVPLPE 1036

Query: 575  STKYRIHLAGYTKAGDGAESKYL 597
            +  Y I +  Y++ GDG  S  +
Sbjct: 1037 AGVYIIEVRAYSEGGDGTASSQI 1059


>gi|47211486|emb|CAF95091.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1012

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 193/731 (26%), Positives = 307/731 (41%), Gaps = 84/731 (11%)

Query: 26  ASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGN 84
           AS  + AP  +     +   L  +K +L C   G P+P+  W K DG  + P+ +     
Sbjct: 199 ASPRKSAPSIKVRFPSETYGLAGQKAQLECFAYGNPVPKLRWRKVDG--LLPA-KTGTSA 255

Query: 85  YGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET-- 142
            G +LI+  + F D+G Y CE  N  G  ++Y   +SV A P +    + ++ +E E   
Sbjct: 256 EGPTLILPDLSFDDEGVYECEAYNSEGR-ETYQGRISVQAQPQWL---QVMSDSEVEISS 311

Query: 143 -VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATN 201
            + + C A+G P P I W+ NG+PI       R +V   ++ I NL   D+G Y C A N
Sbjct: 312 ELIWSCIAAGKPRPSIRWLRNGQPIGT---QDRVEVNGAKLKISNLALEDSGMYQCVAEN 368

Query: 202 SLGYVYKDVYVNVLAHAPEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL 259
             G +Y    + V   AP+    P  +      G  V + CR   APKP + W    + L
Sbjct: 369 KHGTIYSSAELRVQVQAPDFRLNPVRKLIPAARGGQVKIECRPRAAPKPSLFWSRGTELL 428

Query: 260 T-GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYE 318
           T   R T+   G L + +++ AD G+YTCFA N LG A  +G L+V++ T IT  P + +
Sbjct: 429 TNSSRVTVAPDGVLWLYNISRADEGKYTCFAENYLGKANSTGHLSVRDATKITLAPSNAD 488

Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP---RFVQS--NDYSLTVTKSSE 373
           +  G++ + +C+A  DP++ L+  W      +D E      R V+   N   L +  +  
Sbjct: 489 INQGENVSLQCHASHDPTMDLTFTWTLNGVLLDLEDPAGPYRRVEGKENIGDLMIKNAQL 548

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPV 426
             +G YTC AQT +D   A A L V+ P   P    L++ +      + W       +P+
Sbjct: 549 SQAGMYTCTAQTVVDSASAAAKLVVRGPPGPPGGL-LVKNVAETSVELRWSRGYDNHSPI 607

Query: 427 SPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
               + G  R   +Q W +   E +  E     G + +  V   +P      +V+A N  
Sbjct: 608 GKYVIMGR-RAPSLQ-WRQMRTEPANIE-----GNAESARVIGLIPWMDYEFKVIASNIL 660

Query: 487 YNGPPSEIISFVTPEGVPGTV--QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQ 542
            +G PS     V  +    TV    L           + W  +  E  NG   GY + ++
Sbjct: 661 GSGEPSMASHTVRTQQAAPTVAPSGLGGGGGDHHELIITWTPMAREYQNGDGFGYILAFK 720

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF 602
                    L  R+P++ D +        L P + + + +  Y + G+G         PF
Sbjct: 721 RKHAPSWTML--RIPHV-DSSRYVYYNESLSPYSPFDVMIRAYNRRGEG---------PF 768

Query: 603 KNPDNVEGRGSTPN--NLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ 660
                V      P    L I+ TA+     NA  F  ++ W           D V     
Sbjct: 769 SQIAVVHSAEEEPTVGPLSINATAL-----NA--FDIQVSW-----------DPVQQ--- 807

Query: 661 SELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 720
               L+     + YEI+    W  ++ E +  + +   G  TT  V    P+++    VL
Sbjct: 808 ----LSADGLLRGYEIRY---WRPQEREAAA-DRVRTVGRETTARVSGLRPSTRYHVSVL 859

Query: 721 AFNGAYNGPPS 731
           A+N A  GP S
Sbjct: 860 AYNSAGTGPSS 870



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 172/716 (24%), Positives = 280/716 (39%), Gaps = 99/716 (13%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            CI  G P P   W ++G PI   DR+     G  L I ++   D G Y C   N  G   
Sbjct: 317  CIAAGKPRPSIRWLRNGQPIGTQDRVEVN--GAKLKISNLALEDSGMYQCVAENKHGTIY 374

Query: 115  SYSIDLSV-LAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
            S S +L V + AP F + P  + I AA    V  EC+    P+P + W    + ++ +  
Sbjct: 375  S-SAELRVQVQAPDFRLNPVRKLIPAARGGQVKIECRPRAAPKPSLFWSRGTELLTNSS- 432

Query: 172  NPRRKVGPNRIT-IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
              R  V P+ +  + N+ ++D G Y C A N LG      +++V   A +IT AP +   
Sbjct: 433  --RVTVAPDGVLWLYNISRADEGKYTCFAENYLGKANSTGHLSV-RDATKITLAPSNADI 489

Query: 231  VDGKTVVLTCRVFGAPKPEVN--WIHN----QKELTGGRYTILE----TGDLKITDVAFA 280
              G+ V L C     P  ++   W  N      E   G Y  +E     GDL I +   +
Sbjct: 490  NQGENVSLQCHASHDPTMDLTFTWTLNGVLLDLEDPAGPYRRVEGKENIGDLMIKNAQLS 549

Query: 281  DSGEYTCFARNKLGTAQGSGSLTVKEHTH-----ITDQPEDYEVEAGQSATFRCNAVSDP 335
             +G YTC A+  + +A  +  L V+         +     +  VE   S  +  ++   P
Sbjct: 550  QAGMYTCTAQTVVDSASAAAKLVVRGPPGPPGGLLVKNVAETSVELRWSRGYDNHS---P 606

Query: 336  SLKLSIVWLRG---------SEPIDFESEPR------FVQSNDYSLTVTKSSELDSGQYT 380
              K  I+  R          +EP + E           +   DY   V  S+ L SG+ +
Sbjct: 607  IGKYVIMGRRAPSLQWRQMRTEPANIEGNAESARVIGLIPWMDYEFKVIASNILGSGEPS 666

Query: 381  CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
              + T    +  Q       P  APS        D  + +++W P++ +   G   GY +
Sbjct: 667  MASHT----VRTQQA----APTVAPSG-LGGGGGDHHELIITWTPMAREYQNGDGFGYIL 717

Query: 441  QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 500
                +     ++  +            +   P S     + A+N    GP S+I    + 
Sbjct: 718  AFKRKHAPSWTMLRIPHVDSSRYVYYNESLSPYSPFDVMIRAYNRRGEGPFSQIAVVHSA 777

Query: 501  EGVPGTV--QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERL 556
            E  P TV   S+ A  L +    + W  V+    +G+L GY+I+Y   +  +     +R+
Sbjct: 778  EEEP-TVGPLSINATALNAFDIQVSWDPVQQLSADGLLRGYEIRYWRPQEREAA--ADRV 834

Query: 557  PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGR 611
              +   TT  A+++GL PST+Y + +  Y  AG G  S           P + P NV  R
Sbjct: 835  RTVGRETT--ARVSGLRPSTRYHVSVLAYNSAGTGPSSPRTTVTTRKPPPNRCPGNVSWR 892

Query: 612  GSTPNNLVISWTAMPEIEHNAPHFKYRI---FWRRHNTGEA------------------- 649
               P  + + W  +  + + +    Y++      R N  EA                   
Sbjct: 893  TDGP-WVTVRWDHVTALHNESAVLGYKVSVCLCVRDNYQEAGEVLQSSCFLTTCLCCPCQ 951

Query: 650  -------WNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNK 698
                    N   VLD R +  V    P    Y +  +++W E  G+G  +E+IV++
Sbjct: 952  VLYKHEGQNTLKVLD-RSTSSVRLPLPKDNTYVVLEIRSWGE-GGDGPAQEIIVSR 1005



 Score = 43.1 bits (100), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 69/306 (22%), Positives = 105/306 (34%), Gaps = 46/306 (15%)

Query: 126 PYFTVEPEFINAAE---EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
           P F  +P  +   E   E  VT  C+A   P     W+ NG  +          V  + +
Sbjct: 2   PVFEEQPSSLIYPEGLTEGKVTLSCQARASPAASYRWLVNGTEVPLGLDLHYTLVAGSLV 61

Query: 183 TIENLRKSDTGNYGCNATNSLGYVYK---DVYVNVLAHAPEITEAPKDEYTVDGKTVVLT 239
                   D G+Y C A N  G V      +    L   P  + +P+  Y  +G    L 
Sbjct: 62  ISSPESHRDAGSYQCLAINRCGTVISRAATLKFGYLNDFPTDSRSPQTAY--EGAGTFLA 119

Query: 240 CRVFGAPKPE---------VNWIHNQKELTGGRYTILE-TGDLKITDVAFADSGEYTCFA 289
           CR    P P          +N   N  + + GR+ + + TG+L + +   +D+  Y CF 
Sbjct: 120 CR----PPPHYPALSYRWFINEFPNFLKKSDGRWFVSQVTGNLYLANTEQSDTANYFCFT 175

Query: 290 RNKLGTAQGSGSLTVKEHTHITDQPEDYEVE----------------AGQSATFRCNAVS 333
              +  +  S   T      +T  PE    +                AGQ A   C A  
Sbjct: 176 TINMEISSKS---TFSRPIQLTVLPEASPRKSAPSIKVRFPSETYGLAGQKAQLECFAYG 232

Query: 334 DPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393
           +P  KL    + G  P    +      +   +L +   S  D G Y C A         Q
Sbjct: 233 NPVPKLRWRKVDGLLPAKTGTS-----AEGPTLILPDLSFDDEGVYECEAYNSEGRETYQ 287

Query: 394 ATLTVQ 399
             ++VQ
Sbjct: 288 GRISVQ 293


>gi|345481818|ref|XP_001605123.2| PREDICTED: protein sidekick-like [Nasonia vitripennis]
          Length = 2182

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 165/585 (28%), Positives = 246/585 (42%), Gaps = 75/585 (12%)

Query: 53  LFCIFGGTPLPQ--TIWSKDGVPINPSDRIS---QGNYGKSLIIKHVEFSDQGSYTCEVS 107
           L CI     L +  TIW+KD +PI  + RI+   Q ++ ++LI+     +  G Y C V 
Sbjct: 261 LHCIANARSLHELRTIWTKDDIPIEDA-RIAFNFQDSWNRTLILISANLTYTGVYACHVD 319

Query: 108 --NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEE-ETVTFECKASGLPEPEIHWVHNGK 164
             +G     S S  + VL  P F  E + +  +E   TVT  C   G+P P I W  N +
Sbjct: 320 LRSGGYPTISASAMIEVLEKPTFVAELKRVTLSEYGTTVTLPCDTDGVPPPTIQWFRNAE 379

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           P+               +TI+ L   D+G + C A N  G      ++      P +   
Sbjct: 380 PVDSLLGTRYAMQEDGSLTIKKLTMEDSGMFQCLALNEAGEASSYTWLKAKTSIPIMEIP 439

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT--GGRYTILETGDLKITDVAFADS 282
           P++   +DGK   L CR   AP P V W++N        GR  +LE GDL I DV  +D+
Sbjct: 440 PQNVTVLDGKDANLNCRAIAAPVPNVTWMYNDTTPVEIAGRVQVLENGDLLIADVKPSDA 499

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G+YTC   N+ G+  GS  ++V   T I   P D  V  G +A  +C   +DPS+K  I 
Sbjct: 500 GKYTCIRANEAGSVNGSAYVSVLVRTQIIQPPVDQSVLLGHTAELKCEVSNDPSVKYDIA 559

Query: 343 WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV-QVP 401
           W   S+ I+  + PR    ND +L +      D G+Y C   +        A L+V ++P
Sbjct: 560 WFHNSQVINTRASPRVKMQNDGTLEIGAVRASDVGEYMCSVVSSGGNETRTARLSVIELP 619

Query: 402 LEAPSNFTLIQV--IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
             AP N    +V  I  +   V+W P           G+        DG   I+  IV +
Sbjct: 620 F-APINVVASRVEEISPRTINVTWVP-----------GF--------DGNSPIKSFIVQR 659

Query: 460 GE------------------STTTEVDKFV-------PASKNFARVLAFNGAYNGPPSEI 494
            E                  S  +  +++V        A+  F RV A N    GP SE 
Sbjct: 660 REVPELGPLPDTSLNWITEYSNISASNRWVLFNNLKAAAAYQF-RVSAENSVGEGPSSEP 718

Query: 495 ISFVT-----PEGVP-GTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKG 546
            + V      P G P G V S  +    SS    +W  P  E  NG ++GY ++Y+ + G
Sbjct: 719 SNVVLLPQEPPTGPPLGFVGSARS----SSEIITQWQLPAEEHRNGHILGYVLRYK-LHG 773

Query: 547 TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
               P +  +  I++    +  +  L     Y + +A Y   G G
Sbjct: 774 YNETPWM--IQNITNEAQKNYLITDLITWKDYIVQIAAYNDKGVG 816



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 24/205 (11%)

Query: 403  EAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGES 462
            EAP     ++ I++    V W P +PQ++ G  +GYK+Q W      G   E   N+ +S
Sbjct: 832  EAPPTDVRVKAINSTAVNVWWKPPNPQNINGINQGYKLQAW----HNGGFAE--ENEYKS 885

Query: 463  TTTEVDKFVPASKNFA-------------RVLAFNGAYNGPPSEIISFVTPEGVPGTVQS 509
             T   + F P ++  A              VL F    +G  S  +S  T E VPG V++
Sbjct: 886  ITVAPNLFDPQAEQNAVIPNLRKYTLYNITVLCFTNPGDGERSAPVSVRTSEDVPGKVEN 945

Query: 510  LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKL 569
            L+ + +   A  +KW  P++ NGVL  Y++KY ++K       L  L + +D    S K+
Sbjct: 946  LQFLNISDRALTVKWRPPKEINGVLTFYQLKY-TIKDKP--DTLRVLNFTAD--MLSTKI 1000

Query: 570  AGLEPSTKYRIHLAGYTKAGDGAES 594
              L+ +T Y   +  +T  G G  S
Sbjct: 1001 EQLQATTHYTFEVLAWTSKGPGEPS 1025



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 158/413 (38%), Gaps = 68/413 (16%)

Query: 46  LRNKKVELF-CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           L   + ++F C  GG P P+  W KDG P+  ++ ++   + +   I +    D G Y C
Sbjct: 65  LSENRTKIFQCQAGGNPQPKYRWFKDGKPL--TNELTSEYFYR---IHNTRREDSGVYYC 119

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFEC-KASGLPEPEIHWVHN 162
             +N VG   S  I  SV     F  +    +  +  E    E       P PE+ W  +
Sbjct: 120 VATNEVGAIFSERISFSVAYMGEFEDLTERGLEVSSGEAAVLEMPHIESHPVPEVIWSTS 179

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS-LGYVYKDVYVNVLAH---- 217
              I   P   +     +++ I N  +SD G+Y   A N+ LG      +  +       
Sbjct: 180 DGII---PYTIKYAKVYHKLLILNAAESDEGSYRARAINTQLGKEENSPFFKLKVTGDPN 236

Query: 218 ---APEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLK 273
              AP I   P+D   + D  T  L C            I N + L   R TI    D+ 
Sbjct: 237 AEVAPTIVVKPEDTKIIKDQGTTYLHC------------IANARSLHELR-TIWTKDDIP 283

Query: 274 ITDVA----FADS---------------GEYTCFARNKLG---TAQGSGSLTVKEH-THI 310
           I D      F DS               G Y C    + G   T   S  + V E  T +
Sbjct: 284 IEDARIAFNFQDSWNRTLILISANLTYTGVYACHVDLRSGGYPTISASAMIEVLEKPTFV 343

Query: 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTK 370
            +       E G + T  C+    P    +I W R +EP+D     R+    D SLT+ K
Sbjct: 344 AELKRVTLSEYGTTVTLPCDTDGVP--PPTIQWFRNAEPVDSLLGTRYAMQEDGSLTIKK 401

Query: 371 SSELDSGQYTCRAQTE------LDFIEAQATLTV-QVPLEAPSNFTLIQVIDA 416
            +  DSG + C A  E        +++A+ ++ + ++P   P N T++   DA
Sbjct: 402 LTMEDSGMFQCLALNEAGEASSYTWLKAKTSIPIMEIP---PQNVTVLDGKDA 451



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 118/284 (41%), Gaps = 39/284 (13%)

Query: 123 LAAPYFTVEPEFINA--AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN 180
           L  P F+ +P       +E  T  F+C+A G P+P+  W  +GKP++            N
Sbjct: 49  LQEPRFSTQPSSSGGILSENRTKIFQCQAGGNPQPKYRWFKDGKPLT------------N 96

Query: 181 RIT------IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            +T      I N R+ D+G Y C ATN +G ++ +     +A+  E  +  +    V  G
Sbjct: 97  ELTSEYFYRIHNTRREDSGVYYCVATNEVGAIFSERISFSVAYMGEFEDLTERGLEVSSG 156

Query: 234 KTVVLTC-RVFGAPKPEVNWIHNQKELTGGRYTILETG---DLKITDVAFADSGEYTCFA 289
           +  VL    +   P PEV W  +   +    YTI        L I + A +D G Y   A
Sbjct: 157 EAAVLEMPHIESHPVPEVIWSTSDGIIP---YTIKYAKVYHKLLILNAAESDEGSYRARA 213

Query: 290 RN-KLGTAQGS--------GSLTVKEHTHITDQPEDYEVEAGQSATF-RCNAVSDPSLKL 339
            N +LG  + S        G    +    I  +PED ++   Q  T+  C A +    +L
Sbjct: 214 INTQLGKEENSPFFKLKVTGDPNAEVAPTIVVKPEDTKIIKDQGTTYLHCIANARSLHEL 273

Query: 340 SIVWLRGSEPI-DFESEPRFVQSNDYSLTVTKSSELDSGQYTCR 382
             +W +   PI D      F  S + +L +  ++   +G Y C 
Sbjct: 274 RTIWTKDDIPIEDARIAFNFQDSWNRTLILISANLTYTGVYACH 317



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 17/217 (7%)

Query: 421  VSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSI----RELIVNKGESTTTEVDKFVPAS 474
            V W+P+      G  +  GY++      D   +I    +E +    E+  T  D  +   
Sbjct: 1555 VHWDPIDELHWSGDHQTGGYRISYQILSDFPSAIAGPPKEEVKGINETKKTLTD--LTED 1612

Query: 475  KNFARVLA-FNGAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWVKPE--QP 530
            K +  ++A FN    GPPS  ++    E +P G  Q +   P+ S+   LKW  P+    
Sbjct: 1613 KYYEVIVAPFNSEGEGPPSLPVTVYVGEAIPTGEPQQVTLEPISSTEVQLKWKPPQANMQ 1672

Query: 531  NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSA-KLAGLEPSTKYRIHLAGYTKAG 589
            NG L+GYKI Y      +     +       P + S   L  L+  T+YRI +  +  AG
Sbjct: 1673 NGELLGYKIFYLVTDSPQELEKKQEEEIEVVPASYSMHSLVFLDKYTQYRIQVLAFNPAG 1732

Query: 590  DGAESKYLFYVPFKN----PDNVEGRGSTPNNLVISW 622
            DG  S  +     ++    P N++    T  +L++SW
Sbjct: 1733 DGPRSPPITVRTKQDIPGPPQNLQFSEITLTSLIVSW 1769



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 112/259 (43%), Gaps = 46/259 (17%)

Query: 397  TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
            T+Q P   P     ++ + A +  V W P+      G+ RGY +          + RE+ 
Sbjct: 1132 TIQAPPSHPPRNVTVRAMSATELRVRWIPLQQVEWYGNPRGYNI----------TYREVR 1181

Query: 457  VNKGESTTTE---VDKFVPAS-KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA 512
             NK +S + +    + +V  + + FA    +  AYN   S  +S   P+ V  T +S+ +
Sbjct: 1182 TNKSKSISIDDHTANSYVLENMEEFALYEVYMHAYNDVGSSTLS---PKAVERTRESVPS 1238

Query: 513  I-PLG-------SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
            + P+G       S+   +KW  V  E  NG + GYK+ Y++   T+     + +P  S  
Sbjct: 1239 LGPIGVEANATSSTTIVVKWKEVPIEHQNGQIEGYKVYYRA--NTRSPFQFKNIPSNSTF 1296

Query: 563  TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISW 622
            TTT   L  L    +Y + +  YT+ GDGA S     +P       E     P+N+    
Sbjct: 1297 TTT---LTELRKYVQYHVQVLAYTRLGDGALS-----MPPIRVQTFEDVPGPPSNV---- 1344

Query: 623  TAMPEIEHNAPHFKYRIFW 641
             ++P++  N      RI W
Sbjct: 1345 -SLPDVSFNTA----RIIW 1358



 Score = 46.2 bits (108), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 73/177 (41%), Gaps = 16/177 (9%)

Query: 420  VVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTT-TEVDKFVPASKNFA 478
            VV W  V  +   G   GYKV            + +  N   +TT TE+ K+V   +   
Sbjct: 1255 VVKWKEVPIEHQNGQIEGYKVYYRANTRSPFQFKNIPSNSTFTTTLTELRKYV---QYHV 1311

Query: 479  RVLAF----NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
            +VLA+    +GA + PP  + +F   E VPG   ++    +  +   + W  PE PNG +
Sbjct: 1312 QVLAYTRLGDGALSMPPIRVQTF---EDVPGPPSNVSLPDVSFNTARIIWDTPEDPNGDI 1368

Query: 535  MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            + +K+ +        G +  +       TT +     LEP   Y   +   ++ G G
Sbjct: 1369 LAFKVMFH-----LNGSMNHQFAKEFSATTRTFTATNLEPEKYYMFSVTAQSRLGWG 1420



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 11/151 (7%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV-----QTWTEKDGEGSIRE 454
            +P   P   TL + I + +  + W P       G   GYK+      +  E + +     
Sbjct: 1642 IPTGEPQQVTL-EPISSTEVQLKWKPPQANMQNGELLGYKIFYLVTDSPQELEKKQEEEI 1700

Query: 455  LIVNKGESTTTEV--DKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA 512
             +V    S  + V  DK+   ++   +VLAFN A +GP S  I+  T + +PG  Q+L+ 
Sbjct: 1701 EVVPASYSMHSLVFLDKY---TQYRIQVLAFNPAGDGPRSPPITVRTKQDIPGPPQNLQF 1757

Query: 513  IPLGSSAFYLKWVKPEQPNGVLMGYKIKYQS 543
              +  ++  + W  P+  NG ++GY + Y++
Sbjct: 1758 SEITLTSLIVSWDPPKMRNGEIVGYVVSYKT 1788



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 65/296 (21%), Positives = 117/296 (39%), Gaps = 20/296 (6%)

Query: 391  EAQATLTVQVPLEAPSNFTLIQV--IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
            E  A ++V+   + P     +Q   I  +   V W P  P+ + G    Y+++ +T KD 
Sbjct: 926  ERSAPVSVRTSEDVPGKVENLQFLNISDRALTVKWRP--PKEINGVLTFYQLK-YTIKDK 982

Query: 449  EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS--EIISFVTPEGVPGT 506
              ++R L     +  +T++++    +     VLA+     G PS   I S V P  +P  
Sbjct: 983  PDTLRVLNFT-ADMLSTKIEQLQATTHYTFEVLAWTSKGPGEPSIATIQSGVEPV-LPEP 1040

Query: 507  VQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
               L    + + +  L++      N  +  + ++ Q+ + T    + E    I DP    
Sbjct: 1041 PTKLALSNIDAFSIVLQFTPGFNGNASISKWTVQAQTTRNTTWHTISE----IYDPDARK 1096

Query: 567  AKLAGLEPSTKYRIHLAGYTKAGDGA------ESKYLFYVPFKNPDNVEGRGSTPNNLVI 620
              + GL P  +Y++ L      G  A      E + +   P   P NV  R  +   L +
Sbjct: 1097 IMVEGLTPFMQYKLRLIANNVVGASAPSEPTKEFQTIQAPPSHPPRNVTVRAMSATELRV 1156

Query: 621  SWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEI 676
             W  + ++E       Y I +R   T ++     + D   +  VL N   F  YE+
Sbjct: 1157 RWIPLQQVEWYGNPRGYNITYREVRTNKS-KSISIDDHTANSYVLENMEEFALYEV 1211



 Score = 40.4 bits (93), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 61/160 (38%), Gaps = 22/160 (13%)

Query: 489  GPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTK 548
             PPS     VT   +  T   +  IPL    +Y          G   GY I Y+ V+  K
Sbjct: 1135 APPSHPPRNVTVRAMSATELRVRWIPLQQVEWY----------GNPRGYNITYREVRTNK 1184

Query: 549  VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-----AESKYLFYVPFK 603
               +      I D T  S  L  +E    Y +++  Y   G       A  +    VP  
Sbjct: 1185 SKSI-----SIDDHTANSYVLENMEEFALYEVYMHAYNDVGSSTLSPKAVERTRESVPSL 1239

Query: 604  NPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK-YRIFWR 642
             P  VE   ++   +V+ W  +P IEH     + Y++++R
Sbjct: 1240 GPIGVEANATSSTTIVVKWKEVP-IEHQNGQIEGYKVYYR 1278


>gi|348521534|ref|XP_003448281.1| PREDICTED: neural cell adhesion molecule L1-like [Oreochromis
           niloticus]
          Length = 1283

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 137/457 (29%), Positives = 210/457 (45%), Gaps = 18/457 (3%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           ALR + +EL CI  G P P+  W +    ++ + R ++  + + L   ++  SD G Y C
Sbjct: 272 ALRGQTLELECIVEGLPTPEVSWMRRDGELSET-RTTKDMFDRRLRFTNISESDGGEYQC 330

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N  G  K   + L+V AAPY+  EP     A  ETV  +C+A G+P P I W  NG 
Sbjct: 331 IAENSQGNTKHIYM-LTVEAAPYWIKEPVSQLYAPGETVRLDCQADGIPSPIISWTINGV 389

Query: 165 PISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           PIS    +PRR +     + +E++   DT  Y C A+N  G +  +  V V+   P+I  
Sbjct: 390 PISGVDKDPRRTLTASGSLILEDVNFGDTAIYQCRASNKHGTILTNTNVYVIELPPQILT 449

Query: 224 APKDEYT-VDGKTVVLTCRVFGAPKPEVNWIHNQKE---LTGGRYTILETGDLKITDVAF 279
              + Y   +G+  +L C  FG+PKP+V W  N      L   R   L  G L+I +V  
Sbjct: 450 DDGNTYAYTEGQKALLECETFGSPKPKVIWERNNDSSFLLADRRVNPLSNGWLEIANVTH 509

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           +D G YTC   N       S  L +   T I   P+  +V+AG+ A F C +++DP L  
Sbjct: 510 SDDGIYTCTVPN--SNLSISAELEIFNRTVILSPPQALKVQAGERAIFTCLSLADPRLDP 567

Query: 340 SIV-WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             + W + ++ +   +  +    +   L +      D G YTC   T+LD  EA+ TLT+
Sbjct: 568 PFIQWRKNNQKLADSNNDKKYTMDGPDLKIADVQPDDEGVYTCEIITKLDVAEARGTLTL 627

Query: 399 QVPLEAPSNFTLIQVIDAKKAVV--SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
               + P    L+Q+ D K   V  SW P    +  G    Y V+   ++  E S+ +++
Sbjct: 628 ---WDRPDPPILLQISDPKDRTVTLSWTPGDDHN--GPVTEYVVEFEDQRSNE-SVWKML 681

Query: 457 VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
               E+    V    P      RV+A N      PS+
Sbjct: 682 ARVRENKERAVLSLWPFMSYRFRVIAINDVGKSDPSK 718



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 136/286 (47%), Gaps = 31/286 (10%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VPLEAP +   +++I++    V+W P+  +++RGH  GYK+  +T K      R     +
Sbjct: 828  VPLEAPMDVG-VEIINSTTIKVTWAPIDKETVRGHLLGYKIH-YTRKVHRSHHRGRRAQE 885

Query: 460  GESTT---TE-------VDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQS 509
             EST    TE       +    P S    +V  +N    GP SE + F TPEGVPG   +
Sbjct: 886  LESTVVVKTEPNEKKKVISDLRPFSNYTLKVTVYNIKGEGPFSEALPFETPEGVPGPPLT 945

Query: 510  LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKL 569
            L       +   L W  P QPNGVL+GY ++YQ +  +   P+  ++  I DPT T   L
Sbjct: 946  LTLDSPSETEMTLHWTPPGQPNGVLIGYLLQYQQITESDDSPM--QVETIDDPTVTHITL 1003

Query: 570  AGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIE 629
              L+  + YR +L G T AGDG        VP      +  +G+T  + V+       + 
Sbjct: 1004 KNLDHKSDYRFYLRGRTAAGDG--------VP------ITMKGATMLDGVVPMEISLSVG 1049

Query: 630  HNAPHFKYRIFWRRHNTG---EAWNQDDVLDWRQSELVLANQPTFQ 672
             NA +F +    R  N G   +  N++D   W+ +E V ++Q  +Q
Sbjct: 1050 ENAVNFSWVPEKRHRNVGFQIQYSNKNDGNKWKATEKVNSSQSFYQ 1095



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 154/358 (43%), Gaps = 31/358 (8%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINP-SD---RISQ--GNYGKSLIIKHVEFSD--QGSYTC 104
           + C   G P P   W+KDG   +P SD   ++S+  G++    +   ++  +  +G Y C
Sbjct: 72  MNCEASGNPSPIFRWAKDGEDFDPGSDPELKVSESSGSFAFYTLSNTMDTLNKYKGKYVC 131

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEE-ETVTFECK-ASGLPEPEIHWVHN 162
             SN +G A S    L+    P    + +    A+E ++   +C       EP IHW+  
Sbjct: 132 YASNELGTAVSNEAILNTDVPPSQQKDKKVDETADEGKSFILKCNPPQSSMEPIIHWMD- 190

Query: 163 GKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCN----ATNS-LGYVYKDVYVN-- 213
              +     + R  VG +  +   NL  SD+  +Y CN    AT + L      + VN  
Sbjct: 191 -LRLRHIELSKRVMVGKDGNLYFANLESSDSRDDYTCNVQYLATRTILAKEPTSLKVNPS 249

Query: 214 --VLAHAPEITEAPKDEYT----VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI- 266
             VL +       P   ++    + G+T+ L C V G P PEV+W+    EL+  R T  
Sbjct: 250 NSVLRNRRPQMMRPTGHHSTYHALRGQTLELECIVEGLPTPEVSWMRRDGELSETRTTKD 309

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
           +    L+ T+++ +D GEY C A N  G  +    LTV+   +   +P       G++  
Sbjct: 310 MFDRRLRFTNISESDGGEYQCIAENSQGNTKHIYMLTVEAAPYWIKEPVSQLYAPGETVR 369

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPID-FESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
             C A   PS  +S  W     PI   + +PR   +   SL +   +  D+  Y CRA
Sbjct: 370 LDCQADGIPSPIIS--WTINGVPISGVDKDPRRTLTASGSLILEDVNFGDTAIYQCRA 425



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 118/304 (38%), Gaps = 36/304 (11%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P    +PE +     E     C+ASG P P   W  +G+       +P  KV  +  +  
Sbjct: 53  PVIKTQPESVTVFSTEDFVMNCEASGNPSPIFRWAKDGEDFDPG-SDPELKVSESSGSFA 111

Query: 186 NLRKSDT--------GNYGCNATNSLG-YVYKDVYVNVLAHAPEITEAPKDEYTVDGKTV 236
               S+T        G Y C A+N LG  V  +  +N      +  +   DE   +GK+ 
Sbjct: 112 FYTLSNTMDTLNKYKGKYVCYASNELGTAVSNEAILNTDVPPSQQKDKKVDETADEGKSF 171

Query: 237 VLTCR-VFGAPKPEVNWIH---NQKELTGGRYTILETGDLKITDVAFADS-GEYTC---F 288
           +L C     + +P ++W+       EL+  R  + + G+L   ++  +DS  +YTC   +
Sbjct: 172 ILKCNPPQSSMEPIIHWMDLRLRHIELS-KRVMVGKDGNLYFANLESSDSRDDYTCNVQY 230

Query: 289 ARNKLGTAQGSGSLTVKEHTHI-----------TDQPEDYEVEAGQSATFRCNAVSDPSL 337
              +   A+   SL V     +           T     Y    GQ+    C     P+ 
Sbjct: 231 LATRTILAKEPTSLKVNPSNSVLRNRRPQMMRPTGHHSTYHALRGQTLELECIVEGLPTP 290

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
           ++S  W+R    +   SE R  +   D  L  T  SE D G+Y C A+      +    L
Sbjct: 291 EVS--WMRRDGEL---SETRTTKDMFDRRLRFTNISESDGGEYQCIAENSQGNTKHIYML 345

Query: 397 TVQV 400
           TV+ 
Sbjct: 346 TVEA 349



 Score = 39.3 bits (90), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 66/183 (36%), Gaps = 15/183 (8%)

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD--- 271
           L   P I   P+       +  V+ C   G P P   W  + ++   G    L+  +   
Sbjct: 49  LKRPPVIKTQPESVTVFSTEDFVMNCEASGNPSPIFRWAKDGEDFDPGSDPELKVSESSG 108

Query: 272 -------LKITDVAFADSGEYTCFARNKLGTAQGSGSL--TVKEHTHITDQPEDYEVEAG 322
                      D      G+Y C+A N+LGTA  + ++  T    +   D+  D   + G
Sbjct: 109 SFAFYTLSNTMDTLNKYKGKYVCYASNELGTAVSNEAILNTDVPPSQQKDKKVDETADEG 168

Query: 323 QSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS-GQYTC 381
           +S   +CN     S++  I W+        E   R +   D +L        DS   YTC
Sbjct: 169 KSFILKCNPPQS-SMEPIIHWM-DLRLRHIELSKRVMVGKDGNLYFANLESSDSRDDYTC 226

Query: 382 RAQ 384
             Q
Sbjct: 227 NVQ 229


>gi|440898854|gb|ELR50265.1| Protein sidekick-2, partial [Bos grunniens mutus]
          Length = 2058

 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 166/609 (27%), Positives = 247/609 (40%), Gaps = 51/609 (8%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +   V   + +V + C+    PL +   IW KDGV +  S  IS  +Y + L I +   S
Sbjct: 199 KNTSVVAGSSEVTMECVANARPLIKLHIIWKKDGVLL--SSGIS--DYNRRLTIPNPAAS 254

Query: 98  DQGSYTCEVSNGVGEAKSY--SIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPE 154
           D G Y CE         S      LSVL  P F  EPE  I A  E+ V   C+A G+P 
Sbjct: 255 DAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQFVKEPERHITAEMEKVVDIPCRAKGVPP 314

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
           P I W  +   +     +  R+ G   + I  L   DTG   C A N+ G      Y+ V
Sbjct: 315 PSITWYKDAALVEVGRLSRFRQRGDGGLQISGLVPDDTGMLQCFARNAAGEAQTSTYLAV 374

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILET 269
            + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T+LE+
Sbjct: 375 TSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLES 434

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L ++    +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+  C
Sbjct: 435 GSLLVSPTHISDAGTYTCLATNSRGADEASADLVVWARTRITRPPQDQSVIKGTQASMVC 494

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQ 384
               DP  ++++ +  G  P++   E +         + ++  V+ +   D    +    
Sbjct: 495 GVTHDP--RVTVRYSCGRSPLEARGEGQLSGVAGCWLSVHAREVSAARGGDPDLASLEGA 552

Query: 385 TELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWT 444
            +L         T+        N T  +  D    ++ +                V   +
Sbjct: 553 RQLPHAPEHPVATLSTSERRAINLTWGKPFDGNSPLIRY----------------VLEMS 596

Query: 445 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVP 504
           E +   ++    V+  E+T+  V   VPA     R+ A N    G  S+    V+    P
Sbjct: 597 ENNAPWTVLLASVDP-EATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEP 655

Query: 505 GTVQSLEAIPLGSS--AFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560
            T      I  G +  +  ++W  P     NG+L GY I+Y  + G  VG    +   I+
Sbjct: 656 PTAPPQNVIASGRTNQSIMIQWQPPPENHQNGILKGYVIRY-CLAGLPVG---YQYKNIT 711

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTP 615
           D    +  L  L   T Y I +A Y  AG G  S       L  VP   P NV    +  
Sbjct: 712 DADVNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNS 771

Query: 616 NNLVISWTA 624
             +  +W A
Sbjct: 772 TTIRFTWNA 780



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 181/679 (26%), Positives = 268/679 (39%), Gaps = 76/679 (11%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K Q V+  +   +R  ++  F      P PQ  W +DG  I PS RI+      +L+I  
Sbjct: 97  KHQSVSHGEAAVIRAPRISSF------PRPQVTWFRDGRKIPPSSRIAI-TLENTLVILS 149

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV----------LAAPYFTVEPEFINAAEEE 141
               D G Y  + V++  G+ K S  I L+V            A     +   + A   E
Sbjct: 150 TVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVSGPADPIAPAIIIPPKNTSVVAGSSE 209

Query: 142 TVTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA 199
            VT EC A+  P  ++H  W  +G  +S    +  R     R+TI N   SD G Y C A
Sbjct: 210 -VTMECVANARPLIKLHIIWKKDGVLLSSGISDYNR-----RLTIPNPAASDAGYYECEA 263

Query: 200 ---TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHN 255
              ++S+  V +  Y++VL   P+  + P+   T + + VV + CR  G P P + W  +
Sbjct: 264 VLRSSSVPSVVRGAYLSVL-EPPQFVKEPERHITAEMEKVVDIPCRAKGVPPPSITWYKD 322

Query: 256 QKELTGGRYTILET---GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHIT 311
              +  GR +       G L+I+ +   D+G   CFARN  G AQ S  L V     +IT
Sbjct: 323 AALVEVGRLSRFRQRGDGGLQISGLVPDDTGMLQCFARNAAGEAQTSTYLAVTSIAPNIT 382

Query: 312 DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVT 369
             P D  V  G S    C     P  + +I W +G   +   S   PRF      SL V+
Sbjct: 383 RGPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTLLESGSLLVS 440

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAV-VSWNP 425
            +   D+G YTC A       EA A L V         P + ++I+   A     V+ +P
Sbjct: 441 PTHISDAGTYTCLATNSRGADEASADLVVWARTRITRPPQDQSVIKGTQASMVCGVTHDP 500

Query: 426 VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNG 485
                 R   R    ++  E  GEG +  +    G   +    +   A      + +  G
Sbjct: 501 ------RVTVRYSCGRSPLEARGEGQLSGV---AGCWLSVHAREVSAARGGDPDLASLEG 551

Query: 486 AYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVK 545
           A   P +       PE    T+ + E       A  L W KP   N  L+ Y ++  S  
Sbjct: 552 ARQLPHA-------PEHPVATLSTSE-----RRAINLTWGKPFDGNSPLIRYVLE-MSEN 598

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV----- 600
                 LL  +    DP  TS  + GL P+  Y+  L      G G  SK    V     
Sbjct: 599 NAPWTVLLASV----DPEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEE 654

Query: 601 -PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
            P   P NV   G T  +++I W   PE   N     Y I +        +   ++ D  
Sbjct: 655 PPTAPPQNVIASGRTNQSIMIQWQPPPENHQNGILKGYVIRYCLAGLPVGYQYKNITDAD 714

Query: 660 QSELVLANQPTFQPYEIKV 678
            + L+L +   +  YEI+V
Sbjct: 715 VNNLLLEDLIIWTNYEIEV 733



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 105/273 (38%), Gaps = 29/273 (10%)

Query: 126 PYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
           PYF  EP       E   +   C A G    E  W+HNG+ +++               I
Sbjct: 5   PYFKTEPARTQVHLEGNRLVLTCMAEGSWPLEFKWLHNGRELTRF---------SLEYMI 55

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RVF 243
            +L ++  G Y C   N +G + +      +A+     E  K +    G+  V+   R+ 
Sbjct: 56  TSLDRTHAGFYRCIVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAAVIRAPRIS 115

Query: 244 GAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSGS 301
             P+P+V W  + +++    R  I     L I      D+G Y   A N K G  + S  
Sbjct: 116 SFPRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQP 175

Query: 302 LTVK----------EHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEPI 350
           +T+               I   P++  V AG S  T  C A + P +KL I+W +     
Sbjct: 176 ITLAVENVSGPADPIAPAIIIPPKNTSVVAGSSEVTMECVANARPLIKLHIIWKK----- 230

Query: 351 DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           D       +   +  LT+   +  D+G Y C A
Sbjct: 231 DGVLLSSGISDYNRRLTIPNPAASDAGYYECEA 263



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 11/177 (6%)

Query: 422 SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR-- 479
           +WN  SPQ + G  +GYK+  W E + E  +  +        +  V  FV   K F    
Sbjct: 777 TWNAPSPQFINGINQGYKLIAW-EPEQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYF 834

Query: 480 --VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
             VL F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY
Sbjct: 835 TSVLCFTTPGDGPRSTPQLVRTHEDVPGPVGHLSFSDVLDTSLKVSWQEPGERNGILTGY 894

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           +I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 895 RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTAKGQGQVS 946



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N   +    A +  V+W P   +S  G  +GYK+  W  +    + R   +  
Sbjct: 1587 VPTAAPRNVA-VHGPTATQLDVTWEPPPLESQNGDIQGYKIYFWEAQRRNLTERVKTLFL 1645

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E++  ++      +     V AFN A +GP S      T +  P    S+    L +++
Sbjct: 1646 AENSV-KLKNLTGYTAYMVSVAAFNAAGDGPRSTPTRGQTQQAAPSAPSSVRFSELTTTS 1704

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  PE PNGVL GY++ Y+
Sbjct: 1705 VNVSWGAPEFPNGVLEGYRLVYE 1727



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/308 (22%), Positives = 125/308 (40%), Gaps = 48/308 (15%)

Query: 366  LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 924  LTALTTYTIEVAAMTAKGQGQV----SASTISSGVPPELPGAPTNLGISN---------- 969

Query: 426  VSPQSLRGHFR-GYKVQT----WTEKD-----GEGSIRELI---VNKGESTTTEVDKFVP 472
            + P+S+   F+ GY  +T    W  +      GEG   +LI    N+ ++ + EV    P
Sbjct: 970  IGPRSVTLQFKPGYDGKTSISRWLVEAQVGMVGEGEEWQLIHQLPNEPDARSMEVPDLNP 1029

Query: 473  ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
             +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 1030 FTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTA---SETSLWLRWMPL 1086

Query: 527  PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            PE     N   +GYKIKY    G   G  L  +  + D       +  LE  T+YR  + 
Sbjct: 1087 PEMAYNGNPESVGYKIKYSRADGH--GKTLSHV--VHDRVERECTIEDLEEWTEYRAQVQ 1142

Query: 584  GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             +   G G  S  +       VP   P NV    +T +++++ W  +PE + N     Y+
Sbjct: 1143 AFNAVGSGPWSPAVMGRTRESVPSSGPTNVSALATTSSSMLVRWNEVPEADRNGLVLGYK 1202

Query: 639  IFWRRHNT 646
            + ++  ++
Sbjct: 1203 VLYKEKDS 1210



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V WN V      G   GYKV  + EKD +   R  +V  
Sbjct: 1164 VPSSGPTNVSALATTSSS-MLVRWNEVPEADRNGLVLGYKV-LYKEKDSDAPPRFWLVEG 1221

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 1222 NSSRSAQLTGLGKYVLYEIQVLAFTRIGDGGPSHPPILERTLDDVPGPPVGILFPEVRTT 1281

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    +     +E L     P+        L+P + Y
Sbjct: 1282 SVRLVWQPPAAPNGIILAYQITHRLNATSANAAAVEVL----APSARQFTATSLKPESVY 1337

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1338 LFRITAQTRKGWGEAAEAL 1356



 Score = 45.8 bits (107), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 30/201 (14%)

Query: 514  PLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSV---------------KGTKVGPL--LE 554
            P  +++  ++W  P  ++ NG+L+G++I+Y+ +                G K   L    
Sbjct: 1477 PHTTTSVLIRWQPPSEDKINGILLGFRIRYRELLYDGLRGFTLRGINNPGAKWAELTSFY 1536

Query: 555  RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES--KYLFY---VPFKNPDNVE 609
             +  +S P+ T  +L  L    +Y I ++ Y   G+G  S    +F    VP   P NV 
Sbjct: 1537 SMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSPPHEVFVGEAVPTAAPRNVA 1596

Query: 610  GRGSTPNNLVISWTAMPEIEHNAPHFKYRI-FW--RRHNTGEAWNQDDVLDWRQSELVLA 666
              G T   L ++W   P    N     Y+I FW  +R N  E   +   L   ++ + L 
Sbjct: 1597 VHGPTATQLDVTWEPPPLESQNGDIQGYKIYFWEAQRRNLTE---RVKTLFLAENSVKLK 1653

Query: 667  NQPTFQPYEIKVVQTWTEKDG 687
            N   +  Y + V       DG
Sbjct: 1654 NLTGYTAYMVSVAAFNAAGDG 1674



 Score = 39.7 bits (91), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 90/233 (38%), Gaps = 39/233 (16%)

Query: 391  EAQATLTVQV-PLEAPSNFTLIQVI--DAKKAVVSWNPVSPQSLRGHFRGYKVQ------ 441
            E++   T+Q  P EAP   T++ V        ++ W P S   + G   G++++      
Sbjct: 1455 ESEPLTTLQAAPDEAP---TIVSVTPHTTTSVLIRWQPPSEDKINGILLGFRIRYRELLY 1511

Query: 442  ----------------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNG 485
                             W E     S+R L  ++   T  E+D      +   R+  +N 
Sbjct: 1512 DGLRGFTLRGINNPGAKWAELTSFYSMRNL--SRPSLTQYELDNLNKHRRYEIRMSVYNA 1569

Query: 486  AYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLK--WVKP--EQPNGVLMGYKIKY 541
               GP S        E VP       A+  G +A  L   W  P  E  NG + GYKI +
Sbjct: 1570 VGEGPSSPPHEVFVGEAVPTAAPRNVAV-HGPTATQLDVTWEPPPLESQNGDIQGYKIYF 1628

Query: 542  QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
               +   +   ++ L ++++    S KL  L   T Y + +A +  AGDG  S
Sbjct: 1629 WEAQRRNLTERVKTL-FLAE---NSVKLKNLTGYTAYMVSVAAFNAAGDGPRS 1677


>gi|165993291|emb|CAP71957.1| nadl1.2 [Danio rerio]
          Length = 1145

 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/395 (31%), Positives = 194/395 (49%), Gaps = 27/395 (6%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIW-SKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           + L  + +EL CI  G P P   W  KDGV      R ++ +  + L  +++  +D G Y
Sbjct: 267 LVLSGQNLELECIVQGLPSPSIQWIRKDGV--LSESRTTKDSNDRVLRFQNISETDGGEY 324

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C  +N  G + +++  ++V AAPY+  EP+    A  ETV  ECKA G+P+PE+ W  N
Sbjct: 325 QCTATNPQGMS-THTYRVTVEAAPYWIKEPKSQLYAPGETVKLECKADGIPKPEVTWSIN 383

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           G  +S   P+PRR V    +T++N+  SDT  + C A +  G V  + YV V+   P+I 
Sbjct: 384 GILLSDIDPDPRRSVKHGVLTLKNVELSDTAVFQCKAASKHGSVLINAYVYVIELPPQIL 443

Query: 223 EAPKDEYTV-DGKTVVLTCRVFGAPKPEVNW--------IHNQKELTGGRYTILETGDLK 273
                 Y+V +G+T  L C  FG+P+P V W        + NQ      R   L  G L+
Sbjct: 444 TEDGLMYSVAEGQTTELACETFGSPRPNVTWEGESWGALVANQ------RMIQLSDGSLQ 497

Query: 274 ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVS 333
           I++ +  DSG+YTC   N   T   +  L V   T I   P    ++ G+ AT  C    
Sbjct: 498 ISNASLNDSGQYTCTVNNSKITI--TAELDVLNKTVIVKPPLALRIQRGKPATLTCEYQV 555

Query: 334 DPSLKL-SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
           D    L  + W + ++ +   S+      ++ +L + +  E D G YTC   T LD  +A
Sbjct: 556 DSRQDLPQVQWRKNTQKLTESSDSDKYMIDESTLIIPEVEEEDEGTYTCEVITTLDMAKA 615

Query: 393 QATLTVQVPLEAPSNFTLIQVIDAK--KAVVSWNP 425
             ++T+   ++ P   +LIQ+ + K  +  +SW P
Sbjct: 616 SGSITI---VDRPDPPSLIQMTEPKERRVTLSWTP 647



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 161/695 (23%), Positives = 269/695 (38%), Gaps = 98/695 (14%)

Query: 34  KQQYVTRKKEVALRNKKVELFC-IFGGTPLPQTIW-SKDGVPINPSDRISQGNYGKSLII 91
           K++ +T+K E     + V L C    GT  P   W  K    I  ++R+ QG  G +L  
Sbjct: 153 KEKIITKKVE---EGESVVLPCNPPNGTVAPVIHWMDKKLRHIQQNERVIQGRDG-NLYF 208

Query: 92  KHVEFSD-QGSYTCEV----SNGVGEAKSYSIDLSVLAAPYFTVEPEFIN---------A 137
            H   +D +  YTC +    +  +   +   + +S   +      P+ +           
Sbjct: 209 SHATVADSRDDYTCNIQFPSARVIKLKEPIKLTVSSSNSVVRNRRPQMMRPTGPSSSYLV 268

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
              + +  EC   GLP P I W+     +S++     +      +  +N+ ++D G Y C
Sbjct: 269 LSGQNLELECIVQGLPSPSIQWIRKDGVLSES--RTTKDSNDRVLRFQNISETDGGEYQC 326

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK 257
            ATN  G       V V A AP   + PK +    G+TV L C+  G PKPEV W  N  
Sbjct: 327 TATNPQGMSTHTYRVTVEA-APYWIKEPKSQLYAPGETVKLECKADGIPKPEVTWSINGI 385

Query: 258 ELTG----GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
            L+      R ++ + G L + +V  +D+  + C A +K       GS+ +  + ++ + 
Sbjct: 386 LLSDIDPDPRRSV-KHGVLTLKNVELSDTAVFQCKAASK------HGSVLINAYVYVIEL 438

Query: 314 P-----ED---YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           P     ED   Y V  GQ+    C     P  + ++ W  G       +  R +Q +D S
Sbjct: 439 PPQILTEDGLMYSVAEGQTTELACETFGSP--RPNVTW-EGESWGALVANQRMIQLSDGS 495

Query: 366 LTVTKSSELDSGQYTCRAQ-------TELDFIEAQATLTVQVPLE------APSNFTLIQ 412
           L ++ +S  DSGQYTC           ELD +    T+ V+ PL        P+  T   
Sbjct: 496 LQISNASLNDSGQYTCTVNNSKITITAELDVL--NKTVIVKPPLALRIQRGKPATLTCEY 553

Query: 413 VIDAKKAV--VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKF 470
            +D+++ +  V W                 Q  TE        + ++++      EV++ 
Sbjct: 554 QVDSRQDLPQVQWR-------------KNTQKLTESSDSD---KYMIDESTLIIPEVEEE 597

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
              +     +   + A     S  I+ V     P  +Q  E          L W      
Sbjct: 598 DEGTYTCEVITTLDMAKA---SGSITIVDRPDPPSLIQMTEP---KERRVTLSWTPGADH 651

Query: 531 NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGD 590
           N  ++ Y I+++     +     E L  +S  ++  A L  L+P   Y   +    + G 
Sbjct: 652 NSPVLEYLIEFEETGSDRKE--WEELSRVSG-SSQRATLP-LKPFISYHFRVIAINEIGK 707

Query: 591 GAESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR- 643
              S            P  NP+ V      P  LVI+W  M     N P F Y++ WR+ 
Sbjct: 708 SDPSMVTEAYSTPAAPPDSNPEGVRSDSDEPGTLVITWKEMDRRSFNGPDFHYKVMWRKV 767

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
             +G +W+  D+        V+ +   F  ++IKV
Sbjct: 768 LGSGPSWHTKDIT---SPPFVVTDVGNFSAFDIKV 799



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 136/288 (47%), Gaps = 22/288 (7%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIRELIVNK 459
            PLEAP +  LI +I++    V+W  V+ +++RG  +GYK+  T+    G+   RE     
Sbjct: 823  PLEAPLDVGLI-LINSTAIKVTWAAVNRETVRGRLQGYKIYLTYLGPKGQHLRREPKTTF 881

Query: 460  GESTTTEVDKFV-----PASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
              +T +  +K V     P S     V  FN    GP SE I F TPEGVPG   SL    
Sbjct: 882  VVTTDSNEEKKVLGDLQPFSHYNLAVSVFNYKGEGPQSESILFFTPEGVPGPPSSLMLDS 941

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
               +   + W  P QPNG L+GY +++Q +        L ++  ISDPT +  KL  L+P
Sbjct: 942  PSETEMTVHWTPPNQPNGNLIGYILQHQQLDNDAS---LMQVVKISDPTASHYKLK-LDP 997

Query: 575  STKYRIHLAGYTKAGDGA---ESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHN 631
             ++YR +L GYT  G+G    +       P    D     G T  NL  +W +  E + N
Sbjct: 998  HSRYRFYLRGYTAIGEGLPIIKDGATTLDPVPPSDISISTGETSVNL--TWVSK-ERQRN 1054

Query: 632  APHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN-QPTFQPYEIKV 678
               F   I + R +  + W + + ++  QS   L   QP  Q Y +K+
Sbjct: 1055 VEFF---IHYLRKDGPDKWEKSEKVNSTQSFYTLHGLQPGSQ-YRLKI 1098



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 148/362 (40%), Gaps = 33/362 (9%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSD----RISQGNYGKSLIIKHVEFSD-QGSYTCE 105
           + L C   G P P   W KDGV  +PS      +S+ +   SL  K       QG Y C 
Sbjct: 69  ITLTCDATGNPPPTFRWVKDGVEFDPSKDPDLSVSRDSGTFSLTAKDGPIHQYQGRYNCY 128

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEE-ETVTFECK-ASGLPEPEIHWVHNG 163
            SN +G A S    +     P    E       EE E+V   C   +G   P IHW+   
Sbjct: 129 ASNELGTAVSNEARIVTENTPTLQKEKIITKKVEEGESVVLPCNPPNGTVAPVIHWMD-- 186

Query: 164 KPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNATNSLGYVYK-----DVYVN--- 213
           K +     N R   G +  +   +   +D+  +Y CN       V K      + V+   
Sbjct: 187 KKLRHIQQNERVIQGRDGNLYFSHATVADSRDDYTCNIQFPSARVIKLKEPIKLTVSSSN 246

Query: 214 --VLAHAPEITE--APKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE 268
             V    P++     P   Y V  G+ + L C V G P P + WI     L+  R T  +
Sbjct: 247 SVVRNRRPQMMRPTGPSSSYLVLSGQNLELECIVQGLPSPSIQWIRKDGVLSESR-TTKD 305

Query: 269 TGD--LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
           + D  L+  +++  D GEY C A N  G +  +  +TV+   +   +P+      G++  
Sbjct: 306 SNDRVLRFQNISETDGGEYQCTATNPQGMSTHTYRVTVEAAPYWIKEPKSQLYAPGETVK 365

Query: 327 FRCNAVSDPSLKLSIVW-LRGSEPIDFESEPRFVQSNDYSLTVTKSSEL-DSGQYTCRAQ 384
             C A   P  K  + W + G    D + +PR  +S  + +   K+ EL D+  + C+A 
Sbjct: 366 LECKADGIP--KPEVTWSINGILLSDIDPDPR--RSVKHGVLTLKNVELSDTAVFQCKAA 421

Query: 385 TE 386
           ++
Sbjct: 422 SK 423



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 120/306 (39%), Gaps = 35/306 (11%)

Query: 124 AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           + P  T +P+ +     + +T  C A+G P P   WV +G     +  +P   V  +  T
Sbjct: 50  SPPVITAQPKSVTTFSADDITLTCDATGNPPPTFRWVKDGVEFDPS-KDPDLSVSRDSGT 108

Query: 184 IENLRKSD-----TGNYGCNATNSLGYVYKDVYVNVLAHAPEIT-EAPKDEYTVDGKTVV 237
                K        G Y C A+N LG    +    V  + P +  E    +   +G++VV
Sbjct: 109 FSLTAKDGPIHQYQGRYNCYASNELGTAVSNEARIVTENTPTLQKEKIITKKVEEGESVV 168

Query: 238 LTCR-VFGAPKPEVNWIHNQKELTGGRYTILE--TGDLKITDVAFADS-GEYTC---FAR 290
           L C    G   P ++W+  +         +++   G+L  +    ADS  +YTC   F  
Sbjct: 169 LPCNPPNGTVAPVIHWMDKKLRHIQQNERVIQGRDGNLYFSHATVADSRDDYTCNIQFPS 228

Query: 291 NKLGTAQGSGSLTVKEHTHI-----------TDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
            ++   +    LTV     +           T     Y V +GQ+    C     PS   
Sbjct: 229 ARVIKLKEPIKLTVSSSNSVVRNRRPQMMRPTGPSSSYLVLSGQNLELECIVQGLPS--P 286

Query: 340 SIVWLRGSEPIDFESEPRFVQ-SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           SI W+R    +   SE R  + SND  L     SE D G+Y C A       +  +T T 
Sbjct: 287 SIQWIRKDGVL---SESRTTKDSNDRVLRFQNISETDGGEYQCTATNP----QGMSTHTY 339

Query: 399 QVPLEA 404
           +V +EA
Sbjct: 340 RVTVEA 345



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 83/198 (41%), Gaps = 17/198 (8%)

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK 257
           N T ++   YK   +  L   P IT  PK   T     + LTC   G P P   W+ +  
Sbjct: 34  NTTINIPSRYK---IRDLKSPPVITAQPKSVTTFSADDITLTCDATGNPPPTFRWVKDGV 90

Query: 258 ELTGGRYTIL----ETGDLKITDV---AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
           E    +   L    ++G   +T          G Y C+A N+LGTA  + +  V E+T  
Sbjct: 91  EFDPSKDPDLSVSRDSGTFSLTAKDGPIHQYQGRYNCYASNELGTAVSNEARIVTENTP- 149

Query: 311 TDQPEDY---EVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
           T Q E     +VE G+S    CN   + ++   I W+   +    +   R +Q  D +L 
Sbjct: 150 TLQKEKIITKKVEEGESVVLPCNP-PNGTVAPVIHWM-DKKLRHIQQNERVIQGRDGNLY 207

Query: 368 VTKSSELDS-GQYTCRAQ 384
            + ++  DS   YTC  Q
Sbjct: 208 FSHATVADSRDDYTCNIQ 225


>gi|213982949|ref|NP_001135636.1| contactin 4 precursor [Xenopus (Silurana) tropicalis]
 gi|197246317|gb|AAI68488.1| Unknown (protein for MGC:172944) [Xenopus (Silurana) tropicalis]
          Length = 1028

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 187/724 (25%), Positives = 294/724 (40%), Gaps = 97/724 (13%)

Query: 47  RNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           +   V+L C   G P+P   W + DG PI  S ++ +      L I + +  D G Y C 
Sbjct: 240 KGSTVKLECFALGNPVPTITWRRADGKPI--SRKVRRHRSSGVLEIPNFQQEDAGPYECV 297

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             N  G+       L+  A P +  +    + A EE + +ECKASG P+    W+ NG+ 
Sbjct: 298 AENTRGKNMVRG-QLTYFAPPTWVQKINDAHIAIEENILWECKASGRPKASYTWLKNGQR 356

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +       R ++    +TI ++  SD+G Y C A N  G +Y    + V+A  P+ ++  
Sbjct: 357 LQS---KGRLQIDHGSLTITSVNISDSGMYQCLAENKHGTIYSSAELRVIAVGPDFSKGF 413

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELT--GGRYTILETGDLKITDVAFAD 281
               T+   G +V++ C+   +PKP + W    KEL     R +IL+ G LKI+++  AD
Sbjct: 414 VKRVTLGKVGGSVLIECKPKASPKPSITW-KKGKELQRESSRISILDDGTLKISNLTKAD 472

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +G YTC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +S 
Sbjct: 473 AGSYTCTASNHFGTASSTGTLVVKDPTQVLVPPSSMDVTVGESIVLPCQVSHDHSLDISF 532

Query: 342 VWLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W+   + IDF+ +         Q +   L +       +G+Y C   T +D + A A L
Sbjct: 533 SWVFNGQLIDFQKDGEHFERVGGQDSAGDLMIRSIQLKHAGKYICLVHTSVDKLSAGADL 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEK----DGEG 450
            V+ P   P   T+ ++ D   A +SW P     +  H     Y VQ  T          
Sbjct: 593 IVRGPPGPPDALTVEEITDT-TAQLSWMP----GVDNHSPIIMYSVQARTPFSVGWQAVS 647

Query: 451 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTPE 501
           ++ E++   G S T  V    P  +   RV+A N    G PS         E +  VTP 
Sbjct: 648 TVPEVV--DGRSFTATVVGLSPWVEYEFRVIAINEIGIGEPSPPSDKRRTEEALPEVTPA 705

Query: 502 GVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
            V G   S            + W  V  E  NG   GY + ++          ++ +   
Sbjct: 706 NVSGGGGS-------KGELVITWEPVPEELQNGGGFGYVVAFRPFGTIS---WMQTVVAS 755

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGST 614
           +D +    +   L P + Y + +  Y   G+G  S           P + P  V  R  T
Sbjct: 756 ADSSRYVYRNESLPPFSPYEVKVGVYNNRGEGPFSPLTVVYSAEEEPGRAPAGVFSRSLT 815

Query: 615 PNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPY 674
             ++ +SW A+P         K RI                                Q Y
Sbjct: 816 AWDIEVSWIAVP-----GSLSKGRI--------------------------------QGY 838

Query: 675 EIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 734
           E++    W + + E + R+L    G  T+T++      +     V A+N A  GP S  +
Sbjct: 839 EVRY---WKQNEKEQNARKL-RTLGNQTSTKLSHLQGHTLYHLNVRAYNSAGTGPASTTV 894

Query: 735 SFVT 738
           +  T
Sbjct: 895 NVTT 898



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 167/629 (26%), Positives = 250/629 (39%), Gaps = 67/629 (10%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSY--SIDLSVLA-------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   +    S  L++          P   V  PE + +
Sbjct: 179 NLYIAKVEPSDAGNYTCVVTNTVTNTRELGPSTPLTLRTDGVMGEYEPKIEVHFPESVPS 238

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   +GKPIS+     RR      + I N ++ D G Y 
Sbjct: 239 AKGSTVKLECFALGNPVPTITWRRADGKPISR---KVRRHRSSGVLEIPNFQQEDAGPYE 295

Query: 197 CNATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           C A N+ G   K++    L +   P   +   D +    + ++  C+  G PK    W+ 
Sbjct: 296 CVAENTRG---KNMVRGQLTYFAPPTWVQKINDAHIAIEENILWECKASGRPKASYTWLK 352

Query: 255 NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
           N + L       ++ G L IT V  +DSG Y C A NK GT   S  L V     I   P
Sbjct: 353 NGQRLQSKGRLQIDHGSLTITSVNISDSGMYQCLAENKHGTIYSSAELRV-----IAVGP 407

Query: 315 EDYE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
           +  +         + G S    C   + P  K SI W +G E +  ES  R    +D +L
Sbjct: 408 DFSKGFVKRVTLGKVGGSVLIECKPKASP--KPSITWKKGKE-LQRESS-RISILDDGTL 463

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPV 426
            ++  ++ D+G YTC A        +  TL V+ P +     + + V   +  V+     
Sbjct: 464 KISNLTKADAGSYTCTASNHFGTASSTGTLVVKDPTQVLVPPSSMDVTVGESIVLPCQVS 523

Query: 427 SPQSLRGHFRGYKVQTWT--------EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFA 478
              SL   F      +W         +KDGE   R    +          +   A K   
Sbjct: 524 HDHSLDISF------SWVFNGQLIDFQKDGEHFERVGGQDSAGDLMIRSIQLKHAGKYIC 577

Query: 479 RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
            V       +     I+      G PG   +L    +  +   L W+     +  ++ Y 
Sbjct: 578 LVHTSVDKLSAGADLIV-----RGPPGPPDALTVEEITDTTAQLSWMPGVDNHSPIIMYS 632

Query: 539 IKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES--- 594
           +  Q+     VG   +  +P + D  + +A + GL P  +Y   +    + G G  S   
Sbjct: 633 V--QARTPFSVGWQAVSTVPEVVDGRSFTATVVGLSPWVEYEFRVIAINEIGIGEPSPPS 690

Query: 595 ---KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWN 651
              +    +P   P NV G G +   LVI+W  +PE   N   F Y + +R   T  +W 
Sbjct: 691 DKRRTEEALPEVTPANVSGGGGSKGELVITWEPVPEELQNGGGFGYVVAFRPFGT-ISWM 749

Query: 652 QDDVLDWRQSELVLANQ--PTFQPYEIKV 678
           Q  V     S  V  N+  P F PYE+KV
Sbjct: 750 QTVVASADSSRYVYRNESLPPFSPYEVKV 778



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 122/293 (41%), Gaps = 38/293 (12%)

Query: 119 DLSVLAAPYFTVEPEFIN---AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D   L  P FT EP  IN    +E+ T+   C+  G P+P + W  NG  + +A     R
Sbjct: 18  DELTLQGPVFTQEPPNINFPLDSEDRTLRLVCEVQGHPKPVVRWRVNGTLMDEAQDYRYR 77

Query: 176 KVGPNRITIENLRKSDTGNYGCNATNSLGYVY-KDVYVNVLAHAPEITEAPKDEYTV-DG 233
            +  + I     R  D G + C ATNSLG +  ++ YV   ++        +   +V +G
Sbjct: 78  VLDRSLIIASPDRNRDVGTFQCEATNSLGTILSREAYVQ-FSYLDSFQTRTRSTVSVREG 136

Query: 234 KTVVLTCRVFGAPKPE----VNWIHNQK----ELTGGRYTILETGDLKITDVAFADSGEY 285
           + +VL C   G P         WI N+     +    R+    TG+L I  V  +D+G Y
Sbjct: 137 QGMVLLC---GPPAHSGELVYAWIFNEYPPFVQQDNRRFVSQVTGNLYIAKVEPSDAGNY 193

Query: 286 TCFARNKLGTAQGSG---SLTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSD 334
           TC   N +   +  G    LT++    + +         PE      G +    C A+ +
Sbjct: 194 TCVVTNTVTNTRELGPSTPLTLRTDGVMGEYEPKIEVHFPESVPSAKGSTVKLECFALGN 253

Query: 335 PSLKLSIVWLRGS-EPIDFESEPRFVQSNDYS--LTVTKSSELDSGQYTCRAQ 384
           P    +I W R   +PI      R V+ +  S  L +    + D+G Y C A+
Sbjct: 254 PV--PTITWRRADGKPIS-----RKVRRHRSSGVLEIPNFQQEDAGPYECVAE 299


>gi|253314410|ref|NP_001156578.1| neural cell adhesion molecule L1-like protein precursor [Danio
           rerio]
 gi|189313742|gb|ACD88870.1| camel [Danio rerio]
          Length = 1154

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 162/607 (26%), Positives = 259/607 (42%), Gaps = 53/607 (8%)

Query: 47  RNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           + +++EL CI  G P P+  W K  +  +   R    N+GK L I ++   D+G Y C+ 
Sbjct: 258 KGEELELECIAEGLPTPEVEWIK--IWGDLPKRTQIKNFGKLLTIPNIREEDEGKYMCKA 315

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAE-EETVTFECKASGLPEPEIHWVHNGKP 165
            N  GE   +   + V   P +  EP     A     +   C A+G P+P I W  NGKP
Sbjct: 316 KNQHGE-DVHHFQVEVEEPPSWQKEPLKSQLAWIGSDIHINCSATGKPQPTITWKRNGKP 374

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +   P +   K+  +RI I    + DT  Y C A+N  G +  +  V V+ H P I    
Sbjct: 375 LDDFP-STHHKMLDDRIIILKAEQKDTAVYQCEASNKHGSLLANANVLVMNHPPLILTRN 433

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFADS 282
             EY T+ GK+V++ C VF +P   +NW     E  + G RY++L+ G L+I  V   D 
Sbjct: 434 YLEYATMLGKSVIMDCNVFSSPPATLNWRREDPEGSVDGERYSLLKNGSLQIHKVEMEDM 493

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G+Y C A N  G+A  +  L +K+ T I + P+D +V  G  A   C    DPSL+  L 
Sbjct: 494 GQYKCLANNSEGSASITTELFIKDSTRIVEAPQDMKVIRGSVAELECQVECDPSLRRELE 553

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
            VWL+    I   S  R+  +++  L +   S  D G YTC  +T LD   A A +TV  
Sbjct: 554 FVWLKDGINILSNSSERYF-TDEGILQIFNVSHSDQGNYTCIVRTSLDQDTASAYITV-- 610

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            L+ P     + + D K   V  + V+          + +Q           ++L+    
Sbjct: 611 -LDVPDPPVELLLSDLKDRSVKLHWVNTSDHNSPITEFIIQYEESHWEPEKWKDLLRVSS 669

Query: 461 ESTTTEVDKFVPASKNFARVLAFN-----------GAYNGPPSEIISFVTPEGVPGTVQS 509
              +  +  +   +  F RV+A N           G Y  PP        P+  P  ++ 
Sbjct: 670 RKFSAPLALYCHINYQF-RVIAVNEIGRSHPSMPSGRYKTPP------CAPDRNPENIKI 722

Query: 510 LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISDPTTT 565
              +P       + W  + P + NG  + YK+ Y+   V+ +    +++R  ++   T T
Sbjct: 723 EGHLP---HQMDISWEPLLPVEHNGPGLEYKLSYRLLGVEDSWKEQMVKRHSFVVRDTPT 779

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVI 620
                       Y + +  + + G     K +       +P   PDNV         L +
Sbjct: 780 FV---------PYEVKIQAFNRHGWAPGPKVVTGYSGEDLPLVAPDNVSAEVLNSTLLKV 830

Query: 621 SWTAMPE 627
           SW+ +P+
Sbjct: 831 SWSPVPQ 837



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 132/567 (23%), Positives = 222/567 (39%), Gaps = 56/567 (9%)

Query: 134 FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTG 193
           F+   EE  +  EC A GLP PE+ W+   K     P   + K     +TI N+R+ D G
Sbjct: 255 FLKKGEE--LELECIAEGLPTPEVEWI---KIWGDLPKRTQIKNFGKLLTIPNIREEDEG 309

Query: 194 NYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWI 253
            Y C A N  G       V V        E  K +    G  + + C   G P+P + W 
Sbjct: 310 KYMCKAKNQHGEDVHHFQVEVEEPPSWQKEPLKSQLAWIGSDIHINCSATGKPQPTITWK 369

Query: 254 HNQKELTGGRYTILETGDLKITDVAF--ADSGEYTCFARNKLGTAQGSGSLTVKEH--TH 309
            N K L     T  +  D +I  +     D+  Y C A NK G+   + ++ V  H    
Sbjct: 370 RNGKPLDDFPSTHHKMLDDRIIILKAEQKDTAVYQCEASNKHGSLLANANVLVMNHPPLI 429

Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
           +T    +Y    G+S    CN  S P   L+  W R       + E R+    + SL + 
Sbjct: 430 LTRNYLEYATMLGKSVIMDCNVFSSPPATLN--WRREDPEGSVDGE-RYSLLKNGSLQIH 486

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQ 429
           K    D GQY C A       E  A++T ++ ++  +     ++++A        P   +
Sbjct: 487 KVEMEDMGQYKCLANNS----EGSASITTELFIKDST-----RIVEA--------PQDMK 529

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
            +RG     + Q   +      +  + +  G +  +   +     +   ++   + +  G
Sbjct: 530 VIRGSVAELECQVECDPSLRRELEFVWLKDGINILSNSSERYFTDEGILQIFNVSHSDQG 589

Query: 490 PPSEII----------SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKI 539
             + I+          +++T   VP     L    L   +  L WV     N  +  + I
Sbjct: 590 NYTCIVRTSLDQDTASAYITVLDVPDPPVELLLSDLKDRSVKLHWVNTSDHNSPITEFII 649

Query: 540 KYQSV--KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES--- 594
           +Y+    +  K   LL            SA LA L     Y+  +    + G    S   
Sbjct: 650 QYEESHWEPEKWKDLLR-----VSSRKFSAPLA-LYCHINYQFRVIAVNEIGRSHPSMPS 703

Query: 595 ---KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWN 651
              K     P +NP+N++  G  P+ + ISW  +  +EHN P  +Y++ +R     ++W 
Sbjct: 704 GRYKTPPCAPDRNPENIKIEGHLPHQMDISWEPLLPVEHNGPGLEYKLSYRLLGVEDSWK 763

Query: 652 QDDVLDWRQSELVLANQPTFQPYEIKV 678
           +  V   ++   V+ + PTF PYE+K+
Sbjct: 764 EQMV---KRHSFVVRDTPTFVPYEVKI 787



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 128/592 (21%), Positives = 225/592 (38%), Gaps = 49/592 (8%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P  Q    K ++A     + + C   G P P   W ++G P++             +II 
Sbjct: 334 PSWQKEPLKSQLAWIGSDIHINCSATGKPQPTITWKRNGKPLDDFPSTHHKMLDDRIIIL 393

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEE--ETVTFECKAS 150
             E  D   Y CE SN  G   + + ++ V+  P   +   ++  A    ++V  +C   
Sbjct: 394 KAEQKDTAVYQCEASNKHGSLLA-NANVLVMNHPPLILTRNYLEYATMLGKSVIMDCNVF 452

Query: 151 GLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDV 210
             P   ++W     P           +    + I  +   D G Y C A NS G      
Sbjct: 453 SSPPATLNW-RREDPEGSVDGERYSLLKNGSLQIHKVEMEDMGQYKCLANNSEGSASITT 511

Query: 211 YVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAP-----------KPEVNWIHNQKEL 259
            +  +  +  I EAP+D   + G    L C+V   P           K  +N + N  E 
Sbjct: 512 EL-FIKDSTRIVEAPQDMKVIRGSVAELECQVECDPSLRRELEFVWLKDGINILSNSSE- 569

Query: 260 TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEV 319
              RY   + G L+I +V+ +D G YTC  R  L     S  +TV +   + D P +  +
Sbjct: 570 ---RY-FTDEGILQIFNVSHSDQGNYTCIVRTSLDQDTASAYITVLD---VPDPPVELLL 622

Query: 320 EAGQSATFRCNAV-----SDPSLKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSE 373
              +  + + + V     + P  +  I +     EP  ++   R V S  +S  +     
Sbjct: 623 SDLKDRSVKLHWVNTSDHNSPITEFIIQYEESHWEPEKWKDLLR-VSSRKFSAPLALYCH 681

Query: 374 LDSGQYTCRAQTEL-----DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
           ++  Q+   A  E+          +       P   P N   I+     +  +SW P+ P
Sbjct: 682 INY-QFRVIAVNEIGRSHPSMPSGRYKTPPCAPDRNPENIK-IEGHLPHQMDISWEPLLP 739

Query: 429 QSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
               G    YK+ ++     E S +E +V +      +   FVP      ++ AFN    
Sbjct: 740 VEHNGPGLEYKL-SYRLLGVEDSWKEQMVKRHSFVVRDTPTFVPYE---VKIQAFNRHGW 795

Query: 489 GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKY---Q 542
            P  ++++  + E +P     ++ A  L S+   + W    Q    G L GY + Y   Q
Sbjct: 796 APGPKVVTGYSGEDLPLVAPDNVSAEVLNSTLLKVSWSPVPQTTLRGHLGGYTVNYWQTQ 855

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           S+  +K  P  ER         +   + GL+P ++Y + +  + + G+G ++
Sbjct: 856 SLLTSKKIP-SERQSLTIPGNRSHTMVPGLKPFSEYSLTVNVFNRRGNGPQA 906



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 8/199 (4%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSI-----RE 454
            +PL AP N +  +V+++    VSW+PV   +LRGH  GY V  W  +    S      R+
Sbjct: 810  LPLVAPDNVS-AEVLNSTLLKVSWSPVPQTTLRGHLGGYTVNYWQTQSLLTSKKIPSERQ 868

Query: 455  LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT-PEGVPGTVQSLEAI 513
             +   G  + T V    P S+    V  FN   NGP + + S     +GVP    +L+A 
Sbjct: 869  SLTIPGNRSHTMVPGLKPFSEYSLTVNVFNRRGNGPQAAVPSLSQLHKGVPEQPHNLKAT 928

Query: 514  PLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLE 573
                 A  L W  P + NG L GY ++YQ+V   +    L  +  IS   TT   L  L+
Sbjct: 929  NFQKDAITLVWAPPHETNGHLTGYLLQYQTVVDNETLGELNSV-NISGADTTQWVLRDLQ 987

Query: 574  PSTKYRIHLAGYTKAGDGA 592
                Y+ +L+  T+ G G+
Sbjct: 988  EDNSYKFYLSACTQVGCGS 1006



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 105/432 (24%), Positives = 164/432 (37%), Gaps = 50/432 (11%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDR---ISQGNYGKSLII-KHVEFSDQGSYTCEVSNGV 110
           C   G P P   W+KDG+  +P       ++ N G   I  K  +   QG Y C  SN +
Sbjct: 55  CEAKGNPRPTFRWTKDGMDFDPHKDPQVTTEENTGTFEIPNKKDKVKYQGKYRCYASNKL 114

Query: 111 GEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVHNGKPISQ 168
           G A S   +  V   P F  E  E I   E ++V  EC    G+P  +++W+ N   +  
Sbjct: 115 GTATSEEAEFIVPMVPKFPKEKIEPIVVTEGDSVVLECNPPQGIPPWQLYWMTND--LRH 172

Query: 169 APPNPRRKVG-PNRITIENLRKSDT-GNYGCNAT-----------------NSLGYVYKD 209
              N R  +G    +   N   SD+  +Y C A+                   +    +D
Sbjct: 173 IEQNERVSMGLSGNLYFSNTLVSDSHDDYCCFASFFKIRTIVQKPRMVLKVKPVDAKQED 232

Query: 210 VYVNVLAHAPEITEAPKDEYTV---DGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
               ++         P    T     G+ + L C   G P PEV WI    +L   R  I
Sbjct: 233 GDAKIVQERKPSILVPSSHSTTFLKKGEELELECIAEGLPTPEVEWIKIWGDLP-KRTQI 291

Query: 267 LETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE-AGQS 324
              G  L I ++   D G+Y C A+N+ G       + V+E      +P   ++   G  
Sbjct: 292 KNFGKLLTIPNIREEDEGKYMCKAKNQHGEDVHHFQVEVEEPPSWQKEPLKSQLAWIGSD 351

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
               C+A   P  + +I W R  +P+D          +D  + + K+ + D+  Y C A 
Sbjct: 352 IHINCSATGKP--QPTITWKRNGKPLDDFPSTHHKMLDD-RIIILKAEQKDTAVYQCEAS 408

Query: 385 TELDFIEAQATLTV--QVPLEAPSNFTLIQVIDAKKAVVSWNPVS--PQSLRGHFRGYKV 440
            +   + A A + V    PL    N+     +  K  ++  N  S  P +L         
Sbjct: 409 NKHGSLLANANVLVMNHPPLILTRNYLEYATMLGKSVIMDCNVFSSPPATL--------- 459

Query: 441 QTWTEKDGEGSI 452
             W  +D EGS+
Sbjct: 460 -NWRREDPEGSV 470



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 126/320 (39%), Gaps = 56/320 (17%)

Query: 121 SVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN 180
           +++A PY            +E   F+C+A G P P   W  +G        +P+     N
Sbjct: 41  TIIALPY------------DERYIFKCEAKGNPRPTFRWTKDGMDFDPH-KDPQVTTEEN 87

Query: 181 RITIENLRKSD----TGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKT 235
             T E   K D     G Y C A+N LG    +    ++   P+  +   +   V +G +
Sbjct: 88  TGTFEIPNKKDKVKYQGKYRCYASNKLGTATSEEAEFIVPMVPKFPKEKIEPIVVTEGDS 147

Query: 236 VVLTCR-VFGAPKPEVNWIHNQKELT--GGRYTILETGDLKITDVAFADS-GEYTCFAR- 290
           VVL C    G P  ++ W+ N         R ++  +G+L  ++   +DS  +Y CFA  
Sbjct: 148 VVLECNPPQGIPPWQLYWMTNDLRHIEQNERVSMGLSGNLYFSNTLVSDSHDDYCCFASF 207

Query: 291 NKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF--RCNAVSDPSLKLSIVWLRGSE 348
            K+ T      + +K       +P D + E G +     R  ++  PS   S  +L+  E
Sbjct: 208 FKIRTIVQKPRMVLKV------KPVDAKQEDGDAKIVQERKPSILVPS-SHSTTFLKKGE 260

Query: 349 PIDFES------------------EPRFVQSNDYS--LTVTKSSELDSGQYTCRAQTELD 388
            ++ E                    P+  Q  ++   LT+    E D G+Y C+A+ +  
Sbjct: 261 ELELECIAEGLPTPEVEWIKIWGDLPKRTQIKNFGKLLTIPNIREEDEGKYMCKAKNQ-- 318

Query: 389 FIEAQATLTVQVPLEAPSNF 408
               +     QV +E P ++
Sbjct: 319 --HGEDVHHFQVEVEEPPSW 336


>gi|348552762|ref|XP_003462196.1| PREDICTED: neural cell adhesion molecule L1-like isoform 3 [Cavia
           porcellus]
          Length = 1247

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 143/474 (30%), Positives = 215/474 (45%), Gaps = 25/474 (5%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W     P+ P+DRI+  N+ K+L +  V   D G Y 
Sbjct: 247 VALQGQPLVLECIAEGFPTPTIKWLLPSGPM-PADRITYQNHNKTLQLLSVGEQDDGEYH 305

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ +   ++V AAP +  +P+       ET   +C+A G P+PEI W  NG
Sbjct: 306 CLAENSLGTAR-HVYYVTVEAAPDWLHKPKSGLYGPGETARLDCQAQGRPQPEITWRING 364

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             + +   + + ++    + + N++  DT    C A N  G++  + Y+ V+    +I  
Sbjct: 365 NRMEELDKDQKYQIHRGALILSNVQPGDTMVTQCEARNRHGHLLANAYIYVVQLPAKILT 424

Query: 224 APKDEYT-VDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
                Y  V G+T  L C+ FGAP P V W+  +    L   R+     G L I D+   
Sbjct: 425 VDNQTYMGVAGRTAYLLCKAFGAPVPSVQWLDEEGTTVLRDERFFPYANGTLAIRDLQAN 484

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N    A    +L VKE T IT  P +   + G  ATF C A  DPSL+ S
Sbjct: 485 DTGRYFCQAANDQNNATIVANLQVKEATQITQGPREAIEKKGSRATFTCQASFDPSLRPS 544

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           + W      +    +S+  F+  +D  L +      D G Y+C A TELD +EA+A L V
Sbjct: 545 LTWRGDGRDLQELGDSDKYFI--DDGRLVIDNLEYGDQGNYSCVASTELDEVEARAQLLV 602

Query: 399 QVPLEAPSNFTLIQV-----IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
              + +P     ++V     +   +  +SW P   +        Y ++   ++       
Sbjct: 603 ---VGSPGPVPHVEVSERHLLKHSQVHLSWTPA--EDHNAAIEKYDIEFEDKEMAPEKWH 657

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG---PPSEIISFVTPEGVP 504
            L    G  T+T + K  P      RV A N    G   PPSE +  VTPE  P
Sbjct: 658 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPPSETV--VTPEAAP 708



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 134/312 (42%), Gaps = 35/312 (11%)

Query: 403  EAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG------EGSIRELI 456
            +A      ++ +++  ++VSW PV+   ++GH RGY V  W + DG      E    + +
Sbjct: 807  QASPELEKVKALNSTASLVSWKPVALAQVKGHLRGYNVTYWWQ-DGQRMHGKEHGYGKHV 865

Query: 457  VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLG 516
            V     T+  +    P S     V AFNG   GP S+  SF TPEGVPG  ++L      
Sbjct: 866  VVPANVTSVALSDLWPYSSYHVEVRAFNGRGAGPASKE-SFETPEGVPGHPEALHLECQS 924

Query: 517  SSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPST 576
            +++  L W  P   NGVL GY + Y  +       L   LP   DP   +  L  L P  
Sbjct: 925  ATSLQLHWKPPLSHNGVLTGYMLSYHPLDAGGEQQLSFPLP---DPEMRTHNLTNLSPDL 981

Query: 577  KYRIHLAGYTKAGDG------AESKYLFYVP-FKNPDNVEGRGSTPNNLVISWTAMPEIE 629
            +YR  L   T+ G G        +  L   P F N   + G     N  V+SW      +
Sbjct: 982  RYRFQLQATTRKGPGEAIVREGGTMNLSGKPDFGNISAMAGE----NYSVVSWVP----K 1033

Query: 630  HNAPHFKYRIFWRRHNTGEAWN--QDDVLDWRQSELVLANQPTFQPYEIKVV-------Q 680
                +F++RI ++    G+  +  Q + + + QS     N      YEI+++       Q
Sbjct: 1034 EGQCNFRFRILFKPLGEGKVSSDLQPEYVSYNQSSYTQWNLQPDTYYEIRLLREHTLLGQ 1093

Query: 681  TWTEKDGEGSIR 692
            T  + +G G +R
Sbjct: 1094 TNVKTNGTGRVR 1105



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 159/386 (41%), Gaps = 35/386 (9%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS-----QGNYGKSLIIKHVEFSD 98
           V      + L C   G P  Q  W KDGV   PS+ +        + G   I  +  F+ 
Sbjct: 41  VVFPTDDISLKCEARGKPEVQFRWMKDGVHFRPSEELGVTVHETPHSGSFTITGNNSFAQ 100

Query: 99  --QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKASGLP 153
             QG Y C  SN +G A S+ I L    AP +    V+P      E E+V   C      
Sbjct: 101 RFQGVYRCFASNQLGTAMSHEIQLMAEGAPKWPKEMVKPV--EVEERESVVLPCNPPPSA 158

Query: 154 EP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLGYVYK 208
           EP  I+W+++   I     + R  +G N  +   N+  SD+  +Y CNA    +   + K
Sbjct: 159 EPLRIYWMNSK--ILHIKQDERVSMGQNGNLYFANVLISDSHSDYICNAHFPGTRTIIQK 216

Query: 209 D-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIHNQKE 258
           + + + V A    I   P+  +          + G+ +VL C   G P P + W+     
Sbjct: 217 EPIDLRVKATNTMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLLPSGP 276

Query: 259 LTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDY 317
           +   R T       L++  V   D GEY C A N LGTA+    +TV+       +P+  
Sbjct: 277 MPADRITYQNHNKTLQLLSVGEQDDGEYHCLAENSLGTARHVYYVTVEAAPDWLHKPKSG 336

Query: 318 EVEAGQSATFRCNAVSDPSLKLSIVW-LRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
               G++A   C A   P  +  I W + G+   + + + ++ Q +  +L ++     D+
Sbjct: 337 LYGPGETARLDCQAQGRP--QPEITWRINGNRMEELDKDQKY-QIHRGALILSNVQPGDT 393

Query: 377 GQYTCRAQTELDFIEAQATL-TVQVP 401
               C A+     + A A +  VQ+P
Sbjct: 394 MVTQCEARNRHGHLLANAYIYVVQLP 419


>gi|348552758|ref|XP_003462194.1| PREDICTED: neural cell adhesion molecule L1-like isoform 1 [Cavia
           porcellus]
          Length = 1256

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 143/474 (30%), Positives = 215/474 (45%), Gaps = 25/474 (5%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W     P+ P+DRI+  N+ K+L +  V   D G Y 
Sbjct: 252 VALQGQPLVLECIAEGFPTPTIKWLLPSGPM-PADRITYQNHNKTLQLLSVGEQDDGEYH 310

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ +   ++V AAP +  +P+       ET   +C+A G P+PEI W  NG
Sbjct: 311 CLAENSLGTAR-HVYYVTVEAAPDWLHKPKSGLYGPGETARLDCQAQGRPQPEITWRING 369

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             + +   + + ++    + + N++  DT    C A N  G++  + Y+ V+    +I  
Sbjct: 370 NRMEELDKDQKYQIHRGALILSNVQPGDTMVTQCEARNRHGHLLANAYIYVVQLPAKILT 429

Query: 224 APKDEYT-VDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
                Y  V G+T  L C+ FGAP P V W+  +    L   R+     G L I D+   
Sbjct: 430 VDNQTYMGVAGRTAYLLCKAFGAPVPSVQWLDEEGTTVLRDERFFPYANGTLAIRDLQAN 489

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N    A    +L VKE T IT  P +   + G  ATF C A  DPSL+ S
Sbjct: 490 DTGRYFCQAANDQNNATIVANLQVKEATQITQGPREAIEKKGSRATFTCQASFDPSLRPS 549

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           + W      +    +S+  F+  +D  L +      D G Y+C A TELD +EA+A L V
Sbjct: 550 LTWRGDGRDLQELGDSDKYFI--DDGRLVIDNLEYGDQGNYSCVASTELDEVEARAQLLV 607

Query: 399 QVPLEAPSNFTLIQV-----IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
              + +P     ++V     +   +  +SW P   +        Y ++   ++       
Sbjct: 608 ---VGSPGPVPHVEVSERHLLKHSQVHLSWTPA--EDHNAAIEKYDIEFEDKEMAPEKWH 662

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG---PPSEIISFVTPEGVP 504
            L    G  T+T + K  P      RV A N    G   PPSE +  VTPE  P
Sbjct: 663 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPPSETV--VTPEAAP 713



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 134/312 (42%), Gaps = 35/312 (11%)

Query: 403  EAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG------EGSIRELI 456
            +A      ++ +++  ++VSW PV+   ++GH RGY V  W + DG      E    + +
Sbjct: 812  QASPELEKVKALNSTASLVSWKPVALAQVKGHLRGYNVTYWWQ-DGQRMHGKEHGYGKHV 870

Query: 457  VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLG 516
            V     T+  +    P S     V AFNG   GP S+  SF TPEGVPG  ++L      
Sbjct: 871  VVPANVTSVALSDLWPYSSYHVEVRAFNGRGAGPASKE-SFETPEGVPGHPEALHLECQS 929

Query: 517  SSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPST 576
            +++  L W  P   NGVL GY + Y  +       L   LP   DP   +  L  L P  
Sbjct: 930  ATSLQLHWKPPLSHNGVLTGYMLSYHPLDAGGEQQLSFPLP---DPEMRTHNLTNLSPDL 986

Query: 577  KYRIHLAGYTKAGDG------AESKYLFYVP-FKNPDNVEGRGSTPNNLVISWTAMPEIE 629
            +YR  L   T+ G G        +  L   P F N   + G     N  V+SW      +
Sbjct: 987  RYRFQLQATTRKGPGEAIVREGGTMNLSGKPDFGNISAMAGE----NYSVVSWVP----K 1038

Query: 630  HNAPHFKYRIFWRRHNTGEAWN--QDDVLDWRQSELVLANQPTFQPYEIKVV-------Q 680
                +F++RI ++    G+  +  Q + + + QS     N      YEI+++       Q
Sbjct: 1039 EGQCNFRFRILFKPLGEGKVSSDLQPEYVSYNQSSYTQWNLQPDTYYEIRLLREHTLLGQ 1098

Query: 681  TWTEKDGEGSIR 692
            T  + +G G +R
Sbjct: 1099 TNVKTNGTGRVR 1110



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 159/386 (41%), Gaps = 35/386 (9%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS-----QGNYGKSLIIKHVEFSD 98
           V      + L C   G P  Q  W KDGV   PS+ +        + G   I  +  F+ 
Sbjct: 46  VVFPTDDISLKCEARGKPEVQFRWMKDGVHFRPSEELGVTVHETPHSGSFTITGNNSFAQ 105

Query: 99  --QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKASGLP 153
             QG Y C  SN +G A S+ I L    AP +    V+P      E E+V   C      
Sbjct: 106 RFQGVYRCFASNQLGTAMSHEIQLMAEGAPKWPKEMVKPV--EVEERESVVLPCNPPPSA 163

Query: 154 EP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLGYVYK 208
           EP  I+W+++   I     + R  +G N  +   N+  SD+  +Y CNA    +   + K
Sbjct: 164 EPLRIYWMNSK--ILHIKQDERVSMGQNGNLYFANVLISDSHSDYICNAHFPGTRTIIQK 221

Query: 209 D-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIHNQKE 258
           + + + V A    I   P+  +          + G+ +VL C   G P P + W+     
Sbjct: 222 EPIDLRVKATNTMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLLPSGP 281

Query: 259 LTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDY 317
           +   R T       L++  V   D GEY C A N LGTA+    +TV+       +P+  
Sbjct: 282 MPADRITYQNHNKTLQLLSVGEQDDGEYHCLAENSLGTARHVYYVTVEAAPDWLHKPKSG 341

Query: 318 EVEAGQSATFRCNAVSDPSLKLSIVW-LRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
               G++A   C A   P  +  I W + G+   + + + ++ Q +  +L ++     D+
Sbjct: 342 LYGPGETARLDCQAQGRP--QPEITWRINGNRMEELDKDQKY-QIHRGALILSNVQPGDT 398

Query: 377 GQYTCRAQTELDFIEAQATL-TVQVP 401
               C A+     + A A +  VQ+P
Sbjct: 399 MVTQCEARNRHGHLLANAYIYVVQLP 424


>gi|348552760|ref|XP_003462195.1| PREDICTED: neural cell adhesion molecule L1-like isoform 2 [Cavia
           porcellus]
          Length = 1252

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 143/474 (30%), Positives = 215/474 (45%), Gaps = 25/474 (5%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W     P+ P+DRI+  N+ K+L +  V   D G Y 
Sbjct: 252 VALQGQPLVLECIAEGFPTPTIKWLLPSGPM-PADRITYQNHNKTLQLLSVGEQDDGEYH 310

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ +   ++V AAP +  +P+       ET   +C+A G P+PEI W  NG
Sbjct: 311 CLAENSLGTAR-HVYYVTVEAAPDWLHKPKSGLYGPGETARLDCQAQGRPQPEITWRING 369

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             + +   + + ++    + + N++  DT    C A N  G++  + Y+ V+    +I  
Sbjct: 370 NRMEELDKDQKYQIHRGALILSNVQPGDTMVTQCEARNRHGHLLANAYIYVVQLPAKILT 429

Query: 224 APKDEYT-VDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
                Y  V G+T  L C+ FGAP P V W+  +    L   R+     G L I D+   
Sbjct: 430 VDNQTYMGVAGRTAYLLCKAFGAPVPSVQWLDEEGTTVLRDERFFPYANGTLAIRDLQAN 489

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N    A    +L VKE T IT  P +   + G  ATF C A  DPSL+ S
Sbjct: 490 DTGRYFCQAANDQNNATIVANLQVKEATQITQGPREAIEKKGSRATFTCQASFDPSLRPS 549

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           + W      +    +S+  F+  +D  L +      D G Y+C A TELD +EA+A L V
Sbjct: 550 LTWRGDGRDLQELGDSDKYFI--DDGRLVIDNLEYGDQGNYSCVASTELDEVEARAQLLV 607

Query: 399 QVPLEAPSNFTLIQV-----IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
              + +P     ++V     +   +  +SW P   +        Y ++   ++       
Sbjct: 608 ---VGSPGPVPHVEVSERHLLKHSQVHLSWTPA--EDHNAAIEKYDIEFEDKEMAPEKWH 662

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG---PPSEIISFVTPEGVP 504
            L    G  T+T + K  P      RV A N    G   PPSE +  VTPE  P
Sbjct: 663 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPPSETV--VTPEAAP 713



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 134/312 (42%), Gaps = 35/312 (11%)

Query: 403  EAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG------EGSIRELI 456
            +A      ++ +++  ++VSW PV+   ++GH RGY V  W + DG      E    + +
Sbjct: 812  QASPELEKVKALNSTASLVSWKPVALAQVKGHLRGYNVTYWWQ-DGQRMHGKEHGYGKHV 870

Query: 457  VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLG 516
            V     T+  +    P S     V AFNG   GP S+  SF TPEGVPG  ++L      
Sbjct: 871  VVPANVTSVALSDLWPYSSYHVEVRAFNGRGAGPASKE-SFETPEGVPGHPEALHLECQS 929

Query: 517  SSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPST 576
            +++  L W  P   NGVL GY + Y  +       L   LP   DP   +  L  L P  
Sbjct: 930  ATSLQLHWKPPLSHNGVLTGYMLSYHPLDAGGEQQLSFPLP---DPEMRTHNLTNLSPDL 986

Query: 577  KYRIHLAGYTKAGDG------AESKYLFYVP-FKNPDNVEGRGSTPNNLVISWTAMPEIE 629
            +YR  L   T+ G G        +  L   P F N   + G     N  V+SW      +
Sbjct: 987  RYRFQLQATTRKGPGEAIVREGGTMNLSGKPDFGNISAMAGE----NYSVVSWVP----K 1038

Query: 630  HNAPHFKYRIFWRRHNTGEAWN--QDDVLDWRQSELVLANQPTFQPYEIKVV-------Q 680
                +F++RI ++    G+  +  Q + + + QS     N      YEI+++       Q
Sbjct: 1039 EGQCNFRFRILFKPLGEGKVSSDLQPEYVSYNQSSYTQWNLQPDTYYEIRLLREHTLLGQ 1098

Query: 681  TWTEKDGEGSIR 692
            T  + +G G +R
Sbjct: 1099 TNVKTNGTGRVR 1110



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 159/386 (41%), Gaps = 35/386 (9%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS-----QGNYGKSLIIKHVEFSD 98
           V      + L C   G P  Q  W KDGV   PS+ +        + G   I  +  F+ 
Sbjct: 46  VVFPTDDISLKCEARGKPEVQFRWMKDGVHFRPSEELGVTVHETPHSGSFTITGNNSFAQ 105

Query: 99  --QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKASGLP 153
             QG Y C  SN +G A S+ I L    AP +    V+P      E E+V   C      
Sbjct: 106 RFQGVYRCFASNQLGTAMSHEIQLMAEGAPKWPKEMVKPV--EVEERESVVLPCNPPPSA 163

Query: 154 EP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLGYVYK 208
           EP  I+W+++   I     + R  +G N  +   N+  SD+  +Y CNA    +   + K
Sbjct: 164 EPLRIYWMNSK--ILHIKQDERVSMGQNGNLYFANVLISDSHSDYICNAHFPGTRTIIQK 221

Query: 209 D-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIHNQKE 258
           + + + V A    I   P+  +          + G+ +VL C   G P P + W+     
Sbjct: 222 EPIDLRVKATNTMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLLPSGP 281

Query: 259 LTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDY 317
           +   R T       L++  V   D GEY C A N LGTA+    +TV+       +P+  
Sbjct: 282 MPADRITYQNHNKTLQLLSVGEQDDGEYHCLAENSLGTARHVYYVTVEAAPDWLHKPKSG 341

Query: 318 EVEAGQSATFRCNAVSDPSLKLSIVW-LRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
               G++A   C A   P  +  I W + G+   + + + ++ Q +  +L ++     D+
Sbjct: 342 LYGPGETARLDCQAQGRP--QPEITWRINGNRMEELDKDQKY-QIHRGALILSNVQPGDT 398

Query: 377 GQYTCRAQTELDFIEAQATL-TVQVP 401
               C A+     + A A +  VQ+P
Sbjct: 399 MVTQCEARNRHGHLLANAYIYVVQLP 424


>gi|194221130|ref|XP_001497302.2| PREDICTED: neural cell adhesion molecule L1-like protein isoform 1
           [Equus caballus]
          Length = 1209

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 181/713 (25%), Positives = 305/713 (42%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G Y C 
Sbjct: 253 LKGETLLLECFAEGLPTPQVDWNKLGGDL-PKGRETKENYGKTLKIENVSYRDKGIYRCT 311

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            +N +G A ++   ++V   P +T +P+    +   +    C+A G PEP I W  NG P
Sbjct: 312 ANNFLGSA-THDFHITVEEPPRWTKKPQSGVYSTGSSGILLCEAEGEPEPTIKWRVNGSP 370

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEA 224
           I + P      V    I+  NL+ + T  Y C A+N+ G +  +  ++V+   P I TE 
Sbjct: 371 IEKNP-FAGDVVSSREISFTNLQPNHTAVYQCEASNAHGTILANANIDVVDVRPLIQTED 429

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            ++  TV G +  L C  F +P+  V+W  +   K L G RY I E G L+I      D+
Sbjct: 430 EENYATVVGYSAFLYCEFFSSPEAIVSWQKVEEAKPLEGRRYHIYENGTLQINRTTEEDA 489

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N  G    + +L ++  T +   P++  V    +   RC +  D  LK  L 
Sbjct: 490 GSYSCWVENAKGKTAVTANLDIRNATKLRISPKNPRVPRSHTLELRCESTCDSYLKHSLK 549

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y+C AQT LD +     +T+ 
Sbjct: 550 LSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDKGIYSCSAQTALDSVADITQVTIL 609

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +      +   Y V+    K+  G   EL   +
Sbjct: 610 DVPDPPENLHLSERQN-RSVRLTWE--AGDDHNSNISEYIVEFEGNKEEPGRWEELTRVQ 666

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 667 GKETTVLL-SLAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQP 725

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 726 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPT 776

Query: 576 T--KYRIHLAGYTKAGDGAESK-YLFYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +      G G E +  + Y     PD    + G     + LV ++W+++P+ 
Sbjct: 777 VYAPYDVQVQAVNHLGSGPEPQSVVLYSGEDYPDTAPVIHGVDVINSTLVKVTWSSIPKD 836

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ +++        
Sbjct: 837 RVHGHLKGYQINW--------WKTKSLLDGRT-----------HPKEVNILRF------- 870

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+ +   V      S+    VLA+N    GP SE  +F TPEG
Sbjct: 871 ---------SGQRSYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYTFQTPEG 914



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 134/575 (23%), Positives = 233/575 (40%), Gaps = 51/575 (8%)

Query: 53   LFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L+C F  +P     W K  +  P+    R        +L I      D GSY+C V N  
Sbjct: 443  LYCEFFSSPEAIVSWQKVEEAKPL--EGRRYHIYENGTLQINRTTEEDAGSYSCWVENAK 500

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA---SGLPEP-EIHWVHNGKPI 166
            G+  + + +L +  A    + P+        T+   C++   S L    ++ W  +G+  
Sbjct: 501  GKT-AVTANLDIRNATKLRISPKNPRVPRSHTLELRCESTCDSYLKHSLKLSWSKDGEAF 559

Query: 167  S-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
                  + R  +    +TI N+   D G Y C+A  +L  V     V +L    ++ + P
Sbjct: 560  EINGTEDGRIIIDGANLTISNVTLEDKGIYSCSAQTALDSVADITQVTIL----DVPDPP 615

Query: 226  KDEYTVD--GKTVVLTCRVFGAPKPE-----VNWIHNQKELTGGRYTILETGDLKITDVA 278
            ++ +  +   ++V LT               V +  N++E   GR+  L     K T V 
Sbjct: 616  ENLHLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEE--PGRWEELTRVQGKETTVL 673

Query: 279  FADSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSAT------ 326
             + +     ++   A N++G +Q S      E         P++  V+A Q         
Sbjct: 674  LSLAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWE 733

Query: 327  -FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
              +    + P L+  + W     P+++E E       +++L V   +         +A  
Sbjct: 734  PLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TVTNHTLRVMTPTVYAPYDVQVQAVN 789

Query: 386  ELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKAVVSWNPVSPQSLRGHFRGYKVQT 442
             L       ++ +    + P    +I    VI++    V+W+ +    + GH +GY++  
Sbjct: 790  HLGSGPEPQSVVLYSGEDYPDTAPVIHGVDVINSTLVKVTWSSIPKDRVHGHLKGYQINW 849

Query: 443  WTEK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
            W  K   DG    +E+ + +  G+ +   V      S+    VLA+N    GP SE  +F
Sbjct: 850  WKTKSLLDGRTHPKEVNILRFSGQRSYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYTF 909

Query: 498  VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERL 556
             TPEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T +VG L +  
Sbjct: 910  QTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGNLTGYLLQYQIINDTYEVGELNDI- 968

Query: 557  PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
              I+ P+  S  L  L  +TKY+ +L   T  G G
Sbjct: 969  -NITTPSQPSWHLRNLNAATKYKFYLRACTSKGCG 1002



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 164/418 (39%), Gaps = 54/418 (12%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P   W+KD  P N SD   I   N G   I      S  QG Y C  SN
Sbjct: 54  QIECEAKGNPEPTFTWTKDDKPFNLSDPQIIVSNNSGTFKIPNEGHISHFQGKYRCFASN 113

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKP 165
            +G A S  I+  V   P F  E  E +   E + +   C    GLP   I+W++   + 
Sbjct: 114 KLGVAVSEEIEFIVPNVPKFPKEKIEPLEVEEGDAIVLPCNPPKGLPPLHIYWMNIELEH 173

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGN-YGC--------------------NATNSLG 204
           I Q       + G   +   N+ + D+ N Y C                    N++NS+ 
Sbjct: 174 IEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNSI- 230

Query: 205 YVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRY 264
              K     +L   PE +        + G+T++L C   G P P+V+W     +L  GR 
Sbjct: 231 ---KQRKPRLLLPPPE-SGGESSLTILKGETLLLECFAEGLPTPQVDWNKLGGDLPKGRE 286

Query: 265 TILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQ 323
           T    G  LKI +V++ D G Y C A N LG+A     +TV+E    T +P+      G 
Sbjct: 287 TKENYGKTLKIENVSYRDKGIYRCTANNFLGSATHDFHITVEEPPRWTKKPQSGVYSTGS 346

Query: 324 SATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP---RFVQSNDYSL-------TVTKSSE 373
           S    C A  +P  + +I W     PI  E  P     V S + S        T     E
Sbjct: 347 SGILLCEAEGEP--EPTIKWRVNGSPI--EKNPFAGDVVSSREISFTNLQPNHTAVYQCE 402

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDAKKAVVSWNPV 426
             +   T  A   +D ++ +  +  +       +   S F   +   + +A+VSW  V
Sbjct: 403 ASNAHGTILANANIDVVDVRPLIQTEDEENYATVVGYSAFLYCEFFSSPEAIVSWQKV 460



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 113/293 (38%), Gaps = 31/293 (10%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPN--PRRKVGPNRITIENLRKSDTGNYGC 197
           +E    EC+A G PEP   W  + KP + + P        G  +I  E       G Y C
Sbjct: 50  DEYFQIECEAKGNPEPTFTWTKDDKPFNLSDPQIIVSNNSGTFKIPNEGHISHFQGKYRC 109

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN 255
            A+N LG    +    ++ + P+  +   +   V +G  +VL C    G P   + W++ 
Sbjct: 110 FASNKLGVAVSEEIEFIVPNVPKFPKEKIEPLEVEEGDAIVLPCNPPKGLPPLHIYWMNI 169

Query: 256 QKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTH 309
           + E      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV     
Sbjct: 170 ELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNS 229

Query: 310 ITDQ--------PE-----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           I  +        PE        +  G++    C A   P+ ++    L G  P   E++ 
Sbjct: 230 IKQRKPRLLLPPPESGGESSLTILKGETLLLECFAEGLPTPQVDWNKLGGDLPKGRETKE 289

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFT 409
            + +    +L +   S  D G Y C A   L      AT    + +E P  +T
Sbjct: 290 NYGK----TLKIENVSYRDKGIYRCTANNFL----GSATHDFHITVEEPPRWT 334


>gi|338714497|ref|XP_003363093.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 3
           [Equus caballus]
          Length = 1171

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 181/713 (25%), Positives = 305/713 (42%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G Y C 
Sbjct: 269 LKGETLLLECFAEGLPTPQVDWNKLGGDL-PKGRETKENYGKTLKIENVSYRDKGIYRCT 327

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            +N +G A ++   ++V   P +T +P+    +   +    C+A G PEP I W  NG P
Sbjct: 328 ANNFLGSA-THDFHITVEEPPRWTKKPQSGVYSTGSSGILLCEAEGEPEPTIKWRVNGSP 386

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEA 224
           I + P      V    I+  NL+ + T  Y C A+N+ G +  +  ++V+   P I TE 
Sbjct: 387 IEKNP-FAGDVVSSREISFTNLQPNHTAVYQCEASNAHGTILANANIDVVDVRPLIQTED 445

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            ++  TV G +  L C  F +P+  V+W  +   K L G RY I E G L+I      D+
Sbjct: 446 EENYATVVGYSAFLYCEFFSSPEAIVSWQKVEEAKPLEGRRYHIYENGTLQINRTTEEDA 505

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N  G    + +L ++  T +   P++  V    +   RC +  D  LK  L 
Sbjct: 506 GSYSCWVENAKGKTAVTANLDIRNATKLRISPKNPRVPRSHTLELRCESTCDSYLKHSLK 565

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y+C AQT LD +     +T+ 
Sbjct: 566 LSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDKGIYSCSAQTALDSVADITQVTIL 625

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +      +   Y V+    K+  G   EL   +
Sbjct: 626 DVPDPPENLHLSERQN-RSVRLTWE--AGDDHNSNISEYIVEFEGNKEEPGRWEELTRVQ 682

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 683 GKETTVLL-SLAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQP 741

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 742 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPT 792

Query: 576 T--KYRIHLAGYTKAGDGAESK-YLFYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +      G G E +  + Y     PD    + G     + LV ++W+++P+ 
Sbjct: 793 VYAPYDVQVQAVNHLGSGPEPQSVVLYSGEDYPDTAPVIHGVDVINSTLVKVTWSSIPKD 852

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ +++        
Sbjct: 853 RVHGHLKGYQINW--------WKTKSLLDGRT-----------HPKEVNILRF------- 886

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+ +   V      S+    VLA+N    GP SE  +F TPEG
Sbjct: 887 ---------SGQRSYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYTFQTPEG 930



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 134/575 (23%), Positives = 233/575 (40%), Gaps = 51/575 (8%)

Query: 53   LFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L+C F  +P     W K  +  P+    R        +L I      D GSY+C V N  
Sbjct: 459  LYCEFFSSPEAIVSWQKVEEAKPL--EGRRYHIYENGTLQINRTTEEDAGSYSCWVENAK 516

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA---SGLPEP-EIHWVHNGKPI 166
            G+  + + +L +  A    + P+        T+   C++   S L    ++ W  +G+  
Sbjct: 517  GKT-AVTANLDIRNATKLRISPKNPRVPRSHTLELRCESTCDSYLKHSLKLSWSKDGEAF 575

Query: 167  S-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
                  + R  +    +TI N+   D G Y C+A  +L  V     V +L    ++ + P
Sbjct: 576  EINGTEDGRIIIDGANLTISNVTLEDKGIYSCSAQTALDSVADITQVTIL----DVPDPP 631

Query: 226  KDEYTVD--GKTVVLTCRVFGAPKPE-----VNWIHNQKELTGGRYTILETGDLKITDVA 278
            ++ +  +   ++V LT               V +  N++E   GR+  L     K T V 
Sbjct: 632  ENLHLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEE--PGRWEELTRVQGKETTVL 689

Query: 279  FADSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSAT------ 326
             + +     ++   A N++G +Q S      E         P++  V+A Q         
Sbjct: 690  LSLAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWE 749

Query: 327  -FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
              +    + P L+  + W     P+++E E       +++L V   +         +A  
Sbjct: 750  PLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TVTNHTLRVMTPTVYAPYDVQVQAVN 805

Query: 386  ELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKAVVSWNPVSPQSLRGHFRGYKVQT 442
             L       ++ +    + P    +I    VI++    V+W+ +    + GH +GY++  
Sbjct: 806  HLGSGPEPQSVVLYSGEDYPDTAPVIHGVDVINSTLVKVTWSSIPKDRVHGHLKGYQINW 865

Query: 443  WTEK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
            W  K   DG    +E+ + +  G+ +   V      S+    VLA+N    GP SE  +F
Sbjct: 866  WKTKSLLDGRTHPKEVNILRFSGQRSYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYTF 925

Query: 498  VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERL 556
             TPEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T +VG L +  
Sbjct: 926  QTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGNLTGYLLQYQIINDTYEVGELNDI- 984

Query: 557  PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
              I+ P+  S  L  L  +TKY+ +L   T  G G
Sbjct: 985  -NITTPSQPSWHLRNLNAATKYKFYLRACTSKGCG 1018



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 164/429 (38%), Gaps = 60/429 (13%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P   W+KD  P N SD   I   N G   I      S  QG Y C  SN
Sbjct: 54  QIECEAKGNPEPTFTWTKDDKPFNLSDPQIIVSNNSGTFKIPNEGHISHFQGKYRCFASN 113

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKP 165
            +G A S  I+  V   P F  E  E +   E + +   C    GLP   I+W++   + 
Sbjct: 114 KLGVAVSEEIEFIVPNVPKFPKEKIEPLEVEEGDAIVLPCNPPKGLPPLHIYWMNIELEH 173

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA- 218
           I Q       + G   +   N+ + D+ N Y C A        +  +   + VN L H  
Sbjct: 174 IEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHVN 231

Query: 219 -------------------PEITEAPKDE------YTVDGKTVVLTCRVFGAPKPEVNWI 253
                              P +   P +         + G+T++L C   G P P+V+W 
Sbjct: 232 DSSSSTEIGSKANSIKQRKPRLLLPPPESGGESSLTILKGETLLLECFAEGLPTPQVDWN 291

Query: 254 HNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD 312
               +L  GR T    G  LKI +V++ D G Y C A N LG+A     +TV+E    T 
Sbjct: 292 KLGGDLPKGRETKENYGKTLKIENVSYRDKGIYRCTANNFLGSATHDFHITVEEPPRWTK 351

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP---RFVQSNDYSL--- 366
           +P+      G S    C A  +P  + +I W     PI  E  P     V S + S    
Sbjct: 352 KPQSGVYSTGSSGILLCEAEGEP--EPTIKWRVNGSPI--EKNPFAGDVVSSREISFTNL 407

Query: 367 ----TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDAK 417
               T     E  +   T  A   +D ++ +  +  +       +   S F   +   + 
Sbjct: 408 QPNHTAVYQCEASNAHGTILANANIDVVDVRPLIQTEDEENYATVVGYSAFLYCEFFSSP 467

Query: 418 KAVVSWNPV 426
           +A+VSW  V
Sbjct: 468 EAIVSWQKV 476



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 114/309 (36%), Gaps = 47/309 (15%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPN--PRRKVGPNRITIENLRKSDTGNYGC 197
           +E    EC+A G PEP   W  + KP + + P        G  +I  E       G Y C
Sbjct: 50  DEYFQIECEAKGNPEPTFTWTKDDKPFNLSDPQIIVSNNSGTFKIPNEGHISHFQGKYRC 109

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN 255
            A+N LG    +    ++ + P+  +   +   V +G  +VL C    G P   + W++ 
Sbjct: 110 FASNKLGVAVSEEIEFIVPNVPKFPKEKIEPLEVEEGDAIVLPCNPPKGLPPLHIYWMNI 169

Query: 256 QKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTH 309
           + E      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV    H
Sbjct: 170 ELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKH 229

Query: 310 ITDQPEDYEVEA-----------------------------GQSATFRCNAVSDPSLKLS 340
           + D     E+ +                             G++    C A   P+ ++ 
Sbjct: 230 VNDSSSSTEIGSKANSIKQRKPRLLLPPPESGGESSLTILKGETLLLECFAEGLPTPQVD 289

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
              L G  P   E++  + +    +L +   S  D G Y C A   L      AT    +
Sbjct: 290 WNKLGGDLPKGRETKENYGK----TLKIENVSYRDKGIYRCTANNFL----GSATHDFHI 341

Query: 401 PLEAPSNFT 409
            +E P  +T
Sbjct: 342 TVEEPPRWT 350


>gi|81170810|gb|ABB58725.1| L1 cell adhesion molecule [Pan troglodytes]
          Length = 534

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 173/360 (48%), Gaps = 9/360 (2%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L +  V   D G Y 
Sbjct: 85  VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLKVGEEDDGEYR 143

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 144 CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 202

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 203 IPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 262

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 263 ADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 322

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 323 DTGRYFCLAANDQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPS 382

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 383 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 440


>gi|354488859|ref|XP_003506583.1| PREDICTED: neural cell adhesion molecule L1-like [Cricetulus
           griseus]
          Length = 1259

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 138/472 (29%), Positives = 214/472 (45%), Gaps = 21/472 (4%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W     P+ P+ R+   N+ K+L + +V   D G YT
Sbjct: 252 VALQGQPLILECIAEGFPTPTIKWLHPSDPM-PAHRVIYQNHNKTLQLLNVGEEDDGEYT 310

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 311 CLAENSLGSAR-HAYYVTVEAAPYWLQKPQSHLYGPGETARLDCQVQGRPQPEVTWSING 369

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             + +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+     I  
Sbjct: 370 MSMEKVNKDQKYRIEQGSLILSNVQPSDTMVTQCEARNQHGLLLANAYIYVVQLPARILT 429

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
                Y  V+G T  L C+ FGAP P V W+  +    L   R+     G L I D+   
Sbjct: 430 KDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGTLGIRDLQAN 489

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VKE T IT+ P     + G   TF C A  DPSL+ S
Sbjct: 490 DTGRYFCQAANDQNNVTILANLQVKEATQITEGPRSAIEKKGARVTFTCQASFDPSLQAS 549

Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           I W      +    +S+  F++  D  L +      D G Y+C A TELD +E++A L V
Sbjct: 550 ITWRGDGRDLQERGDSDKYFIE--DGQLVIQSLDYSDQGNYSCVASTELDEVESRAQLLV 607

Query: 399 QVPLEAPSNFTLIQVID-----AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
              + +P   + +++ D       +  +SW+P   +        Y ++   ++       
Sbjct: 608 ---VGSPGPVSHLELSDRYLLKQSQVHLSWSPA--EDHNSPIEKYDIEFEDKEMAPEKWY 662

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVP 504
            L    G  T+T + K  P      RV A N    G PS +  + VTPE  P
Sbjct: 663 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 713



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 163/583 (27%), Positives = 248/583 (42%), Gaps = 89/583 (15%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR---ITIENLRKSDTG 193
           A + + +  EC A G P P I W+H   P+        R +  N    + + N+ + D G
Sbjct: 253 ALQGQPLILECIAEGFPTPTIKWLHPSDPMPA-----HRVIYQNHNKTLQLLNVGEEDDG 307

Query: 194 NYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWI 253
            Y C A NSLG      YV V A AP   + P+      G+T  L C+V G P+PEV W 
Sbjct: 308 EYTCLAENSLGSARHAYYVTVEA-APYWLQKPQSHLYGPGETARLDCQVQGRPQPEVTWS 366

Query: 254 HN----QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH 309
            N    +K     +Y I E G L +++V  +D+    C ARN+ G    +  + V +   
Sbjct: 367 INGMSMEKVNKDQKYRI-EQGSLILSNVQPSDTMVTQCEARNQHGLLLANAYIYVVQLPA 425

Query: 310 --ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
             +T   + Y    G +A   C A   P    S+ WL        + E RF    + +L 
Sbjct: 426 RILTKDNQTYMAVEGSTAYLLCKAFGAPVP--SVQWLDEEGTTVLQDE-RFFPYANGTLG 482

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPL---EAPSNFTLIQVIDAKKAVV--- 421
           +      D+G+Y C+A  + + +   A L V+      E P +      I+ K A V   
Sbjct: 483 IRDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITEGPRS-----AIEKKGARVTFT 537

Query: 422 ---SWNPVSPQSL--RGHFRGYKVQTWTEK----DGEGSIRELIV----NKGESTTTEVD 468
              S++P    S+  RG  R  + +  ++K    DG+  I+ L      N     +TE+D
Sbjct: 538 CQASFDPSLQASITWRGDGRDLQERGDSDKYFIEDGQLVIQSLDYSDQGNYSCVASTELD 597

Query: 469 KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA---IPLGSSAFYLKWV 525
           +     ++ A++L                    G PG V  LE      L  S  +L W 
Sbjct: 598 EV----ESRAQLLVV------------------GSPGPVSHLELSDRYLLKQSQVHLSWS 635

Query: 526 KPEQPNGVLMGYKIKYQSVKGTKVGP----LLERLPYISDPTTTSAKLAGLEPSTKYRIH 581
             E  N  +  Y I+++     ++ P     L ++P   + T+T+ KL+   P   Y   
Sbjct: 636 PAEDHNSPIEKYDIEFED---KEMAPEKWYSLGKVP--GNQTSTTLKLS---PYVHYTFR 687

Query: 582 LAGYTKAGDGAESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHF 635
           +    K G G  S     V      P KNP +V G G+  NN+VI+W  +  ++ NAP  
Sbjct: 688 VTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLWWMDWNAPQV 747

Query: 636 KYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           +YR+ WR     E W +  V D     LV++N  TF PYEIKV
Sbjct: 748 QYRVQWRPQGKQETWKEQTVSD---PFLVVSNTSTFVPYEIKV 787



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 84/186 (45%), Gaps = 9/186 (4%)

Query: 411  IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW----TEKDGEGSI-RELIVNKGESTTT 465
            I + ++   +V W PV    ++GH RGY V  W      K  +  + +  +V    +T+ 
Sbjct: 820  ITIFNSSTVLVRWRPVDLAQVKGHLRGYNVTFWWKGSQRKHSKRHVHKSHMVVPANTTSA 879

Query: 466  EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWV 525
             +    P S     V AFNG   GP SE  +F TPEGVPG  ++L       ++  L W 
Sbjct: 880  ILSGLRPYSSYHVEVGAFNGRGLGPASEW-TFSTPEGVPGHPEALHLECQSDTSLLLHWQ 938

Query: 526  KPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
             P   NGVL GY + Y  + G     L   L   SDP   +  L  L P+ +YR  L   
Sbjct: 939  PPLSHNGVLTGYLLSYHPLDGESKEQLFLNL---SDPELRTHNLTNLNPNLQYRFQLQAT 995

Query: 586  TKAGDG 591
            T+ G G
Sbjct: 996  TQQGPG 1001



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 91/387 (23%), Positives = 163/387 (42%), Gaps = 31/387 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLIIK-HVE 95
           ++ V      + L C   G P  +  W+KDG+   P +     + +  Y  S  I+ +  
Sbjct: 43  QRLVVFPTDDISLKCEARGRPQVEFRWTKDGIHFKPKEELGVVVHEAPYSGSFTIEGNNS 102

Query: 96  FSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKAS 150
           F+   QG Y C  SN +G A S+ I L    AP +   TV+P  +   E   +      S
Sbjct: 103 FAQRFQGIYRCYASNKLGTAMSHEIQLVAEGAPKWPKETVKPVEVEEGESVVLPCNPPPS 162

Query: 151 GLPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLGYV 206
             P   I+W+++   I     + R  +G N  +   N+  SD   +Y CNA    +   +
Sbjct: 163 AAPL-RIYWMNSK--ILHIKQDERVSMGQNGDLYFANVLTSDNHSDYICNAHFPGTRTII 219

Query: 207 YK---DVYV----NVLAHAPEI---TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
            K   D+ V    +++   P +   T +      + G+ ++L C   G P P + W+H  
Sbjct: 220 QKEPIDLRVKPTNSMIDRKPRLLFPTNSSSRLVALQGQPLILECIAEGFPTPTIKWLHPS 279

Query: 257 KELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE 315
             +   R         L++ +V   D GEYTC A N LG+A+ +  +TV+   +   +P+
Sbjct: 280 DPMPAHRVIYQNHNKTLQLLNVGEEDDGEYTCLAENSLGSARHAYYVTVEAAPYWLQKPQ 339

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
            +    G++A   C     P  +  + W      ++  ++ +  +    SL ++     D
Sbjct: 340 SHLYGPGETARLDCQVQGRP--QPEVTWSINGMSMEKVNKDQKYRIEQGSLILSNVQPSD 397

Query: 376 SGQYTCRAQTELDFIEAQATL-TVQVP 401
           +    C A+ +   + A A +  VQ+P
Sbjct: 398 TMVTQCEARNQHGLLLANAYIYVVQLP 424



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 72/314 (22%), Positives = 124/314 (39%), Gaps = 49/314 (15%)

Query: 122 VLAAPYFTVE-PEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG-- 178
           V+  P  T + P+ +     + ++ +C+A G P+ E  W  +G         P+ ++G  
Sbjct: 31  VMEPPVITEQSPQRLVVFPTDDISLKCEARGRPQVEFRWTKDGIHF-----KPKEELGVV 85

Query: 179 ------PNRITIE---NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEAPKDE 228
                     TIE   +  +   G Y C A+N LG         V   AP+   E  K  
Sbjct: 86  VHEAPYSGSFTIEGNNSFAQRFQGIYRCYASNKLGTAMSHEIQLVAEGAPKWPKETVKPV 145

Query: 229 YTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL---TGGRYTILETGDLKITDVAFADS-GE 284
              +G++VVL C    +  P   +  N K L      R ++ + GDL   +V  +D+  +
Sbjct: 146 EVEEGESVVLPCNPPPSAAPLRIYWMNSKILHIKQDERVSMGQNGDLYFANVLTSDNHSD 205

Query: 285 YTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE------------------AGQSAT 326
           Y C A        G+ ++  KE   +  +P +  ++                   GQ   
Sbjct: 206 YICNAH-----FPGTRTIIQKEPIDLRVKPTNSMIDRKPRLLFPTNSSSRLVALQGQPLI 260

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
             C A   P+   +I WL  S+P+   +     Q+++ +L +    E D G+YTC A+  
Sbjct: 261 LECIAEGFPT--PTIKWLHPSDPM--PAHRVIYQNHNKTLQLLNVGEEDDGEYTCLAENS 316

Query: 387 LDFIEAQATLTVQV 400
           L        +TV+ 
Sbjct: 317 LGSARHAYYVTVEA 330


>gi|47228829|emb|CAG07561.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1197

 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 192/725 (26%), Positives = 291/725 (40%), Gaps = 90/725 (12%)

Query: 52  ELFCIFGGTPLPQTI----WSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           +L  I    P+  T+    W K G  + P  R    N+G+ LI+  VE SD G Y C+  
Sbjct: 181 KLRTIVQKMPMAVTVRSLKWMKMGEKLPP--RTEFDNFGRLLILSEVEESDGGQYMCKAK 238

Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           N  GEA  Y  ++ V  AP  + T  P+         V  +C  SG P  +I W  NG+ 
Sbjct: 239 NSAGEAVHY-FNVMVEGAPPEWLTGPPQDQLLVIGSDVHIKCSVSGKPSSDIIWRKNGEL 297

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA------- 218
               P N RR V  + + + N    DT  Y C+A+N  G +  ++ + V++ +       
Sbjct: 298 FIDDPENNRR-VLDDTVVLHNAGPEDTAVYQCDASNGHGGLLANINIMVMSESQGSLLDM 356

Query: 219 -PEITEAPKDEY-TVDGKTVVLTCRVFGAPKPEVNWIH--NQKELTGGRYTILETGDLKI 274
            P I  +   EY  V G  V++ C  F +P P ++W    NQ+ + G R+  L+ G L+I
Sbjct: 357 TPRILTSDSQEYPVVQGVDVIMNCSAFSSPLPTISWFRGANQEAVKGERFFTLQNGSLQI 416

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
                 DSG+Y C A N  G A  +  L VK+ T I   P D EV +G +A   C A  D
Sbjct: 417 IGAEKNDSGKYVCVALNTEGKAAVTAVLDVKDPTRIVSGPRDAEVMSGATAQLICQAEYD 476

Query: 335 PSLKLS--IVWLRGSE--PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
            SL+ S  +VW +  +  P+  E   R+  + D  L +   +  DSG Y C A+T LD +
Sbjct: 477 KSLQDSFVLVWRKDGDDIPLSVEENSRYAVA-DSMLRIMNVALNDSGTYMCIARTSLDEM 535

Query: 391 EAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQ--SLRGHFRGYKVQTWTEKDG 448
            A A LTV    +AP    + ++   +   +SW P S    S+      ++   W     
Sbjct: 536 NATALLTVLDVPDAPLKVEISEIRSPRNISLSWVPGSDHNSSVTEFVVEFQESQWE---- 591

Query: 449 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF-----VTPEGV 503
            G  ++L    G   T ++      S  F RV A N    GPP +           P+  
Sbjct: 592 SGVWKKLQKVPGNQATADLVLHGDLSYKF-RVYAINAVGPGPPGDPTETHKTPPAAPDRN 650

Query: 504 PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISD 561
           P  ++    +P      +      EQ NG    YK+ Y+   V+      ++++  ++  
Sbjct: 651 PQDIKIQGHLPHQMDISWESLPVTEQ-NGPGFEYKVSYRRLGVEDQWREHMVKQSSFVVR 709

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPN 616
            T+T            Y + +      G G E K +       VP   P +V        
Sbjct: 710 NTST---------FVPYEVKIQSRNDIGWGPEPKVVTGYSGEDVPAAAPRDVAVEVFNTT 760

Query: 617 NLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEI 676
            L +SWT +P          Y++ W R  +    N +  LD RQS               
Sbjct: 761 VLRVSWTPVPPATVRGHLGGYKLHWSRLRS--LLNPNRTLDQRQS--------------- 803

Query: 677 KVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 736
                             +   G      V    P S+    V  +N   NGP S+ ++F
Sbjct: 804 ------------------LSFPGRRAQAMVPGLEPFSEYRLTVSVYNKKGNGPNSDPVTF 845

Query: 737 VTPEG 741
            TPEG
Sbjct: 846 STPEG 850



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 172/719 (23%), Positives = 280/719 (38%), Gaps = 106/719 (14%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDG---VPINPSDRISQGNYGKSLIIKHVEFSD-QGSYT 103
           +K V++ C   G P PQ  W+KDG   VP   +   +Q   G S ++ + +F   QG+Y 
Sbjct: 21  DKTVKIECDARGNPPPQYRWTKDGEDFVPPRATTTKTQHTDG-SFVLHNKQFIQFQGTYR 79

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYF--TVEPEFINAAEEETVTFECK-ASGLPEPEIHWV 160
           C   N +G A +  I L V   P F    EP  I   E + +T  C    G    +++W+
Sbjct: 80  CYAFNKLGTAMTKEITLIVPTVPKFPKVGEPP-IAVDEGDPITLHCHPPEGAVPRQLYWM 138

Query: 161 HNGKPISQ-------------------------------APPNPRRKVG--PNRITIENL 187
                + Q                               A P  R  V   P  +T+ +L
Sbjct: 139 SLDLQLIQQDERVSMGTDGNLYFSHALQNDSRLDYYCNAAFPKLRTIVQKMPMAVTVRSL 198

Query: 188 R----------KSDTGNYG-----------------CNATNSLGYVYKDVYVNVLAHAPE 220
           +          +++  N+G                 C A NS G       V V    PE
Sbjct: 199 KWMKMGEKLPPRTEFDNFGRLLILSEVEESDGGQYMCKAKNSAGEAVHYFNVMVEGAPPE 258

Query: 221 -ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT----GGRYTILETGDLKIT 275
            +T  P+D+  V G  V + C V G P  ++ W  N +         R  + +T  + + 
Sbjct: 259 WLTGPPQDQLLVIGSDVHIKCSVSGKPSSDIIWRKNGELFIDDPENNRRVLDDT--VVLH 316

Query: 276 DVAFADSGEYTCFARNKLG----------TAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
           +    D+  Y C A N  G           ++  GSL       +T   ++Y V  G   
Sbjct: 317 NAGPEDTAVYQCDASNGHGGLLANINIMVMSESQGSLLDMTPRILTSDSQEYPVVQGVDV 376

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
              C+A S P   +S  W RG+     + E RF    + SL +  + + DSG+Y C A  
Sbjct: 377 IMNCSAFSSPLPTIS--WFRGANQEAVKGE-RFFTLQNGSLQIIGAEKNDSGKYVCVALN 433

Query: 386 ELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE 445
                   A L V+ P    S     +V+    A +       +SL+  F    V  W  
Sbjct: 434 TEGKAAVTAVLDVKDPTRIVSGPRDAEVMSGATAQLICQAEYDKSLQDSF----VLVW-R 488

Query: 446 KDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPG 505
           KDG+     +  N   +    + + +  + N +         +       + +T   VP 
Sbjct: 489 KDGDDIPLSVEENSRYAVADSMLRIMNVALNDSGTYMCIARTSLDEMNATALLTVLDVPD 548

Query: 506 TVQSLEAIPLGS-SAFYLKWVKPEQPNGVLMGYKIKYQSVK-GTKVGPLLERLPYISDPT 563
               +E   + S     L WV     N  +  + +++Q  +  + V   L+++P   +  
Sbjct: 549 APLKVEISEIRSPRNISLSWVPGSDHNSSVTEFVVEFQESQWESGVWKKLQKVP--GNQA 606

Query: 564 TTSAKLAGLEPSTKYR---IHLAGYTKAGDGAES-KYLFYVPFKNPDNVEGRGSTPNNLV 619
           T    L G + S K+R   I+  G    GD  E+ K     P +NP +++ +G  P+ + 
Sbjct: 607 TADLVLHG-DLSYKFRVYAINAVGPGPPGDPTETHKTPPAAPDRNPQDIKIQGHLPHQMD 665

Query: 620 ISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           ISW ++P  E N P F+Y++ +RR    + W +  V   +QS  V+ N  TF PYE+K+
Sbjct: 666 ISWESLPVTEQNGPGFEYKVSYRRLGVEDQWREHMV---KQSSFVVRNTSTFVPYEVKI 721



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 93/212 (43%), Gaps = 21/212 (9%)

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV-----QTWTEKDGEGSIRE 454
           VP  AP +   ++V +     VSW PV P ++RGH  GYK+     ++    +     R+
Sbjct: 744 VPAAAPRDVA-VEVFNTTVLRVSWTPVPPATVRGHLGGYKLHWSRLRSLLNPNRTLDQRQ 802

Query: 455 LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG------------ 502
            +   G      V    P S+    V  +N   NGP S+ ++F TPEG            
Sbjct: 803 SLSFPGRRAQAMVPGLEPFSEYRLTVSVYNKKGNGPNSDPVTFSTPEGDDDGDIFIVVIV 862

Query: 503 ---VPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
              VP  V  L A      + +L+W  P   NG+L+GY ++Y  +  T +     R   I
Sbjct: 863 IVTVPAQVPILTAYNTQKKSVFLEWSPPLPTNGILIGYLLQYHLINTTTMEVADSREVNI 922

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           S    T  ++ GLE  + YR  L+G T+ G G
Sbjct: 923 SVADATQWQIRGLEEGSLYRFLLSGCTRVGCG 954



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 133/606 (21%), Positives = 227/606 (37%), Gaps = 82/606 (13%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQG 100
           + ++ +    V + C   G P    IW K+G         ++     ++++ +    D  
Sbjct: 265 QDQLLVIGSDVHIKCSVSGKPSSDIIWRKNGELFIDDPENNRRVLDDTVVLHNAGPEDTA 324

Query: 101 SYTCEVSNGVGEAKSYSIDLSVLA---APYFTVEPEFINAAEEE-------TVTFECKAS 150
            Y C+ SNG G   + +I++ V++        + P  + +  +E        V   C A 
Sbjct: 325 VYQCDASNGHGGLLA-NINIMVMSESQGSLLDMTPRILTSDSQEYPVVQGVDVIMNCSAF 383

Query: 151 GLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIEN-------LRKSDTGNYGCNATNSL 203
             P P I W            N     G    T++N         K+D+G Y C A N+ 
Sbjct: 384 SSPLPTISWFRGA--------NQEAVKGERFFTLQNGSLQIIGAEKNDSGKYVCVALNTE 435

Query: 204 GYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE----VNWIHNQKEL 259
           G       ++V      I   P+D   + G T  L C+       +    + W  +  ++
Sbjct: 436 GKAAVTAVLDV-KDPTRIVSGPRDAEVMSGATAQLICQAEYDKSLQDSFVLVWRKDGDDI 494

Query: 260 -----TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
                   RY + ++  L+I +VA  DSG Y C AR  L     +  LTV +   + D P
Sbjct: 495 PLSVEENSRYAVADSM-LRIMNVALNDSGTYMCIARTSLDEMNATALLTVLD---VPDAP 550

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSS 372
              E+   +S              +S+ W+ GS+     +E    F +S   S    K  
Sbjct: 551 LKVEISEIRSPR-----------NISLSWVPGSDHNSSVTEFVVEFQESQWESGVWKKLQ 599

Query: 373 ELDSGQYTCRAQTELDF--------IEA-------QATLTVQVPLEAPS---NFTLIQVI 414
           ++   Q T       D         I A         T T + P  AP        IQ  
Sbjct: 600 KVPGNQATADLVLHGDLSYKFRVYAINAVGPGPPGDPTETHKTPPAAPDRNPQDIKIQGH 659

Query: 415 DAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
              +  +SW  +      G    YKV ++     E   RE +V +          FVP  
Sbjct: 660 LPHQMDISWESLPVTEQNGPGFEYKV-SYRRLGVEDQWREHMVKQSSFVVRNTSTFVPYE 718

Query: 475 KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPL-GSSAFYLKW--VKPEQPN 531
               ++ + N    GP  ++++  + E VP       A+ +  ++   + W  V P    
Sbjct: 719 ---VKIQSRNDIGWGPEPKVVTGYSGEDVPAAAPRDVAVEVFNTTVLRVSWTPVPPATVR 775

Query: 532 GVLMGYKIKYQSVKGTKVGP--LLERLPYISDP-TTTSAKLAGLEPSTKYRIHLAGYTKA 588
           G L GYK+ +  ++ + + P   L++   +S P     A + GLEP ++YR+ ++ Y K 
Sbjct: 776 GHLGGYKLHWSRLR-SLLNPNRTLDQRQSLSFPGRRAQAMVPGLEPFSEYRLTVSVYNKK 834

Query: 589 GDGAES 594
           G+G  S
Sbjct: 835 GNGPNS 840


>gi|344239683|gb|EGV95786.1| Protein sidekick-1 [Cricetulus griseus]
          Length = 1802

 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 148/490 (30%), Positives = 213/490 (43%), Gaps = 34/490 (6%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQT--IWSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
           + V   + +  L CI    P+ +    W ++GV      R++ G  ++G+ L I +   +
Sbjct: 12  RSVVAGSSETTLECIANARPVEELSLYWKRNGV------RLTSGLHSFGRRLTISNPTSA 65

Query: 98  DQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPE 154
           D G Y CE +      E       LS++  PYFT EPE  I    EE+V   C+A G+P 
Sbjct: 66  DTGLYVCEATLRGSTFEPARAKAFLSIIEPPYFTAEPESRILGEVEESVDIPCRAMGVPL 125

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           P + W  +  P+++   N R +V P+  + I+ L   D+G + C A N  G +    Y++
Sbjct: 126 PTLQWYKDAVPLNKLQ-NLRYRVLPSGSLHIQKLSPEDSGIFQCFANNEGGEIQTHTYLD 184

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNW---------IHNQKELTGG-- 262
           V   AP  T+ P D    DG T VL C V GAPKP + W         +     L  G  
Sbjct: 185 VTNIAPAFTQRPVDTTVTDGMTAVLKCEVSGAPKPAITWKRGRLLCSFVAGNLILASGSV 244

Query: 263 ---RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEV 319
              R+ +LE+G L+I  V   D+G YTC+A N   +   S  LTV   T I   PED  V
Sbjct: 245 RIPRFMLLESGGLRIAPVFIQDAGNYTCYAANTEASVNASAMLTVWNRTSIVHPPEDRVV 304

Query: 320 EAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQY 379
             G +AT  C A  DP   L  VW + +  I   S  R V   D SL ++++   D G Y
Sbjct: 305 IKGTTATLCCGATHDPRTTLRYVWKKDNMVITPSSSSRIVVEKDGSLLISQTWSGDIGDY 364

Query: 380 TCRAQTELDFIEAQATL-TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGY 438
           TC   +E       A L  +++P    +    +  + +    +SW  V P         Y
Sbjct: 365 TCEIVSEGGNDSRTARLEVIELPHPPQNLLASLSPVHSHSVTLSW--VRPFDGNSPVLYY 422

Query: 439 KVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
            VQ  +E +    +    V+  E T   V    PA     RV A N    G  S   S  
Sbjct: 423 IVQL-SENNSPWKVHLSNVSP-EMTGITVSGLTPARTYQFRVCAVNQVGKGQYSTETSRY 480

Query: 499 TPEGVPGTVQ 508
              G+PG  Q
Sbjct: 481 RLAGLPGEHQ 490



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 12/208 (5%)

Query: 397  TVQVPLE-APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIR 453
            T+Q P + AP++ T ++        + W P+      G+    GY+V+ W   D   S+ 
Sbjct: 807  TLQAPPDVAPTSIT-VRTASETSLRLRWVPLPDSQYNGNPESVGYRVKYW-RSDQPSSVL 864

Query: 454  ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEA 512
              +VN        +++    ++   R+ AFN    GP SE++   T E VP    +++ A
Sbjct: 865  AQVVNDRLERELTIEELEEWTEYELRMQAFNAIGAGPWSELVRGRTRESVPSAAPENVSA 924

Query: 513  IPLGSSAFYLKWVK-PEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
              + S+   L W   PEQ  NG+++GYKI Y++ K     P   R   +    T SA LA
Sbjct: 925  EAVSSTQILLTWASVPEQDQNGLILGYKILYRA-KDLDPEP---RSHVVRGNHTQSALLA 980

Query: 571  GLEPSTKYRIHLAGYTKAGDGAESKYLF 598
            GL     Y + +  +T+ G+G  S  L 
Sbjct: 981  GLRKFVVYELQVLAFTRIGNGVPSSPLI 1008



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 21/200 (10%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N +  + + + + +++W  V  Q   G   GYK+  +  KD +   R  +V  
Sbjct: 914  VPSAAPENVS-AEAVSSTQILLTWASVPEQDQNGLILGYKI-LYRAKDLDPEPRSHVVRG 971

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNG-PPSEIISFVTPEGVPGTVQSLEAIPLGSS 518
              + +  +           +VLAF    NG P S +I   T +  PG    L    +  +
Sbjct: 972  NHTQSALLAGLRKFVVYELQVLAFTRIGNGVPSSPLILERTKDDTPGPPVRLVFPEVRLT 1031

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGT-------KVGPLLERLPYISDPTTTSAKLAG 571
            A  + W  PE+PNGV++GY+I Y+  +G+       +VG  + +         T+ +LA 
Sbjct: 1032 AVRIVWQPPEEPNGVILGYQIAYRLARGSPHTFTTVEVGATVRQF--------TATELA- 1082

Query: 572  LEPSTKYRIHLAGYTKAGDG 591
              P + Y   L+  T+ G G
Sbjct: 1083 --PESAYIFRLSAKTRQGWG 1100



 Score = 39.3 bits (90), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 21/77 (27%), Positives = 36/77 (46%)

Query: 466  EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWV 525
            ++      +K    + AFN A +GP S+     T +  PG    L    + S+   + W 
Sbjct: 1382 KIKNLTSHTKYQVSISAFNAAGDGPKSDPRQGRTHQAAPGPPSFLAFSEITSTTLNVSWG 1441

Query: 526  KPEQPNGVLMGYKIKYQ 542
            +P   NG+L GY++ Y+
Sbjct: 1442 EPSAANGILQGYRVVYE 1458


>gi|71998006|ref|NP_001023496.1| Protein LAD-2, isoform a [Caenorhabditis elegans]
 gi|18140037|gb|AAL60232.1|AF456361_1 immunoglobulin domain-containing protein Y54G2A.25 [Caenorhabditis
           elegans]
 gi|148283960|gb|ABQ57413.1| LAD-2 long isoform [Caenorhabditis elegans]
 gi|351051345|emb|CCD83513.1| Protein LAD-2, isoform a [Caenorhabditis elegans]
          Length = 1187

 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 158/501 (31%), Positives = 239/501 (47%), Gaps = 45/501 (8%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALR-NKKVELFCIFGGTPLPQ 64
           R EY+ G+RI L+     I  SQ++  P ++      EV +R   +++L CIFGG PLP 
Sbjct: 214 RGEYRSGDRIQLD-----IEPSQDKSHPVKKMSVSPSEVTVRAGGQLKLQCIFGGRPLPT 268

Query: 65  TIWSK-DGVPINPSDRIS-----QGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSI 118
             WSK DG    P  RI      + ++G+SLI+++V   D G+Y C      G    +++
Sbjct: 269 IFWSKIDGEL--PKSRIKDLTSHESDFGRSLIVENVHPDDAGAYECR-----GRHLVHTV 321

Query: 119 DLSVLAAPYFTVEP-EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR-K 176
           ++ V+AAP++  +P   I+  EE T   EC A G P P I W  NGK + +   + RR  
Sbjct: 322 NVRVMAAPFWEFDPPRDISLPEESTGELECLAGGQPTPIITWSMNGKFLHELAEDSRRVL 381

Query: 177 VGPNRIT-IENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEAPKDEYTVDG 233
           +   RI  + NL    DTG Y CNA+N LGYV+ + +V+V AHAP     A +    V  
Sbjct: 382 LDHGRILRVRNLNHDLDTGVYQCNASNPLGYVFANAFVHVRAHAPFFRMPAARHWKVVLH 441

Query: 234 KTVVLTCRVFGAPKPEVNWIHNQK---ELTGGRYTILETGDLKITDVAFADSGEYTCFAR 290
            TVVL C V  AP+  V W+       ++  G+  +       + DV  AD G Y C   
Sbjct: 442 STVVLDCDVDAAPEAMVRWVDADDRPLQVVEGKNKLFPNHTFMVYDVNSADEGLYYCNVS 501

Query: 291 NKLGTAQGSGSLTVKEHTHITD--QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
           NK G  + +  L V + T+      P+   +EAG++A   C AV+DP L +   W    +
Sbjct: 502 NKYGINRATNRLQVFKPTYFVRIPTPKRLILEAGETAEVFCEAVADPRLPIRYQWTINGK 561

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNF 408
            +   +E ++ +     L         SG   C A T++D   A   L V+   + P++ 
Sbjct: 562 VL---TESQYYEILPDRLRFRSVRGRHSGIIDCAAITDVDVKLASMQLIVK---DVPAHP 615

Query: 409 TL-IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE-KDGEGSI--RELIVNKGESTT 464
            +       +KA V W  V+        + Y V+ +T+ K  E  +   E+ VNK    T
Sbjct: 616 VVETAHCSERKATVKW--VAASDHGDSIKKYIVEMFTDFKKNEWEVINEEVNVNK---ET 670

Query: 465 TEVDKFVPASKNFA-RVLAFN 484
            EVD  +    N+  RV+A N
Sbjct: 671 FEVDITLTPWVNYTFRVVAVN 691



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 98/194 (50%), Gaps = 13/194 (6%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP EAP +F +   I+      +WNPV   ++ GHF GY+++ W     E +IR+  +  
Sbjct: 819  VPDEAPRDFHIDTQINFTTINFTWNPVDANTVNGHFVGYEIEYWK---AENTIRKYSIKI 875

Query: 460  GESTTTEVDKFVPASKNF-ARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSS 518
              ++T +V     A  N+ A +   N      PS+ +SF  PEG PG V +L    +GS+
Sbjct: 876  PANSTYKVINSFHAVTNYSAHIRTRNKRLRSAPSDYVSFAMPEGPPGKVHNLRVYSVGST 935

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKG-TKVGPLLERLPYISDPTTTSAKLAGLEPSTK 577
            A  L+W  P QPNG + GY I +Q+ K  T+   ++ R  +     +        EP T 
Sbjct: 936  AILLQWDAPLQPNGRIRGYFISFQNEKNETEETYVIHRQKHYLHEKS--------EPDTG 987

Query: 578  YRIHLAGYTKAGDG 591
            Y++ +   T+AG+G
Sbjct: 988  YKVSVWAETRAGEG 1001



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 44/78 (56%)

Query: 601 PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ 660
           P+ NP  V+G G+ P+NLVISW  +     NAP+ +Y + ++       W +  V D   
Sbjct: 718 PYTNPTGVKGEGTEPDNLVISWKPLDRYYWNAPNMQYLVRYKLDEPIHGWTEFLVEDSLA 777

Query: 661 SELVLANQPTFQPYEIKV 678
           +  ++ +QPTF+ Y I+V
Sbjct: 778 NFTIIRDQPTFRKYLIQV 795


>gi|147898733|ref|NP_001079338.1| contactin 1 precursor [Xenopus laevis]
 gi|1843425|dbj|BAA13100.1| contactin/F3/F11 [Xenopus laevis]
          Length = 1005

 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 198/744 (26%), Positives = 320/744 (43%), Gaps = 101/744 (13%)

Query: 22  TGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS 81
           T  S    R+ P    V  K   AL+++ V L C   G P+P   W K    +  S  IS
Sbjct: 217 TDTSEKPKRYTPVIN-VKFKDTRALKDQNVTLECFALGNPVPVITWRKINEAMPASADIS 275

Query: 82  QGNYGKSLIIKHVEFSDQGSYTCEVSN--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAE 139
               G  L I +V+  D+G+Y CE  N  G+   ++Y   + V   P +    E IN  E
Sbjct: 276 MS--GAVLKIFNVQPEDEGTYECEAKNIKGLDNHRAY---VYVEGVPEWV---EHINDTE 327

Query: 140 EET---VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
            +    + + C A G P+P I W+ +G P            G   I  + L   D G Y 
Sbjct: 328 RDIGSDLHWACVARGKPQPSIRWLKDGAP-----------YGKGDIIKKGLTLEDAGMYQ 376

Query: 197 CNATNSLGYVYKDVYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           C A N  G +Y +  + +LA AP  E T   K      G  V++ C+   APK + +W  
Sbjct: 377 CIAENIHGIIYANAELKILALAPTFEFTPMRKKVLAAKGGRVIIECKPKAAPKAKFSWSK 436

Query: 255 NQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
             + L    R +I + G L+IT++   D G YTCFA N  G A  +G ++V   T IT  
Sbjct: 437 GTELLINNSRVSIWDDGSLEITNITKFDEGSYTCFAENDRGKANSTGIVSVTAATKITLA 496

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP----RFVQSNDYSLTVT 369
           P + +V  G++AT +C+A  DP+L+L+ +W     PI+F+ E     R +++   S  V 
Sbjct: 497 PSNADVTVGENATMQCHASHDPTLELTFIWALNGFPIEFDKEDGHYERAIRNVVGSELVI 556

Query: 370 KSSEL-DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWN---- 424
           K+++L  +G+YTC AQT +D   A A L V+ P   P    + ++ D     ++W+    
Sbjct: 557 KNAQLIHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGVRVEEIRDT-SVKLTWSSGTD 615

Query: 425 ---PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 481
              P+S  +++   +    + W +   E    E     G      V   +P      RV+
Sbjct: 616 NHQPISKYNIQA--QNILSEDWKDVKTENPNIE-----GNMEMARVIDLIPWMDYEFRVI 668

Query: 482 AFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSS--AFYLKW--VKPEQPNGVLMGY 537
           A N    G PS     +  EG    V   E    G S     + W  +  E   G   GY
Sbjct: 669 ATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGSNRELTITWQPLSREYHYGDGFGY 728

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTS--AKLAGLEPSTKYRIHLAGYTKAGDGAESK 595
            + ++   G +      R   +++P +     K   + P+T++++ +  + K G+G  S 
Sbjct: 729 GVAFKPFNGREW-----RKVIVTNPESGHYVHKDDTITPATQFQVKVKAFNKIGEGPYS- 782

Query: 596 YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDV 655
                                + V+ ++A  ++   AP            T   +N   +
Sbjct: 783 ---------------------STVVVYSA-EDVPTEAP------------TAVVYN---I 805

Query: 656 LDWRQSELVLANQPTFQ-PYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 714
           L    SE+ +A  P ++   E   V+ W  +D E +   + V K    TT ++  +P + 
Sbjct: 806 LS--SSEVSVAWHPVYEKSIEGYQVRYWRIQDKEAAAHRVQV-KASDITTRLEGLMPNTH 862

Query: 715 NFARVLAFNGAYNGPPSEIISFVT 738
               V AFN A +GPPS+ ++F+T
Sbjct: 863 YNIEVRAFNSAGDGPPSKTLTFLT 886



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 152/634 (23%), Positives = 256/634 (40%), Gaps = 84/634 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH-VEFSDQGSYTCEVSNGVGEA 113
           C+  G P P   W KDG P           YGK  IIK  +   D G Y C   N  G  
Sbjct: 338 CVARGKPQPSIRWLKDGAP-----------YGKGDIIKKGLTLEDAGMYQCIAENIHGII 386

Query: 114 KSYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAP 170
            + + +L +LA AP F   P  + + AA+   V  ECK    P+ +  W    + +    
Sbjct: 387 YA-NAELKILALAPTFEFTPMRKKVLAAKGGRVIIECKPKAAPKAKFSWSKGTELLIN-- 443

Query: 171 PNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
            N R  +  +  + I N+ K D G+Y C A N  G       V+V A A +IT AP +  
Sbjct: 444 -NSRVSIWDDGSLEITNITKFDEGSYTCFAENDRGKANSTGIVSVTA-ATKITLAPSNAD 501

Query: 230 TVDGKTVVLTCRVFGAPKPEVN--WIHN----QKELTGGRYTI----LETGDLKITDVAF 279
              G+   + C     P  E+   W  N    + +   G Y      +   +L I +   
Sbjct: 502 VTVGENATMQCHASHDPTLELTFIWALNGFPIEFDKEDGHYERAIRNVVGSELVIKNAQL 561

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
             +G YTC A+  +  +  S  L V+            E+              D S+KL
Sbjct: 562 IHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGVRVEEIR-------------DTSVKL 608

Query: 340 SIVWLRGS---EPID-FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE---- 391
           +  W  G+   +PI  +  + + + S D+    T++  ++      R    + +++    
Sbjct: 609 T--WSSGTDNHQPISKYNIQAQNILSEDWKDVKTENPNIEGNMEMARVIDLIPWMDYEFR 666

Query: 392 --AQATLTVQVP-LEAPSNFT-----LIQVIDA-------KKAVVSWNPVSPQSLRGHFR 436
             A  TL V  P L +P   T     ++   +        ++  ++W P+S +   G   
Sbjct: 667 VIATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGSNRELTITWQPLSREYHYGDGF 726

Query: 437 GYKVQTWTEKDGEGSIRELIVNKGES--TTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
           GY V  +   +G    R++IV   ES     + D   PA++   +V AFN    GP S  
Sbjct: 727 GYGV-AFKPFNGR-EWRKVIVTNPESGHYVHKDDTITPATQFQVKVKAFNKIGEGPYSST 784

Query: 495 ISFVTPEGVPGTVQSLEAIP-LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
           +   + E VP    +      L SS   + W    + +  + GY+++Y  ++  +     
Sbjct: 785 VVVYSAEDVPTEAPTAVVYNILSSSEVSVAWHPVYEKS--IEGYQVRYWRIQDKEAAAHR 842

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDN----VE 609
            ++   SD TT   +L GL P+T Y I +  +  AGDG  SK L ++  K P +    + 
Sbjct: 843 VQVK-ASDITT---RLEGLMPNTHYNIEVRAFNSAGDGPPSKTLTFLTKKAPPSQIPQIT 898

Query: 610 GRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
                 +  +I+W  +  + + +    Y++ +R+
Sbjct: 899 SAVRYGSQYIITWEHVVPLSNESAVNGYKVLYRQ 932



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 141/354 (39%), Gaps = 36/354 (10%)

Query: 72  VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA------- 124
           V ++P +R        +L I  VE  D+G+Y+C VS+       +S  +S+L        
Sbjct: 163 VFLSPDNRRFVTQTNGNLYIAKVEHLDRGNYSCFVSSPSVTKSVFSKFISLLPQTDTSEK 222

Query: 125 ----APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA-PPNPRRKVGP 179
                P   V+ +   A +++ VT EC A G P P I W    + I++A P +    +  
Sbjct: 223 PKRYTPVINVKFKDTRALKDQNVTLECFALGNPVPVITW----RKINEAMPASADISMSG 278

Query: 180 NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLT 239
             + I N++  D G Y C A N  G      YV V    PE  E   D     G  +   
Sbjct: 279 AVLKIFNVQPEDEGTYECEAKNIKGLDNHRAYVYVEG-VPEWVEHINDTERDIGSDLHWA 337

Query: 240 CRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGS 299
           C   G P+P + W+ +     G  Y     GD+    +   D+G Y C A N  G    +
Sbjct: 338 CVARGKPQPSIRWLKD-----GAPYG---KGDIIKKGLTLEDAGMYQCIAENIHGIIYAN 389

Query: 300 GSLTVKEHT---HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
             L +         T   +      G      C   + P  K S  W +G+E +   S  
Sbjct: 390 AELKILALAPTFEFTPMRKKVLAAKGGRVIIECKPKAAPKAKFS--WSKGTELLINNS-- 445

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTL 410
           R    +D SL +T  ++ D G YTC A+ +      +A  T  V + A +  TL
Sbjct: 446 RVSIWDDGSLEITNITKFDEGSYTCFAEND----RGKANSTGIVSVTAATKITL 495



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 90/370 (24%), Positives = 137/370 (37%), Gaps = 40/370 (10%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           KV + C   G P P   W K+ + I+  +       G  +I    ++ D G Y C VSN 
Sbjct: 44  KVSVNCRARGNPPPIYKWRKNNLEIDLLNEHYSLVGGNLVINNPDKYKDSGRYVCIVSNI 103

Query: 110 VGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI------HWVHN 162
            G+  S    L+     P+ T E   +   E       C     P P +       W+ N
Sbjct: 104 YGKVWSREATLNFGYLDPFPTEERYEVKVKEGTGAVLICD----PPPHVPDDLNYRWLLN 159

Query: 163 GKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE- 220
             P+  +P N R     N  + I  +   D GNY C  ++    V K V+   ++  P+ 
Sbjct: 160 EFPVFLSPDNRRFVTQTNGNLYIAKVEHLDRGNYSCFVSSP--SVTKSVFSKFISLLPQT 217

Query: 221 -ITEAP-----------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE 268
             +E P           KD   +  + V L C   G P P + W    + +       + 
Sbjct: 218 DTSEKPKRYTPVINVKFKDTRALKDQNVTLECFALGNPVPVITWRKINEAMPASADISMS 277

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
              LKI +V   D G Y C A+N  G       + V+      +   D E + G    + 
Sbjct: 278 GAVLKIFNVQPEDEGTYECEAKNIKGLDNHRAYVYVEGVPEWVEHINDTERDIGSDLHWA 337

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A   P  + SI WL+   P     +   ++     LT+      D+G Y C A+    
Sbjct: 338 CVARGKP--QPSIRWLKDGAPY---GKGDIIKK---GLTLE-----DAGMYQCIAENIHG 384

Query: 389 FIEAQATLTV 398
            I A A L +
Sbjct: 385 IIYANAELKI 394



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 17/195 (8%)

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
           VP EAP+   +  ++ + +  V+W+PV  +S+ G    Y+V+ W  +D E +   + V K
Sbjct: 793 VPTEAPTA-VVYNILSSSEVSVAWHPVYEKSIEG----YQVRYWRIQDKEAAAHRVQV-K 846

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
               TT ++  +P +     V AFN A +GPPS+ ++F+T +  P  +  + +     S 
Sbjct: 847 ASDITTRLEGLMPNTHYNIEVRAFNSAGDGPPSKTLTFLTKKAPPSQIPQITSAVRYGSQ 906

Query: 520 FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTK 577
           + + W  V P      + GYK+ Y+   G + G L     +       S +L   E    
Sbjct: 907 YIITWEHVVPLSNESAVNGYKVLYRQ-DGQRDGKLYSTRKH-------SVELPVPEEGV- 957

Query: 578 YRIHLAGYTKAGDGA 592
           Y + +  +++ GDGA
Sbjct: 958 YVVEVRAHSEGGDGA 972



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 108/282 (38%), Gaps = 36/282 (12%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A G P P   W  N   I     +    VG N +   
Sbjct: 31  PIDTIFPE---ESTEGKVSVNCRARGNPPPIYKWRKNNLEIDLLNEH-YSLVGGNLVINN 86

Query: 186 NLRKSDTGNYGCNATNSLGYVY-KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFG 244
             +  D+G Y C  +N  G V+ ++  +N     P  TE   +    +G   VL C    
Sbjct: 87  PDKYKDSGRYVCIVSNIYGKVWSREATLNFGYLDPFPTEERYEVKVKEGTGAVLICD--- 143

Query: 245 APKPEV------NWIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCFARN-KL 293
            P P V       W+ N+  +       R+     G+L I  V   D G Y+CF  +  +
Sbjct: 144 -PPPHVPDDLNYRWLLNEFPVFLSPDNRRFVTQTNGNLYIAKVEHLDRGNYSCFVSSPSV 202

Query: 294 GTAQGSGSLTVKEHTHITDQPEDY-----------EVEAGQSATFRCNAVSDPSLKLSIV 342
             +  S  +++   T  +++P+ Y                Q+ T  C A+ +P     I 
Sbjct: 203 TKSVFSKFISLLPQTDTSEKPKRYTPVINVKFKDTRALKDQNVTLECFALGNPV--PVIT 260

Query: 343 WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           W + +E +   ++   +  +   L +      D G Y C A+
Sbjct: 261 WRKINEAMPASAD---ISMSGAVLKIFNVQPEDEGTYECEAK 299


>gi|338714495|ref|XP_003363092.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
           [Equus caballus]
          Length = 1225

 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 181/713 (25%), Positives = 305/713 (42%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G Y C 
Sbjct: 269 LKGETLLLECFAEGLPTPQVDWNKLGGDL-PKGRETKENYGKTLKIENVSYRDKGIYRCT 327

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            +N +G A ++   ++V   P +T +P+    +   +    C+A G PEP I W  NG P
Sbjct: 328 ANNFLGSA-THDFHITVEEPPRWTKKPQSGVYSTGSSGILLCEAEGEPEPTIKWRVNGSP 386

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEA 224
           I + P      V    I+  NL+ + T  Y C A+N+ G +  +  ++V+   P I TE 
Sbjct: 387 IEKNP-FAGDVVSSREISFTNLQPNHTAVYQCEASNAHGTILANANIDVVDVRPLIQTED 445

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            ++  TV G +  L C  F +P+  V+W  +   K L G RY I E G L+I      D+
Sbjct: 446 EENYATVVGYSAFLYCEFFSSPEAIVSWQKVEEAKPLEGRRYHIYENGTLQINRTTEEDA 505

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N  G    + +L ++  T +   P++  V    +   RC +  D  LK  L 
Sbjct: 506 GSYSCWVENAKGKTAVTANLDIRNATKLRISPKNPRVPRSHTLELRCESTCDSYLKHSLK 565

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y+C AQT LD +     +T+ 
Sbjct: 566 LSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDKGIYSCSAQTALDSVADITQVTIL 625

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +      +   Y V+    K+  G   EL   +
Sbjct: 626 DVPDPPENLHLSERQN-RSVRLTWE--AGDDHNSNISEYIVEFEGNKEEPGRWEELTRVQ 682

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 683 GKETTVLL-SLAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQP 741

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 742 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPT 792

Query: 576 T--KYRIHLAGYTKAGDGAESK-YLFYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +      G G E +  + Y     PD    + G     + LV ++W+++P+ 
Sbjct: 793 VYAPYDVQVQAVNHLGSGPEPQSVVLYSGEDYPDTAPVIHGVDVINSTLVKVTWSSIPKD 852

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ +++        
Sbjct: 853 RVHGHLKGYQINW--------WKTKSLLDGRT-----------HPKEVNILRF------- 886

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+ +   V      S+    VLA+N    GP SE  +F TPEG
Sbjct: 887 ---------SGQRSYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYTFQTPEG 930



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 134/575 (23%), Positives = 233/575 (40%), Gaps = 51/575 (8%)

Query: 53   LFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L+C F  +P     W K  +  P+    R        +L I      D GSY+C V N  
Sbjct: 459  LYCEFFSSPEAIVSWQKVEEAKPL--EGRRYHIYENGTLQINRTTEEDAGSYSCWVENAK 516

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA---SGLPEP-EIHWVHNGKPI 166
            G+  + + +L +  A    + P+        T+   C++   S L    ++ W  +G+  
Sbjct: 517  GKT-AVTANLDIRNATKLRISPKNPRVPRSHTLELRCESTCDSYLKHSLKLSWSKDGEAF 575

Query: 167  S-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
                  + R  +    +TI N+   D G Y C+A  +L  V     V +L    ++ + P
Sbjct: 576  EINGTEDGRIIIDGANLTISNVTLEDKGIYSCSAQTALDSVADITQVTIL----DVPDPP 631

Query: 226  KDEYTVD--GKTVVLTCRVFGAPKPE-----VNWIHNQKELTGGRYTILETGDLKITDVA 278
            ++ +  +   ++V LT               V +  N++E   GR+  L     K T V 
Sbjct: 632  ENLHLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEE--PGRWEELTRVQGKETTVL 689

Query: 279  FADSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSAT------ 326
             + +     ++   A N++G +Q S      E         P++  V+A Q         
Sbjct: 690  LSLAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWE 749

Query: 327  -FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
              +    + P L+  + W     P+++E E       +++L V   +         +A  
Sbjct: 750  PLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TVTNHTLRVMTPTVYAPYDVQVQAVN 805

Query: 386  ELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKAVVSWNPVSPQSLRGHFRGYKVQT 442
             L       ++ +    + P    +I    VI++    V+W+ +    + GH +GY++  
Sbjct: 806  HLGSGPEPQSVVLYSGEDYPDTAPVIHGVDVINSTLVKVTWSSIPKDRVHGHLKGYQINW 865

Query: 443  WTEK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
            W  K   DG    +E+ + +  G+ +   V      S+    VLA+N    GP SE  +F
Sbjct: 866  WKTKSLLDGRTHPKEVNILRFSGQRSYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYTF 925

Query: 498  VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERL 556
             TPEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T +VG L +  
Sbjct: 926  QTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGNLTGYLLQYQIINDTYEVGELNDI- 984

Query: 557  PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
              I+ P+  S  L  L  +TKY+ +L   T  G G
Sbjct: 985  -NITTPSQPSWHLRNLNAATKYKFYLRACTSKGCG 1018



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 164/429 (38%), Gaps = 60/429 (13%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P   W+KD  P N SD   I   N G   I      S  QG Y C  SN
Sbjct: 54  QIECEAKGNPEPTFTWTKDDKPFNLSDPQIIVSNNSGTFKIPNEGHISHFQGKYRCFASN 113

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKP 165
            +G A S  I+  V   P F  E  E +   E + +   C    GLP   I+W++   + 
Sbjct: 114 KLGVAVSEEIEFIVPNVPKFPKEKIEPLEVEEGDAIVLPCNPPKGLPPLHIYWMNIELEH 173

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA- 218
           I Q       + G   +   N+ + D+ N Y C A        +  +   + VN L H  
Sbjct: 174 IEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHVN 231

Query: 219 -------------------PEITEAPKDE------YTVDGKTVVLTCRVFGAPKPEVNWI 253
                              P +   P +         + G+T++L C   G P P+V+W 
Sbjct: 232 DSSSSTEIGSKANSIKQRKPRLLLPPPESGGESSLTILKGETLLLECFAEGLPTPQVDWN 291

Query: 254 HNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD 312
               +L  GR T    G  LKI +V++ D G Y C A N LG+A     +TV+E    T 
Sbjct: 292 KLGGDLPKGRETKENYGKTLKIENVSYRDKGIYRCTANNFLGSATHDFHITVEEPPRWTK 351

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP---RFVQSNDYSL--- 366
           +P+      G S    C A  +P  + +I W     PI  E  P     V S + S    
Sbjct: 352 KPQSGVYSTGSSGILLCEAEGEP--EPTIKWRVNGSPI--EKNPFAGDVVSSREISFTNL 407

Query: 367 ----TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDAK 417
               T     E  +   T  A   +D ++ +  +  +       +   S F   +   + 
Sbjct: 408 QPNHTAVYQCEASNAHGTILANANIDVVDVRPLIQTEDEENYATVVGYSAFLYCEFFSSP 467

Query: 418 KAVVSWNPV 426
           +A+VSW  V
Sbjct: 468 EAIVSWQKV 476



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 114/309 (36%), Gaps = 47/309 (15%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPN--PRRKVGPNRITIENLRKSDTGNYGC 197
           +E    EC+A G PEP   W  + KP + + P        G  +I  E       G Y C
Sbjct: 50  DEYFQIECEAKGNPEPTFTWTKDDKPFNLSDPQIIVSNNSGTFKIPNEGHISHFQGKYRC 109

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN 255
            A+N LG    +    ++ + P+  +   +   V +G  +VL C    G P   + W++ 
Sbjct: 110 FASNKLGVAVSEEIEFIVPNVPKFPKEKIEPLEVEEGDAIVLPCNPPKGLPPLHIYWMNI 169

Query: 256 QKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTH 309
           + E      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV    H
Sbjct: 170 ELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKH 229

Query: 310 ITDQPEDYEVEA-----------------------------GQSATFRCNAVSDPSLKLS 340
           + D     E+ +                             G++    C A   P+ ++ 
Sbjct: 230 VNDSSSSTEIGSKANSIKQRKPRLLLPPPESGGESSLTILKGETLLLECFAEGLPTPQVD 289

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
              L G  P   E++  + +    +L +   S  D G Y C A   L      AT    +
Sbjct: 290 WNKLGGDLPKGRETKENYGK----TLKIENVSYRDKGIYRCTANNFL----GSATHDFHI 341

Query: 401 PLEAPSNFT 409
            +E P  +T
Sbjct: 342 TVEEPPRWT 350


>gi|156400888|ref|XP_001639024.1| predicted protein [Nematostella vectensis]
 gi|156226149|gb|EDO46961.1| predicted protein [Nematostella vectensis]
          Length = 1874

 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 197/740 (26%), Positives = 296/740 (40%), Gaps = 110/740 (14%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPI-NPSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVSN 108
           V + C   G+P+P   W K+G  I N   +I    YG  + I  +     + +Y CE  N
Sbjct: 18  VYMICNVTGSPMPTLTWYKNGSVIRNSRIQIFTMPYGGLIRIGPLRAKIHKATYECEADN 77

Query: 109 GVGEAKSYSIDLSVLAA-------PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVH 161
           GVG     S  L V  A       P     P F      + VTF C A G P P I W  
Sbjct: 78  GVGPPLRDSSTLIVHTASTKPAGFPRIAKHPSFKQRRSGDDVTFTCAAVGTPTPNITWFK 137

Query: 162 NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD----------VY 211
           +  PI    P         ++ I +LR+SD G Y C A N+LG V+            + 
Sbjct: 138 DRLPIVLNDPRVSVLSDGRKLRITDLRESDNGKYSCVARNALGMVFSSQAMPARLFIYLT 197

Query: 212 VNVLAHAPEITEAPKDEYTVDGKT-VVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETG 270
           ++V+   PE T  P+D+ TVD  T V L C   G+P P + W  +   ++G      + G
Sbjct: 198 LSVVRSKPEFTLRPQDK-TVDPDTDVELKCSARGSPTPSIVWEVDGSRISG------QNG 250

Query: 271 DLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN 330
           +L I  +    SG Y+C A + +G  Q    +TV+       +P               N
Sbjct: 251 ELIIRGIQ--RSGNYSCIADSNMGRVQAYAYVTVRLLPFAPSRP---------------N 293

Query: 331 AVSDPSLKLSIVWL-RGSEPI-DFESEPRFVQSNDY----------SLTVTKSSELDSGQ 378
           A S  S  + I W  RG+  +  +E + R     ++          SL V+      S +
Sbjct: 294 AASITSDAIKITWHPRGAHVVTSYEVQYRLKGKTEWQEITNVRGMQSLVVSGLRPFSSYE 353

Query: 379 YTCRAQTELDF----IEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
           +   A   L      + A+ T +   P  AP N   + V D       W P  P S  G 
Sbjct: 354 FRVFAVNSLGRSRPSLMAEYTTSETKPGSAPRNIEAMGVSDTSFKA-GWLP--PISANGR 410

Query: 435 FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
            RGY++  +   D    I +       + +T V      + +F R+LA+N A +GP SE+
Sbjct: 411 IRGYRL--YYSLDLLEDISQWRFMASSTNSTTVTGLTRQTTHFFRILAYNIAGDGPLSEV 468

Query: 495 ISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVK---GTKVGP 551
           ++  T +GVPG  +S++   L S+A  + W  P  P   + GY + Y   K    T +G 
Sbjct: 469 VAVKTQKGVPGQPRSVQLSVLSSTAIRVTWSPPRYPGDGIFGYDVYYNKSKQDMDTVIGA 528

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPD 606
                         + ++ GL P T Y++ +A  +  G G  S  L        P   P 
Sbjct: 529 F----------QMNTKEIMGLTPYTVYKVAVAAKSDKGVGPMSFVLTARTDEDRPSDAPQ 578

Query: 607 NVEGRGSTPNNLVISWTAMPEIEHN---APHF--KYRIFWRRHNTGEAWNQDDVLDWRQS 661
           N++GR      L ISW   P  EH      HF  KYR        G+   +   +D  ++
Sbjct: 579 NIQGRSRDSTTLEISWDP-PRPEHRNGLITHFTIKYRA------KGQRGAKYLTVDATKT 631

Query: 662 ELVLANQPTFQPYEIKVVQTWTEKDG---------------EGSIRELIVNKGESTTTEV 706
            +VL N   F  Y I V  +  + DG                G+ R++ +    STT  V
Sbjct: 632 SVVLHNLDKFTNYFIWVQASTKQGDGPFSDKHTVSTAEDVPNGAPRDVRIRVHNSTTMTV 691

Query: 707 DKFVPASKNFARVLAFNGAY 726
               P +K   ++L +   Y
Sbjct: 692 KWNPPTTKQDGKILGYMVFY 711



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 134/535 (25%), Positives = 216/535 (40%), Gaps = 76/535 (14%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA-------PPNPRRKVG 178
           P  T+ P+         V   C  +G P P + W  NG  I  +       P     ++G
Sbjct: 1   PTVTLTPKDFAGVTRGFVYMICNVTGSPMPTLTWYKNGSVIRNSRIQIFTMPYGGLIRIG 60

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA-------PEITEAPKDEYTV 231
           P R  I          Y C A N +G   +D    ++  A       P I + P  +   
Sbjct: 61  PLRAKIHK------ATYECEADNGVGPPLRDSSTLIVHTASTKPAGFPRIAKHPSFKQRR 114

Query: 232 DGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETG-DLKITDVAFADSGEYTCF 288
            G  V  TC   G P P + W  ++    L   R ++L  G  L+ITD+  +D+G+Y+C 
Sbjct: 115 SGDDVTFTCAAVGTPTPNITWFKDRLPIVLNDPRVSVLSDGRKLRITDLRESDNGKYSCV 174

Query: 289 ARNKLGTAQGSGSL-----------TVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
           ARN LG    S ++            V+     T +P+D  V+       +C+A   P+ 
Sbjct: 175 ARNALGMVFSSQAMPARLFIYLTLSVVRSKPEFTLRPQDKTVDPDTDVELKCSARGSPT- 233

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
             SIVW         E +   +   +  L +       SG Y+C A + +  ++A A +T
Sbjct: 234 -PSIVW---------EVDGSRISGQNGELIIRGIQR--SGNYSCIADSNMGRVQAYAYVT 281

Query: 398 VQVPLEAPSNFTLIQVI-DAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
           V++   APS      +  DA K  ++W+P     +  +   Y+++  TE     ++R + 
Sbjct: 282 VRLLPFAPSRPNAASITSDAIK--ITWHPRGAHVVTSYEVQYRLKGKTEWQEITNVRGM- 338

Query: 457 VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEAIPL 515
                  +  V    P S    RV A N      PS +  + T E  PG+  +++EA+ +
Sbjct: 339 ------QSLVVSGLRPFSSYEFRVFAVNSLGRSRPSLMAEYTTSETKPGSAPRNIEAMGV 392

Query: 516 GSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD-----PTTTSAKLA 570
             ++F   W+ P   NG + GY++ Y           L+ L  IS       +T S  + 
Sbjct: 393 SDTSFKAGWLPPISANGRIRGYRLYYS----------LDLLEDISQWRFMASSTNSTTVT 442

Query: 571 GLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAM 625
           GL   T +   +  Y  AGDG  S+    V  K    V G+  +    V+S TA+
Sbjct: 443 GLTRQTTHFFRILAYNIAGDGPLSE---VVAVKTQKGVPGQPRSVQLSVLSSTAI 494



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 132/556 (23%), Positives = 209/556 (37%), Gaps = 113/556 (20%)

Query: 219 PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGR---YTILETGDLKIT 275
           P +T  PKD   V    V + C V G+P P + W  N   +   R   +T+   G ++I 
Sbjct: 1   PTVTLTPKDFAGVTRGFVYMICNVTGSPMPTLTWYKNGSVIRNSRIQIFTMPYGGLIRIG 60

Query: 276 DV-AFADSGEYTCFARNKLG-TAQGSGSLTVKEHT-------HITDQPEDYEVEAGQSAT 326
            + A      Y C A N +G   + S +L V   +        I   P   +  +G   T
Sbjct: 61  PLRAKIHKATYECEADNGVGPPLRDSSTLIVHTASTKPAGFPRIAKHPSFKQRRSGDDVT 120

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF-VQSNDYSLTVTKSSELDSGQYTCRAQT 385
           F C AV  P+   +I W +   PI   ++PR  V S+   L +T   E D+G+Y+C A+ 
Sbjct: 121 FTCAAVGTPT--PNITWFKDRLPIVL-NDPRVSVLSDGRKLRITDLRESDNGKYSCVARN 177

Query: 386 ELDFI-EAQAT-------LTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRG 437
            L  +  +QA        LT+ V    P  FTL      +    + +P +   L+   RG
Sbjct: 178 ALGMVFSSQAMPARLFIYLTLSVVRSKP-EFTL------RPQDKTVDPDTDVELKCSARG 230

Query: 438 YKVQT--WTEKDG---EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 492
               +  W E DG    G   ELI+   + +    +    A  N  RV A+         
Sbjct: 231 SPTPSIVW-EVDGSRISGQNGELIIRGIQRSG---NYSCIADSNMGRVQAY--------- 277

Query: 493 EIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG--VLMGYKIKYQSVKGTKVG 550
              ++VT   +P       A  + S A  + W     P G  V+  Y+++Y+ +KG    
Sbjct: 278 ---AYVTVRLLPFAPSRPNAASITSDAIKITW----HPRGAHVVTSYEVQYR-LKGKT-- 327

Query: 551 PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNP 605
              E     +     S  ++GL P + Y   +      G    S    Y      P   P
Sbjct: 328 ---EWQEITNVRGMQSLVVSGLRPFSSYEFRVFAVNSLGRSRPSLMAEYTTSETKPGSAP 384

Query: 606 DNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVL 665
            N+E  G +  +    W  +P I  N     YR+++           +D+  WR      
Sbjct: 385 RNIEAMGVSDTSFKAGW--LPPISANGRIRGYRLYYSLDLL------EDISQWR------ 430

Query: 666 ANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 725
                                        + +   STT  V      + +F R+LA+N A
Sbjct: 431 ----------------------------FMASSTNSTT--VTGLTRQTTHFFRILAYNIA 460

Query: 726 YNGPPSEIISFVTPEG 741
            +GP SE+++  T +G
Sbjct: 461 GDGPLSEVVAVKTQKG 476



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 127/582 (21%), Positives = 223/582 (38%), Gaps = 74/582 (12%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
           VEL C   G+P P  +W  DG       RIS  N    LII+ ++ S  G+Y+C   + +
Sbjct: 222 VELKCSARGSPTPSIVWEVDG------SRISGQN--GELIIRGIQRS--GNYSCIADSNM 271

Query: 111 GEAKSYSIDLSVLAAPYFTVEPEFINAAEEET-VTFECK-ASGLPEPEIHWVHNGKPISQ 168
           G  ++Y+  ++V   P+    P   +   +   +T+  + A  +   E+ +   GK   Q
Sbjct: 272 GRVQAYAY-VTVRLLPFAPSRPNAASITSDAIKITWHPRGAHVVTSYEVQYRLKGKTEWQ 330

Query: 169 APPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
              N R   G   + +  LR   +  +   A NSLG     +         +   AP++ 
Sbjct: 331 EITNVR---GMQSLVVSGLRPFSSYEFRVFAVNSLGRSRPSLMAEYTTSETKPGSAPRN- 386

Query: 229 YTVDGKTVVLTCRVFG-APKPEVNW----------IHNQKELTGGRYTILETGDLKITDV 277
             ++   V  T    G  P    N           +   ++++  R+    T    +T +
Sbjct: 387 --IEAMGVSDTSFKAGWLPPISANGRIRGYRLYYSLDLLEDISQWRFMASSTNSTTVTGL 444

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC-----NAV 332
               +  +   A N  G    S  + VK    +  QP   ++    S   R         
Sbjct: 445 TRQTTHFFRILAYNIAGDGPLSEVVAVKTQKGVPGQPRSVQLSVLSSTAIRVTWSPPRYP 504

Query: 333 SDPSLKLSIVWLRGSEPID-----FESEPRFVQS----NDYSLTVTKSSELDSG--QYTC 381
            D      + + +  + +D     F+   + +        Y + V   S+   G   +  
Sbjct: 505 GDGIFGYDVYYNKSKQDMDTVIGAFQMNTKEIMGLTPYTVYKVAVAAKSDKGVGPMSFVL 564

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            A+T+ D            P +AP N    +  D+    +SW+P  P+   G    + ++
Sbjct: 565 TARTDED-----------RPSDAPQNIQG-RSRDSTTLEISWDPPRPEHRNGLITHFTIK 612

Query: 442 TWTEKDGEGSIRELIVNKGESTTT--EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
                 G+   + L V+  +++     +DKF   +  F  V A     +GP S+  +  T
Sbjct: 613 Y--RAKGQRGAKYLTVDATKTSVVLHNLDKF---TNYFIWVQASTKQGDGPFSDKHTVST 667

Query: 500 PEGVP-GTVQSLEAIPLGSSAFYLKWVKPE-QPNGVLMGYKIKYQSV--KGTKVGPLLER 555
            E VP G  + +      S+   +KW  P  + +G ++GY + Y  V  +G ++ P  + 
Sbjct: 668 AEDVPNGAPRDVRIRVHNSTTMTVKWNPPTTKQDGKILGYMVFYTRVDDQGNQLRPPAQ- 726

Query: 556 LPYISDPTTT---SAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            P   D  +       L GL P T Y+I +A YT  GDGA S
Sbjct: 727 -PESKDSMSEENHKVHLTGLAPETTYQIEVAAYTIKGDGARS 767


>gi|213625300|gb|AAI70294.1| Contactin/F3/F11 [Xenopus laevis]
          Length = 1005

 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 197/744 (26%), Positives = 320/744 (43%), Gaps = 101/744 (13%)

Query: 22  TGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS 81
           T  S    R+ P    V  K   AL+++ V L C   G P+P   W K    +  S  IS
Sbjct: 217 TDTSEKPKRYTPVIN-VKFKDTRALKDQNVTLECFALGNPVPVITWRKINEAMPASAEIS 275

Query: 82  QGNYGKSLIIKHVEFSDQGSYTCEVSN--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAE 139
               G  L I +V+  D+G+Y CE  N  G+   ++Y   + V   P +    E IN  E
Sbjct: 276 MS--GAVLKIFNVQPEDEGTYECEAKNIKGLDNHRAY---VYVEGVPEWV---EHINDTE 327

Query: 140 EET---VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
            +    + + C A G P+P I W+ +G P            G   I    L   D G Y 
Sbjct: 328 RDIGSDLHWACVARGKPQPSIRWLKDGAP-----------YGKGDIIKRGLTLEDAGMYQ 376

Query: 197 CNATNSLGYVYKDVYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           C A N  G +Y +  + +LA AP  E T   K      G  V++ C+   APK + +W  
Sbjct: 377 CIAENIHGIIYANAELKILALAPTFEFTPMRKKVLAAKGGRVIIECKPKAAPKAKFSWSK 436

Query: 255 NQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
             + L    R +I + G L+IT++   D G YTCFA N  G A  +G ++V   T IT  
Sbjct: 437 GTELLINNSRVSIWDDGSLEITNITKFDEGSYTCFAENDRGKANSTGIVSVTAATKITLA 496

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP----RFVQSNDYSLTVT 369
           P + +V  G++AT +C+A  DP+L+L+ +W     PI+F+ E     R +++   S  V 
Sbjct: 497 PSNADVTVGENATMQCHASHDPTLELTFIWALNGFPIEFDKEDGHYERAIRNVVGSELVI 556

Query: 370 KSSEL-DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWN---- 424
           K+++L  +G+YTC AQT +D   A A L V+ P   P    + ++ D     ++W+    
Sbjct: 557 KNAQLIHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGVRVEEIRDT-SVKLTWSSGTD 615

Query: 425 ---PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 481
              P+S  +++   +    + W +   E    E     G      V   +P      RV+
Sbjct: 616 NHQPISKYNIQA--QNILSEDWKDVKTENPNIE-----GNMEMARVIDLIPWMDYEFRVI 668

Query: 482 AFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSS--AFYLKW--VKPEQPNGVLMGY 537
           A N    G PS     +  EG    V   E    G S     + W  +  E   G   GY
Sbjct: 669 ATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGSNRELTITWQPLSREYHYGDGFGY 728

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTS--AKLAGLEPSTKYRIHLAGYTKAGDGAESK 595
            + ++   G +   ++     +++P +     K   + P+T++++ +  + K G+G  S 
Sbjct: 729 GVAFKPFNGREWRKVI-----VTNPESGHYVHKDDTITPATQFQVKVKAFNKIGEGPYS- 782

Query: 596 YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDV 655
                                + V+ ++A  ++   AP            T   +N   +
Sbjct: 783 ---------------------STVVVYSA-EDVPTEAP------------TAVVYN---I 805

Query: 656 LDWRQSELVLANQPTFQ-PYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 714
           L    SE+ +A  P ++   E   V+ W  +D E +   + V K    TT ++  +P + 
Sbjct: 806 LS--SSEVSVAWHPVYEKSIEGYQVRYWRIQDKEAAAHRVQV-KASDITTRLEGLMPNTH 862

Query: 715 NFARVLAFNGAYNGPPSEIISFVT 738
               V AFN A +GPPS+ ++F+T
Sbjct: 863 YNIEVRAFNSAGDGPPSKTLTFLT 886



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 152/634 (23%), Positives = 256/634 (40%), Gaps = 84/634 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH-VEFSDQGSYTCEVSNGVGEA 113
           C+  G P P   W KDG P           YGK  IIK  +   D G Y C   N  G  
Sbjct: 338 CVARGKPQPSIRWLKDGAP-----------YGKGDIIKRGLTLEDAGMYQCIAENIHGII 386

Query: 114 KSYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAP 170
            + + +L +LA AP F   P  + + AA+   V  ECK    P+ +  W    + +    
Sbjct: 387 YA-NAELKILALAPTFEFTPMRKKVLAAKGGRVIIECKPKAAPKAKFSWSKGTELLIN-- 443

Query: 171 PNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
            N R  +  +  + I N+ K D G+Y C A N  G       V+V A A +IT AP +  
Sbjct: 444 -NSRVSIWDDGSLEITNITKFDEGSYTCFAENDRGKANSTGIVSVTA-ATKITLAPSNAD 501

Query: 230 TVDGKTVVLTCRVFGAPKPEVN--WIHN----QKELTGGRYTI----LETGDLKITDVAF 279
              G+   + C     P  E+   W  N    + +   G Y      +   +L I +   
Sbjct: 502 VTVGENATMQCHASHDPTLELTFIWALNGFPIEFDKEDGHYERAIRNVVGSELVIKNAQL 561

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
             +G YTC A+  +  +  S  L V+            E+              D S+KL
Sbjct: 562 IHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGVRVEEIR-------------DTSVKL 608

Query: 340 SIVWLRGS---EPID-FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE---- 391
           +  W  G+   +PI  +  + + + S D+    T++  ++      R    + +++    
Sbjct: 609 T--WSSGTDNHQPISKYNIQAQNILSEDWKDVKTENPNIEGNMEMARVIDLIPWMDYEFR 666

Query: 392 --AQATLTVQVP-LEAPSNFT-----LIQVIDA-------KKAVVSWNPVSPQSLRGHFR 436
             A  TL V  P L +P   T     ++   +        ++  ++W P+S +   G   
Sbjct: 667 VIATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGSNRELTITWQPLSREYHYGDGF 726

Query: 437 GYKVQTWTEKDGEGSIRELIVNKGES--TTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
           GY V  +   +G    R++IV   ES     + D   PA++   +V AFN    GP S  
Sbjct: 727 GYGV-AFKPFNGR-EWRKVIVTNPESGHYVHKDDTITPATQFQVKVKAFNKIGEGPYSST 784

Query: 495 ISFVTPEGVPGTVQSLEAIP-LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
           +   + E VP    +      L SS   + W    + +  + GY+++Y  ++  +     
Sbjct: 785 VVVYSAEDVPTEAPTAVVYNILSSSEVSVAWHPVYEKS--IEGYQVRYWRIQDKEAAAHR 842

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDN----VE 609
            ++   SD TT   +L GL P+T Y I +  +  AGDG  SK L ++  K P +    + 
Sbjct: 843 VQVK-ASDITT---RLEGLMPNTHYNIEVRAFNSAGDGPPSKTLTFLTKKAPPSQIPQIT 898

Query: 610 GRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
                 +  +I+W  +  + + +    Y++ +R+
Sbjct: 899 SAVRYGSQYIITWEHVVPLSNESAVNGYKVLYRQ 932



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 141/354 (39%), Gaps = 36/354 (10%)

Query: 72  VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA------- 124
           V ++P +R        +L I  VE  D+G+Y+C VS+       +S  +S+L        
Sbjct: 163 VFLSPDNRRFVTQTNGNLYIAKVEHLDRGNYSCFVSSPSVTKSVFSKFISLLPQTDTSEK 222

Query: 125 ----APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA-PPNPRRKVGP 179
                P   V+ +   A +++ VT EC A G P P I W    + I++A P +    +  
Sbjct: 223 PKRYTPVINVKFKDTRALKDQNVTLECFALGNPVPVITW----RKINEAMPASAEISMSG 278

Query: 180 NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLT 239
             + I N++  D G Y C A N  G      YV V    PE  E   D     G  +   
Sbjct: 279 AVLKIFNVQPEDEGTYECEAKNIKGLDNHRAYVYVEG-VPEWVEHINDTERDIGSDLHWA 337

Query: 240 CRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGS 299
           C   G P+P + W+ +     G  Y     GD+    +   D+G Y C A N  G    +
Sbjct: 338 CVARGKPQPSIRWLKD-----GAPYG---KGDIIKRGLTLEDAGMYQCIAENIHGIIYAN 389

Query: 300 GSLTVKEHT---HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
             L +         T   +      G      C   + P  K S  W +G+E +   S  
Sbjct: 390 AELKILALAPTFEFTPMRKKVLAAKGGRVIIECKPKAAPKAKFS--WSKGTELLINNS-- 445

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTL 410
           R    +D SL +T  ++ D G YTC A+ +      +A  T  V + A +  TL
Sbjct: 446 RVSIWDDGSLEITNITKFDEGSYTCFAEND----RGKANSTGIVSVTAATKITL 495



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 88/370 (23%), Positives = 135/370 (36%), Gaps = 40/370 (10%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           KV + C     P P   W K+ + I+  +       G  +I    ++ D G Y C VSN 
Sbjct: 44  KVSVNCRARANPPPIYKWRKNNLEIDLLNEHYSLVGGNLVINNPDKYKDSGRYVCIVSNI 103

Query: 110 VGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI------HWVHN 162
            G+  S    L+     P+ T E   +   E       C     P P +       W+ N
Sbjct: 104 YGKVWSREATLNFGYLDPFPTEERYEVKVKEGTGAVLICD----PPPHVPDDLNYRWLLN 159

Query: 163 GKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE- 220
             P+  +P N R     N  + I  +   D GNY C  ++    V K V+   ++  P+ 
Sbjct: 160 EFPVFLSPDNRRFVTQTNGNLYIAKVEHLDRGNYSCFVSSP--SVTKSVFSKFISLLPQT 217

Query: 221 -ITEAP-----------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE 268
             +E P           KD   +  + V L C   G P P + W    + +       + 
Sbjct: 218 DTSEKPKRYTPVINVKFKDTRALKDQNVTLECFALGNPVPVITWRKINEAMPASAEISMS 277

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
              LKI +V   D G Y C A+N  G       + V+      +   D E + G    + 
Sbjct: 278 GAVLKIFNVQPEDEGTYECEAKNIKGLDNHRAYVYVEGVPEWVEHINDTERDIGSDLHWA 337

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A   P  + SI WL+   P        + + +     +T     D+G Y C A+    
Sbjct: 338 CVARGKP--QPSIRWLKDGAP--------YGKGDIIKRGLTLE---DAGMYQCIAENIHG 384

Query: 389 FIEAQATLTV 398
            I A A L +
Sbjct: 385 IIYANAELKI 394



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 17/195 (8%)

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
           VP EAP+   +  ++ + +  V+W+PV  +S+ G    Y+V+ W  +D E +   + V K
Sbjct: 793 VPTEAPTA-VVYNILSSSEVSVAWHPVYEKSIEG----YQVRYWRIQDKEAAAHRVQV-K 846

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
               TT ++  +P +     V AFN A +GPPS+ ++F+T +  P  +  + +     S 
Sbjct: 847 ASDITTRLEGLMPNTHYNIEVRAFNSAGDGPPSKTLTFLTKKAPPSQIPQITSAVRYGSQ 906

Query: 520 FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTK 577
           + + W  V P      + GYK+ Y+   G + G L     +       S +L   E    
Sbjct: 907 YIITWEHVVPLSNESAVNGYKVLYRQ-DGQRDGKLYSTRKH-------SVELPVPEEGV- 957

Query: 578 YRIHLAGYTKAGDGA 592
           Y + +  +++ GDGA
Sbjct: 958 YVVEVRAHSEGGDGA 972



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 107/282 (37%), Gaps = 36/282 (12%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   I     +    VG N +   
Sbjct: 31  PIDTIFPE---ESTEGKVSVNCRARANPPPIYKWRKNNLEIDLLNEH-YSLVGGNLVINN 86

Query: 186 NLRKSDTGNYGCNATNSLGYVY-KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFG 244
             +  D+G Y C  +N  G V+ ++  +N     P  TE   +    +G   VL C    
Sbjct: 87  PDKYKDSGRYVCIVSNIYGKVWSREATLNFGYLDPFPTEERYEVKVKEGTGAVLICD--- 143

Query: 245 APKPEV------NWIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCFARN-KL 293
            P P V       W+ N+  +       R+     G+L I  V   D G Y+CF  +  +
Sbjct: 144 -PPPHVPDDLNYRWLLNEFPVFLSPDNRRFVTQTNGNLYIAKVEHLDRGNYSCFVSSPSV 202

Query: 294 GTAQGSGSLTVKEHTHITDQPEDY-----------EVEAGQSATFRCNAVSDPSLKLSIV 342
             +  S  +++   T  +++P+ Y                Q+ T  C A+ +P     I 
Sbjct: 203 TKSVFSKFISLLPQTDTSEKPKRYTPVINVKFKDTRALKDQNVTLECFALGNPV--PVIT 260

Query: 343 WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           W + +E +   +E   +  +   L +      D G Y C A+
Sbjct: 261 WRKINEAMPASAE---ISMSGAVLKIFNVQPEDEGTYECEAK 299


>gi|410989685|ref|XP_004001089.1| PREDICTED: neural cell adhesion molecule L1 [Felis catus]
          Length = 1363

 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 134/476 (28%), Positives = 211/476 (44%), Gaps = 11/476 (2%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L + +V   D G Y 
Sbjct: 348 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLNVVEEDDGEYR 406

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G  + ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 407 CLAENSLGSDR-HTYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 465

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 466 IPVEELAKDQKYRIQRGALILSNMQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 525

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
              + Y  V+G T  L C+ FGAP P V W+  + +  L   R+     G L I D+   
Sbjct: 526 PDNETYMAVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQTN 585

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P+    + G   TF C A  DPSL+ S
Sbjct: 586 DTGHYFCQAANDQNNVTIVANLQVKDATQITQGPQSAIEKKGSKVTFTCQASFDPSLQHS 645

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA-TLTVQ 399
           I W      +    +       D  L +      D G Y+C A TELD +E++A  L V 
Sbjct: 646 ITWRGDGRNLQESGDDDKYFIEDGLLVIHSLDYSDQGNYSCVAGTELDIVESRAELLVVG 705

Query: 400 VPLEAPS-NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVN 458
            P   P    +   ++   +  +SW P   +        Y ++   ++        L   
Sbjct: 706 SPGPVPQLELSDRHLLKQSQVRLSWRPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKV 763

Query: 459 KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTVQSLEAI 513
            G  T+T + K  P      RV A N   +G PS    + VTPE         + +
Sbjct: 764 PGNQTSTTL-KLSPYVHYTFRVTAINKYGSGEPSPASETVVTPEAASAGAHGFDVL 818



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 157/591 (26%), Positives = 240/591 (40%), Gaps = 89/591 (15%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--NLRKSDTGN 194
           A + + +  EC A G P P I W+    P+    P  R     +  T++  N+ + D G 
Sbjct: 349 ALQGQPLVLECIAEGFPTPTIKWLRPSGPM----PADRVTYQNHNKTLQLLNVVEEDDGE 404

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           Y C A NSLG      YV V A AP     P+      G+T  L C+V G P+PEV W  
Sbjct: 405 YRCLAENSLGSDRHTYYVTVEA-APYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRI 463

Query: 255 NQ---KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH-- 309
           N    +EL   +   ++ G L ++++  +D+    C ARN+ G    +  + V +     
Sbjct: 464 NGIPVEELAKDQKYRIQRGALILSNMQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKI 523

Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
           +T   E Y    G +A   C A   P    S+ WL        + E RF    + +L + 
Sbjct: 524 LTPDNETYMAVEGSTAYLLCKAFGAPVP--SVQWLDKEGKTVLQDE-RFFPYTNGTLGIR 580

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQ 429
                D+G Y C+A  + + +   A L               QV DA +         PQ
Sbjct: 581 DLQTNDTGHYFCQAANDQNNVTIVANL---------------QVKDATQITQG-----PQ 620

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGE----STTTEVDK-FVPASKNFARVLAFN 484
           S     +G KV    +   + S++  I  +G+      + + DK F+         L ++
Sbjct: 621 SAI-EKKGSKVTFTCQASFDPSLQHSITWRGDGRNLQESGDDDKYFIEDGLLVIHSLDYS 679

Query: 485 --GAYNGPPSEIISFVTPE------GVPGTVQSLEAIP---LGSSAFYLKWVKPEQPNGV 533
             G Y+      +  V         G PG V  LE      L  S   L W   E  N  
Sbjct: 680 DQGNYSCVAGTELDIVESRAELLVVGSPGPVPQLELSDRHLLKQSQVRLSWRPAEDHNAP 739

Query: 534 LMGYKIKYQSVKGTKVGP----LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           +  Y I+++     ++ P     L ++P   + T+T+ KL+   P   Y   +    K G
Sbjct: 740 IEKYDIEFED---KEMAPEKWYSLGKVP--GNQTSTTLKLS---PYVHYTFRVTAINKYG 791

Query: 590 DGAES----------------------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPE 627
            G  S                       + F  P KNP +V+G G+  +N+VI+W  +  
Sbjct: 792 SGEPSPASETVVTPEAASAGAHGFDVLTHYFPAPEKNPVDVKGEGNETSNMVITWKPLRW 851

Query: 628 IEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           ++ NAP  +YR+ WR   T  AW +  V D     LV++N  TF PYEIKV
Sbjct: 852 MDWNAPQVQYRVQWRPQGTRGAWQEQIVSD---PFLVVSNTSTFVPYEIKV 899



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 153/601 (25%), Positives = 233/601 (38%), Gaps = 72/601 (11%)

Query: 44   VALRNKKVELFCIFGGTPLPQTIW-SKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
            +A+      L C   G P+P   W  K+G  +   +R      G +L I+ ++ +D G Y
Sbjct: 532  MAVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNG-TLGIRDLQTNDTGHY 590

Query: 103  TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP--EPEIHWV 160
             C+ +N      +   +L V  A   T  P+     +   VTF C+AS  P  +  I W 
Sbjct: 591  FCQAANDQNNV-TIVANLQVKDATQITQGPQSAIEKKGSKVTFTCQASFDPSLQHSITWR 649

Query: 161  HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
             +G+ + ++  + +  +    + I +L  SD GNY C A   L  V     + V+     
Sbjct: 650  GDGRNLQESGDDDKYFIEDGLLVIHSLDYSDQGNYSCVAGTELDIVESRAELLVVGSPGP 709

Query: 221  ITEAP-KDEYTVDGKTVVLTCRV---FGAPKPEVNWIHNQKELTGGRYTILET--GDLKI 274
            + +    D + +    V L+ R      AP  + +     KE+   ++  L    G+   
Sbjct: 710  VPQLELSDRHLLKQSQVRLSWRPAEDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTS 769

Query: 275  TDVAFADSGEYT--CFARNKLGT--------------AQGSGSLTVKEHTHITDQPEDYE 318
            T +  +    YT    A NK G+              A  +G+      TH    PE   
Sbjct: 770  TTLKLSPYVHYTFRVTAINKYGSGEPSPASETVVTPEAASAGAHGFDVLTHYFPAPEKNP 829

Query: 319  VEAGQSATFRCNAV-----------SDPSLKLSIVW----LRGSEPIDFESEPRFVQSND 363
            V+         N V           + P ++  + W     RG+      S+P  V SN 
Sbjct: 830  VDVKGEGNETSNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGAWQEQIVSDPFLVVSNT 889

Query: 364  -----YSLTVTKSSELDSG---QYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVID 415
                 Y + V   +    G   Q T     E D+ EA   L              I++++
Sbjct: 890  STFVPYEIKVQAVNSQGKGPEPQITIGYSGE-DYPEASPELEG------------IKILN 936

Query: 416  AKKAVVSWNPVSPQSLRGHFRGYKVQTWTE-KDGEGSIREL----IVNKGESTTTEVDKF 470
            +   +V W PV P  ++GH RGY V  W E    + S R +    +V    +T+  +   
Sbjct: 937  SSAVLVRWWPVDPAQVKGHLRGYNVTYWWEGSQRKHSKRHVHKGHVVVPANTTSAVLGGL 996

Query: 471  VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
             P S     V AFNG   GP SE+ +F TPEGVPG  ++L       ++  L W  P   
Sbjct: 997  RPYSSYHLEVQAFNGRGLGPASEM-TFSTPEGVPGHPEALHVECQSDTSLLLHWQPPLSH 1055

Query: 531  NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGD 590
            NGVL GY + Y  +       L   LP   DP      L  L P  +YR  L   TK G 
Sbjct: 1056 NGVLTGYVLSYHPLDDGDKEQLSFDLP---DPELRMHNLTNLSPHLRYRFQLQATTKEGP 1112

Query: 591  G 591
            G
Sbjct: 1113 G 1113



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 99/403 (24%), Positives = 169/403 (41%), Gaps = 36/403 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLII--KHV 94
           ++ V      + L C   G P  Q  W++DGV   P +     + Q  +  S  I   + 
Sbjct: 138 RRLVVFPTDDISLKCEASGRPEVQFRWTRDGVHFKPKEEAGVTVHQAPHSGSFTIAGNNS 197

Query: 95  EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
            F+   QG+Y C  SN +G A S+ I L    AP +   TV+P  +   E E+V   C  
Sbjct: 198 NFAQRFQGTYRCFASNKLGTAMSHEIQLMAEGAPKWPKETVKP--VEVEEGESVILPCHP 255

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+ N K I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 256 PPSAEPLRIYWM-NSK-ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 313

Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+ 
Sbjct: 314 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 373

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++ +V   D GEY C A N LG+ + +  +TV+   +   +
Sbjct: 374 PSGPMPADRVTYQNHNKTLQLLNVVEEDDGEYRCLAENSLGSDRHTYYVTVEAAPYWLHK 433

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++  ++ +  +    +L ++    
Sbjct: 434 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELAKDQKYRIQRGALILSNMQP 491

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVPLE--APSNFTLIQV 413
            D+    C A+     + A A +  VQ+P +   P N T + V
Sbjct: 492 SDTMVTQCEARNRHGLLLANAYIYVVQLPAKILTPDNETYMAV 534



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 113/285 (39%), Gaps = 19/285 (6%)

Query: 420  VVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR 479
            V++W P+           Y+VQ W  +   G+ +E IV+      +    FVP      +
Sbjct: 843  VITWKPLRWMDWNAPQVQYRVQ-WRPQGTRGAWQEQIVSDPFLVVSNTSTFVPYE---IK 898

Query: 480  VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMG 536
            V A N    GP  +I    + E  P     LE I  L SSA  ++W  V P Q  G L G
Sbjct: 899  VQAVNSQGKGPEPQITIGYSGEDYPEASPELEGIKILNSSAVLVRWWPVDPAQVKGHLRG 958

Query: 537  YKIKY--QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y + Y  +  +       + +   +    TTSA L GL P + Y + +  +   G G  S
Sbjct: 959  YNVTYWWEGSQRKHSKRHVHKGHVVVPANTTSAVLGGLRPYSSYHLEVQAFNGRGLGPAS 1018

Query: 595  KYLFYVPFKNPDNVEG---RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWN 651
            +  F  P   P + E       +  +L++ W   P + HN     Y + +   + G+   
Sbjct: 1019 EMTFSTPEGVPGHPEALHVECQSDTSLLLHW--QPPLSHNGVLTGYVLSYHPLDDGD--K 1074

Query: 652  QDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
            +    D    EL + N     P   Y  ++  T  E  GE  +RE
Sbjct: 1075 EQLSFDLPDPELRMHNLTNLSPHLRYRFQLQATTKEGPGEAIVRE 1119


>gi|345786348|ref|XP_533761.3| PREDICTED: contactin-3 [Canis lupus familiaris]
          Length = 1015

 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 172/631 (27%), Positives = 271/631 (42%), Gaps = 49/631 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P   S +I    +   L I + +  D GSY 
Sbjct: 227 AAKGATVKLECFALGNPVPQINWRRSDGLPF--SSKIKLRKFNGVLEIPNFQQEDTGSYE 284

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G   +    L+  A P++    + +  A E+ + +EC+ASG P+P   W+ NG
Sbjct: 285 CIAENSRGRNVARG-RLTYYAKPHWVQLIKDVEIAVEDNLFWECRASGKPKPSYRWLKNG 343

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + +       R ++    +TI NL  +D+G + C A N  G +Y    + V+A AP+ ++
Sbjct: 344 EALVL---EERIQIENGALTISNLNVTDSGMFQCIAENKHGLIYSSAELKVVASAPDFSK 400

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
           AP  +      G  V L C+   +PKP  +W      +    R + L+ G LKI +V  A
Sbjct: 401 APMKKLMQVQVGSMVSLDCKPRASPKPVCSWKKGDMIVQENERISFLKDGGLKIANVTKA 460

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L + 
Sbjct: 461 DAGTYTCIAENQFGKANGTTRLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDIM 520

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 521 FTWYFNGALTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADL 580

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
            V+     P N  + ++ D   A +SW       +PV   S++       G++  T    
Sbjct: 581 IVRGSPGPPENVKVDEITDT-TAQLSWKEGTDNHSPVISYSVQARTPFSVGWQTAT---- 635

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 636 ----TVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 689

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S  +   GS S   + W  V  E  NG   GY + ++ +  T     ++ +    D 
Sbjct: 690 VPPSEVSGGGGSRSELVITWDPVPEELQNGGGFGYVVAFRPLGVTN---WIQTVVTSPDT 746

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y + +  Y   G+G  S    +F     P   P  V     + + 
Sbjct: 747 PRYVFRNESIMPFSLYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTIAPSRVSANSLSSSE 806

Query: 618 LVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
           + +SW  +P    N     Y +  R  N GE
Sbjct: 807 IEVSWNTIPWKLSNGHLLGYEV--RYWNNGE 835



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 157/618 (25%), Positives = 241/618 (38%), Gaps = 48/618 (7%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V +A+       ++           P   V+ PE + AA
Sbjct: 169 LYIAKVEPSDVGNYTCVVTSTVTKARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 228

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P S       RK     + I N ++ DTG+Y C
Sbjct: 229 KGATVKLECFALGNPVPQINWRRSDGLPFSSKI--KLRKFN-GVLEIPNFQQEDTGSYEC 285

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   ++V    L +   P   +  KD        +   CR  G PKP   W+ N
Sbjct: 286 IAENSRG---RNVARGRLTYYAKPHWVQLIKDVEIAVEDNLFWECRASGKPKPSYRWLKN 342

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
            + L       +E G L I+++   DSG + C A NK G    S  L  V      +  P
Sbjct: 343 GEALVLEERIQIENGALTISNLNVTDSGMFQCIAENKHGLIYSSAELKVVASAPDFSKAP 402

Query: 315 ED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
                +V+ G   +  C   + P    S  W +G   +       F++  D  L +   +
Sbjct: 403 MKKLMQVQVGSMVSLDCKPRASPKPVCS--WKKGDMIVQENERISFLK--DGGLKIANVT 458

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQ 429
           + D+G YTC A+ +         L V  P     APSN   + V   +  ++        
Sbjct: 459 KADAGTYTCIAENQFGKANGTTRLVVTEPTRITLAPSN---MDVSVGESVILPCQVQHDP 515

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
            L   F  Y     T+   +GS  E +   G S+   + + +    +   V       + 
Sbjct: 516 LLDIMFTWYFNGALTDFKKDGSHFEKV--GGSSSGDLMIRNIQLKHSGKYVCMVQTGVDS 573

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
             S     V   G PG  ++++   +  +   L W +    +  ++ Y +  Q+     V
Sbjct: 574 VSSAADLIV--RGSPGPPENVKVDEITDTTAQLSWKEGTDNHSPVISYSV--QARTPFSV 629

Query: 550 G-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPF 602
           G      +P + D  T +A +  L P  +Y   +    K G G  S      +    VP 
Sbjct: 630 GWQTATTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 689

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
             P  V G G + + LVI+W  +PE   N   F Y + +R       W Q  V       
Sbjct: 690 VPPSEVSGGGGSRSELVITWDPVPEELQNGGGFGYVVAFRPLGVTN-WIQTVVTSPDTPR 748

Query: 663 LVLANQPT--FQPYEIKV 678
            V  N+    F  YE+KV
Sbjct: 749 YVFRNESIMPFSLYEVKV 766



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 149/374 (39%), Gaps = 28/374 (7%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS-DQGSY 102
           V   +KK+ L C   G P P   W  +G  IN S        G +L++ +   + D G+Y
Sbjct: 27  VGSEDKKITLNCEARGNPSPHYRWQLNGSDINLSMEYRYKLDGGNLVVINPNRNWDTGNY 86

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEI 157
            C  +N +G   S    L       F T     ++  E + V   C   G P    E   
Sbjct: 87  QCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLC---GPPPHSGELSY 143

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDVYVN 213
            W+ N  P S    + RR V      + I  +  SD GNY C  T+++    V       
Sbjct: 144 AWIFNEYP-SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTKARVLGSPTPL 202

Query: 214 VL-------AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           VL        + P+I  + P+      G TV L C   G P P++NW  +       +  
Sbjct: 203 VLRSDGVMGEYEPKIEVQFPETLPAAKGATVKLECFALGNPVPQINWRRSDGLPFSSKIK 262

Query: 266 ILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
           + +  G L+I +    D+G Y C A N  G     G LT     H     +D E+    +
Sbjct: 263 LRKFNGVLEIPNFQQEDTGSYECIAENSRGRNVARGRLTYYAKPHWVQLIKDVEIAVEDN 322

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             + C A   P  K S  WL+  E +  E     +Q  + +LT++  +  DSG + C A+
Sbjct: 323 LFWECRASGKP--KPSYRWLKNGEALVLEER---IQIENGALTISNLNVTDSGMFQCIAE 377

Query: 385 TELDFIEAQATLTV 398
            +   I + A L V
Sbjct: 378 NKHGLIYSSAELKV 391



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 125/300 (41%), Gaps = 32/300 (10%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +E++ +T  C+A G P P   W  NG  I+ +     +  G
Sbjct: 10  LLQGPVFIREPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDINLSMEYRYKLDG 69

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N + I   R  DTGNY C ATNSLG +         A+        +   +V +G+ VV
Sbjct: 70  GNLVVINPNRNWDTGNYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVV 129

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        WI N+     E    R+   ETG L I  V  +D G YTC 
Sbjct: 130 LLC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCV 185

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
             + +  A+  GS   L ++    + +         PE      G +    C A+ +P  
Sbjct: 186 VTSTVTKARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGATVKLECFALGNPVP 245

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +++  W R S+ + F S+ +  + N   L +    + D+G Y C A+       A+  LT
Sbjct: 246 QIN--WRR-SDGLPFSSKIKLRKFNGV-LEIPNFQQEDTGSYECIAENSRGRNVARGRLT 301



 Score = 46.2 bits (108), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 88/216 (40%), Gaps = 17/216 (7%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P  APS  +    + + +  VSWN +  +   GH  GY+V+ W   + E S +  +   G
Sbjct: 790 PTIAPSRVSA-NSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNNGEEESSSKVKVA--G 846

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
             T+  +         +  V A+N A  GP S  ++  T +  P             +  
Sbjct: 847 NETSARLRGLKSNLAYYTAVRAYNSAGAGPFSTTVNATTKKTPPSQPPGNVVWNATDTKV 906

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            L W  VK ++    + GYK+ Y++     V  L        +   TSA+L  L     Y
Sbjct: 907 LLNWEQVKAKENESEVTGYKVFYRTSSQNNVQVL--------NTNKTSAELL-LPIKEDY 957

Query: 579 RIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGST 614
            I +   T  GDG  S+ +  +P     N++ RGST
Sbjct: 958 IIEVKATTDGGDGTSSEQI-RIP--RITNMDARGST 990


>gi|395733521|ref|XP_002813554.2| PREDICTED: LOW QUALITY PROTEIN: contactin-4 isoform 2 [Pongo
           abelii]
          Length = 1026

 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 192/726 (26%), Positives = 296/726 (40%), Gaps = 111/726 (15%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P  IW + DG PI    R  + N    L I + +  D G Y C   N 
Sbjct: 244 VKLECFALGNPVPTIIWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGLYECVAENS 301

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P +  +   I+ A EE V +ECKA+G P+P   W+ NG+P+   
Sbjct: 302 RGKNVARG-QLTFYAQPNWIQKINDIHVAMEENVFWECKANGRPKPTYRWLKNGEPLLT- 359

Query: 170 PPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
               R ++    G   ITI NL  SD G Y C A N  G ++ +  +NV+A  P+ +   
Sbjct: 360 ----RDRIQIEQGTLNITIVNL--SDAGMYQCLAENKHGVIFSNAELNVIAVGPDFSRTL 413

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADS 282
               T+   G  VV+ C+   +PKP   W   +  L    R TI E G+L+I +V  +D+
Sbjct: 414 LKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDA 473

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   
Sbjct: 474 GSYTCIASNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFT 533

Query: 343 WLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           W      IDF+ +     R    +   L +       +G+Y C  QT +D + A A L V
Sbjct: 534 WSFNGHLIDFDRDGDHFERVGGDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIV 593

Query: 399 QVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGEG 450
           + P   P   T+ ++ D   A +SW P     SP ++      Y +Q  T          
Sbjct: 594 RGPPGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFSVGWQAVS 646

Query: 451 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTPE 501
           ++ ELI   G++ T  V    P  +   R +A N    G PS         E +  VTP 
Sbjct: 647 TVPELI--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPA 704

Query: 502 GVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
            V G   S        S   + W  V  E  NG   GY + ++       G ++  L  +
Sbjct: 705 NVSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFRP-----YGKMIWMLTVL 752

Query: 560 --SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRG 612
             +D +    +   + P + + + +  +   G+G  S           P K P ++  R 
Sbjct: 753 ASADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARS 812

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
            +  ++ + W +  E                                       N+   Q
Sbjct: 813 LSATDIEVFWASPLE--------------------------------------KNRGRIQ 834

Query: 673 PYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 732
            YE+K    W  +D E + R+ I   G  T+T++     ++     V A+N A  GP S 
Sbjct: 835 GYEVKY---WRHEDKEENARK-IRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPSSA 890

Query: 733 IISFVT 738
            ++  T
Sbjct: 891 TVNVTT 896



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 162/637 (25%), Positives = 240/637 (37%), Gaps = 84/637 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V+ PE +  
Sbjct: 179 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPT 238

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   +GKPI++     RR      + I N ++ D G Y 
Sbjct: 239 AKGATVKLECFALGNPVPTIIWRRADGKPIAR---KARRHKSNGILEIPNFQQEDAGLYE 295

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P   +   D +    + V   C+  G PKP   W+ N 
Sbjct: 296 CVAENSRGKNVARGQLTFYAQ-PNWIQKINDIHVAMEENVFWECKANGRPKPTYRWLKNG 354

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           + L       +E G L IT V  +D+G Y C A NK G    +  L V     I   P+ 
Sbjct: 355 EPLLTRDRIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELNV-----IAVGPDF 409

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  K    W +G + I  E+E R   S D +L +
Sbjct: 410 SRTLLKRVTLVKVGGEVVIECKPKASP--KPVYTWKKGRD-ILKENE-RITISEDGNLRI 465

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV------- 421
              ++ D+G YTC A        +   L V+ P       + + V   +  V+       
Sbjct: 466 INVTKSDAGSYTCIASNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHD 525

Query: 422 -SWNPVSPQSLRGHFRGY-KVQTWTEKDGEGSIRELIVNKGE---------STTTEVDKF 470
            S + V   S  GH   + +     E+ G  S  +L++   +            T VD+ 
Sbjct: 526 HSLDIVFTWSFNGHLIDFDRDGDHFERVGGDSAGDLMIRNIQLKHAGKYVCMVQTSVDRL 585

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPEQ 529
             A+    R         GPP    +    E    T Q S    P   S   +  ++   
Sbjct: 586 SAAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQART 636

Query: 530 PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           P      + + +Q+V           +P + D  T +A + GL P  +Y          G
Sbjct: 637 P------FSVGWQAV---------STVPELIDGKTFTATVVGLNPWVEYEFRTVAANVIG 681

Query: 590 DGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  S      +    +P   P NV G G + + LVI+W  +PE   N   F Y + +R 
Sbjct: 682 IGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRP 741

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
           +     W    +     S  V  N+    F P+E+KV
Sbjct: 742 YGK-MIWMLTVLASADASRYVFRNESVRPFSPFEVKV 777



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 108/281 (38%), Gaps = 31/281 (11%)

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS-DTGNYG 196
           +EE+ V   C+   + +P I W  NG  +     + R  V    + I N  K+ D G Y 
Sbjct: 42  SEEKKVKLNCEVKEIQKPHIRWKLNGTDVDTGM-DFRYSVVEGSLLINNPNKTQDAGTYQ 100

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVN---- 251
           C ATNS G +         A+        +   +V  G+ +VL C     P P       
Sbjct: 101 CTATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMVLLC----GPPPHSGELSY 156

Query: 252 -WIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYTCFARNK------LG-----TAQ 297
            WI N+        R+   ETG+L I  V  +D G YTC   N       LG       +
Sbjct: 157 AWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILR 216

Query: 298 GSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS-EPIDFESEP 356
             G +   E       PE      G +    C A+ +P    +I+W R   +PI    + 
Sbjct: 217 NDGVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNPV--PTIIWRRADGKPI--ARKA 272

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           R  +SN   L +    + D+G Y C A+       A+  LT
Sbjct: 273 RRHKSNGI-LEIPNFQQEDAGLYECVAENSRGKNVARGQLT 312



 Score = 42.7 bits (99), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 21/192 (10%)

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            RG  +GY+V+ W  +D E + R+ I   G  T+T++     ++     V A+N A  GP 
Sbjct: 830  RGRIQGYEVKYWRHEDKEENARK-IRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPS 888

Query: 492  SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
            S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 889  SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNR 944

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
             +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P  + 
Sbjct: 945  QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIPKISN 994

Query: 606  DNVEGRGSTPNN 617
                G G++ +N
Sbjct: 995  AYARGSGASTSN 1006


>gi|296471083|tpg|DAA13198.1| TPA: L1 cell adhesion molecule isoform 3 [Bos taurus]
          Length = 1248

 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 138/474 (29%), Positives = 216/474 (45%), Gaps = 25/474 (5%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L + +V   D G Y 
Sbjct: 248 VALQGQPLILECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLNVGEEDDGEYR 306

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G  + ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 307 CLAENSLGSDR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 365

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + NL+ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 366 IPVEELGKDQKYRIHHGALVLSNLQPSDTMVTQCEARNRHGLLLANAYIYVVELPAKILT 425

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
              + Y  V G T  L C+ FGAP P V W+  + +  L   R+     G L I D+   
Sbjct: 426 PDNETYMAVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNGTLGIRDLQTN 485

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T I   P     + G    F C A  DPSL+ S
Sbjct: 486 DTGHYFCQAANDQSNVTIVANLQVKDATRIMQGPRSAIEKRGSRVMFTCQASFDPSLQHS 545

Query: 341 IVWLRGSEPIDFE----SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W R  + +D +    S+  F++  D  L +      D G Y+C A T+LD +E++A L
Sbjct: 546 TTWRR--DALDLQELGDSDKYFIE--DERLVIHSLDYSDQGNYSCVASTKLDVVESRAEL 601

Query: 397 TV-----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGS 451
            V      VP    S+  L++     +  +SW+P    +       Y ++   ++     
Sbjct: 602 LVVGSPGPVPQLELSDHHLLK---QSQVRLSWSPADDHN--APIEKYDIEFEDKEMAPEK 656

Query: 452 IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVP 504
              L    G  T+T + K  P      RV A N    G PS +  + VTPE  P
Sbjct: 657 WYSLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPDSETVVTPEAAP 709



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 152/572 (26%), Positives = 239/572 (41%), Gaps = 67/572 (11%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--NLRKSDTGN 194
           A + + +  EC A G P P I W+    P+    P  R     +  T++  N+ + D G 
Sbjct: 249 ALQGQPLILECIAEGFPTPTIKWLRPSGPM----PADRVTYQNHNKTLQLLNVGEEDDGE 304

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           Y C A NSLG      YV V A AP     P+      G+T  L C+V G P+PEV W  
Sbjct: 305 YRCLAENSLGSDRHAYYVTVEA-APYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRI 363

Query: 255 NQ---KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH-- 309
           N    +EL   +   +  G L ++++  +D+    C ARN+ G    +  + V E     
Sbjct: 364 NGIPVEELGKDQKYRIHHGALVLSNLQPSDTMVTQCEARNRHGLLLANAYIYVVELPAKI 423

Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
           +T   E Y    G +A   C A   P    S+ WL        + E RF    + +L + 
Sbjct: 424 LTPDNETYMAVQGSTAYLLCKAFGAPVP--SVQWLDREGKTVLQDE-RFFPYTNGTLGIR 480

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ----VIDAKKAVVSWNP 425
                D+G Y C+A  +      Q+ +T+   L+      ++Q     I+ + + V +  
Sbjct: 481 DLQTNDTGHYFCQAAND------QSNVTIVANLQVKDATRIMQGPRSAIEKRGSRVMF-- 532

Query: 426 VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNG 485
               + +  F      + T +     ++EL     +    E ++ V  S +++      G
Sbjct: 533 ----TCQASFDPSLQHSTTWRRDALDLQEL--GDSDKYFIEDERLVIHSLDYSD----QG 582

Query: 486 AYNGPPSEIISFVTPE------GVPGTVQSLEAIP---LGSSAFYLKWVKPEQPNGVLMG 536
            Y+   S  +  V         G PG V  LE      L  S   L W   +  N  +  
Sbjct: 583 NYSCVASTKLDVVESRAELLVVGSPGPVPQLELSDHHLLKQSQVRLSWSPADDHNAPIEK 642

Query: 537 YKIKYQSVKGTKVGP----LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 592
           Y I+++     ++ P     L ++P   + T+T+ KL+   P   Y   +    K G G 
Sbjct: 643 YDIEFED---KEMAPEKWYSLGKVP--GNQTSTTLKLS---PYVHYTFRVTAINKYGPGE 694

Query: 593 ESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
            S     V      P KNP +V+G G+  NN+VI+W  +  ++ NAP  +YR+ WR    
Sbjct: 695 PSPDSETVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRWMDWNAPQVQYRVQWRPQKM 754

Query: 647 GEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
             AW +  V D     LV++N  TF PYEIKV
Sbjct: 755 QGAWQEQIVSD---PFLVVSNTSTFVPYEIKV 783



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 146/591 (24%), Positives = 234/591 (39%), Gaps = 68/591 (11%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIW-SKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           +A++     L C   G P+P   W  ++G  +   +R      G +L I+ ++ +D G Y
Sbjct: 432 MAVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNG-TLGIRDLQTNDTGHY 490

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP--EPEIHWV 160
            C+ +N      +   +L V  A      P          V F C+AS  P  +    W 
Sbjct: 491 FCQAANDQSNV-TIVANLQVKDATRIMQGPRSAIEKRGSRVMFTCQASFDPSLQHSTTWR 549

Query: 161 HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
            +   + +   + +  +   R+ I +L  SD GNY C A+  L  V     + V+     
Sbjct: 550 RDALDLQELGDSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDVVESRAELLVVGSPGP 609

Query: 221 ITEAP-KDEYTVDGKTVVLT---CRVFGAPKPEVNWIHNQKELTGGRYTILET--GDLKI 274
           + +    D + +    V L+        AP  + +     KE+   ++  L    G+   
Sbjct: 610 VPQLELSDHHLLKQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTS 669

Query: 275 TDVAFADSGEYT--CFARNKLGTAQGS--GSLTVKEHTHITDQPEDYEVEAGQSAT---- 326
           T +  +    YT    A NK G  + S      V         P D + E  ++      
Sbjct: 670 TTLKLSPYVHYTFRVTAINKYGPGEPSPDSETVVTPEAAPEKNPVDVKGEGNETNNMVIT 729

Query: 327 ---FRCNAVSDPSLKLSIVW----LRGSEPIDFESEPRFVQSNDYSL--------TVTKS 371
               R    + P ++  + W    ++G+      S+P  V SN  +         TV   
Sbjct: 730 WKPLRWMDWNAPQVQYRVQWRPQKMQGAWQEQIVSDPFLVVSNTSTFVPYEIKVQTVNSQ 789

Query: 372 SELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
            +    Q T     E D+ +A        PL  P     ++ +++   +V W  V P  +
Sbjct: 790 GKGPEPQITIGYSGE-DYPQAS-------PLLEP-----VKALNSSTVLVRWQSVDPAQV 836

Query: 432 RGHFRGYKVQTWTEKDGEGSIRE---LIVNKGE------STTTEVDKFVPASKNFARVLA 482
           +GH RGY V  W     EGS R+     V+KG       +T+T +    P S  +  V A
Sbjct: 837 KGHLRGYNVTYW----WEGSQRKHNKRHVHKGHVVVPANATSTILGGLRPYSSYWVEVQA 892

Query: 483 FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
           FNG   GP S + +F TPEGVPG  ++L       ++  L W  P   NGVL GY + YQ
Sbjct: 893 FNGRGLGPASGM-TFNTPEGVPGHPEALHLECQSDTSLLLHWQPPLSHNGVLTGYVLSYQ 951

Query: 543 SVK-GTKVGPLLERLPY-ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            +  G+K     E+L + + DP   +  L  L P  +YR  L   T+ G G
Sbjct: 952 PLNDGSK-----EQLSFDLPDPELRTHNLTNLSPRLRYRFQLQATTREGPG 997



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 92/403 (22%), Positives = 168/403 (41%), Gaps = 36/403 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQ--------GNYGKSLIIK 92
           ++ V      V L C   G P  Q  W++DG+   P + +          G++  +    
Sbjct: 38  RRVVVFPTDDVSLKCEASGKPEVQFRWTRDGILFKPREELGMIVNQVPHSGSFSITGNSS 97

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
           +   S QG+Y C  SN +G A S+ I L     P +   TV+P  +   E E+V   C  
Sbjct: 98  NFAQSFQGTYRCFASNKLGTAMSHEIQLMAEGTPKWPKETVKP--VEVEEGESVILPCHP 155

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 156 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 213

Query: 205 YVYK---DVYV----NVLAHAPEI---TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K   D+ V    +++   P +   T +      + G+ ++L C   G P P + W+ 
Sbjct: 214 IIQKEPIDLRVKATNSMMDRKPHLLFPTNSSSHLVALQGQPLILECIAEGFPTPTIKWLR 273

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++ +V   D GEY C A N LG+ + +  +TV+   +   +
Sbjct: 274 PSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSDRHAYYVTVEAAPYWLHK 333

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++   + +  + +  +L ++    
Sbjct: 334 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELGKDQKYRIHHGALVLSNLQP 391

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP--LEAPSNFTLIQV 413
            D+    C A+     + A A +  V++P  +  P N T + V
Sbjct: 392 SDTMVTQCEARNRHGLLLANAYIYVVELPAKILTPDNETYMAV 434


>gi|431918209|gb|ELK17437.1| Protein sidekick-1 [Pteropus alecto]
          Length = 1357

 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 161/537 (29%), Positives = 229/537 (42%), Gaps = 40/537 (7%)

Query: 126 PYFTVEPEFINAAE-EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-IT 183
           PYFT EP     AE EETV   C A G P P + W  +  PI      PR +V P   + 
Sbjct: 38  PYFTAEPASRIVAEVEETVDIVCHAMGAPPPTLRWYKDAVPIGTLQ-GPRYRVLPGGGLR 96

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVF 243
           I+ LR  D+G + C A+N  G +    Y+ V   AP  T  P D    +G T VL C V 
Sbjct: 97  IQQLRPDDSGIFQCFASNDGGEIQTHTYLAVTNVAPAFTRLPVDTTVTNGTTAVLRCGVS 156

Query: 244 GAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
           GAPKP + W      L  G     R+ +LE+G L+I+ V+  D+G+YTC+A N  G    
Sbjct: 157 GAPKPAITWRRGNHVLASGSVRIPRFMLLESGGLQISPVSVQDAGDYTCYATNAEGALNA 216

Query: 299 SGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF 358
           S +LTV   T I   PED  V  G +AT  C A  DP + +  VW + +  +   S  R 
Sbjct: 217 SATLTVWNRTSIVTPPEDRVVIKGTTATLPCGATHDPRVSVRYVWKKDNAILTPSSSSRA 276

Query: 359 VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKK 418
           V   D SL ++++   D G YTC   +E       A L V + L  P    L ++   + 
Sbjct: 277 VVEKDGSLLISQTWSGDIGDYTCEVLSEGGNDSRAARLEV-IELPHPPQNLLARLSPPRS 335

Query: 419 --AVVSW-NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG-ESTTTEVDKFVPAS 474
             A +SW  P    S   H+    V   +E +    +   + N G E T   V    PA 
Sbjct: 336 HAATLSWVRPFDGNSPVLHY----VVELSENNSPWKVH--LPNVGPEKTGVTVRGLTPAR 389

Query: 475 KNFARVLAFN----GAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
               RV A N    G Y+   S ++    P   P   +++ A    + +  ++W  P + 
Sbjct: 390 TYQFRVCAVNQVGKGQYSAETSRLMLPEEPPSAPP--KNIVASGRTNQSIMVQWQPPPET 447

Query: 531 --NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
             NG L GY++           P   +   I+ P      +  L   T+Y I +A Y  A
Sbjct: 448 EHNGALHGYRLAGL--------PGEHQQRNITSPEVNYCLVTELIIWTQYEIQVAAYNGA 499

Query: 589 GDGAESKY-----LFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
           G G  S+      L  VP   P NV+        +   W   P+   N  +  Y++ 
Sbjct: 500 GLGVFSRAVTEYTLQGVPTAPPQNVQAEAVNSTAIRFLWNPPPQQFINGINQGYKLL 556



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 125/528 (23%), Positives = 191/528 (36%), Gaps = 53/528 (10%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPIN----PSDRISQGNYGKSLIIKHVEFSDQ 99
           VA   + V++ C   G P P   W KD VPI     P  R+  G     L I+ +   D 
Sbjct: 49  VAEVEETVDIVCHAMGAPPPTLRWYKDAVPIGTLQGPRYRVLPGG---GLRIQQLRPDDS 105

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHW 159
           G + C  SN  GE ++++       AP FT  P         T    C  SG P+P I W
Sbjct: 106 GIFQCFASNDGGEIQTHTYLAVTNVAPAFTRLPVDTTVTNGTTAVLRCGVSGAPKPAITW 165

Query: 160 VHNGKPISQAPPN-PR-RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAH 217
                 ++      PR   +    + I  +   D G+Y C ATN+ G +     + V   
Sbjct: 166 RRGNHVLASGSVRIPRFMLLESGGLQISPVSVQDAGDYTCYATNAEGALNASATLTVWNR 225

Query: 218 APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVN--WIHNQKELT---GGRYTILETGDL 272
              I   P+D   + G T  L C     P+  V   W  +   LT     R  + + G L
Sbjct: 226 T-SIVTPPEDRVVIKGTTATLPCGATHDPRVSVRYVWKKDNAILTPSSSSRAVVEKDGSL 284

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ-------PEDYEVEAGQSA 325
            I+     D G+YTC   ++ G    +  L V E  H           P  +        
Sbjct: 285 LISQTWSGDIGDYTCEVLSEGGNDSRAARLEVIELPHPPQNLLARLSPPRSHAATLSWVR 344

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFE-----------SEPRFVQSNDYSLTVTKSSEL 374
            F  N+   P L   +     + P               +      +  Y   V   +++
Sbjct: 345 PFDGNS---PVLHYVVELSENNSPWKVHLPNVGPEKTGVTVRGLTPARTYQFRVCAVNQV 401

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
             GQY+          E    +  + P  AP    +      +  +V W P       G 
Sbjct: 402 GKGQYSA---------ETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGA 452

Query: 435 FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
             GY++       GE   R   +   E     V + +  ++   +V A+NGA  G  S  
Sbjct: 453 LHGYRLAGL---PGEHQQRN--ITSPEVNYCLVTELIIWTQYEIQVAAYNGAGLGVFSRA 507

Query: 495 ISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKI 539
           ++  T +GVP    Q+++A  + S+A    W  P Q   NG+  GYK+
Sbjct: 508 VTEYTLQGVPTAPPQNVQAEAVNSTAIRFLWNPPPQQFINGINQGYKL 555



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 91/242 (37%), Gaps = 23/242 (9%)

Query: 389 FIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
           F  A    T+Q VP   P N    + +++      WNP   Q + G  +GYK+  W    
Sbjct: 504 FSRAVTEYTLQGVPTAPPQNVQ-AEAVNSTAIRFLWNPPPQQFINGINQGYKLLAWPADV 562

Query: 448 GEG----SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGV 503
            E     +I            T + KF   +  F  VL F    +GPPS      T E  
Sbjct: 563 PEAVTIVTIAPDFHGVHHGYITNLKKF---TAYFTSVLCFTTPGDGPPSMPQLIQTHEDK 619

Query: 504 PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLP--YISD 561
           PG V  L    +  ++  + W +P + NG++ G +          V P    LP   + D
Sbjct: 620 PGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGAE---HDAPRLIVMPAPSPLPPQTLID 676

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY--VPFKNPDNVEGRGSTPNNLV 619
               +    GL   T Y I +   T AG G  +       VP + P         P+NLV
Sbjct: 677 EGRDADGEFGLSSLTTYTIDVTAVTAAGAGLATSSTISSGVPPELP-------GAPSNLV 729

Query: 620 IS 621
           IS
Sbjct: 730 IS 731


>gi|296471082|tpg|DAA13197.1| TPA: L1 cell adhesion molecule isoform 2 [Bos taurus]
          Length = 1253

 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 138/474 (29%), Positives = 216/474 (45%), Gaps = 25/474 (5%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L + +V   D G Y 
Sbjct: 253 VALQGQPLILECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLNVGEEDDGEYR 311

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G  + ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 312 CLAENSLGSDR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 370

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + NL+ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 371 IPVEELGKDQKYRIHHGALVLSNLQPSDTMVTQCEARNRHGLLLANAYIYVVELPAKILT 430

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
              + Y  V G T  L C+ FGAP P V W+  + +  L   R+     G L I D+   
Sbjct: 431 PDNETYMAVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNGTLGIRDLQTN 490

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T I   P     + G    F C A  DPSL+ S
Sbjct: 491 DTGHYFCQAANDQSNVTIVANLQVKDATRIMQGPRSAIEKRGSRVMFTCQASFDPSLQHS 550

Query: 341 IVWLRGSEPIDFE----SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W R  + +D +    S+  F++  D  L +      D G Y+C A T+LD +E++A L
Sbjct: 551 TTWRR--DALDLQELGDSDKYFIE--DERLVIHSLDYSDQGNYSCVASTKLDVVESRAEL 606

Query: 397 TV-----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGS 451
            V      VP    S+  L++     +  +SW+P    +       Y ++   ++     
Sbjct: 607 LVVGSPGPVPQLELSDHHLLK---QSQVRLSWSPADDHN--APIEKYDIEFEDKEMAPEK 661

Query: 452 IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVP 504
              L    G  T+T + K  P      RV A N    G PS +  + VTPE  P
Sbjct: 662 WYSLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPDSETVVTPEAAP 714



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 152/572 (26%), Positives = 239/572 (41%), Gaps = 67/572 (11%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--NLRKSDTGN 194
           A + + +  EC A G P P I W+    P+    P  R     +  T++  N+ + D G 
Sbjct: 254 ALQGQPLILECIAEGFPTPTIKWLRPSGPM----PADRVTYQNHNKTLQLLNVGEEDDGE 309

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           Y C A NSLG      YV V A AP     P+      G+T  L C+V G P+PEV W  
Sbjct: 310 YRCLAENSLGSDRHAYYVTVEA-APYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRI 368

Query: 255 NQ---KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH-- 309
           N    +EL   +   +  G L ++++  +D+    C ARN+ G    +  + V E     
Sbjct: 369 NGIPVEELGKDQKYRIHHGALVLSNLQPSDTMVTQCEARNRHGLLLANAYIYVVELPAKI 428

Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
           +T   E Y    G +A   C A   P    S+ WL        + E RF    + +L + 
Sbjct: 429 LTPDNETYMAVQGSTAYLLCKAFGAPVP--SVQWLDREGKTVLQDE-RFFPYTNGTLGIR 485

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ----VIDAKKAVVSWNP 425
                D+G Y C+A  +      Q+ +T+   L+      ++Q     I+ + + V +  
Sbjct: 486 DLQTNDTGHYFCQAAND------QSNVTIVANLQVKDATRIMQGPRSAIEKRGSRVMF-- 537

Query: 426 VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNG 485
               + +  F      + T +     ++EL     +    E ++ V  S +++      G
Sbjct: 538 ----TCQASFDPSLQHSTTWRRDALDLQEL--GDSDKYFIEDERLVIHSLDYSD----QG 587

Query: 486 AYNGPPSEIISFVTPE------GVPGTVQSLEAIP---LGSSAFYLKWVKPEQPNGVLMG 536
            Y+   S  +  V         G PG V  LE      L  S   L W   +  N  +  
Sbjct: 588 NYSCVASTKLDVVESRAELLVVGSPGPVPQLELSDHHLLKQSQVRLSWSPADDHNAPIEK 647

Query: 537 YKIKYQSVKGTKVGP----LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 592
           Y I+++     ++ P     L ++P   + T+T+ KL+   P   Y   +    K G G 
Sbjct: 648 YDIEFED---KEMAPEKWYSLGKVP--GNQTSTTLKLS---PYVHYTFRVTAINKYGPGE 699

Query: 593 ESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
            S     V      P KNP +V+G G+  NN+VI+W  +  ++ NAP  +YR+ WR    
Sbjct: 700 PSPDSETVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRWMDWNAPQVQYRVQWRPQKM 759

Query: 647 GEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
             AW +  V D     LV++N  TF PYEIKV
Sbjct: 760 QGAWQEQIVSD---PFLVVSNTSTFVPYEIKV 788



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 146/591 (24%), Positives = 234/591 (39%), Gaps = 68/591 (11%)

Query: 44   VALRNKKVELFCIFGGTPLPQTIW-SKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
            +A++     L C   G P+P   W  ++G  +   +R      G +L I+ ++ +D G Y
Sbjct: 437  MAVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNG-TLGIRDLQTNDTGHY 495

Query: 103  TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP--EPEIHWV 160
             C+ +N      +   +L V  A      P          V F C+AS  P  +    W 
Sbjct: 496  FCQAANDQSNV-TIVANLQVKDATRIMQGPRSAIEKRGSRVMFTCQASFDPSLQHSTTWR 554

Query: 161  HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
             +   + +   + +  +   R+ I +L  SD GNY C A+  L  V     + V+     
Sbjct: 555  RDALDLQELGDSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDVVESRAELLVVGSPGP 614

Query: 221  ITEAP-KDEYTVDGKTVVLT---CRVFGAPKPEVNWIHNQKELTGGRYTILET--GDLKI 274
            + +    D + +    V L+        AP  + +     KE+   ++  L    G+   
Sbjct: 615  VPQLELSDHHLLKQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTS 674

Query: 275  TDVAFADSGEYT--CFARNKLGTAQGS--GSLTVKEHTHITDQPEDYEVEAGQSAT---- 326
            T +  +    YT    A NK G  + S      V         P D + E  ++      
Sbjct: 675  TTLKLSPYVHYTFRVTAINKYGPGEPSPDSETVVTPEAAPEKNPVDVKGEGNETNNMVIT 734

Query: 327  ---FRCNAVSDPSLKLSIVW----LRGSEPIDFESEPRFVQSNDYSL--------TVTKS 371
                R    + P ++  + W    ++G+      S+P  V SN  +         TV   
Sbjct: 735  WKPLRWMDWNAPQVQYRVQWRPQKMQGAWQEQIVSDPFLVVSNTSTFVPYEIKVQTVNSQ 794

Query: 372  SELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
             +    Q T     E D+ +A        PL  P     ++ +++   +V W  V P  +
Sbjct: 795  GKGPEPQITIGYSGE-DYPQAS-------PLLEP-----VKALNSSTVLVRWQSVDPAQV 841

Query: 432  RGHFRGYKVQTWTEKDGEGSIRE---LIVNKGE------STTTEVDKFVPASKNFARVLA 482
            +GH RGY V  W E    GS R+     V+KG       +T+T +    P S  +  V A
Sbjct: 842  KGHLRGYNVTYWWE----GSQRKHNKRHVHKGHVVVPANATSTILGGLRPYSSYWVEVQA 897

Query: 483  FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
            FNG   GP S + +F TPEGVPG  ++L       ++  L W  P   NGVL GY + YQ
Sbjct: 898  FNGRGLGPASGM-TFNTPEGVPGHPEALHLECQSDTSLLLHWQPPLSHNGVLTGYVLSYQ 956

Query: 543  SVK-GTKVGPLLERLPY-ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             +  G+K     E+L + + DP   +  L  L P  +YR  L   T+ G G
Sbjct: 957  PLNDGSK-----EQLSFDLPDPELRTHNLTNLSPRLRYRFQLQATTREGPG 1002



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 92/403 (22%), Positives = 168/403 (41%), Gaps = 36/403 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQ--------GNYGKSLIIK 92
           ++ V      V L C   G P  Q  W++DG+   P + +          G++  +    
Sbjct: 43  RRVVVFPTDDVSLKCEASGKPEVQFRWTRDGILFKPREELGMIVNQVPHSGSFSITGNSS 102

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
           +   S QG+Y C  SN +G A S+ I L     P +   TV+P  +   E E+V   C  
Sbjct: 103 NFAQSFQGTYRCFASNKLGTAMSHEIQLMAEGTPKWPKETVKP--VEVEEGESVILPCHP 160

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 161 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 218

Query: 205 YVYK---DVYV----NVLAHAPEI---TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K   D+ V    +++   P +   T +      + G+ ++L C   G P P + W+ 
Sbjct: 219 IIQKEPIDLRVKATNSMMDRKPHLLFPTNSSSHLVALQGQPLILECIAEGFPTPTIKWLR 278

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++ +V   D GEY C A N LG+ + +  +TV+   +   +
Sbjct: 279 PSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSDRHAYYVTVEAAPYWLHK 338

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++   + +  + +  +L ++    
Sbjct: 339 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELGKDQKYRIHHGALVLSNLQP 396

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP--LEAPSNFTLIQV 413
            D+    C A+     + A A +  V++P  +  P N T + V
Sbjct: 397 SDTMVTQCEARNRHGLLLANAYIYVVELPAKILTPDNETYMAV 439


>gi|300794021|ref|NP_001179364.1| neural cell adhesion molecule L1 precursor [Bos taurus]
 gi|296471081|tpg|DAA13196.1| TPA: L1 cell adhesion molecule isoform 1 [Bos taurus]
          Length = 1257

 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 138/474 (29%), Positives = 216/474 (45%), Gaps = 25/474 (5%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L + +V   D G Y 
Sbjct: 253 VALQGQPLILECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLNVGEEDDGEYR 311

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G  + ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 312 CLAENSLGSDR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 370

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + NL+ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 371 IPVEELGKDQKYRIHHGALVLSNLQPSDTMVTQCEARNRHGLLLANAYIYVVELPAKILT 430

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
              + Y  V G T  L C+ FGAP P V W+  + +  L   R+     G L I D+   
Sbjct: 431 PDNETYMAVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNGTLGIRDLQTN 490

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T I   P     + G    F C A  DPSL+ S
Sbjct: 491 DTGHYFCQAANDQSNVTIVANLQVKDATRIMQGPRSAIEKRGSRVMFTCQASFDPSLQHS 550

Query: 341 IVWLRGSEPIDFE----SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W R  + +D +    S+  F++  D  L +      D G Y+C A T+LD +E++A L
Sbjct: 551 TTWRR--DALDLQELGDSDKYFIE--DERLVIHSLDYSDQGNYSCVASTKLDVVESRAEL 606

Query: 397 TV-----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGS 451
            V      VP    S+  L++     +  +SW+P    +       Y ++   ++     
Sbjct: 607 LVVGSPGPVPQLELSDHHLLK---QSQVRLSWSPADDHN--APIEKYDIEFEDKEMAPEK 661

Query: 452 IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVP 504
              L    G  T+T + K  P      RV A N    G PS +  + VTPE  P
Sbjct: 662 WYSLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPDSETVVTPEAAP 714



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 152/572 (26%), Positives = 239/572 (41%), Gaps = 67/572 (11%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--NLRKSDTGN 194
           A + + +  EC A G P P I W+    P+    P  R     +  T++  N+ + D G 
Sbjct: 254 ALQGQPLILECIAEGFPTPTIKWLRPSGPM----PADRVTYQNHNKTLQLLNVGEEDDGE 309

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           Y C A NSLG      YV V A AP     P+      G+T  L C+V G P+PEV W  
Sbjct: 310 YRCLAENSLGSDRHAYYVTVEA-APYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRI 368

Query: 255 NQ---KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH-- 309
           N    +EL   +   +  G L ++++  +D+    C ARN+ G    +  + V E     
Sbjct: 369 NGIPVEELGKDQKYRIHHGALVLSNLQPSDTMVTQCEARNRHGLLLANAYIYVVELPAKI 428

Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
           +T   E Y    G +A   C A   P    S+ WL        + E RF    + +L + 
Sbjct: 429 LTPDNETYMAVQGSTAYLLCKAFGAPVP--SVQWLDREGKTVLQDE-RFFPYTNGTLGIR 485

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ----VIDAKKAVVSWNP 425
                D+G Y C+A  +      Q+ +T+   L+      ++Q     I+ + + V +  
Sbjct: 486 DLQTNDTGHYFCQAAND------QSNVTIVANLQVKDATRIMQGPRSAIEKRGSRVMF-- 537

Query: 426 VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNG 485
               + +  F      + T +     ++EL     +    E ++ V  S +++      G
Sbjct: 538 ----TCQASFDPSLQHSTTWRRDALDLQEL--GDSDKYFIEDERLVIHSLDYSD----QG 587

Query: 486 AYNGPPSEIISFVTPE------GVPGTVQSLEAIP---LGSSAFYLKWVKPEQPNGVLMG 536
            Y+   S  +  V         G PG V  LE      L  S   L W   +  N  +  
Sbjct: 588 NYSCVASTKLDVVESRAELLVVGSPGPVPQLELSDHHLLKQSQVRLSWSPADDHNAPIEK 647

Query: 537 YKIKYQSVKGTKVGP----LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 592
           Y I+++     ++ P     L ++P   + T+T+ KL+   P   Y   +    K G G 
Sbjct: 648 YDIEFED---KEMAPEKWYSLGKVP--GNQTSTTLKLS---PYVHYTFRVTAINKYGPGE 699

Query: 593 ESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
            S     V      P KNP +V+G G+  NN+VI+W  +  ++ NAP  +YR+ WR    
Sbjct: 700 PSPDSETVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRWMDWNAPQVQYRVQWRPQKM 759

Query: 647 GEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
             AW +  V D     LV++N  TF PYEIKV
Sbjct: 760 QGAWQEQIVSD---PFLVVSNTSTFVPYEIKV 788



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 146/591 (24%), Positives = 234/591 (39%), Gaps = 68/591 (11%)

Query: 44   VALRNKKVELFCIFGGTPLPQTIW-SKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
            +A++     L C   G P+P   W  ++G  +   +R      G +L I+ ++ +D G Y
Sbjct: 437  MAVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNG-TLGIRDLQTNDTGHY 495

Query: 103  TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP--EPEIHWV 160
             C+ +N      +   +L V  A      P          V F C+AS  P  +    W 
Sbjct: 496  FCQAANDQSNV-TIVANLQVKDATRIMQGPRSAIEKRGSRVMFTCQASFDPSLQHSTTWR 554

Query: 161  HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
             +   + +   + +  +   R+ I +L  SD GNY C A+  L  V     + V+     
Sbjct: 555  RDALDLQELGDSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDVVESRAELLVVGSPGP 614

Query: 221  ITEAP-KDEYTVDGKTVVLT---CRVFGAPKPEVNWIHNQKELTGGRYTILET--GDLKI 274
            + +    D + +    V L+        AP  + +     KE+   ++  L    G+   
Sbjct: 615  VPQLELSDHHLLKQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTS 674

Query: 275  TDVAFADSGEYT--CFARNKLGTAQGS--GSLTVKEHTHITDQPEDYEVEAGQSAT---- 326
            T +  +    YT    A NK G  + S      V         P D + E  ++      
Sbjct: 675  TTLKLSPYVHYTFRVTAINKYGPGEPSPDSETVVTPEAAPEKNPVDVKGEGNETNNMVIT 734

Query: 327  ---FRCNAVSDPSLKLSIVW----LRGSEPIDFESEPRFVQSNDYSL--------TVTKS 371
                R    + P ++  + W    ++G+      S+P  V SN  +         TV   
Sbjct: 735  WKPLRWMDWNAPQVQYRVQWRPQKMQGAWQEQIVSDPFLVVSNTSTFVPYEIKVQTVNSQ 794

Query: 372  SELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
             +    Q T     E D+ +A        PL  P     ++ +++   +V W  V P  +
Sbjct: 795  GKGPEPQITIGYSGE-DYPQAS-------PLLEP-----VKALNSSTVLVRWQSVDPAQV 841

Query: 432  RGHFRGYKVQTWTEKDGEGSIRE---LIVNKGE------STTTEVDKFVPASKNFARVLA 482
            +GH RGY V  W E    GS R+     V+KG       +T+T +    P S  +  V A
Sbjct: 842  KGHLRGYNVTYWWE----GSQRKHNKRHVHKGHVVVPANATSTILGGLRPYSSYWVEVQA 897

Query: 483  FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
            FNG   GP S + +F TPEGVPG  ++L       ++  L W  P   NGVL GY + YQ
Sbjct: 898  FNGRGLGPASGM-TFNTPEGVPGHPEALHLECQSDTSLLLHWQPPLSHNGVLTGYVLSYQ 956

Query: 543  SVK-GTKVGPLLERLPY-ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             +  G+K     E+L + + DP   +  L  L P  +YR  L   T+ G G
Sbjct: 957  PLNDGSK-----EQLSFDLPDPELRTHNLTNLSPRLRYRFQLQATTREGPG 1002



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 92/403 (22%), Positives = 168/403 (41%), Gaps = 36/403 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQ--------GNYGKSLIIK 92
           ++ V      V L C   G P  Q  W++DG+   P + +          G++  +    
Sbjct: 43  RRVVVFPTDDVSLKCEASGKPEVQFRWTRDGILFKPREELGMIVNQVPHSGSFSITGNSS 102

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
           +   S QG+Y C  SN +G A S+ I L     P +   TV+P  +   E E+V   C  
Sbjct: 103 NFAQSFQGTYRCFASNKLGTAMSHEIQLMAEGTPKWPKETVKP--VEVEEGESVILPCHP 160

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 161 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 218

Query: 205 YVYK---DVYV----NVLAHAPEI---TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K   D+ V    +++   P +   T +      + G+ ++L C   G P P + W+ 
Sbjct: 219 IIQKEPIDLRVKATNSMMDRKPHLLFPTNSSSHLVALQGQPLILECIAEGFPTPTIKWLR 278

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++ +V   D GEY C A N LG+ + +  +TV+   +   +
Sbjct: 279 PSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSDRHAYYVTVEAAPYWLHK 338

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++   + +  + +  +L ++    
Sbjct: 339 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELGKDQKYRIHHGALVLSNLQP 396

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP--LEAPSNFTLIQV 413
            D+    C A+     + A A +  V++P  +  P N T + V
Sbjct: 397 SDTMVTQCEARNRHGLLLANAYIYVVELPAKILTPDNETYMAV 439


>gi|410920631|ref|XP_003973787.1| PREDICTED: contactin-4-like [Takifugu rubripes]
          Length = 1035

 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 184/728 (25%), Positives = 297/728 (40%), Gaps = 104/728 (14%)

Query: 47  RNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           +   V+L C   G P+P   W + DGV    S ++        L I + +  D G+Y C 
Sbjct: 249 KGSTVKLECFALGNPVPSINWRRVDGVSF--SRKVDTRKASGVLEIPYFQQEDAGTYECV 306

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             N  G   +    LS  A P    +P  +    ++++ +ECKA+G P+P   W+ NG+ 
Sbjct: 307 AENSRG-MNTVKGKLSFYAPPQLIEKPRDVQKLIDDSLVWECKATGKPKPSYRWMKNGEN 365

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +   P   R +V    ++I  L  SDTG Y C A N  G  Y +  + V+A AP+ ++  
Sbjct: 366 LE--PSEERIQVANGALSISRLTLSDTGMYQCVAGNKHGEAYSNAELRVIAVAPDFSQNQ 423

Query: 226 KDEYTV--DGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADS 282
               T+   G   ++ C+   +P   V+W      L    R +IL  G L+I +   +D+
Sbjct: 424 LKSQTLVKAGGDALIECKPKMSPWGVVSWRKGSDPLRESNRISILANGSLRIWNATKSDA 483

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC ARN+ G A  +G+L+VKE T IT  P   +V  G+S    C    DPSL+L   
Sbjct: 484 GLYTCIARNQFGVASSTGTLSVKEPTIITTPPSTLDVTVGESMVLPCQVSHDPSLELKFT 543

Query: 343 WLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           W    + I F S   F      Q +   + +       +G+YTC  QT++D I     L 
Sbjct: 544 WFFNEQLIHFGSHGGFFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSISIALDLI 603

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSIR 453
           V+ P   P++  + ++ID   A +SW P  P +       Y +Q  T          ++ 
Sbjct: 604 VRGPPGPPTSVHVEEIIDT-TASLSWRP-GPDN-HSPITAYTIQARTPFSLGWQAVTTVP 660

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE---------IISFVTPEGVP 504
           E++   G      V +  P  +   RVLA N    G PS+             VTP  V 
Sbjct: 661 EVVA--GHQLRATVTELSPWVEYEFRVLASNTIGTGEPSKPSKQARTKGTYPKVTPANVS 718

Query: 505 GTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
           G   S        S   + W  V  E  NG   GY + ++    T  G +   +P  ++ 
Sbjct: 719 GGGGS-------RSELVITWEPVPEEFQNGPGFGYVVAFRPHGAT--GWMQAAVP-TAEA 768

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDG----------AESKYLFYVPFKNPDNVEGRG 612
           +    K   ++P + + + +  Y   G+G          AE +     P + P  V  + 
Sbjct: 769 SRYVFKNESIQPFSPFHVKVGVYNNEGEGPFGPVTTIYSAEEE-----PGRAPTRVRAKS 823

Query: 613 STPNNLVISWTAMP--EIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT 670
            + + + +SW A+P    +     F+ R +W R                           
Sbjct: 824 LSASEIEVSWKALPWSVSKRRVLGFEVR-YWSR--------------------------- 855

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
                       +EK+   S++  +   G  T+T +     ++  +  V A+N A  GPP
Sbjct: 856 ------------SEKEDMASVQRTV---GNQTSTVIRGVKGSTTYYISVRAYNTAGTGPP 900

Query: 731 SEIISFVT 738
           S  ++  T
Sbjct: 901 SNTVNVTT 908



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 163/626 (26%), Positives = 253/626 (40%), Gaps = 60/626 (9%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V + +       ++           P   V+ PEF++ 
Sbjct: 188 NLYIAKVEPSDVGNYTCVVTNTVTKTRVQGPPTPLVLRSDGVMGEYEPKIEVQFPEFVHV 247

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I+W   +G   S+   + R+  G   + I   ++ D G Y 
Sbjct: 248 AKGSTVKLECFALGNPVPSINWRRVDGVSFSRK-VDTRKASG--VLEIPYFQQEDAGTYE 304

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       ++  A  P++ E P+D   +   ++V  C+  G PKP   W+ N 
Sbjct: 305 CVAENSRGMNTVKGKLSFYA-PPQLIEKPRDVQKLIDDSLVWECKATGKPKPSYRWMKNG 363

Query: 257 KELTGGRYTI-LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE 315
           + L      I +  G L I+ +  +D+G Y C A NK G A  +  L V        Q +
Sbjct: 364 ENLEPSEERIQVANGALSISRLTLSDTGMYQCVAGNKHGEAYSNAELRVIAVAPDFSQNQ 423

Query: 316 ---DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
                 V+AG  A   C     P   +S  W +GS+P+  ES    + +N  SL +  ++
Sbjct: 424 LKSQTLVKAGGDALIECKPKMSPWGVVS--WRKGSDPLR-ESNRISILANG-SLRIWNAT 479

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           + D+G YTC A+ +     +  TL+V+ P    +  + + V   +  V+        SL 
Sbjct: 480 KSDAGLYTCIARNQFGVASSTGTLSVKEPTIITTPPSTLDVTVGESMVLPCQVSHDPSLE 539

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEV--------DKFVPA--SKNFARVLA 482
             F  +  +        G   E +  +  +    +         K+  A  +K  +  +A
Sbjct: 540 LKFTWFFNEQLIHFGSHGGFFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSISIA 599

Query: 483 FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
            +    GPP          G P +V   E I   +S   L W      +  +  Y I  Q
Sbjct: 600 LDLIVRGPP----------GPPTSVHVEEIIDTTAS---LSWRPGPDNHSPITAYTI--Q 644

Query: 543 SVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK------ 595
           +     +G   +  +P +       A +  L P  +Y   +      G G  SK      
Sbjct: 645 ARTPFSLGWQAVTTVPEVVAGHQLRATVTELSPWVEYEFRVLASNTIGTGEPSKPSKQAR 704

Query: 596 YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDV 655
                P   P NV G G + + LVI+W  +PE   N P F Y + +R H     W Q  V
Sbjct: 705 TKGTYPKVTPANVSGGGGSRSELVITWEPVPEEFQNGPGFGYVVAFRPHG-ATGWMQAAV 763

Query: 656 LDWRQSELVLAN---QPTFQPYEIKV 678
                S  V  N   QP F P+ +KV
Sbjct: 764 PTAEASRYVFKNESIQP-FSPFHVKV 788



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 154/688 (22%), Positives = 268/688 (38%), Gaps = 90/688 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSD-RISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113
           C   G P P   W K+G  + PS+ RI   N   +L I  +  SD G Y C   N  GEA
Sbjct: 347 CKATGKPKPSYRWMKNGENLEPSEERIQVAN--GALSISRLTLSDTGMYQCVAGNKHGEA 404

Query: 114 KSYSIDLSVLAAPYFTVEPEFI-NAAEEETVT-------FECKASGLPEPEIHWVHNGKP 165
            S + +L V+A     V P+F  N  + +T+         ECK    P   + W     P
Sbjct: 405 YS-NAELRVIA-----VAPDFSQNQLKSQTLVKAGGDALIECKPKMSPWGVVSWRKGSDP 458

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           + ++  N    +    + I N  KSD G Y C A N  G       ++V    P I   P
Sbjct: 459 LRES--NRISILANGSLRIWNATKSDAGLYTCIARNQFGVASSTGTLSV--KEPTIITTP 514

Query: 226 KDEYTVD-GKTVVLTCRVFGAPKPEV--NWIHNQK-----------ELTGGRYTILETGD 271
                V  G+++VL C+V   P  E+   W  N++           E  GG+++    GD
Sbjct: 515 PSTLDVTVGESMVLPCQVSHDPSLELKFTWFFNEQLIHFGSHGGFFEKVGGQHS---AGD 571

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE--AGQSATFRC 329
           + I ++    +G+YTC  + K+ +   +  L V+        P    VE     +A+   
Sbjct: 572 IMIRNIQLRHAGKYTCAVQTKVDSISIALDLIVRGPP---GPPTSVHVEEIIDTTASLSW 628

Query: 330 NAVSDPSLKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
               D    ++   ++   P         + P  V  +    TVT+ S     ++   A 
Sbjct: 629 RPGPDNHSPITAYTIQARTPFSLGWQAVTTVPEVVAGHQLRATVTELSPWVEYEFRVLAS 688

Query: 385 TELDFIE-----AQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYK 439
             +   E      QA      P   P+N +        + V++W PV  +   G   GY 
Sbjct: 689 NTIGTGEPSKPSKQARTKGTYPKVTPANVSGGGG-SRSELVITWEPVPEEFQNGPGFGY- 746

Query: 440 VQTWTEKDGEGSIRELIVNKGESTTTEVDKFV-------PASKNFARVLAFNGAYNGPPS 492
           V  +      G ++  +       T E  ++V       P S    +V  +N    GP  
Sbjct: 747 VVAFRPHGATGWMQAAV------PTAEASRYVFKNESIQPFSPFHVKVGVYNNEGEGPFG 800

Query: 493 EIISFVTPEGVPGTV------QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKG 546
            + +  + E  PG        +SL A  +  S   L W   ++    ++G++++Y S   
Sbjct: 801 PVTTIYSAEEEPGRAPTRVRAKSLSASEIEVSWKALPWSVSKR---RVLGFEVRYWSRSE 857

Query: 547 TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV----PF 602
            +    ++R    +    TS  + G++ ST Y I +  Y  AG G  S  +       P 
Sbjct: 858 KEDMASVQR----TVGNQTSTVIRGVKGSTTYYISVRAYNTAGTGPPSNTVNVTTKKPPP 913

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
             P       ++ + ++++W  +  +E+ +    Y++ ++++      +  +V++   + 
Sbjct: 914 SQPPAKVMWNTSDSKIILNWERVKALENESEVTGYKVLYKKNRH----SHPNVMETNTTS 969

Query: 663 LVLANQPTFQPYEIKVVQTWTEKDGEGS 690
           + LA  PT + Y I++       DG  S
Sbjct: 970 VELA-LPTDEDYIIQIKPFGEGGDGSSS 996



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 145/369 (39%), Gaps = 45/369 (12%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLIIKHVEFSD 98
           E   RNK+V   C   G+P P   W  +G  I+        +S GN   S + K     D
Sbjct: 46  ETLERNKEVVFSCEAQGSPPPSYRWKLNGTEISSKYGSHYILSGGNLRISRLNKD---QD 102

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPE- 156
            G+Y C  SN  G   S    L+      F T     ++  E + V   C     P P  
Sbjct: 103 AGTYQCLASNSFGTIVSREASLTFAYLENFKTQRRSSVSVREGQGVVLLCG----PPPHS 158

Query: 157 ----IHWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLG------ 204
                 W+ N  P +    + RR +      + I  +  SD GNY C  TN++       
Sbjct: 159 GDLVFSWIFNEYP-TFVKQDTRRFISQETGNLYIAKVEPSDVGNYTCVVTNTVTKTRVQG 217

Query: 205 ----YVYKDVYVNVLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL 259
                V +   V +  + P+I  + P+  +   G TV L C   G P P +NW    + +
Sbjct: 218 PPTPLVLRSDGV-MGEYEPKIEVQFPEFVHVAKGSTVKLECFALGNPVPSINW----RRV 272

Query: 260 TGGRY-----TILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
            G  +     T   +G L+I      D+G Y C A N  G     G L+      + ++P
Sbjct: 273 DGVSFSRKVDTRKASGVLEIPYFQQEDAGTYECVAENSRGMNTVKGKLSFYAPPQLIEKP 332

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
            D +     S  + C A   P  K S  W++  E  + E     +Q  + +L++++ +  
Sbjct: 333 RDVQKLIDDSLVWECKATGKP--KPSYRWMKNGE--NLEPSEERIQVANGALSISRLTLS 388

Query: 375 DSGQYTCRA 383
           D+G Y C A
Sbjct: 389 DTGMYQCVA 397



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 119/309 (38%), Gaps = 42/309 (13%)

Query: 123 LAAPYFTVEPEFI-----NAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
           L +P FT +P  I          + V F C+A G P P   W  NG  IS    +     
Sbjct: 29  LQSPVFTKQPGSIVYPVETLERNKEVVFSCEAQGSPPPSYRWKLNGTEISSKYGSHYILS 88

Query: 178 GPNRITIENLRK-SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKT 235
           G N + I  L K  D G Y C A+NS G +         A+        +   +V +G+ 
Sbjct: 89  GGN-LRISRLNKDQDAGTYQCLASNSFGTIVSREASLTFAYLENFKTQRRSSVSVREGQG 147

Query: 236 VVLTCRVFGAPKPE-----VNWIHNQ-----KELTGGRYTILETGDLKITDVAFADSGEY 285
           VVL C     P P       +WI N+     K+ T  R+   ETG+L I  V  +D G Y
Sbjct: 148 VVLLC----GPPPHSGDLVFSWIFNEYPTFVKQDT-RRFISQETGNLYIAKVEPSDVGNY 202

Query: 286 TCFARNKLGT--AQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSD 334
           TC   N +     QG  +  V     +  +         PE   V  G +    C A+ +
Sbjct: 203 TCVVTNTVTKTRVQGPPTPLVLRSDGVMGEYEPKIEVQFPEFVHVAKGSTVKLECFALGN 262

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYS--LTVTKSSELDSGQYTCRAQTELDFIEA 392
           P    SI W R    +D  S  R V +   S  L +    + D+G Y C A+        
Sbjct: 263 PV--PSINWRR----VDGVSFSRKVDTRKASGVLEIPYFQQEDAGTYECVAENSRGMNTV 316

Query: 393 QATLTVQVP 401
           +  L+   P
Sbjct: 317 KGKLSFYAP 325



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 16/188 (8%)

Query: 414 IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWT--EKDGEGSIRELIVNKGESTTTEVDKFV 471
           + A +  VSW  +     +    G++V+ W+  EK+   S++  +   G  T+T +    
Sbjct: 824 LSASEIEVSWKALPWSVSKRRVLGFEVRYWSRSEKEDMASVQRTV---GNQTSTVIRGVK 880

Query: 472 PASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQ 529
            ++  +  V A+N A  GPPS  ++  T +  P    +        S   L W  VK  +
Sbjct: 881 GSTTYYISVRAYNTAGTGPPSNTVNVTTKKPPPSQPPAKVMWNTSDSKIILNWERVKALE 940

Query: 530 PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
               + GYK+ Y+  + +         P + +  TTS +LA L     Y I +  + + G
Sbjct: 941 NESEVTGYKVLYKKNRHSH--------PNVMETNTTSVELA-LPTDEDYIIQIKPFGEGG 991

Query: 590 DGAESKYL 597
           DG+ SK +
Sbjct: 992 DGSSSKQI 999


>gi|395545762|ref|XP_003774767.1| PREDICTED: neural cell adhesion molecule L1 [Sarcophilus harrisii]
          Length = 1248

 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 146/527 (27%), Positives = 232/527 (44%), Gaps = 25/527 (4%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VALR + + L CI  G P P   WS     +  + R++  N+ K+L +  VE  D G Y 
Sbjct: 246 VALRGQPLVLECIAEGFPTPTIKWSYPSNQMQ-AGRVTYQNFNKTLRLVRVEEEDDGEYR 304

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ +   ++V AAPY+  EPE +  A  ET    C+  G P P + W  NG
Sbjct: 305 CWAENTLGMAQ-HVYYVTVEAAPYWLQEPESLVLAPGETARLNCQVQGRPRPMVTWRING 363

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +     + + +V    + + N++ +DT    C A N  G +  + Y+ V+    +I  
Sbjct: 364 ISLENLTRDDKLRVQGGALILSNVQPNDTMVTQCEARNKHGLLLANAYIFVVQLPTKILT 423

Query: 224 APKDEYT-VDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
                Y  V G T  L C  FG P P + W+   +   L   R+     G L I D+   
Sbjct: 424 PDSKTYREVQGSTAYLLCNAFGVPMPRIQWLTRDRATVLQDERFVPFANGSLAIRDLRIN 483

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N   T      L VKE T I   P++  V+ G +  F C    DPSL++ 
Sbjct: 484 DTGSYFCEADNDQNTVAIQAHLQVKEATQIKKGPQNQIVKKGSNVNFMCQVSFDPSLEIQ 543

Query: 341 IVWLRGSEPI-DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           I W    + I D  S+ +++   +  LT+      D G Y+C  +T LD +E +A L V 
Sbjct: 544 INWYWNDQNIKDIFSDDKYILKEE-ELTIKNLDYSDQGNYSCVVKTALDSVEKKAALLV- 601

Query: 400 VPLEAPSNFTLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIV 457
             + +P     +++   K  +  +SW+P    +       Y +         G   +L  
Sbjct: 602 --VGSPGPVGQVELYKQKDFQVQLSWSPAEEHN--SPIEKYNIYFEDRTLDPGFWHQLAT 657

Query: 458 NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGTVQSL------ 510
             G  T+T++ K  P      RV+A N      PS +   FVTP+ VP    S       
Sbjct: 658 VPGNETSTKL-KLSPFIHYNFRVVASNKYGTSDPSPDSELFVTPKSVPEKNPSDVKGEGN 716

Query: 511 EAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLP 557
           E   +  +   LKW+     NG+ + Y+++++    ++   ++ R P
Sbjct: 717 ETNNMVITWMPLKWM---DWNGMELKYRVQWRQKNESEWQEVMARAP 760



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 156/572 (27%), Positives = 236/572 (41%), Gaps = 71/572 (12%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS------ 190
           A   + +  EC A G P P I W +           P  ++   R+T +N  K+      
Sbjct: 247 ALRGQPLVLECIAEGFPTPTIKWSY-----------PSNQMQAGRVTYQNFNKTLRLVRV 295

Query: 191 ---DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPK 247
              D G Y C A N+LG      YV V A AP   + P+      G+T  L C+V G P+
Sbjct: 296 EEEDDGEYRCWAENTLGMAQHVYYVTVEA-APYWLQEPESLVLAPGETARLNCQVQGRPR 354

Query: 248 PEVNWIHN---QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTV 304
           P V W  N    + LT      ++ G L +++V   D+    C ARNK G    +  + V
Sbjct: 355 PMVTWRINGISLENLTRDDKLRVQGGALILSNVQPNDTMVTQCEARNKHGLLLANAYIFV 414

Query: 305 KE--HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
            +     +T   + Y    G +A   CNA   P  +  I WL        + E RFV   
Sbjct: 415 VQLPTKILTPDSKTYREVQGSTAYLLCNAFGVPMPR--IQWLTRDRATVLQDE-RFVPFA 471

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKA 419
           + SL +      D+G Y C A  + + +  QA L V+   +    P N    Q++     
Sbjct: 472 NGSLAIRDLRINDTGSYFCEADNDQNTVAIQAHLQVKEATQIKKGPQN----QIVKKGSN 527

Query: 420 V-----VSWNPVSPQSLRGHFRGYKVQTWTEKDGEG--SIRELIVNKGESTTTEVDKFVP 472
           V     VS++P    SL      Y    W +++ +   S  + I+ + E T   +D    
Sbjct: 528 VNFMCQVSFDP----SLEIQINWY----WNDQNIKDIFSDDKYILKEEELTIKNLD--YS 577

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
              N++ V+    A +    +    V   G PG V  +E          L W   E+ N 
Sbjct: 578 DQGNYSCVV--KTALDSVEKKAALLVV--GSPGPVGQVELYKQKDFQVQLSWSPAEEHNS 633

Query: 533 VLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG--D 590
            +  Y I ++  +    G   +      + T+T  KL+   P   Y   +    K G  D
Sbjct: 634 PIEKYNIYFED-RTLDPGFWHQLATVPGNETSTKLKLS---PFIHYNFRVVASNKYGTSD 689

Query: 591 GAESKYLFY----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
            +    LF     VP KNP +V+G G+  NN+VI+W  +  ++ N    KYR+ WR+ N 
Sbjct: 690 PSPDSELFVTPKSVPEKNPSDVKGEGNETNNMVITWMPLKWMDWNGMELKYRVQWRQKNE 749

Query: 647 GEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            E W +   +  R    V++N PTF PYEIKV
Sbjct: 750 SE-WQE---VMARAPSFVVSNTPTFVPYEIKV 777



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 143/565 (25%), Positives = 216/565 (38%), Gaps = 37/565 (6%)

Query: 53  LFCIFGGTPLPQTIW-SKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVG 111
           L C   G P+P+  W ++D   +   +R      G SL I+ +  +D GSY CE  N   
Sbjct: 439 LLCNAFGVPMPRIQWLTRDRATVLQDERFVPFANG-SLAIRDLRINDTGSYFCEADNDQN 497

Query: 112 EAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP--EPEIHWVHNGKPISQA 169
              +    L V  A      P+     +   V F C+ S  P  E +I+W  N + I   
Sbjct: 498 TV-AIQAHLQVKEATQIKKGPQNQIVKKGSNVNFMCQVSFDPSLEIQINWYWNDQNIKDI 556

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
             + +  +    +TI+NL  SD GNY C    +L  V K   + V+     + +   + Y
Sbjct: 557 FSDDKYILKEEELTIKNLDYSDQGNYSCVVKTALDSVEKKAALLVVGSPGPVGQV--ELY 614

Query: 230 TVDGKTVVLT---CRVFGAPKPEVNWIHNQKELTGGRYTILET--GDLKITDVAFADSGE 284
                 V L+        +P  + N     + L  G +  L T  G+   T +  +    
Sbjct: 615 KQKDFQVQLSWSPAEEHNSPIEKYNIYFEDRTLDPGFWHQLATVPGNETSTKLKLSPFIH 674

Query: 285 YT--CFARNKLGTAQGS--GSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV-------S 333
           Y     A NK GT+  S    L V   +     P D + E  ++       +       +
Sbjct: 675 YNFRVVASNKYGTSDPSPDSELFVTPKSVPEKNPSDVKGEGNETNNMVITWMPLKWMDWN 734

Query: 334 DPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393
              LK  + W + +E     SE + V +   S  V+ +      +   +A  E+      
Sbjct: 735 GMELKYRVQWRQKNE-----SEWQEVMARAPSFVVSNTPTFVPYEIKVQAVNEVGKGPDP 789

Query: 394 ATLTVQVPLEAPSNFTLIQV--IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWT-----EK 446
             +      + P    +I +  ++A    + W PV    +RGH RGYKV  W       +
Sbjct: 790 QIVIGYSGEDVPQAIPIIDIESLNATSVKIKWGPVDLNKVRGHLRGYKVTYWWVNSRWSR 849

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGT 506
               S +  I     +T   +    P S    +V  FNG   GPPSE   F T EGVP  
Sbjct: 850 SKRHSSKMSIERPASATEAVLSDLRPYSIYNVQVQVFNGRGLGPPSETRQFHTEEGVPDR 909

Query: 507 VQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
            QSL    L  +A  L W  P  PNG L GY++ Y+++         E+      PT   
Sbjct: 910 PQSLHLRRLSDTALQLSWKPPLNPNGELKGYQLFYEAINQETEEK--EKKNQTLHPTILM 967

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDG 591
             L+GL P   Y   L   T  G G
Sbjct: 968 LNLSGLSPQALYHFQLRATTSVGPG 992



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 148/636 (23%), Positives = 259/636 (40%), Gaps = 65/636 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY-GKSLIIKHVEFSDQGSYTCEVSN--G 109
           L C   G P P   W  +G+ +    R  +    G +LI+ +V+ +D     CE  N  G
Sbjct: 345 LNCQVQGRPRPMVTWRINGISLENLTRDDKLRVQGGALILSNVQPNDTMVTQCEARNKHG 404

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
           +  A +Y I +  L     T + +     +  T    C A G+P P I W+   +  +  
Sbjct: 405 LLLANAY-IFVVQLPTKILTPDSKTYREVQGSTAYLLCNAFGVPMPRIQWLTRDR--ATV 461

Query: 170 PPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
             + R     N  + I +LR +DTG+Y C A N    V    ++ V   A +I + P+++
Sbjct: 462 LQDERFVPFANGSLAIRDLRINDTGSYFCEADNDQNTVAIQAHLQV-KEATQIKKGPQNQ 520

Query: 229 YTVDGKTVVLTCRVFGAPKPEV--NWI---HNQKELTGGRYTILETGDLKITDVAFADSG 283
               G  V   C+V   P  E+  NW     N K++      IL+  +L I ++ ++D G
Sbjct: 521 IVKKGSNVNFMCQVSFDPSLEIQINWYWNDQNIKDIFSDDKYILKEEELTIKNLDYSDQG 580

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTHITDQPE-----DYEVEAGQSATFRCNA------- 331
            Y+C  +  L + +   +L V        Q E     D++V+   S     N+       
Sbjct: 581 NYSCVVKTALDSVEKKAALLVVGSPGPVGQVELYKQKDFQVQLSWSPAEEHNSPIEKYNI 640

Query: 332 -----VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
                  DP     +  + G+E         F+    Y+  V  S++   G       +E
Sbjct: 641 YFEDRTLDPGFWHQLATVPGNETSTKLKLSPFIH---YNFRVVASNKY--GTSDPSPDSE 695

Query: 387 LDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
           L F+  ++     VP + PS+    +  +    V++W P+      G    Y+VQ W +K
Sbjct: 696 L-FVTPKS-----VPEKNPSDVKG-EGNETNNMVITWMPLKWMDWNGMELKYRVQ-WRQK 747

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGT 506
           + E   +E++        +    FVP      +V A N    GP  +I+   + E VP  
Sbjct: 748 N-ESEWQEVMARAPSFVVSNTPTFVPYE---IKVQAVNEVGKGPDPQIVIGYSGEDVPQA 803

Query: 507 VQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSV--KGTKVGPLLERLPYISDP 562
           +  ++   L +++  +KW  V   +  G L GYK+ Y  V  + ++      ++      
Sbjct: 804 IPIIDIESLNATSVKIKWGPVDLNKVRGHLRGYKVTYWWVNSRWSRSKRHSSKMSIERPA 863

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEGRGSTPNN 617
           + T A L+ L P + Y + +  +   G G  S+   +     VP + P ++  R  +   
Sbjct: 864 SATEAVLSDLRPYSIYNVQVQVFNGRGLGPPSETRQFHTEEGVPDR-PQSLHLRRLSDTA 922

Query: 618 LVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQD 653
           L +SW   P +  N     Y++F+      EA NQ+
Sbjct: 923 LQLSWK--PPLNPNGELKGYQLFY------EAINQE 950



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 92/388 (23%), Positives = 162/388 (41%), Gaps = 34/388 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR---ISQGNYGKSLII---KHV 94
           ++ V     ++ L C   G P  Q  W+K+ +  +P      I+  N G   I     + 
Sbjct: 38  ERLVVFPTDEISLKCEASGKPEVQFRWTKENIHFSPEKEPGVITHMNSGSFTITGNNSNF 97

Query: 95  EFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECK-AS 150
               QG+Y C  SN +G A S+ I L    AP +    V+P      E ++V   C   +
Sbjct: 98  AHHYQGTYRCFASNRLGTAMSHEIQLVAEGAPKWPKEKVQP--FEVEEGQSVVLPCNPPA 155

Query: 151 GLPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNATNSLG---Y 205
            + +P I+W+++   I     + R  +G N  +   N+  +D+  +Y C+A + LG    
Sbjct: 156 SVVQPRIYWMNSR--IFHIAQDERVTMGQNGNLYFANVLTNDSHSDYICHA-HFLGARTI 212

Query: 206 VYK---DVYV----NVLAHAPEIT---EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
           + K   D+ V    N++   P +            + G+ +VL C   G P P + W + 
Sbjct: 213 MQKEPIDLRVKPTNNMIYRRPRLLLPEGLTSRLVALRGQPLVLECIAEGFPTPTIKWSYP 272

Query: 256 QKELTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
             ++  GR T       L++  V   D GEY C+A N LG AQ    +TV+   +   +P
Sbjct: 273 SNQMQAGRVTYQNFNKTLRLVRVEEEDDGEYRCWAENTLGMAQHVYYVTVEAAPYWLQEP 332

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           E   +  G++A   C     P  +  + W      ++  +    ++    +L ++     
Sbjct: 333 ESLVLAPGETARLNCQVQGRP--RPMVTWRINGISLENLTRDDKLRVQGGALILSNVQPN 390

Query: 375 DSGQYTCRAQTELDFIEAQA-TLTVQVP 401
           D+    C A+ +   + A A    VQ+P
Sbjct: 391 DTMVTQCEARNKHGLLLANAYIFVVQLP 418



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 53/127 (41%), Gaps = 11/127 (8%)

Query: 215 LAHAPEITE-APKDEYTVDGKTVVLTCRVFGAPKPEVNW----IHNQKELTGGRYTILET 269
           L   P ITE +P+         + L C   G P+ +  W    IH   E   G  T + +
Sbjct: 26  LMQPPNITEQSPERLVVFPTDEISLKCEASGKPEVQFRWTKENIHFSPEKEPGVITHMNS 85

Query: 270 GDLKIT----DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQ 323
           G   IT    + A    G Y CFA N+LGTA       V E       ++ + +EVE GQ
Sbjct: 86  GSFTITGNNSNFAHHYQGTYRCFASNRLGTAMSHEIQLVAEGAPKWPKEKVQPFEVEEGQ 145

Query: 324 SATFRCN 330
           S    CN
Sbjct: 146 SVVLPCN 152



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 80/346 (23%), Positives = 135/346 (39%), Gaps = 59/346 (17%)

Query: 132 PEFINAAEEETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITI----EN 186
           PE +     + ++ +C+ASG PE +  W       S +  P     +     TI     N
Sbjct: 37  PERLVVFPTDEISLKCEASGKPEVQFRWTKENIHFSPEKEPGVITHMNSGSFTITGNNSN 96

Query: 187 LRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFG 244
                 G Y C A+N LG         V   AP+  +     + V +G++VVL C     
Sbjct: 97  FAHHYQGTYRCFASNRLGTAMSHEIQLVAEGAPKWPKEKVQPFEVEEGQSVVLPCNPPAS 156

Query: 245 APKPEVNWIHNQ--KELTGGRYTILETGDLKITDVAFADS-GEYTCFARNKLGTAQGSGS 301
             +P + W++++        R T+ + G+L   +V   DS  +Y C A + LG       
Sbjct: 157 VVQPRIYWMNSRIFHIAQDERVTMGQNGNLYFANVLTNDSHSDYICHA-HFLGA------ 209

Query: 302 LTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS-LKLSIVWLRGSEPIDFE------- 353
                 T +  +P D  V+   +  +R   +  P  L   +V LRG +P+  E       
Sbjct: 210 -----RTIMQKEPIDLRVKPTNNMIYRRPRLLLPEGLTSRLVALRG-QPLVLECIAEGFP 263

Query: 354 ------SEPR--------FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
                 S P           Q+ + +L + +  E D G+Y C A+  L   +    +TV+
Sbjct: 264 TPTIKWSYPSNQMQAGRVTYQNFNKTLRLVRVEEEDDGEYRCWAENTLGMAQHVYYVTVE 323

Query: 400 VP---LEAPSNFTL---------IQVIDAKKAVVSW--NPVSPQSL 431
                L+ P +  L          QV    + +V+W  N +S ++L
Sbjct: 324 AAPYWLQEPESLVLAPGETARLNCQVQGRPRPMVTWRINGISLENL 369


>gi|355568883|gb|EHH25164.1| hypothetical protein EGK_08937 [Macaca mulatta]
          Length = 1851

 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 141/500 (28%), Positives = 213/500 (42%), Gaps = 22/500 (4%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA 199
           E+ V   C+A G+P P I W  +   +        R+     + I  L   DTG + C A
Sbjct: 2   EKVVDIPCRAKGVPPPSITWYKDAAVVEVEKLARFRQRSDGGLQISGLVPDDTGMFQCFA 61

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL 259
            N+ G V    Y+ V + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L
Sbjct: 62  RNAAGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERIL 121

Query: 260 TGG-----RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
             G     R+T LE+G L I+    +D+G YTC A N  G  + S  L V   T IT  P
Sbjct: 122 ASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPP 181

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           +D  V  G  A+  C    DP + +  +W +    +  ES PR     + SL ++++   
Sbjct: 182 QDQSVIKGTQASMVCGVSHDPRVTVRYIWEKDGATLGVESNPRIRLDRNGSLHISQTWSG 241

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRG 433
           D G YTCR  +        A L V+    AP +    +  ++ +   ++W    P     
Sbjct: 242 DIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWT--KPFDGNS 299

Query: 434 HFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
               Y ++  +E +   +I    V+  ++T+  V   VPA     R+ A N    G  S+
Sbjct: 300 PLLRYVLEM-SENNAPWTILLASVDP-KATSVTVKGLVPARSYQFRLCAVNDVGKGQFSK 357

Query: 494 IISFVTPEGVPGTVQSLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKV 549
               V+    P T      I  G +  +  ++W  P +   NG+L GY I++  + G  V
Sbjct: 358 DTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRWYCLAGLPV 417

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKN 604
           G    +   I+D    +  L  L   T Y I +A Y  AG G  S       L  VP   
Sbjct: 418 G---YQFKNITDADVNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVP 474

Query: 605 PDNVEGRGSTPNNLVISWTA 624
           P NV    +    +  +W A
Sbjct: 475 PGNVHAEATNSTTIRFTWNA 494



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 130/578 (22%), Positives = 217/578 (37%), Gaps = 49/578 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           K V++ C   G P P   W KD   V +    R  Q + G  L I  +   D G + C  
Sbjct: 3   KVVDIPCRAKGVPPPSITWYKDAAVVEVEKLARFRQRSDG-GLQISGLVPDDTGMFQCFA 61

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPI 166
            N  GE ++ +       AP  T  P      +  +V   C+ SG P P I W    + +
Sbjct: 62  RNAAGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERIL 121

Query: 167 SQAPPN-PR-RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           +      PR   +    + I     SD G Y C ATNS G       + V A    IT+ 
Sbjct: 122 ASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWART-RITKP 180

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDVAF 279
           P+D+  + G    + C V   P+  V +I  +   T G     R  +   G L I+    
Sbjct: 181 PQDQSVIKGTQASMVCGVSHDPRVTVRYIWEKDGATLGVESNPRIRLDRNGSLHISQTWS 240

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------EDYEVEAGQSATFRCNAV 332
            D G YTC   +  G    S  L V++  H  + P       E   +    +  F  N+ 
Sbjct: 241 GDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPFDGNS- 299

Query: 333 SDPSLKLSIVWLRGSEP---IDFESEPR--------FVQSNDYSLTVTKSSELDSGQYTC 381
             P L+  +     + P   +    +P+         V +  Y   +   +++  GQ++ 
Sbjct: 300 --PLLRYVLEMSENNAPWTILLASVDPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSK 357

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
             +        + +L  + P   P N       + +  ++ W P       G  +GY ++
Sbjct: 358 DTE--------RVSLPEEPPTAPPQNVIASGRTN-QSIMIQWQPPPESHQNGILKGYIIR 408

Query: 442 TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
            +         +   +   +     ++  +  +     V A+N A  G  S  ++  T +
Sbjct: 409 WYCLAGLPVGYQFKNITDADVNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQ 468

Query: 502 GV----PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK-IKYQSVKGTKVGPLLERL 556
           GV    PG V + EA    +  F      P+  NG+  GYK I ++  +  +V  +  R 
Sbjct: 469 GVPTVPPGNVHA-EATNSTTIRFTWNAPSPQFINGINQGYKLIAWEPEQEEEVTMVTAR- 526

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           P   D +     ++GL+  T+Y   +  +T  GDG  S
Sbjct: 527 PNFQD-SIHVGFVSGLKKFTEYFTSVLCFTTPGDGPRS 563



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 160/430 (37%), Gaps = 45/430 (10%)

Query: 234 KTVVLTCRVFGAPKPEVNWIHNQKEL---TGGRYTILETGDLKITDVAFADSGEYTCFAR 290
           K V + CR  G P P + W  +   +      R+     G L+I+ +   D+G + CFAR
Sbjct: 3   KVVDIPCRAKGVPPPSITWYKDAAVVEVEKLARFRQRSDGGLQISGLVPDDTGMFQCFAR 62

Query: 291 NKLGTAQGSGSLTVKE-HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEP 349
           N  G  Q S  L V     +IT  P D  V  G S    C     P  + +I W +G   
Sbjct: 63  NAAGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERI 120

Query: 350 IDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPL---EA 404
           +   S   PRF      SL ++ +   D+G YTC A       EA A L V       + 
Sbjct: 121 LASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKP 180

Query: 405 PSNFTLIQVIDAKKAV-VSWNP-VSPQSL---RGHFRGYKVQTWTEKDGEGSIRELIVNK 459
           P + ++I+   A     VS +P V+ + +    G   G +       D  GS+       
Sbjct: 181 PQDQSVIKGTQASMVCGVSHDPRVTVRYIWEKDGATLGVESNPRIRLDRNGSLHISQTWS 240

Query: 460 GESTTTEVDKFVPASKNFARV--LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS 517
           G+  T    + + A  N +R   L      + P   + +  T E                
Sbjct: 241 GDIGTYTC-RVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVE---------------R 284

Query: 518 SAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTK 577
            A  L W KP   N  L+ Y ++  S        LL  +    DP  TS  + GL P+  
Sbjct: 285 RAINLTWTKPFDGNSPLLRYVLE-MSENNAPWTILLASV----DPKATSVTVKGLVPARS 339

Query: 578 YRIHLAGYTKAGDGAESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHN 631
           Y+  L      G G  SK    V      P   P NV   G T  +++I W   PE   N
Sbjct: 340 YQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQN 399

Query: 632 APHFKYRIFW 641
                Y I W
Sbjct: 400 GILKGYIIRW 409



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N  ++    A +  V+W P    S  G  +GYK+  W  + G  + R   +  
Sbjct: 1301 VPTAAPRNV-VVHGATATQLDVTWEPPPLDSHNGDIQGYKIYFWEAQRGNLTERVKTLFL 1359

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E++  ++      +     V AFN A +GP S      T +  P    S++   L +++
Sbjct: 1360 AENSV-KLKNLTGYTAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSAPSSVKFSELTTTS 1418

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNG+L GY++ Y+
Sbjct: 1419 VNVSWEAPQFPNGILEGYRLVYE 1441



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 125/307 (40%), Gaps = 43/307 (14%)

Query: 414  IDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDK 469
            + A+  ++SW P    +SP       R Y +QT     G  ++    V+   S+   VD+
Sbjct: 1092 VRARSVLLSWEPGSDGLSP------VRYYTIQTRELPSGRWTLHSASVSHNASSFI-VDR 1144

Query: 470  FVPASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKW 524
              P +    RV A N   +   SE    +T     P+  P     L   P  +++  ++W
Sbjct: 1145 LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTI---LSVTPHTTTSVLIRW 1201

Query: 525  VKP--EQPNGVLMGYKIKYQSV--KGTKVGPL---------------LERLPYISDPTTT 565
              P  ++ NG+L+G++I+Y+ +  +G +   L               +  +  +S P+ T
Sbjct: 1202 QPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELTSMYSMRNLSRPSLT 1261

Query: 566  SAKLAGLEPSTKYRIHLAGYTKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVI 620
              +L  L    +Y I ++ Y   G+G  S  + +F    VP   P NV   G+T   L +
Sbjct: 1262 QYELDNLNKHRRYEIRMSVYNAVGEGPSSTPQEVFVGEAVPTAAPRNVVVHGATATQLDV 1321

Query: 621  SWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQ 680
            +W   P   HN     Y+I++     G    +   L   ++ + L N   +  Y + V  
Sbjct: 1322 TWEPPPLDSHNGDIQGYKIYFWEAQRGNLTERVKTLFLAENSVKLKNLTGYTAYMVSVAA 1381

Query: 681  TWTEKDG 687
                 DG
Sbjct: 1382 FNAAGDG 1388



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 9/198 (4%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ V      G   GYKV  + EKD +   R  +V  
Sbjct: 877  VPSSGPTNVSALATT-SSSMLVRWSEVPEADRNGLVLGYKV-IYKEKDSDAQPRFWLVEG 934

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 935  NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 994

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P + Y
Sbjct: 995  SVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVL----APSARQYTATGLKPESVY 1050

Query: 579  RIHLAGYTKA--GDGAES 594
               +   T+   GD AE+
Sbjct: 1051 LFRITAQTRKGWGDAAEA 1068



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 128/308 (41%), Gaps = 48/308 (15%)

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 637 LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGPPTNLGISN---------- 682

Query: 426 VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
           + P+S+   FR GY  +T    W  +   G + E    L++    N+ ++ + EV    P
Sbjct: 683 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNP 742

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
            +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 743 FTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTA---SETSLWLRWMPL 799

Query: 527 PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
           PE     N   +GYKIKY    G   G  L  +  + D       +  LE  T+YR+ + 
Sbjct: 800 PEMEYNGNPESVGYKIKYSRSDGH--GKTLSHV--VQDRVEREYTIEDLEEWTEYRVQVQ 855

Query: 584 GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
            +   G G  S+ +       VP   P NV    +T +++++ W+ +PE + N     Y+
Sbjct: 856 AFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYK 915

Query: 639 IFWRRHNT 646
           + ++  ++
Sbjct: 916 VIYKEKDS 923


>gi|440894049|gb|ELR46614.1| Neural cell adhesion molecule L1 [Bos grunniens mutus]
          Length = 1257

 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 138/474 (29%), Positives = 216/474 (45%), Gaps = 25/474 (5%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L + +V   D G Y 
Sbjct: 253 VALQGQPLILECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLNVGEEDDGEYR 311

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G  + ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 312 CLAENSLGSDR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 370

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + NL+ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 371 IPVEELGKDQKYRIHHGALVLSNLQPSDTMVTQCEARNRHGLLLANAYIYVVELPAKILT 430

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
              + Y  V G T  L C+ FGAP P V W+  + +  L   R+     G L I D+   
Sbjct: 431 PDNETYMAVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNGTLGIRDLQTN 490

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T I   P     + G    F C A  DPSL+ S
Sbjct: 491 DTGHYFCQAANDQSNVTIVANLQVKDATRIMQGPRSAIEKRGSRVMFTCQASFDPSLQHS 550

Query: 341 IVWLRGSEPIDFE----SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W R  + +D +    S+  F++  D  L +      D G Y+C A T+LD +E++A L
Sbjct: 551 TTWRR--DALDLQELGDSDKYFIE--DERLVIHSLDYSDQGNYSCVASTKLDVVESRAEL 606

Query: 397 TV-----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGS 451
            V      VP    S+  L++     +  +SW+P    +       Y ++   ++     
Sbjct: 607 LVVGSPGPVPQLELSDHHLLK---QSQVRLSWSPADDHN--APIEKYDIEFEDKEMAPEK 661

Query: 452 IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVP 504
              L    G  T+T + K  P      RV A N    G PS +  + VTPE  P
Sbjct: 662 WYSLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPDSETVVTPEAAP 714



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 152/572 (26%), Positives = 239/572 (41%), Gaps = 67/572 (11%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--NLRKSDTGN 194
           A + + +  EC A G P P I W+    P+    P  R     +  T++  N+ + D G 
Sbjct: 254 ALQGQPLILECIAEGFPTPTIKWLRPSGPM----PADRVTYQNHNKTLQLLNVGEEDDGE 309

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           Y C A NSLG      YV V A AP     P+      G+T  L C+V G P+PEV W  
Sbjct: 310 YRCLAENSLGSDRHAYYVTVEA-APYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRI 368

Query: 255 NQ---KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH-- 309
           N    +EL   +   +  G L ++++  +D+    C ARN+ G    +  + V E     
Sbjct: 369 NGIPVEELGKDQKYRIHHGALVLSNLQPSDTMVTQCEARNRHGLLLANAYIYVVELPAKI 428

Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
           +T   E Y    G +A   C A   P    S+ WL        + E RF    + +L + 
Sbjct: 429 LTPDNETYMAVQGSTAYLLCKAFGAPVP--SVQWLDREGKTVLQDE-RFFPYTNGTLGIR 485

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ----VIDAKKAVVSWNP 425
                D+G Y C+A  +      Q+ +T+   L+      ++Q     I+ + + V +  
Sbjct: 486 DLQTNDTGHYFCQAAND------QSNVTIVANLQVKDATRIMQGPRSAIEKRGSRVMF-- 537

Query: 426 VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNG 485
               + +  F      + T +     ++EL     +    E ++ V  S +++      G
Sbjct: 538 ----TCQASFDPSLQHSTTWRRDALDLQEL--GDSDKYFIEDERLVIHSLDYSD----QG 587

Query: 486 AYNGPPSEIISFVTPE------GVPGTVQSLEAIP---LGSSAFYLKWVKPEQPNGVLMG 536
            Y+   S  +  V         G PG V  LE      L  S   L W   +  N  +  
Sbjct: 588 NYSCVASTKLDVVESRAELLVVGSPGPVPQLELSDHHLLKQSQVRLSWSPADDHNAPIEK 647

Query: 537 YKIKYQSVKGTKVGP----LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 592
           Y I+++     ++ P     L ++P   + T+T+ KL+   P   Y   +    K G G 
Sbjct: 648 YDIEFED---KEMAPEKWYSLGKVP--GNQTSTTLKLS---PYVHYTFRVTAINKYGPGE 699

Query: 593 ESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
            S     V      P KNP +V+G G+  NN+VI+W  +  ++ NAP  +YR+ WR    
Sbjct: 700 PSPDSETVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRWMDWNAPQVQYRVQWRPQEM 759

Query: 647 GEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
             AW +  V D     LV++N  TF PYEIKV
Sbjct: 760 QGAWQEQIVSD---PFLVVSNTSTFVPYEIKV 788



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 146/591 (24%), Positives = 234/591 (39%), Gaps = 68/591 (11%)

Query: 44   VALRNKKVELFCIFGGTPLPQTIW-SKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
            +A++     L C   G P+P   W  ++G  +   +R      G +L I+ ++ +D G Y
Sbjct: 437  MAVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNG-TLGIRDLQTNDTGHY 495

Query: 103  TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP--EPEIHWV 160
             C+ +N      +   +L V  A      P          V F C+AS  P  +    W 
Sbjct: 496  FCQAANDQSNV-TIVANLQVKDATRIMQGPRSAIEKRGSRVMFTCQASFDPSLQHSTTWR 554

Query: 161  HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
             +   + +   + +  +   R+ I +L  SD GNY C A+  L  V     + V+     
Sbjct: 555  RDALDLQELGDSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDVVESRAELLVVGSPGP 614

Query: 221  ITEAP-KDEYTVDGKTVVLT---CRVFGAPKPEVNWIHNQKELTGGRYTILET--GDLKI 274
            + +    D + +    V L+        AP  + +     KE+   ++  L    G+   
Sbjct: 615  VPQLELSDHHLLKQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTS 674

Query: 275  TDVAFADSGEYT--CFARNKLGTAQGS--GSLTVKEHTHITDQPEDYEVEAGQSAT---- 326
            T +  +    YT    A NK G  + S      V         P D + E  ++      
Sbjct: 675  TTLKLSPYVHYTFRVTAINKYGPGEPSPDSETVVTPEAAPEKNPVDVKGEGNETNNMVIT 734

Query: 327  ---FRCNAVSDPSLKLSIVW----LRGSEPIDFESEPRFVQSNDYSL--------TVTKS 371
                R    + P ++  + W    ++G+      S+P  V SN  +         TV   
Sbjct: 735  WKPLRWMDWNAPQVQYRVQWRPQEMQGAWQEQIVSDPFLVVSNTSTFVPYEIKVQTVNSQ 794

Query: 372  SELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
             +    Q T     E D+ +A        PL  P     ++ +++   +V W  V P  +
Sbjct: 795  GKGPEPQITIGYSGE-DYPQAS-------PLLEP-----VKALNSSTVLVRWQSVDPAQV 841

Query: 432  RGHFRGYKVQTWTEKDGEGSIRE---LIVNKGE------STTTEVDKFVPASKNFARVLA 482
            +GH RGY V  W E    GS R+     V+KG       +T+T +    P S  +  V A
Sbjct: 842  KGHLRGYNVTYWWE----GSQRKHNKRHVHKGHVVVPANATSTILGGLRPYSSYWVEVQA 897

Query: 483  FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
            FNG   GP S + +F TPEGVPG  ++L       ++  L W  P   NGVL GY + YQ
Sbjct: 898  FNGRGLGPASGM-TFNTPEGVPGHPEALHLECQSDTSLLLHWQPPLSHNGVLTGYVLSYQ 956

Query: 543  SVK-GTKVGPLLERLPY-ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             +  G+K     E+L + + DP   +  L  L P  +YR  L   T+ G G
Sbjct: 957  PLNDGSK-----EQLSFDLPDPELRTHNLTNLSPRLRYRFQLQATTREGPG 1002



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 92/403 (22%), Positives = 168/403 (41%), Gaps = 36/403 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQ--------GNYGKSLIIK 92
           ++ V      V L C   G P  Q  W++DG+   P + +          G++  +    
Sbjct: 43  RRVVVFPTDDVSLKCEASGKPEVQFRWTRDGILFKPREELGMIVNQVPHSGSFSITGNSS 102

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
           +   S QG+Y C  SN +G A S+ I L     P +   TV+P  +   E E+V   C  
Sbjct: 103 NFAQSFQGTYRCFASNKLGTAMSHEIQLMAEGTPKWPKETVKP--VEVEEGESVILPCHP 160

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 161 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 218

Query: 205 YVYK---DVYV----NVLAHAPEI---TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K   D+ V    +++   P +   T +      + G+ ++L C   G P P + W+ 
Sbjct: 219 IIQKEPIDLRVKATNSMMDRKPHLLFPTNSSSHLVALQGQPLILECIAEGFPTPTIKWLR 278

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++ +V   D GEY C A N LG+ + +  +TV+   +   +
Sbjct: 279 PSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSDRHAYYVTVEAAPYWLHK 338

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++   + +  + +  +L ++    
Sbjct: 339 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELGKDQKYRIHHGALVLSNLQP 396

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP--LEAPSNFTLIQV 413
            D+    C A+     + A A +  V++P  +  P N T + V
Sbjct: 397 SDTMVTQCEARNRHGLLLANAYIYVVELPAKILTPDNETYMAV 439


>gi|190336629|gb|AAI62464.1| Neural adhesion molecule L1.2 [Danio rerio]
          Length = 1271

 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 123/395 (31%), Positives = 193/395 (48%), Gaps = 27/395 (6%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIW-SKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           + L  + +EL CI  G P P   W  KDGV      R ++ +  + L  +++  +D G Y
Sbjct: 267 LVLSGQNLELECIVQGLPSPSIQWIRKDGV--LSESRTTKDSNDRVLRFQNISETDGGEY 324

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C  +N  G + +++  ++V AAPY+  EP+    A  ETV  ECKA G+P+PE+ W  N
Sbjct: 325 QCTATNPQGMS-THTYRVTVEAAPYWIKEPKSQLYAPGETVKLECKADGIPKPEVTWSIN 383

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           G  +S   P+PRR V    +T++N+  SDT  + C A +  G V  + YV V+   P+I 
Sbjct: 384 GILLSDIDPDPRRSVKHGVLTLKNVELSDTAVFQCKAASKHGSVLINAYVYVIELPPQIL 443

Query: 223 EAPKDEYTV-DGKTVVLTCRVFGAPKPEVNW--------IHNQKELTGGRYTILETGDLK 273
                 Y+V +G+T  L C  FG+P+P V W        + NQ      R   L  G L+
Sbjct: 444 TEDGLMYSVAEGQTTELACETFGSPRPNVTWEGESWGALVANQ------RMIQLSDGSLQ 497

Query: 274 ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVS 333
           I++ +  DSG+YTC   N   T   +  L V   T I   P    ++ G+ AT  C    
Sbjct: 498 ISNASLNDSGQYTCTVNNSKITI--TAELDVLNKTVIVKPPLALRIQRGKPATLTCEYQV 555

Query: 334 DPSLKL-SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
           D    L  + W +  + +   S+      ++ +L + +  E D G YTC   T LD  +A
Sbjct: 556 DSRQDLPQVQWRKNMQKLTESSDSDKYMIDESTLIIPEVEEEDEGIYTCEVITTLDMAKA 615

Query: 393 QATLTVQVPLEAPSNFTLIQVIDAK--KAVVSWNP 425
             ++T+   ++ P   +LIQ+ + K  +  +SW P
Sbjct: 616 SGSITI---VDRPDPPSLIQMTEPKERRVTLSWTP 647



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 162/695 (23%), Positives = 270/695 (38%), Gaps = 98/695 (14%)

Query: 34  KQQYVTRKKEVALRNKKVELFC-IFGGTPLPQTIW-SKDGVPINPSDRISQGNYGKSLII 91
           K++ +T+K E     + V L C    GT  P   W  K    I  ++R+ QG  G +L  
Sbjct: 153 KEKIITKKVE---EGESVVLPCNPPNGTVAPVIHWMDKKLRHIQQNERVIQGRDG-NLYF 208

Query: 92  KHVEFSD-QGSYTCEV----SNGVGEAKSYSIDLSVLAAPYFTVEPEFIN---------A 137
            H   +D +  YTC +    +  +   +   + +S   +      P+ +           
Sbjct: 209 SHATVADSRDDYTCNIQFPSARVIKLKEPIKLTVSSSNSVVRNRRPQMMRPTGSSSSYLV 268

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
              + +  EC   GLP P I W+     +S++     +      +  +N+ ++D G Y C
Sbjct: 269 LSGQNLELECIVQGLPSPSIQWIRKDGVLSES--RTTKDSNDRVLRFQNISETDGGEYQC 326

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK 257
            ATN  G       V V A AP   + PK +    G+TV L C+  G PKPEV W  N  
Sbjct: 327 TATNPQGMSTHTYRVTVEA-APYWIKEPKSQLYAPGETVKLECKADGIPKPEVTWSINGI 385

Query: 258 ELTG----GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
            L+      R ++ + G L + +V  +D+  + C A +K       GS+ +  + ++ + 
Sbjct: 386 LLSDIDPDPRRSV-KHGVLTLKNVELSDTAVFQCKAASK------HGSVLINAYVYVIEL 438

Query: 314 P-----ED---YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           P     ED   Y V  GQ+    C     P  + ++ W  G       +  R +Q +D S
Sbjct: 439 PPQILTEDGLMYSVAEGQTTELACETFGSP--RPNVTW-EGESWGALVANQRMIQLSDGS 495

Query: 366 LTVTKSSELDSGQYTCRAQ-------TELDFIEAQATLTVQVPLE------APSNFTLIQ 412
           L ++ +S  DSGQYTC           ELD +    T+ V+ PL        P+  T   
Sbjct: 496 LQISNASLNDSGQYTCTVNNSKITITAELDVL--NKTVIVKPPLALRIQRGKPATLTCEY 553

Query: 413 VIDAKKAV--VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKF 470
            +D+++ +  V W                +Q  TE        + ++++      EV++ 
Sbjct: 554 QVDSRQDLPQVQWR-------------KNMQKLTESSDSD---KYMIDESTLIIPEVEEE 597

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
                    +   + A     S  I+ V     P  +Q  E          L W      
Sbjct: 598 DEGIYTCEVITTLDMAK---ASGSITIVDRPDPPSLIQMTEP---KERRVTLSWTPGADH 651

Query: 531 NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGD 590
           N  ++ Y I+++     +     E L  +S  ++  A L  L+P   YR  +    + G 
Sbjct: 652 NSPVLEYLIEFEETGSDRKE--WEELSRVSG-SSQRATLP-LKPFISYRFRVISINEIGK 707

Query: 591 GAESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR- 643
              S            P  NP+ V      P  LVI+W  M     N P F Y++ WR+ 
Sbjct: 708 SDPSMVTEAYSTPAAPPDSNPEGVRSDSDEPGTLVITWKEMDRRSFNGPDFHYKVMWRKV 767

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
             +G +W+  D+        V+ +   F  ++IKV
Sbjct: 768 LGSGPSWHTKDIT---SPPFVVTDVGNFSAFDIKV 799



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 136/288 (47%), Gaps = 22/288 (7%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIRELIVNK 459
            PLEAP +  LI +I++    V+W  V+ +++RG  +GYK+  T+    G+   RE     
Sbjct: 823  PLEAPLDVGLI-LINSTAIKVTWAAVNRETVRGRLQGYKIYLTYLGPKGQHLRREPKTTF 881

Query: 460  GESTTTEVDKFV-----PASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
              +T +  +K V     P S     V  FN    GP SE I F TPEGVPG   SL    
Sbjct: 882  VVTTDSNEEKKVLGDLQPFSHYNLAVSVFNYKGEGPQSESILFFTPEGVPGPPSSLMLDS 941

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
               +   + W  P QPNG L+GY +++Q +        L ++  ISDPT +  KL  L+P
Sbjct: 942  PSETEMTVHWTPPNQPNGNLIGYILQHQQLDNDAS---LMQVVKISDPTASHYKLK-LDP 997

Query: 575  STKYRIHLAGYTKAGDGA---ESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHN 631
             ++YR +L GYT  G+G    +       P    D     G T  NL  +W +  E + N
Sbjct: 998  HSRYRFYLRGYTAIGEGLPIIKDGATTLDPVPPSDISISTGETSVNL--TWVSK-ERQRN 1054

Query: 632  APHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN-QPTFQPYEIKV 678
               F   I + R +  + W + + ++  QS   L   QP  Q Y +K+
Sbjct: 1055 VEFF---IHYLRKDGPDKWEKSEKVNSTQSFYTLHGLQPGSQ-YRLKI 1098



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 143/362 (39%), Gaps = 33/362 (9%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSD----RISQGNYGKSLIIKHVEFSD-QGSYTCE 105
           + L C   G P P   W KDGV  +PS      +S+ +   SL  K       QG Y C 
Sbjct: 69  ITLTCDATGNPPPTFRWVKDGVEFDPSKDPDLSVSRDSGTFSLTAKDGPIHQYQGRYNCY 128

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEE-ETVTFECK-ASGLPEPEIHWVHNG 163
            SN +G A S    +     P    E       EE E+V   C   +G   P IHW+   
Sbjct: 129 ASNELGTAVSNEARIVTENTPTLQKEKIITKKVEEGESVVLPCNPPNGTVAPVIHWMD-- 186

Query: 164 KPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNATNSLGYVYK------------- 208
           K +     N R   G +  +   +   +D+  +Y CN       V K             
Sbjct: 187 KKLRHIQQNERVIQGRDGNLYFSHATVADSRDDYTCNIQFPSARVIKLKEPIKLTVSSSN 246

Query: 209 DVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE 268
            V  N        T +      + G+ + L C V G P P + WI     L+  R T  +
Sbjct: 247 SVVRNRRPQMMRPTGSSSSYLVLSGQNLELECIVQGLPSPSIQWIRKDGVLSESR-TTKD 305

Query: 269 TGD--LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
           + D  L+  +++  D GEY C A N  G +  +  +TV+   +   +P+      G++  
Sbjct: 306 SNDRVLRFQNISETDGGEYQCTATNPQGMSTHTYRVTVEAAPYWIKEPKSQLYAPGETVK 365

Query: 327 FRCNAVSDPSLKLSIVW-LRGSEPIDFESEPRFVQSNDYSLTVTKSSEL-DSGQYTCRAQ 384
             C A   P  K  + W + G    D + +PR  +S  + +   K+ EL D+  + C+A 
Sbjct: 366 LECKADGIP--KPEVTWSINGILLSDIDPDPR--RSVKHGVLTLKNVELSDTAVFQCKAA 421

Query: 385 TE 386
           ++
Sbjct: 422 SK 423



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 120/306 (39%), Gaps = 35/306 (11%)

Query: 124 AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           + P  T +P+ +     + +T  C A+G P P   WV +G     +  +P   V  +  T
Sbjct: 50  SPPVITAQPKSVTTFSADDITLTCDATGNPPPTFRWVKDGVEFDPS-KDPDLSVSRDSGT 108

Query: 184 IENLRKSD-----TGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEAPKDEYTVDGKTVV 237
                K        G Y C A+N LG    +    V  + P +  E    +   +G++VV
Sbjct: 109 FSLTAKDGPIHQYQGRYNCYASNELGTAVSNEARIVTENTPTLQKEKIITKKVEEGESVV 168

Query: 238 LTCR-VFGAPKPEVNWIHNQKELTGGRYTILE--TGDLKITDVAFADS-GEYTC---FAR 290
           L C    G   P ++W+  +         +++   G+L  +    ADS  +YTC   F  
Sbjct: 169 LPCNPPNGTVAPVIHWMDKKLRHIQQNERVIQGRDGNLYFSHATVADSRDDYTCNIQFPS 228

Query: 291 NKLGTAQGSGSLTVKEHTHI-----------TDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
            ++   +    LTV     +           T     Y V +GQ+    C     PS   
Sbjct: 229 ARVIKLKEPIKLTVSSSNSVVRNRRPQMMRPTGSSSSYLVLSGQNLELECIVQGLPS--P 286

Query: 340 SIVWLRGSEPIDFESEPRFVQ-SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           SI W+R    +   SE R  + SND  L     SE D G+Y C A       +  +T T 
Sbjct: 287 SIQWIRKDGVL---SESRTTKDSNDRVLRFQNISETDGGEYQCTATNP----QGMSTHTY 339

Query: 399 QVPLEA 404
           +V +EA
Sbjct: 340 RVTVEA 345



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 83/198 (41%), Gaps = 17/198 (8%)

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK 257
           N T ++   YK   +  L   P IT  PK   T     + LTC   G P P   W+ +  
Sbjct: 34  NTTINIPSRYK---IRDLKSPPVITAQPKSVTTFSADDITLTCDATGNPPPTFRWVKDGV 90

Query: 258 ELTGGRYTIL----ETGDLKITDV---AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
           E    +   L    ++G   +T          G Y C+A N+LGTA  + +  V E+T  
Sbjct: 91  EFDPSKDPDLSVSRDSGTFSLTAKDGPIHQYQGRYNCYASNELGTAVSNEARIVTENTP- 149

Query: 311 TDQPEDY---EVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
           T Q E     +VE G+S    CN   + ++   I W+   +    +   R +Q  D +L 
Sbjct: 150 TLQKEKIITKKVEEGESVVLPCNP-PNGTVAPVIHWM-DKKLRHIQQNERVIQGRDGNLY 207

Query: 368 VTKSSELDS-GQYTCRAQ 384
            + ++  DS   YTC  Q
Sbjct: 208 FSHATVADSRDDYTCNIQ 225


>gi|74209635|dbj|BAE23567.1| unnamed protein product [Mus musculus]
          Length = 893

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 159/609 (26%), Positives = 255/609 (41%), Gaps = 45/609 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           A +   V++ C   G P+P   W K    I    R+ +      L I +++  D G Y C
Sbjct: 106 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRKSQ--AVLEIPNLQLDDAGIYGC 163

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N  G+  S+   L +   P++  +           + +ECKA+G P P   W+ NG 
Sbjct: 164 TAENSRGK-NSFRGQLQIFTYPHWVQKLNDTQLDSGSPLQWECKATGKPRPTYRWLKNGA 222

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--EIT 222
           P+    P  R       + I+++ +SD G Y C A N  G +Y    + +LA  P  E+ 
Sbjct: 223 PLL---PQSRVDTVNGILAIQSVNQSDAGMYQCLAENKYGAIYASAELKILASPPSFELN 279

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFAD 281
           +  K       + V++ C   G+PKP ++W    K +    R  IL  G L+I + + AD
Sbjct: 280 QVKKSIIVTKDRGVLIECEPQGSPKPAISWRKGDKAVRANKRIAILPDGSLRILNASKAD 339

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+Y C   N  G+A+   SL+VKE T I   P+  E+  G+S    C A+ D SL ++ 
Sbjct: 340 EGKYICQGVNIFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 399

Query: 342 VWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W    +PIDF  E         Q++   L +     + +G+Y CR QT  D +  +A L
Sbjct: 400 YWTLKGQPIDFGKEGGHFENIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAEL 459

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKDGE 449
            V+ P   P    +++ I    A +SW+P +          Y +Q        W      
Sbjct: 460 LVRGP-PGPPGVVIVEEITESTATLSWSPATDN--HSPISSYNLQARSPFSLGWQTVK-- 514

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQ 508
            ++ E+I    ES    VD   P  +   RV+A N    G PS     + T E VP T  
Sbjct: 515 -TVPEVITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSIPSRMIRTNEAVPKTAP 571

Query: 509 SLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISDPT 563
           S  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+ +
Sbjct: 572 SNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSEAS 626

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNL 618
               +   + P T + + +  Y   GDG  S+ +        P   P +V     + + +
Sbjct: 627 KFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPTAAPTDVTATSVSVSEI 686

Query: 619 VISWTAMPE 627
            + W  + E
Sbjct: 687 FVVWKHVKE 695



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 162/677 (23%), Positives = 244/677 (36%), Gaps = 105/677 (15%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + A
Sbjct: 47  NLYISKVQTSDVGSYICLVKNAVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 106

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I NL+  D G YG
Sbjct: 107 AKGTTVKMECFALGNPVPTITWMKVNG----YIPSKSRLRKSQAVLEIPNLQLDDAGIYG 162

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + +  + P   +   D     G  +   C+  G P+P   W+ N 
Sbjct: 163 CTAENSRGKNSFRGQLQIFTY-PHWVQKLNDTQLDSGSPLQWECKATGKPRPTYRWLKNG 221

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
             L          G L I  V  +D+G Y C A NK G    S  L       I   P  
Sbjct: 222 APLLPQSRVDTVNGILAIQSVNQSDAGMYQCLAENKYGAIYASAEL------KILASPPS 275

Query: 317 YE---------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
           +E         V   +     C     P  K +I W +G + +   +  R     D SL 
Sbjct: 276 FELNQVKKSIIVTKDRGVLIECEPQGSP--KPAISWRKGDKAV--RANKRIAILPDGSLR 331

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVS 427
           +  +S+ D G+Y C+        E  A+L+V+ P          ++   +  V++   + 
Sbjct: 332 ILNASKADEGKYICQGVNIFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIH 391

Query: 428 PQSLR------------------GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDK 469
             SL                   GHF   + Q       +  IR +++         V  
Sbjct: 392 DASLDVTFYWTLKGQPIDFGKEGGHFENIRAQA---SSADLMIRNILLMHAGRYGCRVQT 448

Query: 470 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQ 529
              +  + A +L       GPP          G PG V   E   +  S   L W     
Sbjct: 449 TADSVSDEAELLV-----RGPP----------GPPGVVIVEE---ITESTATLSWSPATD 490

Query: 530 PNGVLMGYKIK--------YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIH 581
            +  +  Y ++        +Q+VK          +P +      SA    L P  +Y   
Sbjct: 491 NHSPISSYNLQARSPFSLGWQTVK---------TVPEVITGDMESAMAVDLNPWVEYEFR 541

Query: 582 LAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHF 635
           +      G G  S      +    VP   P NV GR    + LVI+W  + E   N   F
Sbjct: 542 VVATNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSGRSGRRHELVIAWEPVSEEFQNGEGF 601

Query: 636 KYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRE 693
            Y + +R + T   W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +
Sbjct: 602 GYIVAFRPNGT-RGWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQ 658

Query: 694 LIV---NKGESTTTEVD 707
           ++V    +GE T    D
Sbjct: 659 IVVICSAEGEPTAAPTD 675



 Score = 47.8 bits (112), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           +K  +  +++ V + C   G+P P   W K    +  + RI+    G SL I +   +D+
Sbjct: 282 KKSIIVTKDRGVLIECEPQGSPKPAISWRKGDKAVRANKRIAILPDG-SLRILNASKADE 340

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEI 157
           G Y C+  N  G A+  +  LSV       + P+       E++   CKA      +   
Sbjct: 341 GKYICQGVNIFGSAEIIA-SLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 399

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W   G+PI          N R +     + I N+     G YGC
Sbjct: 400 YWTLKGQPIDFGKEGGHFENIRAQASSADLMIRNILLMHAGRYGC 444



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 23/203 (11%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P  AP++ T   V    +  V W  V  +SL G  +G+++  W + + E S+ E    +G
Sbjct: 669 PTAAPTDVTATSV-SVSEIFVVWKHVK-ESL-GRPQGFEISYWKDTEPEDSV-ETARTRG 724

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT----PEGVPGTVQSLEAIPLG 516
             +   +      +     V A+NGA  GPPS   S  T    P   PG ++  +     
Sbjct: 725 NESFVMLTGLEGNTLYHLTVRAYNGAGYGPPSREASTTTKRHPPREPPGNLRWEQQ---- 780

Query: 517 SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
            S   L W  V+P      +MGYK+ Y+  +G   G ++E        T     +  L  
Sbjct: 781 GSQVSLGWEPVRPLANESEVMGYKVFYRQ-EGHSEGQVIE--------TQKPQAVVPLPE 831

Query: 575 STKYRIHLAGYTKAGDGAESKYL 597
           +  Y I +  Y++ GDG  S  +
Sbjct: 832 AGVYIIEVRAYSEGGDGTASSQI 854


>gi|148223930|ref|NP_001081205.1| contactin A precursor [Xenopus laevis]
 gi|3219157|dbj|BAA28780.1| contactin A [Xenopus laevis]
 gi|213623272|gb|AAI69517.1| Contactin A [Xenopus laevis]
          Length = 1009

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 196/748 (26%), Positives = 314/748 (41%), Gaps = 105/748 (14%)

Query: 22  TGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS 81
           T  S    R+ P    V  K   AL+++ V L C   G P+P   W K    +  S  IS
Sbjct: 217 TDTSEKPKRYTPVIN-VKFKDTRALKDQNVTLECFALGNPVPVITWRKINEAMPASAEIS 275

Query: 82  QGNYGKSLIIKHVEFSDQGSYTCEVSN--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAE 139
               G  L I +++  D+G+Y CE  N  G+   ++Y   + V   P +    E IN  E
Sbjct: 276 MS--GAVLKIFNIQPEDEGTYECEAKNIKGLDTHRAY---VYVEGVPEWV---EHINDTE 327

Query: 140 EET---VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
            +    + + C   G P+P I W+ NG              G   +    L   D G Y 
Sbjct: 328 RDIGSDLHWSCVVKGKPQPSIRWLKNGA-----------SYGKGELRKSGLTLDDAGIYQ 376

Query: 197 CNATNSLGYVYKDVYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           C A N  G +Y +  + +LA AP  E T   K      G  V++ C+   APK + +W  
Sbjct: 377 CIAENMHGIIYANAELKILALAPTFEFTPMRKKVLAAKGGRVIIECKPKAAPKAKFSWSK 436

Query: 255 NQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
             + L    R +I + G L+I ++   D G YTC+A N  G A G+  L+V   T IT  
Sbjct: 437 GTELLINNSRVSIWDDGSLEILNITKLDEGSYTCYAENDRGKANGTAVLSVTAATKITLA 496

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF--------VQSNDYS 365
           P + +V  G++AT +CNA  DP+L LS +W     PI+F+ E R         +Q++  S
Sbjct: 497 PSNADVTVGENATMQCNASHDPTLDLSYIWSLNGFPIEFDMEDRHYERAIRLPLQNDVGS 556

Query: 366 LTVTKSSELD-SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWN 424
             + K+++L  +G+YTC AQT +D   A A L V+ P   P    + ++ D     ++W+
Sbjct: 557 ELIIKNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGIRVEELRDT-SVKLTWS 615

Query: 425 -------PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 477
                  P+S  +++   R      W +   E    E     G      V   +P     
Sbjct: 616 SGTDNHQPISKYNIQA--RNILSDDWKDVKTENPNIE-----GYMEMARVIDLIPWMDYE 668

Query: 478 ARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSS--AFYLKW--VKPEQPNGV 533
            RV+A N    G PS     +  EG    V   E    G S     + W  +  E   G 
Sbjct: 669 FRVIATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGSNRELTVTWQPLSREYHYGD 728

Query: 534 LMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS--AKLAGLEPSTKYRIHLAGYTKAGDG 591
             GY + ++     +   ++     +S+P +     K   + P+T+++I +  + K G+G
Sbjct: 729 GFGYGVAFKPFNVREWRKVI-----VSNPESGHYVHKDDTITPATQFQIKVKAFNKVGEG 783

Query: 592 AESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWN 651
             S                      + V+ ++A  ++   AP            T   +N
Sbjct: 784 PYS----------------------STVVVYSA-EDVPTEAP------------TAVVYN 808

Query: 652 QDDVLDWRQSELVLANQPTFQ-PYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFV 710
              +L    +E+ +A  P ++   E   V+ W  +D E +   + V K    TT ++  +
Sbjct: 809 ---ILS--STEVSVAWHPVYEKSIEGYQVRYWRIQDKEAAAHRVQV-KAADITTRLEGLM 862

Query: 711 PASKNFARVLAFNGAYNGPPSEIISFVT 738
           P +     V AFN A +GPPS  ++F+T
Sbjct: 863 PNTHYNLEVRAFNSAGDGPPSRTLTFLT 890



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 140/338 (41%), Gaps = 35/338 (10%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA-----------APYFTVEPEFIN 136
           +L I  VE +D+G+Y+C VS+       +S  +S+L             P   V+ +   
Sbjct: 179 NLYIAKVEQTDRGNYSCFVSSPSVTKSVFSKFISLLPQTDTSEKPKRYTPVINVKFKDTR 238

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQA-PPNPRRKVGPNRITIENLRKSDTGNY 195
           A +++ VT EC A G P P I W    + I++A P +    +    + I N++  D G Y
Sbjct: 239 ALKDQNVTLECFALGNPVPVITW----RKINEAMPASAEISMSGAVLKIFNIQPEDEGTY 294

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            C A N  G      YV V    PE  E   D     G  +  +C V G P+P + W+ N
Sbjct: 295 ECEAKNIKGLDTHRAYVYVEG-VPEWVEHINDTERDIGSDLHWSCVVKGKPQPSIRWLKN 353

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITD 312
                G  Y     G+L+ + +   D+G Y C A N  G    +  L +         T 
Sbjct: 354 -----GASYG---KGELRKSGLTLDDAGIYQCIAENMHGIIYANAELKILALAPTFEFTP 405

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
             +      G      C   + P  K S  W +G+E +   S  R    +D SL +   +
Sbjct: 406 MRKKVLAAKGGRVIIECKPKAAPKAKFS--WSKGTELLINNS--RVSIWDDGSLEILNIT 461

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSN 407
           +LD G YTC A+ +       A L+V    +   APSN
Sbjct: 462 KLDEGSYTCYAENDRGKANGTAVLSVTAATKITLAPSN 499



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 142/645 (22%), Positives = 260/645 (40%), Gaps = 102/645 (15%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH-VEFSDQGSYTCEVSNGVGEA 113
           C+  G P P   W K+G            +YGK  + K  +   D G Y C   N  G  
Sbjct: 338 CVVKGKPQPSIRWLKNG-----------ASYGKGELRKSGLTLDDAGIYQCIAENMHGII 386

Query: 114 KSYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAP 170
            + + +L +LA AP F   P  + + AA+   V  ECK    P+ +  W    + +    
Sbjct: 387 YA-NAELKILALAPTFEFTPMRKKVLAAKGGRVIIECKPKAAPKAKFSWSKGTELLIN-- 443

Query: 171 PNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
            N R  +  +  + I N+ K D G+Y C A N  G       ++V A A +IT AP +  
Sbjct: 444 -NSRVSIWDDGSLEILNITKLDEGSYTCYAENDRGKANGTAVLSVTA-ATKITLAPSNAD 501

Query: 230 TVDGKTVVLTCRVFGAPKPEVNWI---------HNQKELTGGRYTILET-----GDLKIT 275
              G+   + C     P  ++++I          + ++    R   L        +L I 
Sbjct: 502 VTVGENATMQCNASHDPTLDLSYIWSLNGFPIEFDMEDRHYERAIRLPLQNDVGSELIIK 561

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           +     +G YTC A+  +  +  S  L V+                      R   + D 
Sbjct: 562 NAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPG-------------PPGGIRVEELRDT 608

Query: 336 SLKLSIVWLRGS---EPID-FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           S+KL+  W  G+   +PI  +  + R + S+D+    T++  ++      R    + +++
Sbjct: 609 SVKLT--WSSGTDNHQPISKYNIQARNILSDDWKDVKTENPNIEGYMEMARVIDLIPWMD 666

Query: 392 ------AQATLTVQVP-LEAPSNFT-----LIQVIDA-------KKAVVSWNPVSPQSLR 432
                 A  TL V  P L +P   T     ++   +        ++  V+W P+S +   
Sbjct: 667 YEFRVIATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGSNRELTVTWQPLSREYHY 726

Query: 433 GH-------FRGYKVQTWTEKDGEGSIRELIVNKGES--TTTEVDKFVPASKNFARVLAF 483
           G        F+ + V+ W         R++IV+  ES     + D   PA++   +V AF
Sbjct: 727 GDGFGYGVAFKPFNVREW---------RKVIVSNPESGHYVHKDDTITPATQFQIKVKAF 777

Query: 484 NGAYNGPPSEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
           N    GP S  +   + E VP    +      L S+   + W    + +  + GY+++Y 
Sbjct: 778 NKVGEGPYSSTVVVYSAEDVPTEAPTAVVYNILSSTEVSVAWHPVYEKS--IEGYQVRYW 835

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF 602
            ++  +      R+   +   TT  +L GL P+T Y + +  +  AGDG  S+ L ++  
Sbjct: 836 RIQDKEAAA--HRVQVKAADITT--RLEGLMPNTHYNLEVRAFNSAGDGPPSRTLTFLTR 891

Query: 603 KNPDNVEGRGSTP----NNLVISWTAMPEIEHNAPHFKYRIFWRR 643
           K P + + + ++     +  +I+W  +  + + +    Y++ +R+
Sbjct: 892 KAPPSQKPQITSAVRYGSQYIITWEHVAHLSNESAVNGYKVLYRQ 936



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/376 (22%), Positives = 131/376 (34%), Gaps = 46/376 (12%)

Query: 47  RNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           R  KV + C     P P   W K+   I+  +       G  +I    ++ D   Y C V
Sbjct: 41  REGKVSVNCRARANPPPIYKWRKNNWEIDFLNEHYSLVGGNLVIHNPDKYKDSARYVCIV 100

Query: 107 SNGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI------HW 159
           SN  G+  S    L+     P+ T E   +   E       C     P P         W
Sbjct: 101 SNMYGKVWSREATLNFGYLDPFPTEERYEVKVKEGTGAVLICD----PPPHFPDDLNYRW 156

Query: 160 VHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           + N  P+  +  N R     N  + I  + ++D GNY C  ++    V K V+   ++  
Sbjct: 157 LLNEFPVFISTDNRRFVTQTNGNLYIAKVEQTDRGNYSCFVSSP--SVTKSVFSKFISLL 214

Query: 219 PE--ITEAP-----------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           P+   +E P           KD   +  + V L C   G P P + W    + +      
Sbjct: 215 PQTDTSEKPKRYTPVINVKFKDTRALKDQNVTLECFALGNPVPVITWRKINEAMPASAEI 274

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
            +    LKI ++   D G Y C A+N  G       + V+      +   D E + G   
Sbjct: 275 SMSGAVLKIFNIQPEDEGTYECEAKNIKGLDTHRAYVYVEGVPEWVEHINDTERDIGSDL 334

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL---DSGQYTCR 382
            + C     P  + SI WL+                  Y     + S L   D+G Y C 
Sbjct: 335 HWSCVVKGKP--QPSIRWLKNGA--------------SYGKGELRKSGLTLDDAGIYQCI 378

Query: 383 AQTELDFIEAQATLTV 398
           A+     I A A L +
Sbjct: 379 AENMHGIIYANAELKI 394



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 19/196 (9%)

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
           VP EAP+   +  ++ + +  V+W+PV  +S+ G    Y+V+ W  +D E +   + V K
Sbjct: 797 VPTEAPTA-VVYNILSSTEVSVAWHPVYEKSIEG----YQVRYWRIQDKEAAAHRVQV-K 850

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
               TT ++  +P +     V AFN A +GPPS  ++F+T +  P     + +     S 
Sbjct: 851 AADITTRLEGLMPNTHYNLEVRAFNSAGDGPPSRTLTFLTRKAPPSQKPQITSAVRYGSQ 910

Query: 520 FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPST- 576
           + + W  V        + GYK+ Y+   G + G L          TT    +    P   
Sbjct: 911 YIITWEHVAHLSNESAVNGYKVLYRQ-DGQRDGKLY---------TTPKHSVELPVPEEG 960

Query: 577 KYRIHLAGYTKAGDGA 592
           +Y + +  +++ GDGA
Sbjct: 961 EYVVEVRAHSEGGDGA 976



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 108/282 (38%), Gaps = 36/282 (12%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   I     +    VG N +   
Sbjct: 31  PIDTIFPE---ESREGKVSVNCRARANPPPIYKWRKNNWEIDFLNEH-YSLVGGNLVIHN 86

Query: 186 NLRKSDTGNYGCNATNSLGYVY-KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFG 244
             +  D+  Y C  +N  G V+ ++  +N     P  TE   +    +G   VL C    
Sbjct: 87  PDKYKDSARYVCIVSNMYGKVWSREATLNFGYLDPFPTEERYEVKVKEGTGAVLICD--- 143

Query: 245 APKPEV------NWIHNQKEL---TGGRYTILET-GDLKITDVAFADSGEYTCFARN-KL 293
            P P         W+ N+  +   T  R  + +T G+L I  V   D G Y+CF  +  +
Sbjct: 144 -PPPHFPDDLNYRWLLNEFPVFISTDNRRFVTQTNGNLYIAKVEQTDRGNYSCFVSSPSV 202

Query: 294 GTAQGSGSLTVKEHTHITDQPEDY-----------EVEAGQSATFRCNAVSDPSLKLSIV 342
             +  S  +++   T  +++P+ Y                Q+ T  C A+ +P     I 
Sbjct: 203 TKSVFSKFISLLPQTDTSEKPKRYTPVINVKFKDTRALKDQNVTLECFALGNPV--PVIT 260

Query: 343 WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           W + +E +   +E   +  +   L +      D G Y C A+
Sbjct: 261 WRKINEAMPASAE---ISMSGAVLKIFNIQPEDEGTYECEAK 299


>gi|395516504|ref|XP_003762427.1| PREDICTED: contactin-6 [Sarcophilus harrisii]
          Length = 1017

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 192/717 (26%), Positives = 304/717 (42%), Gaps = 80/717 (11%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+P   W + DG P+  + +I       ++ I + +  D+GSY 
Sbjct: 228 AAKGSTVKLECFALGNPVPNISWRRLDGSPL--ARKIEYSKSKGTIGIPNFQQEDEGSYE 285

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G   +    L + A P +  + +  + +  + + +EC+ASG P P   W+ NG
Sbjct: 286 CIAGNLRGRNIARG-QLFLYAPPEWDKKIQTTDLSIYDPLFWECRASGKPIPSYVWLKNG 344

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           +PI    P  R ++    + I  L  SD+G Y C A N    +Y +  + V A AP+ ++
Sbjct: 345 EPIV---PEERIQIENGSLVITMLNVSDSGFYQCVAENKYQTIYANAELRVRASAPDFSK 401

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
            P  + +V   G  VV+ C+   +P+  ++W    + +    R+ ILE G LKI +V   
Sbjct: 402 NPMQKISVVQVGGDVVIECKPKASPRAMISWAKGSEMIRQSKRFFILEDGSLKIYNVTKL 461

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A+ SG+L +KE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 462 DAGTYTCIAMNQFGIAKTSGNLVIKERTIITVPPPQMDVTVGESIVLPCQVFHDPSIEVV 521

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELD---SGQYTCRAQTELDFIEAQATL 396
             W      IDF+   P F +    S+      E+    SG+Y C  +T LD + A A +
Sbjct: 522 FTWYLNGNVIDFQRGVPHFERIGGESVGDLMIREIQLNHSGKYVCMVETTLDNLSAVADI 581

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD----GEGSI 452
            V+ P   PSN   I+ I +  + + W P    +     + Y +QT T          +I
Sbjct: 582 IVRGPPGPPSNVR-IENISSTTSQLCWRPGIDNN--SPIQIYTIQTRTPFSVGWLAVSTI 638

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLE 511
            E++   G+  T  V    P  +   RV+A N    G PS+    + T   VP    +  
Sbjct: 639 PEIL--NGKMHTATVVGLNPWVEYEFRVVAGNSIGIGEPSQPSKLLRTKAAVPVVAPTTI 696

Query: 512 AIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYIS--DPTTTS 566
               GS S   + W  +  E  NG   GY I ++      VG L      +S  + +   
Sbjct: 697 GGGGGSQSELVITWESIPEELQNGEGFGYIIMFR-----PVGSLTWTKASVSSVEASKYV 751

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNLVIS 621
            +   L P + + + +  Y   G+G  S           P   P     +  + + + IS
Sbjct: 752 YRNESLIPLSPFEVKVGVYNNEGEGTLSPATIVYSGEDEPQLAPTGASVQSFSASEVDIS 811

Query: 622 WTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQT 681
           W ++                       AWN       R +  VL        YE   V  
Sbjct: 812 WNSI-----------------------AWN-------RSTGRVLG-------YE---VLY 831

Query: 682 WTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           WTE   E S  ++ V+ G  TT  +      +  FA V A+N A  GP S++++  T
Sbjct: 832 WTEDSKETSSGKIRVS-GNITTKSITGLKANTLYFATVRAYNTAGTGPSSDLVNVTT 887



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 185/711 (26%), Positives = 273/711 (38%), Gaps = 88/711 (12%)

Query: 39  TRKKEVALRNKKVELFC----IFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV 94
           TR     L  + V L C     FG      T ++   +P+    R        +L I  V
Sbjct: 117 TRSTVSVLAGQGVVLLCGPPPFFGDVYYAWT-FNDHPLPVQEDSRRFISQETGNLYIAKV 175

Query: 95  EFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAAEEETVT 144
           E SD G+YTC V+N   + +       ++           P   V  PE + AA+  TV 
Sbjct: 176 EPSDVGNYTCFVTNMQAQKRIQGPPTPLVLRNDGVMGEYEPKIEVRFPETVQAAKGSTVK 235

Query: 145 FECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSL 203
            EC A G P P I W   +G P+++     + K     I I N ++ D G+Y C A N  
Sbjct: 236 LECFALGNPVPNISWRRLDGSPLARKIEYSKSK---GTIGIPNFQQEDEGSYECIAGNLR 292

Query: 204 GYVYKDVYVNVLAHAPEITEAPKDEYTVDGKT---VVLTCRVFGAPKPEVNWIHNQKELT 260
           G         +  +AP   E  K   T D      +   CR  G P P   W+ N + + 
Sbjct: 293 G--RNIARGQLFLYAPP--EWDKKIQTTDLSIYDPLFWECRASGKPIPSYVWLKNGEPIV 348

Query: 261 GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPED--Y 317
                 +E G L IT +  +DSG Y C A NK  T   +  L V+      +  P     
Sbjct: 349 PEERIQIENGSLVITMLNVSDSGFYQCVAENKYQTIYANAELRVRASAPDFSKNPMQKIS 408

Query: 318 EVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSG 377
            V+ G      C   + P   +S  W +GSE I      RF    D SL +   ++LD+G
Sbjct: 409 VVQVGGDVVIECKPKASPRAMIS--WAKGSEMI--RQSKRFFILEDGSLKIYNVTKLDAG 464

Query: 378 QYTCRAQTELDFIEAQATLTV-----------QVPLEAPSNFTL-IQVID--AKKAVVSW 423
            YTC A  +    +    L +           Q+ +    +  L  QV    + + V +W
Sbjct: 465 TYTCIAMNQFGIAKTSGNLVIKERTIITVPPPQMDVTVGESIVLPCQVFHDPSIEVVFTW 524

Query: 424 ----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR 479
               N +  Q    HF     +   E  G+  IRE+ +N        V+  +      A 
Sbjct: 525 YLNGNVIDFQRGVPHFE----RIGGESVGDLMIREIQLNHSGKYVCMVETTLDNLSAVAD 580

Query: 480 VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKI 539
           ++       GPP          G P  V+ +E I   S+   L W      N  +  Y I
Sbjct: 581 IIV-----RGPP----------GPPSNVR-IENI--SSTTSQLCWRPGIDNNSPIQIYTI 622

Query: 540 KYQSVKGTKVGPL-LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG---AESK 595
             Q+     VG L +  +P I +    +A + GL P  +Y   +      G G     SK
Sbjct: 623 --QTRTPFSVGWLAVSTIPEILNGKMHTATVVGLNPWVEYEFRVVAGNSIGIGEPSQPSK 680

Query: 596 YL---FYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
            L     VP   P  + G G + + LVI+W ++PE   N   F Y I +R   +   W +
Sbjct: 681 LLRTKAAVPVVAPTTIGGGGGSQSELVITWESIPEELQNGEGFGYIIMFRPVGS-LTWTK 739

Query: 653 DDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIR-ELIVNKGE 700
             V     S+ V  N+      P+E+KV       +GEG++    IV  GE
Sbjct: 740 ASVSSVEASKYVYRNESLIPLSPFEVKV--GVYNNEGEGTLSPATIVYSGE 788



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 152/642 (23%), Positives = 249/642 (38%), Gaps = 87/642 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P+P  +W K+G PI P +RI   N   SL+I  +  SD G Y C     V E K
Sbjct: 328 CRASGKPIPSYVWLKNGEPIVPEERIQIEN--GSLVITMLNVSDSGFYQC-----VAENK 380

Query: 115 SYSI----DLSVLA-APYFTVEP-EFINAAE-EETVTFECKASGLPEPEIHWVHNGKPIS 167
             +I    +L V A AP F+  P + I+  +    V  ECK    P   I W    + I 
Sbjct: 381 YQTIYANAELRVRASAPDFSKNPMQKISVVQVGGDVVIECKPKASPRAMISWAKGSEMIR 440

Query: 168 QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKD 227
           Q+      + G   + I N+ K D G Y C A N  G + K     V+     IT  P  
Sbjct: 441 QSKRFFILEDG--SLKIYNVTKLDAGTYTCIAMNQFG-IAKTSGNLVIKERTIITVPPPQ 497

Query: 228 EYTVDGKTVVLTCRVFGAPKPEV--------NWIHNQK-----ELTGGRYTILETGDLKI 274
                G+++VL C+VF  P  EV        N I  Q+     E  GG       GDL I
Sbjct: 498 MDVTVGESIVLPCQVFHDPSIEVVFTWYLNGNVIDFQRGVPHFERIGGE----SVGDLMI 553

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT----FRCN 330
            ++    SG+Y C     L        + V+        P +  +E   S T    +R  
Sbjct: 554 REIQLNHSGKYVCMVETTLDNLSAVADIIVRGPP---GPPSNVRIENISSTTSQLCWRPG 610

Query: 331 AVSDPSLKLSIVWLRGSEPIDF---ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
             ++  +++  +  R    + +    + P  +    ++ TV   +     ++   A   +
Sbjct: 611 IDNNSPIQIYTIQTRTPFSVGWLAVSTIPEILNGKMHTATVVGLNPWVEYEFRVVAGNSI 670

Query: 388 DFIE-AQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ- 441
              E +Q +  ++    VP+ AP+           + V++W  +  +   G   GY +  
Sbjct: 671 GIGEPSQPSKLLRTKAAVPVVAPTTIGGGGG-SQSELVITWESIPEELQNGEGFGYIIMF 729

Query: 442 ------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
                 TWT+           V + ES        +P S    +V  +N    G  S   
Sbjct: 730 RPVGSLTWTKASVSSVEASKYVYRNES-------LIPLSPFEVKVGVYNNEGEGTLSPAT 782

Query: 496 SFVTPEGVP------GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGT 547
              + E  P       +VQS  A  +  S   + W    +  G ++GY++ Y  +  K T
Sbjct: 783 IVYSGEDEPQLAPTGASVQSFSASEVDISWNSIAW---NRSTGRVLGYEVLYWTEDSKET 839

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PF 602
             G +      +S   TT + + GL+ +T Y   +  Y  AG G  S  +        P 
Sbjct: 840 SSGKI-----RVSGNITTKS-ITGLKANTLYFATVRAYNTAGTGPSSDLVNVTTKKSPPS 893

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           + P N+  +    + L ++W  +  +E+ +    Y+I +R++
Sbjct: 894 QAPSNIAWKLKN-SKLCLNWEHVKTMENESDVLGYKILYRQN 934



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 94/385 (24%), Positives = 138/385 (35%), Gaps = 52/385 (13%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH-VEFSDQGSYTC 104
           + + +V L C   G P+P   W ++G  I+ +        G SL I +  +    G+Y C
Sbjct: 30  MEHSEVILNCAANGYPIPNYRWKQNGTDIDFTMSYHYRLIGGSLAISNPYKAQAIGTYQC 89

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPEI-----H 158
             +N +G   S    L       F T     ++    + V   C     P P        
Sbjct: 90  LATNPLGTILSQKAKLQFAYIENFETKTRSTVSVLAGQGVVLLCG----PPPFFGDVYYA 145

Query: 159 WVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------- 205
           W  N  P+     + RR +      + I  +  SD GNY C  TN               
Sbjct: 146 WTFNDHPLP-VQEDSRRFISQETGNLYIAKVEPSDVGNYTCFVTNMQAQKRIQGPPTPLV 204

Query: 206 -----VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT 260
                V  +    +    PE  +A K      G TV L C   G P P ++W    + L 
Sbjct: 205 LRNDGVMGEYEPKIEVRFPETVQAAK------GSTVKLECFALGNPVPNISW----RRLD 254

Query: 261 GG------RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
           G        Y+    G + I +    D G Y C A N  G     G L +        + 
Sbjct: 255 GSPLARKIEYS-KSKGTIGIPNFQQEDEGSYECIAGNLRGRNIARGQLFLYAPPEWDKKI 313

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           +  ++       + C A   P    S VWL+  EPI  E     +Q  + SL +T  +  
Sbjct: 314 QTTDLSIYDPLFWECRASGKP--IPSYVWLKNGEPIVPEER---IQIENGSLVITMLNVS 368

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQ 399
           DSG Y C A+ +   I A A L V+
Sbjct: 369 DSGFYQCVAENKYQTIYANAELRVR 393



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 109/290 (37%), Gaps = 34/290 (11%)

Query: 119 DLSVLAAPYFTVEPEFINAA---EEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D  +L  P FT EP+ I  +   E   V   C A+G P P   W  NG  I        R
Sbjct: 8   DNDILQGPSFTQEPQDIMYSLNMEHSEVILNCAANGYPIPNYRWKQNGTDIDFTMSYHYR 67

Query: 176 KVGPNRITIENLRKSDT-GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            +G   + I N  K+   G Y C ATN LG +         A+        +   +V  G
Sbjct: 68  LIG-GSLAISNPYKAQAIGTYQCLATNPLGTILSQKAKLQFAYIENFETKTRSTVSVLAG 126

Query: 234 KTVVLTCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGE 284
           + VVL C     P P        W  N   L       R+   ETG+L I  V  +D G 
Sbjct: 127 QGVVLLC----GPPPFFGDVYYAWTFNDHPLPVQEDSRRFISQETGNLYIAKVEPSDVGN 182

Query: 285 YTCFARNKLGTA--QGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVS 333
           YTCF  N       QG  +  V  +  +  +         PE  +   G +    C A+ 
Sbjct: 183 YTCFVTNMQAQKRIQGPPTPLVLRNDGVMGEYEPKIEVRFPETVQAAKGSTVKLECFALG 242

Query: 334 DPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +P   +S   L GS P+  + E      +  ++ +    + D G Y C A
Sbjct: 243 NPVPNISWRRLDGS-PLARKIE---YSKSKGTIGIPNFQQEDEGSYECIA 288



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 15/200 (7%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P  AP+  + +Q   A +  +SWN ++     G   GY+V  WTE   E S  ++ V+ G
Sbjct: 791 PQLAPTGAS-VQSFSASEVDISWNSIAWNRSTGRVLGYEVLYWTEDSKETSSGKIRVS-G 848

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
             TT  +      +  FA V A+N A  GP S++++  T +  P    S  A  L +S  
Sbjct: 849 NITTKSITGLKANTLYFATVRAYNTAGTGPSSDLVNVTTKKSPPSQAPSNIAWKLKNSKL 908

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STK 577
            L W  VK  +    ++GYKI Y+  + +K         +I +   TSA++  L P    
Sbjct: 909 CLNWEHVKTMENESDVLGYKILYRQNRQSKT--------HILETNNTSAEI--LVPFGED 958

Query: 578 YRIHLAGYTKAGDGAESKYL 597
           Y I +   +  GDG+ S+ +
Sbjct: 959 YIIEIRTVSDGGDGSSSEKI 978


>gi|66393077|ref|NP_571436.1| neural cell adhesion molecule L1.2 precursor [Danio rerio]
 gi|36143027|gb|AAQ85080.1| neural adhesion molecule L1.2 [Danio rerio]
          Length = 1271

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/395 (31%), Positives = 193/395 (48%), Gaps = 27/395 (6%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIW-SKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           + L  + +EL CI  G P P   W  KDGV      R ++ +  + L  +++  +D G Y
Sbjct: 267 LVLSGQNLELECIVQGLPSPSIQWIRKDGV--LSESRTTKDSNDRVLRFQNISETDGGEY 324

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C  +N  G + +++  ++V AAPY+  EP+    A  ETV  ECKA G+P+PE+ W  N
Sbjct: 325 QCTATNPQGMS-THTYRVTVEAAPYWIKEPKSQLYAPGETVKLECKADGIPKPEVTWSIN 383

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           G  +S   P+PRR V    +T++N+  SDT  + C A +  G V  + YV V+   P+I 
Sbjct: 384 GILLSDIDPDPRRSVKHGVLTLKNVELSDTAVFQCKAASKHGSVLINAYVYVIELPPQIL 443

Query: 223 EAPKDEYTV-DGKTVVLTCRVFGAPKPEVNW--------IHNQKELTGGRYTILETGDLK 273
                 Y+V +G+T  L C  FG+P+P V W        + NQ      R   L  G L+
Sbjct: 444 TEDGLMYSVAEGQTTELACETFGSPRPNVTWEGESWGALVANQ------RMIQLSDGSLQ 497

Query: 274 ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVS 333
           I++ +  DSG+YTC   N   T   +  L V   T I   P    ++ G+ AT  C    
Sbjct: 498 ISNASLNDSGQYTCTVNNSKITI--TAELDVLNKTVIVKPPLALRIQRGKPATLTCEYQV 555

Query: 334 DPSLKL-SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
           D    L  + W +  + +   S+      ++ +L + +  E D G YTC   T LD  +A
Sbjct: 556 DSRQDLPQVQWRKNMQKLTESSDSDKYMIDESTLIIPEVEEEDEGIYTCEVITTLDMAKA 615

Query: 393 QATLTVQVPLEAPSNFTLIQVIDAK--KAVVSWNP 425
             ++T+   ++ P   +LIQ+ + K  +  +SW P
Sbjct: 616 SGSITI---VDRPDPPSLIQMTEPKERRVTLSWTP 647



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 135/572 (23%), Positives = 223/572 (38%), Gaps = 78/572 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
           + +  EC   GLP P I W+     +S++     +      +  +N+ ++D G Y C AT
Sbjct: 272 QNLELECIVQGLPSPSIQWIRKDGVLSES--RTTKDSNDRVLRFQNISETDGGEYQCTAT 329

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT 260
           N  G       V V A AP   + PK +    G+TV L C+  G PKPEV W  N   L+
Sbjct: 330 NPQGMSTHTYRVTVEA-APYWIKEPKSQLYAPGETVKLECKADGIPKPEVTWSINGILLS 388

Query: 261 G----GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-- 314
                 R ++ + G L + +V  +D+  + C A +K       GS+ +  + ++ + P  
Sbjct: 389 DIDPDPRRSV-KHGVLTLKNVELSDTAVFQCKAASK------HGSVLINAYVYVIELPPQ 441

Query: 315 ---ED---YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
              ED   Y V  GQ+    C     P  + ++ W  G       +  R +Q +D SL +
Sbjct: 442 ILTEDGLMYSVAEGQTTELACETFGSP--RPNVTW-EGESWGALVANQRMIQLSDGSLQI 498

Query: 369 TKSSELDSGQYTCRAQ-------TELDFIEAQATLTVQVPLE------APSNFTLIQVID 415
           + +S  DSGQYTC           ELD +    T+ V+ PL        P+  T    +D
Sbjct: 499 SNASLNDSGQYTCTVNNSKITITAELDVL--NKTVIVKPPLALRIQRGKPATLTCEYQVD 556

Query: 416 AKKAV--VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPA 473
           +++ +  V W                +Q  TE        + ++++      EV++    
Sbjct: 557 SRQDLPQVQWR-------------KNMQKLTESSDSD---KYMIDESTLIIPEVEEEDEG 600

Query: 474 SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV 533
                 +   + A     S  I+ V     P  +Q  E          L W      N  
Sbjct: 601 IYTCEVITTLDMAK---ASGSITIVDRPDPPSLIQMTEP---KERRVTLSWTPGADHNSP 654

Query: 534 LMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
           ++ Y I+++     +     E L  +S   ++      L+P   YR  +    + G    
Sbjct: 655 VLEYLIEFEETGSDRKE--WEELSRVS--CSSQRATLPLKPFISYRFRVIAINEIGKSDP 710

Query: 594 SKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR-HNT 646
           S            P  NP+ V      P  LVI+W  M     N P F Y++ WR+   +
Sbjct: 711 SMVTEAYSTPAAPPDSNPEGVRSDSDEPGTLVITWKEMDRRSFNGPDFHYKVMWRKVLGS 770

Query: 647 GEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           G +W+  D+        V+ +   F  ++IKV
Sbjct: 771 GPSWHTKDIT---SPPFVVTDVGNFSAFDIKV 799



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 136/288 (47%), Gaps = 22/288 (7%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIRELIVNK 459
            PLEAP +  LI +I++    V+W  V+ +++RG  +GYK+  T+    G+   RE     
Sbjct: 823  PLEAPLDVGLI-LINSTAIKVTWAAVNRETVRGRLQGYKIYLTYLGPKGQHLRREPKTTF 881

Query: 460  GESTTTEVDKFV-----PASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
              +T +  +K V     P S     V  FN    GP SE I F TPEGVPG   SL    
Sbjct: 882  VVTTDSNEEKKVLGDLQPFSHYNLAVSVFNYKGEGPQSESILFFTPEGVPGPPSSLMLDS 941

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
               +   + W  P QPNG L+GY +++Q +        L ++  ISDPT +  KL  L+P
Sbjct: 942  PSETEMTVHWTPPNQPNGNLIGYILQHQQLDNDAS---LMQVVKISDPTASHYKLK-LDP 997

Query: 575  STKYRIHLAGYTKAGDGA---ESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHN 631
             ++YR +L GYT  G+G    +       P    D     G T  NL  +W +  E + N
Sbjct: 998  HSRYRFYLRGYTAIGEGLPIIKDGATTLDPVPPSDISISTGETSVNL--TWVSK-ERQRN 1054

Query: 632  APHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN-QPTFQPYEIKV 678
               F   I + R +  + W + + ++  QS   L   QP  Q Y +K+
Sbjct: 1055 VEFF---IHYLRKDGPDKWEKSEKVNSTQSFYTLHGLQPGSQ-YRLKI 1098



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 93/366 (25%), Positives = 142/366 (38%), Gaps = 41/366 (11%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSD----RISQGNYGKSLIIKHVEFSD-QGSYTCE 105
           + L C   G P P   W KDGV  +PS      +S+ +   SL  K       QG Y C 
Sbjct: 69  ITLTCDATGNPPPTFRWVKDGVEFDPSKDPDLSVSRDSGTFSLTAKDGPIHQYQGRYNCY 128

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEE-ETVTFECK-ASGLPEPEIHWVHNG 163
            SN +G A S    +     P    E       EE E+V   C   +G   P IHW+   
Sbjct: 129 ASNELGTAVSNEARIVTENTPTLQTEKIITKKVEEGESVVLPCNPPNGTVAPVIHWMD-- 186

Query: 164 KPISQAPPNPRRKVGPN------RITIENLRKSDTGNYGCNATNSLGYVYK--------- 208
           K +     N R   G +        T+ + R     +Y CN       V K         
Sbjct: 187 KKLRHIQQNERVIQGRDGNLYFPHATVADSRD----DYTCNIQFPSARVIKLKEPIKLTV 242

Query: 209 ----DVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRY 264
                V  N        T +      + G+ + L C V G P P + WI     L+  R 
Sbjct: 243 SSSNSVVRNRRPQMMRPTGSSSSYLVLSGQNLELECIVQGLPSPSIQWIRKDGVLSESR- 301

Query: 265 TILETGD--LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAG 322
           T  ++ D  L+  +++  D GEY C A N  G +  +  +TV+   +   +P+      G
Sbjct: 302 TTKDSNDRVLRFQNISETDGGEYQCTATNPQGMSTHTYRVTVEAAPYWIKEPKSQLYAPG 361

Query: 323 QSATFRCNAVSDPSLKLSIVW-LRGSEPIDFESEPRFVQSNDYSLTVTKSSEL-DSGQYT 380
           ++    C A   P  K  + W + G    D + +PR  +S  + +   K+ EL D+  + 
Sbjct: 362 ETVKLECKADGIP--KPEVTWSINGILLSDIDPDPR--RSVKHGVLTLKNVELSDTAVFQ 417

Query: 381 CRAQTE 386
           C+A ++
Sbjct: 418 CKAASK 423



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 120/280 (42%), Gaps = 28/280 (10%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGV---PINPSDRISQGNYGKSLIIKHVEFS 97
           K ++    + V+L C   G P P+  WS +G+    I+P  R S  +    L +K+VE S
Sbjct: 354 KSQLYAPGETVKLECKADGIPKPEVTWSINGILLSDIDPDPRRSVKH--GVLTLKNVELS 411

Query: 98  DQGSYTCEVSNGVGE----AKSYSIDLSVLAAPYFTVEPEFI-NAAEEETVTFECKASGL 152
           D   + C+ ++  G     A  Y I+L     P    E   + + AE +T    C+  G 
Sbjct: 412 DTAVFQCKAASKHGSVLINAYVYVIEL----PPQILTEDGLMYSVAEGQTTELACETFGS 467

Query: 153 PEPEIHWVHNGKPISQAPPNPRR-KVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVY 211
           P P + W   G+       N R  ++    + I N   +D+G Y C   NS   +  ++ 
Sbjct: 468 PRPNVTW--EGESWGALVANQRMIQLSDGSLQISNASLNDSGQYTCTVNNSKITITAELD 525

Query: 212 VNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPK---PEVNWIHNQKELT----GGRY 264
           V    +   I + P       GK   LTC      +   P+V W  N ++LT      +Y
Sbjct: 526 V---LNKTVIVKPPLALRIQRGKPATLTCEYQVDSRQDLPQVQWRKNMQKLTESSDSDKY 582

Query: 265 TILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTV 304
            I E+  L I +V   D G YTC     L  A+ SGS+T+
Sbjct: 583 MIDEST-LIIPEVEEEDEGIYTCEVITTLDMAKASGSITI 621



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 120/306 (39%), Gaps = 35/306 (11%)

Query: 124 AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           + P  T +P+ +     + +T  C A+G P P   WV +G     +  +P   V  +  T
Sbjct: 50  SPPVITAQPKSVTTFSADDITLTCDATGNPPPTFRWVKDGVEFDPS-KDPDLSVSRDSGT 108

Query: 184 IENLRKSD-----TGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEAPKDEYTVDGKTVV 237
                K        G Y C A+N LG    +    V  + P + TE    +   +G++VV
Sbjct: 109 FSLTAKDGPIHQYQGRYNCYASNELGTAVSNEARIVTENTPTLQTEKIITKKVEEGESVV 168

Query: 238 LTCR-VFGAPKPEVNWIHNQKELTGGRYTILE--TGDLKITDVAFADS-GEYTC---FAR 290
           L C    G   P ++W+  +         +++   G+L       ADS  +YTC   F  
Sbjct: 169 LPCNPPNGTVAPVIHWMDKKLRHIQQNERVIQGRDGNLYFPHATVADSRDDYTCNIQFPS 228

Query: 291 NKLGTAQGSGSLTVKEHTHI-----------TDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
            ++   +    LTV     +           T     Y V +GQ+    C     PS   
Sbjct: 229 ARVIKLKEPIKLTVSSSNSVVRNRRPQMMRPTGSSSSYLVLSGQNLELECIVQGLPS--P 286

Query: 340 SIVWLRGSEPIDFESEPRFVQ-SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           SI W+R    +   SE R  + SND  L     SE D G+Y C A       +  +T T 
Sbjct: 287 SIQWIRKDGVL---SESRTTKDSNDRVLRFQNISETDGGEYQCTATNP----QGMSTHTY 339

Query: 399 QVPLEA 404
           +V +EA
Sbjct: 340 RVTVEA 345



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 82/197 (41%), Gaps = 15/197 (7%)

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK 257
           N T ++   YK   +  L   P IT  PK   T     + LTC   G P P   W+ +  
Sbjct: 34  NTTINIPSRYK---IRDLKSPPVITAQPKSVTTFSADDITLTCDATGNPPPTFRWVKDGV 90

Query: 258 ELTGGRYTIL----ETGDLKITDV---AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
           E    +   L    ++G   +T          G Y C+A N+LGTA  + +  V E+T  
Sbjct: 91  EFDPSKDPDLSVSRDSGTFSLTAKDGPIHQYQGRYNCYASNELGTAVSNEARIVTENTPT 150

Query: 311 --TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
             T++    +VE G+S    CN   + ++   I W+   +    +   R +Q  D +L  
Sbjct: 151 LQTEKIITKKVEEGESVVLPCNP-PNGTVAPVIHWM-DKKLRHIQQNERVIQGRDGNLYF 208

Query: 369 TKSSELDS-GQYTCRAQ 384
             ++  DS   YTC  Q
Sbjct: 209 PHATVADSRDDYTCNIQ 225


>gi|432859229|ref|XP_004069076.1| PREDICTED: contactin-4-like [Oryzias latipes]
          Length = 1011

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 183/388 (47%), Gaps = 15/388 (3%)

Query: 47  RNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           +   V+L C   G P P   W + DG P     ++        L I + +  D G+Y C 
Sbjct: 209 KGSTVKLECFALGNPAPSITWRREDGAPF--PRKVDTRKTNGVLEIPYFQQDDVGTYECV 266

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             N  G  K     LS  A P+   +P+ +    ++++ +ECKA+G P+P   W+ NG+ 
Sbjct: 267 AENSRGMNKVKG-KLSFYAPPHLIEKPQDVQKLIDDSLVWECKATGKPKPSYRWMKNGEN 325

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +       R +V    ++I  L  SDTG Y C A N  G VY +  + V+A AP+ +   
Sbjct: 326 LEST--EERIQVANGVLSISRLTLSDTGMYQCVAGNKHGEVYSNAELRVIAAAPDFSHNQ 383

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADS 282
               T+   G  +++ CR   +P   ++W    + L    R  IL+ G L+I +V  +D+
Sbjct: 384 LRSQTMVKVGGDMLVECRPKMSPWGVISWRKGSEPLQQSNRIVILDNGSLRIWNVTKSDA 443

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC ARN+ G A  +GS+TVKE + IT QP   +   G+S    C    DPSL+L   
Sbjct: 444 GLYTCVARNQFGMASSTGSVTVKEASVITTQPSTLDATVGESVVLPCQVSHDPSLELKFT 503

Query: 343 WLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           W    + I F S   F      Q +   + +       +G+YTC  QT++D I     L 
Sbjct: 504 WFFNEQLIHFGSHDGFFEKVGGQHSAGDIMIRNIQLKHAGKYTCAVQTKVDSISVALDLI 563

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           V+ P   P++  + ++ D   A +SW P
Sbjct: 564 VRGPPAPPTHIQVEEITDT-TASLSWRP 590



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 144/334 (43%), Gaps = 37/334 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V + +       ++           P   V+ PE ++ 
Sbjct: 148 NLYIAKVEPSDVGNYTCVVTNTVTKTRVQGPSTPLVLRSDGVMGEYEPKIEVQFPEIVHV 207

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNR----ITIENLRKSDT 192
           A+  TV  EC A G P P I W   +G P         RKV   +    + I   ++ D 
Sbjct: 208 AKGSTVKLECFALGNPAPSITWRREDGAPFP-------RKVDTRKTNGVLEIPYFQQDDV 260

Query: 193 GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNW 252
           G Y C A NS G       ++  A  P + E P+D   +   ++V  C+  G PKP   W
Sbjct: 261 GTYECVAENSRGMNKVKGKLSFYA-PPHLIEKPQDVQKLIDDSLVWECKATGKPKPSYRW 319

Query: 253 IHNQKELTGGRYTI-LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK------ 305
           + N + L      I +  G L I+ +  +D+G Y C A NK G    +  L V       
Sbjct: 320 MKNGENLESTEERIQVANGVLSISRLTLSDTGMYQCVAGNKHGEVYSNAELRVIAAAPDF 379

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
            H  +  Q     V+ G      C     P   +S  W +GSEP+  +   R V  ++ S
Sbjct: 380 SHNQLRSQ---TMVKVGGDMLVECRPKMSPWGVIS--WRKGSEPL--QQSNRIVILDNGS 432

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           L +   ++ D+G YTC A+ +     +  ++TV+
Sbjct: 433 LRIWNVTKSDAGLYTCVARNQFGMASSTGSVTVK 466



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 107/284 (37%), Gaps = 51/284 (17%)

Query: 144 TFECKASG---LPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
           TFE K +G   LP+   H+  +G              G  RI+  N R  D G Y C A+
Sbjct: 27  TFEWKLNGTEILPKAGSHFSLSG--------------GNLRISRLN-RDRDAGTYQCLAS 71

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPE-----VNWIH 254
           NS G +         A+        +   +V +G+ +VL C     P P       +WI 
Sbjct: 72  NSFGTIVSREASLTFAYLESFKTQRRSPVSVREGQGMVLLC----GPPPHSGDLVFSWIF 127

Query: 255 NQK----ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGT--AQGSGSLTVKEHT 308
           N+     +    R+   ETG+L I  V  +D G YTC   N +     QG  +  V    
Sbjct: 128 NESTTFVQQETRRFISQETGNLYIAKVEPSDVGNYTCVVTNTVTKTRVQGPSTPLVLRSD 187

Query: 309 HITDQ---------PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFV 359
            +  +         PE   V  G +    C A+ +P+   SI W R     D    PR V
Sbjct: 188 GVMGEYEPKIEVQFPEIVHVAKGSTVKLECFALGNPA--PSITWRRE----DGAPFPRKV 241

Query: 360 QSNDYS--LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            +   +  L +    + D G Y C A+      + +  L+   P
Sbjct: 242 DTRKTNGVLEIPYFQQDDVGTYECVAENSRGMNKVKGKLSFYAP 285



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 50/121 (41%), Gaps = 9/121 (7%)

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAESK------YLFYVPFKNPDNVEGRGSTPNNLV 619
           +A +  L P  +Y   +    + G G  SK           P   P NV G G + + LV
Sbjct: 629 TAVVIDLNPWVEYEFRVLASNRIGTGEPSKPSKQARTKSTSPKVTPANVSGGGGSRSELV 688

Query: 620 ISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIK 677
           I+W  +PE   N P F Y + +R H     W Q  V     S  V  N+    F P+ +K
Sbjct: 689 ITWEPVPEELQNGPGFGYVVAFRPHG-ATGWMQAAVPSPEASRYVFKNESIQPFSPFHVK 747

Query: 678 V 678
           V
Sbjct: 748 V 748


>gi|350591362|ref|XP_003132376.3| PREDICTED: neural cell adhesion molecule L1-like protein [Sus
           scrofa]
          Length = 1225

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 185/721 (25%), Positives = 306/721 (42%), Gaps = 70/721 (9%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           +R   + L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D
Sbjct: 262 SRSSVIILKGETLLLECFAEGLPTPQVDWNKMGGDL-PKGRETKENYGKTLKIENVSYQD 320

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
           +G+Y C  +N +G A ++   + V   P +T +P+    +   +    C+A G PEP I 
Sbjct: 321 KGNYRCTANNFLGSA-THDFHVIVEEPPRWTKKPQSGVYSTGSSGILLCEAEGEPEPTIK 379

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W  NG PI + P +    + P  I+  N++ + T  Y C A+N  G +     ++V+   
Sbjct: 380 WRVNGSPIERNPFS-GDVISPGEISFTNVQPNHTAVYQCEASNVHGTILASANIDVVDVR 438

Query: 219 PEITEAPKDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKIT 275
           P I    ++ Y TV G +  L C  F +P+  V+W  +   K L G RY I E G L+I 
Sbjct: 439 PLIQTTDEENYATVVGYSAFLHCEFFASPEAIVSWQKVEEAKPLEGRRYHIHENGTLQIN 498

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
                D+G Y+C+  N  G    + +L ++  T +   P++  V    +    C    D 
Sbjct: 499 TTTEEDAGSYSCWVENAKGKTAVTANLDIRNATKLRVSPKNPRVPKSHTLELHCENKCDS 558

Query: 336 SLK--LSIVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
            LK  L + W +  E  +   +E   +  +  +LT+   +  D G Y+C A T LD    
Sbjct: 559 YLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANLTIANVTLEDQGIYSCLAHTSLDSTAD 618

Query: 393 QATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSI 452
              +TV    + P N  L +  + +   ++W   +      +   Y V+    K+  G  
Sbjct: 619 MTQVTVLDVPDPPENLQLSERHN-RSVRLTWE--AGDDHNSNISEYIVEFEGNKEEPGRW 675

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSL 510
            EL    G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++
Sbjct: 676 EELARVPGKETTATL-SLAPYVRYQFRVIAMNEVGRSQPSQPSDHHETPPAAPDKNPQNI 734

Query: 511 EAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
                      +KW  +KP + NG  + Y++ ++       G L+E      + T T+  
Sbjct: 735 RVQASQPKEMIIKWEPLKPMEQNGPGLEYRVTWKP-----QGALVE----WEEETVTNHT 785

Query: 569 LAGLEPST--KYRIHLAGYTKAGDGAESK-YLFYVPFKNPDN---VEGRGSTPNNLV-IS 621
           L  + P+    Y + +      G   + +  + Y     PD    + G     + LV ++
Sbjct: 786 LRVMTPAVYAPYDVQVQAINHLGSAPDPQSVVLYSGEDYPDTAPVIHGVDVINSTLVKVT 845

Query: 622 WTAMPEIEHNAPHFK-YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQ 680
           W+ +P+ E    H K Y++ W        W    +LD R             P E+ V++
Sbjct: 846 WSTIPK-ERVHGHLKGYQVNW--------WKTKSLLDGRT-----------HPKEVNVLR 885

Query: 681 TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 740
            ++ +   G +  L            D F   S+    VLAFN    GP SE   F TPE
Sbjct: 886 -FSGQRNYGMVPSL------------DAF---SEFHLTVLAFNSKGAGPESEPYVFHTPE 929

Query: 741 G 741
           G
Sbjct: 930 G 930



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 93/188 (49%), Gaps = 10/188 (5%)

Query: 411  IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK---DGEGSIRELIVNK--GESTTT 465
            + VI++    V+W+ +  + + GH +GY+V  W  K   DG    +E+ V +  G+    
Sbjct: 834  VDVINSTLVKVTWSTIPKERVHGHLKGYQVNWWKTKSLLDGRTHPKEVNVLRFSGQRNYG 893

Query: 466  EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWV 525
             V      S+    VLAFN    GP SE   F TPEGVP     L+ I +      L W 
Sbjct: 894  MVPSLDAFSEFHLTVLAFNSKGAGPESEPYVFHTPEGVPEQPTFLKVIKVDKDTATLSWG 953

Query: 526  KPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
             P++ NG L GY ++YQ +  T ++G L +  +  +S P   S +L+ L  +TKY+ +L 
Sbjct: 954  LPKKLNGNLTGYLLQYQIINDTYEIGELNDINITTLSKP---SWRLSNLNATTKYKFYLR 1010

Query: 584  GYTKAGDG 591
              T  G G
Sbjct: 1011 ACTSKGCG 1018



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 182/483 (37%), Gaps = 83/483 (17%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P+  W+KD      SD   I   N G   I      S  QG Y C  SN
Sbjct: 54  QIECEAKGNPEPKYSWTKDDKHFELSDPRIIVSNNSGTFRIPNEGHISHFQGKYRCFASN 113

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKP 165
            +G A S  I+  V   P F  E  + +   E +++   C    GLP   I+W++   + 
Sbjct: 114 KLGVAMSEEIEFIVPNVPKFPKEKIDPLEVEEGDSIVLPCNPPKGLPPLHIYWMNIELEH 173

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA- 218
           I Q       + G   +   N+ + D+ N Y C A        +  +   + VN L HA 
Sbjct: 174 IEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHAN 231

Query: 219 -------------------PEITEAPKDE------YTVDGKTVVLTCRVFGAPKPEVNWI 253
                              P +   P +         + G+T++L C   G P P+V+W 
Sbjct: 232 DSSSSTEIGSKANSIKQRKPRLLLPPPESGSRSSVIILKGETLLLECFAEGLPTPQVDWN 291

Query: 254 HNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD 312
               +L  GR T    G  LKI +V++ D G Y C A N LG+A     + V+E    T 
Sbjct: 292 KMGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTANNFLGSATHDFHVIVEEPPRWTK 351

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
           +P+      G S    C A  +P  + +I W     PI         + N +S  V    
Sbjct: 352 KPQSGVYSTGSSGILLCEAEGEP--EPTIKWRVNGSPI---------ERNPFSGDVISPG 400

Query: 373 ELD--------SGQYTCRAQTELDFIEAQATLTV--------------QVPLEAPSNFTL 410
           E+         +  Y C A      I A A + V                 +   S F  
Sbjct: 401 EISFTNVQPNHTAVYQCEASNVHGTILASANIDVVDVRPLIQTTDEENYATVVGYSAFLH 460

Query: 411 IQVIDAKKAVVSWN------PVSPQSLRGHFRG-YKVQTWTEKDGEGSIRELIVN-KGES 462
            +   + +A+VSW       P+  +    H  G  ++ T TE+D  GS    + N KG++
Sbjct: 461 CEFFASPEAIVSWQKVEEAKPLEGRRYHIHENGTLQINTTTEEDA-GSYSCWVENAKGKT 519

Query: 463 TTT 465
             T
Sbjct: 520 AVT 522



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 116/311 (37%), Gaps = 51/311 (16%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN----RITIENLRKSDTGNY 195
           +E    EC+A G PEP+  W  + K    +  +PR  V  N    RI  E       G Y
Sbjct: 50  DEYFQIECEAKGNPEPKYSWTKDDKHFELS--DPRIIVSNNSGTFRIPNEGHISHFQGKY 107

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A+N LG    +    ++ + P+  +   D   V +G ++VL C    G P   + W+
Sbjct: 108 RCFASNKLGVAMSEEIEFIVPNVPKFPKEKIDPLEVEEGDSIVLPCNPPKGLPPLHIYWM 167

Query: 254 HNQKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEH 307
           + + E      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV   
Sbjct: 168 NIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSL 227

Query: 308 THITDQPEDYEVEA-----------------------------GQSATFRCNAVSDPSLK 338
            H  D     E+ +                             G++    C A   P+ +
Sbjct: 228 KHANDSSSSTEIGSKANSIKQRKPRLLLPPPESGSRSSVIILKGETLLLECFAEGLPTPQ 287

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           +    + G  P   E++  + +    +L +   S  D G Y C A   L      AT   
Sbjct: 288 VDWNKMGGDLPKGRETKENYGK----TLKIENVSYQDKGNYRCTANNFL----GSATHDF 339

Query: 399 QVPLEAPSNFT 409
            V +E P  +T
Sbjct: 340 HVIVEEPPRWT 350


>gi|440901336|gb|ELR52306.1| Contactin-2, partial [Bos grunniens mutus]
          Length = 1018

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 165/615 (26%), Positives = 258/615 (41%), Gaps = 69/615 (11%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 229 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWATAE----PTLQIPSVGFEDEGTYEC 284

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEE------TVTFECKASGLPEPEIH 158
           E  N  G         +V        +PE++    +        + + C A+G P P + 
Sbjct: 285 EAENTKGRD-------TVQGRIIVQAQPEWLRVISDREADIGSDLHWACAAAGKPRPAVR 337

Query: 159 WVHNGKPI-SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAH 217
           W+ NG+P+ SQA    R +V    +    L   D+G Y C A N  G +Y    + V A 
Sbjct: 338 WLRNGEPLTSQA----RVEVMAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQAL 393

Query: 218 APEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKI 274
           AP+    P         G  VV+ C+   APK  V W    + L    R T+   G L I
Sbjct: 394 APDFRLNPVRRLIPAARGGEVVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLII 453

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
            +V+ +D G+YTCFA N +G A  +G+L+V++ T IT  P   ++  G + T +C+A  D
Sbjct: 454 RNVSRSDEGKYTCFAENFMGKANSTGTLSVRDATKITLAPSSADINLGDNLTLQCHASHD 513

Query: 335 PSLKLSIVWLRGSEPIDFES-----EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
           P++ L+ VW     PIDF+      +   V+     LT+  +     G+YTC AQT +D 
Sbjct: 514 PTMDLTFVWTLDDFPIDFDKPGGHYQRASVKETVGDLTILNAQLRHGGKYTCTAQTVVDS 573

Query: 390 IEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKD 447
              +AT+ V+ P  AP    +  + D     +SW+    +    H     Y +Q  T   
Sbjct: 574 ASKEATVLVRGPPGAPGGVVVRDISDT-SVQLSWS----RGFDNHSPIAKYTLQARTLPS 628

Query: 448 GE-GSIRELIVN-KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPG 505
           G+   +R    N +G + T +V    P      RVLA N         I+    P G   
Sbjct: 629 GKWKQVRTNPTNIEGNAETAQVLGLTPWMDYEFRVLASN---------ILGTGEPSGPSS 679

Query: 506 TVQSLEAIP-----------LGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPL 552
            +Q+ EA P                  + W  +  E  +G   GY + ++   GT     
Sbjct: 680 KIQTKEAAPSVAPSGLSGGGGAPGELTVTWTPMSREYQHGGGFGYLVSFRRQGGTSW--Q 737

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDN 607
             R+P  +D          + P T + + +  Y + GDG ES           P   P  
Sbjct: 738 TARVPG-ADAQYFVYSNDSIRPYTPFEVKIRSYNRRGDGPESLVAVVYSAEEEPRVAPPK 796

Query: 608 VEGRGSTPNNLVISW 622
           V  +  + + + +SW
Sbjct: 797 VWAKAVSSSEMNVSW 811



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 145/373 (38%), Gaps = 36/373 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH-VEFSDQGSYTCEVS 107
           +KV L C    +P     W  +G  +       Q   G +L+I +  +  D G Y C  S
Sbjct: 33  EKVTLACRARASPPATYRWKMNGTEMKLEPGSRQQLVGGNLVIMNPSKAQDAGVYQCLAS 92

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIH-------W 159
           N VG   S    L       F    EF     +   T E     LP  P  H       W
Sbjct: 93  NPVGTVVSREAVLR------FGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYRW 146

Query: 160 VHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY-----V 212
           + N  P +  P + R  V      + I     SD GNY C AT+ + +  K V+     +
Sbjct: 147 LLNEFP-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQL 205

Query: 213 NVLAH-----APEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
           N+ A      AP I    P + Y + G+ V L C  FG P P + W      L+    T 
Sbjct: 206 NLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWATA 265

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
             T  L+I  V F D G Y C A N  G     G + V+          D E + G    
Sbjct: 266 EPT--LQIPSVGFEDEGTYECEAENTKGRDTVQGRIIVQAQPEWLRVISDREADIGSDLH 323

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + C A   P  + ++ WLR  EP+  ++    +  +   L  +K S  DSG Y C A+ +
Sbjct: 324 WACAAAGKP--RPAVRWLRNGEPLTSQARVEVMAGD---LRFSKLSLEDSGMYQCVAENK 378

Query: 387 LDFIEAQATLTVQ 399
              I A A L VQ
Sbjct: 379 HGTIYASAELAVQ 391



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 147/615 (23%), Positives = 231/615 (37%), Gaps = 86/615 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P+    R+        L    +   D G Y C   N  G   
Sbjct: 326 CAAAGKPRPAVRWLRNGEPLTSQARVEV--MAGDLRFSKLSLEDSGMYQCVAENKHGTIY 383

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F + P    I AA    V   C+    P+  + W    + +  +  
Sbjct: 384 A-SAELAVQALAPDFRLNPVRRLIPAARGGEVVIPCQPRAAPKAVVLWSKGTEILVNSS- 441

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V P+  + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 442 --RVTVTPDGTLIIRNVSRSDEGKYTCFAENFMGKANSTGTLSV-RDATKITLAPSSADI 498

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G  + L C     P  ++ ++    +        GG Y   ++ ET GDL I +    
Sbjct: 499 NLGDNLTLQCHASHDPTMDLTFVWTLDDFPIDFDKPGGHYQRASVKETVGDLTILNAQLR 558

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
             G+YTC A+  + +A        KE T +   P       G         +SD S++LS
Sbjct: 559 HGGKYTCTAQTVVDSAS-------KEATVLVRGPP------GAPGGVVVRDISDTSVQLS 605

Query: 341 IVWLRGSE---PI-DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W RG +   PI  +  + R + S  +    T  + ++    T +      +++ +  +
Sbjct: 606 --WSRGFDNHSPIAKYTLQARTLPSGKWKQVRTNPTNIEGNAETAQVLGLTPWMDYEFRV 663

Query: 397 TVQVPL---EAPSNFTLIQVIDAKKAV----------------VSWNPVSPQSLRGHFRG 437
                L   E     + IQ  +A  +V                V+W P+S +   G   G
Sbjct: 664 LASNILGTGEPSGPSSKIQTKEAAPSVAPSGLSGGGGAPGELTVTWTPMSREYQHGGGFG 723

Query: 438 YKVQ-------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGP 490
           Y V        +W      G+  +  V          D   P +    ++ ++N   +GP
Sbjct: 724 YLVSFRRQGGTSWQTARVPGADAQYFVYSN-------DSIRPYTPFEVKIRSYNRRGDGP 776

Query: 491 PSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKGTK 548
            S +    + E  P      + A  + SS   + W   +Q  NG+L+GY+I+Y       
Sbjct: 777 ESLVAVVYSAEEEPRVAPPKVWAKAVSSSEMNVSWEPVQQDMNGILLGYEIRYWKAGAKA 836

Query: 549 VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNV 608
                 R   +     TSA + GL  STKY + +  Y +AG G  S        K P   
Sbjct: 837 AAAERVRTAGLD----TSALVTGLHASTKYHVTVRAYNRAGTGPASPSANATTMKPPPR- 891

Query: 609 EGRGSTPNNLVISWT 623
                 P N  ISWT
Sbjct: 892 ----RPPGN--ISWT 900



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 115/298 (38%), Gaps = 34/298 (11%)

Query: 126 PYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
           P F  +P    F   + EE VT  C+A   P     W  NG  +   P + ++ VG N +
Sbjct: 15  PVFEEQPLGLLFPEESTEEKVTLACRARASPPATYRWKMNGTEMKLEPGSRQQLVGGNLV 74

Query: 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTCR 241
            +   +  D G Y C A+N +G V     V       E ++  +D   T +G  V+L C 
Sbjct: 75  IMNPSKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCN 134

Query: 242 VFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGTA 296
                P     W+ N+      T GR+ + + TG+L I     +D G Y+C A + +  +
Sbjct: 135 PPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFS 194

Query: 297 QGSGSLTVKEHTHITDQPEDYEVEA---------------GQSATFRCNAVSDPSLKLSI 341
             S      +   +    ED  + A               GQ  T  C A  +P  +  I
Sbjct: 195 TKS---VFSKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPR--I 249

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            W +    +D    P++  + + +L +      D G Y C A+        Q  + VQ
Sbjct: 250 KWRK----VDGSLSPQWATA-EPTLQIPSVGFEDEGTYECEAENTKGRDTVQGRIIVQ 302


>gi|148702480|gb|EDL34427.1| mCG16114 [Mus musculus]
          Length = 1828

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 141/500 (28%), Positives = 212/500 (42%), Gaps = 23/500 (4%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA 199
           E+ V   C+A G+P P I W  +   +        ++     + I  L   DTG   C A
Sbjct: 2   EKVVDIPCRAKGIPPPSITWYKDAALVEVGKLTRFKQRSDGGLQISGLLPDDTGMLQCFA 61

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL 259
            N+ G      Y+ V + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L
Sbjct: 62  HNAAGEAQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERIL 121

Query: 260 TGG-----RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
             G     R+T+LE+G L I+    +D+G YTC A N  G  + S  L V   T IT  P
Sbjct: 122 ASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPP 181

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           +D  V  G  A+  C    DP + +  VW +    +  E+ PR     + SL ++++   
Sbjct: 182 QDQSVIKGTQASMVCGVTHDPRVTVRYVWEKDGATLAVETNPRIRLDRNGSLHISQTWSG 241

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRG 433
           D G YTCR  +        A L V+    AP +    +  ++ +   ++W    P     
Sbjct: 242 DIGTYTCRVLSAGGNDSRNAHLRVRQLPHAPEHPVATLSTVERRAINLTW--AKPFDGNS 299

Query: 434 HFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
               Y ++  +E +   +I    V+  E+T+  V   VPA     R+ A N    G  S+
Sbjct: 300 PLMRYVLEM-SENNAPWTILLASVDP-EATSVMVKGLVPARSYQFRLCAVNDVGKGQFSK 357

Query: 494 IISFVTPEGVPGTVQSLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKV 549
               V+    P T      I  G +  +  ++W  P +   NG+L GY I+Y  + G  V
Sbjct: 358 DTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRY-CLAGLPV 416

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKN 604
           G    +   I+D    +  L  L   T Y I +A Y  AG G  S       L  VP   
Sbjct: 417 G---YQFKNITDADVNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVP 473

Query: 605 PDNVEGRGSTPNNLVISWTA 624
           P NV    +    +  +W A
Sbjct: 474 PGNVHAEATNSTTIRFTWNA 493



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 121/467 (25%), Positives = 175/467 (37%), Gaps = 45/467 (9%)

Query: 234 KTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILET---GDLKITDVAFADSGEYTCFAR 290
           K V + CR  G P P + W  +   +  G+ T  +    G L+I+ +   D+G   CFA 
Sbjct: 3   KVVDIPCRAKGIPPPSITWYKDAALVEVGKLTRFKQRSDGGLQISGLLPDDTGMLQCFAH 62

Query: 291 NKLGTAQGSGSLTVKEHT-HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEP 349
           N  G AQ S  L V     +IT  P D  V  G S    C     P  + +I W +G   
Sbjct: 63  NAAGEAQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERI 120

Query: 350 IDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSN 407
           +   S   PRF      SL ++ +   D+G YTC A       EA A L V         
Sbjct: 121 LASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWA------- 173

Query: 408 FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEV 467
            T I      ++V+     S      H     V+   EKDG      L V        + 
Sbjct: 174 RTRITKPPQDQSVIKGTQASMVCGVTHDPRVTVRYVWEKDGA----TLAVETNPRIRLDR 229

Query: 468 DKFVPASKNFA--------RVLAFNGAYNGPPSEIISFV--TPEGVPGTVQSLEAIPLGS 517
           +  +  S+ ++        RVL+  G  +      +  +   PE    T+ ++E      
Sbjct: 230 NGSLHISQTWSGDIGTYTCRVLSAGGNDSRNAHLRVRQLPHAPEHPVATLSTVE-----R 284

Query: 518 SAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTK 577
            A  L W KP   N  LM Y ++  S        LL  +    DP  TS  + GL P+  
Sbjct: 285 RAINLTWAKPFDGNSPLMRYVLE-MSENNAPWTILLASV----DPEATSVMVKGLVPARS 339

Query: 578 YRIHLAGYTKAGDGAESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHN 631
           Y+  L      G G  SK    V      P   P NV   G T  +++I W   PE   N
Sbjct: 340 YQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQN 399

Query: 632 APHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
                Y I +        +   ++ D   + L+L +   +  YEI+V
Sbjct: 400 GILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLIIWTNYEIEV 446



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 142/633 (22%), Positives = 235/633 (37%), Gaps = 56/633 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           K V++ C   G P P   W KD   V +    R  Q + G  L I  +   D G   C  
Sbjct: 3   KVVDIPCRAKGIPPPSITWYKDAALVEVGKLTRFKQRSDG-GLQISGLLPDDTGMLQCFA 61

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPI 166
            N  GEA++ +       AP  T  P      +  +V   C+ SG P P I W    + +
Sbjct: 62  HNAAGEAQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERIL 121

Query: 167 SQAPPN-PR-RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           +      PR   +    + I     SD G Y C ATNS G       + V A    IT+ 
Sbjct: 122 ASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWART-RITKP 180

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDVAF 279
           P+D+  + G    + C V   P+  V ++  +   T       R  +   G L I+    
Sbjct: 181 PQDQSVIKGTQASMVCGVTHDPRVTVRYVWEKDGATLAVETNPRIRLDRNGSLHISQTWS 240

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------EDYEVEAGQSATFRCNAV 332
            D G YTC   +  G    +  L V++  H  + P       E   +    +  F  N+ 
Sbjct: 241 GDIGTYTCRVLSAGGNDSRNAHLRVRQLPHAPEHPVATLSTVERRAINLTWAKPFDGNS- 299

Query: 333 SDPSLKLSIVWLRGSEP-------IDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTC 381
             P ++  +     + P       +D E+    V+    +  Y   +   +++  GQ++ 
Sbjct: 300 --PLMRYVLEMSENNAPWTILLASVDPEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSK 357

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
             +        + +L  + P   P N       + +  ++ W P       G  +GY ++
Sbjct: 358 DTE--------RVSLPEEPPTAPPQNVIASGRTN-QSIMIQWQPPPESHQNGILKGYIIR 408

Query: 442 TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
                   G   + I +  +     ++  +  +     V A+N A  G  S  ++  T +
Sbjct: 409 YCLAGLPVGYQFKNITD-ADVNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQ 467

Query: 502 GV----PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK-IKYQSVKGTKVGPLLERL 556
           GV    PG V + EA    +  F      P+  NG+  GYK I ++  +  +V  +  R 
Sbjct: 468 GVPTVPPGNVHA-EATNSTTIRFTWNAPSPQFINGINQGYKLIAWEPAQEEEVTMVTAR- 525

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS--- 613
           P   D +     ++GL+  T+Y   +  +T  GDG  S        ++     G  S   
Sbjct: 526 PNFQD-SIHVGFVSGLKKFTEYFTSVLCFTTPGDGPRSSPQLVRTHEDVPGPVGHLSFND 584

Query: 614 -TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
               +L +SW      E N     YRI W  +N
Sbjct: 585 ILDTSLKVSWQE--PGEKNGILTGYRISWEEYN 615



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 74/177 (41%), Gaps = 11/177 (6%)

Query: 422 SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR-- 479
           +WN  SPQ + G  +GYK+  W E   E  +  +        +  V  FV   K F    
Sbjct: 490 TWNAPSPQFINGINQGYKLIAW-EPAQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYF 547

Query: 480 --VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
             VL F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY
Sbjct: 548 TSVLCFTTPGDGPRSSPQLVRTHEDVPGPVGHLSFNDILDTSLKVSWQEPGEKNGILTGY 607

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           +I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 608 RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 659



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ +      G   GYKV+ + EKD +   R  +V  
Sbjct: 877  VPSSGPTNVSALATTSSS-MLVRWSEIPEADRNGLVLGYKVR-YKEKDSDSQPRFWLVEG 934

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 935  NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 994

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P + Y
Sbjct: 995  SVRLIWQPPAAPNGIILAYQITHRLNATTANTATVEVL----APSARQYMATGLKPESVY 1050

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1051 LFRITAQTRKGWGEAAEAL 1069



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N   I    A +  V+W P    +  G  +GYK+  W  +    + R   +  
Sbjct: 1282 VPTAAPQNVA-IHSATATQLDVTWEPPPLDNQNGDIQGYKIYFWEVQRRNLTERVKTLFL 1340

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E++  ++      +     V AFN A +GP S      T +  P    S++   L +++
Sbjct: 1341 AENSV-KLKNLTGYTAYMVSVAAFNAAGDGPRSTPTRGQTQQAAPSAPGSVKFSELTTTS 1399

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNG L GY++ Y+
Sbjct: 1400 VNVSWDAPQFPNGPLEGYRLVYE 1422



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 128/308 (41%), Gaps = 48/308 (15%)

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 637 LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGAPTNLGISN---------- 682

Query: 426 VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
           + P+S+   FR GY  +T    W  +   G I E    L++    N+ ++ + EV    P
Sbjct: 683 IGPRSVTLQFRPGYDGKTSISRWVVEAQVGVIGEGEEWLLIYQLGNEPDARSMEVPDLNP 742

Query: 473 ASKNFARVLAFNGAYNGPPSE----IISFVTPEGV-PGTVQSLEAIPLGSSAFYLKWVK- 526
            +    R+   N     PPS+    I +   P  + P  V    A     ++ +L+W+  
Sbjct: 743 FTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDIAPANVTLRTA---SETSLWLRWMPL 799

Query: 527 PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
           PE     N   +GYKIKY    G   G  L     + D       +  LE  T+YR+ + 
Sbjct: 800 PEMEYNGNPESVGYKIKYGRSDGH--GKTLSHT--VQDRVEREYTIEDLEEWTEYRVQVQ 855

Query: 584 GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
            +   G G  S+ +       VP   P NV    +T +++++ W+ +PE + N     Y+
Sbjct: 856 AFNAIGSGPWSQAVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYK 915

Query: 639 IFWRRHNT 646
           + ++  ++
Sbjct: 916 VRYKEKDS 923


>gi|390475267|ref|XP_002758615.2| PREDICTED: contactin-4 isoform 1 [Callithrix jacchus]
          Length = 1025

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 186/722 (25%), Positives = 293/722 (40%), Gaps = 103/722 (14%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P  IW + DG PI    R  + N    L I + +  D G Y C   N 
Sbjct: 243 VKLECFALGNPVPTIIWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGLYECVAENS 300

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P +  +   ++ A EE V +ECKA+G P+P   W+ NG+P+   
Sbjct: 301 RGKNVARG-QLTFYAQPNWIQKINDVHVAMEENVFWECKANGRPKPTYRWLKNGEPLLT- 358

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
               R ++    + I  +  SD G Y C A N  G ++ +  +NV+A  P+ +       
Sbjct: 359 --QDRIQIEQGTLNITVVNLSDAGMYQCLAENKHGVIFSNAELNVIAVGPDFSRTLLKRL 416

Query: 230 TVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADSGEYT 286
           T+   G  VV+ C+   +PKP   W   +  L    R TI E G+L+I +V  +D+G YT
Sbjct: 417 TLVKVGGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYT 476

Query: 287 CFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           C A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   W   
Sbjct: 477 CIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFN 536

Query: 347 SEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPL 402
              IDF+ +     R    +   L +       +G+Y C  QT +D + A A L V+ P 
Sbjct: 537 GHLIDFDRDGDHFERVGGDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPP 596

Query: 403 EAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGEGSIRE 454
             P   T+ ++ D   A +SW P     SP ++      Y +Q  T          ++ E
Sbjct: 597 GPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFSVGWQAVSTVPE 649

Query: 455 LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTPEGVPG 505
           LI   G++ T  V    P  +   R +A N    G PS         E +  VTP  V G
Sbjct: 650 LI--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSG 707

Query: 506 TVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI--SD 561
              S        S   + W  V  E  NG   GY + ++       G ++  L  +  +D
Sbjct: 708 GGGS-------KSELVITWETVPEELQNGRGFGYVVAFR-----PYGKMIWMLTVLASAD 755

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPN 616
            +    +   + P + + + +  +   G+G  S           P K P ++  R  +  
Sbjct: 756 ASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSAT 815

Query: 617 NLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEI 676
           ++ + W +  E                                       N+   Q YE+
Sbjct: 816 DIEVFWASPLE--------------------------------------KNRGRIQGYEV 837

Query: 677 KVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 736
           K    W  +D E + R+ I   G  T+T++     ++     V A+N A  GP S  ++ 
Sbjct: 838 KY---WRHEDKEENARK-IRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPSSATVNV 893

Query: 737 VT 738
            T
Sbjct: 894 TT 895



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 162/637 (25%), Positives = 240/637 (37%), Gaps = 84/637 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V+ PE +  
Sbjct: 178 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPT 237

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   +GKPI++     RR      + I N ++ D G Y 
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIAR---KARRHKSNGILEIPNFQQEDAGLYE 294

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P   +   D +    + V   C+  G PKP   W+ N 
Sbjct: 295 CVAENSRGKNVARGQLTFYAQ-PNWIQKINDVHVAMEENVFWECKANGRPKPTYRWLKNG 353

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           + L       +E G L IT V  +D+G Y C A NK G    +  L V     I   P+ 
Sbjct: 354 EPLLTQDRIQIEQGTLNITVVNLSDAGMYQCLAENKHGVIFSNAELNV-----IAVGPDF 408

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  K    W +G + I  E+E R   S D +L +
Sbjct: 409 SRTLLKRLTLVKVGGEVVIECKPKASP--KPVYTWKKGRD-ILKENE-RITISEDGNLRI 464

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV------- 421
              ++ D+G YTC A        +   L V+ P       + + V   +  V+       
Sbjct: 465 INVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHD 524

Query: 422 -SWNPVSPQSLRGHFRGY-KVQTWTEKDGEGSIRELIVNKGE---------STTTEVDKF 470
            S + V   S  GH   + +     E+ G  S  +L++   +            T VD+ 
Sbjct: 525 HSLDIVFTWSFNGHLIDFDRDGDHFERVGGDSAGDLMIRNIQLKHAGKYVCMVQTSVDRL 584

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPEQ 529
             A+    R         GPP    +    E    T Q S    P   S   +  ++   
Sbjct: 585 SAAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQART 635

Query: 530 PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           P      + + +Q+V           +P + D  T +A + GL P  +Y          G
Sbjct: 636 P------FSVGWQAV---------STVPELIDGKTFTATVVGLNPWVEYEFRTVAANVIG 680

Query: 590 DGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  S      +    +P   P NV G G + + LVI+W  +PE   N   F Y + +R 
Sbjct: 681 IGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRP 740

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
           +     W    +     S  V  N+    F P+E+KV
Sbjct: 741 YGK-MIWMLTVLASADASRYVFRNESVRPFSPFEVKV 776



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 143/369 (38%), Gaps = 30/369 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  ++            SL+I +  +  D G+Y C  +
Sbjct: 44  KKVKLNCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDAGTYQCTAT 103

Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVHN 162
           N  G   S    L       F T     ++    + +   C   G P    E    W+ N
Sbjct: 104 NSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMVLLC---GPPPHSGELSYAWIFN 160

Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN- 213
             P  Q   + RR V      + I  + KSD GNY C  TN+      LG     +  N 
Sbjct: 161 EYPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRND 217

Query: 214 --VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILET 269
             +  + P+I  + P+   T  G TV L C   G P P + W   + K +          
Sbjct: 218 GVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHKSN 277

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I +    D+G Y C A N  G     G LT     +   +  D  V   ++  + C
Sbjct: 278 GILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDVHVAMEENVFWEC 337

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   P  K +  WL+  EP+  +     +Q    +L +T  +  D+G Y C A+ +   
Sbjct: 338 KANGRP--KPTYRWLKNGEPLLTQDR---IQIEQGTLNITVVNLSDAGMYQCLAENKHGV 392

Query: 390 IEAQATLTV 398
           I + A L V
Sbjct: 393 IFSNAELNV 401



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 117/303 (38%), Gaps = 34/303 (11%)

Query: 119 DLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D S L  P F  EP    F   +EE+ V   C+  G P+P I W  NG  +     + R 
Sbjct: 19  DDSTLHGPIFIQEPSPVMFPLDSEEKKVKLNCEVKGNPKPHIRWKLNGTDVDIG-MDFRY 77

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            V    + I N  K+ D G Y C ATNS G +         A+        +   +V  G
Sbjct: 78  SVVEGSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRG 137

Query: 234 KTVVLTCRVFGAPKPEVN-----WIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYT 286
           + +VL C     P P        WI N+        R+   ETG+L I  V  +D G YT
Sbjct: 138 QGMVLLC----GPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYT 193

Query: 287 CFARNK------LG-----TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           C   N       LG       +  G +   E       PE      G +    C A+ +P
Sbjct: 194 CVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNP 253

Query: 336 SLKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
               +I+W R   +PI    + R  +SN   L +    + D+G Y C A+       A+ 
Sbjct: 254 V--PTIIWRRADGKPI--ARKARRHKSNGI-LEIPNFQQEDAGLYECVAENSRGKNVARG 308

Query: 395 TLT 397
            LT
Sbjct: 309 QLT 311



 Score = 42.7 bits (99), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 21/192 (10%)

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            RG  +GY+V+ W  +D E + R+ I   G  T+T++     ++     V A+N A  GP 
Sbjct: 829  RGRIQGYEVKYWRHEDKEENARK-IRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPS 887

Query: 492  SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
            S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 888  SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNR 943

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
             +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P  + 
Sbjct: 944  QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIPKISN 993

Query: 606  DNVEGRGSTPNN 617
                G G++ +N
Sbjct: 994  AYARGSGASTSN 1005


>gi|359073808|ref|XP_003587094.1| PREDICTED: contactin-2-like [Bos taurus]
          Length = 1040

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 165/615 (26%), Positives = 258/615 (41%), Gaps = 69/615 (11%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWATAE----PTLQIPSVGFEDEGTYEC 306

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEE------TVTFECKASGLPEPEIH 158
           E  N  G         +V        +PE++    +        + + C A+G P P + 
Sbjct: 307 EAENTKGRD-------TVQGRIIVQAQPEWLRVISDREADIGSDLHWACAAAGKPRPAVR 359

Query: 159 WVHNGKPI-SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAH 217
           W+ NG+P+ SQA    R +V    +    L   D+G Y C A N  G +Y    + V A 
Sbjct: 360 WLRNGEPLTSQA----RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQAL 415

Query: 218 APEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKI 274
           AP+    P         G  VV+ C+   APK  V W    + L    R T+   G L I
Sbjct: 416 APDFRLNPVRRLIPAARGGEVVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLII 475

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
            +V+ +D G+YTCFA N +G A  +G+L+V++ T IT  P   ++  G + T +C+A  D
Sbjct: 476 RNVSRSDEGKYTCFAENFMGKANSTGTLSVRDATKITLAPSSADINLGDNLTLQCHASHD 535

Query: 335 PSLKLSIVWLRGSEPIDFES-----EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
           P++ L+ VW     PIDF+      +   V+     LT+  +     G+YTC AQT +D 
Sbjct: 536 PTMDLTFVWTLDDFPIDFDKPGGHYQRASVKETVGDLTILNAQLRHGGKYTCTAQTVVDS 595

Query: 390 IEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKD 447
              +AT+ V+ P  AP    +  + D     +SW+    +    H     Y +Q  T   
Sbjct: 596 ASKEATVLVRGPPGAPGGVVVRDISDT-SVQLSWS----RGFDNHSPIAKYTLQARTLPS 650

Query: 448 GE-GSIRELIVN-KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPG 505
           G+   +R    N +G + T +V    P      RVLA N         I+    P G   
Sbjct: 651 GKWKQVRTNPTNIEGNAETAQVLGLTPWMDYEFRVLASN---------ILGTGEPSGPSS 701

Query: 506 TVQSLEAIP-----------LGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPL 552
            +Q+ EA P                  + W  +  E  +G   GY + ++   GT     
Sbjct: 702 KIQTKEAAPSVAPSGLSGGGGAPGELTVTWTPMSREYQHGGGFGYLVSFRRQGGTSWQ-- 759

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDN 607
             R+P  +D          + P T + + +  Y + GDG ES           P   P  
Sbjct: 760 TARVPG-ADAQYFVYSNDSIRPYTPFEVKIRSYNRRGDGPESLVAVVYSAEEEPRVAPPK 818

Query: 608 VEGRGSTPNNLVISW 622
           V  +  + + + +SW
Sbjct: 819 VWAKAVSSSEMNVSW 833



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 145/373 (38%), Gaps = 36/373 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH-VEFSDQGSYTCEVS 107
           +KV L C    +P     W  +G  +       Q   G +L+I +  +  D G Y C  S
Sbjct: 55  EKVTLACRARASPPATYRWKMNGTEMKLEPGSRQQLVGGNLVIMNPSKAQDAGVYQCLAS 114

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIH-------W 159
           N VG   S    L       F    EF     +   T E     LP  P  H       W
Sbjct: 115 NPVGTVVSREAVLR------FGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYRW 168

Query: 160 VHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY-----V 212
           + N  P +  P + R  V      + I     SD GNY C AT+ + +  K V+     +
Sbjct: 169 LLNEFP-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQL 227

Query: 213 NVLAH-----APEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
           N+ A      AP I    P + Y + G+ V L C  FG P P + W      L+    T 
Sbjct: 228 NLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWATA 287

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
             T  L+I  V F D G Y C A N  G     G + V+          D E + G    
Sbjct: 288 EPT--LQIPSVGFEDEGTYECEAENTKGRDTVQGRIIVQAQPEWLRVISDREADIGSDLH 345

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + C A   P  + ++ WLR  EP+  ++    +  +   L  +K S  DSG Y C A+ +
Sbjct: 346 WACAAAGKP--RPAVRWLRNGEPLTSQARVEVLAGD---LRFSKLSLEDSGMYQCVAENK 400

Query: 387 LDFIEAQATLTVQ 399
              I A A L VQ
Sbjct: 401 HGTIYASAELAVQ 413



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 147/615 (23%), Positives = 231/615 (37%), Gaps = 86/615 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P+    R+        L    +   D G Y C   N  G   
Sbjct: 348 CAAAGKPRPAVRWLRNGEPLTSQARVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTIY 405

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F + P    I AA    V   C+    P+  + W    + +  +  
Sbjct: 406 A-SAELAVQALAPDFRLNPVRRLIPAARGGEVVIPCQPRAAPKAVVLWSKGTEILVNSS- 463

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V P+  + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 464 --RVTVTPDGTLIIRNVSRSDEGKYTCFAENFMGKANSTGTLSV-RDATKITLAPSSADI 520

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G  + L C     P  ++ ++    +        GG Y   ++ ET GDL I +    
Sbjct: 521 NLGDNLTLQCHASHDPTMDLTFVWTLDDFPIDFDKPGGHYQRASVKETVGDLTILNAQLR 580

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
             G+YTC A+  + +A        KE T +   P       G         +SD S++LS
Sbjct: 581 HGGKYTCTAQTVVDSAS-------KEATVLVRGPP------GAPGGVVVRDISDTSVQLS 627

Query: 341 IVWLRGSE---PI-DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W RG +   PI  +  + R + S  +    T  + ++    T +      +++ +  +
Sbjct: 628 --WSRGFDNHSPIAKYTLQARTLPSGKWKQVRTNPTNIEGNAETAQVLGLTPWMDYEFRV 685

Query: 397 TVQVPL---EAPSNFTLIQVIDAKKAV----------------VSWNPVSPQSLRGHFRG 437
                L   E     + IQ  +A  +V                V+W P+S +   G   G
Sbjct: 686 LASNILGTGEPSGPSSKIQTKEAAPSVAPSGLSGGGGAPGELTVTWTPMSREYQHGGGFG 745

Query: 438 YKVQ-------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGP 490
           Y V        +W      G+  +  V          D   P +    ++ ++N   +GP
Sbjct: 746 YLVSFRRQGGTSWQTARVPGADAQYFVYSN-------DSIRPYTPFEVKIRSYNRRGDGP 798

Query: 491 PSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKGTK 548
            S +    + E  P      + A  + SS   + W   +Q  NG+L+GY+I+Y       
Sbjct: 799 ESLVAVVYSAEEEPRVAPPKVWAKAVSSSEMNVSWEPVQQDMNGILLGYEIRYWKAGAKA 858

Query: 549 VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNV 608
                 R   +     TSA + GL  STKY + +  Y +AG G  S        K P   
Sbjct: 859 AAAERVRTAGLD----TSALVTGLHASTKYHVTVRAYNRAGTGPASPSANATTMKPPPR- 913

Query: 609 EGRGSTPNNLVISWT 623
                 P N  ISWT
Sbjct: 914 ----RPPGN--ISWT 922



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 115/298 (38%), Gaps = 34/298 (11%)

Query: 126 PYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
           P F  +P    F   + EE VT  C+A   P     W  NG  +   P + ++ VG N +
Sbjct: 37  PVFEEQPLGLLFPEESTEEKVTLACRARASPPATYRWKMNGTEMKLEPGSRQQLVGGNLV 96

Query: 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTCR 241
            +   +  D G Y C A+N +G V     V       E ++  +D   T +G  V+L C 
Sbjct: 97  IMNPSKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCN 156

Query: 242 VFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGTA 296
                P     W+ N+      T GR+ + + TG+L I     +D G Y+C A + +  +
Sbjct: 157 PPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFS 216

Query: 297 QGSGSLTVKEHTHITDQPEDYEVEA---------------GQSATFRCNAVSDPSLKLSI 341
             S      +   +    ED  + A               GQ  T  C A  +P  +  I
Sbjct: 217 TKS---VFSKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPR--I 271

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            W +    +D    P++  + + +L +      D G Y C A+        Q  + VQ
Sbjct: 272 KWRK----VDGSLSPQWATA-EPTLQIPSVGFEDEGTYECEAENTKGRDTVQGRIIVQ 324


>gi|45382937|ref|NP_989943.1| contactin-5 precursor [Gallus gallus]
 gi|55976559|sp|Q90W79.1|CNTN5_CHICK RecName: Full=Contactin-5; AltName: Full=F11 axonin-1-related
           protein 2; Short=FAR-2; Flags: Precursor
 gi|15216160|emb|CAC51431.1| FAR-2 protein [Gallus gallus]
          Length = 1027

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 166/612 (27%), Positives = 265/612 (43%), Gaps = 51/612 (8%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSD---RISQGNYGKSLIIKHVEFSDQG 100
           A R   V++ C   G P+P   W K +G   NPS    R SQ      L I +V+  D G
Sbjct: 239 AARGTTVKMECFALGNPVPTISWKKVNGH--NPSKARLRKSQA----VLEIPNVQLEDAG 292

Query: 101 SYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV 160
            Y C+  N  G    +   L V   P +  +         E + +ECKA+G P P   W+
Sbjct: 293 MYECKAENSRGR-NVFRGQLQVYTYPQWVEKLNDTELDSGEQLRWECKATGKPRPTYRWL 351

Query: 161 HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
            NG P+    P  R ++  + + I  +  SD G Y C A N  G +Y    + +LA AP 
Sbjct: 352 KNGVPLW---PQSRIEMINSVLMIRTVNISDAGMYQCLAENKYGTIYASAELKILASAPT 408

Query: 221 --ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDV 277
             + +  K      G+ VV+ C+   +PKP + W    K L    R TIL  G L+I + 
Sbjct: 409 FPLNQMRKTIIITKGQEVVIECKPQASPKPTITWKKGDKALRESKRVTILPQGSLRILNA 468

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
           + +D G Y+C   N  G+A+   S++VKE T I   P+  E+  G+S    C A+ D +L
Sbjct: 469 SKSDEGRYSCRGVNVFGSAEIVASVSVKEPTRIELTPKKIELTVGESIVLSCKALHDSTL 528

Query: 338 KLSIVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
            ++  W    +PIDF+ E         Q++   L +     + +G+Y CR QT  D +  
Sbjct: 529 DVTFYWTLNGQPIDFDKEDGHFESIKAQASSADLMIRNILLMHAGRYGCRVQTAADAVSD 588

Query: 393 QATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEKD- 447
           +  L V+ P   P    +++ I    A +SW+P     SP SL      Y +Q  +    
Sbjct: 589 ETELLVRGP-PGPPGVVIVEEITDTTATLSWSPGADNHSPISL------YNLQARSPFSL 641

Query: 448 GEGSIREL-IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
           G  +++ +  V  G+  +    +  P  +   RV+A N    G PS     + T E VP 
Sbjct: 642 GWQTVKTVPDVISGDMESAMAVELNPWVEYEFRVVATNKIGTGDPSAPSRMIRTNEAVPK 701

Query: 506 TVQSLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYIS 560
           T  +  +   G      + W  V  E  NG   GY + ++    +G K     E++   S
Sbjct: 702 TPPANVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSS 756

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTP 615
           D +    +   + P T + + +  Y   GDG  S  +        P   P +V+    + 
Sbjct: 757 DASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSPIVVICSAEGEPTAAPIDVKATSLSV 816

Query: 616 NNLVISWTAMPE 627
           + ++++W  + E
Sbjct: 817 SEILVAWKHIKE 828



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 163/662 (24%), Positives = 246/662 (37%), Gaps = 75/662 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS----IDL---SVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S    + L    V+      +E  F   + A
Sbjct: 180 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPYTVTA 239

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           A   TV  EC A G P P I W    K     P   R +     + I N++  D G Y C
Sbjct: 240 ARGTTVKMECFALGNPVPTISW---KKVNGHNPSKARLRKSQAVLEIPNVQLEDAGMYEC 296

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK 257
            A NS G       + V  + P+  E   D     G+ +   C+  G P+P   W+ N  
Sbjct: 297 KAENSRGRNVFRGQLQVYTY-PQWVEKLNDTELDSGEQLRWECKATGKPRPTYRWLKNGV 355

Query: 258 ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH---ITDQP 314
            L       +    L I  V  +D+G Y C A NK GT   S  L +        +    
Sbjct: 356 PLWPQSRIEMINSVLMIRTVNISDAGMYQCLAENKYGTIYASAELKILASAPTFPLNQMR 415

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           +   +  GQ     C   + P  K +I W +G + +      R       SL +  +S+ 
Sbjct: 416 KTIIITKGQEVVIECKPQASP--KPTITWKKGDKAL--RESKRVTILPQGSLRILNASKS 471

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVS------------ 422
           D G+Y+CR        E  A+++V+ P         I++   +  V+S            
Sbjct: 472 DEGRYSCRGVNVFGSAEIVASVSVKEPTRIELTPKKIELTVGESIVLSCKALHDSTLDVT 531

Query: 423 --W----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
             W     P+      GHF   K Q       +  IR +++         V     A  +
Sbjct: 532 FYWTLNGQPIDFDKEDGHFESIKAQA---SSADLMIRNILLMHAGRYGCRVQTAADAVSD 588

Query: 477 FARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS--SAFYLKWVKPEQPNGVL 534
              +L       GPP  +I     E +  T  +L   P     S   L  ++   P    
Sbjct: 589 ETELLVRGPP--GPPGVVIV----EEITDTTATLSWSPGADNHSPISLYNLQARSP---- 638

Query: 535 MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG--- 591
             + + +Q+VK          +P +      SA    L P  +Y   +    K G G   
Sbjct: 639 --FSLGWQTVK---------TVPDVISGDMESAMAVELNPWVEYEFRVVATNKIGTGDPS 687

Query: 592 AESKYLF---YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
           A S+ +     VP   P NV GR    + LVI+W  + E   N   F Y + +R + T  
Sbjct: 688 APSRMIRTNEAVPKTPPANVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT-R 746

Query: 649 AWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGS-IRELIVNKGESTTTE 705
            W +  V     S+ +  ++  P   P+E+KV     + DG  S I  +   +GE T   
Sbjct: 747 GWKEKMVTSSDASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSPIVVICSAEGEPTAAP 806

Query: 706 VD 707
           +D
Sbjct: 807 ID 808



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 155/697 (22%), Positives = 274/697 (39%), Gaps = 72/697 (10%)

Query: 36  QYVTRKKEVALRN-KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV 94
           Q+V +  +  L + +++   C   G P P   W K+GVP+ P  RI   N    L+I+ V
Sbjct: 318 QWVEKLNDTELDSGEQLRWECKATGKPRPTYRWLKNGVPLWPQSRIEMIN--SVLMIRTV 375

Query: 95  EFSDQGSYTCEVSNGVGEAKSYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASG 151
             SD G Y C   N  G   + S +L +LA AP F +    + I   + + V  ECK   
Sbjct: 376 NISDAGMYQCLAENKYGTIYA-SAELKILASAPTFPLNQMRKTIIITKGQEVVIECKPQA 434

Query: 152 LPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDV 210
            P+P I W    K + ++    R  + P   + I N  KSD G Y C   N  G    ++
Sbjct: 435 SPKPTITWKKGDKALRESK---RVTILPQGSLRILNASKSDEGRYSCRGVNVFGSA--EI 489

Query: 211 YVNVLAHAP-EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVN--WIHNQKELT----GGR 263
             +V    P  I   PK      G+++VL+C+       +V   W  N + +      G 
Sbjct: 490 VASVSVKEPTRIELTPKKIELTVGESIVLSCKALHDSTLDVTFYWTLNGQPIDFDKEDGH 549

Query: 264 YTILE----TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK-----EHTHITDQP 314
           +  ++    + DL I ++    +G Y C  +           L V+         I ++ 
Sbjct: 550 FESIKAQASSADLMIRNILLMHAGRYGCRVQTAADAVSDETELLVRGPPGPPGVVIVEEI 609

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVT 369
            D       +AT   +  +D    +S+  L+   P        ++ P  +  +  S    
Sbjct: 610 TD------TTATLSWSPGADNHSPISLYNLQARSPFSLGWQTVKTVPDVISGDMESAMAV 663

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTV-----QVPLEAPSNFTLIQVIDAKKAVVSWN 424
           + +     ++   A  ++   +  A   +      VP   P+N +  +     + V++W 
Sbjct: 664 ELNPWVEYEFRVVATNKIGTGDPSAPSRMIRTNEAVPKTPPANVSG-RSGRRHELVIAWE 722

Query: 425 PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF-ARVLAF 483
           PVS +   G   GY V  +      G   +++ +   S     D+ VP    F  +V  +
Sbjct: 723 PVSEEFQNGEGFGYIV-AFRPNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEVKVGVY 781

Query: 484 NGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
           N   +GP S I+   + EG P      ++A  L  S   + W   ++  G   G++I Y 
Sbjct: 782 NNKGDGPFSPIVVICSAEGEPTAAPIDVKATSLSVSEILVAWKHIKESLGRPQGFEIGYW 841

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF 602
             K  +     E++    +   +S  L GLE +T Y + +  Y  AG G  S  +     
Sbjct: 842 --KDMEQEEAAEKVKTAGN--ESSLLLTGLEGNTLYHLTVRAYNAAGYGPPSTAVRVATK 897

Query: 603 KNPDNVEGRGSTPNNLV---------ISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQD 653
           K+P +       P+N++         + W  +  + + +    Y++  R+    E  +  
Sbjct: 898 KSPPS-----QAPSNVMWIQDGSHVSLGWEPVRPLANESEVMGYKVLLRQ----EGQSNS 948

Query: 654 DVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGS 690
            V++ +++  V+   P    Y I+V       DG  S
Sbjct: 949 QVIETQKTSAVVI-LPDVGVYIIEVCAVSEGGDGTAS 984



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 150/387 (38%), Gaps = 38/387 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV L C   G+P P   W ++G  I+            SLII +  E  D G Y C  +
Sbjct: 44  KKVSLNCQAHGSPTPTYRWLRNGTEIDVESDYRYSLIEGSLIISNPNEMKDSGQYQCLTT 103

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPEPEI--HWVHNGK 164
           N  G   S    L       F+      ++  E + V   C +  L  PEI   WV N  
Sbjct: 104 NMFGSILSREAVLQFAYLGNFSGRTRSAVSVREGQGVVLMC-SPPLHSPEIIYSWVFNEF 162

Query: 165 PISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           P S    + RR +      + I  ++ SD G+Y C   N++          VL+    +T
Sbjct: 163 P-SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV------TNARVLSPPTPLT 215

Query: 223 ---------EAPKDE----YTVD---GKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
                      PK E    YTV    G TV + C   G P P ++W              
Sbjct: 216 LRNDGVMGEYEPKIEVHFPYTVTAARGTTVKMECFALGNPVPTISWKKVNGHNPSKARLR 275

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
                L+I +V   D+G Y C A N  G     G L V  +    ++  D E+++G+   
Sbjct: 276 KSQAVLEIPNVQLEDAGMYECKAENSRGRNVFRGQLQVYTYPQWVEKLNDTELDSGEQLR 335

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + C A   P  + +  WL+   P+  +S    + S     TV  S   D+G Y C A+ +
Sbjct: 336 WECKATGKP--RPTYRWLKNGVPLWPQSRIEMINSVLMIRTVNIS---DAGMYQCLAENK 390

Query: 387 LDFIEAQATLTVQVPLEAPSNFTLIQV 413
              I A A L +   L +   F L Q+
Sbjct: 391 YGTIYASAELKI---LASAPTFPLNQM 414



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 118/285 (41%), Gaps = 27/285 (9%)

Query: 121 SVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
           SV   P F  EP+   F   +EE+ V+  C+A G P P   W+ NG  I     + R  +
Sbjct: 21  SVDYGPVFVQEPDDVIFPTDSEEKKVSLNCQAHGSPTPTYRWLRNGTEI-DVESDYRYSL 79

Query: 178 GPNRITIENLRK-SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKT 235
               + I N  +  D+G Y C  TN  G +     V   A+    +   +   +V +G+ 
Sbjct: 80  IEGSLIISNPNEMKDSGQYQCLTTNMFGSILSREAVLQFAYLGNFSGRTRSAVSVREGQG 139

Query: 236 VVLTCR-VFGAPKPEVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFAR 290
           VVL C     +P+   +W+ N+          R+   ETG+L I+ V  +D G Y C  +
Sbjct: 140 VVLMCSPPLHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVK 199

Query: 291 NKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATFRCNAVSDPSLKL 339
           N +  A+       LT++    + +     EV          G +    C A+ +P   +
Sbjct: 200 NTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPYTVTAARGTTVKMECFALGNPVPTI 259

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           S   + G  P    S+ R  +S    L +      D+G Y C+A+
Sbjct: 260 SWKKVNGHNP----SKARLRKSQAV-LEIPNVQLEDAGMYECKAE 299


>gi|444727037|gb|ELW67545.1| Contactin-3 [Tupaia chinensis]
          Length = 996

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 174/639 (27%), Positives = 274/639 (42%), Gaps = 48/639 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P   S +I Q  +   L I + +  D GSY 
Sbjct: 239 AAKGSTVKLECFALGNPVPQINWRRSDGLPF--SSKIKQRKFNGVLEIPNFQQDDAGSYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    + +  A E+ + +EC+ASG P+P   W+ NG
Sbjct: 297 CIAENSRGKNVARG-RLTYYAKPHWVQLIKDVEIAVEDNLYWECRASGKPKPSYRWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + +       R ++    ITI NL  +D+G + C A N  G VY    + V+A AP+ ++
Sbjct: 356 EALVL---EERIQIENGAITISNLNVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSK 412

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
            P  +      G  V L C+   +P+   +W   +  +    R T L+ G LKI +V  A
Sbjct: 413 NPMKKLVQVQVGSLVSLDCKPRASPRALSSWKKGEVAVQEHERITFLKDGGLKIANVTKA 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L + 
Sbjct: 473 DTGSYTCTAENQFGKANGTTLLVVTEPTKITLAPSNMDVSVGESVILPCQVQHDPLLDIM 532

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ E    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 533 FTWYFNGALTDFKKEGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADL 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
            V+     P N  + ++ D   A +SW       +PV   S++       G++  T    
Sbjct: 593 IVRGSPGPPENVKVDEITDT-TAQLSWKEGTDNHSPVISYSIQARTPFSVGWQTVT---- 647

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E I   G + T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 648 ----TVPETI--DGRTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S  +   GS S   + W  V  E  NG   GY + ++ +  T     ++ +    D 
Sbjct: 702 VPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTN---WIQTVVTSPDT 758

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y++ +  Y   G+G  S    +F     P   P  V     + + 
Sbjct: 759 PRYVFRNESIMPFSPYQVKVGVYNNKGEGPFSPVTTVFSAEEEPTIAPSQVSANSLSSSE 818

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FWRRHNTGEAWNQDDV 655
           + +SW  +P    N     Y + +W      E+ N+  V
Sbjct: 819 IKVSWNTIPWKLSNGHLLGYEVRYWNDGGEEESSNKVKV 857



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 157/618 (25%), Positives = 240/618 (38%), Gaps = 48/618 (7%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V   +       ++           P   V+ PE + AA
Sbjct: 181 LYIAKVESSDVGNYTCVVTSTVTNTRVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 240

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P S      +RK     + I N ++ D G+Y C
Sbjct: 241 KGSTVKLECFALGNPVPQINWRRSDGLPFSSKI--KQRKFN-GVLEIPNFQQDDAGSYEC 297

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K+V    L +   P   +  KD        +   CR  G PKP   W+ N
Sbjct: 298 IAENSRG---KNVARGRLTYYAKPHWVQLIKDVEIAVEDNLYWECRASGKPKPSYRWLKN 354

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
            + L       +E G + I+++   DSG + C A NK G    S  L  V      +  P
Sbjct: 355 GEALVLEERIQIENGAITISNLNVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNP 414

Query: 315 ED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
                +V+ G   +  C   + P    S  W +G   +  +   R     D  L +   +
Sbjct: 415 MKKLVQVQVGSLVSLDCKPRASPRALSS--WKKGE--VAVQEHERITFLKDGGLKIANVT 470

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQ 429
           + D+G YTC A+ +         L V  P +   APSN   + V   +  ++        
Sbjct: 471 KADTGSYTCTAENQFGKANGTTLLVVTEPTKITLAPSN---MDVSVGESVILPCQVQHDP 527

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
            L   F  Y     T+   EGS  E +   G S+   + + +    +   V       + 
Sbjct: 528 LLDIMFTWYFNGALTDFKKEGSHFEKV--GGSSSGDLMIRNIQLKHSGKYVCMVQTGVDS 585

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
             S     V   G PG  ++++   +  +   L W +    +  ++ Y I  Q+     V
Sbjct: 586 VSSAADLIV--RGSPGPPENVKVDEITDTTAQLSWKEGTDNHSPVISYSI--QARTPFSV 641

Query: 550 G-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPF 602
           G   +  +P   D  T +A +  L P  +Y   +    K G G  S      +    VP 
Sbjct: 642 GWQTVTTVPETIDGRTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
             P  V G G + + LVI+W  +PE   N   F Y + +R       W Q  V       
Sbjct: 702 VPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTN-WIQTVVTSPDTPR 760

Query: 663 LVLANQPT--FQPYEIKV 678
            V  N+    F PY++KV
Sbjct: 761 YVFRNESIMPFSPYQVKV 778



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 155/692 (22%), Positives = 265/692 (38%), Gaps = 100/692 (14%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +   +RI   N   ++ I ++  +D G + C   N  G   
Sbjct: 339 CRASGKPKPSYRWLKNGEALVLEERIQIEN--GAITISNLNVTDSGMFQCIAENKHGLVY 396

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           S S +L V+A AP F+  P  + +       V+ +CK    P     W      + +   
Sbjct: 397 S-SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRALSSWKKGEVAVQEHER 455

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
               K G   + I N+ K+DTG+Y C A N  G       + V+    +IT AP +    
Sbjct: 456 ITFLKDG--GLKIANVTKADTGSYTCTAENQFGKANGTTLL-VVTEPTKITLAPSNMDVS 512

Query: 232 DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
            G++V+L C+V   P  ++   W  N             E  GG      +GDL I ++ 
Sbjct: 513 VGESVILPCQVQHDPLLDIMFTWYFNGALTDFKKEGSHFEKVGGS----SSGDLMIRNIQ 568

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
              SG+Y C  +  + +   +  L V+                G     + + ++D + +
Sbjct: 569 LKHSGKYVCMVQTGVDSVSSAADLIVRG-------------SPGPPENVKVDEITDTTAQ 615

Query: 339 LSIVWLRGSEP----IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA-----QTELDF 389
           LS  W  G++     I +  + R   S  +    T    +D   +T          E +F
Sbjct: 616 LS--WKEGTDNHSPVISYSIQARTPFSVGWQTVTTVPETIDGRTHTATVVELNPWVEYEF 673

Query: 390 --------------IEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH- 434
                         + ++   T +   E P +          + V++W+PV  +   G  
Sbjct: 674 RVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEG 733

Query: 435 ------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
                 FR   V  W +           V + ES        +P S    +V  +N    
Sbjct: 734 FGYVVAFRPLGVTNWIQTVVTSPDTPRYVFRNES-------IMPFSPYQVKVGVYNNKGE 786

Query: 489 GPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
           GP S + +  + E  P    S + A  L SS   + W  +  +  NG L+GY+++Y +  
Sbjct: 787 GPFSPVTTVFSAEEEPTIAPSQVSANSLSSSEIKVSWNTIPWKLSNGHLLGYEVRYWNDG 846

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV----- 600
           G +      ++        TS +L GL+ +  Y   +  Y  AG G  S  +        
Sbjct: 847 GEEESSNKVKVA----GNETSTRLQGLKSNLAYYTAVRAYNSAGAGPFSATVNATTKKTP 902

Query: 601 PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ 660
           P + P NV    +T   ++++W  +  +E+ +    Y++F+R  +     N   VL+  +
Sbjct: 903 PSQPPGNVVWN-ATETKVLLNWEQVKAMENESEVTGYKVFYRTSSQ----NNMQVLNTNK 957

Query: 661 S--ELVLANQPTFQPYEIKVVQTWTEKDGEGS 690
           +  EL+L   P  + Y I+V  T    DG  S
Sbjct: 958 TSAELLL---PIKEDYIIEVKATTDGGDGTSS 986



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 149/375 (39%), Gaps = 30/375 (8%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFSDQGSY 102
           V   +KKV L C   G P P   W  +G  I+ S +   + N G  ++       D GSY
Sbjct: 39  VGSEDKKVTLNCEARGNPSPHYRWQLNGSDIDMSLEHHYKLNGGNLVVFNPNRNWDTGSY 98

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEI 157
            C  +N +G   S    L       F T     ++  E + V   C   G P    E   
Sbjct: 99  QCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLC---GPPPHSGELSY 155

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LG----Y 205
            W+ N  P S    + RR V      + I  +  SD GNY C  T++      LG     
Sbjct: 156 AWIFNEYP-SFVEEDSRRFVSQETGHLYIAKVESSDVGNYTCVVTSTVTNTRVLGSPTPL 214

Query: 206 VYKDVYVNVLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRY 264
           V +   V +  + P+I  + P+      G TV L C   G P P++NW  +       + 
Sbjct: 215 VLRSDGV-MGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKI 273

Query: 265 TILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQ 323
              +  G L+I +    D+G Y C A N  G     G LT     H     +D E+    
Sbjct: 274 KQRKFNGVLEIPNFQQDDAGSYECIAENSRGKNVARGRLTYYAKPHWVQLIKDVEIAVED 333

Query: 324 SATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +  + C A   P  K S  WL+  E +  E     +Q  + ++T++  +  DSG + C A
Sbjct: 334 NLYWECRASGKP--KPSYRWLKNGEALVLEER---IQIENGAITISNLNVTDSGMFQCIA 388

Query: 384 QTELDFIEAQATLTV 398
           + +   + + A L V
Sbjct: 389 ENKHGLVYSSAELKV 403



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 123/300 (41%), Gaps = 32/300 (10%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +E++ VT  C+A G P P   W  NG  I  +  +  +  G
Sbjct: 22  LLQGPVFIKEPSNSIFPVGSEDKKVTLNCEARGNPSPHYRWQLNGSDIDMSLEHHYKLNG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N +     R  DTG+Y C ATNSLG +         A+        +   +V +G+ VV
Sbjct: 82  GNLVVFNPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        WI N+     E    R+   ETG L I  V  +D G YTC 
Sbjct: 142 LLC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVESSDVGNYTCV 197

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
             + +   +  GS   L ++    + +         PE      G +    C A+ +P  
Sbjct: 198 VTSTVTNTRVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +++  W R S+ + F S+ +  + N   L +    + D+G Y C A+       A+  LT
Sbjct: 258 QIN--WRR-SDGLPFSSKIKQRKFNGV-LEIPNFQQDDAGSYECIAENSRGKNVARGRLT 313



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 134/590 (22%), Positives = 219/590 (37%), Gaps = 70/590 (11%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
           V L C    +P   + W K  V +   +RI+    G  L I +V  +D GSYTC   N  
Sbjct: 427 VSLDCKPRASPRALSSWKKGEVAVQEHERITFLKDG-GLKIANVTKADTGSYTCTAENQF 485

Query: 111 GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--WVHNGKPIS- 167
           G+A   ++ L V      T+ P  ++ +  E+V   C+    P  +I   W  NG     
Sbjct: 486 GKANGTTL-LVVTEPTKITLAPSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGALTDF 544

Query: 168 QAPPNPRRKVGPNR---ITIENLRKSDTGNYGCNATNSLGYVYK--DVYVNVLAHAPEIT 222
           +   +   KVG +    + I N++   +G Y C     +  V    D+ V      PE  
Sbjct: 545 KKEGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENV 604

Query: 223 EAPKDEYT-----------VDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILET 269
           +   DE T            D  + V++  +       V W  +    E   GR     T
Sbjct: 605 KV--DEITDTTAQLSWKEGTDNHSPVISYSIQARTPFSVGWQTVTTVPETIDGR-----T 657

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGS-GSLTVKEHTHITDQPEDYEVEAGQSATFR 328
               + ++      E+   A NK+G  + S  S  V+    + + P   EV  G  +   
Sbjct: 658 HTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPS-EVSGGGGSRSE 716

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
                DP  +     L+  E   +    R +   ++  TV  S   D+ +Y  R ++ + 
Sbjct: 717 LVITWDPVPEE----LQNGEGFGYVVAFRPLGVTNWIQTVVTSP--DTPRYVFRNESIMP 770

Query: 389 FIEAQATLTV-------------------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQ 429
           F   Q  + V                   + P  APS  +    + + +  VSWN +  +
Sbjct: 771 FSPYQVKVGVYNNKGEGPFSPVTTVFSAEEEPTIAPSQVS-ANSLSSSEIKVSWNTIPWK 829

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
              GH  GY+V+ W +   E S  ++ V  G  T+T +         +  V A+N A  G
Sbjct: 830 LSNGHLLGYEVRYWNDGGEEESSNKVKV-AGNETSTRLQGLKSNLAYYTAVRAYNSAGAG 888

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT 547
           P S  ++  T +  P             +   L W  VK  +    + GYK+ Y++    
Sbjct: 889 PFSATVNATTKKTPPSQPPGNVVWNATETKVLLNWEQVKAMENESEVTGYKVFYRTSSQN 948

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL 597
            +  L        +   TSA+L  L     Y I +   T  GDG  S+ +
Sbjct: 949 NMQVL--------NTNKTSAELL-LPIKEDYIIEVKATTDGGDGTSSEQI 989


>gi|348510467|ref|XP_003442767.1| PREDICTED: contactin-4-like [Oreochromis niloticus]
          Length = 1029

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 183/725 (25%), Positives = 302/725 (41%), Gaps = 99/725 (13%)

Query: 47  RNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           +   V+L C   G P P   W + D VP     ++        L I + +  D G+Y C 
Sbjct: 244 KGSTVKLECFALGNPAPSISWRRVDNVPF--PRKVDMRKASGVLEIPYFQQEDAGTYECV 301

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             N  G   +    LS  A P+    P+ +    ++++ +ECKA+G P+P   W+ NG+ 
Sbjct: 302 AENSRG-MNTVKGKLSFYAPPHLIETPQDVQKLIDDSLAWECKATGKPKPSYRWMKNGEN 360

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +       R +V    ++I  L  +DTG Y C A N  G VY +  + V+A AP+ +   
Sbjct: 361 LEST--EERIQVASGVLSISRLTLTDTGMYQCVAGNKHGEVYSNAELRVIAVAPDFSHNQ 418

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADS 282
               T+   G   ++ C+   +P   ++W    + L    R +IL+ G L+I +V  +D+
Sbjct: 419 LRSQTLVKVGGDALVECKPKMSPWGVISWRKGSEPLQETDRISILDNGSLRIWNVTKSDA 478

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC ARN+ G A  +GS+ VKE T IT      +V  G+S    C    DPSL+L   
Sbjct: 479 GLYTCVARNQFGVASSTGSIIVKEPTVITTLASTLDVTVGESVVLPCQVSHDPSLELKFT 538

Query: 343 WLRGSEPIDFESEPRF---VQSNDYSLTVTKSSEL-DSGQYTCRAQTELDFIEAQATLTV 398
           W    + I F S   F   V  +     + ++ +L  +G+YTC  QT++D I     L V
Sbjct: 539 WFFNEQLIHFGSHGGFFEKVGGHSAGDIMIRNVQLRHAGKYTCAVQTKVDSISVAVDLVV 598

Query: 399 QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSIRE 454
           + P   P++  +  + D   A +SW P  P +       Y +Q  T          ++ E
Sbjct: 599 RGPPGPPTSIQVEGITDT-TASLSWRP-GPDN-HSPITAYTIQARTPFSLGWQAVTTVPE 655

Query: 455 LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE---------IISFVTPEGVPG 505
           ++  +G   T  V    P  +   RVLA N    G PS+             VTP  V G
Sbjct: 656 VV--RGTRLTATVIDLSPWVEYEFRVLASNSIGTGEPSKPSKQARTKGTSPKVTPANVSG 713

Query: 506 TVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
              S        S   + W  V  E  NG   GY + ++    T  G +   +P  ++ +
Sbjct: 714 GGGS-------RSELVITWEPVPEELQNGPGFGYVVAFRPHGAT--GWMQAAVPS-AEAS 763

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDG----------AESKYLFYVPFKNPDNVEGRGS 613
               K   ++P + +++ +  Y   G+G          AE +     P + P  V  +  
Sbjct: 764 RYVFKNESIQPFSPFQVKVGVYNNLGEGPFGPVTTIYSAEEE-----PGRAPTRVRAKSL 818

Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
           + + + +SW A+P                       WN              AN+     
Sbjct: 819 SASEIEVSWKALP-----------------------WN--------------ANKKRVLG 841

Query: 674 YEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 733
           YE++   + +E++   S++  +   G  T+T +     ++  +  V A+N A  GPPS  
Sbjct: 842 YELR-YWSRSEREDTASVQRTV---GNQTSTIIRGVKGSTAYYVSVRAYNTAGTGPPSTT 897

Query: 734 ISFVT 738
           ++  T
Sbjct: 898 VNVTT 902



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 163/638 (25%), Positives = 247/638 (38%), Gaps = 85/638 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V + +       ++           P   V+ PE ++ 
Sbjct: 183 NLYIAKVEPSDVGNYTCVVTNTVTKTRVQGPPTPLVLRSDGVMGEYEPKIEVQFPELVHV 242

Query: 138 AEEETVTFECKASGLPEPEIHW--VHNGKPISQAPPNPRR---KVGPNRITIENLRKSDT 192
           A+  TV  EC A G P P I W  V N        P PR+   +     + I   ++ D 
Sbjct: 243 AKGSTVKLECFALGNPAPSISWRRVDN-------VPFPRKVDMRKASGVLEIPYFQQEDA 295

Query: 193 GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNW 252
           G Y C A NS G       ++  A  P + E P+D   +   ++   C+  G PKP   W
Sbjct: 296 GTYECVAENSRGMNTVKGKLSFYA-PPHLIETPQDVQKLIDDSLAWECKATGKPKPSYRW 354

Query: 253 IHNQKELTGGRYTI-LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK------ 305
           + N + L      I + +G L I+ +   D+G Y C A NK G    +  L V       
Sbjct: 355 MKNGENLESTEERIQVASGVLSISRLTLTDTGMYQCVAGNKHGEVYSNAELRVIAVAPDF 414

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
            H  +  Q     V+ G  A   C     P   +S  W +GSEP+  +   R    ++ S
Sbjct: 415 SHNQLRSQ---TLVKVGGDALVECKPKMSPWGVIS--WRKGSEPL--QETDRISILDNGS 467

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           L +   ++ D+G YTC A+ +     +  ++ V+ P    +  + + V   +  V+    
Sbjct: 468 LRIWNVTKSDAGLYTCVARNQFGVASSTGSIIVKEPTVITTLASTLDVTVGESVVLPCQV 527

Query: 426 VSPQSLR--------------GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFV 471
               SL               G   G+  +      G+  IR + +      T  V   V
Sbjct: 528 SHDPSLELKFTWFFNEQLIHFGSHGGFFEKVGGHSAGDIMIRNVQLRHAGKYTCAVQTKV 587

Query: 472 PASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSL--EAIPLGSSAFYLKWVKPEQ 529
             S + A  L   G   GPP+ I      EG+  T  SL     P   S      ++   
Sbjct: 588 -DSISVAVDLVVRGP-PGPPTSI----QVEGITDTTASLSWRPGPDNHSPITAYTIQART 641

Query: 530 PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           P      + + +Q+V           +P +   T  +A +  L P  +Y   +      G
Sbjct: 642 P------FSLGWQAVT---------TVPEVVRGTRLTATVIDLSPWVEYEFRVLASNSIG 686

Query: 590 DGAESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  SK           P   P NV G G + + LVI+W  +PE   N P F Y + +R 
Sbjct: 687 TGEPSKPSKQARTKGTSPKVTPANVSGGGGSRSELVITWEPVPEELQNGPGFGYVVAFRP 746

Query: 644 HNTGEAWNQDDVLDWRQSELVLAN---QPTFQPYEIKV 678
           H     W Q  V     S  V  N   QP F P+++KV
Sbjct: 747 HG-ATGWMQAAVPSAEASRYVFKNESIQP-FSPFQVKV 782



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 149/373 (39%), Gaps = 31/373 (8%)

Query: 47  RNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCE 105
           +N++V   C   G+P P   W  +G  INP         G +L I H+ +  D G+Y C 
Sbjct: 45  KNREVVFSCEAKGSPPPMYRWRLNGTEINPKTGSHYSLSGGNLRISHLNKDQDAGTYQCL 104

Query: 106 VSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPE-----IHW 159
            SN  G   S    L+      F T     ++  E + V   C     P P        W
Sbjct: 105 ASNSFGTIVSREASLTFAYLENFKTQRRSSVSVREGQGVVLLCG----PPPHSGDLVFSW 160

Query: 160 VHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLG----------YVY 207
           + N  P +    + RR +      + I  +  SD GNY C  TN++            V 
Sbjct: 161 IFNEYP-TFVKQDTRRFISQETGNLYIAKVEPSDVGNYTCVVTNTVTKTRVQGPPTPLVL 219

Query: 208 KDVYVNVLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
           +   V +  + P+I  + P+  +   G TV L C   G P P ++W          +  +
Sbjct: 220 RSDGV-MGEYEPKIEVQFPELVHVAKGSTVKLECFALGNPAPSISWRRVDNVPFPRKVDM 278

Query: 267 LE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
            + +G L+I      D+G Y C A N  G     G L+     H+ + P+D +     S 
Sbjct: 279 RKASGVLEIPYFQQEDAGTYECVAENSRGMNTVKGKLSFYAPPHLIETPQDVQKLIDDSL 338

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P  K S  W++  E  + ES    +Q     L++++ +  D+G Y C A  
Sbjct: 339 AWECKATGKP--KPSYRWMKNGE--NLESTEERIQVASGVLSISRLTLTDTGMYQCVAGN 394

Query: 386 ELDFIEAQATLTV 398
           +   + + A L V
Sbjct: 395 KHGEVYSNAELRV 407



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 127/320 (39%), Gaps = 45/320 (14%)

Query: 121 SVLAAPYFTVEPEFI-----NAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           SVL +P FT +P  I     N  +   V F C+A G P P   W  NG  I+    +   
Sbjct: 22  SVLQSPVFTKQPGSIVYPVENVEKNREVVFSCEAKGSPPPMYRWRLNGTEINPKTGSHYS 81

Query: 176 KVGPNRITIENLRK-SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
             G N + I +L K  D G Y C A+NS G +         A+        +   +V +G
Sbjct: 82  LSGGN-LRISHLNKDQDAGTYQCLASNSFGTIVSREASLTFAYLENFKTQRRSSVSVREG 140

Query: 234 KTVVLTCRVFGAPKPE-----VNWIHNQ-----KELTGGRYTILETGDLKITDVAFADSG 283
           + VVL C     P P       +WI N+     K+ T  R+   ETG+L I  V  +D G
Sbjct: 141 QGVVLLC----GPPPHSGDLVFSWIFNEYPTFVKQDT-RRFISQETGNLYIAKVEPSDVG 195

Query: 284 EYTCFARNKLGT--AQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAV 332
            YTC   N +     QG  +  V     +  +         PE   V  G +    C A+
Sbjct: 196 NYTCVVTNTVTKTRVQGPPTPLVLRSDGVMGEYEPKIEVQFPELVHVAKGSTVKLECFAL 255

Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS--LTVTKSSELDSGQYTCRAQTELDFI 390
            +P+   SI W R    +D    PR V     S  L +    + D+G Y C A+      
Sbjct: 256 GNPA--PSISWRR----VDNVPFPRKVDMRKASGVLEIPYFQQEDAGTYECVAENSRGMN 309

Query: 391 EAQATLTVQVP---LEAPSN 407
             +  L+   P   +E P +
Sbjct: 310 TVKGKLSFYAPPHLIETPQD 329



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 87/199 (43%), Gaps = 16/199 (8%)

Query: 414  IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWT--EKDGEGSIRELIVNKGESTTTEVDKFV 471
            + A +  VSW  +   + +    GY+++ W+  E++   S++  +   G  T+T +    
Sbjct: 818  LSASEIEVSWKALPWNANKKRVLGYELRYWSRSEREDTASVQRTV---GNQTSTIIRGVK 874

Query: 472  PASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQ 529
             ++  +  V A+N A  GPPS  ++  T +  P            +S   L W  VK  +
Sbjct: 875  GSTAYYVSVRAYNTAGTGPPSTTVNVTTKKPPPSQPPGKVVWNTSNSKIILNWEQVKALE 934

Query: 530  PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
                + GYK+ Y+  + ++        P + +  TTS +LA L     Y I +  + + G
Sbjct: 935  NESEVTGYKVLYKKNRHSR--------PSVMETNTTSVELA-LPTDEDYIIQIKPFGEGG 985

Query: 590  DGAESKYLFYVPFKNPDNV 608
            +G+ S+ +       P+ V
Sbjct: 986  EGSSSRQITIPRIPGPNAV 1004


>gi|327266140|ref|XP_003217864.1| PREDICTED: contactin-4-like [Anolis carolinensis]
          Length = 1020

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 170/627 (27%), Positives = 265/627 (42%), Gaps = 50/627 (7%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V L C   G P+P   W + DG  I    R  + +    L I + +  D G Y C   N 
Sbjct: 236 VRLECFALGNPVPAISWRRADGKQIPKKARRHKSS--SILEIPNFQQEDAGLYECVAENV 293

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G   +    L+  A P +T      + A EE + +ECKA+G P+P   W+ +G+ +   
Sbjct: 294 RGRNVARG-QLTFYAPPNWTQRINDAHVAIEENIYWECKANGRPKPSYSWLKDGELLL-- 350

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
            P  R ++    +TI N+  SDTG Y C A N  G +Y    ++V+A  P+ ++      
Sbjct: 351 -PQERIQIEHGTLTITNVSLSDTGMYQCVAENRYGAIYISAELSVIAVGPDFSKNYLKRL 409

Query: 230 TVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADSGEYT 286
           T+   G    + C+   +P+P   W   ++ L    RYTI+E G LKI +V  AD+G YT
Sbjct: 410 TLVKVGGDATIECKPKASPRPTFTWKKGKEILRENERYTIMEDGTLKIINVTKADAGSYT 469

Query: 287 CFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           C A N  G A  +G+L +K+ T     P   +V AG+S    C    D  L +   W   
Sbjct: 470 CIATNHFGVASSTGNLVIKDPTRFMVAPTSMDVTAGESILLPCQVSHDHPLDIMFTWSFN 529

Query: 347 SEPIDFESE----PRFVQSNDYSLTVTKSSELD-SGQYTCRAQTELDFIEAQATLTVQVP 401
              IDFE +     R    +     + +S +L+ +G+Y C  QT +D + A A L V+ P
Sbjct: 530 GHLIDFERDGDHFERVGGQDSAGDLMIRSIQLNHAGKYVCMVQTSVDKLSAAADLIVRGP 589

Query: 402 LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSIRELIV 457
              P   T+ ++ D   A VSW P  P + R     Y VQ  T          ++ E+I 
Sbjct: 590 PGPPEAVTIDEITDT-TAQVSWRP-GPDN-RSPITTYVVQARTPFSVGWQAVNTVPEVI- 645

Query: 458 NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTPEGVPGTVQ 508
             G + T  V    P  +   RV+A +    G PS         E +  VTP  V G   
Sbjct: 646 -DGNTFTATVVGLNPWVEYEFRVVAASLIGIGEPSKPSEKRRTEEALPEVTPANVSGGGG 704

Query: 509 SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
           +        S   + W  V  E  NG   GY + ++ V        ++ +    D +   
Sbjct: 705 T-------KSELVITWETVPEELQNGGGFGYVVAFRPVGTIS---WMQTVVASPDASKYV 754

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNLVIS 621
            +   L P + Y + +  Y   G+G  S           P K P ++  R  + + + + 
Sbjct: 755 FRNESLPPFSPYEVKVGVYNNRGEGPFSHVTVVYSADEEPNKAPTSIFARSMSASEVEVF 814

Query: 622 WTAMPEIEHNAPHFKYRIFWRRHNTGE 648
           W+ +PE +       Y + + +H   E
Sbjct: 815 WSMLPETQSKGRIQGYEVRYWQHGDKE 841



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 172/641 (26%), Positives = 256/641 (39%), Gaps = 91/641 (14%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   +       ++           P   V+ PE + +
Sbjct: 171 NLYIAKVEKSDVGNYTCVVTNSVTNNRVLGPTTPLILRNDGVMGEYEPKIEVQFPEMVPS 230

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   +GK   Q P   RR    + + I N ++ D G Y 
Sbjct: 231 AKGTTVRLECFALGNPVPAISWRRADGK---QIPKKARRHKSSSILEIPNFQQEDAGLYE 287

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A N  G       +   A  P  T+   D +    + +   C+  G PKP  +W+ + 
Sbjct: 288 CVAENVRGRNVARGQLTFYA-PPNWTQRINDAHVAIEENIYWECKANGRPKPSYSWLKDG 346

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           + L       +E G L IT+V+ +D+G Y C A N+ G    S  L+V       D  ++
Sbjct: 347 ELLLPQERIQIEHGTLTITNVSLSDTGMYQCVAENRYGAIYISAELSVIAVG--PDFSKN 404

Query: 317 Y-----EVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKS 371
           Y      V+ G  AT  C   + P  + +  W +G E I  E+E R+    D +L +   
Sbjct: 405 YLKRLTLVKVGGDATIECKPKASP--RPTFTWKKGKE-ILRENE-RYTIMEDGTLKIINV 460

Query: 372 SELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNF--TLIQVIDAKKAVVSWNPV 426
           ++ D+G YTC A        +   L ++ P   + AP++   T  + I     V   +P+
Sbjct: 461 TKADAGSYTCIATNHFGVASSTGNLVIKDPTRFMVAPTSMDVTAGESILLPCQVSHDHPL 520

Query: 427 SPQ---SLRGHFRGYKVQTWTEKDGEG-------------SIRELIVNKGES----TTTE 466
                 S  GH   +      E+DG+               IR + +N          T 
Sbjct: 521 DIMFTWSFNGHLIDF------ERDGDHFERVGGQDSAGDLMIRSIQLNHAGKYVCMVQTS 574

Query: 467 VDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWV 525
           VDK   A+    R         GPP    +    E    T Q S    P   S      V
Sbjct: 575 VDKLSAAADLIVR---------GPPGPPEAVTIDEITDTTAQVSWRPGPDNRSPITTYVV 625

Query: 526 KPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
           +   P      + + +Q+V           +P + D  T +A + GL P  +Y   +   
Sbjct: 626 QARTP------FSVGWQAVN---------TVPEVIDGNTFTATVVGLNPWVEYEFRVVAA 670

Query: 586 TKAGDGAESK------YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI 639
           +  G G  SK          +P   P NV G G T + LVI+W  +PE   N   F Y +
Sbjct: 671 SLIGIGEPSKPSEKRRTEEALPEVTPANVSGGGGTKSELVITWETVPEELQNGGGFGYVV 730

Query: 640 FWRRHNTGEAWNQDDVLDWRQSELVLANQ--PTFQPYEIKV 678
            +R   T  +W Q  V     S+ V  N+  P F PYE+KV
Sbjct: 731 AFRPVGT-ISWMQTVVASPDASKYVFRNESLPPFSPYEVKV 770



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 145/366 (39%), Gaps = 22/366 (6%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  ++            SL+I +  +  D G+Y C  +
Sbjct: 35  KKVKLSCEVKGNPKPTIRWKLNGTIVDIGMDYRYSVVEGSLLINNPNKTQDAGTYQCIAT 94

Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPEIH-WVHNGKP 165
           N  G   S    L       F T     ++  + + +   C         I+ W+ N  P
Sbjct: 95  NSFGTIVSREAKLQFAYLEKFKTRTRSTVSVRQGQGMVLLCGPPPHSGELIYAWIFNEYP 154

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN---V 214
            S    + RR V      + I  + KSD GNY C  TNS      LG     +  N   +
Sbjct: 155 -SFVHQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNSVTNNRVLGPTTPLILRNDGVM 213

Query: 215 LAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILETGDL 272
             + P+I  + P+   +  G TV L C   G P P ++W   + K++         +  L
Sbjct: 214 GEYEPKIEVQFPEMVPSAKGTTVRLECFALGNPVPAISWRRADGKQIPKKARRHKSSSIL 273

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV 332
           +I +    D+G Y C A N  G     G LT     + T +  D  V   ++  + C A 
Sbjct: 274 EIPNFQQEDAGLYECVAENVRGRNVARGQLTFYAPPNWTQRINDAHVAIEENIYWECKAN 333

Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
             P  K S  WL+  E +  +     +Q    +LT+T  S  D+G Y C A+     I  
Sbjct: 334 GRP--KPSYSWLKDGELLLPQER---IQIEHGTLTITNVSLSDTGMYQCVAENRYGAIYI 388

Query: 393 QATLTV 398
            A L+V
Sbjct: 389 SAELSV 394



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 131/332 (39%), Gaps = 43/332 (12%)

Query: 116 YSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPN 172
           Y  D ++L  P F  EP    F   ++E+ V   C+  G P+P I W  NG  I     +
Sbjct: 7   YITDDNILRGPVFIQEPSSVVFALDSDEKKVKLSCEVKGNPKPTIRWKLNGT-IVDIGMD 65

Query: 173 PRRKVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
            R  V    + I N  K+ D G Y C ATNS G +         A+  +     +   +V
Sbjct: 66  YRYSVVEGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLEKFKTRTRSTVSV 125

Query: 232 -DGKTVVLTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFAD 281
             G+ +VL C     P P        WI N+          R+   ETG+L I  V  +D
Sbjct: 126 RQGQGMVLLC----GPPPHSGELIYAWIFNEYPSFVHQDNRRFVSQETGNLYIAKVEKSD 181

Query: 282 SGEYTCFARNKLGTAQGSGSLT--VKEHTHITDQ---------PEDYEVEAGQSATFRCN 330
            G YTC   N +   +  G  T  +  +  +  +         PE      G +    C 
Sbjct: 182 VGNYTCVVTNSVTNNRVLGPTTPLILRNDGVMGEYEPKIEVQFPEMVPSAKGTTVRLECF 241

Query: 331 AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS--LTVTKSSELDSGQYTCRAQTELD 388
           A+ +P   +S  W R     D +  P+  + +  S  L +    + D+G Y C A+    
Sbjct: 242 ALGNPVPAIS--WRRA----DGKQIPKKARRHKSSSILEIPNFQQEDAGLYECVAEN--- 292

Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV 420
            +  +     Q+   AP N+T  ++ DA  A+
Sbjct: 293 -VRGRNVARGQLTFYAPPNWTQ-RINDAHVAI 322


>gi|327266142|ref|XP_003217865.1| PREDICTED: contactin-6-like [Anolis carolinensis]
          Length = 1036

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 187/717 (26%), Positives = 310/717 (43%), Gaps = 86/717 (11%)

Query: 47  RNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           +   ++L C   G P+P   W + DG P+  S +IS   +   L I + +  D+ +Y C 
Sbjct: 239 KGSSIKLECFALGNPVPSISWRRIDGNPL--SRKIS--TFKGILEIPNFQQEDEATYECI 294

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             N  G   +    L + A P +    E  + +  +T  +ECKA+G P P  +W+ NG+P
Sbjct: 295 AGNVRGRNAARG-QLFIYALPEWNKGLENAHVSLYDTFMWECKATGKPMPSYYWLKNGQP 353

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +S   P  R ++    +TI  L  SD+G Y C A N  G +Y +  + V+A AP+ ++  
Sbjct: 354 LS---PEERIQIENGTLTITMLNISDSGLYQCVAENKYGSIYSNAELRVIASAPDFSKNL 410

Query: 226 KDEYTV--DGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADS 282
             + +V   G  + + C+   +PK  + W    + L    R  IL+ G LKI +V  +D+
Sbjct: 411 MKKISVVHMGGEITIECKPDASPKAAITWKKGTESLKQSKRICILDDGSLKIYNVTKSDA 470

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A N+ G A+ SG+L VKE T I   P + +V  G+S    C    DPS++++ +
Sbjct: 471 GIYTCIAMNQFGVARNSGNLIVKERTIINTPPSNMDVTVGESIVLPCQVSKDPSVEVAFI 530

Query: 343 WLRGSEPIDFESE-PRFVQSNDYSL--TVTKSSELD-SGQYTCRAQTELDFIEAQATLTV 398
           W    + IDF+ +   F ++   S+   + ++ +L+ SG+YTC  QT +D +   A + V
Sbjct: 531 WSFNGDVIDFKRKITHFERAGGESVGDLMIRNIQLNHSGKYTCTVQTAMDILSETAEIIV 590

Query: 399 QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSIRE 454
           +     P + + I+ + +  AV++W   S        + Y +QT T          ++ E
Sbjct: 591 RGTPGPPKDVS-IEHVSSTTAVLNWR--SGTDNNSPIQIYTIQTRTPFSVGWQAVSTVPE 647

Query: 455 LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLEAI 513
           +I   G + T  V    P  +   RV+A N    G PS     + T   +P    +  + 
Sbjct: 648 VI--NGRTHTATVVDLNPWVEYEFRVVAGNSVGIGEPSAPSELLRTKASIPTVAPANVSG 705

Query: 514 PLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTK----VGPLLERLPYISDPTTTS 566
             GS S   + W  +  E  NG   GY I ++ +  T     V   +E   YI       
Sbjct: 706 GGGSRSELVITWEPIPEELQNGDGFGYIIMFRPLGSTSWTKAVAASVEASKYI------- 758

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESK-YLFYV----PFKNPDNVEGRGSTPNNLVIS 621
            +   + P   + + +  +   G G  S  Y+ Y     P   P     +  + + + +S
Sbjct: 759 YRNDSITPLFPFEVKVGVFNHEGVGTLSPIYIVYSGEDEPQIAPTGASVQSISASEMEVS 818

Query: 622 WTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQT 681
           W  +                       AWN       R +  VL        YE   V  
Sbjct: 819 WNPV-----------------------AWN-------RHTGRVLG-------YE---VLY 838

Query: 682 WTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           WT+   + +  ++ V+ G  T   +    P +  FA V AFN A  GP S  ++  T
Sbjct: 839 WTDDSRDSTTSKVKVS-GNITVRNITNLKPNTLYFASVRAFNTAGTGPSSVPVNVTT 894



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 164/636 (25%), Positives = 251/636 (39%), Gaps = 84/636 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKS-----------YSIDLSVLAAPYFTVE-PEFI 135
           +L I  VE SD G+YTC V N   EAK             S  +     P   V  PE I
Sbjct: 178 NLYIAKVEPSDVGNYTCVVINT--EAKQSVQGPPTPLVLRSDGVMGEYEPKIEVRFPEAI 235

Query: 136 NAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNR--ITIENLRKSDT 192
             A+  ++  EC A G P P I W   +G P+S       RK+   +  + I N ++ D 
Sbjct: 236 QVAKGSSIKLECFALGNPVPSISWRRIDGNPLS-------RKISTFKGILEIPNFQQEDE 288

Query: 193 GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNW 252
             Y C A N  G       + + A  PE  +  ++ +     T +  C+  G P P   W
Sbjct: 289 ATYECIAGNVRGRNAARGQLFIYA-LPEWNKGLENAHVSLYDTFMWECKATGKPMPSYYW 347

Query: 253 IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD 312
           + N + L+      +E G L IT +  +DSG Y C A NK G+   +  L V     I  
Sbjct: 348 LKNGQPLSPEERIQIENGTLTITMLNISDSGLYQCVAENKYGSIYSNAELRV-----IAS 402

Query: 313 QPEDYE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDY 364
            P+  +        V  G   T  C    D S K +I W +G+E    +   R    +D 
Sbjct: 403 APDFSKNLMKKISVVHMGGEITIECKP--DASPKAAITWKKGTE--SLKQSKRICILDDG 458

Query: 365 SLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ---VPLEAPSNFTLIQVIDAKKAV- 420
           SL +   ++ D+G YTC A  +         L V+   +    PSN   + V   +  V 
Sbjct: 459 SLKIYNVTKSDAGIYTCIAMNQFGVARNSGNLIVKERTIINTPPSN---MDVTVGESIVL 515

Query: 421 ---VSWNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
              VS +P    +    F G  +      T  E+ G  S+ +L++   +       K+  
Sbjct: 516 PCQVSKDPSVEVAFIWSFNGDVIDFKRKITHFERAGGESVGDLMIRNIQ--LNHSGKYTC 573

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
             +    +L+         +EII      G PG  + +    + S+   L W      N 
Sbjct: 574 TVQTAMDILS-------ETAEIIV----RGTPGPPKDVSIEHVSSTTAVLNWRSGTDNNS 622

Query: 533 VLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            +  Y I  Q+     VG   +  +P + +  T +A +  L P  +Y   +      G G
Sbjct: 623 PIQIYTI--QTRTPFSVGWQAVSTVPEVINGRTHTATVVDLNPWVEYEFRVVAGNSVGIG 680

Query: 592 ---AESKYL---FYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
              A S+ L     +P   P NV G G + + LVI+W  +PE   N   F Y I +R   
Sbjct: 681 EPSAPSELLRTKASIPTVAPANVSGGGGSRSELVITWEPIPEELQNGDGFGYIIMFRPLG 740

Query: 646 TGEAWNQDDVLDWRQSELVLANQ---PTFQPYEIKV 678
           +  +W +        S+ +  N    P F P+E+KV
Sbjct: 741 S-TSWTKAVAASVEASKYIYRNDSITPLF-PFEVKV 774



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 150/692 (21%), Positives = 262/692 (37%), Gaps = 124/692 (17%)

Query: 28  QNRHAPKQQ---YVTRKKEVALRNKKVELF------CIFGGTPLPQTIWSKDGVPINPSD 78
           + R+A + Q   Y   +    L N  V L+      C   G P+P   W K+G P++P +
Sbjct: 299 RGRNAARGQLFIYALPEWNKGLENAHVSLYDTFMWECKATGKPMPSYYWLKNGQPLSPEE 358

Query: 79  RISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV----EPEF 134
           RI   N   +L I  +  SD G Y C   N  G   S +    + +AP F+     +   
Sbjct: 359 RIQIEN--GTLTITMLNISDSGLYQCVAENKYGSIYSNAELRVIASAPDFSKNLMKKISV 416

Query: 135 INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRK--VGPNRITIENLRKSDT 192
           ++   E  +T ECK    P+  I W    + + Q+    +R   +    + I N+ KSD 
Sbjct: 417 VHMGGE--ITIECKPDASPKAAITWKKGTESLKQS----KRICILDDGSLKIYNVTKSDA 470

Query: 193 GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVN 251
           G Y C A N  G        N++     I   P     V  G+++VL C+V   P  EV 
Sbjct: 471 GIYTCIAMNQFGVARNSG--NLIVKERTIINTPPSNMDVTVGESIVLPCQVSKDPSVEVA 528

Query: 252 WIHN-------------QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
           +I +               E  GG       GDL I ++    SG+YTC  +  +     
Sbjct: 529 FIWSFNGDVIDFKRKITHFERAGGE----SVGDLMIRNIQLNHSGKYTCTVQTAMDILSE 584

Query: 299 SGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSDPSLKLSIVWLRGSEPIDF---- 352
           +  + V+        P+D  +E   S T   N  + +D +  + I  ++   P       
Sbjct: 585 TAEIIVR---GTPGPPKDVSIEHVSSTTAVLNWRSGTDNNSPIQIYTIQTRTPFSVGWQA 641

Query: 353 -ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA-----TLTVQVPLEAPS 406
             + P  +    ++ TV   +     ++   A   +   E  A          +P  AP+
Sbjct: 642 VSTVPEVINGRTHTATVVDLNPWVEYEFRVVAGNSVGIGEPSAPSELLRTKASIPTVAPA 701

Query: 407 NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-------TWTEKDGEGSIRELIVNK 459
           N +        + V++W P+  +   G   GY +        +WT              K
Sbjct: 702 NVSGGGG-SRSELVITWEPIPEELQNGDGFGYIIMFRPLGSTSWT--------------K 746

Query: 460 GESTTTEVDKFVPASKNFARVLAFN---GAYN----GPPSEIISFVTPEGVP------GT 506
             + + E  K++  + +   +  F    G +N    G  S I    + E  P       +
Sbjct: 747 AVAASVEASKYIYRNDSITPLFPFEVKVGVFNHEGVGTLSPIYIVYSGEDEPQIAPTGAS 806

Query: 507 VQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
           VQS+ A  +  S   + W    +  G ++GY++ Y +                 D TT+ 
Sbjct: 807 VQSISASEMEVSWNPVAW---NRHTGRVLGYEVLYWTDDS-------------RDSTTSK 850

Query: 567 AKLAG---------LEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRG 612
            K++G         L+P+T Y   +  +  AG G  S  +        P + P N+  + 
Sbjct: 851 VKVSGNITVRNITNLKPNTLYFASVRAFNTAGTGPSSVPVNVTTRKSPPSQRPANIAWK- 909

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
            T + + ++W  +  +E+ +    Y+I +R++
Sbjct: 910 LTNSKICLNWEHVKTMENESQVLGYKILYRQN 941



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 99/283 (34%), Gaps = 34/283 (12%)

Query: 125 APYFTVEP---EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P F  EP    +   +E+  V   C   G P P   W  NG  I        R  G + 
Sbjct: 23  GPIFIQEPFDVTYSVNSEDPEVILNCTGRGRPSPFYRWKRNGTDIDLTMSYHYRLDGGSL 82

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTC 240
                 +K D G Y C  TNS G +         A+        +   +V +G+ VVL C
Sbjct: 83  AINNPHKKQDIGTYQCLVTNSFGTILSRKAKLQFAYLENFETKARSTVSVREGQGVVLLC 142

Query: 241 RVFGAPKPE-----VNWIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCFARN 291
                P P        WI N   L       R+   ETG+L I  V  +D G YTC   N
Sbjct: 143 ----GPPPHHGDLSYAWIFNDNPLYVQEDSRRFVSQETGNLYIAKVEPSDVGNYTCVVIN 198

Query: 292 KLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSLKLS 340
                + QG  +  V     +  +         PE  +V  G S    C A+ +P    S
Sbjct: 199 TEAKQSVQGPPTPLVLRSDGVMGEYEPKIEVRFPEAIQVAKGSSIKLECFALGNPV--PS 256

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           I W R    ID     R + +    L +    + D   Y C A
Sbjct: 257 ISWRR----IDGNPLSRKISTFKGILEIPNFQQEDEATYECIA 295



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 15/198 (7%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P  AP+  + +Q I A +  VSWNPV+     G   GY+V  WT+   + +  ++ V+ G
Sbjct: 798 PQIAPTGAS-VQSISASEMEVSWNPVAWNRHTGRVLGYEVLYWTDDSRDSTTSKVKVS-G 855

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
             T   +    P +  FA V AFN A  GP S  ++  T +  P    +  A  L +S  
Sbjct: 856 NITVRNITNLKPNTLYFASVRAFNTAGTGPSSVPVNVTTRKSPPSQRPANIAWKLTNSKI 915

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STK 577
            L W  VK  +    ++GYKI Y+  +        +   +I +   TSA+L  L P    
Sbjct: 916 CLNWEHVKTMENESQVLGYKILYRQNR--------QSTTHILETNNTSAEL--LVPFEED 965

Query: 578 YRIHLAGYTKAGDGAESK 595
           Y I +   +  G+G+ S+
Sbjct: 966 YLIEIRTMSDGGEGSSSE 983


>gi|355559495|gb|EHH16223.1| Brain-derived immunoglobulin superfamily protein 2 [Macaca mulatta]
 gi|355746563|gb|EHH51177.1| Brain-derived immunoglobulin superfamily protein 2 [Macaca
           fascicularis]
          Length = 1026

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 191/727 (26%), Positives = 296/727 (40%), Gaps = 112/727 (15%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P  IW + DG PI    R  + N    L I + +  D G Y C   N 
Sbjct: 243 VKLECFALGNPVPTIIWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGLYECVAENS 300

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P +  +   I+ A EE V +ECKA+G P+P   W+ NG+P+   
Sbjct: 301 RGKNVARG-QLTFYAQPNWIQKINDIHVAMEENVFWECKANGRPKPTYRWLKNGEPLLT- 358

Query: 170 PPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
               R ++    G   ITI NL  SD G Y C A N  G ++ +  ++V+A  P+ +   
Sbjct: 359 ----RDRIQIEQGTLNITIVNL--SDAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTL 412

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADS 282
               T+   G  VV+ C+   +PKP   W   +  L    R TI E G+L+I +V  +D+
Sbjct: 413 LKRITLVKVGGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDA 472

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   
Sbjct: 473 GSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFT 532

Query: 343 WLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           W      IDF+ +         Q +   L +       +G+Y C  QT +D + A A L 
Sbjct: 533 WSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLI 592

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGE 449
           V+ P   P   T+ ++ D   A +SW P     SP ++      Y +Q  T         
Sbjct: 593 VRGPPGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFSVGWQAV 645

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTP 500
            ++ ELI   G++ T  V    P  +   R +A N    G PS         E +  VTP
Sbjct: 646 NTVPELI--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTP 703

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
             V G   S        S   + W  V  E  NG   GY + ++       G ++  L  
Sbjct: 704 ANVSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFR-----PYGKMIWMLTV 751

Query: 559 I--SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGR 611
           +  +D +    +   + P + + + +  +   G+G  S           P K P ++  R
Sbjct: 752 LASADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFAR 811

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
             +  ++ + W +  E                                       N+   
Sbjct: 812 SLSATDIEVFWASPLE--------------------------------------KNRGRI 833

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
           Q YE+K    W  +D E + R+ I   G  T+T++     ++     V A+N A  GP S
Sbjct: 834 QGYEVKY---WRHEDKEENARK-IRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPSS 889

Query: 732 EIISFVT 738
             ++  T
Sbjct: 890 ATVNVTT 896



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 161/638 (25%), Positives = 240/638 (37%), Gaps = 85/638 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V+ PE +  
Sbjct: 178 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPT 237

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   +GKPI++     RR      + I N ++ D G Y 
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIAR---KARRHKSNGILEIPNFQQEDAGLYE 294

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P   +   D +    + V   C+  G PKP   W+ N 
Sbjct: 295 CVAENSRGKNVARGQLTFYAQ-PNWIQKINDIHVAMEENVFWECKANGRPKPTYRWLKNG 353

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           + L       +E G L IT V  +D+G Y C A NK G    +  L+V     I   P+ 
Sbjct: 354 EPLLTRDRIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSV-----IAVGPDF 408

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  K    W +G + I  E+E R   S D +L +
Sbjct: 409 SRTLLKRITLVKVGGEVVIECKPKASP--KPVYTWKKGRD-ILKENE-RITISEDGNLRI 464

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
              ++ D+G YTC A        +   L V+ P       + + V   +  V+       
Sbjct: 465 INVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHD 524

Query: 429 QSL----RGHFRGYKVQTWTEKD------GEGSIRELIVNKGE---------STTTEVDK 469
            SL       F G+ +    + D      G+ S  +L++   +            T VD+
Sbjct: 525 HSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDR 584

Query: 470 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPE 528
              A+    R         GPP    +    E    T Q S    P   S   +  ++  
Sbjct: 585 LSAAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQAR 635

Query: 529 QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
            P      + + +Q+V           +P + D  T +A + GL P  +Y          
Sbjct: 636 TP------FSVGWQAVN---------TVPELIDGKTFTATVVGLNPWVEYEFRTVAANVI 680

Query: 589 GDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F Y + +R
Sbjct: 681 GIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFR 740

Query: 643 RHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
            +     W    +     S  V  N+    F P+E+KV
Sbjct: 741 PYGK-MIWMLTVLASADASRYVFRNESVRPFSPFEVKV 777



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 143/369 (38%), Gaps = 30/369 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  ++            SL+I +  +  D G+Y C  +
Sbjct: 44  KKVKLNCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDAGTYQCTAT 103

Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVHN 162
           N  G   S    L       F T     ++    + +   C   G P    E    W+ N
Sbjct: 104 NSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMVLLC---GPPPHSGELSYAWIFN 160

Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN- 213
             P  Q   + RR V      + I  + KSD GNY C  TN+      LG     +  N 
Sbjct: 161 EYPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRND 217

Query: 214 --VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILET 269
             +  + P+I  + P+   T  G TV L C   G P P + W   + K +          
Sbjct: 218 GVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHKSN 277

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I +    D+G Y C A N  G     G LT     +   +  D  V   ++  + C
Sbjct: 278 GILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAMEENVFWEC 337

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   P  K +  WL+  EP+        +Q    +L +T  +  D+G Y C A+ +   
Sbjct: 338 KANGRP--KPTYRWLKNGEPLLTRDR---IQIEQGTLNITIVNLSDAGMYQCLAENKHGV 392

Query: 390 IEAQATLTV 398
           I + A L+V
Sbjct: 393 IFSNAELSV 401



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 117/303 (38%), Gaps = 34/303 (11%)

Query: 119 DLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D S L  P F  EP    F   +EE+ V   C+  G P+P I W  NG  +     + R 
Sbjct: 19  DDSTLHGPIFIQEPSPVMFPLDSEEKKVKLNCEVKGNPKPHIRWKLNGTDVDIG-MDFRY 77

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            V    + I N  K+ D G Y C ATNS G +         A+        +   +V  G
Sbjct: 78  SVVEGSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRG 137

Query: 234 KTVVLTCRVFGAPKPEVN-----WIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYT 286
           + +VL C     P P        WI N+        R+   ETG+L I  V  +D G YT
Sbjct: 138 QGMVLLC----GPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYT 193

Query: 287 CFARNK------LG-----TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           C   N       LG       +  G +   E       PE      G +    C A+ +P
Sbjct: 194 CVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNP 253

Query: 336 SLKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
               +I+W R   +PI    + R  +SN   L +    + D+G Y C A+       A+ 
Sbjct: 254 V--PTIIWRRADGKPI--ARKARRHKSNGI-LEIPNFQQEDAGLYECVAENSRGKNVARG 308

Query: 395 TLT 397
            LT
Sbjct: 309 QLT 311



 Score = 42.7 bits (99), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 21/192 (10%)

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            RG  +GY+V+ W  +D E + R+ I   G  T+T++     ++     V A+N A  GP 
Sbjct: 830  RGRIQGYEVKYWRHEDKEENARK-IRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPS 888

Query: 492  SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
            S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 889  SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNR 944

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
             +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P  + 
Sbjct: 945  QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIPKISN 994

Query: 606  DNVEGRGSTPNN 617
                G G++ +N
Sbjct: 995  AYARGSGASTSN 1006


>gi|297285374|ref|XP_001101217.2| PREDICTED: contactin-4-like isoform 2 [Macaca mulatta]
          Length = 807

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 191/727 (26%), Positives = 296/727 (40%), Gaps = 112/727 (15%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P  IW + DG PI    R  + N    L I + +  D G Y C   N 
Sbjct: 24  VKLECFALGNPVPTIIWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGLYECVAENS 81

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P +  +   I+ A EE V +ECKA+G P+P   W+ NG+P+   
Sbjct: 82  RGKNVARG-QLTFYAQPNWIQKINDIHVAMEENVFWECKANGRPKPTYRWLKNGEPLLT- 139

Query: 170 PPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
               R ++    G   ITI NL  SD G Y C A N  G ++ +  ++V+A  P+ +   
Sbjct: 140 ----RDRIQIEQGTLNITIVNL--SDAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTL 193

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADS 282
               T+   G  VV+ C+   +PKP   W   +  L    R TI E G+L+I +V  +D+
Sbjct: 194 LKRITLVKVGGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDA 253

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   
Sbjct: 254 GSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFT 313

Query: 343 WLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           W      IDF+ +         Q +   L +       +G+Y C  QT +D + A A L 
Sbjct: 314 WSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLI 373

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGE 449
           V+ P   P   T+ ++ D   A +SW P     SP ++      Y +Q  T         
Sbjct: 374 VRGPPGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFSVGWQAV 426

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTP 500
            ++ ELI   G++ T  V    P  +   R +A N    G PS         E +  VTP
Sbjct: 427 NTVPELI--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTP 484

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
             V G   S        S   + W  V  E  NG   GY + ++       G ++  L  
Sbjct: 485 ANVSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFRP-----YGKMIWMLTV 532

Query: 559 I--SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGR 611
           +  +D +    +   + P + + + +  +   G+G  S           P K P ++  R
Sbjct: 533 LASADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFAR 592

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
             +  ++ + W +  E                                       N+   
Sbjct: 593 SLSATDIEVFWASPLE--------------------------------------KNRGRI 614

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
           Q YE+K    W  +D E + R+ I   G  T+T++     ++     V A+N A  GP S
Sbjct: 615 QGYEVKY---WRHEDKEENARK-IRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPSS 670

Query: 732 EIISFVT 738
             ++  T
Sbjct: 671 ATVNVTT 677



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 145/584 (24%), Positives = 218/584 (37%), Gaps = 75/584 (12%)

Query: 132 PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKS 190
           PE +  A+  TV  EC A G P P I W   +GKPI++     RR      + I N ++ 
Sbjct: 13  PETVPTAKGATVKLECFALGNPVPTIIWRRADGKPIAR---KARRHKSNGILEIPNFQQE 69

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A NS G       +   A  P   +   D +    + V   C+  G PKP  
Sbjct: 70  DAGLYECVAENSRGKNVARGQLTFYAQ-PNWIQKINDIHVAMEENVFWECKANGRPKPTY 128

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N + L       +E G L IT V  +D+G Y C A NK G    +  L+V     I
Sbjct: 129 RWLKNGEPLLTRDRIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSV-----I 183

Query: 311 TDQPEDYE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
              P+           V+ G      C   + P  K    W +G + I  E+E R   S 
Sbjct: 184 AVGPDFSRTLLKRITLVKVGGEVVIECKPKASP--KPVYTWKKGRD-ILKENE-RITISE 239

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVS 422
           D +L +   ++ D+G YTC A        +   L V+ P       + + V   +  V+ 
Sbjct: 240 DGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLP 299

Query: 423 WNPVSPQSL----RGHFRGYKVQTWTEKD------GEGSIRELIVNKGE---------ST 463
                  SL       F G+ +    + D      G+ S  +L++   +           
Sbjct: 300 CQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMV 359

Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYL 522
            T VD+   A+    R         GPP    +    E    T Q S    P   S   +
Sbjct: 360 QTSVDRLSAAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITM 410

Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
             ++   P      + + +Q+V           +P + D  T +A + GL P  +Y    
Sbjct: 411 YVIQARTP------FSVGWQAVN---------TVPELIDGKTFTATVVGLNPWVEYEFRT 455

Query: 583 AGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
                 G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F 
Sbjct: 456 VAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFG 515

Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
           Y + +R +     W    +     S  V  N+    F P+E+KV
Sbjct: 516 YVVAFRPYGK-MIWMLTVLASADASRYVFRNESVRPFSPFEVKV 558



 Score = 42.7 bits (99), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 13/188 (6%)

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
           RG  +GY+V+ W  +D E + R+ I   G  T+T++     ++     V A+N A  GP 
Sbjct: 611 RGRIQGYEVKYWRHEDKEENARK-IRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPS 669

Query: 492 SEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKV 549
           S  ++  T +                S   L W  VK       + GYK+ Y+  + +  
Sbjct: 670 SATVNVTTRKPRKNRXXXXXXXNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSST 729

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVE 609
                    + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P  +     
Sbjct: 730 S--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIPKISNAYAR 779

Query: 610 GRGSTPNN 617
           G G++ +N
Sbjct: 780 GSGASTSN 787


>gi|432865237|ref|XP_004070484.1| PREDICTED: neural cell adhesion molecule L1-like [Oryzias latipes]
          Length = 1276

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 148/520 (28%), Positives = 243/520 (46%), Gaps = 27/520 (5%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           +ALR + ++L CI  G P P+  W +    ++ S R  + ++   L   +V  SD G Y 
Sbjct: 272 LALRGQTLDLECIAQGLPTPRVTWLRKDGELSES-RTVKESFNHRLRFLNVSESDGGEYQ 330

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+AK ++  L+V AAPY+  EP     A  ETV  +C+A G P P I W  NG
Sbjct: 331 CIADNTQGKAK-HTFMLTVEAAPYWIKEPVSQLYAAGETVRLDCQADGTPSPTIRWTVNG 389

Query: 164 KPISQAPPNPRR-KVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
              ++ P N +R +V    + +E++   DT  Y C A+N  G ++ + +V V+   P+I 
Sbjct: 390 ---ARLPENSKRIRVESGSLILEHVVFEDTAVYQCLASNKHGTIFTNTHVYVINLPPQIL 446

Query: 223 EAPKDEYT-VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
               + Y+ ++G+  +L C  FG+PKP+V W      L    R  +L +G L+I +V   
Sbjct: 447 TKDGEIYSHIEGQRALLQCETFGSPKPKVTWEREGSLLLAEPRVNLLTSGALEIANVTLD 506

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL- 339
           D G Y C  +N       +  L V   T I   P+D + + G SA F C A+ DP  +  
Sbjct: 507 DKGLYNCNVQN--SNLSITAELEVFNRTVILSMPQDLKAQPGTSAVFTCKALVDPHFRDP 564

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            I W + ++ +           ++  L +   +  D G YTC   T LD  +A  TLT+ 
Sbjct: 565 QIQWRKDNQKLQESISDEKYTFDESDLIIADVNADDEGVYTCEVITSLDMAKADGTLTLI 624

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQS--LRGHFRGYKVQTWTEKDGEGSIRELIV 457
              + PS   L+   D++   + W P    +  ++ +   ++ Q   E+ G   ++++  
Sbjct: 625 DRPDPPSRL-LLADPDSRVVTLRWTPGDDHNSPVKDYVIEFEDQNLKER-GWQKLKKVKS 682

Query: 458 NKGESTTTEVDKFVPASKNFARVLAFNGAYN-GP--PSEI--ISFVTPEGVPGTVQSLEA 512
           NK  +    V    P      R+ A N   N GP  PS+I   S   P+  P  V+S E+
Sbjct: 683 NKDHA----VLSLRPYMSYKFRISAINEVGNSGPSQPSDIYNTSAEAPDKNPENVRS-ES 737

Query: 513 IPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPL 552
           +   +     K ++  + NG    YK+ ++   G+  GP+
Sbjct: 738 VHPNTLVIAWKEMEKHEFNGPDFHYKVMWRRAVGS--GPI 775



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 149/598 (24%), Positives = 239/598 (39%), Gaps = 72/598 (12%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   +T+  EC A GLP P + W+     +S++     ++   +R+   N+ +SD G Y 
Sbjct: 273 ALRGQTLDLECIAQGLPTPRVTWLRKDGELSES--RTVKESFNHRLRFLNVSESDGGEYQ 330

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A N+ G   K  ++  +  AP   + P  +    G+TV L C+  G P P + W  N 
Sbjct: 331 CIADNTQGKA-KHTFMLTVEAAPYWIKEPVSQLYAAGETVRLDCQADGTPSPTIRWTVNG 389

Query: 257 KELTGGRYTI-LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP- 314
             L      I +E+G L +  V F D+  Y C A NK GT      +    H ++ + P 
Sbjct: 390 ARLPENSKRIRVESGSLILEHVVFEDTAVYQCLASNKHGT------IFTNTHVYVINLPP 443

Query: 315 -------EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
                  E Y    GQ A  +C     P  K  + W R  E     +EPR       +L 
Sbjct: 444 QILTKDGEIYSHIEGQRALLQCETFGSPKPK--VTWER--EGSLLLAEPRVNLLTSGALE 499

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPV- 426
           +   +  D G Y C  Q         + L++   LE  +   ++ +    KA    + V 
Sbjct: 500 IANVTLDDKGLYNCNVQ--------NSNLSITAELEVFNRTVILSMPQDLKAQPGTSAVF 551

Query: 427 -SPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN- 484
                +  HFR  ++Q W  KD +           ES + E   F  +    A V A + 
Sbjct: 552 TCKALVDPHFRDPQIQ-W-RKDNQ--------KLQESISDEKYTFDESDLIIADVNADDE 601

Query: 485 GAYNGPPSEIISFVTPEGVPGTV----------QSLEAIPLGSSAFYLKWVKPEQPNGVL 534
           G Y     E+I+ +      GT+          + L A P  S    L+W   +  N  +
Sbjct: 602 GVYT---CEVITSLDMAKADGTLTLIDRPDPPSRLLLADP-DSRVVTLRWTPGDDHNSPV 657

Query: 535 MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
             Y I+++     + G   ++L  +   +     +  L P   Y+  ++   + G+   S
Sbjct: 658 KDYVIEFEDQNLKERG--WQKLKKVK--SNKDHAVLSLRPYMSYKFRISAINEVGNSGPS 713

Query: 595 K------YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH-NTG 647
           +           P KNP+NV      PN LVI+W  M + E N P F Y++ WRR   +G
Sbjct: 714 QPSDIYNTSAEAPDKNPENVRSESVHPNTLVIAWKEMEKHEFNGPDFHYKVMWRRAVGSG 773

Query: 648 EAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTE 705
             W+++     +   +   +  +F  +E+K VQ   EK        +IV  GE    E
Sbjct: 774 PIWHENIT---KVPLVDFGDVGSFAAFEVK-VQAANEKGDGPEPDPVIVYSGEDVPLE 827



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 124/287 (43%), Gaps = 36/287 (12%)

Query: 400  VPLEAPSNFTLIQVIDAKKAV---VSWNPVSPQSLRGHFRGYKVQ-TWTE---KDGEGSI 452
            VPLE P    L+  ID K +      W P+  + +RGH  GYK+  TW       G GS 
Sbjct: 824  VPLEGP----LVVGIDLKNSTTVEARWAPIDKEKVRGHLLGYKIHLTWKGYRFHHGHGST 879

Query: 453  --RELIVNKGESTTTE--VDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ 508
                 IV K E       +    P SK    V  FN    GP SE + F+T EGVPG   
Sbjct: 880  DSENTIVEKTEPNEERKVISNLRPFSKYDLAVTVFNNKGEGPYSETVPFMTEEGVPGPPA 939

Query: 509  SLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
             L       +   ++W  P  PNG L GY ++YQ +       + E+   I +P  T   
Sbjct: 940  FLSLRSPSETEMTMEWKPPVHPNGNLTGYVLQYQQITENDDSLIKEKT--IDNPKITHHT 997

Query: 569  LAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGR--GSTPNNLV-ISWTAM 625
            L GL+P + YR +L+G T  G+G   K +        D +      S   NLV ISW   
Sbjct: 998  LKGLDPHSSYRFYLSGRTAVGNG---KPIMKTGATKSDALPMNITLSVGENLVNISWA-- 1052

Query: 626  PEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
              ++    H  ++I +R  N  E         WR++E + ++Q  +Q
Sbjct: 1053 --VKRKHRHTDFQIHYRDDNESE---------WRKTEKLNSSQFFYQ 1088



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 134/314 (42%), Gaps = 35/314 (11%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSD--RISQGNYGKSLIIKHVEFSD-------QGSYT 103
           + C   G P P   W+KDG   +P     +    +  S   K    S+       QG Y 
Sbjct: 72  MSCEASGNPQPSFTWTKDGHKFDPRSEPHLKVSEHPGSFEFKASNGSNMVNLKSYQGKYV 131

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFI-NAAEEETVTFEC---KASGLPEPEIHW 159
           C  +N +G A S    LS+   P    E + I  A E   +T +C   K+S +  P IHW
Sbjct: 132 CYATNNLGTAMSKEATLSIDGLPSLQKEKDSIFRATEGSNMTLKCNPPKSSMV--PVIHW 189

Query: 160 VHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNA--TNSLGYVYKDVYV--- 212
           +     +     + R  VG +  +   NL+ +D+  +Y CN     +   + KD +    
Sbjct: 190 M--DWKLRHIELSDRVMVGKDGNLYFANLKTTDSRDDYICNLQYMETRTILTKDPFTLEV 247

Query: 213 ---NVLAH--APEI---TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRY 264
              N + H   P++   T +      + G+T+ L C   G P P V W+    EL+  R 
Sbjct: 248 KPSNSIVHNRRPQMVTPTGSSSTYLALRGQTLDLECIAQGLPTPRVTWLRKDGELSESR- 306

Query: 265 TILETGD--LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAG 322
           T+ E+ +  L+  +V+ +D GEY C A N  G A+ +  LTV+   +   +P      AG
Sbjct: 307 TVKESFNHRLRFLNVSESDGGEYQCIADNTQGKAKHTFMLTVEAAPYWIKEPVSQLYAAG 366

Query: 323 QSATFRCNAVSDPS 336
           ++    C A   PS
Sbjct: 367 ETVRLDCQADGTPS 380



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 76/317 (23%), Positives = 121/317 (38%), Gaps = 53/317 (16%)

Query: 124 AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK----------PISQAPPNP 173
           ++P     P+ I     E     C+ASG P+P   W  +G            +S+ P + 
Sbjct: 51  SSPVIINPPKTIIVVGVEEFIMSCEASGNPQPSFTWTKDGHKFDPRSEPHLKVSEHPGSF 110

Query: 174 RRKV--GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-T 230
             K   G N + +    KS  G Y C ATN+LG          +   P + +     +  
Sbjct: 111 EFKASNGSNMVNL----KSYQGKYVCYATNNLGTAMSKEATLSIDGLPSLQKEKDSIFRA 166

Query: 231 VDGKTVVLTCRVFGAPK----PEVNWIH---NQKELTGGRYTILETGDLKITDVAFADS- 282
            +G  + L C     PK    P ++W+       EL+  R  + + G+L   ++   DS 
Sbjct: 167 TEGSNMTLKC---NPPKSSMVPVIHWMDWKLRHIELS-DRVMVGKDGNLYFANLKTTDSR 222

Query: 283 GEYTC---FARNKLGTAQGSGSLTVKEHTHI-----------TDQPEDYEVEAGQSATFR 328
            +Y C   +   +    +   +L VK    I           T     Y    GQ+    
Sbjct: 223 DDYICNLQYMETRTILTKDPFTLEVKPSNSIVHNRRPQMVTPTGSSSTYLALRGQTLDLE 282

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFV-QSNDYSLTVTKSSELDSGQYTCRAQTEL 387
           C A   P+ +  + WLR    +   SE R V +S ++ L     SE D G+Y C A    
Sbjct: 283 CIAQGLPTPR--VTWLRKDGEL---SESRTVKESFNHRLRFLNVSESDGGEYQCIA---- 333

Query: 388 DFIEAQATLTVQVPLEA 404
           D  + +A  T  + +EA
Sbjct: 334 DNTQGKAKHTFMLTVEA 350


>gi|348573577|ref|XP_003472567.1| PREDICTED: contactin-5-like [Cavia porcellus]
          Length = 1133

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 156/609 (25%), Positives = 258/609 (42%), Gaps = 45/609 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           A +   V++ C   G P+P   W K    I    R+ +      L I +V+  D G Y C
Sbjct: 346 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRKSQ--AVLEIPNVQLEDAGIYEC 403

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N  G+  S+   L +   P++  +           + +ECKA+G P P   W+ NG 
Sbjct: 404 RAENSRGK-NSFRGQLQIYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNGV 462

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT-- 222
           P+    P  R       + I ++ +SD+G Y C A N  G +Y    + +LA AP     
Sbjct: 463 PLL---PQTRIHTVNGVLMIHSVNQSDSGMYQCLAENKYGAIYASAELKILASAPTFAPN 519

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           +  K       + V++ C+  G+PKP ++W    K +    +  IL  G L+I + + +D
Sbjct: 520 QLKKTVIVTKDQEVIIECKPQGSPKPNISWKKGDKAVRESKKIAILPDGSLRILNASKSD 579

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+Y C   N  G+A+   S++VKE T I   P+  E+  G+S    C A+ D +L ++ 
Sbjct: 580 EGKYVCRGENIFGSAEIVASVSVKEPTKIELTPKRTELTVGESIVLNCKAIHDATLDVNF 639

Query: 342 VWLRGSEPIDFES-----EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W    +PIDFE      E    Q++   L +     + +G+Y CR QT  D +  +A L
Sbjct: 640 YWTLKGQPIDFEKDGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAEL 699

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKDGE 449
            V+ P   P    +++ I    A +SW+P +          Y +Q        W      
Sbjct: 700 LVRGP-PGPPGIVIVEEITESTATLSWSPAADN--HSPISSYNLQARSPFSLGWQTVK-- 754

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQ 508
            ++ E I    ES    VD   P  +   RV+A N    G PS     + T E VP T  
Sbjct: 755 -TVPETITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAP 811

Query: 509 SLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISDPT 563
           +  +   G      + W  V  E  NG   GY + ++    +G K     E++   S+ +
Sbjct: 812 TNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSEAS 866

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNL 618
               +   + P T + + +  Y   GDG  S+ +        P   P +V+    + + +
Sbjct: 867 KFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSTAPTDVKATSMSVSEI 926

Query: 619 VISWTAMPE 627
           +++W  + E
Sbjct: 927 LVAWKHIKE 935



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 162/665 (24%), Positives = 247/665 (37%), Gaps = 81/665 (12%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
           +L I  V+ SD GSY C V N V  A+  S        +  V+      +E  F   + A
Sbjct: 287 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 346

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W+  NG      P   R +     + I N++  D G Y 
Sbjct: 347 AKGTTVKMECFALGNPVPTITWMKVNG----YIPSKSRLRKSQAVLEIPNVQLEDAGIYE 402

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + +  + P   E   D     G  +   C+  G P+P   W+ N 
Sbjct: 403 CRAENSRGKNSFRGQLQIYTY-PHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG 461

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
             L          G L I  V  +DSG Y C A NK G    S  L +      T  P  
Sbjct: 462 VPLLPQTRIHTVNGVLMIHSVNQSDSGMYQCLAENKYGAIYASAELKILASAP-TFAPNQ 520

Query: 317 YE----VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
            +    V   Q     C     P  K +I W +G + +      +     D SL +  +S
Sbjct: 521 LKKTVIVTKDQEVIIECKPQGSP--KPNISWKKGDKAV--RESKKIAILPDGSLRILNAS 576

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI---QVIDAKKAV------ 420
           + D G+Y CR +      E  A+++V+ P +    P    L     ++   KA+      
Sbjct: 577 KSDEGKYVCRGENIFGSAEIVASVSVKEPTKIELTPKRTELTVGESIVLNCKAIHDATLD 636

Query: 421 ------VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
                 +   P+  +   GHF   + Q       +  IR +++         V     + 
Sbjct: 637 VNFYWTLKGQPIDFEKDGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQTTADSV 693

Query: 475 KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
            + A +L       GPP          G PG V   E   +  S   L W      +  +
Sbjct: 694 SDEAELLV-----RGPP----------GPPGIVIVEE---ITESTATLSWSPAADNHSPI 735

Query: 535 MGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
             Y ++ +S     +G   ++ +P        SA    L P  +Y   +      G G  
Sbjct: 736 SSYNLQARS--PFSLGWQTVKTVPETITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDP 793

Query: 594 S------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTG 647
           S      +    VP   P NV GR    + LVI+W  + E   N   F Y + +R + T 
Sbjct: 794 STPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT- 852

Query: 648 EAWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV---NKGEST 702
             W +  V     S+ +  ++  P   P+E+K V  +  K G+G   +++V    +GE +
Sbjct: 853 RGWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVVICSAEGEPS 910

Query: 703 TTEVD 707
           T   D
Sbjct: 911 TAPTD 915



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 89/395 (22%), Positives = 146/395 (36%), Gaps = 35/395 (8%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH-VEFSDQGSYTCEVSN 108
           KV L C     P+P   W ++G  I+            + II +  E  D G Y C  +N
Sbjct: 152 KVALNCEVRANPVPSYRWLRNGTQIDLESDYRYSLIDGTFIINNPSEAKDSGQYQCLATN 211

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKPI 166
             G   S    L       F+      ++  E + V   C      PE    WV N  P 
Sbjct: 212 SFGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP- 270

Query: 167 SQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VYK 208
           S    + RR +      + I  ++ SD G+Y C   N++                  V  
Sbjct: 271 SFVVEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMG 330

Query: 209 DVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE 268
           +    +  H P    A K      G TV + C   G P P + W+     +         
Sbjct: 331 EYEPKIEVHFPFTVTAAK------GTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRKS 384

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
              L+I +V   D+G Y C A N  G     G L +  + H  ++  D ++++G    + 
Sbjct: 385 QAVLEIPNVQLEDAGIYECRAENSRGKNSFRGQLQIYTYPHWVEKLNDTQLDSGSPLRWE 444

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A   P  + +  WL+   P+  ++    + + +  L +   ++ DSG Y C A+ +  
Sbjct: 445 CKATGKP--RPTYRWLKNGVPLLPQTR---IHTVNGVLMIHSVNQSDSGMYQCLAENKYG 499

Query: 389 FIEAQATLTV--QVPLEAPSNFTLIQVIDAKKAVV 421
            I A A L +    P  AP+      ++   + V+
Sbjct: 500 AIYASAELKILASAPTFAPNQLKKTVIVTKDQEVI 534



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 121/297 (40%), Gaps = 35/297 (11%)

Query: 113 AKSYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
           + ++  D SV   P F  EP+   F   ++E  V   C+    P P   W+ NG  I   
Sbjct: 120 SDAFKQDESVDYGPVFVQEPDGIIFPTDSDENKVALNCEVRANPVPSYRWLRNGTQIDLE 179

Query: 170 PPNPRRKVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
             + R  +      I N  ++ D+G Y C ATNS G +         A+    +   +  
Sbjct: 180 S-DYRYSLIDGTFIINNPSEAKDSGQYQCLATNSFGSILSREATLQFAYLGNFSGRTRSA 238

Query: 229 YTV-DGKTVVLTCRVFGAPKPE-----VNWIHNQKEL----TGGRYTILETGDLKITDVA 278
            +V +G+ VVL C    +P P       +W+ N+          R+   ETG+L I+ V 
Sbjct: 239 VSVREGQGVVLMC----SPPPHSPEIIYSWVFNEFPSFVVEDSRRFISQETGNLYISKVQ 294

Query: 279 FADSGEYTCFARNKLGTAQ---GSGSLTVKEHTHITDQPEDYEVE--------AGQSATF 327
            +D G Y C  +N +  A+       LT++    + +     EV          G +   
Sbjct: 295 TSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKM 354

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
            C A+ +P    +I W++ +  I  +S  R  Q+    L +      D+G Y CRA+
Sbjct: 355 ECFALGNPV--PTITWMKVNGYIPSKSRLRKSQA---VLEIPNVQLEDAGIYECRAE 406



 Score = 47.4 bits (111), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 73/181 (40%), Gaps = 12/181 (6%)

Query: 24  ISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQG 83
           I AS    AP Q    +K  +  ++++V + C   G+P P   W K    +  S +I+  
Sbjct: 509 ILASAPTFAPNQ---LKKTVIVTKDQEVIIECKPQGSPKPNISWKKGDKAVRESKKIAIL 565

Query: 84  NYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETV 143
             G SL I +   SD+G Y C   N  G A+  +  +SV       + P+       E++
Sbjct: 566 PDG-SLRILNASKSDEGKYVCRGENIFGSAEIVA-SVSVKEPTKIELTPKRTELTVGESI 623

Query: 144 TFECKA--SGLPEPEIHWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYG 196
              CKA      +   +W   G+PI          + R +     + I N+     G YG
Sbjct: 624 VLNCKAIHDATLDVNFYWTLKGQPIDFEKDGGHFESIRAQASSADLMIRNILLMHAGRYG 683

Query: 197 C 197
           C
Sbjct: 684 C 684


>gi|403309233|ref|XP_003945023.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1209

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 179/713 (25%), Positives = 301/713 (42%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 253 LKGETLLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYGKTLKIENVSYQDKGNYRCT 311

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            +N +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG P
Sbjct: 312 ATNFLGTA-THDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 370

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEA 224
           I   P      V P  I+  NL+ + TG Y C A+N  G +  +  +N++   P I TE 
Sbjct: 371 IDNHP-FAGDVVFPREISFTNLQPNHTGVYQCEASNVHGTILANANINIVDVRPLIQTED 429

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            ++  TV G +  L C+ F +P+  V+W  +   K L G RY I E G L+I      D+
Sbjct: 430 EENYATVVGYSAFLHCKFFASPEAIVSWQKVEEAKPLEGRRYHIYENGTLQINRTTEEDA 489

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L 
Sbjct: 490 GSYSCWVENSIGKTAVTANLDIRNATKLRVSPKNPRIPKLHMLELHCESKCDAHLKHSLK 549

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y C A T+LD       +TV 
Sbjct: 550 LSWSKDGEAFEINGTEDGRIIIDGANLTISNITLEDQGIYCCSAHTDLDSAADITQVTVL 609

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +      +   Y V+    K+  G   EL   +
Sbjct: 610 DVPDPPENLHLSERQN-RSVRLTWE--AGDDHNSNISEYIVEFEGNKEELGRWEELTRVQ 666

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 667 GKKTTV-ILPLAPFVRYQFRVIAMNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 725

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 726 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 776

Query: 576 T--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G + + +  Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 777 VYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKD 836

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ +++        
Sbjct: 837 RVHGRLKGYQINW--------WKTKSLLDGRT-----------HPKEVNILKF------- 870

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 871 ---------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYVFQTPEG 914



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 127/569 (22%), Positives = 229/569 (40%), Gaps = 58/569 (10%)

Query: 135 INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSD 191
           I   + ET+  EC A GLP P++ W   G  + +      R+   N    + IEN+   D
Sbjct: 250 ITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKG-----RETKENYGKTLKIENVSYQD 304

Query: 192 TGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVN 251
            GNY C ATN LG    D +V ++   P  T+ P+      G   +L C   G P+P + 
Sbjct: 305 KGNYRCTATNFLGTATHDFHV-IVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIK 363

Query: 252 WIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH 309
           W  N   +    +   ++   ++  T++    +G Y C A N  GT   + ++ + +   
Sbjct: 364 WRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTGVYQCEASNVHGTILANANINIVDVRP 423

Query: 310 I--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
           +  T+  E+Y    G SA   C   + P   +S  W +  E    E     +  N  +L 
Sbjct: 424 LIQTEDEENYATVVGYSAFLHCKFFASPEAIVS--WQKVEEAKPLEGRRYHIYENG-TLQ 480

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVS 427
           + +++E D+G Y+C  +  +      A L ++               +A K  VS  P +
Sbjct: 481 INRTTEEDAGSYSCWVENSIGKTAVTANLDIR---------------NATKLRVS--PKN 523

Query: 428 PQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGES---TTTEVDKFVPASKNFA---RVL 481
           P+  + H      ++  +   + S++      GE+     TE  + +    N       L
Sbjct: 524 PRIPKLHMLELHCESKCDAHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANLTISNITL 583

Query: 482 AFNGAY------NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
              G Y      +   +  I+ VT   VP   ++L      + +  L W   +  N  + 
Sbjct: 584 EDQGIYCCSAHTDLDSAADITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGDDHNSNIS 643

Query: 536 GYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK 595
            Y ++++  K  ++G   E L  +    TT   +  L P  +Y+  +    + G    S+
Sbjct: 644 EYIVEFEGNK-EELG-RWEELTRVQGKKTTV--ILPLAPFVRYQFRVIAMNEVGRSQPSQ 699

Query: 596 YLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEA 649
              +       P +NP N+  + S P  ++I W  +  +E N P  +YR+ W+       
Sbjct: 700 PSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVE 759

Query: 650 WNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           W ++ V +     L +     + PY++KV
Sbjct: 760 WEEETVTN---HTLRVMTPAVYAPYDVKV 785



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 133/575 (23%), Positives = 230/575 (40%), Gaps = 51/575 (8%)

Query: 53   LFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L C F  +P     W K  +  P+    R        +L I      D GSY+C V N +
Sbjct: 443  LHCKFFASPEAIVSWQKVEEAKPL--EGRRYHIYENGTLQINRTTEEDAGSYSCWVENSI 500

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECK----ASGLPEPEIHWVHNGKPI 166
            G+  + + +L +  A    V P+     +   +   C+    A      ++ W  +G+  
Sbjct: 501  GKT-AVTANLDIRNATKLRVSPKNPRIPKLHMLELHCESKCDAHLKHSLKLSWSKDGEAF 559

Query: 167  S-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
                  + R  +    +TI N+   D G Y C+A   L        V VL    ++ + P
Sbjct: 560  EINGTEDGRIIIDGANLTISNITLEDQGIYCCSAHTDLDSAADITQVTVL----DVPDPP 615

Query: 226  KDEYTVD--GKTVVLTCRVFGAPKPE-----VNWIHNQKELTGGRYTILETGDLKITDVA 278
            ++ +  +   ++V LT               V +  N++EL  GR+  L     K T V 
Sbjct: 616  ENLHLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEEL--GRWEELTRVQGKKTTVI 673

Query: 279  FADSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSAT------ 326
               +     ++   A N++G +Q S      E         P++  V+A Q         
Sbjct: 674  LPLAPFVRYQFRVIAMNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWE 733

Query: 327  -FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
              +    + P L+  + W     P+++E E       +++L V   +         +A  
Sbjct: 734  PLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TVTNHTLRVMTPAVYAPYDVKVQAIN 789

Query: 386  ELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKAVVSWNPVSPQSLRGHFRGYKVQT 442
            +L       ++T+    + P    +I    VI++    V+W+ +    + G  +GY++  
Sbjct: 790  QLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQINW 849

Query: 443  WTEK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
            W  K   DG    +E+ + K  G+  +  V      S+    VLA+N    GP SE   F
Sbjct: 850  WKTKSLLDGRTHPKEVNILKFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYVF 909

Query: 498  VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERL 556
             TPEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T ++G L +  
Sbjct: 910  QTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGNLTGYLLQYQIINDTYEIGELNDI- 968

Query: 557  PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
              I+ P+  S  L+ L  +T+Y+ +L   T  G G
Sbjct: 969  -NITTPSKPSWHLSNLNATTRYKFYLRACTSKGCG 1002



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 170/418 (40%), Gaps = 54/418 (12%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSD-RISQGNYGKSLIIK---HVEFSDQGSYTCEVS 107
           ++ C   G P P   W+KD  P   +D RI   N   +  I    H+    QG Y C  S
Sbjct: 54  QIECEAKGNPEPTFTWTKDDNPFYFTDPRIITSNSSGTFRIPNEGHISHF-QGKYRCFAS 112

Query: 108 NGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECK-ASGLPEPEIHWVH-N 162
           N +G A S  I+  V + P F    ++P  +   E + +   C    GLP   I+W++  
Sbjct: 113 NKLGIAMSEEIEFIVPSVPKFPKENIDP--LEVEEGDPIVLPCNPPKGLPPLHIYWMNIE 170

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-NSLGYVYKDVYVNVLAHA-- 218
            + I Q       + G   +   N+ + D+ N Y C A    L  + + + + +  ++  
Sbjct: 171 LEHIEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSN 228

Query: 219 ------PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
                 P +   P +  +      + G+T++L C   G P P+V+W     +L  GR T 
Sbjct: 229 SIKQRKPRLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETK 288

Query: 267 LETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
              G  LKI +V++ D G Y C A N LGTA     + V+E    T +P+      G + 
Sbjct: 289 ENYGKTLKIENVSYQDKGNYRCTATNFLGTATHDFHVIVEEPPRWTKKPQSAVYSTGSNG 348

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCR 382
              C A  +P  + +I W     PID   F  +  F +     ++ T      +G Y C 
Sbjct: 349 ILLCEAEGEP--QPTIKWRVNGSPIDNHPFAGDVVFPR----EISFTNLQPNHTGVYQCE 402

Query: 383 AQTELDFIEAQATLTV-----QVPLEAPSNFTLI---------QVIDAKKAVVSWNPV 426
           A      I A A + +      +  E   N+  +         +   + +A+VSW  V
Sbjct: 403 ASNVHGTILANANINIVDVRPLIQTEDEENYATVVGYSAFLHCKFFASPEAIVSWQKV 460



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 110/293 (37%), Gaps = 31/293 (10%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPN--PRRKVGPNRITIENLRKSDTGNYGC 197
           +E    EC+A G PEP   W  +  P     P        G  RI  E       G Y C
Sbjct: 50  DEYFQIECEAKGNPEPTFTWTKDDNPFYFTDPRIITSNSSGTFRIPNEGHISHFQGKYRC 109

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN 255
            A+N LG    +    ++   P+  +   D   V +G  +VL C    G P   + W++ 
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKENIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNI 169

Query: 256 QKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTH 309
           + E      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV     
Sbjct: 170 ELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNS 229

Query: 310 ITDQ-------PEDYEVEA------GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           I  +       P +   E+      G++    C A   P+ ++    + G  P   E++ 
Sbjct: 230 IKQRKPRLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKE 289

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFT 409
            + +    +L +   S  D G Y C A   L      AT    V +E P  +T
Sbjct: 290 NYGK----TLKIENVSYQDKGNYRCTATNFL----GTATHDFHVIVEEPPRWT 334


>gi|403309237|ref|XP_003945025.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 1171

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 181/713 (25%), Positives = 305/713 (42%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 269 LKGETLLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYGKTLKIENVSYQDKGNYRCT 327

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            +N +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG P
Sbjct: 328 ATNFLGTA-THDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 386

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEA 224
           I   P      V P  I+  NL+ + TG Y C A+N  G +  +  +N++   P I TE 
Sbjct: 387 IDNHP-FAGDVVFPREISFTNLQPNHTGVYQCEASNVHGTILANANINIVDVRPLIQTED 445

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            ++  TV G +  L C+ F +P+  V+W  +   K L G RY I E G L+I      D+
Sbjct: 446 EENYATVVGYSAFLHCKFFASPEAIVSWQKVEEAKPLEGRRYHIYENGTLQINRTTEEDA 505

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L 
Sbjct: 506 GSYSCWVENSIGKTAVTANLDIRNATKLRVSPKNPRIPKLHMLELHCESKCDAHLKHSLK 565

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y C A T+LD       +TV 
Sbjct: 566 LSWSKDGEAFEINGTEDGRIIIDGANLTISNITLEDQGIYCCSAHTDLDSAADITQVTVL 625

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +      +   Y V+    K+  G   EL   +
Sbjct: 626 DVPDPPENLHLSERQN-RSVRLTWE--AGDDHNSNISEYIVEFEGNKEELGRWEELTRVQ 682

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 683 GKKTTV-ILPLAPFVRYQFRVIAMNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 741

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 742 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 792

Query: 576 T--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G + + +  Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 793 VYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKD 852

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ +++ ++ +   
Sbjct: 853 RVHGRLKGYQINW--------WKTKSLLDGRT-----------HPKEVNILK-FSGQRNS 892

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
           G +  L            D F   S+    VLA+N    GP SE   F TPEG
Sbjct: 893 GMVPSL------------DAF---SEFHLTVLAYNSKGAGPESEPYVFQTPEG 930



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 141/650 (21%), Positives = 256/650 (39%), Gaps = 75/650 (11%)

Query: 54  FCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113
           +C F   P  +TI  K  +P+              L +  ++ ++  S + E+ +     
Sbjct: 202 YCCFAAFPRLRTIVQK--MPM-------------KLTVNSLKHANDSSSSTEIGSKANSI 246

Query: 114 KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           K     L  L  P  +     I   + ET+  EC A GLP P++ W   G  + +     
Sbjct: 247 KQRKPRL--LLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKG---- 300

Query: 174 RRKVGPN---RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
            R+   N    + IEN+   D GNY C ATN LG    D +V ++   P  T+ P+    
Sbjct: 301 -RETKENYGKTLKIENVSYQDKGNYRCTATNFLGTATHDFHV-IVEEPPRWTKKPQSAVY 358

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCF 288
             G   +L C   G P+P + W  N   +    +   ++   ++  T++    +G Y C 
Sbjct: 359 STGSNGILLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTGVYQCE 418

Query: 289 ARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           A N  GT   + ++ + +   +  T+  E+Y    G SA   C   + P   +S  W + 
Sbjct: 419 ASNVHGTILANANINIVDVRPLIQTEDEENYATVVGYSAFLHCKFFASPEAIVS--WQKV 476

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPS 406
            E    E     +  N  +L + +++E D+G Y+C  +  +      A L ++       
Sbjct: 477 EEAKPLEGRRYHIYENG-TLQINRTTEEDAGSYSCWVENSIGKTAVTANLDIR------- 528

Query: 407 NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGES---T 463
                   +A K  VS  P +P+  + H      ++  +   + S++      GE+    
Sbjct: 529 --------NATKLRVS--PKNPRIPKLHMLELHCESKCDAHLKHSLKLSWSKDGEAFEIN 578

Query: 464 TTEVDKFVPASKNFA---RVLAFNGAY------NGPPSEIISFVTPEGVPGTVQSLEAIP 514
            TE  + +    N       L   G Y      +   +  I+ VT   VP   ++L    
Sbjct: 579 GTEDGRIIIDGANLTISNITLEDQGIYCCSAHTDLDSAADITQVTVLDVPDPPENLHLSE 638

Query: 515 LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
             + +  L W   +  N  +  Y ++++  K  ++G   E L  +    TT   +  L P
Sbjct: 639 RQNRSVRLTWEAGDDHNSNISEYIVEFEGNK-EELG-RWEELTRVQGKKTTV--ILPLAP 694

Query: 575 STKYRIHLAGYTKAGDGAESKYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPEI 628
             +Y+  +    + G    S+   +       P +NP N+  + S P  ++I W  +  +
Sbjct: 695 FVRYQFRVIAMNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSM 754

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           E N P  +YR+ W+       W ++ V +     L +     + PY++KV
Sbjct: 755 EQNGPGLEYRVTWKPQGAPVEWEEETVTN---HTLRVMTPAVYAPYDVKV 801



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 133/575 (23%), Positives = 230/575 (40%), Gaps = 51/575 (8%)

Query: 53   LFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L C F  +P     W K  +  P+    R        +L I      D GSY+C V N +
Sbjct: 459  LHCKFFASPEAIVSWQKVEEAKPL--EGRRYHIYENGTLQINRTTEEDAGSYSCWVENSI 516

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECK----ASGLPEPEIHWVHNGKPI 166
            G+  + + +L +  A    V P+     +   +   C+    A      ++ W  +G+  
Sbjct: 517  GKT-AVTANLDIRNATKLRVSPKNPRIPKLHMLELHCESKCDAHLKHSLKLSWSKDGEAF 575

Query: 167  S-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
                  + R  +    +TI N+   D G Y C+A   L        V VL    ++ + P
Sbjct: 576  EINGTEDGRIIIDGANLTISNITLEDQGIYCCSAHTDLDSAADITQVTVL----DVPDPP 631

Query: 226  KDEYTVD--GKTVVLTCRVFGAPKPE-----VNWIHNQKELTGGRYTILETGDLKITDVA 278
            ++ +  +   ++V LT               V +  N++EL  GR+  L     K T V 
Sbjct: 632  ENLHLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEEL--GRWEELTRVQGKKTTVI 689

Query: 279  FADSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSAT------ 326
               +     ++   A N++G +Q S      E         P++  V+A Q         
Sbjct: 690  LPLAPFVRYQFRVIAMNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWE 749

Query: 327  -FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
              +    + P L+  + W     P+++E E       +++L V   +         +A  
Sbjct: 750  PLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TVTNHTLRVMTPAVYAPYDVKVQAIN 805

Query: 386  ELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKAVVSWNPVSPQSLRGHFRGYKVQT 442
            +L       ++T+    + P    +I    VI++    V+W+ +    + G  +GY++  
Sbjct: 806  QLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQINW 865

Query: 443  WTEK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
            W  K   DG    +E+ + K  G+  +  V      S+    VLA+N    GP SE   F
Sbjct: 866  WKTKSLLDGRTHPKEVNILKFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYVF 925

Query: 498  VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERL 556
             TPEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T ++G L +  
Sbjct: 926  QTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGNLTGYLLQYQIINDTYEIGELNDI- 984

Query: 557  PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
              I+ P+  S  L+ L  +T+Y+ +L   T  G G
Sbjct: 985  -NITTPSKPSWHLSNLNATTRYKFYLRACTSKGCG 1018



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 170/434 (39%), Gaps = 70/434 (16%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSD-RISQGNYGKSLIIK---HVEFSDQGSYTCEVS 107
           ++ C   G P P   W+KD  P   +D RI   N   +  I    H+    QG Y C  S
Sbjct: 54  QIECEAKGNPEPTFTWTKDDNPFYFTDPRIITSNSSGTFRIPNEGHISHF-QGKYRCFAS 112

Query: 108 NGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECK-ASGLPEPEIHWVH-N 162
           N +G A S  I+  V + P F    ++P  +   E + +   C    GLP   I+W++  
Sbjct: 113 NKLGIAMSEEIEFIVPSVPKFPKENIDP--LEVEEGDPIVLPCNPPKGLPPLHIYWMNIE 170

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLA 216
            + I Q       + G   +   N+ + D+ N Y C A        +  +   + VN L 
Sbjct: 171 LEHIEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLK 228

Query: 217 HA--------------------PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEV 250
           HA                    P +   P +  +      + G+T++L C   G P P+V
Sbjct: 229 HANDSSSSTEIGSKANSIKQRKPRLLLPPTESGSESSITILKGETLLLECFAEGLPTPQV 288

Query: 251 NWIHNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH 309
           +W     +L  GR T    G  LKI +V++ D G Y C A N LGTA     + V+E   
Sbjct: 289 DWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTATNFLGTATHDFHVIVEEPPR 348

Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID---FESEPRFVQSNDYSL 366
            T +P+      G +    C A  +P  + +I W     PID   F  +  F +     +
Sbjct: 349 WTKKPQSAVYSTGSNGILLCEAEGEP--QPTIKWRVNGSPIDNHPFAGDVVFPR----EI 402

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTV-----QVPLEAPSNFTLI---------Q 412
           + T      +G Y C A      I A A + +      +  E   N+  +         +
Sbjct: 403 SFTNLQPNHTGVYQCEASNVHGTILANANINIVDVRPLIQTEDEENYATVVGYSAFLHCK 462

Query: 413 VIDAKKAVVSWNPV 426
              + +A+VSW  V
Sbjct: 463 FFASPEAIVSWQKV 476



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 109/309 (35%), Gaps = 47/309 (15%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPN--PRRKVGPNRITIENLRKSDTGNYGC 197
           +E    EC+A G PEP   W  +  P     P        G  RI  E       G Y C
Sbjct: 50  DEYFQIECEAKGNPEPTFTWTKDDNPFYFTDPRIITSNSSGTFRIPNEGHISHFQGKYRC 109

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN 255
            A+N LG    +    ++   P+  +   D   V +G  +VL C    G P   + W++ 
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKENIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNI 169

Query: 256 QKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTH 309
           + E      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV    H
Sbjct: 170 ELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKH 229

Query: 310 ITDQPEDYEVEA-----------------------------GQSATFRCNAVSDPSLKLS 340
             D     E+ +                             G++    C A   P+ ++ 
Sbjct: 230 ANDSSSSTEIGSKANSIKQRKPRLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVD 289

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
              + G  P   E++  + +    +L +   S  D G Y C A   L      AT    V
Sbjct: 290 WNKIGGDLPKGRETKENYGK----TLKIENVSYQDKGNYRCTATNFL----GTATHDFHV 341

Query: 401 PLEAPSNFT 409
            +E P  +T
Sbjct: 342 IVEEPPRWT 350


>gi|403309235|ref|XP_003945024.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 1225

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 179/713 (25%), Positives = 301/713 (42%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 269 LKGETLLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYGKTLKIENVSYQDKGNYRCT 327

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            +N +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG P
Sbjct: 328 ATNFLGTA-THDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 386

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEA 224
           I   P      V P  I+  NL+ + TG Y C A+N  G +  +  +N++   P I TE 
Sbjct: 387 IDNHP-FAGDVVFPREISFTNLQPNHTGVYQCEASNVHGTILANANINIVDVRPLIQTED 445

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            ++  TV G +  L C+ F +P+  V+W  +   K L G RY I E G L+I      D+
Sbjct: 446 EENYATVVGYSAFLHCKFFASPEAIVSWQKVEEAKPLEGRRYHIYENGTLQINRTTEEDA 505

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L 
Sbjct: 506 GSYSCWVENSIGKTAVTANLDIRNATKLRVSPKNPRIPKLHMLELHCESKCDAHLKHSLK 565

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y C A T+LD       +TV 
Sbjct: 566 LSWSKDGEAFEINGTEDGRIIIDGANLTISNITLEDQGIYCCSAHTDLDSAADITQVTVL 625

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +      +   Y V+    K+  G   EL   +
Sbjct: 626 DVPDPPENLHLSERQN-RSVRLTWE--AGDDHNSNISEYIVEFEGNKEELGRWEELTRVQ 682

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 683 GKKTTV-ILPLAPFVRYQFRVIAMNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 741

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 742 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 792

Query: 576 T--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G + + +  Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 793 VYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKD 852

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ +++        
Sbjct: 853 RVHGRLKGYQINW--------WKTKSLLDGRT-----------HPKEVNILKF------- 886

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 887 ---------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYVFQTPEG 930



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 141/650 (21%), Positives = 256/650 (39%), Gaps = 75/650 (11%)

Query: 54  FCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113
           +C F   P  +TI  K  +P+              L +  ++ ++  S + E+ +     
Sbjct: 202 YCCFAAFPRLRTIVQK--MPM-------------KLTVNSLKHANDSSSSTEIGSKANSI 246

Query: 114 KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           K     L  L  P  +     I   + ET+  EC A GLP P++ W   G  + +     
Sbjct: 247 KQRKPRL--LLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKG---- 300

Query: 174 RRKVGPN---RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
            R+   N    + IEN+   D GNY C ATN LG    D +V ++   P  T+ P+    
Sbjct: 301 -RETKENYGKTLKIENVSYQDKGNYRCTATNFLGTATHDFHV-IVEEPPRWTKKPQSAVY 358

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCF 288
             G   +L C   G P+P + W  N   +    +   ++   ++  T++    +G Y C 
Sbjct: 359 STGSNGILLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTGVYQCE 418

Query: 289 ARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           A N  GT   + ++ + +   +  T+  E+Y    G SA   C   + P   +S  W + 
Sbjct: 419 ASNVHGTILANANINIVDVRPLIQTEDEENYATVVGYSAFLHCKFFASPEAIVS--WQKV 476

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPS 406
            E    E     +  N  +L + +++E D+G Y+C  +  +      A L ++       
Sbjct: 477 EEAKPLEGRRYHIYENG-TLQINRTTEEDAGSYSCWVENSIGKTAVTANLDIR------- 528

Query: 407 NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGES---T 463
                   +A K  VS  P +P+  + H      ++  +   + S++      GE+    
Sbjct: 529 --------NATKLRVS--PKNPRIPKLHMLELHCESKCDAHLKHSLKLSWSKDGEAFEIN 578

Query: 464 TTEVDKFVPASKNFA---RVLAFNGAY------NGPPSEIISFVTPEGVPGTVQSLEAIP 514
            TE  + +    N       L   G Y      +   +  I+ VT   VP   ++L    
Sbjct: 579 GTEDGRIIIDGANLTISNITLEDQGIYCCSAHTDLDSAADITQVTVLDVPDPPENLHLSE 638

Query: 515 LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
             + +  L W   +  N  +  Y ++++  K  ++G   E L  +    TT   +  L P
Sbjct: 639 RQNRSVRLTWEAGDDHNSNISEYIVEFEGNK-EELG-RWEELTRVQGKKTTV--ILPLAP 694

Query: 575 STKYRIHLAGYTKAGDGAESKYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPEI 628
             +Y+  +    + G    S+   +       P +NP N+  + S P  ++I W  +  +
Sbjct: 695 FVRYQFRVIAMNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSM 754

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           E N P  +YR+ W+       W ++ V +     L +     + PY++KV
Sbjct: 755 EQNGPGLEYRVTWKPQGAPVEWEEETVTN---HTLRVMTPAVYAPYDVKV 801



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 133/575 (23%), Positives = 230/575 (40%), Gaps = 51/575 (8%)

Query: 53   LFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L C F  +P     W K  +  P+    R        +L I      D GSY+C V N +
Sbjct: 459  LHCKFFASPEAIVSWQKVEEAKPL--EGRRYHIYENGTLQINRTTEEDAGSYSCWVENSI 516

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECK----ASGLPEPEIHWVHNGKPI 166
            G+  + + +L +  A    V P+     +   +   C+    A      ++ W  +G+  
Sbjct: 517  GKT-AVTANLDIRNATKLRVSPKNPRIPKLHMLELHCESKCDAHLKHSLKLSWSKDGEAF 575

Query: 167  S-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
                  + R  +    +TI N+   D G Y C+A   L        V VL    ++ + P
Sbjct: 576  EINGTEDGRIIIDGANLTISNITLEDQGIYCCSAHTDLDSAADITQVTVL----DVPDPP 631

Query: 226  KDEYTVD--GKTVVLTCRVFGAPKPE-----VNWIHNQKELTGGRYTILETGDLKITDVA 278
            ++ +  +   ++V LT               V +  N++EL  GR+  L     K T V 
Sbjct: 632  ENLHLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEEL--GRWEELTRVQGKKTTVI 689

Query: 279  FADSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSAT------ 326
               +     ++   A N++G +Q S      E         P++  V+A Q         
Sbjct: 690  LPLAPFVRYQFRVIAMNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWE 749

Query: 327  -FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
              +    + P L+  + W     P+++E E       +++L V   +         +A  
Sbjct: 750  PLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TVTNHTLRVMTPAVYAPYDVKVQAIN 805

Query: 386  ELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKAVVSWNPVSPQSLRGHFRGYKVQT 442
            +L       ++T+    + P    +I    VI++    V+W+ +    + G  +GY++  
Sbjct: 806  QLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQINW 865

Query: 443  WTEK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
            W  K   DG    +E+ + K  G+  +  V      S+    VLA+N    GP SE   F
Sbjct: 866  WKTKSLLDGRTHPKEVNILKFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYVF 925

Query: 498  VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERL 556
             TPEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T ++G L +  
Sbjct: 926  QTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGNLTGYLLQYQIINDTYEIGELNDI- 984

Query: 557  PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
              I+ P+  S  L+ L  +T+Y+ +L   T  G G
Sbjct: 985  -NITTPSKPSWHLSNLNATTRYKFYLRACTSKGCG 1018



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 170/434 (39%), Gaps = 70/434 (16%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSD-RISQGNYGKSLIIK---HVEFSDQGSYTCEVS 107
           ++ C   G P P   W+KD  P   +D RI   N   +  I    H+    QG Y C  S
Sbjct: 54  QIECEAKGNPEPTFTWTKDDNPFYFTDPRIITSNSSGTFRIPNEGHISHF-QGKYRCFAS 112

Query: 108 NGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECK-ASGLPEPEIHWVH-N 162
           N +G A S  I+  V + P F    ++P  +   E + +   C    GLP   I+W++  
Sbjct: 113 NKLGIAMSEEIEFIVPSVPKFPKENIDP--LEVEEGDPIVLPCNPPKGLPPLHIYWMNIE 170

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLA 216
            + I Q       + G   +   N+ + D+ N Y C A        +  +   + VN L 
Sbjct: 171 LEHIEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLK 228

Query: 217 HA--------------------PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEV 250
           HA                    P +   P +  +      + G+T++L C   G P P+V
Sbjct: 229 HANDSSSSTEIGSKANSIKQRKPRLLLPPTESGSESSITILKGETLLLECFAEGLPTPQV 288

Query: 251 NWIHNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH 309
           +W     +L  GR T    G  LKI +V++ D G Y C A N LGTA     + V+E   
Sbjct: 289 DWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTATNFLGTATHDFHVIVEEPPR 348

Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID---FESEPRFVQSNDYSL 366
            T +P+      G +    C A  +P  + +I W     PID   F  +  F +     +
Sbjct: 349 WTKKPQSAVYSTGSNGILLCEAEGEP--QPTIKWRVNGSPIDNHPFAGDVVFPR----EI 402

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTV-----QVPLEAPSNFTLI---------Q 412
           + T      +G Y C A      I A A + +      +  E   N+  +         +
Sbjct: 403 SFTNLQPNHTGVYQCEASNVHGTILANANINIVDVRPLIQTEDEENYATVVGYSAFLHCK 462

Query: 413 VIDAKKAVVSWNPV 426
              + +A+VSW  V
Sbjct: 463 FFASPEAIVSWQKV 476



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 109/309 (35%), Gaps = 47/309 (15%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPN--PRRKVGPNRITIENLRKSDTGNYGC 197
           +E    EC+A G PEP   W  +  P     P        G  RI  E       G Y C
Sbjct: 50  DEYFQIECEAKGNPEPTFTWTKDDNPFYFTDPRIITSNSSGTFRIPNEGHISHFQGKYRC 109

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN 255
            A+N LG    +    ++   P+  +   D   V +G  +VL C    G P   + W++ 
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKENIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNI 169

Query: 256 QKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTH 309
           + E      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV    H
Sbjct: 170 ELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKH 229

Query: 310 ITDQPEDYEVEA-----------------------------GQSATFRCNAVSDPSLKLS 340
             D     E+ +                             G++    C A   P+ ++ 
Sbjct: 230 ANDSSSSTEIGSKANSIKQRKPRLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVD 289

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
              + G  P   E++  + +    +L +   S  D G Y C A   L      AT    V
Sbjct: 290 WNKIGGDLPKGRETKENYGK----TLKIENVSYQDKGNYRCTATNFL----GTATHDFHV 341

Query: 401 PLEAPSNFT 409
            +E P  +T
Sbjct: 342 IVEEPPRWT 350


>gi|281343741|gb|EFB19325.1| hypothetical protein PANDA_017735 [Ailuropoda melanoleuca]
          Length = 1037

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 174/631 (27%), Positives = 268/631 (42%), Gaps = 49/631 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P   S++I    +   L I   +  D GSY 
Sbjct: 264 AAKGATVKLECFALGNPVPQINWRRSDGLPF--SNKIKLRKFNGVLEIPDFQQEDTGSYE 321

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G   +    L+  A P++    + +  A E+ + +EC+ASG P+P   W+ NG
Sbjct: 322 CIAENSRGRNVARG-RLTYYAKPHWVQLIKDVEIAVEDNLFWECRASGKPKPSYRWLKNG 380

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + +       R ++    +TI NL  +D+G + C A N  G VY    + V+A AP+ ++
Sbjct: 381 EALVL---EERIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSK 437

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNW-----IHNQKELTGGRYTILETGDLKITD 276
            P  +      G  V L C+   +PKP  +W     I  + E    R + L+ G LKI +
Sbjct: 438 TPMKKLIQVQVGSMVSLDCKPRASPKPLCSWKKGDVIVQENE----RISFLKDGGLKIAN 493

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
           V  AD G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP 
Sbjct: 494 VTKADVGTYTCIAENQFGKANGTTRLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPL 553

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
           L +   W       DF+ +    +    S+   L +       SG+Y C  QT +D + +
Sbjct: 554 LDIIFTWYFNGALTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSS 613

Query: 393 QATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEK---- 446
            A L V+     P N  + ++ D   A +SW     + +  H     Y VQ  T      
Sbjct: 614 AADLIVRGSPGPPENVKVDEITDT-TAQLSWK----EGIDNHSPVISYSVQARTPFSVGW 668

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 669 QTATTVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 726

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S  +   GS S   + W  V  E  NG   GY + ++ +  T     ++ +    D 
Sbjct: 727 VPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTN---WIQTVVTSPDT 783

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y + +  Y   G+G  S    +F     P   P  V     + + 
Sbjct: 784 PRYVFRNESIVPFSLYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTIAPSQVSANSLSSSE 843

Query: 618 LVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
           + +SW  +P    N     Y +  R  N GE
Sbjct: 844 IEVSWNTIPWKLSNGHLLGYEV--RYWNNGE 872



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 157/618 (25%), Positives = 239/618 (38%), Gaps = 48/618 (7%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V  AK       ++           P   V+ PE + AA
Sbjct: 206 LYIAKVESSDVGNYTCVVTSTVTNAKVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 265

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P S       RK     + I + ++ DTG+Y C
Sbjct: 266 KGATVKLECFALGNPVPQINWRRSDGLPFSNKI--KLRKFN-GVLEIPDFQQEDTGSYEC 322

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   ++V    L +   P   +  KD        +   CR  G PKP   W+ N
Sbjct: 323 IAENSRG---RNVARGRLTYYAKPHWVQLIKDVEIAVEDNLFWECRASGKPKPSYRWLKN 379

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITD 312
            + L       +E G L I+++   DSG + C A NK G    S  L V         T 
Sbjct: 380 GEALVLEERIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKTP 439

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
             +  +V+ G   +  C   + P    S  W +G   +       F++  D  L +   +
Sbjct: 440 MKKLIQVQVGSMVSLDCKPRASPKPLCS--WKKGDVIVQENERISFLK--DGGLKIANVT 495

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQ 429
           + D G YTC A+ +         L V  P     APSN   + V   +  ++        
Sbjct: 496 KADVGTYTCIAENQFGKANGTTRLVVTEPTRITLAPSN---MDVSVGESVILPCQVQHDP 552

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
            L   F  Y     T+   +GS  E +   G S+   + + +    +   V       + 
Sbjct: 553 LLDIIFTWYFNGALTDFKKDGSHFEKV--GGSSSGDLMIRNIQLKHSGKYVCMVQTGVDS 610

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
             S     V   G PG  ++++   +  +   L W +    +  ++ Y +  Q+     V
Sbjct: 611 VSSAADLIV--RGSPGPPENVKVDEITDTTAQLSWKEGIDNHSPVISYSV--QARTPFSV 666

Query: 550 G-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPF 602
           G      +P + D  T +A +  L P  +Y   +    K G G  S      +    VP 
Sbjct: 667 GWQTATTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 726

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
             P  V G G + + LVI+W  +PE   N   F Y + +R       W Q  V       
Sbjct: 727 VPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTN-WIQTVVTSPDTPR 785

Query: 663 LVLANQPT--FQPYEIKV 678
            V  N+    F  YE+KV
Sbjct: 786 YVFRNESIVPFSLYEVKV 803



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 168/699 (24%), Positives = 269/699 (38%), Gaps = 115/699 (16%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  +   +RI   N   +L I ++  +D G + C   N  G   
Sbjct: 364  CRASGKPKPSYRWLKNGEALVLEERIQIEN--GALTISNLNVTDSGMFQCIAENKHGLVY 421

Query: 115  SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
            S S +L V+A AP F+  P  + I       V+ +CK    P+P   W   G  I Q   
Sbjct: 422  S-SAELKVVASAPDFSKTPMKKLIQVQVGSMVSLDCKPRASPKPLCSW-KKGDVIVQE-- 477

Query: 172  NPRRK-VGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
            N R   +    + I N+ K+D G Y C A N  G       + V+     IT AP +   
Sbjct: 478  NERISFLKDGGLKIANVTKADVGTYTCIAENQFGKANGTTRL-VVTEPTRITLAPSNMDV 536

Query: 231  VDGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDV 277
              G++V+L C+V   P  ++   W  N             E  GG      +GDL I ++
Sbjct: 537  SVGESVILPCQVQHDPLLDIIFTWYFNGALTDFKKDGSHFEKVGGS----SSGDLMIRNI 592

Query: 278  AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
                SG+Y C  +  + +   +  L V+        PE+ +V+           ++D + 
Sbjct: 593  QLKHSGKYVCMVQTGVDSVSSAADLIVRGSP---GPPENVKVDE----------ITDTTA 639

Query: 338  KLSIVWLRG----SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA-----QTELD 388
            +LS  W  G    S  I +  + R   S  +    T    +D   +T          E +
Sbjct: 640  QLS--WKEGIDNHSPVISYSVQARTPFSVGWQTATTVPEVIDGKTHTATVVELNPWVEYE 697

Query: 389  F--------------IEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
            F              + ++   T +   E P +          + V++W+PV  +   G 
Sbjct: 698  FRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGE 757

Query: 435  -------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
                   FR   V  W +           V + ES        VP S    +V  +N   
Sbjct: 758  GFGYVVAFRPLGVTNWIQTVVTSPDTPRYVFRNES-------IVPFSLYEVKVGVYNNKG 810

Query: 488  NGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKY--- 541
             GP S + +  + E  P    S + A  L SS   + W  +  +  NG L+GY+++Y   
Sbjct: 811  EGPFSPVTTVFSAEEEPTIAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNN 870

Query: 542  ---QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF 598
               +S    KVG              TSA+L GL+ +  Y   +  Y  AG G  S  + 
Sbjct: 871  GEEESSSKVKVGG-----------NETSARLRGLKSNLAYYTAVRAYNSAGAGPFSTTVN 919

Query: 599  YV-----PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQD 653
                   P + P NV    +T   ++++W  +  +E+ +    Y++F+R  +     N  
Sbjct: 920  ATTKKTPPSQPPGNVVWN-ATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQ----NNV 974

Query: 654  DVLDWRQS--ELVLANQPTFQPYEIKVVQTWTEKDGEGS 690
             VL+  ++  EL+L   P  + Y I+V  T    DG  S
Sbjct: 975  QVLNTNKTSAELLL---PIKEDYIIEVKATTDGGDGTSS 1010



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 148/374 (39%), Gaps = 28/374 (7%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS-QGNYGKSLIIKHVEFSDQGSY 102
           V   +KK+ L C   G P P   W  +G  IN S     + N G  ++I      D GSY
Sbjct: 64  VGSEDKKITLNCEARGNPSPHYRWQLNGSDINLSMEYRYKLNGGNLVVINPNRNWDTGSY 123

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEI 157
            C  +N +G   S    L       F T     ++  E + V   C   G P    E   
Sbjct: 124 QCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLC---GPPPHSGELSY 180

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDVYVN 213
            W+ N  P S    + RR V      + I  +  SD GNY C  T+++    V       
Sbjct: 181 AWIFNEYP-SFVEEDSRRFVSQETGHLYIAKVESSDVGNYTCVVTSTVTNAKVLGSPTPL 239

Query: 214 VL-------AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           VL        + P+I  + P+      G TV L C   G P P++NW  +       +  
Sbjct: 240 VLRSDGVMGEYEPKIEVQFPETLPAAKGATVKLECFALGNPVPQINWRRSDGLPFSNKIK 299

Query: 266 ILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
           + +  G L+I D    D+G Y C A N  G     G LT     H     +D E+    +
Sbjct: 300 LRKFNGVLEIPDFQQEDTGSYECIAENSRGRNVARGRLTYYAKPHWVQLIKDVEIAVEDN 359

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             + C A   P  K S  WL+  E +  E     +Q  + +LT++  +  DSG + C A+
Sbjct: 360 LFWECRASGKP--KPSYRWLKNGEALVLEER---IQIENGALTISNLNVTDSGMFQCIAE 414

Query: 385 TELDFIEAQATLTV 398
            +   + + A L V
Sbjct: 415 NKHGLVYSSAELKV 428



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 125/300 (41%), Gaps = 32/300 (10%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +E++ +T  C+A G P P   W  NG  I+ +     +  G
Sbjct: 47  LLQGPVFIREPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDINLSMEYRYKLNG 106

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N + I   R  DTG+Y C ATNSLG +         A+        +   +V +G+ VV
Sbjct: 107 GNLVVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVV 166

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        WI N+     E    R+   ETG L I  V  +D G YTC 
Sbjct: 167 LLC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVESSDVGNYTCV 222

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
             + +  A+  GS   L ++    + +         PE      G +    C A+ +P  
Sbjct: 223 VTSTVTNAKVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGATVKLECFALGNPVP 282

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +++  W R S+ + F ++ +  + N   L +    + D+G Y C A+       A+  LT
Sbjct: 283 QIN--WRR-SDGLPFSNKIKLRKFNGV-LEIPDFQQEDTGSYECIAENSRGRNVARGRLT 338



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 133/588 (22%), Positives = 217/588 (36%), Gaps = 67/588 (11%)

Query: 51   VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            V L C    +P P   W K  V +  ++RIS    G  L I +V  +D G+YTC   N  
Sbjct: 452  VSLDCKPRASPKPLCSWKKGDVIVQENERISFLKDG-GLKIANVTKADVGTYTCIAENQF 510

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI--HWVHNGKPIS- 167
            G+A   +  L V      T+ P  ++ +  E+V   C+    P  +I   W  NG     
Sbjct: 511  GKANG-TTRLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALTDF 569

Query: 168  QAPPNPRRKVGPNR---ITIENLRKSDTGNYGCNATNSLGYVYK--DVYVNVLAHAPEIT 222
            +   +   KVG +    + I N++   +G Y C     +  V    D+ V      PE  
Sbjct: 570  KKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENV 629

Query: 223  EAPKDEYT-----------VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD 271
            +   DE T           +D  + V++  V       V W   Q   T       +T  
Sbjct: 630  KV--DEITDTTAQLSWKEGIDNHSPVISYSVQARTPFSVGW---QTATTVPEVIDGKTHT 684

Query: 272  LKITDVAFADSGEYTCFARNKLGTAQGS-GSLTVKEHTHITDQPEDYEVEAGQSATFRCN 330
              + ++      E+   A NK+G  + S  S  V+    + + P   EV  G  +     
Sbjct: 685  ATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPS-EVSGGGGSRSELV 743

Query: 331  AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
               DP  +     L+  E   +    R +   ++  TV  S   D+ +Y  R ++ + F 
Sbjct: 744  ITWDPVPEE----LQNGEGFGYVVAFRPLGVTNWIQTVVTSP--DTPRYVFRNESIVPFS 797

Query: 391  EAQATLTV-------------------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
              +  + V                   + P  APS  +    + + +  VSWN +  +  
Sbjct: 798  LYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTIAPSQVS-ANSLSSSEIEVSWNTIPWKLS 856

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
             GH  GY+V+ W   + E S +  +   G  T+  +         +  V A+N A  GP 
Sbjct: 857  NGHLLGYEVRYWNNGEEESSSKVKV--GGNETSARLRGLKSNLAYYTAVRAYNSAGAGPF 914

Query: 492  SEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKV 549
            S  ++  T +  P             +   L W  VK  +    + GYK+ Y++     V
Sbjct: 915  STTVNATTKKTPPSQPPGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNV 974

Query: 550  GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL 597
              L        +   TSA+L  L     Y I +   T  GDG  S+ +
Sbjct: 975  QVL--------NTNKTSAELL-LPIKEDYIIEVKATTDGGDGTSSEQI 1013


>gi|136256388|ref|NP_851300.2| contactin-1a precursor [Danio rerio]
 gi|134054472|emb|CAM73230.1| cntn1a [Danio rerio]
          Length = 1032

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 188/725 (25%), Positives = 300/725 (41%), Gaps = 98/725 (13%)

Query: 24  ISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQ 82
           I+    R  P    V      AL  + + L C   G P+PQ  W K DGV   P  R   
Sbjct: 240 IAERSLRKYPADIKVKSPDSWALLGQNITLECFALGNPIPQIRWRKLDGV--LPPLRHDV 297

Query: 83  GNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET 142
              G  L +  +++ D+G Y CE  N  G+   +   L V  AP +    E I+++E + 
Sbjct: 298 SMSGALLHLYSLQYEDEGLYECEADNSKGK-DWHKTHLYVEGAPDWL---EQISSSEVDI 353

Query: 143 ---VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA 199
                  C+ASG P+P +H++ NG    +           + +    L   D+G Y C A
Sbjct: 354 GGDYIMSCQASGKPKPHVHFLKNGHMYMKG----------HEVRFSRLGFEDSGMYQCVA 403

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKT--VVLTCRVFGAPKPEVNWIHNQK 257
            N  G ++ +  + V A AP     P     +  +   VV  CR   AP+P + W    +
Sbjct: 404 ENRHGVIHANAELRVFASAPSFQYNPVKPKLLGARNGRVVFECRPRAAPRPNITWSKGTE 463

Query: 258 EL-TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
            L    R +I   G L++ +++ +D G+YTCFA N  G A  +GSL++ + T IT  P +
Sbjct: 464 LLHNSSRISIWLDGSLELLNISKSDEGKYTCFAENDRGRANSTGSLSITDATKITLAPSN 523

Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL-- 374
            +V  G+ A   C A  DP L L+ +W      ID + + +  Q    S + T SSEL  
Sbjct: 524 ADVSVGEDARMECVASHDPGLDLTFIWSLDGHTIDLQRDAQHYQRKMDSASGTSSSELLI 583

Query: 375 ------DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSW----N 424
                  +G+Y+C AQT +D   A A L V+ P   P    + +V      V+ W    +
Sbjct: 584 THTQLRHAGRYSCTAQTPVDNTTASAELVVRGPPGPPGGVRVDEVTSDSVRVL-WSHGTD 642

Query: 425 PVSPQSLRGHFRGYKVQ---TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 481
            +SP S       Y VQ   +  ++D   +    +  +G +    V   +P ++   RV+
Sbjct: 643 NLSPISR------YTVQLRESAAQQDWRDAATSPVNVEGNAEMATVVNLLPWTEYEFRVI 696

Query: 482 AFNGAYNGPPSE------------IISFVTPEGVPGTVQSLEA--IPLGSSAFYLKWVKP 527
           A N    GPPSE            I++     G  GT + L     P+ S  +Y      
Sbjct: 697 ATNTLGTGPPSEPSPKTTTREARPIVAPSDIGGGGGTSRELTITWTPVQSQYYY------ 750

Query: 528 EQPNGVLMGYKIKYQS------VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIH 581
               G   GY I ++       ++ T   P +++  +  DP         + PST++ + 
Sbjct: 751 ----GSNFGYIIAFKPHNDPEWLRVTVTDPEVQKYVH-KDPK--------IPPSTRFEVK 797

Query: 582 LAGYTKAGDGAESKYLFY-----VPFKNPDNVEGRGSTPNNLVISW--TAMPEIEHNAPH 634
           +  +   G+G  S   F      VP + P   E R  +    ++ W    +P +E     
Sbjct: 798 MKAFNSQGEGPFSNSAFIYSAQDVPAEAPIITEARALSATEAIVIWVPVQLPTVE----- 852

Query: 635 FKYRI-FWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRE 693
            +Y++ +WR     EA  Q  ++  R++   L N      Y ++V        G  S R 
Sbjct: 853 -RYQVRYWRESVENEASAQRVLVSSRENHTRLDNMKPDSHYLVEVRACNGAGYGPASQRN 911

Query: 694 LIVNK 698
            I  K
Sbjct: 912 RIYTK 916



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 97/412 (23%), Positives = 149/412 (36%), Gaps = 69/412 (16%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPI------NPSDRISQGNYGKSLIIKHVEFSDQ-GS 101
           +K+ L C     P     W  +   +      +P   +S+GN    L+I   + S   G+
Sbjct: 64  EKITLTCRTRANPPASYRWRLNNAELVLAEGGDPHYSVSEGN----LLISSPDKSKHAGN 119

Query: 102 YTCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKAS-GLPEP-EIH 158
           YTC  SN  G   S    +       F T E E +   E +     C      PE     
Sbjct: 120 YTCVASNQYGSVTSRRARVQFGYLDMFSTDEREAVYVKEGQGAVLLCAPPPHFPEDLSFR 179

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           W+ N  P    P + RR V  +   + I  +R +D+GNY C  ++    + K V+   + 
Sbjct: 180 WMLNEFP-EFIPLDQRRFVSQSTGNLYISTVRSTDSGNYSCFVSSPA--IAKSVFSKFIP 236

Query: 217 HAP-----------EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
             P           +I     D + + G+ + L C   G P P++ W      L   R+ 
Sbjct: 237 LVPIAERSLRKYPADIKVKSPDSWALLGQNITLECFALGNPIPQIRWRKLDGVLPPLRHD 296

Query: 266 ILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
           +  +G  L +  + + D G Y C A N  G       L V+      +Q    EV+ G  
Sbjct: 297 VSMSGALLHLYSLQYEDEGLYECEADNSKGKDWHKTHLYVEGAPDWLEQISSSEVDIGGD 356

Query: 325 ATFRCNAVSDPS-----LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQY 379
               C A   P      LK   ++++G E                 +  ++    DSG Y
Sbjct: 357 YIMSCQASGKPKPHVHFLKNGHMYMKGHE-----------------VRFSRLGFEDSGMY 399

Query: 380 TCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
            C A+     I A A L  +V   APS                +NPV P+ L
Sbjct: 400 QCVAENRHGVIHANAEL--RVFASAPS--------------FQYNPVKPKLL 435



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 96/239 (40%), Gaps = 42/239 (17%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHW-VHNGKPISQAPPNPRRKVGPNRITI 184
           P  T+ PE    + EE +T  C+    P     W ++N + +     +P   V    + I
Sbjct: 52  PLDTIYPE---ESPEEKITLTCRTRANPPASYRWRLNNAELVLAEGGDPHYSVSEGNLLI 108

Query: 185 ENLRKS-DTGNYGCNATNSLGYVYKDV------YVNVLAHAPEITEAPKDEYTVDGKTVV 237
            +  KS   GNY C A+N  G V          Y+++ +     T+  +  Y  +G+  V
Sbjct: 109 SSPDKSKHAGNYTCVASNQYGSVTSRRARVQFGYLDMFS-----TDEREAVYVKEGQGAV 163

Query: 238 LTCRVFGAPKPEV------NWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTC 287
           L C    AP P         W+ N+      L   R+    TG+L I+ V   DSG Y+C
Sbjct: 164 LLC----APPPHFPEDLSFRWMLNEFPEFIPLDQRRFVSQSTGNLYISTVRSTDSGNYSC 219

Query: 288 FARNKLGTAQGSGS----LTVKEHTHITDQPEDYEVEA-------GQSATFRCNAVSDP 335
           F  +    A+   S    L       +   P D +V++       GQ+ T  C A+ +P
Sbjct: 220 FVSSP-AIAKSVFSKFIPLVPIAERSLRKYPADIKVKSPDSWALLGQNITLECFALGNP 277



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 23/199 (11%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK-DGEGSIRELIVN 458
            VP EAP   T  + + A +A+V W PV   ++      Y+V+ W E  + E S + ++V+
Sbjct: 821  VPAEAPI-ITEARALSATEAIVIWVPVQLPTVER----YQVRYWRESVENEASAQRVLVS 875

Query: 459  KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE---IISFVTPEGVPGTVQSLEAIPL 515
              E+ T  +D   P S     V A NGA  GP S+   I +  +P   P  + S +    
Sbjct: 876  SRENHT-RLDNMKPDSHYLVEVRACNGAGYGPASQRNRIYTKKSPPSRPPKIISTKMHYS 934

Query: 516  GSSAFYLKWVKPEQPN--GVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLE 573
            GSS   + W K E  N    + GYK+ Y+   G   G L     Y ++  +    +   E
Sbjct: 935  GSS-INIAWEKVESLNNESTVAGYKVLYRQ-HGQPSGTL-----YTTEKQSIDLPMRRGE 987

Query: 574  PSTKYRIHLAGYTKAGDGA 592
                Y + +  +++ GDGA
Sbjct: 988  ----YLVEVRAHSEGGDGA 1002


>gi|432891359|ref|XP_004075560.1| PREDICTED: contactin-5-like [Oryzias latipes]
          Length = 1054

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 158/610 (25%), Positives = 254/610 (41%), Gaps = 57/610 (9%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGS 101
           +A +   V L C   G P+P   W K    +P     R SQ      L I +++  D G 
Sbjct: 271 LAAKGVTVRLECFALGNPVPTITWRKINGNIPKRARLRKSQA----VLEIPNIQQDDSGV 326

Query: 102 YTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVH 161
           Y C+  N  G   ++   L V   P +            E + +ECKA   P P   W+ 
Sbjct: 327 YECKAENPRG-GTAFKGHLQVYTLPQWVRMINDTQMDSGEKLQWECKAISRPRPTYRWLR 385

Query: 162 NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           NG P++      R ++    ++I  ++++D+G Y C A N  G +Y +  + +LA AP  
Sbjct: 386 NGLPLAS---QGRVEIMNGELSIHKVQQTDSGMYQCVAENKYGAIYSNAELKILASAPVF 442

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
              P       GK   L C+   +PKP + W    + +    R  +L    LKI + + A
Sbjct: 443 FHNPVRVIATLGKDAFLECKPRASPKPRITWKREDRRIQPNKRIILLRNNTLKIVNSSRA 502

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D G Y C A N+LG+A+ +  L VKE   +   P   EV  G+S    C A  D SL ++
Sbjct: 503 DEGNYVCRAENQLGSAELTAVLWVKEAMRVVLSPSKVEVTVGESVVLSCKATHDTSLDVA 562

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD----------SGQYTCRAQTELDFI 390
             W    +PI F+ +      N +    T+SS +D          +G+Y CRAQT  D +
Sbjct: 563 FQWFFNQKPIIFQQD-----GNHFEYIQTQSSTVDLMIRSILLRHAGKYGCRAQTSADSV 617

Query: 391 EAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHFRGYKVQTW 443
             +A L V+ P   P    +++ I    A +SW       +P+S  +L+     + +   
Sbjct: 618 FTEAELLVRGP-PGPPGVVIVEEITDHTATLSWTRGLDNHSPISTYNLQAR-SPFSLGWQ 675

Query: 444 TEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEG 502
           T K     +       G+  +    +  P  +   RV+A N    G PS     V T E 
Sbjct: 676 TVKTDPDPV------TGDMESAMAVELNPWVEYEFRVVASNAIGTGDPSAPSRRVRTKEA 729

Query: 503 VPGTVQSLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQS--VKGTKVGPLLERLP 557
           VP    S  +   G      + W  V  E  NG   GY + +++   +G K     E++ 
Sbjct: 730 VPSVAPSNVSGGDGRRHELVISWEPVSEEFQNGEGFGYIVAFRANGTRGWK-----EKMV 784

Query: 558 YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEGRG 612
             +D TT   +     P T + + +  Y   GDG  S+ +        P + P +V+   
Sbjct: 785 TSADSTTYKYRDETFPPLTPFEVKVGVYNNKGDGPFSQVVIIHSAEGEPREPPSDVKAYS 844

Query: 613 STPNNLVISW 622
            + + + ++W
Sbjct: 845 ISSSEIRVAW 854



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 154/620 (24%), Positives = 228/620 (36%), Gaps = 52/620 (8%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS----IDLSVLAA-----PYFTVE-PEFINA 137
           +L I  V+ SD GSY C V N V  A+  S    + L          P   V  P  + A
Sbjct: 213 NLYISKVQPSDVGSYICLVKNPVTNARVLSPPTPLTLKTDGVMGEYEPKIEVHFPSSVLA 272

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   NG      P   R +     + I N+++ D+G Y 
Sbjct: 273 AKGVTVRLECFALGNPVPTITWRKING----NIPKRARLRKSQAVLEIPNIQQDDSGVYE 328

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A N  G      ++ V    P+      D     G+ +   C+    P+P   W+ N 
Sbjct: 329 CKAENPRGGTAFKGHLQVYT-LPQWVRMINDTQMDSGEKLQWECKAISRPRPTYRWLRNG 387

Query: 257 KELTG-GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT-DQP 314
             L   GR  I+  G+L I  V   DSG Y C A NK G    +  L +     +    P
Sbjct: 388 LPLASQGRVEIM-NGELSIHKVQQTDSGMYQCVAENKYGAIYSNAELKILASAPVFFHNP 446

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
                  G+ A   C   + P  K  I W R    I  +   R +   + +L +  SS  
Sbjct: 447 VRVIATLGKDAFLECKPRASP--KPRITWKREDRRI--QPNKRIILLRNNTLKIVNSSRA 502

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
           D G Y CRA+ +L   E  A L V+  +    + + ++V   +  V+S       SL   
Sbjct: 503 DEGNYVCRAENQLGSAELTAVLWVKEAMRVVLSPSKVEVTVGESVVLSCKATHDTSLDVA 562

Query: 435 FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
           F+ +  Q       +G+  E I  +  +    +   +          A   A +      
Sbjct: 563 FQWFFNQKPIIFQQDGNHFEYIQTQSSTVDLMIRSILLRHAGKYGCRAQTSADSVFTEAE 622

Query: 495 ISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSV-----KGTKV 549
           +    P G PG V   E   +      L W +    +  +  Y ++ +S      +  K 
Sbjct: 623 LLVRGPPGPPGVVIVEE---ITDHTATLSWTRGLDNHSPISTYNLQARSPFSLGWQTVKT 679

Query: 550 GPLLERLPYISDPTT---TSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYV 600
            P         DP T    SA    L P  +Y   +      G G  S      +    V
Sbjct: 680 DP---------DPVTGDMESAMAVELNPWVEYEFRVVASNAIGTGDPSAPSRRVRTKEAV 730

Query: 601 PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ 660
           P   P NV G     + LVISW  + E   N   F Y + +R + T   W +  V     
Sbjct: 731 PSVAPSNVSGGDGRRHELVISWEPVSEEFQNGEGFGYIVAFRANGT-RGWKEKMVTSADS 789

Query: 661 SELVLANQ--PTFQPYEIKV 678
           +     ++  P   P+E+KV
Sbjct: 790 TTYKYRDETFPPLTPFEVKV 809



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 164/649 (25%), Positives = 264/649 (40%), Gaps = 78/649 (12%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           +K++  C     P P   W ++G+P+    R+   N    L I  V+ +D G Y C   N
Sbjct: 365 EKLQWECKAISRPRPTYRWLRNGLPLASQGRVEIMN--GELSIHKVQQTDSGMYQCVAEN 422

Query: 109 GVGEAKSYSIDLSVLA-APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPIS 167
             G   S + +L +LA AP F   P  + A   +    ECK    P+P I W    + I 
Sbjct: 423 KYGAIYS-NAELKILASAPVFFHNPVRVIATLGKDAFLECKPRASPKPRITWKREDRRIQ 481

Query: 168 QAPPNPRR-KVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
              PN R   +  N + I N  ++D GNY C A N LG       + V      +    K
Sbjct: 482 ---PNKRIILLRNNTLKIVNSSRADEGNYVCRAENQLGSAELTAVLWVKEAMRVVLSPSK 538

Query: 227 DEYTVDGKTVVLTCRVFGAPKPEV--NWIHNQKELT----GGRYTILETG----DLKITD 276
            E TV G++VVL+C+       +V   W  NQK +     G  +  ++T     DL I  
Sbjct: 539 VEVTV-GESVVLSCKATHDTSLDVAFQWFFNQKPIIFQQDGNHFEYIQTQSSTVDLMIRS 597

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEH---------THITDQPEDYEVEAGQS--- 324
           +    +G+Y C A+    +      L V+             ITD         G     
Sbjct: 598 ILLRHAGKYGCRAQTSADSVFTEAELLVRGPPGPPGVVIVEEITDHTATLSWTRGLDNHS 657

Query: 325 --ATFRCNAVSDPSLKLSIVWLRGSEPI--DFESEPRFVQSN---DYSLTVTKSSELDSG 377
             +T+   A S  SL    V     +P+  D ES    V+ N   +Y   V  S+ + +G
Sbjct: 658 PISTYNLQARSPFSLGWQTV-KTDPDPVTGDMESA-MAVELNPWVEYEFRVVASNAIGTG 715

Query: 378 QYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKK--AVVSWNPVSPQSLRGHF 435
             +  ++        +      VP  APSN   +   D ++   V+SW PVS +   G  
Sbjct: 716 DPSAPSR--------RVRTKEAVPSVAPSN---VSGGDGRRHELVISWEPVSEEFQNGEG 764

Query: 436 RGYKVQTWTEKDGEGSIRELIVNKGESTTTEV--DKFVPASKNFARVLAFNGAYNGPPSE 493
            GY V      +G    +E +V   +STT +   + F P +    +V  +N   +GP S+
Sbjct: 765 FGYIVAF--RANGTRGWKEKMVTSADSTTYKYRDETFPPLTPFEVKVGVYNNKGDGPFSQ 822

Query: 494 IISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPL 552
           ++   + EG P    S ++A  + SS   + W  P    G   GY++++      +    
Sbjct: 823 VVIIHSAEGEPREPPSDVKAYSISSSEIRVAWKPPSPGPGKPKGYEVQFWKETEQEESGK 882

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-----AESKYLFYVPFKNPDN 607
            +R    +    T   L GL+ +++Y I + G+   G G      E++   Y P + P N
Sbjct: 883 KQR----TVKNETFMILTGLDGNSQYLITVKGFNNIGQGPACAAIEARTKKYPPVQPPVN 938

Query: 608 V----EGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
           +    EG     NN+ +SW  +   E+ +    Y +  ++   G  +NQ
Sbjct: 939 LAWIQEG-----NNVSLSWEPVKAKENESDVIGYMVLVKQE--GRGYNQ 980



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 112/284 (39%), Gaps = 33/284 (11%)

Query: 125 APYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P F  EP+   F   + E  V   C+A G P P   W  NG  +          +  + 
Sbjct: 58  GPVFIQEPDDIIFSLGSGERKVMLHCEARGNPPPTYSWYINGTRVDSDTDYRYSFIDGDL 117

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTC 240
           I       +D G Y C + NS G +     +   A+    +   +   +V +G+ VVL C
Sbjct: 118 IITNASEITDFGKYQCKSENSFGSILSRDALLQFAYLGAFSTKSRGAVSVREGQGVVLMC 177

Query: 241 RVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARN 291
               +P P       +W+ N+          R+   +TG+L I+ V  +D G Y C  +N
Sbjct: 178 ----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQDTGNLYISKVQPSDVGSYICLVKN 233

Query: 292 KLGTAQGSG---SLTVKEHTHITDQPEDYEVE------AGQSATFR--CNAVSDPSLKLS 340
            +  A+       LT+K    + +     EV       A +  T R  C A+ +P    +
Sbjct: 234 PVTNARVLSPPTPLTLKTDGVMGEYEPKIEVHFPSSVLAAKGVTVRLECFALGNPV--PT 291

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           I W + +  I   +  R  Q+    L +    + DSG Y C+A+
Sbjct: 292 ITWRKINGNIPKRARLRKSQA---VLEIPNIQQDDSGVYECKAE 332


>gi|432859190|ref|XP_004069057.1| PREDICTED: contactin-2-like [Oryzias latipes]
          Length = 1182

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 170/661 (25%), Positives = 279/661 (42%), Gaps = 74/661 (11%)

Query: 25   SASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQG 83
            +A+  + AP  +     +  AL    V L C   G P+P+  W K DG  + PS   S  
Sbjct: 376  NANPRKSAPTIKVRFPAETYALTGHTVTLECFAYGNPVPKLRWRKVDG--LMPSKTGSSA 433

Query: 84   NYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET- 142
              G +LI+  + F D+G Y CE  N  G   ++   +SV A P +    + ++ +E E  
Sbjct: 434  E-GPTLILPDLSFDDEGVYECEAYNSEGR-DTHQGRISVQAQPDWV---QVMSDSEVEIS 488

Query: 143  --VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
              + + C +SG P P + W+ NG+P+       R +V    + I +L   D+G Y C A 
Sbjct: 489  SELLWSCLSSGKPRPSVRWLRNGQPVIT---QDRVEVNGANLKISSLALDDSGMYQCVAE 545

Query: 201  NSLGYVYKDVYVNVLAHAPEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKE 258
            N  G +Y    + V   AP+    P         G  V++ CR   APKP + W    + 
Sbjct: 546  NKHGTIYASAELRVQVQAPDFRLNPVRRLIPAARGGQVMIECRPRAAPKPILFWSRGTEL 605

Query: 259  LT-GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDY 317
            L    R T+   G L I +V+ AD G+YTCFA N LG A  +G L+V++ T IT  P + 
Sbjct: 606  LANSSRITVAPDGTLWIRNVSRADEGKYTCFAENYLGKANSTGHLSVRDATKITLAPSNA 665

Query: 318  EVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP-RFV----QSNDYSLTVTKSS 372
            ++  G++ T +C+A  DP++ L+  W      +D E    R+     Q N   L +  + 
Sbjct: 666  DINQGENVTLQCHASHDPTMDLTFTWALKGVLLDLEDPAGRYFRIQGQENIGDLLIVNAQ 725

Query: 373  ELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
               +G +TC AQT +D   A A L V+ P   P    L++++      + W+        
Sbjct: 726  LSQAGIFTCTAQTVVDSASASARLVVRAP-PGPPGGILVKMVTDTSVELWWS-------H 777

Query: 433  GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF------ARVLAFNGA 486
            GH            D    I + I+    S ++E  K      N       ARV+     
Sbjct: 778  GH------------DNHSPIGKYIIMGQSSLSSEWKKMRTEPANIEGNAESARVIGLMAW 825

Query: 487  YNGPPSEIISFVTPEGVP----GTVQSLEAIPLGSSA-----------FYLKW--VKPEQ 529
             +     I S +  +G P      +++  A P  + +             + W  +  E 
Sbjct: 826  MDYRFQVIASNILGKGEPSQPSARIRTQPAAPTVAPSGLGGGGGDHHELIVTWTPMAREY 885

Query: 530  PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
             NG   GY + ++  KGT     + R+P++          + L P T + + +  Y + G
Sbjct: 886  QNGDGFGYILAFRR-KGTAAWSEV-RIPHVESSRHVYYNQS-LAPYTPFEVKIQAYNRKG 942

Query: 590  DGAESKYLFY-----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI-FWRR 643
             G  S+ +        P   P ++     +   + +SW  + ++  N     Y I +WR+
Sbjct: 943  VGPFSQTVEVHSAEEEPTVGPASINATALSAFEIQVSWEPVQQLSANGILRGYEIRYWRQ 1002

Query: 644  H 644
            H
Sbjct: 1003 H 1003



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 170/710 (23%), Positives = 282/710 (39%), Gaps = 104/710 (14%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C+  G P P   W ++G P+   DR+     G +L I  +   D G Y C   N  G   
Sbjct: 495  CLSSGKPRPSVRWLRNGQPVITQDRVEVN--GANLKISSLALDDSGMYQCVAENKHGTIY 552

Query: 115  SYSIDLSV-LAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
            + S +L V + AP F + P    I AA    V  EC+    P+P + W    + ++ +  
Sbjct: 553  A-SAELRVQVQAPDFRLNPVRRLIPAARGGQVMIECRPRAAPKPILFWSRGTELLANSS- 610

Query: 172  NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
              R  V P+  + I N+ ++D G Y C A N LG      +++V   A +IT AP +   
Sbjct: 611  --RITVAPDGTLWIRNVSRADEGKYTCFAENYLGKANSTGHLSV-RDATKITLAPSNADI 667

Query: 231  VDGKTVVLTCRVFGAPKPEVNWIHNQK------ELTGGRYTILE----TGDLKITDVAFA 280
              G+ V L C     P  ++ +    K      E   GRY  ++     GDL I +   +
Sbjct: 668  NQGENVTLQCHASHDPTMDLTFTWALKGVLLDLEDPAGRYFRIQGQENIGDLLIVNAQLS 727

Query: 281  DSGEYTCFARNKLGTAQGSGSLTVK-----------------------EHTHITDQPEDY 317
             +G +TC A+  + +A  S  L V+                        H H    P   
Sbjct: 728  QAGIFTCTAQTVVDSASASARLVVRAPPGPPGGILVKMVTDTSVELWWSHGHDNHSPIGK 787

Query: 318  EVEAGQSATFRCNAVSDPSLKLSIVWLR-GSEPIDFESEPR------FVQSNDYSLTVTK 370
             +  GQS+             LS  W +  +EP + E           +   DY   V  
Sbjct: 788  YIIMGQSS-------------LSSEWKKMRTEPANIEGNAESARVIGLMAWMDYRFQVIA 834

Query: 371  SSELDSG---QYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVS 427
            S+ L  G   Q + R +T+              P  APS        D  + +V+W P++
Sbjct: 835  SNILGKGEPSQPSARIRTQ-----------PAAPTVAPSG-LGGGGGDHHELIVTWTPMA 882

Query: 428  PQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEV--DKFVPASKNFARVLAFNG 485
             +   G   GY +     + G  +  E+ +   ES+          P +    ++ A+N 
Sbjct: 883  REYQNGDGFGYILAF--RRKGTAAWSEVRIPHVESSRHVYYNQSLAPYTPFEVKIQAYNR 940

Query: 486  AYNGPPSEIISFVTPEGVPGTV--QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKY 541
               GP S+ +   + E  P TV   S+ A  L +    + W  V+    NG+L GY+I+Y
Sbjct: 941  KGVGPFSQTVEVHSAEEEP-TVGPASINATALSAFEIQVSWEPVQQLSANGILRGYEIRY 999

Query: 542  QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV- 600
                  +      R   + +PT   A+++GL PST+Y + +  Y  AG G  S       
Sbjct: 1000 WRQHEREAAADRVRTAGL-EPT---ARVSGLRPSTRYHVAVFAYNSAGTGPSSPRTTVTT 1055

Query: 601  ----PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVL 656
                P + P NV  +    + + + W  +  + + +    Y++ ++     E      +L
Sbjct: 1056 RKPPPNRPPGNVSWKIQG-SQVAVRWDHVTALHNESAVLGYKVLYKH----EDQTVLKLL 1110

Query: 657  DWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEV 706
            D  ++ + L  QP    Y +  +++W E  G+G   E+IV++   T   V
Sbjct: 1111 DKTKTSVSLP-QPKDNGYVVLEIRSWGE-GGDGPAHEIIVSRDSGTGMMV 1158



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 165/677 (24%), Positives = 265/677 (39%), Gaps = 79/677 (11%)

Query: 88  SLIIKHVEFSDQGSYTC--EVSNGVGEAKSYS--IDLSVL-------AAPYFTVE-PEFI 135
           +L +   E +D  +Y C   ++  +    ++S  I LSVL       +AP   V  P   
Sbjct: 335 NLFLAKAEPNDTANYFCFTTINLDISTKSTFSKPIPLSVLPNANPRKSAPTIKVRFPAET 394

Query: 136 NAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP--RRKVGPNRITIENLRKSDTG 193
            A    TVT EC A G P P++ W    + +    P+       GP  I + +L   D G
Sbjct: 395 YALTGHTVTLECFAYGNPVPKLRW----RKVDGLMPSKTGSSAEGPTLI-LPDLSFDDEG 449

Query: 194 NYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWI 253
            Y C A NS G       ++V A  P+  +   D        ++ +C   G P+P V W+
Sbjct: 450 VYECEAYNSEGRDTHQGRISVQAQ-PDWVQVMSDSEVEISSELLWSCLSSGKPRPSVRWL 508

Query: 254 HNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK-EHTHITD 312
            N + +       +   +LKI+ +A  DSG Y C A NK GT   S  L V+ +      
Sbjct: 509 RNGQPVITQDRVEVNGANLKISSLALDDSGMYQCVAENKHGTIYASAELRVQVQAPDFRL 568

Query: 313 QPEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTK 370
            P    + A  G      C   + P  K  + W RG+E +   S  R   + D +L +  
Sbjct: 569 NPVRRLIPAARGGQVMIECRPRAAP--KPILFWSRGTELLANSS--RITVAPDGTLWIRN 624

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAK-KAVVSWNPV 426
            S  D G+YTC A+  L    +   L+V+   +   APSN  + Q  +   +   S +P 
Sbjct: 625 VSRADEGKYTCFAENYLGKANSTGHLSVRDATKITLAPSNADINQGENVTLQCHASHDPT 684

Query: 427 SPQSLRGHFRGYKVQT------WTEKDGEGSIRELIVNKGEST-----TTEVDKFVPASK 475
              +     +G  +        +    G+ +I +L++   + +     T      V ++ 
Sbjct: 685 MDLTFTWALKGVLLDLEDPAGRYFRIQGQENIGDLLIVNAQLSQAGIFTCTAQTVVDSAS 744

Query: 476 NFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
             AR++    A  GPP  I +  VT                  ++  L W      +  +
Sbjct: 745 ASARLVV--RAPPGPPGGILVKMVT-----------------DTSVELWWSHGHDNHSPI 785

Query: 535 MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
             Y I  QS   ++   +    P   +    SA++ GL     YR  +      G G  S
Sbjct: 786 GKYIIMGQSSLSSEWKKMRTE-PANIEGNAESARVIGLMAWMDYRFQVIASNILGKGEPS 844

Query: 595 KYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
           +    +      P   P  + G G   + L+++WT M     N   F Y + +RR  T  
Sbjct: 845 QPSARIRTQPAAPTVAPSGLGGGGGDHHELIVTWTPMAREYQNGDGFGYILAFRRKGTA- 903

Query: 649 AWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELI-VNKGESTTTE 705
           AW++  +     S  V  NQ    + P+E+K +Q +  K G G   + + V+  E   T 
Sbjct: 904 AWSEVRIPHVESSRHVYYNQSLAPYTPFEVK-IQAYNRK-GVGPFSQTVEVHSAEEEPT- 960

Query: 706 VDKFVPASKNFARVLAF 722
                PAS N   + AF
Sbjct: 961 ---VGPASINATALSAF 974


>gi|301784957|ref|XP_002927893.1| PREDICTED: contactin-3-like [Ailuropoda melanoleuca]
          Length = 1027

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 174/631 (27%), Positives = 268/631 (42%), Gaps = 49/631 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P   S++I    +   L I   +  D GSY 
Sbjct: 239 AAKGATVKLECFALGNPVPQINWRRSDGLPF--SNKIKLRKFNGVLEIPDFQQEDTGSYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G   +    L+  A P++    + +  A E+ + +EC+ASG P+P   W+ NG
Sbjct: 297 CIAENSRGRNVARG-RLTYYAKPHWVQLIKDVEIAVEDNLFWECRASGKPKPSYRWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + +       R ++    +TI NL  +D+G + C A N  G VY    + V+A AP+ ++
Sbjct: 356 EALVL---EERIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSK 412

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNW-----IHNQKELTGGRYTILETGDLKITD 276
            P  +      G  V L C+   +PKP  +W     I  + E    R + L+ G LKI +
Sbjct: 413 TPMKKLIQVQVGSMVSLDCKPRASPKPLCSWKKGDVIVQENE----RISFLKDGGLKIAN 468

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
           V  AD G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP 
Sbjct: 469 VTKADVGTYTCIAENQFGKANGTTRLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPL 528

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
           L +   W       DF+ +    +    S+   L +       SG+Y C  QT +D + +
Sbjct: 529 LDIIFTWYFNGALTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSS 588

Query: 393 QATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKD--- 447
            A L V+     P N  + ++ D   A +SW     + +  H     Y VQ  T      
Sbjct: 589 AADLIVRGSPGPPENVKVDEITDT-TAQLSWK----EGIDNHSPVISYSVQARTPFSVGW 643

Query: 448 -GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 644 QTATTVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S  +   GS S   + W  V  E  NG   GY + ++ +  T     ++ +    D 
Sbjct: 702 VPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTN---WIQTVVTSPDT 758

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y + +  Y   G+G  S    +F     P   P  V     + + 
Sbjct: 759 PRYVFRNESIVPFSLYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTIAPSQVSANSLSSSE 818

Query: 618 LVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
           + +SW  +P    N     Y +  R  N GE
Sbjct: 819 IEVSWNTIPWKLSNGHLLGYEV--RYWNNGE 847



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 157/618 (25%), Positives = 239/618 (38%), Gaps = 48/618 (7%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V  AK       ++           P   V+ PE + AA
Sbjct: 181 LYIAKVESSDVGNYTCVVTSTVTNAKVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 240

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P S       RK     + I + ++ DTG+Y C
Sbjct: 241 KGATVKLECFALGNPVPQINWRRSDGLPFSNKI--KLRKFN-GVLEIPDFQQEDTGSYEC 297

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   ++V    L +   P   +  KD        +   CR  G PKP   W+ N
Sbjct: 298 IAENSRG---RNVARGRLTYYAKPHWVQLIKDVEIAVEDNLFWECRASGKPKPSYRWLKN 354

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITD 312
            + L       +E G L I+++   DSG + C A NK G    S  L V         T 
Sbjct: 355 GEALVLEERIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKTP 414

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
             +  +V+ G   +  C   + P    S  W +G   +       F++  D  L +   +
Sbjct: 415 MKKLIQVQVGSMVSLDCKPRASPKPLCS--WKKGDVIVQENERISFLK--DGGLKIANVT 470

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQ 429
           + D G YTC A+ +         L V  P     APSN   + V   +  ++        
Sbjct: 471 KADVGTYTCIAENQFGKANGTTRLVVTEPTRITLAPSN---MDVSVGESVILPCQVQHDP 527

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
            L   F  Y     T+   +GS  E +   G S+   + + +    +   V       + 
Sbjct: 528 LLDIIFTWYFNGALTDFKKDGSHFEKV--GGSSSGDLMIRNIQLKHSGKYVCMVQTGVDS 585

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
             S     V   G PG  ++++   +  +   L W +    +  ++ Y +  Q+     V
Sbjct: 586 VSSAADLIV--RGSPGPPENVKVDEITDTTAQLSWKEGIDNHSPVISYSV--QARTPFSV 641

Query: 550 G-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPF 602
           G      +P + D  T +A +  L P  +Y   +    K G G  S      +    VP 
Sbjct: 642 GWQTATTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
             P  V G G + + LVI+W  +PE   N   F Y + +R       W Q  V       
Sbjct: 702 VPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTN-WIQTVVTSPDTPR 760

Query: 663 LVLANQPT--FQPYEIKV 678
            V  N+    F  YE+KV
Sbjct: 761 YVFRNESIVPFSLYEVKV 778



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 177/734 (24%), Positives = 282/734 (38%), Gaps = 118/734 (16%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  +   +RI   N   +L I ++  +D G + C   N  G   
Sbjct: 339  CRASGKPKPSYRWLKNGEALVLEERIQIEN--GALTISNLNVTDSGMFQCIAENKHGLVY 396

Query: 115  SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
            S S +L V+A AP F+  P  + I       V+ +CK    P+P   W   G  I Q   
Sbjct: 397  S-SAELKVVASAPDFSKTPMKKLIQVQVGSMVSLDCKPRASPKPLCSW-KKGDVIVQE-- 452

Query: 172  NPRRK-VGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
            N R   +    + I N+ K+D G Y C A N  G       + V+     IT AP +   
Sbjct: 453  NERISFLKDGGLKIANVTKADVGTYTCIAENQFGKANGTTRL-VVTEPTRITLAPSNMDV 511

Query: 231  VDGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDV 277
              G++V+L C+V   P  ++   W  N             E  GG      +GDL I ++
Sbjct: 512  SVGESVILPCQVQHDPLLDIIFTWYFNGALTDFKKDGSHFEKVGGS----SSGDLMIRNI 567

Query: 278  AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
                SG+Y C  +  + +   +  L V+        PE+ +V+           ++D + 
Sbjct: 568  QLKHSGKYVCMVQTGVDSVSSAADLIVRGSP---GPPENVKVDE----------ITDTTA 614

Query: 338  KLSIVWLRG----SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ-----TELD 388
            +LS  W  G    S  I +  + R   S  +    T    +D   +T          E +
Sbjct: 615  QLS--WKEGIDNHSPVISYSVQARTPFSVGWQTATTVPEVIDGKTHTATVVELNPWVEYE 672

Query: 389  F--------------IEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
            F              + ++   T +   E P +          + V++W+PV  +   G 
Sbjct: 673  FRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGE 732

Query: 435  -------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
                   FR   V  W +           V + ES        VP S    +V  +N   
Sbjct: 733  GFGYVVAFRPLGVTNWIQTVVTSPDTPRYVFRNES-------IVPFSLYEVKVGVYNNKG 785

Query: 488  NGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKY--- 541
             GP S + +  + E  P    S + A  L SS   + W  +  +  NG L+GY+++Y   
Sbjct: 786  EGPFSPVTTVFSAEEEPTIAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNN 845

Query: 542  ---QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF 598
               +S    KVG              TSA+L GL+ +  Y   +  Y  AG G  S  + 
Sbjct: 846  GEEESSSKVKVGG-----------NETSARLRGLKSNLAYYTAVRAYNSAGAGPFSTTVN 894

Query: 599  YV-----PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQD 653
                   P + P NV    +T   ++++W  +  +E+ +    Y++F+R  +     N  
Sbjct: 895  ATTKKTPPSQPPGNVVWN-ATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQ----NNV 949

Query: 654  DVLDWRQ--SELVLANQPTFQPYEIKVVQTWTEKDGEGS--IR-ELIVNKGESTTTEVDK 708
             VL+  +  +EL+L   P  + Y I+V  T    DG  S  IR   I N     +     
Sbjct: 950  QVLNTNKTSAELLL---PIKEDYIIEVKATTDGGDGTSSEQIRIPRITNMDARGSALAIS 1006

Query: 709  FVPASKNFARVLAF 722
             VPA  ++  V+ F
Sbjct: 1007 SVPAVSSYIPVVLF 1020



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 148/374 (39%), Gaps = 28/374 (7%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS-QGNYGKSLIIKHVEFSDQGSY 102
           V   +KK+ L C   G P P   W  +G  IN S     + N G  ++I      D GSY
Sbjct: 39  VGSEDKKITLNCEARGNPSPHYRWQLNGSDINLSMEYRYKLNGGNLVVINPNRNWDTGSY 98

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEI 157
            C  +N +G   S    L       F T     ++  E + V   C   G P    E   
Sbjct: 99  QCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLC---GPPPHSGELSY 155

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDVYVN 213
            W+ N  P S    + RR V      + I  +  SD GNY C  T+++    V       
Sbjct: 156 AWIFNEYP-SFVEEDSRRFVSQETGHLYIAKVESSDVGNYTCVVTSTVTNAKVLGSPTPL 214

Query: 214 VL-------AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           VL        + P+I  + P+      G TV L C   G P P++NW  +       +  
Sbjct: 215 VLRSDGVMGEYEPKIEVQFPETLPAAKGATVKLECFALGNPVPQINWRRSDGLPFSNKIK 274

Query: 266 ILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
           + +  G L+I D    D+G Y C A N  G     G LT     H     +D E+    +
Sbjct: 275 LRKFNGVLEIPDFQQEDTGSYECIAENSRGRNVARGRLTYYAKPHWVQLIKDVEIAVEDN 334

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             + C A   P  K S  WL+  E +  E     +Q  + +LT++  +  DSG + C A+
Sbjct: 335 LFWECRASGKP--KPSYRWLKNGEALVLEER---IQIENGALTISNLNVTDSGMFQCIAE 389

Query: 385 TELDFIEAQATLTV 398
            +   + + A L V
Sbjct: 390 NKHGLVYSSAELKV 403



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 133/315 (42%), Gaps = 36/315 (11%)

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNG 163
           ++G G+A+S  +    L  P F  EP    F   +E++ +T  C+A G P P   W  NG
Sbjct: 11  AHGNGDAESELL----LQGPVFIREPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNG 66

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             I+ +     +  G N + I   R  DTG+Y C ATNSLG +         A+      
Sbjct: 67  SDINLSMEYRYKLNGGNLVVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKT 126

Query: 224 APKDEYTV-DGKTVVLTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLK 273
             +   +V +G+ VVL C     P P        WI N+     E    R+   ETG L 
Sbjct: 127 KMRSTVSVREGQGVVLLC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLY 182

Query: 274 ITDVAFADSGEYTCFARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAG 322
           I  V  +D G YTC   + +  A+  GS   L ++    + +         PE      G
Sbjct: 183 IAKVESSDVGNYTCVVTSTVTNAKVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKG 242

Query: 323 QSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCR 382
            +    C A+ +P  +++  W R S+ + F ++ +  + N   L +    + D+G Y C 
Sbjct: 243 ATVKLECFALGNPVPQIN--WRR-SDGLPFSNKIKLRKFNGV-LEIPDFQQEDTGSYECI 298

Query: 383 AQTELDFIEAQATLT 397
           A+       A+  LT
Sbjct: 299 AENSRGRNVARGRLT 313


>gi|324502734|gb|ADY41201.1| Neuroglian [Ascaris suum]
          Length = 1047

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 125/365 (34%), Positives = 174/365 (47%), Gaps = 36/365 (9%)

Query: 8   EYKIGNRILLNVIAT----GISASQNRHAPKQQYVTRKKEVALR-NKKVELFCIFGGTPL 62
           EY+ G+ + L V  +    G++  +   +P         EV +R   +++L CIFGG PL
Sbjct: 81  EYRAGDEVQLVVTPSPTDVGVAVHKLWFSPD--------EVNVRAGSRLKLMCIFGGRPL 132

Query: 63  PQTIWSK-DGVPINPSDRIS-----QGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSY 116
           P   WS+ DG    P  R+      + ++GK+LI+ +V   D G Y C   +   +   Y
Sbjct: 133 PSVTWSRIDGEL--PKKRMKDLTSPESDFGKALIVDNVHPDDAGIYECRSQHLFHQMHVY 190

Query: 117 SIDLSVLAAPYFTVEP-EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
                V AAPY+  EP   I+ AEE T    C ASG P P I W  NGKP+ +   N RR
Sbjct: 191 -----VTAAPYWDFEPPSDIDQAEESTAELHCIASGSPTPIIQWYMNGKPLHEVAENERR 245

Query: 176 KV--GPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD 232
            +  G   + I NL    DT  Y CNA+NSLGY++ + +VNV AHAP      +  + V 
Sbjct: 246 LILDGGRILRINNLDHDVDTAVYQCNASNSLGYIFANAFVNVRAHAPRFKMPDRRIWKVV 305

Query: 233 GKTVV-LTCRVFGAPKPEVNWIHNQKE---LTGGRYTILETGDLKITDVAFADSGEYTCF 288
            KT V ++C V  AP+  V W+    +   +  G+  +     L+IT V  AD G Y C 
Sbjct: 306 RKTTVEMSCDVDAAPEAVVRWVDANDQSIAIIPGKIQLFPNHTLRITQVNSADEGLYYCN 365

Query: 289 ARNKLGTAQGSGSLTVKEHTHITD--QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
             NK G  +    L V   TH      P+   VEA +S    C AV+DP L     W   
Sbjct: 366 VSNKYGINRAYNKLEVFNPTHFVRVPSPKKSVVEAHESFNLFCEAVTDPRLNADYTWTHN 425

Query: 347 SEPID 351
             PI+
Sbjct: 426 GVPIN 430



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/316 (23%), Positives = 147/316 (46%), Gaps = 21/316 (6%)

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
           VPLE+PS+F++I+  +     V W  ++  ++RGHFRGY+++ W  +D +  + E ++ +
Sbjct: 680 VPLESPSSFSVIEFFNCTSVAVGWRHINRDTVRGHFRGYQIEYW--EDEKPFVVEKVLIE 737

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
            +     +    P +   AR+   N  Y      +ISF TPEG+P  V  L    +G++ 
Sbjct: 738 SDRNEAVLTDLRPITNYTARIHTVNAHYRSESESLISFSTPEGIPSKVHDLRVRAVGATT 797

Query: 520 FYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP---LLERLPYISDPTTTSAKLAGLEPST 576
             + W  P QPNG + GY + +++     V     L  +L Y+ +          +EP T
Sbjct: 798 LLITWQPPRQPNGNIRGYFLTFENSTSGHVEETYVLNRQLHYLHEE---------VEPDT 848

Query: 577 KYRIHLAGYTKAGDGAE-SKYLFYVPFKNPDN--VEGRGSTPNNLVISWTAMPEIEHNAP 633
            Y++ +   T  G+G +  + +   P +NPD    +   ++P    + W      E   P
Sbjct: 849 GYKVSVWAETNGGEGPKVVRAIRTWPLRNPDTPIFKVTPTSPWTAQVQWIPSNGSEWAMP 908

Query: 634 HFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRE 693
              + + +    + + W + +++   ++ ++L N    +  + ++V    E   + + +E
Sbjct: 909 GSSFFVNYSVSGS-DIWTESEMISLPRTHILLNN--LLEDTQYRIVGVSKEGSRQNASKE 965

Query: 694 LIVNK-GESTTTEVDK 708
           +I+     ST T + +
Sbjct: 966 IIIRSLSRSTMTHLSR 981



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 48/89 (53%)

Query: 590 DGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEA 649
           DGA  +     P+ NP NV   G+ PNNLVI W  M + E NAP   Y + +R +  G  
Sbjct: 568 DGAICRTKESFPYGNPSNVTAEGNEPNNLVIRWIPMDKYEWNAPDLHYIVRYRLNQQGAQ 627

Query: 650 WNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           W +  + D   +  V+ +QPTF+ Y ++V
Sbjct: 628 WKETHIEDPLANHTVIRDQPTFKEYIVQV 656


>gi|324499966|gb|ADY39998.1| Neuroglian [Ascaris suum]
          Length = 1341

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 127/408 (31%), Positives = 191/408 (46%), Gaps = 24/408 (5%)

Query: 8   EYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIW 67
           +YK G++  L+V      +  +   P +QYV +   VAL+    +L C F G P P+  W
Sbjct: 237 DYKFGSQFRLDVTTNRRRSLSSPIPPTEQYVNQSSPVALQGTIHKLHCFFSGFPEPKPEW 296

Query: 68  SKDGVPINPSD-RISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAP 126
             +GV I   D R +   YGK+L+  +V F   G Y C   N +   + +  D+ V AAP
Sbjct: 297 KHNGVAIAEDDNRFTFEAYGKTLVF-NVSFETAGQYQCIFPNHLDLDRKF--DVVVEAAP 353

Query: 127 YF-TVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           Y+ +  P     +E ETV F+C ASG P P I +  NG  +S+     R  +  + +T+ 
Sbjct: 354 YWPSGPPPNTQTSEGETVKFDCSASGKPTPTITFYKNGVEMSKQKDGDRWVIDGSVLTLY 413

Query: 186 NLRKSDTGN-----YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC 240
           +++K   GN     Y C A N  GY++ + Y+N+LA  P++     +   V G  V L C
Sbjct: 414 DVKKGLHGNGDNAVYQCKAENKHGYIWANFYLNLLAFKPQLVNDSGNVEAVIGSKVTLFC 473

Query: 241 RVFGAPKPEVNWIHNQKELTGGRYTILET-----GDLKITDVAFADSGEYTCFARNKLGT 295
           R F +P  ++ W      L G  + I+       G L I  V     GEY C  +NK  T
Sbjct: 474 RFFASPIADITW--ESSVLPGITHNIIPADAQGEGKLVINSVGRDAEGEYRCIGKNKYDT 531

Query: 296 AQGSGSLTVKEHTHITDQPEDYE-VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID--- 351
           A GS  L V++ T +       E V AG      C A  D +L+++  WL  ++P+    
Sbjct: 532 ATGSTKLVVRDATRLEPFESGLEKVLAGHHIELPCEAQHDENLQVTYEWLVDAKPLSQQH 591

Query: 352 -FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
                 R    N  SL ++  S  D+  YTC A+T LD +E    + V
Sbjct: 592 LMSGHYRLTDKN--SLVISNPSRYDAANYTCVARTALDSVEKSIEIHV 637



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 143/350 (40%), Gaps = 71/350 (20%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE----------- 449
            P   P+ F L+   D+  A   W+P+  Q ++G+F G K+ TW + + E           
Sbjct: 862  PNYTPTGFKLVSS-DSSSATFVWDPIDRQQVQGNFTGIKITTWADDEEEIEEGSASRLKR 920

Query: 450  ------------------GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                               S R+  +   +  +  V    P + N+A++   NG  +G P
Sbjct: 921  SLRVVRTKRDDVALHGAASSDRQTTIISPDKHSATVFNLRPNAVNYAQISVMNGQNDGAP 980

Query: 492  SEIISFVTPEGVPGTVQSLEAIPLGS------SAFYLKWVKPEQPNGVLMGYKIKYQSVK 545
            S  ISF   EGVP  V++LEA+P+ +      +   ++W KP   NG L+GY ++   V 
Sbjct: 981  SAPISFRLKEGVPTPVRNLEALPMNNKHENERAVVIVRWKKPFHMNGKLVGYTVESCLVS 1040

Query: 546  GTKVGPLLERLP-YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFK 603
             +      E  P  ++ P   S ++  LE  +KYR  + G T AG G   S+ +  +P  
Sbjct: 1041 PSGQMAQRESCPRRVTGPEERSVRITNLENRSKYRFIVYGSTAAGKGDPNSRDVITLPEY 1100

Query: 604  NPDNVE---------GRGSTPNNLVISWTAMPEIEH----NAPHFKYRIFWRRHNTGEAW 650
                +E         G G+   N+ I+     E +     NA + KY+            
Sbjct: 1101 YRPKLEPVQPLLEETGVGNDHVNITITPGQYEESDERPVGNAMYVKYK------------ 1148

Query: 651  NQDDVLDWRQSE-------LVLANQPTFQPYEIKVVQTWTEKDGEGSIRE 693
             + D  DW  ++       + + N      Y++ VV    +KD  G +RE
Sbjct: 1149 -KSDSDDWEMAQPQGDNLTVHIGNLEPGTKYDVAVVAVALQKDPTGEVRE 1197



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 86/381 (22%), Positives = 140/381 (36%), Gaps = 33/381 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINP---SDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           K+  L C   G P P   W K+G P N    S+R++Q     S +   +  +D+G Y CE
Sbjct: 69  KERTLRCKAEGNPAPVYKWKKNGKPFNLNMYSNRVAQVPGEGSFVFSKLTVADEGVYQCE 128

Query: 106 VSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECK-ASGLPEPEIHWVHNG 163
            +N  G A S  I L      YF   EPE +     +     C      P   ++W+  G
Sbjct: 129 ATNDNGTAVSEKITLQQTWIRYFPQAEPEVVRVELGDAYQRNCTPPESNPAARVYWIFKG 188

Query: 164 KPISQAPPNPRRKVGPNR---ITIENLRKSD---TGNYGCNATNSLGYVYK-------DV 210
                        +  N    I   +++ +D      Y C A N+    YK       DV
Sbjct: 189 DEEGSFDSINSSHISTNELGTIFFHHVKDTDFKPNRYYTCTAENTKLKDYKFGSQFRLDV 248

Query: 211 YVNVLAHAPEITEAPKDEY-------TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT--G 261
             N           P ++Y        + G    L C   G P+P+  W HN   +    
Sbjct: 249 TTNRRRSLSSPI-PPTEQYVNQSSPVALQGTIHKLHCFFSGFPEPKPEWKHNGVAIAEDD 307

Query: 262 GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA 321
            R+T    G   + +V+F  +G+Y C   N L   +    +        +  P + +   
Sbjct: 308 NRFTFEAYGKTLVFNVSFETAGQYQCIFPNHLDLDRKFDVVVEAAPYWPSGPPPNTQTSE 367

Query: 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSND----YSLTVTKSSELDSG 377
           G++  F C+A   P+  ++  +  G E    +   R+V        Y +        D+ 
Sbjct: 368 GETVKFDCSASGKPTPTITF-YKNGVEMSKQKDGDRWVIDGSVLTLYDVKKGLHGNGDNA 426

Query: 378 QYTCRAQTELDFIEAQATLTV 398
            Y C+A+ +  +I A   L +
Sbjct: 427 VYQCKAENKHGYIWANFYLNL 447



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 8/115 (6%)

Query: 572 LEPSTKYRIHLAGYTKAGDGA------ESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAM 625
           + P   Y   + G    GDGA      E K    VP KNP+ V   GS P NL++ W  M
Sbjct: 723 MRPFGNYHFRVFGRNDFGDGAPTNVKGECKTPARVPDKNPEGVSAVGSRPENLIVFWKPM 782

Query: 626 PEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLD--WRQSELVLANQPTFQPYEIKV 678
           P  + N   F Y I +R   +   W ++ V D    +  + L+ +  F+PYE++V
Sbjct: 783 PREDWNGRDFHYIIRYRPSGSNGEWKEEKVDDPYSDRHTIELSAEEPFRPYEVQV 837



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 75/328 (22%), Positives = 124/328 (37%), Gaps = 49/328 (14%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVE-----FSDQGS 101
           V+  C   G P P   + K+GV ++   +   G+     G  L +  V+       D   
Sbjct: 371 VKFDCSASGKPTPTITFYKNGVEMS---KQKDGDRWVIDGSVLTLYDVKKGLHGNGDNAV 427

Query: 102 YTCEVSNGVGEAKSYSIDLSVLA-APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV 160
           Y C+  N  G   + +  L++LA  P    +   + A     VT  C+    P  +I W 
Sbjct: 428 YQCKAENKHGYIWA-NFYLNLLAFKPQLVNDSGNVEAVIGSKVTLFCRFFASPIADITWE 486

Query: 161 HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC-------NATNSLGYVYKDVYVN 213
            +  P       P    G  ++ I ++ +   G Y C        AT S   V +D    
Sbjct: 487 SSVLPGITHNIIPADAQGEGKLVINSVGRDAEGEYRCIGKNKYDTATGSTKLVVRD---- 542

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVN--WIHN-----QKELTGGRYTI 266
             A   E  E+   E  + G  + L C        +V   W+ +     Q+ L  G Y +
Sbjct: 543 --ATRLEPFESGL-EKVLAGHHIELPCEAQHDENLQVTYEWLVDAKPLSQQHLMSGHYRL 599

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            +   L I++ +  D+  YTC AR  L + + S  +      H+ D P    + A   A 
Sbjct: 600 TDKNSLVISNPSRYDAANYTCVARTALDSVEKSIEI------HVDDVPN--PIHAAYIA- 650

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFES 354
            +C    DP+ +++ +     E  DF S
Sbjct: 651 -KC----DPTAQVTSIKFEYMENADFSS 673


>gi|441665503|ref|XP_004091815.1| PREDICTED: contactin-4 [Nomascus leucogenys]
          Length = 807

 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 190/723 (26%), Positives = 296/723 (40%), Gaps = 104/723 (14%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P  IW + DG PI    R  + N    L I + +  D G Y C   N 
Sbjct: 24  VKLECFALGNPVPTIIWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGLYECVAENS 81

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P +  +   I+ A EE V +ECKA+G P+P   W+ NG+ + Q 
Sbjct: 82  RGKNVARG-QLTFYAQPNWIQKINDIHVAMEENVFWECKANGRPKPTYRWLKNGEHL-QT 139

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
               + + G   IT+ NL  SD G Y C A N  G ++ +  ++V+A  P+ +       
Sbjct: 140 RDRIQIEQGTLNITMVNL--SDAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRV 197

Query: 230 TVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADSGEYT 286
           T+   G  VV+ C+   +PKP   W   +  L    R TI E G+L+I +V  +D+G YT
Sbjct: 198 TLVKVGGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYT 257

Query: 287 CFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           C A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   W   
Sbjct: 258 CVATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFN 317

Query: 347 SEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
              IDF+ +         Q +   L +       +G+Y C  QT +D + A A L V+ P
Sbjct: 318 GHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGP 377

Query: 402 LEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGEGSIR 453
              P   T+ ++ D   A +SW P     SP ++      Y +Q  T          ++ 
Sbjct: 378 PGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFSVGWQAVSTVP 430

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTPEGVP 504
           ELI   G++ T  V    P  +   R +A N    G PS         E +  VTP  V 
Sbjct: 431 ELI--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVS 488

Query: 505 GTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI--S 560
           G   S        S   + W  V  E  NG   GY + ++       G ++  L  +  +
Sbjct: 489 GGGGS-------KSELVITWETVPEELQNGRGFGYVVAFRP-----YGKMIWMLTVLASA 536

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTP 615
           D +    +   + P + + + +  +   G+G  S           P K P ++  R  + 
Sbjct: 537 DASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSA 596

Query: 616 NNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYE 675
            ++ + W +  E                                       N+   Q YE
Sbjct: 597 TDIEVFWASPLE--------------------------------------KNRGRIQGYE 618

Query: 676 IKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS 735
           +K    W  +D E + R+ I   G  T+T++     ++     V A+N A  GP S I++
Sbjct: 619 VKY---WRHEDKEENARK-IRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPSSAIVN 674

Query: 736 FVT 738
             T
Sbjct: 675 VTT 677



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 145/584 (24%), Positives = 218/584 (37%), Gaps = 75/584 (12%)

Query: 132 PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKS 190
           PE +  A+  TV  EC A G P P I W   +GKPI++     RR      + I N ++ 
Sbjct: 13  PETVPTAKGATVKLECFALGNPVPTIIWRRADGKPIAR---KARRHKSNGILEIPNFQQE 69

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A NS G       +   A  P   +   D +    + V   C+  G PKP  
Sbjct: 70  DAGLYECVAENSRGKNVARGQLTFYAQ-PNWIQKINDIHVAMEENVFWECKANGRPKPTY 128

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N + L       +E G L IT V  +D+G Y C A NK G    +  L+V     I
Sbjct: 129 RWLKNGEHLQTRDRIQIEQGTLNITMVNLSDAGMYQCLAENKHGVIFSNAELSV-----I 183

Query: 311 TDQPEDYE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
              P+           V+ G      C   + P  K    W +G + I  E+E R   S 
Sbjct: 184 AVGPDFSRTLLKRVTLVKVGGEVVIECKPKASP--KPVYTWKKGRD-ILKENE-RITISE 239

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVS 422
           D +L +   ++ D+G YTC A        +   L V+ P       + + V   +  V+ 
Sbjct: 240 DGNLRIINVTKSDAGSYTCVATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLP 299

Query: 423 WNPVSPQSL----RGHFRGYKVQTWTEKD------GEGSIRELIVNKGE---------ST 463
                  SL       F G+ +    + D      G+ S  +L++   +           
Sbjct: 300 CQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMV 359

Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYL 522
            T VD+   A+    R         GPP    +    E    T Q S    P   S   +
Sbjct: 360 QTSVDRLSAAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITM 410

Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
             ++   P      + + +Q+V           +P + D  T +A + GL P  +Y    
Sbjct: 411 YVIQARTP------FSVGWQAVS---------TVPELIDGKTFTATVVGLNPWVEYEFRT 455

Query: 583 AGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
                 G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F 
Sbjct: 456 VAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFG 515

Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
           Y + +R +     W    +     S  V  N+    F P+E+KV
Sbjct: 516 YVVAFRPYGK-MIWMLTVLASADASRYVFRNESVRPFSPFEVKV 558



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 21/192 (10%)

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
           RG  +GY+V+ W  +D E + R+ I   G  T+T++     ++     V A+N A  GP 
Sbjct: 611 RGRIQGYEVKYWRHEDKEENARK-IRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPS 669

Query: 492 SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
           S I++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 670 SAIVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNR 725

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
            +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P  + 
Sbjct: 726 QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIPKISN 775

Query: 606 DNVEGRGSTPNN 617
               G G++ +N
Sbjct: 776 AYARGSGASTSN 787


>gi|332231553|ref|XP_003264959.1| PREDICTED: contactin-4 isoform 2 [Nomascus leucogenys]
          Length = 1026

 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 190/723 (26%), Positives = 296/723 (40%), Gaps = 104/723 (14%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P  IW + DG PI    R  + N    L I + +  D G Y C   N 
Sbjct: 243 VKLECFALGNPVPTIIWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGLYECVAENS 300

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P +  +   I+ A EE V +ECKA+G P+P   W+ NG+ + Q 
Sbjct: 301 RGKNVARG-QLTFYAQPNWIQKINDIHVAMEENVFWECKANGRPKPTYRWLKNGEHL-QT 358

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
               + + G   IT+ NL  SD G Y C A N  G ++ +  ++V+A  P+ +       
Sbjct: 359 RDRIQIEQGTLNITMVNL--SDAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRV 416

Query: 230 TVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADSGEYT 286
           T+   G  VV+ C+   +PKP   W   +  L    R TI E G+L+I +V  +D+G YT
Sbjct: 417 TLVKVGGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYT 476

Query: 287 CFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           C A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   W   
Sbjct: 477 CVATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFN 536

Query: 347 SEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
              IDF+ +         Q +   L +       +G+Y C  QT +D + A A L V+ P
Sbjct: 537 GHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGP 596

Query: 402 LEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGEGSIR 453
              P   T+ ++ D   A +SW P     SP ++      Y +Q  T          ++ 
Sbjct: 597 PGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFSVGWQAVSTVP 649

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTPEGVP 504
           ELI   G++ T  V    P  +   R +A N    G PS         E +  VTP  V 
Sbjct: 650 ELI--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVS 707

Query: 505 GTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI--S 560
           G   S        S   + W  V  E  NG   GY + ++       G ++  L  +  +
Sbjct: 708 GGGGS-------KSELVITWETVPEELQNGRGFGYVVAFRP-----YGKMIWMLTVLASA 755

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTP 615
           D +    +   + P + + + +  +   G+G  S           P K P ++  R  + 
Sbjct: 756 DASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSA 815

Query: 616 NNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYE 675
            ++ + W +  E                                       N+   Q YE
Sbjct: 816 TDIEVFWASPLE--------------------------------------KNRGRIQGYE 837

Query: 676 IKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS 735
           +K    W  +D E + R+ I   G  T+T++     ++     V A+N A  GP S I++
Sbjct: 838 VKY---WRHEDKEENARK-IRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPSSAIVN 893

Query: 736 FVT 738
             T
Sbjct: 894 VTT 896



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 161/638 (25%), Positives = 240/638 (37%), Gaps = 85/638 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V+ PE +  
Sbjct: 178 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPT 237

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   +GKPI++     RR      + I N ++ D G Y 
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIAR---KARRHKSNGILEIPNFQQEDAGLYE 294

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P   +   D +    + V   C+  G PKP   W+ N 
Sbjct: 295 CVAENSRGKNVARGQLTFYAQ-PNWIQKINDIHVAMEENVFWECKANGRPKPTYRWLKNG 353

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           + L       +E G L IT V  +D+G Y C A NK G    +  L+V     I   P+ 
Sbjct: 354 EHLQTRDRIQIEQGTLNITMVNLSDAGMYQCLAENKHGVIFSNAELSV-----IAVGPDF 408

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  K    W +G + I  E+E R   S D +L +
Sbjct: 409 SRTLLKRVTLVKVGGEVVIECKPKASP--KPVYTWKKGRD-ILKENE-RITISEDGNLRI 464

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
              ++ D+G YTC A        +   L V+ P       + + V   +  V+       
Sbjct: 465 INVTKSDAGSYTCVATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHD 524

Query: 429 QSL----RGHFRGYKVQTWTEKD------GEGSIRELIVNKGE---------STTTEVDK 469
            SL       F G+ +    + D      G+ S  +L++   +            T VD+
Sbjct: 525 HSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDR 584

Query: 470 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPE 528
              A+    R         GPP    +    E    T Q S    P   S   +  ++  
Sbjct: 585 LSAAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQAR 635

Query: 529 QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
            P      + + +Q+V           +P + D  T +A + GL P  +Y          
Sbjct: 636 TP------FSVGWQAV---------STVPELIDGKTFTATVVGLNPWVEYEFRTVAANVI 680

Query: 589 GDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F Y + +R
Sbjct: 681 GIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFR 740

Query: 643 RHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
            +     W    +     S  V  N+    F P+E+KV
Sbjct: 741 PYGK-MIWMLTVLASADASRYVFRNESVRPFSPFEVKV 777



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 142/369 (38%), Gaps = 30/369 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  ++            SL+I +  +  D G+Y C  +
Sbjct: 44  KKVKLNCEVKGNPKPHIRWKLNGTDVDTGMDFRYSVVEGSLLINNPNKTQDAGTYQCTAT 103

Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVHN 162
           N  G   S    L       F T     ++    + +   C   G P    E    W+ N
Sbjct: 104 NSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMVLLC---GPPPHSGELSYAWIFN 160

Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN- 213
             P  Q   + RR V      + I  + KSD GNY C  TN+      LG     +  N 
Sbjct: 161 EYPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRND 217

Query: 214 --VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILET 269
             +  + P+I  + P+   T  G TV L C   G P P + W   + K +          
Sbjct: 218 GVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHKSN 277

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I +    D+G Y C A N  G     G LT     +   +  D  V   ++  + C
Sbjct: 278 GILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAMEENVFWEC 337

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   P  K +  WL+  E +        +Q    +L +T  +  D+G Y C A+ +   
Sbjct: 338 KANGRP--KPTYRWLKNGEHLQTRDR---IQIEQGTLNITMVNLSDAGMYQCLAENKHGV 392

Query: 390 IEAQATLTV 398
           I + A L+V
Sbjct: 393 IFSNAELSV 401



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 117/303 (38%), Gaps = 34/303 (11%)

Query: 119 DLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D S L  P F  EP    F   +EE+ V   C+  G P+P I W  NG  +     + R 
Sbjct: 19  DDSTLHGPIFIQEPSPVMFPLDSEEKKVKLNCEVKGNPKPHIRWKLNGTDVDTG-MDFRY 77

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            V    + I N  K+ D G Y C ATNS G +         A+        +   +V  G
Sbjct: 78  SVVEGSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRG 137

Query: 234 KTVVLTCRVFGAPKPEVN-----WIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYT 286
           + +VL C     P P        WI N+        R+   ETG+L I  V  +D G YT
Sbjct: 138 QGMVLLC----GPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYT 193

Query: 287 CFARNK------LG-----TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           C   N       LG       +  G +   E       PE      G +    C A+ +P
Sbjct: 194 CVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNP 253

Query: 336 SLKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
               +I+W R   +PI    + R  +SN   L +    + D+G Y C A+       A+ 
Sbjct: 254 V--PTIIWRRADGKPI--ARKARRHKSNGI-LEIPNFQQEDAGLYECVAENSRGKNVARG 308

Query: 395 TLT 397
            LT
Sbjct: 309 QLT 311



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 21/192 (10%)

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            RG  +GY+V+ W  +D E + R+ I   G  T+T++     ++     V A+N A  GP 
Sbjct: 830  RGRIQGYEVKYWRHEDKEENARK-IRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPS 888

Query: 492  SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
            S I++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 889  SAIVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNR 944

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
             +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P  + 
Sbjct: 945  QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIPKISN 994

Query: 606  DNVEGRGSTPNN 617
                G G++ +N
Sbjct: 995  AYARGSGASTSN 1006


>gi|410910446|ref|XP_003968701.1| PREDICTED: contactin-5-like [Takifugu rubripes]
          Length = 1055

 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 156/619 (25%), Positives = 255/619 (41%), Gaps = 67/619 (10%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGS 101
           +A R   V L C   G P+P   W K    +P     R SQ      L I +++  D G+
Sbjct: 270 LAARGATVRLECFALGNPVPTITWRKINGNIPKKARLRKSQA----VLEIPNIQLEDSGT 325

Query: 102 YTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVH 161
           Y C+  N  G   ++   L V   P +            E + +ECKA+G P P   W+ 
Sbjct: 326 YECKAENPRG-GTAFKGHLQVYTLPQWVRMINDTQMDSGEKLRWECKATGRPRPTYRWLR 384

Query: 162 NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           NG P++        ++    +TI  ++++D+G Y C   N  G +Y +  + +LA AP  
Sbjct: 385 NGLPLTS---QSGVEILNGELTIHKVQQTDSGMYQCVGENKYGAIYSNAELKILASAPVF 441

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
            + P       GK V L C+   +PKP + W    + +    R  +L    L+I + +  
Sbjct: 442 VDNPVWVIATLGKDVSLDCKPRASPKPRILWKRGDRRIQPNKRIMLLRNNTLRIVNSSRT 501

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D G Y C A N+ G+A+ +  L VK+   +   P   EV  G+S    C A  D SL ++
Sbjct: 502 DEGSYVCRADNQFGSAEMTAVLWVKDAMRVELSPHRVEVTVGESVVLSCKATHDTSLDVT 561

Query: 341 IVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
             W     PI F+ +         QS+   L +       +G+Y CRAQT  D + A+A 
Sbjct: 562 FQWFFNQRPITFQQDGGHFEYIQTQSSTVDLMIRNILLRHAGRYGCRAQTSADTVTAEAE 621

Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHFRGYKVQTWTEKDG 448
           L V+ P   P    +++ I    A +SW       +P+S  +L+     + +   T K  
Sbjct: 622 LLVRGP-PGPPGVVIVEEITDATATLSWTRGLDNHSPISTYNLQAR-SPFSLGWQTVKTD 679

Query: 449 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGT-V 507
              +       G+  +    +  P  +   RV+A N    G PS          VP   V
Sbjct: 680 PDPV------TGDLESAMAVQLNPWVEYEFRVVATNAIGTGDPS----------VPSRGV 723

Query: 508 QSLEAIPLGSSA-----------FYLKW--VKPEQPNGVLMGYKIKYQS--VKGTKVGPL 552
           ++ EA+P  + A             + W  V  E  NG   GY + +++   +G K    
Sbjct: 724 RTKEAVPSVAPANVSGGNGRRHELVILWEPVSEEFQNGEGFGYIVAFRANGTRGWK---- 779

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDN 607
            E++   +D T    +     P T + + +  Y   GDG  SK +        P + P +
Sbjct: 780 -EKMVTSADSTMYKYRDETFPPLTPFEVKVGVYNNKGDGPFSKVVIIHSAEGEPKEAPSD 838

Query: 608 VEGRGSTPNNLVISWTAMP 626
           V+    + + + ++W   P
Sbjct: 839 VKAYSISSSEIRLTWKPSP 857



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 164/662 (24%), Positives = 242/662 (36%), Gaps = 69/662 (10%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA---------PYFTVE-PEFINA 137
           +L I  V+ SD GSY C V N V  A+  S    +            P   V  P  + A
Sbjct: 212 NLYISKVQPSDVGSYICLVKNTVTNARVLSPPTPLTLKTDGIMGEYEPKIEVHFPPSVLA 271

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   TV  EC A G P P I W   NG      P   R +     + I N++  D+G Y 
Sbjct: 272 ARGATVRLECFALGNPVPTITWRKING----NIPKKARLRKSQAVLEIPNIQLEDSGTYE 327

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A N  G      ++ V    P+      D     G+ +   C+  G P+P   W+ N 
Sbjct: 328 CKAENPRGGTAFKGHLQVYT-LPQWVRMINDTQMDSGEKLRWECKATGRPRPTYRWLRNG 386

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI-TDQPE 315
             LT      +  G+L I  V   DSG Y C   NK G    +  L +     +  D P 
Sbjct: 387 LPLTSQSGVEILNGELTIHKVQQTDSGMYQCVGENKYGAIYSNAELKILASAPVFVDNPV 446

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
                 G+  +  C   + P  K  I+W RG   I        +++N  +L +  SS  D
Sbjct: 447 WVIATLGKDVSLDCKPRASP--KPRILWKRGDRRIQPNKRIMLLRNN--TLRIVNSSRTD 502

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
            G Y CRA  +    E  A L V+  +    +   ++V   +  V+S       SL   F
Sbjct: 503 EGSYVCRADNQFGSAEMTAVLWVKDAMRVELSPHRVEVTVGESVVLSCKATHDTSLDVTF 562

Query: 436 RGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
           + +  Q       +G   E I    ++ ++ VD  +   +N   +L   G Y        
Sbjct: 563 QWFFNQRPITFQQDGGHFEYI----QTQSSTVDLMI---RNI--LLRHAGRYGCRAQTSA 613

Query: 496 SFVT---------PEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSV-- 544
             VT         P G PG V   E   +  +   L W +    +  +  Y ++ +S   
Sbjct: 614 DTVTAEAELLVRGPPGPPGVVIVEE---ITDATATLSWTRGLDNHSPISTYNLQARSPFS 670

Query: 545 ---KGTKVGPLLERLPYISDPTT---TSAKLAGLEPSTKYRIHLAGYTKAGDGAES---- 594
              +  K  P         DP T    SA    L P  +Y   +      G G  S    
Sbjct: 671 LGWQTVKTDP---------DPVTGDLESAMAVQLNPWVEYEFRVVATNAIGTGDPSVPSR 721

Query: 595 --KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
             +    VP   P NV G     + LVI W  + E   N   F Y + +R + T   W +
Sbjct: 722 GVRTKEAVPSVAPANVSGGNGRRHELVILWEPVSEEFQNGEGFGYIVAFRANGT-RGWKE 780

Query: 653 DDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFV 710
             V     +     ++  P   P+E+KV     + DG  S + +I++  E    E    V
Sbjct: 781 KMVTSADSTMYKYRDETFPPLTPFEVKVGVYNNKGDGPFS-KVVIIHSAEGEPKEAPSDV 839

Query: 711 PA 712
            A
Sbjct: 840 KA 841



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 164/649 (25%), Positives = 268/649 (41%), Gaps = 79/649 (12%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           +K+   C   G P P   W ++G+P+     +   N    L I  V+ +D G Y C   N
Sbjct: 364 EKLRWECKATGRPRPTYRWLRNGLPLTSQSGVEILN--GELTIHKVQQTDSGMYQCVGEN 421

Query: 109 GVGEAKSYSIDLSVLA-APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPIS 167
             G   S + +L +LA AP F   P ++ A   + V+ +CK    P+P I W    + I 
Sbjct: 422 KYGAIYS-NAELKILASAPVFVDNPVWVIATLGKDVSLDCKPRASPKPRILWKRGDRRIQ 480

Query: 168 QAPPNPR-RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
              PN R   +  N + I N  ++D G+Y C A N  G       + V   A  +  +P 
Sbjct: 481 ---PNKRIMLLRNNTLRIVNSSRTDEGSYVCRADNQFGSAEMTAVLWV-KDAMRVELSPH 536

Query: 227 DEYTVDGKTVVLTCRVFGAPKPEV--NWIHNQKELT----GGRYTILETG----DLKITD 276
                 G++VVL+C+       +V   W  NQ+ +T    GG +  ++T     DL I +
Sbjct: 537 RVEVTVGESVVLSCKATHDTSLDVTFQWFFNQRPITFQQDGGHFEYIQTQSSTVDLMIRN 596

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEH---------THITDQPEDYEVEAGQS--- 324
           +    +G Y C A+    T      L V+             ITD         G     
Sbjct: 597 ILLRHAGRYGCRAQTSADTVTAEAELLVRGPPGPPGVVIVEEITDATATLSWTRGLDNHS 656

Query: 325 --ATFRCNAVSDPSLKLSIVWLRGSEPI--DFESEPRFVQSN---DYSLTVTKSSELDSG 377
             +T+   A S  SL    V     +P+  D ES    VQ N   +Y   V  ++ + +G
Sbjct: 657 PISTYNLQARSPFSLGWQTV-KTDPDPVTGDLESA-MAVQLNPWVEYEFRVVATNAIGTG 714

Query: 378 QYTCRAQTELDFIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR 436
             +         + ++   T + VP  AP+N +        + V+ W PVS +   G   
Sbjct: 715 DPS---------VPSRGVRTKEAVPSVAPANVSGGNG-RRHELVILWEPVSEEFQNGEGF 764

Query: 437 GYKVQTWTEKDGEGSIRELIVNKGESTTTEV--DKFVPASKNFARVLAFNGAYNGPPSEI 494
           GY V      +G    +E +V   +ST  +   + F P +    +V  +N   +GP S++
Sbjct: 765 GYIVAF--RANGTRGWKEKMVTSADSTMYKYRDETFPPLTPFEVKVGVYNNKGDGPFSKV 822

Query: 495 ISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY-QSVKGTKVGPL 552
           +   + EG P    S ++A  + SS   L W KP    G   GY++ Y + ++  + G  
Sbjct: 823 VIIHSAEGEPKEAPSDVKAYSISSSEIRLTW-KPSPGPGKPKGYEVCYWKEMEQQEAG-- 879

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-----KYLFYVPFKNPDN 607
            ++   + + TT    L GLE +T+Y+  + G+   G G  S     K     P + P N
Sbjct: 880 -KKQRTVKNETTII--LTGLEGNTRYQFTVNGFNSVGQGPASAAVSAKTRRSPPAQPPSN 936

Query: 608 V----EGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
           +    EG     NN+ +SW  +   E+ +    Y +  ++   G  +NQ
Sbjct: 937 LMWIQEG-----NNVSLSWEPVKAKENESDVIGYMVLLKQE--GRGYNQ 978



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 136/371 (36%), Gaps = 33/371 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEF-SDQGSYTCEVS 107
           KKV + C   G P P   W  +   I+            SLII +    SD G Y C+  
Sbjct: 76  KKVVMHCEARGNPAPTYSWHLNQTEIDSEADFRYSVVEGSLIINNASMASDYGMYQCKAE 135

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N  G   S    L       F+ +    ++  E + V   C      PE    WV N  P
Sbjct: 136 NSFGTILSRDALLRFAYLNDFSRKARGDVSVREGQGVVLMCTPPPHSPEIIYSWVFNEFP 195

Query: 166 ISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA------- 216
            S    + RR +  +   + I  ++ SD G+Y C   N++          VL+       
Sbjct: 196 -SFVAEDSRRFISQHTGNLYISKVQPSDVGSYICLVKNTV------TNARVLSPPTPLTL 248

Query: 217 --------HAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
                   + P+I    P       G TV L C   G P P + W      +        
Sbjct: 249 KTDGIMGEYEPKIEVHFPPSVLAARGATVRLECFALGNPVPTITWRKINGNIPKKARLRK 308

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               L+I ++   DSG Y C A N  G     G L V           D ++++G+   +
Sbjct: 309 SQAVLEIPNIQLEDSGTYECKAENPRGGTAFKGHLQVYTLPQWVRMINDTQMDSGEKLRW 368

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  + +  WLR   P+  +S    V+  +  LT+ K  + DSG Y C  + + 
Sbjct: 369 ECKATGRP--RPTYRWLRNGLPLTSQSG---VEILNGELTIHKVQQTDSGMYQCVGENKY 423

Query: 388 DFIEAQATLTV 398
             I + A L +
Sbjct: 424 GAIYSNAELKI 434



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 120/285 (42%), Gaps = 35/285 (12%)

Query: 125 APYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P+FT EP+   F   ++E+ V   C+A G P P   W  N   I  +  + R  V    
Sbjct: 57  GPFFTHEPDDIIFPLDSDEKKVVMHCEARGNPAPTYSWHLNQTEI-DSEADFRYSVVEGS 115

Query: 182 ITIENL-RKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLT 239
           + I N    SD G Y C A NS G +     +   A+  + +   + + +V +G+ VVL 
Sbjct: 116 LIINNASMASDYGMYQCKAENSFGTILSRDALLRFAYLNDFSRKARGDVSVREGQGVVLM 175

Query: 240 CRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFAR 290
           C     P P       +W+ N+          R+    TG+L I+ V  +D G Y C  +
Sbjct: 176 C----TPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQHTGNLYISKVQPSDVGSYICLVK 231

Query: 291 NKLGTAQGSG---SLTVKEHTHITDQPEDYEVE------AGQSATFR--CNAVSDPSLKL 339
           N +  A+       LT+K    + +     EV       A + AT R  C A+ +P    
Sbjct: 232 NTVTNARVLSPPTPLTLKTDGIMGEYEPKIEVHFPPSVLAARGATVRLECFALGNPV--P 289

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           +I W + +  I  ++  R  Q+    L +      DSG Y C+A+
Sbjct: 290 TITWRKINGNIPKKARLRKSQA---VLEIPNIQLEDSGTYECKAE 331


>gi|225000048|gb|AAI72275.1| SDK2 protein [synthetic construct]
 gi|225000918|gb|AAI72562.1| SDK2 protein [synthetic construct]
          Length = 1851

 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 141/500 (28%), Positives = 213/500 (42%), Gaps = 23/500 (4%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA 199
           E+ V   C+A G+P P I W  +   +        R+     + I  L   DTG + C A
Sbjct: 2   EKVVDIPCQAKGVPPPSITWYKDAAVVEVEKLTRFRQRNDGGLQISGLVPDDTGMFQCFA 61

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL 259
            N+ G V    Y+ V + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L
Sbjct: 62  RNAAGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERIL 121

Query: 260 TGG-----RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
             G     R+T LE+G L I+    +D+G YTC A N  G  + S  L V   T IT  P
Sbjct: 122 ASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPP 181

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           +D  V  G  A+  C    DP + +  +W +    +  ES PR     + SL ++++   
Sbjct: 182 QDQSVIKGTQASMVCGVTHDPRVTIRYIWEKDGATLGTESHPRIRLDRNGSLHISQTWSG 241

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRG 433
           D G YTCR  +        A L V+    AP +    +  ++ +   ++W    P     
Sbjct: 242 DIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWT--KPFDGNS 299

Query: 434 HFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
               Y ++  +E +   ++    V+  ++T+  V   VPA     R+ A N    G  S+
Sbjct: 300 PLIRYILEM-SENNAPWTVLLASVDP-KATSVTVKGLVPARSYQFRLCAVNDVGKGQFSK 357

Query: 494 IISFVTPEGVPGTVQSLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKV 549
               V+    P T      I  G +  +  ++W  P +   NG+L GY I+Y  + G  V
Sbjct: 358 DTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRY-CLAGLPV 416

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKN 604
           G    +   I+D    +  L  L   T Y I +A Y  AG G  S       L  VP   
Sbjct: 417 G---YQFKNITDADVNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVP 473

Query: 605 PDNVEGRGSTPNNLVISWTA 624
           P NV    +    +  +W A
Sbjct: 474 PGNVHAEATNSTTIRFTWNA 493



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 143/633 (22%), Positives = 235/633 (37%), Gaps = 56/633 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           K V++ C   G P P   W KD   V +    R  Q N G  L I  +   D G + C  
Sbjct: 3   KVVDIPCQAKGVPPPSITWYKDAAVVEVEKLTRFRQRNDG-GLQISGLVPDDTGMFQCFA 61

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPI 166
            N  GE ++ +       AP  T  P      +  +V   C+ SG P P I W    + +
Sbjct: 62  RNAAGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERIL 121

Query: 167 SQAPPN-PR-RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           +      PR   +    + I     SD G Y C ATNS G       + V A    IT+ 
Sbjct: 122 ASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWART-RITKP 180

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDVAF 279
           P+D+  + G    + C V   P+  + +I  +   T G     R  +   G L I+    
Sbjct: 181 PQDQSVIKGTQASMVCGVTHDPRVTIRYIWEKDGATLGTESHPRIRLDRNGSLHISQTWS 240

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------EDYEVEAGQSATFRCNAV 332
            D G YTC   +  G    S  L V++  H  + P       E   +    +  F  N+ 
Sbjct: 241 GDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPFDGNS- 299

Query: 333 SDPSLKLSIVWLRGSEP---IDFESEPR--------FVQSNDYSLTVTKSSELDSGQYTC 381
             P ++  +     + P   +    +P+         V +  Y   +   +++  GQ++ 
Sbjct: 300 --PLIRYILEMSENNAPWTVLLASVDPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSK 357

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
             +        + +L  + P   P N       + +  ++ W P       G  +GY ++
Sbjct: 358 DTE--------RVSLPEEPPTAPPQNVIASGRTN-QSIMIQWQPPPESHQNGILKGYIIR 408

Query: 442 TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
                   G   + I +  +     ++  +  +     V A+N A  G  S  ++  T +
Sbjct: 409 YCLAGLPVGYQFKNITD-ADVNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQ 467

Query: 502 GV----PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK-IKYQSVKGTKVGPLLERL 556
           GV    PG V + EA    +  F      P+  NG+  GYK I ++  +  +V  +  R 
Sbjct: 468 GVPTVPPGNVHA-EATNSTTIRFTWNAPSPQFINGINQGYKLIAWEPEQEEEVTMVTAR- 525

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS--- 613
           P   D +     ++GL+  T+Y   +  +T  GDG  S        ++     G  S   
Sbjct: 526 PNFQD-SIHVGFVSGLKKFTEYFTSVLCFTTPGDGPRSTPQLVRTHEDVPGPVGHLSFSE 584

Query: 614 -TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
               +L +SW      E N     YRI W  +N
Sbjct: 585 ILDTSLKVSWQE--PGEKNGILTGYRISWEEYN 615



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 177/477 (37%), Gaps = 65/477 (13%)

Query: 234 KTVVLTCRVFGAPKPEVNWIHNQ-----KELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           K V + C+  G P P + W  +      ++LT  R+     G L+I+ +   D+G + CF
Sbjct: 3   KVVDIPCQAKGVPPPSITWYKDAAVVEVEKLT--RFRQRNDGGLQISGLVPDDTGMFQCF 60

Query: 289 ARNKLGTAQGSGSLTVKE-HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS 347
           ARN  G  Q S  L V     +IT  P D  V  G S    C     P  + +I W +G 
Sbjct: 61  ARNAAGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLACETSGAP--RPAITWQKGE 118

Query: 348 EPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAP 405
             +   S   PRF      SL ++ +   D+G YTC A       EA A L         
Sbjct: 119 RILASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADL--------- 169

Query: 406 SNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTT 465
                  V+ A+  +    P   QS+    +   V   T  D   +IR +    G +  T
Sbjct: 170 -------VVWARTRIT--KPPQDQSVIKGTQASMVCGVTH-DPRVTIRYIWEKDGATLGT 219

Query: 466 EVDKFVPASKN----------------FARVLAFNGAYNGPPSEIISFV--TPEGVPGTV 507
           E    +   +N                  RV++  G  +      +  +   PE    T+
Sbjct: 220 ESHPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATL 279

Query: 508 QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSA 567
            ++E       A  L W KP   N  L+ Y ++  S        LL  +    DP  TS 
Sbjct: 280 STVE-----RRAINLTWTKPFDGNSPLIRYILE-MSENNAPWTVLLASV----DPKATSV 329

Query: 568 KLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV------PFKNPDNVEGRGSTPNNLVIS 621
            + GL P+  Y+  L      G G  SK    V      P   P NV   G T  +++I 
Sbjct: 330 TVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQ 389

Query: 622 WTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           W   PE   N     Y I +        +   ++ D   + L+L +   +  YEI+V
Sbjct: 390 WQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLIIWTNYEIEV 446



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 11/177 (6%)

Query: 422 SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR-- 479
           +WN  SPQ + G  +GYK+  W E + E  +  +        +  V  FV   K F    
Sbjct: 490 TWNAPSPQFINGINQGYKLIAW-EPEQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYF 547

Query: 480 --VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
             VL F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY
Sbjct: 548 TSVLCFTTPGDGPRSTPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGY 607

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           +I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 608 RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 659



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N  ++    A +  V+W P    S  G  +GYK+  W  + G  + R   +  
Sbjct: 1301 VPTAAPRNV-VVHGATATQLDVTWEPPPLDSQNGDIQGYKIYFWEAQRGNLTERVKTLFL 1359

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E++  ++      +     V AFN A +GP S      T +  P    S++   L +++
Sbjct: 1360 AENSV-KLKNLTGYTAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSAPSSVKFSELTTTS 1418

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNG+L GY++ Y+
Sbjct: 1419 VNVSWEAPQFPNGILEGYRLVYE 1441



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 138/347 (39%), Gaps = 48/347 (13%)

Query: 379  YTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVID--AKKAVVSWNP----VSPQ 429
            +   AQT   + EA   L V         P +  ++Q  D  A+  ++SW P    +SP 
Sbjct: 1052 FRITAQTRKGWGEAAEALVVTTEKRDRPQPPSRPMVQQEDVRARSVLLSWEPGSDGLSP- 1110

Query: 430  SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
                  R Y +QT     G  ++    V+   S+   VD+  P +    RV A N   + 
Sbjct: 1111 -----VRYYTIQTRELPSGRWALHSASVSHNASSFI-VDRLKPFTSYKFRVKATNDIGDS 1164

Query: 490  PPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQ 542
              SE    +T     P+  P     L   P  +++  ++W  P  ++ NG+L+G++I+Y+
Sbjct: 1165 EFSEESESLTTLQAAPDEAPTI---LSVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYR 1221

Query: 543  SV--KGTKVGPL---------------LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
             +  +G +   L               +  +  +S P+ T  +L  L    +Y I ++ Y
Sbjct: 1222 ELLYEGLRGFTLRGINNPGATWAELTSMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVY 1281

Query: 586  TKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
               G+G  S  + +F    VP   P NV   G+T   L ++W   P    N     Y+I+
Sbjct: 1282 NAVGEGPSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQNGDIQGYKIY 1341

Query: 641  WRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDG 687
            +     G    +   L   ++ + L N   +  Y + V       DG
Sbjct: 1342 FWEAQRGNLTERVKTLFLAENSVKLKNLTGYTAYMVSVAAFNAAGDG 1388



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ V      G   GYKV  + EKD +   R  +V  
Sbjct: 877  VPSSGPTNVSALATT-SSSMLVRWSEVPEADRNGLVLGYKVM-YKEKDSDTQPRFWLVEG 934

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 935  NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 994

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P + Y
Sbjct: 995  SVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVL----APSARQYTATGLKPESVY 1050

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1051 LFRITAQTRKGWGEAAEAL 1069



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 128/308 (41%), Gaps = 48/308 (15%)

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 637 LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGPPTNLGISN---------- 682

Query: 426 VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
           + P+S+   FR GY  +T    W  +   G + E    L++    N+ ++ + EV    P
Sbjct: 683 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNP 742

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
            +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 743 FTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTA---SETSLWLRWMPL 799

Query: 527 PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
           PE     N   +GYKIKY    G   G  L  +  + D       +  LE  T+YR+ + 
Sbjct: 800 PEMEYNGNPESVGYKIKYSRSDGH--GKTLSHV--VQDRVERDYTIEDLEEWTEYRVQVQ 855

Query: 584 GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
            +   G G  S+ +       VP   P NV    +T +++++ W+ +PE + N     Y+
Sbjct: 856 AFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYK 915

Query: 639 IFWRRHNT 646
           + ++  ++
Sbjct: 916 VMYKEKDS 923


>gi|449283519|gb|EMC90135.1| Contactin-3, partial [Columba livia]
          Length = 908

 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 169/636 (26%), Positives = 278/636 (43%), Gaps = 48/636 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P     ++ + N    + I + +  D G Y 
Sbjct: 119 AAKGSTVKLECFALGNPVPQINWRRTDGLPFPSKIKLRKSN--GMIEIPNFQQEDAGLYE 176

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    +    A E+T+ ++C+ASG P+P   WV NG
Sbjct: 177 CITENSRGKNIARG-RLTYYAKPHWIQTIKDTEVAVEDTLYWDCRASGKPKPSYRWVKNG 235

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + +S      R ++    +TI NL  +D+G Y C A N  G +Y    + V+A AP+ ++
Sbjct: 236 EQLSV---EGRIQIENGALTISNLNLTDSGRYQCIAENKHGVIYSSAELRVVASAPDFSK 292

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
            P  +      G TV   C+   +PK + +W    ++L    R T+L+ G L+I +V   
Sbjct: 293 NPMKKLIQVQIGSTVDFECKPKASPKAKCSWKKGGEQLHENERITLLKDGGLRIANVTKV 352

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ GTA GS +L V E T I   P   +V  G+S    C    DP L +S
Sbjct: 353 DAGSYTCLATNQFGTASGSTNLIVTEPTRIILAPSSMDVTVGESVVLPCQVQHDPILDIS 412

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S    L +       SG+Y C  +TE+D + + A L
Sbjct: 413 FTWYFNGTLTDFKKDASHFEKVGGSASGDLMIRNIQLKHSGKYVCMVKTEVDSVASAADL 472

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
            V+     P +  + ++ D   A +SW       +PV+  +++       G++  T    
Sbjct: 473 IVRGSPGPPEHVKVDEITDT-TAQISWQEGTDNHSPVTTYTVQARTPFSVGWQRVT---- 527

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ ++I   G++ TT V    P  +   RV+A N    G PS     V T E VP 
Sbjct: 528 ----TVPDVI--DGKTFTTTVVDLNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 581

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S  +   GS S   + W  +  E  NG   GY + ++    T     ++ +    D 
Sbjct: 582 IPPSEVSGGGGSRSELVITWDPIPEELQNGEGFGYVVAFRPYGTTT---WIQTVVTSPDT 638

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y + +  Y   G+G  S    +F     P   P  V     + + 
Sbjct: 639 PRYVFRNESILPFSPYEVKVGVYNNKGEGPFSSVTTVFSAEEEPSIAPSGVSATSLSSSV 698

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FWRRHNTGEAWNQ 652
           + +SWTA+P    +     Y + +W      E+ N+
Sbjct: 699 IEVSWTAIPWKMSSGRLLGYEVRYWNNGGKEESSNR 734



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 163/638 (25%), Positives = 251/638 (39%), Gaps = 88/638 (13%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  V+ SD G+YTC V++ V  ++       ++           P   V+ PE + AA
Sbjct: 61  LYIAKVDPSDVGNYTCVVTSTVTNSQVLGSPTPLVLRTDGVMGEYEPKIEVQFPETLPAA 120

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P    P   + +     I I N ++ D G Y C
Sbjct: 121 KGSTVKLECFALGNPVPQINWRRTDGLPF---PSKIKLRKSNGMIEIPNFQQEDAGLYEC 177

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
              NS G   K++    L +   P   +  KD       T+   CR  G PKP   W+ N
Sbjct: 178 ITENSRG---KNIARGRLTYYAKPHWIQTIKDTEVAVEDTLYWDCRASGKPKPSYRWVKN 234

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
            ++L+      +E G L I+++   DSG Y C A NK G    S  L  V      +  P
Sbjct: 235 GEQLSVEGRIQIENGALTISNLNLTDSGRYQCIAENKHGVIYSSAELRVVASAPDFSKNP 294

Query: 315 ED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
                +V+ G +  F C   + P  K S  W +G E +  E+E R     D  L +   +
Sbjct: 295 MKKLIQVQIGSTVDFECKPKASPKAKCS--WKKGGEQL-HENE-RITLLKDGGLRIANVT 350

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAV----VSWNP 425
           ++D+G YTC A  +         L V  P   + APS+   + V   +  V    V  +P
Sbjct: 351 KVDAGSYTCLATNQFGTASGSTNLIVTEPTRIILAPSS---MDVTVGESVVLPCQVQHDP 407

Query: 426 VSPQSLRGHFRGY-----KVQTWTEKDGEGSIRELIVNKGE---------STTTEVDKFV 471
           +   S   +F G      K  +  EK G  +  +L++   +            TEVD   
Sbjct: 408 ILDISFTWYFNGTLTDFKKDASHFEKVGGSASGDLMIRNIQLKHSGKYVCMVKTEVDSVA 467

Query: 472 PASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPN 531
            A+    R                      G PG  + ++   +  +   + W +    +
Sbjct: 468 SAADLIVR----------------------GSPGPPEHVKVDEITDTTAQISWQEGTDNH 505

Query: 532 GVLMGYKIKYQ---SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
             +  Y ++ +   SV   +V      +P + D  T +  +  L P  +Y   +    K 
Sbjct: 506 SPVTTYTVQARTPFSVGWQRV----TTVPDVIDGKTFTTTVVDLNPWVEYEFRVVASNKI 561

Query: 589 GDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G G  S      +    VP   P  V G G + + LVI+W  +PE   N   F Y + +R
Sbjct: 562 GGGEPSLPSEKVRTEEAVPEIPPSEVSGGGGSRSELVITWDPIPEELQNGEGFGYVVAFR 621

Query: 643 RHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
            + T   W Q  V        V  N+    F PYE+KV
Sbjct: 622 PYGT-TTWIQTVVTSPDTPRYVFRNESILPFSPYEVKV 658



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 149/637 (23%), Positives = 253/637 (39%), Gaps = 81/637 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  ++   RI   N   +L I ++  +D G Y C   N  G   
Sbjct: 219 CRASGKPKPSYRWVKNGEQLSVEGRIQIEN--GALTISNLNLTDSGRYQCIAENKHGVIY 276

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           S S +L V+A AP F+  P  + I      TV FECK    P+ +  W   G+ + +   
Sbjct: 277 S-SAELRVVASAPDFSKNPMKKLIQVQIGSTVDFECKPKASPKAKCSWKKGGEQLHENER 335

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP-EITEAPKDEYT 230
               K G  RI   N+ K D G+Y C ATN  G        N++   P  I  AP     
Sbjct: 336 ITLLKDGGLRIA--NVTKVDAGSYTCLATNQFGTASGST--NLIVTEPTRIILAPSSMDV 391

Query: 231 VDGKTVVLTCRVFGAPKPEVN--WIHN-----------QKELTGGRYTILETGDLKITDV 277
             G++VVL C+V   P  +++  W  N             E  GG      +GDL I ++
Sbjct: 392 TVGESVVLPCQVQHDPILDISFTWYFNGTLTDFKKDASHFEKVGGS----ASGDLMIRNI 447

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVK------EHTHITDQPEDYEVEAGQSATFRCNA 331
               SG+Y C  + ++ +   +  L V+      EH  + +  +     + Q  T   + 
Sbjct: 448 QLKHSGKYVCMVKTEVDSVASAADLIVRGSPGPPEHVKVDEITDTTAQISWQEGTDNHSP 507

Query: 332 VSDPSLK----LSIVWLRGSEPIDFESEPRFVQSN-------DYSLTVTKSSELDSGQYT 380
           V+  +++     S+ W R +   D      F  +        +Y   V  S+++  G+ +
Sbjct: 508 VTTYTVQARTPFSVGWQRVTTVPDVIDGKTFTTTVVDLNPWVEYEFRVVASNKIGGGEPS 567

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH------ 434
                    + ++   T +   E P +          + V++W+P+  +   G       
Sbjct: 568 ---------LPSEKVRTEEAVPEIPPSEVSGGGGSRSELVITWDPIPEELQNGEGFGYVV 618

Query: 435 -FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
            FR Y   TW +           V + ES        +P S    +V  +N    GP S 
Sbjct: 619 AFRPYGTTTWIQTVVTSPDTPRYVFRNES-------ILPFSPYEVKVGVYNNKGEGPFSS 671

Query: 494 IISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVG 550
           + +  + E  P    S + A  L SS   + W  +  +  +G L+GY+++Y +  G +  
Sbjct: 672 VTTVFSAEEEPSIAPSGVSATSLSSSVIEVSWTAIPWKMSSGRLLGYEVRYWNNGGKEES 731

Query: 551 PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNP 605
               R+    +   TS ++ GL+ +  Y   +  Y  AG G  S  +        P + P
Sbjct: 732 S--NRVKAAGN--ETSIRITGLKSNLAYYTAVRAYNSAGAGPFSATVNATTKKTPPSQPP 787

Query: 606 DNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
            NV     T + +++SW  +  +E+ +    Y++ +R
Sbjct: 788 GNVMWN-VTDSRVILSWEEVRAMENESEVTGYKVLYR 823



 Score = 39.7 bits (91), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 28/170 (16%)

Query: 232 DGKTVVLTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADS 282
           +G+ VVL C     P P        WI N+     +    R+   ETG L I  V  +D 
Sbjct: 16  EGQGVVLLC----GPPPRAGDLSFAWIFNEYPSFVQEDSRRFVSQETGHLYIAKVDPSDV 71

Query: 283 GEYTCFARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNA 331
           G YTC   + +  +Q  GS   L ++    + +         PE      G +    C A
Sbjct: 72  GNYTCVVTSTVTNSQVLGSPTPLVLRTDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFA 131

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTC 381
           + +P  +++  W R ++ + F S+ +  +SN   + +    + D+G Y C
Sbjct: 132 LGNPVPQIN--WRR-TDGLPFPSKIKLRKSNGM-IEIPNFQQEDAGLYEC 177


>gi|312384902|gb|EFR29518.1| hypothetical protein AND_01410 [Anopheles darlingi]
          Length = 2112

 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 169/594 (28%), Positives = 260/594 (43%), Gaps = 56/594 (9%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPI-NPSDRISQGN-YGKSLIIKHVE 95
           R  +V    + VEL CI    PL +  T+W KDG+PI N     +Q + + +++ + HV 
Sbjct: 118 RSVQVVRGAETVELECIANARPLHELETVWLKDGIPIENTGILFAQTDPWNRTITLLHVN 177

Query: 96  FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE--PEFINAAEEET-------VTFE 146
            +  G YTC+V    G   +      V +    TV+  P F+     ET       +   
Sbjct: 178 LTHTGEYTCQVRMRTGGHPT------VFSMARVTVQEPPTFVTPLRTETLGDYGSRIILP 231

Query: 147 CKASGLPEPEIHWVHNGKPI-SQAPPNPRRKVGPNRITIENLRKS--DTGNYGCNATNSL 203
           C   G+P P I W  N +PI +Q      R    +  ++E LR S  DT  + C A+N  
Sbjct: 232 CDVIGVPMPSIRWYKNAQPIEAQGVGTGTRYTVQDDNSLEILRLSIDDTAMFQCLASNEA 291

Query: 204 GYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTG 261
           G      ++ V    P +   P ++  +DGK   ++CR   AP P + W++N      + 
Sbjct: 292 GERSVYTWLKVKTSMPIMEVPPANQTVLDGKDATISCRAIAAPTPNITWLYNDTYPIESS 351

Query: 262 GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA 321
            R  +L++GDL +++V  +DSG YTCF  N+ G   GSG LTV   T I   P D  V  
Sbjct: 352 ARVQVLDSGDLLLSNVRESDSGLYTCFRENEAGRITGSGYLTVLVRTQIVRPPADTIVLL 411

Query: 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTC 381
           G SAT  C   SDP++  +I W R    +  ++  R     D +L +T+    D GQY C
Sbjct: 412 GHSATLECGVSSDPTVPYNIDWYREPNRLPIKNSHRIGVRGDGTLEITEVRPSDVGQYVC 471

Query: 382 RAQTELDFIEAQATLTV-QVPLEAPSNFTL--IQVIDAKKAVVSWNPVSPQSLRGHFRGY 438
              +        A L+V ++P  APSN     +     +   VSW P       G+ +  
Sbjct: 472 IVTSPGGNETRSARLSVIELPF-APSNVRAERLSTPQHRAINVSWTP----GFDGNSKLI 526

Query: 439 KVQTWTEKDGE-GSIRELIVN---KGESTTTEVDKFVPASKNFA-----RVLAFNGAYNG 489
           K      +  E G + + ++N   +  + +  V   + A+   A     RV A N    G
Sbjct: 527 KFIVQRREVPELGPLPDPLLNWVTESANVSATVRWLLLANLKAATAYQFRVSAVNRVGEG 586

Query: 490 PPSEIISFV-----TPEGVP-GTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKY 541
            PSE  + V      P G P G V S  +    S+   ++W  P  E  NG ++GY I+Y
Sbjct: 587 SPSEPSNVVRLPQEAPSGGPVGFVGSARS----STEIIVQWQPPLEEHRNGQILGYIIRY 642

Query: 542 QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK 595
           + + G    P   R   I++    +  +  L     Y + +A Y   G G  S+
Sbjct: 643 R-LFGYNASPWNYR--NITNEAQRNYLIQELITWKDYVVEIAAYNNMGVGVYSE 693



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 151/610 (24%), Positives = 239/610 (39%), Gaps = 71/610 (11%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVE 95
           R + +     ++ L C   G P+P   W K+  PI      +   Y      SL I  + 
Sbjct: 217 RTETLGDYGSRIILPCDVIGVPMPSIRWYKNAQPIEAQGVGTGTRYTVQDDNSLEILRLS 276

Query: 96  FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEP 155
             D   + C  SN  GE   Y+      + P   V P      + +  T  C+A   P P
Sbjct: 277 IDDTAMFQCLASNEAGERSVYTWLKVKTSMPIMEVPPANQTVLDGKDATISCRAIAAPTP 336

Query: 156 EIHWVHNGK-PISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
            I W++N   PI  +    R +V     + + N+R+SD+G Y C   N  G +    Y+ 
Sbjct: 337 NITWLYNDTYPIESSA---RVQVLDSGDLLLSNVRESDSGLYTCFRENEAGRITGSGYLT 393

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKEL---TGGRYTILE 268
           VL    +I   P D   + G +  L C V   P     ++W      L      R  +  
Sbjct: 394 VLVRT-QIVRPPADTIVLLGHSATLECGVSSDPTVPYNIDWYREPNRLPIKNSHRIGVRG 452

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
            G L+IT+V  +D G+Y C   +  G    S  L+V E   +   P +   E   +   R
Sbjct: 453 DGTLEITEVRPSDVGQYVCIVTSPGGNETRSARLSVIE---LPFAPSNVRAERLSTPQHR 509

Query: 329 CNAVS-----DPSLKLS--IVWLR-----GSEP---IDFESEPRFVQSNDYSLTVTKSSE 373
              VS     D + KL   IV  R     G  P   +++ +E   V +    L +     
Sbjct: 510 AINVSWTPGFDGNSKLIKFIVQRREVPELGPLPDPLLNWVTESANVSATVRWLLLANLKA 569

Query: 374 LDSGQYTCRAQTEL-DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKA---VVSWNPVSPQ 429
             + Q+   A   + +   ++ +  V++P EAPS   +  V  A+ +   +V W P   +
Sbjct: 570 ATAYQFRVSAVNRVGEGSPSEPSNVVRLPQEAPSGGPVGFVGSARSSTEIIVQWQPPLEE 629

Query: 430 SLRGHFRGYKVQ---------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
              G   GY ++          W  ++        I N+ +     + + +        +
Sbjct: 630 HRNGQILGYIIRYRLFGYNASPWNYRN--------ITNEAQRNYL-IQELITWKDYVVEI 680

Query: 481 LAFNGAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWV--KPEQPNGVLMGY 537
            A+N    G  SE     T EG+P      +  +   S+A  + W    P+Q NG+  GY
Sbjct: 681 AAYNNMGVGVYSEGAKIKTKEGIPEAPPTGVRTVAFNSTAVRVWWTPPNPQQINGINQGY 740

Query: 538 KI---KYQ--SVKGTK-VGPLLERL------PYISDPTT-TSAKLAGLEPSTKYRIHLAG 584
           K+   +Y+  SV GT   GPL + +      P + DP    SA L GLE  T Y + +  
Sbjct: 741 KLQAWRYELPSVPGTDDAGPLEQEMRTLTVAPNLLDPLAEQSAILGGLEKYTVYNVTVLC 800

Query: 585 YTKAGDGAES 594
           +T  GDG  S
Sbjct: 801 FTDPGDGERS 810



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 153/673 (22%), Positives = 259/673 (38%), Gaps = 78/673 (11%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN---GVGEAKSYS 117
           P P   W  D  P+    + +Q      LII   + SD  +Y     N   G  E   + 
Sbjct: 31  PAPSVTWQTDEGPLTYDIKYAQ-TANNQLIILSTDESDIRAYRARAINTQIGREEITGF- 88

Query: 118 IDLSVLA--------APYFTVEPEFINAAEE-------ETVTFECKASGLP--EPEIHWV 160
           + L+V          +PY  + PE I            ETV  EC A+  P  E E  W+
Sbjct: 89  VRLNVTTDGSGSGSSSPYAEIAPEIIVHPRSVQVVRGAETVELECIANARPLHELETVWL 148

Query: 161 HNGKPISQ-----APPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLG---YVYKDVYV 212
            +G PI       A  +P  +     IT+ ++  + TG Y C      G    V+    V
Sbjct: 149 KDGIPIENTGILFAQTDPWNRT----ITLLHVNLTHTGEYTCQVRMRTGGHPTVFSMARV 204

Query: 213 NVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL------TGGRYTI 266
            V      +T    +     G  ++L C V G P P + W  N + +      TG RYT+
Sbjct: 205 TVQEPPTFVTPLRTETLGDYGSRIILPCDVIGVPMPSIRWYKNAQPIEAQGVGTGTRYTV 264

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD-QPEDYEVEAGQSA 325
            +   L+I  ++  D+  + C A N+ G       L VK    I +  P +  V  G+ A
Sbjct: 265 QDDNSLEILRLSIDDTAMFQCLASNEAGERSVYTWLKVKTSMPIMEVPPANQTVLDGKDA 324

Query: 326 TFRCNAVSDPSLKLSIVWL-RGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           T  C A++ P+   +I WL   + PI+  +  + + S D  L ++   E DSG YTC  +
Sbjct: 325 TISCRAIAAPTP--NITWLYNDTYPIESSARVQVLDSGD--LLLSNVRESDSGLYTCFRE 380

Query: 385 TELDFIEAQATLTV----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
            E   I     LTV    Q+         L+      +  VS +P  P ++         
Sbjct: 381 NEAGRITGSGYLTVLVRTQIVRPPADTIVLLGHSATLECGVSSDPTVPYNI--------- 431

Query: 441 QTWTEKDGEGSIR--ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
             W  +     I+    I  +G+ T  E+ +  P+       +  +   N   S  +S +
Sbjct: 432 -DWYREPNRLPIKNSHRIGVRGDGTL-EITEVRPSDVGQYVCIVTSPGGNETRSARLSVI 489

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLE-RLP 557
                P  V++         A  + W      N  L+ + ++ + V   ++GPL +  L 
Sbjct: 490 ELPFAPSNVRAERLSTPQHRAINVSWTPGFDGNSKLIKFIVQRREVP--ELGPLPDPLLN 547

Query: 558 YISDPTTTSAK-----LAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV------PFKNPD 606
           ++++    SA      LA L+ +T Y+  ++   + G+G+ S+    V      P   P 
Sbjct: 548 WVTESANVSATVRWLLLANLKAATAYQFRVSAVNRVGEGSPSEPSNVVRLPQEAPSGGPV 607

Query: 607 NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHN-TGEAWNQDDVLDWRQSELVL 665
              G   +   +++ W    E   N     Y I +R        WN  ++ +  Q   ++
Sbjct: 608 GFVGSARSSTEIIVQWQPPLEEHRNGQILGYIIRYRLFGYNASPWNYRNITNEAQRNYLI 667

Query: 666 ANQPTFQPYEIKV 678
               T++ Y +++
Sbjct: 668 QELITWKDYVVEI 680



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 143/624 (22%), Positives = 226/624 (36%), Gaps = 109/624 (17%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIW-SKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGS 101
           +  L  K   + C     P P   W   D  PI  S R+   + G  L++ +V  SD G 
Sbjct: 316 QTVLDGKDATISCRAIAAPTPNITWLYNDTYPIESSARVQVLDSGD-LLLSNVRESDSGL 374

Query: 102 YTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEP--EIHW 159
           YTC   N  G     S  L+VL        P         + T EC  S  P     I W
Sbjct: 375 YTCFRENEAGRITG-SGYLTVLVRTQIVRPPADTIVLLGHSATLECGVSSDPTVPYNIDW 433

Query: 160 VH--NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--L 215
               N  PI  +     R  G   + I  +R SD G Y C  T+  G   +   ++V  L
Sbjct: 434 YREPNRLPIKNSHRIGVR--GDGTLEITEVRPSDVGQYVCIVTSPGGNETRSARLSVIEL 491

Query: 216 AHAP-----EITEAPKDEYT-------VDGKTVVLTCRV-------FG-APKPEVNWIHN 255
             AP     E    P+            DG + ++   V        G  P P +NW+  
Sbjct: 492 PFAPSNVRAERLSTPQHRAINVSWTPGFDGNSKLIKFIVQRREVPELGPLPDPLLNWVTE 551

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE 315
              ++     +L      + ++  A + ++   A N++G  +GS S    E +++   P+
Sbjct: 552 SANVSATVRWLL------LANLKAATAYQFRVSAVNRVG--EGSPS----EPSNVVRLPQ 599

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVW--------------------LRG--SEPIDFE 353
             E  +G    F  +A S  S ++ + W                    L G  + P ++ 
Sbjct: 600 --EAPSGGPVGFVGSARS--STEIIVQWQPPLEEHRNGQILGYIIRYRLFGYNASPWNYR 655

Query: 354 SEPRFVQSN----------DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE 403
           +     Q N          DY + +   + +  G Y+          E     T +   E
Sbjct: 656 NITNEAQRNYLIQELITWKDYVVEIAAYNNMGVGVYS----------EGAKIKTKEGIPE 705

Query: 404 APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW---------TEKDG--EGSI 452
           AP         ++    V W P +PQ + G  +GYK+Q W         T+  G  E  +
Sbjct: 706 APPTGVRTVAFNSTAVRVWWTPPNPQQINGINQGYKLQAWRYELPSVPGTDDAGPLEQEM 765

Query: 453 RELIVNKGE-STTTEVDKFVPASKNF----ARVLAFNGAYNGPPSEIISFVTPEGVPGTV 507
           R L V         E    +   + +      VL F    +G  S   +  T E VP  V
Sbjct: 766 RTLTVAPNLLDPLAEQSAILGGLEKYTVYNVTVLCFTDPGDGERSVPSTVRTLEDVPDEV 825

Query: 508 QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSA 567
            SL+   +   A  + W  P + NG+L+GY+++Y        GP   R   ++     S 
Sbjct: 826 ASLQFTGISDRAVTVLWDPPRRTNGILLGYQVRYYERDS---GPGTARSVNLTA-EANSL 881

Query: 568 KLAGLEPSTKYRIHLAGYTKAGDG 591
           ++  L  +T Y   + G+T  G+G
Sbjct: 882 QVTHLTATTHYTFEVNGWTAVGEG 905



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 93/237 (39%), Gaps = 40/237 (16%)

Query: 425  PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI--VNKGESTTTEVDKF-VPASKNFARVL 481
            P++  S+R  +       W      G  R L   ++   ST     K  VP  +  + VL
Sbjct: 1455 PITTTSVRVQWNALATSAWNGDTETGGYRILYQPLSDFPSTLQSTPKLDVPGVREVSAVL 1514

Query: 482  A--------------FNGAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWVK 526
                           +N   +GPP+  ++    E VP G   ++E + L S+   L+W  
Sbjct: 1515 TELTQDRNYEIILQPYNSQGSGPPTPPVAVYVGEAVPIGEPLNIEGVALSSTEVRLRWSP 1574

Query: 527  PEQP--NGVLMGYKIKY-----------QSVKGTKVG----PLLERLPYISDPTTTSAKL 569
            P+Q   NG L+GYKI Y            ++ G   G    P  E +  +   + T   L
Sbjct: 1575 PQQSTQNGELLGYKIFYLVTNTSEDESLAAIGGADGGDHRKPPEEEIEVVPA-SYTMHNL 1633

Query: 570  AGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKN----PDNVEGRGSTPNNLVISW 622
              L+  T+YRI +  +  AGDG  S  +           P  +     T N+L++SW
Sbjct: 1634 VFLDKYTEYRIQILAFNPAGDGPRSAPITVQTLAGLPGPPTQLRFSDITMNSLMVSW 1690



 Score = 46.6 bits (109), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 18/163 (11%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYK----VQTWTEKDGEGSIREL 455
            VP+  P N   +  + + +  + W+P    +  G   GYK    V   +E +   +I   
Sbjct: 1550 VPIGEPLNIEGV-ALSSTEVRLRWSPPQQSTQNGELLGYKIFYLVTNTSEDESLAAIGGA 1608

Query: 456  IVNKGESTTTEVDKFVPASKNF-------------ARVLAFNGAYNGPPSEIISFVTPEG 502
                      E  + VPAS                 ++LAFN A +GP S  I+  T  G
Sbjct: 1609 DGGDHRKPPEEEIEVVPASYTMHNLVFLDKYTEYRIQILAFNPAGDGPRSAPITVQTLAG 1668

Query: 503  VPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVK 545
            +PG    L    +  ++  + W  P + NG+++GY + Y++ +
Sbjct: 1669 LPGPPTQLRFSDITMNSLMVSWEPPRKRNGLILGYIVAYETTE 1711



 Score = 42.7 bits (99), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 25/134 (18%)

Query: 420  VVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSI-RELIVNKG-------ESTTTEVDKFV 471
            VV W+ V      G   GY+V         GSI R  I++K         +T TE+ KFV
Sbjct: 1163 VVRWHEVPKVHRNGQIEGYRVYY-------GSIGRTPILHKTIPNNSTFTATLTELRKFV 1215

Query: 472  PASKNFARVLAF----NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKP 527
            P      +VLA+    +G  + PP  + +F    G P  V   +   +  S   + W  P
Sbjct: 1216 PYD---VQVLAYTRLGDGTLSTPPVRVQTFQDTPGAPSNVSFPD---VSFSMARIIWDVP 1269

Query: 528  EQPNGVLMGYKIKY 541
            ++PNG ++ Y++ Y
Sbjct: 1270 DEPNGEILAYRVTY 1283



 Score = 40.4 bits (93), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 48/219 (21%), Positives = 83/219 (37%), Gaps = 39/219 (17%)

Query: 457  VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-IISFVTPEGVPG------TVQS 509
            VN  +++T  V    P +    R++A N      PSE    F T +  P       TV++
Sbjct: 972  VNDPDASTVTVLGLTPFTSYRLRLIACNVVGRSEPSEPTKDFQTIQAPPKHPPFNVTVRA 1031

Query: 510  LEAIPLGSSAFYLKWVKPEQPN--GVLMGYKIKYQSVK--------------------GT 547
            + A         ++W+  +Q    G   GY I Y+++                      T
Sbjct: 1032 MSA-----KELRVRWIPLQQSEWYGNPKGYNITYRNINEAADDDASLASLAAAGGSSGAT 1086

Query: 548  KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPF 602
                   R   I D T  S  L GL+  + Y + +    + G+  +S + F      VP 
Sbjct: 1087 GALGGGLRSVLIEDSTANSHVLEGLKEWSVYEVVMTAVNEVGESQDSPHAFERTREGVPS 1146

Query: 603  KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
              P  VE   ++   +V+ W  +P++  N     YR+++
Sbjct: 1147 MGPAVVEANATSSTTIVVRWHEVPKVHRNGQIEGYRVYY 1185



 Score = 40.0 bits (92), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 94/249 (37%), Gaps = 21/249 (8%)

Query: 414  IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTT-EVDKFVP 472
            + A++   SW P      R  F   +  T   ++ EG+   L      S T+       P
Sbjct: 1357 VQAEQITFSWTPG-----RDGFAPLRYYTVQLRENEGAWSTLPERVDPSVTSYTASGLKP 1411

Query: 473  ASKNFARVLAFN--GAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPE 528
             +    R+ A N  G  +  P  + +   P      +  L+ +P+ +++  ++W  +   
Sbjct: 1412 HTYYQFRIRATNDLGPSSYSPESMQTRTLPAAPSAGITGLKVVPITTTSVRVQWNALATS 1471

Query: 529  QPNGVLM--GYKIKYQSVKGTKVGPLLERLPYISDPTT--TSAKLAGLEPSTKYRIHLAG 584
              NG     GY+I YQ +  +     L+  P +  P     SA L  L     Y I L  
Sbjct: 1472 AWNGDTETGGYRILYQPL--SDFPSTLQSTPKLDVPGVREVSAVLTELTQDRNYEIILQP 1529

Query: 585  YTKAGDGAESKYLFY-----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI 639
            Y   G G  +  +       VP   P N+EG   +   + + W+   +   N     Y+I
Sbjct: 1530 YNSQGSGPPTPPVAVYVGEAVPIGEPLNIEGVALSSTEVRLRWSPPQQSTQNGELLGYKI 1589

Query: 640  FWRRHNTGE 648
            F+   NT E
Sbjct: 1590 FYLVTNTSE 1598


>gi|190339368|gb|AAI62590.1| Contactin 2 [Danio rerio]
          Length = 1040

 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 183/706 (25%), Positives = 295/706 (41%), Gaps = 59/706 (8%)

Query: 26  ASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGN 84
           AS  + AP  +     +  AL  +  +L C   G P+P+  W K DG+ + P  ++    
Sbjct: 231 ASPRKTAPNIRVRFPAETYALSGQTAQLECFAYGNPIPKIRWRKVDGI-LPP--KVGASV 287

Query: 85  YGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET-- 142
            G  LII  + F D+G Y CEV N  G  +++   +SV A P +    + ++ +E E   
Sbjct: 288 DGPILIIPELNFDDEGMYECEVYNSEGR-ETHQGRVSVQAQPDWL---QVMSDSEVEISS 343

Query: 143 -VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATN 201
            + + C A+G P P I W+ NG  +       R +V   R+ I NL   D+G Y C A N
Sbjct: 344 ELQWSCAAAGKPRPTIRWLRNGHALIT---QDRVEVNNGRLKIANLALEDSGMYQCVAEN 400

Query: 202 SLGYVYKDVYVNVLAHAPEITEAPKDEYT--VDGKTVVLTCRVFGAPKPEVNWIHNQKEL 259
               +Y +  + V   AP+    P  +      G  V + C+   APKP + W    + L
Sbjct: 401 KHSTIYSNAELRVQVQAPDFRLNPVRKLVPAARGGQVKMECKPRAAPKPTLFWSRGTELL 460

Query: 260 TGG-RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYE 318
           T   R T+   G L I +++ AD G+YTCFA N LG A  +G L+V++ T IT  P + +
Sbjct: 461 TNSTRITVTPDGILWIYNISRADEGKYTCFAENYLGKANSTGHLSVRDATKITLAPSNAD 520

Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP----RFVQSNDY--SLTVTKSS 372
           +  G++AT +C+A  DP++ L+  W     P+D E EP    R ++  +    L +    
Sbjct: 521 INQGENATLQCHASHDPTMDLTFTWSLNGVPLDLE-EPNGHYRRMEGKETIGDLVIVNGQ 579

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDA------KKAVVSWNPV 426
              +G YTC AQT +D   A A L V+ P   P    +  V D        +   + +P+
Sbjct: 580 LSHAGTYTCTAQTVVDSAMASAKLVVRGPPGPPGGLVVTSVNDTSVELRWSRGYDNHSPI 639

Query: 427 SPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
               + G  R  +   W     + +  E     G + +  V    P      +V+A N  
Sbjct: 640 GKYVILG--RSSQTHDWKRMRTDPANIE-----GNAESARVIDLRPWMDYEFQVIASNIL 692

Query: 487 YNGPPSEIISFV-TPEGVPGTVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQ 542
            +G PS       T E  P    S      G+ +   + W  +  E  NG   GY + ++
Sbjct: 693 GSGEPSMPSPRAQTKEAAPTVAPSGLGGGGGNRNELIITWTPMAREYQNGDSFGYILAFR 752

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLA----GLEPSTKYRIHLAGYTKAGDGAESKYLF 598
                K G  +     +  P   S++       L     + + +  Y K G+G  S+   
Sbjct: 753 -----KQG--IPTWTVVKVPNVESSRYVYSNDSLTAYCPFEVRIKAYNKKGEGPFSQIAV 805

Query: 599 Y-----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI-FWRRHNTGEAWNQ 652
                  P  +P  +     T   + +SW  +  +  N     Y I +WR+H    A ++
Sbjct: 806 VHSAEEEPTVSPRRINATALTAFEIQVSWEPIQHLNINGVLRGYEIRYWRQHEREAAADR 865

Query: 653 DDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNK 698
                   +  V   +P    Y I V+   +   G  S R  ++ K
Sbjct: 866 VRTAGLENTARVTGLRPNTL-YHITVLAYNSAGTGPASPRTTVITK 910



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 170/728 (23%), Positives = 291/728 (39%), Gaps = 97/728 (13%)

Query: 33   PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
            P    V    EV + + +++  C   G P P   W ++G  +   DR+   N    L I 
Sbjct: 328  PDWLQVMSDSEVEI-SSELQWSCAAAGKPRPTIRWLRNGHALITQDRVEVNN--GRLKIA 384

Query: 93   HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKAS 150
            ++   D G Y C   N      S +     + AP F + P  + + AA    V  ECK  
Sbjct: 385  NLALEDSGMYQCVAENKHSTIYSNAELRVQVQAPDFRLNPVRKLVPAARGGQVKMECKPR 444

Query: 151  GLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT-IENLRKSDTGNYGCNATNSLGYVYKD 209
              P+P + W    + ++ +    R  V P+ I  I N+ ++D G Y C A N LG     
Sbjct: 445  AAPKPTLFWSRGTELLTNST---RITVTPDGILWIYNISRADEGKYTCFAENYLGKANST 501

Query: 210  VYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVN--WIHNQKELT----GGR 263
             +++V   A +IT AP +     G+   L C     P  ++   W  N   L      G 
Sbjct: 502  GHLSV-RDATKITLAPSNADINQGENATLQCHASHDPTMDLTFTWSLNGVPLDLEEPNGH 560

Query: 264  YTILE----TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH-----ITDQP 314
            Y  +E     GDL I +   + +G YTC A+  + +A  S  L V+         +    
Sbjct: 561  YRRMEGKETIGDLVIVNGQLSHAGTYTCTAQTVVDSAMASAKLVVRGPPGPPGGLVVTSV 620

Query: 315  EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFE---SEPRFVQSN--------- 362
             D  VE   S  +  ++     +   ++  R S+  D++   ++P  ++ N         
Sbjct: 621  NDTSVELRWSRGYDNHS----PIGKYVILGRSSQTHDWKRMRTDPANIEGNAESARVIDL 676

Query: 363  ----DYSLTVTKSSELDSGQYTC---RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVID 415
                DY   V  S+ L SG+ +    RAQT+    EA  T+       APS        +
Sbjct: 677  RPWMDYEFQVIASNILGSGEPSMPSPRAQTK----EAAPTV-------APSG-LGGGGGN 724

Query: 416  AKKAVVSWNPVSPQSLRGH-------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
              + +++W P++ +   G        FR   + TWT            V   +S T    
Sbjct: 725  RNELIITWTPMAREYQNGDSFGYILAFRKQGIPTWTVVKVPNVESSRYVYSNDSLTA--- 781

Query: 469  KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPG-TVQSLEAIPLGSSAFYLKW--V 525
             + P      R+ A+N    GP S+I    + E  P  + + + A  L +    + W  +
Sbjct: 782  -YCPFE---VRIKAYNKKGEGPFSQIAVVHSAEEEPTVSPRRINATALTAFEIQVSWEPI 837

Query: 526  KPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
            +    NGVL GY+I+Y      +      R   + +    +A++ GL P+T Y I +  Y
Sbjct: 838  QHLNINGVLRGYEIRYWRQHEREAAADRVRTAGLEN----TARVTGLRPNTLYHITVLAY 893

Query: 586  TKAGDGAESKYLFYV-----PFKNPDNVEGR--GSTPNNLVISWTAMPEIEHNAPHFKYR 638
              AG G  S     +     P + P NV  +  GS    + + W  +  +++ +    Y+
Sbjct: 894  NSAGTGPASPRTTVITKKPPPNRPPGNVSWKVDGSW---VTVRWDHVKSMDNESAVLGYK 950

Query: 639  IFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNK 698
            + ++     E  +   VL+  ++ + L   P    Y +  +++W +  G+G+  E IV++
Sbjct: 951  VLYKH----EGQSALKVLEKSKTSVKLP-LPKDNGYVVLEIRSWGD-GGDGAAHETIVSR 1004

Query: 699  GESTTTEV 706
               T   V
Sbjct: 1005 DSGTGMMV 1012



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 108/301 (35%), Gaps = 32/301 (10%)

Query: 124 AAPYFTVEPEFINAAE---EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN 180
           + P F  +P  +   E   E  VT  C+A   P     W  NG  IS A  +   +V  N
Sbjct: 32  SGPVFEEQPSSLIYPEGMPEGKVTLSCQARSSPAAVYRWRVNGTDISFAEESHYTQVAGN 91

Query: 181 RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLT 239
            +        D G+Y C A N  G +   V      +  +     +   TV +G    L 
Sbjct: 92  LVINNPQNGRDGGSYQCLAINRCGTIVSRVANLKFGYLHDFPPESRSPQTVHEGMGTFLA 151

Query: 240 CRVFGA-PKPEVNWIHNQ----KELTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKL 293
           C+     P     W  N+     +   GR+ + + TG+L + +    D+G Y CF    +
Sbjct: 152 CQPPAHYPALSYRWFINEFPNFIQPEAGRWFVSQVTGNLYLANARANDTGNYFCFTTINM 211

Query: 294 GTAQGS-GSLTVKEHTHITDQP-------------EDYEVEAGQSATFRCNAVSDPSLKL 339
             +  S  S  V+   H    P             E Y + +GQ+A   C A  +P  K 
Sbjct: 212 DVSTKSIFSKAVQLTVHPDASPRKTAPNIRVRFPAETYAL-SGQTAQLECFAYGNPIPK- 269

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS-GQYTCRAQTELDFIEAQATLTV 398
            I W +    +D    P+   S D  + +      D  G Y C           Q  ++V
Sbjct: 270 -IRWRK----VDGILPPKVGASVDGPILIIPELNFDDEGMYECEVYNSEGRETHQGRVSV 324

Query: 399 Q 399
           Q
Sbjct: 325 Q 325


>gi|291244142|ref|XP_002741959.1| PREDICTED: sidekick 2-like [Saccoglossus kowalevskii]
          Length = 2107

 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 166/614 (27%), Positives = 264/614 (42%), Gaps = 64/614 (10%)

Query: 51  VELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           V+L CI   TPL    T+W ++G+ I+ S           LI+ +    D+G Y CEVS 
Sbjct: 243 VQLECIASATPLDLKITLWKRNGMTISQS--------ANKLILFNPSSIDEGVYECEVS- 293

Query: 109 GVGEAKSYS-----IDLSVLAAPYFTVEPEFINAAE-EETVTFECKASGLPEPEIHWVHN 162
              +  SYS       +S+   P + + P  +   +  E +   CKASG+PEP   W  N
Sbjct: 294 --LQYHSYSSVRATATISMRTEPVWMLSPVAVTTGDVNEPIEIPCKASGVPEPMYKWYQN 351

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           G  +S    N    +    + I +L   D   + C A+N +  +    ++ V   AP IT
Sbjct: 352 GIDVSTLGNNRFIVLSTGSLQITSLHAEDQAMFQCFASNVVADISVSTWLQVERLAPNIT 411

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT----------------I 266
             P D   + G T  L C   G+P P+V W   + +   GR+                 +
Sbjct: 412 NPPNDTSVLAGSTARLHCGYSGSPAPDVIW--KKDDTVVGRWNGSGSGLGIIPVSSTINV 469

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
           +  GDL I+    ADSG YTC   N + +   S +LTV+  T I+D P+D EV  G +  
Sbjct: 470 MSNGDLIISTAKVADSGLYTCTVVNNVASVTASATLTVQVKTRISDPPKDMEVIKGSTGI 529

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           F+C  + D ++ + I+WL  +  ID  S  R     D SL +  +   D G YTC   + 
Sbjct: 530 FQCGVLHDSNVAVRILWLMNNVEIDLSSSNRISVLYDGSLKIAGARSDDIGNYTCTVTSP 589

Query: 387 LDFIEAQATLTV-QVPLEAPSNFTLIQVIDAKKAV-VSWNPVSPQSLRGHFRGYKVQTWT 444
                  A+L V ++P  AP     +  ID ++++ + W     +S  G+    + + + 
Sbjct: 590 GGNDARTASLVVIELPF-APQFLHAVLSIDQRRSIDLQWL----ESFDGNKAILRYKVFR 644

Query: 445 EKDGEGSIRELIVN--KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT--- 499
           +++ E     ++ N   G      +    P+ +    V A N    GP S+  + VT   
Sbjct: 645 KENAEIVWTLIMSNVAPGVENIVTIPDLTPSYQYAFAVSAVNELGEGPLSDPSNNVTLPV 704

Query: 500 --PEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLER 555
             P+  P   Q + A P  SS+  ++W  P Q   NG L GY+I+Y+ +KG    P   +
Sbjct: 705 EPPDAAP---QGVVASPRSSSSIRIQWQAPPQDKWNGPLTGYRIRYR-LKGYSSSPYSYQ 760

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEG 610
             Y  +P   S +L  L     Y I +A     G G  S  +       VP + P  V  
Sbjct: 761 DIY--NPQQQSYELTDLITWDTYEIQIAANNSMGPGVYSLVIIVRTLEGVPTEAPQVVVT 818

Query: 611 RGSTPNNLVISWTA 624
             ++  ++   W +
Sbjct: 819 HANSSTSIFFQWMS 832



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 172/718 (23%), Positives = 275/718 (38%), Gaps = 110/718 (15%)

Query: 67  WSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN---GVGEAKSYSIDLSV- 122
           W KD  PIN  + +   ++   L+I     S++G Y C   N   G G  +S +I+L V 
Sbjct: 159 WKKDNFPINGGNVVISLDH--KLVILSASESNEGQYHCSALNTVVGNGMRESPTINLYVN 216

Query: 123 -----LAAPYFTVEP-EFINAAEEETVTFECKASGLP-EPEIH-WVHNGKPISQAPPNPR 174
                   P   V P + +    + TV  EC AS  P + +I  W  NG  ISQ+     
Sbjct: 217 GNRPSSVGPRIIVPPKDTVFTQGDPTVQLECIASATPLDLKITLWKRNGMTISQSA---- 272

Query: 175 RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA-------PEITEAPKD 227
                N++ + N    D G Y C    SL Y     Y +V A A       P    +P  
Sbjct: 273 -----NKLILFNPSSIDEGVYECEV--SLQY---HSYSSVRATATISMRTEPVWMLSPVA 322

Query: 228 EYTVD-GKTVVLTCRVFGAPKPEVNWIHNQKE---LTGGRYTILETGDLKITDVAFADSG 283
             T D  + + + C+  G P+P   W  N  +   L   R+ +L TG L+IT +   D  
Sbjct: 323 VTTGDVNEPIEIPCKASGVPEPMYKWYQNGIDVSTLGNNRFIVLSTGSLQITSLHAEDQA 382

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHT-HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
            + CFA N +     S  L V+    +IT+ P D  V AG +A   C     P+    ++
Sbjct: 383 MFQCFASNVVADISVSTWLQVERLAPNITNPPNDTSVLAGSTARLHCGYSGSPAPD--VI 440

Query: 343 WLR-------------GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
           W +             G   I   S    + + D  L ++ +   DSG YTC     +  
Sbjct: 441 WKKDDTVVGRWNGSGSGLGIIPVSSTINVMSNGD--LIISTAKVADSGLYTCTVVNNVAS 498

Query: 390 IEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE 449
           + A ATLTVQV          ++VI     +     +   ++    R   +    E D  
Sbjct: 499 VTASATLTVQVKTRISDPPKDMEVIKGSTGIFQCGVLHDSNVA--VRILWLMNNVEIDLS 556

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQS 509
            S R  ++  G             S +         +  G  +   S V  E +P   Q 
Sbjct: 557 SSNRISVLYDGSLKIAGA-----RSDDIGNYTCTVTSPGGNDARTASLVVIE-LPFAPQF 610

Query: 510 LEAIPL--GSSAFYLKWVKPEQPNGVLMGYKIKYQ-------SVKGTKVGPLLERLPYIS 560
           L A+       +  L+W++    N  ++ YK+  +       ++  + V P +E +  I 
Sbjct: 611 LHAVLSIDQRRSIDLQWLESFDGNKAILRYKVFRKENAEIVWTLIMSNVAPGVENIVTIP 670

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDN-----VEGRGSTP 615
           D          L PS +Y   ++   + G+G         P  +P N     VE   + P
Sbjct: 671 D----------LTPSYQYAFAVSAVNELGEG---------PLSDPSNNVTLPVEPPDAAP 711

Query: 616 NNLV----------ISWTAMPEIEHNAPHFKYRIFWR-RHNTGEAWNQDDVLDWRQSELV 664
             +V          I W A P+ + N P   YRI +R +  +   ++  D+ + +Q    
Sbjct: 712 QGVVASPRSSSSIRIQWQAPPQDKWNGPLTGYRIRYRLKGYSSSPYSYQDIYNPQQQSYE 771

Query: 665 LANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAF 722
           L +  T+  YEI++    +   G  S+  +IV   E   TE  + V    N +  + F
Sbjct: 772 LTDLITWDTYEIQIAANNSMGPGVYSLV-IIVRTLEGVPTEAPQVVVTHANSSTSIFF 828



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 5/150 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSI---RELI 456
            +P  AP + + +  I   +  V+W      +  G  +GYK+  W   D   +I    +++
Sbjct: 1593 IPTAAPDDVSAVP-IGPTQIRVTWKEPPENTQNGGLQGYKIFYWKVSDEGDNIDNEHQMM 1651

Query: 457  VNKG-ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPL 515
               G E T   +D+ V  +    +VL FN A +GP S +I   T + +PGT   L    +
Sbjct: 1652 RPVGVELTEVLLDQLVSYTNYKIQVLGFNAAGDGPKSAVIRVRTDQTLPGTPGPLIFTKI 1711

Query: 516  GSSAFYLKWVKPEQPNGVLMGYKIKYQSVK 545
              +A  + W  P +PNG+++GY++ Y+ ++
Sbjct: 1712 TMNAVNVTWASPIKPNGIIIGYQVIYKPLE 1741



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 99/209 (47%), Gaps = 23/209 (11%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P  AP++ T ++        +SW P++ +   G   GY+V +W  K    ++ +  ++ G
Sbjct: 1110 PSTAPASVT-VRANSETSLTISWIPLTREQWNGVPLGYRV-SWRSKP---TVVKRSLSNG 1164

Query: 461  ESTTTEVDKFVPASKNF----------ARVLAFNGAYNGPPSEIISFVTPEGVPGT-VQS 509
               +  +D ++  +              +VLA+N   NGP S+II   T + VP    Q+
Sbjct: 1165 YFQSVNIDDYIGRTYVIEDLEEWMWYEVKVLAYNAKGNGPYSDIIEERTGDSVPSAGPQN 1224

Query: 510  LEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKY-QSVKGTKVGPLLERLPYISDPTTTS 566
            + A+  GS+   + WV   Q   NG ++GYK+ Y +S          +    I+D ++ S
Sbjct: 1225 VVAVSTGSTTIDIAWVDIPQSDQNGEILGYKVLYCESFADVDSCEYYD----ITDNSSRS 1280

Query: 567  AKLAGLEPSTKYRIHLAGYTKAGDGAESK 595
             +L+ L+    Y I + GYT+ G+G  S+
Sbjct: 1281 TRLSNLKKYVTYDIQVLGYTRIGNGVLSE 1309



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 12/196 (6%)

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
           VP EAP    +     +      W   SPQ + G  +GYK++ W   + +  + +++   
Sbjct: 808 VPTEAP-QVVVTHANSSTSIFFQWMSPSPQKIFGVNQGYKLKAWEPSNPDYKVVKVVPPN 866

Query: 460 GESTTTEVDKFVPASKNFA----RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPL 515
            + +  E   ++   K F      VL +  A +GP S+ +   T + VPG V  L    +
Sbjct: 867 PQYSLQE--NYITGLKKFTVYLTSVLCYTRAGDGPESDELQVETFQDVPGPVGDLRFFDI 924

Query: 516 GSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
              +  + W +PE+ NG+L+GY + +Q      +    +     SD  T    + GL   
Sbjct: 925 YDDSLKVDWTEPEEINGILIGYTVGWQEY---NISSTYQSEEISSD--TVVYTVTGLTQL 979

Query: 576 TKYRIHLAGYTKAGDG 591
           T Y I ++  T+ G G
Sbjct: 980 TTYEIMVSASTQMGAG 995



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 99/278 (35%), Gaps = 35/278 (12%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKD------------GVPINPSDRISQGNYGKSLIIK 92
            L      L C + G+P P  IW KD            G+ I P            LII 
Sbjct: 419 VLAGSTARLHCGYSGSPAPDVIWKKDDTVVGRWNGSGSGLGIIPVSSTINVMSNGDLIIS 478

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--S 150
             + +D G YTC V N V    + S  L+V      +  P+ +   +  T  F+C     
Sbjct: 479 TAKVADSGLYTCTVVNNVASVTA-SATLTVQVKTRISDPPKDMEVIKGSTGIFQCGVLHD 537

Query: 151 GLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDV 210
                 I W+ N   I  +  N    +    + I   R  D GNY C  T+  G   +  
Sbjct: 538 SNVAVRILWLMNNVEIDLSSSNRISVLYDGSLKIAGARSDDIGNYTCTVTSPGGNDARTA 597

Query: 211 YVNV--LAHAPEITEA--PKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIHNQK 257
            + V  L  AP+   A    D+          + DG   +L  +VF     E+ W     
Sbjct: 598 SLVVIELPFAPQFLHAVLSIDQRRSIDLQWLESFDGNKAILRYKVFRKENAEIVWTLIMS 657

Query: 258 ELTGGRYTILETGDLKIT-DVAFADSGEYTCFARNKLG 294
            +  G   I+   DL  +   AFA S      A N+LG
Sbjct: 658 NVAPGVENIVTIPDLTPSYQYAFAVS------AVNELG 689



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 70/175 (40%), Gaps = 11/175 (6%)

Query: 213 NVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDL 272
           N +   P I + P+D    +     LTC   G+P  +  W      ++            
Sbjct: 29  NAVLVPPNIYQQPQDRLIAESGAATLTCTASGSPPIKYQWKKGSSYVSQPSPVSYH---- 84

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLT-VKEHTHITDQPEDYEVEAGQSATFRC-- 329
            + +V   DSGEY C   N +G+   S ++  V         P  + V AG S    C  
Sbjct: 85  PLNNVDTFDSGEYYCVVSNPVGSVISSAAVVQVAYIREYQGGPTTFSVNAGYSIELECPQ 144

Query: 330 -NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            + + D S    + W + + PI+  +    V S D+ L +  +SE + GQY C A
Sbjct: 145 LDTLPDSSPDFHLTWKKDNFPINGGN---VVISLDHKLVILSASESNEGQYHCSA 196



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 109/301 (36%), Gaps = 35/301 (11%)

Query: 121 SVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN 180
           +VL  P    +P+    AE    T  C ASG P  +  W      +SQ  P         
Sbjct: 30  AVLVPPNIYQQPQDRLIAESGAATLTCTASGSPPIKYQWKKGSSYVSQPSPVSYHP---- 85

Query: 181 RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC 240
              + N+   D+G Y C  +N +G V     V  +A+  E    P       G ++ L C
Sbjct: 86  ---LNNVDTFDSGEYYCVVSNPVGSVISSAAVVQVAYIREYQGGPTTFSVNAGYSIELEC 142

Query: 241 RVF-----GAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGT 295
                    +P   + W  +   + GG   I     L I   + ++ G+Y C A N +  
Sbjct: 143 PQLDTLPDSSPDFHLTWKKDNFPINGGNVVISLDHKLVILSASESNEGQYHCSALNTVVG 202

Query: 296 AQGSGSLTVKEHTH----------ITDQPEDYEVEAGQ-SATFRCNAVSDP-SLKLSIVW 343
                S T+  + +          I   P+D     G  +    C A + P  LK+++ W
Sbjct: 203 NGMRESPTINLYVNGNRPSSVGPRIIVPPKDTVFTQGDPTVQLECIASATPLDLKITL-W 261

Query: 344 LRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL-DFIEAQATLTVQVPL 402
            R    I         QS +  L +   S +D G Y C    +   +   +AT T+ +  
Sbjct: 262 KRNGMTIS--------QSAN-KLILFNPSSIDEGVYECEVSLQYHSYSSVRATATISMRT 312

Query: 403 E 403
           E
Sbjct: 313 E 313



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 132/339 (38%), Gaps = 68/339 (20%)

Query: 378  QYTCRAQTELDFIEAQATLTVQVPLEAP--SNFTLI---QVIDAKKAVVSWNPVSPQSLR 432
            ++T  A T L + E    L + V    P  S F LI   Q++ ++   + W+        
Sbjct: 1392 EFTISAATRLGWGEPAVALVLTVNNRDPPQSPFGLIVDRQLVFSRSIALLWS-------- 1443

Query: 433  GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN---GAYNG 489
               RG         DG   IR   +           +  P S    RV A N    +Y  
Sbjct: 1444 ---RG--------SDGNSPIRYFTI-----------QLSPYSTYQFRVQAHNDVGASYYS 1481

Query: 490  PPSEIISFVT--PEGVPGTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVK 545
             PSE I+ +   PE  P      + IP  +++  + W  P  E  NG+L G+KI+Y+   
Sbjct: 1482 IPSEPITTLQDFPEDSPTIT---DVIPYTATSLRVIWRPPASEDINGILNGFKIQYK--- 1535

Query: 546  GTKVGPLLERLPY----ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-YLFYV 600
                  +L ++ Y    ISD       L  L     Y I +  +   G+G  S  Y  YV
Sbjct: 1536 ------ILRQISYMEHVISDTRLRQFDLTDLSIYENYEIVMRVFNIIGEGPPSAPYTIYV 1589

Query: 601  ----PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF-WRRHNTGEAWNQDDV 655
                P   PD+V      P  + ++W   PE   N     Y+IF W+  + G+  + +  
Sbjct: 1590 GEAIPTAAPDDVSAVPIGPTQIRVTWKEPPENTQNGGLQGYKIFYWKVSDEGDNIDNEHQ 1649

Query: 656  L----DWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGS 690
            +        +E++L    ++  Y+I+V+      DG  S
Sbjct: 1650 MMRPVGVELTEVLLDQLVSYTNYKIQVLGFNAAGDGPKS 1688



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 73/342 (21%), Positives = 137/342 (40%), Gaps = 29/342 (8%)

Query: 359  VQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQATLTVQVPLEAPSN--FTLIQVID 415
            + S+    TVT  ++L + +    A T++       +T++  VP E P+N    +I  + 
Sbjct: 964  ISSDTVVYTVTGLTQLTTYEIMVSASTQMGAGPTVVSTISSGVPPELPTNPVNVVISNVQ 1023

Query: 416  AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVN----KGESTTTEVDKFV 471
            A+   + + P       G+     + TW  +       + + +      ++    V   +
Sbjct: 1024 ARSVNIQFTP-------GYNGKTSINTWKVEAQINGAEQWVTHYEHHDPDALGFVVPDLL 1076

Query: 472  PASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPGTVQSLEAIPLGS-SAFYLKWV--KP 527
            P +K   RV A N      PS+  S F T +  P T  +   +   S ++  + W+    
Sbjct: 1077 PYTKYILRVTAINVVGASHPSDPTSEFETLQDYPSTAPASVTVRANSETSLTISWIPLTR 1136

Query: 528  EQPNGVLMGYKIKYQSVKGTKVGPLLERLPY----ISDPTTTSAKLAGLEPSTKYRIHLA 583
            EQ NGV +GY++ ++S K T V   L    +    I D    +  +  LE    Y + + 
Sbjct: 1137 EQWNGVPLGYRVSWRS-KPTVVKRSLSNGYFQSVNIDDYIGRTYVIEDLEEWMWYEVKVL 1195

Query: 584  GYTKAGDGAESKYL-----FYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
             Y   G+G  S  +       VP   P NV    +    + I+W  +P+ + N     Y+
Sbjct: 1196 AYNAKGNGPYSDIIEERTGDSVPSAGPQNVVAVSTGSTTIDIAWVDIPQSDQNGEILGYK 1255

Query: 639  IFW-RRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVV 679
            + +       ++    D+ D       L+N   +  Y+I+V+
Sbjct: 1256 VLYCESFADVDSCEYYDITDNSSRSTRLSNLKKYVTYDIQVL 1297



 Score = 39.3 bits (90), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 72/328 (21%), Positives = 120/328 (36%), Gaps = 58/328 (17%)

Query: 32  APKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLII 91
            P   Y   +  +   +    L C   G+P  +  W K       S  +SQ +      +
Sbjct: 33  VPPNIYQQPQDRLIAESGAATLTCTASGSPPIKYQWKKG------SSYVSQPSPVSYHPL 86

Query: 92  KHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC-KAS 150
            +V+  D G Y C VSN VG   S +  + V     +   P   +     ++  EC +  
Sbjct: 87  NNVDTFDSGEYYCVVSNPVGSVISSAAVVQVAYIREYQGGPTTFSVNAGYSIELECPQLD 146

Query: 151 GLPE--PEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS-LGY 205
            LP+  P+ H  W  +  PI+    N    +  +++ I +  +S+ G Y C+A N+ +G 
Sbjct: 147 TLPDSSPDFHLTWKKDNFPINGG--NVVISLD-HKLVILSASESNEGQYHCSALNTVVGN 203

Query: 206 VYKD-----VYVN---VLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQ 256
             ++     +YVN     +  P I   PKD     G  TV L C     P          
Sbjct: 204 GMRESPTINLYVNGNRPSSVGPRIIVPPKDTVFTQGDPTVQLECIASATPL--------- 254

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
                         DLKI           T + RN +  +Q +  L +   + I +   +
Sbjct: 255 --------------DLKI-----------TLWKRNGMTISQSANKLILFNPSSIDEGVYE 289

Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIVWL 344
            EV     +     A +  S++   VW+
Sbjct: 290 CEVSLQYHSYSSVRATATISMRTEPVWM 317


>gi|119584281|gb|EAW63877.1| contactin 4, isoform CRA_e [Homo sapiens]
          Length = 807

 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 191/727 (26%), Positives = 295/727 (40%), Gaps = 112/727 (15%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P  IW + DG PI    R  + N    L I + +  D G Y C   N 
Sbjct: 24  VKLECFALGNPVPTIIWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGLYECVAENS 81

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P +  +   I+ A EE V +ECKA+G P+P   W+ NG+P+   
Sbjct: 82  RGKNVARG-QLTFYAQPNWIQKINDIHVAMEENVFWECKANGRPKPTYKWLKNGEPLLT- 139

Query: 170 PPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
               R ++    G   ITI NL  SD G Y C A N  G ++ +  ++V+A  P+ +   
Sbjct: 140 ----RDRIQIEQGTLNITIVNL--SDAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTL 193

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADS 282
               T+   G  VV+ C+   +PKP   W   +  L    R TI E G+L+I +V  +D+
Sbjct: 194 LKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDA 253

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   
Sbjct: 254 GSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFT 313

Query: 343 WLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           W      IDF+ +         Q +   L +       +G+Y C  QT +D + A A L 
Sbjct: 314 WSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLI 373

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGE 449
           V+ P   P   T+ ++ D   A +SW P     SP ++      Y +Q  T         
Sbjct: 374 VRGPPGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFSVGWQAV 426

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTP 500
            ++ ELI   G++ T  V    P  +   R +A N    G PS         E +  VTP
Sbjct: 427 STVPELI--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTP 484

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
             V G   S        S   + W  V  E  NG   GY + ++       G ++  L  
Sbjct: 485 ANVSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFRP-----YGKMIWMLTV 532

Query: 559 I--SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGR 611
           +  +D +    +   + P + + + +  +   G+G  S           P K P ++  R
Sbjct: 533 LASADASRYVFRNESVHPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFAR 592

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
             +  ++ + W +  E                                       N+   
Sbjct: 593 SLSATDIEVFWASPLE--------------------------------------KNRGRI 614

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
           Q YE+K    W  +D E + R+ I   G  T+T++     +      V A+N A  GP S
Sbjct: 615 QGYEVKY---WRHEDKEENARK-IRTVGNQTSTKITNLKGSVLYHLAVKAYNSAGTGPSS 670

Query: 732 EIISFVT 738
             ++  T
Sbjct: 671 ATVNVTT 677



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 145/584 (24%), Positives = 218/584 (37%), Gaps = 75/584 (12%)

Query: 132 PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKS 190
           PE +  A+  TV  EC A G P P I W   +GKPI++     RR      + I N ++ 
Sbjct: 13  PETVPTAKGATVKLECFALGNPVPTIIWRRADGKPIAR---KARRHKSNGILEIPNFQQE 69

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A NS G       +   A  P   +   D +    + V   C+  G PKP  
Sbjct: 70  DAGLYECVAENSRGKNVARGQLTFYAQ-PNWIQKINDIHVAMEENVFWECKANGRPKPTY 128

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N + L       +E G L IT V  +D+G Y C A NK G    +  L+V     I
Sbjct: 129 KWLKNGEPLLTRDRIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSV-----I 183

Query: 311 TDQPEDYE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
              P+           V+ G      C   + P  K    W +G + I  E+E R   S 
Sbjct: 184 AVGPDFSRTLLKRVTLVKVGGEVVIECKPKASP--KPVYTWKKGRD-ILKENE-RITISE 239

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVS 422
           D +L +   ++ D+G YTC A        +   L V+ P       + + V   +  V+ 
Sbjct: 240 DGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLP 299

Query: 423 WNPVSPQSL----RGHFRGYKVQTWTEKD------GEGSIRELIVNKGE---------ST 463
                  SL       F G+ +    + D      G+ S  +L++   +           
Sbjct: 300 CQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMV 359

Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYL 522
            T VD+   A+    R         GPP    +    E    T Q S    P   S   +
Sbjct: 360 QTSVDRLSAAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITM 410

Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
             ++   P      + + +Q+V           +P + D  T +A + GL P  +Y    
Sbjct: 411 YVIQARTP------FSVGWQAVS---------TVPELIDGKTFTATVVGLNPWVEYEFRT 455

Query: 583 AGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
                 G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F 
Sbjct: 456 VAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFG 515

Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
           Y + +R +     W    +     S  V  N+    F P+E+KV
Sbjct: 516 YVVAFRPYGK-MIWMLTVLASADASRYVFRNESVHPFSPFEVKV 558



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 21/192 (10%)

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
           RG  +GY+V+ W  +D E + R+ I   G  T+T++     +      V A+N A  GP 
Sbjct: 611 RGRIQGYEVKYWRHEDKEENARK-IRTVGNQTSTKITNLKGSVLYHLAVKAYNSAGTGPS 669

Query: 492 SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
           S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 670 SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNR 725

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
            +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P  + 
Sbjct: 726 QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIPKISN 775

Query: 606 DNVEGRGSTPNN 617
               G G++ +N
Sbjct: 776 AYARGSGASTSN 787


>gi|193783587|dbj|BAG53498.1| unnamed protein product [Homo sapiens]
          Length = 807

 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 191/727 (26%), Positives = 295/727 (40%), Gaps = 112/727 (15%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P  IW + DG PI    R  + N    L I + +  D G Y C   N 
Sbjct: 24  VKLECFALGNPVPTIIWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGLYECVAENS 81

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P +  +   I+ A EE V +ECKA+G P+P   W+ NG+P+   
Sbjct: 82  RGKNVARG-QLTFYAQPNWIQKINDIHVAMEENVFWECKANGRPKPTYKWLKNGEPLLT- 139

Query: 170 PPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
               R ++    G   ITI NL  SD G Y C A N  G ++ +  ++V+A  P+ +   
Sbjct: 140 ----RDRIQIEQGTLNITIVNL--SDAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTL 193

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADS 282
               T+   G  VV+ C+   +PKP   W   +  L    R TI E G+L+I +V  +D+
Sbjct: 194 LRRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDA 253

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   
Sbjct: 254 GSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFT 313

Query: 343 WLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           W      IDF+ +         Q +   L +       +G+Y C  QT +D + A A L 
Sbjct: 314 WSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLI 373

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGE 449
           V+ P   P   T+ ++ D   A +SW P     SP ++      Y +Q  T         
Sbjct: 374 VRGPPGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFSVGWQAV 426

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTP 500
            ++ ELI   G++ T  V    P  +   R +A N    G PS         E +  VTP
Sbjct: 427 STVPELI--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTP 484

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
             V G   S        S   + W  V  E  NG   GY + ++       G ++  L  
Sbjct: 485 ANVSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFR-----PYGKMIWMLTV 532

Query: 559 I--SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGR 611
           +  +D +    +   + P + + + +  +   G+G  S           P K P ++  R
Sbjct: 533 LASADASRYVFRNESVHPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFAR 592

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
             +  ++ + W +  E                                       N+   
Sbjct: 593 SLSATDIEVFWASPLE--------------------------------------KNRGRI 614

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
           Q YE+K    W  +D E + R+ I   G  T+T++     +      V A+N A  GP S
Sbjct: 615 QGYEVKY---WRHEDKEENARK-IRTVGNQTSTKITNLRGSVLYHLAVKAYNSAGTGPSS 670

Query: 732 EIISFVT 738
             ++  T
Sbjct: 671 ATVNVTT 677



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 145/584 (24%), Positives = 218/584 (37%), Gaps = 75/584 (12%)

Query: 132 PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKS 190
           PE +  A+  TV  EC A G P P I W   +GKPI++     RR      + I N ++ 
Sbjct: 13  PETVPTAKGATVKLECFALGNPVPTIIWRRADGKPIAR---KARRHKSNGILEIPNFQQE 69

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A NS G       +   A  P   +   D +    + V   C+  G PKP  
Sbjct: 70  DAGLYECVAENSRGKNVARGQLTFYAQ-PNWIQKINDIHVAMEENVFWECKANGRPKPTY 128

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N + L       +E G L IT V  +D+G Y C A NK G    +  L+V     I
Sbjct: 129 KWLKNGEPLLTRDRIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSV-----I 183

Query: 311 TDQPEDYE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
              P+           V+ G      C   + P  K    W +G + I  E+E R   S 
Sbjct: 184 AVGPDFSRTLLRRVTLVKVGGEVVIECKPKASP--KPVYTWKKGRD-ILKENE-RITISE 239

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVS 422
           D +L +   ++ D+G YTC A        +   L V+ P       + + V   +  V+ 
Sbjct: 240 DGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLP 299

Query: 423 WNPVSPQSL----RGHFRGYKVQTWTEKD------GEGSIRELIVNKGE---------ST 463
                  SL       F G+ +    + D      G+ S  +L++   +           
Sbjct: 300 CQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMV 359

Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYL 522
            T VD+   A+    R         GPP    +    E    T Q S    P   S   +
Sbjct: 360 QTSVDRLSAAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITM 410

Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
             ++   P      + + +Q+V           +P + D  T +A + GL P  +Y    
Sbjct: 411 YVIQARTP------FSVGWQAVS---------TVPELIDGKTFTATVVGLNPWVEYEFRT 455

Query: 583 AGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
                 G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F 
Sbjct: 456 VAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFG 515

Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
           Y + +R +     W    +     S  V  N+    F P+E+KV
Sbjct: 516 YVVAFRPYGK-MIWMLTVLASADASRYVFRNESVHPFSPFEVKV 558



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 21/192 (10%)

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
           RG  +GY+V+ W  +D E + R+ I   G  T+T++     +      V A+N A  GP 
Sbjct: 611 RGRIQGYEVKYWRHEDKEENARK-IRTVGNQTSTKITNLRGSVLYHLAVKAYNSAGTGPS 669

Query: 492 SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
           S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 670 SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNR 725

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
            +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P  + 
Sbjct: 726 QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIPKISN 775

Query: 606 DNVEGRGSTPNN 617
               G G++ +N
Sbjct: 776 AYARGSGASTSN 787


>gi|226955344|gb|ACO95339.1| L1 cell adhesion molecule isoform 2 precursor (predicted) [Dasypus
           novemcinctus]
          Length = 1039

 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 207/452 (45%), Gaps = 15/452 (3%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDL 120
           P P   W +   P+ P+DR++  N+ K+L + +V   D G Y C   N +G  + ++  +
Sbjct: 56  PTPTIKWLRPSGPM-PADRVTYQNHNKTLQLVNVGEEDDGEYRCLAENSLGTTQ-HTYYI 113

Query: 121 SVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN 180
           +V AAPY+  +PE       ET   +C+A G P+PE+ W  NG P+++   + + ++   
Sbjct: 114 TVEAAPYWLHQPESHLYGPGETARLDCQAQGRPQPEVSWRINGIPVTELTSDQKFRIQRG 173

Query: 181 RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLT 239
            + + N++ +DT    C A N  G +  + Y+ V+    +I       Y  V+G T  L 
Sbjct: 174 SLILSNVQPADTMVTQCEARNRHGLLLANAYIYVVQLPTKILTPDNQTYMVVEGSTAHLL 233

Query: 240 CRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQ 297
           C+ FGAP P V W++ + E  L   R+     G L I ++   D+G Y C A N      
Sbjct: 234 CKAFGAPVPSVQWLNEKGETVLQDERFFPHANGTLGIRELQANDTGRYFCQATNDQNNVT 293

Query: 298 GSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID--FESE 355
               L VK+ T IT  P+    + G + TF C A  DPSL+ SI W      +    +S+
Sbjct: 294 IMAVLQVKDATQITQGPQRAVKKKGSNVTFTCQASFDPSLQHSITWRANGHDLQELGDSD 353

Query: 356 PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA-TLTVQVPLEAPS-NFTLIQV 413
             F++  D  L +      D G Y+C A T+LD +E++A  L V  P   P    +   +
Sbjct: 354 KYFIE--DGRLVINSLDYSDQGNYSCVAGTQLDVVESRAELLVVGSPGPVPQLELSDHHL 411

Query: 414 IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPA 473
           ++  +  +SW P   +        Y ++   ++   G    L    G  T+  + K  P 
Sbjct: 412 LEQSQVRLSWRPA--EDHNAPIEKYNIEFEDKEMARGKWHSLGNVPGNQTSATL-KLSPY 468

Query: 474 SKNFARVLAFNGAYNGPPSEII-SFVTPEGVP 504
                RV A N    G PS    + VTPE  P
Sbjct: 469 VHYTFRVTAINKCGPGEPSLTSETVVTPEAAP 500



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 147/550 (26%), Positives = 224/550 (40%), Gaps = 55/550 (10%)

Query: 153 PEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--NLRKSDTGNYGCNATNSLGYVYKDV 210
           P P I W+    P+    P  R     +  T++  N+ + D G Y C A NSLG      
Sbjct: 56  PTPTIKWLRPSGPM----PADRVTYQNHNKTLQLVNVGEEDDGEYRCLAENSLGTTQHTY 111

Query: 211 YVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTIL 267
           Y+ V A AP     P+      G+T  L C+  G P+PEV+W  N     ELT  +   +
Sbjct: 112 YITVEA-APYWLHQPESHLYGPGETARLDCQAQGRPQPEVSWRINGIPVTELTSDQKFRI 170

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSA 325
           + G L +++V  AD+    C ARN+ G    +  + V +     +T   + Y V  G +A
Sbjct: 171 QRGSLILSNVQPADTMVTQCEARNRHGLLLANAYIYVVQLPTKILTPDNQTYMVVEGSTA 230

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
              C A   P    S+ WL        + E RF    + +L + +    D+G+Y C+A  
Sbjct: 231 HLLCKAFGAPVP--SVQWLNEKGETVLQDE-RFFPHANGTLGIRELQANDTGRYFCQATN 287

Query: 386 ELDFIEAQATLTV-------QVPLEA----PSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
           + + +   A L V       Q P  A     SN T            S++P    S+   
Sbjct: 288 DQNNVTIMAVLQVKDATQITQGPQRAVKKKGSNVTFT-------CQASFDPSLQHSITWR 340

Query: 435 FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
             G+ +Q   + D      +  +  G      +D       N++ V           +E+
Sbjct: 341 ANGHDLQELGDSD------KYFIEDGRLVINSLD--YSDQGNYSCVAGTQLDVVESRAEL 392

Query: 495 ISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLE 554
           +   +P  VP    S   + L  S   L W   E  N  +  Y I+++  K    G    
Sbjct: 393 LVVGSPGPVPQLELSDHHL-LEQSQVRLSWRPAEDHNAPIEKYNIEFED-KEMARGKWHS 450

Query: 555 RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV------PFKNPDNV 608
                 + T+ + KL+   P   Y   +    K G G  S     V      P KNP +V
Sbjct: 451 LGNVPGNQTSATLKLS---PYVHYTFRVTAINKCGPGEPSLTSETVVTPEAAPEKNPKDV 507

Query: 609 EGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQ 668
           +G G+  +N+VI+W  +  ++ NAP  +YR+ WRR      W +  V D     LV+AN 
Sbjct: 508 KGEGNETHNMVITWQPLGWMDWNAPQVQYRVQWRRQGARGTWQEQIVSD---PPLVVANT 564

Query: 669 PTFQPYEIKV 678
            TF PYEIKV
Sbjct: 565 STFVPYEIKV 574



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 151/588 (25%), Positives = 242/588 (41%), Gaps = 62/588 (10%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIW-SKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           + +      L C   G P+P   W ++ G  +   +R      G +L I+ ++ +D G Y
Sbjct: 223 MVVEGSTAHLLCKAFGAPVPSVQWLNEKGETVLQDERFFPHANG-TLGIRELQANDTGRY 281

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP--EPEIHWV 160
            C+ +N        ++ L V  A   T  P+     +   VTF C+AS  P  +  I W 
Sbjct: 282 FCQATNDQNNVTIMAV-LQVKDATQITQGPQRAVKKKGSNVTFTCQASFDPSLQHSITWR 340

Query: 161 HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
            NG  + +   + +  +   R+ I +L  SD GNY C A   L  V     + V+     
Sbjct: 341 ANGHDLQELGDSDKYFIEDGRLVINSLDYSDQGNYSCVAGTQLDVVESRAELLVVGSPGP 400

Query: 221 ITEAP-KDEYTVDGKTVVLTCRV---FGAPKPEVNWIHNQKELTGGRYTILET--GDLKI 274
           + +    D + ++   V L+ R      AP  + N     KE+  G++  L    G+   
Sbjct: 401 VPQLELSDHHLLEQSQVRLSWRPAEDHNAPIEKYNIEFEDKEMARGKWHSLGNVPGNQTS 460

Query: 275 TDVAFADSGEYT--CFARNKLGTAQGSGSLT----VKEHTHITDQPEDYEVEAGQS---- 324
             +  +    YT    A NK G   G  SLT    V         P+D + E  ++    
Sbjct: 461 ATLKLSPYVHYTFRVTAINKCGP--GEPSLTSETVVTPEAAPEKNPKDVKGEGNETHNMV 518

Query: 325 ATFRCNAVSD---PSLKLSIVW----LRGSEPIDFESEPRFVQSND-----YSLTVTKSS 372
            T++     D   P ++  + W     RG+      S+P  V +N      Y + V   +
Sbjct: 519 ITWQPLGWMDWNAPQVQYRVQWRRQGARGTWQEQIVSDPPLVVANTSTFVPYEIKVQAVN 578

Query: 373 ELDSGQ--YTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQS 430
               G   +     +  DF +A   L              I+++++   +V W PV P  
Sbjct: 579 SQGKGPEPHVTIGYSGEDFPQASPQLEG------------IEILNSSTVLVKWWPVDPAQ 626

Query: 431 LRGHFRGYKVQTWT----EKDGEGSI-RELIVNKGESTTTEVDKFVPASKNFARVLAFNG 485
           ++GH RGY V  W     +K  +  I R  +V   ++T+  +    P S     V AFNG
Sbjct: 627 VKGHLRGYNVTYWRTGNPKKHSKRHIHRAHVVVPSDATSVTLGGLRPYSAYHVEVRAFNG 686

Query: 486 AYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSV- 544
              GP S++ +F TPEGVPG  ++L       ++  L+W  P   NGVL GY + Y ++ 
Sbjct: 687 RGAGPASDM-TFSTPEGVPGHPEALHLECQSDTSLLLRWQPPLSHNGVLTGYVLSYHALD 745

Query: 545 KGTKVGPLLERLPY-ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           +G K     E+L + + DP   +  L  L P  +YR  L   TK G G
Sbjct: 746 EGGK-----EQLSFDLPDPELRTHNLTNLSPRLRYRFQLQATTKEGPG 788



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 116/270 (42%), Gaps = 27/270 (10%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINP--SD---RISQGNYGKSLIIKHVEFSDQGSYTCE 105
             L C   G P P+  W  +G+P+    SD   RI +G    SLI+ +V+ +D     CE
Sbjct: 136 ARLDCQAQGRPQPEVSWRINGIPVTELTSDQKFRIQRG----SLILSNVQPADTMVTQCE 191

Query: 106 VSN--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVH-N 162
             N  G+  A +Y I +  L     T + +     E  T    CKA G P P + W++  
Sbjct: 192 ARNRHGLLLANAY-IYVVQLPTKILTPDNQTYMVVEGSTAHLLCKAFGAPVPSVQWLNEK 250

Query: 163 GKPISQAP---PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
           G+ + Q     P+    +G     I  L+ +DTG Y C ATN    V     + V   A 
Sbjct: 251 GETVLQDERFFPHANGTLG-----IRELQANDTGRYFCQATNDQNNVTIMAVLQV-KDAT 304

Query: 220 EITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWI---HNQKELTGGRYTILETGDLKI 274
           +IT+ P+      G  V  TC+    P  +  + W    H+ +EL       +E G L I
Sbjct: 305 QITQGPQRAVKKKGSNVTFTCQASFDPSLQHSITWRANGHDLQELGDSDKYFIEDGRLVI 364

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTV 304
             + ++D G Y+C A  +L   +    L V
Sbjct: 365 NSLDYSDQGNYSCVAGTQLDVVESRAELLV 394


>gi|28373122|ref|NP_783200.1| contactin-4 isoform a precursor [Homo sapiens]
 gi|332688245|ref|NP_001193884.1| contactin-4 isoform a precursor [Homo sapiens]
 gi|55976529|sp|Q8IWV2.1|CNTN4_HUMAN RecName: Full=Contactin-4; AltName: Full=Brain-derived
           immunoglobulin superfamily protein 2; Short=BIG-2;
           Flags: Precursor
 gi|26891535|gb|AAM00025.1| contactin 4 [Homo sapiens]
 gi|29837411|gb|AAP05786.1| BIG-2 [Homo sapiens]
 gi|119584279|gb|EAW63875.1| contactin 4, isoform CRA_c [Homo sapiens]
 gi|119584282|gb|EAW63878.1| contactin 4, isoform CRA_c [Homo sapiens]
          Length = 1026

 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 191/727 (26%), Positives = 295/727 (40%), Gaps = 112/727 (15%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P  IW + DG PI    R  + N    L I + +  D G Y C   N 
Sbjct: 243 VKLECFALGNPVPTIIWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGLYECVAENS 300

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P +  +   I+ A EE V +ECKA+G P+P   W+ NG+P+   
Sbjct: 301 RGKNVARG-QLTFYAQPNWIQKINDIHVAMEENVFWECKANGRPKPTYKWLKNGEPLLT- 358

Query: 170 PPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
               R ++    G   ITI NL  SD G Y C A N  G ++ +  ++V+A  P+ +   
Sbjct: 359 ----RDRIQIEQGTLNITIVNL--SDAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTL 412

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADS 282
               T+   G  VV+ C+   +PKP   W   +  L    R TI E G+L+I +V  +D+
Sbjct: 413 LKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDA 472

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   
Sbjct: 473 GSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFT 532

Query: 343 WLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           W      IDF+ +         Q +   L +       +G+Y C  QT +D + A A L 
Sbjct: 533 WSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLI 592

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGE 449
           V+ P   P   T+ ++ D   A +SW P     SP ++      Y +Q  T         
Sbjct: 593 VRGPPGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFSVGWQAV 645

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTP 500
            ++ ELI   G++ T  V    P  +   R +A N    G PS         E +  VTP
Sbjct: 646 STVPELI--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTP 703

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
             V G   S        S   + W  V  E  NG   GY + ++       G ++  L  
Sbjct: 704 ANVSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFR-----PYGKMIWMLTV 751

Query: 559 I--SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGR 611
           +  +D +    +   + P + + + +  +   G+G  S           P K P ++  R
Sbjct: 752 LASADASRYVFRNESVHPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFAR 811

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
             +  ++ + W +  E                                       N+   
Sbjct: 812 SLSATDIEVFWASPLE--------------------------------------KNRGRI 833

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
           Q YE+K    W  +D E + R+ I   G  T+T++     +      V A+N A  GP S
Sbjct: 834 QGYEVKY---WRHEDKEENARK-IRTVGNQTSTKITNLKGSVLYHLAVKAYNSAGTGPSS 889

Query: 732 EIISFVT 738
             ++  T
Sbjct: 890 ATVNVTT 896



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 161/638 (25%), Positives = 240/638 (37%), Gaps = 85/638 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V+ PE +  
Sbjct: 178 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPT 237

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   +GKPI++     RR      + I N ++ D G Y 
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIAR---KARRHKSNGILEIPNFQQEDAGLYE 294

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P   +   D +    + V   C+  G PKP   W+ N 
Sbjct: 295 CVAENSRGKNVARGQLTFYAQ-PNWIQKINDIHVAMEENVFWECKANGRPKPTYKWLKNG 353

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           + L       +E G L IT V  +D+G Y C A NK G    +  L+V     I   P+ 
Sbjct: 354 EPLLTRDRIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSV-----IAVGPDF 408

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  K    W +G + I  E+E R   S D +L +
Sbjct: 409 SRTLLKRVTLVKVGGEVVIECKPKASP--KPVYTWKKGRD-ILKENE-RITISEDGNLRI 464

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
              ++ D+G YTC A        +   L V+ P       + + V   +  V+       
Sbjct: 465 INVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHD 524

Query: 429 QSL----RGHFRGYKVQTWTEKD------GEGSIRELIVNKGE---------STTTEVDK 469
            SL       F G+ +    + D      G+ S  +L++   +            T VD+
Sbjct: 525 HSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDR 584

Query: 470 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPE 528
              A+    R         GPP    +    E    T Q S    P   S   +  ++  
Sbjct: 585 LSAAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQAR 635

Query: 529 QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
            P      + + +Q+V           +P + D  T +A + GL P  +Y          
Sbjct: 636 TP------FSVGWQAV---------STVPELIDGKTFTATVVGLNPWVEYEFRTVAANVI 680

Query: 589 GDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F Y + +R
Sbjct: 681 GIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFR 740

Query: 643 RHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
            +     W    +     S  V  N+    F P+E+KV
Sbjct: 741 PYGK-MIWMLTVLASADASRYVFRNESVHPFSPFEVKV 777



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 143/369 (38%), Gaps = 30/369 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  ++            SL+I +  +  D G+Y C  +
Sbjct: 44  KKVKLNCEVKGNPKPHIRWKLNGTDVDTGMDFRYSVVEGSLLINNPNKTQDAGTYQCTAT 103

Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVHN 162
           N  G   S    L       F T     ++    + +   C   G P    E    W+ N
Sbjct: 104 NSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMVLLC---GPPPHSGELSYAWIFN 160

Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN- 213
             P  Q   + RR V      + I  + KSD GNY C  TN+      LG     +  N 
Sbjct: 161 EYPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRND 217

Query: 214 --VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILET 269
             +  + P+I  + P+   T  G TV L C   G P P + W   + K +          
Sbjct: 218 GVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHKSN 277

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I +    D+G Y C A N  G     G LT     +   +  D  V   ++  + C
Sbjct: 278 GILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAMEENVFWEC 337

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   P  K +  WL+  EP+        +Q    +L +T  +  D+G Y C A+ +   
Sbjct: 338 KANGRP--KPTYKWLKNGEPLLTRDR---IQIEQGTLNITIVNLSDAGMYQCLAENKHGV 392

Query: 390 IEAQATLTV 398
           I + A L+V
Sbjct: 393 IFSNAELSV 401



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 117/303 (38%), Gaps = 34/303 (11%)

Query: 119 DLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D S L  P F  EP    F   +EE+ V   C+  G P+P I W  NG  +     + R 
Sbjct: 19  DDSTLHGPIFIQEPSPVMFPLDSEEKKVKLNCEVKGNPKPHIRWKLNGTDVDTG-MDFRY 77

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            V    + I N  K+ D G Y C ATNS G +         A+        +   +V  G
Sbjct: 78  SVVEGSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRG 137

Query: 234 KTVVLTCRVFGAPKPEVN-----WIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYT 286
           + +VL C     P P        WI N+        R+   ETG+L I  V  +D G YT
Sbjct: 138 QGMVLLC----GPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYT 193

Query: 287 CFARNK------LG-----TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           C   N       LG       +  G +   E       PE      G +    C A+ +P
Sbjct: 194 CVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNP 253

Query: 336 SLKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
               +I+W R   +PI    + R  +SN   L +    + D+G Y C A+       A+ 
Sbjct: 254 V--PTIIWRRADGKPI--ARKARRHKSNGI-LEIPNFQQEDAGLYECVAENSRGKNVARG 308

Query: 395 TLT 397
            LT
Sbjct: 309 QLT 311



 Score = 41.2 bits (95), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 21/192 (10%)

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            RG  +GY+V+ W  +D E + R+ I   G  T+T++     +      V A+N A  GP 
Sbjct: 830  RGRIQGYEVKYWRHEDKEENARK-IRTVGNQTSTKITNLKGSVLYHLAVKAYNSAGTGPS 888

Query: 492  SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
            S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 889  SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNR 944

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
             +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P  + 
Sbjct: 945  QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIPKISN 994

Query: 606  DNVEGRGSTPNN 617
                G G++ +N
Sbjct: 995  AYARGSGASTSN 1006


>gi|426257390|ref|XP_004022310.1| PREDICTED: neural cell adhesion molecule L1 isoform 1 [Ovis aries]
          Length = 1256

 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 136/471 (28%), Positives = 213/471 (45%), Gaps = 20/471 (4%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L + +V   D G Y 
Sbjct: 253 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLNVGEEDDGEYR 311

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G  + ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 312 CLAENSLGSDR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 370

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + NL+ SDT    C   N  G +  + Y+ V+    +I  
Sbjct: 371 IPVEELGKDQKYRIHHGALVLSNLQPSDTVAQ-CEPRNRHGLLLANAYIYVVELPAKILT 429

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
              + Y  V G T  L C+ FGAP P V W+  + +  L   R+     G L I D+   
Sbjct: 430 PDNETYMAVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNGTLGIRDLQAN 489

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T I   P     + G    F C A  DPSL+ S
Sbjct: 490 DTGHYFCQAANDQSNVTIVANLQVKDATRIMQGPRSTIEKRGSRVMFTCQASFDPSLQHS 549

Query: 341 IVWLRGSEPIDFE----SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA-T 395
             W R  + +D +    S+  F++  D  L +      D G Y+C A T+LD +E+QA  
Sbjct: 550 TTWRR--DALDLQELGDSDKYFIE--DERLVIHSLDYSDQGNYSCVASTKLDMVESQAEL 605

Query: 396 LTVQVPLEAPS-NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRE 454
           L V  P   P    +   ++   +  +SW+P    +       Y ++   ++        
Sbjct: 606 LVVGSPGPVPQLELSDRHLLKQSQVRLSWSPADDHN--APIEKYDIEFEDKEMAPEKWYS 663

Query: 455 LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVP 504
           L    G  T+T + K  P      RV A N    G PS +  + VTPE  P
Sbjct: 664 LGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPDSETVVTPEAAP 713



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 150/572 (26%), Positives = 239/572 (41%), Gaps = 68/572 (11%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--NLRKSDTGN 194
           A + + +  EC A G P P I W+    P+    P  R     +  T++  N+ + D G 
Sbjct: 254 ALQGQPLVLECIAEGFPTPTIKWLRPSGPM----PADRVTYQNHNKTLQLLNVGEEDDGE 309

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           Y C A NSLG      YV V A AP     P+      G+T  L C+V G P+PEV W  
Sbjct: 310 YRCLAENSLGSDRHAYYVTVEA-APYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRI 368

Query: 255 NQ---KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH-- 309
           N    +EL   +   +  G L ++++  +D+    C  RN+ G    +  + V E     
Sbjct: 369 NGIPVEELGKDQKYRIHHGALVLSNLQPSDTVA-QCEPRNRHGLLLANAYIYVVELPAKI 427

Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
           +T   E Y    G +A   C A   P    S+ WL        + E RF    + +L + 
Sbjct: 428 LTPDNETYMAVQGSTAYLLCKAFGAPVP--SVQWLDREGKTVLQDE-RFFPYTNGTLGIR 484

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ----VIDAKKAVVSWNP 425
                D+G Y C+A  +      Q+ +T+   L+      ++Q     I+ + + V +  
Sbjct: 485 DLQANDTGHYFCQAAND------QSNVTIVANLQVKDATRIMQGPRSTIEKRGSRVMF-- 536

Query: 426 VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNG 485
               + +  F      + T +     ++EL     +    E ++ V  S +++      G
Sbjct: 537 ----TCQASFDPSLQHSTTWRRDALDLQEL--GDSDKYFIEDERLVIHSLDYSD----QG 586

Query: 486 AYNGPPSEIISFVTPE------GVPGTVQSLEAIP---LGSSAFYLKWVKPEQPNGVLMG 536
            Y+   S  +  V  +      G PG V  LE      L  S   L W   +  N  +  
Sbjct: 587 NYSCVASTKLDMVESQAELLVVGSPGPVPQLELSDRHLLKQSQVRLSWSPADDHNAPIEK 646

Query: 537 YKIKYQSVKGTKVGP----LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 592
           Y I+++     ++ P     L ++P   + T+T+ KL+   P   Y   +    K G G 
Sbjct: 647 YDIEFED---KEMAPEKWYSLGKVP--GNQTSTTLKLS---PYVHYTFRVTAINKYGPGE 698

Query: 593 ESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
            S     V      P KNP +V+G G+  NN++I+W  +  ++ NAP  +YR+ WR    
Sbjct: 699 PSPDSETVVTPEAAPEKNPVDVKGEGNETNNMIITWKPLRWMDWNAPQVQYRVQWRPQKM 758

Query: 647 GEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
             AW +  V D     LV++N  TF PYEIKV
Sbjct: 759 QGAWQEQIVSD---PFLVVSNTSTFVPYEIKV 787



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 142/587 (24%), Positives = 231/587 (39%), Gaps = 60/587 (10%)

Query: 44   VALRNKKVELFCIFGGTPLPQTIW-SKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
            +A++     L C   G P+P   W  ++G  +   +R      G +L I+ ++ +D G Y
Sbjct: 436  MAVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNG-TLGIRDLQANDTGHY 494

Query: 103  TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP--EPEIHWV 160
             C+ +N      +   +L V  A      P          V F C+AS  P  +    W 
Sbjct: 495  FCQAANDQSNV-TIVANLQVKDATRIMQGPRSTIEKRGSRVMFTCQASFDPSLQHSTTWR 553

Query: 161  HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
             +   + +   + +  +   R+ I +L  SD GNY C A+  L  V     + V+     
Sbjct: 554  RDALDLQELGDSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDMVESQAELLVVGSPGP 613

Query: 221  ITEAP-KDEYTVDGKTVVLT---CRVFGAPKPEVNWIHNQKELTGGRYTILET--GDLKI 274
            + +    D + +    V L+        AP  + +     KE+   ++  L    G+   
Sbjct: 614  VPQLELSDRHLLKQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTS 673

Query: 275  TDVAFADSGEYT--CFARNKLGTAQGS--GSLTVKEHTHITDQPEDYEVEAGQSAT---- 326
            T +  +    YT    A NK G  + S      V         P D + E  ++      
Sbjct: 674  TTLKLSPYVHYTFRVTAINKYGPGEPSPDSETVVTPEAAPEKNPVDVKGEGNETNNMIIT 733

Query: 327  ---FRCNAVSDPSLKLSIVW----LRGSEPIDFESEPRFVQSNDYSL--------TVTKS 371
                R    + P ++  + W    ++G+      S+P  V SN  +         TV   
Sbjct: 734  WKPLRWMDWNAPQVQYRVQWRPQKMQGAWQEQIVSDPFLVVSNTSTFVPYEIKVQTVNSQ 793

Query: 372  SELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
             +    Q T     E D+ +A       +PL  P     ++ +++   +V W  V P  +
Sbjct: 794  GKGPEPQITIGYSGE-DYPQA-------IPLLEP-----VKALNSSTVLVRWQSVDPAQV 840

Query: 432  RGHFRGYKVQTWTE-KDGEGSIREL----IVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
            +GH RGY V  W E    + S R +    +V    +T+  +    P S     V AFNG 
Sbjct: 841  KGHLRGYNVTYWWEGSQRKHSKRHVHKGHVVVPANTTSAILGGLQPYSSYRVEVQAFNGR 900

Query: 487  YNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVK- 545
              GP S + +F TPEGVPG  ++L       ++  L W  P   NGVL GY + YQ +  
Sbjct: 901  GLGPASGM-TFNTPEGVPGHPEALHLECQSDTSLLLHWQPPLSHNGVLTGYVLSYQPLND 959

Query: 546  GTKVGPLLERLPY-ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            G+K     E+L + + DP   +  L  L P  +YR  L   T+ G G
Sbjct: 960  GSK-----EQLSFDLPDPELRTHNLTNLSPRLRYRFQLQATTREGPG 1001



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 161/691 (23%), Positives = 260/691 (37%), Gaps = 85/691 (12%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI  G    +L++ +++ SD  +  CE  
Sbjct: 352  LDCQVQGRPQPEVTWRINGIPVEELGKDQKYRIHHG----ALVLSNLQPSDTVA-QCEPR 406

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + E   A +  T    CKA G P P + W+   GK
Sbjct: 407  NRHGLLLANAY-IYVVELPAKILTPDNETYMAVQGSTAYLLCKAFGAPVPSVQWLDREGK 465

Query: 165  PISQAPPNPRRKVGP---NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q       +  P     + I +L+ +DTG+Y C A N    V   +  N+ +  A  
Sbjct: 466  TVLQ-----DERFFPYTNGTLGIRDLQANDTGHYFCQAANDQSNV--TIVANLQVKDATR 518

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFA 280
            I + P+      G  V+ TC+    P        + +  T  R   L+  +L  +D  F 
Sbjct: 519  IMQGPRSTIEKRGSRVMFTCQASFDP--------SLQHSTTWRRDALDLQELGDSDKYFI 570

Query: 281  DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            +       + +   + QG+ S        + +   +  V        +        LK S
Sbjct: 571  EDERLVIHSLDY--SDQGNYSCVASTKLDMVESQAELLVVGSPGPVPQLELSDRHLLKQS 628

Query: 341  IVWLRGS---------EPIDFESEPRFVQSND-YSLTVTKSSELDSG-------QYTCRA 383
             V L  S         E  D E E + +     YSL     ++  +         YT R 
Sbjct: 629  QVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYVHYTFRV 688

Query: 384  QTELDFIEAQAT---LTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSPQSLRG 433
                 +   + +    TV  P  AP        +D K         +++W P+       
Sbjct: 689  TAINKYGPGEPSPDSETVVTPEAAPEK----NPVDVKGEGNETNNMIITWKPLRWMDWNA 744

Query: 434  HFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
                Y+VQ W  +  +G+ +E IV+      +    FVP      +V   N    GP  +
Sbjct: 745  PQVQYRVQ-WRPQKMQGAWQEQIVSDPFLVVSNTSTFVPYE---IKVQTVNSQGKGPEPQ 800

Query: 494  IISFVTPEGVPGTVQSLEAI-PLGSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVKGTK 548
            I    + E  P  +  LE +  L SS   ++W  V P Q  G L GY + Y  +  +   
Sbjct: 801  ITIGYSGEDYPQAIPLLEPVKALNSSTVLVRWQSVDPAQVKGHLRGYNVTYWWEGSQRKH 860

Query: 549  VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF---KNP 605
                + +   +    TTSA L GL+P + YR+ +  +   G G  S   F  P     +P
Sbjct: 861  SKRHVHKGHVVVPANTTSAILGGLQPYSSYRVEVQAFNGRGLGPASGMTFNTPEGVPGHP 920

Query: 606  DNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVL 665
            + +     +  +L++ W   P + HN     Y + ++  N G    +    D    EL  
Sbjct: 921  EALHLECQSDTSLLLHW--QPPLSHNGVLTGYVLSYQPLNDGS--KEQLSFDLPDPELRT 976

Query: 666  ANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
             N     P   Y  ++  T  E  GE  IRE
Sbjct: 977  HNLTNLSPRLRYRFQLQATTREGPGEAIIRE 1007



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 83/338 (24%), Positives = 141/338 (41%), Gaps = 33/338 (9%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLII----K 92
           ++ V      V L C   G P  Q  W++DG+   P +     ++Q  +  S  I     
Sbjct: 43  RRVVVFPTDDVSLKCEASGKPEVQFRWTRDGILFKPKEELGMIVNQAPHSGSFSITGNSS 102

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
           +   S QG Y C  SN +G A S+ I L     P +   TV+P  +   E E+V   C  
Sbjct: 103 NFAQSFQGIYRCFASNKLGTAMSHEIQLMAEGTPKWPKETVKP--VEVEEGESVILPCHP 160

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 161 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 218

Query: 205 YVYK---DVYV----NVLAHAPEI---TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K   D+ V    +++   P +   T +      + G+ +VL C   G P P + W+ 
Sbjct: 219 IIQKEPIDLRVKATNSMMDRKPHLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 278

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++ +V   D GEY C A N LG+ + +  +TV+   +   +
Sbjct: 279 PSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSDRHAYYVTVEAAPYWLHK 338

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID 351
           P+ +    G++A   C     P  +  + W     P++
Sbjct: 339 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVE 374



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 122/298 (40%), Gaps = 42/298 (14%)

Query: 122 VLAAPYFTVE-PEFINAAEEETVTFECKASGLPEPEIHWVHNG---KP-------ISQAP 170
           V+  P  T + P  +     + V+ +C+ASG PE +  W  +G   KP       ++QAP
Sbjct: 31  VMEPPIITEQSPRRVVVFPTDDVSLKCEASGKPEVQFRWTRDGILFKPKEELGMIVNQAP 90

Query: 171 PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA----PEITEAPK 226
            +    +  N     N  +S  G Y C A+N LG       + ++A      P+ T  P 
Sbjct: 91  HSGSFSITGNS---SNFAQSFQGIYRCFASNKLGTAMSH-EIQLMAEGTPKWPKETVKPV 146

Query: 227 DEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL---TGGRYTILETGDLKITDVAFADS- 282
           +    +G++V+L C    + +P   +  N K L      R T+ + G+L   +V  +D+ 
Sbjct: 147 E--VEEGESVILPCHPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNH 204

Query: 283 GEYTCFARN------------KLGTAQGSGSLTVKEHTHITDQPEDYEVE-AGQSATFRC 329
            +Y C A               L     +  +  K H         + V   GQ     C
Sbjct: 205 SDYICHAHFPGTRTIIQKEPIDLRVKATNSMMDRKPHLLFPTNSSSHLVALQGQPLVLEC 264

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            A   P+   +I WLR S P+   ++    Q+++ +L +    E D G+Y C A+  L
Sbjct: 265 IAEGFPT--PTIKWLRPSGPM--PADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSL 318


>gi|52138691|ref|NP_001004395.1| contactin-2 precursor [Gallus gallus]
 gi|114735|sp|P28685.1|CNTN2_CHICK RecName: Full=Contactin-2; AltName: Full=Axonin-1; Flags: Precursor
 gi|62853|emb|CAA44815.1| axonin-1 [Gallus gallus]
          Length = 1036

 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 175/633 (27%), Positives = 281/633 (44%), Gaps = 50/633 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLI-IKHVEFSDQGSY 102
           AL  + V L C   G P+PQ  W K DG       + S+    + L+ I++V+F D+G+Y
Sbjct: 246 ALTGQMVTLECFAFGNPVPQIKWRKLDG------SQTSKWLSSEPLLHIQNVDFEDEGTY 299

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            CE  N  G   +Y   + + A P +        A     + + C ASG P P + W+ +
Sbjct: 300 ECEAENIKGR-DTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRD 358

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           G+P++      R +V    +    L   D+G Y C A N  G VY    + V A AP+  
Sbjct: 359 GQPLAS---QNRIEVSGGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQALAPDFR 415

Query: 223 EAPKDEYTVDGKT--VVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
             P        ++  V++ C+   APK  V W    + LT   R TI   G L + +++ 
Sbjct: 416 LNPVKRLIPAARSGKVIIPCQPRAAPKATVLWTKGTELLTNSSRVTITADGTLILQNISK 475

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           +D G+YTCFA N +G A  +G L+V++ T IT  P   ++  G++ T +C+A  DP++ L
Sbjct: 476 SDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGENLTLQCHASHDPTMDL 535

Query: 340 SIVWLRGSEPIDFE-SEPRF----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +  W     PID + SE  +    V+     L +  +    SG+YTC AQT +D     A
Sbjct: 536 TFTWSLDDFPIDLDKSEGHYRRASVKEAVGDLAIVNAQLKHSGRYTCTAQTVVDSTSESA 595

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHFRGYKVQTWTEKD 447
           TLTV+ P   P    +  + D     +SW       +P++  S+    R      W +  
Sbjct: 596 TLTVRGPPGPPGGVVVRDIGDT-TVQLSWSRGFDNHSPIARYSIEA--RTLLSNKWKQ-- 650

Query: 448 GEGSIRELIVN-KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               +R   VN +G + T +V   +P      RVLA N    G PS   S + T E  P 
Sbjct: 651 ----MRTNPVNIEGNAETAQVVNLIPWMDYEFRVLASNILGVGEPSLPSSKIRTKEAAPT 706

Query: 506 TVQSLEAIPLGS-SAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S      G+ +   + W     +  NG   GY + ++  KGT+ G L  R+P+ ++ 
Sbjct: 707 VAPSGLGGGGGAPNELIINWTPTLRDYQNGDGFGYILSFRK-KGTQ-GWLTARVPH-AES 763

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGSTPNN 617
                +   + P T + + +  Y + G+G ES   + Y     P   P  V  +    + 
Sbjct: 764 LHYVYRNESIGPYTPFEVKIKAYNRKGEGPESLTAIVYSAEEEPKVAPFRVTAKAVLSSE 823

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FWRRHNTGEA 649
           + +SW  + + +       Y I +W+  +  EA
Sbjct: 824 MDVSWEPVEQGDMTGVLLGYEIRYWKDGDKEEA 856



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 152/370 (41%), Gaps = 30/370 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           +KV L C     P     W  +G  + + P  R  +   G  +I   V+  D GSY C  
Sbjct: 50  EKVTLTCRARANPPATYRWKMNGTELKMGPDSRY-RLVAGDLVISNPVKAKDAGSYQCVA 108

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVHNGK 164
           +N  G   S    L       F+ E  + +   E   V F C      P     W+ N  
Sbjct: 109 TNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEF 168

Query: 165 PISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYV---------- 212
           P +  P + RR V      + I     SD GNY C AT+ + ++ K V+           
Sbjct: 169 P-NFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAE 227

Query: 213 NVLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD 271
           +   +AP I  + P D Y + G+ V L C  FG P P++ W    ++L G + +   + +
Sbjct: 228 DARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKW----RKLDGSQTSKWLSSE 283

Query: 272 --LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
             L I +V F D G Y C A N  G     G + +       D   D E + G    + C
Sbjct: 284 PLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSC 343

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   P  + ++ WLR  +P+  ++    ++ +   L  +K    DSG Y C A+ +   
Sbjct: 344 VASGKP--RPAVRWLRDGQPLASQNR---IEVSGGELRFSKLVLEDSGMYQCVAENKHGT 398

Query: 390 IEAQATLTVQ 399
           + A A LTVQ
Sbjct: 399 VYASAELTVQ 408



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 137/583 (23%), Positives = 228/583 (39%), Gaps = 72/583 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C+  G P P   W +DG P+   +RI     G  L    +   D G Y C   N  G   
Sbjct: 343 CVASGKPRPAVRWLRDGQPLASQNRIEVS--GGELRFSKLVLEDSGMYQCVAENKHGTVY 400

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F + P    I AA    V   C+    P+  + W    + ++ +  
Sbjct: 401 A-SAELTVQALAPDFRLNPVKRLIPAARSGKVIIPCQPRAAPKATVLWTKGTELLTNSS- 458

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  +  +  + ++N+ KSD G Y C A N +G       ++V   A +IT AP     
Sbjct: 459 --RVTITADGTLILQNISKSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 515

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKEL------TGGRY---TILE-TGDLKITDVAFA 280
             G+ + L C     P  ++ +  +  +       + G Y   ++ E  GDL I +    
Sbjct: 516 NVGENLTLQCHASHDPTMDLTFTWSLDDFPIDLDKSEGHYRRASVKEAVGDLAIVNAQLK 575

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            SG YTC A+  + +   S +LTV+            ++              D +++LS
Sbjct: 576 HSGRYTCTAQTVVDSTSESATLTVRGPPGPPGGVVVRDI-------------GDTTVQLS 622

Query: 341 IVWLRGSE---PI-DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE----- 391
             W RG +   PI  +  E R + SN +    T    ++    T +    + +++     
Sbjct: 623 --WSRGFDNHSPIARYSIEARTLLSNKWKQMRTNPVNIEGNAETAQVVNLIPWMDYEFRV 680

Query: 392 -AQATLTV--------------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR 436
            A   L V                P  APS           + +++W P       G   
Sbjct: 681 LASNILGVGEPSLPSSKIRTKEAAPTVAPSGLGGGGGA-PNELIINWTPTLRDYQNGDGF 739

Query: 437 GYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFV-PASKNFARVLAFNGAYNGPPSEII 495
           GY + ++ +K  +G +   + +         ++ + P +    ++ A+N    GP S   
Sbjct: 740 GY-ILSFRKKGTQGWLTARVPHAESLHYVYRNESIGPYTPFEVKIKAYNRKGEGPESLTA 798

Query: 496 SFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPEQPN--GVLMGYKIKYQSVKGTKVGPL 552
              + E  P      + A  + SS   + W   EQ +  GVL+GY+I+Y      K G  
Sbjct: 799 IVYSAEEEPKVAPFRVTAKAVLSSEMDVSWEPVEQGDMTGVLLGYEIRYW-----KDGDK 853

Query: 553 LERLPYISDP-TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            E    +      TSA + GL P+TKY + +  Y +AG G  S
Sbjct: 854 EEAADRVRTAGLVTSAHVTGLNPNTKYHVSVRAYNRAGAGPPS 896



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 107/286 (37%), Gaps = 40/286 (13%)

Query: 126 PYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
           P F  +P    F   + EE VT  C+A   P     W  NG  +   P +  R V  + +
Sbjct: 32  PVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDLV 91

Query: 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR 241
               ++  D G+Y C ATN+ G V             E +   +D   + +G  V+ TC 
Sbjct: 92  ISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTC- 150

Query: 242 VFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNK 292
              +P P        W+ N+        G R+    TG+L I     +D G Y+CFA + 
Sbjct: 151 ---SPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSH 207

Query: 293 LGTAQGSG-------SLTVKEHTHITDQ-----PEDYEVEAGQSATFRCNAVSDPSLKLS 340
           +     S        SL  ++            P D     GQ  T  C A  +P  ++ 
Sbjct: 208 IDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIK 267

Query: 341 IVWLRGSEPID-FESEPRF-VQSNDYSLTVTKSSELDSGQYTCRAQ 384
              L GS+      SEP   +Q+ D+          D G Y C A+
Sbjct: 268 WRKLDGSQTSKWLSSEPLLHIQNVDFE---------DEGTYECEAE 304



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 76/187 (40%), Gaps = 16/187 (8%)

Query: 216 AHAPEITEAPKDEYTVDGKT---VVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILET 269
           ++ P   E P      +G     V LTCR    P     W  N  EL  G   RY ++  
Sbjct: 29  SYGPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLV-A 87

Query: 270 GDLKITD-VAFADSGEYTCFARNKLGTA-QGSGSLTVKEHTHITDQPED-YEVEAGQSAT 326
           GDL I++ V   D+G Y C A N  GT      SL        + +  D  ++  G    
Sbjct: 88  GDLVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVM 147

Query: 327 FRCNAVSDPSL--KLSIVWLRGSEPIDFESE-PRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           F C   S P     LS  WL    P    ++  RFV     +L + K+   D G Y+C A
Sbjct: 148 FTC---SPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFA 204

Query: 384 QTELDFI 390
            + +DFI
Sbjct: 205 TSHIDFI 211



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 4/144 (2%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P  AP   T   V+ ++  V SW PV    + G   GY+++ W + D E +  + +   G
Sbjct: 807 PKVAPFRVTAKAVLSSEMDV-SWEPVEQGDMTGVLLGYEIRYWKDGDKEEAA-DRVRTAG 864

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
             T+  V    P +K    V A+N A  GPPS   +  T +  P       +  L  S  
Sbjct: 865 LVTSAHVTGLNPNTKYHVSVRAYNRAGAGPPSPSTNITTTKPPPRRPPGNISWTLTGSTV 924

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            +KW  V  +     + GYK+ Y+
Sbjct: 925 TIKWDPVVAQADESAVTGYKMLYR 948


>gi|402593368|gb|EJW87295.1| immunoglobulin I-set domain-containing protein, partial [Wuchereria
           bancrofti]
          Length = 915

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 132/440 (30%), Positives = 210/440 (47%), Gaps = 35/440 (7%)

Query: 8   EYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIW 67
           +YK GN+  L+V      A  +   P +QYV +   +AL     +L C F G P P+ IW
Sbjct: 30  DYKFGNQFRLDVTKNRRRALTSPIPPSEQYVNQSSPIALEGNTHKLHCFFSGYPEPKPIW 89

Query: 68  SKDGVPINPSD-RISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAP 126
             +G  I   D R +  +YGK+L+  +V    +G Y C         + +  D+ + AAP
Sbjct: 90  RYNGFDILEDDSRYTYESYGKTLVF-NVSAETEGIYECIFKAHPNLDRRF--DVVIEAAP 146

Query: 127 YFTV-EPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR--KVGPNRIT 183
           Y+T   P     +E E VTF+C A+G P P I +  NG  +     +  R  ++  + +T
Sbjct: 147 YWTTGPPPNKRTSEGEDVTFDCSANGKPAPVISFFKNGVEMKPRDDDVNRNWEITGSVLT 206

Query: 184 IENLRKS-----DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVL 238
           ++N++K      D   Y C A N  GY++ + Y+N+LA  PE+   P +   V G+ V L
Sbjct: 207 LKNVKKGIAGSGDNAVYQCKAENKHGYLWANFYLNLLAFKPELLSDPGEIEAVIGQNVTL 266

Query: 239 TCRVFGAPKPEVNWIHNQKELTGGRYTILET-----GDLKITDVAFADSGEYTCFARNKL 293
           +C+ F +P   + W  +   L G R+ ++       G L I  V     GEYTC   NK 
Sbjct: 267 SCKFFASPNVNITW--DSAVLHGLRHHVVPADADGEGKLIIDAVGQDAEGEYTCTGTNKH 324

Query: 294 GTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID 351
           GT +G+  + ++E T +   ++P + +V AGQ     C A  D +L+++  WL   +P+ 
Sbjct: 325 GTEKGTAHIIIREATRLEPFERPLE-KVLAGQRLELPCRAEHDENLEVTYEWLVNGKPL- 382

Query: 352 FESEPRFVQSNDY------SLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV-QVPLEA 404
                +++QS  Y      SL +T  +  D+  YTC A+T LD  E    + V  VP   
Sbjct: 383 ---IEQYIQSGHYLITDKNSLIITNPARYDAAIYTCIAKTALDSAEKSVQIGVDDVP--N 437

Query: 405 PSNFTLIQVIDAKKAVVSWN 424
           P +   +   D    + S N
Sbjct: 438 PVHMAFLTKCDDTAQIASIN 457



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 126/315 (40%), Gaps = 66/315 (20%)

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPID-FESEPRFVQSNDYSLTVTKSSELDSGQY 379
           AG  A ++   V DP      + L   EP   +E + R    N  S    +S E  +G+ 
Sbjct: 597 AGSDAEWKEEIVEDPYSDRHTIELSVEEPFRPYEVQVRAANENGTSNVSPQSVEGRTGEG 656

Query: 380 TCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYK 439
                                P   P+ F LI   D+  A   W+P+ PQ ++G+F G K
Sbjct: 657 D--------------------PGFTPTGFKLI-TSDSTSATFEWDPIDPQQVQGNFTGIK 695

Query: 440 VQTW------------------------------------TEKDGEGSIRELIVNKGEST 463
           +  W                                    ++ +  G  R +IV   + +
Sbjct: 696 IIFWPEEDEGESSEDELETGNIARLKKHSVLRRSTGEVLTSQTNMYGEKRNVIVAPNKKS 755

Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLG------S 517
            T +    P S N+A++   NG  +G PS+ ISF T EGVP  V++LEA P+       +
Sbjct: 756 AT-IFGLQPNSVNYAQIAVMNGQNDGTPSDPISFRTKEGVPTPVRNLEAYPMNGRDEREN 814

Query: 518 SAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY-ISDPTTTSAKLAGLEPST 576
           +   ++W +P   NG L GY ++  SV    +    E  P   + P     +++ LE  +
Sbjct: 815 AVVAIRWDQPRHYNGRLTGYSVEICSVNADGLMEQRESCPIRKTQPGERFLRISNLENDS 874

Query: 577 KYRIHLAGYTKAGDG 591
           KYR  + G T AG G
Sbjct: 875 KYRFIVYGNTNAGRG 889


>gi|357621018|gb|EHJ73004.1| putative protein sidekick precursor [Danaus plexippus]
          Length = 2135

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 176/631 (27%), Positives = 262/631 (41%), Gaps = 88/631 (13%)

Query: 53  LFCIFGGTPLPQ--TIWSKDGVPINPS----DRISQGNYGKSLIIKHVEFSDQGSYTCE- 105
           ++CI    PL +  T+W KDGV I+ +    D   Q N   SLI  ++  +  G YTC+ 
Sbjct: 209 VYCIANARPLHELETLWFKDGVLIDLAGITYDLNDQWNRTLSLISANLNHT--GQYTCQA 266

Query: 106 -VSNGVGEAKSYSIDLSVLAAPYF--TVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            + +G     + S  ++V   P    +++PE        +V  EC   G+P P I W  +
Sbjct: 267 RLKSGGFATVTASATVTVFEKPVMPTSLKPETFGEFGS-SVVLECNVQGIPIPSITWYKD 325

Query: 163 GKPISQAPPNP------------RRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKD 209
            + I+    +             R +V  +R + I +L+  D G Y C A N+ G     
Sbjct: 326 ARKIASVGADAASDNSDVDDGGGRYRVDVDRSLVISHLKMEDMGIYQCIANNAAGESSIY 385

Query: 210 VYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT--GGRYTIL 267
            ++ +    P +   P +   +DGK   ++CR  GAP P V W  N   +    GR   L
Sbjct: 386 SWLKIKTSPPIMQTGPANLTVLDGKDATISCRAIGAPTPNVTWYFNDSLIINLSGRLQAL 445

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
           + GDL IT VA ADSG+YTC   N  G   G   LTV   T I   P D  V  G +AT 
Sbjct: 446 DEGDLLITSVATADSGKYTCIRANDAGNVSGEAYLTVLVRTQIIAPPVDTRVLLGHTATL 505

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
           +C   SDP++K +I W    +P+   S  R   S D SL V      D+G+YTC   +  
Sbjct: 506 QCKVSSDPNVKYNIDWFHNKQPMTAGS--RVWVSVDGSLQVQAVRAGDAGEYTCVVTSPG 563

Query: 388 DFIEAQATLTV-QVPLEAPSNFTLIQVIDAKKAV-VSWNPVSPQSLRGHFRGYKVQTWTE 445
                +ATL+V ++P  +PSN    ++   ++AV VSW P           G+       
Sbjct: 564 GNHTRRATLSVIELPF-SPSNVRADRLASPQRAVNVSWTP-----------GF------- 604

Query: 446 KDGEGSIRELIVNK------------------------GESTTTEVDKFVPASKNFARVL 481
            DG   I++ IV +                               +     A+    RV 
Sbjct: 605 -DGNSPIQKFIVQRRVVPEFGPIPDPLLNWVTEPMNVSANQRWVLLTSLKAATSYQFRVS 663

Query: 482 AFNGAYNGPPSEIISFVT-PEGVP-GTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGY 537
           A N    GPPS+    +T P+  P G           SS    +W  P  E  NG ++GY
Sbjct: 664 AVNTVGEGPPSDPTDVLTLPQEAPSGPPLGFMGSARSSSEIITQWQPPLEEHRNGHILGY 723

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES--- 594
            I+Y+ +KG +  P   +   I++    +  +  L     Y + +A Y   G G  S   
Sbjct: 724 VIRYR-LKGYENSPWTYQ--NITNEAQRNYLIQDLITWKDYNVQIAAYNDKGVGMFSDSY 780

Query: 595 --KYLFYVPFKNPDNVEGRGSTPNNLVISWT 623
             K    VP   PD+V         + + WT
Sbjct: 781 TIKTKEGVPEAPPDSVRCDPYNSTAIQVWWT 811



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 148/599 (24%), Positives = 241/599 (40%), Gaps = 69/599 (11%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPI---------NPSDRISQG-----NYGKSLIIKHVEF 96
           V L C   G P+P   W KD   I         + SD    G     +  +SL+I H++ 
Sbjct: 306 VVLECNVQGIPIPSITWYKDARKIASVGADAASDNSDVDDGGGRYRVDVDRSLVISHLKM 365

Query: 97  SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE 156
            D G Y C  +N  GE+  YS      + P     P  +   + +  T  C+A G P P 
Sbjct: 366 EDMGIYQCIANNAAGESSIYSWLKIKTSPPIMQTGPANLTVLDGKDATISCRAIGAPTPN 425

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           + W  N   I        + +    + I ++  +D+G Y C   N  G V  + Y+ VL 
Sbjct: 426 VTWYFNDSLIINLS-GRLQALDEGDLLITSVATADSGKYTCIRANDAGNVSGEAYLTVLV 484

Query: 217 HAPEITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWIHNQKELTGG-RYTILETGDLK 273
              +I   P D   + G T  L C+V   P  K  ++W HN++ +T G R  +   G L+
Sbjct: 485 RT-QIIAPPVDTRVLLGHTATLQCKVSSDPNVKYNIDWFHNKQPMTAGSRVWVSVDGSLQ 543

Query: 274 ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVS 333
           +  V   D+GEYTC   +  G      +L+V E                  +  R + ++
Sbjct: 544 VQAVRAGDAGEYTCVVTSPGGNHTRRATLSVIELPF-------------SPSNVRADRLA 590

Query: 334 DPSLKLSIVW---LRGSEPI---------------------DFESEPRFVQSNDYSLTVT 369
            P   +++ W     G+ PI                     ++ +EP  V +N   + +T
Sbjct: 591 SPQRAVNVSWTPGFDGNSPIQKFIVQRRVVPEFGPIPDPLLNWVTEPMNVSANQRWVLLT 650

Query: 370 KSSELDSGQYTCRA-QTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKA---VVSWNP 425
                 S Q+   A  T  +   +  T  + +P EAPS   L  +  A+ +   +  W P
Sbjct: 651 SLKAATSYQFRVSAVNTVGEGPPSDPTDVLTLPQEAPSGPPLGFMGSARSSSEIITQWQP 710

Query: 426 VSPQSLRGHFRGYKVQTWTEKDGEGS--IRELIVNKGESTTTEVDKFVPASKNFARVLAF 483
              +   GH  GY ++ +  K  E S    + I N+ +      D       N  ++ A+
Sbjct: 711 PLEEHRNGHILGYVIR-YRLKGYENSPWTYQNITNEAQRNYLIQDLITWKDYN-VQIAAY 768

Query: 484 NGAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWV--KPEQPNGVLMGYKIK 540
           N    G  S+  +  T EGVP     S+   P  S+A  + W    P++ NG+       
Sbjct: 769 NDKGVGMFSDSYTIKTKEGVPEAPPDSVRCDPYNSTAIQVWWTPPNPQKINGINQIQAWL 828

Query: 541 YQSVKGTKV-GPLLERLPYISDPTT-TSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL 597
           +   +   V   L+   P + DP T  +A + GLE  T+Y I +  +T+ GDG  S+++
Sbjct: 829 WDDSQNDSVEQKLVSVPPNLLDPLTEQTAVINGLEKFTEYNISVLCFTEPGDGPRSEFI 887



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 149/611 (24%), Positives = 241/611 (39%), Gaps = 104/611 (17%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWS-KDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           L  K   + C   G P P   W   D + IN S R+   + G  L+I  V  +D G YTC
Sbjct: 407 LDGKDATISCRAIGAPTPNVTWYFNDSLIINLSGRLQALDEGD-LLITSVATADSGKYTC 465

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE--IHWVHN 162
             +N  G     +  L+VL        P         T T +CK S  P  +  I W HN
Sbjct: 466 IRANDAGNVSGEAY-LTVLVRTQIIAPPVDTRVLLGHTATLQCKVSSDPNVKYNIDWFHN 524

Query: 163 GKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAP 219
            +P++      R  V  +  + ++ +R  D G Y C  T+  G   +   ++V  L  +P
Sbjct: 525 KQPMTAGS---RVWVSVDGSLQVQAVRAGDAGEYTCVVTSPGGNHTRRATLSVIELPFSP 581

Query: 220 EITEA-----PKDEYTV------DGKT----VVLTCRV---FG-APKPEVNWIHNQKELT 260
               A     P+    V      DG +     ++  RV   FG  P P +NW+     ++
Sbjct: 582 SNVRADRLASPQRAVNVSWTPGFDGNSPIQKFIVQRRVVPEFGPIPDPLLNWVTEPMNVS 641

Query: 261 GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             +  +L      +T +  A S ++   A N +G    S      + T +   P+  E  
Sbjct: 642 ANQRWVL------LTSLKAATSYQFRVSAVNTVGEGPPS------DPTDVLTLPQ--EAP 687

Query: 321 AGQSATFRCNAVSDPSLKLSIVW--------------------LRGSE--PIDFESEPRF 358
           +G    F  +A S  S ++   W                    L+G E  P  +++    
Sbjct: 688 SGPPLGFMGSARS--SSEIITQWQPPLEEHRNGHILGYVIRYRLKGYENSPWTYQNITNE 745

Query: 359 VQSN----------DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNF 408
            Q N          DY++ +   ++   G           F ++    T +   EAP + 
Sbjct: 746 AQRNYLIQDLITWKDYNVQIAAYNDKGVGM----------FSDSYTIKTKEGVPEAPPDS 795

Query: 409 TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG-SIRELIVNKGESTT--- 464
                 ++    V W P +PQ + G     ++Q W   D +  S+ + +V+   +     
Sbjct: 796 VRCDPYNSTAIQVWWTPPNPQKINGI---NQIQAWLWDDSQNDSVEQKLVSVPPNLLDPL 852

Query: 465 TEVDKFVPASKNFAR----VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           TE    +   + F      VL F    +GP SE IS  T E +P  V +L+   +   A 
Sbjct: 853 TEQTAVINGLEKFTEYNISVLCFTEPGDGPRSEFISVRTKEDIPDEVMNLQFDDISDRAV 912

Query: 521 YLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRI 580
            + W  P++ NGVL+GYK+KYQ +K        E LP    P  TS ++  L+ ST+Y+ 
Sbjct: 913 RVSWSPPKKSNGVLIGYKLKYQ-IKENPETFKEEILP----PNVTSVRVEHLQASTQYQF 967

Query: 581 HLAGYTKAGDG 591
            ++  T  G+G
Sbjct: 968 WVSALTGVGEG 978



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 117/281 (41%), Gaps = 29/281 (10%)

Query: 139 EEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCN 198
           E  T   +C A G+P+P   W+ NG PI         K       I N ++ D G Y C 
Sbjct: 12  EGTTKILQCSAIGIPQPMYRWLKNGVPIGDYSSELFFK-------IHNTQRQDAGAYQCI 64

Query: 199 ATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTC-RVFGAPKPEVNWIHNQ 256
           A N +G ++ +    V+A+        +   TV+ GK  +L    +   P P V W  ++
Sbjct: 65  AKNDVGAIFSEKNNIVVAYMGVFENTLEQVVTVESGKAAILDFPHIESDPPPSVIW-QDE 123

Query: 257 KELTG-----GRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGS--------GSL 302
             + G      +Y I +   L I   +  D   Y   A N +LG  + S        G  
Sbjct: 124 NGVNGVLRYDQKYAITDKHQLVILCSSKDDQRAYRARAINTQLGKVENSPYIRLIVDGDD 183

Query: 303 TVKEHTHITDQPEDYEVEAGQSAT-FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS 361
             +    I  +P+D ++  GQ  T   C A + P  +L  +W +    ID       +  
Sbjct: 184 NKEIAPEIIIKPQDTKIIKGQEYTNVYCIANARPLHELETLWFKDGVLIDLAGITYDLND 243

Query: 362 N-DYSLTVTKSSELDSGQYTCRAQTE---LDFIEAQATLTV 398
             + +L++  ++   +GQYTC+A+ +      + A AT+TV
Sbjct: 244 QWNRTLSLISANLNHTGQYTCQARLKSGGFATVTASATVTV 284



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 156/418 (37%), Gaps = 68/418 (16%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK--HVEFSDQGSYTCEVSNGV 110
           L C   G P P   W K+GVPI        G+Y   L  K  + +  D G+Y C   N V
Sbjct: 18  LQCSAIGIPQPMYRWLKNGVPI--------GDYSSELFFKIHNTQRQDAGAYQCIAKNDV 69

Query: 111 GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGL--------PEPEIHWV-H 161
           G   S   ++ V    Y  V   F N  E+       KA+ L        P P + W   
Sbjct: 70  GAIFSEKNNIVVA---YMGV---FENTLEQVVTVESGKAAILDFPHIESDPPPSVIWQDE 123

Query: 162 NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS-LGYVYKDVYVNVLAH--- 217
           NG                +++ I    K D   Y   A N+ LG V    Y+ ++     
Sbjct: 124 NGVNGVLRYDQKYAITDKHQLVILCSSKDDQRAYRARAINTQLGKVENSPYIRLIVDGDD 183

Query: 218 ----APEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVN--WIHNQK--ELTGGRYTILE 268
               APEI   P+D   + G+    + C     P  E+   W  +    +L G  Y + +
Sbjct: 184 NKEIAPEIIIKPQDTKIIKGQEYTNVYCIANARPLHELETLWFKDGVLIDLAGITYDLND 243

Query: 269 TGD--LKITDVAFADSGEYTCFARNKLG---TAQGSGSLTVKEHTHI--TDQPEDYEVEA 321
             +  L +       +G+YTC AR K G   T   S ++TV E   +  + +PE +  E 
Sbjct: 244 QWNRTLSLISANLNHTGQYTCQARLKSGGFATVTASATVTVFEKPVMPTSLKPETFG-EF 302

Query: 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPI-----DFESEP--------RFVQSNDYSLTV 368
           G S    CN    P    SI W + +  I     D  S+         R+    D SL +
Sbjct: 303 GSSVVLECNVQGIP--IPSITWYKDARKIASVGADAASDNSDVDDGGGRYRVDVDRSLVI 360

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVS 422
           +     D G Y C A          + L ++    +    P+N T   V+D K A +S
Sbjct: 361 SHLKMEDMGIYQCIANNAAGESSIYSWLKIKTSPPIMQTGPANLT---VLDGKDATIS 415



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 118/298 (39%), Gaps = 36/298 (12%)

Query: 352  FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE-AQATLTVQVPLEAPSNFTL 410
            +++ P  V     S TV       + Q+  RA  ++     + AT TV+    APS    
Sbjct: 1444 WQTLPERVDPFATSYTVDGLKPYTAYQFRIRATNDIGPSRYSNATETVRTLPAAPSKA-- 1501

Query: 411  IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWT--EKDGEGSIRELIVNKGESTTTEVD 468
                  +K VV   P++P S+R  +R    Q W+   + G  S+    +    S    + 
Sbjct: 1502 -----VEKLVVV--PITPSSVRVQWRALGEQHWSGDTRTGGYSVSYQPLTDFTSLQRAMK 1554

Query: 469  KFVPASKNFARVL--------------AFNGAYNGPPSEIISFVTPEGVP-GTVQSLEAI 513
            + VP  K+   +L              A N    GP          E VP    Q +EA 
Sbjct: 1555 REVPGIKSEEVILTDLAVDRNYEISVCAVNSQGAGPVGAPAVVWVGEAVPTAPPQQVEAR 1614

Query: 514  PLGSSAFYLKWVKP--EQPNGVLMGYKIKY---QSVKGTKVGPLLERLPYISDPTTTSAK 568
             L  +   L W  P   Q NG L+GYKI Y   +S +  + G   E    +   T TS  
Sbjct: 1615 ALSPTEVALTWHPPLQAQQNGDLLGYKIFYLMTESPEEPEPGRRAEEEIEVVPATATSHS 1674

Query: 569  LAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKN----PDNVEGRGSTPNNLVISW 622
            L  L+  T+YRI +  +  AGDG  S  +     +     P N+     T N+LV+SW
Sbjct: 1675 LVFLDKFTQYRIQVLAFNPAGDGPRSTAIQVRTHQGLPSAPRNITFTDITMNSLVVSW 1732



 Score = 47.0 bits (110), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 85/204 (41%), Gaps = 21/204 (10%)

Query: 404  APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV-QTWTE--------KDGEGSIRE 454
            AP      + +   +  ++W+P       G   GYK+    TE        +  E  I  
Sbjct: 1606 APPQQVEARALSPTEVALTWHPPLQAQQNGDLLGYKIFYLMTESPEEPEPGRRAEEEIEV 1665

Query: 455  LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
            +       +   +DKF   ++   +VLAFN A +GP S  I   T +G+P   +++    
Sbjct: 1666 VPATATSHSLVFLDKF---TQYRIQVLAFNPAGDGPRSTAIQVRTHQGLPSAPRNITFTD 1722

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA--GL 572
            +  ++  + W  P++ NG++  Y + Y++++        ER            +LA   L
Sbjct: 1723 ITMNSLVVSWEPPQRRNGLIHSYLVTYETIEQD------ERFSKQVKQKVNERRLAVGTL 1776

Query: 573  EPSTKYRIHLAGYT-KAGDGAESK 595
            E   +YR  +   T  +G  AE++
Sbjct: 1777 EEEVEYRFSVKAVTVGSGAAAEAR 1800



 Score = 40.8 bits (94), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 84/207 (40%), Gaps = 16/207 (7%)

Query: 397  TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
            T+Q P + P     ++ + A    V W P+      G+ +GY +    ++ G       I
Sbjct: 1088 TIQAPPQHPPRNVTVRAVSANNLRVRWIPLQQSEWYGNPKGYNIT--YKRSGSNDTLYSI 1145

Query: 457  VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPL 515
            ++   + +  +      S     + A N       S   +  T E VP +   ++ A   
Sbjct: 1146 IDDHTANSHVLSNLEEWSVYEITMTAINEVGTSAVSPTATERTREAVPSSGPINVSANAT 1205

Query: 516  GSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGP------LLERLPYISDPTTTSA 567
             S+   + W  +  +  NG++ GYK+ Y +V    V P       +E  P  S+ T T  
Sbjct: 1206 SSTTVVVLWGDIPLQDQNGLIEGYKVCYAAV----VPPPRPEHKKVECHPIPSNQTHT-V 1260

Query: 568  KLAGLEPSTKYRIHLAGYTKAGDGAES 594
             L  L     Y++ + GYT+ GDGA S
Sbjct: 1261 TLTELRKYVVYQVQVLGYTRLGDGALS 1287


>gi|426249258|ref|XP_004018367.1| PREDICTED: contactin-4 [Ovis aries]
          Length = 1026

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 191/727 (26%), Positives = 294/727 (40%), Gaps = 112/727 (15%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P  IW + DG PI    R  + N    L I + +  D G Y C   N 
Sbjct: 243 VKLECFALGNPVPTIIWRRADGKPIATKARRHKSN--GILEIPNFQQEDAGLYECVAENS 300

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P ++ +   I+ A EE V +ECKA+G P+P   W+ NG+P+   
Sbjct: 301 RGKNVAKG-QLTFYAQPNWSQKINDIHVAIEENVFWECKANGRPKPTYRWLKNGEPLLT- 358

Query: 170 PPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
               R ++    G   ITI NL  SD G Y C A N  G ++    ++V+A  P+ +   
Sbjct: 359 ----RDRIHIEQGTLNITIVNL--SDAGMYQCVAENKHGVIFSSAELSVIAVGPDFSRTL 412

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADS 282
               T+   G  VV+ C+   +PKP   W   +  L    R TI E G L+I +V  +D+
Sbjct: 413 LKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDVLKENERITISEDGSLRIINVTKSDA 472

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   
Sbjct: 473 GSYTCIATNHFGTASSTGNLVVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLNIVFT 532

Query: 343 WLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           W      IDF+ +         Q +   L +       +G+Y C  QT +D + A A L 
Sbjct: 533 WSFNGRLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLI 592

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGE 449
           V+ P   P   T+ ++ D   A +SW P     SP ++      Y +Q  T         
Sbjct: 593 VRGPPGPPEAVTIDEITDT-TAQLSWRPGPDNHSPVTM------YVIQARTPFSVGWQAV 645

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTP 500
            ++ ELI   G++ T  V    P  +   R +A N    G PS         E +  VTP
Sbjct: 646 NTVPELI--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTP 703

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
             V G   S        S   + W  V  E  NG   GY + ++       G ++  L  
Sbjct: 704 ANVSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFRP-----YGKMIWMLTV 751

Query: 559 I--SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGR 611
           +  +D +    +   + P + + + +  +   G+G  S           P K P ++  R
Sbjct: 752 LASADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFAR 811

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
             +  ++ + W +  E                                       N+   
Sbjct: 812 SLSATDIEVFWASPME--------------------------------------KNRGRI 833

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
           Q YE+K    W   D E + R+ I   G  T+T++     ++     V A+N A  GP S
Sbjct: 834 QGYEVKY---WRHDDKEENARK-IRTIGNQTSTKITNLKGSALYHLAVKAYNSAGTGPSS 889

Query: 732 EIISFVT 738
             ++  T
Sbjct: 890 ATVNVTT 896



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 162/638 (25%), Positives = 240/638 (37%), Gaps = 85/638 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V+ PE +  
Sbjct: 178 NLYIAKVEKSDVGNYTCVVTNTVTNQKVLGPPTPLILRNDGVMGEYEPKIEVQFPEMVPT 237

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   +GKPI+      RR      + I N ++ D G Y 
Sbjct: 238 AKGTTVKLECFALGNPVPTIIWRRADGKPIAT---KARRHKSNGILEIPNFQQEDAGLYE 294

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P  ++   D +    + V   C+  G PKP   W+ N 
Sbjct: 295 CVAENSRGKNVAKGQLTFYAQ-PNWSQKINDIHVAIEENVFWECKANGRPKPTYRWLKNG 353

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           + L       +E G L IT V  +D+G Y C A NK G    S  L+V     I   P+ 
Sbjct: 354 EPLLTRDRIHIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSV-----IAVGPDF 408

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  K    W +G + +  E+E R   S D SL +
Sbjct: 409 SRTLLKRVTLVKVGGEVVIECKPKASP--KPVYTWKKGRDVLK-ENE-RITISEDGSLRI 464

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
              ++ D+G YTC A        +   L V+ P +     + + V   +  V+       
Sbjct: 465 INVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTKVMVPPSSMDVTVGESIVLPCQVTHD 524

Query: 429 QSLR----GHFRGYKVQTWTEKD------GEGSIRELIVNKGE---------STTTEVDK 469
            SL       F G  +    + D      G+ S  +L++   +            T VD+
Sbjct: 525 HSLNIVFTWSFNGRLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDR 584

Query: 470 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPE 528
              A+    R         GPP    +    E    T Q S    P   S   +  ++  
Sbjct: 585 LSAAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPVTMYVIQAR 635

Query: 529 QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
            P      + + +Q+V           +P + D  T +A + GL P  +Y          
Sbjct: 636 TP------FSVGWQAVN---------TVPELIDGKTFTATVVGLNPWVEYEFRTVAANVI 680

Query: 589 GDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F Y + +R
Sbjct: 681 GIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFR 740

Query: 643 RHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
            +     W    +     S  V  N+    F P+E+KV
Sbjct: 741 PYGK-MIWMLTVLASADASRYVFRNESVRPFSPFEVKV 777



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 119/475 (25%), Positives = 183/475 (38%), Gaps = 40/475 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  ++            SL+I +  +  D G Y C  +
Sbjct: 44  KKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDAGMYQCIAT 103

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFEC---KASGLPEPEIHWVHNG 163
           N  G   S    L       F       ++  + + +   C     SG  E    W+ N 
Sbjct: 104 NLFGTIVSREAKLQFAYLENFKPRTRSTVSVRQGQGMVLLCGPPAHSG--ELSYAWIFNE 161

Query: 164 KPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN-- 213
            P  Q   + RR V      + I  + KSD GNY C  TN+      LG     +  N  
Sbjct: 162 YPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNQKVLGPPTPLILRNDG 218

Query: 214 -VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILETG 270
            +  + P+I  + P+   T  G TV L C   G P P + W   + K +          G
Sbjct: 219 VMGEYEPKIEVQFPEMVPTAKGTTVKLECFALGNPVPTIIWRRADGKPIATKARRHKSNG 278

Query: 271 DLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN 330
            L+I +    D+G Y C A N  G     G LT     + + +  D  V   ++  + C 
Sbjct: 279 ILEIPNFQQEDAGLYECVAENSRGKNVAKGQLTFYAQPNWSQKINDIHVAIEENVFWECK 338

Query: 331 AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
           A   P  K +  WL+  EP+         Q    +L +T  +  D+G Y C A+ +   I
Sbjct: 339 ANGRP--KPTYRWLKNGEPLLTRDRIHIEQG---TLNITIVNLSDAGMYQCVAENKHGVI 393

Query: 391 EAQATLTVQVPLEAPSNFTLIQVIDAKK----AVVSWNP-VSPQSLRGHFRGYKVQTWTE 445
            + A L+V + +    + TL++ +   K     V+   P  SP+ +    +G  V    E
Sbjct: 394 FSSAELSV-IAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDVLKENE 452

Query: 446 K---DGEGSIRELIVNK---GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
           +     +GS+R + V K   G  T    + F  AS     V+        PPS +
Sbjct: 453 RITISEDGSLRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTKVMVPPSSM 507



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 117/302 (38%), Gaps = 32/302 (10%)

Query: 119 DLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D S L  P F  EP    F   +EE+ V   C+  G P+P I W  NG  +     + R 
Sbjct: 19  DDSTLHGPIFIQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIG-MDFRY 77

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            V    + I N  K+ D G Y C ATN  G +         A+        +   +V  G
Sbjct: 78  SVVEGSLLINNPNKTQDAGMYQCIATNLFGTIVSREAKLQFAYLENFKPRTRSTVSVRQG 137

Query: 234 KTVVLTCRVFGAP----KPEVNWIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYTC 287
           + +VL C   G P    +    WI N+        R+   ETG+L I  V  +D G YTC
Sbjct: 138 QGMVLLC---GPPAHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTC 194

Query: 288 FARNKLGTAQ-----------GSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              N +   +             G +   E       PE      G +    C A+ +P 
Sbjct: 195 VVTNTVTNQKVLGPPTPLILRNDGVMGEYEPKIEVQFPEMVPTAKGTTVKLECFALGNPV 254

Query: 337 LKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
              +I+W R   +PI   ++ R  +SN   L +    + D+G Y C A+       A+  
Sbjct: 255 --PTIIWRRADGKPI--ATKARRHKSNGI-LEIPNFQQEDAGLYECVAENSRGKNVAKGQ 309

Query: 396 LT 397
           LT
Sbjct: 310 LT 311



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 23/191 (12%)

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            RG  +GY+V+ W   D E + R+ I   G  T+T++     ++     V A+N A  GP 
Sbjct: 830  RGRIQGYEVKYWRHDDKEENARK-IRTIGNQTSTKITNLKGSALYHLAVKAYNSAGTGPS 888

Query: 492  SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
            S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 889  SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWSR 944

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
             +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P    
Sbjct: 945  QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIP--KI 992

Query: 606  DNVEGRGSTPN 616
             N   RG+ P+
Sbjct: 993  SNAYARGAGPS 1003


>gi|395824569|ref|XP_003785535.1| PREDICTED: contactin-4, partial [Otolemur garnettii]
          Length = 1013

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 195/724 (26%), Positives = 295/724 (40%), Gaps = 106/724 (14%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P   W + D  PI    R  + N    L I + +  D G Y C   N 
Sbjct: 230 VKLECFALGNPVPTITWRRADSKPIARKARRHKSN--GILEIPNFQQEDAGLYECVAENS 287

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P +  +   I+ A EE V +ECKA+G P+P   W+ NG+P+   
Sbjct: 288 RGKNVARG-QLTFYAQPNWIQKISDIHVAMEENVFWECKANGRPKPTYRWLKNGEPLLT- 345

Query: 170 PPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
               R ++    G   ITI NL  SD G Y C A N  G ++    +NV+A  P+ +   
Sbjct: 346 ----RDRIQIEQGTLNITIVNL--SDAGMYQCVAENKHGIIFSSAELNVIAVGPDFSRTL 399

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADS 282
               T+   G  VV+ C+   +PKP   W   +  L    R TI E G+L+I +V   D+
Sbjct: 400 LKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDVLRENERITISEDGNLRIVNVTKPDA 459

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   
Sbjct: 460 GSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFT 519

Query: 343 WLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           W      IDF+ +         Q +   L +       +G+Y C  QT +D + A A L 
Sbjct: 520 WSFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLI 579

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGE 449
           V+ P   P   T+ ++ D   A +SW P     SP ++      Y +Q  T         
Sbjct: 580 VRGPPGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFSVGWQAV 632

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTP 500
            ++ ELI   G++ T  V    P  +   R +A N    G PS         E +  VTP
Sbjct: 633 NTVPELI--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSERRRTEEALPEVTP 690

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
             V G   S        S   + W  V  E  NG   GY + ++     K+  +L  L  
Sbjct: 691 ANVSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFRPYG--KMSWMLTVLAS 741

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNV----EGRGST 614
            +D +    +   + P + + + +  +   G+G         PF  P  V    E     
Sbjct: 742 -ADASRYVFRNESVRPFSPFEVKVGVFNNKGEG---------PFSPPTVVYSADEEPTKP 791

Query: 615 PNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPY 674
           P N+     +  +IE         +FW                   +  +  N+   Q Y
Sbjct: 792 PANIFARSLSATDIE---------VFW-------------------ASPLEKNRGRIQGY 823

Query: 675 EIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 734
           E+K    W  +D E + R+ I   G  T+T++     ++     V A+N A  GP S  +
Sbjct: 824 EVKY---WRHEDKEENARK-IRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPSSATV 879

Query: 735 SFVT 738
           +  T
Sbjct: 880 NVTT 883



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 161/638 (25%), Positives = 239/638 (37%), Gaps = 85/638 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V+ PE +  
Sbjct: 165 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPT 224

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   + KPI++     RR      + I N ++ D G Y 
Sbjct: 225 AKGATVKLECFALGNPVPTITWRRADSKPIAR---KARRHKSNGILEIPNFQQEDAGLYE 281

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P   +   D +    + V   C+  G PKP   W+ N 
Sbjct: 282 CVAENSRGKNVARGQLTFYAQ-PNWIQKISDIHVAMEENVFWECKANGRPKPTYRWLKNG 340

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           + L       +E G L IT V  +D+G Y C A NK G    S  L V     I   P+ 
Sbjct: 341 EPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAENKHGIIFSSAELNV-----IAVGPDF 395

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  K    W +G + +  E+E R   S D +L +
Sbjct: 396 SRTLLKRVTLVKVGGEVVIECKPKASP--KPVYTWKKGRDVLR-ENE-RITISEDGNLRI 451

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
              ++ D+G YTC A        +   L V+ P       + + V   +  V+       
Sbjct: 452 VNVTKPDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHD 511

Query: 429 QSL----RGHFRGYKVQTWTEKD------GEGSIRELIVNKGE---------STTTEVDK 469
            SL       F G+ +    + D      G+ S  +L++   +            T VDK
Sbjct: 512 HSLDIVFTWSFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDK 571

Query: 470 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPE 528
              A+    R         GPP    +    E    T Q S    P   S   +  ++  
Sbjct: 572 LSAAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQAR 622

Query: 529 QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
            P      + + +Q+V           +P + D  T +A + GL P  +Y          
Sbjct: 623 TP------FSVGWQAVN---------TVPELIDGKTFTATVVGLNPWVEYEFRTVAANVI 667

Query: 589 GDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F Y + +R
Sbjct: 668 GIGEPSRPSERRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFR 727

Query: 643 RHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
            +    +W    +     S  V  N+    F P+E+KV
Sbjct: 728 PYGK-MSWMLTVLASADASRYVFRNESVRPFSPFEVKV 764



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 142/369 (38%), Gaps = 30/369 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  ++            SL+I +  +  D G+Y C  +
Sbjct: 31  KKVKLNCEVKGNPKPHIRWKLNGTDVDMGMDFRYSVVEGSLLINNPNKTQDAGTYQCIAT 90

Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVHN 162
           N  G   S    L       F T     ++    + +   C   G P    E    W+ N
Sbjct: 91  NSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLC---GPPPHSGELSYAWIFN 147

Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN- 213
             P  Q   + RR V      + I  + KSD GNY C  TN+      LG     +  N 
Sbjct: 148 EYPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRND 204

Query: 214 --VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILET 269
             +  + P+I  + P+   T  G TV L C   G P P + W   + K +          
Sbjct: 205 GVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNPVPTITWRRADSKPIARKARRHKSN 264

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I +    D+G Y C A N  G     G LT     +   +  D  V   ++  + C
Sbjct: 265 GILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKISDIHVAMEENVFWEC 324

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   P  K +  WL+  EP+        +Q    +L +T  +  D+G Y C A+ +   
Sbjct: 325 KANGRP--KPTYRWLKNGEPLLTRDR---IQIEQGTLNITIVNLSDAGMYQCVAENKHGI 379

Query: 390 IEAQATLTV 398
           I + A L V
Sbjct: 380 IFSSAELNV 388



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 116/303 (38%), Gaps = 34/303 (11%)

Query: 119 DLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D   L  P F  EP    F   +EE+ V   C+  G P+P I W  NG  +     + R 
Sbjct: 6   DDYTLHGPIFIQEPSNLMFPLDSEEKKVKLNCEVKGNPKPHIRWKLNGTDVDMG-MDFRY 64

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            V    + I N  K+ D G Y C ATNS G +         A+        +   +V  G
Sbjct: 65  SVVEGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRG 124

Query: 234 KTVVLTCRVFGAPKPEVN-----WIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYT 286
           + +VL C     P P        WI N+        R+   ETG+L I  V  +D G YT
Sbjct: 125 QGMVLLC----GPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYT 180

Query: 287 CFARNKLGT-----------AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           C   N +              +  G +   E       PE      G +    C A+ +P
Sbjct: 181 CVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNP 240

Query: 336 SLKLSIVWLRG-SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
               +I W R  S+PI  ++  R  +SN   L +    + D+G Y C A+       A+ 
Sbjct: 241 V--PTITWRRADSKPIARKA--RRHKSNGI-LEIPNFQQEDAGLYECVAENSRGKNVARG 295

Query: 395 TLT 397
            LT
Sbjct: 296 QLT 298



 Score = 43.1 bits (100), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 25/224 (11%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSP-QSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
           P + P+N    + + A    V W   SP +  RG  +GY+V+ W  +D E + R+ I   
Sbjct: 788 PTKPPANI-FARSLSATDIEVFW--ASPLEKNRGRIQGYEVKYWRHEDKEENARK-IRTV 843

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT----PEGVPGTVQSLEAIPL 515
           G  T+T++     ++     V A+N A  GP S  ++  T    P   PG +    +   
Sbjct: 844 GNQTSTKITNLKGSALYHLAVKAYNSAGTGPSSATVNVTTRKPPPSQPPGNIIWNSS--- 900

Query: 516 GSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLE 573
             S   L W  VK       + GYK+ Y+  + +           + +   TS +L+ L 
Sbjct: 901 -DSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS--------VIETNKTSVELS-LP 950

Query: 574 PSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNN 617
               Y I +  ++  GDG+ S+ +  +P  +     G G++ +N
Sbjct: 951 FDEDYIIEIKPFSDGGDGSSSEQI-RIPKISNAYARGSGASTSN 993


>gi|426257392|ref|XP_004022311.1| PREDICTED: neural cell adhesion molecule L1 isoform 2 [Ovis aries]
          Length = 1247

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 136/471 (28%), Positives = 213/471 (45%), Gaps = 20/471 (4%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L + +V   D G Y 
Sbjct: 248 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLNVGEEDDGEYR 306

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G  + ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 307 CLAENSLGSDR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 365

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + NL+ SDT    C   N  G +  + Y+ V+    +I  
Sbjct: 366 IPVEELGKDQKYRIHHGALVLSNLQPSDTVAQ-CEPRNRHGLLLANAYIYVVELPAKILT 424

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
              + Y  V G T  L C+ FGAP P V W+  + +  L   R+     G L I D+   
Sbjct: 425 PDNETYMAVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNGTLGIRDLQAN 484

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T I   P     + G    F C A  DPSL+ S
Sbjct: 485 DTGHYFCQAANDQSNVTIVANLQVKDATRIMQGPRSTIEKRGSRVMFTCQASFDPSLQHS 544

Query: 341 IVWLRGSEPIDFE----SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA-T 395
             W R  + +D +    S+  F++  D  L +      D G Y+C A T+LD +E+QA  
Sbjct: 545 TTWRR--DALDLQELGDSDKYFIE--DERLVIHSLDYSDQGNYSCVASTKLDMVESQAEL 600

Query: 396 LTVQVPLEAPS-NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRE 454
           L V  P   P    +   ++   +  +SW+P    +       Y ++   ++        
Sbjct: 601 LVVGSPGPVPQLELSDRHLLKQSQVRLSWSPADDHN--APIEKYDIEFEDKEMAPEKWYS 658

Query: 455 LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVP 504
           L    G  T+T + K  P      RV A N    G PS +  + VTPE  P
Sbjct: 659 LGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPDSETVVTPEAAP 708



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 150/572 (26%), Positives = 239/572 (41%), Gaps = 68/572 (11%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--NLRKSDTGN 194
           A + + +  EC A G P P I W+    P+    P  R     +  T++  N+ + D G 
Sbjct: 249 ALQGQPLVLECIAEGFPTPTIKWLRPSGPM----PADRVTYQNHNKTLQLLNVGEEDDGE 304

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           Y C A NSLG      YV V A AP     P+      G+T  L C+V G P+PEV W  
Sbjct: 305 YRCLAENSLGSDRHAYYVTVEA-APYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRI 363

Query: 255 NQ---KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH-- 309
           N    +EL   +   +  G L ++++  +D+    C  RN+ G    +  + V E     
Sbjct: 364 NGIPVEELGKDQKYRIHHGALVLSNLQPSDTVA-QCEPRNRHGLLLANAYIYVVELPAKI 422

Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
           +T   E Y    G +A   C A   P    S+ WL        + E RF    + +L + 
Sbjct: 423 LTPDNETYMAVQGSTAYLLCKAFGAPVP--SVQWLDREGKTVLQDE-RFFPYTNGTLGIR 479

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ----VIDAKKAVVSWNP 425
                D+G Y C+A  +      Q+ +T+   L+      ++Q     I+ + + V +  
Sbjct: 480 DLQANDTGHYFCQAAND------QSNVTIVANLQVKDATRIMQGPRSTIEKRGSRVMF-- 531

Query: 426 VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNG 485
               + +  F      + T +     ++EL     +    E ++ V  S +++      G
Sbjct: 532 ----TCQASFDPSLQHSTTWRRDALDLQEL--GDSDKYFIEDERLVIHSLDYSD----QG 581

Query: 486 AYNGPPSEIISFVTPE------GVPGTVQSLEAIP---LGSSAFYLKWVKPEQPNGVLMG 536
            Y+   S  +  V  +      G PG V  LE      L  S   L W   +  N  +  
Sbjct: 582 NYSCVASTKLDMVESQAELLVVGSPGPVPQLELSDRHLLKQSQVRLSWSPADDHNAPIEK 641

Query: 537 YKIKYQSVKGTKVGP----LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 592
           Y I+++     ++ P     L ++P   + T+T+ KL+   P   Y   +    K G G 
Sbjct: 642 YDIEFED---KEMAPEKWYSLGKVP--GNQTSTTLKLS---PYVHYTFRVTAINKYGPGE 693

Query: 593 ESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
            S     V      P KNP +V+G G+  NN++I+W  +  ++ NAP  +YR+ WR    
Sbjct: 694 PSPDSETVVTPEAAPEKNPVDVKGEGNETNNMIITWKPLRWMDWNAPQVQYRVQWRPQKM 753

Query: 647 GEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
             AW +  V D     LV++N  TF PYEIKV
Sbjct: 754 QGAWQEQIVSD---PFLVVSNTSTFVPYEIKV 782



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 142/587 (24%), Positives = 231/587 (39%), Gaps = 60/587 (10%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIW-SKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           +A++     L C   G P+P   W  ++G  +   +R      G +L I+ ++ +D G Y
Sbjct: 431 MAVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNG-TLGIRDLQANDTGHY 489

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP--EPEIHWV 160
            C+ +N      +   +L V  A      P          V F C+AS  P  +    W 
Sbjct: 490 FCQAANDQSNV-TIVANLQVKDATRIMQGPRSTIEKRGSRVMFTCQASFDPSLQHSTTWR 548

Query: 161 HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
            +   + +   + +  +   R+ I +L  SD GNY C A+  L  V     + V+     
Sbjct: 549 RDALDLQELGDSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDMVESQAELLVVGSPGP 608

Query: 221 ITEAP-KDEYTVDGKTVVLT---CRVFGAPKPEVNWIHNQKELTGGRYTILET--GDLKI 274
           + +    D + +    V L+        AP  + +     KE+   ++  L    G+   
Sbjct: 609 VPQLELSDRHLLKQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTS 668

Query: 275 TDVAFADSGEYT--CFARNKLGTAQGS--GSLTVKEHTHITDQPEDYEVEAGQSAT---- 326
           T +  +    YT    A NK G  + S      V         P D + E  ++      
Sbjct: 669 TTLKLSPYVHYTFRVTAINKYGPGEPSPDSETVVTPEAAPEKNPVDVKGEGNETNNMIIT 728

Query: 327 ---FRCNAVSDPSLKLSIVW----LRGSEPIDFESEPRFVQSNDYSL--------TVTKS 371
               R    + P ++  + W    ++G+      S+P  V SN  +         TV   
Sbjct: 729 WKPLRWMDWNAPQVQYRVQWRPQKMQGAWQEQIVSDPFLVVSNTSTFVPYEIKVQTVNSQ 788

Query: 372 SELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
            +    Q T     E D+ +A       +PL  P     ++ +++   +V W  V P  +
Sbjct: 789 GKGPEPQITIGYSGE-DYPQA-------IPLLEP-----VKALNSSTVLVRWQSVDPAQV 835

Query: 432 RGHFRGYKVQTWTE-KDGEGSIREL----IVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
           +GH RGY V  W E    + S R +    +V    +T+  +    P S     V AFNG 
Sbjct: 836 KGHLRGYNVTYWWEGSQRKHSKRHVHKGHVVVPANTTSAILGGLQPYSSYRVEVQAFNGR 895

Query: 487 YNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVK- 545
             GP S + +F TPEGVPG  ++L       ++  L W  P   NGVL GY + YQ +  
Sbjct: 896 GLGPASGM-TFNTPEGVPGHPEALHLECQSDTSLLLHWQPPLSHNGVLTGYVLSYQPLND 954

Query: 546 GTKVGPLLERLPY-ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           G+K     E+L + + DP   +  L  L P  +YR  L   T+ G G
Sbjct: 955 GSK-----EQLSFDLPDPELRTHNLTNLSPRLRYRFQLQATTREGPG 996



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/338 (24%), Positives = 141/338 (41%), Gaps = 33/338 (9%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLII----K 92
           ++ V      V L C   G P  Q  W++DG+   P +     ++Q  +  S  I     
Sbjct: 38  RRVVVFPTDDVSLKCEASGKPEVQFRWTRDGILFKPKEELGMIVNQAPHSGSFSITGNSS 97

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
           +   S QG Y C  SN +G A S+ I L     P +   TV+P  +   E E+V   C  
Sbjct: 98  NFAQSFQGIYRCFASNKLGTAMSHEIQLMAEGTPKWPKETVKP--VEVEEGESVILPCHP 155

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 156 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 213

Query: 205 YVYK---DVYV----NVLAHAPEI---TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K   D+ V    +++   P +   T +      + G+ +VL C   G P P + W+ 
Sbjct: 214 IIQKEPIDLRVKATNSMMDRKPHLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 273

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++ +V   D GEY C A N LG+ + +  +TV+   +   +
Sbjct: 274 PSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSDRHAYYVTVEAAPYWLHK 333

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID 351
           P+ +    G++A   C     P  +  + W     P++
Sbjct: 334 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVE 369



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 115/290 (39%), Gaps = 19/290 (6%)

Query: 415  DAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
            +    +++W P+           Y+VQ W  +  +G+ +E IV+      +    FVP  
Sbjct: 721  ETNNMIITWKPLRWMDWNAPQVQYRVQ-WRPQKMQGAWQEQIVSDPFLVVSNTSTFVPYE 779

Query: 475  KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAI-PLGSSAFYLKW--VKPEQPN 531
                +V   N    GP  +I    + E  P  +  LE +  L SS   ++W  V P Q  
Sbjct: 780  ---IKVQTVNSQGKGPEPQITIGYSGEDYPQAIPLLEPVKALNSSTVLVRWQSVDPAQVK 836

Query: 532  GVLMGYKIKY--QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
            G L GY + Y  +  +       + +   +    TTSA L GL+P + YR+ +  +   G
Sbjct: 837  GHLRGYNVTYWWEGSQRKHSKRHVHKGHVVVPANTTSAILGGLQPYSSYRVEVQAFNGRG 896

Query: 590  DGAESKYLFYVPF---KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
             G  S   F  P     +P+ +     +  +L++ W   P + HN     Y + ++  N 
Sbjct: 897  LGPASGMTFNTPEGVPGHPEALHLECQSDTSLLLHW--QPPLSHNGVLTGYVLSYQPLND 954

Query: 647  GEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
            G    +    D    EL   N     P   Y  ++  T  E  GE  IRE
Sbjct: 955  GS--KEQLSFDLPDPELRTHNLTNLSPRLRYRFQLQATTREGPGEAIIRE 1002



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 115/278 (41%), Gaps = 41/278 (14%)

Query: 141 ETVTFECKASGLPEPEIHWVHNG---KP-------ISQAPPNPRRKVGPNRITIENLRKS 190
           + V+ +C+ASG PE +  W  +G   KP       ++QAP +    +  N     N  +S
Sbjct: 46  DDVSLKCEASGKPEVQFRWTRDGILFKPKEELGMIVNQAPHSGSFSITGNS---SNFAQS 102

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHA----PEITEAPKDEYTVDGKTVVLTCRVFGAP 246
             G Y C A+N LG       + ++A      P+ T  P +    +G++V+L C    + 
Sbjct: 103 FQGIYRCFASNKLGTAMSH-EIQLMAEGTPKWPKETVKPVE--VEEGESVILPCHPPPSA 159

Query: 247 KPEVNWIHNQKEL---TGGRYTILETGDLKITDVAFADS-GEYTCFARN----------- 291
           +P   +  N K L      R T+ + G+L   +V  +D+  +Y C A             
Sbjct: 160 EPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEP 219

Query: 292 -KLGTAQGSGSLTVKEHTHITDQPEDYEVE-AGQSATFRCNAVSDPSLKLSIVWLRGSEP 349
             L     +  +  K H         + V   GQ     C A   P+   +I WLR S P
Sbjct: 220 IDLRVKATNSMMDRKPHLLFPTNSSSHLVALQGQPLVLECIAEGFPT--PTIKWLRPSGP 277

Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
           +   ++    Q+++ +L +    E D G+Y C A+  L
Sbjct: 278 M--PADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSL 313


>gi|426257394|ref|XP_004022312.1| PREDICTED: neural cell adhesion molecule L1 isoform 3 [Ovis aries]
          Length = 1252

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 136/471 (28%), Positives = 213/471 (45%), Gaps = 20/471 (4%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L + +V   D G Y 
Sbjct: 253 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLNVGEEDDGEYR 311

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G  + ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 312 CLAENSLGSDR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 370

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + NL+ SDT    C   N  G +  + Y+ V+    +I  
Sbjct: 371 IPVEELGKDQKYRIHHGALVLSNLQPSDTVAQ-CEPRNRHGLLLANAYIYVVELPAKILT 429

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
              + Y  V G T  L C+ FGAP P V W+  + +  L   R+     G L I D+   
Sbjct: 430 PDNETYMAVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNGTLGIRDLQAN 489

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T I   P     + G    F C A  DPSL+ S
Sbjct: 490 DTGHYFCQAANDQSNVTIVANLQVKDATRIMQGPRSTIEKRGSRVMFTCQASFDPSLQHS 549

Query: 341 IVWLRGSEPIDFE----SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA-T 395
             W R  + +D +    S+  F++  D  L +      D G Y+C A T+LD +E+QA  
Sbjct: 550 TTWRR--DALDLQELGDSDKYFIE--DERLVIHSLDYSDQGNYSCVASTKLDMVESQAEL 605

Query: 396 LTVQVPLEAPS-NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRE 454
           L V  P   P    +   ++   +  +SW+P    +       Y ++   ++        
Sbjct: 606 LVVGSPGPVPQLELSDRHLLKQSQVRLSWSPADDHN--APIEKYDIEFEDKEMAPEKWYS 663

Query: 455 LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVP 504
           L    G  T+T + K  P      RV A N    G PS +  + VTPE  P
Sbjct: 664 LGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPDSETVVTPEAAP 713



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 150/572 (26%), Positives = 239/572 (41%), Gaps = 68/572 (11%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--NLRKSDTGN 194
           A + + +  EC A G P P I W+    P+    P  R     +  T++  N+ + D G 
Sbjct: 254 ALQGQPLVLECIAEGFPTPTIKWLRPSGPM----PADRVTYQNHNKTLQLLNVGEEDDGE 309

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           Y C A NSLG      YV V A AP     P+      G+T  L C+V G P+PEV W  
Sbjct: 310 YRCLAENSLGSDRHAYYVTVEA-APYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRI 368

Query: 255 NQ---KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH-- 309
           N    +EL   +   +  G L ++++  +D+    C  RN+ G    +  + V E     
Sbjct: 369 NGIPVEELGKDQKYRIHHGALVLSNLQPSDTVA-QCEPRNRHGLLLANAYIYVVELPAKI 427

Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
           +T   E Y    G +A   C A   P    S+ WL        + E RF    + +L + 
Sbjct: 428 LTPDNETYMAVQGSTAYLLCKAFGAPVP--SVQWLDREGKTVLQDE-RFFPYTNGTLGIR 484

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ----VIDAKKAVVSWNP 425
                D+G Y C+A  +      Q+ +T+   L+      ++Q     I+ + + V +  
Sbjct: 485 DLQANDTGHYFCQAAND------QSNVTIVANLQVKDATRIMQGPRSTIEKRGSRVMF-- 536

Query: 426 VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNG 485
               + +  F      + T +     ++EL     +    E ++ V  S +++      G
Sbjct: 537 ----TCQASFDPSLQHSTTWRRDALDLQEL--GDSDKYFIEDERLVIHSLDYSD----QG 586

Query: 486 AYNGPPSEIISFVTPE------GVPGTVQSLEAIP---LGSSAFYLKWVKPEQPNGVLMG 536
            Y+   S  +  V  +      G PG V  LE      L  S   L W   +  N  +  
Sbjct: 587 NYSCVASTKLDMVESQAELLVVGSPGPVPQLELSDRHLLKQSQVRLSWSPADDHNAPIEK 646

Query: 537 YKIKYQSVKGTKVGP----LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 592
           Y I+++     ++ P     L ++P   + T+T+ KL+   P   Y   +    K G G 
Sbjct: 647 YDIEFED---KEMAPEKWYSLGKVP--GNQTSTTLKLS---PYVHYTFRVTAINKYGPGE 698

Query: 593 ESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
            S     V      P KNP +V+G G+  NN++I+W  +  ++ NAP  +YR+ WR    
Sbjct: 699 PSPDSETVVTPEAAPEKNPVDVKGEGNETNNMIITWKPLRWMDWNAPQVQYRVQWRPQKM 758

Query: 647 GEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
             AW +  V D     LV++N  TF PYEIKV
Sbjct: 759 QGAWQEQIVSD---PFLVVSNTSTFVPYEIKV 787



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 142/587 (24%), Positives = 231/587 (39%), Gaps = 60/587 (10%)

Query: 44   VALRNKKVELFCIFGGTPLPQTIW-SKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
            +A++     L C   G P+P   W  ++G  +   +R      G +L I+ ++ +D G Y
Sbjct: 436  MAVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNG-TLGIRDLQANDTGHY 494

Query: 103  TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP--EPEIHWV 160
             C+ +N      +   +L V  A      P          V F C+AS  P  +    W 
Sbjct: 495  FCQAANDQSNV-TIVANLQVKDATRIMQGPRSTIEKRGSRVMFTCQASFDPSLQHSTTWR 553

Query: 161  HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
             +   + +   + +  +   R+ I +L  SD GNY C A+  L  V     + V+     
Sbjct: 554  RDALDLQELGDSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDMVESQAELLVVGSPGP 613

Query: 221  ITEAP-KDEYTVDGKTVVLT---CRVFGAPKPEVNWIHNQKELTGGRYTILET--GDLKI 274
            + +    D + +    V L+        AP  + +     KE+   ++  L    G+   
Sbjct: 614  VPQLELSDRHLLKQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTS 673

Query: 275  TDVAFADSGEYT--CFARNKLGTAQGS--GSLTVKEHTHITDQPEDYEVEAGQSAT---- 326
            T +  +    YT    A NK G  + S      V         P D + E  ++      
Sbjct: 674  TTLKLSPYVHYTFRVTAINKYGPGEPSPDSETVVTPEAAPEKNPVDVKGEGNETNNMIIT 733

Query: 327  ---FRCNAVSDPSLKLSIVW----LRGSEPIDFESEPRFVQSNDYSL--------TVTKS 371
                R    + P ++  + W    ++G+      S+P  V SN  +         TV   
Sbjct: 734  WKPLRWMDWNAPQVQYRVQWRPQKMQGAWQEQIVSDPFLVVSNTSTFVPYEIKVQTVNSQ 793

Query: 372  SELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
             +    Q T     E D+ +A       +PL  P     ++ +++   +V W  V P  +
Sbjct: 794  GKGPEPQITIGYSGE-DYPQA-------IPLLEP-----VKALNSSTVLVRWQSVDPAQV 840

Query: 432  RGHFRGYKVQTWTE-KDGEGSIREL----IVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
            +GH RGY V  W E    + S R +    +V    +T+  +    P S     V AFNG 
Sbjct: 841  KGHLRGYNVTYWWEGSQRKHSKRHVHKGHVVVPANTTSAILGGLQPYSSYRVEVQAFNGR 900

Query: 487  YNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVK- 545
              GP S + +F TPEGVPG  ++L       ++  L W  P   NGVL GY + YQ +  
Sbjct: 901  GLGPASGM-TFNTPEGVPGHPEALHLECQSDTSLLLHWQPPLSHNGVLTGYVLSYQPLND 959

Query: 546  GTKVGPLLERLPY-ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            G+K     E+L + + DP   +  L  L P  +YR  L   T+ G G
Sbjct: 960  GSK-----EQLSFDLPDPELRTHNLTNLSPRLRYRFQLQATTREGPG 1001



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 161/691 (23%), Positives = 260/691 (37%), Gaps = 85/691 (12%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            L C   G P P+  W  +G+P+     +   RI  G    +L++ +++ SD  +  CE  
Sbjct: 352  LDCQVQGRPQPEVTWRINGIPVEELGKDQKYRIHHG----ALVLSNLQPSDTVA-QCEPR 406

Query: 108  N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
            N  G+  A +Y I +  L A   T + E   A +  T    CKA G P P + W+   GK
Sbjct: 407  NRHGLLLANAY-IYVVELPAKILTPDNETYMAVQGSTAYLLCKAFGAPVPSVQWLDREGK 465

Query: 165  PISQAPPNPRRKVGP---NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
             + Q       +  P     + I +L+ +DTG+Y C A N    V   +  N+ +  A  
Sbjct: 466  TVLQ-----DERFFPYTNGTLGIRDLQANDTGHYFCQAANDQSNV--TIVANLQVKDATR 518

Query: 221  ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFA 280
            I + P+      G  V+ TC+    P        + +  T  R   L+  +L  +D  F 
Sbjct: 519  IMQGPRSTIEKRGSRVMFTCQASFDP--------SLQHSTTWRRDALDLQELGDSDKYFI 570

Query: 281  DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            +       + +   + QG+ S        + +   +  V        +        LK S
Sbjct: 571  EDERLVIHSLDY--SDQGNYSCVASTKLDMVESQAELLVVGSPGPVPQLELSDRHLLKQS 628

Query: 341  IVWLRGS---------EPIDFESEPRFVQSND-YSLTVTKSSELDSG-------QYTCRA 383
             V L  S         E  D E E + +     YSL     ++  +         YT R 
Sbjct: 629  QVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYVHYTFRV 688

Query: 384  QTELDFIEAQAT---LTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSPQSLRG 433
                 +   + +    TV  P  AP        +D K         +++W P+       
Sbjct: 689  TAINKYGPGEPSPDSETVVTPEAAPEK----NPVDVKGEGNETNNMIITWKPLRWMDWNA 744

Query: 434  HFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
                Y+VQ W  +  +G+ +E IV+      +    FVP      +V   N    GP  +
Sbjct: 745  PQVQYRVQ-WRPQKMQGAWQEQIVSDPFLVVSNTSTFVPYE---IKVQTVNSQGKGPEPQ 800

Query: 494  IISFVTPEGVPGTVQSLEAI-PLGSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVKGTK 548
            I    + E  P  +  LE +  L SS   ++W  V P Q  G L GY + Y  +  +   
Sbjct: 801  ITIGYSGEDYPQAIPLLEPVKALNSSTVLVRWQSVDPAQVKGHLRGYNVTYWWEGSQRKH 860

Query: 549  VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF---KNP 605
                + +   +    TTSA L GL+P + YR+ +  +   G G  S   F  P     +P
Sbjct: 861  SKRHVHKGHVVVPANTTSAILGGLQPYSSYRVEVQAFNGRGLGPASGMTFNTPEGVPGHP 920

Query: 606  DNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVL 665
            + +     +  +L++ W   P + HN     Y + ++  N G    +    D    EL  
Sbjct: 921  EALHLECQSDTSLLLHW--QPPLSHNGVLTGYVLSYQPLNDGS--KEQLSFDLPDPELRT 976

Query: 666  ANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
             N     P   Y  ++  T  E  GE  IRE
Sbjct: 977  HNLTNLSPRLRYRFQLQATTREGPGEAIIRE 1007



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/338 (24%), Positives = 141/338 (41%), Gaps = 33/338 (9%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLII----K 92
           ++ V      V L C   G P  Q  W++DG+   P +     ++Q  +  S  I     
Sbjct: 43  RRVVVFPTDDVSLKCEASGKPEVQFRWTRDGILFKPKEELGMIVNQAPHSGSFSITGNSS 102

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
           +   S QG Y C  SN +G A S+ I L     P +   TV+P  +   E E+V   C  
Sbjct: 103 NFAQSFQGIYRCFASNKLGTAMSHEIQLMAEGTPKWPKETVKP--VEVEEGESVILPCHP 160

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+++   I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 161 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 218

Query: 205 YVYK---DVYV----NVLAHAPEI---TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K   D+ V    +++   P +   T +      + G+ +VL C   G P P + W+ 
Sbjct: 219 IIQKEPIDLRVKATNSMMDRKPHLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 278

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++ +V   D GEY C A N LG+ + +  +TV+   +   +
Sbjct: 279 PSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSDRHAYYVTVEAAPYWLHK 338

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID 351
           P+ +    G++A   C     P  +  + W     P++
Sbjct: 339 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVE 374



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 122/298 (40%), Gaps = 42/298 (14%)

Query: 122 VLAAPYFTVE-PEFINAAEEETVTFECKASGLPEPEIHWVHNG---KP-------ISQAP 170
           V+  P  T + P  +     + V+ +C+ASG PE +  W  +G   KP       ++QAP
Sbjct: 31  VMEPPIITEQSPRRVVVFPTDDVSLKCEASGKPEVQFRWTRDGILFKPKEELGMIVNQAP 90

Query: 171 PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA----PEITEAPK 226
            +    +  N     N  +S  G Y C A+N LG       + ++A      P+ T  P 
Sbjct: 91  HSGSFSITGNS---SNFAQSFQGIYRCFASNKLGTAMSH-EIQLMAEGTPKWPKETVKPV 146

Query: 227 DEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL---TGGRYTILETGDLKITDVAFADS- 282
           +    +G++V+L C    + +P   +  N K L      R T+ + G+L   +V  +D+ 
Sbjct: 147 E--VEEGESVILPCHPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNH 204

Query: 283 GEYTCFARN------------KLGTAQGSGSLTVKEHTHITDQPEDYEVE-AGQSATFRC 329
            +Y C A               L     +  +  K H         + V   GQ     C
Sbjct: 205 SDYICHAHFPGTRTIIQKEPIDLRVKATNSMMDRKPHLLFPTNSSSHLVALQGQPLVLEC 264

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            A   P+   +I WLR S P+   ++    Q+++ +L +    E D G+Y C A+  L
Sbjct: 265 IAEGFPT--PTIKWLRPSGPM--PADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSL 318


>gi|301606492|ref|XP_002932857.1| PREDICTED: contactin-1-like [Xenopus (Silurana) tropicalis]
          Length = 1005

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 193/747 (25%), Positives = 307/747 (41%), Gaps = 107/747 (14%)

Query: 22  TGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS 81
           T  S    R+ P    V  K   AL+++ V L C   G P+P   W K    +  S  IS
Sbjct: 217 TDTSEKPKRYTPVIN-VKFKDTRALKDQNVTLECFALGNPIPVITWRKTNEAMPASAEIS 275

Query: 82  QGNYGKSLIIKHVEFSDQGSYTCEVSN--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAE 139
               G  L I +++  D+G+Y CE  N  G+   K+Y   + V   P +    E IN  E
Sbjct: 276 MS--GAVLKIFNIQPEDEGTYECEAKNIKGMDTHKAY---VYVEGVPEWV---EHINDTE 327

Query: 140 EET---VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
            +    + + C A G P+P I W+ NG              G   +    L   D G Y 
Sbjct: 328 RDIGSDLHWACVAKGKPQPSIRWLKNGA-----------SYGKGDLIKRGLTLEDAGMYQ 376

Query: 197 CNATNSLGYVYKDVYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           C A N  G +Y +  + +LA AP  E T   K      G  V++ C+   APK + +W  
Sbjct: 377 CIAENMHGIIYANAELKILALAPTFEFTPMRKKVLAAKGGRVIIECKPKAAPKAKFSWSK 436

Query: 255 NQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
             + L    R +I + G L+I ++   D G YTCFA N  G A  +G L+V   T IT  
Sbjct: 437 GTELLINSSRVSIWDDGSLEILNITKLDEGSYTCFAENDRGKANSTGVLSVTAATKITLA 496

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP----RFVQSNDYSLTVT 369
           P + +V  G++AT +C+A  DP+L L+ +W     PI+F+ E     R ++++  S  V 
Sbjct: 497 PSNADVTVGENATMQCHASHDPTLDLTFIWTLNGFPIEFDKEDGHYERAIRNDVGSELVI 556

Query: 370 KSSEL-DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWN---- 424
           K+++L  +G+YTC AQT +D   A A L V+ P   P    + ++ D     ++W+    
Sbjct: 557 KNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGVRVEEIRDT-SVKLTWSSGTD 615

Query: 425 ---PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 481
              P+S  +++   +    + W +   E    E     G          +P      RV 
Sbjct: 616 NHQPISKYNIQA--KNILSEDWKDVKTENPNIE-----GNMEMARAIDLIPWMDYEFRVT 668

Query: 482 AFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSS--AFYLKWVKPEQPNGVLMGYKI 539
           A N    G PS     +  EG    V   E    G S     + W    QP      Y  
Sbjct: 669 ATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGSNRELTVTW----QPLSREYHYGD 724

Query: 540 KYQSVKGTKVGPLLE-RLPYISDPTTTS--AKLAGLEPSTKYRIHLAGYTKAGDGAESKY 596
            +  V   K+    E R   +++P +     K   + P+T++++ +  + K G+G  S  
Sbjct: 725 GFGYVVAFKLFNYREWRKVIVTNPESGHYVHKDDTITPATQFQVKVKAFNKVGEGPYSST 784

Query: 597 LFY-----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWN 651
           +       VP + P  +     + + + ++W   P  E +   ++ R +WR         
Sbjct: 785 VVIYSAEDVPIEAPTAIVYNILSSSEVSVAW--HPVYEKSIEGYQVR-YWRT-------- 833

Query: 652 QDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVP 711
                                            +D E +   + V K    TT ++  +P
Sbjct: 834 ---------------------------------QDKEAAAHRVQV-KASDITTRLEGLLP 859

Query: 712 ASKNFARVLAFNGAYNGPPSEIISFVT 738
            +     V AFN A +GPPS +I+F+T
Sbjct: 860 DTHYNLEVRAFNSAGDGPPSRVITFLT 886



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 143/355 (40%), Gaps = 37/355 (10%)

Query: 72  VPINPSDR--ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA----- 124
           V I+P +R  ++Q N   +L I  VE SD+G+Y+C VS+       +S  +S+L      
Sbjct: 163 VFISPDNRRFVTQAN--GNLYIAKVEQSDRGNYSCFVSSPSVTKSVFSKFISLLPQTDTS 220

Query: 125 ------APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
                  P   V+ +   A +++ VT EC A G P P I W    + +   P +    + 
Sbjct: 221 EKPKRYTPVINVKFKDTRALKDQNVTLECFALGNPIPVITWRKTNEAM---PASAEISMS 277

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVL 238
              + I N++  D G Y C A N  G      YV V    PE  E   D     G  +  
Sbjct: 278 GAVLKIFNIQPEDEGTYECEAKNIKGMDTHKAYVYVEG-VPEWVEHINDTERDIGSDLHW 336

Query: 239 TCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
            C   G P+P + W+ N     G  Y     GDL    +   D+G Y C A N  G    
Sbjct: 337 ACVAKGKPQPSIRWLKN-----GASYG---KGDLIKRGLTLEDAGMYQCIAENMHGIIYA 388

Query: 299 SGSLTVKEHT---HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE 355
           +  L +         T   +      G      C   + P  K S  W +G+E +   S 
Sbjct: 389 NAELKILALAPTFEFTPMRKKVLAAKGGRVIIECKPKAAPKAKFS--WSKGTELLINSS- 445

Query: 356 PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSN 407
            R    +D SL +   ++LD G YTC A+ +     +   L+V    +   APSN
Sbjct: 446 -RVSIWDDGSLEILNITKLDEGSYTCFAENDRGKANSTGVLSVTAATKITLAPSN 499



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 148/636 (23%), Positives = 259/636 (40%), Gaps = 88/636 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH-VEFSDQGSYTCEVSNGVGEA 113
           C+  G P P   W K+G            +YGK  +IK  +   D G Y C   N  G  
Sbjct: 338 CVAKGKPQPSIRWLKNG-----------ASYGKGDLIKRGLTLEDAGMYQCIAENMHGII 386

Query: 114 KSYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAP 170
            + + +L +LA AP F   P  + + AA+   V  ECK    P+ +  W    + +  + 
Sbjct: 387 YA-NAELKILALAPTFEFTPMRKKVLAAKGGRVIIECKPKAAPKAKFSWSKGTELLINSS 445

Query: 171 PNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
              R  +  +  + I N+ K D G+Y C A N  G       ++V A A +IT AP +  
Sbjct: 446 ---RVSIWDDGSLEILNITKLDEGSYTCFAENDRGKANSTGVLSVTA-ATKITLAPSNAD 501

Query: 230 TVDGKTVVLTCRVFGAPKPEVNWIHN------QKELTGGRYTILETGD----LKITDVAF 279
              G+   + C     P  ++ +I        + +   G Y      D    L I +   
Sbjct: 502 VTVGENATMQCHASHDPTLDLTFIWTLNGFPIEFDKEDGHYERAIRNDVGSELVIKNAQL 561

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
             +G YTC A+  +  +  S  L V+            E+              D S+KL
Sbjct: 562 KHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGVRVEEIR-------------DTSVKL 608

Query: 340 SIVWLRGS---EPID-FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE---- 391
           +  W  G+   +PI  +  + + + S D+    T++  ++      RA   + +++    
Sbjct: 609 T--WSSGTDNHQPISKYNIQAKNILSEDWKDVKTENPNIEGNMEMARAIDLIPWMDYEFR 666

Query: 392 --AQATLTVQVP-LEAPSNFT-----LIQVIDA-------KKAVVSWNPVSPQSLRGHFR 436
             A  TL V  P L +P   T     ++   +        ++  V+W P+S +   G   
Sbjct: 667 VTATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGSNRELTVTWQPLSREYHYGDGF 726

Query: 437 GYKVQTWTEKDGEGSIRELIVNKGES--TTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
           GY V        E   R++IV   ES     + D   PA++   +V AFN    GP S  
Sbjct: 727 GYVVAFKLFNYREW--RKVIVTNPESGHYVHKDDTITPATQFQVKVKAFNKVGEGPYSST 784

Query: 495 ISFVTPEGVPGTVQSLEAIP---LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP 551
           +   + E VP  +++  AI    L SS   + W    + +  + GY+++Y   +  +   
Sbjct: 785 VVIYSAEDVP--IEAPTAIVYNILSSSEVSVAWHPVYEKS--IEGYQVRYWRTQDKEAAA 840

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGR 611
              ++   SD TT   +L GL P T Y + +  +  AGDG  S+ + ++  K P + + R
Sbjct: 841 HRVQVK-ASDITT---RLEGLLPDTHYNLEVRAFNSAGDGPPSRVITFLTKKAPPSQKPR 896

Query: 612 GSTP----NNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            ++     +  +I+W  +  + + +    Y++ +R+
Sbjct: 897 ITSAVRYGSQYIITWEHVVPLSNESAVNGYKVLYRQ 932



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 86/370 (23%), Positives = 132/370 (35%), Gaps = 40/370 (10%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           KV + C     P P   W ++   I+  +       G  +I    ++ D G Y C VSN 
Sbjct: 44  KVSVNCRARANPPPVYKWRRNNWEIDLLNEHYSLVGGNLVINNPDKYKDSGKYVCIVSNM 103

Query: 110 VGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI------HWVHN 162
            G+  S   +L+     P+ T E   +   E       C     P P         W+ N
Sbjct: 104 YGKVWSREANLNFGYLDPFPTEERYEVKVKEGTGAVLICD----PPPHFPDDLNYRWLLN 159

Query: 163 GKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE- 220
             P+  +P N R     N  + I  + +SD GNY C  ++    V K V+   ++  P+ 
Sbjct: 160 EFPVFISPDNRRFVTQANGNLYIAKVEQSDRGNYSCFVSSP--SVTKSVFSKFISLLPQT 217

Query: 221 -ITEAP-----------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE 268
             +E P           KD   +  + V L C   G P P + W    + +       + 
Sbjct: 218 DTSEKPKRYTPVINVKFKDTRALKDQNVTLECFALGNPIPVITWRKTNEAMPASAEISMS 277

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
              LKI ++   D G Y C A+N  G       + V+      +   D E + G    + 
Sbjct: 278 GAVLKIFNIQPEDEGTYECEAKNIKGMDTHKAYVYVEGVPEWVEHINDTERDIGSDLHWA 337

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A   P  + SI WL+                    L     +  D+G Y C A+    
Sbjct: 338 CVAKGKP--QPSIRWLKNG-----------ASYGKGDLIKRGLTLEDAGMYQCIAENMHG 384

Query: 389 FIEAQATLTV 398
            I A A L +
Sbjct: 385 IIYANAELKI 394



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 17/195 (8%)

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
           VP+EAP+   +  ++ + +  V+W+PV  +S+ G    Y+V+ W  +D E +   + V K
Sbjct: 793 VPIEAPTAI-VYNILSSSEVSVAWHPVYEKSIEG----YQVRYWRTQDKEAAAHRVQV-K 846

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
               TT ++  +P +     V AFN A +GPPS +I+F+T +  P     + +     S 
Sbjct: 847 ASDITTRLEGLLPDTHYNLEVRAFNSAGDGPPSRVITFLTKKAPPSQKPRITSAVRYGSQ 906

Query: 520 FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTK 577
           + + W  V P      + GYK+ Y+   G + G L          T   +    +    +
Sbjct: 907 YIITWEHVVPLSNESAVNGYKVLYRQ-DGQRDGKLYS--------TGKHSVELPVPEEGE 957

Query: 578 YRIHLAGYTKAGDGA 592
           Y + +  +++ GDGA
Sbjct: 958 YVVEVRAHSEGGDGA 972



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 107/282 (37%), Gaps = 36/282 (12%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   I     +    VG N +   
Sbjct: 31  PIDTIFPE---ESMEGKVSVNCRARANPPPVYKWRRNNWEIDLLNEH-YSLVGGNLVINN 86

Query: 186 NLRKSDTGNYGCNATNSLGYVY-KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFG 244
             +  D+G Y C  +N  G V+ ++  +N     P  TE   +    +G   VL C    
Sbjct: 87  PDKYKDSGKYVCIVSNMYGKVWSREANLNFGYLDPFPTEERYEVKVKEGTGAVLICD--- 143

Query: 245 APKPEV------NWIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCFARN-KL 293
            P P         W+ N+  +       R+     G+L I  V  +D G Y+CF  +  +
Sbjct: 144 -PPPHFPDDLNYRWLLNEFPVFISPDNRRFVTQANGNLYIAKVEQSDRGNYSCFVSSPSV 202

Query: 294 GTAQGSGSLTVKEHTHITDQPEDY-----------EVEAGQSATFRCNAVSDPSLKLSIV 342
             +  S  +++   T  +++P+ Y                Q+ T  C A+ +P     I 
Sbjct: 203 TKSVFSKFISLLPQTDTSEKPKRYTPVINVKFKDTRALKDQNVTLECFALGNPI--PVIT 260

Query: 343 WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           W + +E +   +E   +  +   L +      D G Y C A+
Sbjct: 261 WRKTNEAMPASAE---ISMSGAVLKIFNIQPEDEGTYECEAK 299


>gi|344276065|ref|XP_003409830.1| PREDICTED: neural cell adhesion molecule L1-like protein [Loxodonta
           africana]
          Length = 1225

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 186/726 (25%), Positives = 303/726 (41%), Gaps = 68/726 (9%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P  +  +R  EV L+ + + L C   G P PQ  W K G  + P  R+++ NY K+L I+
Sbjct: 256 PPTERGSRSSEVILKGETLLLECFAEGLPTPQVEWDKLGGDL-PKGRVTKENYNKTLKIE 314

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGL 152
           +V + D+G Y C  +N +G A ++   +++   P +T +P+      E +    C+A G 
Sbjct: 315 NVSYHDKGIYRCTANNFLGTA-THDFHVTIEEPPRWTKKPQSGVYNTESSDILICEAEGE 373

Query: 153 PEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYV 212
           P+P I W  NG P    P     +  P  I+  NL+ ++T    C A+N  G +  +  V
Sbjct: 374 PQPTIKWRMNGSPNINHPFVVDVR-SPKEISFTNLQPNNTAVLQCEASNIHGTILTNANV 432

Query: 213 NVLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILET 269
           +V+   P I TE  ++   V G +  L C  F +PK  V+W  +   K L G RY I E 
Sbjct: 433 DVVDIHPLIQTEDEENYAAVVGYSAFLHCVFFASPKASVSWQKVDEAKPLEGIRYYIHEN 492

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I      D+G Y+C+  N  G A  + +L ++  T +   P++  V         C
Sbjct: 493 GTLQINKTTEEDAGPYSCWVENAKGKAAVTANLDIRNATKLRVSPKNPRVPRSHILELHC 552

Query: 330 NAVSDPSLK--LSIVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
            + SD  LK  L + W +  E  +   +E   +  +  +LT+   +  D G Y+C AQT 
Sbjct: 553 ESKSDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANLTIANVTLEDQGVYSCLAQTA 612

Query: 387 LDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
           LD       +TV    + P N  L+     +   +SW   +      +   Y V+    K
Sbjct: 613 LDSTADITQVTVLDLPDPPENL-LLSERQNRSVRLSWE--AGDDHNSNISEYIVEFEGNK 669

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG 505
           +  G   EL   +G+ TT  +    P  +   RV+A N      PS+      TP   P 
Sbjct: 670 EEPGRWEELTRVQGKETTVML-SLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPD 728

Query: 506 -TVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              Q++           +KW  +K  + NG  + Y++ ++  +G  V           + 
Sbjct: 729 KNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEE 779

Query: 563 TTTSAKLAGLEPST--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN--VEGRGSTPNN 617
           T T+  L  + P+    Y + +    + G G E   +  Y     PD   V  R    N+
Sbjct: 780 TVTNHTLRVMTPTVYAPYDVQVQAINQLGSGPEPHSVTLYSGEDYPDTAPVIHRVDVINS 839

Query: 618 LV--ISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYE 675
            V  ++W+ +P+   +     Y+I W        W    +LD R             P E
Sbjct: 840 TVVKVTWSTIPKDRVHGRLKGYQISW--------WKTKSLLDGRT-----------HPKE 880

Query: 676 IKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS 735
           + +++              +  +       +D F   S+    VLA+N    GP SE   
Sbjct: 881 VNILR-------------FLGPRNYGMVPSLDAF---SEFHLTVLAYNSKGAGPESEPYI 924

Query: 736 FVTPEG 741
           F TPEG
Sbjct: 925 FQTPEG 930



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 129/573 (22%), Positives = 220/573 (38%), Gaps = 47/573 (8%)

Query: 53   LFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L C+F  +P     W K  +  P+         N   +L I      D G Y+C V N  
Sbjct: 459  LHCVFFASPKASVSWQKVDEAKPLEGIRYYIHEN--GTLQINKTTEEDAGPYSCWVENAK 516

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA---SGLPEP-EIHWVHNGKPI 166
            G+A + + +L +  A    V P+         +   C++   S L    ++ W  +G+  
Sbjct: 517  GKA-AVTANLDIRNATKLRVSPKNPRVPRSHILELHCESKSDSHLKHSLKLSWSKDGEAF 575

Query: 167  S-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
                  + R  +    +TI N+   D G Y C A  +L        V VL    ++ + P
Sbjct: 576  EINGTEDGRIIIDGANLTIANVTLEDQGVYSCLAQTALDSTADITQVTVL----DLPDPP 631

Query: 226  KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG-----GRYTILETGDLKITDVAFA 280
            ++    + +   +            N      E  G     GR+  L     K T V  +
Sbjct: 632  ENLLLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEEPGRWEELTRVQGKETTVMLS 691

Query: 281  DSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSAT-------F 327
             +     ++   A N++G +Q S      E         P++  V+A Q           
Sbjct: 692  LAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPL 751

Query: 328  RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            +    + P L+  + W     P+++E E       +++L V   +         +A  +L
Sbjct: 752  KSMEQNGPGLEYRVTWKPQGAPVEWEEE----TVTNHTLRVMTPTVYAPYDVQVQAINQL 807

Query: 388  DFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWT 444
                   ++T+    + P    +I    VI++    V+W+ +    + G  +GY++  W 
Sbjct: 808  GSGPEPHSVTLYSGEDYPDTAPVIHRVDVINSTVVKVTWSTIPKDRVHGRLKGYQISWWK 867

Query: 445  EK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
             K   DG    +E+ + +  G      V      S+    VLA+N    GP SE   F T
Sbjct: 868  TKSLLDGRTHPKEVNILRFLGPRNYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQT 927

Query: 500  PEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERLPY 558
            PEGVP     L+ I +      L W  P + NG L GY ++YQ +  T ++G L +    
Sbjct: 928  PEGVPEQPTFLKVIKVDKDTATLSWGLPNKLNGNLTGYLLQYQIINDTYEIGELNDI--N 985

Query: 559  ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            I+ P+     L+ L  +TKY+ +L   T  G G
Sbjct: 986  ITTPSKPIWHLSNLNATTKYKFYLRACTSKGCG 1018



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 137/340 (40%), Gaps = 49/340 (14%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSD-RISQGNYGKSLIIK---HVEFSDQGSYTCEVS 107
           ++ C   G P PQ  W+KD  P N SD RI   N   +  I    H+    QG Y C  +
Sbjct: 54  QIECEAKGNPAPQFTWTKDDKPFNLSDPRIIVSNNSGTFKIPNEGHIAHF-QGKYRCFAA 112

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEE---TVTFECK-ASGLPEPEIHWVH-N 162
           N +G A S  I+  V + P F  E   IN  E E   ++   C    GLP   I+W++  
Sbjct: 113 NKLGVALSEEIEFIVPSVPKFPKEK--INPLEVEEGDSIVLPCNPPKGLPPLHIYWMNIE 170

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLA 216
            + I Q       + G   +   N+ + D+ N Y C A        +  +   + VN L 
Sbjct: 171 LEHIEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLK 228

Query: 217 HA--------------------PEITEAPKD------EYTVDGKTVVLTCRVFGAPKPEV 250
           HA                    P +   P +      E  + G+T++L C   G P P+V
Sbjct: 229 HANDSSSSTEIGSKANLIKQRKPRLLLPPTERGSRSSEVILKGETLLLECFAEGLPTPQV 288

Query: 251 NWIHNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH 309
            W     +L  GR T       LKI +V++ D G Y C A N LGTA     +T++E   
Sbjct: 289 EWDKLGGDLPKGRVTKENYNKTLKIENVSYHDKGIYRCTANNFLGTATHDFHVTIEEPPR 348

Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEP 349
            T +P+        S    C A  +P  + +I W     P
Sbjct: 349 WTKKPQSGVYNTESSDILICEAEGEP--QPTIKWRMNGSP 386



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 133/366 (36%), Gaps = 64/366 (17%)

Query: 86  GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTF 145
           G+ LII  + F  + S   E+   V +A +      V  A  F           +E    
Sbjct: 7   GRGLIISLIFFLLKFSTAIEIPLSVQQAPTIIKQSKVQVAFPF-----------DEYFQI 55

Query: 146 ECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN----RITIENLRKSDTGNYGCNATN 201
           EC+A G P P+  W  + KP + +  +PR  V  N    +I  E       G Y C A N
Sbjct: 56  ECEAKGNPAPQFTWTKDDKPFNLS--DPRIIVSNNSGTFKIPNEGHIAHFQGKYRCFAAN 113

Query: 202 SLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHNQKEL 259
            LG    +    ++   P+  +   +   V +G ++VL C    G P   + W++ + E 
Sbjct: 114 KLGVALSEEIEFIVPSVPKFPKEKINPLEVEEGDSIVLPCNPPKGLPPLHIYWMNIELEH 173

Query: 260 T--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTHITDQ 313
                R  + + GDL   +V   DS  +Y CFA   R +    +    LTV    H  D 
Sbjct: 174 IEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHANDS 233

Query: 314 PEDYEVEA-----------------------------GQSATFRCNAVSDPSLKLSIVWL 344
               E+ +                             G++    C A   P+ ++    L
Sbjct: 234 SSSTEIGSKANLIKQRKPRLLLPPTERGSRSSEVILKGETLLLECFAEGLPTPQVEWDKL 293

Query: 345 RGSEPIDFESEPRFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE 403
            G  P     + R  + N + +L +   S  D G Y C A   L      AT    V +E
Sbjct: 294 GGDLP-----KGRVTKENYNKTLKIENVSYHDKGIYRCTANNFL----GTATHDFHVTIE 344

Query: 404 APSNFT 409
            P  +T
Sbjct: 345 EPPRWT 350


>gi|296225704|ref|XP_002758612.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
           [Callithrix jacchus]
          Length = 1209

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 179/713 (25%), Positives = 299/713 (41%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 253 LKGETLLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYGKTLKIENVSYQDKGNYRCT 311

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG P
Sbjct: 312 ASNFLGTA-THDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 370

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEA 224
           I   P      V P  ++  NL+ + T  Y C A+N  G +  +  +N++   P I TE 
Sbjct: 371 IDNHP-FAGDVVFPREVSFTNLQPNHTAVYQCEASNVHGTILANANINIVDVRPLIQTED 429

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            ++  TV G +  L C  F +P+  V+W  +   K L G RY I E G L+I      D+
Sbjct: 430 EENYATVVGYSAFLHCEFFASPEAIVSWQKVEEAKPLEGRRYHIYENGTLQINRTTEEDA 489

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L 
Sbjct: 490 GSYSCWVENSIGKTAVTANLDIRNATKLRVSPKNPRIPKLHMLELHCESKCDAHLKHSLK 549

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y C A T+LD       +TV 
Sbjct: 550 LSWSKDGEAFEINGTEDGRIIIDGANLTISNITLEDQGIYCCSAHTDLDSAADITQVTVL 609

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +      +   Y V+    K+  G   EL   +
Sbjct: 610 DVPDPPENLHLSERQN-RSVRLTWE--AGDDHNSNISEYIVEFEGNKEEPGRWEELTRVQ 666

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 667 GKKTTV-ILPLAPFVRYQFRVIAMNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 725

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 726 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 776

Query: 576 T--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G + + +  Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 777 VYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKD 836

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ V++        
Sbjct: 837 RVHGRLKGYQINW--------WKTKSLLDGRT-----------HPKEVNVLKF------- 870

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 871 ---------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTPEG 914



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 126/570 (22%), Positives = 227/570 (39%), Gaps = 60/570 (10%)

Query: 135 INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSD 191
           I   + ET+  EC A GLP P++ W   G  + +      R+   N    + IEN+   D
Sbjct: 250 ITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKG-----RETKENYGKTLKIENVSYQD 304

Query: 192 TGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVN 251
            GNY C A+N LG    D +V ++   P  T+ P+      G   +L C   G P+P + 
Sbjct: 305 KGNYRCTASNFLGTATHDFHV-IVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIK 363

Query: 252 WIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH 309
           W  N   +    +   ++   ++  T++    +  Y C A N  GT   + ++ + +   
Sbjct: 364 WRVNGSPIDNHPFAGDVVFPREVSFTNLQPNHTAVYQCEASNVHGTILANANINIVDVRP 423

Query: 310 I--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
           +  T+  E+Y    G SA   C   + P   +S  W +  E    E     +  N  +L 
Sbjct: 424 LIQTEDEENYATVVGYSAFLHCEFFASPEAIVS--WQKVEEAKPLEGRRYHIYENG-TLQ 480

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVS 427
           + +++E D+G Y+C  +  +      A L ++               +A K  VS  P +
Sbjct: 481 INRTTEEDAGSYSCWVENSIGKTAVTANLDIR---------------NATKLRVS--PKN 523

Query: 428 PQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGES---TTTEVDKFVPASKNFA---RVL 481
           P+  + H      ++  +   + S++      GE+     TE  + +    N       L
Sbjct: 524 PRIPKLHMLELHCESKCDAHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANLTISNITL 583

Query: 482 AFNGAY------NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
              G Y      +   +  I+ VT   VP   ++L      + +  L W   +  N  + 
Sbjct: 584 EDQGIYCCSAHTDLDSAADITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGDDHNSNIS 643

Query: 536 GYKIKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y ++++   G K  P   E L  +    TT   +  L P  +Y+  +    + G    S
Sbjct: 644 EYIVEFE---GNKEEPGRWEELTRVQGKKTTV--ILPLAPFVRYQFRVIAMNEVGRSQPS 698

Query: 595 KYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
           +   +       P +NP N+  + S P  ++I W  +  +E N P  +YR+ W+      
Sbjct: 699 QPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPV 758

Query: 649 AWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            W ++ V +     L +     + PY++KV
Sbjct: 759 EWEEETVTN---HTLRVMTPAVYAPYDVKV 785



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 133/575 (23%), Positives = 229/575 (39%), Gaps = 51/575 (8%)

Query: 53   LFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L C F  +P     W K  +  P+    R        +L I      D GSY+C V N +
Sbjct: 443  LHCEFFASPEAIVSWQKVEEAKPL--EGRRYHIYENGTLQINRTTEEDAGSYSCWVENSI 500

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECK----ASGLPEPEIHWVHNGKPI 166
            G+  + + +L +  A    V P+     +   +   C+    A      ++ W  +G+  
Sbjct: 501  GKT-AVTANLDIRNATKLRVSPKNPRIPKLHMLELHCESKCDAHLKHSLKLSWSKDGEAF 559

Query: 167  S-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
                  + R  +    +TI N+   D G Y C+A   L        V VL    ++ + P
Sbjct: 560  EINGTEDGRIIIDGANLTISNITLEDQGIYCCSAHTDLDSAADITQVTVL----DVPDPP 615

Query: 226  KDEYTVD--GKTVVLTCRVFGAPKPE-----VNWIHNQKELTGGRYTILETGDLKITDVA 278
            ++ +  +   ++V LT               V +  N++E   GR+  L     K T V 
Sbjct: 616  ENLHLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEE--PGRWEELTRVQGKKTTVI 673

Query: 279  FADSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSAT------ 326
               +     ++   A N++G +Q S      E         P++  V+A Q         
Sbjct: 674  LPLAPFVRYQFRVIAMNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWE 733

Query: 327  -FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
              +    + P L+  + W     P+++E E       +++L V   +         +A  
Sbjct: 734  PLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TVTNHTLRVMTPAVYAPYDVKVQAIN 789

Query: 386  ELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKAVVSWNPVSPQSLRGHFRGYKVQT 442
            +L       ++T+    + P    +I    VI++    V+W+ +    + G  +GY++  
Sbjct: 790  QLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQINW 849

Query: 443  WTEK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
            W  K   DG    +E+ V K  G+  +  V      S+    VLA+N    GP SE   F
Sbjct: 850  WKTKSLLDGRTHPKEVNVLKFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIF 909

Query: 498  VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERL 556
             TPEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T ++G L +  
Sbjct: 910  QTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGKLTGYLLQYQIINDTYEIGELNDI- 968

Query: 557  PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
              I+ P+  S  L+ L  +T+Y+ +L   T  G G
Sbjct: 969  -NITTPSKPSWHLSNLNATTRYKFYLRACTSKGCG 1002



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 171/416 (41%), Gaps = 50/416 (12%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P   W+KD  P   +D   I+  N G   I      S  QG Y C  SN
Sbjct: 54  QIECEAKGNPEPIFTWTKDDNPFYFTDPRIITSNNSGTFRIPNEGHISHFQGKYRCFASN 113

Query: 109 GVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECK-ASGLPEPEIHWVH-NG 163
            +G A S  I+  V + P F    ++P  +   E + +   C    GLP   I+W++   
Sbjct: 114 KLGIAMSEEIEFIVPSVPKFPKENIDP--LEVEEGDPIVLPCNPPKGLPPLHIYWMNIEL 171

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-NSLGYVYKDVYVNVLAHA--- 218
           + I Q       + G   +   N+ + D+ N Y C A    L  + + + + +  ++   
Sbjct: 172 EHIEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNS 229

Query: 219 -----PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
                P +   P +  +      + G+T++L C   G P P+V+W     +L  GR T  
Sbjct: 230 IKQRKPRLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKE 289

Query: 268 ETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
             G  LKI +V++ D G Y C A N LGTA     + V+E    T +P+      G +  
Sbjct: 290 NYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKKPQSAVYSTGSNGI 349

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPID---------FESEPRF--VQSNDYSLTVTKSSELD 375
             C A  +P  + +I W     PID         F  E  F  +Q N  ++   ++S + 
Sbjct: 350 LLCEAEGEP--QPTIKWRVNGSPIDNHPFAGDVVFPREVSFTNLQPNHTAVYQCEASNVH 407

Query: 376 SGQYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDAKKAVVSWNPV 426
               T  A   ++ ++ +  +  +       +   S F   +   + +A+VSW  V
Sbjct: 408 G---TILANANINIVDVRPLIQTEDEENYATVVGYSAFLHCEFFASPEAIVSWQKV 460



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 110/293 (37%), Gaps = 31/293 (10%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPN--PRRKVGPNRITIENLRKSDTGNYGC 197
           +E    EC+A G PEP   W  +  P     P        G  RI  E       G Y C
Sbjct: 50  DEYFQIECEAKGNPEPIFTWTKDDNPFYFTDPRIITSNNSGTFRIPNEGHISHFQGKYRC 109

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN 255
            A+N LG    +    ++   P+  +   D   V +G  +VL C    G P   + W++ 
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKENIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNI 169

Query: 256 QKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTH 309
           + E      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV     
Sbjct: 170 ELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNS 229

Query: 310 ITDQ-------PEDYEVEA------GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           I  +       P +   E+      G++    C A   P+ ++    + G  P   E++ 
Sbjct: 230 IKQRKPRLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKE 289

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFT 409
            + +    +L +   S  D G Y C A   L      AT    V +E P  +T
Sbjct: 290 NYGK----TLKIENVSYQDKGNYRCTASNFL----GTATHDFHVIVEEPPRWT 334


>gi|296475000|tpg|DAA17115.1| TPA: contactin-4-like [Bos taurus]
          Length = 1014

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 191/726 (26%), Positives = 294/726 (40%), Gaps = 111/726 (15%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P  IW + DG PI    R  + N    L I + +  D G Y C   N 
Sbjct: 232 VKLECFALGNPVPTIIWRRADGKPIATKARRHKSN--GILEIPNFQQEDAGLYECVAENS 289

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P ++ +   I+ A EE V +ECKA+G P+P   W+ NG+P+   
Sbjct: 290 RGKNVAKG-QLTFYAQPNWSQKINDIHVAIEENVFWECKANGRPKPTYRWLKNGEPLLT- 347

Query: 170 PPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
               R ++    G   ITI NL  SD G Y C A N  G ++    ++V+A  P+ +   
Sbjct: 348 ----RDRIHIEQGTLNITIVNL--SDAGMYQCVAENKHGVIFSSAELSVIAVGPDFSRTL 401

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADS 282
               T+   G  VV+ C+   +PKP   W   +  L    R TI E G L+I +V  +D+
Sbjct: 402 LKRVTLVKVGGEVVIECKPKASPKPVHTWKKGRDVLKENERITISEDGSLRIINVTKSDA 461

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   
Sbjct: 462 GSYTCIATNHFGTASSTGNLVVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLNIVFT 521

Query: 343 WLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           W      IDF+ +     R    +   L +       +G+Y C  QT +D + A A L V
Sbjct: 522 WSFNGRLIDFDRDGDHFERVGGDSAGDLMIRNIQLKHAGKYICMVQTSVDRLSAAADLIV 581

Query: 399 QVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGEG 450
           + P   P   T+ ++ D   A +SW P     SP ++      Y +Q  T          
Sbjct: 582 RGPPGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFSVGWQAVN 634

Query: 451 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTPE 501
           ++ ELI   G++ T  V    P  +   R +A N    G PS         E +  VTP 
Sbjct: 635 TVPELI--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPA 692

Query: 502 GVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
            V G   S        S   + W  V  E  NG   GY + ++       G ++  L  +
Sbjct: 693 NVSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFRP-----YGKMIWMLTVL 740

Query: 560 --SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRG 612
             +D +    +   + P + + + +  +   G+G  S           P K P ++  R 
Sbjct: 741 ASADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARS 800

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
            +  ++ + W +  E                                       N+   Q
Sbjct: 801 LSATDIEVFWASPME--------------------------------------KNRGRIQ 822

Query: 673 PYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 732
            YE+K    W   D E + R+ I   G  T+T++     ++     V A+N A  GP S 
Sbjct: 823 GYEVKY---WRHDDKEENARK-IRTIGNQTSTKITNLKGSALYHLAVKAYNSAGTGPASA 878

Query: 733 IISFVT 738
            ++  T
Sbjct: 879 TVNVTT 884



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 163/637 (25%), Positives = 241/637 (37%), Gaps = 84/637 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V+ PE +  
Sbjct: 167 NLYIAKVEKSDVGNYTCVVTNTVTNQKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPT 226

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   +GKPI+      RR      + I N ++ D G Y 
Sbjct: 227 AKGTTVKLECFALGNPVPTIIWRRADGKPIAT---KARRHKSNGILEIPNFQQEDAGLYE 283

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P  ++   D +    + V   C+  G PKP   W+ N 
Sbjct: 284 CVAENSRGKNVAKGQLTFYAQ-PNWSQKINDIHVAIEENVFWECKANGRPKPTYRWLKNG 342

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           + L       +E G L IT V  +D+G Y C A NK G    S  L+V     I   P+ 
Sbjct: 343 EPLLTRDRIHIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSV-----IAVGPDF 397

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  K    W +G + +  E+E R   S D SL +
Sbjct: 398 SRTLLKRVTLVKVGGEVVIECKPKASP--KPVHTWKKGRDVLK-ENE-RITISEDGSLRI 453

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV------- 421
              ++ D+G YTC A        +   L V+ P +     + + V   +  V+       
Sbjct: 454 INVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTKVMVPPSSMDVTVGESIVLPCQVTHD 513

Query: 422 -SWNPVSPQSLRGHFRGY-KVQTWTEKDGEGSIRELIVNKGE---------STTTEVDKF 470
            S N V   S  G    + +     E+ G  S  +L++   +            T VD+ 
Sbjct: 514 HSLNIVFTWSFNGRLIDFDRDGDHFERVGGDSAGDLMIRNIQLKHAGKYICMVQTSVDRL 573

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPEQ 529
             A+    R         GPP    +    E    T Q S    P   S   +  ++   
Sbjct: 574 SAAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQART 624

Query: 530 PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           P      + + +Q+V           +P + D  T +A + GL P  +Y          G
Sbjct: 625 P------FSVGWQAVN---------TVPELIDGKTFTATVVGLNPWVEYEFRTVAANVIG 669

Query: 590 DGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  S      +    +P   P NV G G + + LVI+W  +PE   N   F Y + +R 
Sbjct: 670 IGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRP 729

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
           +     W    +     S  V  N+    F P+E+KV
Sbjct: 730 YGK-MIWMLTVLASADASRYVFRNESVRPFSPFEVKV 765



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 183/476 (38%), Gaps = 42/476 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  ++            SL+I +  +  D G Y C  +
Sbjct: 33  KKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDAGMYQCIAT 92

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLP----EPEIHWVHN 162
           N  G   S    L       F       ++  + + +   C   G P    E    W+ N
Sbjct: 93  NSFGTIVSREAKLQFAYLENFKPRTRSTVSVRQGQGMVLLC---GPPAHSGELSYAWIFN 149

Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN- 213
             P  Q   + RR V      + I  + KSD GNY C  TN+      LG     +  N 
Sbjct: 150 EYPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNQKVLGPPTPLILRND 206

Query: 214 --VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILET 269
             +  + P+I  + P+   T  G TV L C   G P P + W   + K +          
Sbjct: 207 GVMGEYEPKIEVQFPETVPTAKGTTVKLECFALGNPVPTIIWRRADGKPIATKARRHKSN 266

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I +    D+G Y C A N  G     G LT     + + +  D  V   ++  + C
Sbjct: 267 GILEIPNFQQEDAGLYECVAENSRGKNVAKGQLTFYAQPNWSQKINDIHVAIEENVFWEC 326

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   P  K +  WL+  EP+         Q    +L +T  +  D+G Y C A+ +   
Sbjct: 327 KANGRP--KPTYRWLKNGEPLLTRDRIHIEQG---TLNITIVNLSDAGMYQCVAENKHGV 381

Query: 390 IEAQATLTVQVPLEAPSNFTLIQVIDAKK----AVVSWNP-VSPQSLRGHFRGYKVQTWT 444
           I + A L+V + +    + TL++ +   K     V+   P  SP+ +    +G  V    
Sbjct: 382 IFSSAELSV-IAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVHTWKKGRDVLKEN 440

Query: 445 EK---DGEGSIRELIVNK---GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
           E+     +GS+R + V K   G  T    + F  AS     V+        PPS +
Sbjct: 441 ERITISEDGSLRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTKVMVPPSSM 496



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 116/298 (38%), Gaps = 32/298 (10%)

Query: 123 LAAPYFTVEPEFIN---AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGP 179
           L  P F  EP  +     +EE+ V   C+  G P+P I W  NG  +     + R  V  
Sbjct: 12  LHGPIFIQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIG-MDFRYSVVE 70

Query: 180 NRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
             + I N  K+ D G Y C ATNS G +         A+        +   +V  G+ +V
Sbjct: 71  GSLLINNPNKTQDAGMYQCIATNSFGTIVSREAKLQFAYLENFKPRTRSTVSVRQGQGMV 130

Query: 238 LTCRVFGAP----KPEVNWIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYTCFARN 291
           L C   G P    +    WI N+        R+   ETG+L I  V  +D G YTC   N
Sbjct: 131 LLC---GPPAHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTN 187

Query: 292 KLGTAQ-----------GSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            +   +             G +   E       PE      G +    C A+ +P    +
Sbjct: 188 TVTNQKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTAKGTTVKLECFALGNPV--PT 245

Query: 341 IVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           I+W R   +PI   ++ R  +SN   L +    + D+G Y C A+       A+  LT
Sbjct: 246 IIWRRADGKPI--ATKARRHKSNGI-LEIPNFQQEDAGLYECVAENSRGKNVAKGQLT 300



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 23/191 (12%)

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
           RG  +GY+V+ W   D E + R+ I   G  T+T++     ++     V A+N A  GP 
Sbjct: 818 RGRIQGYEVKYWRHDDKEENARK-IRTIGNQTSTKITNLKGSALYHLAVKAYNSAGTGPA 876

Query: 492 SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
           S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 877 SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWSR 932

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
            +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P    
Sbjct: 933 QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIP--KI 980

Query: 606 DNVEGRGSTPN 616
            N   RG+ P+
Sbjct: 981 SNAYARGAGPS 991


>gi|55976512|sp|Q8AXZ4.1|CNT1A_DANRE RecName: Full=Contactin-1a; AltName: Full=F3/F11/contactin;
           AltName: Full=Neural cell recognition molecule F11;
           Flags: Precursor
 gi|23345063|gb|AAN17734.1| recognition molecule F3/F11/contactin [Danio rerio]
          Length = 1032

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 189/721 (26%), Positives = 298/721 (41%), Gaps = 90/721 (12%)

Query: 24  ISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQ 82
           I+    R  P    V      AL  + V L C   G P+PQ  W K DGV   P  R   
Sbjct: 240 IAERSLRKYPADIKVKSPDSWALLGQNVTLECFALGNPIPQIRWRKLDGV--LPPLRHDV 297

Query: 83  GNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET 142
              G  L +  +++ D+G Y CE  N  G+   +   L V  AP +    E I+++E + 
Sbjct: 298 SMSGALLHLYSLQYEDEGLYECEADNSKGK-DWHKTHLYVEGAPDWL---EQISSSEVDI 353

Query: 143 ---VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA 199
                  C+ASG P+P +H++ NG    +           + +    L   D+G Y C A
Sbjct: 354 GGDYIMSCQASGKPKPHVHFLKNGHMYMKG----------HEVRFSRLGFEDSGMYQCVA 403

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKT--VVLTCRVFGAPKPEVNWIHNQK 257
            N  G ++ +  + V A AP     P     +  +   VV  CR   AP+P + W    +
Sbjct: 404 ENRHGVIHANAELRVFASAPSFQYNPVKPKLLGARNGRVVFECRPRAAPRPNITWSKGTE 463

Query: 258 EL-TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
            L    R +I   G L++ +++ +D G+YTCFA N  G A  +GSL++ + T IT  P +
Sbjct: 464 LLHNSSRISIWLDGSLELLNISKSDEGKYTCFAENDRGRANSTGSLSITDATKITLAPSN 523

Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL-- 374
            +V  G+ A   C A  DP L L+ +W      I+ + + +  Q    S + T SSEL  
Sbjct: 524 ADVSVGEDARMECVASHDPGLDLTFIWSLDGHTINLQRDAQHYQRKMDSASGTSSSELLI 583

Query: 375 ------DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSW----N 424
                  +G+Y+C AQT +D   A A L V+ P   P    + +V      V+ W    +
Sbjct: 584 THTQLRHAGRYSCTAQTPVDNTTASAELVVRGPPGPPGGVRVDEVTSDSVRVL-WSHGTD 642

Query: 425 PVSPQSLRGHFRGYKVQ---TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 481
            +SP S       Y VQ   +  ++D   +    +  +G +    V   +P ++   RV+
Sbjct: 643 NLSPISR------YTVQLRESAAQQDWRDAATSPVNVEGNAEMATVVNLLPWTEYEFRVI 696

Query: 482 AFNGAYNGPPSE------------IISFVTPEGVPGTVQSLEAI--PLGSSAFYLKWVKP 527
           A N    GPPSE            I++     G  GT + L     P+ S  +Y      
Sbjct: 697 ATNTLGTGPPSEPSPKTTTREARPIVAPSDIGGGGGTSRELTITWTPVQSQYYY------ 750

Query: 528 EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS--AKLAGLEPSTKYRIHLAGY 585
               G   GY I ++        P   R+  ++DP       K   + PST++ + +  +
Sbjct: 751 ----GSNFGYIIAFKPHND----PEWLRVT-VTDPEAQKYVHKDPKIPPSTRFEVKMKAF 801

Query: 586 TKAGDGAESKYLFY-----VPFKNPDNVEGRGSTPNNLVISW--TAMPEIEHNAPHFKYR 638
              G+G  S   F      VP + P   E R  +    ++ W    +P +E      +Y+
Sbjct: 802 NSQGEGPFSNSAFIYSAQDVPAEAPIITEARALSATEAIVIWVPVQLPTVE------RYQ 855

Query: 639 I-FWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVN 697
           + +WR     EA  Q  ++  R++   L N      Y ++V        G  S R  I  
Sbjct: 856 VRYWRESVENEASAQRVLVSSRENHTRLDNMKPDSHYLVEVRACNGAGYGPASQRNRIYT 915

Query: 698 K 698
           K
Sbjct: 916 K 916



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 98/412 (23%), Positives = 149/412 (36%), Gaps = 69/412 (16%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPI------NPSDRISQGNYGKSLIIKHVEFSDQ-GS 101
           +K+ L C     P     W  +   +      +P   +S+GN    L+I   + S   G+
Sbjct: 64  EKITLTCRTRANPPASYRWRLNNAELVLAEGSDPHYSVSEGN----LLISSPDKSKHAGN 119

Query: 102 YTCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKAS-GLPEP-EIH 158
           YTC  SN  G   S    +       F T E E +   E +     C      PE     
Sbjct: 120 YTCVASNQYGSVTSRRARVQFGYLDMFSTDEREAVYVKEGQGAVLLCAPPPHFPEDLSFR 179

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           W+ N  P    P + RR V  +   + I  +R +D+GNY C  ++    + K V+   + 
Sbjct: 180 WMLNEFP-EFIPLDQRRFVSQSTGNLYISTVRSTDSGNYSCFVSSPA--IAKSVFSKFIP 236

Query: 217 HAP-----------EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
             P           +I     D + + G+ V L C   G P P++ W      L   R+ 
Sbjct: 237 LVPIAERSLRKYPADIKVKSPDSWALLGQNVTLECFALGNPIPQIRWRKLDGVLPPLRHD 296

Query: 266 ILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
           +  +G  L +  + + D G Y C A N  G       L V+      +Q    EV+ G  
Sbjct: 297 VSMSGALLHLYSLQYEDEGLYECEADNSKGKDWHKTHLYVEGAPDWLEQISSSEVDIGGD 356

Query: 325 ATFRCNAVSDPS-----LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQY 379
               C A   P      LK   ++++G E                 +  ++    DSG Y
Sbjct: 357 YIMSCQASGKPKPHVHFLKNGHMYMKGHE-----------------VRFSRLGFEDSGMY 399

Query: 380 TCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
            C A+     I A A L  +V   APS                +NPV P+ L
Sbjct: 400 QCVAENRHGVIHANAEL--RVFASAPS--------------FQYNPVKPKLL 435



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 96/239 (40%), Gaps = 42/239 (17%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHW-VHNGKPISQAPPNPRRKVGPNRITI 184
           P  T+ PE    + EE +T  C+    P     W ++N + +     +P   V    + I
Sbjct: 52  PLDTIYPE---ESPEEKITLTCRTRANPPASYRWRLNNAELVLAEGSDPHYSVSEGNLLI 108

Query: 185 ENLRKS-DTGNYGCNATNSLGYVYKDV------YVNVLAHAPEITEAPKDEYTVDGKTVV 237
            +  KS   GNY C A+N  G V          Y+++ +     T+  +  Y  +G+  V
Sbjct: 109 SSPDKSKHAGNYTCVASNQYGSVTSRRARVQFGYLDMFS-----TDEREAVYVKEGQGAV 163

Query: 238 LTCRVFGAPKPEV------NWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTC 287
           L C    AP P         W+ N+      L   R+    TG+L I+ V   DSG Y+C
Sbjct: 164 LLC----APPPHFPEDLSFRWMLNEFPEFIPLDQRRFVSQSTGNLYISTVRSTDSGNYSC 219

Query: 288 FARNKLGTAQGSGS----LTVKEHTHITDQPEDYEVEA-------GQSATFRCNAVSDP 335
           F  +    A+   S    L       +   P D +V++       GQ+ T  C A+ +P
Sbjct: 220 FVSSP-AIAKSVFSKFIPLVPIAERSLRKYPADIKVKSPDSWALLGQNVTLECFALGNP 277



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 23/199 (11%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK-DGEGSIRELIVN 458
            VP EAP   T  + + A +A+V W PV   ++      Y+V+ W E  + E S + ++V+
Sbjct: 821  VPAEAPI-ITEARALSATEAIVIWVPVQLPTVER----YQVRYWRESVENEASAQRVLVS 875

Query: 459  KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE---IISFVTPEGVPGTVQSLEAIPL 515
              E+ T  +D   P S     V A NGA  GP S+   I +  +P   P  + S +    
Sbjct: 876  SRENHT-RLDNMKPDSHYLVEVRACNGAGYGPASQRNRIYTKKSPPSRPPKIISTKMHYS 934

Query: 516  GSSAFYLKWVKPEQPN--GVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLE 573
            G+S   + W K E  N    + GYK+ Y+   G   G L     Y ++  +    +   E
Sbjct: 935  GTS-INIAWEKVESLNNESTVAGYKVLYRQ-HGQPSGTL-----YTTEKQSIDLPMRRGE 987

Query: 574  PSTKYRIHLAGYTKAGDGA 592
                Y + +  +++ GDGA
Sbjct: 988  ----YLVEVRAHSEGGDGA 1002


>gi|7959295|dbj|BAA96038.1| KIAA1514 protein [Homo sapiens]
          Length = 1598

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 140/499 (28%), Positives = 212/499 (42%), Gaps = 23/499 (4%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
           + V   C+A G+P P I W  +   +        R+     + I  L   DTG + C A 
Sbjct: 1   KVVDIPCQAKGVPPPSITWYKDAAVVEVEKLTRFRQRNDGGLQISGLVPDDTGMFQCFAR 60

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT 260
           N+ G V    Y+ V + AP IT  P D   +DG +VVL C   GAP+P + W   ++ L 
Sbjct: 61  NAAGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILA 120

Query: 261 GG-----RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE 315
            G     R+T LE+G L I+    +D+G YTC A N  G  + S  L V   T IT  P+
Sbjct: 121 SGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQ 180

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
           D  V  G  A+  C    DP + +  +W +    +  ES PR     + SL ++++   D
Sbjct: 181 DQSVIKGTQASMVCGVTHDPRVTIRYIWEKDGATLGTESHPRIRLDRNGSLHISQTWSGD 240

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRGH 434
            G YTCR  +        A L V+    AP +    +  ++ +   ++W    P      
Sbjct: 241 IGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWT--KPFDGNSP 298

Query: 435 FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
              Y ++  +E +   ++    V+  ++T+  V   VPA     R+ A N    G  S+ 
Sbjct: 299 LIRYILEM-SENNAPWTVLLASVDP-KATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKD 356

Query: 495 ISFVTPEGVPGTVQSLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVG 550
              V+    P T      I  G +  +  ++W  P +   NG+L GY I+Y  + G  VG
Sbjct: 357 TERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRY-CLAGLPVG 415

Query: 551 PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNP 605
               +   I+D    +  L  L   T Y I +A Y  AG G  S       L  VP   P
Sbjct: 416 ---YQFKNITDADVNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPP 472

Query: 606 DNVEGRGSTPNNLVISWTA 624
            NV    +    +  +W A
Sbjct: 473 GNVHAEATNSTTIRFTWNA 491



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 143/633 (22%), Positives = 235/633 (37%), Gaps = 56/633 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           K V++ C   G P P   W KD   V +    R  Q N G  L I  +   D G + C  
Sbjct: 1   KVVDIPCQAKGVPPPSITWYKDAAVVEVEKLTRFRQRNDG-GLQISGLVPDDTGMFQCFA 59

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPI 166
            N  GE ++ +       AP  T  P      +  +V   C+ SG P P I W    + +
Sbjct: 60  RNAAGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERIL 119

Query: 167 SQAPPN-PR-RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           +      PR   +    + I     SD G Y C ATNS G       + V A    IT+ 
Sbjct: 120 ASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWART-RITKP 178

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDVAF 279
           P+D+  + G    + C V   P+  + +I  +   T G     R  +   G L I+    
Sbjct: 179 PQDQSVIKGTQASMVCGVTHDPRVTIRYIWEKDGATLGTESHPRIRLDRNGSLHISQTWS 238

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------EDYEVEAGQSATFRCNAV 332
            D G YTC   +  G    S  L V++  H  + P       E   +    +  F  N+ 
Sbjct: 239 GDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPFDGNS- 297

Query: 333 SDPSLKLSIVWLRGSEP---IDFESEPR--------FVQSNDYSLTVTKSSELDSGQYTC 381
             P ++  +     + P   +    +P+         V +  Y   +   +++  GQ++ 
Sbjct: 298 --PLIRYILEMSENNAPWTVLLASVDPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSK 355

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
             +        + +L  + P   P N       + +  ++ W P       G  +GY ++
Sbjct: 356 DTE--------RVSLPEEPPTAPPQNVIASGRTN-QSIMIQWQPPPESHQNGILKGYIIR 406

Query: 442 TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
                   G   + I +  +     ++  +  +     V A+N A  G  S  ++  T +
Sbjct: 407 YCLAGLPVGYQFKNITD-ADVNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQ 465

Query: 502 GV----PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK-IKYQSVKGTKVGPLLERL 556
           GV    PG V + EA    +  F      P+  NG+  GYK I ++  +  +V  +  R 
Sbjct: 466 GVPTVPPGNVHA-EATNSTTIRFTWNAPSPQFINGINQGYKLIAWEPEQEEEVTMVTAR- 523

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS--- 613
           P   D +     ++GL+  T+Y   +  +T  GDG  S        ++     G  S   
Sbjct: 524 PNFQD-SIHVGFVSGLKKFTEYFTSVLCFTTPGDGPRSTPQLVRTHEDVPGPVGHLSFSE 582

Query: 614 -TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
               +L +SW      E N     YRI W  +N
Sbjct: 583 ILDTSLKVSWQE--PGEKNGILTGYRISWEEYN 613



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 147/588 (25%), Positives = 227/588 (38%), Gaps = 70/588 (11%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEV 106
           V L C   G P P   W K G  I  S  +    +      SL+I     SD G+YTC  
Sbjct: 96  VVLACETSGAPRPAITWQK-GERILASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLA 154

Query: 107 SN--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--WVHN 162
           +N  GV EA   S DL V A    T  P+  +  +    +  C  +  P   I   W  +
Sbjct: 155 TNSRGVDEA---SADLVVWARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTIRYIWEKD 211

Query: 163 GKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAP 219
           G  +     +PR ++  N  + I      D G Y C   ++ G   +  ++ V  L HAP
Sbjct: 212 GATLGTES-HPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAP 270

Query: 220 EITEAPKDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVA 278
           E   A     TV+ + + LT  + F    P + +I    E       +L + D K T V 
Sbjct: 271 EHPVATLS--TVERRAINLTWTKPFDGNSPLIRYILEMSENNAPWTVLLASVDPKATSVT 328

Query: 279 F-----ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS--ATFRCN- 330
                 A S ++   A N +G  Q S      + T     PE+      Q+  A+ R N 
Sbjct: 329 VKGLVPARSYQFRLCAVNDVGKGQFS------KDTERVSLPEEPPTAPPQNVIASGRTNQ 382

Query: 331 -----------AVSDPSLKLSIV-WLRGSEPIDFESEPRFVQSNDYS------LTVTKSS 372
                      +  +  LK  I+ +     P+ ++   + +   D +      L +  + 
Sbjct: 383 SIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQF--KNITDADVNNLLLEDLIIWTNY 440

Query: 373 ELDSGQYTCRAQTELDFIEAQAT-LTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQS 430
           E++   Y       L    ++ T  T+Q VP   P N    +  ++     +WN  SPQ 
Sbjct: 441 EIEVAAYNSAG---LGVYSSKVTEWTLQGVPTVPPGNVH-AEATNSTTIRFTWNAPSPQF 496

Query: 431 LRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR----VLAFNGA 486
           + G  +GYK+  W E + E  +  +        +  V  FV   K F      VL F   
Sbjct: 497 INGINQGYKLIAW-EPEQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYFTSVLCFTTP 554

Query: 487 YNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKG 546
            +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY+I ++    
Sbjct: 555 GDGPRSTPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNR 614

Query: 547 TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 615 TNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 657



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 177/477 (37%), Gaps = 65/477 (13%)

Query: 234 KTVVLTCRVFGAPKPEVNWIHNQ-----KELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           K V + C+  G P P + W  +      ++LT  R+     G L+I+ +   D+G + CF
Sbjct: 1   KVVDIPCQAKGVPPPSITWYKDAAVVEVEKLT--RFRQRNDGGLQISGLVPDDTGMFQCF 58

Query: 289 ARNKLGTAQGSGSLTVKE-HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS 347
           ARN  G  Q S  L V     +IT  P D  V  G S    C     P  + +I W +G 
Sbjct: 59  ARNAAGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLACETSGAP--RPAITWQKGE 116

Query: 348 EPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAP 405
             +   S   PRF      SL ++ +   D+G YTC A       EA A L         
Sbjct: 117 RILASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADL--------- 167

Query: 406 SNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTT 465
                  V+ A+  +    P   QS+    +   V   T  D   +IR +    G +  T
Sbjct: 168 -------VVWARTRIT--KPPQDQSVIKGTQASMVCGVTH-DPRVTIRYIWEKDGATLGT 217

Query: 466 EVDKFVPASKN----------------FARVLAFNGAYNGPPSEIISFV--TPEGVPGTV 507
           E    +   +N                  RV++  G  +      +  +   PE    T+
Sbjct: 218 ESHPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATL 277

Query: 508 QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSA 567
            ++E       A  L W KP   N  L+ Y ++  S        LL  +    DP  TS 
Sbjct: 278 STVE-----RRAINLTWTKPFDGNSPLIRYILE-MSENNAPWTVLLASV----DPKATSV 327

Query: 568 KLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV------PFKNPDNVEGRGSTPNNLVIS 621
            + GL P+  Y+  L      G G  SK    V      P   P NV   G T  +++I 
Sbjct: 328 TVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQ 387

Query: 622 WTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           W   PE   N     Y I +        +   ++ D   + L+L +   +  YEI+V
Sbjct: 388 WQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLIIWTNYEIEV 444



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N  ++    A +  V+W P    S  G  +GYK+  W  + G  + R   +  
Sbjct: 1299 VPTAAPRNV-VVHGATATQLDVTWEPPPLDSQNGDIQGYKIYFWEAQRGNLTERVKTLFL 1357

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E++  ++      +     V AFN A +GP S      T +  P    S++   L +++
Sbjct: 1358 AENSV-KLKNLTGYTAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSAPSSVKFSELTTTS 1416

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNG+L GY++ Y+
Sbjct: 1417 VNVSWEAPQFPNGILEGYRLVYE 1439



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 81/350 (23%), Positives = 139/350 (39%), Gaps = 48/350 (13%)

Query: 379  YTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVID--AKKAVVSWNP----VSPQ 429
            +   AQT   + EA   L V         P +  ++Q  D  A+  ++SW P    +SP 
Sbjct: 1050 FRITAQTRKGWGEAAEALVVTTEKRDRPQPPSRPMVQQEDVRARSVLLSWEPGSDGLSP- 1108

Query: 430  SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
                  R Y +QT     G  ++    V+   S+   VD+  P +    RV A N   + 
Sbjct: 1109 -----VRYYTIQTRELPSGRWALHSASVSHNASSFI-VDRLKPFTSYKFRVKATNDIGDS 1162

Query: 490  PPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQ 542
              SE    +T     P+  P     L   P  +++  ++W  P  ++ NG+L+G++I+Y+
Sbjct: 1163 EFSEESESLTTLQAAPDEAPTI---LSVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYR 1219

Query: 543  SV--KGTKVGPL---------------LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
             +  +G +   L               +  +  +S P+ T  +L  L    +Y I ++ Y
Sbjct: 1220 ELLYEGLRGFTLRGINNPGATWAELTSMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVY 1279

Query: 586  TKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
               G+G  S  + +F    VP   P NV   G+T   L ++W   P    N     Y+I+
Sbjct: 1280 NAVGEGPSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQNGDIQGYKIY 1339

Query: 641  WRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGS 690
            +     G    +   L   ++ + L N   +  Y + V       DG  S
Sbjct: 1340 FWEAQRGNLTERVKTLFLAENSVKLKNLTGYTAYMVSVAAFNAAGDGPRS 1389



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ V      G   GYKV  + EKD +   R  +V  
Sbjct: 875  VPSSGPTNVSALATTSSS-MLVRWSEVPEADRNGLVLGYKVM-YKEKDSDTQPRFWLVEG 932

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 933  NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 992

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P + Y
Sbjct: 993  SVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVL----APSARQYTATGLKPESVY 1048

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1049 LFRITAQTRKGWGEAAEAL 1067



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 128/308 (41%), Gaps = 48/308 (15%)

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 635 LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGPPTNLGISN---------- 680

Query: 426 VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
           + P+S+   FR GY  +T    W  +   G + E    L++    N+ ++ + EV    P
Sbjct: 681 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNP 740

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
            +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 741 FTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTA---SETSLWLRWMPL 797

Query: 527 PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
           PE     N   +GYKIKY    G   G  L  +  + D       +  LE  T+YR+ + 
Sbjct: 798 PEMEYNGNPESVGYKIKYSRSDGH--GKTLSHV--VQDRVERDYTIEDLEEWTEYRVQVQ 853

Query: 584 GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
            +   G G  S+ +       VP   P NV    +T +++++ W+ +PE + N     Y+
Sbjct: 854 AFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYK 913

Query: 639 IFWRRHNT 646
           + ++  ++
Sbjct: 914 VMYKEKDS 921


>gi|345786232|ref|XP_003432799.1| PREDICTED: contactin-4 isoform 1 [Canis lupus familiaris]
          Length = 1026

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 191/727 (26%), Positives = 293/727 (40%), Gaps = 112/727 (15%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P  IW + DG PI    R  + N    L I + +  D G Y C   N 
Sbjct: 243 VKLECFALGNPVPTIIWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGLYECVAENS 300

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P +  +   I+ A EE V +ECKA+G P+P   W+ NG+P+   
Sbjct: 301 RGKNVARG-QLTFYAQPNWIQKINDIHVAIEENVFWECKANGRPKPTYRWLKNGEPLLT- 358

Query: 170 PPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
               R ++    G   ITI NL  SD G Y C A N  G ++    ++V+A  P+ +   
Sbjct: 359 ----RDRIQIEQGMLNITIVNL--SDAGMYQCVAENKHGVIFSSAELSVIAVGPDFSRTL 412

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADS 282
               T+   G  VV+ C+   +PKP   W   +  L    R TI E G L+I +V  +D+
Sbjct: 413 LKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDILRENERITISEDGSLRIVNVTKSDA 472

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   
Sbjct: 473 GSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFT 532

Query: 343 WLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           W      IDF+ +         Q +   L +       +G+Y C  QT +D + A A L 
Sbjct: 533 WSFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLI 592

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGE 449
           V+ P   P   T+ ++ D   A +SW P     SP ++      Y +Q  T         
Sbjct: 593 VRGPPGPPEGVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFSVGWQAV 645

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTP 500
            ++ ELI   G++ T  V    P  +   R +A N    G PS         E +  VTP
Sbjct: 646 NTVPELI--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTP 703

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
             V G   S        S   + W  V  E  NG   GY + ++       G ++  L  
Sbjct: 704 ANVSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFRP-----YGKMIWMLTV 751

Query: 559 I--SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGR 611
           +  +D +    +   + P + + + +  +   G+G  S           P K P ++  R
Sbjct: 752 LASADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFAR 811

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
             +  ++ + W +  E                                       N+   
Sbjct: 812 SLSATDIEVFWASPME--------------------------------------KNRGRI 833

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
           Q YE+K    W   D E + R+ I   G  T+T++     ++     V A+N A  GP S
Sbjct: 834 QGYEVKY---WRHDDKEENARK-IRTIGNQTSTKITNLKGSALYHLAVKAYNTAGTGPSS 889

Query: 732 EIISFVT 738
             ++  T
Sbjct: 890 ATVNVTT 896



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 164/638 (25%), Positives = 238/638 (37%), Gaps = 85/638 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V  PE +  
Sbjct: 178 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVHFPETVPT 237

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   +GKPI++     RR      + I N ++ D G Y 
Sbjct: 238 AKGTTVKLECFALGNPVPTIIWRRADGKPIAR---KARRHKSNGILEIPNFQQEDAGLYE 294

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P   +   D +    + V   C+  G PKP   W+ N 
Sbjct: 295 CVAENSRGKNVARGQLTFYAQ-PNWIQKINDIHVAIEENVFWECKANGRPKPTYRWLKNG 353

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           + L       +E G L IT V  +D+G Y C A NK G    S  L+V     I   P+ 
Sbjct: 354 EPLLTRDRIQIEQGMLNITIVNLSDAGMYQCVAENKHGVIFSSAELSV-----IAVGPDF 408

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  K    W +G + I  E+E R   S D SL +
Sbjct: 409 SRTLLKRVTLVKVGGEVVIECKPKASP--KPVYTWKKGRD-ILRENE-RITISEDGSLRI 464

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
              ++ D+G YTC A        +   L V+ P       + + V   +  V+       
Sbjct: 465 VNVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHD 524

Query: 429 QSL----RGHFRGYKVQTWTEKD------GEGSIRELIVNKGE---------STTTEVDK 469
            SL       F G+ +    + D      G+ S  +L++   +            T VDK
Sbjct: 525 HSLDIVFTWSFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDK 584

Query: 470 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPE 528
              A+    R         GPP         E    T Q S    P   S   +  ++  
Sbjct: 585 LSAAADLIVR---------GPPGPPEGVTIDEITDTTAQLSWRPGPDNHSPITMYVIQAR 635

Query: 529 QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
            P      + + +Q+V           +P + D  T +A + GL P  +Y          
Sbjct: 636 TP------FSVGWQAVN---------TVPELIDGKTFTATVVGLNPWVEYEFRTVAANVI 680

Query: 589 GDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F Y + +R
Sbjct: 681 GIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFR 740

Query: 643 RHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
            +     W    +     S  V  N+    F P+E+KV
Sbjct: 741 PYGK-MIWMLTVLASADASRYVFRNESVRPFSPFEVKV 777



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 141/368 (38%), Gaps = 28/368 (7%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  ++            SL+I +  +  D G Y C  +
Sbjct: 44  KKVKLNCEVKGNPKPHIRWKLNGTDVDTGVDFRYSVVEGSLLINNPNKTQDAGMYQCIAT 103

Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFEC---KASGLPEPEIHWVHNG 163
           N  G   S    L       F T     ++  + + +   C     SG  E    W+ N 
Sbjct: 104 NSFGTIVSREAKLRFAYLENFKTRTRSTVSVRQGQGMVLLCGPPAHSG--ELSYAWIFNE 161

Query: 164 KPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN-- 213
            P  Q   + RR V      + I  + KSD GNY C  TN+      LG     +  N  
Sbjct: 162 YPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDG 218

Query: 214 -VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILETG 270
            +  + P+I    P+   T  G TV L C   G P P + W   + K +          G
Sbjct: 219 VMGEYEPKIEVHFPETVPTAKGTTVKLECFALGNPVPTIIWRRADGKPIARKARRHKSNG 278

Query: 271 DLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN 330
            L+I +    D+G Y C A N  G     G LT     +   +  D  V   ++  + C 
Sbjct: 279 ILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAIEENVFWECK 338

Query: 331 AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
           A   P  K +  WL+  EP+        +Q     L +T  +  D+G Y C A+ +   I
Sbjct: 339 ANGRP--KPTYRWLKNGEPLLTRDR---IQIEQGMLNITIVNLSDAGMYQCVAENKHGVI 393

Query: 391 EAQATLTV 398
            + A L+V
Sbjct: 394 FSSAELSV 401



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 117/302 (38%), Gaps = 32/302 (10%)

Query: 119 DLSVLAAPYFTVEPEFIN---AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D   L  P F  EP  +     +EE+ V   C+  G P+P I W  NG  +     + R 
Sbjct: 19  DDYTLHGPVFIQEPSHVMFPLNSEEKKVKLNCEVKGNPKPHIRWKLNGTDVDTG-VDFRY 77

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            V    + I N  K+ D G Y C ATNS G +         A+        +   +V  G
Sbjct: 78  SVVEGSLLINNPNKTQDAGMYQCIATNSFGTIVSREAKLRFAYLENFKTRTRSTVSVRQG 137

Query: 234 KTVVLTCRVFGAP----KPEVNWIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYTC 287
           + +VL C   G P    +    WI N+        R+   ETG+L I  V  +D G YTC
Sbjct: 138 QGMVLLC---GPPAHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTC 194

Query: 288 FARNK------LG-----TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              N       LG       +  G +   E       PE      G +    C A+ +P 
Sbjct: 195 VVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVHFPETVPTAKGTTVKLECFALGNPV 254

Query: 337 LKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
              +I+W R   +PI    + R  +SN   L +    + D+G Y C A+       A+  
Sbjct: 255 --PTIIWRRADGKPI--ARKARRHKSNGI-LEIPNFQQEDAGLYECVAENSRGKNVARGQ 309

Query: 396 LT 397
           LT
Sbjct: 310 LT 311



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 23/191 (12%)

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            RG  +GY+V+ W   D E + R+ I   G  T+T++     ++     V A+N A  GP 
Sbjct: 830  RGRIQGYEVKYWRHDDKEENARK-IRTIGNQTSTKITNLKGSALYHLAVKAYNTAGTGPS 888

Query: 492  SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
            S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 889  SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNR 944

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
             +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P    
Sbjct: 945  QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIP--KI 992

Query: 606  DNVEGRGSTPN 616
             N   RG+ P+
Sbjct: 993  SNAYARGAGPS 1003


>gi|426339224|ref|XP_004033558.1| PREDICTED: contactin-4-like [Gorilla gorilla gorilla]
          Length = 807

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 191/725 (26%), Positives = 295/725 (40%), Gaps = 108/725 (14%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P  IW + DG PI    R  + N    L I + +  D G Y C   N 
Sbjct: 24  VKLECFALGNPVPTIIWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGLYECVAENS 81

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P +  +   I+ A EE V +ECKA+G P+P   W+ NG+P+   
Sbjct: 82  RGKNVARG-QLTFYAQPNWIQKINDIHVAIEENVFWECKANGRPKPTYRWLKNGEPLLT- 139

Query: 170 PPNPRRKV--GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKD 227
               R ++  G   ITI NL  SD G Y C A N  G ++ +  ++V+A  P+ +     
Sbjct: 140 --QDRIQIEQGTLNITIVNL--SDAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTLLK 195

Query: 228 EYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADSGE 284
             T+   G  VV+ C+   +PKP   W   +  L    R TI E G+L+I +V  +D+G 
Sbjct: 196 RVTLVKVGGEVVIECKPKASPKPVYTWKKGRGILKENERITISEDGNLRIINVTKSDAGS 255

Query: 285 YTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWL 344
           YTC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   W 
Sbjct: 256 YTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWS 315

Query: 345 RGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
                IDF+ +         Q +   L +       +G+Y C  QT +D + A A L V+
Sbjct: 316 FNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVR 375

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGEGS 451
            P   P   T+ ++ D   A +SW P     SP ++      Y +Q  T          +
Sbjct: 376 GPPGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFSVGWQAVST 428

Query: 452 IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTPEG 502
           + ELI   G++ T  V    P  +   R +A N    G PS         E +  VTP  
Sbjct: 429 VPELI--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPAN 486

Query: 503 VPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI- 559
           V G   S        S   + W  V  E  NG   GY + ++       G ++  L  + 
Sbjct: 487 VSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFR-----PYGKMIWMLTVLA 534

Query: 560 -SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGS 613
            +D +    +   + P + + + +  +   G+G  S           P K P ++  R  
Sbjct: 535 SADASRYVFRNESVHPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSI 594

Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
           +  ++ + W +  E                                       N+   Q 
Sbjct: 595 SATDIEVFWASPLE--------------------------------------KNRGRIQG 616

Query: 674 YEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 733
           YE+K    W  +D E + R+ I   G  T+T++     +      V A+N A  GP S  
Sbjct: 617 YEVKY---WRHEDKEENARK-IRTVGNQTSTKITNLKGSVLYHLAVKAYNSAGTGPSSAT 672

Query: 734 ISFVT 738
           ++  T
Sbjct: 673 VNVTT 677



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 145/584 (24%), Positives = 217/584 (37%), Gaps = 75/584 (12%)

Query: 132 PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKS 190
           PE +  A+  TV  EC A G P P I W   +GKPI++     RR      + I N ++ 
Sbjct: 13  PETVPTAKGATVKLECFALGNPVPTIIWRRADGKPIAR---KARRHKSNGILEIPNFQQE 69

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A NS G       +   A  P   +   D +    + V   C+  G PKP  
Sbjct: 70  DAGLYECVAENSRGKNVARGQLTFYAQ-PNWIQKINDIHVAIEENVFWECKANGRPKPTY 128

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N + L       +E G L IT V  +D+G Y C A NK G    +  L+V     I
Sbjct: 129 RWLKNGEPLLTQDRIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSV-----I 183

Query: 311 TDQPEDYE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
              P+           V+ G      C   + P  K    W +G   I  E+E R   S 
Sbjct: 184 AVGPDFSRTLLKRVTLVKVGGEVVIECKPKASP--KPVYTWKKG-RGILKENE-RITISE 239

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVS 422
           D +L +   ++ D+G YTC A        +   L V+ P       + + V   +  V+ 
Sbjct: 240 DGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLP 299

Query: 423 WNPVSPQSL----RGHFRGYKVQTWTEKD------GEGSIRELIVNKGE---------ST 463
                  SL       F G+ +    + D      G+ S  +L++   +           
Sbjct: 300 CQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMV 359

Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYL 522
            T VD+   A+    R         GPP    +    E    T Q S    P   S   +
Sbjct: 360 QTSVDRLSAAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITM 410

Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
             ++   P      + + +Q+V           +P + D  T +A + GL P  +Y    
Sbjct: 411 YVIQARTP------FSVGWQAVS---------TVPELIDGKTFTATVVGLNPWVEYEFRT 455

Query: 583 AGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
                 G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F 
Sbjct: 456 VAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFG 515

Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
           Y + +R +     W    +     S  V  N+    F P+E+KV
Sbjct: 516 YVVAFRPYGK-MIWMLTVLASADASRYVFRNESVHPFSPFEVKV 558



 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 21/192 (10%)

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
           RG  +GY+V+ W  +D E + R+ I   G  T+T++     +      V A+N A  GP 
Sbjct: 611 RGRIQGYEVKYWRHEDKEENARK-IRTVGNQTSTKITNLKGSVLYHLAVKAYNSAGTGPS 669

Query: 492 SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
           S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 670 SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNR 725

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
            +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P  + 
Sbjct: 726 QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIPKISN 775

Query: 606 DNVEGRGSTPNN 617
               G G++ +N
Sbjct: 776 AYARGSGASTSN 787


>gi|390351116|ref|XP_781559.3| PREDICTED: protein sidekick-2-like [Strongylocentrotus purpuratus]
          Length = 2029

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 180/680 (26%), Positives = 288/680 (42%), Gaps = 62/680 (9%)

Query: 51  VELFCIFGGTPLP--QTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC--EV 106
           V++ CI    PL   Q  W KDG  ++ +        G  L I +   ++ G+Y C  ++
Sbjct: 233 VQMECIISAHPLSSLQISWQKDGEGLDAT--------GAILKIFNPTEANAGTYRCIGDL 284

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
           +     A   S +L++  AP  T   E  I  A   ++T  C A+G+P P+I W  N   
Sbjct: 285 AGSGMPAVEASANLTMYIAPTITSPLERIIQEAAGSSITLPCMATGVPAPQIKWYRNAAD 344

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           I+    +  R      + + N+ K+D+G + C A N +G    D ++ V   APEIT AP
Sbjct: 345 ITTMGNSRFRMEDDGSLKLSNIEKADSGMFQCQAINDVGEQIVDTWLQVQEIAPEITLAP 404

Query: 226 KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG------RYTILETGDLKITDVAF 279
            D   ++G+T  L C   GAP P ++W  + + +         RY +   G+L +     
Sbjct: 405 NDTTILEGETTYLECAAEGAPHPTIHWEKDGQLVLSASFRLNDRYVLQTFGNLLLQQAVK 464

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
            DSGEYTC A N L TA  S SL V + T I+ +P   +   G++ T  C    D  +  
Sbjct: 465 EDSGEYTCIATNTLNTANSSASLIVYQRTVISQKPTSVQTILGETTTLNCVVQHDSRVTP 524

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV- 398
           ++ W++    I      RF+     SL +  +   D G Y C+  +        A LTV 
Sbjct: 525 TVTWMQDGGVIIPNG--RFIIQESGSLVILSTDANDMGLYVCKVTSIAGDDLGSANLTVL 582

Query: 399 QVPLEAPSNFTLIQVIDAKKA-VVSWNPV--SPQSLRGHFRGYKVQTWTEKDGEGSIREL 455
           QVP + P   T  +  D  +  +VSW PV     +L  +    K       + E +I  L
Sbjct: 583 QVPYQ-PQGVTATKSQDQDRTIIVSWLPVFDGNSALIRYILEQKEDDSAFTEVEATINPL 641

Query: 456 IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVP-GTVQSLEAI 513
           +      T   V    P+ +   R+ A N       SE  + V  PE +P    Q ++ +
Sbjct: 642 L------TQFLVTGVRPSRRYQYRLRAQNAIGMSEKSEASNVVHLPEELPTAPPQEVDIV 695

Query: 514 PLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAG 571
              S++F   +  P  +  NG+  GYK+      G +  P+ E +P    P    ++  G
Sbjct: 696 VTSSTSFMYIFSSPPVQFINGINQGYKLLAWE-PGMESNPITELVP----PNVAQSRFIG 750

Query: 572 ----LEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKN-PDNVEGRGSTPNNLV-----IS 621
               L+  T+Y+  +  YT  GDG  S  +  +  ++ P  V   G   NN+      +S
Sbjct: 751 NITTLKKFTEYQASVLCYTNPGDGVPSTPVTLMTHEDVPGPVSNLGL--NNVYDTSVQVS 808

Query: 622 WTAMPEIEHNAPHFKYRIFWRRHN-TGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQ 680
           W    E+  N     Y I W+ HN T   +N +     R+            P    ++Q
Sbjct: 809 WEQPQEV--NGALSGYSISWQEHNRTSNIYNAN-----RKPNETSYTITALTPDTTYLIQ 861

Query: 681 TWTEKD-GEGSIRELIVNKG 699
            W +   G G   ++I++ G
Sbjct: 862 VWAKTSVGPGPTTDIIISSG 881



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 162/399 (40%), Gaps = 58/399 (14%)

Query: 61  PLPQTIWSKDGVPI--NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV--GEAKSY 116
           P+P   W  +G  I   P   ++     + L++       QGSYTC  +N V      S 
Sbjct: 141 PIPTVTWQFNGTDIILGPDQLVTAD---QRLVLLQATSQRQGSYTCNANNNVYGYTQTSP 197

Query: 117 SIDLSV--------LAAPYFTVEP-EFINAAEEETVTFECKASGLP--EPEIHWVHNGKP 165
           S+ L+V          AP   + P   +    +  V  EC  S  P    +I W  +G+ 
Sbjct: 198 SVMLTVQGTFTPPAFIAPTLVLPPSSTVVRPGQSFVQMECIISAHPLSSLQISWQKDGEG 257

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGC-NATNSLGYVYKDVYVNVLAH-APEITE 223
           +               + I N  +++ G Y C       G    +   N+  + AP IT 
Sbjct: 258 LDAT---------GAILKIFNPTEANAGTYRCIGDLAGSGMPAVEASANLTMYIAPTIT- 307

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELT---GGRYTILETGDLKITDVA 278
           +P +    +  G ++ L C   G P P++ W  N  ++T     R+ + + G LK++++ 
Sbjct: 308 SPLERIIQEAAGSSITLPCMATGVPAPQIKWYRNAADITTMGNSRFRMEDDGSLKLSNIE 367

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPEDYEVEAGQSATFRCNAVSDPSL 337
            ADSG + C A N +G       L V+E    IT  P D  +  G++    C A   P  
Sbjct: 368 KADSGMFQCQAINDVGEQIVDTWLQVQEIAPEITLAPNDTTILEGETTYLECAAEGAP-- 425

Query: 338 KLSIVWLRGSEPI---DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
             +I W +  + +    F    R+V     +L + ++ + DSG+YTC A   L+   + A
Sbjct: 426 HPTIHWEKDGQLVLSASFRLNDRYVLQTFGNLLLQQAVKEDSGEYTCIATNTLNTANSSA 485

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRG 433
           +L V                  ++ V+S  P S Q++ G
Sbjct: 486 SLIVY-----------------QRTVISQKPTSVQTILG 507



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 175/750 (23%), Positives = 274/750 (36%), Gaps = 107/750 (14%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDG-----VPINPSDRISQGNYGKSLIIKHVEFSDQG 100
            L  +   L C   G P P   W KDG          +DR     +G  L+ + V+  D G
Sbjct: 410  LEGETTYLECAAEGAPHPTIHWEKDGQLVLSASFRLNDRYVLQTFGNLLLQQAVK-EDSG 468

Query: 101  SYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC--KASGLPEPEIH 158
             YTC  +N +  A S S  L V      + +P  +     ET T  C  +      P + 
Sbjct: 469  EYTCIATNTLNTANS-SASLIVYQRTVISQKPTSVQTILGETTTLNCVVQHDSRVTPTVT 527

Query: 159  WVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA- 216
            W+ +G  I    PN R  +  +  + I +   +D G Y C  T+  G       + VL  
Sbjct: 528  WMQDGGVII---PNGRFIIQESGSLVILSTDANDMGLYVCKVTSIAGDDLGSANLTVLQV 584

Query: 217  -HAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETG----- 270
             + P+   A K +   D   +V    VF      + +I  QKE     +T +E       
Sbjct: 585  PYQPQGVTATKSQ-DQDRTIIVSWLPVFDGNSALIRYILEQKE-DDSAFTEVEATINPLL 642

Query: 271  -DLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ-----PEDYEVEAGQS 324
                +T V  +   +Y   A+N +G ++ S +  V    H+ ++     P++ ++    S
Sbjct: 643  TQFLVTGVRPSRRYQYRLRAQNAIGMSEKSEASNV---VHLPEELPTAPPQEVDIVVTSS 699

Query: 325  ATFRCNAVSDPSLKLS--------IVWLRGSE--PIDFESEPRFVQSNDY-SLTVTKSSE 373
             +F     S P   ++        + W  G E  PI     P   QS    ++T  K   
Sbjct: 700  TSFMYIFSSPPVQFINGINQGYKLLAWEPGMESNPITELVPPNVAQSRFIGNITTLKKFT 759

Query: 374  LDSGQYTCRAQTELDFIEAQATLTVQVPLEAP-SNFTLIQVIDAKKAVVSWNPVSPQSLR 432
                   C             TL     +  P SN  L  V D     VSW    PQ + 
Sbjct: 760  EYQASVLCYTNPGDGVPSTPVTLMTHEDVPGPVSNLGLNNVYDTS-VQVSWE--QPQEVN 816

Query: 433  GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 492
            G   GY + +W E +   +I        E++ T +    P +    +V A      GP +
Sbjct: 817  GALSGYSI-SWQEHNRTSNIYNANRKPNETSYT-ITALTPDTTYLIQVWAKTSVGPGPTT 874

Query: 493  EII--SFVTPE--------GVPG-TVQS----LEAIP-LGSSAFYLKWVKPEQPNGVLMG 536
            +II  S + PE         VPG T+QS    L   P L  +A    W         L+G
Sbjct: 875  DIIISSGIPPERPQPPTNLNVPGSTIQSRSVQLHFTPGLDGNAGITLWTVQG-----LIG 929

Query: 537  YKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-- 594
               ++++V              +SD +  S K+ GLEP T Y+  +     AG    S  
Sbjct: 930  QSDRWETVF------------ELSDSSARSVKITGLEPFTYYQFRMIATNVAGSSNVSEP 977

Query: 595  ----KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
                +    VP   P +V  R      L ++W  + + E N     YRI+W+ + T    
Sbjct: 978  SEQIQTDQDVPAIAPRDVRVRAFNATALRVTWMPLDDTEWNGVPGGYRIYWKPYGTNMQE 1037

Query: 651  NQDDVLDWRQSELVLANQPTFQPYEIKV--------------VQTWTEK----DGEGSIR 692
               D+     +  V+     + PY++++              V  WT +     G  +I+
Sbjct: 1038 MIFDLASPYINNHVIGGLEEWMPYDVRIEAYNEQHSGPTSGMVAGWTNEAVPSAGPSNIQ 1097

Query: 693  ELIVNKGESTTTEVDKFVPASKNFARVLAF 722
             L +   E   T  D  VPA      +L F
Sbjct: 1098 ALPIYYSEIMATWGD--VPAIHQNGEILGF 1125



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 111/296 (37%), Gaps = 34/296 (11%)

Query: 123 LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
           L  P+FT  P           T  C+A+G    +  W  N   I  AP     +   N  
Sbjct: 23  LEQPFFTTNPIGTTVINSNRHTISCRATGTMPIDYGWEINDTAI-YAP-----EWSSNSY 76

Query: 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRV 242
           T   + KS+ G Y C A+N +G V        +A+      AP+      G   +LTC  
Sbjct: 77  TFTTIGKSNIGVYRCVASNVVGTVISRGAEIHVAYFETYGGAPQTTMVSAGAAKILTCPP 136

Query: 243 FGA-PKPEVNWIHNQKELTGGRYTILETGD--LKITDVAFADSGEYTCFARNKL-GTAQG 298
           + + P P V W  N  ++  G   ++ T D  L +        G YTC A N + G  Q 
Sbjct: 137 YDSYPIPTVTWQFNGTDIILGPDQLV-TADQRLVLLQATSQRQGSYTCNANNNVYGYTQT 195

Query: 299 SGSLTVKEHTHITD----------QPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGS 347
           S S+ +      T            P    V  GQS     C   + P   L I W +  
Sbjct: 196 SPSVMLTVQGTFTPPAFIAPTLVLPPSSTVVRPGQSFVQMECIISAHPLSSLQISWQKDG 255

Query: 348 EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTC---RAQTELDFIEAQATLTVQV 400
           E +D         +    L +   +E ++G Y C    A + +  +EA A LT+ +
Sbjct: 256 EGLD---------ATGAILKIFNPTEANAGTYRCIGDLAGSGMPAVEASANLTMYI 302



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 64/148 (43%), Gaps = 8/148 (5%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP E PS  T +    +    +SW P S +S  G  +GYKV  W     +   R  IV +
Sbjct: 1483 VPSEPPSAVT-VATTGSSAFQISWVPPSTESQNGGLQGYKVLYWENHSRQA--RATIVQQ 1539

Query: 460  -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
                   +T   +D     ++    V  FN A +GP S      T E VP  V SL+   
Sbjct: 1540 TKTFPASATVATLDDLECFTEYGISVKGFNAAGDGPGSPTSYSTTGEDVPSEVSSLQFSQ 1599

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
            +  S+  + W  P  P G ++ YK+ YQ
Sbjct: 1600 VRMSSLKVSWGPPTSPCGTIIQYKLFYQ 1627



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 83/216 (38%), Gaps = 17/216 (7%)

Query: 382  RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            +  TE D  E   T+T   P            I     +V+W P       G   GY  Q
Sbjct: 1376 QTTTEQDIPEGVPTITGATP------------ITVTSLLVTWQPPLQAQTNGPLTGYSFQ 1423

Query: 442  TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
             + +  G GS  E  ++    T  E+   V       ++ A N    GP S  +     E
Sbjct: 1424 -FRQLPG-GSFMEETISDAGVTEHELLNLVRYQNYEVKLAATNSIGLGPYSAPVYVYIGE 1481

Query: 502  GVPGTVQSLEAIPL-GSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
             VP    S   +   GSSAF + WV P  E  NG L GYK+ Y      +    + +   
Sbjct: 1482 AVPSEPPSAVTVATTGSSAFQISWVPPSTESQNGGLQGYKVLYWENHSRQARATIVQQTK 1541

Query: 559  ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
                + T A L  LE  T+Y I + G+  AGDG  S
Sbjct: 1542 TFPASATVATLDDLECFTEYGISVKGFNAAGDGPGS 1577


>gi|149728474|ref|XP_001493497.1| PREDICTED: contactin-3 [Equus caballus]
          Length = 1026

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 171/632 (27%), Positives = 272/632 (43%), Gaps = 50/632 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P   S +I    +   L I + +  D GSY 
Sbjct: 237 AAKGSTVKLECFALGNPIPQINWRRSDGLPF--SSKIKSRKFNGVLEIPNFQQEDAGSYE 294

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    + +  A E+ + +EC+ASG P+P   W+ NG
Sbjct: 295 CLAENSRGKNVARG-RLTYYAKPHWVQLIKDVEIAVEDNLYWECRASGKPKPSYRWLKNG 353

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + +       R ++    +TI NL  +D+G + C A N  G VY    + V+A AP+ ++
Sbjct: 354 EALVL---EERIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVVAAAPDFSK 410

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
            P  +      G  V L C+   +P+   +W      +    R + L+ G LKI +V  A
Sbjct: 411 TPMKKLIQVQVGSVVSLDCKPRASPRALSSWKKGDAIVQENERISFLKGGGLKIANVTKA 470

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L + 
Sbjct: 471 DVGTYTCIAENQFGKANGTTYLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDIM 530

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 531 FTWYFNGALTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADL 590

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
            V+     P N  + ++ D   A +SW       +PV   S++       G++  T    
Sbjct: 591 IVRGSPGPPENVKVDEITDT-TAQLSWKEGTDNHSPVISYSVQARTPFSVGWQTAT---- 645

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 646 ----TVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 699

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S  +   GS S   + W  V  E  NG   GY + ++ +  T     ++ +    D 
Sbjct: 700 VPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTN---WIQTVVTSPDT 756

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y + +  Y   G+G  S    +F     P   P  V     + + 
Sbjct: 757 PRYVFRNESIMPFSLYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSE 816

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FWRRHNTGE 648
           + +SW A+P    N     Y + +W  +N GE
Sbjct: 817 IEVSWNAVPWKLSNGHLLGYEVRYW--NNGGE 846



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 160/692 (23%), Positives = 264/692 (38%), Gaps = 100/692 (14%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +   +RI   N   +L I ++  +D G + C   N  G   
Sbjct: 337 CRASGKPKPSYRWLKNGEALVLEERIQIEN--GALTISNLNVTDSGMFQCIAENKHGLVY 394

Query: 115 SYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPN 172
           S +    V AAP F+  P  + I       V+ +CK    P     W   G  I Q   N
Sbjct: 395 SSAELKVVAAAPDFSKTPMKKLIQVQVGSVVSLDCKPRASPRALSSW-KKGDAIVQE--N 451

Query: 173 PRRK-VGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
            R   +    + I N+ K+D G Y C A N  G      Y+ V+     IT AP +    
Sbjct: 452 ERISFLKGGGLKIANVTKADVGTYTCIAENQFGKANGTTYL-VVTEPTRITLAPSNMDVS 510

Query: 232 DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
            G++V+L C+V   P  ++   W  N             E  GG      +GDL I ++ 
Sbjct: 511 VGESVILPCQVQHDPLLDIMFTWYFNGALTDFKKDGSHFEKVGGS----SSGDLMIRNIQ 566

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
              SG+Y C  +  + +   +  L V+                G     + + ++D + +
Sbjct: 567 LKHSGKYVCMVQTGVDSVSSAADLIVRG-------------SPGPPENVKVDEITDTTAQ 613

Query: 339 LSIVWLRGSEP----IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ-----TELDF 389
           LS  W  G++     I +  + R   S  +    T    +D   +T          E +F
Sbjct: 614 LS--WKEGTDNHSPVISYSVQARTPFSVGWQTATTVPEVIDGKTHTATVVELNPWVEYEF 671

Query: 390 --------------IEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH- 434
                         + ++   T +   E P +          + V++W+PV  +   G  
Sbjct: 672 RVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEG 731

Query: 435 ------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
                 FR   V  W +           V + ES        +P S    +V  +N    
Sbjct: 732 FGYVVAFRPLGVTNWIQTVVTSPDTPRYVFRNES-------IMPFSLYEVKVGVYNNKGE 784

Query: 489 GPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
           GP S + +  + E  P    S + A  L SS   + W  V  +  NG L+GY+++Y +  
Sbjct: 785 GPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNAVPWKLSNGHLLGYEVRYWNNG 844

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV----- 600
           G +   L  ++    +   TSA+L GL+ +  Y   +  Y  AG G  S  +        
Sbjct: 845 GEE--ELSSKVKVAGN--ETSARLRGLKSNLAYYTAVRAYNSAGTGPFSDTVNATTKKTP 900

Query: 601 PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ 660
           P + P NV    +T   ++++W  +  +E+ +    Y++F+R  +         VL+  +
Sbjct: 901 PSQPPGNVVWN-ATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQSNV----QVLNTNK 955

Query: 661 --SELVLANQPTFQPYEIKVVQTWTEKDGEGS 690
             +EL+L   P  + Y I+V  T    DG  S
Sbjct: 956 TSAELLL---PIKEDYIIEVKATTDGGDGTSS 984



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 166/420 (39%), Gaps = 38/420 (9%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS-DQGSY 102
           V   +KKV L C   G P P   W  +G  IN S        G +L++ +   + D GSY
Sbjct: 37  VGSEDKKVTLNCEARGNPSPHYRWQLNGSDINLSMEYRYKLNGGNLVVLNPNRNWDTGSY 96

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEI 157
            C  +N +G   S    L       F T     ++  E + V   C   G P    E   
Sbjct: 97  QCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLC---GPPPHSGELSY 153

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDVYVN 213
            W+ N  P S    + RR V      + I  +  SD GNY C  T+++    V       
Sbjct: 154 AWIFNEYP-SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNARVLGSPTPL 212

Query: 214 VL-------AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           VL        + P+I  + P+      G TV L C   G P P++NW  +       +  
Sbjct: 213 VLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIK 272

Query: 266 ILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
             +  G L+I +    D+G Y C A N  G     G LT     H     +D E+    +
Sbjct: 273 SRKFNGVLEIPNFQQEDAGSYECLAENSRGKNVARGRLTYYAKPHWVQLIKDVEIAVEDN 332

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             + C A   P  K S  WL+  E +  E     +Q  + +LT++  +  DSG + C A+
Sbjct: 333 LYWECRASGKP--KPSYRWLKNGEALVLEER---IQIENGALTISNLNVTDSGMFQCIAE 387

Query: 385 TELDFIEAQATLTVQVPLEAPSNFT------LIQVIDAKKAVVSWNP-VSPQSLRGHFRG 437
            +   + + A L V   + A  +F+      LIQV       +   P  SP++L    +G
Sbjct: 388 NKHGLVYSSAELKV---VAAAPDFSKTPMKKLIQVQVGSVVSLDCKPRASPRALSSWKKG 444



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 129/313 (41%), Gaps = 32/313 (10%)

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            VG  +  S    +L  P F  EP    F   +E++ VT  C+A G P P   W  NG  
Sbjct: 7   AVGLGRKESTRELLLQGPVFIREPSNSIFPVGSEDKKVTLNCEARGNPSPHYRWQLNGSD 66

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           I+ +     +  G N + +   R  DTG+Y C ATNSLG +         A+        
Sbjct: 67  INLSMEYRYKLNGGNLVVLNPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTKM 126

Query: 226 KDEYTV-DGKTVVLTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKIT 275
           +   +V +G+ VVL C     P P        WI N+     E    R+   ETG L I 
Sbjct: 127 RSTVSVREGQGVVLLC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIA 182

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQS 324
            V  +D G YTC   + +  A+  GS   L ++    + +         PE      G +
Sbjct: 183 KVEPSDVGNYTCVVTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGST 242

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
               C A+ +P  +++  W R S+ + F S+ +  + N   L +    + D+G Y C A+
Sbjct: 243 VKLECFALGNPIPQIN--WRR-SDGLPFSSKIKSRKFNGV-LEIPNFQQEDAGSYECLAE 298

Query: 385 TELDFIEAQATLT 397
                  A+  LT
Sbjct: 299 NSRGKNVARGRLT 311


>gi|345786234|ref|XP_003432800.1| PREDICTED: contactin-4 isoform 2 [Canis lupus familiaris]
          Length = 807

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 191/727 (26%), Positives = 293/727 (40%), Gaps = 112/727 (15%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P  IW + DG PI    R  + N    L I + +  D G Y C   N 
Sbjct: 24  VKLECFALGNPVPTIIWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGLYECVAENS 81

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P +  +   I+ A EE V +ECKA+G P+P   W+ NG+P+   
Sbjct: 82  RGKNVARG-QLTFYAQPNWIQKINDIHVAIEENVFWECKANGRPKPTYRWLKNGEPLLT- 139

Query: 170 PPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
               R ++    G   ITI NL  SD G Y C A N  G ++    ++V+A  P+ +   
Sbjct: 140 ----RDRIQIEQGMLNITIVNL--SDAGMYQCVAENKHGVIFSSAELSVIAVGPDFSRTL 193

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADS 282
               T+   G  VV+ C+   +PKP   W   +  L    R TI E G L+I +V  +D+
Sbjct: 194 LKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDILRENERITISEDGSLRIVNVTKSDA 253

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   
Sbjct: 254 GSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFT 313

Query: 343 WLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           W      IDF+ +         Q +   L +       +G+Y C  QT +D + A A L 
Sbjct: 314 WSFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLI 373

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGE 449
           V+ P   P   T+ ++ D   A +SW P     SP ++      Y +Q  T         
Sbjct: 374 VRGPPGPPEGVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFSVGWQAV 426

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTP 500
            ++ ELI   G++ T  V    P  +   R +A N    G PS         E +  VTP
Sbjct: 427 NTVPELI--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTP 484

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
             V G   S        S   + W  V  E  NG   GY + ++       G ++  L  
Sbjct: 485 ANVSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFRP-----YGKMIWMLTV 532

Query: 559 I--SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGR 611
           +  +D +    +   + P + + + +  +   G+G  S           P K P ++  R
Sbjct: 533 LASADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFAR 592

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
             +  ++ + W +  E                                       N+   
Sbjct: 593 SLSATDIEVFWASPME--------------------------------------KNRGRI 614

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
           Q YE+K    W   D E + R+ I   G  T+T++     ++     V A+N A  GP S
Sbjct: 615 QGYEVKY---WRHDDKEENARK-IRTIGNQTSTKITNLKGSALYHLAVKAYNTAGTGPSS 670

Query: 732 EIISFVT 738
             ++  T
Sbjct: 671 ATVNVTT 677



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 148/584 (25%), Positives = 217/584 (37%), Gaps = 75/584 (12%)

Query: 132 PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKS 190
           PE +  A+  TV  EC A G P P I W   +GKPI++     RR      + I N ++ 
Sbjct: 13  PETVPTAKGTTVKLECFALGNPVPTIIWRRADGKPIAR---KARRHKSNGILEIPNFQQE 69

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A NS G       +   A  P   +   D +    + V   C+  G PKP  
Sbjct: 70  DAGLYECVAENSRGKNVARGQLTFYAQ-PNWIQKINDIHVAIEENVFWECKANGRPKPTY 128

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N + L       +E G L IT V  +D+G Y C A NK G    S  L+V     I
Sbjct: 129 RWLKNGEPLLTRDRIQIEQGMLNITIVNLSDAGMYQCVAENKHGVIFSSAELSV-----I 183

Query: 311 TDQPEDYE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
              P+           V+ G      C   + P  K    W +G + I  E+E R   S 
Sbjct: 184 AVGPDFSRTLLKRVTLVKVGGEVVIECKPKASP--KPVYTWKKGRD-ILRENE-RITISE 239

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVS 422
           D SL +   ++ D+G YTC A        +   L V+ P       + + V   +  V+ 
Sbjct: 240 DGSLRIVNVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLP 299

Query: 423 WNPVSPQSL----RGHFRGYKVQTWTEKD------GEGSIRELIVNKGE---------ST 463
                  SL       F G+ +    + D      G+ S  +L++   +           
Sbjct: 300 CQVTHDHSLDIVFTWSFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMV 359

Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYL 522
            T VDK   A+    R         GPP         E    T Q S    P   S   +
Sbjct: 360 QTSVDKLSAAADLIVR---------GPPGPPEGVTIDEITDTTAQLSWRPGPDNHSPITM 410

Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
             ++   P      + + +Q+V           +P + D  T +A + GL P  +Y    
Sbjct: 411 YVIQARTP------FSVGWQAVN---------TVPELIDGKTFTATVVGLNPWVEYEFRT 455

Query: 583 AGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
                 G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F 
Sbjct: 456 VAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFG 515

Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
           Y + +R +     W    +     S  V  N+    F P+E+KV
Sbjct: 516 YVVAFRPYGK-MIWMLTVLASADASRYVFRNESVRPFSPFEVKV 558



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 23/191 (12%)

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
           RG  +GY+V+ W   D E + R+ I   G  T+T++     ++     V A+N A  GP 
Sbjct: 611 RGRIQGYEVKYWRHDDKEENARK-IRTIGNQTSTKITNLKGSALYHLAVKAYNTAGTGPS 669

Query: 492 SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
           S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 670 SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNR 725

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
            +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P    
Sbjct: 726 QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIP--KI 773

Query: 606 DNVEGRGSTPN 616
            N   RG+ P+
Sbjct: 774 SNAYARGAGPS 784


>gi|410920629|ref|XP_003973786.1| PREDICTED: contactin-4-like [Takifugu rubripes]
          Length = 1022

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 172/642 (26%), Positives = 257/642 (40%), Gaps = 78/642 (12%)

Query: 45  ALRNKK---VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQG 100
           ALR  K   V+L C   G P+P   W + DG P+    +I   +    L I +    D G
Sbjct: 235 ALRVSKGSSVKLECFALGNPVPSISWRRADGNPL--PGKIKINHSAGVLEIPYFRPEDAG 292

Query: 101 SYTCEVSNGVGE--AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            Y C   N  G   A+   +  +V    +     +  + A +  + +ECKA G P P   
Sbjct: 293 VYECVAENSRGRNVARGQLLFQNVEHLHWLHTLRD-ADIAIDAGLQWECKAMGNPRPTYK 351

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+ ++      R ++   ++TI  +   D+G Y C A N  G +Y    + V+A  
Sbjct: 352 WLKNGQMLTA---EGRARIDAGKLTISRISLLDSGMYQCVAQNEHGSIYASAELKVVASP 408

Query: 219 PEITEAPKDEYTV--DGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKIT 275
           P+ T  P  + TV   G   VL CR   +P+  ++W    + L    R TI++ G L+IT
Sbjct: 409 PDFTLRPVKKSTVVQRGGEAVLECRPRASPRAAISWWRGGQLLMDAERQTIMDDGTLRIT 468

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           +++ AD+G YTC ARN  G++  +G+L VKE T IT  P   +V  GQS    C   SD 
Sbjct: 469 NISKADAGRYTCVARNHFGSSSSTGTLVVKEPTRITVPPLSLDVTTGQSLVLPCEVSSDS 528

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSND---YSLTVTKSSELDSGQYTCRAQTELDFIEA 392
           SL     W    + IDF  +  F          L V       SG+Y C   TE+D + A
Sbjct: 529 SLNPKFKWFFNGKAIDFSRQEHFEMIGKGFAGDLMVRNIQLKHSGKYVCMVHTEVDTVSA 588

Query: 393 QATLTVQVPLEAPSNFTLIQVIDAKKAVVSW----NPVSPQSLRGHFRGYKVQTWTEKDG 448
            A LTV+ P  AP    +  + D+    +SW    +  SP ++      Y VQ  T    
Sbjct: 589 AAELTVRGPPGAPEGLAVTHITDS-TVQLSWGSGPDNHSPVTM------YMVQARTP--- 638

Query: 449 EGSIRELIVNKGESTTTEVDKFVPASKNFA-------------RVLAFNGAYNGPPSEII 495
                    + G  T   V   VP     A             RV+A N    G PS   
Sbjct: 639 --------FSIGWQTVATVPDSVPGQMMHATVKGLNPWVDYEFRVVAINSVGVGEPSTRT 690

Query: 496 SFV-TPEGVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTK--- 548
             + T   VP     S+           + W  V  E   G   GY + ++ V  +    
Sbjct: 691 KQIRTKAAVPKVAPVSVSGGGGARGELVITWEPVSEEHQGGEDFGYVMAFRPVGSSTWIQ 750

Query: 549 ---VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV----- 600
                P   R  Y  D          + P T++ + +  Y   G+G  S  +        
Sbjct: 751 TVVASPEASRYIYKDD---------NIAPLTQFEVKVGVYNSNGEGQFSHVVRVFSAEEE 801

Query: 601 PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI-FW 641
           P + P +V  R ++ + + + W  +P          Y I FW
Sbjct: 802 PSEAPSSVWARAASASEIEVHWKRIPPGSSRGKILAYEILFW 843



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 144/597 (24%), Positives = 228/597 (38%), Gaps = 78/597 (13%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V N +  A  +S    V+           P   V+ P+ +  +
Sbjct: 180 LYIAKVEASDVGNYTCAVRNMMTNATVFSSPAPVVVRRDAVMGEYEPKIEVQFPDALRVS 239

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  +V  EC A G P P I W   +G P+   P   +       + I   R  D G Y C
Sbjct: 240 KGSSVKLECFALGNPVPSISWRRADGNPL---PGKIKINHSAGVLEIPYFRPEDAGVYEC 296

Query: 198 NATNSLG--YVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G       +    + H   +      +  +D   +   C+  G P+P   W+ N
Sbjct: 297 VAENSRGRNVARGQLLFQNVEHLHWLHTLRDADIAIDAG-LQWECKAMGNPRPTYKWLKN 355

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
            + LT      ++ G L I+ ++  DSG Y C A+N+ G+   S  L  V      T +P
Sbjct: 356 GQMLTAEGRARIDAGKLTISRISLLDSGMYQCVAQNEHGSIYASAELKVVASPPDFTLRP 415

Query: 315 --EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
             +   V+ G  A   C   + P  + +I W RG + +  ++E + +  +D +L +T  S
Sbjct: 416 VKKSTVVQRGGEAVLECRPRASP--RAAISWWRGGQ-LLMDAERQTIM-DDGTLRITNIS 471

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           + D+G+YTC A+       +  TL V+ P         + V   +  V+     S  SL 
Sbjct: 472 KADAGRYTCVARNHFGSSSSTGTLVVKEPTRITVPPLSLDVTTGQSLVLPCEVSSDSSLN 531

Query: 433 GHFR--------GYKVQTWTEKDGEGSIRELIVNKGE---------STTTEVDKFVPASK 475
             F+         +  Q   E  G+G   +L+V   +            TEVD    A++
Sbjct: 532 PKFKWFFNGKAIDFSRQEHFEMIGKGFAGDLMVRNIQLKHSGKYVCMVHTEVDTVSAAAE 591

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW-VKPEQPNGVL 534
                                 +T  G PG  + L    +  S   L W   P+  + V 
Sbjct: 592 ----------------------LTVRGPPGAPEGLAVTHITDSTVQLSWGSGPDNHSPVT 629

Query: 535 MGYKIKYQ---SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           M Y ++ +   S+    V  + + +P         A + GL P   Y   +      G G
Sbjct: 630 M-YMVQARTPFSIGWQTVATVPDSVP----GQMMHATVKGLNPWVDYEFRVVAINSVGVG 684

Query: 592 AES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
             S      +    VP   P +V G G     LVI+W  + E       F Y + +R
Sbjct: 685 EPSTRTKQIRTKAAVPKVAPVSVSGGGGARGELVITWEPVSEEHQGGEDFGYVMAFR 741



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 166/709 (23%), Positives = 275/709 (38%), Gaps = 91/709 (12%)

Query: 20  IATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR 79
           +A G    QN       +  R  ++A+ +  ++  C   G P P   W K+G  +    R
Sbjct: 306 VARGQLLFQNVEHLHWLHTLRDADIAI-DAGLQWECKAMGNPRPTYKWLKNGQMLTAEGR 364

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAP-YFTVEPEFINAA 138
            ++ + GK L I  +   D G Y C   N  G   + S +L V+A+P  FT+ P   +  
Sbjct: 365 -ARIDAGK-LTISRISLLDSGMYQCVAQNEHGSIYA-SAELKVVASPPDFTLRPVKKSTV 421

Query: 139 EEE--TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
            +       EC+    P   I W   G+ +  A        G  RIT  N+ K+D G Y 
Sbjct: 422 VQRGGEAVLECRPRASPRAAISWWRGGQLLMDAERQTIMDDGTLRIT--NISKADAGRYT 479

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFG--APKPEVNWIH 254
           C A N  G         V+     IT  P       G+++VL C V    +  P+  W  
Sbjct: 480 CVARNHFGS-SSSTGTLVVKEPTRITVPPLSLDVTTGQSLVLPCEVSSDSSLNPKFKWFF 538

Query: 255 NQKELTGGRYTILE------TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK--- 305
           N K +   R    E       GDL + ++    SG+Y C    ++ T   +  LTV+   
Sbjct: 539 NGKAIDFSRQEHFEMIGKGFAGDLMVRNIQLKHSGKYVCMVHTEVDTVSAAAELTVRGPP 598

Query: 306 ------EHTHITDQPEDYEVEAG----QSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE 355
                   THITD        +G       T        P    SI W   +   D  S 
Sbjct: 599 GAPEGLAVTHITDSTVQLSWGSGPDNHSPVTMYMVQARTP---FSIGWQTVATVPD--SV 653

Query: 356 P-RFVQSN--------DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPS 406
           P + + +         DY   V   + +  G+ + R +        Q      VP  AP 
Sbjct: 654 PGQMMHATVKGLNPWVDYEFRVVAINSVGVGEPSTRTK--------QIRTKAAVPKVAP- 704

Query: 407 NFTLIQVIDAKKA----VVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGES 462
               + V     A    V++W PVS +   G   GY +       G  +  + +V   E+
Sbjct: 705 ----VSVSGGGGARGELVITWEPVSEEHQGGEDFGYVMAF--RPVGSSTWIQTVVASPEA 758

Query: 463 T--TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEAIPLGSSA 519
           +    + D   P ++   +V  +N    G  S ++   + E  P     S+ A    +S 
Sbjct: 759 SRYIYKDDNIAPLTQFEVKVGVYNSNGEGQFSHVVRVFSAEEEPSEAPSSVWARAASASE 818

Query: 520 FYLKW--VKPEQPNGVLMGYKIKY--QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
             + W  + P    G ++ Y+I +     + ++ G    R+  IS    T+A L+GL+ +
Sbjct: 819 IEVHWKRIPPGSSRGKILAYEILFWEDGSRPSEAG----RVRIIS---ATTALLSGLKAN 871

Query: 576 TKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNLVISWTAMPEIEH 630
           T Y+I +     AG G  S           P + P+N+E +  T + + ++W  +  +E+
Sbjct: 872 TAYQISVRAQNSAGFGPGSAAFIVTTKKPPPNRPPENIEWK-LTNSKIFLNWEHVKTMEN 930

Query: 631 NAPHFKYRIFWRRHNTGEAWN-QDDVLDWRQSELVLANQPTFQPYEIKV 678
            +    Y++ +R     +AWN    VL+  ++ + L   PT   Y I++
Sbjct: 931 ESEVTGYKVVYR-----QAWNGMTSVLETNKTSVEL-QIPTGDNYLIEI 973



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 121/307 (39%), Gaps = 48/307 (15%)

Query: 125 APYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P FT EP    F    +++ V   C+A G P P   W  NG+ I+        + GPN 
Sbjct: 24  GPVFTQEPSDSVFPLNTDDKQVFINCRAKGNPPPHYRWTVNGRAITA-------ESGPNY 76

Query: 182 ITIE-NLRKSD------TGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
             +E NL  ++       G Y C ATN+ G +         A     +  P++  +V +G
Sbjct: 77  SLVEGNLLITNPHVVNHRGVYQCIATNTFGTIVSREAKVEFAFLENFSGKPRNTVSVREG 136

Query: 234 KTVVLTCRVFGAP----KPEVNWIHNQK----ELTGGRYTILETGDLKITDVAFADSGEY 285
           + VVL C   G P    + + +W+ N +    +    R+    TGDL I  V  +D G Y
Sbjct: 137 QAVVLLC---GPPLHYGEIKYSWVFNGQRSFLQQDARRFISQRTGDLYIAKVEASDVGNY 193

Query: 286 TCFARNKL--GTAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSD 334
           TC  RN +   T   S +  V     +  +         P+   V  G S    C A+ +
Sbjct: 194 TCAVRNMMTNATVFSSPAPVVVRRDAVMGEYEPKIEVQFPDALRVSKGSSVKLECFALGN 253

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYS--LTVTKSSELDSGQYTCRAQTELDFIEA 392
           P    SI W R     D    P  ++ N  +  L +      D+G Y C A+       A
Sbjct: 254 PV--PSISWRRA----DGNPLPGKIKINHSAGVLEIPYFRPEDAGVYECVAENSRGRNVA 307

Query: 393 QATLTVQ 399
           +  L  Q
Sbjct: 308 RGQLLFQ 314


>gi|390335185|ref|XP_003724086.1| PREDICTED: titin-like [Strongylocentrotus purpuratus]
          Length = 1532

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/386 (29%), Positives = 178/386 (46%), Gaps = 27/386 (6%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P+  Y     +V L  +++ L C+  G+P+PQ  W K+   + P +R S  ++G+ LII 
Sbjct: 619 PEMVYYPETTKVGLEGEQLSLKCLAVGSPVPQIWWEKEDAEL-PHNRSSHTSFGQELIIS 677

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGL 152
            ++  D G Y C   NG G     S+ L+V A+PY+  EP  +        +F C A G 
Sbjct: 678 SLKLEDAGLYRCIADNGAGVRAESSVTLTVKASPYWESEPVSLTVPVGSPASFICVARGD 737

Query: 153 PEPEIHWVHNGKPISQAPPNPRRKV----GPNRITIENLRKSDTGN-YGCNATNSLGYVY 207
           P P I W+ N +P  +     +  +    G   + +      D+ +   C A+N  G + 
Sbjct: 738 PTPAITWLINNQPADEVSEALKLDLVAEPGHGTLRVNKTVDVDSSSAVQCVASNRYGTII 797

Query: 208 KDVYVNVLAHAPEITE-APKDEYTVDGKTVVLTCRVFGAPKPEVNWIH--NQKELTGGRY 264
            + ++ VLA AP   E AP +   ++G TV L C+  GAP P V+W +    K    GR+
Sbjct: 798 SNAHLTVLALAPVFRENAPSEVLVLEGDTVHLQCQGVGAPSPTVSWWNGLGDKVANEGRF 857

Query: 265 TILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
            +   G L I D+   D  +Y C   NK G       L ++  T +T+ P D  + AG  
Sbjct: 858 RMRADGSLVICDIKMTDERDYKCKIENKFGYETSKTQLFIRRRTQMTNPPTDTRIPAGDQ 917

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQ-----SNDYSLTVTKSSELDSGQY 379
               C   SDP+  +S  W+           PR +Q       D SL +   S+ D G Y
Sbjct: 918 LFLPCAVTSDPAHHISFTWMT----------PRGLQVSVGSGGDGSLRIETVSDEDQGLY 967

Query: 380 TCRAQTELDFIEAQATLTVQ---VPL 402
           TC A++ LD + A A + V+   +PL
Sbjct: 968 TCTAKSALDSVSASALVVVEERSIPL 993



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 159/375 (42%), Gaps = 31/375 (8%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDG----VPINPSDRISQGNYGKSLIIKHVEFSDQGS 101
           +R K ++L C   G+ +    W KDG    +  +P   ++ GN    L I+  +  D G 
Sbjct: 439 VRAKDLQLHCEASGSSVIGYTWLKDGEELDIQSDPRMILNHGN----LTIQFPDSGDIGI 494

Query: 102 YTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEE-TVTFECKAS-GLPEPEIHW 159
           Y C VSN      S    +       F+  P  I       +V   C     +P P + W
Sbjct: 495 YRCLVSNIYTTIVSSESSVRRAFMGSFSPGPGTIREVTVGISVILACNPPLSVPNPLVMW 554

Query: 160 VHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNATNS-LGYVYKDVYVNVL 215
             N    S  P N  R+V  +    + I ++ + DTG Y C   N  +    +   +N++
Sbjct: 555 ALN---TSAEPINYSRRVSQDPKGNLIIASVEEQDTGLYYCIVVNEIMERRIESPRINLI 611

Query: 216 ----AHAPEITEAPK-DEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETG 270
               A  PE+   P+  +  ++G+ + L C   G+P P++ W     EL   R +    G
Sbjct: 612 IRKPAQPPEMVYYPETTKVGLEGEQLSLKCLAVGSPVPQIWWEKEDAELPHNRSSHTSFG 671

Query: 271 -DLKITDVAFADSGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
            +L I+ +   D+G Y C A N  G  A+ S +LTVK   +   +P    V  G  A+F 
Sbjct: 672 QELIISSLKLEDAGLYRCIADNGAGVRAESSVTLTVKASPYWESEPVSLTVPVGSPASFI 731

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEP----RFVQSNDYSLTVTKSSELDSGQYT-CRA 383
           C A  DP+   +I WL  ++P D  SE        +    +L V K+ ++DS     C A
Sbjct: 732 CVARGDPT--PAITWLINNQPADEVSEALKLDLVAEPGHGTLRVNKTVDVDSSSAVQCVA 789

Query: 384 QTELDFIEAQATLTV 398
                 I + A LTV
Sbjct: 790 SNRYGTIISNAHLTV 804



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 139/358 (38%), Gaps = 26/358 (7%)

Query: 61  PLPQTIWSKD--GVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSI 118
           P P  +W+ +    PIN S R+SQ   G +LII  VE  D G Y C V N + E +  S 
Sbjct: 548 PNPLVMWALNTSAEPINYSRRVSQDPKG-NLIIASVEEQDTGLYYCIVVNEIMERRIESP 606

Query: 119 DLSVL-----AAPYFTVEPEFINAA-EEETVTFECKASGLPEPEIHWVHNGKPISQAPPN 172
            ++++       P     PE      E E ++ +C A G P P+I W    K  ++ P N
Sbjct: 607 RINLIIRKPAQPPEMVYYPETTKVGLEGEQLSLKCLAVGSPVPQIWW---EKEDAELPHN 663

Query: 173 PRRKVG-PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
                     + I +L+  D G Y C A N  G   +      +  +P     P      
Sbjct: 664 RSSHTSFGQELIISSLKLEDAGLYRCIADNGAGVRAESSVTLTVKASPYWESEPVSLTVP 723

Query: 232 DGKTVVLTCRVFGAPKPEVNWIHNQK---ELTGGRYTILET----GDLKITDVAFADSGE 284
            G      C   G P P + W+ N +   E++      L      G L++      DS  
Sbjct: 724 VGSPASFICVARGDPTPAITWLINNQPADEVSEALKLDLVAEPGHGTLRVNKTVDVDSSS 783

Query: 285 YT-CFARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
              C A N+ GT   +  LTV     +   + P +  V  G +   +C  V  PS  +S 
Sbjct: 784 AVQCVASNRYGTIISNAHLTVLALAPVFRENAPSEVLVLEGDTVHLQCQGVGAPSPTVS- 842

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            W  G       +E RF    D SL +      D   Y C+ + +  +  ++  L ++
Sbjct: 843 -WWNGLGD-KVANEGRFRMRADGSLVICDIKMTDERDYKCKIENKFGYETSKTQLFIR 898


>gi|351705488|gb|EHB08407.1| Contactin-1 [Heterocephalus glaber]
          Length = 1140

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 188/725 (25%), Positives = 298/725 (41%), Gaps = 84/725 (11%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 322 PADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 379

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 380 NIQLEDEGLYECEAENIRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 435

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 436 TGKPIPTIRWLKNGYAYHKG------ELRLYDVTFEN-----AGMYQCIAENTYGAIYAN 484

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 485 AELKILALAPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 544

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 545 WEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENAT 604

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN-----DYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ +W      IDF  E    Q N     +  L +  +    +G+YTC
Sbjct: 605 MQCAASFDPALDLTFIWSFNGYVIDFTKENIHYQRNFMLDANGELLIRNAQLRHAGRYTC 664

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            AQT +D   A A L V+ P   P     I+ I A    ++W+  S          Y +Q
Sbjct: 665 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYTIQ 721

Query: 442 TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           T T    D + +  +  + +G          +P  +   RVLA N    G PS   + + 
Sbjct: 722 TKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVLATNTLGMGEPSIPSNRIK 781

Query: 500 PEGVPGTVQSLEAIPLGSS--AFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
            +G    V   +    G S     + W  +  E   G   GY + ++   G +   +   
Sbjct: 782 TDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGDEWKKVT-- 839

Query: 556 LPYISDPTTTS--AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS 613
              +++P T     K   + PST +++ +  +   GDG  S  L  V +   D       
Sbjct: 840 ---VTNPDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYS--LIAVIYSAQD---APNE 891

Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
            P ++ +   +  EI   + H+K+ +                            +   + 
Sbjct: 892 APTDVGVKVLSSSEI---SVHWKHVV----------------------------EKIVES 920

Query: 674 YEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 733
           Y+I+    W   D E +   + V   E  +  ++  +P ++ F  V A N A  GPPSE+
Sbjct: 921 YQIRY---WAAHDKEAAAHRVQVTSQE-YSARLENLLPDTQYFVEVGACNSAGCGPPSEV 976

Query: 734 ISFVT 738
           I   T
Sbjct: 977 IETFT 981



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 146/379 (38%), Gaps = 45/379 (11%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   ++  SDR S    G +L+I + +   D G Y C  S
Sbjct: 47  KVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 104

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    L+     P+   E   +   E + +   C      +P  H        
Sbjct: 105 NNYGMVRSTEATLNFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 158

Query: 159 WVHNGKPISQAPPNPRRKVGPNR--ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 159 WLLNEFPVFITM-DKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 215

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 216 LIPIPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 275

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH-----ITDQPEDYEVE 320
                 LKI ++   D G Y C A N  G  +    + V+  T      I  Q +D    
Sbjct: 276 STSGAVLKIFNIQLEDEGLYECEAENIRGKDKHQARIYVQGTTKPYPADIVVQFKDIYAL 335

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
            GQ+ T  C A+ +P     I W +  EP+   +E   + ++   L +      D G Y 
Sbjct: 336 MGQNVTLECFALGNPV--PDIRWRKVLEPMPSTAE---ISTSGAVLKIFNIQLEDEGLYE 390

Query: 381 CRAQTELDFIEAQATLTVQ 399
           C A+      + QA + VQ
Sbjct: 391 CEAENIRGKDKHQARIYVQ 409



 Score = 44.3 bits (103), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 8/144 (5%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P EAP++   ++V+ + +  V W  V  + +      Y+++ W   D E +   + V   
Sbjct: 889  PNEAPTDVG-VKVLSSSEISVHWKHVVEKIVES----YQIRYWAAHDKEAAAHRVQVTSQ 943

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
            E  +  ++  +P ++ F  V A N A  GPPSE+I   T +  P     + +     S +
Sbjct: 944  E-YSARLENLLPDTQYFVEVGACNSAGCGPPSEVIETFTRKAPPSQPPRIISSVRSGSRY 1002

Query: 521  YLKW--VKPEQPNGVLMGYKIKYQ 542
             + W  V        + GYK+ Y+
Sbjct: 1003 IISWDHVVALSNESSVTGYKVLYR 1026


>gi|126336359|ref|XP_001373886.1| PREDICTED: contactin-6 [Monodelphis domestica]
          Length = 1033

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 187/724 (25%), Positives = 302/724 (41%), Gaps = 94/724 (12%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   ++L C   G P+P   W K DG P+  + +I        + I + +  D+GSY 
Sbjct: 244 AAKGSTIKLECFALGNPVPDISWRKLDGSPL--ARKIQYSKSKGMIAIPNFQEEDEGSYE 301

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G   +    L   A P +  + +  + +  +++ +EC+ASG P P   W+ NG
Sbjct: 302 CIAGNLRGRNIARG-QLFFYALPEWDKKIQNTDLSLYDSLLWECRASGSPIPSYTWLKNG 360

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           +PI    P  R  +    + I  L  SD+G Y C A N    +Y +  + V A AP+ ++
Sbjct: 361 EPIV---PEDRIHIENGSLMITVLNLSDSGFYQCVAENKYQTIYTNAELRVRASAPDFSK 417

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
            P  + ++   G  V + C+   +P+  V+W    + +    R+ IL+ G L I +V+  
Sbjct: 418 NPLQKISIVQVGGNVTIECKPMASPRAMVSWKKGTEIIRQSKRFFILDDGSLNIYNVSKL 477

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A+N+ G A+ SG+L +KE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 478 DAGTYTCIAKNQFGIAKASGNLVIKERTIITVPPPQMDVTVGESIVLPCQVFHDPSVEVV 537

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W    + IDF+       R    +   L + +     SG+Y C  QT LD + A A +
Sbjct: 538 FTWSFNGQVIDFQRGVAHFERIGGESVGDLMIREIQLNHSGKYVCMVQTILDSLSAVADI 597

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD----GEGSI 452
            V+ P   P+N   I+ I +  + + W P    +     + Y +QT T          +I
Sbjct: 598 IVRGPPGPPNNLR-IENISSTTSQLCWGPGVDNN--SPIQIYTIQTRTPFSVGWLAVSTI 654

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE---------IISFVTPEGV 503
            E++   G+  T  V    P  +   RV+A N    G PS+          +  V P  +
Sbjct: 655 PEIL--SGKMHTATVVGLNPWVEYEFRVVAGNSIGIGEPSKPSKLLRTKAAVPIVAPTNI 712

Query: 504 PGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
            G   S        S   + W  +  E  NG   GY I ++      VG L+     ++ 
Sbjct: 713 SGGGGS-------RSELVITWESIPEELQNGEGFGYIIMFR-----PVGSLMWTKASVAS 760

Query: 562 PTTTS--AKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGST 614
             T+    +   L P + + + +  Y   G+G  S   + Y     P   P     +  +
Sbjct: 761 VETSKYVYRNESLTPLSPFEVKVGVYNNEGEGTLSPATVVYTGEDEPQLAPTGASVQSYS 820

Query: 615 PNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPY 674
            + + I+W A+                       AWN       R +  VL        Y
Sbjct: 821 SSEVDITWNAI-----------------------AWN-------RSTGRVLG-------Y 843

Query: 675 EIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 734
           E   V  WTE   E S  ++ V +G  TT  +      +  FA V A+N A +GP S  +
Sbjct: 844 E---VLYWTEDSKETSAGKIRV-RGNVTTKIITGLKANTIYFATVRAYNTAGSGPSSAPV 899

Query: 735 SFVT 738
           +  T
Sbjct: 900 NITT 903



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 176/699 (25%), Positives = 279/699 (39%), Gaps = 83/699 (11%)

Query: 39  TRKKEVALRNKKVELFC---IFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKH 93
           TR     L  + V LFC    + G       ++ +  P+  + R  ISQ     +L I  
Sbjct: 133 TRSTVSVLAGQGVVLFCGPPPYSGDVFYAWTYNDNPFPVQEASRRFISQAT--GNLYIAK 190

Query: 94  VEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAAEEETV 143
           VE SD G+YTC V+N   + +       ++           P   V  PE ++AA+  T+
Sbjct: 191 VEPSDVGNYTCIVTNMEAQKRVQGPPTPLVLRSDGVMGEYEPKIEVRFPEIMHAAKGSTI 250

Query: 144 TFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202
             EC A G P P+I W   +G P+++     + K     I I N ++ D G+Y C A N 
Sbjct: 251 KLECFALGNPVPDISWRKLDGSPLARKIQYSKSK---GMIAIPNFQEEDEGSYECIAGNL 307

Query: 203 LGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG 262
            G       +   A  PE  +  ++       +++  CR  G+P P   W+ N + +   
Sbjct: 308 RGRNIARGQLFFYA-LPEWDKKIQNTDLSLYDSLLWECRASGSPIPSYTWLKNGEPIVPE 366

Query: 263 RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQP--EDYEV 319
               +E G L IT +  +DSG Y C A NK  T   +  L V+      +  P  +   V
Sbjct: 367 DRIHIENGSLMITVLNLSDSGFYQCVAENKYQTIYTNAELRVRASAPDFSKNPLQKISIV 426

Query: 320 EAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQY 379
           + G + T  C  ++ P   +S  W +G+E I      RF   +D SL +   S+LD+G Y
Sbjct: 427 QVGGNVTIECKPMASPRAMVS--WKKGTEII--RQSKRFFILDDGSLNIYNVSKLDAGTY 482

Query: 380 TCRAQTELDFIEAQATLTV-----------QVPLEAPSNFTL-IQVID--AKKAVVSWN- 424
           TC A+ +    +A   L +           Q+ +    +  L  QV    + + V +W+ 
Sbjct: 483 TCIAKNQFGIAKASGNLVIKERTIITVPPPQMDVTVGESIVLPCQVFHDPSVEVVFTWSF 542

Query: 425 ---PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 481
               +  Q    HF     +   E  G+  IRE+ +N        V   + +    A ++
Sbjct: 543 NGQVIDFQRGVAHFE----RIGGESVGDLMIREIQLNHSGKYVCMVQTILDSLSAVADII 598

Query: 482 AFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY 541
                               G PG   +L    + S+   L W      N  +  Y I  
Sbjct: 599 V------------------RGPPGPPNNLRIENISSTTSQLCWGPGVDNNSPIQIYTI-- 638

Query: 542 QSVKGTKVGPL-LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK----- 595
           Q+     VG L +  +P I      +A + GL P  +Y   +      G G  SK     
Sbjct: 639 QTRTPFSVGWLAVSTIPEILSGKMHTATVVGLNPWVEYEFRVVAGNSIGIGEPSKPSKLL 698

Query: 596 -YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
                VP   P N+ G G + + LVI+W ++PE   N   F Y I +R   +   W +  
Sbjct: 699 RTKAAVPIVAPTNISGGGGSRSELVITWESIPEELQNGEGFGYIIMFRPVGS-LMWTKAS 757

Query: 655 VLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSI 691
           V     S+ V  N+      P+E+KV       +GEG++
Sbjct: 758 VASVETSKYVYRNESLTPLSPFEVKV--GVYNNEGEGTL 794



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 150/643 (23%), Positives = 248/643 (38%), Gaps = 91/643 (14%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G+P+P   W K+G PI P DRI   N   SL+I  +  SD G Y C     V E K
Sbjct: 344 CRASGSPIPSYTWLKNGEPIVPEDRIHIEN--GSLMITVLNLSDSGFYQC-----VAENK 396

Query: 115 SYSI----DLSVLA-APYFTVEP-EFINAAE-EETVTFECKASGLPEPEIHWVHNGKPIS 167
             +I    +L V A AP F+  P + I+  +    VT ECK    P   + W    + I 
Sbjct: 397 YQTIYTNAELRVRASAPDFSKNPLQKISIVQVGGNVTIECKPMASPRAMVSWKKGTEIIR 456

Query: 168 QAPPNPRR--KVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           Q+    +R   +    + I N+ K D G Y C A N  G + K     V+     IT  P
Sbjct: 457 QS----KRFFILDDGSLNIYNVSKLDAGTYTCIAKNQFG-IAKASGNLVIKERTIITVPP 511

Query: 226 KDEYTVDGKTVVLTCRVFGAPKPEV--NWIHNQK-----------ELTGGRYTILETGDL 272
                  G+++VL C+VF  P  EV   W  N +           E  GG       GDL
Sbjct: 512 PQMDVTVGESIVLPCQVFHDPSVEVVFTWSFNGQVIDFQRGVAHFERIGGE----SVGDL 567

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC--N 330
            I ++    SG+Y C  +  L +      + V+        P +  +E   S T +    
Sbjct: 568 MIREIQLNHSGKYVCMVQTILDSLSAVADIIVRGPP---GPPNNLRIENISSTTSQLCWG 624

Query: 331 AVSDPSLKLSIVWLRGSEP-----IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
              D +  + I  ++   P     +   + P  +    ++ TV   +     ++   A  
Sbjct: 625 PGVDNNSPIQIYTIQTRTPFSVGWLAVSTIPEILSGKMHTATVVGLNPWVEYEFRVVAGN 684

Query: 386 ELDFIEAQ-----ATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
            +   E             VP+ AP+N +        + V++W  +  +   G   GY +
Sbjct: 685 SIGIGEPSKPSKLLRTKAAVPIVAPTNISGGGG-SRSELVITWESIPEELQNGEGFGYII 743

Query: 441 QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN---GAYNGPPSEIISF 497
                      +  L+  K    + E  K+V  +++   +  F    G YN      +S 
Sbjct: 744 MF-------RPVGSLMWTKASVASVETSKYVYRNESLTPLSPFEVKVGVYNNEGEGTLSP 796

Query: 498 VT--------PEGVP--GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVK 545
            T        P+  P   +VQS  +  +  +   + W    +  G ++GY++ Y  +  K
Sbjct: 797 ATVVYTGEDEPQLAPTGASVQSYSSSEVDITWNAIAW---NRSTGRVLGYEVLYWTEDSK 853

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV----- 600
            T  G +  R         T+  + GL+ +T Y   +  Y  AG G  S  +        
Sbjct: 854 ETSAGKIRVR------GNVTTKIITGLKANTIYFATVRAYNTAGSGPSSAPVNITTKKSP 907

Query: 601 PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
           P + P N+  +  T + L ++W  +  +E+ +    Y+I +R+
Sbjct: 908 PSQAPSNIAWK-LTNSKLCLNWEHVKTMENESDVLGYKILYRQ 949



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 105/437 (24%), Positives = 159/437 (36%), Gaps = 89/437 (20%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ-GSY 102
           + + + ++ L C   G P+P   W ++G  I+ +        G SLII +   ++  G Y
Sbjct: 44  LGVEDSEIILNCAANGYPVPDYRWKQNGTDIDFTMSYHHRLVGGSLIISNPHIAEAIGIY 103

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPE----- 156
            C  +N +G   S    L       F T     ++    + V   C     P P      
Sbjct: 104 QCLATNPLGTIVSRKAKLQFAYIENFETKTRSTVSVLAGQGVVLFCG----PPPYSGDVF 159

Query: 157 IHWVHNGKP----------ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGY- 205
             W +N  P          ISQA  N         + I  +  SD GNY C  TN     
Sbjct: 160 YAWTYNDNPFPVQEASRRFISQATGN---------LYIAKVEPSDVGNYTCIVTNMEAQK 210

Query: 206 ---------------VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
                          V  +    +    PEI  A K      G T+ L C   G P P++
Sbjct: 211 RVQGPPTPLVLRSDGVMGEYEPKIEVRFPEIMHAAK------GSTIKLECFALGNPVPDI 264

Query: 251 NWIHNQKELTGG------RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTV 304
           +W    ++L G       +Y+    G + I +    D G Y C A N  G     G L  
Sbjct: 265 SW----RKLDGSPLARKIQYS-KSKGMIAIPNFQEEDEGSYECIAGNLRGRNIARGQLFF 319

Query: 305 KEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDY 364
                   + ++ ++    S  + C A   P    S  WL+  EPI  E     +   + 
Sbjct: 320 YALPEWDKKIQNTDLSLYDSLLWECRASGSP--IPSYTWLKNGEPIVPEDR---IHIENG 374

Query: 365 SLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV--------PLEAPSNFTLIQV--- 413
           SL +T  +  DSG Y C A+ +   I   A L V+         PL+     +++QV   
Sbjct: 375 SLMITVLNLSDSGFYQCVAENKYQTIYTNAELRVRASAPDFSKNPLQ---KISIVQVGGN 431

Query: 414 --IDAK-----KAVVSW 423
             I+ K     +A+VSW
Sbjct: 432 VTIECKPMASPRAMVSW 448



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 101/286 (35%), Gaps = 32/286 (11%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P FT EP+   +    E+  +   C A+G P P+  W  NG  I        R VG
Sbjct: 27  ILRGPNFTQEPQDLIYSLGVEDSEIILNCAANGYPVPDYRWKQNGTDIDFTMSYHHRLVG 86

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            + I          G Y C ATN LG +         A+        +   +V  G+ VV
Sbjct: 87  GSLIISNPHIAEAIGIYQCLATNPLGTIVSRKAKLQFAYIENFETKTRSTVSVLAGQGVV 146

Query: 238 LTCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        W +N           R+    TG+L I  V  +D G YTC 
Sbjct: 147 LFC----GPPPYSGDVFYAWTYNDNPFPVQEASRRFISQATGNLYIAKVEPSDVGNYTCI 202

Query: 289 ARNKLGT--AQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSL 337
             N       QG  +  V     +  +         PE      G +    C A+ +P  
Sbjct: 203 VTNMEAQKRVQGPPTPLVLRSDGVMGEYEPKIEVRFPEIMHAAKGSTIKLECFALGNPVP 262

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            +S   L GS       + ++ +S    + +    E D G Y C A
Sbjct: 263 DISWRKLDGSP---LARKIQYSKSKGM-IAIPNFQEEDEGSYECIA 304



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 15/198 (7%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P  AP+  + +Q   + +  ++WN ++     G   GY+V  WTE   E S  ++ V +G
Sbjct: 807 PQLAPTGAS-VQSYSSSEVDITWNAIAWNRSTGRVLGYEVLYWTEDSKETSAGKIRV-RG 864

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
             TT  +      +  FA V A+N A +GP S  ++  T +  P    S  A  L +S  
Sbjct: 865 NVTTKIITGLKANTIYFATVRAYNTAGSGPSSAPVNITTKKSPPSQAPSNIAWKLTNSKL 924

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STK 577
            L W  VK  +    ++GYKI Y+  + +K         +I +   TSA+L  L P    
Sbjct: 925 CLNWEHVKTMENESDVLGYKILYRQDRQSKT--------HILETNNTSAEL--LVPFEED 974

Query: 578 YRIHLAGYTKAGDGAESK 595
           Y I +   +  GDG+ S+
Sbjct: 975 YIIEIRTVSDGGDGSSSE 992


>gi|359078219|ref|XP_002697014.2| PREDICTED: contactin-4 [Bos taurus]
          Length = 1026

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 191/727 (26%), Positives = 294/727 (40%), Gaps = 112/727 (15%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P  IW + DG PI    R  + N    L I + +  D G Y C   N 
Sbjct: 243 VKLECFALGNPVPTIIWRRADGKPIATKARRHKSN--GILEIPNFQQEDAGLYECVAENS 300

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P ++ +   I+ A EE V +ECKA+G P+P   W+ NG+P+   
Sbjct: 301 RGKNVAKG-QLTFYAQPNWSQKINDIHVAIEENVFWECKANGRPKPTYRWLKNGEPLLT- 358

Query: 170 PPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
               R ++    G   ITI NL  SD G Y C A N  G ++    ++V+A  P+ +   
Sbjct: 359 ----RDRIHIEQGTLNITIVNL--SDAGMYQCVAENKHGVIFSSAELSVIAVGPDFSRTL 412

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADS 282
               T+   G  VV+ C+   +PKP   W   +  L    R TI E G L+I +V  +D+
Sbjct: 413 LKRVTLVKVGGEVVIECKPKASPKPVHTWKKGRDVLKENERITISEDGSLRIINVTKSDA 472

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   
Sbjct: 473 GSYTCIATNHFGTASSTGNLVVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLNIVFT 532

Query: 343 WLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           W      IDF+ +         Q +   L +       +G+Y C  QT +D + A A L 
Sbjct: 533 WSFNGRLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYICMVQTSVDRLSAAADLI 592

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGE 449
           V+ P   P   T+ ++ D   A +SW P     SP ++      Y +Q  T         
Sbjct: 593 VRGPPGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFSVGWQAV 645

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTP 500
            ++ ELI   G++ T  V    P  +   R +A N    G PS         E +  VTP
Sbjct: 646 NTVPELI--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTP 703

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
             V G   S        S   + W  V  E  NG   GY + ++       G ++  L  
Sbjct: 704 ANVSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFRP-----YGKMIWMLTV 751

Query: 559 I--SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGR 611
           +  +D +    +   + P + + + +  +   G+G  S           P K P ++  R
Sbjct: 752 LASADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFAR 811

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
             +  ++ + W +  E                                       N+   
Sbjct: 812 SLSATDIEVFWASPME--------------------------------------KNRGRI 833

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
           Q YE+K    W   D E + R+ I   G  T+T++     ++     V A+N A  GP S
Sbjct: 834 QGYEVKY---WRHDDKEENARK-IRTIGNQTSTKITNLKGSALYHLAVKAYNSAGTGPAS 889

Query: 732 EIISFVT 738
             ++  T
Sbjct: 890 ATVNVTT 896



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 162/638 (25%), Positives = 240/638 (37%), Gaps = 85/638 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V+ PE +  
Sbjct: 178 NLYIAKVEKSDVGNYTCVVTNTVTNQKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPT 237

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   +GKPI+      RR      + I N ++ D G Y 
Sbjct: 238 AKGTTVKLECFALGNPVPTIIWRRADGKPIAT---KARRHKSNGILEIPNFQQEDAGLYE 294

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P  ++   D +    + V   C+  G PKP   W+ N 
Sbjct: 295 CVAENSRGKNVAKGQLTFYAQ-PNWSQKINDIHVAIEENVFWECKANGRPKPTYRWLKNG 353

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           + L       +E G L IT V  +D+G Y C A NK G    S  L+V     I   P+ 
Sbjct: 354 EPLLTRDRIHIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSV-----IAVGPDF 408

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  K    W +G + +  E+E R   S D SL +
Sbjct: 409 SRTLLKRVTLVKVGGEVVIECKPKASP--KPVHTWKKGRDVLK-ENE-RITISEDGSLRI 464

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
              ++ D+G YTC A        +   L V+ P +     + + V   +  V+       
Sbjct: 465 INVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTKVMVPPSSMDVTVGESIVLPCQVTHD 524

Query: 429 QSLR----GHFRGYKVQTWTEKD------GEGSIRELIVNKGE---------STTTEVDK 469
            SL       F G  +    + D      G+ S  +L++   +            T VD+
Sbjct: 525 HSLNIVFTWSFNGRLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYICMVQTSVDR 584

Query: 470 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPE 528
              A+    R         GPP    +    E    T Q S    P   S   +  ++  
Sbjct: 585 LSAAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQAR 635

Query: 529 QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
            P      + + +Q+V           +P + D  T +A + GL P  +Y          
Sbjct: 636 TP------FSVGWQAVN---------TVPELIDGKTFTATVVGLNPWVEYEFRTVAANVI 680

Query: 589 GDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F Y + +R
Sbjct: 681 GIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFR 740

Query: 643 RHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
            +     W    +     S  V  N+    F P+E+KV
Sbjct: 741 PYGK-MIWMLTVLASADASRYVFRNESVRPFSPFEVKV 777



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 183/476 (38%), Gaps = 42/476 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  ++            SL+I +  +  D G Y C  +
Sbjct: 44  KKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDAGMYQCIAT 103

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLP----EPEIHWVHN 162
           N  G   S    L       F       ++  + + +   C   G P    E    W+ N
Sbjct: 104 NSFGTIVSREAKLQFAYLENFKPRTRSTVSVRQGQGMVLLC---GPPAHSGELSYAWIFN 160

Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN- 213
             P  Q   + RR V      + I  + KSD GNY C  TN+      LG     +  N 
Sbjct: 161 EYPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNQKVLGPPTPLILRND 217

Query: 214 --VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILET 269
             +  + P+I  + P+   T  G TV L C   G P P + W   + K +          
Sbjct: 218 GVMGEYEPKIEVQFPETVPTAKGTTVKLECFALGNPVPTIIWRRADGKPIATKARRHKSN 277

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I +    D+G Y C A N  G     G LT     + + +  D  V   ++  + C
Sbjct: 278 GILEIPNFQQEDAGLYECVAENSRGKNVAKGQLTFYAQPNWSQKINDIHVAIEENVFWEC 337

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   P  K +  WL+  EP+         Q    +L +T  +  D+G Y C A+ +   
Sbjct: 338 KANGRP--KPTYRWLKNGEPLLTRDRIHIEQG---TLNITIVNLSDAGMYQCVAENKHGV 392

Query: 390 IEAQATLTVQVPLEAPSNFTLIQVIDAKK----AVVSWNP-VSPQSLRGHFRGYKVQTWT 444
           I + A L+V + +    + TL++ +   K     V+   P  SP+ +    +G  V    
Sbjct: 393 IFSSAELSV-IAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVHTWKKGRDVLKEN 451

Query: 445 EK---DGEGSIRELIVNK---GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
           E+     +GS+R + V K   G  T    + F  AS     V+        PPS +
Sbjct: 452 ERITISEDGSLRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTKVMVPPSSM 507



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 117/302 (38%), Gaps = 32/302 (10%)

Query: 119 DLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D   L  P F  EP    F   +EE+ V   C+  G P+P I W  NG  +     + R 
Sbjct: 19  DDYTLHGPIFIQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIG-MDFRY 77

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            V    + I N  K+ D G Y C ATNS G +         A+        +   +V  G
Sbjct: 78  SVVEGSLLINNPNKTQDAGMYQCIATNSFGTIVSREAKLQFAYLENFKPRTRSTVSVRQG 137

Query: 234 KTVVLTCRVFGAP----KPEVNWIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYTC 287
           + +VL C   G P    +    WI N+        R+   ETG+L I  V  +D G YTC
Sbjct: 138 QGMVLLC---GPPAHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTC 194

Query: 288 FARNKLGTAQ-----------GSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              N +   +             G +   E       PE      G +    C A+ +P 
Sbjct: 195 VVTNTVTNQKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTAKGTTVKLECFALGNPV 254

Query: 337 LKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
              +I+W R   +PI   ++ R  +SN   L +    + D+G Y C A+       A+  
Sbjct: 255 --PTIIWRRADGKPI--ATKARRHKSNGI-LEIPNFQQEDAGLYECVAENSRGKNVAKGQ 309

Query: 396 LT 397
           LT
Sbjct: 310 LT 311



 Score = 42.4 bits (98), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 23/191 (12%)

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            RG  +GY+V+ W   D E + R+ I   G  T+T++     ++     V A+N A  GP 
Sbjct: 830  RGRIQGYEVKYWRHDDKEENARK-IRTIGNQTSTKITNLKGSALYHLAVKAYNSAGTGPA 888

Query: 492  SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
            S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 889  SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWSR 944

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
             +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P    
Sbjct: 945  QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIP--KI 992

Query: 606  DNVEGRGSTPN 616
             N   RG+ P+
Sbjct: 993  SNAYARGAGPS 1003


>gi|291394024|ref|XP_002713237.1| PREDICTED: contactin-3-like [Oryctolagus cuniculus]
          Length = 1079

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 172/632 (27%), Positives = 272/632 (43%), Gaps = 50/632 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P   S +I    +   L I + +  D GSY 
Sbjct: 240 AAKGSTVKLECFALGNPVPQINWRRSDGLPF--SSKIKLRKFNGVLEIPNFQQEDTGSYE 297

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++      +  A E+ + +EC+ASG P+P   W+ NG
Sbjct: 298 CIAENSRGKNVARG-RLTYYAKPHWVQLIRDVEIAVEDNLHWECRASGKPKPSYRWLKNG 356

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + +       R ++    +TI NL  +D+G + C A N  G VY    + V+A AP+ ++
Sbjct: 357 EALVL---EERIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSK 413

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTIL-ETGDLKITDVAF 279
            P  +      G  V L C+   +P+   +W      +    RY +L E G LKIT+V  
Sbjct: 414 NPMKKLVQVQVGSVVNLDCKPRASPRALSSWKRGDTMVQEHDRYWVLPEDGRLKITNVTK 473

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           AD+G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L +
Sbjct: 474 ADTGMYTCTAENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDI 533

Query: 340 SIVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
              W       DF+ +    +    S+   L +       SG+Y C  QT +D + + A 
Sbjct: 534 MFTWYFNGVLTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAAD 593

Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTE 445
           L V+     P N  ++++ D   A +SW       +P+   S++       G++  T   
Sbjct: 594 LIVRGSPGPPENVKVVEITDT-TAQLSWEEGTDNHSPIITYSIQARTPFSVGWQAVT--- 649

Query: 446 KDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVP 504
                ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP
Sbjct: 650 -----TVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVP 702

Query: 505 GTVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
               S  +   GS S   + W  V  E  NG   GY + ++ +    V   ++ +    D
Sbjct: 703 EVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPL---GVTTWIQTVVTSPD 759

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES--KYLFYV---PFKNPDNVEGRGSTPN 616
                 +   + P + Y + +  Y   G+G  S    +F     P   P  V     + +
Sbjct: 760 TPRYVFRNESIVPFSPYEVKVGVYNNRGEGPFSPVATVFSAEEEPTVAPSQVSANSLSSS 819

Query: 617 NLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
            + +SW  +P    N     Y +  R  N GE
Sbjct: 820 EIEVSWNTVPWKLSNGHLLGYEV--RYWNNGE 849



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 163/625 (26%), Positives = 245/625 (39%), Gaps = 61/625 (9%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV----------EP------ 132
           L I  VE SD G+YTC V++ V  A+       VL +P   V          EP      
Sbjct: 182 LYIAKVEPSDVGNYTCVVTSTVTNAR-------VLGSPTPLVLRSDGVMGEYEPKIEVQF 234

Query: 133 -EFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKS 190
            E + AA+  TV  EC A G P P+I+W   +G P S      + +     + I N ++ 
Sbjct: 235 SETLPAAKGSTVKLECFALGNPVPQINWRRSDGLPFSS---KIKLRKFNGVLEIPNFQQE 291

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKP 248
           DTG+Y C A NS G   K+V    L +   P   +  +D        +   CR  G PKP
Sbjct: 292 DTGSYECIAENSRG---KNVARGRLTYYAKPHWVQLIRDVEIAVEDNLHWECRASGKPKP 348

Query: 249 EVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEH 307
              W+ N + L       +E G L I+++   DSG + C A NK G    S  L  V   
Sbjct: 349 SYRWLKNGEALVLEERIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVVASA 408

Query: 308 THITDQPED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
              +  P     +V+ G      C   + P    S  W RG   +  E +  +V   D  
Sbjct: 409 PDFSKNPMKKLVQVQVGSVVNLDCKPRASPRALSS--WKRGDTMVQ-EHDRYWVLPEDGR 465

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVS 422
           L +T  ++ D+G YTC A+ +         L V  P     APSN   + V   +  ++ 
Sbjct: 466 LKITNVTKADTGMYTCTAENQFGKANGTTHLVVTEPTRITLAPSN---MDVSVGESVILP 522

Query: 423 WNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLA 482
                   L   F  Y     T+   +GS  E +   G S+   + + +    +   V  
Sbjct: 523 CQVQHDPLLDIMFTWYFNGVLTDFKKDGSHFEKV--GGSSSGDLMIRNIQLKHSGKYVCM 580

Query: 483 FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
                +   S     V   G PG  ++++ + +  +   L W +    +  ++ Y I  Q
Sbjct: 581 VQTGVDSVSSAADLIV--RGSPGPPENVKVVEITDTTAQLSWEEGTDNHSPIITYSI--Q 636

Query: 543 SVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------K 595
           +     VG   +  +P + D  T +A +  L P  +Y   +    K G G  S      +
Sbjct: 637 ARTPFSVGWQAVTTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVR 696

Query: 596 YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDV 655
               VP   P  V G G + + LVI+W  +PE   N   F Y + +R       W Q  V
Sbjct: 697 TEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGV-TTWIQTVV 755

Query: 656 LDWRQSELVLANQPT--FQPYEIKV 678
                   V  N+    F PYE+KV
Sbjct: 756 TSPDTPRYVFRNESIVPFSPYEVKV 780



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 170/711 (23%), Positives = 280/711 (39%), Gaps = 94/711 (13%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    + R  E+A+ +  +   C   G P P   W K+G  +   +RI   N   +L I 
Sbjct: 319 PHWVQLIRDVEIAVEDN-LHWECRASGKPKPSYRWLKNGEALVLEERIQIEN--GALTIS 375

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKA 149
           ++  +D G + C   N  G   S S +L V+A AP F+  P  + +       V  +CK 
Sbjct: 376 NLNVTDSGMFQCIAENKHGLVYS-SAELKVVASAPDFSKNPMKKLVQVQVGSVVNLDCKP 434

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGP--NRITIENLRKSDTGNYGCNATNSLGYVY 207
              P     W      + +   + R  V P   R+ I N+ K+DTG Y C A N  G   
Sbjct: 435 RASPRALSSWKRGDTMVQE---HDRYWVLPEDGRLKITNVTKADTGMYTCTAENQFGKAN 491

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV--NWIHN---------- 255
              ++ V+     IT AP +     G++V+L C+V   P  ++   W  N          
Sbjct: 492 GTTHL-VVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGVLTDFKKDG 550

Query: 256 -QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK--------- 305
              E  GG      +GDL I ++    SG+Y C  +  + +   +  L V+         
Sbjct: 551 SHFEKVGGS----SSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENV 606

Query: 306 EHTHITDQPEDYEVEAGQS-----ATFRCNAVSDPSLKLSIVWLRGSEPIDFESE-PRFV 359
           +   ITD       E G        T+   A +  S+    V     E ID ++     V
Sbjct: 607 KVVEITDTTAQLSWEEGTDNHSPIITYSIQARTPFSVGWQAV-TTVPEVIDGKTHTATVV 665

Query: 360 QSN---DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDA 416
           + N   +Y   V  S+++  G+ +         + ++   T +   E P +         
Sbjct: 666 ELNPWVEYEFRVVASNKIGGGEPS---------LPSEKVRTEEAVPEVPPSEVSGGGGSR 716

Query: 417 KKAVVSWNPVSPQSLRGH-------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDK 469
            + V++W+PV  +   G        FR   V TW +           V + ES       
Sbjct: 717 SELVITWDPVPEELQNGEGFGYVVAFRPLGVTTWIQTVVTSPDTPRYVFRNES------- 769

Query: 470 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VK 526
            VP S    +V  +N    GP S + +  + E  P    S + A  L SS   + W  V 
Sbjct: 770 IVPFSPYEVKVGVYNNRGEGPFSPVATVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTVP 829

Query: 527 PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYT 586
            +  NG L+GY+++Y +    +   L  ++    +   TSA+L GL+ +  Y   +  Y 
Sbjct: 830 WKLSNGHLLGYEVRYWN--NGEEEDLSSKVKVAGN--ETSARLRGLKSNLAYYTAVRAYN 885

Query: 587 KAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            AG G  S  +        P + P NV    +T   ++++W  +  +E+ +    Y++F+
Sbjct: 886 SAGAGPFSTTVNATTKKTPPSQPPGNVVWN-ATDTKVLLNWEQVKAMENESEVTGYKVFY 944

Query: 642 RRHNTGEAWNQDDVLDWRQS--ELVLANQPTFQPYEIKVVQTWTEKDGEGS 690
           R  +     N   VL   ++  EL+L   P  + Y I+V  T    DG  S
Sbjct: 945 RTSSQ----NNMQVLSTNKTSAELLL---PIKEDYIIEVKATTDGGDGTSS 988



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 145/370 (39%), Gaps = 28/370 (7%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           +KK+ L C   G P P   W  +G  I+ S +   + N G  ++I      D GSY C  
Sbjct: 44  DKKITLTCEARGNPSPHYRWQLNGSDIDMSMEHRYKLNGGNLVVINPNRNWDTGSYQCFA 103

Query: 107 SNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVH 161
           +N +G   S    L       F T     ++  E + V   C   G P    E    W+ 
Sbjct: 104 TNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLC---GPPPHSGELSYAWIF 160

Query: 162 NGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDVYVNVLAH 217
           N  P S    + RR V      + I  +  SD GNY C  T+++    V       VL  
Sbjct: 161 NEYP-SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNARVLGSPTPLVLRS 219

Query: 218 APEITE-APKDEY-------TVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE- 268
              + E  PK E           G TV L C   G P P++NW  +       +  + + 
Sbjct: 220 DGVMGEYEPKIEVQFSETLPAAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKLRKF 279

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
            G L+I +    D+G Y C A N  G     G LT     H      D E+    +  + 
Sbjct: 280 NGVLEIPNFQQEDTGSYECIAENSRGKNVARGRLTYYAKPHWVQLIRDVEIAVEDNLHWE 339

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A   P  K S  WL+  E +  E     +Q  + +LT++  +  DSG + C A+ +  
Sbjct: 340 CRASGKP--KPSYRWLKNGEALVLEER---IQIENGALTISNLNVTDSGMFQCIAENKHG 394

Query: 389 FIEAQATLTV 398
            + + A L V
Sbjct: 395 LVYSSAELKV 404



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 126/300 (42%), Gaps = 32/300 (10%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +E++ +T  C+A G P P   W  NG  I  +  +  +  G
Sbjct: 23  LLQGPVFIKEPSNSIFPVDSEDKKITLTCEARGNPSPHYRWQLNGSDIDMSMEHRYKLNG 82

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N + I   R  DTG+Y C ATNSLG +         A+        +   +V +G+ VV
Sbjct: 83  GNLVVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVV 142

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        WI N+     E    R+   ETG L I  V  +D G YTC 
Sbjct: 143 LLC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCV 198

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQPEDYEVE--------AGQSATFRCNAVSDPSL 337
             + +  A+  GS   L ++    + +     EV+         G +    C A+ +P  
Sbjct: 199 VTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFSETLPAAKGSTVKLECFALGNPVP 258

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +++  W R S+ + F S+ +  + N   L +    + D+G Y C A+       A+  LT
Sbjct: 259 QIN--WRR-SDGLPFSSKIKLRKFNGV-LEIPNFQQEDTGSYECIAENSRGKNVARGRLT 314



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 132/610 (21%), Positives = 217/610 (35%), Gaps = 78/610 (12%)

Query: 51   VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            V L C    +P   + W +    +   DR         L I +V  +D G YTC   N  
Sbjct: 428  VNLDCKPRASPRALSSWKRGDTMVQEHDRYWVLPEDGRLKITNVTKADTGMYTCTAENQF 487

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--WVHNGKPIS- 167
            G+A   +  L V      T+ P  ++ +  E+V   C+    P  +I   W  NG     
Sbjct: 488  GKANG-TTHLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGVLTDF 546

Query: 168  QAPPNPRRKVGPNR---ITIENLRKSDTGNYGCNATNSLGYVYK--DVYVNVLAHAPE-- 220
            +   +   KVG +    + I N++   +G Y C     +  V    D+ V      PE  
Sbjct: 547  KKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENV 606

Query: 221  ----ITEAPKD---EYTVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGD 271
                IT+       E   D  + ++T  +       V W  +    E+  G+     T  
Sbjct: 607  KVVEITDTTAQLSWEEGTDNHSPIITYSIQARTPFSVGWQAVTTVPEVIDGK-----THT 661

Query: 272  LKITDVAFADSGEYTCFARNKLGT---------------------AQGSGSLTVKEHTHI 310
              + ++      E+   A NK+G                      ++ SG    +    I
Sbjct: 662  ATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVI 721

Query: 311  TDQPEDYEVEAGQS----ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
            T  P   E++ G+       FR   V+         W++    +     PR+V  N+ S+
Sbjct: 722  TWDPVPEELQNGEGFGYVVAFRPLGVT--------TWIQTV--VTSPDTPRYVFRNE-SI 770

Query: 367  TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPV 426
                  E+  G Y  R +     + A      + P  APS  +    + + +  VSWN V
Sbjct: 771  VPFSPYEVKVGVYNNRGEGPFSPV-ATVFSAEEEPTVAPSQVSA-NSLSSSEIEVSWNTV 828

Query: 427  SPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
              +   GH  GY+V+ W   + E    ++ V  G  T+  +         +  V A+N A
Sbjct: 829  PWKLSNGHLLGYEVRYWNNGEEEDLSSKVKV-AGNETSARLRGLKSNLAYYTAVRAYNSA 887

Query: 487  YNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSV 544
              GP S  ++  T +  P             +   L W  VK  +    + GYK+ Y++ 
Sbjct: 888  GAGPFSTTVNATTKKTPPSQPPGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTS 947

Query: 545  KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKN 604
                +  L            TSA+L  L     Y I +   T  GDG  S+    +    
Sbjct: 948  SQNNMQVL--------STNKTSAELL-LPIKEDYIIEVKATTDGGDGTSSE---QIRIPR 995

Query: 605  PDNVEGRGST 614
              +++ RGST
Sbjct: 996  ITSMDARGST 1005


>gi|301760363|ref|XP_002915992.1| PREDICTED: contactin-4-like [Ailuropoda melanoleuca]
          Length = 1110

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 192/726 (26%), Positives = 292/726 (40%), Gaps = 111/726 (15%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V L C   G P+P  IW + DG PI    R  + N    L I + +  D G Y C   N 
Sbjct: 328 VRLECFALGNPVPTIIWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGLYECVAENS 385

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P +  +   I+ A EE V +ECKA+G P+P   W+ NG+P+   
Sbjct: 386 RGKNVARG-QLTFYAQPNWIQKINDIHVAIEENVFWECKANGRPKPTYRWLKNGEPLLT- 443

Query: 170 PPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
               R ++    G   ITI NL  SD G Y C A N  G ++    ++V+A  P+ +   
Sbjct: 444 ----RDRIQIEQGTLNITIVNL--SDAGMYQCVAENKHGVIFSSAELSVIAVGPDFSRTL 497

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADS 282
               T+   G  VV+ C+   +PKP   W   +  L    R TI E G LKI +V  +D+
Sbjct: 498 LKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDILRENERITISEDGSLKIVNVTKSDA 557

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   
Sbjct: 558 GSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFT 617

Query: 343 WLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           W      IDF+ +     R    +   L +       +G+Y C  QT +D + A A L V
Sbjct: 618 WSFNGHLIDFDKDGDHFERVGGDSAGDLMIRNIQLKHAGKYICMVQTSVDKLSAGADLIV 677

Query: 399 QVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGEG 450
           + P   P   T+ ++ D   A +SW P     SP ++      Y +Q  T          
Sbjct: 678 RGPPGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFSVGWQAVN 730

Query: 451 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTPE 501
           ++ ELI   G++ T  V    P  +   R +A N    G PS         E +  VTP 
Sbjct: 731 TVPELI--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPA 788

Query: 502 GVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
            V G   S        S   + W  V  E  NG   GY + ++       G ++  L  +
Sbjct: 789 NVSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFRP-----YGKMIWMLTVL 836

Query: 560 --SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRG 612
             +D +    +   + P + + + +  +   G+G  S           P K P ++  R 
Sbjct: 837 ASADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARS 896

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
            +  ++ + W +  E                                       N+   Q
Sbjct: 897 LSATDIEVFWASPME--------------------------------------KNRGRIQ 918

Query: 673 PYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 732
            YE+K    W   D E + R+ I   G  T+T++     ++     V A+N A  GP S 
Sbjct: 919 GYEVKY---WRHDDKEENARK-IRTIGNQTSTKITNLKGSALYHLAVKAYNTAGTGPSSA 974

Query: 733 IISFVT 738
            ++  T
Sbjct: 975 TVNVTT 980



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 165/637 (25%), Positives = 239/637 (37%), Gaps = 84/637 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V  PE +  
Sbjct: 263 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVHFPEMVPT 322

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   +GKPI++     RR      + I N ++ D G Y 
Sbjct: 323 AKGTTVRLECFALGNPVPTIIWRRADGKPIAR---KARRHKSNGILEIPNFQQEDAGLYE 379

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P   +   D +    + V   C+  G PKP   W+ N 
Sbjct: 380 CVAENSRGKNVARGQLTFYAQ-PNWIQKINDIHVAIEENVFWECKANGRPKPTYRWLKNG 438

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           + L       +E G L IT V  +D+G Y C A NK G    S  L+V     I   P+ 
Sbjct: 439 EPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSV-----IAVGPDF 493

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  K    W +G + I  E+E R   S D SL +
Sbjct: 494 SRTLLKRVTLVKVGGEVVIECKPKASP--KPVYTWKKGRD-ILRENE-RITISEDGSLKI 549

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV------- 421
              ++ D+G YTC A        +   L V+ P       + + V   +  V+       
Sbjct: 550 VNVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHD 609

Query: 422 -SWNPVSPQSLRGHFRGY-KVQTWTEKDGEGSIRELIVNKGE---------STTTEVDKF 470
            S + V   S  GH   + K     E+ G  S  +L++   +            T VDK 
Sbjct: 610 HSLDIVFTWSFNGHLIDFDKDGDHFERVGGDSAGDLMIRNIQLKHAGKYICMVQTSVDKL 669

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPEQ 529
              +    R         GPP    +    E    T Q S    P   S   +  ++   
Sbjct: 670 SAGADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQART 720

Query: 530 PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           P      + + +Q+V           +P + D  T +A + GL P  +Y          G
Sbjct: 721 P------FSVGWQAVN---------TVPELIDGKTFTATVVGLNPWVEYEFRTVAANVIG 765

Query: 590 DGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  S      +    +P   P NV G G + + LVI+W  +PE   N   F Y + +R 
Sbjct: 766 IGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRP 825

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
           +     W    +     S  V  N+    F P+E+KV
Sbjct: 826 YGK-MIWMLTVLASADASRYVFRNESVRPFSPFEVKV 861



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 140/374 (37%), Gaps = 40/374 (10%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  ++            SL+I +  +  D G+Y C  +
Sbjct: 129 KKVKLNCEVKGNPKPHIRWKLNGTDVDIGVDFRYSVVEGSLLINNPNKTQDAGTYQCIAT 188

Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFEC---KASGLPEPEIHWVHNG 163
           N  G   S    L       F T     ++  + + +   C     SG  E    W+ N 
Sbjct: 189 NSFGTVVSREAKLQFAYLENFKTRTRSTVSVRQGQGMVLLCGPPAHSG--ELSYAWIFNE 246

Query: 164 KPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY---------------- 205
            P  Q   + RR V      + I  + KSD GNY C  TN++                  
Sbjct: 247 YPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDG 303

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRY 264
           V  +    +  H PE+        T  G TV L C   G P P + W   + K +     
Sbjct: 304 VMGEYEPKIEVHFPEMVP------TAKGTTVRLECFALGNPVPTIIWRRADGKPIARKAR 357

Query: 265 TILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
                G L+I +    D+G Y C A N  G     G LT     +   +  D  V   ++
Sbjct: 358 RHKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAIEEN 417

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             + C A   P  K +  WL+  EP+        +Q    +L +T  +  D+G Y C A+
Sbjct: 418 VFWECKANGRP--KPTYRWLKNGEPLLTRDR---IQIEQGTLNITIVNLSDAGMYQCVAE 472

Query: 385 TELDFIEAQATLTV 398
            +   I + A L+V
Sbjct: 473 NKHGVIFSSAELSV 486



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 117/302 (38%), Gaps = 32/302 (10%)

Query: 119 DLSVLAAPYFTVEPEFIN---AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D   L  P F  EP  +     +EE+ V   C+  G P+P I W  NG  +     + R 
Sbjct: 104 DDYTLHGPVFIQEPSHVMFPLNSEEKKVKLNCEVKGNPKPHIRWKLNGTDVDIG-VDFRY 162

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            V    + I N  K+ D G Y C ATNS G V         A+        +   +V  G
Sbjct: 163 SVVEGSLLINNPNKTQDAGTYQCIATNSFGTVVSREAKLQFAYLENFKTRTRSTVSVRQG 222

Query: 234 KTVVLTCRVFGAP----KPEVNWIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYTC 287
           + +VL C   G P    +    WI N+        R+   ETG+L I  V  +D G YTC
Sbjct: 223 QGMVLLC---GPPAHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTC 279

Query: 288 FARNK------LG-----TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              N       LG       +  G +   E       PE      G +    C A+ +P 
Sbjct: 280 VVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVHFPEMVPTAKGTTVRLECFALGNPV 339

Query: 337 LKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
              +I+W R   +PI    + R  +SN   L +    + D+G Y C A+       A+  
Sbjct: 340 --PTIIWRRADGKPI--ARKARRHKSNGI-LEIPNFQQEDAGLYECVAENSRGKNVARGQ 394

Query: 396 LT 397
           LT
Sbjct: 395 LT 396



 Score = 42.4 bits (98), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 81/191 (42%), Gaps = 23/191 (12%)

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            RG  +GY+V+ W   D E + R+ I   G  T+T++     ++     V A+N A  GP 
Sbjct: 914  RGRIQGYEVKYWRHDDKEENARK-IRTIGNQTSTKITNLKGSALYHLAVKAYNTAGTGPS 972

Query: 492  SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
            S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  K
Sbjct: 973  SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNK 1028

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
             +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P    
Sbjct: 1029 QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIP--KI 1076

Query: 606  DNVEGRGSTPN 616
             N   RG+ P+
Sbjct: 1077 SNAYARGAGPS 1087


>gi|156717286|ref|NP_001096185.1| neural cell adhesion molecule L1 precursor [Xenopus (Silurana)
           tropicalis]
 gi|134025431|gb|AAI35443.1| l1cam protein [Xenopus (Silurana) tropicalis]
          Length = 1250

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 188/391 (48%), Gaps = 17/391 (4%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS---DRISQGNYGKSLIIKHVEFSDQG 100
           +ALR++ ++L CI  G P P+  W    +P+  S   +RI   ++ K+L I  V+  D G
Sbjct: 255 LALRDQPLQLECIAEGLPTPEIEW----IPLLGSTYNERIQFDDFKKTLHIDKVQDEDDG 310

Query: 101 SYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV 160
            Y C   N  G + S++  + V +APY+  +PE    A  E +   C+  G P+P++ W 
Sbjct: 311 DYQCIAKNTQG-SSSHTFTVVVESAPYWINKPEDGIYAPGEDIILHCEVGGKPKPKVTWK 369

Query: 161 HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
            NGK +  +      K+    + + N++ +DT    C A N  G +  + +V V+   P+
Sbjct: 370 INGKSLKDSDLYHNWKLIDGSLVLNNMQLNDTSVVQCEARNKHGNLLANAFVYVVELPPQ 429

Query: 221 ITEAPKDEYTVDGKT-VVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDV 277
           I     ++Y V  KT V + CR FG P P + W  + ++      ++++   G L IT V
Sbjct: 430 ILTRNDEQYIVVEKTNVSMDCRAFGTPFPTIQWESDLEDNLFALDQFSMHTNGTLTITGV 489

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
           A  D G Y C A N  G    S  L V+  T I   P +     G  A F+C    DP +
Sbjct: 490 AKEDEGIYRCTASNNQGNVSISAYLDVRNATKIITPPMEQHARKGGKAIFQCKVEFDPKM 549

Query: 338 KLSIV-WLRGSEPI--DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
              I+ W +    I  D +++  F++  DY+L+++   E D G YTC A TELD +E  A
Sbjct: 550 SDKIIQWRKNGNEIKEDADNDKYFIE--DYTLSISNVQESDHGMYTCAAHTELDAVELTA 607

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            L V    EAP +  L    +     ++W P
Sbjct: 608 ELVVIDLPEAPFDLELSNAQET-SITLTWTP 637



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 79/190 (41%), Gaps = 3/190 (1%)

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
           +P   P N  L + ++     V+W PV    L GH +G+ V  +T  +G       ++  
Sbjct: 810 MPDITPENVGL-EAMNESAIKVAWLPVQKNGLNGHLKGFMVY-YTRHNGHNRHPGKLLVH 867

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
           G +T   +    P S     V   NG   G  SE     T EGVP     L       ++
Sbjct: 868 GNTTHALITGLKPYSNYSVEVAIINGKGEGEHSESRMIRTDEGVPSPPSFLRLERQSDTS 927

Query: 520 FYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYR 579
             L W  PE PNG+L GY+I +Q V  T  G        I+DPT  +  L+ +     YR
Sbjct: 928 LTLIWGPPETPNGILTGYEIYHQIVNKTHTGAKYFS-ETINDPTQQNWTLSNISSKDTYR 986

Query: 580 IHLAGYTKAG 589
            +L   T  G
Sbjct: 987 FYLYATTSVG 996



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 81/328 (24%), Positives = 133/328 (40%), Gaps = 36/328 (10%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSD--RISQGNYGKSLIIKHVEFSD 98
           +K V   N  + L C        +  W KDG    P +  R+S+     +L I     S 
Sbjct: 48  EKYVLYPNDDIVLKCEAKRNAKAKYTWKKDGETFQPDNDPRVSRKKDSGTLNISGNGNSM 107

Query: 99  ---QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK--ASGL 152
              QG Y C  +N +G A S+ I +   + P +  E    ++  E  ++   C    S +
Sbjct: 108 KDFQGKYRCYATNDLGTAISHEIHVITESTPKWQKELIRPLDIEEGASLILPCNPPKSAV 167

Query: 153 PEPEIHWVH-NGKPISQAPPNPRRKVGPN-RITIENLRKSDTG-NYGCNA--TNSLGYVY 207
           P P + W++ N   I+Q   + R  +G N  +   N++K D   +Y C+A    +   V 
Sbjct: 168 P-PRVIWMNSNLLHITQ---DERVSMGVNGNLYFSNVQKQDEHPDYICHAQFVGARTIVQ 223

Query: 208 KDVYV-------NVLAHAPEITEAPKDEYTV---DGKTVVLTCRVFGAPKPEVNWIHNQK 257
           K+          +V    PE+        TV     + + L C   G P PE+ WI    
Sbjct: 224 KEAISIKVRPTNSVKFRKPEMMLPEGSMSTVLALRDQPLQLECIAEGLPTPEIEWI---- 279

Query: 258 ELTGGRYT-ILETGDLK----ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD 312
            L G  Y   ++  D K    I  V   D G+Y C A+N  G++  + ++ V+   +  +
Sbjct: 280 PLLGSTYNERIQFDDFKKTLHIDKVQDEDDGDYQCIAKNTQGSSSHTFTVVVESAPYWIN 339

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           +PED     G+     C     P  K++
Sbjct: 340 KPEDGIYAPGEDIILHCEVGGKPKPKVT 367


>gi|281337428|gb|EFB13012.1| hypothetical protein PANDA_013904 [Ailuropoda melanoleuca]
          Length = 967

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 189/729 (25%), Positives = 299/729 (41%), Gaps = 92/729 (12%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 210 PADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 267

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G+Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 268 NIQLEDEGTYECEAENNRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 323

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 324 TGKPIPTIRWLKNGYAYHKG------ELRLYDVTFEN-----AGMYQCIAENTHGAIYAN 372

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 373 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 432

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 433 WEDGSLEINNITRNDGGIYTCFAENNRGRANNTGTLVITDPTRIILAPINADITVGENAT 492

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ +W      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 493 MQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 552

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            AQT +D   A A L V+ P   P     I+ I A    +SW+  S          Y +Q
Sbjct: 553 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALSWSRGSDN--HSPISKYTIQ 609

Query: 442 TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           T T    D + +  +  + +G          +P  +   RV+A N    G PS   + + 
Sbjct: 610 TKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIK 669

Query: 500 PEGVPGTVQSLEAIPLGSS--AFYLKWV--KPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
            +G    V   +    G S     + WV    E   G   GY + ++   G +   +   
Sbjct: 670 TDGAAPNVAPSDVGGGGGSNRELTITWVPLSREYHYGNNFGYIVAFKPFDGEEWKKVT-- 727

Query: 556 LPYISDPTTTS--AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS 613
              +++P T     K   + PST +++ +  +   GDG         P+           
Sbjct: 728 ---VTNPDTGRYVHKDETMRPSTAFQVKVKAFNNKGDG---------PY----------- 764

Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVL----ANQP 669
                  S TA+     +AP              EA  +  V     SE+ +      + 
Sbjct: 765 -------SLTAVINSAQDAP-------------SEAPTEVGVKVLSSSEISVHWEHVVEK 804

Query: 670 TFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGP 729
             + Y+I+    W   D E +   + V   E  +  ++  +P ++ F  V A N A  GP
Sbjct: 805 IVESYQIRY---WAAHDKEAAAHRVQVTSQE-YSARLENLLPDTQYFVEVRACNSAGCGP 860

Query: 730 PSEIISFVT 738
           PS++I   T
Sbjct: 861 PSDMIEIFT 869



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 155/657 (23%), Positives = 247/657 (37%), Gaps = 85/657 (12%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 158 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTKPYPADIVV 215

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  I A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 216 QFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 272

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N+ G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 273 DEGTYECEAENNRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 331

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 332 RWLKN-----GYAY---HKGELRLYDVTFENAGMYQCIAENTHGAIYANAELKILALAPT 383

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   D SL 
Sbjct: 384 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 439

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC A+          TL +  P   + AP N  +    +A  +   S+
Sbjct: 440 INNITRNDGGIYTCFAENNRGRANNTGTLVITDPTRIILAPINADITVGENATMQCAASF 499

Query: 424 NPVSPQSLRGHFRGYKVQTWTEK-----------DGEGSIRELIVNKGESTTTEVDKFVP 472
           +P    +    F GY +    E            +GE  IR   +      T      V 
Sbjct: 500 DPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVD 559

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
            S   A ++                    G PG    L    + +++  L W +    + 
Sbjct: 560 NSSASADLVV------------------RGPPGPPGGLRIEDIRATSVALSWSRGSDNHS 601

Query: 533 VLMGYKIKYQSV-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
            +  Y I+ +++     K  K  P       I +    +A+   L P  +Y   +     
Sbjct: 602 PISKYTIQTKTILSDDWKDAKTDPP------IIEGNMEAARAVDLIPWMEYEFRVVATNT 655

Query: 588 AGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            G G  S      K     P   P +V G G +   L I+W  +    H   +F Y + +
Sbjct: 656 LGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWVPLSREYHYGNNFGYIVAF 715

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
           +  + GE W +  V +      V  ++ T +P   +++KV     + DG  S+  +I
Sbjct: 716 KPFD-GEEWKKVTVTNPDTGRYVHKDE-TMRPSTAFQVKVKAFNNKGDGPYSLTAVI 770



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 140/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   I+  SDR S    G +L+I + +   D G Y C  S
Sbjct: 29  KVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 86

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 87  NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 140

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 141 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 197

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 198 LIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 257

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 258 STSGAVLKIFNIQLEDEGTYECEAENNRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 317

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+       + E R      Y +T       ++G Y C A+ 
Sbjct: 318 YWPCVATGKPI--PTIRWLKNGYAY-HKGELRL-----YDVTFE-----NAGMYQCIAEN 364

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 365 THGAIYANAELKI 377



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   I     +    VG N +   
Sbjct: 16  PINTIYPE---ESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTS-DRYSMVGGNLVINN 71

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   +
Sbjct: 72  PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 131

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 132 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 191

Query: 299 SGSL---------TVKEH-THITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                        T K +   I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 192 FSKFIPLIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPV--PDIRWRKVLE 249

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 250 PMPSTAE---ISTSGAVLKIFNIQLEDEGTYECEAENNRGKDKHQARIYVQ 297



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+    ++V+ + +  V W  V  + +      Y+++ W   D E +   + V   
Sbjct: 777 PSEAPTEVG-VKVLSSSEISVHWEHVVEKIVES----YQIRYWAAHDKEAAAHRVQVTSQ 831

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GPPS++I   T +  P     + +     S +
Sbjct: 832 E-YSARLENLLPDTQYFVEVRACNSAGCGPPSDMIEIFTKKAPPSQPPRIISSVRSGSRY 890

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYK+ Y+
Sbjct: 891 IITWDHVVALSNESTVTGYKVLYR 914


>gi|291408744|ref|XP_002720662.1| PREDICTED: cell adhesion molecule with homology to L1CAM
           [Oryctolagus cuniculus]
          Length = 1227

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 185/717 (25%), Positives = 304/717 (42%), Gaps = 70/717 (9%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           + L+   + L C   G P PQ  W+K G  + P  R ++ NYGK+L I  V + D+G+Y 
Sbjct: 267 IVLKGDTLLLECFAEGLPTPQIEWNKMGGDL-PKGRETKENYGKTLKIDDVSYRDRGNYR 325

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C  SN +G A S++  + V   P +T +P+    +   +    C+A G P+P I W  NG
Sbjct: 326 CTASNALGTA-SHNFHVVVEEPPRWTKKPQSAVYSSGGSGVLLCEAEGEPQPTITWRVNG 384

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+    P     + P  I+  NL+ + T  Y C A+N  G +  +  ++V+   P I  
Sbjct: 385 APL-DGHPVAGDVIFPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQT 443

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFA 280
             ++ Y  V G +  L C  F +P+  V+W  +     L G RY +   G L+I++V   
Sbjct: 444 EDEESYPAVVGYSAFLHCEFFASPEAVVSWQKVEEASPLEGERYHVHRNGTLEISNVTED 503

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD----PS 336
           D+G Y+C+  N +G    + SL ++  T ++  P++  V         C + SD    PS
Sbjct: 504 DAGSYSCWVENAVGKTAVTASLDIRNATKLSVSPKNPRVPRSHVLELHCESSSDSRLKPS 563

Query: 337 LKLSIVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
           LKLS  W +  E  +   +E   +  +  +LT++  +  D G Y+C AQT LD       
Sbjct: 564 LKLS--WGKDGEAFEANGTEDGRITIDGANLTISNVTSEDQGVYSCFAQTALDNAADVTR 621

Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIREL 455
           +TV    + P N  L    + +   ++W   +  S   +   + V+    K+  G   EL
Sbjct: 622 VTVLDVPDPPENLQLSHRQN-RSVQLTWE--AGDSHNSNISEFIVEFEGNKEEPGRWEEL 678

Query: 456 IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAI 513
               G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++   
Sbjct: 679 ARVPGKDTTVLL-ALAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVH 737

Query: 514 PLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAG 571
                   +KW  +K  + NG  + Y++ ++  +G       E      + T T+  L  
Sbjct: 738 ASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGASASVEWE------EETVTNHTLRV 790

Query: 572 LEPS--TKYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN---VEGRGSTPNNLV-ISWTA 624
           +       Y + +    + G G E + +  Y     PD    V G     + LV ++W+ 
Sbjct: 791 MTSMVYAPYDVQVQAVNQLGSGPEPQAVTLYSGEDYPDTAPVVHGVDVVNSTLVKVTWST 850

Query: 625 MPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTE 684
           +P+   +     Y+I W        W    +LD R             P E+K ++ ++ 
Sbjct: 851 IPKDRVHGHLKGYQISW--------WKTRSLLDGR-----------VHPKEVKTLR-FSG 890

Query: 685 KDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
           +   G +  L            D F   S+    VLA+N    GP SE   F TPEG
Sbjct: 891 QRNHGMLPSL------------DAF---SEFHLTVLAYNSKGAGPESEPYIFQTPEG 932



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 137/578 (23%), Positives = 230/578 (39%), Gaps = 55/578 (9%)

Query: 53   LFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L C F  +P     W K  +  P+   +R      G +L I +V   D GSY+C V N V
Sbjct: 459  LHCEFFASPEAVVSWQKVEEASPLE-GERYHVHRNG-TLEISNVTEDDAGSYSCWVENAV 516

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASG----LPEPEIHWVHNGKPI 166
            G+  + +  L +  A   +V P+         +   C++S      P  ++ W  +G+  
Sbjct: 517  GKT-AVTASLDIRNATKLSVSPKNPRVPRSHVLELHCESSSDSRLKPSLKLSWGKDGEAF 575

Query: 167  -SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
             +    + R  +    +TI N+   D G Y C A  +L        V VL    ++ + P
Sbjct: 576  EANGTEDGRITIDGANLTISNVTSEDQGVYSCFAQTALDNAADVTRVTVL----DVPDPP 631

Query: 226  KDEYTV--DGKTVVLTCRVFGAPKPE-----VNWIHNQKELTGGRYTILETGDLKITDVA 278
            ++        ++V LT     +         V +  N++E   GR+  L     K T V 
Sbjct: 632  ENLQLSHRQNRSVQLTWEAGDSHNSNISEFIVEFEGNKEE--PGRWEELARVPGKDTTVL 689

Query: 279  FADSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSAT------ 326
             A +     ++   A N++G +Q S      E         P++  V A Q         
Sbjct: 690  LALAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVHASQPKEMIIKWE 749

Query: 327  -FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
              +    + P L+  + W         E E   V   +++L V  S          +A  
Sbjct: 750  PLKSMEQNGPGLEYRVTWKPQGASASVEWEEETV--TNHTLRVMTSMVYAPYDVQVQAVN 807

Query: 386  ELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV---VSWNPVSPQSLRGHFRGYKVQT 442
            +L        +T+    + P    ++  +D   +    V+W+ +    + GH +GY++  
Sbjct: 808  QLGSGPEPQAVTLYSGEDYPDTAPVVHGVDVVNSTLVKVTWSTIPKDRVHGHLKGYQISW 867

Query: 443  WTEK---DGEGSIRELIV-----NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
            W  +   DG    +E+        +       +D F   S+    VLA+N    GP SE 
Sbjct: 868  WKTRSLLDGRVHPKEVKTLRFSGQRNHGMLPSLDAF---SEFHLTVLAYNSKGAGPESEP 924

Query: 495  ISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLL 553
              F TPEGVP     L+ I +      L W  P++ NG L GY ++YQ + GT ++G L 
Sbjct: 925  YIFQTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGNLTGYLLQYQIINGTYEIGELN 984

Query: 554  ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            +    I+ P+  S +L+ L  +TKY+ +L   T  G G
Sbjct: 985  DI--NITTPSKPSWRLSNLNSTTKYKFYLRACTSKGCG 1020



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 167/434 (38%), Gaps = 62/434 (14%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P   W+KD  P N SD   I   N G   I      S  QG Y C  SN
Sbjct: 54  QIECEAKGNPEPTFRWTKDDKPFNLSDPRIIVSDNSGTFRIPNEGPVSHFQGKYRCFASN 113

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH----- 161
            +G A S  I+  V + P F  E    +   E +     C    GLP   I+W++     
Sbjct: 114 ALGIAMSEEIEFIVPSVPKFPKEKIAPLEVEEGDPTVLPCNPPKGLPPLHIYWMNIELEH 173

Query: 162 --------------------------NGKPISQAPPNPRRKVG--PNRITIENLRKSDTG 193
                                     N      A P  R  V   P ++T+ +L+ ++  
Sbjct: 174 IEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVSSLKHANDS 233

Query: 194 NYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWI 253
           +      +    + +     +L  A E  E+P     + G T++L C   G P P++ W 
Sbjct: 234 SLSTEIGSKANSIKQRKPRLLLPPAEEGAESPV--IVLKGDTLLLECFAEGLPTPQIEWN 291

Query: 254 HNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD 312
               +L  GR T    G  LKI DV++ D G Y C A N LGTA  +  + V+E    T 
Sbjct: 292 KMGGDLPKGRETKENYGKTLKIDDVSYRDRGNYRCTASNALGTASHNFHVVVEEPPRWTK 351

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID---------FESEPRF--VQS 361
           +P+     +G S    C A  +P  + +I W     P+D         F  E  F  +Q 
Sbjct: 352 KPQSAVYSSGGSGVLLCEAEGEP--QPTITWRVNGAPLDGHPVAGDVIFPREISFTNLQP 409

Query: 362 NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAP-----SNFTLIQVIDA 416
           N  ++   ++S +     T  A   +D ++ +  +  +     P     S F   +   +
Sbjct: 410 NHTAVYQCEASNVHG---TILANANIDVVDVRPLIQTEDEESYPAVVGYSAFLHCEFFAS 466

Query: 417 KKAVVSWNPVSPQS 430
            +AVVSW  V   S
Sbjct: 467 PEAVVSWQKVEEAS 480



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 116/314 (36%), Gaps = 57/314 (18%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN----RITIENLRKSDTGNY 195
           +E    EC+A G PEP   W  + KP + +  +PR  V  N    RI  E       G Y
Sbjct: 50  DEYFQIECEAKGNPEPTFRWTKDDKPFNLS--DPRIIVSDNSGTFRIPNEGPVSHFQGKY 107

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY----TVDGKTVVLTCR-VFGAPKPEV 250
            C A+N+LG    +    ++   P + + PK++       +G   VL C    G P   +
Sbjct: 108 RCFASNALGIAMSEEIEFIV---PSVPKFPKEKIAPLEVEEGDPTVLPCNPPKGLPPLHI 164

Query: 251 NWIHNQKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTV 304
            W++ + E      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV
Sbjct: 165 YWMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTV 224

Query: 305 KEHTHITDQPEDYEVEA-----------------------------GQSATFRCNAVSDP 335
               H  D     E+ +                             G +    C A   P
Sbjct: 225 SSLKHANDSSLSTEIGSKANSIKQRKPRLLLPPAEEGAESPVIVLKGDTLLLECFAEGLP 284

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
           + ++    + G  P   E++  + +    +L +   S  D G Y C A   L      A+
Sbjct: 285 TPQIEWNKMGGDLPKGRETKENYGK----TLKIDDVSYRDRGNYRCTASNAL----GTAS 336

Query: 396 LTVQVPLEAPSNFT 409
               V +E P  +T
Sbjct: 337 HNFHVVVEEPPRWT 350


>gi|281346450|gb|EFB22034.1| hypothetical protein PANDA_004020 [Ailuropoda melanoleuca]
          Length = 1021

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 192/727 (26%), Positives = 292/727 (40%), Gaps = 112/727 (15%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V L C   G P+P  IW + DG PI    R  + N    L I + +  D G Y C   N 
Sbjct: 238 VRLECFALGNPVPTIIWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGLYECVAENS 295

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P +  +   I+ A EE V +ECKA+G P+P   W+ NG+P+   
Sbjct: 296 RGKNVARG-QLTFYAQPNWIQKINDIHVAIEENVFWECKANGRPKPTYRWLKNGEPLLT- 353

Query: 170 PPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
               R ++    G   ITI NL  SD G Y C A N  G ++    ++V+A  P+ +   
Sbjct: 354 ----RDRIQIEQGTLNITIVNL--SDAGMYQCVAENKHGVIFSSAELSVIAVGPDFSRTL 407

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADS 282
               T+   G  VV+ C+   +PKP   W   +  L    R TI E G LKI +V  +D+
Sbjct: 408 LKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDILRENERITISEDGSLKIVNVTKSDA 467

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   
Sbjct: 468 GSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFT 527

Query: 343 WLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           W      IDF+ +         Q +   L +       +G+Y C  QT +D + A A L 
Sbjct: 528 WSFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYICMVQTSVDKLSAGADLI 587

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGE 449
           V+ P   P   T+ ++ D   A +SW P     SP ++      Y +Q  T         
Sbjct: 588 VRGPPGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFSVGWQAV 640

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTP 500
            ++ ELI   G++ T  V    P  +   R +A N    G PS         E +  VTP
Sbjct: 641 NTVPELI--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTP 698

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
             V G   S        S   + W  V  E  NG   GY + ++       G ++  L  
Sbjct: 699 ANVSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFRP-----YGKMIWMLTV 746

Query: 559 I--SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGR 611
           +  +D +    +   + P + + + +  +   G+G  S           P K P ++  R
Sbjct: 747 LASADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFAR 806

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
             +  ++ + W +  E                                       N+   
Sbjct: 807 SLSATDIEVFWASPME--------------------------------------KNRGRI 828

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
           Q YE+K    W   D E + R+ I   G  T+T++     ++     V A+N A  GP S
Sbjct: 829 QGYEVKY---WRHDDKEENARK-IRTIGNQTSTKITNLKGSALYHLAVKAYNTAGTGPSS 884

Query: 732 EIISFVT 738
             ++  T
Sbjct: 885 ATVNVTT 891



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 163/638 (25%), Positives = 238/638 (37%), Gaps = 85/638 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V  PE +  
Sbjct: 173 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVHFPEMVPT 232

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   +GKPI++     RR      + I N ++ D G Y 
Sbjct: 233 AKGTTVRLECFALGNPVPTIIWRRADGKPIAR---KARRHKSNGILEIPNFQQEDAGLYE 289

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P   +   D +    + V   C+  G PKP   W+ N 
Sbjct: 290 CVAENSRGKNVARGQLTFYAQ-PNWIQKINDIHVAIEENVFWECKANGRPKPTYRWLKNG 348

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           + L       +E G L IT V  +D+G Y C A NK G    S  L+V     I   P+ 
Sbjct: 349 EPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSV-----IAVGPDF 403

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  K    W +G + I  E+E R   S D SL +
Sbjct: 404 SRTLLKRVTLVKVGGEVVIECKPKASP--KPVYTWKKGRD-ILRENE-RITISEDGSLKI 459

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
              ++ D+G YTC A        +   L V+ P       + + V   +  V+       
Sbjct: 460 VNVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHD 519

Query: 429 QSL----RGHFRGYKVQTWTEKD------GEGSIRELIVNKGE---------STTTEVDK 469
            SL       F G+ +    + D      G+ S  +L++   +            T VDK
Sbjct: 520 HSLDIVFTWSFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYICMVQTSVDK 579

Query: 470 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPE 528
               +    R         GPP    +    E    T Q S    P   S   +  ++  
Sbjct: 580 LSAGADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQAR 630

Query: 529 QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
            P      + + +Q+V           +P + D  T +A + GL P  +Y          
Sbjct: 631 TP------FSVGWQAVN---------TVPELIDGKTFTATVVGLNPWVEYEFRTVAANVI 675

Query: 589 GDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F Y + +R
Sbjct: 676 GIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFR 735

Query: 643 RHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
            +     W    +     S  V  N+    F P+E+KV
Sbjct: 736 PYGK-MIWMLTVLASADASRYVFRNESVRPFSPFEVKV 772



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 140/374 (37%), Gaps = 40/374 (10%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  ++            SL+I +  +  D G+Y C  +
Sbjct: 39  KKVKLNCEVKGNPKPHIRWKLNGTDVDIGVDFRYSVVEGSLLINNPNKTQDAGTYQCIAT 98

Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFEC---KASGLPEPEIHWVHNG 163
           N  G   S    L       F T     ++  + + +   C     SG  E    W+ N 
Sbjct: 99  NSFGTVVSREAKLQFAYLENFKTRTRSTVSVRQGQGMVLLCGPPAHSG--ELSYAWIFNE 156

Query: 164 KPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY---------------- 205
            P  Q   + RR V      + I  + KSD GNY C  TN++                  
Sbjct: 157 YPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDG 213

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRY 264
           V  +    +  H PE+        T  G TV L C   G P P + W   + K +     
Sbjct: 214 VMGEYEPKIEVHFPEMVP------TAKGTTVRLECFALGNPVPTIIWRRADGKPIARKAR 267

Query: 265 TILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
                G L+I +    D+G Y C A N  G     G LT     +   +  D  V   ++
Sbjct: 268 RHKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAIEEN 327

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             + C A   P  K +  WL+  EP+        +Q    +L +T  +  D+G Y C A+
Sbjct: 328 VFWECKANGRP--KPTYRWLKNGEPLLTRDR---IQIEQGTLNITIVNLSDAGMYQCVAE 382

Query: 385 TELDFIEAQATLTV 398
            +   I + A L+V
Sbjct: 383 NKHGVIFSSAELSV 396



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 117/302 (38%), Gaps = 32/302 (10%)

Query: 119 DLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D   L  P F  EP    F   +EE+ V   C+  G P+P I W  NG  +     + R 
Sbjct: 14  DDYTLHGPVFIQEPSHVMFPLNSEEKKVKLNCEVKGNPKPHIRWKLNGTDVDIG-VDFRY 72

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            V    + I N  K+ D G Y C ATNS G V         A+        +   +V  G
Sbjct: 73  SVVEGSLLINNPNKTQDAGTYQCIATNSFGTVVSREAKLQFAYLENFKTRTRSTVSVRQG 132

Query: 234 KTVVLTCRVFGAP----KPEVNWIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYTC 287
           + +VL C   G P    +    WI N+        R+   ETG+L I  V  +D G YTC
Sbjct: 133 QGMVLLC---GPPAHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTC 189

Query: 288 FARNK------LG-----TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              N       LG       +  G +   E       PE      G +    C A+ +P 
Sbjct: 190 VVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVHFPEMVPTAKGTTVRLECFALGNPV 249

Query: 337 LKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
              +I+W R   +PI    + R  +SN   L +    + D+G Y C A+       A+  
Sbjct: 250 --PTIIWRRADGKPI--ARKARRHKSNGI-LEIPNFQQEDAGLYECVAENSRGKNVARGQ 304

Query: 396 LT 397
           LT
Sbjct: 305 LT 306



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 81/191 (42%), Gaps = 23/191 (12%)

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
           RG  +GY+V+ W   D E + R+ I   G  T+T++     ++     V A+N A  GP 
Sbjct: 825 RGRIQGYEVKYWRHDDKEENARK-IRTIGNQTSTKITNLKGSALYHLAVKAYNTAGTGPS 883

Query: 492 SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
           S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  K
Sbjct: 884 SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNK 939

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
            +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P    
Sbjct: 940 QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIP--KI 987

Query: 606 DNVEGRGSTPN 616
            N   RG+ P+
Sbjct: 988 SNAYARGAGPS 998


>gi|355559498|gb|EHH16226.1| hypothetical protein EGK_11479 [Macaca mulatta]
          Length = 1028

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 167/625 (26%), Positives = 268/625 (42%), Gaps = 48/625 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P   S +I    +   L I + +  D GSY 
Sbjct: 239 AAKGSTVKLECFALGNPIPQINWRRSDGLPF--SSKIKLRKFNGVLEIPNFQQEDAGSYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    + +  A E+++ +EC+ASG P+P   W+ NG
Sbjct: 297 CIAENSRGKNVARG-RLTYYAKPHWVQLIKDVETAVEDSLYWECRASGKPKPSYRWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +       R ++    +TI NL  +D+G + C A N  G VY    + V+A AP+ ++
Sbjct: 356 AALVL---EERIQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSK 412

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
            P  +      G  V L C+   +P+   +W      +    R ++L+ G LKI +V  A
Sbjct: 413 NPMKKLVQVQVGSLVSLDCKPRASPRARSSWKKGDVSVQEHARISLLKDGGLKIANVTKA 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L + 
Sbjct: 473 DAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDII 532

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 533 FTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADL 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
            V+     P N  + ++ D   A +SW       +PV   S++       G++  T    
Sbjct: 593 IVRGSPGPPENVKVDEITDT-TAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT---- 647

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 648 ----TVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S      GS S   + W  V  E  NG   GY + ++ +    V   ++ +    D 
Sbjct: 702 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPL---GVTTWIQTVVTSPDT 758

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y + +  Y   G+G  S    +F     P   P  V     + + 
Sbjct: 759 PRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSE 818

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FW 641
           + +SW  +P    N     Y + +W
Sbjct: 819 IEVSWNTIPWKLSNGHLLGYEVRYW 843



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 158/618 (25%), Positives = 243/618 (39%), Gaps = 48/618 (7%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V  A+       ++           P   V+ PE + AA
Sbjct: 181 LYISKVEPSDVGNYTCVVTSLVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 240

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P S       RK     + I N ++ D G+Y C
Sbjct: 241 KGSTVKLECFALGNPIPQINWRRSDGLPFSSKI--KLRKFN-GVLEIPNFQQEDAGSYEC 297

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K+V    L +   P   +  KD  T    ++   CR  G PKP   W+ N
Sbjct: 298 IAENSRG---KNVARGRLTYYAKPHWVQLIKDVETAVEDSLYWECRASGKPKPSYRWLKN 354

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
              L       +E G L I++++  DSG + C A NK G    S  L  V      +  P
Sbjct: 355 GAALVLEERIQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNP 414

Query: 315 ED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
                +V+ G   +  C   + P  + S  W +G   +  +   R     D  L +   +
Sbjct: 415 MKKLVQVQVGSLVSLDCKPRASPRARSS--WKKGD--VSVQEHARISLLKDGGLKIANVT 470

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQ 429
           + D+G YTC A+ +         L V  P     APSN   + V   +  ++        
Sbjct: 471 KADAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSN---MDVSVGESVILPCQVQHDP 527

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
            L   F  Y      +   +GS  E +   G S+   + + +    +   V       + 
Sbjct: 528 LLDIIFTWYFNGALADFKKDGSHFEKV--GGSSSGDLMIRNIQLKHSGKYVCMVQTGVDS 585

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
             S     V   G PG  ++++   +  +   L W + +  +  ++ Y I  Q+     V
Sbjct: 586 VSSAADLIV--RGSPGPPENVKVDEITDTTAQLSWKEGKDNHSPVISYSI--QARTPFSV 641

Query: 550 G-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPF 602
           G   +  +P + D  T +A +  L P  +Y   +    K G G  S      +    VP 
Sbjct: 642 GWQTVTTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
             P  V G G + + LVI+W  +PE   N   F Y + +R       W Q  V       
Sbjct: 702 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGV-TTWIQTVVTSPDTPR 760

Query: 663 LVLANQPT--FQPYEIKV 678
            V  N+    + PYE+KV
Sbjct: 761 YVFRNESIVPYSPYEVKV 778



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 168/729 (23%), Positives = 277/729 (37%), Gaps = 106/729 (14%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  +   +RI   N   +L I ++  +D G + C   N  G   
Sbjct: 339  CRASGKPKPSYRWLKNGAALVLEERIQIEN--GALTISNLSVTDSGMFQCIAENKHGLVY 396

Query: 115  SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
            S S +L V+A AP F+  P  + +       V+ +CK    P     W      + +   
Sbjct: 397  S-SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSWKKGDVSVQEHAR 455

Query: 172  NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
                K G   + I N+ K+D G Y C A N  G      ++ V+     IT AP +    
Sbjct: 456  ISLLKDG--GLKIANVTKADAGTYTCMAENQFGKANGTTHL-VVTEPTRITLAPSNMDVS 512

Query: 232  DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
             G++V+L C+V   P  ++   W  N             E  GG      +GDL I ++ 
Sbjct: 513  VGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGS----SSGDLMIRNIQ 568

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
               SG+Y C  +  + +   +  L V+                G     + + ++D + +
Sbjct: 569  LKHSGKYVCMVQTGVDSVSSAADLIVRG-------------SPGPPENVKVDEITDTTAQ 615

Query: 339  LSIVWLRG----SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD------ 388
            LS  W  G    S  I +  + R   S  +  TVT   E+  G+       EL+      
Sbjct: 616  LS--WKEGKDNHSPVISYSIQARTPFSVGWQ-TVTTVPEVIDGKTHTATVVELNPWVEYE 672

Query: 389  --------------FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
                           + ++   T +   E P +          + V++W+PV  +   G 
Sbjct: 673  FRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGE 732

Query: 435  -------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
                   FR   V TW +           V + ES        VP S    +V  +N   
Sbjct: 733  GFGYVVAFRPLGVTTWIQTVVTSPDTPRYVFRNES-------IVPYSPYEVKVGVYNNKG 785

Query: 488  NGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSV 544
             GP S + +  + E  P    S + A  L SS   + W  +  +  NG L+GY+++Y + 
Sbjct: 786  EGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNG 845

Query: 545  KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
             G +      ++        TSA+L GL+ +  Y   +  Y  AG G  S  +       
Sbjct: 846  GGKEESSSKVKVA----GNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSATVNATTKKT 901

Query: 601  -PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
             P + P NV    +T   ++++W  +  +E+ +    Y++F+R  +     N   VL+  
Sbjct: 902  PPSQPPGNVVWN-ATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQ----NNVQVLNTN 956

Query: 660  Q--SELVLANQPTFQPYEIKVVQTWTEKDGEGS----IRELIVNKGESTTTEVDKFVPAS 713
            +  +EL+L   P  + Y I+V  T    DG  S    I  +       +T+ +    P S
Sbjct: 957  KTSAELLL---PIKEDYIIEVKATTDGGDGTSSEQIRIPRITSMDARGSTSAISNVHPMS 1013

Query: 714  KNFARVLAF 722
                 VL F
Sbjct: 1014 SYLPIVLFF 1022



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 146/374 (39%), Gaps = 28/374 (7%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFSDQGSY 102
           V   ++K+ L C   G P P   W  +G  I+ S +   + N G  ++I      D G+Y
Sbjct: 39  VGSEDEKITLNCEARGNPSPHYRWQLNGSDIDTSMEHRYKLNGGNLVVINPNRNWDTGTY 98

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEI 157
            C  +N +G   S    L       F T     ++  E + V   C   G P    E   
Sbjct: 99  QCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLC---GPPPHSGELSY 155

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDVYVN 213
            W+ N  P S    + RR V      + I  +  SD GNY C  T+ +    V       
Sbjct: 156 AWIFNEYP-SFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSLVTNARVLGSPTPL 214

Query: 214 VL-------AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           VL        + P+I  + P+      G TV L C   G P P++NW  +       +  
Sbjct: 215 VLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIK 274

Query: 266 ILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
           + +  G L+I +    D+G Y C A N  G     G LT     H     +D E     S
Sbjct: 275 LRKFNGVLEIPNFQQEDAGSYECIAENSRGKNVARGRLTYYAKPHWVQLIKDVETAVEDS 334

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             + C A   P  K S  WL+    +  E     +Q  + +LT++  S  DSG + C A+
Sbjct: 335 LYWECRASGKP--KPSYRWLKNGAALVLEER---IQIENGALTISNLSVTDSGMFQCIAE 389

Query: 385 TELDFIEAQATLTV 398
            +   + + A L V
Sbjct: 390 NKHGLVYSSAELKV 403



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 125/300 (41%), Gaps = 32/300 (10%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +E+E +T  C+A G P P   W  NG  I  +  +  +  G
Sbjct: 22  LLQGPVFVKEPSNSIFPVGSEDEKITLNCEARGNPSPHYRWQLNGSDIDTSMEHRYKLNG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N + I   R  DTG Y C ATNSLG +         A+        +   +V +G+ VV
Sbjct: 82  GNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        WI N+     E    R+   ETG L I+ V  +D G YTC 
Sbjct: 142 LLC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCV 197

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
             + +  A+  GS   L ++    + +         PE      G +    C A+ +P  
Sbjct: 198 VTSLVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +++  W R S+ + F S+ +  + N   L +    + D+G Y C A+       A+  LT
Sbjct: 258 QIN--WRR-SDGLPFSSKIKLRKFNGV-LEIPNFQQEDAGSYECIAENSRGKNVARGRLT 313


>gi|312077940|ref|XP_003141521.1| hypothetical protein LOAG_05936 [Loa loa]
 gi|307763314|gb|EFO22548.1| hypothetical protein LOAG_05936, partial [Loa loa]
          Length = 1090

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 204/783 (26%), Positives = 325/783 (41%), Gaps = 120/783 (15%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSD-RISQGNYGKSLII 91
           P +QYV +   +AL     +L C F G P P  IW  +G+ I   D R +   YGK+L+ 
Sbjct: 6   PSEQYVNQSSPIALEGSVHKLHCFFSGYPEPTPIWRFNGLDIPEDDSRYTYEAYGKTLVF 65

Query: 92  KHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV-EPEFINAAEEETVTFECKAS 150
            +V    +G Y C         + +  D+ V AAPY+T   P     +E E VTF C A+
Sbjct: 66  -NVSAEIEGIYECIFKAHPNLDRRF--DVVVEAAPYWTAGPPPNKRTSEGEDVTFNCSAN 122

Query: 151 GLPEPEIHWVHNGKPISQAPPNPRR--KVGPNRITIENLRKS-----DTGNYGCNATNSL 203
           G P P I +  NG  +     +  R  ++  + +T+ N++K      D   Y C   N  
Sbjct: 123 GKPAPVISFFKNGVEMKPRDDDVNRNWEITGSVLTLRNVKKGIAGSGDNAVYQCKVENKH 182

Query: 204 GYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGR 263
           GY++ + Y+N+LA  PE+   P +   V G+ V L C+ F +P   + W      L G R
Sbjct: 183 GYLWANFYLNLLAFKPELLSDPGEVEAVVGQNVTLACKFFASPNVNITW--ESTVLHGLR 240

Query: 264 YTILET-----GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPED 316
           + ++       G L I  V     GEYTC   NK GT +G+  L ++E T +   ++P +
Sbjct: 241 HHVVPADADGEGKLIIDAVGRDAEGEYTCIGTNKHGTEKGTAHLIIREATRLEPFERPLE 300

Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDY------SLTVTK 370
            +V AGQ     C A  D +L+++  WL   +P+      +++QS  Y      SL +T 
Sbjct: 301 -KVLAGQRLELPCKAEHDENLEVTYEWLVNGKPL----IEQYIQSGHYLITDKNSLIITN 355

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVI-----DAKKAVVSWNP 425
            +  D+  YTC A+T LD ++     +VQV ++   N   +  +      A+ A +S+  
Sbjct: 356 PARYDAALYTCIAKTALDSVKK----SVQVGVDDVPNLVHMAFLTKCDDTAQIASISFEY 411

Query: 426 VSPQSLRGHFRGYKVQTWTEKDGEG-------------SIRELIVNKGESTTTEVDKFVP 472
           +         +    Q   +++ +G             S++ +  N+     T      P
Sbjct: 412 MEDIDFSAPIKEIWAQYQIDEETDGVVWLTHPHPALADSLQTVDDNQRIVKGTIDVSLRP 471

Query: 473 ASKNFARVLAFNGAYNGPPSEI---------ISFVTPEGVPGTVQSLEAIPLGSSAFYLK 523
             K   RV   N   +G P+ +         +    PEGV  T    E +       + K
Sbjct: 472 FGKYRFRVFGRNDFGDGAPTNVNGGCITPARVPDRNPEGVSATGTRPENL-----IVFWK 526

Query: 524 WVKPEQPNGVLMGYKIKYQSVKGTKVGPLLE-RLPYISDPTTT--SAKLAGLEPSTKYRI 580
            +  E  NG    Y I+Y+       G   E +   + DP +   + +L+  EP   Y +
Sbjct: 527 PMPREDWNGRNFHYIIRYRP-----AGSDAEWKEEIVEDPYSDRHTIELSVEEPFRPYEV 581

Query: 581 HLAGYTKAGDGAESKYLFYVPFKNPDNVEGR------GSTPNNL----------VISWTA 624
            +    + G    S          P +VEGR      G TP                W +
Sbjct: 582 QVRAANENGTSNVS----------PQSVEGRTGEGDPGFTPTGFKLITSDSTSATFEWDS 631

Query: 625 MP--EIEHNAPHFKYRIFWRRHNTGEA----WNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           +   +++ N    K  IFW   + GE+      +D V   R S L  +        E+  
Sbjct: 632 VDPQQVQGNFTGIKI-IFWSEEDEGESDVELETEDIVRLKRHSRLRRSKN------EVST 684

Query: 679 VQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
            QT       G  R +IV   + + T +    P S N+A++   NG  +G PS+ ISF T
Sbjct: 685 SQTSV----FGDKRSVIVAPDKKSAT-IFGLRPNSVNYAQIAVMNGQNDGTPSDPISFRT 739

Query: 739 PEG 741
            EG
Sbjct: 740 KEG 742



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 167/667 (25%), Positives = 245/667 (36%), Gaps = 136/667 (20%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVP-----INPSDRISQGNYGKSLIIKHVEFSDQ 99
           A+  + V L C F  +P     W    +      + P+D   +G     LII  V    +
Sbjct: 209 AVVGQNVTLACKFFASPNVNITWESTVLHGLRHHVVPADADGEG----KLIIDAVGRDAE 264

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI-- 157
           G YTC  +N  G  K  +  +   A      E         + +   CKA      E+  
Sbjct: 265 GEYTCIGTNKHGTEKGTAHLIIREATRLEPFERPLEKVLAGQRLELPCKAEHDENLEVTY 324

Query: 158 HWVHNGKPISQAPPNPRRKV--GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV- 214
            W+ NGKP+ +        +    N + I N  + D   Y C A  +L  V K V V V 
Sbjct: 325 EWLVNGKPLIEQYIQSGHYLITDKNSLIITNPARYDAALYTCIAKTALDSVKKSVQVGVD 384

Query: 215 ----LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ-KELTGGRYTI--- 266
               L H   +T+              +    F AP  E+ W   Q  E T G   +   
Sbjct: 385 DVPNLVHMAFLTKCDDTAQIASISFEYMEDIDFSAPIKEI-WAQYQIDEETDGVVWLTHP 443

Query: 267 -------LETGD-----LKIT-DVAFADSGEYT--CFARNKLG----TAQGSGSLT---V 304
                  L+T D     +K T DV+    G+Y    F RN  G    T    G +T   V
Sbjct: 444 HPALADSLQTVDDNQRIVKGTIDVSLRPFGKYRFRVFGRNDFGDGAPTNVNGGCITPARV 503

Query: 305 KEH-----THITDQPEDYEV----------------------EAGQSATFRCNAVSDPSL 337
            +      +    +PE+  V                       AG  A ++   V DP  
Sbjct: 504 PDRNPEGVSATGTRPENLIVFWKPMPREDWNGRNFHYIIRYRPAGSDAEWKEEIVEDPYS 563

Query: 338 KLSIVWLRGSEPID-FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
               + L   EP   +E + R    N  S    +S E  +G+                  
Sbjct: 564 DRHTIELSVEEPFRPYEVQVRAANENGTSNVSPQSVEGRTGEGD---------------- 607

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD-GEGSIR-- 453
               P   P+ F LI   D+  A   W+ V PQ ++G+F G K+  W+E+D GE  +   
Sbjct: 608 ----PGFTPTGFKLI-TSDSTSATFEWDSVDPQQVQGNFTGIKIIFWSEEDEGESDVELE 662

Query: 454 -----------ELIVNKGESTTTEVDKF--------------------VPASKNFARVLA 482
                       L  +K E +T++   F                     P S N+A++  
Sbjct: 663 TEDIVRLKRHSRLRRSKNEVSTSQTSVFGDKRSVIVAPDKKSATIFGLRPNSVNYAQIAV 722

Query: 483 FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLG------SSAFYLKWVKPEQPNGVLMG 536
            NG  +G PS+ ISF T EGVP  V++LEA P+       S+   ++W +P   NG L G
Sbjct: 723 MNGQNDGTPSDPISFRTKEGVPTPVRNLEAYPMNGRDERESAVVAVRWDRPRHYNGRLTG 782

Query: 537 YKIKYQSVKGTKVGPLLERLPY-ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AES 594
           Y I+  SV         E  P   + P     +++ LE  +KYR  + G T AG G   S
Sbjct: 783 YSIEICSVNPDGTMEQRENCPIRKTQPKERFLRISNLENDSKYRFIVYGNTNAGRGDPNS 842

Query: 595 KYLFYVP 601
           K +  +P
Sbjct: 843 KDVMTLP 849


>gi|327264223|ref|XP_003216914.1| PREDICTED: neuronal-glial cell adhesion molecule-like [Anolis
           carolinensis]
          Length = 1244

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 173/645 (26%), Positives = 265/645 (41%), Gaps = 71/645 (11%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIW-SKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           VA   + + L CI  G P P   W  K+ + + P+  +   N  K+L I +V   D G Y
Sbjct: 299 VAKLGESLVLECIVAGLPTPSVEWVHKNRLNVYPN--VVFENAKKTLRILNVTDDDDGEY 356

Query: 103 TCEVSNGVGE-AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVH 161
            C  +N  G+   +Y+++  V AAPY+  +P     A  E+V  +C+  G P+PE+ W  
Sbjct: 357 ECIATNDHGKIVLTYTVN--VEAAPYWIKKPVSQIYAPGESVRLDCEVEGKPKPEVSWRI 414

Query: 162 NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           NG P+    P  RRKV P  + I  +  +DT    C A N  G +  + Y+ VL    +I
Sbjct: 415 NGIPLEDVMPEKRRKVQPGALIINEVEPNDTAVIQCEAHNKHGSLLANAYILVLQLPAQI 474

Query: 222 TEAPKDEYT-VDGKTVVLTCRVFGAPKPEVNWIHNQKE-LTGGRYTILETGDLKITDVAF 279
                 EY+ V+ +  VL C  FG P+P V WI + K  L   R  +   G L +  V  
Sbjct: 475 LTPGGLEYSVVENQAAVLDCMAFGVPRPTVKWITDDKYVLDDIRSFLFTNGTLLLEQVQR 534

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL-K 338
            D+G +TC A N +     +  L VK  T     P + E + G++ TF C  + D ++ +
Sbjct: 535 QDAGNFTCIADNDVYEDSITARLIVKGATTFEVGPVNTEKKEGETVTFHCKVLFDETIPE 594

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             I W R  + I    E      ND SL +T     D G Y+C A T LD +E  A L V
Sbjct: 595 HGIKWRRNGKVIQESDENEKYFINDTSLMITNLDYSDQGIYSCLAWTALDSVEKSAKLVV 654

Query: 399 QVPLEAPSNFTLIQVIDAK---------------------------------KAVVSWNP 425
                  SN  L++  D +                                   +++W P
Sbjct: 655 YGKPGPVSNLELLRQQDHQVKLTWTPGDDHNRDIEAPDQNPADVRGEGNETTNMIITWTP 714

Query: 426 VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNG 485
             P         Y VQ W +++ E    E  V       T    F P      +V A N 
Sbjct: 715 FLPWEWNAPSLKYHVQ-WRQEN-EDQWNETEVEAPPVVVTGTPVFTPYE---IKVQARNE 769

Query: 486 AYNGPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQ 542
              GP   I    + E VP  + ++L    L S+   L W+ P  E+  G L G+++ + 
Sbjct: 770 FGKGPEPSIELGYSGEDVPEAIPENLAVEVLNSTTIKLSWILPNREKIFGHLKGFQVYF- 828

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAK------------LAGLEPSTKYRIHLAGYTKAGD 590
                 +G + +R    +   T S              L G  P ++YR+ ++     G+
Sbjct: 829 ----FWLGTMADRSRRQARAHTHSHGKVLIEGDVSEIILGGFRPWSRYRVQMSVLNGRGE 884

Query: 591 GAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHF 635
           G  S+    + F  P+ V  R  + +   +S T +  +E   P F
Sbjct: 885 GPHSE---AIEFGTPEGVPSRPESLHMEFLSNTTV-TLEWTPPRF 925



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 154/617 (24%), Positives = 250/617 (40%), Gaps = 96/617 (15%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN---PSDR--ISQGNYGKSLIIKHVEFSDQGSYT 103
           + V L C   G P P+  W  +G+P+    P  R  +  G    +LII  VE +D     
Sbjct: 394 ESVRLDCEVEGKPKPEVSWRINGIPLEDVMPEKRRKVQPG----ALIINEVEPNDTAVIQ 449

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFI--NAAEEETVTFECKASGLPEPEIHWVH 161
           CE  N  G   + +  L VL  P   + P  +  +  E +    +C A G+P P + W+ 
Sbjct: 450 CEAHNKHGSLLANAYIL-VLQLPAQILTPGGLEYSVVENQAAVLDCMAFGVPRPTVKWIT 508

Query: 162 NGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVN--VLAHA 218
           + K +     + R  +  N  + +E +++ D GN+ C A N    VY+D      ++  A
Sbjct: 509 DDKYVLD---DIRSFLFTNGTLLLEQVQRQDAGNFTCIADND---VYEDSITARLIVKGA 562

Query: 219 PEITEAPKDEYTVDGKTVVLTCRV-FGAPKPE--VNWIHNQKELTGG----RYTILETGD 271
                 P +    +G+TV   C+V F    PE  + W  N K +       +Y I +T  
Sbjct: 563 TTFEVGPVNTEKKEGETVTFHCKVLFDETIPEHGIKWRRNGKVIQESDENEKYFINDTS- 621

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTV-------------KEHTHIT------- 311
           L IT++ ++D G Y+C A   L + + S  L V             ++  H         
Sbjct: 622 LMITNLDYSDQGIYSCLAWTALDSVEKSAKLVVYGKPGPVSNLELLRQQDHQVKLTWTPG 681

Query: 312 -DQPEDYEVEAGQSATFR------CNAV-----------SDPSLKLSIVWLRGSEP---- 349
            D   D E      A  R       N +           + PSLK  + W + +E     
Sbjct: 682 DDHNRDIEAPDQNPADVRGEGNETTNMIITWTPFLPWEWNAPSLKYHVQWRQENEDQWNE 741

Query: 350 IDFESEPRFVQSND----YSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAP 405
            + E+ P  V        Y + V   +E   G        EL +          VP   P
Sbjct: 742 TEVEAPPVVVTGTPVFTPYEIKVQARNEFGKGP---EPSIELGYSGED------VPEAIP 792

Query: 406 SNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-WTEKDGEGSIREL--------- 455
            N   ++V+++    +SW   + + + GH +G++V   W     + S R+          
Sbjct: 793 ENLA-VEVLNSTTIKLSWILPNREKIFGHLKGFQVYFFWLGTMADRSRRQARAHTHSHGK 851

Query: 456 IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPL 515
           ++ +G+ +   +  F P S+   ++   NG   GP SE I F TPEGVP   +SL    L
Sbjct: 852 VLIEGDVSEIILGGFRPWSRYRVQMSVLNGRGEGPHSEAIEFGTPEGVPSRPESLHMEFL 911

Query: 516 GSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSA-KLAGLEP 574
            ++   L+W  P  PNG L+ Y + YQ    T     +  +  I+ P T     ++ L+P
Sbjct: 912 SNTTVTLEWTPPRFPNGKLLRYVLAYQQANQTSNQTNMGFVSGITIPATQLMFNVSDLDP 971

Query: 575 STKYRIHLAGYTKAGDG 591
            T Y  +L+  T+ G G
Sbjct: 972 YTPYNFYLSAETREGSG 988



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 162/391 (41%), Gaps = 36/391 (9%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSD--RISQGNYGKSLIIK----HV 94
           K+ V     +V + C   G P  +  W+KDG   NP++   ++Q     +++I     +V
Sbjct: 91  KELVVFPTDEVTVRCQASGNPPVEFHWTKDGKEFNPNEVPGMTQRKGSGTIVITTNNGNV 150

Query: 95  EFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVT-FECK--ASG 151
               +G Y C  +N +G A SY   +   +AP +  E       EE T T   C    S 
Sbjct: 151 ATKFKGVYRCYATNSLGTAMSYESRIIAESAPQWPKEKVAPITVEEGTHTILPCNPPISA 210

Query: 152 LPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTG-NYGCNATNSLGYV--- 206
           +P P+I+W+++   I     + R  +G +  +   N++ +D+  +Y CNA      V   
Sbjct: 211 VP-PKIYWLNSR--IEHIVQDERVTIGQDGNLYFANVQMTDSRPDYICNAHFQGPRVIIQ 267

Query: 207 -----YKDVYVNVLAHAPEITEAPKDEYTVD----GKTVVLTCRVFGAPKPEVNWIHNQK 257
                 K    N L+H   +   P+   T      G+++VL C V G P P V W+H  +
Sbjct: 268 KEPIELKVTTTNTLSHKKPMRIMPEKRQTTYVAKLGESLVLECIVAGLPTPSVEWVHKNR 327

Query: 258 ELTGGRYTILETGD--LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE 315
            L      + E     L+I +V   D GEY C A N  G    + ++ V+   +   +P 
Sbjct: 328 -LNVYPNVVFENAKKTLRILNVTDDDDGEYECIATNDHGKIVLTYTVNVEAAPYWIKKPV 386

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSE 373
                 G+S    C     P  K  + W     P++     + R VQ    +L + +   
Sbjct: 387 SQIYAPGESVRLDCEVEGKP--KPEVSWRINGIPLEDVMPEKRRKVQPG--ALIINEVEP 442

Query: 374 LDSGQYTCRAQTELDFIEAQA-TLTVQVPLE 403
            D+    C A  +   + A A  L +Q+P +
Sbjct: 443 NDTAVIQCEAHNKHGSLLANAYILVLQLPAQ 473



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 601 PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ 660
           P +NP +V G G+   N++I+WT     E NAP  KY + WR+ N  + WN+ +V     
Sbjct: 691 PDQNPADVRGEGNETTNMIITWTPFLPWEWNAPSLKYHVQWRQENE-DQWNETEV---EA 746

Query: 661 SELVLANQPTFQPYEIKV 678
             +V+   P F PYEIKV
Sbjct: 747 PPVVVTGTPVFTPYEIKV 764



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 122/305 (40%), Gaps = 42/305 (13%)

Query: 132 PEFINAAEEETVTF-------ECKASGLPEPEIHWVHNGKPI--SQAPPNPRRKVGPNRI 182
           PEF    E+E V F        C+ASG P  E HW  +GK    ++ P   +RK G   I
Sbjct: 83  PEFSEQPEKELVVFPTDEVTVRCQASGNPPVEFHWTKDGKEFNPNEVPGMTQRK-GSGTI 141

Query: 183 TIE----NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            I     N+     G Y C ATNSLG         +   AP+  +      TV +G   +
Sbjct: 142 VITTNNGNVATKFKGVYRCYATNSLGTAMSYESRIIAESAPQWPKEKVAPITVEEGTHTI 201

Query: 238 LTCR-VFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFADSG-EYTCFARNK- 292
           L C     A  P++ W++++ E  +   R TI + G+L   +V   DS  +Y C A  + 
Sbjct: 202 LPCNPPISAVPPKIYWLNSRIEHIVQDERVTIGQDGNLYFANVQMTDSRPDYICNAHFQG 261

Query: 293 ----------LGTAQGSGSLTVKEHTHITDQPED--YEVEAGQSATFRCNAVSDPSLKLS 340
                           + +L+ K+   I  +     Y  + G+S    C     P+   S
Sbjct: 262 PRVIIQKEPIELKVTTTNTLSHKKPMRIMPEKRQTTYVAKLGESLVLECIVAGLPT--PS 319

Query: 341 IVWLRGSEPIDFESEPRFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W+  +        P  V  N   +L +   ++ D G+Y C A  +      +  LT  
Sbjct: 320 VEWVHKNR---LNVYPNVVFENAKKTLRILNVTDDDDGEYECIATND----HGKIVLTYT 372

Query: 400 VPLEA 404
           V +EA
Sbjct: 373 VNVEA 377


>gi|341891741|gb|EGT47676.1| hypothetical protein CAEBREN_11960 [Caenorhabditis brenneri]
          Length = 1186

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 156/506 (30%), Positives = 241/506 (47%), Gaps = 53/506 (10%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALR-NKKVELFCIFGGTPLPQ 64
           R EY+ G+RI L+     I  +Q +  P ++      EV +R   +++L CIFGG PLP 
Sbjct: 213 RGEYRSGDRIQLD-----IEPTQEKSHPVKKLSVSPSEVTVRAGSQLKLQCIFGGRPLPT 267

Query: 65  TIWSK-DGVPINPSDRI-----SQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSI 118
             WSK DG    P  R+     S+ ++G+SLI+++V   D G Y C      G    +++
Sbjct: 268 IFWSKVDGEL--PKSRLKDLTSSESDFGRSLIVENVHPDDAGVYECR-----GRHLVHTV 320

Query: 119 DLSVLAAPYFTVEP-EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
           ++ V+AAP++  +P   I+  EE T   EC A G P P I W  NGK + +   + RR +
Sbjct: 321 NVRVMAAPFWEFDPPRDISLPEENTGELECLAGGQPTPIITWSMNGKFLHELAEDSRRVL 380

Query: 178 GPN-RIT-IENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEAPKDEYTVDG 233
             + RI  + +L    DTG Y CNA+N LGYV+ + +V+V AHAP     A +    V  
Sbjct: 381 LDHGRILRVRSLNHDLDTGVYQCNASNPLGYVFANAFVHVRAHAPFFRMPAARHWKVVLH 440

Query: 234 KTVVLTCRVFGAPKPEVNWIHNQK---ELTGGRYTILETGDLKITDVAFADSGEYTCFAR 290
            TV+L C V  AP+  V W+       ++  G+  +       I DV  AD G Y C   
Sbjct: 441 STVILDCDVDAAPEAVVRWVDADDRPLQVVEGKNKLFPNHTFMIYDVNSADEGLYYCNVS 500

Query: 291 NKLGTAQGSGSLTVKEHTHITD--QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
           NK G  + +  L V + T+      P+   +EAG++A   C AV+DP L +   W    +
Sbjct: 501 NKYGINRATNRLQVFKPTYFVRIPTPKRLVLEAGETAEVFCEAVADPRLPIKYQWTINGK 560

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNF 408
            +   +E ++ +     L         SG   C A T++D   A   L V+   + P++ 
Sbjct: 561 VL---TESQYYEILPDRLRFRSVRGRHSGIIDCAAITDVDVKLASMQLIVK---DVPAH- 613

Query: 409 TLIQVIDA-----KKAVVSWNPVSPQSLRGHFRGYKVQTWTE-KDGEGSI--RELIVNKG 460
               V++A     +KA + W  V+        + Y V+ +T+ K  E  +   E+ VNK 
Sbjct: 614 ---PVVEAAHCSERKANIKW--VAASDHGDSIKKYIVEMFTDFKKNEWEVINEEVNVNK- 667

Query: 461 ESTTTEVDKFVPASKNFA-RVLAFNG 485
                EVD  +    N+  RV+A N 
Sbjct: 668 --ENFEVDITLTPWVNYTFRVVAVNS 691



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 137/293 (46%), Gaps = 21/293 (7%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP EAP +F +   I+      +WNPV   ++ GHF GY+++ W     E ++R+  +  
Sbjct: 818  VPDEAPRDFRIDTQINFTTINFTWNPVDANTVNGHFVGYEIEYWK---AENTVRKYSIKI 874

Query: 460  GESTTTEVDKFVPASKNF-ARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSS 518
              ++T ++     A  N+ A +   N      PS  +SF  PEG PG V +L    +GS+
Sbjct: 875  PANSTYKIINSFHAVTNYSAHIRTRNKRLRSAPSHPVSFAMPEGPPGKVHNLRVYSVGST 934

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKG-TKVGPLLERLPYISDPTTTSAKLAGLEPSTK 577
            A  L+W  P QPNG + GY I +Q+ K  T+   ++ R  Y     +        EP T 
Sbjct: 935  AILLQWDAPLQPNGRIRGYFISFQNDKNETEETYVIHRQKYYLHEKS--------EPDTG 986

Query: 578  YRIHLAGYTKAGDGAES-KYLFYVPFKNPDN--VEGRGSTPNNLVISWTAMPEIEHNAPH 634
            Y++ +   T+AG+G  + + +   P + PD      +  T ++ V+ W          P 
Sbjct: 987  YKVSVWAETRAGEGPTTLRPVRTWPSRIPDAPVFRVKNITLDSFVVEWLPNNHSVWKMPG 1046

Query: 635  FKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDG 687
              + + +   ++   W+Q +++    +E++L N    Q Y I+ +     KDG
Sbjct: 1047 AAFFVNYTAESSN-TWHQTEIIYLPNTEILLRNLKEDQKYFIQGIA----KDG 1094



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 44/78 (56%)

Query: 601 PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ 660
           P+ NP  V+G G+ P+NLVISW  +     NAP+ +Y + ++       W +  V D   
Sbjct: 717 PYTNPTGVKGEGTEPDNLVISWKPLDRYYWNAPNMQYLVRYKLDEPIHGWTEFLVEDSLA 776

Query: 661 SELVLANQPTFQPYEIKV 678
           +  ++ +QPTF+ Y I+V
Sbjct: 777 NYTIIRDQPTFRKYLIQV 794


>gi|410925449|ref|XP_003976193.1| PREDICTED: LOW QUALITY PROTEIN: contactin-2-like [Takifugu
           rubripes]
          Length = 1041

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 175/683 (25%), Positives = 287/683 (42%), Gaps = 53/683 (7%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGV-PINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           L  +  +L C   G P+P+  W K DG+ P      +     G +L +  + F D+G Y 
Sbjct: 250 LAGQTAQLECFAYGNPVPKLRWRKVDGLLPAKSGSSVE----GPTLTLPDLSFDDEGIYE 305

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKASGLPEPEIHWV 160
           CE  N  G + +Y   +SV A P +    + ++ +E E    + + C A+G P+P + W+
Sbjct: 306 CEAYNSQG-SDAYQGRISVQAQPQWL---QVMSDSEVEISSELLWSCIAAGKPKPSVRWL 361

Query: 161 HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
            NG+ IS      R +V   R+ I NL   D+G Y C A N  G +Y    + V   AP+
Sbjct: 362 RNGQSIST---QDRVEVNGARLKISNLALEDSGMYQCVAENKHGTIYSSAELRVQVQAPD 418

Query: 221 ITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDV 277
               P  +      G  V + CR   APKP + W    + LT   R T+   G L I ++
Sbjct: 419 FRLNPVRKLIPAARGGQVKIECRPRAAPKPSLFWSRGTELLTNSSRVTVAPDGVLSILNI 478

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
           + AD G+YTCFA N LG A  +G L+V++ T IT  P + ++  G++ + +C+A  DP++
Sbjct: 479 SRADEGKYTCFAENYLGKANSTGHLSVRDATKITLAPSNADINQGENVSLQCHAAHDPTM 538

Query: 338 KLSIVWLRGSEPIDFESEP----RFV-QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
            LS  W      +D E       R   + N   L +  +    +G YTC AQT +D   A
Sbjct: 539 DLSFSWNLNGVMLDLEDSAGPYHRIEGKENIGDLIILNAQLSQAGVYTCTAQTVVDSASA 598

Query: 393 QATLTVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHFRGYKVQTWTE 445
            A L V+ P   P    L++ +      + W       +P+    +RG  R      W +
Sbjct: 599 VAKLVVRGPPGPPGGL-LVKNVAETSVELRWSRGYDNHSPIGKYVIRG--RWALSSQWRQ 655

Query: 446 KDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPG 505
              E S  E     G + +  V   +P      +V+A N   +G PS     V  +    
Sbjct: 656 MRTEPSNIE-----GNAESARVIGLMPWMDYEFQVIASNILGSGEPSMASHTVRTQQAAP 710

Query: 506 TV--QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
           TV    L           + W  +  E  NG   GY + ++  +      L  ++P + D
Sbjct: 711 TVAPSGLGGGGGDRHELIITWTPMAREYQNGDGFGYILAFKRTEAPTWTTL--KIPQV-D 767

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEGRGSTPN 616
            +        L P + + + +  Y   G+G  S+          P   P  +     +  
Sbjct: 768 SSRYVYYNDSLSPYSPFVVKIRAYNCRGEGPFSQIAVVHSAEEEPTLGPLGINATALSAF 827

Query: 617 NLVISWTAMPEIEHNAPHFKYRI-FWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYE 675
            + +SW  + ++  +     Y I +WR+H    A ++   L    S  V   +P+ + Y 
Sbjct: 828 EIQVSWDPIHQLSTDVLLRGYEIRYWRQHEREAAADRVRTLGQETSARVSGLRPSTR-YH 886

Query: 676 IKVVQTWTEKDGEGSIRELIVNK 698
           + V+   +   G  S R  +  +
Sbjct: 887 VAVLAYNSAGTGPSSPRTTVTTR 909



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 174/710 (24%), Positives = 288/710 (40%), Gaps = 92/710 (12%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            CI  G P P   W ++G  I+  DR+     G  L I ++   D G Y C   N  G   
Sbjct: 348  CIAAGKPKPSVRWLRNGQSISTQDRVEVN--GARLKISNLALEDSGMYQCVAENKHGTIY 405

Query: 115  SYSIDLSV-LAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
            S S +L V + AP F + P  + I AA    V  EC+    P+P + W    + ++ +  
Sbjct: 406  S-SAELRVQVQAPDFRLNPVRKLIPAARGGQVKIECRPRAAPKPSLFWSRGTELLTNSS- 463

Query: 172  NPRRKVGPNRI-TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
              R  V P+ + +I N+ ++D G Y C A N LG      +++V   A +IT AP +   
Sbjct: 464  --RVTVAPDGVLSILNISRADEGKYTCFAENYLGKANSTGHLSV-RDATKITLAPSNADI 520

Query: 231  VDGKTVVLTCRVFGAPKPEVNWIHNQK------ELTGGRYTILE----TGDLKITDVAFA 280
              G+ V L C     P  ++++  N        E + G Y  +E     GDL I +   +
Sbjct: 521  NQGENVSLQCHAAHDPTMDLSFSWNLNGVMLDLEDSAGPYHRIEGKENIGDLIILNAQLS 580

Query: 281  DSGEYTCFARNKLGTAQGSGSLTVKEHTH-----ITDQPEDYEVEAGQSATFRCNAVSDP 335
             +G YTC A+  + +A     L V+         +     +  VE   S  +  ++   P
Sbjct: 581  QAGVYTCTAQTVVDSASAVAKLVVRGPPGPPGGLLVKNVAETSVELRWSRGYDNHS---P 637

Query: 336  SLKLSIV--WLRGSEPIDFESEPRFVQSN-------------DYSLTVTKSSELDSGQYT 380
              K  I   W   S+     +EP  ++ N             DY   V  S+ L SG+ +
Sbjct: 638  IGKYVIRGRWALSSQWRQMRTEPSNIEGNAESARVIGLMPWMDYEFQVIASNILGSGEPS 697

Query: 381  CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGY-- 438
              + T    +  Q       P  APS        D  + +++W P++ +   G   GY  
Sbjct: 698  MASHT----VRTQQA----APTVAPSG-LGGGGGDRHELIITWTPMAREYQNGDGFGYIL 748

Query: 439  -----KVQTWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                 +  TWT  +     S R +  N         D   P S    ++ A+N    GP 
Sbjct: 749  AFKRTEAPTWTTLKIPQVDSSRYVYYN---------DSLSPYSPFVVKIRAYNCRGEGPF 799

Query: 492  SEIISFVTPEGVPGTVQSLEAIPLGSSAFYLK--W--VKPEQPNGVLMGYKIKYQSVKGT 547
            S+I    + E  P T+  L       SAF ++  W  +     + +L GY+I+Y      
Sbjct: 800  SQIAVVHSAEEEP-TLGPLGINATALSAFEIQVSWDPIHQLSTDVLLRGYEIRYWRQHER 858

Query: 548  KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PF 602
            +     +R+  +     TSA+++GL PST+Y + +  Y  AG G  S           P 
Sbjct: 859  EAAA--DRVRTLGQ--ETSARVSGLRPSTRYHVAVLAYNSAGTGPSSPRTTVTTRKPPPN 914

Query: 603  KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
            + P N+  R +    + + W  +  + + +    Y++ ++     E  +   VLD  +S 
Sbjct: 915  RRPGNISWR-TDDAWVTVRWDHVMALHNESAVLGYKVLYKH----EGQSTLKVLDKSRST 969

Query: 663  LVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPA 712
            + L   P    Y +  +++W E  G+G   E+IV++   T   V    P+
Sbjct: 970  VKLL-LPKDNSYVVLEIRSWGE-GGDGPAHEIIVSRDSGTGMMVQNGSPS 1017



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 143/374 (38%), Gaps = 24/374 (6%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVE-FSDQGSYTC 104
           L   KV L C    +P     W  +G  +     +       SL+I   E   D GSY C
Sbjct: 46  LTEGKVILSCQARASPAASYRWLVNGTEVPLGLDLRYTLVAGSLVISSPESVRDTGSYQC 105

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTF-ECKAS-GLPEPEIHWVHN 162
              N  G   S +  +       F  +      A E   TF  C+     P     W  N
Sbjct: 106 LAINRCGTIVSKAASVKFGYLNDFPTDSRSPQTAYEGAGTFLACRPPPHYPALSYRWFIN 165

Query: 163 GKP--ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY-----VN 213
             P  +     + R  V      + +    ++DTGNY C  T ++    K  +     + 
Sbjct: 166 EFPNFLKNEKSDGRWFVSQVTGNLYLAKAEQNDTGNYFCFTTINMDISSKSTFSRPNQLT 225

Query: 214 VLAHA------PEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
           VL+ A      P I    P + Y + G+T  L C  +G P P++ W      L     + 
Sbjct: 226 VLSDANPRKSTPSIKVRFPAETYRLAGQTAQLECFAYGNPVPKLRWRKVDGLLPAKSGSS 285

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
           +E   L + D++F D G Y C A N  G+    G ++V+          D EVE      
Sbjct: 286 VEGPTLTLPDLSFDDEGIYECEAYNSQGSDAYQGRISVQAQPQWLQVMSDSEVEISSELL 345

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + C A   P  K S+ WLR  + I  +     V+ N   L ++  +  DSG Y C A+ +
Sbjct: 346 WSCIAAGKP--KPSVRWLRNGQSISTQDR---VEVNGARLKISNLALEDSGMYQCVAENK 400

Query: 387 LDFIEAQATLTVQV 400
              I + A L VQV
Sbjct: 401 HGTIYSSAELRVQV 414



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 74/167 (44%), Gaps = 9/167 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           RK   A R  +V++ C     P P   WS+    +  S R++    G  L I ++  +D+
Sbjct: 425 RKLIPAARGGQVKIECRPRAAPKPSLFWSRGTELLTNSSRVTVAPDG-VLSILNISRADE 483

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI-- 157
           G YTC   N +G+A S    LSV  A   T+ P   +  + E V+ +C A+  P  ++  
Sbjct: 484 GKYTCFAENYLGKANSTG-HLSVRDATKITLAPSNADINQGENVSLQCHAAHDPTMDLSF 542

Query: 158 HWVHNGKPI---SQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNA 199
            W  NG  +     A P  R +   N   + I N + S  G Y C A
Sbjct: 543 SWNLNGVMLDLEDSAGPYHRIEGKENIGDLIILNAQLSQAGVYTCTA 589


>gi|301778243|ref|XP_002924539.1| PREDICTED: contactin-1-like [Ailuropoda melanoleuca]
          Length = 1121

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 189/729 (25%), Positives = 299/729 (41%), Gaps = 92/729 (12%)

Query: 33   PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
            P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 344  PADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 401

Query: 93   HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
            +++  D+G+Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 402  NIQLEDEGTYECEAENNRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 457

Query: 150  SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
            +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 458  TGKPIPTIRWLKNGYAYHKG------ELRLYDVTFEN-----AGMYQCIAENTHGAIYAN 506

Query: 210  VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
              + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 507  AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 566

Query: 267  LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
             E G L+I ++   D G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 567  WEDGSLEINNITRNDGGIYTCFAENNRGRANNTGTLVITDPTRIILAPINADITVGENAT 626

Query: 327  FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
             +C A  DP+L L+ +W      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 627  MQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 686

Query: 382  RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
             AQT +D   A A L V+ P   P     I+ I A    +SW+  S          Y +Q
Sbjct: 687  TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALSWSRGSDN--HSPISKYTIQ 743

Query: 442  TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
            T T    D + +  +  + +G          +P  +   RV+A N    G PS   + + 
Sbjct: 744  TKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIK 803

Query: 500  PEGVPGTVQSLEAIPLGSS--AFYLKWV--KPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
             +G    V   +    G S     + WV    E   G   GY + ++   G +   +   
Sbjct: 804  TDGAAPNVAPSDVGGGGGSNRELTITWVPLSREYHYGNNFGYIVAFKPFDGEEWKKVT-- 861

Query: 556  LPYISDPTTTS--AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS 613
               +++P T     K   + PST +++ +  +   GDG         P+           
Sbjct: 862  ---VTNPDTGRYVHKDETMRPSTAFQVKVKAFNNKGDG---------PY----------- 898

Query: 614  TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVL----ANQP 669
                   S TA+     +AP              EA  +  V     SE+ +      + 
Sbjct: 899  -------SLTAVINSAQDAP-------------SEAPTEVGVKVLSSSEISVHWEHVVEK 938

Query: 670  TFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGP 729
              + Y+I+    W   D E +   + V   E  +  ++  +P ++ F  V A N A  GP
Sbjct: 939  IVESYQIRY---WAAHDKEAAAHRVQVTSQE-YSARLENLLPDTQYFVEVRACNSAGCGP 994

Query: 730  PSEIISFVT 738
            PS++I   T
Sbjct: 995  PSDMIEIFT 1003



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 155/657 (23%), Positives = 248/657 (37%), Gaps = 85/657 (12%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 292 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTKPYPADIVV 349

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  I A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 350 QFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 406

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N+ G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 407 DEGTYECEAENNRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 465

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 466 RWLKN-----GYAY---HKGELRLYDVTFENAGMYQCIAENTHGAIYANAELKILALAPT 517

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   D SL 
Sbjct: 518 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 573

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC A+          TL +  P   + AP N  +    +A  +   S+
Sbjct: 574 INNITRNDGGIYTCFAENNRGRANNTGTLVITDPTRIILAPINADITVGENATMQCAASF 633

Query: 424 NPVSPQSLRGHFRGYKV-----------QTWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
           +P    +    F GY +               + +GE  IR   +      T      V 
Sbjct: 634 DPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVD 693

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
            S   A ++                    G PG    L    + +++  L W +    + 
Sbjct: 694 NSSASADLVV------------------RGPPGPPGGLRIEDIRATSVALSWSRGSDNHS 735

Query: 533 VLMGYKIKYQSV-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
            +  Y I+ +++     K  K  P     P I +    +A+   L P  +Y   +     
Sbjct: 736 PISKYTIQTKTILSDDWKDAKTDP-----PII-EGNMEAARAVDLIPWMEYEFRVVATNT 789

Query: 588 AGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            G G  S      K     P   P +V G G +   L I+W  +    H   +F Y + +
Sbjct: 790 LGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWVPLSREYHYGNNFGYIVAF 849

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
           +  + GE W +  V +      V  ++ T +P   +++KV     + DG  S+  +I
Sbjct: 850 KPFD-GEEWKKVTVTNPDTGRYVHKDE-TMRPSTAFQVKVKAFNNKGDGPYSLTAVI 904



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 140/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   I+  SDR S    G +L+I + +   D G Y C  S
Sbjct: 163 KVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 220

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 221 NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 274

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 275 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 331

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 332 LIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 391

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 392 STSGAVLKIFNIQLEDEGTYECEAENNRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 451

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+       + E R      Y +T       ++G Y C A+ 
Sbjct: 452 YWPCVATGKPI--PTIRWLKNGYAY-HKGELRL-----YDVTFE-----NAGMYQCIAEN 498

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 499 THGAIYANAELKI 511



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   I     +    VG N +   
Sbjct: 150 PINTIYPE---ESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTS-DRYSMVGGNLVINN 205

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   +
Sbjct: 206 PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 265

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 266 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 325

Query: 299 SGSL---------TVKEH-THITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                        T K +   I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 326 FSKFIPLIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPV--PDIRWRKVLE 383

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 384 PMPSTAE---ISTSGAVLKIFNIQLEDEGTYECEAENNRGKDKHQARIYVQ 431



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 8/144 (5%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P EAP+    ++V+ + +  V W  V  + +      Y+++ W   D E +   + V   
Sbjct: 911  PSEAPTEVG-VKVLSSSEISVHWEHVVEKIVES----YQIRYWAAHDKEAAAHRVQVTSQ 965

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
            E  +  ++  +P ++ F  V A N A  GPPS++I   T +  P     + +     S +
Sbjct: 966  E-YSARLENLLPDTQYFVEVRACNSAGCGPPSDMIEIFTKKAPPSQPPRIISSVRSGSRY 1024

Query: 521  YLKW--VKPEQPNGVLMGYKIKYQ 542
             + W  V        + GYK+ Y+
Sbjct: 1025 IITWDHVVALSNESTVTGYKVLYR 1048


>gi|380788833|gb|AFE66292.1| contactin-3 precursor [Macaca mulatta]
          Length = 1028

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 167/625 (26%), Positives = 268/625 (42%), Gaps = 48/625 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P   S +I    +   L I + +  D GSY 
Sbjct: 239 AAKGSTVKLECFALGNPIPQINWRRSDGLPF--SSKIKLRKFNGVLEIPNFQQEDAGSYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    + +  A E+++ +EC+ASG P+P   W+ NG
Sbjct: 297 CIAENSRGKNVARG-RLTYYAKPHWVQLIKDVETAVEDSLYWECRASGKPKPSYRWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +       R ++    +TI NL  +D+G + C A N  G VY    + V+A AP+ ++
Sbjct: 356 AALVL---EERIQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSK 412

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
            P  +      G  V L C+   +P+   +W      +    R ++L+ G LKI +V  A
Sbjct: 413 NPMKKLVQVQVGSLVSLDCKPRASPRARSSWKKGDVSVQEHARISLLKDGGLKIANVTKA 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L + 
Sbjct: 473 DAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDII 532

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 533 FTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADL 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
            V+     P N  + ++ D   A +SW       +PV   S++       G++  T    
Sbjct: 593 IVRGSPGPPENVKVDEITDT-TAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT---- 647

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 648 ----TVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S      GS S   + W  V  E  NG   GY + ++ +    V   ++ +    D 
Sbjct: 702 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPL---GVTTWIQTVVTSPDT 758

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y + +  Y   G+G  S    +F     P   P  V     + + 
Sbjct: 759 PRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSE 818

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FW 641
           + +SW  +P    N     Y + +W
Sbjct: 819 IEVSWNTIPWKLSNGHLLGYEVRYW 843



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 156/618 (25%), Positives = 243/618 (39%), Gaps = 48/618 (7%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V  A+       ++           P   V+ PE + AA
Sbjct: 181 LYISKVEPSDVGNYTCVVTSLVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 240

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P S      + +     + I N ++ D G+Y C
Sbjct: 241 KGSTVKLECFALGNPIPQINWRRSDGLPFSS---KIKLRKFNGVLEIPNFQQEDAGSYEC 297

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K+V    L +   P   +  KD  T    ++   CR  G PKP   W+ N
Sbjct: 298 IAENSRG---KNVARGRLTYYAKPHWVQLIKDVETAVEDSLYWECRASGKPKPSYRWLKN 354

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
              L       +E G L I++++  DSG + C A NK G    S  L  V      +  P
Sbjct: 355 GAALVLEERIQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNP 414

Query: 315 ED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
                +V+ G   +  C   + P  + S  W +G   +  +   R     D  L +   +
Sbjct: 415 MKKLVQVQVGSLVSLDCKPRASPRARSS--WKKGD--VSVQEHARISLLKDGGLKIANVT 470

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQ 429
           + D+G YTC A+ +         L V  P     APSN   + V   +  ++        
Sbjct: 471 KADAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSN---MDVSVGESVILPCQVQHDP 527

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
            L   F  Y      +   +GS  E +   G S+   + + +    +   V       + 
Sbjct: 528 LLDIIFTWYFNGALADFKKDGSHFEKV--GGSSSGDLMIRNIQLKHSGKYVCMVQTGVDS 585

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
             S     V   G PG  ++++   +  +   L W + +  +  ++ Y I  Q+     V
Sbjct: 586 VSSAADLIV--RGSPGPPENVKVDEITDTTAQLSWKEGKDNHSPVISYSI--QARTPFSV 641

Query: 550 G-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPF 602
           G   +  +P + D  T +A +  L P  +Y   +    K G G  S      +    VP 
Sbjct: 642 GWQTVTTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
             P  V G G + + LVI+W  +PE   N   F Y + +R       W Q  V       
Sbjct: 702 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGV-TTWIQTVVTSPDTPR 760

Query: 663 LVLANQPT--FQPYEIKV 678
            V  N+    + PYE+KV
Sbjct: 761 YVFRNESIVPYSPYEVKV 778



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 170/729 (23%), Positives = 280/729 (38%), Gaps = 106/729 (14%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  +   +RI   N   +L I ++  +D G + C   N  G   
Sbjct: 339  CRASGKPKPSYRWLKNGAALVLEERIQIEN--GALTISNLSVTDSGMFQCIAENKHGLVY 396

Query: 115  SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
            S S +L V+A AP F+  P  + +       V+ +CK    P     W      + +   
Sbjct: 397  S-SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSWKKGDVSVQEHAR 455

Query: 172  NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
                K G   + I N+ K+D G Y C A N  G      ++ V+     IT AP +    
Sbjct: 456  ISLLKDG--GLKIANVTKADAGTYTCMAENQFGKANGTTHL-VVTEPTRITLAPSNMDVS 512

Query: 232  DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
             G++V+L C+V   P  ++   W  N             E  GG      +GDL I ++ 
Sbjct: 513  VGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGS----SSGDLMIRNIQ 568

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
               SG+Y C  +  + +   +  L V+        PE+ +V+           ++D + +
Sbjct: 569  LKHSGKYVCMVQTGVDSVSSAADLIVRGSP---GPPENVKVDE----------ITDTTAQ 615

Query: 339  LSIVWLRG----SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD------ 388
            LS  W  G    S  I +  + R   S  +  TVT   E+  G+       EL+      
Sbjct: 616  LS--WKEGKDNHSPVISYSIQARTPFSVGWQ-TVTTVPEVIDGKTHTATVVELNPWVEYE 672

Query: 389  --------------FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
                           + ++   T +   E P +          + V++W+PV  +   G 
Sbjct: 673  FRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGE 732

Query: 435  -------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
                   FR   V TW +           V + ES        VP S    +V  +N   
Sbjct: 733  GFGYVVAFRPLGVTTWIQTVVTSPDTPRYVFRNES-------IVPYSPYEVKVGVYNNKG 785

Query: 488  NGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSV 544
             GP S + +  + E  P    S + A  L SS   + W  +  +  NG L+GY+++Y + 
Sbjct: 786  EGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNG 845

Query: 545  KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
             G +      ++        TSA+L GL+ +  Y   +  Y  AG G  S  +       
Sbjct: 846  GGKEKSSSKVKVA----GNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSATVNATTKKT 901

Query: 601  -PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
             P + P NV    +T   ++++W  +  +E+ +    Y++F+R  +     N   VL+  
Sbjct: 902  PPSQPPGNVVWN-ATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQ----NNVQVLNTN 956

Query: 660  Q--SELVLANQPTFQPYEIKVVQTWTEKDGEGS----IRELIVNKGESTTTEVDKFVPAS 713
            +  +EL+L   P  + Y I+V  T    DG  S    I  +       +T+ +    P S
Sbjct: 957  KTSAELLL---PIKEDYIIEVKATTDGGDGTSSEQIRIPRITSMDARGSTSAISNVHPMS 1013

Query: 714  KNFARVLAF 722
                 VL F
Sbjct: 1014 SYLPIVLFF 1022



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 146/374 (39%), Gaps = 28/374 (7%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFSDQGSY 102
           V   ++K+ L C   G P P   W  +G  I+ + +   + N G  ++I      D G+Y
Sbjct: 39  VGSEDEKITLNCEARGNPSPHYRWQLNGSDIDTTMEHRYKLNGGNLVVINPNRNWDTGAY 98

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEI 157
            C  +N +G   S    L       F T     ++  E + V   C   G P    E   
Sbjct: 99  QCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLC---GPPPHSGELSY 155

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDVYVN 213
            W+ N  P S    + RR V      + I  +  SD GNY C  T+ +    V       
Sbjct: 156 AWIFNEYP-SFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSLVTNARVLGSPTPL 214

Query: 214 VL-------AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           VL        + P+I  + P+      G TV L C   G P P++NW  +       +  
Sbjct: 215 VLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIK 274

Query: 266 ILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
           + +  G L+I +    D+G Y C A N  G     G LT     H     +D E     S
Sbjct: 275 LRKFNGVLEIPNFQQEDAGSYECIAENSRGKNVARGRLTYYAKPHWVQLIKDVETAVEDS 334

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             + C A   P  K S  WL+    +  E     +Q  + +LT++  S  DSG + C A+
Sbjct: 335 LYWECRASGKP--KPSYRWLKNGAALVLEER---IQIENGALTISNLSVTDSGMFQCIAE 389

Query: 385 TELDFIEAQATLTV 398
            +   + + A L V
Sbjct: 390 NKHGLVYSSAELKV 403



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 124/300 (41%), Gaps = 32/300 (10%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +E+E +T  C+A G P P   W  NG  I     +  +  G
Sbjct: 22  LLQGPVFVKEPSNSIFPVGSEDEKITLNCEARGNPSPHYRWQLNGSDIDTTMEHRYKLNG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N + I   R  DTG Y C ATNSLG +         A+        +   +V +G+ VV
Sbjct: 82  GNLVVINPNRNWDTGAYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        WI N+     E    R+   ETG L I+ V  +D G YTC 
Sbjct: 142 LLC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCV 197

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
             + +  A+  GS   L ++    + +         PE      G +    C A+ +P  
Sbjct: 198 VTSLVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +++  W R S+ + F S+ +  + N   L +    + D+G Y C A+       A+  LT
Sbjct: 258 QIN--WRR-SDGLPFSSKIKLRKFNGV-LEIPNFQQEDAGSYECIAENSRGKNVARGRLT 313


>gi|350591368|ref|XP_001927514.4| PREDICTED: contactin-4 [Sus scrofa]
          Length = 807

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 189/727 (25%), Positives = 293/727 (40%), Gaps = 112/727 (15%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P  IW + DG P+    R  + N    L I + +  D G Y C   N 
Sbjct: 24  VKLECFALGNPVPTIIWRRADGKPMARKARRHKSN--GILEIPNFQQEDAGLYECVAENS 81

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P +  +   I+ A EE + +ECKA+G P+P   W+ NG P+   
Sbjct: 82  RGKNVARG-QLTFYAQPNWIQKINDIHVAIEENIFWECKANGRPKPTYRWLKNGDPLLS- 139

Query: 170 PPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
               R ++    G   ITI NL  SD G Y C A N  G ++    ++V+A  P+ +   
Sbjct: 140 ----RDRIHIEQGTLNITIVNL--SDAGMYQCVAENKHGVIFSSAELSVIAVGPDFSRTL 193

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADS 282
               T+   G  VV+ C+   +PKP   W   +  L    R TI E G L+I +V  +D+
Sbjct: 194 VKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDVLRENERITISEDGSLRIINVTKSDA 253

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   
Sbjct: 254 GSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLAIVFT 313

Query: 343 WLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           W      IDF+ +         Q +   L +       +G+Y C  QT +D + A A L 
Sbjct: 314 WSFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLI 373

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGE 449
           V+ P   P   T+ ++ D   A +SW P     SP ++      Y +Q  T         
Sbjct: 374 VRGPPGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFSVGWQAV 426

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTP 500
            ++ E+I   G++ T  V    P  +   R +A N    G PS         E +  VTP
Sbjct: 427 NTVPEII--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTP 484

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
             V G   S        S   + W  V  E  NG   GY + ++       G ++  L  
Sbjct: 485 ANVSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFR-----PYGKMIWMLTV 532

Query: 559 I--SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGR 611
           +  +D +    +   + P + + + +  Y   G+G  S           P K P ++  R
Sbjct: 533 LASADASRYVFRNESVRPFSPFEVKVGVYNNKGEGPFSPTTVVYSAEEEPSKPPASIFAR 592

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
             +  ++ + W +  E                                       N+   
Sbjct: 593 SLSATDIEVFWASPME--------------------------------------KNRGRI 614

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
           Q YE+K    W  +D E + R+ I   G  T+T++     ++     V A+N A  GP S
Sbjct: 615 QGYEVKY---WRHEDKEENARK-IRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPSS 670

Query: 732 EIISFVT 738
             ++  T
Sbjct: 671 ATVNVTT 677



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 146/584 (25%), Positives = 217/584 (37%), Gaps = 75/584 (12%)

Query: 132 PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKS 190
           PE +  A+  TV  EC A G P P I W   +GKP+++     RR      + I N ++ 
Sbjct: 13  PETVPTAKGTTVKLECFALGNPVPTIIWRRADGKPMAR---KARRHKSNGILEIPNFQQE 69

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A NS G       +   A  P   +   D +    + +   C+  G PKP  
Sbjct: 70  DAGLYECVAENSRGKNVARGQLTFYAQ-PNWIQKINDIHVAIEENIFWECKANGRPKPTY 128

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N   L       +E G L IT V  +D+G Y C A NK G    S  L+V     I
Sbjct: 129 RWLKNGDPLLSRDRIHIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSV-----I 183

Query: 311 TDQPEDYE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
              P+           V+ G      C   + P  K    W +G + +  E+E R   S 
Sbjct: 184 AVGPDFSRTLVKRVTLVKVGGEVVIECKPKASP--KPVYTWKKGRDVLR-ENE-RITISE 239

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVS 422
           D SL +   ++ D+G YTC A        +   L V+ P       + + V   +  V+ 
Sbjct: 240 DGSLRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLP 299

Query: 423 WNPVSPQSL----RGHFRGYKVQTWTEKD------GEGSIRELIVNKGE---------ST 463
                  SL       F G+ +    + D      G+ S  +L++   +           
Sbjct: 300 CQVTHDHSLAIVFTWSFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMV 359

Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYL 522
            T VDK   A+    R         GPP    +    E    T Q S    P   S   +
Sbjct: 360 QTSVDKLSAAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITM 410

Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
             ++   P      + + +Q+V           +P I D  T +A + GL P  +Y    
Sbjct: 411 YVIQARTP------FSVGWQAVN---------TVPEIIDGKTFTATVVGLNPWVEYEFRT 455

Query: 583 AGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
                 G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F 
Sbjct: 456 VAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFG 515

Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
           Y + +R +     W    +     S  V  N+    F P+E+KV
Sbjct: 516 YVVAFRPYGK-MIWMLTVLASADASRYVFRNESVRPFSPFEVKV 558



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 23/191 (12%)

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
           RG  +GY+V+ W  +D E + R+ I   G  T+T++     ++     V A+N A  GP 
Sbjct: 611 RGRIQGYEVKYWRHEDKEENARK-IRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPS 669

Query: 492 SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
           S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 670 SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNR 725

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
            +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P    
Sbjct: 726 QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIP--KI 773

Query: 606 DNVEGRGSTPN 616
            N   RG+ P+
Sbjct: 774 SNAYARGAGPS 784


>gi|341889115|gb|EGT45050.1| hypothetical protein CAEBREN_22128 [Caenorhabditis brenneri]
          Length = 1325

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 195/801 (24%), Positives = 331/801 (41%), Gaps = 108/801 (13%)

Query: 8   EYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIW 67
           +YK GN+  L  I      S  +  P +QYV +   +AL+  + +L C F G P P+  W
Sbjct: 229 DYKFGNQFSLQ-ITNNKRRSLQQMPPTEQYVNQSSPIALQGNQHKLHCFFSGYPAPKPRW 287

Query: 68  SKDGVPINPSDRISQG----NYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVL 123
             +G  I+  D  + G    +YGK+L+  +V     G Y C  +      +++++   V 
Sbjct: 288 FHNGREIS-EDSDAAGFRFESYGKTLVF-NVTQDKAGKYDCRFATQNDIDRTFNV--VVE 343

Query: 124 AAPYFTV-EPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
           AAPY+ +  P   N +E E VTF+C   G P P++ +  NG  ++ A  + R  +   R+
Sbjct: 344 AAPYWPLGPPPNTNTSEGENVTFDCTTYGKPTPKVTFYKNGVELA-AQKDDRYLIQGTRL 402

Query: 183 TIENLR-----KSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE--YTVDGKT 235
           TI +++     K D   Y C + N  G+++ + Y+N+LA  P++   P  E    V GK 
Sbjct: 403 TIYDVKKGTYGKGDNAVYQCKSENKHGWLWTNFYLNLLAFKPQLLIDPGKEEVEAVAGKK 462

Query: 236 VVLTCRVFGAPKPEVNW----IHNQK--ELTGGRYTILETGDLKITDVAFADSGEYTCFA 289
           V L C+ F +P   V W    I   K  ++    Y +   G L  ++V  A+ GEY C  
Sbjct: 463 VTLECKFFASPNAAVKWEAPMISGSKGNQIPADPYGV---GRLVFSEVTSAEEGEYECVG 519

Query: 290 RNKLGTAQGSGSLTVKEHTHITDQPEDYEVE-AGQSATFRCNAVSDPSLKLSIVWLRGSE 348
            NK G A G  +L V++ T +       EV  AG+     C A +D  L++   WL    
Sbjct: 520 TNKYGQASGVINLKVRKPTIVQPFARAEEVRMAGEEMRLPCEATADNQLEVKYEWLVDGI 579

Query: 349 PIDFESEPR-----FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-VPL 402
           P+    E R     +  ++D+SL +   ++ DS +Y C   T+LD +E +  +  + VP+
Sbjct: 580 PL---PEARVNSGHYRIADDHSLIIANPTQDDSAKYKCIVSTKLDQVEKEIKIQFKDVPV 636

Query: 403 EAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSI---------- 452
              S +      ++  A + +  + P S     + + VQ   + + EGS           
Sbjct: 637 PVHSAYVDKCDKNSLTAFIKFEHIEPDSTIAPVKEFWVQYQMDSETEGSQWRTHPVPTEA 696

Query: 453 -------RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-----TP 500
                   +L    G +T +      P  K   RVLA N   +   + +          P
Sbjct: 697 HPHDRVENQLRTTPGSATVS----LQPFGKYVFRVLARNSVGDSAATTVKGMCETPAKQP 752

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKWVKP---EQPNGVLMGYKIKYQSV-KGTKVGPLLE-- 554
           +  PG V +    P       ++W KP   E+ NG    Y +KY+ V +  + G   E  
Sbjct: 753 DKNPGEVSAKGTSP---ENLIVQW-KPMAREEWNGANFHYVVKYRPVDEDQRDGEWKEVA 808

Query: 555 -RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG------DGAESKYLFYVPFKNPDN 607
              P+    T        ++P   Y + +      G      +  E +    VP   P  
Sbjct: 809 VEDPFADRVTINLDDDKDVKPFQPYEVQVQAVNSEGRTNVVPETVEGRTGEGVPSSIPSG 868

Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI-FWRRHNTGEAWNQDD------VLDWRQ 660
           +     +   + ++W  +  +  N     Y+I +W      +    +D      +  W++
Sbjct: 869 LRVLEKSGTTVTLAWNGVDPLTANGNFTGYKITYWVDEADQDVDEPEDNEEEKRMFRWKR 928

Query: 661 SELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 720
           S              I++ +       +  +R+ IV    +T   +    PA+ N A + 
Sbjct: 929 S--------------IRMKR-------QSGVRKTIVFGPSATQGTITDLKPATLNHAYIQ 967

Query: 721 AFNGAYNGPPSEIISFVTPEG 741
             NGA+ G  S+ I F T EG
Sbjct: 968 VTNGAHEGAASDTIDFQTDEG 988



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 96/225 (42%), Gaps = 36/225 (16%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK---------DGE- 449
            VP   PS   +++        ++WN V P +  G+F GYK+  W ++         D E 
Sbjct: 861  VPSSIPSGLRVLEK-SGTTVTLAWNGVDPLTANGNFTGYKITYWVDEADQDVDEPEDNEE 919

Query: 450  ----------------GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
                              +R+ IV    +T   +    PA+ N A +   NGA+ G  S+
Sbjct: 920  EKRMFRWKRSIRMKRQSGVRKTIVFGPSATQGTITDLKPATLNHAYIQVTNGAHEGAASD 979

Query: 494  IISFVTPEGVPGTVQSLEAIPLG------SSAFYLKWVKPEQPNGVLMGYKIKY-QSVKG 546
             I F T EGVP  V+S  A P+            L W KP Q NG L  Y+++Y ++  G
Sbjct: 980  TIDFQTDEGVPSPVRSFRAHPMNPLETSEKGVVNLVWKKPRQSNGKLARYEVEYCKTQNG 1039

Query: 547  TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             +V     R     DP     ++ GLE  T YR  +  +T AG+G
Sbjct: 1040 KQVEKTCPRQQI--DPDAKEVRITGLEHETPYRFIMRAHTSAGEG 1082



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 75/367 (20%), Positives = 126/367 (34%), Gaps = 37/367 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPS---DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           + C   G P P   W KDG    PS   +++ Q     SL+   ++ SD G Y CE  N 
Sbjct: 65  IHCFANGNPRPTYRWKKDGKSFLPSMFPEKVVQKPGEGSLVFSRLDESDAGLYQCEAENS 124

Query: 110 VGEAKSYSIDLSVLAAPYFT-VEPEFINAAEEETVTFECK-ASGLPEPEIHWVHNGKPIS 167
            G A    + +      +F   EPE +     +     C   +  P   ++W+  GK   
Sbjct: 125 NGTAVDRPVRVQETWIRHFKPAEPEVVVVEVGDPYQRNCSPPASNPNARVYWILMGKEPG 184

Query: 168 QAPPNPRRKVGPN-------RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA---- 216
                    +  N           E   KSD   Y C A N     YK  + N  +    
Sbjct: 185 HFETISSSHISSNEQGTLFFHYVNETDLKSDR-YYTCTAENIELKDYK--FGNQFSLQIT 241

Query: 217 --HAPEITEAPKDEYTVD--------GKTVVLTCRVFGAPKPEVNWIHNQKELT----GG 262
                 + + P  E  V+        G    L C   G P P+  W HN +E++      
Sbjct: 242 NNKRRSLQQMPPTEQYVNQSSPIALQGNQHKLHCFFSGYPAPKPRWFHNGREISEDSDAA 301

Query: 263 RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAG 322
            +     G   + +V    +G+Y C    +    +    +           P +     G
Sbjct: 302 GFRFESYGKTLVFNVTQDKAGKYDCRFATQNDIDRTFNVVVEAAPYWPLGPPPNTNTSEG 361

Query: 323 QSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL---DSGQY 379
           ++ TF C     P+ K++  +  G E    + +   +Q    ++   K       D+  Y
Sbjct: 362 ENVTFDCTTYGKPTPKVTF-YKNGVELAAQKDDRYLIQGTRLTIYDVKKGTYGKGDNAVY 420

Query: 380 TCRAQTE 386
            C+++ +
Sbjct: 421 QCKSENK 427


>gi|354483119|ref|XP_003503742.1| PREDICTED: neural cell adhesion molecule L1-like protein
           [Cricetulus griseus]
          Length = 1206

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 181/728 (24%), Positives = 299/728 (41%), Gaps = 72/728 (9%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P  Q  +      L+ + + L C   G P PQ  WSK G  + P  R ++ NYGK+L I+
Sbjct: 237 PPAQRGSSSTMTVLKGETLLLECFAEGLPTPQVEWSKPGSEL-PKGRETKENYGKTLKIE 295

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGL 152
           ++ + D+G+Y C  SN +G+A S+   + V   P +  +P+    +   +    C+A G 
Sbjct: 296 NISYHDKGNYRCTASNLLGKA-SHDFHIIVQEPPRWKKKPQSAVYSTGSSGILLCEAEGE 354

Query: 153 PEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYV 212
           P+P I W  NG PI   P  P   +    I+  NL+ + T  Y C A+N  G +     +
Sbjct: 355 PQPTIKWRVNGFPIENHP-FPGDVMFTREISFTNLQPNHTAVYQCEASNIHGTILASANI 413

Query: 213 NVLAHAPEITEAPKDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILET 269
           +V+   P I    ++ Y TV G +  L C  F +PK  V W        L G RY   E 
Sbjct: 414 DVVDVVPLIKTKNEENYATVLGYSAFLHCEYFASPKATVIWEVADEAHPLEGSRYHTHEN 473

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I      D+G Y+C+  N +G A  + +L ++  T +   P++  +         C
Sbjct: 474 GTLEIYRTTEEDAGSYSCWVDNAMGKAVITANLDIRNATKLKVSPKNPRIPKSHMLELHC 533

Query: 330 NAVSDPSLK--LSIVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
            +  D  LK  L + W +  E  D   +E   +  +  +LT++  S  D G Y+C AQT 
Sbjct: 534 ESQCDSHLKHTLKLSWSKDGETFDINGTEDGRIVIDGANLTISNISVEDQGIYSCSAQTA 593

Query: 387 LDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
           LD I  +  +TV + +  P    L+     +   +SW   +      +   Y ++    +
Sbjct: 594 LDSISEKTQVTV-LGVPDPPGSLLLSERQNRSVRLSWE--AGDDHNSNISEYIIEFEGNR 650

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN---GAYNGPPSEIISFVTPEGV 503
           +  G  +EL    GE T   V    P  +   RV+A N    +Y   PS+     TP   
Sbjct: 651 EEPGKWQELTRIPGEETEA-VLSLAPYVRYQFRVIAVNEVGRSYPSQPSD--HHETPPAA 707

Query: 504 PG-TVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560
           P    Q++           +KW  +K  + NG  + Y++ ++     +            
Sbjct: 708 PDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVSWKPQGAPE---------EWE 758

Query: 561 DPTTTSAKLAGLEPST--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN---VEGRGST 614
           + T T+  L  + P+    Y + +    + G G E + +  Y     P     + G    
Sbjct: 759 EETVTNHTLRVMTPTVYAPYDVQVQAINQLGSGPEPQPVTLYSGEDYPSTAPVIHGVDVM 818

Query: 615 PNNLV-ISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
            + LV ++W+++P+   +     Y+I W        W    +LD R             P
Sbjct: 819 NSTLVKVTWSSIPKETVHGLLRGYQINW--------WKTKSLLDGRT-----------HP 859

Query: 674 YEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 733
            E+ +++                  G+  +  V      S+    VLA+N    GP SE 
Sbjct: 860 KEVNILRF----------------SGQRNSGMVPSLDAFSEYHLTVLAYNSKGAGPESEA 903

Query: 734 ISFVTPEG 741
             F TPEG
Sbjct: 904 YIFQTPEG 911



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 8/187 (4%)

Query: 411 IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK---DGEGSIRELIVNK--GESTTT 465
           + V+++    V+W+ +  +++ G  RGY++  W  K   DG    +E+ + +  G+  + 
Sbjct: 815 VDVMNSTLVKVTWSSIPKETVHGLLRGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSG 874

Query: 466 EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWV 525
            V      S+    VLA+N    GP SE   F TPEGVP     L+ I +      L W 
Sbjct: 875 MVPSLDAFSEYHLTVLAYNSKGAGPESEAYIFQTPEGVPEQPSFLKVIKVDKDTATLSWG 934

Query: 526 KPEQPNGVLMGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAG 584
            P++ NG L GY ++YQ +  T ++G L E    ++ P+ +S  L+ L  +TKY+ +L  
Sbjct: 935 LPKKLNGNLTGYLLQYQIINDTYEIGELNEI--NVTTPSKSSWHLSNLNATTKYKFYLKA 992

Query: 585 YTKAGDG 591
            T  G G
Sbjct: 993 CTSKGCG 999



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 156/381 (40%), Gaps = 32/381 (8%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTC 104
           ++  ++ C   G P P+  W+KD    + SD   I   N G   I      S  QG Y C
Sbjct: 47  DENFQIECEAKGNPEPKFSWTKDDKHFDLSDPRIIVSNNSGTFKIPNEGHISHFQGKYRC 106

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH- 161
             SN +G A S  I+  V   P F  E  E ++  E +++   C    GLP   I+W++ 
Sbjct: 107 FASNRLGTAISEEIEFIVPGVPKFPKEKIEPMDVEEGDSIVLPCNPPKGLPPLHIYWMNI 166

Query: 162 NGKPISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-NSLGYVYKDVYVNVLAHAP 219
             + I Q       + G   +   N+ + D+ N Y C A    L  + + + + +  ++ 
Sbjct: 167 ELEHIEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPKLRTIVQKMPMKLTVNSS 224

Query: 220 EITEAPKDEY--------------TVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
            + +  K +                + G+T++L C   G P P+V W     EL  GR T
Sbjct: 225 NLIKQRKPKLLLPPAQRGSSSTMTVLKGETLLLECFAEGLPTPQVEWSKPGSELPKGRET 284

Query: 266 ILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
               G  LKI ++++ D G Y C A N LG A     + V+E      +P+      G S
Sbjct: 285 KENYGKTLKIENISYHDKGNYRCTASNLLGKASHDFHIIVQEPPRWKKKPQSAVYSTGSS 344

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQ-SNDYSLTVTKSSELDSGQYTCRA 383
               C A  +P  + +I W     PI+    P  V  + + S T  + +   +  Y C A
Sbjct: 345 GILLCEAEGEP--QPTIKWRVNGFPIENHPFPGDVMFTREISFTNLQPNH--TAVYQCEA 400

Query: 384 QTELDFIEAQATLTV--QVPL 402
                 I A A + V   VPL
Sbjct: 401 SNIHGTILASANIDVVDVVPL 421



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 77/182 (42%), Gaps = 12/182 (6%)

Query: 118 IDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRK 176
           I LSV   P  T +    +    +E    EC+A G PEP+  W  + K    +  +PR  
Sbjct: 24  IPLSVQQVPTITKQSHVQVAFPFDENFQIECEAKGNPEPKFSWTKDDKHFDLS--DPRII 81

Query: 177 VGPN----RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV- 231
           V  N    +I  E       G Y C A+N LG    +    ++   P+  +   +   V 
Sbjct: 82  VSNNSGTFKIPNEGHISHFQGKYRCFASNRLGTAISEEIEFIVPGVPKFPKEKIEPMDVE 141

Query: 232 DGKTVVLTCR-VFGAPKPEVNWIHNQKELT--GGRYTILETGDLKITDVAFADS-GEYTC 287
           +G ++VL C    G P   + W++ + E      R  + + GDL   +V   DS  +Y C
Sbjct: 142 EGDSIVLPCNPPKGLPPLHIYWMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCC 201

Query: 288 FA 289
           FA
Sbjct: 202 FA 203


>gi|344306192|ref|XP_003421772.1| PREDICTED: LOW QUALITY PROTEIN: neural cell adhesion molecule
           L1-like [Loxodonta africana]
          Length = 1205

 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 139/473 (29%), Positives = 216/473 (45%), Gaps = 22/473 (4%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L + +V   D G Y 
Sbjct: 252 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLVNVGEEDDGEYR 310

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 311 CLAENPLGTAR-HAYYVTVEAAPYWLHKPQSQLYGPGETARLDCQVQGRPQPEVTWRING 369

Query: 164 KPISQAPPNPR-RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
            P+++   + + R    + + + N++ SDT    C A N  G +  + Y+ V+    +I 
Sbjct: 370 IPLTELSEDQKYRTQQGDALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPTKIL 429

Query: 223 EAPKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAF 279
                 Y  V+G T  L  + FGAP P + W+  +    L   R+     G L I D+  
Sbjct: 430 TPDNQTYLAVEGSTAYLLFKAFGAPVPSIQWLDEEGATVLQDERFFPYANGTLGIRDLQA 489

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
            D+  Y C A N         +L VK+ T IT  P+    + G   TF C A  DPSLK 
Sbjct: 490 NDTARYFCQATNDQNNVTIVANLQVKDATRITQGPQSAIEKKGSRVTFTCQASFDPSLKH 549

Query: 340 SIVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           SI W R    +    +S+  F++  D  L +      D G Y+C A T+LD +E++A L 
Sbjct: 550 SITWRRDGRDLQELGDSDKYFIE--DSRLIIQSLDYSDQGNYSCVASTKLDVVESRAQLL 607

Query: 398 V-----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSI 452
           V      VP    S+  L++    +   +SW+P   +        Y ++   +K      
Sbjct: 608 VVGSPGPVPQLELSDRHLLKQCQVR---LSWSPA--EDHNAPIEKYDIEFEDKKMEPEKW 662

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVP 504
             L    G  T+T + K  P      RV A N    G PS    + +TPE  P
Sbjct: 663 YSLGKVPGNQTSTTL-KLSPYIHYTFRVTAINKYGPGEPSPASETVLTPEAAP 714



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 169/661 (25%), Positives = 263/661 (39%), Gaps = 82/661 (12%)

Query: 63  PQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE---AKSYSI 118
           P+  W    +  I   +R++ G  G       +   +   Y C  ++ +G     +   I
Sbjct: 166 PRIYWMNSKILHIKQDERVTMGQDGNLYFANVLTTDNHSDYICH-AHFLGARTIIQKEPI 224

Query: 119 DLSVLAAP----------YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQ 168
           DL V A            + T     + A + + +  EC A G P P I W+    P+  
Sbjct: 225 DLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLRPSGPM-- 282

Query: 169 APPNPRRKVGPNRITIE--NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
             P  R     +  T++  N+ + D G Y C A N LG      YV V A AP     P+
Sbjct: 283 --PADRVTYQNHNKTLQLVNVGEEDDGEYRCLAENPLGTARHAYYVTVEA-APYWLHKPQ 339

Query: 227 DEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT----GGRYTILETGDLKITDVAFADS 282
            +    G+T  L C+V G P+PEV W  N   LT      +Y   +   L +++V  +D+
Sbjct: 340 SQLYGPGETARLDCQVQGRPQPEVTWRINGIPLTELSEDQKYRTQQGDALILSNVQPSDT 399

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
               C ARN+ G    +  + V +     +T   + Y    G +A     A   P    S
Sbjct: 400 MVTQCEARNRHGLLLANAYIYVVQLPTKILTPDNQTYLAVEGSTAYLLFKAFGAPVP--S 457

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I WL        + E RF    + +L +      D+ +Y C+A  + + +   A L    
Sbjct: 458 IQWLDEEGATVLQDE-RFFPYANGTLGIRDLQANDTARYFCQATNDQNNVTIVANL---- 512

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
                      QV DA +  ++  P S    +G    +  Q   +   + SI      + 
Sbjct: 513 -----------QVKDATR--ITQGPQSAIEKKGSRVTFTCQASFDPSLKHSITWRRDGRD 559

Query: 461 ESTTTEVDK-FVPASKNFARVLAFN--GAYNGPPSEIISFVTPE------GVPGTVQSLE 511
                + DK F+  S+   + L ++  G Y+   S  +  V         G PG V  LE
Sbjct: 560 LQELGDSDKYFIEDSRLIIQSLDYSDQGNYSCVASTKLDVVESRAQLLVVGSPGPVPQLE 619

Query: 512 AIP---LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP----LLERLPYISDPTT 564
                 L      L W   E  N  +  Y I+++     K+ P     L ++P   + T+
Sbjct: 620 LSDRHLLKQCQVRLSWSPAEDHNAPIEKYDIEFED---KKMEPEKWYSLGKVP--GNQTS 674

Query: 565 TSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV------PFKNPDNVEGRGSTPNNL 618
           T+ KL+   P   Y   +    K G G  S     V      P KNP +V G G+  NN+
Sbjct: 675 TTLKLS---PYIHYTFRVTAINKYGPGEPSPASETVLTPEAAPEKNPVDVRGEGNETNNM 731

Query: 619 VISWTAMPEIEHNAPHFKYRIFWRRHNT-GEAWNQDDVLDWRQSELVLANQPTFQPYEIK 677
           VI+W  +  ++ NAP  +YR+ WR     G AW Q+ +L   +  LV+ N  TF PYEI+
Sbjct: 732 VITWKPLKWMDWNAPQVQYRVQWRPQGVRGAAW-QEQILS--KPFLVVTNTSTFVPYEIR 788

Query: 678 V 678
           V
Sbjct: 789 V 789



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 167/681 (24%), Positives = 260/681 (38%), Gaps = 62/681 (9%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPIN--PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN-- 108
            L C   G P P+  W  +G+P+     D+  +   G +LI+ +V+ SD     CE  N  
Sbjct: 351  LDCQVQGRPQPEVTWRINGIPLTELSEDQKYRTQQGDALILSNVQPSDTMVTQCEARNRH 410

Query: 109  GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGKPIS 167
            G+  A +Y I +  L     T + +   A E  T     KA G P P I W+   G  + 
Sbjct: 411  GLLLANAY-IYVVQLPTKILTPDNQTYLAVEGSTAYLLFKAFGAPVPSIQWLDEEGATVL 469

Query: 168  QAPPNPRRKVGP---NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPEITE 223
            Q       +  P     + I +L+ +DT  Y C ATN    V   +  N+ +  A  IT+
Sbjct: 470  Q-----DERFFPYANGTLGIRDLQANDTARYFCQATNDQNNV--TIVANLQVKDATRITQ 522

Query: 224  APKDEYTVDGKTVVLTCRVFGAP--KPEVNWIHNQK---ELTGGRYTILETGDLKITDVA 278
             P+      G  V  TC+    P  K  + W  + +   EL       +E   L I  + 
Sbjct: 523  GPQSAIEKKGSRVTFTCQASFDPSLKHSITWRRDGRDLQELGDSDKYFIEDSRLIIQSLD 582

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            ++D G Y+C A  KL   +    L V        Q E  +    +    R +        
Sbjct: 583  YSDQGNYSCVASTKLDVVESRAQLLVVGSPGPVPQLELSDRHLLKQCQVRLSWSPAEDHN 642

Query: 339  LSIVWLRGSEPIDFESEPRFVQSND-YSLTVTKSSELDSG-------QYTCRAQTELDFI 390
              I      E  D E E + ++    YSL     ++  +         YT R      + 
Sbjct: 643  API------EKYDIEFEDKKMEPEKWYSLGKVPGNQTSTTLKLSPYIHYTFRVTAINKYG 696

Query: 391  EAQ---ATLTVQVPLEAPSNFTLI---QVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWT 444
              +   A+ TV  P  AP    +    +  +    V++W P+           Y+VQ W 
Sbjct: 697  PGEPSPASETVLTPEAAPEKNPVDVRGEGNETNNMVITWKPLKWMDWNAPQVQYRVQ-WR 755

Query: 445  EKDGEGSI-RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGV 503
             +   G+  +E I++K     T    FVP      RV A N    GP   +    + E  
Sbjct: 756  PQGVRGAAWQEQILSKPFLVVTNTSTFVPYE---IRVQAVNSQGKGPEPHVTIGYSGEDF 812

Query: 504  PGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVKGTKVGPLLERLPY 558
            P     L+ +  L SSA  +KW  V P Q  G L GY + Y  +  +       + R   
Sbjct: 813  PQASPQLDGVKILNSSAVLVKWWPVDPAQVKGHLRGYNVTYWWEGSQRKHSKRHVHRGHV 872

Query: 559  ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF---KNPDNVEGRGSTP 615
            +    TTSA L+GL P + Y + +  +   G G  S+  F  P     +P+ +     + 
Sbjct: 873  VVPANTTSAILSGLRPYSSYHLEVQAFNGRGAGPASEITFSTPEGVPGHPEALHLECQSD 932

Query: 616  NNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP-- 673
             +L++ W   P + HN     Y + +  H   E   +    D R  EL + N     P  
Sbjct: 933  TSLLLHW--QPPLSHNGVLTGYVLSY--HPLDEGSKEQLSFDLRNPELRMHNLTNLDPHL 988

Query: 674  -YEIKVVQTWTEKDGEGSIRE 693
             Y  ++  T  +  GE  +RE
Sbjct: 989  RYRFQLQATTKKGPGEAIVRE 1009



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 94/403 (23%), Positives = 166/403 (41%), Gaps = 36/403 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRI-----SQGNYGKSLIIKHVE 95
           ++ V      + L C   G P  Q  W++DG+   P + +        + G      +  
Sbjct: 43  RRLVVFPTDDISLKCEASGKPEVQFRWTRDGIHFKPEEELGVTVHQAAHSGSFTFTGNNN 102

Query: 96  FSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKAS 150
           F+   QG+Y C  SN +G A S+ I L    AP +   TV+P  +   E   +      S
Sbjct: 103 FAQRFQGTYRCFASNKLGTAMSHEIQLVAEGAPKWSKETVKPVEVEEGEPVVLPCHPPLS 162

Query: 151 GLPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNATNSLG---Y 205
             P P I+W+++   I     + R  +G +  +   N+  +D   +Y C+A + LG    
Sbjct: 163 AEP-PRIYWMNSK--ILHIKQDERVTMGQDGNLYFANVLTTDNHSDYICHA-HFLGARTI 218

Query: 206 VYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIHN 255
           + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+  
Sbjct: 219 IQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLRP 278

Query: 256 QKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
              +   R T       L++ +V   D GEY C A N LGTA+ +  +TV+   +   +P
Sbjct: 279 SGPMPADRVTYQNHNKTLQLVNVGEEDDGEYRCLAENPLGTARHAYYVTVEAAPYWLHKP 338

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPI-DFESEPRFVQSNDYSLTVTKSSE 373
           +      G++A   C     P  +  + W     P+ +   + ++      +L ++    
Sbjct: 339 QSQLYGPGETARLDCQVQGRP--QPEVTWRINGIPLTELSEDQKYRTQQGDALILSNVQP 396

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP--LEAPSNFTLIQV 413
            D+    C A+     + A A +  VQ+P  +  P N T + V
Sbjct: 397 SDTMVTQCEARNRHGLLLANAYIYVVQLPTKILTPDNQTYLAV 439


>gi|41323984|gb|AAS00058.1| contactin [Carassius auratus]
          Length = 1029

 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 189/740 (25%), Positives = 294/740 (39%), Gaps = 102/740 (13%)

Query: 30  RHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSL 89
           +  P    V   K  AL ++ + L C   G PLP   W K    + P+  +S    G  L
Sbjct: 240 KRYPADIRVKFPKTYALVHQNITLECFALGNPLPHIRWRKLDADLPPNYEVSMN--GALL 297

Query: 90  IIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFE 146
            + +V++ D+GSY CE  N  G    Y   L V  AP +    E IN  E++    +T  
Sbjct: 298 HLINVQYEDEGSYECETLNVKG-MDWYRQWLYVEGAPEWA---EHINDTEKDVGSELTLR 353

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV 206
           C A G P P I W+ +G              G   +   +L   D+G Y C A N  G +
Sbjct: 354 CVAVGKPLPWIRWLKDG-----------YSYGKGELKFSSLTFEDSGMYQCVAENEWGTI 402

Query: 207 YKDVYVNVLAHAPEITEAPKDEYTVDGKT--VVLTCRVFGAPKPEVNWIHNQKELT-GGR 263
           Y    + V++ AP     P  +  +  +   VV+ C+   APKP+  W    + LT   R
Sbjct: 403 YASAELRVVSCAPTFIYNPVKKVLLGAEKGRVVIECKPRAAPKPKFIWKRGSELLTNSSR 462

Query: 264 YTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQ 323
             I + G L+I +V+ +D G YTC+A N  G +  +G+LT+ E T IT  P D E   G 
Sbjct: 463 MLIWDDGSLEILNVSKSDEGSYTCYAENDRGKSNSTGTLTITEATKITVAPSDTEAVVGD 522

Query: 324 SATFRCNAVSDPSLKLSIVWLRGSEPIDFES-----EPRFVQSNDYSLTVTKSSELDSGQ 378
           +A  +C+A  DPSL ++ +W   S  I+F +     E      N   L +       +G 
Sbjct: 523 TAILQCSASFDPSLDITFIWTVDSYVINFYTDFEHYELLMGHENRGDLLIKNIQVRHAGH 582

Query: 379 YTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQ--SLRGH-- 434
           Y+C AQT +D   A+A ++V+  L  P     ++ I      + W+  S    SL  H  
Sbjct: 583 YSCTAQTIVDNATAEADVSVR-GLPGPPGGVRVEEIGDTSVKLRWSLGSDHGSSLIQHVV 641

Query: 435 ----FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLA---FNGAY 487
               F     + W       S   + ++    + T +D + P  +   RV A   F    
Sbjct: 642 QTRDFYALDPEDWK----TASTSPVFLDGSAESATVLDLY-PWMQYEFRVHAINEFGAGE 696

Query: 488 NGPPSEIISFVTPEGVPGTVQSLEAIPLG-SSAFYLKW--VKPEQPNGVLMGYKIKYQSV 544
           N  PS  I   T +  P    S     +G S    + W  VKP+   G   GY + ++  
Sbjct: 697 NSRPS--IKIKTWDARPTVAPSDVIGQVGISGELIVTWTPVKPQFFFGKKFGYTVAFKQH 754

Query: 545 KGTKVGPLLERLPYISDPTTTSAKLA-GLEPSTKYRIHLAGYTKAGDGAESKY-LFY--- 599
           +  +      +   + DP T        + P T+ ++ ++ Y   G+G  S   + Y   
Sbjct: 755 EDYEW-----KWSTVEDPETRRYIYKESMTPDTEIQVKVSTYNNKGEGPSSLISVVYSPR 809

Query: 600 -VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDW 658
             P + P +V  R  T    ++ W  + +   N        +WR+++             
Sbjct: 810 LAPTEAPLDVYARQVTSTEALVWWLPVYQAPPNWVDGYQIRYWRKYD------------- 856

Query: 659 RQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR 718
                                      D E +   +IV++     T ++   P S     
Sbjct: 857 ---------------------------DNEAAASRVIVHR-TINQTRLENMRPDSHYLIE 888

Query: 719 VLAFNGAYNGPPSEIISFVT 738
           V AFNGA  GPPSE     T
Sbjct: 889 VRAFNGAGLGPPSEHCEMFT 908



 Score = 47.4 bits (111), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 84/200 (42%), Gaps = 18/200 (9%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE-KDGEGSIRELIVNK 459
           P EAP +    QV  + +A+V W PV  Q+      GY+++ W +  D E +   +IV++
Sbjct: 812 PTEAPLDVYARQVT-STEALVWWLPVY-QAPPNWVDGYQIRYWRKYDDNEAAASRVIVHR 869

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPG-TVQSLEAIPLGSS 518
                T ++   P S     V AFNGA  GPPSE     T    P   ++  + +     
Sbjct: 870 -TINQTRLENMRPDSHYLIEVRAFNGAGLGPPSEHCEMFTRRPPPSRLLRVYKYVSFNRK 928

Query: 519 AFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPST 576
             YL W  +        + GYKI ++  +G + G L          TT    +    P T
Sbjct: 929 WLYLYWDHIYNYWNESYVEGYKILFRK-EGERYGKLY---------TTGRHYIDFPMPET 978

Query: 577 -KYRIHLAGYTKAGDGAESK 595
             Y I +    + GDG  S+
Sbjct: 979 GDYVIEVRARCEGGDGPISQ 998



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 100/282 (35%), Gaps = 33/282 (11%)

Query: 125 APYFTVEPEFINAAE---EETVTFECKASGLPEPEIHWVHNGKPIS--QAPPNPRRKVGP 179
            P F  EP     AE   E  ++  C+A   P   I W  N   I   + P      VG 
Sbjct: 39  GPIFEEEPLDTVYAEDSPENKISMNCRARANPPALIKWWLNNWEIKLMEQPDEHFSLVGG 98

Query: 180 NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE----YTVDGKT 235
           N +     +    G Y C A N  G V          +   + + P DE    +  +G+ 
Sbjct: 99  NLVITNPDKGKHAGKYVCVAKNVYGTVISKEATVKFGY---LNQFPTDEREPVHVKEGQG 155

Query: 236 VVLTCRVFGAPKPEV--NWIHNQKE----LTGGRYTILETGDLKITDVAFADSGEYTCFA 289
            VL C        EV   WI+N           R+    TG++ I  V  +D G Y+CF 
Sbjct: 156 AVLLCSPPSRYPSEVLFRWIYNDFPNFIIPDQRRFVSQTTGNMYIAKVEASDVGNYSCFV 215

Query: 290 RN-KLGTAQGSGSLTV--KEHTHITDQPEDYEVE-------AGQSATFRCNAVSDPSLKL 339
            +  +G +  S  + +  +    +   P D  V+         Q+ T  C A+ +P   +
Sbjct: 216 SSPTIGKSVFSMPIPLLPQIEKEVKRYPADIRVKFPKTYALVHQNITLECFALGNPLPHI 275

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTC 381
               L    P ++E     V  N   L +      D G Y C
Sbjct: 276 RWRKLDADLPPNYE-----VSMNGALLHLINVQYEDEGSYEC 312


>gi|327271269|ref|XP_003220410.1| PREDICTED: contactin-2-like [Anolis carolinensis]
          Length = 1036

 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 171/637 (26%), Positives = 273/637 (42%), Gaps = 58/637 (9%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLI-IKHVEFSDQGSY 102
           AL  + V L C   G P+PQ  W K DG       + S+    + L+  K V F D+G+Y
Sbjct: 246 ALAGQLVSLECFAFGNPVPQIRWRKLDG------GQSSRWITTEPLLEFKEVSFEDEGTY 299

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            CE  N  G+  +Y   + + A P +        A     + + C A+G P P I W+ N
Sbjct: 300 ECEAENIQGK-DTYRGRIIIQAQPEWLKVISDKEADIGADLHWSCAAAGKPRPTIRWLRN 358

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           G+P++      R +V    + I  L   D+G Y C   N  G  Y    + V A AP+  
Sbjct: 359 GRPLTS---QNRIEVNGGDLRIFKLTMDDSGMYQCVGENKHGSTYASAELYVQAFAPDFR 415

Query: 223 EAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
             P         G  +++ C+   APK  + W    + L  G R TI  +G L I +++ 
Sbjct: 416 LNPVRRLIPAARGGEIIIHCQPKAAPKANIIWTKGTELLNNGSRITITPSGTLIIRNISK 475

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           +D G+YTCFA N +G A  +G+L+V++ T IT  P   ++  G++ T +C+A  DP++ L
Sbjct: 476 SDEGKYTCFAENFMGKANSTGTLSVRDATKITLAPSSADINVGENITLKCHASHDPTMDL 535

Query: 340 SIVWLRGSEPIDF-ESEPRF----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +  W      ID  +SE  +     + N   L V  +    +G+YTC AQT +D     A
Sbjct: 536 TFTWCLDDLLIDISKSEGHYKRASTKENIGDLMVLNAQLKHAGRYTCTAQTVVDSASESA 595

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHFRGYKVQTWTEKD 447
           TL V+ P   P    +  + D     +SW       +P++   ++   R      W +  
Sbjct: 596 TLVVRGPPGPPGGLVVTDIKDT-TVQLSWSRGFDNHSPIAKYVIQ--VRTPIFSHWKQAR 652

Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGT 506
              +  E     G S T +V   +P      RVLA N    G PS   + + T E  P  
Sbjct: 653 TNPANIE-----GNSETAQVGNLIPWMDYEFRVLASNILGVGEPSMPSAKIRTKEAAPTV 707

Query: 507 VQSLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKV---GPLL--ERLPY 558
             S      G+     + W  ++ E  NG   GY + ++  +GT+V     +L  E L Y
Sbjct: 708 APSGLNGGGGAPGELIINWTPMQREYQNGDGFGYNLTFRK-EGTQVWKTATVLGAESLHY 766

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEGRGS 613
           +        +   + P T + + +  + K G+G ES           P   P N+     
Sbjct: 767 V-------YRNESIAPYTPFEVKIKAFNKKGEGPESLVSIVHSAEEEPRVAPSNITVNSV 819

Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRI-FWRRHNTGEA 649
               + I+W ++ + + N     Y I +W+  +  EA
Sbjct: 820 MATEMDITWNSVEDHDMNGVLLGYEIRYWKHGDKEEA 856



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 151/381 (39%), Gaps = 52/381 (13%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPI----NPSDRISQGNYGKSLIIKH-VEFSDQGSYT 103
           +++ L C    +P     W  +G  I    N   R++ GN    L+I + V+  D G Y 
Sbjct: 50  EQILLTCQARASPPATYRWKLNGTEIKIETNSRYRLNGGN----LVISNPVKLKDAGFYQ 105

Query: 104 CEVSNGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECK-ASGLPEPEIHWVH 161
           C  SN VG   S    +       + T E + +   E   V F C      P  E  W  
Sbjct: 106 CVASNSVGTVVSREAYVRFGFLQEFSTEERDPVRGTEGWGVMFTCSPPPHFPGIEYRWFV 165

Query: 162 NGKP----------ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVY 211
           N  P          ISQA  N         + I     SD GNY C AT  +    K V+
Sbjct: 166 NDFPNFISTDRRRFISQATGN---------LYIAKTEASDLGNYSCFATGHIDSFKKSVF 216

Query: 212 V----------NVLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT 260
                      +   +AP I  + P D + + G+ V L C  FG P P++ W    ++L 
Sbjct: 217 STSSQLSLVREDSRPYAPTIKAKFPSDTFALAGQLVSLECFAFGNPVPQIRW----RKLD 272

Query: 261 GGRYTILETGD--LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYE 318
           GG+ +   T +  L+  +V+F D G Y C A N  G     G + ++          D E
Sbjct: 273 GGQSSRWITTEPLLEFKEVSFEDEGTYECEAENIQGKDTYRGRIIIQAQPEWLKVISDKE 332

Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQ 378
            + G    + C A   P  + +I WLR   P+  ++    ++ N   L + K +  DSG 
Sbjct: 333 ADIGADLHWSCAAAGKP--RPTIRWLRNGRPLTSQNR---IEVNGGDLRIFKLTMDDSGM 387

Query: 379 YTCRAQTELDFIEAQATLTVQ 399
           Y C  + +     A A L VQ
Sbjct: 388 YQCVGENKHGSTYASAELYVQ 408



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 148/596 (24%), Positives = 221/596 (37%), Gaps = 98/596 (16%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P+   +RI     G  L I  +   D G Y C   N  G   
Sbjct: 343 CAAAGKPRPTIRWLRNGRPLTSQNRIEVN--GGDLRIFKLTMDDSGMYQCVGENKHGSTY 400

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHW------VHNGKP 165
           + S +L V A AP F + P    I AA    +   C+    P+  I W      ++NG  
Sbjct: 401 A-SAELYVQAFAPDFRLNPVRRLIPAARGGEIIIHCQPKAAPKANIIWTKGTELLNNGSR 459

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           I+  P           + I N+ KSD G Y C A N +G       ++V   A +IT AP
Sbjct: 460 ITITPSG--------TLIIRNISKSDEGKYTCFAENFMGKANSTGTLSV-RDATKITLAP 510

Query: 226 KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL------TGGRYTILET----GDLKIT 275
                  G+ + L C     P  ++ +     +L      + G Y    T    GDL + 
Sbjct: 511 SSADINVGENITLKCHASHDPTMDLTFTWCLDDLLIDISKSEGHYKRASTKENIGDLMVL 570

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH-----ITDQPEDYEVEAGQSATFRCN 330
           +     +G YTC A+  + +A  S +L V+         +    +D  V+   S  F  +
Sbjct: 571 NAQLKHAGRYTCTAQTVVDSASESATLVVRGPPGPPGGLVVTDIKDTTVQLSWSRGFDNH 630

Query: 331 AVSDPSLKLSIV--------WLRG-SEPIDFESEPRFVQSN------DYSLTVTKSSELD 375
           +   P  K  I         W +  + P + E      Q        DY   V  S+ L 
Sbjct: 631 S---PIAKYVIQVRTPIFSHWKQARTNPANIEGNSETAQVGNLIPWMDYEFRVLASNILG 687

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
            G        E     A+       P  APS           + +++W P+  +   G  
Sbjct: 688 VG--------EPSMPSAKIRTKEAAPTVAPSG-LNGGGGAPGELIINWTPMQREYQNGDG 738

Query: 436 RGYKV-------QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
            GY +       Q W      G+     V + ES         P +    ++ AFN    
Sbjct: 739 FGYNLTFRKEGTQVWKTATVLGAESLHYVYRNES-------IAPYTPFEVKIKAFNKKGE 791

Query: 489 GPPSEIISFV-----TPEGVPG--TVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKI 539
           GP S ++S V      P   P   TV S+ A  +      + W  V+    NGVL+GY+I
Sbjct: 792 GPES-LVSIVHSAEEEPRVAPSNITVNSVMATEMD-----ITWNSVEDHDMNGVLLGYEI 845

Query: 540 KYQSVKGTKVGPLLERLPYISDP-TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           +Y      K G   E    +      +SA +  L P+TKY + +  Y +AG G  S
Sbjct: 846 RYW-----KHGDKEEAADRVRTAGLVSSAHVTDLHPNTKYHVAVRAYNRAGTGPAS 896



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 78/320 (24%), Positives = 126/320 (39%), Gaps = 44/320 (13%)

Query: 126 PYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
           P F  +P    F   + EE +   C+A   P     W  NG  I +   N R ++    +
Sbjct: 32  PVFEEQPRNTLFPEGSSEEQILLTCQARASPPATYRWKLNGTEI-KIETNSRYRLNGGNL 90

Query: 183 TIEN-LRKSDTGNYGCNATNSLGYVY-KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC 240
            I N ++  D G Y C A+NS+G V  ++ YV         TE        +G  V+ TC
Sbjct: 91  VISNPVKLKDAGFYQCVASNSVGTVVSREAYVRFGFLQEFSTEERDPVRGTEGWGVMFTC 150

Query: 241 RVFGAPKP-----EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARN 291
               +P P     E  W  N           R+    TG+L I     +D G Y+CFA  
Sbjct: 151 ----SPPPHFPGIEYRWFVNDFPNFISTDRRRFISQATGNLYIAKTEASDLGNYSCFATG 206

Query: 292 KLGTAQGSGSLTVKEHTHITDQ------------PEDYEVEAGQSATFRCNAVSDPSLKL 339
            + + + S   T  + + + +             P D    AGQ  +  C A  +P  + 
Sbjct: 207 HIDSFKKSVFSTSSQLSLVREDSRPYAPTIKAKFPSDTFALAGQLVSLECFAFGNPVPQ- 265

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            I W +    +D     R++ +    L   + S  D G Y C A+     I+ + T   +
Sbjct: 266 -IRWRK----LDGGQSSRWITTEPL-LEFKEVSFEDEGTYECEAEN----IQGKDTYRGR 315

Query: 400 VPLEAPSNFTLIQVIDAKKA 419
           + ++A   +  ++VI  K+A
Sbjct: 316 IIIQAQPEW--LKVISDKEA 333


>gi|355746565|gb|EHH51179.1| hypothetical protein EGM_10513 [Macaca fascicularis]
          Length = 1028

 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 167/625 (26%), Positives = 268/625 (42%), Gaps = 48/625 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P   S +I    +   L I + +  D GSY 
Sbjct: 239 AAKGSTVKLECFALGNPIPQINWRRSDGLPF--SSKIKLRKFNGVLEIPNFQQEDAGSYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    + +  A E+++ +EC+ASG P+P   W+ NG
Sbjct: 297 CIAENSRGKNVARG-RLTYYAKPHWVQLIKDVETAVEDSLYWECRASGKPKPSYRWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +       R ++    +TI NL  +D+G + C A N  G VY    + V+A AP+ ++
Sbjct: 356 AALVL---EERIQIENGALTITNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSK 412

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
            P  +      G  V L C+   +P+   +W      +    R ++L+ G LKI +V  A
Sbjct: 413 NPMKKLVQVQVGSLVSLDCKPRASPRARSSWKKGDVSVQEHARISLLKDGGLKIANVTKA 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L + 
Sbjct: 473 DAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDII 532

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 533 FTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADL 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
            V+     P N  + ++ D   A +SW       +PV   S++       G++  T    
Sbjct: 593 IVRGSPGPPENVKVDEITDT-TAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT---- 647

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 648 ----TVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S      GS S   + W  V  E  NG   GY + ++ +    V   ++ +    D 
Sbjct: 702 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPL---GVTTWIQTVVTSPDT 758

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y + +  Y   G+G  S    +F     P   P  V     + + 
Sbjct: 759 PRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSE 818

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FW 641
           + +SW  +P    N     Y + +W
Sbjct: 819 IEVSWNTIPWKLSNGHLLGYEVRYW 843



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 159/618 (25%), Positives = 243/618 (39%), Gaps = 48/618 (7%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V  A+       ++           P   V+ PE + AA
Sbjct: 181 LYISKVEPSDVGNYTCVVTSLVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 240

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P S       RK     + I N ++ D G+Y C
Sbjct: 241 KGSTVKLECFALGNPIPQINWRRSDGLPFSSKI--KLRKFN-GVLEIPNFQQEDAGSYEC 297

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K+V    L +   P   +  KD  T    ++   CR  G PKP   W+ N
Sbjct: 298 IAENSRG---KNVARGRLTYYAKPHWVQLIKDVETAVEDSLYWECRASGKPKPSYRWLKN 354

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
              L       +E G L IT+++  DSG + C A NK G    S  L  V      +  P
Sbjct: 355 GAALVLEERIQIENGALTITNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNP 414

Query: 315 ED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
                +V+ G   +  C   + P  + S  W +G   +  +   R     D  L +   +
Sbjct: 415 MKKLVQVQVGSLVSLDCKPRASPRARSS--WKKGD--VSVQEHARISLLKDGGLKIANVT 470

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQ 429
           + D+G YTC A+ +         L V  P     APSN   + V   +  ++        
Sbjct: 471 KADAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSN---MDVSVGESVILPCQVQHDP 527

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
            L   F  Y      +   +GS  E +   G S+   + + +    +   V       + 
Sbjct: 528 LLDIIFTWYFNGALADFKKDGSHFEKV--GGSSSGDLMIRNIQLKHSGKYVCMVQTGVDS 585

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
             S     V   G PG  ++++   +  +   L W + +  +  ++ Y I  Q+     V
Sbjct: 586 VSSAADLIV--RGSPGPPENVKVDEITDTTAQLSWKEGKDNHSPVISYSI--QARTPFSV 641

Query: 550 G-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPF 602
           G   +  +P + D  T +A +  L P  +Y   +    K G G  S      +    VP 
Sbjct: 642 GWQTVTTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
             P  V G G + + LVI+W  +PE   N   F Y + +R       W Q  V       
Sbjct: 702 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGV-TTWIQTVVTSPDTPR 760

Query: 663 LVLANQPT--FQPYEIKV 678
            V  N+    + PYE+KV
Sbjct: 761 YVFRNESIVPYSPYEVKV 778



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 168/729 (23%), Positives = 277/729 (37%), Gaps = 106/729 (14%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  +   +RI   N   +L I ++  +D G + C   N  G   
Sbjct: 339  CRASGKPKPSYRWLKNGAALVLEERIQIEN--GALTITNLSVTDSGMFQCIAENKHGLVY 396

Query: 115  SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
            S S +L V+A AP F+  P  + +       V+ +CK    P     W      + +   
Sbjct: 397  S-SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSWKKGDVSVQEHAR 455

Query: 172  NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
                K G   + I N+ K+D G Y C A N  G      ++ V+     IT AP +    
Sbjct: 456  ISLLKDG--GLKIANVTKADAGTYTCMAENQFGKANGTTHL-VVTEPTRITLAPSNMDVS 512

Query: 232  DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
             G++V+L C+V   P  ++   W  N             E  GG      +GDL I ++ 
Sbjct: 513  VGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGS----SSGDLMIRNIQ 568

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
               SG+Y C  +  + +   +  L V+                G     + + ++D + +
Sbjct: 569  LKHSGKYVCMVQTGVDSVSSAADLIVRG-------------SPGPPENVKVDEITDTTAQ 615

Query: 339  LSIVWLRG----SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD------ 388
            LS  W  G    S  I +  + R   S  +  TVT   E+  G+       EL+      
Sbjct: 616  LS--WKEGKDNHSPVISYSIQARTPFSVGWQ-TVTTVPEVIDGKTHTATVVELNPWVEYE 672

Query: 389  --------------FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
                           + ++   T +   E P +          + V++W+PV  +   G 
Sbjct: 673  FRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGE 732

Query: 435  -------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
                   FR   V TW +           V + ES        VP S    +V  +N   
Sbjct: 733  GFGYVVAFRPLGVTTWIQTVVTSPDTPRYVFRNES-------IVPYSPYEVKVGVYNNKG 785

Query: 488  NGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSV 544
             GP S + +  + E  P    S + A  L SS   + W  +  +  NG L+GY+++Y + 
Sbjct: 786  EGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNG 845

Query: 545  KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
             G +      ++        TSA+L GL+ +  Y   +  Y  AG G  S  +       
Sbjct: 846  GGKEESSSKVKVA----GNETSARLRGLKSNLAYYTAVRAYNSAGVGPFSATVNATTKKT 901

Query: 601  -PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
             P + P NV    +T   ++++W  +  +E+ +    Y++F+R  +     N   VL+  
Sbjct: 902  PPSQPPGNVVWN-ATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQ----NNVQVLNTN 956

Query: 660  Q--SELVLANQPTFQPYEIKVVQTWTEKDGEGS----IRELIVNKGESTTTEVDKFVPAS 713
            +  +EL+L   P  + Y I+V  T    DG  S    I  +       +T+ +    P S
Sbjct: 957  KTSAELLL---PIKEDYIIEVKATTDGGDGTSSEQIRIPRITSMDARGSTSAISNVHPMS 1013

Query: 714  KNFARVLAF 722
                 VL F
Sbjct: 1014 SYLPIVLFF 1022



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 146/374 (39%), Gaps = 28/374 (7%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFSDQGSY 102
           V   ++K+ L C   G P P   W  +G  I+ S +   + N G  ++I      D G+Y
Sbjct: 39  VGSEDEKITLNCEARGNPSPHYRWQLNGSDIDTSMEHRYKLNGGNLVVINPNRNWDTGTY 98

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEI 157
            C  +N +G   S    L       F T     ++  E + V   C   G P    E   
Sbjct: 99  QCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLC---GPPPHSGELSY 155

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDVYVN 213
            W+ N  P S    + RR V      + I  +  SD GNY C  T+ +    V       
Sbjct: 156 AWIFNEYP-SFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSLVTNARVLGSPTPL 214

Query: 214 VL-------AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           VL        + P+I  + P+      G TV L C   G P P++NW  +       +  
Sbjct: 215 VLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIK 274

Query: 266 ILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
           + +  G L+I +    D+G Y C A N  G     G LT     H     +D E     S
Sbjct: 275 LRKFNGVLEIPNFQQEDAGSYECIAENSRGKNVARGRLTYYAKPHWVQLIKDVETAVEDS 334

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             + C A   P  K S  WL+    +  E     +Q  + +LT+T  S  DSG + C A+
Sbjct: 335 LYWECRASGKP--KPSYRWLKNGAALVLEER---IQIENGALTITNLSVTDSGMFQCIAE 389

Query: 385 TELDFIEAQATLTV 398
            +   + + A L V
Sbjct: 390 NKHGLVYSSAELKV 403



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 125/300 (41%), Gaps = 32/300 (10%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +E+E +T  C+A G P P   W  NG  I  +  +  +  G
Sbjct: 22  LLQGPVFVKEPSNSIFPVGSEDEKITLNCEARGNPSPHYRWQLNGSDIDTSMEHRYKLNG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N + I   R  DTG Y C ATNSLG +         A+        +   +V +G+ VV
Sbjct: 82  GNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        WI N+     E    R+   ETG L I+ V  +D G YTC 
Sbjct: 142 LLC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCV 197

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
             + +  A+  GS   L ++    + +         PE      G +    C A+ +P  
Sbjct: 198 VTSLVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +++  W R S+ + F S+ +  + N   L +    + D+G Y C A+       A+  LT
Sbjct: 258 QIN--WRR-SDGLPFSSKIKLRKFNGV-LEIPNFQQEDAGSYECIAENSRGKNVARGRLT 313


>gi|109035942|ref|XP_001101862.1| PREDICTED: contactin-3-like [Macaca mulatta]
          Length = 1028

 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 167/625 (26%), Positives = 268/625 (42%), Gaps = 48/625 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P   S +I    +   L I + +  D GSY 
Sbjct: 239 AAKGSTVKLECFALGNPIPQINWRRSDGLPF--SSKIKLRKFNGVLEIPNFQQEDAGSYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    + +  A E+++ +EC+ASG P+P   W+ NG
Sbjct: 297 CIAENSRGKNVARG-RLTYYAKPHWVQLIKDVETAVEDSLYWECRASGKPKPSYRWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +       R ++    +TI NL  +D+G + C A N  G VY    + V+A AP+ ++
Sbjct: 356 AALVL---EERIQIENGALTITNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSK 412

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
            P  +      G  V L C+   +P+   +W      +    R ++L+ G LKI +V  A
Sbjct: 413 NPMKKLVQVQVGSLVSLDCKPRASPRARSSWKKGDVSVQEHARISLLKDGGLKIANVTKA 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L + 
Sbjct: 473 DAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDII 532

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 533 FTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADL 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
            V+     P N  + ++ D   A +SW       +PV   S++       G++  T    
Sbjct: 593 IVRGSPGPPENVKVDEITDT-TAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT---- 647

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 648 ----TVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S      GS S   + W  V  E  NG   GY + ++ +    V   ++ +    D 
Sbjct: 702 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPL---GVTTWIQTVVTSPDT 758

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y + +  Y   G+G  S    +F     P   P  V     + + 
Sbjct: 759 PRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSE 818

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FW 641
           + +SW  +P    N     Y + +W
Sbjct: 819 IEVSWNTIPWKLSNGHLLGYEVRYW 843



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 159/618 (25%), Positives = 243/618 (39%), Gaps = 48/618 (7%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V  A+       ++           P   V+ PE + AA
Sbjct: 181 LYISKVEPSDVGNYTCVVTSLVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 240

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P S       RK     + I N ++ D G+Y C
Sbjct: 241 KGSTVKLECFALGNPIPQINWRRSDGLPFSSKI--KLRKFN-GVLEIPNFQQEDAGSYEC 297

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K+V    L +   P   +  KD  T    ++   CR  G PKP   W+ N
Sbjct: 298 IAENSRG---KNVARGRLTYYAKPHWVQLIKDVETAVEDSLYWECRASGKPKPSYRWLKN 354

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
              L       +E G L IT+++  DSG + C A NK G    S  L  V      +  P
Sbjct: 355 GAALVLEERIQIENGALTITNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNP 414

Query: 315 ED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
                +V+ G   +  C   + P  + S  W +G   +  +   R     D  L +   +
Sbjct: 415 MKKLVQVQVGSLVSLDCKPRASPRARSS--WKKGD--VSVQEHARISLLKDGGLKIANVT 470

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQ 429
           + D+G YTC A+ +         L V  P     APSN   + V   +  ++        
Sbjct: 471 KADAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSN---MDVSVGESVILPCQVQHDP 527

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
            L   F  Y      +   +GS  E +   G S+   + + +    +   V       + 
Sbjct: 528 LLDIIFTWYFNGALADFKKDGSHFEKV--GGSSSGDLMIRNIQLKHSGKYVCMVQTGVDS 585

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
             S     V   G PG  ++++   +  +   L W + +  +  ++ Y I  Q+     V
Sbjct: 586 VSSAADLIV--RGSPGPPENVKVDEITDTTAQLSWKEGKDNHSPVISYSI--QARTPFSV 641

Query: 550 G-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPF 602
           G   +  +P + D  T +A +  L P  +Y   +    K G G  S      +    VP 
Sbjct: 642 GWQTVTTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
             P  V G G + + LVI+W  +PE   N   F Y + +R       W Q  V       
Sbjct: 702 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGV-TTWIQTVVTSPDTPR 760

Query: 663 LVLANQPT--FQPYEIKV 678
            V  N+    + PYE+KV
Sbjct: 761 YVFRNESIVPYSPYEVKV 778



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 168/729 (23%), Positives = 277/729 (37%), Gaps = 106/729 (14%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  +   +RI   N   +L I ++  +D G + C   N  G   
Sbjct: 339  CRASGKPKPSYRWLKNGAALVLEERIQIEN--GALTITNLSVTDSGMFQCIAENKHGLVY 396

Query: 115  SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
            S S +L V+A AP F+  P  + +       V+ +CK    P     W      + +   
Sbjct: 397  S-SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSWKKGDVSVQEHAR 455

Query: 172  NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
                K G   + I N+ K+D G Y C A N  G      ++ V+     IT AP +    
Sbjct: 456  ISLLKDG--GLKIANVTKADAGTYTCMAENQFGKANGTTHL-VVTEPTRITLAPSNMDVS 512

Query: 232  DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
             G++V+L C+V   P  ++   W  N             E  GG      +GDL I ++ 
Sbjct: 513  VGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGS----SSGDLMIRNIQ 568

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
               SG+Y C  +  + +   +  L V+                G     + + ++D + +
Sbjct: 569  LKHSGKYVCMVQTGVDSVSSAADLIVRG-------------SPGPPENVKVDEITDTTAQ 615

Query: 339  LSIVWLRG----SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD------ 388
            LS  W  G    S  I +  + R   S  +  TVT   E+  G+       EL+      
Sbjct: 616  LS--WKEGKDNHSPVISYSIQARTPFSVGWQ-TVTTVPEVIDGKTHTATVVELNPWVEYE 672

Query: 389  --------------FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
                           + ++   T +   E P +          + V++W+PV  +   G 
Sbjct: 673  FRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGE 732

Query: 435  -------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
                   FR   V TW +           V + ES        VP S    +V  +N   
Sbjct: 733  GFGYVVAFRPLGVTTWIQTVVTSPDTPRYVFRNES-------IVPYSPYEVKVGVYNNKG 785

Query: 488  NGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSV 544
             GP S + +  + E  P    S + A  L SS   + W  +  +  NG L+GY+++Y + 
Sbjct: 786  EGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNG 845

Query: 545  KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
             G +      ++        TSA+L GL+ +  Y   +  Y  AG G  S  +       
Sbjct: 846  GGKEESSSKVKVA----GNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSATVNATTKKT 901

Query: 601  -PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
             P + P NV    +T   ++++W  +  +E+ +    Y++F+R  +     N   VL+  
Sbjct: 902  PPSQPPGNVVWN-ATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQ----NNVQVLNTN 956

Query: 660  Q--SELVLANQPTFQPYEIKVVQTWTEKDGEGS----IRELIVNKGESTTTEVDKFVPAS 713
            +  +EL+L   P  + Y I+V  T    DG  S    I  +       +T+ +    P S
Sbjct: 957  KTSAELLL---PIKEDYIIEVKATTDGGDGTSSEQIRIPRITSMDARGSTSAISNVHPMS 1013

Query: 714  KNFARVLAF 722
                 VL F
Sbjct: 1014 SYLPIVLFF 1022



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 146/374 (39%), Gaps = 28/374 (7%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFSDQGSY 102
           V   ++K+ L C   G P P   W  +G  I+ + +   + N G  ++I      D G+Y
Sbjct: 39  VGSEDEKITLNCEARGNPSPHYRWQLNGSDIDTTMEHRYKLNGGNLVVINPNRNWDTGTY 98

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEI 157
            C  +N +G   S    L       F T     ++  E + V   C   G P    E   
Sbjct: 99  QCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLC---GPPPHSGELSY 155

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDVYVN 213
            W+ N  P S    + RR V      + I  +  SD GNY C  T+ +    V       
Sbjct: 156 AWIFNEYP-SFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSLVTNARVLGSPTPL 214

Query: 214 VL-------AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           VL        + P+I  + P+      G TV L C   G P P++NW  +       +  
Sbjct: 215 VLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIK 274

Query: 266 ILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
           + +  G L+I +    D+G Y C A N  G     G LT     H     +D E     S
Sbjct: 275 LRKFNGVLEIPNFQQEDAGSYECIAENSRGKNVARGRLTYYAKPHWVQLIKDVETAVEDS 334

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             + C A   P  K S  WL+    +  E     +Q  + +LT+T  S  DSG + C A+
Sbjct: 335 LYWECRASGKP--KPSYRWLKNGAALVLEER---IQIENGALTITNLSVTDSGMFQCIAE 389

Query: 385 TELDFIEAQATLTV 398
            +   + + A L V
Sbjct: 390 NKHGLVYSSAELKV 403



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 124/300 (41%), Gaps = 32/300 (10%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +E+E +T  C+A G P P   W  NG  I     +  +  G
Sbjct: 22  LLQGPVFVKEPSNSIFPVGSEDEKITLNCEARGNPSPHYRWQLNGSDIDTTMEHRYKLNG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N + I   R  DTG Y C ATNSLG +         A+        +   +V +G+ VV
Sbjct: 82  GNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        WI N+     E    R+   ETG L I+ V  +D G YTC 
Sbjct: 142 LLC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCV 197

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
             + +  A+  GS   L ++    + +         PE      G +    C A+ +P  
Sbjct: 198 VTSLVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +++  W R S+ + F S+ +  + N   L +    + D+G Y C A+       A+  LT
Sbjct: 258 QIN--WRR-SDGLPFSSKIKLRKFNGV-LEIPNFQQEDAGSYECIAENSRGKNVARGRLT 313


>gi|334335513|ref|XP_003341782.1| PREDICTED: contactin-4 [Monodelphis domestica]
          Length = 1027

 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 184/718 (25%), Positives = 288/718 (40%), Gaps = 93/718 (12%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P  IW + DG  I    R  + N    L I + +  D G Y C   N 
Sbjct: 243 VKLECFALGNPVPTIIWRRADGKQIARKARRHKSN--GILEIPNFQQEDAGLYECVAENS 300

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P +  +   I+ A EE++ +ECKA+G P+P   W+ NG+P+   
Sbjct: 301 RGKNVARG-QLTFYAQPNWNQKINDIHVAIEESIFWECKANGRPKPTYRWLKNGEPLLT- 358

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
               R ++    + I  +  SD G Y C A N  G ++    ++V+A  P+ +       
Sbjct: 359 --QDRIQIEHGTLNITTVNLSDAGMYQCVAENRHGIIFASAELSVIALGPDFSRTLLKRM 416

Query: 230 TVD--GKTVVLTCRVFGAPKPEVNWIHNQKELT--GGRYTILETGDLKITDVAFADSGEY 285
           T+   G  VV+ C+   +P+P   W    KE+     R T  E G L+I +V  +D+G Y
Sbjct: 417 TLVKVGGEVVIECKPKASPRPAYTW-KKGKEIVRENERITFSEDGSLRIMNVTKSDAGSY 475

Query: 286 TCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLR 345
           TC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   W  
Sbjct: 476 TCIATNHFGTASSTGNLIVKDATRLLVPPSSMDVTVGESIVLPCQVSHDHSLDIVFTWSF 535

Query: 346 GSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
               IDF+ +         Q +   L +       +G+Y C  QT +D I A A L V+ 
Sbjct: 536 NGHLIDFDKDGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKISATADLIVRG 595

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSIRELI 456
           P   P   T+ ++ D   A +SW P +          Y +Q  T          ++ ELI
Sbjct: 596 PPGPPEAVTIDEITDT-TAQLSWRPGADN--HSPITMYVIQARTPFSVGWQAVNTVPELI 652

Query: 457 VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTPEGVPGTV 507
              G + T  V    P  +   RV+A N    G PS         E +  VTP  V G  
Sbjct: 653 --DGRTFTATVVGLNPWVEYEFRVVAANTIGIGEPSRPSEKRRTEEALPEVTPANVSGGG 710

Query: 508 QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565
            S        S   + W  V  E  NG   GY + ++          ++ +   +D +  
Sbjct: 711 GS-------KSELVITWETVPEELQNGGGFGYVVAFRPFGKVS---WMQTVLASADASKY 760

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNLVI 620
             +   L P + Y + +  Y   G+G+ S           P K P ++  R  +  ++ +
Sbjct: 761 VFRNESLPPFSPYEVKVGVYNNKGEGSFSPVTVVYSAEEEPTKPPPSIFARSLSATDIEV 820

Query: 621 SWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQ 680
            W+                                     S L   ++   Q YE+K   
Sbjct: 821 FWS-------------------------------------SPLETLSKGRIQGYEVKY-- 841

Query: 681 TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
            W+  D E + R+ I   G  T+T++     ++     V A+N A  GP S  ++  T
Sbjct: 842 -WSHDDKEENARK-IRTIGNQTSTKITNLKGSALYHLAVKAYNTAGTGPYSVTVNVTT 897



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 172/670 (25%), Positives = 258/670 (38%), Gaps = 69/670 (10%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V+ PE +  
Sbjct: 178 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPT 237

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   +GK I++     RR      + I N ++ D G Y 
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKQIAR---KARRHKSNGILEIPNFQQEDAGLYE 294

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P   +   D +    +++   C+  G PKP   W+ N 
Sbjct: 295 CVAENSRGKNVARGQLTFYAQ-PNWNQKINDIHVAIEESIFWECKANGRPKPTYRWLKNG 353

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           + L       +E G L IT V  +D+G Y C A N+ G    S  L+V     I   P+ 
Sbjct: 354 EPLLTQDRIQIEHGTLNITTVNLSDAGMYQCVAENRHGIIFASAELSV-----IALGPDF 408

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  + +  W +G E I  E+E R   S D SL +
Sbjct: 409 SRTLLKRMTLVKVGGEVVIECKPKASP--RPAYTWKKGKE-IVRENE-RITFSEDGSLRI 464

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV------- 421
              ++ D+G YTC A        +   L V+         + + V   +  V+       
Sbjct: 465 MNVTKSDAGSYTCIATNHFGTASSTGNLIVKDATRLLVPPSSMDVTVGESIVLPCQVSHD 524

Query: 422 -SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
            S + V   S  GH   +      +KDG+   R    +          +   A K    V
Sbjct: 525 HSLDIVFTWSFNGHLIDF------DKDGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMV 578

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
                  +     I+      G PG  +++    +  +   L W      +  +  Y I 
Sbjct: 579 QTSVDKISATADLIV-----RGPPGPPEAVTIDEITDTTAQLSWRPGADNHSPITMYVI- 632

Query: 541 YQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES----- 594
            Q+     VG   +  +P + D  T +A + GL P  +Y   +      G G  S     
Sbjct: 633 -QARTPFSVGWQAVNTVPELIDGRTFTATVVGLNPWVEYEFRVVAANTIGIGEPSRPSEK 691

Query: 595 -KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQD 653
            +    +P   P NV G G + + LVI+W  +PE   N   F Y + +R      +W Q 
Sbjct: 692 RRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGGGFGYVVAFRPFGK-VSWMQT 750

Query: 654 DVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVP 711
            +     S+ V  N+  P F PYE+K V  +  K GEGS   + V      + E +   P
Sbjct: 751 VLASADASKYVFRNESLPPFSPYEVK-VGVYNNK-GEGSFSPVTV----VYSAEEEPTKP 804

Query: 712 ASKNFARVLA 721
               FAR L+
Sbjct: 805 PPSIFARSLS 814



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 145/369 (39%), Gaps = 30/369 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  ++            SL+I +  +  D G+Y C  +
Sbjct: 44  KKVKLNCEVKGNPKPLIRWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDAGTYQCIAT 103

Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVHN 162
           N  G   S    L       F T     ++  + + +   C   G P    E    W+ N
Sbjct: 104 NSFGTIVSKEAKLQFAYLENFKTRTRSTVSVRQGQGMVLLC---GPPPHSGELSYAWIFN 160

Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN- 213
             P  Q   + RR V      + I  + KSD GNY C  TN+      LG     +  N 
Sbjct: 161 EYPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRND 217

Query: 214 --VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILET 269
             +  + P+I  + P+   T  G TV L C   G P P + W   + K++          
Sbjct: 218 GVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNPVPTIIWRRADGKQIARKARRHKSN 277

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I +    D+G Y C A N  G     G LT     +   +  D  V   +S  + C
Sbjct: 278 GILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWNQKINDIHVAIEESIFWEC 337

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   P  K +  WL+  EP+  +     +Q    +L +T  +  D+G Y C A+     
Sbjct: 338 KANGRP--KPTYRWLKNGEPLLTQDR---IQIEHGTLNITTVNLSDAGMYQCVAENRHGI 392

Query: 390 IEAQATLTV 398
           I A A L+V
Sbjct: 393 IFASAELSV 401



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 116/302 (38%), Gaps = 32/302 (10%)

Query: 119 DLSVLAAPYFTVEPEFIN---AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D + L  P F  EP  +     +EE+ V   C+  G P+P I W  NG  +     + R 
Sbjct: 19  DDNTLHGPIFIREPSHVMFPLDSEEKKVKLNCEVKGNPKPLIRWKLNGTDVDIG-MDFRY 77

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            V    + I N  K+ D G Y C ATNS G +         A+        +   +V  G
Sbjct: 78  SVVEGSLLINNPNKTQDAGTYQCIATNSFGTIVSKEAKLQFAYLENFKTRTRSTVSVRQG 137

Query: 234 KTVVLTCRVFGAPKPEVN-----WIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYT 286
           + +VL C     P P        WI N+        R+   ETG+L I  V  +D G YT
Sbjct: 138 QGMVLLC----GPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYT 193

Query: 287 CFARNK------LG-----TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           C   N       LG       +  G +   E       PE      G +    C A+ +P
Sbjct: 194 CVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNP 253

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
               +I+W R ++      + R  +SN   L +    + D+G Y C A+       A+  
Sbjct: 254 V--PTIIWRR-ADGKQIARKARRHKSNGI-LEIPNFQQEDAGLYECVAENSRGKNVARGQ 309

Query: 396 LT 397
           LT
Sbjct: 310 LT 311



 Score = 39.7 bits (91), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 21/192 (10%)

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            +G  +GY+V+ W+  D E + R+ I   G  T+T++     ++     V A+N A  GP 
Sbjct: 831  KGRIQGYEVKYWSHDDKEENARK-IRTIGNQTSTKITNLKGSALYHLAVKAYNTAGTGPY 889

Query: 492  SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
            S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 890  SVTVNVTTKKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNR 945

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
             +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P  + 
Sbjct: 946  QSSTS--------VIETNKTSVELS-LPFDEDYIIEIRPFSDGGDGSSSEQI-RIPKISS 995

Query: 606  DNVEGRGSTPNN 617
                G G++ +N
Sbjct: 996  AYARGSGASTSN 1007


>gi|397522453|ref|XP_003831281.1| PREDICTED: contactin-4 [Pan paniscus]
          Length = 1026

 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 189/727 (25%), Positives = 294/727 (40%), Gaps = 112/727 (15%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P  IW + DG PI    R  + N    L I + +  D G Y C   N 
Sbjct: 243 VKLECFALGNPVPTIIWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGLYECVAENS 300

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P +  +   I+ A EE V +ECKA+G P+P   W+ NG+P+   
Sbjct: 301 RGKNVARG-QLTFYAQPNWIQKINDIHVAMEENVFWECKANGRPKPTYRWLKNGEPLLT- 358

Query: 170 PPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
               R ++    G   ITI NL  SD G Y C A N  G ++ +  ++V+A  P+ +   
Sbjct: 359 ----RDRIQIEQGTLNITIVNL--SDAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTL 412

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADS 282
               T+   G  V + C+   +PKP   W   +  +    R TI E G+L+I +V  +D+
Sbjct: 413 LKRVTLVKVGGEVAIECKPKASPKPVYTWKKGRDIVKENERITISEDGNLRIINVTKSDA 472

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   
Sbjct: 473 GSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFT 532

Query: 343 WLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           W      IDF+ +         Q +   L +       +G+Y C  QT +D + A A L 
Sbjct: 533 WSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLI 592

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGE 449
           V+ P   P   T+ ++ D   A +SW P     SP ++      Y +Q  T         
Sbjct: 593 VRGPPGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFSVGWQAV 645

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTP 500
            ++ ELI   G++ T  V    P  +   R +A N    G PS         E +  VTP
Sbjct: 646 STVPELI--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTP 703

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
             V G   S        S   + W  V  E  NG   GY + ++       G ++  L  
Sbjct: 704 ANVSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFR-----PYGKMIWMLTV 751

Query: 559 I--SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGR 611
           +  +D +    +   + P + + + +  +   G+G  S           P K P ++  R
Sbjct: 752 LASADASRYVFRNESVHPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFAR 811

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
             +  ++ + W +  E                                       N+   
Sbjct: 812 SLSATDIEVFWASPLE--------------------------------------KNRGRI 833

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
           Q YE+K    W  +D E + R+ I   G  T+T++     +      V A+N A  GP S
Sbjct: 834 QGYEVKY---WRHEDKEENARK-IRTVGNQTSTKITNLKGSVLYHLAVKAYNSAGTGPSS 889

Query: 732 EIISFVT 738
             ++  T
Sbjct: 890 ATVNVTT 896



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 160/638 (25%), Positives = 240/638 (37%), Gaps = 85/638 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V+ PE +  
Sbjct: 178 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPT 237

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   +GKPI++     RR      + I N ++ D G Y 
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIAR---KARRHKSNGILEIPNFQQEDAGLYE 294

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P   +   D +    + V   C+  G PKP   W+ N 
Sbjct: 295 CVAENSRGKNVARGQLTFYAQ-PNWIQKINDIHVAMEENVFWECKANGRPKPTYRWLKNG 353

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           + L       +E G L IT V  +D+G Y C A NK G    +  L+V     I   P+ 
Sbjct: 354 EPLLTRDRIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSV-----IAVGPDF 408

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  K    W +G + +  E+E R   S D +L +
Sbjct: 409 SRTLLKRVTLVKVGGEVAIECKPKASP--KPVYTWKKGRDIVK-ENE-RITISEDGNLRI 464

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
              ++ D+G YTC A        +   L V+ P       + + V   +  V+       
Sbjct: 465 INVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHD 524

Query: 429 QSL----RGHFRGYKVQTWTEKD------GEGSIRELIVNKGE---------STTTEVDK 469
            SL       F G+ +    + D      G+ S  +L++   +            T VD+
Sbjct: 525 HSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDR 584

Query: 470 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPE 528
              A+    R         GPP    +    E    T Q S    P   S   +  ++  
Sbjct: 585 LSAAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQAR 635

Query: 529 QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
            P      + + +Q+V           +P + D  T +A + GL P  +Y          
Sbjct: 636 TP------FSVGWQAV---------STVPELIDGKTFTATVVGLNPWVEYEFRTVAANVI 680

Query: 589 GDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F Y + +R
Sbjct: 681 GIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFR 740

Query: 643 RHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
            +     W    +     S  V  N+    F P+E+KV
Sbjct: 741 PYGK-MIWMLTVLASADASRYVFRNESVHPFSPFEVKV 777



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 143/369 (38%), Gaps = 30/369 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  ++            SL+I +  +  D G+Y C  +
Sbjct: 44  KKVKLNCEVKGNPKPHIRWKLNGTDVDTGMDFRYSVVEGSLLINNPNKTQDAGTYQCTAT 103

Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVHN 162
           N  G   S    L       F T     ++    + +   C   G P    E    W+ N
Sbjct: 104 NSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMVLLC---GPPPHSGELSYAWIFN 160

Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN- 213
             P  Q   + RR V      + I  + KSD GNY C  TN+      LG     +  N 
Sbjct: 161 EYPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRND 217

Query: 214 --VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILET 269
             +  + P+I  + P+   T  G TV L C   G P P + W   + K +          
Sbjct: 218 GVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHKSN 277

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I +    D+G Y C A N  G     G LT     +   +  D  V   ++  + C
Sbjct: 278 GILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAMEENVFWEC 337

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   P  K +  WL+  EP+        +Q    +L +T  +  D+G Y C A+ +   
Sbjct: 338 KANGRP--KPTYRWLKNGEPLLTRDR---IQIEQGTLNITIVNLSDAGMYQCLAENKHGV 392

Query: 390 IEAQATLTV 398
           I + A L+V
Sbjct: 393 IFSNAELSV 401



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 117/303 (38%), Gaps = 34/303 (11%)

Query: 119 DLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D S L  P F  EP    F   +EE+ V   C+  G P+P I W  NG  +     + R 
Sbjct: 19  DDSTLHGPIFIQEPSPVMFPLDSEEKKVKLNCEVKGNPKPHIRWKLNGTDVDTG-MDFRY 77

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            V    + I N  K+ D G Y C ATNS G +         A+        +   +V  G
Sbjct: 78  SVVEGSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRG 137

Query: 234 KTVVLTCRVFGAPKPEVN-----WIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYT 286
           + +VL C     P P        WI N+        R+   ETG+L I  V  +D G YT
Sbjct: 138 QGMVLLC----GPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYT 193

Query: 287 CFARNK------LG-----TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           C   N       LG       +  G +   E       PE      G +    C A+ +P
Sbjct: 194 CVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNP 253

Query: 336 SLKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
               +I+W R   +PI    + R  +SN   L +    + D+G Y C A+       A+ 
Sbjct: 254 V--PTIIWRRADGKPI--ARKARRHKSNGI-LEIPNFQQEDAGLYECVAENSRGKNVARG 308

Query: 395 TLT 397
            LT
Sbjct: 309 QLT 311



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 21/192 (10%)

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            RG  +GY+V+ W  +D E + R+ I   G  T+T++     +      V A+N A  GP 
Sbjct: 830  RGRIQGYEVKYWRHEDKEENARK-IRTVGNQTSTKITNLKGSVLYHLAVKAYNSAGTGPS 888

Query: 492  SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
            S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 889  SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNR 944

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
             +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P  + 
Sbjct: 945  QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIPKISN 994

Query: 606  DNVEGRGSTPNN 617
                G G++ +N
Sbjct: 995  AYARGSGASTSN 1006


>gi|326928154|ref|XP_003210246.1| PREDICTED: contactin-3-like [Meleagris gallopavo]
          Length = 941

 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 185/387 (47%), Gaps = 15/387 (3%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P     ++ + N    + I + +  D G Y 
Sbjct: 152 AAKGSTVKLECFALGNPVPQINWRRTDGMPFPSKIKLRKSN--GMIEIPNFQQEDAGLYE 209

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    +    A E+T+ ++C+ASG P+P   W+ NG
Sbjct: 210 CITENSRGKNIARG-RLTYYAKPHWIQMIKDTEIAVEDTLYWDCRASGKPKPSYRWLKNG 268

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +S      R +V    +TI NL  +D+G Y C A N  G +Y    + V+A AP+ ++
Sbjct: 269 DQLSV---EGRIQVENGALTISNLNLTDSGRYQCVAENKHGVIYSSAELRVVASAPDFSK 325

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
            P  +      G TV   C+   +PK   +W    ++L    R T+L+ G L+IT+V   
Sbjct: 326 NPMKKMIQVQIGSTVDFECKPKASPKARCSWKKGGEQLHENERITLLKDGGLRITNVTKV 385

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ GTA G+ +L V E T IT  P + +V  G+S    C    DP L +S
Sbjct: 386 DAGSYTCVATNQFGTASGTTNLVVTEPTRITLAPSNMDVTVGESVILPCQVQHDPILDIS 445

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S    L +       SG+Y C  +TE+D + + A L
Sbjct: 446 FTWYFNGTLTDFKKDASHFEKVGGSASGDLMIRNIQLKHSGKYVCMVKTEVDSVASAADL 505

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW 423
            V+     P +  + ++ D   A +SW
Sbjct: 506 IVRGSPGPPEHVRVDEITDT-TAQISW 531



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 164/638 (25%), Positives = 249/638 (39%), Gaps = 88/638 (13%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V  ++       ++           P   V+ PE + AA
Sbjct: 94  LYIAKVEPSDVGNYTCVVTSTVTNSQVLGSPTPLVLRTDGVMGEYEPKIEVQFPETLPAA 153

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P    P   + +     I I N ++ D G Y C
Sbjct: 154 KGSTVKLECFALGNPVPQINWRRTDGMPF---PSKIKLRKSNGMIEIPNFQQEDAGLYEC 210

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
              NS G   K++    L +   P   +  KD       T+   CR  G PKP   W+ N
Sbjct: 211 ITENSRG---KNIARGRLTYYAKPHWIQMIKDTEIAVEDTLYWDCRASGKPKPSYRWLKN 267

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
             +L+      +E G L I+++   DSG Y C A NK G    S  L  V      +  P
Sbjct: 268 GDQLSVEGRIQVENGALTISNLNLTDSGRYQCVAENKHGVIYSSAELRVVASAPDFSKNP 327

Query: 315 --EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
             +  +V+ G +  F C   + P  + S  W +G E +  E+E R     D  L +T  +
Sbjct: 328 MKKMIQVQIGSTVDFECKPKASPKARCS--WKKGGEQL-HENE-RITLLKDGGLRITNVT 383

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAV----VSWNP 425
           ++D+G YTC A  +         L V  P     APSN   + V   +  +    V  +P
Sbjct: 384 KVDAGSYTCVATNQFGTASGTTNLVVTEPTRITLAPSN---MDVTVGESVILPCQVQHDP 440

Query: 426 VSPQSLRGHFRGY-----KVQTWTEKDGEGSIRELIVNKGE---------STTTEVDKFV 471
           +   S   +F G      K  +  EK G  +  +L++   +            TEVD   
Sbjct: 441 ILDISFTWYFNGTLTDFKKDASHFEKVGGSASGDLMIRNIQLKHSGKYVCMVKTEVDSVA 500

Query: 472 PASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPN 531
            A+    R                      G PG  + +    +  +   + W +    +
Sbjct: 501 SAADLIVR----------------------GSPGPPEHVRVDEITDTTAQISWQEGTDNH 538

Query: 532 GVLMGYKIKYQ---SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
             +  Y ++ +   SV   +V      +P + D  T +  +  L P  +Y   +    K 
Sbjct: 539 SPVTAYTVQARTPFSVGWQRV----TTVPDVIDGNTFTTTVVDLNPWVEYEFRVVASNKI 594

Query: 589 GDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G G  S      +    VP   P  V G G + + LVI+W  +PE   N   F Y + +R
Sbjct: 595 GGGEPSLPSEKVRTEEAVPEIPPAEVSGGGGSRSELVITWDPIPEELQNGEGFGYVVAFR 654

Query: 643 RHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
              T   W Q  V        V  N+    F PYE+KV
Sbjct: 655 PFGT-TTWIQTVVTSPDTPRYVFRNESILPFSPYEVKV 691



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 161/688 (23%), Positives = 274/688 (39%), Gaps = 82/688 (11%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  ++   RI   N   +L I ++  +D G Y C   N  G   
Sbjct: 252 CRASGKPKPSYRWLKNGDQLSVEGRIQVEN--GALTISNLNLTDSGRYQCVAENKHGVIY 309

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           S S +L V+A AP F+  P  + I      TV FECK    P+    W   G+ + +   
Sbjct: 310 S-SAELRVVASAPDFSKNPMKKMIQVQIGSTVDFECKPKASPKARCSWKKGGEQLHENER 368

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
               K G  RIT  N+ K D G+Y C ATN  G       + V+     IT AP +    
Sbjct: 369 ITLLKDGGLRIT--NVTKVDAGSYTCVATNQFGTASGTTNL-VVTEPTRITLAPSNMDVT 425

Query: 232 DGKTVVLTCRVFGAPKPEVN--WIHN-----------QKELTGGRYTILETGDLKITDVA 278
            G++V+L C+V   P  +++  W  N             E  GG      +GDL I ++ 
Sbjct: 426 VGESVILPCQVQHDPILDISFTWYFNGTLTDFKKDASHFEKVGGS----ASGDLMIRNIQ 481

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVK------EHTHITDQPEDYEVEAGQSATFRCNAV 332
              SG+Y C  + ++ +   +  L V+      EH  + +  +     + Q  T   + V
Sbjct: 482 LKHSGKYVCMVKTEVDSVASAADLIVRGSPGPPEHVRVDEITDTTAQISWQEGTDNHSPV 541

Query: 333 SDPSLK----LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           +  +++     S+ W R        + P  +  N ++ TV   +     ++   A  ++ 
Sbjct: 542 TAYTVQARTPFSVGWQR------VTTVPDVIDGNTFTTTVVDLNPWVEYEFRVVASNKIG 595

Query: 389 FIE----AQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH-------FRG 437
             E    ++   T +   E P            + V++W+P+  +   G        FR 
Sbjct: 596 GGEPSLPSEKVRTEEAVPEIPPAEVSGGGGSRSELVITWDPIPEELQNGEGFGYVVAFRP 655

Query: 438 YKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
           +   TW +           V + ES        +P S    +V  +N    GP S + + 
Sbjct: 656 FGTTTWIQTVVTSPDTPRYVFRNES-------ILPFSPYEVKVGVYNNKGEGPFSSVTTV 708

Query: 498 VTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLE 554
            + E  P      +    L SS   + W  +  +  +G L+GY+++Y +  G +      
Sbjct: 709 FSAEEEPTVAPSGVSVTSLSSSVIEVSWKAIPWKMSSGRLLGYEVRYWNNGGKEESS--N 766

Query: 555 RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVE 609
           R+    +   TS ++ GL+ +  Y   +  Y  AG G  S  +        P + P NV 
Sbjct: 767 RVKAAGN--ETSIRITGLKSNLAYYTAVRAYNSAGAGPFSATVNATTKKTPPSQPPGNVV 824

Query: 610 GRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVL--DWRQSELVLAN 667
               T + ++++W  +  +E+ +    Y++ +R  +     N  +VL  D   +EL+L  
Sbjct: 825 WN-VTDSRVILNWEEVRAMENESEVTGYKVLYRTSSQ----NNMNVLNTDKTTAELLLQF 879

Query: 668 QPTFQPYEIKVVQTWTEKDGEGSIRELI 695
               + Y I+V  T    DG  S + LI
Sbjct: 880 N---EDYIIEVKATTEGGDGTSSDQILI 904


>gi|296225698|ref|XP_002758609.1| PREDICTED: contactin-3 [Callithrix jacchus]
          Length = 1028

 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 168/625 (26%), Positives = 266/625 (42%), Gaps = 48/625 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P   S +I    +   L I + +  D GSY 
Sbjct: 239 AAKGSTVKLECFALGNPIPQINWRRSDGLPF--SSKIKLRKFNGVLEIANFQQEDAGSYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    + +  A E+ + +EC+ASG P+P   W+ NG
Sbjct: 297 CIAENSRGKNVARG-RLTYYAKPHWVQLIKDVEIAVEDNLYWECRASGKPKPSYRWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +       R ++    +TI NL  +D+G + C A N  G VY    + V+A AP+ ++
Sbjct: 356 AALVL---EERIQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSK 412

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
            P  +      G  V L C+   +P+    W      +    R T+L+ G LKI +V  A
Sbjct: 413 NPMKKLVQVQVGSLVSLDCKPRASPRARSFWKKGDMNVQEHERITLLKDGGLKIANVTKA 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L + 
Sbjct: 473 DAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDII 532

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 533 FTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADL 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
            V+     P N  + ++ D   A +SW       +PV   S++       G++  T    
Sbjct: 593 IVRGSPGPPENVRVDEITDT-TAQLSWKEGTDNHSPVISYSIQARTPFSVGWQTIT---- 647

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 648 ----TVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S      GS S   + W  V  E  NG   GY + ++ +    V   ++ +    D 
Sbjct: 702 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPL---GVTTWIQTVVTSPDT 758

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y + +  Y   G+G  S    +F     P   P  V     + + 
Sbjct: 759 PRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSE 818

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FW 641
           + +SW  +P    N     Y + +W
Sbjct: 819 IEVSWNTIPWKLSNGHLLGYEVRYW 843



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 156/618 (25%), Positives = 239/618 (38%), Gaps = 48/618 (7%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V  A+       ++           P   V+ PE + AA
Sbjct: 181 LYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPLMLRSDGVMGEYEPKIEVQFPETLPAA 240

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P S       RK     + I N ++ D G+Y C
Sbjct: 241 KGSTVKLECFALGNPIPQINWRRSDGLPFSSKI--KLRKFN-GVLEIANFQQEDAGSYEC 297

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K+V    L +   P   +  KD        +   CR  G PKP   W+ N
Sbjct: 298 IAENSRG---KNVARGRLTYYAKPHWVQLIKDVEIAVEDNLYWECRASGKPKPSYRWLKN 354

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
              L       +E G L I++++  DSG + C A NK G    S  L  V      +  P
Sbjct: 355 GAALVLEERIQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNP 414

Query: 315 ED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
                +V+ G   +  C   + P  +    W +G   ++ +   R     D  L +   +
Sbjct: 415 MKKLVQVQVGSLVSLDCKPRASP--RARSFWKKGD--MNVQEHERITLLKDGGLKIANVT 470

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQ 429
           + D+G YTC A+ +         L V  P     APSN   + V   +  ++        
Sbjct: 471 KADAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSN---MDVSVGESVILPCQVQHDP 527

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
            L   F  Y      +   +GS  E +   G S+   + + +    +   V       + 
Sbjct: 528 LLDIIFTWYFNGALADFKKDGSHFEKV--GGSSSGDLMIRNIQLKHSGKYVCMVQTGVDS 585

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
             S     V   G PG  +++    +  +   L W +    +  ++ Y I  Q+     V
Sbjct: 586 VSSAADLIV--RGSPGPPENVRVDEITDTTAQLSWKEGTDNHSPVISYSI--QARTPFSV 641

Query: 550 G-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPF 602
           G   +  +P + D  T +A +  L P  +Y   +    K G G  S      +    VP 
Sbjct: 642 GWQTITTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
             P  V G G + + LVI+W  +PE   N   F Y + +R       W Q  V       
Sbjct: 702 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGV-TTWIQTVVTSPDTPR 760

Query: 663 LVLANQPT--FQPYEIKV 678
            V  N+    + PYE+KV
Sbjct: 761 YVFRNESIVPYSPYEVKV 778



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 166/729 (22%), Positives = 276/729 (37%), Gaps = 106/729 (14%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  +   +RI   N   +L I ++  +D G + C   N  G   
Sbjct: 339  CRASGKPKPSYRWLKNGAALVLEERIQIEN--GALTISNLSVTDSGMFQCIAENKHGLVY 396

Query: 115  SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
            S S +L V+A AP F+  P  + +       V+ +CK    P     W      + +   
Sbjct: 397  S-SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSFWKKGDMNVQEHER 455

Query: 172  NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
                K G   + I N+ K+D G Y C A N  G      ++ V+     IT AP +    
Sbjct: 456  ITLLKDG--GLKIANVTKADAGTYTCMAENQFGKANGTTHL-VVTEPTRITLAPSNMDVS 512

Query: 232  DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
             G++V+L C+V   P  ++   W  N             E  GG      +GDL I ++ 
Sbjct: 513  VGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGS----SSGDLMIRNIQ 568

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
               SG+Y C  +  + +   +  L V+                G     R + ++D + +
Sbjct: 569  LKHSGKYVCMVQTGVDSVSSAADLIVRG-------------SPGPPENVRVDEITDTTAQ 615

Query: 339  LSIVWLRGSEP----IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD------ 388
            LS  W  G++     I +  + R   S  +  T+T   E+  G+       EL+      
Sbjct: 616  LS--WKEGTDNHSPVISYSIQARTPFSVGWQ-TITTVPEVIDGKTHTATVVELNPWVEYE 672

Query: 389  --------------FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
                           + ++   T +   E P +          + V++W+PV  +   G 
Sbjct: 673  FRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGE 732

Query: 435  -------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
                   FR   V TW +           V + ES        VP S    +V  +N   
Sbjct: 733  GFGYVVAFRPLGVTTWIQTVVTSPDTPRYVFRNES-------IVPYSPYEVKVGVYNNKG 785

Query: 488  NGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSV 544
             GP S + +  + E  P    S + A  L SS   + W  +  +  NG L+GY+++Y + 
Sbjct: 786  EGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNS 845

Query: 545  KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
             G +      ++        TSA+L GL+ +  Y   +  Y  AG G  S  +       
Sbjct: 846  GGKEESSSKVKVA----GNETSARLLGLKSNLAYYTAVRAYNSAGAGPFSATVNATTKKT 901

Query: 601  -PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR--RHNTGEAWNQDDVLD 657
             P + P NV    +T   ++++W  +  +E+ +    Y++F+R    N  +  N +    
Sbjct: 902  PPSQPPGNVVWN-ATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNAQVLNTNKT-- 958

Query: 658  WRQSELVLANQPTFQPYEIKVVQTWTEKDGEGS----IRELIVNKGESTTTEVDKFVPAS 713
               +EL+L   P  + Y I+V  T    DG  S    I  +       +T+ +    P S
Sbjct: 959  --SAELLL---PIKEDYIIEVKATTDGGDGTSSEQIRIPRITNMDARGSTSAISNVHPMS 1013

Query: 714  KNFARVLAF 722
                 VL F
Sbjct: 1014 SYMPIVLFF 1022



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 147/376 (39%), Gaps = 32/376 (8%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFSDQGSY 102
           V   +KK+ L C   G P P   W  +G  I+   +   + N G  L+I      D G+Y
Sbjct: 39  VGSEDKKITLNCEARGNPSPHYRWQLNGSDIDTKMEHHYKLNGGNLLVINPNRNWDAGTY 98

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEI 157
            C  +N +G   S    L       F T     ++  E + V   C   G P    E   
Sbjct: 99  QCFATNSLGTIVSREAKLQFAYLDNFKTKMRSTVSVREGQGVVLLC---GPPPHSGELSY 155

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LG----- 204
            W+ N  P S    + RR V      + I  +  SD GNY C  T+       LG     
Sbjct: 156 AWIFNEYP-SFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPL 214

Query: 205 YVYKDVYVNVLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGR 263
            +  D  +    + P+I  + P+      G TV L C   G P P++NW  +       +
Sbjct: 215 MLRSDGVMG--EYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSK 272

Query: 264 YTILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAG 322
             + +  G L+I +    D+G Y C A N  G     G LT     H     +D E+   
Sbjct: 273 IKLRKFNGVLEIANFQQEDAGSYECIAENSRGKNVARGRLTYYAKPHWVQLIKDVEIAVE 332

Query: 323 QSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCR 382
            +  + C A   P  K S  WL+    +  E     +Q  + +LT++  S  DSG + C 
Sbjct: 333 DNLYWECRASGKP--KPSYRWLKNGAALVLEER---IQIENGALTISNLSVTDSGMFQCI 387

Query: 383 AQTELDFIEAQATLTV 398
           A+ +   + + A L V
Sbjct: 388 AENKHGLVYSSAELKV 403



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 123/300 (41%), Gaps = 32/300 (10%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +E++ +T  C+A G P P   W  NG  I     +  +  G
Sbjct: 22  LLQGPVFIKEPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDIDTKMEHHYKLNG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N + I   R  D G Y C ATNSLG +         A+        +   +V +G+ VV
Sbjct: 82  GNLLVINPNRNWDAGTYQCFATNSLGTIVSREAKLQFAYLDNFKTKMRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        WI N+     E    R+   ETG L I+ V  +D G YTC 
Sbjct: 142 LLC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCV 197

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
             + +  A+  GS   L ++    + +         PE      G +    C A+ +P  
Sbjct: 198 VTSMVTNARVLGSPTPLMLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +++  W R S+ + F S+ +  + N   L +    + D+G Y C A+       A+  LT
Sbjct: 258 QIN--WRR-SDGLPFSSKIKLRKFNGV-LEIANFQQEDAGSYECIAENSRGKNVARGRLT 313


>gi|134085228|emb|CAM60094.1| nadl1.1 [Danio rerio]
          Length = 1125

 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 182/390 (46%), Gaps = 9/390 (2%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           R   + LR + + L CI  G P P+  W +    ++P +R  +    + L I +V  SD 
Sbjct: 254 RSSYLVLRGQTLTLECIPEGLPTPEVHWDRIDSALSP-NRTKKLYNNRWLQIDNVLESDD 312

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHW 159
           G Y C   N     K +   ++V AAPY+T  PE    A  ETV  +C+A G+P P I W
Sbjct: 313 GEYVCTARNSENSVKHH-YTVTVEAAPYWTRRPEEHLYAPGETVRLDCQADGIPAPNITW 371

Query: 160 VHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
             NG P+S    +PRR+V   ++ + N+  SDT  Y C A N  G +  + +V+++    
Sbjct: 372 SINGVPVSGTDVDPRRRVSSGKLILSNVEFSDTAVYQCEAVNKHGSILINTHVHIVELPA 431

Query: 220 EITEAPKDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITD 276
           +I    +  Y    G+TV+L CR FG+P P+++W  + +   L+  + + +  G LKI++
Sbjct: 432 QILTPDERLYQATAGQTVMLDCRTFGSPLPKIHWEILDSIPALSNAKISQMTNGSLKISN 491

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
           V+  DS  YTC       +   S  L V   T I   P++  V  G  A   C    D +
Sbjct: 492 VSEEDSNRYTCSVSETNKSI--SAELEVLNRTKIVGPPQNLHVIRGSDAILHCKYTVDHN 549

Query: 337 LKLSIV-WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
           LK   V W +    I   +        + SL V      D G Y+C   T LD   A   
Sbjct: 550 LKSPTVQWKKDGHKITASTSNDKYHEIEGSLKVLDVQMEDMGIYSCEVSTTLDSDTASGY 609

Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           +TVQ   + P +  L + ++ +   +SW P
Sbjct: 610 ITVQDKPDPPQSLKLSEKME-RSVTISWMP 638



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 156/565 (27%), Positives = 243/565 (43%), Gaps = 63/565 (11%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNA 199
           +T+T EC   GLP PE+HW      +S   PN  +K+  NR + I+N+ +SD G Y C A
Sbjct: 263 QTLTLECIPEGLPTPEVHWDRIDSALS---PNRTKKLYNNRWLQIDNVLESDDGEYVCTA 319

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL 259
            NS   V     V V A AP  T  P++     G+TV L C+  G P P + W  N   +
Sbjct: 320 RNSENSVKHHYTVTVEA-APYWTRRPEEHLYAPGETVRLDCQADGIPAPNITWSINGVPV 378

Query: 260 TGGRYT---ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           +G        + +G L +++V F+D+  Y C A NK       GS+ +  H HI + P  
Sbjct: 379 SGTDVDPRRRVSSGKLILSNVEFSDTAVYQCEAVNK------HGSILINTHVHIVELPAQ 432

Query: 317 --------YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                   Y+  AGQ+    C     P  K+    L   + I   S  +  Q  + SL +
Sbjct: 433 ILTPDERLYQATAGQTVMLDCRTFGSPLPKIHWEIL---DSIPALSNAKISQMTNGSLKI 489

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAP-SNFTLIQVIDA---KKAVVSWN 424
           +  SE DS +YTC        I A+  +  +  +  P  N  +I+  DA    K  V  N
Sbjct: 490 SNVSEEDSNRYTCSVSETNKSISAELEVLNRTKIVGPPQNLHVIRGSDAILHCKYTVDHN 549

Query: 425 PVSPQSLRGHFRGYKVQTWTEKDG----EGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
             SP +++    G+K+   T  D     EGS++ L V        +++     S   +  
Sbjct: 550 LKSP-TVQWKKDGHKITASTSNDKYHEIEGSLKVLDV--------QMEDMGIYSCEVSTT 600

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
           L  + A          ++T +  P   QSL+       +  + W+   + N  +  Y I+
Sbjct: 601 LDSDTASG--------YITVQDKPDPPQSLKLSEKMERSVTISWMPSVENNSPVTEYVIE 652

Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-LFY 599
               +    G   +   Y S           L+P +KY   +      G  A S++ L Y
Sbjct: 653 MNEGETPDEGQWQK---YRSVSQDIRQLEIHLQPYSKYHFQIRAVNSIGTSAPSEFSLSY 709

Query: 600 V-----PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR-HNTGEAWNQD 653
                 P +NP+NV    + P +++ISW  M   + N P F+Y++FWRR  ++G  W + 
Sbjct: 710 SIPAAKPDRNPENVMTLSTDPKSMIISWQEMDRRQFNGPGFQYKVFWRRAADSGAHWTES 769

Query: 654 DVLDWRQSELVLANQPTFQPYEIKV 678
            V       L++ N  TF  +EIKV
Sbjct: 770 SV---SNPPLLVNNTGTFVSFEIKV 791



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 103/232 (44%), Gaps = 24/232 (10%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            +  + Q   D   A   LTV        PLEAPS  ++ + +     +V W+PV P+S+R
Sbjct: 787  FEIKVQAVNDLGAAPEPLTVIGYSGEDFPLEAPSALSVTE-LQKTSVMVRWSPVRPESVR 845

Query: 433  GHFRGYKVQTWTEKD------------GEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
            GH  GYK+    +              G  ++ E+  +  E   +++  +   S     +
Sbjct: 846  GHLLGYKIYLRMKGPSGRLRAGRSPAVGNPTVIEVPADAAEKIVSDLQYY---SDYTLTI 902

Query: 481  LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
             AFN    GP SE  SF TPEG PG V  L       S   L+W  P +PNG + GY ++
Sbjct: 903  TAFNSKGEGPHSEESSFSTPEGAPGPVLFLPFDSPSESEITLRWEAPHKPNGEIRGYLLQ 962

Query: 541  YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 592
            YQ V      P  + +  I  P  T   L  L P ++Y  HL+    AGDGA
Sbjct: 963  YQEVVIGSESP--QHVESIDLPAVTEFTLKNLNPESRYTFHLSARNSAGDGA 1012



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 142/353 (40%), Gaps = 28/353 (7%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
           V L C   G P P   W KDG      + +S+           + F  QG+Y C  +N +
Sbjct: 67  VNLACEASGDPSPSFRWVKDGKQFG--EVLSESGTLTPHPTMDLHFY-QGTYRCYAANEL 123

Query: 111 GEAKSYSIDLSVLAAPYFTVEPEFINAAEE--ETVTFECK-ASGLPEPEIHWVHNGKPIS 167
           G A S  + L+    P      +    A E  E+    C        P+IHW+       
Sbjct: 124 GTAVSNLVHLTTEPVPSLAKVKKQKRRAYEVGESAVLRCNPPKSSVTPKIHWM--DMQFH 181

Query: 168 QAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNA--TNSLGYVYKD---VYV-------- 212
             P N R  +  +  +   NL  +D+  +Y CNA   N+   + K+   +YV        
Sbjct: 182 HIPLNERVTISRDGNLYFANLIANDSRDDYTCNAHYINASIILPKEPMSIYVTPSNSVVK 241

Query: 213 NVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD- 271
           N  A       A      + G+T+ L C   G P PEV+W      L+  R   L     
Sbjct: 242 NRRAKLHHPAGARSSYLVLRGQTLTLECIPEGLPTPEVHWDRIDSALSPNRTKKLYNNRW 301

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
           L+I +V  +D GEY C ARN   + +   ++TV+   + T +PE++    G++    C A
Sbjct: 302 LQIDNVLESDDGEYVCTARNSENSVKHHYTVTVEAAPYWTRRPEEHLYAPGETVRLDCQA 361

Query: 332 VSDPSLKLSIVWLRGSEPID-FESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
              P+   +I W     P+   + +PR   S+   L ++     D+  Y C A
Sbjct: 362 DGIPA--PNITWSINGVPVSGTDVDPRRRVSSG-KLILSNVEFSDTAVYQCEA 411



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 117/301 (38%), Gaps = 40/301 (13%)

Query: 125 APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
           AP FT +P    A   + V   C+ASG P P   WV +GK   +   +    + P+    
Sbjct: 49  APEFTTQPVSHTAFSLDDVNLACEASGDPSPSFRWVKDGKQFGEV-LSESGTLTPHPTMD 107

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE---YTVDGKTVVLTCR 241
            +  +   G Y C A N LG    ++        P + +  K +   Y V G++ VL C 
Sbjct: 108 LHFYQ---GTYRCYAANELGTAVSNLVHLTTEPVPSLAKVKKQKRRAYEV-GESAVLRC- 162

Query: 242 VFGAPK----PEVNWIHNQKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA----- 289
               PK    P+++W+  Q        R TI   G+L   ++   DS  +YTC A     
Sbjct: 163 --NPPKSSVTPKIHWMDMQFHHIPLNERVTISRDGNLYFANLIANDSRDDYTCNAHYINA 220

Query: 290 -----RNKLGTAQGSGSLTVKEHTHITDQP----EDYEVEAGQSATFRCNAVSDPSLKLS 340
                +  +       +  VK        P      Y V  GQ+ T  C     P+ +  
Sbjct: 221 SIILPKEPMSIYVTPSNSVVKNRRAKLHHPAGARSSYLVLRGQTLTLECIPEGLPTPE-- 278

Query: 341 IVWLRGSEPIDFESEPRFVQS--NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           + W R    ID    P   +   N+  L +    E D G+Y C A+   + ++   T+TV
Sbjct: 279 VHWDR----IDSALSPNRTKKLYNNRWLQIDNVLESDDGEYVCTARNSENSVKHHYTVTV 334

Query: 399 Q 399
           +
Sbjct: 335 E 335



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 72/193 (37%), Gaps = 33/193 (17%)

Query: 209 DVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE 268
           D   N L  APE T  P          V L C   G P P   W+ + K+       + E
Sbjct: 40  DYTYNKLKQAPEFTTQPVSHTAFSLDDVNLACEASGDPSPSFRWVKDGKQFGE---VLSE 96

Query: 269 TGDLK---ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----------E 315
           +G L      D+ F   G Y C+A N+LGTA       V    H+T +P          +
Sbjct: 97  SGTLTPHPTMDLHFYQ-GTYRCYAANELGTA-------VSNLVHLTTEPVPSLAKVKKQK 148

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP---RFVQSNDYSLTVTKSS 372
               E G+SA  RCN     S+   I W+     + F   P   R   S D +L      
Sbjct: 149 RRAYEVGESAVLRCNPPKS-SVTPKIHWMD----MQFHHIPLNERVTISRDGNLYFANLI 203

Query: 373 ELDS-GQYTCRAQ 384
             DS   YTC A 
Sbjct: 204 ANDSRDDYTCNAH 216


>gi|114587894|ref|XP_526232.2| PREDICTED: contactin-3 isoform 3 [Pan troglodytes]
 gi|410212392|gb|JAA03415.1| contactin 3 (plasmacytoma associated) [Pan troglodytes]
 gi|410251446|gb|JAA13690.1| contactin 3 (plasmacytoma associated) [Pan troglodytes]
 gi|410291610|gb|JAA24405.1| contactin 3 (plasmacytoma associated) [Pan troglodytes]
 gi|410329979|gb|JAA33936.1| contactin 3 (plasmacytoma associated) [Pan troglodytes]
          Length = 1028

 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 167/625 (26%), Positives = 267/625 (42%), Gaps = 48/625 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P   S +I    +   L I + +  D GSY 
Sbjct: 239 AAKGSTVKLECFALGNPIPQINWRRSDGLPF--SSKIKLRKFSGVLEIPNFQQEDAGSYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    + +  A E+++ +EC+ASG P+P   W+ NG
Sbjct: 297 CIAENSRGKNVARG-RLTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYRWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +       R ++    +TI NL  +D+G + C A N  G VY    + V+A AP+ ++
Sbjct: 356 AALVL---EERTQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSK 412

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
            P  +      G  V L C+   +P+   +W      +    R ++L  G LKI +V  A
Sbjct: 413 NPMKKLVQVQVGSLVSLDCKPRASPRARSSWKKGDVSVQEHERISLLNDGGLKIANVTKA 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L + 
Sbjct: 473 DAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDII 532

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 533 FTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADL 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
            V+     P N  + ++ D   A +SW       +PV   S++       G++  T    
Sbjct: 593 IVRGSPGPPENVKVDEITDT-TAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT---- 647

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 648 ----TVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S      GS S   + W  V  E  NG   GY + ++ +    V   ++ +    D 
Sbjct: 702 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPL---GVTTWIQTVVTSPDT 758

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y + +  Y   G+G  S    +F     P   P  V     + + 
Sbjct: 759 PRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSE 818

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FW 641
           + +SW  +P    N     Y + +W
Sbjct: 819 IEVSWNTIPWKLSNGHLLGYEVRYW 843



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 157/618 (25%), Positives = 244/618 (39%), Gaps = 48/618 (7%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V  A+       ++           P   V+ PE + AA
Sbjct: 181 LYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 240

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P S      + +     + I N ++ D G+Y C
Sbjct: 241 KGSTVKLECFALGNPIPQINWRRSDGLPFSS---KIKLRKFSGVLEIPNFQQEDAGSYEC 297

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K+V    L +   P   +  KD       ++   CR  G PKP   W+ N
Sbjct: 298 IAENSRG---KNVARGRLTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYRWLKN 354

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
              L     T +E G L I++++  DSG + C A NK G    S  L  V      +  P
Sbjct: 355 GAALVLEERTQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNP 414

Query: 315 ED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
                +V+ G   +  C   + P  + S  W +G   +  +   R    ND  L +   +
Sbjct: 415 MKKLVQVQVGSLVSLDCKPRASPRARSS--WKKGD--VSVQEHERISLLNDGGLKIANVT 470

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQ 429
           + D+G YTC A+ +         L V  P     APSN   + V   +  ++        
Sbjct: 471 KADAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSN---MDVSVGESVILPCQVQHDP 527

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
            L   F  Y      +   +GS  E +   G S+   + + +    +   V       + 
Sbjct: 528 LLDIIFTWYFNGALADFKKDGSHFEKV--GGSSSGDLMIRNIQLKHSGKYVCMVQTGVDS 585

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
             S     V   G PG  ++++   +  +   L W + +  +  ++ Y I  Q+     V
Sbjct: 586 VSSAADLIV--RGSPGPPENVKVDEITDTTAQLSWKEGKDNHSPVISYSI--QARTPFSV 641

Query: 550 G-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPF 602
           G   +  +P + D  T +A +  L P  +Y   +    K G G  S      +    VP 
Sbjct: 642 GWQTVTTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
             P  V G G + + LVI+W  +PE   N   F Y + +R       W Q  V       
Sbjct: 702 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGV-TTWIQTVVTSPDTPR 760

Query: 663 LVLANQPT--FQPYEIKV 678
            V  N+    + PYE+KV
Sbjct: 761 YVFRNESIVPYSPYEVKV 778



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 166/727 (22%), Positives = 274/727 (37%), Gaps = 106/727 (14%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  +   +R    N   +L I ++  +D G + C   N  G   
Sbjct: 339  CRASGKPKPSYRWLKNGAALVLEERTQIEN--GALTISNLSVTDSGMFQCIAENKHGLVY 396

Query: 115  SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
            S S +L V+A AP F+  P  + +       V+ +CK    P     W      + +   
Sbjct: 397  S-SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSWKKGDVSVQEHER 455

Query: 172  NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
                  G   + I N+ K+D G Y C A N  G      ++ V+     IT AP +    
Sbjct: 456  ISLLNDG--GLKIANVTKADAGTYTCMAENQFGKANGTTHL-VVTEPTRITLAPSNMDVS 512

Query: 232  DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
             G++V+L C+V   P  ++   W  N             E  GG      +GDL I ++ 
Sbjct: 513  VGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGS----SSGDLMIRNIQ 568

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
               SG+Y C  +  + +   +  L V+                G     + + ++D + +
Sbjct: 569  LKHSGKYVCMVQTGVDSVSSAADLIVRG-------------SPGPPENVKVDEITDTTAQ 615

Query: 339  LSIVWLRG----SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD------ 388
            LS  W  G    S  I +  + R   S  +  TVT   E+  G+       EL+      
Sbjct: 616  LS--WKEGKDNHSPVISYSIQARTPFSVGWQ-TVTTVPEVIDGKTHTATVVELNPWVEYE 672

Query: 389  --------------FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
                           + ++   T +   E P +          + V++W+PV  +   G 
Sbjct: 673  FRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGE 732

Query: 435  -------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
                   FR   V TW +           V + ES        VP S    +V  +N   
Sbjct: 733  GFGYVVAFRPLGVTTWIQTVVTSPDTPRYVFRNES-------IVPYSPYEVKVGVYNNKG 785

Query: 488  NGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSV 544
             GP S + +  + E  P    S + A  L SS   + W  +  +  NG L+GY+++Y + 
Sbjct: 786  EGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNG 845

Query: 545  KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
             G +      ++        TSA+L GL+ +  Y   +  Y  AG G  S  +       
Sbjct: 846  GGKEESSSKMKVA----GNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSATVNVTTKKT 901

Query: 601  -PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
             P + P NV    +T   ++++W  +  +E+ +    Y++F+R  +     N   VL+  
Sbjct: 902  PPSQPPGNVVWN-ATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQ----NNVQVLNTN 956

Query: 660  Q--SELVLANQPTFQPYEIKVVQTWTEKDGEGS----IRELIVNKGESTTTEVDKFVPAS 713
            +  +ELVL   P  + Y I+V  T    DG  S    I  +       +T+ +    P S
Sbjct: 957  KTSAELVL---PIKEDYIIEVKATTDGGDGTSSEQIRIPRITSMDARGSTSAISNVHPMS 1013

Query: 714  KNFARVL 720
                 VL
Sbjct: 1014 SYMPIVL 1020



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 147/374 (39%), Gaps = 28/374 (7%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFSDQGSY 102
           V   +KK+ L C   G P P   W  +G  I+ S +   + N G  ++I      D G+Y
Sbjct: 39  VGSEDKKITLNCEARGNPSPHYRWQLNGSDIDMSMEHRYKLNGGNLVVINPNRNWDTGTY 98

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEI 157
            C  +N +G   S    L       F T     ++  E + V   C   G P    E   
Sbjct: 99  QCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLC---GPPPHSGELSY 155

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDVYVN 213
            W+ N  P S    + RR V      + I  +  SD GNY C  T+ +    V       
Sbjct: 156 AWIFNEYP-SFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPL 214

Query: 214 VL-------AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           VL        + P+I  + P+      G TV L C   G P P++NW  +       +  
Sbjct: 215 VLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIK 274

Query: 266 ILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
           + + +G L+I +    D+G Y C A N  G     G LT     H     +D E+    S
Sbjct: 275 LRKFSGVLEIPNFQQEDAGSYECIAENSRGKNVARGRLTYYAKPHWVQLIKDVEIAVEDS 334

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             + C A   P  K S  WL+    +  E      Q  + +LT++  S  DSG + C A+
Sbjct: 335 LYWECRASGKP--KPSYRWLKNGAALVLEER---TQIENGALTISNLSVTDSGMFQCIAE 389

Query: 385 TELDFIEAQATLTV 398
            +   + + A L V
Sbjct: 390 NKHGLVYSSAELKV 403



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 125/300 (41%), Gaps = 32/300 (10%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +E++ +T  C+A G P P   W  NG  I  +  +  +  G
Sbjct: 22  LLQGPVFIKEPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDIDMSMEHRYKLNG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N + I   R  DTG Y C ATNSLG +         A+        +   +V +G+ VV
Sbjct: 82  GNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        WI N+     E    R+   ETG L I+ V  +D G YTC 
Sbjct: 142 LLC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCV 197

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
             + +  A+  GS   L ++    + +         PE      G +    C A+ +P  
Sbjct: 198 VTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +++  W R S+ + F S+ +  + +   L +    + D+G Y C A+       A+  LT
Sbjct: 258 QIN--WRR-SDGLPFSSKIKLRKFSGV-LEIPNFQQEDAGSYECIAENSRGKNVARGRLT 313


>gi|307206268|gb|EFN84333.1| Protein sidekick [Harpegnathos saltator]
          Length = 2141

 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 160/606 (26%), Positives = 260/606 (42%), Gaps = 50/606 (8%)

Query: 53  LFCIFGGTPLPQ--TIWSKDGVPINPSDRIS---QGNYGKSLIIKHVEFSDQGSYTCEVS 107
           ++CI     L +   +W KDG+PI  S R++     ++ ++L++     +  G+Y+C V 
Sbjct: 215 MYCIANARALHELRILWMKDGIPIENS-RVAYSFNDSWNRTLMLISANMTYTGTYSCHVD 273

Query: 108 --NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEE-ETVTFECKASGLPEPEIHWVHNGK 164
             +G     S S +++V   P F  E +    ++   TVT  C   G P P+I W  N +
Sbjct: 274 LKSGGYPTLSASAEVTVYEKPTFNTELKKETLSDYGSTVTLSCDVDGTPVPKITWFRNAE 333

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            +     +         +TI+ L   D+G + C A+N  G      ++      P +   
Sbjct: 334 SVGNLKESRYVIEQDGSLTIKKLTMDDSGMFQCLASNEAGEASSYTWLRAKTSKPIMENG 393

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT--GGRYTILETGDLKITDVAFADS 282
           P++   +DGK   L+C    APKP   W +N   L    GR  +L+ GDL I  V   D+
Sbjct: 394 PQNLTVLDGKDATLSCNAVAAPKPNTTWYYNDTILVEIAGRVQVLDNGDLLIAAVKPNDA 453

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G+YTC   N+ G+  GSG LTV   T I   P D  V  GQ+A  +C+ V+DPS+   + 
Sbjct: 454 GKYTCIRANEAGSVNGSGLLTVMVRTRIVQPPVDTSVLLGQTAKLQCSVVNDPSVVYDMA 513

Query: 343 WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV-QVP 401
           W   ++ I+ ++  R    +D +L +      D G+Y C   +        A L+V ++P
Sbjct: 514 WFHNAQVINTQASQRVKMRHDGTLEIVAVRASDVGEYMCSVVSPGGNETRSARLSVIELP 573

Query: 402 LEAPSNF--TLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGEGSIRELIV 457
             AP N   T ++ I  +   V+W P       G+   + + V+   E      I + +V
Sbjct: 574 F-APINVVATRVERISPRTINVTWVP----GFDGNSPTKKFTVEK-REVSDSAPISDSLV 627

Query: 458 N--------KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVP 504
           N          ++    +     A+    RV A N    G  SE  + V      P G P
Sbjct: 628 NWDIVCNNVSADTRWVLLSNLKAAAAYQFRVYAENSVGKGMSSEPSNIVVLPQEPPSGPP 687

Query: 505 -GTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
            G V S  +    SS    +W  P  E  NG ++GY ++Y+ + G  V P + +   I++
Sbjct: 688 VGFVGSARS----SSEIITQWQLPLEEYRNGHILGYILRYR-LFGYSVNPWMTQ--NITN 740

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAG-----DGAESKYLFYVPFKNPDNVEGRGSTPN 616
               +  +  L     Y + +A Y   G     DG + K    VP   P NV+       
Sbjct: 741 EAQRNYLITDLITWKDYEVQIAAYNDKGVGVFTDGLKIKTKEGVPEAPPTNVKAEAVNST 800

Query: 617 NLVISW 622
            + + W
Sbjct: 801 AVKVWW 806



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 141/599 (23%), Positives = 230/599 (38%), Gaps = 61/599 (10%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVE 95
           +K+ ++     V L C   GTP+P+  W ++   +     + +  Y      SL IK + 
Sbjct: 301 KKETLSDYGSTVTLSCDVDGTPVPKITWFRNAESVG---NLKESRYVIEQDGSLTIKKLT 357

Query: 96  FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEP 155
             D G + C  SN  GEA SY+   +  + P     P+ +   + +  T  C A   P+P
Sbjct: 358 MDDSGMFQCLASNEAGEASSYTWLRAKTSKPIMENGPQNLTVLDGKDATLSCNAVAAPKP 417

Query: 156 EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
              W +N   + +     R +V  N  + I  ++ +D G Y C   N  G V     + V
Sbjct: 418 NTTWYYNDTILVEIA--GRVQVLDNGDLLIAAVKPNDAGKYTCIRANEAGSVNGSGLLTV 475

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKEL---TGGRYTILET 269
           +     I + P D   + G+T  L C V   P    ++ W HN + +      R  +   
Sbjct: 476 MVRT-RIVQPPVDTSVLLGQTAKLQCSVVNDPSVVYDMAWFHNAQVINTQASQRVKMRHD 534

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I  V  +D GEY C   +  G    S  L+V E            VE     T   
Sbjct: 535 GTLEIVAVRASDVGEYMCSVVSPGGNETRSARLSVIELPFAPINVVATRVERISPRTINV 594

Query: 330 NAV-----SDPSLKLSI--VWLRGSEPIDFESEPRFVQSNDYSLT---VTKSSELDSGQY 379
             V     + P+ K ++    +  S PI        +  N+ S     V  S+   +  Y
Sbjct: 595 TWVPGFDGNSPTKKFTVEKREVSDSAPISDSLVNWDIVCNNVSADTRWVLLSNLKAAAAY 654

Query: 380 TCRAQTELDF---IEAQATLTVQVPLEAPSNFTLIQVIDAKKA---VVSWNPVSPQSLRG 433
             R   E      + ++ +  V +P E PS   +  V  A+ +   +  W     +   G
Sbjct: 655 QFRVYAENSVGKGMSSEPSNIVVLPQEPPSGPPVGFVGSARSSSEIITQWQLPLEEYRNG 714

Query: 434 HFR---------GYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN 484
           H           GY V  W  ++        I N+ +      D  +       ++ A+N
Sbjct: 715 HILGYILRYRLFGYSVNPWMTQN--------ITNEAQRNYLITD-LITWKDYEVQIAAYN 765

Query: 485 GAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWV--KPEQPNGVLMGYKIKY 541
               G  ++ +   T EGVP     +++A  + S+A  + W    P++ NG+  GYK+  
Sbjct: 766 DKGVGVFTDGLKIKTKEGVPEAPPTNVKAEAVNSTAVKVWWKPPNPQKINGINQGYKL-- 823

Query: 542 QSVKGTKVGPLLERL-----PYISDPTT-TSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           Q+  G  +    E       P + DP    SA + GL   T Y I +  +T  GDG  S
Sbjct: 824 QAWIGNVLTEATEYKSMTVPPSLFDPLAEQSAVMTGLRKYTSYNITVLCFTDPGDGERS 882



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 119/275 (43%), Gaps = 23/275 (8%)

Query: 123 LAAPYFTVEPEFIN--AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN 180
           L  P F ++P       +E  T   +C+A G P+P+  W  + + +S      R  + P 
Sbjct: 3   LLEPRFIIQPSNSGNILSENRTKILQCQARGNPQPKYTWFKDWQAVS------RPNIAPG 56

Query: 181 RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLT 239
              I++ R+ DTG Y C ATN +G ++ D     +A+  +  +      TV+ G   VL 
Sbjct: 57  SFRIQSTRRKDTGVYHCVATNDVGSIFSDRIAFSVAYMGKFDDLTDRVVTVEYGNAAVLE 116

Query: 240 C-RVFGAPKPEVNWIHNQ-KELTGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTA 296
              +   P P V+W  +   EL G +Y   +   L I D   +D G Y   A N +LG  
Sbjct: 117 LPPIESNPSPGVSWFSSDGTELYGRKYATTD-HKLFILDAMKSDEGSYRARAFNTQLGKE 175

Query: 297 QGS--------GSLTVKEHTHITDQPEDYEVEAGQSAT-FRCNAVSDPSLKLSIVWLRGS 347
           + S        G    +    I  +P+D  +   Q+A    C A +    +L I+W++  
Sbjct: 176 ENSPFFKLQVTGDPNAEVAPSIIVKPQDTLIIKDQNAAHMYCIANARALHELRILWMKDG 235

Query: 348 EPIDFESEP-RFVQSNDYSLTVTKSSELDSGQYTC 381
            PI+       F  S + +L +  ++   +G Y+C
Sbjct: 236 IPIENSRVAYSFNDSWNRTLMLISANMTYTGTYSC 270



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 104/410 (25%), Positives = 159/410 (38%), Gaps = 48/410 (11%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           N+   L C   G P P+  W KD   ++  + I+ G    S  I+     D G Y C  +
Sbjct: 22  NRTKILQCQARGNPQPKYTWFKDWQAVSRPN-IAPG----SFRIQSTRRKDTGVYHCVAT 76

Query: 108 NGVGEAKSYSIDLSVLAAPYF------TVEPEFINAAEEETVTFECKASGLPEPEIHWV- 160
           N VG   S  I  SV     F       V  E+ NAA  E    E      P P + W  
Sbjct: 77  NDVGSIFSDRIAFSVAYMGKFDDLTDRVVTVEYGNAAVLELPPIESN----PSPGVSWFS 132

Query: 161 HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS-LGYVYKDVYVNVLAH-- 217
            +G  +       +     +++ I +  KSD G+Y   A N+ LG      +  +     
Sbjct: 133 SDGTELYGR----KYATTDHKLFILDAMKSDEGSYRARAFNTQLGKEENSPFFKLQVTGD 188

Query: 218 -----APEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVN--WIHNQKELTGGR--YTIL 267
                AP I   P+D   + D     + C        E+   W+ +   +   R  Y+  
Sbjct: 189 PNAEVAPSIIVKPQDTLIIKDQNAAHMYCIANARALHELRILWMKDGIPIENSRVAYSFN 248

Query: 268 ETGD--LKITDVAFADSGEYTCFARNKLG---TAQGSGSLTVKEH-THITDQPEDYEVEA 321
           ++ +  L +       +G Y+C    K G   T   S  +TV E  T  T+  ++   + 
Sbjct: 249 DSWNRTLMLISANMTYTGTYSCHVDLKSGGYPTLSASAEVTVYEKPTFNTELKKETLSDY 308

Query: 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTC 381
           G + T  C+    P  K  I W R +E +    E R+V   D SLT+ K +  DSG + C
Sbjct: 309 GSTVTLSCDVDGTPVPK--ITWFRNAESVGNLKESRYVIEQDGSLTIKKLTMDDSGMFQC 366

Query: 382 RAQTEL----DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVS 427
            A  E      +   +A  +  +    P N T   V+D K A +S N V+
Sbjct: 367 LASNEAGEASSYTWLRAKTSKPIMENGPQNLT---VLDGKDATLSCNAVA 413



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 28/204 (13%)

Query: 403 EAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGE- 461
           EAP      + +++    V W P +PQ + G  +GYK+Q W        I  ++    E 
Sbjct: 786 EAPPTNVKAEAVNSTAVKVWWKPPNPQKINGINQGYKLQAW--------IGNVLTEATEY 837

Query: 462 -STTTEVDKFVPASKNFA-------------RVLAFNGAYNGPPSEIISFVTPEGVPGTV 507
            S T     F P ++  A              VL F    +G  S  +   T E VP  V
Sbjct: 838 KSMTVPPSLFDPLAEQSAVMTGLRKYTSYNITVLCFTDPGDGERSLPVEVRTREDVPEEV 897

Query: 508 QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSA 567
           ++L+   +   A  +KW  P++ NG+L  Y++KY  +K  ++   L+   + +D    S 
Sbjct: 898 ENLQFDDISDRALTVKWGPPKETNGILTHYQLKYM-IK--EIPDSLQVKNFTAD--VLST 952

Query: 568 KLAGLEPSTKYRIHLAGYTKAGDG 591
           K+  L+  T Y+  +A +T  G G
Sbjct: 953 KVEHLQAMTHYKFEVAAWTSVGPG 976



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 16/212 (7%)

Query: 480  VLAFNGAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWVKPE--QPNGVLMG 536
            VL FN    GP S  ++    E VP G  Q L+A P+ S+  +L+W  P+    NG L+G
Sbjct: 1573 VLPFNSEGEGPLSPPVTVYVGEAVPTGEPQHLKADPISSTEVHLRWKPPQANMQNGDLLG 1632

Query: 537  YKIKYQSVKG-TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK 595
            YKI Y       ++    E    +   +  +  L  L+  T+YRI +  +  AGDG  S+
Sbjct: 1633 YKIFYLVTDSPQQLEKKQEEEIEVVPASCLAHSLVFLDKYTEYRIQVLAFNPAGDGPRSR 1692

Query: 596  YLFYVPFKN----PDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWN 651
             +     ++    P N++    T  +L +SW   P    N     Y +      T E   
Sbjct: 1693 PITVRTKQDIPGPPYNLQFTEITMTSLRVSWE--PPKLRNGEIIGYIV------TYETAE 1744

Query: 652  QDDVLDWRQSELVLANQPTFQPYEIKVVQTWT 683
            Q+D    +  + V       QP E +V  T+T
Sbjct: 1745 QNDRFSKQVKQKVNETSLLIQPLEEEVTYTFT 1776



 Score = 45.8 bits (107), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 10/139 (7%)

Query: 414  IDAKKAVVSWNPVSPQSLRGHFRGYKV-------QTWTEKDGEGSIRELIVNKGESTTTE 466
            I + +  + W P       G   GYK+           EK  E  I  +  +    +   
Sbjct: 1609 ISSTEVHLRWKPPQANMQNGDLLGYKIFYLVTDSPQQLEKKQEEEIEVVPASCLAHSLVF 1668

Query: 467  VDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVK 526
            +DK+   ++   +VLAFN A +GP S  I+  T + +PG   +L+   +  ++  + W  
Sbjct: 1669 LDKY---TEYRIQVLAFNPAGDGPRSRPITVRTKQDIPGPPYNLQFTEITMTSLRVSWEP 1725

Query: 527  PEQPNGVLMGYKIKYQSVK 545
            P+  NG ++GY + Y++ +
Sbjct: 1726 PKLRNGEIIGYIVTYETAE 1744



 Score = 42.7 bits (99), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 83/205 (40%), Gaps = 17/205 (8%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N        +   VV W  V  +   G   G+KV            + +  N 
Sbjct: 1190 VPSLGPANVE-ANATSSTTIVVRWGDVPVEHQNGQIDGFKVYYGANSRSPFQYKNIPSNT 1248

Query: 460  GESTTT-EVDKFVPASKNFARVLAF----NGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
              +TT  E+ KFV   +   +VLA+    +GA + PP  + +F   E  PG   ++    
Sbjct: 1249 TFTTTLTELRKFV---QYHVQVLAYTRLGDGALSVPPVRVQTF---EDAPGPPSNVSFPD 1302

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
            +  +   + W  PE PNG +  YK+ +  +   +     +  P  SD T T+    GLEP
Sbjct: 1303 VSFTTARIIWDTPEDPNGEIFAYKVVFH-LNSNQDRQFSKEFP-ASDRTFTA---TGLEP 1357

Query: 575  STKYRIHLAGYTKAGDGAESKYLFY 599
               Y   +   T+ G G  +  L +
Sbjct: 1358 EKYYMFSVTAQTRLGWGKTAYALVF 1382



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 24/199 (12%)

Query: 457  VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-IISFVTPEGVPG------TVQS 509
            V+  ++ T  VD   P ++   R++A N      PSE    F T +  P       TV++
Sbjct: 1043 VSDPDACTVTVDGLTPFTQYKLRLIANNVVGASQPSEPTKEFQTIQAPPSHPPKNVTVRA 1102

Query: 510  LEAIPLGSSAFYLKWVKPEQPN--GVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSA 567
            + A  L      ++W+  +Q    G   GY + Y+ V+       L +   I D T  S 
Sbjct: 1103 MSATEL-----RVRWIPLQQVEWYGNPRGYNVTYKEVRTN-----LSKSITIEDHTANSY 1152

Query: 568  KLAGLEPSTKYRIHLAGYTKAGDGAES-----KYLFYVPFKNPDNVEGRGSTPNNLVISW 622
             L  +E    Y I +  +   G    S     +    VP   P NVE   ++   +V+ W
Sbjct: 1153 VLENMEEFADYEIVMQAFNDVGSSTTSPKAVERTRESVPSLGPANVEANATSSTTIVVRW 1212

Query: 623  TAMPEIEHNAPHFKYRIFW 641
              +P    N     +++++
Sbjct: 1213 GDVPVEHQNGQIDGFKVYY 1231



 Score = 39.3 bits (90), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 20/206 (9%)

Query: 397  TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
            T+Q P   P     ++ + A +  V W P+      G+ RGY V   T K+   ++ + I
Sbjct: 1086 TIQAPPSHPPKNVTVRAMSATELRVRWIPLQQVEWYGNPRGYNV---TYKEVRTNLSKSI 1142

Query: 457  VNKGESTTTEVDKFVPASKNFARVL-AFNGAYNGPPSEIISFVTPEGVPGT-VQSLEAIP 514
              +  +  + V + +    ++  V+ AFN   +   S      T E VP     ++EA  
Sbjct: 1143 TIEDHTANSYVLENMEEFADYEIVMQAFNDVGSSTTSPKAVERTRESVPSLGPANVEANA 1202

Query: 515  LGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY----ISDPTTTSAK 568
              S+   ++W  V  E  NG + G+K+ Y +           R P+    I   TT +  
Sbjct: 1203 TSSTTIVVRWGDVPVEHQNGQIDGFKVYYGANS---------RSPFQYKNIPSNTTFTTT 1253

Query: 569  LAGLEPSTKYRIHLAGYTKAGDGAES 594
            L  L    +Y + +  YT+ GDGA S
Sbjct: 1254 LTELRKFVQYHVQVLAYTRLGDGALS 1279


>gi|397489669|ref|XP_003815845.1| PREDICTED: LOW QUALITY PROTEIN: contactin-3-like [Pan paniscus]
          Length = 1028

 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 167/625 (26%), Positives = 267/625 (42%), Gaps = 48/625 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P   S +I    +   L I + +  D GSY 
Sbjct: 239 AAKGSTVKLECFALGNPIPQINWRRSDGLPF--SSKIKLRKFSGVLEIPNFQQEDAGSYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    + +  A E+++ +EC+ASG P+P   W+ NG
Sbjct: 297 CIAENSRGKNVARG-RLTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYRWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +       R ++    +TI NL  +D+G + C A N  G VY    + V+A AP+ ++
Sbjct: 356 AALVL---EERTQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSK 412

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
            P  +      G  V L C+   +P+   +W      +    R ++L  G LKI +V  A
Sbjct: 413 NPMKKLVQVQVGSLVSLDCKPRASPRARSSWKKGDVSVQEHERISLLNDGGLKIANVTKA 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L + 
Sbjct: 473 DAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDII 532

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 533 FTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADL 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
            V+     P N  + ++ D   A +SW       +PV   S++       G++  T    
Sbjct: 593 IVRGSPGPPENVKVDEITDT-TAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT---- 647

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 648 ----TVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S      GS S   + W  V  E  NG   GY + ++ +    V   ++ +    D 
Sbjct: 702 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPL---GVTTWIQTVVTSPDT 758

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y + +  Y   G+G  S    +F     P   P  V     + + 
Sbjct: 759 PRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSE 818

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FW 641
           + +SW  +P    N     Y + +W
Sbjct: 819 IEVSWNTIPWKLSNGHLLGYEVRYW 843



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 157/618 (25%), Positives = 244/618 (39%), Gaps = 48/618 (7%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V  A+       ++           P   V+ PE + AA
Sbjct: 181 LYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 240

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P S      + +     + I N ++ D G+Y C
Sbjct: 241 KGSTVKLECFALGNPIPQINWRRSDGLPFSS---KIKLRKFSGVLEIPNFQQEDAGSYEC 297

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K+V    L +   P   +  KD       ++   CR  G PKP   W+ N
Sbjct: 298 IAENSRG---KNVARGRLTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYRWLKN 354

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
              L     T +E G L I++++  DSG + C A NK G    S  L  V      +  P
Sbjct: 355 GAALVLEERTQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNP 414

Query: 315 ED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
                +V+ G   +  C   + P  + S  W +G   +  +   R    ND  L +   +
Sbjct: 415 MKKLVQVQVGSLVSLDCKPRASPRARSS--WKKGD--VSVQEHERISLLNDGGLKIANVT 470

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQ 429
           + D+G YTC A+ +         L V  P     APSN   + V   +  ++        
Sbjct: 471 KADAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSN---MDVSVGESVILPCQVQHDP 527

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
            L   F  Y      +   +GS  E +   G S+   + + +    +   V       + 
Sbjct: 528 LLDIIFTWYFNGALADFKKDGSHFEKV--GGSSSGDLMIRNIQLKHSGKYVCMVQTGVDS 585

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
             S     V   G PG  ++++   +  +   L W + +  +  ++ Y I  Q+     V
Sbjct: 586 VSSAADLIV--RGSPGPPENVKVDEITDTTAQLSWKEGKDNHSPVISYSI--QARTPFSV 641

Query: 550 G-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPF 602
           G   +  +P + D  T +A +  L P  +Y   +    K G G  S      +    VP 
Sbjct: 642 GWQTVTTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
             P  V G G + + LVI+W  +PE   N   F Y + +R       W Q  V       
Sbjct: 702 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGV-TTWIQTVVTSPDTPR 760

Query: 663 LVLANQPT--FQPYEIKV 678
            V  N+    + PYE+KV
Sbjct: 761 YVFRNESIVPYSPYEVKV 778



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 166/727 (22%), Positives = 274/727 (37%), Gaps = 106/727 (14%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  +   +R    N   +L I ++  +D G + C   N  G   
Sbjct: 339  CRASGKPKPSYRWLKNGAALVLEERTQIEN--GALTISNLSVTDSGMFQCIAENKHGLVY 396

Query: 115  SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
            S S +L V+A AP F+  P  + +       V+ +CK    P     W      + +   
Sbjct: 397  S-SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSWKKGDVSVQEHER 455

Query: 172  NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
                  G   + I N+ K+D G Y C A N  G      ++ V+     IT AP +    
Sbjct: 456  ISLLNDG--GLKIANVTKADAGTYTCMAENQFGKANGTTHL-VVTEPTRITLAPSNMDVS 512

Query: 232  DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
             G++V+L C+V   P  ++   W  N             E  GG      +GDL I ++ 
Sbjct: 513  VGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGS----SSGDLMIRNIQ 568

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
               SG+Y C  +  + +   +  L V+                G     + + ++D + +
Sbjct: 569  LKHSGKYVCMVQTGVDSVSSAADLIVRG-------------SPGPPENVKVDEITDTTAQ 615

Query: 339  LSIVWLRG----SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD------ 388
            LS  W  G    S  I +  + R   S  +  TVT   E+  G+       EL+      
Sbjct: 616  LS--WKEGKDNHSPVISYSIQARTPFSVGWQ-TVTTVPEVIDGKTHTATVVELNPWVEYE 672

Query: 389  --------------FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
                           + ++   T +   E P +          + V++W+PV  +   G 
Sbjct: 673  FRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGE 732

Query: 435  -------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
                   FR   V TW +           V + ES        VP S    +V  +N   
Sbjct: 733  GFGYVVAFRPLGVTTWIQTVVTSPDTPRYVFRNES-------IVPYSPYEVKVGVYNNKG 785

Query: 488  NGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSV 544
             GP S + +  + E  P    S + A  L SS   + W  +  +  NG L+GY+++Y + 
Sbjct: 786  EGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNG 845

Query: 545  KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
             G +      ++        TSA+L GL+ +  Y   +  Y  AG G  S  +       
Sbjct: 846  GGKEESSSKMKVA----GNETSARLRGLKSNLAYYTAVRAYNSAGTGPFSATVNVTTKKT 901

Query: 601  -PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
             P + P NV    +T   ++++W  +  +E+ +    Y++F+R  +     N   VL+  
Sbjct: 902  PPSQPPGNVVWN-ATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQ----NNVQVLNTN 956

Query: 660  QS--ELVLANQPTFQPYEIKVVQTWTEKDGEGS----IRELIVNKGESTTTEVDKFVPAS 713
            ++  ELVL   P  + Y I+V  T    DG  S    I  +       +T+ +    P S
Sbjct: 957  KTSAELVL---PIKEDYIIEVKATTDGGDGTSSEQIRIPRITSMDARGSTSAISNVHPMS 1013

Query: 714  KNFARVL 720
                 VL
Sbjct: 1014 SYMPIVL 1020



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 147/373 (39%), Gaps = 26/373 (6%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFSDQGSY 102
           V   +KK+ L C   G P P   W  +G  I+ S +   + N G  ++I      D G+Y
Sbjct: 39  VGSEDKKITLNCEARGNPSPHYRWQLNGSDIDMSMEHRYKLNGGNLVVINPNRNWDTGTY 98

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKA---SGLPEPEIH 158
            C  +N +G   S    L       F T     ++  E + V   C     SG  E    
Sbjct: 99  QCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCXPPPHSG--ELSYA 156

Query: 159 WVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDVYVNV 214
           W+ N  P S    + RR V      + I  +  SD GNY C  T+ +    V       V
Sbjct: 157 WIFNEYP-SFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPLV 215

Query: 215 L-------AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
           L        + P+I  + P+      G TV L C   G P P++NW  +       +  +
Sbjct: 216 LRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKL 275

Query: 267 LE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
            + +G L+I +    D+G Y C A N  G     G LT     H     +D E+    S 
Sbjct: 276 RKFSGVLEIPNFQQEDAGSYECIAENSRGKNVARGRLTYYAKPHWVQLIKDVEIAVEDSL 335

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P  K S  WL+    +  E      Q  + +LT++  S  DSG + C A+ 
Sbjct: 336 YWECRASGKP--KPSYRWLKNGAALVLEER---TQIENGALTISNLSVTDSGMFQCIAEN 390

Query: 386 ELDFIEAQATLTV 398
           +   + + A L V
Sbjct: 391 KHGLVYSSAELKV 403



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 125/300 (41%), Gaps = 32/300 (10%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +E++ +T  C+A G P P   W  NG  I  +  +  +  G
Sbjct: 22  LLQGPVFIKEPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDIDMSMEHRYKLNG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N + I   R  DTG Y C ATNSLG +         A+        +   +V +G+ VV
Sbjct: 82  GNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        WI N+     E    R+   ETG L I+ V  +D G YTC 
Sbjct: 142 LLC----XPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCV 197

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
             + +  A+  GS   L ++    + +         PE      G +    C A+ +P  
Sbjct: 198 VTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +++  W R S+ + F S+ +  + +   L +    + D+G Y C A+       A+  LT
Sbjct: 258 QIN--WRR-SDGLPFSSKIKLRKFSGV-LEIPNFQQEDAGSYECIAENSRGKNVARGRLT 313


>gi|223462499|gb|AAI50609.1| Contactin 3 (plasmacytoma associated) [Homo sapiens]
          Length = 1028

 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 167/625 (26%), Positives = 268/625 (42%), Gaps = 48/625 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P   S +I    +   L I + +  D GSY 
Sbjct: 239 AAKGSTVKLECFALGNPIPQINWRRSDGLPF--SSKIKLRKFSGVLEIPNFQQEDAGSYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    + +  A E+++ +EC+ASG P+P   W+ NG
Sbjct: 297 CIAENSRGKNVARG-RLTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYRWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +       R ++    +TI NL  +D+G + C A N  G VY    + V+A AP+ ++
Sbjct: 356 AALVL---EERTQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSK 412

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
            P  +      G  V L C+   +P+   +W      +    R ++L  G LKI +V  A
Sbjct: 413 NPMKKLVQVQVGSLVSLDCKPRASPRALSSWKKGDVSVQEHERISLLNDGGLKIANVTKA 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L + 
Sbjct: 473 DAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDII 532

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 533 FTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADL 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
            V+     P N  + ++ D   A +SW       +PV   S++       G++  T    
Sbjct: 593 IVRGSPGPPENVKVDEITDT-TAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT---- 647

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 648 ----TVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S  +   GS S   + W  V  E  NG   GY + ++ +    V   ++ +    D 
Sbjct: 702 VPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPL---GVTTWIQTVVTSPDT 758

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y + +  Y   G+G  S    +F     P   P  V     + + 
Sbjct: 759 PRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSE 818

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FW 641
           + +SW  +P    N     Y + +W
Sbjct: 819 IEVSWNTIPWKLSNGHLLGYEVRYW 843



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 157/618 (25%), Positives = 243/618 (39%), Gaps = 48/618 (7%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V  A+       ++           P   V+ PE + AA
Sbjct: 181 LYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 240

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P S      + +     + I N ++ D G+Y C
Sbjct: 241 KGSTVKLECFALGNPIPQINWRRSDGLPFSS---KIKLRKFSGVLEIPNFQQEDAGSYEC 297

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K+V    L +   P   +  KD       ++   CR  G PKP   W+ N
Sbjct: 298 IAENSRG---KNVARGRLTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYRWLKN 354

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
              L     T +E G L I++++  DSG + C A NK G    S  L  V      +  P
Sbjct: 355 GAALVLEERTQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNP 414

Query: 315 ED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
                +V+ G   +  C   + P    S  W +G   +  +   R    ND  L +   +
Sbjct: 415 MKKLVQVQVGSLVSLDCKPRASPRALSS--WKKGD--VSVQEHERISLLNDGGLKIANVT 470

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQ 429
           + D+G YTC A+ +         L V  P     APSN   + V   +  ++        
Sbjct: 471 KADAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSN---MDVSVGESVILPCQVQHDP 527

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
            L   F  Y      +   +GS  E +   G S+   + + +    +   V       + 
Sbjct: 528 LLDIIFTWYFNGALADFKKDGSHFEKV--GGSSSGDLMIRNIQLKHSGKYVCMVQTGVDS 585

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
             S     V   G PG  ++++   +  +   L W + +  +  ++ Y I  Q+     V
Sbjct: 586 VSSAADLIV--RGSPGPPENVKVDEITDTTAQLSWKEGKDNHSPVISYSI--QARTPFSV 641

Query: 550 G-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPF 602
           G   +  +P + D  T +A +  L P  +Y   +    K G G  S      +    VP 
Sbjct: 642 GWQTVTTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
             P  V G G + + LVI+W  +PE   N   F Y + +R       W Q  V       
Sbjct: 702 VPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGV-TTWIQTVVTSPDTPR 760

Query: 663 LVLANQPT--FQPYEIKV 678
            V  N+    + PYE+KV
Sbjct: 761 YVFRNESIVPYSPYEVKV 778



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 166/727 (22%), Positives = 274/727 (37%), Gaps = 106/727 (14%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  +   +R    N   +L I ++  +D G + C   N  G   
Sbjct: 339  CRASGKPKPSYRWLKNGAALVLEERTQIEN--GALTISNLSVTDSGMFQCIAENKHGLVY 396

Query: 115  SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
            S S +L V+A AP F+  P  + +       V+ +CK    P     W      + +   
Sbjct: 397  S-SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRALSSWKKGDVSVQEHER 455

Query: 172  NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
                  G   + I N+ K+D G Y C A N  G      ++ V+     IT AP +    
Sbjct: 456  ISLLNDG--GLKIANVTKADAGTYTCMAENQFGKANGTTHL-VVTEPTRITLAPSNMDVS 512

Query: 232  DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
             G++V+L C+V   P  ++   W  N             E  GG      +GDL I ++ 
Sbjct: 513  VGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGS----SSGDLMIRNIQ 568

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
               SG+Y C  +  + +   +  L V+                G     + + ++D + +
Sbjct: 569  LKHSGKYVCMVQTGVDSVSSAADLIVRG-------------SPGPPENVKVDEITDTTAQ 615

Query: 339  LSIVWLRG----SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD------ 388
            LS  W  G    S  I +  + R   S  +  TVT   E+  G+       EL+      
Sbjct: 616  LS--WKEGKDNHSPVISYSIQARTPFSVGWQ-TVTTVPEVIDGKTHTATVVELNPWVEYE 672

Query: 389  --------------FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
                           + ++   T +   E P +          + V++W+PV  +   G 
Sbjct: 673  FRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGE 732

Query: 435  -------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
                   FR   V TW +           V + ES        VP S    +V  +N   
Sbjct: 733  GFGYVVAFRPLGVTTWIQTVVTSPDTPRYVFRNES-------IVPYSPYEVKVGVYNNKG 785

Query: 488  NGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSV 544
             GP S + +  + E  P    S + A  L SS   + W  +  +  NG L+GY+++Y + 
Sbjct: 786  EGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNG 845

Query: 545  KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
             G +      ++        TSA+L GL+ +  Y   +  Y  AG G  S  +       
Sbjct: 846  GGKEESSSKMKVA----GNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSATVNVTTKKT 901

Query: 601  -PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
             P + P NV    +T   ++++W  +  +E+ +    Y++F+R  +     N   VL+  
Sbjct: 902  PPSQPPGNVVWN-ATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQ----NNVQVLNTN 956

Query: 660  Q--SELVLANQPTFQPYEIKVVQTWTEKDGEGS----IRELIVNKGESTTTEVDKFVPAS 713
            +  +ELVL   P  + Y I+V  T    DG  S    I  +       +T+ +    P S
Sbjct: 957  KTSAELVL---PIKEDYIIEVKATTDGGDGTSSEQIRIPRITSMDARGSTSAISNVHPMS 1013

Query: 714  KNFARVL 720
                 VL
Sbjct: 1014 SYMPIVL 1020



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 147/374 (39%), Gaps = 28/374 (7%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFSDQGSY 102
           V   +KK+ L C   G P P   W  +G  I+ S +   + N G  ++I      D G+Y
Sbjct: 39  VGSEDKKITLHCEARGNPSPHYRWQLNGSDIDMSMEHRYKLNGGNLVVINPNRNWDTGTY 98

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEI 157
            C  +N +G   S    L       F T     ++  E + V   C   G P    E   
Sbjct: 99  QCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLC---GPPPHSGELSY 155

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDVYVN 213
            W+ N  P S    + RR V      + I  +  SD GNY C  T+ +    V       
Sbjct: 156 AWIFNEYP-SFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPL 214

Query: 214 VL-------AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           VL        + P+I  + P+      G TV L C   G P P++NW  +       +  
Sbjct: 215 VLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIK 274

Query: 266 ILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
           + + +G L+I +    D+G Y C A N  G     G LT     H     +D E+    S
Sbjct: 275 LRKFSGVLEIPNFQQEDAGSYECIAENSRGKNVARGRLTYYAKPHWVQLIKDVEIAVEDS 334

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             + C A   P  K S  WL+    +  E      Q  + +LT++  S  DSG + C A+
Sbjct: 335 LYWECRASGKP--KPSYRWLKNGAALVLEER---TQIENGALTISNLSVTDSGMFQCIAE 389

Query: 385 TELDFIEAQATLTV 398
            +   + + A L V
Sbjct: 390 NKHGLVYSSAELKV 403



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 125/300 (41%), Gaps = 32/300 (10%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +E++ +T  C+A G P P   W  NG  I  +  +  +  G
Sbjct: 22  LLQGPVFIKEPSNSIFPVGSEDKKITLHCEARGNPSPHYRWQLNGSDIDMSMEHRYKLNG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N + I   R  DTG Y C ATNSLG +         A+        +   +V +G+ VV
Sbjct: 82  GNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        WI N+     E    R+   ETG L I+ V  +D G YTC 
Sbjct: 142 LLC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCV 197

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
             + +  A+  GS   L ++    + +         PE      G +    C A+ +P  
Sbjct: 198 VTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +++  W R S+ + F S+ +  + +   L +    + D+G Y C A+       A+  LT
Sbjct: 258 QIN--WRR-SDGLPFSSKIKLRKFSGV-LEIPNFQQEDAGSYECIAENSRGKNVARGRLT 313


>gi|16758746|ref|NP_446331.1| contactin-4 precursor [Rattus norvegicus]
 gi|55976164|sp|Q62845.1|CNTN4_RAT RecName: Full=Contactin-4; AltName: Full=Brain-derived
           immunoglobulin superfamily protein 2; Short=BIG-2;
           Flags: Precursor
 gi|1016012|gb|AAC52262.1| neural cell adhesion protein BIG-2 precursor [Rattus norvegicus]
 gi|149036848|gb|EDL91466.1| contactin 4, isoform CRA_a [Rattus norvegicus]
          Length = 1026

 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 191/733 (26%), Positives = 300/733 (40%), Gaps = 112/733 (15%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+P  +W + DG PI    R  + +    L I + +  D GSY 
Sbjct: 237 AEKGSTVKLECFALGNPVPTILWRRADGKPIARKARRHKSS--GILEIPNFQQEDAGSYE 294

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    ++  A P +      I+ A EE+V +ECKA+G P+P   W+ NG
Sbjct: 295 CVAENSRGKNIAKG-QVTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNG 353

Query: 164 KPISQAPPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
            P+       R ++    G   ITI NL  SD G Y C A N  G +Y    ++V+A +P
Sbjct: 354 DPLLT-----RERIQIEQGTLNITIVNL--SDAGMYQCVAENKHGVIYASAELSVIAESP 406

Query: 220 EITEAPKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITD 276
           + +       T+   G  VV+ C+   +P+P   W   ++ L    R TI E G+L+I +
Sbjct: 407 DFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIIN 466

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
           V  +D+G YTC A N  GTA  +G++ VK+ T +   P   +V  G+S    C    D S
Sbjct: 467 VTKSDAGSYTCIATNHFGTASSTGNVVVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHS 526

Query: 337 LKLSIVWLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           L +   W      IDF+ +         Q +   L +       +G+Y C  QT +D + 
Sbjct: 527 LDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLS 586

Query: 392 AQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK- 446
           A A L V+ P   P   T+ ++ D   A +SW P     SP ++      Y +Q  T   
Sbjct: 587 AAADLIVRGPPGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFS 639

Query: 447 ---DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EI 494
                  ++ EL+   G++ T  V    P  +   R +A N    G PS         E 
Sbjct: 640 VGWQAVSTVPELV--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEA 697

Query: 495 ISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPL 552
           +  VTP  V G   S        S   + W  V  E  NG   GY + ++       G +
Sbjct: 698 LPEVTPANVSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFR-----PHGKM 745

Query: 553 LERLPYI--SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNP 605
           +  L  +  +D +    +   + P + + + +  +   G+G  S   L Y     P K P
Sbjct: 746 IWMLTVLASADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTLVYSAEEEPTKPP 805

Query: 606 DNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVL 665
            ++  R  +  ++ + W A P                                     + 
Sbjct: 806 ASIFARSLSATDIEVFW-ASP-------------------------------------IG 827

Query: 666 ANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 725
            N+   Q YE+K    W   D E + R+ I   G  T+T++      +     V A+N A
Sbjct: 828 KNRGRIQGYEVKY---WRHDDKEENARK-IRTVGNQTSTKITNLKGNALYHLSVKAYNSA 883

Query: 726 YNGPPSEIISFVT 738
             GP S  ++  T
Sbjct: 884 GTGPSSAAVNVTT 896



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 175/687 (25%), Positives = 260/687 (37%), Gaps = 103/687 (14%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE +D G+YTC V+N V   +       ++           P   V+ PE + A
Sbjct: 178 NLYIAKVEKADVGNYTCVVTNTVTSHQVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPA 237

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
            +  TV  EC A G P P I W   +GKPI++     RR      + I N ++ D G+Y 
Sbjct: 238 EKGSTVKLECFALGNPVPTILWRRADGKPIAR---KARRHKSSGILEIPNFQQEDAGSYE 294

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       V   A  P   +   D +    ++V   C+  G PKP   W+ N 
Sbjct: 295 CVAENSRGKNIAKGQVTFYAQ-PNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNG 353

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
             L       +E G L IT V  +D+G Y C A NK G    S  L+V     I + P+ 
Sbjct: 354 DPLLTRERIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIYASAELSV-----IAESPDF 408

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  +    W +G E I  E+E R   S D +L +
Sbjct: 409 SRTLLKRVTLVKVGGEVVIECKPKASP--RPVYTWRKGRE-ILRENE-RITISEDGNLRI 464

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
              ++ D+G YTC A        +   + V+ P +     + + V   +  V+       
Sbjct: 465 INVTKSDAGSYTCIATNHFGTASSTGNVVVKDPTKVMVPPSSMDVTVGESIVLPCQVTHD 524

Query: 429 QSLRGHFRGYKVQTWT--------EKD--------GEGSIRELIVNKGE---------ST 463
            SL   F      TWT        +KD        G+ S  +L++   +           
Sbjct: 525 HSLDIVF------TWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMV 578

Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYL 522
            T VDK   A+    R         GPP    +    E    T Q S    P   S   +
Sbjct: 579 QTSVDKLSAAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITM 629

Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
             ++   P      + + +Q+V           +P + D  T +A + GL P  +Y    
Sbjct: 630 YVIQARTP------FSVGWQAVS---------TVPELVDGKTFTATVVGLNPWVEYEFRT 674

Query: 583 AGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
                 G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F 
Sbjct: 675 VAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFG 734

Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL 694
           Y + +R H     W    +     S  V  N+    F P+E+KV     + +G  S   L
Sbjct: 735 YVVAFRPHGK-MIWMLTVLASADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTL 793

Query: 695 IVNKGESTTTEVDKFVPASKNFARVLA 721
           + +  E  T       P +  FAR L+
Sbjct: 794 VYSAEEEPTK------PPASIFARSLS 814



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 142/369 (38%), Gaps = 30/369 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  ++            SL+I +  +  D G+Y C  +
Sbjct: 44  KKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDSGTYQCIAT 103

Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVHN 162
           N  G   S    L       F T     ++    + +   C   G P    E    W+ N
Sbjct: 104 NSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLC---GPPPHSGELSYAWIFN 160

Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN- 213
             P  Q   + RR V      + I  + K+D GNY C  TN+      LG     +  N 
Sbjct: 161 EHPSYQ---DNRRFVSQETGNLYIAKVEKADVGNYTCVVTNTVTSHQVLGPPTPLILRND 217

Query: 214 --VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILET 269
             +  + P+I  + P+      G TV L C   G P P + W   + K +         +
Sbjct: 218 GVMGEYEPKIEVQFPETVPAEKGSTVKLECFALGNPVPTILWRRADGKPIARKARRHKSS 277

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I +    D+G Y C A N  G     G +T     +      D  V   +S  + C
Sbjct: 278 GILEIPNFQQEDAGSYECVAENSRGKNIAKGQVTFYAQPNWVQIINDIHVAMEESVFWEC 337

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   P  K +  WL+  +P+        +Q    +L +T  +  D+G Y C A+ +   
Sbjct: 338 KANGRP--KPTYRWLKNGDPLLTRER---IQIEQGTLNITIVNLSDAGMYQCVAENKHGV 392

Query: 390 IEAQATLTV 398
           I A A L+V
Sbjct: 393 IYASAELSV 401



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 115/290 (39%), Gaps = 34/290 (11%)

Query: 119 DLSVLAAPYFTVEPEFIN---AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D   L  P F  EP  +     +EE+ V   C+  G P+P I W  NG  +     + R 
Sbjct: 19  DDYTLHGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGM-DFRY 77

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-G 233
            V    + I N  K+ D+G Y C ATNS G +         A+        +   +V  G
Sbjct: 78  SVVEGSLLINNPNKTQDSGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRG 137

Query: 234 KTVVLTCRVFGAPKPEVN-----WIHNQKE--LTGGRYTILETGDLKITDVAFADSGEYT 286
           + +VL C     P P        WI N+        R+   ETG+L I  V  AD G YT
Sbjct: 138 QGMVLLC----GPPPHSGELSYAWIFNEHPSYQDNRRFVSQETGNLYIAKVEKADVGNYT 193

Query: 287 CFARNKLGTAQ-----------GSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           C   N + + Q             G +   E       PE    E G +    C A+ +P
Sbjct: 194 CVVTNTVTSHQVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGSTVKLECFALGNP 253

Query: 336 SLKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
               +I+W R   +PI  ++  R  +S+   L +    + D+G Y C A+
Sbjct: 254 V--PTILWRRADGKPIARKA--RRHKSSGI-LEIPNFQQEDAGSYECVAE 298



 Score = 41.6 bits (96), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 21/192 (10%)

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            RG  +GY+V+ W   D E + R+ I   G  T+T++      +     V A+N A  GP 
Sbjct: 830  RGRIQGYEVKYWRHDDKEENARK-IRTVGNQTSTKITNLKGNALYHLSVKAYNSAGTGPS 888

Query: 492  SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
            S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 889  SAAVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNR 944

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
             +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P  + 
Sbjct: 945  QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIPKISN 994

Query: 606  DNVEGRGSTPNN 617
                G G++ +N
Sbjct: 995  SYARGSGASTSN 1006


>gi|307191583|gb|EFN75081.1| Neuroglian [Harpegnathos saltator]
          Length = 142

 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 83/142 (58%), Positives = 102/142 (71%)

Query: 452 IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLE 511
           +RE+ +  G  T  EV KF+P SKNF R+LA+NG YNGP SE+++F TPEGVPGTV SLE
Sbjct: 1   MREIDIRGGNKTHAEVSKFIPYSKNFVRILAYNGRYNGPASELLTFDTPEGVPGTVLSLE 60

Query: 512 AIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAG 571
           A P+GSSA +L W +P +PNGVL GY+I YQ V GTK+  LLER P I+D    +AKLA 
Sbjct: 61  AFPMGSSALFLVWSRPAEPNGVLTGYRIYYQVVNGTKLETLLERKPQITDSDAINAKLAA 120

Query: 572 LEPSTKYRIHLAGYTKAGDGAE 593
           L P TKYR+H+   TK G G E
Sbjct: 121 LAPDTKYRVHIRATTKMGQGNE 142



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/51 (56%), Positives = 38/51 (74%)

Query: 691 IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
           +RE+ +  G  T  EV KF+P SKNF R+LA+NG YNGP SE+++F TPEG
Sbjct: 1   MREIDIRGGNKTHAEVSKFIPYSKNFVRILAYNGRYNGPASELLTFDTPEG 51


>gi|347964229|ref|XP_311185.5| AGAP000659-PA [Anopheles gambiae str. PEST]
 gi|333467433|gb|EAA06917.5| AGAP000659-PA [Anopheles gambiae str. PEST]
          Length = 2177

 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 185/651 (28%), Positives = 268/651 (41%), Gaps = 92/651 (14%)

Query: 49  KKVELFCIFGGTPLPQ--TIWSKDGVPI-NPSDRISQGN-YGKSLIIKHVEFSDQGSYTC 104
           + VEL CI    PL +  TIW KDG+PI N     +Q + + +++ + HV  +  G YTC
Sbjct: 211 QTVELECIANARPLHELETIWLKDGIPIENTGIHYTQTDPWNRTVTLLHVNLTHTGEYTC 270

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVE--PEFINAAEEETV-------TFECKASGLPEP 155
           +V    G    + I   V +    TV+  P F+     ET+          C   G P P
Sbjct: 271 QVQMRTG---GHPI---VFSMAQVTVQEPPTFVTPLRTETLGEYGSRTVLACDVIGEPLP 324

Query: 156 EIHWVHNGKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
           +I W  N  PI Q     R  V   N + I  L   DT  + C ATN  G      ++ V
Sbjct: 325 KITWFKNAWPIEQVAG--RYTVQDDNSLEIYKLGMDDTAMFQCLATNEAGEKSAYTWLKV 382

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDL 272
               P +   P ++  +DGK   + CR   AP P + WI N      T  R  IL++GDL
Sbjct: 383 KTSIPFMEIPPVNQTILDGKDATMNCRAIAAPTPSIQWIFNDTYPIETSSRMQILDSGDL 442

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV 332
            I++V   D G YTC   N+ G   GSG LTV   T I   P D  V  G SA   C   
Sbjct: 443 LISNVRETDGGLYTCIRENEAGRVIGSGYLTVLVRTQINRPPADTTVLLGHSAALECGVS 502

Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
           SDP++  +I W R    +  ++  R     D +L +T+    D GQY+C   +       
Sbjct: 503 SDPTVPYNIDWYREPNRLPIKNSQRIGVKKDGTLEITEVRPSDVGQYSCIVTSPGGNETR 562

Query: 393 QATLTV-QVPLEAPSNFTLIQVIDAK-KAV-VSWNPVSPQSLRGHFRGYKVQTWTEKDGE 449
            A L+V ++P  APSN   +++   + +A+ VSW P           G+        DG 
Sbjct: 563 SARLSVIELPF-APSNVQAVRLTTPQNRAINVSWTP-----------GF--------DGN 602

Query: 450 GSIRELIVNKGE------------STTTEVDKFVPASKNFA------------RVLAFNG 485
             I + I+ + E            +  TEV      +K               R+ + N 
Sbjct: 603 SKIIKFIIQRREVPELGPLPDPLLNWVTEVANVSAQAKWMLLTNLKAATAYQFRISSVNR 662

Query: 486 AYNGPPSEIISFV-----TPEGVP-GTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGY 537
              G PS+  + V      P G P G V S  +    S+   ++W  P  E  NG + GY
Sbjct: 663 VGEGSPSDPSNVVKLPQEAPSGPPVGFVGSARS----STEIIIQWQPPLEEHRNGQIHGY 718

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG-----DGA 592
            I+Y+ + G    P   R   I++    +  +  L     Y I +A Y   G     DGA
Sbjct: 719 IIRYR-LFGYNESPWNYR--NITNEAQRNYLIQELITWKDYVIEIAAYNNMGVGVYTDGA 775

Query: 593 ESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI-FWR 642
           + K    VP   P  V  +      + I WT     + N  +  Y++  WR
Sbjct: 776 KIKTKEGVPEAPPTGVRVQAINSTAIRIWWTPPNPQQINGINQGYKLQAWR 826



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 152/654 (23%), Positives = 261/654 (39%), Gaps = 52/654 (7%)

Query: 61  PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG-VGEAKSYS-I 118
           P P   W  D  P+  + + +Q +    LII   +  D  +Y     N  +G  +S   +
Sbjct: 123 PSPSVTWQTDEGPLEYNIKYAQTS-SNQLIILSADEGDIRAYRARAFNTQIGREESTGFV 181

Query: 119 DLSVLAAPYFTVEPEFINAAEE-------ETVTFECKASGLP--EPEIHWVHNGKPISQA 169
            L+V   PY  + PE I   +        +TV  EC A+  P  E E  W+ +G PI   
Sbjct: 182 RLNVTGNPYTEIAPEIIVHPQNTKVVRGAQTVELECIANARPLHELETIWLKDGIPIENT 241

Query: 170 PPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLG---YVYKDVYVNVLAHAPEITEAP 225
             +  +    NR +T+ ++  + TG Y C      G    V+    V V      +T   
Sbjct: 242 GIHYTQTDPWNRTVTLLHVNLTHTGEYTCQVQMRTGGHPIVFSMAQVTVQEPPTFVTPLR 301

Query: 226 KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ--KELTGGRYTILETGDLKITDVAFADSG 283
            +     G   VL C V G P P++ W  N    E   GRYT+ +   L+I  +   D+ 
Sbjct: 302 TETLGEYGSRTVLACDVIGEPLPKITWFKNAWPIEQVAGRYTVQDDNSLEIYKLGMDDTA 361

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTHITDQPE-DYEVEAGQSATFRCNAVSDPSLKLSIV 342
            + C A N+ G       L VK      + P  +  +  G+ AT  C A++ P+   SI 
Sbjct: 362 MFQCLATNEAGEKSAYTWLKVKTSIPFMEIPPVNQTILDGKDATMNCRAIAAPTP--SIQ 419

Query: 343 WL-RGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           W+   + PI+  S  + + S D  L ++   E D G YTC  + E   +     LTV V 
Sbjct: 420 WIFNDTYPIETSSRMQILDSGD--LLISNVRETDGGLYTCIRENEAGRVIGSGYLTVLVR 477

Query: 402 LEA---PSNFT-LIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIV 457
            +    P++ T L+    A +  VS +P  P         Y +  + E +         +
Sbjct: 478 TQINRPPADTTVLLGHSAALECGVSSDPTVP---------YNIDWYREPNRLPIKNSQRI 528

Query: 458 NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS 517
              +  T E+ +  P+       +  +   N   S  +S +     P  VQ++      +
Sbjct: 529 GVKKDGTLEITEVRPSDVGQYSCIVTSPGGNETRSARLSVIELPFAPSNVQAVRLTTPQN 588

Query: 518 SAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLE-RLPYISDPTTTSAK-----LAG 571
            A  + W      N  ++ + I+ + V   ++GPL +  L ++++    SA+     L  
Sbjct: 589 RAINVSWTPGFDGNSKIIKFIIQRREVP--ELGPLPDPLLNWVTEVANVSAQAKWMLLTN 646

Query: 572 LEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAM 625
           L+ +T Y+  ++   + G+G+ S      K     P   P    G   +   ++I W   
Sbjct: 647 LKAATAYQFRISSVNRVGEGSPSDPSNVVKLPQEAPSGPPVGFVGSARSSTEIIIQWQPP 706

Query: 626 PEIEHNAPHFKYRIFWRRHNTGEA-WNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            E   N     Y I +R     E+ WN  ++ +  Q   ++    T++ Y I++
Sbjct: 707 LEEHRNGQIHGYIIRYRLFGYNESPWNYRNITNEAQRNYLIQELITWKDYVIEI 760



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 158/392 (40%), Gaps = 42/392 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKS--LIIKHVEFSDQGSYTCEVSNGV 110
           L C   G P P   W K+GVP+        GN+  S  L I ++   D GSY CE SN  
Sbjct: 27  LQCHALGFPQPTYRWLKNGVPV--------GNFSSSQYLKILNITRDDAGSYQCEASNKA 78

Query: 111 GEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKPISQ 168
           G   S  ID+ V     F  + E  I+ A              +P P + W  +  P+  
Sbjct: 79  GTIFSEKIDVVVAYMGVFVDQSESIISVASGYPAILNLSFIESVPSPSVTWQTDEGPLEY 138

Query: 169 APPNPR-RKVGPNRITIENLRKSDTGNYGCNATN-------SLGYVYKDVYVNVLAH-AP 219
              N +  +   N++ I +  + D   Y   A N       S G+V  +V  N     AP
Sbjct: 139 ---NIKYAQTSSNQLIILSADEGDIRAYRARAFNTQIGREESTGFVRLNVTGNPYTEIAP 195

Query: 220 EITEAPKDEYTVDG-KTVVLTCRVFGAPKPEVN--WIHN--QKELTGGRYTILETGDLKI 274
           EI   P++   V G +TV L C     P  E+   W+ +    E TG  YT  +  +  +
Sbjct: 196 EIIVHPQNTKVVRGAQTVELECIANARPLHELETIWLKDGIPIENTGIHYTQTDPWNRTV 255

Query: 275 T--DVAFADSGEYTCFARNKLG---TAQGSGSLTVKE-HTHITDQPEDYEVEAGQSATFR 328
           T   V    +GEYTC  + + G          +TV+E  T +T    +   E G      
Sbjct: 256 TLLHVNLTHTGEYTCQVQMRTGGHPIVFSMAQVTVQEPPTFVTPLRTETLGEYGSRTVLA 315

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C+ + +P  K  I W + + PI+ +   R+   +D SL + K    D+  + C A  E  
Sbjct: 316 CDVIGEPLPK--ITWFKNAWPIE-QVAGRYTVQDDNSLEIYKLGMDDTAMFQCLATNEAG 372

Query: 389 FIEAQATLTVQVPLE----APSNFTLIQVIDA 416
              A   L V+  +      P N T++   DA
Sbjct: 373 EKSAYTWLKVKTSIPFMEIPPVNQTILDGKDA 404



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 75/299 (25%), Positives = 129/299 (43%), Gaps = 28/299 (9%)

Query: 123 LAAPYFTVEPEFINAA--EEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN 180
           L AP FT +P    +   E  T   +C A G P+P   W+ NG P+     +   K    
Sbjct: 3   LQAPRFTTQPSSSGSIVNEGRTKILQCHALGFPQPTYRWLKNGVPVGNFSSSQYLK---- 58

Query: 181 RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLT 239
              I N+ + D G+Y C A+N  G ++ +    V+A+     +  +   +V  G   +L 
Sbjct: 59  ---ILNITRDDAGSYQCEASNKAGTIFSEKIDVVVAYMGVFVDQSESIISVASGYPAILN 115

Query: 240 CRVF-GAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADSGEYTCFARN-KLGTA 296
                  P P V W  ++  L    +Y    +  L I      D   Y   A N ++G  
Sbjct: 116 LSFIESVPSPSVTWQTDEGPLEYNIKYAQTSSNQLIILSADEGDIRAYRARAFNTQIGRE 175

Query: 297 QGSG----SLTVKEHTHITDQ----PEDYEVEAG-QSATFRCNAVSDPSLKLSIVWLRGS 347
           + +G    ++T   +T I  +    P++ +V  G Q+    C A + P  +L  +WL+  
Sbjct: 176 ESTGFVRLNVTGNPYTEIAPEIIVHPQNTKVVRGAQTVELECIANARPLHELETIWLKDG 235

Query: 348 EPIDFESEPRFVQSNDYSLTVT--KSSELDSGQYTCRAQTELD---FIEAQATLTVQVP 401
            PI+  +   + Q++ ++ TVT    +   +G+YTC+ Q        + + A +TVQ P
Sbjct: 236 IPIE-NTGIHYTQTDPWNRTVTLLHVNLTHTGEYTCQVQMRTGGHPIVFSMAQVTVQEP 293



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 148/642 (23%), Positives = 237/642 (36%), Gaps = 134/642 (20%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWS-KDGVPINPSDRISQGNYGKSLIIKHVEFSDQGS 101
           +  L  K   + C     P P   W   D  PI  S R+   + G  L+I +V  +D G 
Sbjct: 396 QTILDGKDATMNCRAIAAPTPSIQWIFNDTYPIETSSRMQILDSGD-LLISNVRETDGGL 454

Query: 102 YTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEP--EIHW 159
           YTC   N  G     S  L+VL        P         +   EC  S  P     I W
Sbjct: 455 YTCIRENEAGRVIG-SGYLTVLVRTQINRPPADTTVLLGHSAALECGVSSDPTVPYNIDW 513

Query: 160 VH--NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--L 215
               N  PI  +     +K G   IT   +R SD G Y C  T+  G   +   ++V  L
Sbjct: 514 YREPNRLPIKNSQRIGVKKDGTLEIT--EVRPSDVGQYSCIVTSPGGNETRSARLSVIEL 571

Query: 216 AHAPEITEA-----PKDEYT-------VDGKTVVLTCRV-------FG-APKPEVNWIHN 255
             AP   +A     P++           DG + ++   +        G  P P +NW+  
Sbjct: 572 PFAPSNVQAVRLTTPQNRAINVSWTPGFDGNSKIIKFIIQRREVPELGPLPDPLLNWVTE 631

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE 315
              ++     +L      +T++  A + ++   + N++G  +GS S    + +++   P+
Sbjct: 632 VANVSAQAKWML------LTNLKAATAYQFRISSVNRVG--EGSPS----DPSNVVKLPQ 679

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVW--------------------LRG--SEPIDFE 353
             E  +G    F  +A S  S ++ I W                    L G    P ++ 
Sbjct: 680 --EAPSGPPVGFVGSARS--STEIIIQWQPPLEEHRNGQIHGYIIRYRLFGYNESPWNYR 735

Query: 354 SEPRFVQSN----------DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE 403
           +     Q N          DY + +   + +  G YT  A+ +          T +   E
Sbjct: 736 NITNEAQRNYLIQELITWKDYVIEIAAYNNMGVGVYTDGAKIK----------TKEGVPE 785

Query: 404 APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW-------------------T 444
           AP     +Q I++    + W P +PQ + G  +GYK+Q W                    
Sbjct: 786 APPTGVRVQAINSTAIRIWWTPPNPQQINGINQGYKLQAWRYEKPPTLGAGGGGAIASGA 845

Query: 445 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP---- 500
             DG     ELI  + +  T   +   P ++  + VL+    Y      ++ F  P    
Sbjct: 846 GDDGN----ELIETEMKVLTVPPNLLDPLAEQ-SEVLSGLEKYTAYNITVLCFTDPGDGE 900

Query: 501 EGVPGTVQSLEAIPLGSSAFYLK----------WVKPEQPNGVLMGYKIKYQSVKGTKVG 550
             VP  VQ+LE +P   S+              W  P + NGVL+GY+I+Y       V 
Sbjct: 901 RSVPVPVQTLEDVPDEVSSLQFSGVSDREVTVTWDPPRRTNGVLLGYQIRY------YVK 954

Query: 551 PLLERLPYISDPTTTSA-KLAGLEPSTKYRIHLAGYTKAGDG 591
            L E   +++   T S  K+  L  +T Y   ++G+T  G G
Sbjct: 955 DLPETARFVNLTATQSRFKVTHLTATTHYTFEVSGWTVVGAG 996



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 15/161 (9%)

Query: 475  KNFARVLA-FNGAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWVKPEQ--P 530
            +N+  +L  FN   +GPPS  ++    E VP G    +E   + S+   L+W  P+Q   
Sbjct: 1610 RNYEIILQPFNSQGSGPPSSPVAVYVGEAVPIGEPLDIEGKAISSTEVSLRWNPPQQNTQ 1669

Query: 531  NGVLMGYKIKY----QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYT 586
            NG L+GYKI Y     S +     P  E +  +     T   L  L+  T+YRI +  + 
Sbjct: 1670 NGELLGYKIFYLVTDSSTQDLDPVPAAEEIEVVPASYNTH-NLVFLDKYTEYRIQILAFN 1728

Query: 587  KAGDGAES-----KYLFYVPFKNPDNVEGRGSTPNNLVISW 622
             AGDG  S     K +  +P   P  +     T N+L +SW
Sbjct: 1729 PAGDGPRSAPITVKTMAGLP-GPPTQLHFSDITMNSLTVSW 1768



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 36/212 (16%)

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPG------TVQSLEAI 513
            +++T  V    P +    R++A N      PSE    F T +  P       TV+++ A 
Sbjct: 1067 DASTVTVLGLTPFTTYRLRIIACNVVGRSEPSEATKDFQTIQARPKHPPFNVTVRAMSAT 1126

Query: 514  PLGSSAFYLKWVKPEQPN--GVLMGYKIKYQSVKGTK-------VGPLLE---------- 554
             L      ++W+  +Q    G   GY I Y+++  ++       +   LE          
Sbjct: 1127 EL-----RVRWIPLQQTEWYGNPRGYNITYRNIHESETFGSAESIATSLEDSEKSIWSSG 1181

Query: 555  RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF-----YVPFKNPDNVE 609
            R   I DPT  S  L GLE  + Y I +    + G+  +S + F      VP   P  VE
Sbjct: 1182 RSVMIEDPTANSHVLDGLEEWSVYEIAMTAVNEVGESIDSPHAFERTREAVPSMGPAGVE 1241

Query: 610  GRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
               ++   +V+ WT +P++  N     YR+++
Sbjct: 1242 ANATSSTTIVVRWTEVPKVHRNGQIEGYRVYY 1273



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 6/140 (4%)

Query: 412  QVIDAKKAVVSWNPVSPQSLRGHFRGYKV------QTWTEKDGEGSIRELIVNKGESTTT 465
            + I + +  + WNP    +  G   GYK+       +  + D   +  E+ V      T 
Sbjct: 1650 KAISSTEVSLRWNPPQQNTQNGELLGYKIFYLVTDSSTQDLDPVPAAEEIEVVPASYNTH 1709

Query: 466  EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWV 525
             +      ++   ++LAFN A +GP S  I+  T  G+PG    L    +  ++  + W 
Sbjct: 1710 NLVFLDKYTEYRIQILAFNPAGDGPRSAPITVKTMAGLPGPPTQLHFSDITMNSLTVSWD 1769

Query: 526  KPEQPNGVLMGYKIKYQSVK 545
             P + NG+++GY + Y++ +
Sbjct: 1770 LPRKRNGLIVGYIVAYETTE 1789



 Score = 46.2 bits (108), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 17/186 (9%)

Query: 420  VVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTT--EVDKFVPASKNF 477
            VV W  V      G   GY+V   +       + + I N    TTT  E+ KF   ++  
Sbjct: 1251 VVRWTEVPKVHRNGQIEGYRVYYGSVAGRTPVLHKTIANNYTFTTTLTELKKF---TQYD 1307

Query: 478  ARVLAF----NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV 533
             +VLA+    +GA + PP  I +F   E  PG   ++    +  S   + W  PE+PNG 
Sbjct: 1308 IQVLAYTRLGDGALSTPPVRIQTF---EDSPGAPSNVSFPDVSFSMARIIWDVPEEPNGE 1364

Query: 534  LMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
            ++ Y++ Y  + G++     +  P    P+  + +   L     Y   +   T+ G G  
Sbjct: 1365 ILAYRVTYL-LNGSQNLNFTQEFP----PSDRTFRATQLLAERYYLFSVTAQTRLGWGKT 1419

Query: 594  SKYLFY 599
            +  L Y
Sbjct: 1420 AAALVY 1425


>gi|348510473|ref|XP_003442770.1| PREDICTED: contactin-3-like [Oreochromis niloticus]
          Length = 1076

 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 169/625 (27%), Positives = 272/625 (43%), Gaps = 51/625 (8%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+P+  W +  GVP  PS ++   N    L I + +  D G+Y 
Sbjct: 243 AAKESAVKLECFALGNPVPEISWRRTSGVPF-PS-KVKMKNSNAVLEIPNFQQEDAGTYE 300

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    +S  A P++         + E  + +ECKA+G P+P   W+ NG
Sbjct: 301 CMAENRRGKNAARG-RISFHAKPHWLQTMADTALSIEGNLFWECKANGKPKPSYSWLKNG 359

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           +   Q   + R ++    ++I +L +SD+G Y C A N  G +Y    + VLA  P  ++
Sbjct: 360 E---QVMADGRVQIENGALSISSLNRSDSGMYQCVAENKHGIIYSSAQLMVLASPPTFSK 416

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
           +P         G  V L C+   +P     W    + L    R  +L  G LKI +V   
Sbjct: 417 SPLRALLKARSGSEVTLECKPQASPPAISLWKKGNEILQRTERIALLPDGTLKIANVTKR 476

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+  YTC A+N+ GTA  +G L V E T IT +P + E+  G+S    C   SDP+L +S
Sbjct: 477 DAASYTCIAKNQFGTASTTGRLIVTEPTRITMRPTNMEIIVGESIVLPCQIASDPALDVS 536

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLT---VTKSSELD-SGQYTCRAQTELDFIEAQATL 396
             W    + IDF+ +    +    S++   + ++ +L+  G+Y C   T+++ +   A L
Sbjct: 537 FSWAFNGQLIDFQRDSDHFERVGGSISGDLMIRNIQLNHGGKYVCVIDTDVESLSTSAIL 596

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKDGE 449
            V+ P   P   ++ ++ D+  A +SW P           GY VQ        W   D  
Sbjct: 597 VVKGPPGPPDKVSVEEITDS-TAQLSWTPGRDNG--SPITGYIVQARTPFTVGWQAVD-- 651

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQ 508
            ++ E +VN    T T V         F RV+A N    G PS   +   T + +P T  
Sbjct: 652 -TVPE-VVNGNMLTATVVGLNAWVEYEF-RVVARNAVGLGEPSPASAKTRTEDAIPDTAP 708

Query: 509 SLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565
           +      G+ S   + W  V  E  NG   GY I ++      VG +      IS   T+
Sbjct: 709 TDVGGGGGTKSELVITWEPVPEELQNGEGFGYIIAFR-----PVGTVTWTRAVIS---TS 760

Query: 566 SAKLA----GLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEGRGSTPN 616
           +A+       + P + + + +  Y   G+G  S          VP   P  V  R  +  
Sbjct: 761 AARYVFRNDTIPPFSPFDVKVGAYNNRGEGPFSSIAVVYSAEEVPSVAPKRVRARSVSAA 820

Query: 617 NLVISWTAMPEIEHNAPHFKYRIFW 641
            + +SW A+P I      ++  ++W
Sbjct: 821 QIEVSWEALPTIPERVLGYEV-MYW 844



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 162/630 (25%), Positives = 254/630 (40%), Gaps = 71/630 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           SL I  VE SD G+YTC V+N V   K  S    ++           P   V  P+ + A
Sbjct: 184 SLYIAKVERSDVGNYTCVVNNTVTREKILSSPTPLVLRSDGVMGEYEPKIEVHFPDSVPA 243

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+E  V  EC A G P PEI W   +G P    P   + K     + I N ++ D G Y 
Sbjct: 244 AKESAVKLECFALGNPVPEISWRRTSGVPF---PSKVKMKNSNAVLEIPNFQQEDAGTYE 300

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A N  G       ++  A    +        +++G  +   C+  G PKP  +W+ N 
Sbjct: 301 CMAENRRGKNAARGRISFHAKPHWLQTMADTALSIEGN-LFWECKANGKPKPSYSWLKNG 359

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTV-KEHTHITDQPE 315
           +++       +E G L I+ +  +DSG Y C A NK G    S  L V       +  P 
Sbjct: 360 EQVMADGRVQIENGALSISSLNRSDSGMYQCVAENKHGIIYSSAQLMVLASPPTFSKSPL 419

Query: 316 DYEVEA--GQSATFRCN-AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
              ++A  G   T  C    S P++ L   W +G+E +  +   R     D +L +   +
Sbjct: 420 RALLKARSGSEVTLECKPQASPPAISL---WKKGNEIL--QRTERIALLPDGTLKIANVT 474

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV----VSWNPVSP 428
           + D+  YTC A+ +         L V  P       T +++I  +  V    ++ +P   
Sbjct: 475 KRDAASYTCIAKNQFGTASTTGRLIVTEPTRITMRPTNMEIIVGESIVLPCQIASDPALD 534

Query: 429 QSLRGHFRGYKVQTWTEKD----------GEGSIRELIVNKGESTTTEVDKFVPASKNFA 478
            S    F G  +    + D          G+  IR + +N G      +D  V  S + +
Sbjct: 535 VSFSWAFNGQLIDFQRDSDHFERVGGSISGDLMIRNIQLNHGGKYVCVIDTDV-ESLSTS 593

Query: 479 RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV-LMGY 537
            +L   G   GPP ++              S+E I    S   L W  P + NG  + GY
Sbjct: 594 AILVVKGP-PGPPDKV--------------SVEEI--TDSTAQLSWT-PGRDNGSPITGY 635

Query: 538 KIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----- 591
            +  Q+     VG   ++ +P + +    +A + GL    +Y   +      G G     
Sbjct: 636 IV--QARTPFTVGWQAVDTVPEVVNGNMLTATVVGLNAWVEYEFRVVARNAVGLGEPSPA 693

Query: 592 -AESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
            A+++    +P   P +V G G T + LVI+W  +PE   N   F Y I +R   T   W
Sbjct: 694 SAKTRTEDAIPDTAPTDVGGGGGTKSELVITWEPVPEELQNGEGFGYIIAFRPVGT-VTW 752

Query: 651 NQDDVLDWRQSELVLANQ--PTFQPYEIKV 678
            +  V+    +  V  N   P F P+++KV
Sbjct: 753 TR-AVISTSAARYVFRNDTIPPFSPFDVKV 781



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 150/635 (23%), Positives = 238/635 (37%), Gaps = 76/635 (11%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +    R+   N   +L I  +  SD G Y C   N  G   
Sbjct: 343 CKANGKPKPSYSWLKNGEQVMADGRVQIEN--GALSISSLNRSDSGMYQCVAENKHGIIY 400

Query: 115 SYSIDLSVLAAP-YFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           S S  L VLA+P  F+  P    + A     VT ECK    P P I     G  I Q   
Sbjct: 401 S-SAQLMVLASPPTFSKSPLRALLKARSGSEVTLECKPQASP-PAISLWKKGNEILQR-- 456

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  + P+  + I N+ K D  +Y C A N  G       + ++     IT  P +   
Sbjct: 457 TERIALLPDGTLKIANVTKRDAASYTCIAKNQFGTASTTGRL-IVTEPTRITMRPTNMEI 515

Query: 231 VDGKTVVLTCRVFGAPKPEVN--WIHNQK-----------ELTGGRYTILETGDLKITDV 277
           + G+++VL C++   P  +V+  W  N +           E  GG  +    GDL I ++
Sbjct: 516 IVGESIVLPCQIASDPALDVSFSWAFNGQLIDFQRDSDHFERVGGSIS----GDLMIRNI 571

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
                G+Y C     + +   S  L VK      D+    E+    +A        D   
Sbjct: 572 QLNHGGKYVCVIDTDVESLSTSAILVVKGPPGPPDKVSVEEI-TDSTAQLSWTPGRDNGS 630

Query: 338 KLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE- 391
            ++   ++   P        ++ P  V  N  + TV   +     ++   A+  +   E 
Sbjct: 631 PITGYIVQARTPFTVGWQAVDTVPEVVNGNMLTATVVGLNAWVEYEFRVVARNAVGLGEP 690

Query: 392 ----AQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ------ 441
               A+      +P  AP++        ++  V++W PV  +   G   GY +       
Sbjct: 691 SPASAKTRTEDAIPDTAPTDVGGGGGTKSE-LVITWEPVPEELQNGEGFGYIIAFRPVGT 749

Query: 442 -TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 500
            TWT        R +I           D   P S    +V A+N    GP S I    + 
Sbjct: 750 VTWT--------RAVISTSAARYVFRNDTIPPFSPFDVKVGAYNNRGEGPFSSIAVVYSA 801

Query: 501 EGVPGTV-QSLEAIPLGSSAFYLKW-VKPEQPNGVLMGYKIKY--QSVKGTKVGPLLERL 556
           E VP    + + A  + ++   + W   P  P  VL GY++ Y     K   +G +    
Sbjct: 802 EEVPSVAPKRVRARSVSAAQIEVSWEALPTIPERVL-GYEVMYWEDDTKPDTIGKVRLSG 860

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGR 611
            Y      T   + GL+ +T Y + +A +  AG G +S  +        P + P N++  
Sbjct: 861 NY------TLVNITGLKANTAYYLSVAAFNTAGPGPQSAPINSTTKKPPPDRAPLNIQWN 914

Query: 612 --GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
             GST   L + W  +  +E  +    Y +  +RH
Sbjct: 915 MIGST---LTLHWNPVVAMETESKVTGYLVLLKRH 946



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 93/390 (23%), Positives = 148/390 (37%), Gaps = 48/390 (12%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS-DQGSYTCEV 106
           + +  + C   G+P PQ  WS +G  I+  +   +   G SLII +++   D G Y C  
Sbjct: 46  DHQATITCEAEGSPPPQYRWSLNGTLIDLGNDYRRHMSGGSLIISNLDKDQDTGVYQCTA 105

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLP----EPEIHWV 160
            N  G   S    L       F  +     +N  E + V   C   G P    E    W+
Sbjct: 106 FNMWGSILSRRASLQFAYLDNFKTQSVRSAVNVREGQGVVLLC---GPPPHSGELTFAWI 162

Query: 161 HNGKP--ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------- 205
            N  P  + Q   + RR +      + I  + +SD GNY C   N++             
Sbjct: 163 FNEYPHFVQQ---DSRRFISQETGSLYIAKVERSDVGNYTCVVNNTVTREKILSSPTPLV 219

Query: 206 -----VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT 260
                V  +    +  H P+   A K+        V L C   G P PE++W        
Sbjct: 220 LRSDGVMGEYEPKIEVHFPDSVPAAKE------SAVKLECFALGNPVPEISWRRTSGVPF 273

Query: 261 GGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEV 319
             +  +  +   L+I +    D+G Y C A N+ G     G ++     H      D  +
Sbjct: 274 PSKVKMKNSNAVLEIPNFQQEDAGTYECMAENRRGKNAARGRISFHAKPHWLQTMADTAL 333

Query: 320 EAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQY 379
               +  + C A   P  K S  WL+  E +  +     VQ  + +L+++  +  DSG Y
Sbjct: 334 SIEGNLFWECKANGKP--KPSYSWLKNGEQVMADGR---VQIENGALSISSLNRSDSGMY 388

Query: 380 TCRAQTELDFIEAQATLTVQVPLEAPSNFT 409
            C A+ +   I + A L V   L +P  F+
Sbjct: 389 QCVAENKHGIIYSSAQLMV---LASPPTFS 415



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 118/290 (40%), Gaps = 37/290 (12%)

Query: 122 VLAAPYFTVEPEF----INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
           +   P +  EP      IN+ + +  T  C+A G P P+  W  NG  I     + RR +
Sbjct: 25  IFQGPRWRTEPSDLILPINSPDHQA-TITCEAEGSPPPQYRWSLNGTLIDLGN-DYRRHM 82

Query: 178 GPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEAPKDEYTV-DGK 234
               + I NL K  DTG Y C A N  G +         A+     T++ +    V +G+
Sbjct: 83  SGGSLIISNLDKDQDTGVYQCTAFNMWGSILSRRASLQFAYLDNFKTQSVRSAVNVREGQ 142

Query: 235 TVVLTCRVFGAPKPE-----VNWIHNQK----ELTGGRYTILETGDLKITDVAFADSGEY 285
            VVL C     P P        WI N+     +    R+   ETG L I  V  +D G Y
Sbjct: 143 GVVLLC----GPPPHSGELTFAWIFNEYPHFVQQDSRRFISQETGSLYIAKVERSDVGNY 198

Query: 286 TCFARNKLGTAQGSGS---LTVKEHTHITDQPEDYEVE-------AGQSAT-FRCNAVSD 334
           TC   N +   +   S   L ++    + +     EV        A +SA    C A+ +
Sbjct: 199 TCVVNNTVTREKILSSPTPLVLRSDGVMGEYEPKIEVHFPDSVPAAKESAVKLECFALGN 258

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           P  ++S  W R S  + F S+ +   SN   L +    + D+G Y C A+
Sbjct: 259 PVPEIS--WRRTSG-VPFPSKVKMKNSNAV-LEIPNFQQEDAGTYECMAE 304


>gi|326933669|ref|XP_003212923.1| PREDICTED: LOW QUALITY PROTEIN: contactin-2-like [Meleagris
           gallopavo]
          Length = 1036

 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 174/633 (27%), Positives = 280/633 (44%), Gaps = 50/633 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLI-IKHVEFSDQGSY 102
           AL  + V L C   G P+P+  W K DG       + SQ    + L+ I++V+F D+G+Y
Sbjct: 246 ALTGQMVTLECFAFGNPVPRIKWRKLDG------SQTSQWISSEPLLHIQNVDFEDEGTY 299

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            CE  N  G   +Y   + + A P +        A     + + C ASG P P + W+ +
Sbjct: 300 ECEAENIKGR-DTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRD 358

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           G+P++      R +V    +    L   D+G Y C A N  G VY    + V A AP+  
Sbjct: 359 GQPLAS---QNRIEVSGGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQALAPDFR 415

Query: 223 EAPKDEYTVDGKT--VVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
             P        ++  V++ C+   APK  V W    + LT   R TI   G L + +++ 
Sbjct: 416 LNPVKRLIPAARSGKVIIPCQPRAAPKATVLWTKGTELLTNSSRVTITADGTLILQNISK 475

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           +D G+YTCFA N +G A  +G L+V++ T IT  P   ++  G++ T +C+A  DP++ L
Sbjct: 476 SDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGENLTLQCHASHDPTMDL 535

Query: 340 SIVWLRGSEPIDFE-SEPRF----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +  W     PID + SE  +    V+     L +  +    SG+YTC AQT +D     A
Sbjct: 536 TFTWSLDDFPIDLDKSEGHYRRASVKEAVGDLAIVNAQLKHSGRYTCTAQTVVDSTSESA 595

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHFRGYKVQTWTEKD 447
           TLTV+ P   P    +  + D     +SW       +P++  S+    R      W +  
Sbjct: 596 TLTVRGPPGPPGGVVVRDIGDT-TVQLSWSRGFDNHSPIARYSIEA--RTLLSNKWKQ-- 650

Query: 448 GEGSIRELIVN-KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               +R   VN +G + T +V   +P      RVLA N    G PS   S + T E  P 
Sbjct: 651 ----MRTNPVNIEGNAETAQVVNLIPWMDYEFRVLASNILGVGEPSLPSSKIRTKEAAPT 706

Query: 506 TVQSLEAIPLGS-SAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S      G+ +   + W     +  NG   GY + ++  KGT+   L  R+P+ ++ 
Sbjct: 707 VAPSGLGGGGGAPNELIINWTPTLRDYQNGDGFGYILSFRK-KGTQEW-LTARVPH-AES 763

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGSTPNN 617
                +   + P T + + +  Y + G+G ES   + Y     P   P  V  +    + 
Sbjct: 764 LHYVYRNESIGPYTPFEVKIKAYNRKGEGPESLTAIVYSAEEEPKVAPFRVTAKAVLSSE 823

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FWRRHNTGEA 649
           + +SW  + + +       Y I +W+  +  EA
Sbjct: 824 MDVSWEPVEQGDMTGVLLGYEIRYWKDGDKEEA 856



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 152/370 (41%), Gaps = 30/370 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           +KV L C     P     W  +G  + + P  R  +   G  +I   V+  D GSY C  
Sbjct: 50  EKVTLMCRARANPPATYRWKMNGTELKMGPDSRY-RLVAGDLVISNPVKAKDAGSYQCVA 108

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVHNGK 164
           +N  G   S    L       F+ E  E +  AE   V F C      P     W+ N  
Sbjct: 109 TNARGTVVSREASLRFGFLQEFSAEEREPVKIAEGWGVMFTCSPPPHYPGLSYRWLLNEF 168

Query: 165 PISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYV---------- 212
           P +  P + RR V      + I     SD GNY C AT+ + ++ K V+           
Sbjct: 169 P-NFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAE 227

Query: 213 NVLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD 271
           +   +AP I  + P D Y + G+ V L C  FG P P + W    ++L G + +   + +
Sbjct: 228 DARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPRIKW----RKLDGSQTSQWISSE 283

Query: 272 --LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
             L I +V F D G Y C A N  G     G + +       D   D E + G    + C
Sbjct: 284 PLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSC 343

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   P  + ++ WLR  +P+  ++    ++ +   L  +K    DSG Y C A+ +   
Sbjct: 344 VASGKP--RPAVRWLRDGQPLASQNR---IEVSGGELRFSKLVLEDSGMYQCVAENKHGT 398

Query: 390 IEAQATLTVQ 399
           + A A LTVQ
Sbjct: 399 VYASAELTVQ 408



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 148/613 (24%), Positives = 230/613 (37%), Gaps = 81/613 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C+  G P P   W +DG P+   +RI     G  L    +   D G Y C   N  G   
Sbjct: 343 CVASGKPRPAVRWLRDGQPLASQNRIEVS--GGELRFSKLVLEDSGMYQCVAENKHGTVY 400

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F + P    I AA    V   C+    P+  + W    + ++ +  
Sbjct: 401 A-SAELTVQALAPDFRLNPVKRLIPAARSGKVIIPCQPRAAPKATVLWTKGTELLTNSS- 458

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  +  +  + ++N+ KSD G Y C A N +G       ++V   A +IT AP     
Sbjct: 459 --RVTITADGTLILQNISKSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 515

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKEL------TGGRY---TILE-TGDLKITDVAFA 280
             G+ + L C     P  ++ +  +  +       + G Y   ++ E  GDL I +    
Sbjct: 516 NVGENLTLQCHASHDPTMDLTFTWSLDDFPIDLDKSEGHYRRASVKEAVGDLAIVNAQLK 575

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            SG YTC A+  + +   S +LTV+            ++              D +++LS
Sbjct: 576 HSGRYTCTAQTVVDSTSESATLTVRGPPGPPGGVVVRDI-------------GDTTVQLS 622

Query: 341 IVWLRGSE---PI-DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE----- 391
             W RG +   PI  +  E R + SN +    T    ++    T +    + +++     
Sbjct: 623 --WSRGFDNHSPIARYSIEARTLLSNKWKQMRTNPVNIEGNAETAQVVNLIPWMDYEFRV 680

Query: 392 -AQATLTV--------------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR 436
            A   L V                P  APS           + +++W P       G   
Sbjct: 681 LASNILGVGEPSLPSSKIRTKEAAPTVAPSGLGGGGGA-PNELIINWTPTLRDYQNGDGF 739

Query: 437 GYKVQTWTEKDGEGSIRELIVNKGEST--TTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
           GY +     K G        V   ES       +   P +    ++ A+N    GP S  
Sbjct: 740 GYILSF--RKKGTQEWLTARVPHAESLHYVYRNESIGPYTPFEVKIKAYNRKGEGPESLT 797

Query: 495 ISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPEQPN--GVLMGYKIKYQSVKGTKVGP 551
               + E  P      + A  + SS   + W   EQ +  GVL+GY+I+Y      K G 
Sbjct: 798 AIVYSAEEEPKVAPFRVTAKAVLSSEMDVSWEPVEQGDMTGVLLGYEIRYW-----KDGD 852

Query: 552 LLERLPYISDP-TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEG 610
             E    +      TSA + GL P+TKY + +  Y +AG G  S        K P     
Sbjct: 853 KEEAADRVRTAGLVTSAHVTGLNPNTKYHVSVRAYNRAGAGPPSPSTNITTIKPPPR--- 909

Query: 611 RGSTPNNLVISWT 623
               P N  ISWT
Sbjct: 910 --RPPGN--ISWT 918



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 108/286 (37%), Gaps = 40/286 (13%)

Query: 126 PYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
           P F  +P    F   + EE VT  C+A   P     W  NG  +   P +  R V  + +
Sbjct: 32  PVFEEQPAHTLFPEGSAEEKVTLMCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDLV 91

Query: 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR 241
               ++  D G+Y C ATN+ G V             E +   ++   + +G  V+ TC 
Sbjct: 92  ISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEEREPVKIAEGWGVMFTC- 150

Query: 242 VFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNK 292
              +P P        W+ N+        G R+    TG+L I     +D G Y+CFA + 
Sbjct: 151 ---SPPPHYPGLSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSH 207

Query: 293 LGTAQGSG-------SLTVKEHTHITDQ-----PEDYEVEAGQSATFRCNAVSDPSLKLS 340
           +     S        SL  ++            P D     GQ  T  C A  +P  ++ 
Sbjct: 208 IDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPRIK 267

Query: 341 IVWLRGSEPIDF-ESEPRF-VQSNDYSLTVTKSSELDSGQYTCRAQ 384
              L GS+   +  SEP   +Q+ D+          D G Y C A+
Sbjct: 268 WRKLDGSQTSQWISSEPLLHIQNVDFE---------DEGTYECEAE 304



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 80/189 (42%), Gaps = 20/189 (10%)

Query: 216 AHAPEITEAPKDEYTVDG---KTVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILET 269
           ++ P   E P      +G   + V L CR    P     W  N  EL  G   RY ++  
Sbjct: 29  SYGPVFEEQPAHTLFPEGSAEEKVTLMCRARANPPATYRWKMNGTELKMGPDSRYRLV-A 87

Query: 270 GDLKITD-VAFADSGEYTCFARNKLGTA-QGSGSLT---VKEHTHITDQPEDYEVEAGQS 324
           GDL I++ V   D+G Y C A N  GT      SL    ++E +   ++ E  ++  G  
Sbjct: 88  GDLVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFS--AEEREPVKIAEGWG 145

Query: 325 ATFRCNAVSDPSL--KLSIVWLRGSEPIDFESE-PRFVQSNDYSLTVTKSSELDSGQYTC 381
             F C   S P     LS  WL    P    ++  RFV     +L + K+   D G Y+C
Sbjct: 146 VMFTC---SPPPHYPGLSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSC 202

Query: 382 RAQTELDFI 390
            A + +DFI
Sbjct: 203 FATSHIDFI 211



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 12/148 (8%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P  AP   T   V+ ++  V SW PV    + G   GY+++ W + D E +  + +   G
Sbjct: 807 PKVAPFRVTAKAVLSSEMDV-SWEPVEQGDMTGVLLGYEIRYWKDGDKEEAA-DRVRTAG 864

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT----PEGVPGTVQSLEAIPLG 516
             T+  V    P +K    V A+N A  GPPS   +  T    P   PG +    +  L 
Sbjct: 865 LVTSAHVTGLNPNTKYHVSVRAYNRAGAGPPSPSTNITTIKPPPRRPPGNI----SWTLT 920

Query: 517 SSAFYLKW--VKPEQPNGVLMGYKIKYQ 542
            S   +KW  V  +     + GYK+ Y+
Sbjct: 921 GSTVTIKWDPVVAQADESAVTGYKMLYR 948


>gi|426249265|ref|XP_004018370.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 1
           [Ovis aries]
          Length = 1225

 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 180/715 (25%), Positives = 306/715 (42%), Gaps = 70/715 (9%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
            L+   + L C   G P P+  W K G  + P    S+ N   +L I++V + D+G+Y C
Sbjct: 268 VLKGDTLLLECFAEGLPTPKVAWDKMGGDL-PKGGESKNNSVDTLKIENVSYEDKGNYRC 326

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
             +N +G A ++   ++V   P +T +P+    +   +    C+A G PEP I W  NG 
Sbjct: 327 TANNFLGSA-THEFHVTVEEPPRWTKKPQSGVYSTGSSGILLCEAEGRPEPTIKWRVNGL 385

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI + P +    + P  I+  N++ + T  Y C A+N  G +  +  ++V+   P I  A
Sbjct: 386 PIERNPFS-GDVISPGEISFTNVQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQTA 444

Query: 225 PKDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFAD 281
            ++ Y TV G +  L C  F +P+  V+W  +   K L G RY + E G L+IT+    D
Sbjct: 445 DEENYATVVGYSAFLHCEFFASPEAIVSWQKVEEAKPLDGSRYHVHENGTLQITETTEED 504

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--L 339
           +G Y+C+  N  G    + +L ++  T++   P++  V    +    C +  D  LK  L
Sbjct: 505 AGSYSCWVENAKGKTAVTANLDIRNATNLRVSPKNPRVPKSHTLELHCESKCDSHLKYSL 564

Query: 340 SIVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
            + W +  E  +   ++   +  +  +LT++  +  D G Y+C A T LD I     +TV
Sbjct: 565 KLSWSKDGEAFEINGTDDGRIIIDGANLTISNVTMEDEGIYSCSAHTALDSIADMTQVTV 624

Query: 399 QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVN 458
               + P N  L +  + +   ++W   +      +   Y V+    K+  G   EL   
Sbjct: 625 LDVPDPPENLHLSERQN-RSVRLTWE--AGDDHNSNISEYIVEFEGNKEEPGRWEELTRV 681

Query: 459 KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLG 516
           +G+ TT  V    P  +   RV+A N      PS       TP   P    Q++      
Sbjct: 682 QGKETTV-VLSLAPYVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQ 740

Query: 517 SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
                +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P
Sbjct: 741 PKEMIIKWEPLKAMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTP 791

Query: 575 ST--KYRIHLAGYTKAGDGAESK-YLFYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPE 627
           +    Y + +      G G E +  + Y     PD    ++G     + LV ++W+ +P+
Sbjct: 792 AVYAPYDVQVQAINHLGSGPEPQSVILYSGEDYPDTAPVIQGVDVINSTLVKVTWSTVPK 851

Query: 628 IEHNAPHFK-YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKD 686
            E    H K Y++ W        W    +LD R             P E+ +++ ++ + 
Sbjct: 852 -ERVHGHLKGYQVNW--------WKTKSLLDGRT-----------HPKEVNILR-FSGQR 890

Query: 687 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
             G +  L            D F   S+    VLA+N    GP SE   F TPEG
Sbjct: 891 NYGMVPSL------------DAF---SEFHLTVLAYNSKGAGPESEPFIFQTPEG 930



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 139/652 (21%), Positives = 255/652 (39%), Gaps = 79/652 (12%)

Query: 54  FCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113
           +C F   P  +TI  K  + +  +             +KHV  S   +     +N + + 
Sbjct: 202 YCCFAAFPRLRTIVQKMPMKLTVNS------------LKHVNDSSSSTENISKANSIKQR 249

Query: 114 KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           K       +L  P  +     I   + +T+  EC A GLP P++ W   G  + +   + 
Sbjct: 250 KP-----RLLLPPPESGSESSITVLKGDTLLLECFAEGLPTPKVAWDKMGGDLPKGGESK 304

Query: 174 RRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDG 233
              V  + + IEN+   D GNY C A N LG    + +V V    P  T+ P+      G
Sbjct: 305 NNSV--DTLKIENVSYEDKGNYRCTANNFLGSATHEFHVTV-EEPPRWTKKPQSGVYSTG 361

Query: 234 KTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCFARN 291
            + +L C   G P+P + W  N   +    ++  ++  G++  T+V    +  Y C A N
Sbjct: 362 SSGILLCEAEGRPEPTIKWRVNGLPIERNPFSGDVISPGEISFTNVQPNHTAVYQCEASN 421

Query: 292 KLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEP 349
             GT   + ++ V +   +  T   E+Y    G SA   C   + P   +S   +  ++P
Sbjct: 422 VHGTILANANIDVVDVRPLIQTADEENYATVVGYSAFLHCEFFASPEAIVSWQKVEEAKP 481

Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFT 409
           +D     R+    + +L +T+++E D+G Y+C  +      + +  +T  + +   +N  
Sbjct: 482 LDGS---RYHVHENGTLQITETTEEDAGSYSCWVEN----AKGKTAVTANLDIRNATNLR 534

Query: 410 LIQVIDAKKAVVSWNPVSPQS----------LRGHFRGYKVQTWTEKDGEG------SIR 453
                     V   NP  P+S             H +     +W+ KDGE          
Sbjct: 535 ----------VSPKNPRVPKSHTLELHCESKCDSHLKYSLKLSWS-KDGEAFEINGTDDG 583

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAI 513
            +I++    T + V        + +   A +   +      ++ VT   VP   ++L   
Sbjct: 584 RIIIDGANLTISNVTMEDEGIYSCSAHTALDSIAD------MTQVTVLDVPDPPENLHLS 637

Query: 514 PLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGL 572
              + +  L W   +  N  +  Y ++++   G K  P   E L  +    TT   +  L
Sbjct: 638 ERQNRSVRLTWEAGDDHNSNISEYIVEFE---GNKEEPGRWEELTRVQGKETTV--VLSL 692

Query: 573 EPSTKYRIHLAGYTKAGDGAESKYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMP 626
            P  +Y+  +    + G    S    +       P KNP N+  + S P  ++I W  + 
Sbjct: 693 APYVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLK 752

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            +E N P  +YR+ W+       W ++ V +     L +     + PY+++V
Sbjct: 753 AMEQNGPGLEYRVTWKPQGAPVEWEEETVTN---HTLRVMTPAVYAPYDVQV 801



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 138/575 (24%), Positives = 236/575 (41%), Gaps = 51/575 (8%)

Query: 53   LFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L C F  +P     W K  +  P++ S      N   +L I      D GSY+C V N  
Sbjct: 459  LHCEFFASPEAIVSWQKVEEAKPLDGSRYHVHEN--GTLQITETTEEDAGSYSCWVENAK 516

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA---SGLP-EPEIHWVHNGKPI 166
            G+  + + +L +  A    V P+     +  T+   C++   S L    ++ W  +G+  
Sbjct: 517  GKT-AVTANLDIRNATNLRVSPKNPRVPKSHTLELHCESKCDSHLKYSLKLSWSKDGEAF 575

Query: 167  S-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
                  + R  +    +TI N+   D G Y C+A  +L  +     V VL    ++ + P
Sbjct: 576  EINGTDDGRIIIDGANLTISNVTMEDEGIYSCSAHTALDSIADMTQVTVL----DVPDPP 631

Query: 226  KDEYTVD--GKTVVLTCRVFGAPKPE-----VNWIHNQKELTGGRYTILETGDLKITDVA 278
            ++ +  +   ++V LT               V +  N++E   GR+  L     K T V 
Sbjct: 632  ENLHLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEE--PGRWEELTRVQGKETTVV 689

Query: 279  FADSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSAT------ 326
             + +     ++   A N++G +Q S      E         P++  V+A Q         
Sbjct: 690  LSLAPYVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWE 749

Query: 327  -FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
              +    + P L+  + W     P+++E E       +++L V   +         +A  
Sbjct: 750  PLKAMEQNGPGLEYRVTWKPQGAPVEWEEE----TVTNHTLRVMTPAVYAPYDVQVQAIN 805

Query: 386  ELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKAVVSWNPVSPQSLRGHFRGYKVQT 442
             L       ++ +    + P    +IQ   VI++    V+W+ V  + + GH +GY+V  
Sbjct: 806  HLGSGPEPQSVILYSGEDYPDTAPVIQGVDVINSTLVKVTWSTVPKERVHGHLKGYQVNW 865

Query: 443  WTEK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
            W  K   DG    +E+ + +  G+     V      S+    VLA+N    GP SE   F
Sbjct: 866  WKTKSLLDGRTHPKEVNILRFSGQRNYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPFIF 925

Query: 498  VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERL 556
             TPEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T ++G L +  
Sbjct: 926  QTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGNLTGYLLQYQIINDTDEIGELNDI- 984

Query: 557  PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
              I+ P+  S +L  L  +TKY+ +L   T  G G
Sbjct: 985  -NITTPSKPSWRLLNLNATTKYKFYLRACTSKGCG 1018



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 136/340 (40%), Gaps = 45/340 (13%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSD-RISQGNYGKSLIIK---HVEFSDQGSYTCEVS 107
           ++ C+  G P P+ +W+KD  P N SD RI   N G +  I    H+    QG Y C  S
Sbjct: 54  QIECVAKGNPEPKFLWNKDDKPFNLSDPRIIVSNNGGTFRIPNDGHISHF-QGKYRCFAS 112

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGK 164
           N +G A S  I+  V   P F  E  + +   E + +   C    GLP   I+W++   +
Sbjct: 113 NKLGIAMSEEIEFIVPNTPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELE 172

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA 218
            I Q       + G   +   N+ + D+ N Y C A        +  +   + VN L H 
Sbjct: 173 HIKQDERVYMSQKG--DLYFANVEEQDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHV 230

Query: 219 --------------------PEITEAPKDE------YTVDGKTVVLTCRVFGAPKPEVNW 252
                               P +   P +         + G T++L C   G P P+V W
Sbjct: 231 NDSSSSTENISKANSIKQRKPRLLLPPPESGSESSITVLKGDTLLLECFAEGLPTPKVAW 290

Query: 253 IHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT 311
                +L  GG         LKI +V++ D G Y C A N LG+A     +TV+E    T
Sbjct: 291 DKMGGDLPKGGESKNNSVDTLKIENVSYEDKGNYRCTANNFLGSATHEFHVTVEEPPRWT 350

Query: 312 DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID 351
            +P+      G S    C A   P  + +I W     PI+
Sbjct: 351 KKPQSGVYSTGSSGILLCEAEGRP--EPTIKWRVNGLPIE 388



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 115/311 (36%), Gaps = 51/311 (16%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN----RITIENLRKSDTGNY 195
           +E    EC A G PEP+  W  + KP + +  +PR  V  N    RI  +       G Y
Sbjct: 50  DEYFQIECVAKGNPEPKFLWNKDDKPFNLS--DPRIIVSNNGGTFRIPNDGHISHFQGKY 107

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A+N LG    +    ++ + P+  +   D   V +G  +VL C    G P   + W+
Sbjct: 108 RCFASNKLGIAMSEEIEFIVPNTPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWM 167

Query: 254 HNQKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEH 307
           + + E      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV   
Sbjct: 168 NIELEHIKQDERVYMSQKGDLYFANVEEQDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSL 227

Query: 308 THITDQPEDYE-----------------------------VEAGQSATFRCNAVSDPSLK 338
            H+ D     E                             V  G +    C A   P+ K
Sbjct: 228 KHVNDSSSSTENISKANSIKQRKPRLLLPPPESGSESSITVLKGDTLLLECFAEGLPTPK 287

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           ++   + G  P   ES+   V     +L +   S  D G Y C A   L      AT   
Sbjct: 288 VAWDKMGGDLPKGGESKNNSVD----TLKIENVSYEDKGNYRCTANNFL----GSATHEF 339

Query: 399 QVPLEAPSNFT 409
            V +E P  +T
Sbjct: 340 HVTVEEPPRWT 350


>gi|395733532|ref|XP_002813561.2| PREDICTED: contactin-3 [Pongo abelii]
          Length = 958

 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 167/625 (26%), Positives = 268/625 (42%), Gaps = 48/625 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P   S +I    +   L I + +  D GSY 
Sbjct: 169 AAKGSTVKLECFALGNPIPQINWRRSDGLPF--SSKIKLRKFSGVLEIPNFQQEDAGSYE 226

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++      +  A E+++ +EC+ASG P+P   W+ NG
Sbjct: 227 CIAENSRGKNVARG-RLTYYAKPHWVQLINDVEIAVEDSLYWECRASGKPKPSYRWLKNG 285

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +       R ++    +TI NL  +D+G + C A N  G VY    + V+A AP+ ++
Sbjct: 286 AALVL---EERIQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSK 342

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
            P  +      G  V L C+   +P+   +W      +    R ++L+ G LKI +V  A
Sbjct: 343 NPMKKLVQVQVGSLVSLDCKPKASPRAHSSWKKGDVSVQEHERISLLKDGGLKIANVTKA 402

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L + 
Sbjct: 403 DAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDII 462

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 463 FTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADL 522

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
            V+     P N  + ++ D   A +SW       +PV+  S++       G++  T    
Sbjct: 523 IVRGSPGPPENVKVDEITDT-TAQLSWKEGKDNHSPVTSYSIQARTPFSVGWQTVT---- 577

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 578 ----TVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 631

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S      GS S   + W  V  E  NG   GY + ++ +    V   ++ +    D 
Sbjct: 632 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPL---GVTTWIQTVVTSPDT 688

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y + +  Y   G+G  S    +F     P   P  V     + + 
Sbjct: 689 PRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSE 748

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FW 641
           + +SW  +P    N     Y + +W
Sbjct: 749 IEVSWNIIPWKLSNGHLLGYEVRYW 773



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 154/618 (24%), Positives = 239/618 (38%), Gaps = 48/618 (7%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V  A+       ++           P   V+ PE + AA
Sbjct: 111 LYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 170

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P S      + +     + I N ++ D G+Y C
Sbjct: 171 KGSTVKLECFALGNPIPQINWRRSDGLPFSS---KIKLRKFSGVLEIPNFQQEDAGSYEC 227

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K+V    L +   P   +   D       ++   CR  G PKP   W+ N
Sbjct: 228 IAENSRG---KNVARGRLTYYAKPHWVQLINDVEIAVEDSLYWECRASGKPKPSYRWLKN 284

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
              L       +E G L I++++  DSG + C A NK G    S  L  V      +  P
Sbjct: 285 GAALVLEERIQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNP 344

Query: 315 ED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
                +V+ G   +  C   + P    S  W +G   +  +   R     D  L +   +
Sbjct: 345 MKKLVQVQVGSLVSLDCKPKASPRAHSS--WKKGD--VSVQEHERISLLKDGGLKIANVT 400

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQ 429
           + D+G YTC A+ +         L V  P     APSN   + V   +  ++        
Sbjct: 401 KADAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSN---MDVSVGESVILPCQVQHDP 457

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
            L   F  Y      +   +GS  E +   G S+   + + +    +   V       + 
Sbjct: 458 LLDIIFTWYFNGALADFKKDGSHFEKV--GGSSSGDLMIRNIQLKHSGKYVCMVQTGVDS 515

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
             S     V   G PG  ++++   +  +   L W + +  +  +  Y I  Q+     V
Sbjct: 516 VSSAADLIV--RGSPGPPENVKVDEITDTTAQLSWKEGKDNHSPVTSYSI--QARTPFSV 571

Query: 550 G-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPF 602
           G   +  +P + D  T +A +  L P  +Y   +    K G G  S      +    VP 
Sbjct: 572 GWQTVTTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 631

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
             P  V G G + + LVI+W  +PE   N   F Y + +R       W Q  V       
Sbjct: 632 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGV-TTWIQTVVTSPDTPR 690

Query: 663 LVLANQPT--FQPYEIKV 678
            V  N+    + PYE+KV
Sbjct: 691 YVFRNESIVPYSPYEVKV 708



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 166/720 (23%), Positives = 278/720 (38%), Gaps = 92/720 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +   +RI   N   +L I ++  +D G + C   N  G   
Sbjct: 269 CRASGKPKPSYRWLKNGAALVLEERIQIEN--GALTISNLSVTDSGMFQCIAENKHGLVY 326

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           S S +L V+A AP F+  P  + +       V+ +CK    P     W      + +   
Sbjct: 327 S-SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPKASPRAHSSWKKGDVSVQEHER 385

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
               K G   + I N+ K+D G Y C A N  G      ++ V+     IT AP +    
Sbjct: 386 ISLLKDG--GLKIANVTKADAGTYTCMAENQFGKANGTTHL-VVTEPTRITLAPSNMDVS 442

Query: 232 DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
            G++V+L C+V   P  ++   W  N             E  GG      +GDL I ++ 
Sbjct: 443 VGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGS----SSGDLMIRNIQ 498

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVK---------EHTHITDQPEDYEVEAGQSATFRC 329
              SG+Y C  +  + +   +  L V+         +   ITD       + G+      
Sbjct: 499 LKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGKDNHSPV 558

Query: 330 NAVS-DPSLKLSIVWLRGS---EPIDFESE-PRFVQSN---DYSLTVTKSSELDSGQYTC 381
            + S       S+ W   +   E ID ++     V+ N   +Y   V  S+++  G+ + 
Sbjct: 559 TSYSIQARTPFSVGWQTVTTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPS- 617

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH------- 434
                   + ++   T +   E P +          + V++W+PV  +   G        
Sbjct: 618 --------LPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVA 669

Query: 435 FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
           FR   V TW +           V + ES        VP S    +V  +N    GP S +
Sbjct: 670 FRPLGVTTWIQTVVTSPDTPRYVFRNES-------IVPYSPYEVKVGVYNNKGEGPFSPV 722

Query: 495 ISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGP 551
            +  + E  P    S + A  L SS   + W  +  +  NG L+GY+++Y +  G +   
Sbjct: 723 TTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNIIPWKLSNGHLLGYEVRYWNGGGKEESS 782

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPD 606
              ++        TSA+L GL+ +  Y   +  Y  AG G  S  +        P + P 
Sbjct: 783 SKVKVA----GNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSATVNVTTKKMPPSQPPG 838

Query: 607 NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ--SELV 664
           NV    +T   ++++W  +  +E+ +    Y++F+R  +     N   VL+  +  +EL+
Sbjct: 839 NVVWN-ATDTKVLLNWEQVKAMENESQVTGYKVFYRTSSQ----NNVQVLNTNKTSAELL 893

Query: 665 LANQPTFQPYEIKVVQTWTEKDGEGS----IRELIVNKGESTTTEVDKFVPASKNFARVL 720
           L   P  + Y I+V  T    DG  S    I  +       +T+ +    P S     VL
Sbjct: 894 L---PIKEDYIIEVKATTDGGDGTSSEQIRIPRITSMDARGSTSAISNVHPMSSYMPIVL 950



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 131/340 (38%), Gaps = 41/340 (12%)

Query: 84  NYGKSLIIKHVEFSDQGSYTCEVSNGVG-----EAK---SYSIDLSVLAAPYFTVEPEFI 135
           N G  ++I      D G+Y C  +N +G     EAK   +Y  D         T+     
Sbjct: 10  NGGNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLEDSDTRTRVTLTIR---- 65

Query: 136 NAAEEETVTFECKASGLPEP----EIHWVHNGKPISQAPPNPRRKVG--PNRITIENLRK 189
              +  + T  C   G PE        W+ N  P S    + RR V      + I  +  
Sbjct: 66  ---DSNSQTLLC---GSPEHFEQLSYAWIFNEYP-SFVEEDSRRFVSQETGHLYISKVEP 118

Query: 190 SDTGNYGCNATNSL--GYVYKDVYVNVL-------AHAPEI-TEAPKDEYTVDGKTVVLT 239
           SD GNY C  T+ +    V       VL        + P+I  + P+      G TV L 
Sbjct: 119 SDVGNYTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLE 178

Query: 240 CRVFGAPKPEVNWIHNQKELTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGTAQG 298
           C   G P P++NW  +       +  + + +G L+I +    D+G Y C A N  G    
Sbjct: 179 CFALGNPIPQINWRRSDGLPFSSKIKLRKFSGVLEIPNFQQEDAGSYECIAENSRGKNVA 238

Query: 299 SGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF 358
            G LT     H      D E+    S  + C A   P  K S  WL+    +  E     
Sbjct: 239 RGRLTYYAKPHWVQLINDVEIAVEDSLYWECRASGKP--KPSYRWLKNGAALVLEER--- 293

Query: 359 VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           +Q  + +LT++  S  DSG + C A+ +   + + A L V
Sbjct: 294 IQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKV 333


>gi|358418120|ref|XP_600040.6| PREDICTED: contactin-4 [Bos taurus]
          Length = 1026

 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 189/725 (26%), Positives = 293/725 (40%), Gaps = 108/725 (14%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P  IW + DG PI    R  + N    L I + +  D G Y C   N 
Sbjct: 243 VKLECFALGNPVPTIIWRRADGKPIATKARRHKSN--GILEIPNFQQEDAGLYECVAENS 300

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P ++ +   I+ A EE V +ECKA+G P+P   W+ NG+P+   
Sbjct: 301 RGKNVAKG-QLTFYAQPNWSQKINDIHVAIEENVFWECKANGRPKPTYRWLKNGEPLLT- 358

Query: 170 PPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
               R ++    G   ITI NL  SD G Y C A N  G ++    ++V+A  P+ +   
Sbjct: 359 ----RDRIHIEQGTLNITIVNL--SDAGMYQCVAENKHGVIFSSAELSVIAVGPDFSRTL 412

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADS 282
               T+   G  VV+ C+   +PKP   W   +  L    R TI E G L+I +V  +D+
Sbjct: 413 LKRVTLVKVGGEVVIECKPKASPKPVHTWKKGRDVLKENERITISEDGSLRIINVTKSDA 472

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   
Sbjct: 473 GSYTCIATNHFGTASSTGNLVVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLNIVFT 532

Query: 343 WLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           W      IDF+ +         Q +   L +       +G+Y C  QT +D + A A L 
Sbjct: 533 WSFNGRLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYICMVQTSVDRLSAAADLI 592

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGE 449
           V+ P   P   T+ ++ D   A +SW P     SP ++      Y +Q  T         
Sbjct: 593 VRGPPGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFSVGWQAV 645

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTP 500
            ++ ELI   G++ T  V    P  +   R +A N    G PS         E +  VTP
Sbjct: 646 NTVPELI--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTP 703

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI- 559
             V G   S   + +         V  E  NG   GY + ++       G ++  L  + 
Sbjct: 704 ANVSGGGGSKSELVITCET-----VPEELQNGRGFGYVVAFRP-----YGKMIWMLTVLA 753

Query: 560 -SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGS 613
            +D +    +   + P + + + +  +   G+G  S           P K P ++  R  
Sbjct: 754 SADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSL 813

Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
           +  ++ + W +  E                                       N+   Q 
Sbjct: 814 SATDIEVFWASPME--------------------------------------KNRGRIQG 835

Query: 674 YEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 733
           YE+K    W   D E + R+ I   G  T+T++     ++     V A+N A  GP S  
Sbjct: 836 YEVKY---WRHDDKEENARK-IRTIGNQTSTKITNLKGSALYHLAVKAYNSAGTGPASAT 891

Query: 734 ISFVT 738
           ++  T
Sbjct: 892 VNVTT 896



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 161/638 (25%), Positives = 239/638 (37%), Gaps = 85/638 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V+ PE +  
Sbjct: 178 NLYIAKVEKSDVGNYTCVVTNTVTNQKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPT 237

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   +GKPI+      RR      + I N ++ D G Y 
Sbjct: 238 AKGTTVKLECFALGNPVPTIIWRRADGKPIAT---KARRHKSNGILEIPNFQQEDAGLYE 294

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P  ++   D +    + V   C+  G PKP   W+ N 
Sbjct: 295 CVAENSRGKNVAKGQLTFYAQ-PNWSQKINDIHVAIEENVFWECKANGRPKPTYRWLKNG 353

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           + L       +E G L IT V  +D+G Y C A NK G    S  L+V     I   P+ 
Sbjct: 354 EPLLTRDRIHIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSV-----IAVGPDF 408

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  K    W +G + +  E+E R   S D SL +
Sbjct: 409 SRTLLKRVTLVKVGGEVVIECKPKASP--KPVHTWKKGRDVLK-ENE-RITISEDGSLRI 464

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
              ++ D+G YTC A        +   L V+ P +     + + V   +  V+       
Sbjct: 465 INVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTKVMVPPSSMDVTVGESIVLPCQVTHD 524

Query: 429 QSLR----GHFRGYKVQTWTEKD------GEGSIRELIVNKGE---------STTTEVDK 469
            SL       F G  +    + D      G+ S  +L++   +            T VD+
Sbjct: 525 HSLNIVFTWSFNGRLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYICMVQTSVDR 584

Query: 470 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPE 528
              A+    R         GPP    +    E    T Q S    P   S   +  ++  
Sbjct: 585 LSAAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQAR 635

Query: 529 QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
            P      + + +Q+V           +P + D  T +A + GL P  +Y          
Sbjct: 636 TP------FSVGWQAVN---------TVPELIDGKTFTATVVGLNPWVEYEFRTVAANVI 680

Query: 589 GDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G G  S      +    +P   P NV G G + + LVI+   +PE   N   F Y + +R
Sbjct: 681 GIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITCETVPEELQNGRGFGYVVAFR 740

Query: 643 RHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
            +     W    +     S  V  N+    F P+E+KV
Sbjct: 741 PYGK-MIWMLTVLASADASRYVFRNESVRPFSPFEVKV 777



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 183/476 (38%), Gaps = 42/476 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  ++            SL+I +  +  D G Y C  +
Sbjct: 44  KKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDAGMYQCIAT 103

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLP----EPEIHWVHN 162
           N  G   S    L       F       ++  + + +   C   G P    E    W+ N
Sbjct: 104 NSFGTIVSREAKLQFAYLENFKPRTRSTVSVRQGQGMVLLC---GPPAHSGELSYAWIFN 160

Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN- 213
             P  Q   + RR V      + I  + KSD GNY C  TN+      LG     +  N 
Sbjct: 161 EYPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNQKVLGPPTPLILRND 217

Query: 214 --VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILET 269
             +  + P+I  + P+   T  G TV L C   G P P + W   + K +          
Sbjct: 218 GVMGEYEPKIEVQFPETVPTAKGTTVKLECFALGNPVPTIIWRRADGKPIATKARRHKSN 277

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I +    D+G Y C A N  G     G LT     + + +  D  V   ++  + C
Sbjct: 278 GILEIPNFQQEDAGLYECVAENSRGKNVAKGQLTFYAQPNWSQKINDIHVAIEENVFWEC 337

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   P  K +  WL+  EP+         Q    +L +T  +  D+G Y C A+ +   
Sbjct: 338 KANGRP--KPTYRWLKNGEPLLTRDRIHIEQG---TLNITIVNLSDAGMYQCVAENKHGV 392

Query: 390 IEAQATLTVQVPLEAPSNFTLIQVIDAKK----AVVSWNP-VSPQSLRGHFRGYKVQTWT 444
           I + A L+V + +    + TL++ +   K     V+   P  SP+ +    +G  V    
Sbjct: 393 IFSSAELSV-IAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVHTWKKGRDVLKEN 451

Query: 445 EK---DGEGSIRELIVNK---GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
           E+     +GS+R + V K   G  T    + F  AS     V+        PPS +
Sbjct: 452 ERITISEDGSLRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTKVMVPPSSM 507



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 117/302 (38%), Gaps = 32/302 (10%)

Query: 119 DLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D   L  P F  EP    F   +EE+ V   C+  G P+P I W  NG  +     + R 
Sbjct: 19  DDYTLHGPIFIQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIG-MDFRY 77

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            V    + I N  K+ D G Y C ATNS G +         A+        +   +V  G
Sbjct: 78  SVVEGSLLINNPNKTQDAGMYQCIATNSFGTIVSREAKLQFAYLENFKPRTRSTVSVRQG 137

Query: 234 KTVVLTCRVFGAP----KPEVNWIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYTC 287
           + +VL C   G P    +    WI N+        R+   ETG+L I  V  +D G YTC
Sbjct: 138 QGMVLLC---GPPAHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTC 194

Query: 288 FARNKLGTAQ-----------GSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              N +   +             G +   E       PE      G +    C A+ +P 
Sbjct: 195 VVTNTVTNQKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTAKGTTVKLECFALGNPV 254

Query: 337 LKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
              +I+W R   +PI   ++ R  +SN   L +    + D+G Y C A+       A+  
Sbjct: 255 --PTIIWRRADGKPI--ATKARRHKSNGI-LEIPNFQQEDAGLYECVAENSRGKNVAKGQ 309

Query: 396 LT 397
           LT
Sbjct: 310 LT 311



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 23/191 (12%)

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            RG  +GY+V+ W   D E + R+ I   G  T+T++     ++     V A+N A  GP 
Sbjct: 830  RGRIQGYEVKYWRHDDKEENARK-IRTIGNQTSTKITNLKGSALYHLAVKAYNSAGTGPA 888

Query: 492  SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
            S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 889  SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWSR 944

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
             +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P    
Sbjct: 945  QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIP--KI 992

Query: 606  DNVEGRGSTPN 616
             N   RG+ P+
Sbjct: 993  SNAYARGAGPS 1003


>gi|354473112|ref|XP_003498780.1| PREDICTED: contactin-4 [Cricetulus griseus]
          Length = 1017

 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 190/733 (25%), Positives = 301/733 (41%), Gaps = 112/733 (15%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+P  +W + DG PI    R  + +    L I + +  D GSY 
Sbjct: 228 AEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSD--GILEIPNFQQEDAGSYE 285

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L   A P +  +   I+ A EE+V +ECKA+G P+P   W+ NG
Sbjct: 286 CVAENSRGKNIAKG-QLIFYAQPNWVQKINDIHVAMEESVFWECKANGRPKPTYRWLKNG 344

Query: 164 KPISQAPPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
            P+       R ++    G   ITI NL  SD G Y C A N  G ++    ++V+A +P
Sbjct: 345 DPLLT-----RDRIQIEQGTLNITIVNL--SDAGMYQCVAENKHGVIFSSAELSVIAESP 397

Query: 220 EITEAPKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITD 276
           + +       T+   G  V++ C+   +P+P   W   ++ L    R TI E G+L+I +
Sbjct: 398 DFSRTLLKRVTLVKVGGEVIIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIIN 457

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
           V  +D+G YTC A N  GTA  +G++ VK+ T +   P   +V  G+S    C    D S
Sbjct: 458 VTKSDAGSYTCIATNHFGTASSTGNVIVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHS 517

Query: 337 LKLSIVWLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           L +   W      IDF+ +         Q +   L +       +G+Y C  QT +D + 
Sbjct: 518 LDIVFTWSFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLT 577

Query: 392 AQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK- 446
           A A L V+ P   P   T+ ++ D   A +SW P     SP ++      Y +Q  T   
Sbjct: 578 AAADLIVRGPPGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFS 630

Query: 447 ---DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EI 494
                  ++ EL+   G++ T  V    P  +   R +A N    G PS         E 
Sbjct: 631 VGWQAVSTVPELV--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEA 688

Query: 495 ISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPL 552
           +  VTP  V G   S        S   + W  V  E  NG   GY + ++       G +
Sbjct: 689 LPEVTPANVSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFR-----PHGKM 736

Query: 553 LERLPYI--SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNP 605
           +  L  +  +D +    +   + P + + + +  +   G+G  S   L Y     P K P
Sbjct: 737 IWMLTVLASADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTLVYSAEEEPTKPP 796

Query: 606 DNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVL 665
            ++  R  +  ++ + W A P                                     + 
Sbjct: 797 ASIFARSLSATDIEVFW-ASP-------------------------------------IG 818

Query: 666 ANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 725
            N+   Q YE+K    W   D E + R+ I   G  T+T++     ++     V A+N A
Sbjct: 819 KNRGRIQGYEVKY---WRHDDKEENARK-IRTVGNQTSTKITNLKGSALYHLAVKAYNSA 874

Query: 726 YNGPPSEIISFVT 738
             GP S  ++  T
Sbjct: 875 GTGPSSATVNVTT 887



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 173/681 (25%), Positives = 259/681 (38%), Gaps = 91/681 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V+ PE + A
Sbjct: 169 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPA 228

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
            +  TV  EC A G P P I W   +GKPI++     RR      + I N ++ D G+Y 
Sbjct: 229 EKGTTVKLECFALGNPVPTILWRRADGKPIAR---KARRHKSDGILEIPNFQQEDAGSYE 285

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P   +   D +    ++V   C+  G PKP   W+ N 
Sbjct: 286 CVAENSRGKNIAKGQLIFYAQ-PNWVQKINDIHVAMEESVFWECKANGRPKPTYRWLKNG 344

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
             L       +E G L IT V  +D+G Y C A NK G    S  L+V     I + P+ 
Sbjct: 345 DPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSV-----IAESPDF 399

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  +    W +G E I  E+E R   S D +L +
Sbjct: 400 SRTLLKRVTLVKVGGEVIIECKPKASP--RPVYTWRKGRE-ILRENE-RITISEDGNLRI 455

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
              ++ D+G YTC A        +   + V+ P +     + + V   +  V+       
Sbjct: 456 INVTKSDAGSYTCIATNHFGTASSTGNVIVKDPTKVMVPPSSMDVTVGESIVLPCQVTHD 515

Query: 429 QSL----RGHFRGYKVQTWTEKD------GEGSIRELIVNKGE---------STTTEVDK 469
            SL       F G+ +    + D      G+ S  +L++   +            T VDK
Sbjct: 516 HSLDIVFTWSFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDK 575

Query: 470 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPE 528
              A+    R         GPP    +    E    T Q S    P   S   +  ++  
Sbjct: 576 LTAAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQAR 626

Query: 529 QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
            P      + + +Q+V           +P + D  T +A + GL P  +Y          
Sbjct: 627 TP------FSVGWQAV---------STVPELVDGKTFTATVVGLNPWVEYEFRTVAANVI 671

Query: 589 GDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F Y + +R
Sbjct: 672 GIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFR 731

Query: 643 RHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
            H     W    +     S  V  N+    F P+E+KV     + +G  S   L+ +  E
Sbjct: 732 PHGK-MIWMLTVLASADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTLVYSAEE 790

Query: 701 STTTEVDKFVPASKNFARVLA 721
             T       P +  FAR L+
Sbjct: 791 EPTK------PPASIFARSLS 805



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 141/369 (38%), Gaps = 30/369 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  ++            SL+I +  +  D G+Y C  +
Sbjct: 35  KKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDAGTYQCIAT 94

Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVHN 162
           N  G   S    L       F T     ++    + +   C   G P    E    W+ N
Sbjct: 95  NSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLC---GPPPHSGELSYAWIFN 151

Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN- 213
             P  Q   + RR V      + I  + KSD GNY C  TN+      LG     +  N 
Sbjct: 152 EYPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRND 208

Query: 214 --VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILET 269
             +  + P+I  + P+      G TV L C   G P P + W   + K +          
Sbjct: 209 GVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSD 268

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I +    D+G Y C A N  G     G L      +   +  D  V   +S  + C
Sbjct: 269 GILEIPNFQQEDAGSYECVAENSRGKNIAKGQLIFYAQPNWVQKINDIHVAMEESVFWEC 328

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   P  K +  WL+  +P+        +Q    +L +T  +  D+G Y C A+ +   
Sbjct: 329 KANGRP--KPTYRWLKNGDPLLTRDR---IQIEQGTLNITIVNLSDAGMYQCVAENKHGV 383

Query: 390 IEAQATLTV 398
           I + A L+V
Sbjct: 384 IFSSAELSV 392



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 112/290 (38%), Gaps = 34/290 (11%)

Query: 119 DLSVLAAPYFTVEPEFIN---AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D   L  P F  EP  I     +EE+ V   C+  G P+P I W  NG  +     + R 
Sbjct: 10  DDYTLHGPVFVQEPSHIMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIG-MDFRY 68

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            V    + I N  K+ D G Y C ATNS G +         A+        +   +V  G
Sbjct: 69  SVVEGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRG 128

Query: 234 KTVVLTCRVFGAPKPEVN-----WIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYT 286
           + +VL C     P P        WI N+        R+   ETG+L I  V  +D G YT
Sbjct: 129 QGMVLLC----GPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYT 184

Query: 287 CFARNK------LG-----TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           C   N       LG       +  G +   E       PE    E G +    C A+ +P
Sbjct: 185 CVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNP 244

Query: 336 SLKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
               +I+W R   +PI  ++       +D  L +    + D+G Y C A+
Sbjct: 245 V--PTILWRRADGKPIARKARR---HKSDGILEIPNFQQEDAGSYECVAE 289



 Score = 42.7 bits (99), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 21/192 (10%)

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
           RG  +GY+V+ W   D E + R+ I   G  T+T++     ++     V A+N A  GP 
Sbjct: 821 RGRIQGYEVKYWRHDDKEENARK-IRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPS 879

Query: 492 SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
           S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 880 SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNR 935

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
            +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P  + 
Sbjct: 936 QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIPKISN 985

Query: 606 DNVEGRGSTPNN 617
               G G++ +N
Sbjct: 986 SYARGSGASTSN 997


>gi|432092481|gb|ELK25096.1| Contactin-4 [Myotis davidii]
          Length = 1118

 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 120/383 (31%), Positives = 176/383 (45%), Gaps = 16/383 (4%)

Query: 52  ELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L C   G P+P  +W + DG PI    R  Q +    L I + +  D G Y C   N  
Sbjct: 215 RLECFALGNPVPTIVWRRADGKPIARKARRHQSD--GILEIPNFQQEDAGLYECVAENSR 272

Query: 111 GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAP 170
           G+  +    L+  A P +  +   I  A E++V++EC+ASG P P   W+ NG+P+    
Sbjct: 273 GKNVARG-QLTFYAQPNWIQKISDIQVAIEDSVSWECRASGRPRPTYRWLKNGEPLFA-- 329

Query: 171 PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
              R  +    + I  +  +D G Y C A N  G V+    ++V+A  P+ + A     T
Sbjct: 330 -QDRVHIEQGSLNITGVSLADAGMYQCVAENRHGAVFSSAELSVIAAGPDFSRALLKRVT 388

Query: 231 VD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADSGEYTC 287
           +   G  VV+ C+   +PKP   W   +  L    R TI E G L+I +V  AD+G YTC
Sbjct: 389 LVKVGGDVVIECKPKASPKPIYTWKKGRAVLRESERITISEDGSLRIVNVTKADAGSYTC 448

Query: 288 FARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS 347
            A N  GTA  +GSL VK+ T +T  P   +V  G+S    C    D SL +   W    
Sbjct: 449 VATNHFGTASSTGSLVVKDPTRVTVPPASMDVTVGESIVLTCQVRQDHSLDIVFTWSFNG 508

Query: 348 EPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPL 402
             IDF  +         Q +   L +       +G+Y C  QT +D + A A L V+ P 
Sbjct: 509 HRIDFNRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCTVQTSVDQLSAAADLIVRGPP 568

Query: 403 EAPSNFTLIQVIDAKKAVVSWNP 425
             P   T+ ++ D   A +SW+P
Sbjct: 569 GPPEAVTIDEITDT-TAQLSWSP 590



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 135/333 (40%), Gaps = 32/333 (9%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       +            P   V+ P+ +  
Sbjct: 149 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLTLRNDGVMGEYEPKIEVQFPDTVPT 208

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  T   EC A G P P I W   +GKPI++     RR      + I N ++ D G Y 
Sbjct: 209 AKGGTARLECFALGNPVPTIVWRRADGKPIAR---KARRHQSDGILEIPNFQQEDAGLYE 265

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P   +   D       +V   CR  G P+P   W+ N 
Sbjct: 266 CVAENSRGKNVARGQLTFYAQ-PNWIQKISDIQVAIEDSVSWECRASGRPRPTYRWLKNG 324

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           + L       +E G L IT V+ AD+G Y C A N+ G    S  L+V     I   P+ 
Sbjct: 325 EPLFAQDRVHIEQGSLNITGVSLADAGMYQCVAENRHGAVFSSAELSV-----IAAGPDF 379

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  K    W +G   +  ESE R   S D SL +
Sbjct: 380 SRALLKRVTLVKVGGDVVIECKPKASP--KPIYTWKKG-RAVLRESE-RITISEDGSLRI 435

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
              ++ D+G YTC A        +  +L V+ P
Sbjct: 436 VNVTKADAGSYTCVATNHFGTASSTGSLVVKDP 468



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 3/81 (3%)

Query: 600 VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
           VP   P NV G G + + LVI+W  +PE   N   F Y + +R H T   W    +    
Sbjct: 753 VPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRPHGT-VIWMLTVLASAD 811

Query: 660 QSELVLANQPT--FQPYEIKV 678
               V  N+    F P+E++V
Sbjct: 812 ACRYVFRNESVRPFSPFEVRV 832



 Score = 39.7 bits (91), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 22/196 (11%)

Query: 428  PQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            P+  RG  +GY+V+ W   D E + R+ I   G  T+T++     ++     V A+N A 
Sbjct: 915  PERNRGRIQGYEVKYWRHDDKEENARK-IRTFGNQTSTKITNLQGSALYHLAVKAYNTAG 973

Query: 488  NGPPSEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYK-IK 540
             GP S  ++  T    P   PG V    +     S   L W  VK  +    + GYK + 
Sbjct: 974  TGPSSATVNVTTRKPPPSQAPGNVVWNSS----DSKIVLNWDQVKALENESDVRGYKQVL 1029

Query: 541  YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV 600
            Y+  + ++          + +   TS +L+ L     Y I +   +  GDG+ S+ +  +
Sbjct: 1030 YRWSRQSRTS--------VIETNQTSVELS-LPLGEDYIIEIRPVSDGGDGSASQQI-RI 1079

Query: 601  PFKNPDNVEGRGSTPN 616
            P        G G+ P+
Sbjct: 1080 PKMTNAYARGGGAGPS 1095



 Score = 39.3 bits (90), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 86/209 (41%), Gaps = 28/209 (13%)

Query: 233 GKTVVLTCRVFGAP----KPEVNWIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYT 286
           G+ +VL C   G P    +    WI N+        R+   ETG+L I  V  +D G YT
Sbjct: 108 GQGMVLLC---GPPAHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYT 164

Query: 287 CFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATFRCNAVSDP 335
           C   N +   +  G    LT++    + +     EV+         G +A   C A+ +P
Sbjct: 165 CVVTNTVTNHKVLGPPTPLTLRNDGVMGEYEPKIEVQFPDTVPTAKGGTARLECFALGNP 224

Query: 336 SLKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
               +IVW R   +PI  ++  R  QS D  L +    + D+G Y C A+       A+ 
Sbjct: 225 V--PTIVWRRADGKPIARKA--RRHQS-DGILEIPNFQQEDAGLYECVAENSRGKNVARG 279

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSW 423
            LT           + IQV  A +  VSW
Sbjct: 280 QLTFYAQPNWIQKISDIQV--AIEDSVSW 306


>gi|426249267|ref|XP_004018371.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
           [Ovis aries]
          Length = 1209

 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 180/715 (25%), Positives = 306/715 (42%), Gaps = 70/715 (9%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
            L+   + L C   G P P+  W K G  + P    S+ N   +L I++V + D+G+Y C
Sbjct: 252 VLKGDTLLLECFAEGLPTPKVAWDKMGGDL-PKGGESKNNSVDTLKIENVSYEDKGNYRC 310

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
             +N +G A ++   ++V   P +T +P+    +   +    C+A G PEP I W  NG 
Sbjct: 311 TANNFLGSA-THEFHVTVEEPPRWTKKPQSGVYSTGSSGILLCEAEGRPEPTIKWRVNGL 369

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI + P +    + P  I+  N++ + T  Y C A+N  G +  +  ++V+   P I  A
Sbjct: 370 PIERNPFS-GDVISPGEISFTNVQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQTA 428

Query: 225 PKDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFAD 281
            ++ Y TV G +  L C  F +P+  V+W  +   K L G RY + E G L+IT+    D
Sbjct: 429 DEENYATVVGYSAFLHCEFFASPEAIVSWQKVEEAKPLDGSRYHVHENGTLQITETTEED 488

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--L 339
           +G Y+C+  N  G    + +L ++  T++   P++  V    +    C +  D  LK  L
Sbjct: 489 AGSYSCWVENAKGKTAVTANLDIRNATNLRVSPKNPRVPKSHTLELHCESKCDSHLKYSL 548

Query: 340 SIVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
            + W +  E  +   ++   +  +  +LT++  +  D G Y+C A T LD I     +TV
Sbjct: 549 KLSWSKDGEAFEINGTDDGRIIIDGANLTISNVTMEDEGIYSCSAHTALDSIADMTQVTV 608

Query: 399 QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVN 458
               + P N  L +  + +   ++W   +      +   Y V+    K+  G   EL   
Sbjct: 609 LDVPDPPENLHLSERQN-RSVRLTWE--AGDDHNSNISEYIVEFEGNKEEPGRWEELTRV 665

Query: 459 KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLG 516
           +G+ TT  V    P  +   RV+A N      PS       TP   P    Q++      
Sbjct: 666 QGKETTV-VLSLAPYVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQ 724

Query: 517 SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
                +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P
Sbjct: 725 PKEMIIKWEPLKAMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTP 775

Query: 575 ST--KYRIHLAGYTKAGDGAESK-YLFYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPE 627
           +    Y + +      G G E +  + Y     PD    ++G     + LV ++W+ +P+
Sbjct: 776 AVYAPYDVQVQAINHLGSGPEPQSVILYSGEDYPDTAPVIQGVDVINSTLVKVTWSTVPK 835

Query: 628 IEHNAPHFK-YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKD 686
            E    H K Y++ W        W    +LD R             P E+ +++ ++ + 
Sbjct: 836 -ERVHGHLKGYQVNW--------WKTKSLLDGRT-----------HPKEVNILR-FSGQR 874

Query: 687 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
             G +  L            D F   S+    VLA+N    GP SE   F TPEG
Sbjct: 875 NYGMVPSL------------DAF---SEFHLTVLAYNSKGAGPESEPFIFQTPEG 914



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 125/571 (21%), Positives = 229/571 (40%), Gaps = 62/571 (10%)

Query: 135 INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGN 194
           I   + +T+  EC A GLP P++ W   G  + +   +    V  + + IEN+   D GN
Sbjct: 250 ITVLKGDTLLLECFAEGLPTPKVAWDKMGGDLPKGGESKNNSV--DTLKIENVSYEDKGN 307

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           Y C A N LG    + +V V    P  T+ P+      G + +L C   G P+P + W  
Sbjct: 308 YRCTANNFLGSATHEFHVTV-EEPPRWTKKPQSGVYSTGSSGILLCEAEGRPEPTIKWRV 366

Query: 255 NQKELTGGRYT--ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI-- 310
           N   +    ++  ++  G++  T+V    +  Y C A N  GT   + ++ V +   +  
Sbjct: 367 NGLPIERNPFSGDVISPGEISFTNVQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQ 426

Query: 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTK 370
           T   E+Y    G SA   C   + P   +S   +  ++P+D     R+    + +L +T+
Sbjct: 427 TADEENYATVVGYSAFLHCEFFASPEAIVSWQKVEEAKPLDGS---RYHVHENGTLQITE 483

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQS 430
           ++E D+G Y+C  +      + +  +T  + +   +N            V   NP  P+S
Sbjct: 484 TTEEDAGSYSCWVEN----AKGKTAVTANLDIRNATNLR----------VSPKNPRVPKS 529

Query: 431 ----------LRGHFRGYKVQTWTEKDGEG------SIRELIVNKGESTTTEVDKFVPAS 474
                        H +     +W+ KDGE           +I++    T + V       
Sbjct: 530 HTLELHCESKCDSHLKYSLKLSWS-KDGEAFEINGTDDGRIIIDGANLTISNVTMEDEGI 588

Query: 475 KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
            + +   A +   +      ++ VT   VP   ++L      + +  L W   +  N  +
Sbjct: 589 YSCSAHTALDSIAD------MTQVTVLDVPDPPENLHLSERQNRSVRLTWEAGDDHNSNI 642

Query: 535 MGYKIKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
             Y ++++   G K  P   E L  +    TT   +  L P  +Y+  +    + G    
Sbjct: 643 SEYIVEFE---GNKEEPGRWEELTRVQGKETTV--VLSLAPYVRYQFRVIAMNEVGRSQP 697

Query: 594 SKYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTG 647
           S    +       P KNP N+  + S P  ++I W  +  +E N P  +YR+ W+     
Sbjct: 698 SHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKAMEQNGPGLEYRVTWKPQGAP 757

Query: 648 EAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
             W ++ V +     L +     + PY+++V
Sbjct: 758 VEWEEETVTN---HTLRVMTPAVYAPYDVQV 785



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 138/575 (24%), Positives = 236/575 (41%), Gaps = 51/575 (8%)

Query: 53   LFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L C F  +P     W K  +  P++ S      N   +L I      D GSY+C V N  
Sbjct: 443  LHCEFFASPEAIVSWQKVEEAKPLDGSRYHVHEN--GTLQITETTEEDAGSYSCWVENAK 500

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA---SGLP-EPEIHWVHNGKPI 166
            G+  + + +L +  A    V P+     +  T+   C++   S L    ++ W  +G+  
Sbjct: 501  GKT-AVTANLDIRNATNLRVSPKNPRVPKSHTLELHCESKCDSHLKYSLKLSWSKDGEAF 559

Query: 167  S-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
                  + R  +    +TI N+   D G Y C+A  +L  +     V VL    ++ + P
Sbjct: 560  EINGTDDGRIIIDGANLTISNVTMEDEGIYSCSAHTALDSIADMTQVTVL----DVPDPP 615

Query: 226  KDEYTVD--GKTVVLTCRVFGAPKPE-----VNWIHNQKELTGGRYTILETGDLKITDVA 278
            ++ +  +   ++V LT               V +  N++E   GR+  L     K T V 
Sbjct: 616  ENLHLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEE--PGRWEELTRVQGKETTVV 673

Query: 279  FADSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSAT------ 326
             + +     ++   A N++G +Q S      E         P++  V+A Q         
Sbjct: 674  LSLAPYVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWE 733

Query: 327  -FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
              +    + P L+  + W     P+++E E       +++L V   +         +A  
Sbjct: 734  PLKAMEQNGPGLEYRVTWKPQGAPVEWEEE----TVTNHTLRVMTPAVYAPYDVQVQAIN 789

Query: 386  ELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKAVVSWNPVSPQSLRGHFRGYKVQT 442
             L       ++ +    + P    +IQ   VI++    V+W+ V  + + GH +GY+V  
Sbjct: 790  HLGSGPEPQSVILYSGEDYPDTAPVIQGVDVINSTLVKVTWSTVPKERVHGHLKGYQVNW 849

Query: 443  WTEK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
            W  K   DG    +E+ + +  G+     V      S+    VLA+N    GP SE   F
Sbjct: 850  WKTKSLLDGRTHPKEVNILRFSGQRNYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPFIF 909

Query: 498  VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERL 556
             TPEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T ++G L +  
Sbjct: 910  QTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGNLTGYLLQYQIINDTDEIGELNDI- 968

Query: 557  PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
              I+ P+  S +L  L  +TKY+ +L   T  G G
Sbjct: 969  -NITTPSKPSWRLLNLNATTKYKFYLRACTSKGCG 1002



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 137/329 (41%), Gaps = 39/329 (11%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSD-RISQGNYGKSLIIK---HVEFSDQGSYTCEVS 107
           ++ C+  G P P+ +W+KD  P N SD RI   N G +  I    H+    QG Y C  S
Sbjct: 54  QIECVAKGNPEPKFLWNKDDKPFNLSDPRIIVSNNGGTFRIPNDGHISHF-QGKYRCFAS 112

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGK 164
           N +G A S  I+  V   P F  E  + +   E + +   C    GLP   I+W++   +
Sbjct: 113 NKLGIAMSEEIEFIVPNTPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELE 172

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGN-YGC--------------------NATNSL 203
            I Q       + G   +   N+ + D+ N Y C                    N++NS+
Sbjct: 173 HIKQDERVYMSQKG--DLYFANVEEQDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNSI 230

Query: 204 GYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGG 262
               K     +L   PE + +      + G T++L C   G P P+V W     +L  GG
Sbjct: 231 ----KQRKPRLLLPPPE-SGSESSITVLKGDTLLLECFAEGLPTPKVAWDKMGGDLPKGG 285

Query: 263 RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAG 322
                    LKI +V++ D G Y C A N LG+A     +TV+E    T +P+      G
Sbjct: 286 ESKNNSVDTLKIENVSYEDKGNYRCTANNFLGSATHEFHVTVEEPPRWTKKPQSGVYSTG 345

Query: 323 QSATFRCNAVSDPSLKLSIVWLRGSEPID 351
            S    C A   P  + +I W     PI+
Sbjct: 346 SSGILLCEAEGRP--EPTIKWRVNGLPIE 372



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 115/295 (38%), Gaps = 35/295 (11%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN----RITIENLRKSDTGNY 195
           +E    EC A G PEP+  W  + KP + +  +PR  V  N    RI  +       G Y
Sbjct: 50  DEYFQIECVAKGNPEPKFLWNKDDKPFNLS--DPRIIVSNNGGTFRIPNDGHISHFQGKY 107

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A+N LG    +    ++ + P+  +   D   V +G  +VL C    G P   + W+
Sbjct: 108 RCFASNKLGIAMSEEIEFIVPNTPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWM 167

Query: 254 HNQKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEH 307
           + + E      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV   
Sbjct: 168 NIELEHIKQDERVYMSQKGDLYFANVEEQDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSS 227

Query: 308 THITDQ--------PE-----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFES 354
             I  +        PE        V  G +    C A   P+ K++   + G  P   ES
Sbjct: 228 NSIKQRKPRLLLPPPESGSESSITVLKGDTLLLECFAEGLPTPKVAWDKMGGDLPKGGES 287

Query: 355 EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFT 409
           +   V     +L +   S  D G Y C A   L      AT    V +E P  +T
Sbjct: 288 KNNSVD----TLKIENVSYEDKGNYRCTANNFL----GSATHEFHVTVEEPPRWT 334


>gi|395516508|ref|XP_003762429.1| PREDICTED: contactin-4 [Sarcophilus harrisii]
          Length = 1094

 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 186/722 (25%), Positives = 291/722 (40%), Gaps = 101/722 (13%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P  IW + DG PI    R  + N    L I + +  D G Y C   N 
Sbjct: 310 VKLECFALGNPVPTIIWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGLYECVAENS 367

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P +  +   I+ A EE++ +ECKA+G P+P   W+ NG+ +   
Sbjct: 368 RGKNVARG-QLTFYAQPNWIQKINDIHVAIEESIFWECKANGRPKPTYRWLKNGESLLT- 425

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
               R ++    + I  +  SD G Y C A N  G ++    ++V+A  P+ +       
Sbjct: 426 --QDRIQIEHGTLNITTVNLSDAGMYQCVAENRHGIIFASAELSVIALGPDFSRTLLKRM 483

Query: 230 TVD--GKTVVLTCRVFGAPKPEVNWIHNQKELT--GGRYTILETGDLKITDVAFADSGEY 285
           T+   G  VV+ C+   +P+P   W    KE+     R T  E G L+I +V  +D+G Y
Sbjct: 484 TLVKVGGEVVIECKPKASPRPVYTW-KKGKEIVRENERITFSEDGSLRIMNVTKSDAGSY 542

Query: 286 TCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLR 345
           TC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   W  
Sbjct: 543 TCIATNHFGTASSTGNLVVKDPTRLLVPPSSMDVTVGESIVLPCQVSHDHSLDIVFTWSF 602

Query: 346 GSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
               IDF+ +         Q +   L +       +G+Y C  QT +D I A A L V+ 
Sbjct: 603 NGRLIDFDKDGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKISATADLIVRG 662

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
           P   P   T+ ++ D   A +SW P     SP ++      Y +Q  T          ++
Sbjct: 663 PPGPPEAVTIDEITDT-TAQLSWRPGADNHSPVTM------YVIQARTPFSVGWQAVNTV 715

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTPEGV 503
            ELI   G + T  V    P  +   RV+A N    G PS         E +  VTP  V
Sbjct: 716 PELI--DGRTFTATVVSLNPWVEYEFRVVAANTIGIGEPSRPSEKRRTEEALPEVTPANV 773

Query: 504 PGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
            G   S        S   + W  V  E  NG   GY + ++          ++ +   +D
Sbjct: 774 SGGGGS-------KSELVITWETVPEELQNGGGFGYVVAFRPFGKVS---WMQTVLASAD 823

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPN 616
            +    +   L P + Y + +  Y   G+G+ S           P K P ++  R  +  
Sbjct: 824 ASRYVFRNESLPPFSPYEVKVGVYNNKGEGSFSPVTVVYSAEEEPTKPPPSIFARSLSAT 883

Query: 617 NLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEI 676
           ++ + W+                                     S L   ++   Q YE+
Sbjct: 884 DIEVFWS-------------------------------------SPLESLSKGRIQGYEV 906

Query: 677 KVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 736
           K    W+  D E + R+ I   G  T+T++     ++     V A+N A  GP S  ++ 
Sbjct: 907 KY---WSHDDKEENARK-IRTIGNQTSTKITNLKGSALYHLAVKAYNTAGTGPYSVTVNV 962

Query: 737 VT 738
            T
Sbjct: 963 TT 964



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 167/645 (25%), Positives = 247/645 (38%), Gaps = 65/645 (10%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V+ PE +  
Sbjct: 245 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPT 304

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   +GKPI++     RR      + I N ++ D G Y 
Sbjct: 305 AKGATVKLECFALGNPVPTIIWRRADGKPIAR---KARRHKSNGILEIPNFQQEDAGLYE 361

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P   +   D +    +++   C+  G PKP   W+ N 
Sbjct: 362 CVAENSRGKNVARGQLTFYAQ-PNWIQKINDIHVAIEESIFWECKANGRPKPTYRWLKNG 420

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           + L       +E G L IT V  +D+G Y C A N+ G    S  L+V     I   P+ 
Sbjct: 421 ESLLTQDRIQIEHGTLNITTVNLSDAGMYQCVAENRHGIIFASAELSV-----IALGPDF 475

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  +    W +G E I  E+E R   S D SL +
Sbjct: 476 SRTLLKRMTLVKVGGEVVIECKPKASP--RPVYTWKKGKE-IVRENE-RITFSEDGSLRI 531

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
              ++ D+G YTC A        +   L V+ P       + + V   +  V+       
Sbjct: 532 MNVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRLLVPPSSMDVTVGESIVLPCQVSHD 591

Query: 429 QSLRGHFRGYKVQTWT--------EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
            SL   F      TW+        +KDG+   R    +          +   A K    V
Sbjct: 592 HSLDIVF------TWSFNGRLIDFDKDGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMV 645

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
                  +     I+      G PG  +++    +  +   L W      +  +  Y I 
Sbjct: 646 QTSVDKISATADLIV-----RGPPGPPEAVTIDEITDTTAQLSWRPGADNHSPVTMYVI- 699

Query: 541 YQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES----- 594
            Q+     VG   +  +P + D  T +A +  L P  +Y   +      G G  S     
Sbjct: 700 -QARTPFSVGWQAVNTVPELIDGRTFTATVVSLNPWVEYEFRVVAANTIGIGEPSRPSEK 758

Query: 595 -KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQD 653
            +    +P   P NV G G + + LVI+W  +PE   N   F Y + +R      +W Q 
Sbjct: 759 RRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGGGFGYVVAFRPFGK-VSWMQT 817

Query: 654 DVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
            +     S  V  N+  P F PYE+K V  +  K GEGS   + V
Sbjct: 818 VLASADASRYVFRNESLPPFSPYEVK-VGVYNNK-GEGSFSPVTV 860



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 175/441 (39%), Gaps = 39/441 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  ++            SL+I +  +  D G+Y C  +
Sbjct: 111 KKVKLNCEVKGNPKPLIRWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDAGTYQCIAT 170

Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVHN 162
           N  G   S    L       F T     ++  + + +   C   G P    E    W+ N
Sbjct: 171 NSFGTIVSKEAKLQFAYLENFKTRTRSTVSVRQGQGMVLLC---GPPPHSGELSYAWIFN 227

Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN- 213
             P  Q   + RR V      + I  + KSD GNY C  TN+      LG     +  N 
Sbjct: 228 EYPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRND 284

Query: 214 --VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILET 269
             +  + P+I  + P+   T  G TV L C   G P P + W   + K +          
Sbjct: 285 GVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHKSN 344

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I +    D+G Y C A N  G     G LT     +   +  D  V   +S  + C
Sbjct: 345 GILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAIEESIFWEC 404

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   P  K +  WL+  E +  +     +Q    +L +T  +  D+G Y C A+     
Sbjct: 405 KANGRP--KPTYRWLKNGESLLTQDR---IQIEHGTLNITTVNLSDAGMYQCVAENRHGI 459

Query: 390 IEAQATLTVQVPLEAPSNFTLIQVIDAKK----AVVSWNP-VSPQSLRGHFRGYKVQTWT 444
           I A A L+V + L    + TL++ +   K     V+   P  SP+ +    +G ++    
Sbjct: 460 IFASAELSV-IALGPDFSRTLLKRMTLVKVGGEVVIECKPKASPRPVYTWKKGKEIVREN 518

Query: 445 EK---DGEGSIRELIVNKGES 462
           E+     +GS+R + V K ++
Sbjct: 519 ERITFSEDGSLRIMNVTKSDA 539



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 117/303 (38%), Gaps = 34/303 (11%)

Query: 119 DLSVLAAPYFTVEPEFIN---AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D + L  P F  EP  +     +EE+ V   C+  G P+P I W  NG  +     + R 
Sbjct: 86  DDNTLHGPIFIHEPSHVMFPLDSEEKKVKLNCEVKGNPKPLIRWKLNGTDVDIG-MDFRY 144

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            V    + I N  K+ D G Y C ATNS G +         A+        +   +V  G
Sbjct: 145 SVVEGSLLINNPNKTQDAGTYQCIATNSFGTIVSKEAKLQFAYLENFKTRTRSTVSVRQG 204

Query: 234 KTVVLTCRVFGAPKPEVN-----WIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYT 286
           + +VL C     P P        WI N+        R+   ETG+L I  V  +D G YT
Sbjct: 205 QGMVLLC----GPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYT 260

Query: 287 CFARNK------LG-----TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           C   N       LG       +  G +   E       PE      G +    C A+ +P
Sbjct: 261 CVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNP 320

Query: 336 SLKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
               +I+W R   +PI    + R  +SN   L +    + D+G Y C A+       A+ 
Sbjct: 321 V--PTIIWRRADGKPI--ARKARRHKSNGI-LEIPNFQQEDAGLYECVAENSRGKNVARG 375

Query: 395 TLT 397
            LT
Sbjct: 376 QLT 378



 Score = 39.7 bits (91), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 21/192 (10%)

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            +G  +GY+V+ W+  D E + R+ I   G  T+T++     ++     V A+N A  GP 
Sbjct: 898  KGRIQGYEVKYWSHDDKEENARK-IRTIGNQTSTKITNLKGSALYHLAVKAYNTAGTGPY 956

Query: 492  SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
            S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 957  SVTVNVTTKKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNR 1012

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
             +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P  + 
Sbjct: 1013 QSSTS--------VIETNKTSVELS-LPFDEDYIIEIRPFSDGGDGSSSEQI-RIPKISS 1062

Query: 606  DNVEGRGSTPNN 617
                G G++ +N
Sbjct: 1063 AYARGSGASTSN 1074


>gi|195132705|ref|XP_002010783.1| GI21512 [Drosophila mojavensis]
 gi|193907571|gb|EDW06438.1| GI21512 [Drosophila mojavensis]
          Length = 2220

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 176/658 (26%), Positives = 264/658 (40%), Gaps = 102/658 (15%)

Query: 52  ELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGN--YGKSLIIKHVEFSDQGSYTCEVS 107
           EL CI    PL +  TIW KDG+P+  +  +   N  + ++L +     S  G YTC+V 
Sbjct: 278 ELQCIANARPLHELETIWLKDGLPVENAGILHTLNNPWNRTLALLQANSSHAGEYTCQVR 337

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET-------VTFECKASGLPEPEIHWV 160
              G  ++ +    V    Y    P F      ET       V   C   G P P++ W 
Sbjct: 338 LRSGGFRTVTASAHV----YILEPPMFFTPMRAETFGDFGGQVMLPCDVVGDPTPQVQWF 393

Query: 161 HNGKPI-SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
            N + I +Q           N + I+ L   D G + C ATN  G      ++ V   AP
Sbjct: 394 RNAERIDAQLLSGGYSVKADNTLIIKKLTLEDEGMFQCLATNEAGEKSAYTWLRVKTSAP 453

Query: 220 EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT--GGRYTILETGDLKITDV 277
            + + P++   +DGK   ++CR  GAP P + WI+N+ +L     R  ILE+GDL I+ +
Sbjct: 454 IMEQPPQNVTALDGKDATISCRAAGAPNPNITWIYNETQLVELSSRVQILESGDLLISSI 513

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
             AD+G Y C   N+ G+ +G   L+V   T I   P D  V  G +AT +C   SDPS+
Sbjct: 514 RAADAGLYICVRANEAGSVKGEAYLSVLVRTQIIQPPVDTTVLLGLTATLQCKVSSDPSV 573

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
             +I W R  +     +  R     D  L +      D G Y C   +        A L+
Sbjct: 574 PYNIDWYREGQSTPIVNSQRVGVQADGQLEIQAVRASDVGSYACVVTSPGGNETRSAMLS 633

Query: 398 V-QVPLEAPSNFTLIQVID--AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRE 454
           V ++P   PSN  + ++ +   +   VSW P           G+        DG   I +
Sbjct: 634 VIELPF-PPSNVRVERLPEPHQRSINVSWTP-----------GF--------DGNSPIAK 673

Query: 455 LIVNKGESTTTEVDKFV------------------------------PASKNFARVLAFN 484
            I+ + E   +E++KFV                               A+    RV A N
Sbjct: 674 FIIQRRE--VSELEKFVGPVPDPLLNWITELTNVSADQRWIVLDNLKAATVYQFRVSAVN 731

Query: 485 GAYNGPPSEIISFV-----TPEGVP-GTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMG 536
               G PSE  + V      P G P G V S  ++    S    +W  P  E  NG ++G
Sbjct: 732 RVGEGSPSEPSNIVELPQEAPSGPPVGFVGSARSM----SEIITQWQPPLEEHRNGQILG 787

Query: 537 YKIKYQSVKGTKVGPLLERLPYISDPTTTSAK----LAGLEPSTKYRIHLAGYTKAG--- 589
           Y ++Y+      V       P+     T  A+    +  L     Y + +A Y   G   
Sbjct: 788 YILRYRLYGYNNV-------PWSYQNITNEAQRNFLIQELITWKDYIVQIAAYNNMGVGV 840

Query: 590 --DGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI-FWRRH 644
             +GA+ K    VP   P N+         + ISWT     + N  +  Y+I  W++H
Sbjct: 841 YTEGAKIKTKEGVPEAPPTNLRVLALNSTAVQISWTPPNPQQINGINQGYKIQAWQQH 898



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 143/612 (23%), Positives = 247/612 (40%), Gaps = 97/612 (15%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYG----KSLIIKHVEFSDQGSYTCE 105
           +V L C   G P PQ  W ++   I+   ++  G Y      +LIIK +   D+G + C 
Sbjct: 375 QVMLPCDVVGDPTPQVQWFRNAERIDA--QLLSGGYSVKADNTLIIKKLTLEDEGMFQCL 432

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            +N  GE  +Y+      +AP     P+ + A + +  T  C+A+G P P I W++N   
Sbjct: 433 ATNEAGEKSAYTWLRVKTSAPIMEQPPQNVTALDGKDATISCRAAGAPNPNITWIYNETQ 492

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           + +      + +    + I ++R +D G Y C   N  G V  + Y++VL    +I + P
Sbjct: 493 LVELSSR-VQILESGDLLISSIRAADAGLYICVRANEAGSVKGEAYLSVLVRT-QIIQPP 550

Query: 226 KDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKE---LTGGRYTILETGDLKITDVAFA 280
            D   + G T  L C+V   P     ++W    +    +   R  +   G L+I  V  +
Sbjct: 551 VDTTVLLGLTATLQCKVSSDPSVPYNIDWYREGQSTPIVNSQRVGVQADGQLEIQAVRAS 610

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKE------HTHITDQPEDYEVEAGQSAT--FRCNA- 331
           D G Y C   +  G    S  L+V E      +  +   PE ++     S T  F  N+ 
Sbjct: 611 DVGSYACVVTSPGGNETRSAMLSVIELPFPPSNVRVERLPEPHQRSINVSWTPGFDGNSP 670

Query: 332 --------------------VSDPSLKLSIVWLRGSEPIDFESEPRFVQSND------YS 365
                               V DP L     W+  +E  +  ++ R++  ++      Y 
Sbjct: 671 IAKFIIQRREVSELEKFVGPVPDPLLN----WI--TELTNVSADQRWIVLDNLKAATVYQ 724

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAK---KAVVS 422
             V+  + +  G              ++ +  V++P EAPS   +  V  A+   + +  
Sbjct: 725 FRVSAVNRVGEGS------------PSEPSNIVELPQEAPSGPPVGFVGSARSMSEIITQ 772

Query: 423 WNPVSPQSLRGHFRGYKVQ---------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPA 473
           W P   +   G   GY ++          W+ ++        I N+ +     + + +  
Sbjct: 773 WQPPLEEHRNGQILGYILRYRLYGYNNVPWSYQN--------ITNEAQRNFL-IQELITW 823

Query: 474 SKNFARVLAFNGAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWV--KPEQP 530
                ++ A+N    G  +E     T EGVP     +L  + L S+A  + W    P+Q 
Sbjct: 824 KDYIVQIAAYNNMGVGVYTEGAKIKTKEGVPEAPPTNLRVLALNSTAVQISWTPPNPQQI 883

Query: 531 NGVLMGYKIK--YQSVKGTKVGPLLERL----PYISDPTT-TSAKLAGLEPSTKYRIHLA 583
           NG+  GYKI+   Q +   +   L +R+    P + DP    +A L GL+   KY I + 
Sbjct: 884 NGINQGYKIQAWQQHLIEGEYQDLEKRMITVPPSLIDPLAEQTATLNGLDKYAKYNITVL 943

Query: 584 GYTKAGDGAESK 595
            +T  GDG  S+
Sbjct: 944 CFTDPGDGVISQ 955



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 137/620 (22%), Positives = 239/620 (38%), Gaps = 108/620 (17%)

Query: 45   ALRNKKVELFCIFGGTPLPQTIWSKDGVP-INPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
            AL  K   + C   G P P   W  +    +  S R+     G  L+I  +  +D G Y 
Sbjct: 464  ALDGKDATISCRAAGAPNPNITWIYNETQLVELSSRVQILESG-DLLISSIRAADAGLYI 522

Query: 104  CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEP--EIHWVH 161
            C  +N  G  K  +  LSVL        P         T T +CK S  P     I W  
Sbjct: 523  CVRANEAGSVKGEAY-LSVLVRTQIIQPPVDTTVLLGLTATLQCKVSSDPSVPYNIDWYR 581

Query: 162  NGKPISQAPPNPRRKVG---PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA-- 216
             G+     P    ++VG     ++ I+ +R SD G+Y C  T+  G   +   ++V+   
Sbjct: 582  EGQ---STPIVNSQRVGVQADGQLEIQAVRASDVGSYACVVTSPGGNETRSAMLSVIELP 638

Query: 217  --------------HAPEIT---------EAPKDEYTVDGKTVVLTCRVFG-APKPEVNW 252
                          H   I           +P  ++ +  + V    +  G  P P +NW
Sbjct: 639  FPPSNVRVERLPEPHQRSINVSWTPGFDGNSPIAKFIIQRREVSELEKFVGPVPDPLLNW 698

Query: 253  IHNQKELTGG-RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT 311
            I     ++   R+ +L+  +LK   V      ++   A N++G  +GS S    E ++I 
Sbjct: 699  ITELTNVSADQRWIVLD--NLKAATVY-----QFRVSAVNRVG--EGSPS----EPSNIV 745

Query: 312  DQPEDYEVEAGQSATFRCNAVS--------DPSLKLS--------IVWLR----GSEPID 351
            + P+  E  +G    F  +A S         P L+          I+  R     + P  
Sbjct: 746  ELPQ--EAPSGPPVGFVGSARSMSEIITQWQPPLEEHRNGQILGYILRYRLYGYNNVPWS 803

Query: 352  FESEPRFVQSN----------DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            +++     Q N          DY + +   + +  G YT  A+ +             VP
Sbjct: 804  YQNITNEAQRNFLIQELITWKDYIVQIAAYNNMGVGVYTEGAKIKTK---------EGVP 854

Query: 402  LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIREL------ 455
               P+N  ++  +++    +SW P +PQ + G  +GYK+Q W +   EG  ++L      
Sbjct: 855  EAPPTNLRVL-ALNSTAVQISWTPPNPQQINGINQGYKIQAWQQHLIEGEYQDLEKRMIT 913

Query: 456  ----IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLE 511
                +++     T  ++     +K    VL F    +G  S+ +S +T E VP  + +L 
Sbjct: 914  VPPSLIDPLAEQTATLNGLDKYAKYNITVLCFTDPGDGVISQKVSVMTKEDVPDEITALH 973

Query: 512  AIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAG 571
               +   +  + W  P   NGVL GY ++YQ     +    ++ +   ++ T  +     
Sbjct: 974  FDDISDRSVTVLWAPPRHANGVLTGYTVRYQMRDRPET---MKSINLTAEDTQLTVN--Q 1028

Query: 572  LEPSTKYRIHLAGYTKAGDG 591
            L+ +T Y   +  +T+ G G
Sbjct: 1029 LQATTHYWFEICAWTRIGRG 1048



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 96/395 (24%), Positives = 157/395 (39%), Gaps = 45/395 (11%)

Query: 57  FGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSY 116
           + G+P P   W KDG+P+  +D  S   Y     I + +  D GSY C   N  G   S 
Sbjct: 95  YAGSPQPTYRWLKDGIPV--ADYSSSQFYR----IHNTKREDAGSYQCIARNEAGSIFSE 148

Query: 117 SIDLSVLAAPYFTVEPE-FINAAEEETVTFECKA-SGLPEPEIHWVHNGKPISQAPPNPR 174
             ++ V     F  + E ++         F+  A   +P+P + W    + ++       
Sbjct: 149 KSEVVVSYMGTFENKNEGYLTVVSGHPAIFDMPAIDSVPKPSVSWQAENRTLNYDIKYAL 208

Query: 175 RKVGPNRITIENLRKSDTGNYGCNATNS-LGY--VYKDVYVNVLAH-----APEITEAPK 226
            +   N++ + +  + D   Y  +A N+ LG       +++NV        APEI   P+
Sbjct: 209 TQA--NQLIVLSADEQDRHAYRAHAMNTQLGREEASAPIHLNVTGDPFVEVAPEIIVPPQ 266

Query: 227 DEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD------LKITDVAF 279
           D     G+ V  L C     P  E+  I  +  L      IL T +      L +     
Sbjct: 267 DLKLKRGEGVAELQCIANARPLHELETIWLKDGLPVENAGILHTLNNPWNRTLALLQANS 326

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEV-------EAGQSATFRCNAV 332
           + +GEYTC  R + G   G  ++T   H +I + P  +         + G      C+ V
Sbjct: 327 SHAGEYTCQVRLRSG---GFRTVTASAHVYILEPPMFFTPMRAETFGDFGGQVMLPCDVV 383

Query: 333 SDPSLKLSIVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
            DP+ ++   W R +E ID +     +    D +L + K +  D G + C A  E     
Sbjct: 384 GDPTPQVQ--WFRNAERIDAQLLSGGYSVKADNTLIIKKLTLEDEGMFQCLATNEAGEKS 441

Query: 392 AQATLTVQ--VPL--EAPSNFTLIQVIDAKKAVVS 422
           A   L V+   P+  + P N T    +D K A +S
Sbjct: 442 AYTWLRVKTSAPIMEQPPQNVT---ALDGKDATIS 473



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 72/154 (46%), Gaps = 12/154 (7%)

Query: 480  VLAFNGAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMG 536
            VL FN    GP +   +    E VP G  ++++A  + S+   L+W  P+Q   NG ++G
Sbjct: 1652 VLPFNSQGPGPATPPAAVYVGEAVPTGEPRAVDAAAISSTEVRLRWKPPKQSMQNGDILG 1711

Query: 537  YKIKY---QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
            YKI Y    S +  + G   E    +   T TS  L  L+  T+YRI L  +  AGDG  
Sbjct: 1712 YKIFYLVTYSPQALEPGRKWEEEIEVVSATATSHSLVFLDKYTEYRIQLLAFNPAGDGPR 1771

Query: 594  S-----KYLFYVPFKNPDNVEGRGSTPNNLVISW 622
            S     K L  VP   P N+     T  +L +SW
Sbjct: 1772 SAPVTVKTLQGVP-SAPLNLRFSDITMQSLEVSW 1804



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 83/205 (40%), Gaps = 22/205 (10%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            PLE  +N T      +   VV W  V  Q   G   GYKV           + + I N  
Sbjct: 1273 PLEVEANAT-----SSTTVVVRWGEVPRQHRNGQIEGYKVFYAATDRVVPVLHKTIPNNS 1327

Query: 461  ESTTT--EVDKFVPASKNFARVLAF----NGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
              TTT  E+ K+V       +VLA+    +GA + PP  + +F   E  PG   ++    
Sbjct: 1328 SFTTTLTELKKYV---VYHVQVLAYTRLGDGALSTPPIRVQTF---EDTPGAPSNVSFPD 1381

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
            +  S   + W  P+ PNG ++ Y++ Y ++ G+         P    P+  + +   L P
Sbjct: 1382 VTFSMARIIWDVPDDPNGEILAYQVTY-TLNGSANLNYSREFP----PSDRTFRATQLLP 1436

Query: 575  STKYRIHLAGYTKAGDGAESKYLFY 599
               Y   +   T+ G G  +  L Y
Sbjct: 1437 ERYYTFSVTAQTRLGWGKTASVLVY 1461



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 84/201 (41%), Gaps = 22/201 (10%)

Query: 457  VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-IISFVTPEGVPG------TVQS 509
            ++  ++ T  V   +P ++   R+ A N   +  PSE    F T +  P       TV++
Sbjct: 1115 ISDPDAETLTVTGLMPFTQYRLRLSATNVVGSSRPSEPTKDFQTIQARPMHAPYNVTVRA 1174

Query: 510  LEAIPLGSSAFYLKWVKPEQPN--GVLMGYKIKYQSVKGTKVGPLLE--RLPYISDPTTT 565
            + A         ++W+  +Q    G   GY I Y+ V+  K G +    R   I D T  
Sbjct: 1175 MSA-----QQLRVRWIPLQQTEWFGNPRGYNITYRQVEH-KAGTIRHPPRSTLIEDHTAN 1228

Query: 566  SAKLAGLEPSTKYRIHL-----AGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVI 620
            S  L GLE  T Y + +      G ++A + AE +     P   P  VE   ++   +V+
Sbjct: 1229 SHVLDGLEEWTLYEVLINACNDVGCSRASNAAEERTREATPSYGPLEVEANATSSTTVVV 1288

Query: 621  SWTAMPEIEHNAPHFKYRIFW 641
             W  +P    N     Y++F+
Sbjct: 1289 RWGEVPRQHRNGQIEGYKVFY 1309



 Score = 39.7 bits (91), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 63/138 (45%), Gaps = 6/138 (4%)

Query: 414  IDAKKAVVSWNPVSPQSLRGHFRGYKV---QTWTEKDGEGSIR---ELIVNKGESTTTEV 467
            I + +  + W P       G   GYK+    T++ +  E   +   E+ V    +T+  +
Sbjct: 1688 ISSTEVRLRWKPPKQSMQNGDILGYKIFYLVTYSPQALEPGRKWEEEIEVVSATATSHSL 1747

Query: 468  DKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKP 527
                  ++   ++LAFN A +GP S  ++  T +GVP    +L    +   +  + W  P
Sbjct: 1748 VFLDKYTEYRIQLLAFNPAGDGPRSAPVTVKTLQGVPSAPLNLRFSDITMQSLEVSWDPP 1807

Query: 528  EQPNGVLMGYKIKYQSVK 545
            +  NG ++GY + Y++ +
Sbjct: 1808 KFLNGEILGYLVTYETTE 1825


>gi|426249261|ref|XP_004018368.1| PREDICTED: contactin-6 isoform 1 [Ovis aries]
          Length = 1028

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 183/716 (25%), Positives = 309/716 (43%), Gaps = 78/716 (10%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    + S+     +L I + +  D+G Y 
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQ--ATLEIPNFQQEDEGFYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C  SN  G   +    L   A P +  + +    +  +++ +ECKASG P+P   W+ NG
Sbjct: 297 CIASNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDSLFWECKASGKPDPWYTWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++   P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 356 ERLN---PEERIQIENGTLIITMLNVSDSGIYQCAAENKYQIIYANAELRVLASAPDFSK 412

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
            P  +Y+V   G  +V+ C+    P+  ++W    + L    R  +LE G LKI +V  +
Sbjct: 413 NPLKKYSVVQVGGDIVIECKPNAFPRATISWKRGIESLRQSKRVFLLEDGSLKIYNVTRS 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A+ +GSL +KE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 473 DAGVYTCIATNQFGVAKNTGSLIIKERTVITVPPSKMDVTVGESIVLPCQVSHDPSIEVV 532

Query: 341 IVWLRGSEPIDFE---SEPRFVQSNDYSLTVTKSSELD-SGQYTCRAQTELDFIEAQATL 396
            VW    + IDF+   +    +  +     + ++ +L+ SG+Y C  +T L+ + A   +
Sbjct: 533 FVWSFNGDVIDFKKGVAHFERIGGDSVGDLMIRNIQLNHSGKYLCTVKTTLESLSADGDI 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-----WTEKDGEGS 451
            V+ P   P +  +   I +    +SW P S  +        + +T     W       +
Sbjct: 593 IVRGPPGPPEDVRVTH-ISSASCQLSWRPGSDNNSPIQIFSIQARTPFSVGW---QAVST 648

Query: 452 IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSL 510
           + E++   G++    V    P  +   RV+A N    G PS+    + T   VP    + 
Sbjct: 649 VPEIL--NGKTFNATVVALNPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPTN 706

Query: 511 EAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSA 567
                GS S   + W  +  E  NG   GY +  + V  T      ER+P + + +    
Sbjct: 707 INGGGGSRSELIITWESIPEELQNGEDFGYIVMLRPVGSTTWTK--ERVPSV-ESSRFIY 763

Query: 568 KLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS-----TPNNLVISW 622
           +   + P + + + +  Y K G+G  S        ++   +  RG+     + + + +SW
Sbjct: 764 RNENIIPLSPFEVKVGVYNKEGEGPLSTASIIYSGEDEPQLAPRGTSVQSFSASEMEVSW 823

Query: 623 TAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTW 682
            A+                       AWN       R +  VL        YE   V  W
Sbjct: 824 NAI-----------------------AWN-------RNTGRVLG-------YE---VLYW 843

Query: 683 TEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           T+   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S  ++  T
Sbjct: 844 TDDSKESMIGKIRVS-GNITTKNITGLKANTVYFASVRAYNTAGTGPSSPPVNVTT 898



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 153/643 (23%), Positives = 247/643 (38%), Gaps = 72/643 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC ++N   + +       ++           P   V  PE I A
Sbjct: 180 NLYIAKVEPSDVGNYTCLITNKEAQRRVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQA 239

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A++ +V  EC A G P P+I W   +G P+   P   +       + I N ++ D G Y 
Sbjct: 240 AKDSSVKLECFALGNPVPDISWRRLDGSPL---PGKVKYSKSQATLEIPNFQQEDEGFYE 296

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A+N  G       + +    PE  +  ++ Y     ++   C+  G P P   W+ N 
Sbjct: 297 CIASNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDSLFWECKASGKPDPWYTWLKNG 355

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQP- 314
           + L       +E G L IT +  +DSG Y C A NK      +  L V       +  P 
Sbjct: 356 ERLNPEERIQIENGTLIITMLNVSDSGIYQCAAENKYQIIYANAELRVLASAPDFSKNPL 415

Query: 315 EDYE-VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           + Y  V+ G      C   + P  + +I W RG E        R     D SL +   + 
Sbjct: 416 KKYSVVQVGGDIVIECKPNAFP--RATISWKRGIE--SLRQSKRVFLLEDGSLKIYNVTR 471

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV-----------VS 422
            D+G YTC A  +    +   +L ++         T+I V  +K  V           VS
Sbjct: 472 SDAGVYTCIATNQFGVAKNTGSLIIK-------ERTVITVPPSKMDVTVGESIVLPCQVS 524

Query: 423 WNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 477
            +P         F G  +         E+ G  S+ +L++   +       K++   K  
Sbjct: 525 HDPSIEVVFVWSFNGDVIDFKKGVAHFERIGGDSVGDLMIRNIQ--LNHSGKYLCTVKTT 582

Query: 478 ARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
              L+ +G            +   G PG  + +    + S++  L W      N  +  +
Sbjct: 583 LESLSADGD-----------IIVRGPPGPPEDVRVTHISSASCQLSWRPGSDNNSPIQIF 631

Query: 538 KIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK- 595
            I  Q+     VG   +  +P I +  T +A +  L P  +Y   +      G G  SK 
Sbjct: 632 SI--QARTPFSVGWQAVSTVPEILNGKTFNATVVALNPWVEYEFRVVAGNSIGIGEPSKP 689

Query: 596 -----YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
                    VP   P N+ G G + + L+I+W ++PE   N   F Y +  R   +   W
Sbjct: 690 SELLRTKASVPAVAPTNINGGGGSRSELIITWESIPEELQNGEDFGYIVMLRPVGS-TTW 748

Query: 651 NQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSI 691
            ++ V     S  +  N+      P+E+KV      K+GEG +
Sbjct: 749 TKERVPSVESSRFIYRNENIIPLSPFEVKV--GVYNKEGEGPL 789



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 147/638 (23%), Positives = 246/638 (38%), Gaps = 79/638 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +NP +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 339 CKASGKPDPWYTWLKNGERLNPEERIQIEN--GTLIITMLNVSDSGIYQCAAENKY-QII 395

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
             + +L VLA AP F+  P  ++        +  ECK +  P   I W    + + Q+  
Sbjct: 396 YANAELRVLASAPDFSKNPLKKYSVVQVGGDIVIECKPNAFPRATISWKRGIESLRQSKR 455

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
               + G   + I N+ +SD G Y C ATN  G V K+    ++     IT  P      
Sbjct: 456 VFLLEDG--SLKIYNVTRSDAGVYTCIATNQFG-VAKNTGSLIIKERTVITVPPSKMDVT 512

Query: 232 DGKTVVLTCRVFGAPKPEVNWIHN-------------QKELTGGRYTILETGDLKITDVA 278
            G+++VL C+V   P  EV ++ +               E  GG       GDL I ++ 
Sbjct: 513 VGESIVLPCQVSHDPSIEVVFVWSFNGDVIDFKKGVAHFERIGGD----SVGDLMIRNIQ 568

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSDPS 336
              SG+Y C  +  L +    G + V+        PED  V    SA+ + +    SD +
Sbjct: 569 LNHSGKYLCTVKTTLESLSADGDIIVRGPP---GPPEDVRVTHISSASCQLSWRPGSDNN 625

Query: 337 LKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
             + I  ++   P         + P  +    ++ TV   +     ++   A   +   E
Sbjct: 626 SPIQIFSIQARTPFSVGWQAVSTVPEILNGKTFNATVVALNPWVEYEFRVVAGNSIGIGE 685

Query: 392 AQA-----TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ----- 441
                        VP  AP+N          + +++W  +  +   G   GY V      
Sbjct: 686 PSKPSELLRTKASVPAVAPTNINGGGG-SRSELIITWESIPEELQNGEDFGYIVMLRPVG 744

Query: 442 --TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
             TWT++          + + E+        +P S    +V  +N    GP S      +
Sbjct: 745 STTWTKERVPSVESSRFIYRNEN-------IIPLSPFEVKVGVYNKEGEGPLSTASIIYS 797

Query: 500 PEGVP------GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKVGP 551
            E  P       +VQS  A  +  S   + W    +  G ++GY++ Y     K + +G 
Sbjct: 798 GEDEPQLAPRGTSVQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDSKESMIGK 854

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPD 606
           +      +S   TT   + GL+ +T Y   +  Y  AG G  S  +        P + P 
Sbjct: 855 I-----RVSGNITTK-NITGLKANTVYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPA 908

Query: 607 NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           N+  +  T + L ++W  +  +E+ +    Y+I +R++
Sbjct: 909 NIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQN 945



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 115/495 (23%), Positives = 181/495 (36%), Gaps = 72/495 (14%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS-DQGSYTC 104
           L   ++ L C   G PLP   W ++G  I+ +        G SL I       D G+Y C
Sbjct: 41  LSKSEIILNCAANGYPLPHYRWKQNGADIDFTMSYHYRLDGGSLAISSPRTDQDIGTYQC 100

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPEI-----H 158
             +N +G   S    L       F T     ++  E + V   C     P P        
Sbjct: 101 LATNSLGTILSQKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCG----PPPHFGDLSYA 156

Query: 159 WVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------- 205
           W+ N  P+     N RR V      + I  +  SD GNY C  TN               
Sbjct: 157 WIFNDNPLYVQEDN-RRFVSQETGNLYIAKVEPSDVGNYTCLITNKEAQRRVQGPPTPLV 215

Query: 206 -----VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKEL 259
                V  +    +    PE  +A KD       +V L C   G P P+++W   +   L
Sbjct: 216 QRTDGVMGEYEPKIEVRFPETIQAAKD------SSVKLECFALGNPVPDISWRRLDGSPL 269

Query: 260 TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEV 319
            G          L+I +    D G Y C A N  G     G L          + ++  +
Sbjct: 270 PGKVKYSKSQATLEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPPEWEQKIQNTYL 329

Query: 320 EAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQY 379
               S  + C A   P    +  WL+  E ++ E     +Q  + +L +T  +  DSG Y
Sbjct: 330 SIYDSLFWECKASGKPDPWYT--WLKNGERLNPEER---IQIENGTLIITMLNVSDSGIY 384

Query: 380 TCRAQTELDFIEAQATLTVQVPLEAPS-------NFTLIQ-----VIDAK-----KAVVS 422
            C A+ +   I A A L V     AP         ++++Q     VI+ K     +A +S
Sbjct: 385 QCAAENKYQIIYANAELRVLA--SAPDFSKNPLKKYSVVQVGGDIVIECKPNAFPRATIS 442

Query: 423 WNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGES---TTTEVDKFVPASKNFAR 479
           W     +SLR   R + ++       +GS++   V + ++   T    ++F  A    + 
Sbjct: 443 WKR-GIESLRQSKRVFLLE-------DGSLKIYNVTRSDAGVYTCIATNQFGVAKNTGSL 494

Query: 480 VLAFNGAYNGPPSEI 494
           ++        PPS++
Sbjct: 495 IIKERTVITVPPSKM 509



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 106/285 (37%), Gaps = 32/285 (11%)

Query: 123 LAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGP 179
           L+ P FT EP+   F     +  +   C A+G P P   W  NG  I        R  G 
Sbjct: 23  LSPPIFTQEPQDAIFPLDLSKSEIILNCAANGYPLPHYRWKQNGADIDFTMSYHYRLDGG 82

Query: 180 NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVL 238
           +          D G Y C ATNSLG +         A+  +     +   +V +G+ VVL
Sbjct: 83  SLAISSPRTDQDIGTYQCLATNSLGTILSQKAKLQFAYIEDFETKTRSTVSVREGQGVVL 142

Query: 239 TCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCFA 289
            C     P P        WI N   L       R+   ETG+L I  V  +D G YTC  
Sbjct: 143 LC----GPPPHFGDLSYAWIFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCLI 198

Query: 290 RNKLGT--AQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSLK 338
            NK      QG  +  V+    +  +         PE  +     S    C A+ +P   
Sbjct: 199 TNKEAQRRVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPD 258

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +S   L GS       + ++ +S   +L +    + D G Y C A
Sbjct: 259 ISWRRLDGSP---LPGKVKYSKSQA-TLEIPNFQQEDEGFYECIA 299



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 14/190 (7%)

Query: 409 TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
           T +Q   A +  VSWN ++     G   GY+V  WT+   E  I ++ V+ G  TT  + 
Sbjct: 809 TSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVS-GNITTKNIT 867

Query: 469 KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VK 526
                +  FA V A+N A  GP S  ++  T +  P    +  A  L +S   L W  VK
Sbjct: 868 GLKANTVYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLTNSKLCLNWEHVK 927

Query: 527 PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGY 585
             +    ++GYKI Y+  + +K         +I +   TSA+L  L P    Y I +   
Sbjct: 928 TMENESEVLGYKILYRQNRHSKT--------HILETNNTSAEL--LVPFEEDYLIEIRTV 977

Query: 586 TKAGDGAESK 595
           +  GDG+ S+
Sbjct: 978 SDGGDGSSSE 987


>gi|348575437|ref|XP_003473495.1| PREDICTED: LOW QUALITY PROTEIN: contactin-4-like [Cavia porcellus]
          Length = 1026

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 174/637 (27%), Positives = 267/637 (41%), Gaps = 71/637 (11%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P   W + DG PI    R  + N    L I + +  D G Y C   N 
Sbjct: 243 VKLECFALGNPVPTIAWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGLYECVAENS 300

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P +  +   I+ A EE V +ECKA+G P+P   W+ NG+P+   
Sbjct: 301 RGKNVARG-QLTFYAQPNWIQKINDIHVAMEEKVFWECKANGKPKPTYRWLKNGEPLLT- 358

Query: 170 PPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
               R ++    G   ITI NL  SD G Y C A N  G ++    ++V+   P+ +   
Sbjct: 359 ----RDRIQIEQGTLNITIVNL--SDAGMYQCVAENKHGVIFSSAELSVIGECPDFSRTX 412

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADS 282
               T+   G  VV+ C+   +PKP   W   +  L    R TI E G+L+I +V  +D+
Sbjct: 413 LKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDA 472

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   
Sbjct: 473 GSYTCIATNHFGTASSTGNLVVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFT 532

Query: 343 WLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           W      IDF  +         Q +   L +       +G+Y C  QT +D + A A L 
Sbjct: 533 WSFNEHLIDFNKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLI 592

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGE 449
           V+ P   P   T+ ++ D   A +SW P     SP ++      Y +Q  T         
Sbjct: 593 VRGPPGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFSVGWQAV 645

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTP 500
            ++ ELI   G++ T  V    P  +   R +A N    G PS         E +  VTP
Sbjct: 646 NTVPELI--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTP 703

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
             V G   S        S   + W  V  E  NG   GY + ++       G ++  L  
Sbjct: 704 ANVSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFRP-----YGKMIWMLTV 751

Query: 559 I--SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGR 611
           +  +D +    +   + P + + + +  +   G+G  S           P K P ++  R
Sbjct: 752 LASADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFAR 811

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
             +  ++ + W A P  ++      Y + + RHN  E
Sbjct: 812 SLSATDIEVFW-ASPLGKNRGRIQGYEVKYWRHNDKE 847



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 164/644 (25%), Positives = 241/644 (37%), Gaps = 97/644 (15%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V  PE +  
Sbjct: 178 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVHFPETVPT 237

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   +GKPI++     RR      + I N ++ D G Y 
Sbjct: 238 AKGATVKLECFALGNPVPTIAWRRADGKPIAR---KARRHKSNGILEIPNFQQEDAGLYE 294

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P   +   D +    + V   C+  G PKP   W+ N 
Sbjct: 295 CVAENSRGKNVARGQLTFYAQ-PNWIQKINDIHVAMEEKVFWECKANGKPKPTYRWLKNG 353

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           + L       +E G L IT V  +D+G Y C A NK G    S  L+V     I + P+ 
Sbjct: 354 EPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSV-----IGECPDF 408

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  K    W +G + I  E+E R   S D +L +
Sbjct: 409 SRTXLKRVTLVKVGGEVVIECKPKASP--KPVYTWKKGRD-ILKENE-RITISEDGNLRI 464

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
              ++ D+G YTC A        +   L V+ P +     + + V   +  V+       
Sbjct: 465 INVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTKVMVPPSSMDVTVGESIVLPCQVTHD 524

Query: 429 QSLRGHFRGYKVQTWT--------EKD--------GEGSIRELIVNKGE---------ST 463
            SL   F      TW+         KD        G+ S  +L++   +           
Sbjct: 525 HSLDIVF------TWSFNEHLIDFNKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMV 578

Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYL 522
            T VD+   A+    R         GPP    +    E    T Q S    P   S   +
Sbjct: 579 QTSVDRLSAAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITM 629

Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
             ++   P      + + +Q+V           +P + D  T +A + GL P  +Y    
Sbjct: 630 YVIQARTP------FSVGWQAVN---------TVPELIDGKTFTATVVGLNPWVEYEFRT 674

Query: 583 AGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
                 G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F 
Sbjct: 675 VAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFG 734

Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
           Y + +R +     W    +     S  V  N+    F P+E+KV
Sbjct: 735 YVVAFRPYGK-MIWMLTVLASADASRYVFRNESVRPFSPFEVKV 777



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 142/370 (38%), Gaps = 30/370 (8%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEV 106
           +KKV+L C   G P P   W  +G  ++            SL+I +  +  D G+Y C  
Sbjct: 43  DKKVKLNCEVKGNPKPHIRWKLNGTDVDIGMDFRYSLVEGSLLINNPNKTQDTGTYQCIA 102

Query: 107 SNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVH 161
           SN  G   S    L       F T     ++    + +   C   G P    E    W+ 
Sbjct: 103 SNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLC---GPPPHSGELSYAWIF 159

Query: 162 NGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN 213
           N  P  Q   + RR V      + I  + KSD GNY C  TN+      LG     +  N
Sbjct: 160 NEYPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRN 216

Query: 214 ---VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILE 268
              +  + P+I    P+   T  G TV L C   G P P + W   + K +         
Sbjct: 217 DGVMGEYEPKIEVHFPETVPTAKGATVKLECFALGNPVPTIAWRRADGKPIARKARRHKS 276

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
            G L+I +    D+G Y C A N  G     G LT     +   +  D  V   +   + 
Sbjct: 277 NGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAMEEKVFWE 336

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           C A   P  K +  WL+  EP+        +Q    +L +T  +  D+G Y C A+ +  
Sbjct: 337 CKANGKP--KPTYRWLKNGEPLLTRDR---IQIEQGTLNITIVNLSDAGMYQCVAENKHG 391

Query: 389 FIEAQATLTV 398
            I + A L+V
Sbjct: 392 VIFSSAELSV 401



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 146/641 (22%), Positives = 243/641 (37%), Gaps = 77/641 (12%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS--QGNYGKSLIIKHVEFSDQGSYTCEV 106
           +KV   C   G P P   W K+G P+   DRI   QG    +L I  V  SD G Y C  
Sbjct: 331 EKVFWECKANGKPKPTYRWLKNGEPLLTRDRIQIEQG----TLNITIVNLSDAGMYQCVA 386

Query: 107 SNGVGEAKSYSIDLSVLA-APYFTV----EPEFINAAEEETVTFECKASGLPEPEIHWVH 161
            N  G   S S +LSV+   P F+         +    E  V  ECK    P+P   W  
Sbjct: 387 ENKHGVIFS-SAELSVIGECPDFSRTXLKRVTLVKVGGE--VVIECKPKASPKPVYTW-K 442

Query: 162 NGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
            G+ I +   N R  +  +  + I N+ KSD G+Y C ATN  G        N++   P 
Sbjct: 443 KGRDILKE--NERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASST--GNLVVKDPT 498

Query: 221 ITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV--NWIHNQK-----------ELTGGRYTI 266
               P     V  G+++VL C+V      ++   W  N+            E  GG+ + 
Sbjct: 499 KVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNEHLIDFNKDGDHFERVGGQDS- 557

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
              GDL I ++    +G+Y C  +  +     +  L V+        PE   ++     T
Sbjct: 558 --AGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGP---PGPPEAVTIDEITDTT 612

Query: 327 FRCNAVSDPS----LKLSIVWLRGSEPIDFE---SEPRFVQSNDYSLTVTKSSELDSGQY 379
            + +    P     + + ++  R    + ++   + P  +    ++ TV   +     ++
Sbjct: 613 AQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTVPELIDGKTFTATVVGLNPWVEYEF 672

Query: 380 TCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDA----KKAVVSWN--PVSPQSLRG 433
              A   +   E       +   EA    T   V        + V++W   P   Q+ RG
Sbjct: 673 RTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRG 732

Query: 434 H-----FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
                 FR Y    W       +     V + ES    V  F P      +V  FN    
Sbjct: 733 FGYVVAFRPYGKMIWMLTVLASADASRYVFRNES----VRPFSPFE---VKVGVFNNKGE 785

Query: 489 GPPSEIISFVTPEGVPGT-VQSLEAIPLGSSAFYLKWVKPEQPN-GVLMGYKIKYQSVKG 546
           GP S      + E  P     S+ A  L ++   + W  P   N G + GY++KY     
Sbjct: 786 GPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPLGKNRGRIQGYEVKYWRHND 845

Query: 547 TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----P 601
            +      ++  + + T+T  K+  L+ S  Y + +  Y  AG G  S  +        P
Sbjct: 846 KEEN--ARKIRTVGNQTST--KITNLQGSALYHLAVKAYNSAGTGPSSATVNVTTRKPPP 901

Query: 602 FKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
            + P N+    S+ + ++++W  +  +++ +    Y++ +R
Sbjct: 902 SQPPGNIIW-NSSDSKIILNWDQVKALDNESEVKGYKVLYR 941



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 118/303 (38%), Gaps = 34/303 (11%)

Query: 119 DLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D   L  P F  EP    F   +E++ V   C+  G P+P I W  NG  +     + R 
Sbjct: 19  DDYTLHGPIFIQEPNHVMFPLDSEDKKVKLNCEVKGNPKPHIRWKLNGTDVDIG-MDFRY 77

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            +    + I N  K+ DTG Y C A+NS G +         A+        +   +V  G
Sbjct: 78  SLVEGSLLINNPNKTQDTGTYQCIASNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRG 137

Query: 234 KTVVLTCRVFGAPKPEVN-----WIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYT 286
           + +VL C     P P        WI N+        R+   ETG+L I  V  +D G YT
Sbjct: 138 QGMVLLC----GPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYT 193

Query: 287 CFARNKLGTAQGSGSLT--VKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDP 335
           C   N +   +  G  T  +  +  +  +         PE      G +    C A+ +P
Sbjct: 194 CVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVHFPETVPTAKGATVKLECFALGNP 253

Query: 336 SLKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
               +I W R   +PI    + R  +SN   L +    + D+G Y C A+       A+ 
Sbjct: 254 V--PTIAWRRADGKPI--ARKARRHKSNGI-LEIPNFQQEDAGLYECVAENSRGKNVARG 308

Query: 395 TLT 397
            LT
Sbjct: 309 QLT 311



 Score = 43.5 bits (101), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 21/192 (10%)

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            RG  +GY+V+ W   D E + R+ I   G  T+T++     ++     V A+N A  GP 
Sbjct: 830  RGRIQGYEVKYWRHNDKEENARK-IRTVGNQTSTKITNLQGSALYHLAVKAYNSAGTGPS 888

Query: 492  SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
            S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 889  SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNR 944

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
             +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P  + 
Sbjct: 945  QSSTS--------VIETNKTSVELS-LPVDEDYIIEIKPFSDGGDGSSSEQI-RIPKISN 994

Query: 606  DNVEGRGSTPNN 617
                G G++ +N
Sbjct: 995  SYARGSGASSSN 1006


>gi|317418924|emb|CBN80962.1| Contactin-4, partial [Dicentrarchus labrax]
          Length = 944

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 183/388 (47%), Gaps = 18/388 (4%)

Query: 47  RNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           +   V+L C   G P+P   W + D +P     ++        L I + +  D G+Y C 
Sbjct: 180 KGSTVKLECFALGNPVPSINWRRMDSIPF--PRKVDMRKASGVLEIPYFQQEDAGTYECV 237

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             N  G   +    LS  A P+   +P+ +    +E++ +ECKA+G P+P   W+ NG+ 
Sbjct: 238 AENSRG-MNTVKGKLSFYAPPHLIEKPQDVQKLIDESLVWECKATGKPKPSYRWMKNGEN 296

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +  A    R +V    ++I  L  SDTG Y C A N  G VY +  + V+A AP+ +   
Sbjct: 297 LESA--EERVQVANGALSISRLTLSDTGMYQCVAGNKHGEVYSNAELRVIAVAPDFSHNQ 354

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADS 282
               T+   G   ++ C+   +P   V+W    + L    R +IL+ G+L+I +    D+
Sbjct: 355 VRSQTLVKVGGDALIECKPKMSPWGVVSWRKGSEPLRESNRVSILDNGNLRIWNATKPDA 414

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC ARN+ G A  +GS+TVKE T IT  P   +V  G+S    C    DPSL+L   
Sbjct: 415 GLYTCVARNQFGVASSTGSITVKEPTIITTLPSTLDVTVGESVVLPCQVSHDPSLELKFT 474

Query: 343 WLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           W    + I F S   F      Q +   + +       +G+YTC  QT++D I     L 
Sbjct: 475 WFFNEQVIHFGSHGGFFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSISIAVDLV 534

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           V     AP++  + ++ D   A +SW P
Sbjct: 535 VP---GAPTSIHVEEITDT-TASLSWRP 558



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 146/334 (43%), Gaps = 33/334 (9%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V + +       ++           P   V+ PE ++ 
Sbjct: 119 NLYIAMVEPSDVGNYTCVVTNTVTKTRVQGPPTPLVLRSDGVMGEYEPKIEVQFPEIVHV 178

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR---KVGPNRITIENLRKSDTGN 194
           A+  TV  EC A G P P I+W         + P PR+   +     + I   ++ D G 
Sbjct: 179 AKGSTVKLECFALGNPVPSINWRR-----MDSIPFPRKVDMRKASGVLEIPYFQQEDAGT 233

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           Y C A NS G       ++  A  P + E P+D   +  +++V  C+  G PKP   W+ 
Sbjct: 234 YECVAENSRGMNTVKGKLSFYA-PPHLIEKPQDVQKLIDESLVWECKATGKPKPSYRWMK 292

Query: 255 NQKELTGGRYTI-LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK------EH 307
           N + L      + +  G L I+ +  +D+G Y C A NK G    +  L V        H
Sbjct: 293 NGENLESAEERVQVANGALSISRLTLSDTGMYQCVAGNKHGEVYSNAELRVIAVAPDFSH 352

Query: 308 THITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
             +  Q     V+ G  A   C     P   +S  W +GSEP+      R    ++ +L 
Sbjct: 353 NQVRSQ---TLVKVGGDALIECKPKMSPWGVVS--WRKGSEPL--RESNRVSILDNGNLR 405

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +  +++ D+G YTC A+ +     +  ++TV+ P
Sbjct: 406 IWNATKPDAGLYTCVARNQFGVASSTGSITVKEP 439



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 130/588 (22%), Positives = 213/588 (36%), Gaps = 97/588 (16%)

Query: 67  WSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAP 126
           W K   P+  S+R+S  + G +L I +    D G YTC   N  G A S    ++V    
Sbjct: 383 WRKGSEPLRESNRVSILDNG-NLRIWNATKPDAGLYTCVARNQFGVASSTG-SITVKEPT 440

Query: 127 YFTVEPEFINAAEEETVTFECKASGLPEPEIH--WVHNGKPISQAPPNPR-RKVGPNR-- 181
             T  P  ++    E+V   C+ S  P  E+   W  N + I          KVG     
Sbjct: 441 IITTLPSTLDVTVGESVVLPCQVSHDPSLELKFTWFFNEQVIHFGSHGGFFEKVGGQHSA 500

Query: 182 --ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA-----HAPEITE----------- 223
             I I N++    G Y C     +  +   V + V       H  EIT+           
Sbjct: 501 GDIMIRNIQLRHAGKYTCAVQTKVDSISIAVDLVVPGAPTSIHVEEITDTTASLSWRPGP 560

Query: 224 ---APKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFA 280
              +P   YT+  +T            PEV        + G R T        + D++  
Sbjct: 561 DNHSPITAYTIQARTPFSLGWQAVTTVPEV--------VGGHRLT------ATVIDLSPW 606

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD---PSL 337
              E+   A N +GT + S             +P       G S       VS       
Sbjct: 607 VEYEFRVLASNTIGTGEPS-------------KPSKQARTKGTSPKVTPANVSGGGGSRS 653

Query: 338 KLSIVWLRGSEPIDFESEP-------------RFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           +L I W    E      EP              F+  N  ++T    + +  G+      
Sbjct: 654 ELVITW----EVSKLTQEPLTHGGGTEQLNVWHFIFKNREAIT----AAVTLGERKMLLS 705

Query: 385 TELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWT 444
                I+   TLT + P  AP+     + + A +  VSW  +   + +    GY+++ W+
Sbjct: 706 VTSKIIQTLYTLTPE-PGRAPTRVRA-KSLSASEIEVSWKALPWNASKKRVLGYELRYWS 763

Query: 445 --EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 502
             EK+   S++  +   G  T+T +     ++  +  V A+N A  GPPS  ++  T + 
Sbjct: 764 RSEKEDTASVQRTV---GNQTSTIIRGVKGSTTYYISVRAYNTAGTGPPSAAVNVTTKKP 820

Query: 503 VPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560
            P            +S   L W  VK  +    + GYK+ Y+  + ++        P + 
Sbjct: 821 PPSQPPVKVMWNTSNSKIILNWEQVKALENESEVTGYKVLYKKNRHSR--------PNVM 872

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNV 608
           +  TTS +LA L     Y I +  + + G+G+ S+ +       P+ V
Sbjct: 873 ETNTTSVELA-LPTDEDYIIQIKPFGEGGEGSSSRQITIPRIPGPNAV 919



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 102/268 (38%), Gaps = 37/268 (13%)

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAH 217
           W  NG  IS    +     G N + I +L K  D G Y C A+NS G +         A+
Sbjct: 1   WKLNGTEISPKSGSHYSLSGGN-LRISHLNKDQDAGTYQCLASNSFGTIVSREASLTFAY 59

Query: 218 APEITEAPKDEYTV-DGKTVVLTCRVFGAPKPE-----VNWIHNQ-----KELTGGRYTI 266
                   +   +V +G+ VVL C     P P       +WI N+     K+ T  R+  
Sbjct: 60  LENFKTHRRSSVSVREGQGVVLLC----GPPPHSGDLVFSWIFNEYPTFVKQDTR-RFIS 114

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGT--AQGSGSLTVKEHTHITDQ---------PE 315
            ETG+L I  V  +D G YTC   N +     QG  +  V     +  +         PE
Sbjct: 115 QETGNLYIAMVEPSDVGNYTCVVTNTVTKTRVQGPPTPLVLRSDGVMGEYEPKIEVQFPE 174

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS--LTVTKSSE 373
              V  G +    C A+ +P    SI W R    +D    PR V     S  L +    +
Sbjct: 175 IVHVAKGSTVKLECFALGNPV--PSINWRR----MDSIPFPRKVDMRKASGVLEIPYFQQ 228

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVP 401
            D+G Y C A+        +  L+   P
Sbjct: 229 EDAGTYECVAENSRGMNTVKGKLSFYAP 256


>gi|114585183|ref|XP_001138350.1| PREDICTED: contactin-4 isoform 4 [Pan troglodytes]
          Length = 1026

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 190/727 (26%), Positives = 294/727 (40%), Gaps = 112/727 (15%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P  IW + DG PI    R  + N    L I + +  D G Y C   N 
Sbjct: 243 VKLECFALGNPVPTIIWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGLYECVAENS 300

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P +  +   I+ A EE V +ECKA+G P+P   W+ NG+P+   
Sbjct: 301 RGKNVARG-QLTFYAQPNWIQKINDIHVAMEENVFWECKANGRPKPTYRWLKNGEPLLT- 358

Query: 170 PPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
               R ++    G   ITI NL  SD G Y C A N  G ++ +  ++V+A  P+ +   
Sbjct: 359 ----RDRIQIEQGTLNITIVNL--SDAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTL 412

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADS 282
               T+   G  V + C+   +PKP   W   +  +    R TI E G+L+I +V  +D+
Sbjct: 413 LKRVTLVKVGGEVAIECKPKASPKPVYTWKKGRDIVKENERITISEDGNLRIINVTKSDA 472

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   
Sbjct: 473 GSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFT 532

Query: 343 WLRGSEPIDFES-----EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           W      IDF+      E    Q +   L +       +G+Y C  QT +D + A A L 
Sbjct: 533 WSFNGHLIDFDRDGDPYERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLI 592

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGE 449
           V+ P   P   T+ ++ D   A +SW P     SP ++      Y +Q  T         
Sbjct: 593 VRGPPGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFSVGWQAV 645

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTP 500
            ++ ELI   G++ T  V    P  +   R +A N    G PS         E +  VTP
Sbjct: 646 STVPELI--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTP 703

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
             V G   S        S   + W  V  E  NG   GY + ++       G ++  L  
Sbjct: 704 ANVSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFRP-----YGKMIWMLTV 751

Query: 559 I--SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGR 611
           +  +D +    +   + P + + + +  +   G+G  S           P K P ++  R
Sbjct: 752 LASADASRYVFRNESVHPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFAR 811

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
             +  ++ + W +  E                                       N+   
Sbjct: 812 SLSATDIEVFWASPLE--------------------------------------KNRGRI 833

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
           Q YE+K    W  +D E + R+ I   G  T+T++     +      V A+N A  GP S
Sbjct: 834 QGYEVKY---WRHEDKEENARK-IRTVGNQTSTKITNLKGSVLYHLAVKAYNSAGTGPSS 889

Query: 732 EIISFVT 738
             ++  T
Sbjct: 890 ATVNVTT 896



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 160/638 (25%), Positives = 240/638 (37%), Gaps = 85/638 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V+ PE +  
Sbjct: 178 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPT 237

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   +GKPI++     RR      + I N ++ D G Y 
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIAR---KARRHKSNGILEIPNFQQEDAGLYE 294

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P   +   D +    + V   C+  G PKP   W+ N 
Sbjct: 295 CVAENSRGKNVARGQLTFYAQ-PNWIQKINDIHVAMEENVFWECKANGRPKPTYRWLKNG 353

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           + L       +E G L IT V  +D+G Y C A NK G    +  L+V     I   P+ 
Sbjct: 354 EPLLTRDRIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSV-----IAVGPDF 408

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  K    W +G + +  E+E R   S D +L +
Sbjct: 409 SRTLLKRVTLVKVGGEVAIECKPKASP--KPVYTWKKGRDIVK-ENE-RITISEDGNLRI 464

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV------- 421
              ++ D+G YTC A        +   L V+ P       + + V   +  V+       
Sbjct: 465 INVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHD 524

Query: 422 -SWNPVSPQSLRGHFRGYKV--QTWTEKDGEGSIRELIVNKGE---------STTTEVDK 469
            S + V   S  GH   +      +    G+ S  +L++   +            T VD+
Sbjct: 525 HSLDIVFTWSFNGHLIDFDRDGDPYERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDR 584

Query: 470 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPE 528
              A+    R         GPP    +    E    T Q S    P   S   +  ++  
Sbjct: 585 LSAAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQAR 635

Query: 529 QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
            P      + + +Q+V           +P + D  T +A + GL P  +Y          
Sbjct: 636 TP------FSVGWQAV---------STVPELIDGKTFTATVVGLNPWVEYEFRTVAANVI 680

Query: 589 GDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F Y + +R
Sbjct: 681 GIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFR 740

Query: 643 RHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
            +     W    +     S  V  N+    F P+E+KV
Sbjct: 741 PYGK-MIWMLTVLASADASRYVFRNESVHPFSPFEVKV 777



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 143/369 (38%), Gaps = 30/369 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  ++            SL+I +  +  D G+Y C  +
Sbjct: 44  KKVKLNCEVKGNPKPHIRWKLNGTDVDTGMDFRYSVVEGSLLINNPNKTQDAGTYQCTAT 103

Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVHN 162
           N  G   S    L       F T     ++    + +   C   G P    E    W+ N
Sbjct: 104 NSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMVLLC---GPPPHSGELSYAWIFN 160

Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN- 213
             P  Q   + RR V      + I  + KSD GNY C  TN+      LG     +  N 
Sbjct: 161 EYPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRND 217

Query: 214 --VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILET 269
             +  + P+I  + P+   T  G TV L C   G P P + W   + K +          
Sbjct: 218 GVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHKSN 277

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I +    D+G Y C A N  G     G LT     +   +  D  V   ++  + C
Sbjct: 278 GILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAMEENVFWEC 337

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   P  K +  WL+  EP+        +Q    +L +T  +  D+G Y C A+ +   
Sbjct: 338 KANGRP--KPTYRWLKNGEPLLTRDR---IQIEQGTLNITIVNLSDAGMYQCLAENKHGV 392

Query: 390 IEAQATLTV 398
           I + A L+V
Sbjct: 393 IFSNAELSV 401



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 118/303 (38%), Gaps = 34/303 (11%)

Query: 119 DLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D S L  P F  EP    F   +EE+ V   C+  G P+P I W  NG  +     + R 
Sbjct: 19  DDSTLHGPIFIQEPSPVMFPLDSEEKKVKLNCEVKGNPKPHIRWKLNGTDVDTG-MDFRY 77

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            V    + I N  K+ D G Y C ATNS G +         A+        +   +V  G
Sbjct: 78  SVVEGSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRG 137

Query: 234 KTVVLTCRVFGAPKPEVN-----WIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYT 286
           + +VL C     P P        WI N+        R+   ETG+L I  V  +D G YT
Sbjct: 138 QGMVLLC----GPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYT 193

Query: 287 CFARNK------LG-----TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           C   N       LG       +  G +   E       PE      G +    C A+ +P
Sbjct: 194 CVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNP 253

Query: 336 SLKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
               +I+W R   +PI  ++  R  +SN   L +    + D+G Y C A+       A+ 
Sbjct: 254 V--PTIIWRRADGKPIARKA--RRHKSNGI-LEIPNFQQEDAGLYECVAENSRGKNVARG 308

Query: 395 TLT 397
            LT
Sbjct: 309 QLT 311



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 21/192 (10%)

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            RG  +GY+V+ W  +D E + R+ I   G  T+T++     +      V A+N A  GP 
Sbjct: 830  RGRIQGYEVKYWRHEDKEENARK-IRTVGNQTSTKITNLKGSVLYHLAVKAYNSAGTGPS 888

Query: 492  SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
            S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 889  SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNR 944

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
             +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P  + 
Sbjct: 945  QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIPKISN 994

Query: 606  DNVEGRGSTPNN 617
                G G++ +N
Sbjct: 995  AYARGSGASTSN 1006


>gi|41281630|ref|NP_571458.1| neural cell adhesion molecule L1.1 precursor [Danio rerio]
 gi|36142988|gb|AAQ85079.1| neural adhesion molecule L1.1 [Danio rerio]
          Length = 1269

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 182/390 (46%), Gaps = 9/390 (2%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           R   + LR + + L CI  G P P+  W +    ++P +R  +    + L I +V  SD 
Sbjct: 254 RSSYLVLRGQTLTLECIPEGLPTPEVHWDRIDSALSP-NRTKKLYNNRWLQIDNVLESDD 312

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHW 159
           G Y C   N     K +   ++V AAPY+T  PE    A  ETV  +C+A G+P P I W
Sbjct: 313 GEYVCTARNSENSVKHH-YTVTVEAAPYWTRRPEEHLYAPGETVRLDCQADGIPAPNITW 371

Query: 160 VHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
             NG P+S    +PRR+V   ++ + N+  SDT  Y C A N  G +  + +V+V+    
Sbjct: 372 SINGVPVSGTDVDPRRRVSSGKLILSNVEFSDTAVYQCEAVNKHGSILINTHVHVVELPA 431

Query: 220 EITEAPKDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITD 276
           +I    +  Y    G+TV+L CR FG+P P+++W  + +   L+  + + +  G LKI++
Sbjct: 432 QILTPDERLYQATAGQTVMLDCRTFGSPLPKIHWEILDSIPALSNAKISQMTNGSLKISN 491

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
           V+  DS  YTC       +   S  L V   T I   P++  V  G  A   C    D +
Sbjct: 492 VSEEDSNRYTCSVSETNKSI--SAELEVLNRTKIVGPPQNLHVIRGSDAILHCKYTVDHN 549

Query: 337 LKLSIV-WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
           LK   V W +    I   +        + SL V      D G Y+C   T LD   A   
Sbjct: 550 LKSPTVQWKKDGHKITASTSNDKYHEIEGSLKVLDVQMEDMGIYSCGVSTTLDSDTASGY 609

Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           +TVQ   + P +  L + ++ +   +SW P
Sbjct: 610 ITVQDKPDPPQSLKLSEKME-RSVTISWMP 638



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 159/573 (27%), Positives = 243/573 (42%), Gaps = 79/573 (13%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNA 199
           +T+T EC   GLP PE+HW      +S   PN  +K+  NR + I+N+ +SD G Y C A
Sbjct: 263 QTLTLECIPEGLPTPEVHWDRIDSALS---PNRTKKLYNNRWLQIDNVLESDDGEYVCTA 319

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL 259
            NS   V     V V A AP  T  P++     G+TV L C+  G P P + W  N   +
Sbjct: 320 RNSENSVKHHYTVTVEA-APYWTRRPEEHLYAPGETVRLDCQADGIPAPNITWSINGVPV 378

Query: 260 TGGRYT---ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           +G        + +G L +++V F+D+  Y C A NK       GS+ +  H H+ + P  
Sbjct: 379 SGTDVDPRRRVSSGKLILSNVEFSDTAVYQCEAVNK------HGSILINTHVHVVELPAQ 432

Query: 317 --------YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                   Y+  AGQ+    C     P  K+    L   + I   S  +  Q  + SL +
Sbjct: 433 ILTPDERLYQATAGQTVMLDCRTFGSPLPKIHWEIL---DSIPALSNAKISQMTNGSLKI 489

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAP-SNFTLIQVIDA---KKAVVSWN 424
           +  SE DS +YTC        I A+  +  +  +  P  N  +I+  DA    K  V  N
Sbjct: 490 SNVSEEDSNRYTCSVSETNKSISAELEVLNRTKIVGPPQNLHVIRGSDAILHCKYTVDHN 549

Query: 425 PVSPQSLRGHFRGYKVQTWTEKDG----EGSIREL--------IVNKGESTTTEVDKFVP 472
             SP +++    G+K+   T  D     EGS++ L        I + G STT + D    
Sbjct: 550 LKSP-TVQWKKDGHKITASTSNDKYHEIEGSLKVLDVQMEDMGIYSCGVSTTLDSDT--- 605

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
           AS                      ++T +  P   QSL+       +  + W+   + N 
Sbjct: 606 AS---------------------GYITVQDKPDPPQSLKLSEKMERSVTISWMPSVENNS 644

Query: 533 VLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 592
            +  Y I+    +    G   +   Y S           L+P +KY   +      G  A
Sbjct: 645 PVTEYVIEMNEGETPDEGQWQK---YRSVSQDIRQLEIHLQPYSKYHFQIRAVNSIGTSA 701

Query: 593 ESKY-LFYV-----PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR-HN 645
            S+  L Y      P +NP+NV    + P +++ISW  M   + N P F+Y++FWRR  +
Sbjct: 702 PSESSLSYSTPAAKPDRNPENVMTLSTDPKSMIISWQEMDRRQFNGPGFQYKVFWRRAAD 761

Query: 646 TGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           +G  W +  V       L++ N  TF  +EIKV
Sbjct: 762 SGAHWTESSV---SNPPLLVNNTGTFVSFEIKV 791



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 103/232 (44%), Gaps = 24/232 (10%)

Query: 379  YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            +  + Q   D   A   LTV        PLEAPS  ++ + +     +V W+PV P+S+R
Sbjct: 787  FEIKVQAVNDLGAAPEPLTVIGYSGEDFPLEAPSALSVTE-LQKTSVMVRWSPVRPESVR 845

Query: 433  GHFRGYKVQTWTEKD------------GEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
            GH  GYK+    +              G  ++ E+  +  E   +++  +   S     +
Sbjct: 846  GHLLGYKIYLRMKGPSGRLRAGRSPAVGNPTVIEVPADAAEKIVSDLQYY---SDYTLTI 902

Query: 481  LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
             AFN    GP SE  SF TPEG PG V  L       S   L+W  P +PNG + GY ++
Sbjct: 903  TAFNSKGEGPHSEESSFSTPEGAPGPVLFLPFDSPSESEITLRWEAPHKPNGEIRGYLLQ 962

Query: 541  YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 592
            YQ V      P  + +  I  P  T   L  L P ++Y  HL+    AGDGA
Sbjct: 963  YQEVVIGSESP--QHVESIDLPAVTEFTLKNLNPESRYTFHLSARNSAGDGA 1012



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 142/353 (40%), Gaps = 28/353 (7%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
           V L C   G P P   W KDG      + +S+           + F  QG+Y C  +N +
Sbjct: 67  VNLACEASGDPSPSFRWVKDGKQFG--EVLSESGTLTPHPTMDLHFY-QGTYRCYAANEL 123

Query: 111 GEAKSYSIDLSVLAAPYFTVEPEFINAAEE--ETVTFECK-ASGLPEPEIHWVHNGKPIS 167
           G A S  + L+    P      +    A E  E+    C        P+IHW+       
Sbjct: 124 GTAVSNLVHLTTEPVPSLAKVKKQKRRAYEVGESAVLRCNPPKSSVTPKIHWM--DMQFH 181

Query: 168 QAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNA--TNSLGYVYKD---VYV-------- 212
             P N R  +  +  +   NL  +D+  +Y CNA   N+   + K+   +YV        
Sbjct: 182 HIPLNERVTISRDGNLYFANLIANDSRDDYTCNAHYINASIILPKEPMSIYVTPSNSVVK 241

Query: 213 NVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD- 271
           N  A       A      + G+T+ L C   G P PEV+W      L+  R   L     
Sbjct: 242 NRRAKLHHPAGARSSYLVLRGQTLTLECIPEGLPTPEVHWDRIDSALSPNRTKKLYNNRW 301

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
           L+I +V  +D GEY C ARN   + +   ++TV+   + T +PE++    G++    C A
Sbjct: 302 LQIDNVLESDDGEYVCTARNSENSVKHHYTVTVEAAPYWTRRPEEHLYAPGETVRLDCQA 361

Query: 332 VSDPSLKLSIVWLRGSEPID-FESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
              P+   +I W     P+   + +PR   S+   L ++     D+  Y C A
Sbjct: 362 DGIPA--PNITWSINGVPVSGTDVDPRRRVSSG-KLILSNVEFSDTAVYQCEA 411



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 117/302 (38%), Gaps = 40/302 (13%)

Query: 125 APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
           AP FT +P    A   + V   C+ASG P P   WV +GK   +   +    + P+    
Sbjct: 49  APEFTTQPVPHTAFSLDDVNLACEASGDPSPSFRWVKDGKQFGEV-LSESGTLTPHPTMD 107

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE---YTVDGKTVVLTCR 241
            +  +   G Y C A N LG    ++        P + +  K +   Y V G++ VL C 
Sbjct: 108 LHFYQ---GTYRCYAANELGTAVSNLVHLTTEPVPSLAKVKKQKRRAYEV-GESAVLRC- 162

Query: 242 VFGAPK----PEVNWIHNQKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA----- 289
               PK    P+++W+  Q        R TI   G+L   ++   DS  +YTC A     
Sbjct: 163 --NPPKSSVTPKIHWMDMQFHHIPLNERVTISRDGNLYFANLIANDSRDDYTCNAHYINA 220

Query: 290 -----RNKLGTAQGSGSLTVKEHTHITDQP----EDYEVEAGQSATFRCNAVSDPSLKLS 340
                +  +       +  VK        P      Y V  GQ+ T  C     P+ +  
Sbjct: 221 SIILPKEPMSIYVTPSNSVVKNRRAKLHHPAGARSSYLVLRGQTLTLECIPEGLPTPE-- 278

Query: 341 IVWLRGSEPIDFESEPRFVQS--NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           + W R    ID    P   +   N+  L +    E D G+Y C A+   + ++   T+TV
Sbjct: 279 VHWDR----IDSALSPNRTKKLYNNRWLQIDNVLESDDGEYVCTARNSENSVKHHYTVTV 334

Query: 399 QV 400
           + 
Sbjct: 335 EA 336



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 72/193 (37%), Gaps = 33/193 (17%)

Query: 209 DVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE 268
           D   N L  APE T  P          V L C   G P P   W+ + K+       + E
Sbjct: 40  DYTYNKLKQAPEFTTQPVPHTAFSLDDVNLACEASGDPSPSFRWVKDGKQFGE---VLSE 96

Query: 269 TGDLK---ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----------E 315
           +G L      D+ F   G Y C+A N+LGTA       V    H+T +P          +
Sbjct: 97  SGTLTPHPTMDLHFYQ-GTYRCYAANELGTA-------VSNLVHLTTEPVPSLAKVKKQK 148

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP---RFVQSNDYSLTVTKSS 372
               E G+SA  RCN     S+   I W+     + F   P   R   S D +L      
Sbjct: 149 RRAYEVGESAVLRCNPPKS-SVTPKIHWMD----MQFHHIPLNERVTISRDGNLYFANLI 203

Query: 373 ELDS-GQYTCRAQ 384
             DS   YTC A 
Sbjct: 204 ANDSRDDYTCNAH 216


>gi|449269777|gb|EMC80528.1| Contactin-5, partial [Columba livia]
          Length = 985

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 164/608 (26%), Positives = 262/608 (43%), Gaps = 51/608 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSK-DGVPINPSD---RISQGNYGKSLIIKHVEFSDQGSYTC 104
           K V + C   G P+P   W K +G   NPS    R SQ      L I +V+  D G Y C
Sbjct: 201 KGVNMECFALGNPVPTISWRKVNG--HNPSKARLRKSQA----VLEIPNVQLEDAGVYEC 254

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           +  N  G    +   L V   P++  +         + + +ECKA+G P P   W+ NG 
Sbjct: 255 KAENSRGR-NVFRGQLQVYTYPHWVEKLNDTQLDSGDQLRWECKATGKPRPTYRWLKNGV 313

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE--IT 222
           P+    P  R ++    + I ++  SD G Y C A N  G +Y    + +LA AP   + 
Sbjct: 314 PLW---PQSRIEMVNGVLMIHSVNLSDAGMYQCLAENKYGTIYASAELKILASAPTFPLN 370

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           +  K      G+ VV+ C+   +PKP + W    K L    R TIL  G L+I + + +D
Sbjct: 371 QMRKTIIVTKGQEVVIECKPQASPKPTITWKKGDKALRENKRITILPHGSLRILNASKSD 430

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G Y C   N  G+A+   S++VKE T +   P+  E+  G+S    C A+ D +L ++ 
Sbjct: 431 EGRYLCQGVNVFGSAEIIASVSVKEPTRMELTPKKIELMVGESVVLSCKALHDSTLDVTF 490

Query: 342 VWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W    +PIDFE E         Q++   L +       +G+Y CR QT  D +  +  L
Sbjct: 491 YWTLNGQPIDFEKEGGHFESIKAQASSADLMIRNILLTHAGRYGCRVQTAADTVSDETEL 550

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEKD-GEGS 451
            V+ P   P    +++ I    A +SW+P     SP SL      Y +Q  +    G  +
Sbjct: 551 LVRGP-PGPPGVVIVEEITDTTATLSWSPGADNHSPISL------YNLQARSPFSLGWQT 603

Query: 452 IRELI-VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQS 509
           ++ +  V  G+  +    +  P  +   RV+A N    G PS     + T E VP T  +
Sbjct: 604 VKTVPEVISGDMESAMAVELNPWVEYEFRVVATNKIGTGDPSAPSRVIRTNEAVPKTPPA 663

Query: 510 LEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISDPTT 564
             +   G      + W  V  E  NG   GY + ++    +G K     E++   SD + 
Sbjct: 664 NVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSDASK 718

Query: 565 TSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNLV 619
              +   + P T + + +  Y   GDG  S  +        P   P +V+    + + ++
Sbjct: 719 FIYRDESVPPLTPFEVKVGVYNNKGDGPFSPIVVICSAEGEPTAAPIDVKATSLSVSEIL 778

Query: 620 ISWTAMPE 627
           ++W  + E
Sbjct: 779 VAWKHIKE 786



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 161/667 (24%), Positives = 244/667 (36%), Gaps = 88/667 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPY-FTVEPEFINAAEE------ 140
           +L I  V+ SD GSY C V N V  A+       VL+ P   T+  + I   +       
Sbjct: 141 NLYISKVQTSDVGSYICLVKNTVTNAR-------VLSPPTPLTLRNDGIQNDDMTKNIQY 193

Query: 141 -------ETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDT 192
                  + V  EC A G P P I W   NG      P   R +     + I N++  D 
Sbjct: 194 LYRLHLLKGVNMECFALGNPVPTISWRKVNG----HNPSKARLRKSQAVLEIPNVQLEDA 249

Query: 193 GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNW 252
           G Y C A NS G       + V  + P   E   D     G  +   C+  G P+P   W
Sbjct: 250 GVYECKAENSRGRNVFRGQLQVYTY-PHWVEKLNDTQLDSGDQLRWECKATGKPRPTYRW 308

Query: 253 IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--- 309
           + N   L       +  G L I  V  +D+G Y C A NK GT   S  L +        
Sbjct: 309 LKNGVPLWPQSRIEMVNGVLMIHSVNLSDAGMYQCLAENKYGTIYASAELKILASAPTFP 368

Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
           +    +   V  GQ     C   + P  K +I W +G + +      R       SL + 
Sbjct: 369 LNQMRKTIIVTKGQEVVIECKPQASP--KPTITWKKGDKAL--RENKRITILPHGSLRIL 424

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVS------- 422
            +S+ D G+Y C+        E  A+++V+ P         I+++  +  V+S       
Sbjct: 425 NASKSDEGRYLCQGVNVFGSAEIIASVSVKEPTRMELTPKKIELMVGESVVLSCKALHDS 484

Query: 423 -------W----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFV 471
                  W     P+  +   GHF   K Q       +  IR +++         V    
Sbjct: 485 TLDVTFYWTLNGQPIDFEKEGGHFESIKAQA---SSADLMIRNILLTHAGRYGCRVQTAA 541

Query: 472 PASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS--SAFYLKWVKPEQ 529
               +   +L       GPP  +I     E +  T  +L   P     S   L  ++   
Sbjct: 542 DTVSDETELLVRGPP--GPPGVVIV----EEITDTTATLSWSPGADNHSPISLYNLQARS 595

Query: 530 PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           P      + + +Q+VK          +P +      SA    L P  +Y   +    K G
Sbjct: 596 P------FSLGWQTVK---------TVPEVISGDMESAMAVELNPWVEYEFRVVATNKIG 640

Query: 590 DG---AESKYLF---YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G   A S+ +     VP   P NV GR    + LVI+W  + E   N   F Y + +R 
Sbjct: 641 TGDPSAPSRVIRTNEAVPKTPPANVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRP 700

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGS-IRELIVNKGE 700
           + T   W +  V     S+ +  ++  P   P+E+KV     + DG  S I  +   +GE
Sbjct: 701 NGT-RGWKEKMVTSSDASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSPIVVICSAEGE 759

Query: 701 STTTEVD 707
            T   +D
Sbjct: 760 PTAAPID 766



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 157/677 (23%), Positives = 269/677 (39%), Gaps = 71/677 (10%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+GVP+ P  RI   N    L+I  V  SD G Y C   N  G   
Sbjct: 296 CKATGKPRPTYRWLKNGVPLWPQSRIEMVN--GVLMIHSVNLSDAGMYQCLAENKYGTIY 353

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L +LA AP F +    + I   + + V  ECK    P+P I W    K + +   
Sbjct: 354 A-SAELKILASAPTFPLNQMRKTIIVTKGQEVVIECKPQASPKPTITWKKGDKALRE--- 409

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE-APKDEY 229
           N R  + P+  + I N  KSD G Y C   N  G    ++  +V    P   E  PK   
Sbjct: 410 NKRITILPHGSLRILNASKSDEGRYLCQGVNVFGSA--EIIASVSVKEPTRMELTPKKIE 467

Query: 230 TVDGKTVVLTCRVFGAPKPEVN--WIHNQK----ELTGGRYTILE----TGDLKITDVAF 279
            + G++VVL+C+       +V   W  N +    E  GG +  ++    + DL I ++  
Sbjct: 468 LMVGESVVLSCKALHDSTLDVTFYWTLNGQPIDFEKEGGHFESIKAQASSADLMIRNILL 527

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVK-----EHTHITDQPEDYEVEAGQSATFRCNAVSD 334
             +G Y C  +    T      L V+         I ++  D       +AT   +  +D
Sbjct: 528 THAGRYGCRVQTAADTVSDETELLVRGPPGPPGVVIVEEITD------TTATLSWSPGAD 581

Query: 335 PSLKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
               +S+  L+   P        ++ P  +  +  S    + +     ++   A  ++  
Sbjct: 582 NHSPISLYNLQARSPFSLGWQTVKTVPEVISGDMESAMAVELNPWVEYEFRVVATNKIGT 641

Query: 390 IEAQATLTV-----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWT 444
            +  A   V      VP   P+N +  +     + V++W PVS +   G   GY V  + 
Sbjct: 642 GDPSAPSRVIRTNEAVPKTPPANVSG-RSGRRHELVIAWEPVSEEFQNGEGFGYIV-AFR 699

Query: 445 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNF-ARVLAFNGAYNGPPSEIISFVTPEGV 503
                G   +++ +   S     D+ VP    F  +V  +N   +GP S I+   + EG 
Sbjct: 700 PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSPIVVICSAEGE 759

Query: 504 PGTVQ-SLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
           P      ++A  L  S   + W   ++  G   G+++ Y   K  +     E++   ++ 
Sbjct: 760 PTAAPIDVKATSLSVSEILVAWKHIKESLGRPQGFEVGYW--KDMEQEEAAEKVK--TEG 815

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLV--- 619
             +S  L GLE +T Y + +  Y  AG G  S  +     K+P +       P+N++   
Sbjct: 816 NESSILLTGLEGNTLYHLTVRAYNAAGYGPPSSAVRAATKKSPPS-----QAPSNIMWIQ 870

Query: 620 ------ISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
                 + W  +  + + +    Y++ +R+    E  +   V++ +++  V+   P    
Sbjct: 871 DGSHVSLGWEPVRPLANESDVMGYKVLFRQ----EGQSNSQVIETQKTSAVVL-LPDAGV 925

Query: 674 YEIKVVQTWTEKDGEGS 690
           Y I+V       DG  S
Sbjct: 926 YIIEVCAVSEGGDGTAS 942



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 145/391 (37%), Gaps = 70/391 (17%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH-VEFSDQGSYTCEVS 107
           KKV L C   G P P   W ++G  I+            SLIIK   E  D G Y C  S
Sbjct: 26  KKVSLNCQARGNPTPTYRWLRNGTEIDIESDYRFSLIEGSLIIKDPSEMKDSGQYQCLTS 85

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGL----PEPEIHWVHNG 163
           N  G   S                        E  + F C+ S L     E    WV N 
Sbjct: 86  NMFGTILS-----------------------REAVLQFACECSVLESEGSEIIYSWVFNE 122

Query: 164 KPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP-- 219
            P S    + RR +      + I  ++ SD G+Y C        + K+   N    +P  
Sbjct: 123 FP-SFVAEDSRRFISQETGNLYISKVQTSDVGSYIC--------LVKNTVTNARVLSPPT 173

Query: 220 ------------EITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNWI----HNQKELTGG 262
                       ++T+  +  Y +   K V + C   G P P ++W     HN  +    
Sbjct: 174 PLTLRNDGIQNDDMTKNIQYLYRLHLLKGVNMECFALGNPVPTISWRKVNGHNPSKARLR 233

Query: 263 RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAG 322
           +   +    L+I +V   D+G Y C A N  G     G L V  + H  ++  D ++++G
Sbjct: 234 KSQAV----LEIPNVQLEDAGVYECKAENSRGRNVFRGQLQVYTYPHWVEKLNDTQLDSG 289

Query: 323 QSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCR 382
               + C A   P  + +  WL+   P+  +S    V      L +   +  D+G Y C 
Sbjct: 290 DQLRWECKATGKP--RPTYRWLKNGVPLWPQSRIEMVNG---VLMIHSVNLSDAGMYQCL 344

Query: 383 AQTELDFIEAQATLTVQVPLEAPSNFTLIQV 413
           A+ +   I A A L +   L +   F L Q+
Sbjct: 345 AENKYGTIYASAELKI---LASAPTFPLNQM 372



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 105/279 (37%), Gaps = 39/279 (13%)

Query: 121 SVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
           SV   P F  EP+   F   +EE+ V+  C+A G P P   W+ NG  I          +
Sbjct: 3   SVDYGPVFVQEPDDVIFPTDSEEKKVSLNCQARGNPTPTYRWLRNGTEIDIESDYRFSLI 62

Query: 178 GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV 237
             + I  +     D+G Y C  +N  G +     V   A    + E+       +G  ++
Sbjct: 63  EGSLIIKDPSEMKDSGQYQCLTSNMFGTILSREAVLQFACECSVLES-------EGSEII 115

Query: 238 LTCRVFGAPKPEVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKL 293
            +            W+ N+          R+   ETG+L I+ V  +D G Y C  +N +
Sbjct: 116 YS------------WVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 163

Query: 294 GTAQGSGSLTVKEHTHITDQPED--------YEVEAGQSATFRCNAVSDPSLKLSIVWLR 345
             A+     T     +   Q +D        Y +   +     C A+ +P   +S   + 
Sbjct: 164 TNARVLSPPTPLTLRNDGIQNDDMTKNIQYLYRLHLLKGVNMECFALGNPVPTISWRKVN 223

Query: 346 GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           G  P    S+ R  +S    L +      D+G Y C+A+
Sbjct: 224 GHNP----SKARLRKSQAV-LEIPNVQLEDAGVYECKAE 257



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           RK  +  + ++V + C    +P P   W K    +  + RI+   +G SL I +   SD+
Sbjct: 373 RKTIIVTKGQEVVIECKPQASPKPTITWKKGDKALRENKRITILPHG-SLRILNASKSDE 431

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEI 157
           G Y C+  N  G A+  +  +SV       + P+ I     E+V   CKA      +   
Sbjct: 432 GRYLCQGVNVFGSAEIIA-SVSVKEPTRMELTPKKIELMVGESVVLSCKALHDSTLDVTF 490

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W  NG+PI          + + +     + I N+  +  G YGC
Sbjct: 491 YWTLNGQPIDFEKEGGHFESIKAQASSADLMIRNILLTHAGRYGC 535


>gi|426249269|ref|XP_004018372.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 3
           [Ovis aries]
          Length = 1171

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 180/715 (25%), Positives = 306/715 (42%), Gaps = 70/715 (9%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
            L+   + L C   G P P+  W K G  + P    S+ N   +L I++V + D+G+Y C
Sbjct: 268 VLKGDTLLLECFAEGLPTPKVAWDKMGGDL-PKGGESKNNSVDTLKIENVSYEDKGNYRC 326

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
             +N +G A ++   ++V   P +T +P+    +   +    C+A G PEP I W  NG 
Sbjct: 327 TANNFLGSA-THEFHVTVEEPPRWTKKPQSGVYSTGSSGILLCEAEGRPEPTIKWRVNGL 385

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           PI + P +    + P  I+  N++ + T  Y C A+N  G +  +  ++V+   P I  A
Sbjct: 386 PIERNPFS-GDVISPGEISFTNVQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQTA 444

Query: 225 PKDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFAD 281
            ++ Y TV G +  L C  F +P+  V+W  +   K L G RY + E G L+IT+    D
Sbjct: 445 DEENYATVVGYSAFLHCEFFASPEAIVSWQKVEEAKPLDGSRYHVHENGTLQITETTEED 504

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--L 339
           +G Y+C+  N  G    + +L ++  T++   P++  V    +    C +  D  LK  L
Sbjct: 505 AGSYSCWVENAKGKTAVTANLDIRNATNLRVSPKNPRVPKSHTLELHCESKCDSHLKYSL 564

Query: 340 SIVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
            + W +  E  +   ++   +  +  +LT++  +  D G Y+C A T LD I     +TV
Sbjct: 565 KLSWSKDGEAFEINGTDDGRIIIDGANLTISNVTMEDEGIYSCSAHTALDSIADMTQVTV 624

Query: 399 QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVN 458
               + P N  L +  + +   ++W   +      +   Y V+    K+  G   EL   
Sbjct: 625 LDVPDPPENLHLSERQN-RSVRLTWE--AGDDHNSNISEYIVEFEGNKEEPGRWEELTRV 681

Query: 459 KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLG 516
           +G+ TT  V    P  +   RV+A N      PS       TP   P    Q++      
Sbjct: 682 QGKETTV-VLSLAPYVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQ 740

Query: 517 SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
                +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P
Sbjct: 741 PKEMIIKWEPLKAMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTP 791

Query: 575 ST--KYRIHLAGYTKAGDGAESK-YLFYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPE 627
           +    Y + +      G G E +  + Y     PD    ++G     + LV ++W+ +P+
Sbjct: 792 AVYAPYDVQVQAINHLGSGPEPQSVILYSGEDYPDTAPVIQGVDVINSTLVKVTWSTVPK 851

Query: 628 IEHNAPHFK-YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKD 686
            E    H K Y++ W        W    +LD R             P E+ +++ ++ + 
Sbjct: 852 -ERVHGHLKGYQVNW--------WKTKSLLDGRT-----------HPKEVNILR-FSGQR 890

Query: 687 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
             G +  L            D F   S+    VLA+N    GP SE   F TPEG
Sbjct: 891 NYGMVPSL------------DAF---SEFHLTVLAYNSKGAGPESEPFIFQTPEG 930



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 139/652 (21%), Positives = 255/652 (39%), Gaps = 79/652 (12%)

Query: 54  FCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113
           +C F   P  +TI  K  + +  +             +KHV  S   +     +N + + 
Sbjct: 202 YCCFAAFPRLRTIVQKMPMKLTVNS------------LKHVNDSSSSTENISKANSIKQR 249

Query: 114 KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           K       +L  P  +     I   + +T+  EC A GLP P++ W   G  + +   + 
Sbjct: 250 KP-----RLLLPPPESGSESSITVLKGDTLLLECFAEGLPTPKVAWDKMGGDLPKGGESK 304

Query: 174 RRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDG 233
              V  + + IEN+   D GNY C A N LG    + +V V    P  T+ P+      G
Sbjct: 305 NNSV--DTLKIENVSYEDKGNYRCTANNFLGSATHEFHVTV-EEPPRWTKKPQSGVYSTG 361

Query: 234 KTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCFARN 291
            + +L C   G P+P + W  N   +    ++  ++  G++  T+V    +  Y C A N
Sbjct: 362 SSGILLCEAEGRPEPTIKWRVNGLPIERNPFSGDVISPGEISFTNVQPNHTAVYQCEASN 421

Query: 292 KLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEP 349
             GT   + ++ V +   +  T   E+Y    G SA   C   + P   +S   +  ++P
Sbjct: 422 VHGTILANANIDVVDVRPLIQTADEENYATVVGYSAFLHCEFFASPEAIVSWQKVEEAKP 481

Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFT 409
           +D     R+    + +L +T+++E D+G Y+C  +      + +  +T  + +   +N  
Sbjct: 482 LDGS---RYHVHENGTLQITETTEEDAGSYSCWVEN----AKGKTAVTANLDIRNATNLR 534

Query: 410 LIQVIDAKKAVVSWNPVSPQS----------LRGHFRGYKVQTWTEKDGEG------SIR 453
                     V   NP  P+S             H +     +W+ KDGE          
Sbjct: 535 ----------VSPKNPRVPKSHTLELHCESKCDSHLKYSLKLSWS-KDGEAFEINGTDDG 583

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAI 513
            +I++    T + V        + +   A +   +      ++ VT   VP   ++L   
Sbjct: 584 RIIIDGANLTISNVTMEDEGIYSCSAHTALDSIAD------MTQVTVLDVPDPPENLHLS 637

Query: 514 PLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGL 572
              + +  L W   +  N  +  Y ++++   G K  P   E L  +    TT   +  L
Sbjct: 638 ERQNRSVRLTWEAGDDHNSNISEYIVEFE---GNKEEPGRWEELTRVQGKETTV--VLSL 692

Query: 573 EPSTKYRIHLAGYTKAGDGAESKYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMP 626
            P  +Y+  +    + G    S    +       P KNP N+  + S P  ++I W  + 
Sbjct: 693 APYVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLK 752

Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            +E N P  +YR+ W+       W ++ V +     L +     + PY+++V
Sbjct: 753 AMEQNGPGLEYRVTWKPQGAPVEWEEETVTN---HTLRVMTPAVYAPYDVQV 801



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 138/575 (24%), Positives = 236/575 (41%), Gaps = 51/575 (8%)

Query: 53   LFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L C F  +P     W K  +  P++ S      N   +L I      D GSY+C V N  
Sbjct: 459  LHCEFFASPEAIVSWQKVEEAKPLDGSRYHVHEN--GTLQITETTEEDAGSYSCWVENAK 516

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA---SGLP-EPEIHWVHNGKPI 166
            G+  + + +L +  A    V P+     +  T+   C++   S L    ++ W  +G+  
Sbjct: 517  GKT-AVTANLDIRNATNLRVSPKNPRVPKSHTLELHCESKCDSHLKYSLKLSWSKDGEAF 575

Query: 167  S-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
                  + R  +    +TI N+   D G Y C+A  +L  +     V VL    ++ + P
Sbjct: 576  EINGTDDGRIIIDGANLTISNVTMEDEGIYSCSAHTALDSIADMTQVTVL----DVPDPP 631

Query: 226  KDEYTVD--GKTVVLTCRVFGAPKPE-----VNWIHNQKELTGGRYTILETGDLKITDVA 278
            ++ +  +   ++V LT               V +  N++E   GR+  L     K T V 
Sbjct: 632  ENLHLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEE--PGRWEELTRVQGKETTVV 689

Query: 279  FADSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSAT------ 326
             + +     ++   A N++G +Q S      E         P++  V+A Q         
Sbjct: 690  LSLAPYVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWE 749

Query: 327  -FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
              +    + P L+  + W     P+++E E       +++L V   +         +A  
Sbjct: 750  PLKAMEQNGPGLEYRVTWKPQGAPVEWEEE----TVTNHTLRVMTPAVYAPYDVQVQAIN 805

Query: 386  ELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKAVVSWNPVSPQSLRGHFRGYKVQT 442
             L       ++ +    + P    +IQ   VI++    V+W+ V  + + GH +GY+V  
Sbjct: 806  HLGSGPEPQSVILYSGEDYPDTAPVIQGVDVINSTLVKVTWSTVPKERVHGHLKGYQVNW 865

Query: 443  WTEK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
            W  K   DG    +E+ + +  G+     V      S+    VLA+N    GP SE   F
Sbjct: 866  WKTKSLLDGRTHPKEVNILRFSGQRNYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPFIF 925

Query: 498  VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERL 556
             TPEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T ++G L +  
Sbjct: 926  QTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGNLTGYLLQYQIINDTDEIGELNDI- 984

Query: 557  PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
              I+ P+  S +L  L  +TKY+ +L   T  G G
Sbjct: 985  -NITTPSKPSWRLLNLNATTKYKFYLRACTSKGCG 1018



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 136/340 (40%), Gaps = 45/340 (13%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSD-RISQGNYGKSLIIK---HVEFSDQGSYTCEVS 107
           ++ C+  G P P+ +W+KD  P N SD RI   N G +  I    H+    QG Y C  S
Sbjct: 54  QIECVAKGNPEPKFLWNKDDKPFNLSDPRIIVSNNGGTFRIPNDGHISHF-QGKYRCFAS 112

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGK 164
           N +G A S  I+  V   P F  E  + +   E + +   C    GLP   I+W++   +
Sbjct: 113 NKLGIAMSEEIEFIVPNTPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELE 172

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA 218
            I Q       + G   +   N+ + D+ N Y C A        +  +   + VN L H 
Sbjct: 173 HIKQDERVYMSQKG--DLYFANVEEQDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHV 230

Query: 219 --------------------PEITEAPKDE------YTVDGKTVVLTCRVFGAPKPEVNW 252
                               P +   P +         + G T++L C   G P P+V W
Sbjct: 231 NDSSSSTENISKANSIKQRKPRLLLPPPESGSESSITVLKGDTLLLECFAEGLPTPKVAW 290

Query: 253 IHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT 311
                +L  GG         LKI +V++ D G Y C A N LG+A     +TV+E    T
Sbjct: 291 DKMGGDLPKGGESKNNSVDTLKIENVSYEDKGNYRCTANNFLGSATHEFHVTVEEPPRWT 350

Query: 312 DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID 351
            +P+      G S    C A   P  + +I W     PI+
Sbjct: 351 KKPQSGVYSTGSSGILLCEAEGRP--EPTIKWRVNGLPIE 388



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 115/311 (36%), Gaps = 51/311 (16%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN----RITIENLRKSDTGNY 195
           +E    EC A G PEP+  W  + KP + +  +PR  V  N    RI  +       G Y
Sbjct: 50  DEYFQIECVAKGNPEPKFLWNKDDKPFNLS--DPRIIVSNNGGTFRIPNDGHISHFQGKY 107

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A+N LG    +    ++ + P+  +   D   V +G  +VL C    G P   + W+
Sbjct: 108 RCFASNKLGIAMSEEIEFIVPNTPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWM 167

Query: 254 HNQKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEH 307
           + + E      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV   
Sbjct: 168 NIELEHIKQDERVYMSQKGDLYFANVEEQDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSL 227

Query: 308 THITDQPEDYE-----------------------------VEAGQSATFRCNAVSDPSLK 338
            H+ D     E                             V  G +    C A   P+ K
Sbjct: 228 KHVNDSSSSTENISKANSIKQRKPRLLLPPPESGSESSITVLKGDTLLLECFAEGLPTPK 287

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           ++   + G  P   ES+   V     +L +   S  D G Y C A   L      AT   
Sbjct: 288 VAWDKMGGDLPKGGESKNNSVD----TLKIENVSYEDKGNYRCTANNFL----GSATHEF 339

Query: 399 QVPLEAPSNFT 409
            V +E P  +T
Sbjct: 340 HVTVEEPPRWT 350


>gi|410951600|ref|XP_003982482.1| PREDICTED: contactin-4, partial [Felis catus]
          Length = 1021

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 185/723 (25%), Positives = 289/723 (39%), Gaps = 104/723 (14%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P  IW + DG PI    R  + +    L I + +  D G Y C   N 
Sbjct: 238 VKLECFALGNPVPTIIWRRADGKPIARKARRHKSS--GILEIPNFQQEDAGLYECVAENS 295

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P +  E    + A EE V +ECKA+G P+P   W+ NG+P+   
Sbjct: 296 RGKNVARG-QLTFYAQPNWIQEINDTHVAIEENVFWECKANGRPKPTYRWLKNGEPLFT- 353

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
               R ++    + I  +  SD G Y C A N  G ++    ++V+A  P+ +       
Sbjct: 354 --RDRIQIEQGMLNITVVNLSDAGMYQCVAENKHGVIFSSAELSVIAAGPDFSRTLLKRV 411

Query: 230 TVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADSGEYT 286
           T+   G  VV+ C+   +PKP   W   +  L    R TI E G L+I +V  +D+G YT
Sbjct: 412 TLVKVGGEVVIECKPKASPKPVYTWKKGRDILRENERITISEDGSLRIVNVTKSDAGSYT 471

Query: 287 CFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           C A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   W   
Sbjct: 472 CVATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFN 531

Query: 347 SEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
              IDF+ +         Q +   L +       +G+Y C  QT +D + A A L V+ P
Sbjct: 532 GHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGP 591

Query: 402 LEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGEGSIR 453
              P   T+ ++ D   A +SW P     SP ++      Y +Q  T          ++ 
Sbjct: 592 PGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFSVGWQAVNTVP 644

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTPEGVP 504
           ELI   G++ T  V    P  +   R +A N    G PS         E +  VTP  V 
Sbjct: 645 ELI--DGKTFTAAVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVS 702

Query: 505 GTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI--S 560
           G   S        S   + W  V  E  NG   GY + ++       G ++  L  +  +
Sbjct: 703 GGGGS-------KSELVITWETVPEELQNGRGFGYVVAFR-----PYGKMIWMLTVLASA 750

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTP 615
           D +    +   + P + + + +  +   G+G  S           P K P ++  R  + 
Sbjct: 751 DASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSA 810

Query: 616 NNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYE 675
            ++ + W +  E                                       N+   Q YE
Sbjct: 811 TDIEVFWASPME--------------------------------------KNRGRIQGYE 832

Query: 676 IKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS 735
           +K    W   D E + R+ I   G  T+T++     ++     V A+N A  GP S  ++
Sbjct: 833 VKY---WRHDDKEENARK-IRTIGNQTSTKITNLKGSALYHLAVKAYNTAGTGPSSATVN 888

Query: 736 FVT 738
             T
Sbjct: 889 VTT 891



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 163/638 (25%), Positives = 240/638 (37%), Gaps = 85/638 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V+ PE +  
Sbjct: 173 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPEMVPT 232

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   +GKPI++     RR      + I N ++ D G Y 
Sbjct: 233 AKGTTVKLECFALGNPVPTIIWRRADGKPIAR---KARRHKSSGILEIPNFQQEDAGLYE 289

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P   +   D +    + V   C+  G PKP   W+ N 
Sbjct: 290 CVAENSRGKNVARGQLTFYAQ-PNWIQEINDTHVAIEENVFWECKANGRPKPTYRWLKNG 348

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           + L       +E G L IT V  +D+G Y C A NK G    S  L+V     I   P+ 
Sbjct: 349 EPLFTRDRIQIEQGMLNITVVNLSDAGMYQCVAENKHGVIFSSAELSV-----IAAGPDF 403

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  K    W +G + I  E+E R   S D SL +
Sbjct: 404 SRTLLKRVTLVKVGGEVVIECKPKASP--KPVYTWKKGRD-ILRENE-RITISEDGSLRI 459

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
              ++ D+G YTC A        +   L V+ P       + + V   +  V+       
Sbjct: 460 VNVTKSDAGSYTCVATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHD 519

Query: 429 QSL----RGHFRGYKVQTWTEKD------GEGSIRELIVNKGE---------STTTEVDK 469
            SL       F G+ +    + D      G+ S  +L++   +            T VD+
Sbjct: 520 HSLDIVFTWSFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDR 579

Query: 470 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPE 528
              A+    R         GPP    +    E    T Q S    P   S   +  ++  
Sbjct: 580 LSAAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQAR 630

Query: 529 QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
            P      + + +Q+V           +P + D  T +A + GL P  +Y          
Sbjct: 631 TP------FSVGWQAVN---------TVPELIDGKTFTAAVVGLNPWVEYEFRTVAANVI 675

Query: 589 GDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F Y + +R
Sbjct: 676 GIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFR 735

Query: 643 RHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
            +     W    +     S  V  N+    F P+E+KV
Sbjct: 736 PYGK-MIWMLTVLASADASRYVFRNESVRPFSPFEVKV 772



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 122/478 (25%), Positives = 189/478 (39%), Gaps = 46/478 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  ++            SL+I +  +  D G+Y C  +
Sbjct: 39  KKVKLNCEVKGNPKPHIRWKLNGTDVDIGVDFRYSVVEGSLLINNPNKTQDAGTYQCIAT 98

Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVHN 162
           N  G   S    L       F T     ++  + + +   C   G P    E    W+ N
Sbjct: 99  NSFGTIVSREAKLQFAYLENFKTRTRSTVSVRQGQGMVLLC---GPPAHSGELSYAWIFN 155

Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN- 213
             P  Q   + RR V      + I  + KSD GNY C  TN+      LG     +  N 
Sbjct: 156 EYPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRND 212

Query: 214 --VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILET 269
             +  + P+I  + P+   T  G TV L C   G P P + W   + K +         +
Sbjct: 213 GVMGEYEPKIEVQFPEMVPTAKGTTVKLECFALGNPVPTIIWRRADGKPIARKARRHKSS 272

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I +    D+G Y C A N  G     G LT     +   +  D  V   ++  + C
Sbjct: 273 GILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQEINDTHVAIEENVFWEC 332

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   P  K +  WL+  EP+ F  +   ++    ++TV   S  D+G Y C A+ +   
Sbjct: 333 KANGRP--KPTYRWLKNGEPL-FTRDRIQIEQGMLNITVVNLS--DAGMYQCVAENKHGV 387

Query: 390 IEAQATLTVQVPLEAPSNF--TLIQVIDAKK----AVVSWNP-VSPQSLRGHFRGYKVQT 442
           I + A L+V   + A  +F  TL++ +   K     V+   P  SP+ +    +G  +  
Sbjct: 388 IFSSAELSV---IAAGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDILR 444

Query: 443 WTEK---DGEGSIRELIVNK---GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
             E+     +GS+R + V K   G  T    + F  AS     V+        PPS +
Sbjct: 445 ENERITISEDGSLRIVNVTKSDAGSYTCVATNHFGTASSTGNLVVKDPTRVMVPPSSM 502



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 117/302 (38%), Gaps = 32/302 (10%)

Query: 119 DLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D   L  P F  EP    F   +EE+ V   C+  G P+P I W  NG  +     + R 
Sbjct: 14  DDYTLHGPVFIQEPSHVMFPLNSEEKKVKLNCEVKGNPKPHIRWKLNGTDVDIG-VDFRY 72

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            V    + I N  K+ D G Y C ATNS G +         A+        +   +V  G
Sbjct: 73  SVVEGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRQG 132

Query: 234 KTVVLTCRVFGAP----KPEVNWIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYTC 287
           + +VL C   G P    +    WI N+        R+   ETG+L I  V  +D G YTC
Sbjct: 133 QGMVLLC---GPPAHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTC 189

Query: 288 FARNK------LG-----TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              N       LG       +  G +   E       PE      G +    C A+ +P 
Sbjct: 190 VVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPEMVPTAKGTTVKLECFALGNPV 249

Query: 337 LKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
              +I+W R   +PI    + R  +S+   L +    + D+G Y C A+       A+  
Sbjct: 250 --PTIIWRRADGKPI--ARKARRHKSSGI-LEIPNFQQEDAGLYECVAENSRGKNVARGQ 304

Query: 396 LT 397
           LT
Sbjct: 305 LT 306



 Score = 40.8 bits (94), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 23/191 (12%)

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
           RG  +GY+V+ W   D E + R+ I   G  T+T++     ++     V A+N A  GP 
Sbjct: 825 RGRIQGYEVKYWRHDDKEENARK-IRTIGNQTSTKITNLKGSALYHLAVKAYNTAGTGPS 883

Query: 492 SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
           S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 884 SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNR 939

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
            +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P    
Sbjct: 940 QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSPSEQI-RIP--KI 987

Query: 606 DNVEGRGSTPN 616
            N   RG+ P+
Sbjct: 988 SNAYARGAGPS 998


>gi|9506949|ref|NP_062202.1| contactin-3 precursor [Rattus norvegicus]
 gi|55976163|sp|Q62682.1|CNTN3_RAT RecName: Full=Contactin-3; AltName: Full=Brain-derived
           immunoglobulin superfamily protein 1; Short=BIG-1;
           Flags: Precursor
 gi|563133|gb|AAA63607.1| BIG-1 protein [Rattus norvegicus]
          Length = 1028

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 170/628 (27%), Positives = 266/628 (42%), Gaps = 42/628 (6%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P     +I    +   L I + +  D GSY 
Sbjct: 239 AAKGSTVKLECFALGNPVPQINWRRSDGMPF--PTKIKLRKFNGVLEIPNFQQEDTGSYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A PY+    + +  A E+++ +EC+ASG P+P   W+ NG
Sbjct: 297 CIAENSRGKNVARG-RLTYYAKPYWVQLLKDVETAVEDSLYWECRASGKPKPSYRWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +       R ++    +TI NL  SD+G + C A N  G +Y    + VLA AP+ + 
Sbjct: 356 DALVL---EERIQIENGALTIANLNVSDSGMFQCIAENKHGLIYSSAELKVLASAPDFSR 412

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
            P  +      G  V+L C+   +P+    W      +    R ++L  G LKI +V  A
Sbjct: 413 NPMKKMIQVQVGSLVILDCKPSASPRALSFWKKGDTVVREQARISLLNDGGLKIMNVTKA 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A G+  L V E T I   P + +V  G+S    C    DP L + 
Sbjct: 473 DAGIYTCIAENQFGKANGTTQLVVTEPTRIILAPSNMDVAVGESIILPCQVQHDPLLDIM 532

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 533 FAWYFNGTLTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAAEL 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKD-GEGSIR 453
            V+     P N  + ++ D   A +SW     +    H     Y VQ  T    G  ++R
Sbjct: 593 IVRGSPGPPENVKVDEITDT-TAQLSWT----EGTDSHSPVISYAVQARTPFSVGWQNVR 647

Query: 454 ---ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQS 509
              E I   G++ T  V +  P  +   RV+A N    G PS     V T E  P    S
Sbjct: 648 TVPEAI--DGKTRTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAAPEVAPS 705

Query: 510 LEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
             +   GS S   + W  V  E  NG   GY + ++ +    V   ++ +    D     
Sbjct: 706 EVSGGGGSRSELVITWDPVPEELQNGGGFGYVVAFRPL---GVTTWIQTVVTSPDNPRYV 762

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNNLVIS 621
            +   + P + Y + +  Y   G+G  S    +F     P   P ++     + + + +S
Sbjct: 763 FRNESIVPFSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVS 822

Query: 622 WTAMPEIEHNAPHFKYRI-FWRRHNTGE 648
           W  +P    N     Y + +W  +N GE
Sbjct: 823 WNTIPWKSSNGRLLGYEVRYW--NNGGE 848



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 162/625 (25%), Positives = 244/625 (39%), Gaps = 62/625 (9%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE----------------- 131
           L I  VE SD G+YTC V++ V  A+       VL +P   V                  
Sbjct: 181 LYIAKVEPSDVGNYTCVVTSTVTNAR-------VLGSPTPLVLRSDGVMGEYEPKIELQF 233

Query: 132 PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKS 190
           PE + AA+  TV  EC A G P P+I+W   +G P    P   + +     + I N ++ 
Sbjct: 234 PETLPAAKGSTVKLECFALGNPVPQINWRRSDGMPF---PTKIKLRKFNGVLEIPNFQQE 290

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKP 248
           DTG+Y C A NS G   K+V    L +   P   +  KD  T    ++   CR  G PKP
Sbjct: 291 DTGSYECIAENSRG---KNVARGRLTYYAKPYWVQLLKDVETAVEDSLYWECRASGKPKP 347

Query: 249 EVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT 308
              W+ N   L       +E G L I ++  +DSG + C A NK G    S  L V    
Sbjct: 348 SYRWLKNGDALVLEERIQIENGALTIANLNVSDSGMFQCIAENKHGLIYSSAELKVLASA 407

Query: 309 -HITDQP--EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
              +  P  +  +V+ G      C   + P   LS  W +G   +    + R    ND  
Sbjct: 408 PDFSRNPMKKMIQVQVGSLVILDCKPSASPR-ALSF-WKKGDTVV--REQARISLLNDGG 463

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVS 422
           L +   ++ D+G YTC A+ +         L V  P   + APSN   + V   +  ++ 
Sbjct: 464 LKIMNVTKADAGIYTCIAENQFGKANGTTQLVVTEPTRIILAPSN---MDVAVGESIILP 520

Query: 423 WNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLA 482
                   L   F  Y   T T+   +GS  E +   G S+   + + +    +   V  
Sbjct: 521 CQVQHDPLLDIMFAWYFNGTLTDFKKDGSHFEKV--GGSSSGDLMIRNIQLKHSGKYVCM 578

Query: 483 FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
                +   S     V   G PG  ++++   +  +   L W +    +  ++ Y +  Q
Sbjct: 579 VQTGVDSVSSAAELIV--RGSPGPPENVKVDEITDTTAQLSWTEGTDSHSPVISYAV--Q 634

Query: 543 SVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------K 595
           +     VG   +  +P   D  T +A +  L P  +Y   +    K G G  S      +
Sbjct: 635 ARTPFSVGWQNVRTVPEAIDGKTRTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVR 694

Query: 596 YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDV 655
                P   P  V G G + + LVI+W  +PE   N   F Y + +R       W Q  V
Sbjct: 695 TEEAAPEVAPSEVSGGGGSRSELVITWDPVPEELQNGGGFGYVVAFRPLGV-TTWIQTVV 753

Query: 656 LDWRQSELVLANQPT--FQPYEIKV 678
                   V  N+    F PYE+KV
Sbjct: 754 TSPDNPRYVFRNESIVPFSPYEVKV 778



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 168/730 (23%), Positives = 276/730 (37%), Gaps = 108/730 (14%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  +   +RI   N   +L I ++  SD G + C   N  G   
Sbjct: 339  CRASGKPKPSYRWLKNGDALVLEERIQIEN--GALTIANLNVSDSGMFQCIAENKHGLIY 396

Query: 115  SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
            S S +L VLA AP F+  P  + I       V  +CK S  P     W      + +   
Sbjct: 397  S-SAELKVLASAPDFSRNPMKKMIQVQVGSLVILDCKPSASPRALSFWKKGDTVVREQAR 455

Query: 172  NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
                  G   + I N+ K+D G Y C A N  G       + V+     I  AP +    
Sbjct: 456  ISLLNDG--GLKIMNVTKADAGIYTCIAENQFGKANGTTQL-VVTEPTRIILAPSNMDVA 512

Query: 232  DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
             G++++L C+V   P  ++   W  N             E  GG      +GDL I ++ 
Sbjct: 513  VGESIILPCQVQHDPLLDIMFAWYFNGTLTDFKKDGSHFEKVGGS----SSGDLMIRNIQ 568

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
               SG+Y C  +  + +   +  L V+        PE+ +V+           ++D + +
Sbjct: 569  LKHSGKYVCMVQTGVDSVSSAAELIVRGSP---GPPENVKVDE----------ITDTTAQ 615

Query: 339  LSIVWLRGSEP----IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
            LS  W  G++     I +  + R   S  +    T    +D    T        ++E + 
Sbjct: 616  LS--WTEGTDSHSPVISYAVQARTPFSVGWQNVRTVPEAIDGKTRTATVVELNPWVEYEF 673

Query: 395  TLTVQ--------------------VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRG- 433
             +                        P  APS  +        + V++W+PV P+ L+  
Sbjct: 674  RVVASNKIGGGEPSLPSEKVRTEEAAPEVAPSEVSGGGG-SRSELVITWDPV-PEELQNG 731

Query: 434  -------HFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
                    FR   V TW +           V + ES        VP S    +V  +N  
Sbjct: 732  GGFGYVVAFRPLGVTTWIQTVVTSPDNPRYVFRNES-------IVPFSPYEVKVGVYNNK 784

Query: 487  YNGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQS 543
              GP S + +  + E  P    S + A  L SS   + W  +  +  NG L+GY+++Y +
Sbjct: 785  GEGPFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVSWNTIPWKSSNGRLLGYEVRYWN 844

Query: 544  VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV--- 600
              G +      ++        TSA L GL+ +  Y   +  Y  AG G  S  +      
Sbjct: 845  NGGEEESSSKVKVA----GNQTSAVLRGLKSNLAYYTAVRAYNTAGAGPFSATVNATTKK 900

Query: 601  --PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDW 658
              P + P NV    +T   ++++W  +  +E+ +    Y++F+R  +     N   VL+ 
Sbjct: 901  TPPSQPPGNVVWN-ATDTKVLLNWEQVKALENESEVTGYKVFYRTSSQ----NNVQVLNT 955

Query: 659  RQ--SELVLANQPTFQPYEIKVVQTWTEKDGEGS----IRELIVNKGESTTTEVDKFVPA 712
             +  +EL+L   P  + Y I+V  T    DG  S    I  +       +T+ +    P 
Sbjct: 956  NKTSAELLL---PIKEDYIIEVKATTDGGDGTSSEQIRIPRITSMDARGSTSAISDIHPV 1012

Query: 713  SKNFARVLAF 722
            S   + +L F
Sbjct: 1013 SGYISVLLFF 1022



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 163/414 (39%), Gaps = 38/414 (9%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFSDQGSY 102
           V   +KK+ L C   G P P   W  +G  I+ S D   + N G  ++I      D GSY
Sbjct: 39  VGSEDKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLNGGNLIVINPNRNWDTGSY 98

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLP----EPEI 157
            C  +N +G   S    L       F       ++  E + V   C   G P    E   
Sbjct: 99  QCFATNSLGTIVSREAKLQFAYLENFKSRMRSRVSVREGQGVVLLC---GPPPHSGELSY 155

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDVYVN 213
            WV N  P S    + RR V      + I  +  SD GNY C  T+++    V       
Sbjct: 156 AWVFNEYP-SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNARVLGSPTPL 214

Query: 214 VL-------AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           VL        + P+I  + P+      G TV L C   G P P++NW  +       +  
Sbjct: 215 VLRSDGVMGEYEPKIELQFPETLPAAKGSTVKLECFALGNPVPQINWRRSDGMPFPTKIK 274

Query: 266 ILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
           + +  G L+I +    D+G Y C A N  G     G LT     +     +D E     S
Sbjct: 275 LRKFNGVLEIPNFQQEDTGSYECIAENSRGKNVARGRLTYYAKPYWVQLLKDVETAVEDS 334

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             + C A   P  K S  WL+  + +  E     +Q  + +LT+   +  DSG + C A+
Sbjct: 335 LYWECRASGKP--KPSYRWLKNGDALVLEER---IQIENGALTIANLNVSDSGMFQCIAE 389

Query: 385 TELDFIEAQATLTVQVPLEAPSNFT------LIQVIDAKKAVVSWNP-VSPQSL 431
            +   I + A L V   L +  +F+      +IQV      ++   P  SP++L
Sbjct: 390 NKHGLIYSSAELKV---LASAPDFSRNPMKKMIQVQVGSLVILDCKPSASPRAL 440



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 125/300 (41%), Gaps = 32/300 (10%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +E++ +T  C+A G P P   W  NG  I  +  +  +  G
Sbjct: 22  LLQGPVFVKEPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLNG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N I I   R  DTG+Y C ATNSLG +         A+        +   +V +G+ VV
Sbjct: 82  GNLIVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKSRMRSRVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        W+ N+     E    R+   ETG L I  V  +D G YTC 
Sbjct: 142 LLC----GPPPHSGELSYAWVFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCV 197

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
             + +  A+  GS   L ++    + +         PE      G +    C A+ +P  
Sbjct: 198 VTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIELQFPETLPAAKGSTVKLECFALGNPVP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +++  W R S+ + F ++ +  + N   L +    + D+G Y C A+       A+  LT
Sbjct: 258 QIN--WRR-SDGMPFPTKIKLRKFNGV-LEIPNFQQEDTGSYECIAENSRGKNVARGRLT 313


>gi|332231546|ref|XP_003264956.1| PREDICTED: contactin-3 [Nomascus leucogenys]
          Length = 1028

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 167/625 (26%), Positives = 268/625 (42%), Gaps = 48/625 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P   S +I    +   L I + +  D GSY 
Sbjct: 239 AAKGSTVKLECFALGNPIPQINWRRSDGLPF--SSKIKLRKFSGVLEIPNFQQEDAGSYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    + +  A E+++ +EC+ASG P+P   W+ +G
Sbjct: 297 CIAENSRGKNVARG-RLTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYRWLKDG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +       R ++    +TI NL  +D+G + C A N  G VY    + V+A AP+ ++
Sbjct: 356 AALVL---EERIQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSK 412

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
            P  +      G  V L C+   +P+   +W      +    R ++L+ G LKI +V  A
Sbjct: 413 NPMKKLVQVQVGSLVSLDCKPRASPRARSSWKKGDVSVQEHERISLLKDGGLKIANVTKA 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L + 
Sbjct: 473 DAGTYTCMAENQFGKASGTTHLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDII 532

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ E    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 533 FTWYFNGALADFKKEGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADL 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
            V+     P N  + ++ D   A +SW       +PV   S++       G++  T    
Sbjct: 593 IVRGSPGPPENVKVDEITDT-TAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT---- 647

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 648 ----TVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S      GS S   + W  V  E  NG   GY + ++ +    V   ++ +    D 
Sbjct: 702 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPL---GVTTWIQTVVTSPDT 758

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y + +  Y   G+G  S    +F     P   P  V     + + 
Sbjct: 759 PRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSE 818

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FW 641
           + +SW  +P    N     Y + +W
Sbjct: 819 IEVSWNTIPWKLSNGHLLGYEVRYW 843



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 155/618 (25%), Positives = 242/618 (39%), Gaps = 48/618 (7%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V  A+       ++           P   V+ PE + AA
Sbjct: 181 LYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 240

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P S      + +     + I N ++ D G+Y C
Sbjct: 241 KGSTVKLECFALGNPIPQINWRRSDGLPFSS---KIKLRKFSGVLEIPNFQQEDAGSYEC 297

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K+V    L +   P   +  KD       ++   CR  G PKP   W+ +
Sbjct: 298 IAENSRG---KNVARGRLTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYRWLKD 354

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
              L       +E G L I++++  DSG + C A NK G    S  L  V      +  P
Sbjct: 355 GAALVLEERIQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNP 414

Query: 315 ED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
                +V+ G   +  C   + P  + S  W +G   +  +   R     D  L +   +
Sbjct: 415 MKKLVQVQVGSLVSLDCKPRASPRARSS--WKKGD--VSVQEHERISLLKDGGLKIANVT 470

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQ 429
           + D+G YTC A+ +         L V  P     APSN   + V   +  ++        
Sbjct: 471 KADAGTYTCMAENQFGKASGTTHLVVTEPTRITLAPSN---MDVSVGESVILPCQVQHDP 527

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
            L   F  Y      +   EGS  E +   G S+   + + +    +   V       + 
Sbjct: 528 LLDIIFTWYFNGALADFKKEGSHFEKV--GGSSSGDLMIRNIQLKHSGKYVCMVQTGVDS 585

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
             S     V   G PG  ++++   +  +   L W + +  +  ++ Y I  Q+     V
Sbjct: 586 VSSAADLIV--RGSPGPPENVKVDEITDTTAQLSWKEGKDNHSPVISYSI--QARTPFSV 641

Query: 550 G-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPF 602
           G   +  +P + D  T +A +  L P  +Y   +    K G G  S      +    VP 
Sbjct: 642 GWQTVTTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
             P  V G G + + LVI+W  +PE   N   F Y + +R       W Q  V       
Sbjct: 702 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGV-TTWIQTVVTSPDTPR 760

Query: 663 LVLANQPT--FQPYEIKV 678
            V  N+    + PYE+KV
Sbjct: 761 YVFRNESIVPYSPYEVKV 778



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 168/727 (23%), Positives = 276/727 (37%), Gaps = 106/727 (14%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W KDG  +   +RI   N   +L I ++  +D G + C   N  G   
Sbjct: 339  CRASGKPKPSYRWLKDGAALVLEERIQIEN--GALTISNLSVTDSGMFQCIAENKHGLVY 396

Query: 115  SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
            S S +L V+A AP F+  P  + +       V+ +CK    P     W      + +   
Sbjct: 397  S-SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSWKKGDVSVQEHER 455

Query: 172  NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
                K G   + I N+ K+D G Y C A N  G      ++ V+     IT AP +    
Sbjct: 456  ISLLKDG--GLKIANVTKADAGTYTCMAENQFGKASGTTHL-VVTEPTRITLAPSNMDVS 512

Query: 232  DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
             G++V+L C+V   P  ++   W  N             E  GG      +GDL I ++ 
Sbjct: 513  VGESVILPCQVQHDPLLDIIFTWYFNGALADFKKEGSHFEKVGGS----SSGDLMIRNIQ 568

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
               SG+Y C  +  + +   +  L V+                G     + + ++D + +
Sbjct: 569  LKHSGKYVCMVQTGVDSVSSAADLIVRG-------------SPGPPENVKVDEITDTTAQ 615

Query: 339  LSIVWLRG----SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD------ 388
            LS  W  G    S  I +  + R   S  +  TVT   E+  G+       EL+      
Sbjct: 616  LS--WKEGKDNHSPVISYSIQARTPFSVGWQ-TVTTVPEVIDGKTHTATVVELNPWVEYE 672

Query: 389  --------------FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
                           + ++   T +   E P +          + V++W+PV  +   G 
Sbjct: 673  FRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGE 732

Query: 435  -------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
                   FR   V TW +           V + ES        VP S    +V  +N   
Sbjct: 733  GFGYVVAFRPLGVTTWIQTVVTSPDTPRYVFRNES-------IVPYSPYEVKVGVYNNKG 785

Query: 488  NGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSV 544
             GP S + +  + E  P    S + A  L SS   + W  +  +  NG L+GY+++Y + 
Sbjct: 786  EGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNG 845

Query: 545  KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
             G +      ++        TSA+L GL+ +  Y   +  Y  AG G  S  +       
Sbjct: 846  GGKEESSSKVKVA----GNETSARLQGLKSNLAYYTAVRAYNSAGSGPFSATVNVTTKKT 901

Query: 601  -PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
             P + P NV    +T   ++++W  +  +E+ +    Y++F+R  +     N   VL+  
Sbjct: 902  PPSQPPGNVVWN-ATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQ----NNVQVLNTN 956

Query: 660  Q--SELVLANQPTFQPYEIKVVQTWTEKDGEGS----IRELIVNKGESTTTEVDKFVPAS 713
            +  +EL+L   P  + Y I+V  T    DG  S    I  +       +T+ +    P S
Sbjct: 957  KTSAELLL---PIKEDYIIEVKATTDGGDGTSSEQIRIPRITSMDARGSTSAISNVHPMS 1013

Query: 714  KNFARVL 720
                 VL
Sbjct: 1014 SYMPMVL 1020



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 148/374 (39%), Gaps = 28/374 (7%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFSDQGSY 102
           V   +KK+ L C   G P P   W  +G  I+ S +   + N G  ++I      D G+Y
Sbjct: 39  VGSEDKKITLNCEARGNPSPHYRWQLNGSDIDMSMEHRYKLNGGNLVVINPNRNWDTGTY 98

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEI 157
            C  +N +G   S    L       F T     ++  E + V   C   G P    E   
Sbjct: 99  QCFATNSLGTIVSREAKLQFAYLENFKTKMRSAVSVREGQGVVLLC---GPPPHSGELSY 155

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDVYVN 213
            W+ N  P S    + RR V      + I  +  SD GNY C  T+ +    V       
Sbjct: 156 AWIFNEYP-SFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPL 214

Query: 214 VL-------AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           VL        + P+I  + P+      G TV L C   G P P++NW  +       +  
Sbjct: 215 VLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIK 274

Query: 266 ILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
           + + +G L+I +    D+G Y C A N  G     G LT     H     +D E+    S
Sbjct: 275 LRKFSGVLEIPNFQQEDAGSYECIAENSRGKNVARGRLTYYAKPHWVQLIKDVEIAVEDS 334

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             + C A   P  K S  WL+    +  E     +Q  + +LT++  S  DSG + C A+
Sbjct: 335 LYWECRASGKP--KPSYRWLKDGAALVLEER---IQIENGALTISNLSVTDSGMFQCIAE 389

Query: 385 TELDFIEAQATLTV 398
            +   + + A L V
Sbjct: 390 NKHGLVYSSAELKV 403



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 125/300 (41%), Gaps = 32/300 (10%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +E++ +T  C+A G P P   W  NG  I  +  +  +  G
Sbjct: 22  LLQGPVFIKEPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDIDMSMEHRYKLNG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N + I   R  DTG Y C ATNSLG +         A+        +   +V +G+ VV
Sbjct: 82  GNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSAVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        WI N+     E    R+   ETG L I+ V  +D G YTC 
Sbjct: 142 LLC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCV 197

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
             + +  A+  GS   L ++    + +         PE      G +    C A+ +P  
Sbjct: 198 VTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +++  W R S+ + F S+ +  + +   L +    + D+G Y C A+       A+  LT
Sbjct: 258 QIN--WRR-SDGLPFSSKIKLRKFSGV-LEIPNFQQEDAGSYECIAENSRGKNVARGRLT 313


>gi|317418925|emb|CBN80963.1| Contactin-4 [Dicentrarchus labrax]
          Length = 1031

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 165/627 (26%), Positives = 258/627 (41%), Gaps = 51/627 (8%)

Query: 47  RNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           +   V+L C   G P+P   W + DG P+    +I+  +    L I +    D G Y C 
Sbjct: 244 KGSSVKLECFALGNPVPSISWRRADGNPLPGKIKINHSS--GVLEIPYFRPEDAGVYECI 301

Query: 106 VSNGVGEAKSYS-IDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
             N  G   +   +    +   ++    +  + A +  + +ECKA G P     W+ NG+
Sbjct: 302 AENSRGRNVARGQLLFHNVEQLHWVQTLKDAHMAIDANLQWECKAIGKPRATYKWLKNGQ 361

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           P++      R  V   R+TI  +   D+G Y C A N  G VY    + V+A  P+ T  
Sbjct: 362 PLTA---EGRIHVEAGRLTISRISLLDSGMYQCVADNEQGAVYASAELKVVASPPDFTRR 418

Query: 225 PKDEYTV--DGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFAD 281
           P  + TV   G  VVL CR   +P+  ++W    + L    R TI+E G L+IT+++ +D
Sbjct: 419 PVKKSTVIQRGGEVVLECRPHASPRATISWWRGGELLKDSKRQTIMEDGTLRITNISKSD 478

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G YTC ARN  GT+  +G+L VKE T I   P   +   GQS    C   SD SL    
Sbjct: 479 GGRYTCVARNHFGTSSSTGTLVVKEPTRIIVPPLSLDATVGQSLVLPCEVSSDSSLSPIF 538

Query: 342 VWLRGSEPIDFESEPRF-VQSNDYS--LTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
            W    + IDF  +  F +    ++  L V       SG+Y C   TE+D + A A L V
Sbjct: 539 KWFFNGKAIDFSRQEHFEMIGGGFAGDLMVRNIQLKHSGKYVCMVHTEVDTVSAAADLIV 598

Query: 399 QVPLEAPSNFTLIQVIDAKKAVVSW----NPVSPQSLRGHFRGYKVQTWTE-KDGEGSIR 453
           + P  AP    +  + D     +SW    +  SP ++      Y VQ  T    G  ++R
Sbjct: 599 RGPPGAPEGLVVTDITDT-TVQLSWGSGPDNHSPVTM------YMVQARTPFSIGWQTVR 651

Query: 454 ELIVN-KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQ-SL 510
            +  +  G+     V    P      RV+A N    G PS     + T   VP     S+
Sbjct: 652 TVPDSVPGQMMHATVKDLNPWVDYEFRVVAINSVGVGEPSTPSKQIRTKAAVPKVAPVSV 711

Query: 511 EAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQS------VKGTKVGPLLERLPYISDP 562
                      + W  V  EQ +G   GY + ++       ++     P   R  Y +D 
Sbjct: 712 SGGGGARGELVIMWEPVPEEQQSGEDFGYVVAFRPLGSSTWIQTVLASPDASRYIYRND- 770

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNN 617
                    + P +++ + +  Y   G+G  S+ +        P + P  V  R  + + 
Sbjct: 771 --------SIAPLSQFEVKVGVYNSVGEGRFSRVVTVFSADEEPSEAPSRVWARAVSASE 822

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FWRR 643
           + + W  +P          Y + FW +
Sbjct: 823 IEVYWEPIPPGSSTEKIIAYEVLFWEK 849



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 149/598 (24%), Positives = 225/598 (37%), Gaps = 78/598 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V N +  A  +S    V+           P   V+ P+ ++ 
Sbjct: 183 NLYIAKVEASDVGNYTCVVRNMMTNATVFSSPTPVVVRRDVVMGEYEPKIEVQFPDTLHV 242

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           ++  +V  EC A G P P I W   +G P+   P   +       + I   R  D G Y 
Sbjct: 243 SKGSSVKLECFALGNPVPSISWRRADGNPL---PGKIKINHSSGVLEIPYFRPEDAGVYE 299

Query: 197 CNATNSLGYVYKDVYV-NVLAHAPE---ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNW 252
           C A NS G   ++V    +L H  E     +  KD +      +   C+  G P+    W
Sbjct: 300 CIAENSRG---RNVARGQLLFHNVEQLHWVQTLKDAHMAIDANLQWECKAIGKPRATYKW 356

Query: 253 IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHIT 311
           + N + LT      +E G L I+ ++  DSG Y C A N+ G    S  L  V      T
Sbjct: 357 LKNGQPLTAEGRIHVEAGRLTISRISLLDSGMYQCVADNEQGAVYASAELKVVASPPDFT 416

Query: 312 DQP--EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
            +P  +   ++ G      C   + P  + +I W RG E +  +   R     D +L +T
Sbjct: 417 RRPVKKSTVIQRGGEVVLECRPHASP--RATISWWRGGELL--KDSKRQTIMEDGTLRIT 472

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---------LEAPSNFTLIQVIDAKKAV 420
             S+ D G+YTC A+       +  TL V+ P         L+A    +L+   +     
Sbjct: 473 NISKSDGGRYTCVARNHFGTSSSTGTLVVKEPTRIIVPPLSLDATVGQSLVLPCEVSSD- 531

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGE---------STTTEVDKFV 471
            S +P+      G    +  Q   E  G G   +L+V   +            TEVD   
Sbjct: 532 SSLSPIFKWFFNGKAIDFSRQEHFEMIGGGFAGDLMVRNIQLKHSGKYVCMVHTEVDTVS 591

Query: 472 PASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPEQP 530
            A+    R         GPP      V  +    TVQ S  + P   S   +  V+   P
Sbjct: 592 AAADLIVR---------GPPGAPEGLVVTDITDTTVQLSWGSGPDNHSPVTMYMVQARTP 642

Query: 531 NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGD 590
                 + I +Q+V+          +P         A +  L P   Y   +      G 
Sbjct: 643 ------FSIGWQTVR---------TVPDSVPGQMMHATVKDLNPWVDYEFRVVAINSVGV 687

Query: 591 GAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G  S      +    VP   P +V G G     LVI W  +PE + +   F Y + +R
Sbjct: 688 GEPSTPSKQIRTKAAVPKVAPVSVSGGGGARGELVIMWEPVPEEQQSGEDFGYVVAFR 745



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 115/287 (40%), Gaps = 38/287 (13%)

Query: 125 APYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P FT EP    F  + +++ V   CKA G P P   W  +G+ I+    +P   +    
Sbjct: 28  GPVFTQEPSDSIFPLSTDDKQVFINCKAKGNPPPHYRWKVDGREINTES-DPNYNLVEGN 86

Query: 182 ITIENLRKSDTGN-YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLT 239
           + I N    + G  Y C ATN+ G V         A     +  P++  +V +G+ VVL 
Sbjct: 87  LLINNPHVINHGGVYQCIATNTFGTVVSREAKVQFAFLQNFSRKPRNTVSVREGQAVVLL 146

Query: 240 CRVFGAPKP-----EVNWIHN-QKELT---GGRYTILETGDLKITDVAFADSGEYTCFAR 290
           C     P P     + +W+ N Q+        R+    TG+L I  V  +D G YTC  R
Sbjct: 147 C----GPPPHYGEIKYSWVFNGQRSFLRQDARRFISQRTGNLYIAKVEASDVGNYTCVVR 202

Query: 291 NKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSLKL 339
           N +  A    S   + V+    + +         P+   V  G S    C A+ +P    
Sbjct: 203 NMMTNATVFSSPTPVVVRRDVVMGEYEPKIEVQFPDTLHVSKGSSVKLECFALGNPV--P 260

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYS--LTVTKSSELDSGQYTCRAQ 384
           SI W R     D    P  ++ N  S  L +      D+G Y C A+
Sbjct: 261 SISWRRA----DGNPLPGKIKINHSSGVLEIPYFRPEDAGVYECIAE 303


>gi|119585939|gb|EAW65535.1| contactin 3 (plasmacytoma associated) [Homo sapiens]
          Length = 901

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 167/625 (26%), Positives = 267/625 (42%), Gaps = 48/625 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P   S +I    +   L I + +  D GSY 
Sbjct: 112 AAKGSTVKLECFALGNPIPQINWRRSDGLPF--SSKIKLRKFSGVLEIPNFQQEDAGSYE 169

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    + +  A E+++ +EC+ASG P+P   W+ NG
Sbjct: 170 CIAENSRGKNVARG-RLTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYRWLKNG 228

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +       R ++    +TI NL  +D+G + C A N  G VY    + V+A AP+ ++
Sbjct: 229 AALVL---EERTQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSK 285

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
            P  +      G  V L C+   +P+   +W      +    R ++L  G LKI +V  A
Sbjct: 286 NPMKKLVQVQVGSLVSLDCKPRASPRALSSWKKGDVSVQEHERISLLNDGGLKIANVTKA 345

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L + 
Sbjct: 346 DAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDII 405

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 406 FTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADL 465

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
            V+     P N  + ++ D   A +SW       +PV   S++       G++  T    
Sbjct: 466 IVRGSPGPPENVKVDEITDT-TAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT---- 520

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 521 ----TVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 574

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S      GS S   + W  V  E  NG   GY + ++ +  T     ++ +    D 
Sbjct: 575 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTT---WIQTVVTSPDT 631

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y + +  Y   G+G  S    +F     P   P  V     + + 
Sbjct: 632 PRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSE 691

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FW 641
           + +SW  +P    N     Y + +W
Sbjct: 692 IEVSWNTIPWKLSNGHLLGYEVRYW 716



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 161/637 (25%), Positives = 246/637 (38%), Gaps = 86/637 (13%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V  A+       ++           P   V+ PE + AA
Sbjct: 54  LYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 113

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P S      + +     + I N ++ D G+Y C
Sbjct: 114 KGSTVKLECFALGNPIPQINWRRSDGLPFSS---KIKLRKFSGVLEIPNFQQEDAGSYEC 170

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K+V    L +   P   +  KD       ++   CR  G PKP   W+ N
Sbjct: 171 IAENSRG---KNVARGRLTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYRWLKN 227

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
              L     T +E G L I++++  DSG + C A NK G    S  L  V      +  P
Sbjct: 228 GAALVLEERTQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNP 287

Query: 315 ED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
                +V+ G   +  C   + P    S  W +G   +  +   R    ND  L +   +
Sbjct: 288 MKKLVQVQVGSLVSLDCKPRASPRALSS--WKKGD--VSVQEHERISLLNDGGLKIANVT 343

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAV-----VSWN 424
           + D+G YTC A+ +         L V  P     APSN      +   ++V     V  +
Sbjct: 344 KADAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSNMD----VSVGESVILPCQVQHD 399

Query: 425 PVSPQSLRGHFRGY-----KVQTWTEKDGEGSIRELIVNKGE---------STTTEVDKF 470
           P+       +F G      K  +  EK G  S  +L++   +            T VD  
Sbjct: 400 PLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSV 459

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
             A+    R                      G PG  ++++   +  +   L W + +  
Sbjct: 460 SSAADLIVR----------------------GSPGPPENVKVDEITDTTAQLSWKEGKDN 497

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           +  ++ Y I  Q+     VG   +  +P + D  T +A +  L P  +Y   +    K G
Sbjct: 498 HSPVISYSI--QARTPFSVGWQTVTTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIG 555

Query: 590 DGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  S      +    VP   P  V G G + + LVI+W  +PE   N   F Y + +R 
Sbjct: 556 GGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRP 615

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
                 W Q  V        V  N+    + PYE+KV
Sbjct: 616 LGV-TTWIQTVVTSPDTPRYVFRNESIVPYSPYEVKV 651



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 166/727 (22%), Positives = 274/727 (37%), Gaps = 106/727 (14%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +   +R    N   +L I ++  +D G + C   N  G   
Sbjct: 212 CRASGKPKPSYRWLKNGAALVLEERTQIEN--GALTISNLSVTDSGMFQCIAENKHGLVY 269

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           S S +L V+A AP F+  P  + +       V+ +CK    P     W      + +   
Sbjct: 270 S-SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRALSSWKKGDVSVQEHER 328

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
                 G   + I N+ K+D G Y C A N  G      ++ V+     IT AP +    
Sbjct: 329 ISLLNDG--GLKIANVTKADAGTYTCMAENQFGKANGTTHL-VVTEPTRITLAPSNMDVS 385

Query: 232 DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
            G++V+L C+V   P  ++   W  N             E  GG      +GDL I ++ 
Sbjct: 386 VGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGS----SSGDLMIRNIQ 441

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
              SG+Y C  +  + +   +  L V+                G     + + ++D + +
Sbjct: 442 LKHSGKYVCMVQTGVDSVSSAADLIVRG-------------SPGPPENVKVDEITDTTAQ 488

Query: 339 LSIVWLRG----SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD------ 388
           LS  W  G    S  I +  + R   S  +  TVT   E+  G+       EL+      
Sbjct: 489 LS--WKEGKDNHSPVISYSIQARTPFSVGWQ-TVTTVPEVIDGKTHTATVVELNPWVEYE 545

Query: 389 --------------FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
                          + ++   T +   E P +          + V++W+PV  +   G 
Sbjct: 546 FRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGE 605

Query: 435 -------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
                  FR   V TW +           V + ES        VP S    +V  +N   
Sbjct: 606 GFGYVVAFRPLGVTTWIQTVVTSPDTPRYVFRNES-------IVPYSPYEVKVGVYNNKG 658

Query: 488 NGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSV 544
            GP S + +  + E  P    S + A  L SS   + W  +  +  NG L+GY+++Y + 
Sbjct: 659 EGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNG 718

Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
            G +      ++        TSA+L GL+ +  Y   +  Y  AG G  S  +       
Sbjct: 719 GGKEESSSKMKVA----GNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSATVNVTTKKT 774

Query: 601 -PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
            P + P NV    +T   ++++W  +  +E+ +    Y++F+R  +     N   VL+  
Sbjct: 775 PPSQPPGNVVWN-ATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQ----NNVQVLNTN 829

Query: 660 Q--SELVLANQPTFQPYEIKVVQTWTEKDGEGS----IRELIVNKGESTTTEVDKFVPAS 713
           +  +ELVL   P  + Y I+V  T    DG  S    I  +       +T+ +    P S
Sbjct: 830 KTSAELVL---PIKEDYIIEVKATTDGGDGTSSEQIRIPRITSMDARGSTSAISNVHPMS 886

Query: 714 KNFARVL 720
                VL
Sbjct: 887 SYMPIVL 893



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 28/186 (15%)

Query: 232 DGKTVVLTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADS 282
           +G+ VVL C     P P        WI N+     E    R+   ETG L I+ V  +D 
Sbjct: 9   EGQGVVLLC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDV 64

Query: 283 GEYTCFARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNA 331
           G YTC   + +  A+  GS   L ++    + +         PE      G +    C A
Sbjct: 65  GNYTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFA 124

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           + +P  +++  W R S+ + F S+ +  + +   L +    + D+G Y C A+       
Sbjct: 125 LGNPIPQIN--WRR-SDGLPFSSKIKLRKFSGV-LEIPNFQQEDAGSYECIAENSRGKNV 180

Query: 392 AQATLT 397
           A+  LT
Sbjct: 181 ARGRLT 186


>gi|426249263|ref|XP_004018369.1| PREDICTED: contactin-6 isoform 2 [Ovis aries]
          Length = 956

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 183/716 (25%), Positives = 309/716 (43%), Gaps = 78/716 (10%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    + S+     +L I + +  D+G Y 
Sbjct: 167 AAKDSSVKLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQ--ATLEIPNFQQEDEGFYE 224

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C  SN  G   +    L   A P +  + +    +  +++ +ECKASG P+P   W+ NG
Sbjct: 225 CIASNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDSLFWECKASGKPDPWYTWLKNG 283

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++   P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 284 ERLN---PEERIQIENGTLIITMLNVSDSGIYQCAAENKYQIIYANAELRVLASAPDFSK 340

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
            P  +Y+V   G  +V+ C+    P+  ++W    + L    R  +LE G LKI +V  +
Sbjct: 341 NPLKKYSVVQVGGDIVIECKPNAFPRATISWKRGIESLRQSKRVFLLEDGSLKIYNVTRS 400

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A+ +GSL +KE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 401 DAGVYTCIATNQFGVAKNTGSLIIKERTVITVPPSKMDVTVGESIVLPCQVSHDPSIEVV 460

Query: 341 IVWLRGSEPIDFE---SEPRFVQSNDYSLTVTKSSELD-SGQYTCRAQTELDFIEAQATL 396
            VW    + IDF+   +    +  +     + ++ +L+ SG+Y C  +T L+ + A   +
Sbjct: 461 FVWSFNGDVIDFKKGVAHFERIGGDSVGDLMIRNIQLNHSGKYLCTVKTTLESLSADGDI 520

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-----WTEKDGEGS 451
            V+ P   P +  +   I +    +SW P S  +        + +T     W       +
Sbjct: 521 IVRGPPGPPEDVRVTH-ISSASCQLSWRPGSDNNSPIQIFSIQARTPFSVGW---QAVST 576

Query: 452 IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSL 510
           + E++   G++    V    P  +   RV+A N    G PS+    + T   VP    + 
Sbjct: 577 VPEIL--NGKTFNATVVALNPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPTN 634

Query: 511 EAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSA 567
                GS S   + W  +  E  NG   GY +  + V  T      ER+P + + +    
Sbjct: 635 INGGGGSRSELIITWESIPEELQNGEDFGYIVMLRPVGSTTWTK--ERVPSV-ESSRFIY 691

Query: 568 KLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS-----TPNNLVISW 622
           +   + P + + + +  Y K G+G  S        ++   +  RG+     + + + +SW
Sbjct: 692 RNENIIPLSPFEVKVGVYNKEGEGPLSTASIIYSGEDEPQLAPRGTSVQSFSASEMEVSW 751

Query: 623 TAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTW 682
            A+                       AWN       R +  VL        YE   V  W
Sbjct: 752 NAI-----------------------AWN-------RNTGRVLG-------YE---VLYW 771

Query: 683 TEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           T+   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S  ++  T
Sbjct: 772 TDDSKESMIGKIRVS-GNITTKNITGLKANTVYFASVRAYNTAGTGPSSPPVNVTT 826



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 153/643 (23%), Positives = 247/643 (38%), Gaps = 72/643 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC ++N   + +       ++           P   V  PE I A
Sbjct: 108 NLYIAKVEPSDVGNYTCLITNKEAQRRVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQA 167

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A++ +V  EC A G P P+I W   +G P+   P   +       + I N ++ D G Y 
Sbjct: 168 AKDSSVKLECFALGNPVPDISWRRLDGSPL---PGKVKYSKSQATLEIPNFQQEDEGFYE 224

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A+N  G       + +    PE  +  ++ Y     ++   C+  G P P   W+ N 
Sbjct: 225 CIASNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDSLFWECKASGKPDPWYTWLKNG 283

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQP- 314
           + L       +E G L IT +  +DSG Y C A NK      +  L V       +  P 
Sbjct: 284 ERLNPEERIQIENGTLIITMLNVSDSGIYQCAAENKYQIIYANAELRVLASAPDFSKNPL 343

Query: 315 EDYE-VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           + Y  V+ G      C   + P  + +I W RG E        R     D SL +   + 
Sbjct: 344 KKYSVVQVGGDIVIECKPNAFP--RATISWKRGIE--SLRQSKRVFLLEDGSLKIYNVTR 399

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV-----------VS 422
            D+G YTC A  +    +   +L ++         T+I V  +K  V           VS
Sbjct: 400 SDAGVYTCIATNQFGVAKNTGSLIIK-------ERTVITVPPSKMDVTVGESIVLPCQVS 452

Query: 423 WNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 477
            +P         F G  +         E+ G  S+ +L++   +       K++   K  
Sbjct: 453 HDPSIEVVFVWSFNGDVIDFKKGVAHFERIGGDSVGDLMIRNIQ--LNHSGKYLCTVKTT 510

Query: 478 ARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
              L+ +G            +   G PG  + +    + S++  L W      N  +  +
Sbjct: 511 LESLSADGD-----------IIVRGPPGPPEDVRVTHISSASCQLSWRPGSDNNSPIQIF 559

Query: 538 KIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK- 595
            I  Q+     VG   +  +P I +  T +A +  L P  +Y   +      G G  SK 
Sbjct: 560 SI--QARTPFSVGWQAVSTVPEILNGKTFNATVVALNPWVEYEFRVVAGNSIGIGEPSKP 617

Query: 596 -----YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
                    VP   P N+ G G + + L+I+W ++PE   N   F Y +  R   +   W
Sbjct: 618 SELLRTKASVPAVAPTNINGGGGSRSELIITWESIPEELQNGEDFGYIVMLRPVGS-TTW 676

Query: 651 NQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSI 691
            ++ V     S  +  N+      P+E+KV      K+GEG +
Sbjct: 677 TKERVPSVESSRFIYRNENIIPLSPFEVKV--GVYNKEGEGPL 717



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 149/638 (23%), Positives = 245/638 (38%), Gaps = 79/638 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +NP +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 267 CKASGKPDPWYTWLKNGERLNPEERIQIEN--GTLIITMLNVSDSGIYQCAAENKY-QII 323

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
             + +L VLA AP F+  P  ++        +  ECK +  P   I W    + + Q+  
Sbjct: 324 YANAELRVLASAPDFSKNPLKKYSVVQVGGDIVIECKPNAFPRATISWKRGIESLRQSKR 383

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
               + G   + I N+ +SD G Y C ATN  G V K+    ++     IT  P      
Sbjct: 384 VFLLEDG--SLKIYNVTRSDAGVYTCIATNQFG-VAKNTGSLIIKERTVITVPPSKMDVT 440

Query: 232 DGKTVVLTCRVFGAPKPEVN--WIHN-----------QKELTGGRYTILETGDLKITDVA 278
            G+++VL C+V   P  EV   W  N             E  GG       GDL I ++ 
Sbjct: 441 VGESIVLPCQVSHDPSIEVVFVWSFNGDVIDFKKGVAHFERIGGD----SVGDLMIRNIQ 496

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSDPS 336
              SG+Y C  +  L +    G + V+        PED  V    SA+ + +    SD +
Sbjct: 497 LNHSGKYLCTVKTTLESLSADGDIIVRGPP---GPPEDVRVTHISSASCQLSWRPGSDNN 553

Query: 337 LKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
             + I  ++   P         + P  +    ++ TV   +     ++   A   +   E
Sbjct: 554 SPIQIFSIQARTPFSVGWQAVSTVPEILNGKTFNATVVALNPWVEYEFRVVAGNSIGIGE 613

Query: 392 AQA-----TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ----- 441
                        VP  AP+N          + +++W  +  +   G   GY V      
Sbjct: 614 PSKPSELLRTKASVPAVAPTNINGGGG-SRSELIITWESIPEELQNGEDFGYIVMLRPVG 672

Query: 442 --TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
             TWT++          + + E+        +P S    +V  +N    GP S      +
Sbjct: 673 STTWTKERVPSVESSRFIYRNEN-------IIPLSPFEVKVGVYNKEGEGPLSTASIIYS 725

Query: 500 PEGVP------GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKVGP 551
            E  P       +VQS  A  +  S   + W    +  G ++GY++ Y     K + +G 
Sbjct: 726 GEDEPQLAPRGTSVQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDSKESMIGK 782

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPD 606
           +      +S   TT   + GL+ +T Y   +  Y  AG G  S  +        P + P 
Sbjct: 783 I-----RVSGNITTK-NITGLKANTVYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPA 836

Query: 607 NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           N+  +  T + L ++W  +  +E+ +    Y+I +R++
Sbjct: 837 NIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQN 873



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 14/190 (7%)

Query: 409 TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
           T +Q   A +  VSWN ++     G   GY+V  WT+   E  I ++ V+ G  TT  + 
Sbjct: 737 TSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVS-GNITTKNIT 795

Query: 469 KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VK 526
                +  FA V A+N A  GP S  ++  T +  P    +  A  L +S   L W  VK
Sbjct: 796 GLKANTVYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLTNSKLCLNWEHVK 855

Query: 527 PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGY 585
             +    ++GYKI Y+  + +K         +I +   TSA+L  L P    Y I +   
Sbjct: 856 TMENESEVLGYKILYRQNRHSKT--------HILETNNTSAEL--LVPFEEDYLIEIRTV 905

Query: 586 TKAGDGAESK 595
           +  GDG+ S+
Sbjct: 906 SDGGDGSSSE 915



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 82/214 (38%), Gaps = 29/214 (13%)

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPE 249
           D G Y C ATNSLG +         A+  +     +   +V +G+ VVL C     P P 
Sbjct: 22  DIGTYQCLATNSLGTILSQKAKLQFAYIEDFETKTRSTVSVREGQGVVLLC----GPPPH 77

Query: 250 VN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGT--AQG 298
                  WI N   L       R+   ETG+L I  V  +D G YTC   NK      QG
Sbjct: 78  FGDLSYAWIFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCLITNKEAQRRVQG 137

Query: 299 SGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEP 349
             +  V+    +  +         PE  +     S    C A+ +P   +S   L GS  
Sbjct: 138 PPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSP- 196

Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
                + ++ +S   +L +    + D G Y C A
Sbjct: 197 --LPGKVKYSKSQA-TLEIPNFQQEDEGFYECIA 227


>gi|119584280|gb|EAW63876.1| contactin 4, isoform CRA_d [Homo sapiens]
          Length = 699

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/388 (31%), Positives = 182/388 (46%), Gaps = 24/388 (6%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P  IW + DG PI    R  + N    L I + +  D G Y C   N 
Sbjct: 243 VKLECFALGNPVPTIIWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGLYECVAENS 300

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P +  +   I+ A EE V +ECKA+G P+P   W+ NG+P+   
Sbjct: 301 RGKNVARG-QLTFYAQPNWIQKINDIHVAMEENVFWECKANGRPKPTYKWLKNGEPLLT- 358

Query: 170 PPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
               R ++    G   ITI NL  SD G Y C A N  G ++ +  ++V+A  P+ +   
Sbjct: 359 ----RDRIQIEQGTLNITIVNL--SDAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTL 412

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADS 282
               T+   G  VV+ C+   +PKP   W   +  L    R TI E G+L+I +V  +D+
Sbjct: 413 LKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDA 472

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   
Sbjct: 473 GSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFT 532

Query: 343 WLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           W      IDF+ +         Q +   L +       +G+Y C  QT +D + A A L 
Sbjct: 533 WSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLI 592

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           V+ P   P   T+ ++ D   A +SW P
Sbjct: 593 VRGPPGPPEAVTIDEITDT-TAQLSWRP 619



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 137/333 (41%), Gaps = 32/333 (9%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V+ PE +  
Sbjct: 178 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPT 237

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   +GKPI++     RR      + I N ++ D G Y 
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIAR---KARRHKSNGILEIPNFQQEDAGLYE 294

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P   +   D +    + V   C+  G PKP   W+ N 
Sbjct: 295 CVAENSRGKNVARGQLTFYAQ-PNWIQKINDIHVAMEENVFWECKANGRPKPTYKWLKNG 353

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           + L       +E G L IT V  +D+G Y C A NK G    +  L+V     I   P+ 
Sbjct: 354 EPLLTRDRIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSV-----IAVGPDF 408

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  K    W +G + I  E+E R   S D +L +
Sbjct: 409 SRTLLKRVTLVKVGGEVVIECKPKASP--KPVYTWKKGRD-ILKENE-RITISEDGNLRI 464

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
              ++ D+G YTC A        +   L V+ P
Sbjct: 465 INVTKSDAGSYTCIATNHFGTASSTGNLVVKDP 497



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 143/369 (38%), Gaps = 30/369 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  ++            SL+I +  +  D G+Y C  +
Sbjct: 44  KKVKLNCEVKGNPKPHIRWKLNGTDVDTGMDFRYSVVEGSLLINNPNKTQDAGTYQCTAT 103

Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVHN 162
           N  G   S    L       F T     ++    + +   C   G P    E    W+ N
Sbjct: 104 NSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMVLLC---GPPPHSGELSYAWIFN 160

Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN- 213
             P  Q   + RR V      + I  + KSD GNY C  TN+      LG     +  N 
Sbjct: 161 EYPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRND 217

Query: 214 --VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILET 269
             +  + P+I  + P+   T  G TV L C   G P P + W   + K +          
Sbjct: 218 GVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHKSN 277

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I +    D+G Y C A N  G     G LT     +   +  D  V   ++  + C
Sbjct: 278 GILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAMEENVFWEC 337

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   P  K +  WL+  EP+        +Q    +L +T  +  D+G Y C A+ +   
Sbjct: 338 KANGRP--KPTYKWLKNGEPLLTRDR---IQIEQGTLNITIVNLSDAGMYQCLAENKHGV 392

Query: 390 IEAQATLTV 398
           I + A L+V
Sbjct: 393 IFSNAELSV 401



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 117/303 (38%), Gaps = 34/303 (11%)

Query: 119 DLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D S L  P F  EP    F   +EE+ V   C+  G P+P I W  NG  +     + R 
Sbjct: 19  DDSTLHGPIFIQEPSPVMFPLDSEEKKVKLNCEVKGNPKPHIRWKLNGTDVDTG-MDFRY 77

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            V    + I N  K+ D G Y C ATNS G +         A+        +   +V  G
Sbjct: 78  SVVEGSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRG 137

Query: 234 KTVVLTCRVFGAPKPEVN-----WIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYT 286
           + +VL C     P P        WI N+        R+   ETG+L I  V  +D G YT
Sbjct: 138 QGMVLLC----GPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYT 193

Query: 287 CFARNK------LG-----TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           C   N       LG       +  G +   E       PE      G +    C A+ +P
Sbjct: 194 CVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNP 253

Query: 336 SLKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
               +I+W R   +PI    + R  +SN   L +    + D+G Y C A+       A+ 
Sbjct: 254 V--PTIIWRRADGKPI--ARKARRHKSNGI-LEIPNFQQEDAGLYECVAENSRGKNVARG 308

Query: 395 TLT 397
            LT
Sbjct: 309 QLT 311


>gi|410036468|ref|XP_003950069.1| PREDICTED: contactin-4 [Pan troglodytes]
          Length = 807

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 190/727 (26%), Positives = 294/727 (40%), Gaps = 112/727 (15%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P  IW + DG PI    R  + N    L I + +  D G Y C   N 
Sbjct: 24  VKLECFALGNPVPTIIWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGLYECVAENS 81

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P +  +   I+ A EE V +ECKA+G P+P   W+ NG+P+   
Sbjct: 82  RGKNVARG-QLTFYAQPNWIQKINDIHVAMEENVFWECKANGRPKPTYRWLKNGEPLLT- 139

Query: 170 PPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
               R ++    G   ITI NL  SD G Y C A N  G ++ +  ++V+A  P+ +   
Sbjct: 140 ----RDRIQIEQGTLNITIVNL--SDAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTL 193

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADS 282
               T+   G  V + C+   +PKP   W   +  +    R TI E G+L+I +V  +D+
Sbjct: 194 LKRVTLVKVGGEVAIECKPKASPKPVYTWKKGRDIVKENERITISEDGNLRIINVTKSDA 253

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   
Sbjct: 254 GSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFT 313

Query: 343 WLRGSEPIDFES-----EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           W      IDF+      E    Q +   L +       +G+Y C  QT +D + A A L 
Sbjct: 314 WSFNGHLIDFDRDGDPYERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLI 373

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGE 449
           V+ P   P   T+ ++ D   A +SW P     SP ++      Y +Q  T         
Sbjct: 374 VRGPPGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFSVGWQAV 426

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTP 500
            ++ ELI   G++ T  V    P  +   R +A N    G PS         E +  VTP
Sbjct: 427 STVPELI--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTP 484

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
             V G   S        S   + W  V  E  NG   GY + ++       G ++  L  
Sbjct: 485 ANVSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFR-----PYGKMIWMLTV 532

Query: 559 I--SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGR 611
           +  +D +    +   + P + + + +  +   G+G  S           P K P ++  R
Sbjct: 533 LASADASRYVFRNESVHPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFAR 592

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
             +  ++ + W +  E                                       N+   
Sbjct: 593 SLSATDIEVFWASPLE--------------------------------------KNRGRI 614

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
           Q YE+K    W  +D E + R+ I   G  T+T++     +      V A+N A  GP S
Sbjct: 615 QGYEVKY---WRHEDKEENARK-IRTVGNQTSTKITNLKGSVLYHLAVKAYNSAGTGPSS 670

Query: 732 EIISFVT 738
             ++  T
Sbjct: 671 ATVNVTT 677



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 144/584 (24%), Positives = 218/584 (37%), Gaps = 75/584 (12%)

Query: 132 PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKS 190
           PE +  A+  TV  EC A G P P I W   +GKPI++     RR      + I N ++ 
Sbjct: 13  PETVPTAKGATVKLECFALGNPVPTIIWRRADGKPIAR---KARRHKSNGILEIPNFQQE 69

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A NS G       +   A  P   +   D +    + V   C+  G PKP  
Sbjct: 70  DAGLYECVAENSRGKNVARGQLTFYAQ-PNWIQKINDIHVAMEENVFWECKANGRPKPTY 128

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N + L       +E G L IT V  +D+G Y C A NK G    +  L+V     I
Sbjct: 129 RWLKNGEPLLTRDRIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSV-----I 183

Query: 311 TDQPEDYE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
              P+           V+ G      C   + P  K    W +G + +  E+E R   S 
Sbjct: 184 AVGPDFSRTLLKRVTLVKVGGEVAIECKPKASP--KPVYTWKKGRDIVK-ENE-RITISE 239

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV- 421
           D +L +   ++ D+G YTC A        +   L V+ P       + + V   +  V+ 
Sbjct: 240 DGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLP 299

Query: 422 -------SWNPVSPQSLRGHFRGYKV--QTWTEKDGEGSIRELIVNKGE---------ST 463
                  S + V   S  GH   +      +    G+ S  +L++   +           
Sbjct: 300 CQVTHDHSLDIVFTWSFNGHLIDFDRDGDPYERVGGQDSAGDLMIRNIQLKHAGKYVCMV 359

Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYL 522
            T VD+   A+    R         GPP    +    E    T Q S    P   S   +
Sbjct: 360 QTSVDRLSAAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITM 410

Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
             ++   P      + + +Q+V           +P + D  T +A + GL P  +Y    
Sbjct: 411 YVIQARTP------FSVGWQAVS---------TVPELIDGKTFTATVVGLNPWVEYEFRT 455

Query: 583 AGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
                 G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F 
Sbjct: 456 VAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFG 515

Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
           Y + +R +     W    +     S  V  N+    F P+E+KV
Sbjct: 516 YVVAFRPYGK-MIWMLTVLASADASRYVFRNESVHPFSPFEVKV 558



 Score = 41.2 bits (95), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 21/192 (10%)

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
           RG  +GY+V+ W  +D E + R+ I   G  T+T++     +      V A+N A  GP 
Sbjct: 611 RGRIQGYEVKYWRHEDKEENARK-IRTVGNQTSTKITNLKGSVLYHLAVKAYNSAGTGPS 669

Query: 492 SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
           S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 670 SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNR 725

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
            +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P  + 
Sbjct: 726 QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIPKISN 775

Query: 606 DNVEGRGSTPNN 617
               G G++ +N
Sbjct: 776 AYARGSGASTSN 787


>gi|395824772|ref|XP_003785629.1| PREDICTED: LOW QUALITY PROTEIN: contactin-3-like [Otolemur garnettii]
          Length = 1470

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 171/629 (27%), Positives = 271/629 (43%), Gaps = 56/629 (8%)

Query: 45   ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
            A +   V+L C   G P+PQ  W + DG+P   S +I    +   L I + +  D GSY 
Sbjct: 681  AAKGSTVKLECFALGNPIPQINWRRSDGLPF--SSKIKLRKFNGVLEIPNFQQEDAGSYE 738

Query: 104  CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
            C   N  G+  +    L+  A P++    + +  A E+ + +EC+ASG P+P   W+ NG
Sbjct: 739  CIAENSRGKNVARG-RLTYYAKPHWVQLIKDVEIAVEDNLYWECRASGKPKPSYRWLKNG 797

Query: 164  KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            + +       R ++    +TI NL  SD+G + C A N  G VY    + V+A AP+ ++
Sbjct: 798  EALVL---EERIQIENGALTISNLNVSDSGMFQCIAENKHGLVYSSAELKVVASAPDFSK 854

Query: 224  APKDEYTVD--GKTVVLTCRVFGAPKPEVNW-----IHNQKELTGGRYTILETGDLKITD 276
             P  +      G  V L C+   +P+ +  W     I  ++E    R + L+ G LKI +
Sbjct: 855  NPMKKLVQAQVGSLVSLDCKPRASPRAQSFWKKGEVIVQEQE----RISFLKDGGLKIAN 910

Query: 277  VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
            V  AD+G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP 
Sbjct: 911  VTKADAGTYTCTAENQFGKANGTTHLVVTEPTKITLAPSNMDVSVGESVILPCQVQHDPL 970

Query: 337  LKLSIVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
            L +   W       DF+ E    +    S+   L +       SG+Y C  QT +D + +
Sbjct: 971  LDIMFTWYFNGALADFKKEGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSS 1030

Query: 393  QATLTVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQT 442
             A L V+     P N  + ++ D   A +SW       +PV   S++       G++  T
Sbjct: 1031 AADLIVRGSPGPPENVKVDEITDT-TAQLSWKEGTDNHSPVLSYSIQARTPFSVGWQTVT 1089

Query: 443  WTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPE 501
                    ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E
Sbjct: 1090 --------TVPEVI--DGKTHTATVVELNPWVEYEFRVVANNKIGGGEPSLPSEKVRTEE 1139

Query: 502  GVPGTVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
             VP    S      GS S   + W  V  E  NG  +GY + ++ +    V   ++ +  
Sbjct: 1140 AVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEGLGYVVAFRPL---GVTTWIQTVVT 1196

Query: 559  ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGS 613
              D      +   + P + Y + +  Y   G+G  S    +F     P   P  V     
Sbjct: 1197 SPDTPRYVFRNESIMPFSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVFANSL 1256

Query: 614  TPNNLVISWTAMPEIEHNAPHFKYRI-FW 641
            + + + +SW  +P    N     Y + +W
Sbjct: 1257 SSSEIEVSWNTIPWKLSNGHLLGYEVRYW 1285



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 156/618 (25%), Positives = 242/618 (39%), Gaps = 48/618 (7%)

Query: 89   LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
            L I  VE SD G+YTC V++ V  A+       ++           P   V+ PE + AA
Sbjct: 623  LYISKVEPSDVGNYTCVVTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 682

Query: 139  EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
            +  TV  EC A G P P+I+W   +G P S      + +     + I N ++ D G+Y C
Sbjct: 683  KGSTVKLECFALGNPIPQINWRRSDGLPFSS---KIKLRKFNGVLEIPNFQQEDAGSYEC 739

Query: 198  NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
             A NS G   K+V    L +   P   +  KD        +   CR  G PKP   W+ N
Sbjct: 740  IAENSRG---KNVARGRLTYYAKPHWVQLIKDVEIAVEDNLYWECRASGKPKPSYRWLKN 796

Query: 256  QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
             + L       +E G L I+++  +DSG + C A NK G    S  L  V      +  P
Sbjct: 797  GEALVLEERIQIENGALTISNLNVSDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNP 856

Query: 315  EDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
                V+A  G   +  C   + P  +    W +G   +  +    F++  D  L +   +
Sbjct: 857  MKKLVQAQVGSLVSLDCKPRASP--RAQSFWKKGEVIVQEQERISFLK--DGGLKIANVT 912

Query: 373  ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQ 429
            + D+G YTC A+ +         L V  P +   APSN   + V   +  ++        
Sbjct: 913  KADAGTYTCTAENQFGKANGTTHLVVTEPTKITLAPSN---MDVSVGESVILPCQVQHDP 969

Query: 430  SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
             L   F  Y      +   EGS  E +   G S+   + + +    +   V       + 
Sbjct: 970  LLDIMFTWYFNGALADFKKEGSHFEKV--GGSSSGDLMIRNIQLKHSGKYVCMVQTGVDS 1027

Query: 490  PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
              S     V   G PG  ++++   +  +   L W +    +  ++ Y I  Q+     V
Sbjct: 1028 VSSAADLIV--RGSPGPPENVKVDEITDTTAQLSWKEGTDNHSPVLSYSI--QARTPFSV 1083

Query: 550  G-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPF 602
            G   +  +P + D  T +A +  L P  +Y   +    K G G  S      +    VP 
Sbjct: 1084 GWQTVTTVPEVIDGKTHTATVVELNPWVEYEFRVVANNKIGGGEPSLPSEKVRTEEAVPE 1143

Query: 603  KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
              P  V G G + + LVI+W  +PE   N     Y + +R       W Q  V       
Sbjct: 1144 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGLGYVVAFRPLGV-TTWIQTVVTSPDTPR 1202

Query: 663  LVLANQPT--FQPYEIKV 678
             V  N+    F PYE+KV
Sbjct: 1203 YVFRNESIMPFSPYEVKV 1220



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 170/730 (23%), Positives = 283/730 (38%), Gaps = 108/730 (14%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  +   +RI   N   +L I ++  SD G + C   N  G   
Sbjct: 781  CRASGKPKPSYRWLKNGEALVLEERIQIEN--GALTISNLNVSDSGMFQCIAENKHGLVY 838

Query: 115  SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
            S S +L V+A AP F+  P  + + A     V+ +CK    P  +  W      + +   
Sbjct: 839  S-SAELKVVASAPDFSKNPMKKLVQAQVGSLVSLDCKPRASPRAQSFWKKGEVIVQEQER 897

Query: 172  NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
                K G   + I N+ K+D G Y C A N  G      ++ V+    +IT AP +    
Sbjct: 898  ISFLKDG--GLKIANVTKADAGTYTCTAENQFGKANGTTHL-VVTEPTKITLAPSNMDVS 954

Query: 232  DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
             G++V+L C+V   P  ++   W  N             E  GG      +GDL I ++ 
Sbjct: 955  VGESVILPCQVQHDPLLDIMFTWYFNGALADFKKEGSHFEKVGGS----SSGDLMIRNIQ 1010

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
               SG+Y C  +  + +   +  L V+        PE+ +V+           ++D + +
Sbjct: 1011 LKHSGKYVCMVQTGVDSVSSAADLIVRGSP---GPPENVKVDE----------ITDTTAQ 1057

Query: 339  LSIVWLRGSE----PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD------ 388
            LS  W  G++     + +  + R   S  +  TVT   E+  G+       EL+      
Sbjct: 1058 LS--WKEGTDNHSPVLSYSIQARTPFSVGWQ-TVTTVPEVIDGKTHTATVVELNPWVEYE 1114

Query: 389  --------------FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
                           + ++   T +   E P +          + V++W+PV  +   G 
Sbjct: 1115 FRVVANNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGE 1174

Query: 435  -------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
                   FR   V TW +           V + ES        +P S    +V  +N   
Sbjct: 1175 GLGYVVAFRPLGVTTWIQTVVTSPDTPRYVFRNES-------IMPFSPYEVKVGVYNNKG 1227

Query: 488  NGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSV 544
             GP S + +  + E  P    S + A  L SS   + W  +  +  NG L+GY+++Y + 
Sbjct: 1228 EGPFSPVTTVFSAEEEPTVAPSQVFANSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNS 1287

Query: 545  KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
             G +      R+        TSA+L GL+ +  Y   +  Y  AG G  S  +       
Sbjct: 1288 GGREESSSKVRVA----GNETSARLRGLKSNLAYYTAVRAYNSAGPGPFSATVNATTKKT 1343

Query: 601  -PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR---RHNTGEAWNQDDVL 656
             P + P NV    +T   ++++W  +  +E+ +    Y++F+R   +HN      Q    
Sbjct: 1344 PPSQPPGNVVWN-ATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQHNV-----QVLST 1397

Query: 657  DWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGS----IRELIVNKGESTTTEVDKFVPA 712
            +   +EL+L   P  + Y I+V  T    DG  S    I  +       +T+ +    P 
Sbjct: 1398 NKTSAELLL---PVKEDYIIEVKATTDGGDGTSSEQIRIPRITNMDARGSTSAISNVHPM 1454

Query: 713  SKNFARVLAF 722
            S     VL F
Sbjct: 1455 SSYMPIVLFF 1464



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 150/374 (40%), Gaps = 28/374 (7%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFSDQGSY 102
           V   +KK+ L C   G+P P   W  +G  I+ S +   + N G  ++I      D GSY
Sbjct: 481 VGSEDKKITLNCEARGSPSPHYRWQLNGSDIDMSLEHRYKLNGGNLVVINPNRNRDTGSY 540

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEI 157
            C  +N +G   S    L       F T     ++  E + V   C   G P    E   
Sbjct: 541 QCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLC---GPPPHSGELSY 597

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDVYVN 213
            W+ N  P S    + RR V      + I  +  SD GNY C  T+++    V       
Sbjct: 598 AWIFNEYP-SFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSTVTNARVLGSPTPL 656

Query: 214 VL-------AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           VL        + P+I  + P+      G TV L C   G P P++NW  +       +  
Sbjct: 657 VLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIK 716

Query: 266 ILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
           + +  G L+I +    D+G Y C A N  G     G LT     H     +D E+    +
Sbjct: 717 LRKFNGVLEIPNFQQEDAGSYECIAENSRGKNVARGRLTYYAKPHWVQLIKDVEIAVEDN 776

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             + C A   P  K S  WL+  E +  E     +Q  + +LT++  +  DSG + C A+
Sbjct: 777 LYWECRASGKP--KPSYRWLKNGEALVLEER---IQIENGALTISNLNVSDSGMFQCIAE 831

Query: 385 TELDFIEAQATLTV 398
            +   + + A L V
Sbjct: 832 NKHGLVYSSAELKV 845



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 125/299 (41%), Gaps = 32/299 (10%)

Query: 123 LAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGP 179
           L  P F  EP    F   +E++ +T  C+A G P P   W  NG  I  +  +  +  G 
Sbjct: 465 LQGPVFIKEPSNSIFSVGSEDKKITLNCEARGSPSPHYRWQLNGSDIDMSLEHRYKLNGG 524

Query: 180 NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVL 238
           N + I   R  DTG+Y C ATNSLG +         A+        +   +V +G+ VVL
Sbjct: 525 NLVVINPNRNRDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVL 584

Query: 239 TCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCFA 289
            C     P P        WI N+     E    R+   ETG L I+ V  +D G YTC  
Sbjct: 585 LC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVV 640

Query: 290 RNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSLK 338
            + +  A+  GS   L ++    + +         PE      G +    C A+ +P  +
Sbjct: 641 TSTVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQ 700

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           ++  W R S+ + F S+ +  + N   L +    + D+G Y C A+       A+  LT
Sbjct: 701 IN--WRR-SDGLPFSSKIKLRKFNGV-LEIPNFQQEDAGSYECIAENSRGKNVARGRLT 755


>gi|426341233|ref|XP_004035953.1| PREDICTED: contactin-3 [Gorilla gorilla gorilla]
          Length = 1028

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 167/625 (26%), Positives = 267/625 (42%), Gaps = 48/625 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P   S +I    +   L I + +  D GSY 
Sbjct: 239 AAKGSTVKLECFALGNPIPQINWRRSDGLPF--SSKIKLRKFSGVLEIPNFQQEDAGSYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    + +  A E+++ +EC+ASG P+P   W+ NG
Sbjct: 297 CIAENSRGKNVARG-RLTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYRWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +       R ++    +TI NL  +D+G + C A N  G VY    + V+A AP+ ++
Sbjct: 356 AALVL---EERTQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSK 412

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
            P  +      G  V L C+   +P+   +W      +    R ++L  G LKI +V  A
Sbjct: 413 NPMKKLVQVQVGSLVSLDCKPRASPRARSSWKKGDVSVQEHERISLLNDGGLKIANVTKA 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L + 
Sbjct: 473 DAGIYTCMAENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDII 532

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 533 FTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADL 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
            V+     P N  + ++ D   A +SW       +PV   S++       G++  T    
Sbjct: 593 IVRGSPGPPENVKVDEITDT-TAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT---- 647

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 648 ----TVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S      GS S   + W  V  E  NG   GY + ++ +  T     ++ +    D 
Sbjct: 702 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTT---WIQTVVTSPDT 758

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y + +  Y   G+G  S    +F     P   P  V     + + 
Sbjct: 759 PRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSE 818

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FW 641
           + +SW  +P    N     Y + +W
Sbjct: 819 IEVSWNTIPWKLSNGHLLGYEVRYW 843



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 157/618 (25%), Positives = 244/618 (39%), Gaps = 48/618 (7%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V  A+       ++           P   V+ PE + AA
Sbjct: 181 LYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 240

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P S      + +     + I N ++ D G+Y C
Sbjct: 241 KGSTVKLECFALGNPIPQINWRRSDGLPFSS---KIKLRKFSGVLEIPNFQQEDAGSYEC 297

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K+V    L +   P   +  KD       ++   CR  G PKP   W+ N
Sbjct: 298 IAENSRG---KNVARGRLTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYRWLKN 354

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
              L     T +E G L I++++  DSG + C A NK G    S  L  V      +  P
Sbjct: 355 GAALVLEERTQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNP 414

Query: 315 ED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
                +V+ G   +  C   + P  + S  W +G   +  +   R    ND  L +   +
Sbjct: 415 MKKLVQVQVGSLVSLDCKPRASPRARSS--WKKGD--VSVQEHERISLLNDGGLKIANVT 470

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQ 429
           + D+G YTC A+ +         L V  P     APSN   + V   +  ++        
Sbjct: 471 KADAGIYTCMAENQFGKANGTTHLVVTEPTRITLAPSN---MDVSVGESVILPCQVQHDP 527

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
            L   F  Y      +   +GS  E +   G S+   + + +    +   V       + 
Sbjct: 528 LLDIIFTWYFNGALADFKKDGSHFEKV--GGSSSGDLMIRNIQLKHSGKYVCMVQTGVDS 585

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
             S     V   G PG  ++++   +  +   L W + +  +  ++ Y I  Q+     V
Sbjct: 586 VSSAADLIV--RGSPGPPENVKVDEITDTTAQLSWKEGKDNHSPVISYSI--QARTPFSV 641

Query: 550 G-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPF 602
           G   +  +P + D  T +A +  L P  +Y   +    K G G  S      +    VP 
Sbjct: 642 GWQTVTTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
             P  V G G + + LVI+W  +PE   N   F Y + +R       W Q  V       
Sbjct: 702 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGV-TTWIQTVVTSPDTPR 760

Query: 663 LVLANQPT--FQPYEIKV 678
            V  N+    + PYE+KV
Sbjct: 761 YVFRNESIVPYSPYEVKV 778



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 166/727 (22%), Positives = 274/727 (37%), Gaps = 106/727 (14%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  +   +R    N   +L I ++  +D G + C   N  G   
Sbjct: 339  CRASGKPKPSYRWLKNGAALVLEERTQIEN--GALTISNLSVTDSGMFQCIAENKHGLVY 396

Query: 115  SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
            S S +L V+A AP F+  P  + +       V+ +CK    P     W      + +   
Sbjct: 397  S-SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSWKKGDVSVQEHER 455

Query: 172  NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
                  G   + I N+ K+D G Y C A N  G      ++ V+     IT AP +    
Sbjct: 456  ISLLNDG--GLKIANVTKADAGIYTCMAENQFGKANGTTHL-VVTEPTRITLAPSNMDVS 512

Query: 232  DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
             G++V+L C+V   P  ++   W  N             E  GG      +GDL I ++ 
Sbjct: 513  VGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGS----SSGDLMIRNIQ 568

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
               SG+Y C  +  + +   +  L V+                G     + + ++D + +
Sbjct: 569  LKHSGKYVCMVQTGVDSVSSAADLIVRG-------------SPGPPENVKVDEITDTTAQ 615

Query: 339  LSIVWLRG----SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD------ 388
            LS  W  G    S  I +  + R   S  +  TVT   E+  G+       EL+      
Sbjct: 616  LS--WKEGKDNHSPVISYSIQARTPFSVGWQ-TVTTVPEVIDGKTHTATVVELNPWVEYE 672

Query: 389  --------------FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
                           + ++   T +   E P +          + V++W+PV  +   G 
Sbjct: 673  FRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGE 732

Query: 435  -------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
                   FR   V TW +           V + ES        VP S    +V  +N   
Sbjct: 733  GFGYVVAFRPLGVTTWIQTVVTSPDTPRYVFRNES-------IVPYSPYEVKVGVYNNKG 785

Query: 488  NGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSV 544
             GP S + +  + E  P    S + A  L SS   + W  +  +  NG L+GY+++Y + 
Sbjct: 786  EGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNG 845

Query: 545  KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
             G +      ++        TSA+L GL+ +  Y   +  Y  AG G  S  +       
Sbjct: 846  SGKEESSSKVKVA----GNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSATVNVTTKKT 901

Query: 601  -PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
             P + P NV    +T   ++++W  +  +E+ +    Y++F+R  +     N   VL+  
Sbjct: 902  PPSQPPGNVVWN-ATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQ----NNVQVLNTN 956

Query: 660  Q--SELVLANQPTFQPYEIKVVQTWTEKDGEGS----IRELIVNKGESTTTEVDKFVPAS 713
            +  +ELVL   P  + Y I+V  T    DG  S    I  +       +T+ +    P S
Sbjct: 957  KTSAELVL---PIKEDYIIEVKATTDGGDGTSSEQIRIPRITSMDARGSTSAISNVHPMS 1013

Query: 714  KNFARVL 720
                 VL
Sbjct: 1014 SYMPIVL 1020



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 147/374 (39%), Gaps = 28/374 (7%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFSDQGSY 102
           V   +KK+ L C   G P P   W  +G  I+ S +   + N G  ++I      D G+Y
Sbjct: 39  VGSEDKKITLNCEARGNPSPHYRWQLNGSDIDMSMEHRYKLNGGNLVVINPNRNWDTGTY 98

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEI 157
            C  +N +G   S    L       F T     ++  E + V   C   G P    E   
Sbjct: 99  QCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLC---GPPPHSGELSY 155

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDVYVN 213
            W+ N  P S    + RR V      + I  +  SD GNY C  T+ +    V       
Sbjct: 156 AWIFNEYP-SFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPL 214

Query: 214 VL-------AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           VL        + P+I  + P+      G TV L C   G P P++NW  +       +  
Sbjct: 215 VLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIK 274

Query: 266 ILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
           + + +G L+I +    D+G Y C A N  G     G LT     H     +D E+    S
Sbjct: 275 LRKFSGVLEIPNFQQEDAGSYECIAENSRGKNVARGRLTYYAKPHWVQLIKDVEIAVEDS 334

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             + C A   P  K S  WL+    +  E      Q  + +LT++  S  DSG + C A+
Sbjct: 335 LYWECRASGKP--KPSYRWLKNGAALVLEER---TQIENGALTISNLSVTDSGMFQCIAE 389

Query: 385 TELDFIEAQATLTV 398
            +   + + A L V
Sbjct: 390 NKHGLVYSSAELKV 403



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 125/300 (41%), Gaps = 32/300 (10%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +E++ +T  C+A G P P   W  NG  I  +  +  +  G
Sbjct: 22  LLQGPVFIKEPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDIDMSMEHRYKLNG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N + I   R  DTG Y C ATNSLG +         A+        +   +V +G+ VV
Sbjct: 82  GNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        WI N+     E    R+   ETG L I+ V  +D G YTC 
Sbjct: 142 LLC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCV 197

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
             + +  A+  GS   L ++    + +         PE      G +    C A+ +P  
Sbjct: 198 VTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +++  W R S+ + F S+ +  + +   L +    + D+G Y C A+       A+  LT
Sbjct: 258 QIN--WRR-SDGLPFSSKIKLRKFSGV-LEIPNFQQEDAGSYECIAENSRGKNVARGRLT 313


>gi|410964135|ref|XP_003988611.1| PREDICTED: contactin-1 isoform 2 [Felis catus]
          Length = 1007

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 188/727 (25%), Positives = 296/727 (40%), Gaps = 88/727 (12%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 230 PADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 287

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G+Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 288 NIQLEDEGTYECEAENNRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 343

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 344 TGKPIPTIRWLKNGYAYHKG------ELRLYDVTFEN-----AGMYQCIAENTHGAIYAN 392

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 393 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 452

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 453 WEDGSLEINNITRNDGGIYTCFAENNRGRANNTGTLVITDPTRIILAPINADITVGENAT 512

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ +W      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 513 MQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 572

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            AQT +D   A A L V+ P   P     I+ I A    ++W+  S          Y +Q
Sbjct: 573 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYTIQ 629

Query: 442 TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           T T    D + +  +  + +G          +P  +   RV+A N    G PS   + + 
Sbjct: 630 TKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNRIK 689

Query: 500 PEGVPGTVQSLEAIPLGSS--AFYLKWV--KPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
            +G    V   +    G S     + WV    E   G   GY + ++   G +   +   
Sbjct: 690 TDGAAPNVAPSDVGGGGGSNRELTITWVPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVT 749

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTP 615
            P   D      K   + PST +++ +  +   GDG         P+             
Sbjct: 750 NP---DTGRYVHKDETMRPSTAFQVKVKAFNNKGDG---------PY------------- 784

Query: 616 NNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVL----ANQPTF 671
                S TA+     +AP              EA  +  V     SE+ +      +   
Sbjct: 785 -----SLTAVINSAQDAP-------------SEAPTEVGVKVLSSSEISVHWDHVVEKIV 826

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
           + Y+I+    W   D E +   + V   E  +  ++  +P ++ F  V A N A  GPPS
Sbjct: 827 ESYQIRY---WAAHDKEAAAHRVQVTSQE-YSARLENLLPDTQYFVEVRACNSAGCGPPS 882

Query: 732 EIISFVT 738
           ++I   T
Sbjct: 883 DMIETFT 889



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 155/657 (23%), Positives = 248/657 (37%), Gaps = 85/657 (12%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 178 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTKPYPADIVV 235

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  I A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 236 QFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 292

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N+ G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 293 DEGTYECEAENNRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 351

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 352 RWLKN-----GYAY---HKGELRLYDVTFENAGMYQCIAENTHGAIYANAELKILALAPT 403

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   D SL 
Sbjct: 404 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 459

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC A+          TL +  P   + AP N  +    +A  +   S+
Sbjct: 460 INNITRNDGGIYTCFAENNRGRANNTGTLVITDPTRIILAPINADITVGENATMQCAASF 519

Query: 424 NPVSPQSLRGHFRGYKVQ-----------TWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
           +P    +    F GY +               + +GE  IR   +      T      V 
Sbjct: 520 DPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVD 579

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
            S   A ++                    G PG    L    + +++  L W +    + 
Sbjct: 580 NSSASADLVV------------------RGPPGPPGGLRIEDIRATSVALTWSRGSDNHS 621

Query: 533 VLMGYKIKYQSV-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
            +  Y I+ +++     K  K  P     P I +    +A+   L P  +Y   +     
Sbjct: 622 PISKYTIQTKTILSDDWKDAKTDP-----PII-EGNMEAARAVDLIPWMEYEFRVVATNT 675

Query: 588 AGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            G G  S      K     P   P +V G G +   L I+W  +    H   +F Y + +
Sbjct: 676 LGIGEPSIPSNRIKTDGAAPNVAPSDVGGGGGSNRELTITWVPLSREYHYGNNFGYIVAF 735

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
           +  + GE W +  V +      V  ++ T +P   +++KV     + DG  S+  +I
Sbjct: 736 KPFD-GEEWKKVTVTNPDTGRYVHKDE-TMRPSTAFQVKVKAFNNKGDGPYSLTAVI 790



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 140/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   I+  SDR S    G +L+I + +   D G Y C  S
Sbjct: 49  KVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 106

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 107 NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 160

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 161 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 217

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 218 LIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 277

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 278 STSGAVLKIFNIQLEDEGTYECEAENNRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 337

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+       + E R      Y +T       ++G Y C A+ 
Sbjct: 338 YWPCVATGKPI--PTIRWLKNGYAY-HKGELRL-----YDVTFE-----NAGMYQCIAEN 384

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 385 THGAIYANAELKI 397



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   I     +    VG N +   
Sbjct: 36  PINTIYPE---ESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTS-DRYSMVGGNLVINN 91

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   +
Sbjct: 92  PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 151

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 152 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 211

Query: 299 SGSL---------TVKEH-THITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                        T K +   I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 212 FSKFIPLIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPV--PDIRWRKVLE 269

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 270 PMPSTAE---ISTSGAVLKIFNIQLEDEGTYECEAENNRGKDKHQARIYVQ 317



 Score = 44.3 bits (103), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+    ++V+ + +  V W+ V  + +      Y+++ W   D E +   + V   
Sbjct: 797 PSEAPTEVG-VKVLSSSEISVHWDHVVEKIVES----YQIRYWAAHDKEAAAHRVQVTSQ 851

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GPPS++I   T +  P     + +     S +
Sbjct: 852 E-YSARLENLLPDTQYFVEVRACNSAGCGPPSDMIETFTKKAPPSQPPRIISSIRSGSRY 910

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYK+ Y+
Sbjct: 911 IITWDHVVALSNESTVTGYKVLYR 934


>gi|193788222|dbj|BAG53116.1| unnamed protein product [Homo sapiens]
          Length = 699

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/388 (31%), Positives = 182/388 (46%), Gaps = 24/388 (6%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P  IW + DG PI    R  + N    L I + +  D G Y C   N 
Sbjct: 243 VKLECFALGNPVPTIIWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGLYECVAENS 300

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P +  +   I+ A EE V +ECKA+G P+P   W+ NG+P+   
Sbjct: 301 RGKNVARG-QLTFYAQPNWIQKINDIHVAMEENVFWECKANGRPKPTYKWLKNGEPLLT- 358

Query: 170 PPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
               R ++    G   ITI NL  SD G Y C A N  G ++ +  ++V+A  P+ +   
Sbjct: 359 ----RDRIQIEQGTLNITIVNL--SDAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTL 412

Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADS 282
               T+   G  VV+ C+   +PKP   W   +  L    R TI E G+L+I +V  +D+
Sbjct: 413 LKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDA 472

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           G YTC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   
Sbjct: 473 GSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSGMDVTVGESIVLPCQVTHDHSLDIVFT 532

Query: 343 WLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           W      IDF+ +         Q +   L +       +G+Y C  QT +D + A A L 
Sbjct: 533 WSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLI 592

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           V+ P   P   T+ ++ D   A +SW P
Sbjct: 593 VRGPPGPPEAVTIDEITDT-TAQLSWRP 619



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 137/333 (41%), Gaps = 32/333 (9%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V+ PE +  
Sbjct: 178 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPT 237

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   +GKPI++     RR      + I N ++ D G Y 
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIAR---KARRHKSNGILEIPNFQQEDAGLYE 294

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P   +   D +    + V   C+  G PKP   W+ N 
Sbjct: 295 CVAENSRGKNVARGQLTFYAQ-PNWIQKINDIHVAMEENVFWECKANGRPKPTYKWLKNG 353

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           + L       +E G L IT V  +D+G Y C A NK G    +  L+V     I   P+ 
Sbjct: 354 EPLLTRDRIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSV-----IAVGPDF 408

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  K    W +G + I  E+E R   S D +L +
Sbjct: 409 SRTLLKRVTLVKVGGEVVIECKPKASP--KPVYTWKKGRD-ILKENE-RITISEDGNLRI 464

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
              ++ D+G YTC A        +   L V+ P
Sbjct: 465 INVTKSDAGSYTCIATNHFGTASSTGNLVVKDP 497



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 143/369 (38%), Gaps = 30/369 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  ++            SL+I +  +  D G+Y C  +
Sbjct: 44  KKVKLNCEVKGNPKPHIRWKLNGTDVDTGMDFRYSVVEGSLLINNPNKTQDAGTYQCTAT 103

Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVHN 162
           N  G   S    L       F T     ++    + +   C   G P    E    W+ N
Sbjct: 104 NSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMVLLC---GPPPHSGELSYAWIFN 160

Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN- 213
             P  Q   + RR V      + I  + KSD GNY C  TN+      LG     +  N 
Sbjct: 161 EYPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRND 217

Query: 214 --VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILET 269
             +  + P+I  + P+   T  G TV L C   G P P + W   + K +          
Sbjct: 218 GVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHKSN 277

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I +    D+G Y C A N  G     G LT     +   +  D  V   ++  + C
Sbjct: 278 GILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAMEENVFWEC 337

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   P  K +  WL+  EP+        +Q    +L +T  +  D+G Y C A+ +   
Sbjct: 338 KANGRP--KPTYKWLKNGEPLLTRDR---IQIEQGTLNITIVNLSDAGMYQCLAENKHGV 392

Query: 390 IEAQATLTV 398
           I + A L+V
Sbjct: 393 IFSNAELSV 401



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 117/303 (38%), Gaps = 34/303 (11%)

Query: 119 DLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D S L  P F  EP    F   +EE+ V   C+  G P+P I W  NG  +     + R 
Sbjct: 19  DDSTLHGPIFIQEPSPVMFPLDSEEKKVKLNCEVKGNPKPHIRWKLNGTDVDTG-MDFRY 77

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            V    + I N  K+ D G Y C ATNS G +         A+        +   +V  G
Sbjct: 78  SVVEGSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRG 137

Query: 234 KTVVLTCRVFGAPKPEVN-----WIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYT 286
           + +VL C     P P        WI N+        R+   ETG+L I  V  +D G YT
Sbjct: 138 QGMVLLC----GPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYT 193

Query: 287 CFARNK------LG-----TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           C   N       LG       +  G +   E       PE      G +    C A+ +P
Sbjct: 194 CVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNP 253

Query: 336 SLKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
               +I+W R   +PI    + R  +SN   L +    + D+G Y C A+       A+ 
Sbjct: 254 V--PTIIWRRADGKPI--ARKARRHKSNGI-LEIPNFQQEDAGLYECVAENSRGKNVARG 308

Query: 395 TLT 397
            LT
Sbjct: 309 QLT 311


>gi|75709184|ref|NP_065923.1| contactin-3 precursor [Homo sapiens]
 gi|296439395|sp|Q9P232.3|CNTN3_HUMAN RecName: Full=Contactin-3; AltName: Full=Brain-derived
           immunoglobulin superfamily protein 1; Short=BIG-1;
           AltName: Full=Plasmacytoma-associated neuronal
           glycoprotein; Flags: Precursor
 gi|168275494|dbj|BAG10467.1| contactin-3 precursor [synthetic construct]
          Length = 1028

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 167/625 (26%), Positives = 267/625 (42%), Gaps = 48/625 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P   S +I    +   L I + +  D GSY 
Sbjct: 239 AAKGSTVKLECFALGNPIPQINWRRSDGLPF--SSKIKLRKFSGVLEIPNFQQEDAGSYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    + +  A E+++ +EC+ASG P+P   W+ NG
Sbjct: 297 CIAENSRGKNVARG-RLTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYRWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +       R ++    +TI NL  +D+G + C A N  G VY    + V+A AP+ ++
Sbjct: 356 AALVL---EERTQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSK 412

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
            P  +      G  V L C+   +P+   +W      +    R ++L  G LKI +V  A
Sbjct: 413 NPMKKLVQVQVGSLVSLDCKPRASPRALSSWKKGDVSVQEHERISLLNDGGLKIANVTKA 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L + 
Sbjct: 473 DAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDII 532

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 533 FTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADL 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
            V+     P N  + ++ D   A +SW       +PV   S++       G++  T    
Sbjct: 593 IVRGSPGPPENVKVDEITDT-TAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT---- 647

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 648 ----TVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S      GS S   + W  V  E  NG   GY + ++ +    V   ++ +    D 
Sbjct: 702 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPL---GVTTWIQTVVTSPDT 758

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y + +  Y   G+G  S    +F     P   P  V     + + 
Sbjct: 759 PRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSE 818

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FW 641
           + +SW  +P    N     Y + +W
Sbjct: 819 IEVSWNTIPWKLSNGHLLGYEVRYW 843



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 157/618 (25%), Positives = 243/618 (39%), Gaps = 48/618 (7%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V  A+       ++           P   V+ PE + AA
Sbjct: 181 LYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 240

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P S      + +     + I N ++ D G+Y C
Sbjct: 241 KGSTVKLECFALGNPIPQINWRRSDGLPFSS---KIKLRKFSGVLEIPNFQQEDAGSYEC 297

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K+V    L +   P   +  KD       ++   CR  G PKP   W+ N
Sbjct: 298 IAENSRG---KNVARGRLTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYRWLKN 354

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
              L     T +E G L I++++  DSG + C A NK G    S  L  V      +  P
Sbjct: 355 GAALVLEERTQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNP 414

Query: 315 ED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
                +V+ G   +  C   + P    S  W +G   +  +   R    ND  L +   +
Sbjct: 415 MKKLVQVQVGSLVSLDCKPRASPRALSS--WKKGD--VSVQEHERISLLNDGGLKIANVT 470

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQ 429
           + D+G YTC A+ +         L V  P     APSN   + V   +  ++        
Sbjct: 471 KADAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSN---MDVSVGESVILPCQVQHDP 527

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
            L   F  Y      +   +GS  E +   G S+   + + +    +   V       + 
Sbjct: 528 LLDIIFTWYFNGALADFKKDGSHFEKV--GGSSSGDLMIRNIQLKHSGKYVCMVQTGVDS 585

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
             S     V   G PG  ++++   +  +   L W + +  +  ++ Y I  Q+     V
Sbjct: 586 VSSAADLIV--RGSPGPPENVKVDEITDTTAQLSWKEGKDNHSPVISYSI--QARTPFSV 641

Query: 550 G-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPF 602
           G   +  +P + D  T +A +  L P  +Y   +    K G G  S      +    VP 
Sbjct: 642 GWQTVTTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
             P  V G G + + LVI+W  +PE   N   F Y + +R       W Q  V       
Sbjct: 702 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGV-TTWIQTVVTSPDTPR 760

Query: 663 LVLANQPT--FQPYEIKV 678
            V  N+    + PYE+KV
Sbjct: 761 YVFRNESIVPYSPYEVKV 778



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 166/727 (22%), Positives = 274/727 (37%), Gaps = 106/727 (14%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  +   +R    N   +L I ++  +D G + C   N  G   
Sbjct: 339  CRASGKPKPSYRWLKNGAALVLEERTQIEN--GALTISNLSVTDSGMFQCIAENKHGLVY 396

Query: 115  SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
            S S +L V+A AP F+  P  + +       V+ +CK    P     W      + +   
Sbjct: 397  S-SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRALSSWKKGDVSVQEHER 455

Query: 172  NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
                  G   + I N+ K+D G Y C A N  G      ++ V+     IT AP +    
Sbjct: 456  ISLLNDG--GLKIANVTKADAGTYTCMAENQFGKANGTTHL-VVTEPTRITLAPSNMDVS 512

Query: 232  DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
             G++V+L C+V   P  ++   W  N             E  GG      +GDL I ++ 
Sbjct: 513  VGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGS----SSGDLMIRNIQ 568

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
               SG+Y C  +  + +   +  L V+                G     + + ++D + +
Sbjct: 569  LKHSGKYVCMVQTGVDSVSSAADLIVRG-------------SPGPPENVKVDEITDTTAQ 615

Query: 339  LSIVWLRG----SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD------ 388
            LS  W  G    S  I +  + R   S  +  TVT   E+  G+       EL+      
Sbjct: 616  LS--WKEGKDNHSPVISYSIQARTPFSVGWQ-TVTTVPEVIDGKTHTATVVELNPWVEYE 672

Query: 389  --------------FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
                           + ++   T +   E P +          + V++W+PV  +   G 
Sbjct: 673  FRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGE 732

Query: 435  -------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
                   FR   V TW +           V + ES        VP S    +V  +N   
Sbjct: 733  GFGYVVAFRPLGVTTWIQTVVTSPDTPRYVFRNES-------IVPYSPYEVKVGVYNNKG 785

Query: 488  NGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSV 544
             GP S + +  + E  P    S + A  L SS   + W  +  +  NG L+GY+++Y + 
Sbjct: 786  EGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNG 845

Query: 545  KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
             G +      ++        TSA+L GL+ +  Y   +  Y  AG G  S  +       
Sbjct: 846  GGKEESSSKMKVA----GNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSATVNVTTKKT 901

Query: 601  -PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
             P + P NV    +T   ++++W  +  +E+ +    Y++F+R  +     N   VL+  
Sbjct: 902  PPSQPPGNVVWN-ATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQ----NNVQVLNTN 956

Query: 660  Q--SELVLANQPTFQPYEIKVVQTWTEKDGEGS----IRELIVNKGESTTTEVDKFVPAS 713
            +  +ELVL   P  + Y I+V  T    DG  S    I  +       +T+ +    P S
Sbjct: 957  KTSAELVL---PIKEDYIIEVKATTDGGDGTSSEQIRIPRITSMDARGSTSAISNVHPMS 1013

Query: 714  KNFARVL 720
                 VL
Sbjct: 1014 SYMPIVL 1020



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 147/374 (39%), Gaps = 28/374 (7%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFSDQGSY 102
           V   +KK+ L C   G P P   W  +G  I+ S +   + N G  ++I      D G+Y
Sbjct: 39  VGSEDKKITLHCEARGNPSPHYRWQLNGSDIDMSMEHRYKLNGGNLVVINPNRNWDTGTY 98

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEI 157
            C  +N +G   S    L       F T     ++  E + V   C   G P    E   
Sbjct: 99  QCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLC---GPPPHSGELSY 155

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDVYVN 213
            W+ N  P S    + RR V      + I  +  SD GNY C  T+ +    V       
Sbjct: 156 AWIFNEYP-SFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPL 214

Query: 214 VL-------AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           VL        + P+I  + P+      G TV L C   G P P++NW  +       +  
Sbjct: 215 VLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIK 274

Query: 266 ILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
           + + +G L+I +    D+G Y C A N  G     G LT     H     +D E+    S
Sbjct: 275 LRKFSGVLEIPNFQQEDAGSYECIAENSRGKNVARGRLTYYAKPHWVQLIKDVEIAVEDS 334

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             + C A   P  K S  WL+    +  E      Q  + +LT++  S  DSG + C A+
Sbjct: 335 LYWECRASGKP--KPSYRWLKNGAALVLEER---TQIENGALTISNLSVTDSGMFQCIAE 389

Query: 385 TELDFIEAQATLTV 398
            +   + + A L V
Sbjct: 390 NKHGLVYSSAELKV 403



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 125/300 (41%), Gaps = 32/300 (10%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +E++ +T  C+A G P P   W  NG  I  +  +  +  G
Sbjct: 22  LLQGPVFIKEPSNSIFPVGSEDKKITLHCEARGNPSPHYRWQLNGSDIDMSMEHRYKLNG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N + I   R  DTG Y C ATNSLG +         A+        +   +V +G+ VV
Sbjct: 82  GNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        WI N+     E    R+   ETG L I+ V  +D G YTC 
Sbjct: 142 LLC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCV 197

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
             + +  A+  GS   L ++    + +         PE      G +    C A+ +P  
Sbjct: 198 VTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +++  W R S+ + F S+ +  + +   L +    + D+G Y C A+       A+  LT
Sbjct: 258 QIN--WRR-SDGLPFSSKIKLRKFSGV-LEIPNFQQEDAGSYECIAENSRGKNVARGRLT 313


>gi|427788459|gb|JAA59681.1| Putative contactin 5 [Rhipicephalus pulchellus]
          Length = 1216

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 191/422 (45%), Gaps = 16/422 (3%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           E  L    V L CI  G P+P+  W++ G P+    +IS  ++G+ L++  V   D G Y
Sbjct: 405 EAPLAGNDVRLECIAYGYPVPKYNWTRVGGPMPAGAQIS--SHGRVLLLPRVRVEDLGEY 462

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C +++   ++    + L++ A P FT+  E   A E   +T+ C+A G+PE   HW  N
Sbjct: 463 VC-IASADQDSIRKGVTLTIQAMPEFTIPLEHQVADEGSRLTWTCEAFGIPEVVYHWYRN 521

Query: 163 GKPI---SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
           G+ +   S      R KV  N + IE++ ++D G Y C+ATNSLG  +    + V+  AP
Sbjct: 522 GEKLNTESSDDMRARYKVDDNILVIEDINRADEGMYQCSATNSLGTSFSTAQLRVVTMAP 581

Query: 220 EITEAPKDE--YTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITD 276
              + P D   Y  +   + + CR   AP PE  W  N      GGR  +L  G L+I  
Sbjct: 582 NFAKYPLDTEMYAAEEGNITIPCRPEAAPYPEFTWRKNGYTFALGGRTQMLSNGYLRIDP 641

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE-AGQSATFRCNAVSDP 335
           V   D G YTC  +N+ GTA  +G+L V       + P    V   G      C+A++  
Sbjct: 642 VRREDEGNYTCVVKNQYGTASSTGALVVLSLPRSVEAPPPKVVATVGSLEELHCHALAPH 701

Query: 336 SLKLSIVWLRGSEPIDFESEPRF-VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
            L LS +WL     I     P++ V      L +   S  ++G YTC A+T +  + A  
Sbjct: 702 MLDLSYIWLHNDLRIHPHEWPQYGVGYRPGYLVIYNVSFAEAGHYTCIAKTSVGKVFANT 761

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRE 454
            L V  P   P    L    +A    + W      S   H   Y ++  T  +   + RE
Sbjct: 762 ELLVLGPPGQPGA-VLGHSFNATSGFIEW--ADGTSHGSHITSYAIEGRTNHN--ATWRE 816

Query: 455 LI 456
           L+
Sbjct: 817 LL 818



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 164/716 (22%), Positives = 272/716 (37%), Gaps = 96/716 (13%)

Query: 41   KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINP-SDRISQGNY---GKSLIIKHVEF 96
            + +VA    ++   C   G P     W ++G  +N  S    +  Y      L+I+ +  
Sbjct: 492  EHQVADEGSRLTWTCEAFGIPEVVYHWYRNGEKLNTESSDDMRARYKVDDNILVIEDINR 551

Query: 97   SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPE 154
            +D+G Y C  +N +G + S +    V  AP F   P    + AAEE  +T  C+    P 
Sbjct: 552  ADEGMYQCSATNSLGTSFSTAQLRVVTMAPNFAKYPLDTEMYAAEEGNITIPCRPEAAPY 611

Query: 155  PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
            PE  W  NG   +       + +    + I+ +R+ D GNY C   N  G       + V
Sbjct: 612  PEFTWRKNGYTFALG--GRTQMLSNGYLRIDPVRREDEGNYTCVVKNQYGTASSTGALVV 669

Query: 215  LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVN--WIHNQKELTGGRY----TILE 268
            L+    +   P       G    L C        +++  W+HN   +    +        
Sbjct: 670  LSLPRSVEAPPPKVVATVGSLEELHCHALAPHMLDLSYIWLHNDLRIHPHEWPQYGVGYR 729

Query: 269  TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTV------------------------ 304
             G L I +V+FA++G YTC A+  +G    +  L V                        
Sbjct: 730  PGYLVIYNVSFAEAGHYTCIAKTSVGKVFANTELLVLGPPGQPGAVLGHSFNATSGFIEW 789

Query: 305  ----KEHTHITDQPEDYEVEA--GQSATFR--CNAVSDPSLKLSIVWLRGSEPIDFESEP 356
                   +HIT     Y +E     +AT+R   N    P  K        S   + E   
Sbjct: 790  ADGTSHGSHITS----YAIEGRTNHNATWRELLNVTYAPPSKQH----HASGRREVELGN 841

Query: 357  RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDA 416
                 + Y   VT ++ L  GQ +  +         Q    V  P  AP N        A
Sbjct: 842  VLSPWSKYEFRVTAANILGVGQPSDPS--------PQYNTAVDRPYIAPRN-VGGGGGKA 892

Query: 417  KKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE----------GSIRELIVNKGESTTTE 466
                ++W P+SP+        Y+V      D            G++   +V  GE     
Sbjct: 893  GSLTITWTPLSPEEWNSPEVWYRVYYRPSGDRSEPRKKDLRKLGNVGLYVVPVGEE---- 948

Query: 467  VDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW- 524
             + F P      +V A N    GP SE     + EG+P    S + A+P  S+A  + W 
Sbjct: 949  -NYFSPYE---VQVQAVNVVGEGPISEPEIVYSAEGMPQVQPSGVYAVPHNSTALNVTWN 1004

Query: 525  ---VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIH 581
               +  E+  G L+G++IKY     + +   L+ L  +         + GL+P+T+YR+ 
Sbjct: 1005 PLDITREKIRGRLIGHRIKYWR---SDLDRELDSLILLKRGIENWGLIVGLQPNTEYRVA 1061

Query: 582  LAGYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTA-MPEIEHNAPH- 634
            +  Y +AG G ES++         P + P +V+    +P ++ ++W   +P IE  +   
Sbjct: 1062 VMAYNEAGSGPESEFFVAKTFKAAPLRPPTSVKVHALSPTSVRVTWRGVVPSIEEESIQG 1121

Query: 635  FKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGS 690
            +K R +    +   A      LD    E V++     + Y+++V+      DG+ S
Sbjct: 1122 YKVRYWEADQDLTSAKEVYKQLDGEDLEAVVSGLVPGKVYKLRVLAWSFGGDGKMS 1177



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 140/386 (36%), Gaps = 47/386 (12%)

Query: 51  VELFCIFGGTPLPQTIWSKD--------GVPINPSDRISQGNYGKSLIIKHVEFSDQ--- 99
           + L C+  G P P   W K+         + I+P   +S G + ++     + + DQ   
Sbjct: 208 ISLRCVAEGNPPPTYKWFKEEYANDELLNIYIDP---LSNGRFTQTDGTLTIHYPDQTRD 264

Query: 100 -GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPEPEI 157
            G Y C   N  G+  S S+ L       F    EF  N A +    F  K+     P+ 
Sbjct: 265 RGKYHCMAENKYGKVLSRSVALG------FGFIGEFNKNRAGDSGKEFWGKSVSCDPPQF 318

Query: 158 H------WVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYK-D 209
           +      WV N  P      +PR  V  +  +   +L K+D  NY CN  + +    +  
Sbjct: 319 NPAVHYFWVRNAFP-DFVQEDPRVFVSHDGNLYFSSLEKNDDANYSCNVQSRISSTGRTG 377

Query: 210 VYVNVLAHAPEITEA-------PKD--EYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT 260
            Y ++L       +        PK   E  + G  V L C  +G P P+ NW      + 
Sbjct: 378 PYFHLLVEPASSGQKLLFPNNFPKSFPEAPLAGNDVRLECIAYGYPVPKYNWTRVGGPMP 437

Query: 261 GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
            G         L +  V   D GEY C A     + +   +LT++     T   E    +
Sbjct: 438 AGAQISSHGRVLLLPRVRVEDLGEYVCIASADQDSIRKGVTLTIQAMPEFTIPLEHQVAD 497

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF---VQSNDYSLTVTKSSELDSG 377
            G   T+ C A   P +     W R  E ++ ES        + +D  L +   +  D G
Sbjct: 498 EGSRLTWTCEAFGIPEVVYH--WYRNGEKLNTESSDDMRARYKVDDNILVIEDINRADEG 555

Query: 378 QYTCRAQTEL--DFIEAQATLTVQVP 401
            Y C A   L   F  AQ  +    P
Sbjct: 556 MYQCSATNSLGTSFSTAQLRVVTMAP 581


>gi|432960260|ref|XP_004086435.1| PREDICTED: neural cell adhesion molecule L1.1-like [Oryzias
           latipes]
          Length = 1149

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 178/366 (48%), Gaps = 21/366 (5%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIW-SKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           +AL+   V L CI  G P P   W  KDG   + S R+   N+ + L   ++   D G Y
Sbjct: 138 LALKGDSVTLECIPKGLPTPIVEWRKKDGTLKDMSGRLK--NHNRWLYFDNISQEDDGEY 195

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C  SN +G A +++  ++V AAPY+  EP+ +  A  ETV  +C A G+P P I W  N
Sbjct: 196 ECRASNSLGFA-THTFTVTVEAAPYWVKEPQNLMYAPGETVRLDCLADGIPTPSITWSMN 254

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           G+ +++   +PRR +  + + + ++  SDT  Y C ATN  G +  +  + V+   P+I 
Sbjct: 255 GQALAEVDDDPRRSITSSSLILRDVEVSDTAVYQCEATNRHGSILLNTNLFVVELPPQIL 314

Query: 223 EAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAF 279
            +    Y V +G  V L C  FG+P+P   W        L   R ++   G ++++ V+ 
Sbjct: 315 SSDGVIYRVIEGSDVNLHCESFGSPRPHTTWTREDMVPLLVDPRASLFTNGTIQLSSVSH 374

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK- 338
            D G YTC    K      S +L V   T I++ P+D  V  G +A   C+   DP L+ 
Sbjct: 375 EDGGTYTCSV--KFSNISISANLEVFNQTTISEGPKDIRVLEGTTALLACDFYKDPRLQD 432

Query: 339 LSIVW------LRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
             + W      L+GS P D     ++    + +L +TK    DS  Y+C   T LD   A
Sbjct: 433 FYVKWKRDGVELQGSLPDD-----KYTIFTNGTLEMTKVHLNDSAHYSCEVSTVLDHATA 487

Query: 393 QATLTV 398
           + ++TV
Sbjct: 488 KGSITV 493



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 162/691 (23%), Positives = 264/691 (38%), Gaps = 116/691 (16%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKD--GVPINPSDRISQGNYGKSLI 90
           PKQ+   +++  A   + + L C    +  P  I   D   V IN SDR+  G  G    
Sbjct: 23  PKQK---KQRREAYERESIVLTCNPPQSSSPLKIHWMDFTMVHINQSDRVMTGLDGNLYF 79

Query: 91  IKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA--APYFTVEPE--------------- 133
              +    +  Y C           Y+  L++L   A   TV P                
Sbjct: 80  SNLLSSDSRDDYICNAQ--------YAAALTILTVTAVSLTVLPSNDVIYGKKTELFRPT 131

Query: 134 ----FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRK 189
                I A + ++VT EC   GLP P + W      +     + R K     +  +N+ +
Sbjct: 132 GLHSSILALKGDSVTLECIPKGLPTPIVEWRKKDGTLKDM--SGRLKNHNRWLYFDNISQ 189

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A+NSLG+      V V A AP   + P++     G+TV L C   G P P 
Sbjct: 190 EDDGEYECRASNSLGFATHTFTVTVEA-APYWVKEPQNLMYAPGETVRLDCLADGIPTPS 248

Query: 250 VNWIHNQKELT----GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           + W  N + L       R +I  +  L + DV  +D+  Y C A N+ G+   + +L V 
Sbjct: 249 ITWSMNGQALAEVDDDPRRSITSSS-LILRDVEVSDTAVYQCEATNRHGSILLNTNLFVV 307

Query: 306 EH--THITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSND 363
           E     ++     Y V  G      C +   P  +    W R  + +    +PR     +
Sbjct: 308 ELPPQILSSDGVIYRVIEGSDVNLHCESFGSP--RPHTTWTR-EDMVPLLVDPRASLFTN 364

Query: 364 YSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPL-EAPSNFTLIQVIDAKKAVVS 422
            ++ ++  S  D G YTC  +     I A   +  Q  + E P +   I+V++   A+++
Sbjct: 365 GTIQLSSVSHEDGGTYTCSVKFSNISISANLEVFNQTTISEGPKD---IRVLEGTTALLA 421

Query: 423 WNPVSPQSLRGHFRGYKVQTWTEKDG---EGSI---RELIVNKGESTTTEVDKFVPASKN 476
            +      L+  +  +K      +DG   +GS+   +  I   G    T+V         
Sbjct: 422 CDFYKDPRLQDFYVKWK------RDGVELQGSLPDDKYTIFTNGTLEMTKVH-------- 467

Query: 477 FARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMG 536
               L  +  Y+   S ++   T +   G++  +E I           V+ E+       
Sbjct: 468 ----LNDSAHYSCEVSTVLDHATAK---GSITVIEFI-----------VEAEE------- 502

Query: 537 YKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY 596
              K  + +G  +    ER+        T  +L  L P   YR  +    +AG+ + S+ 
Sbjct: 503 ---KLHTGEGKGIWKTWERI----SGNQTQVQLT-LRPFCTYRFRIIAVNEAGESSPSEP 554

Query: 597 LF------YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR---HNTG 647
                     P KNP +V         L I+WT + +  HN  +F YR+FWR      T 
Sbjct: 555 TEDHVTPPAAPDKNPTDVSSNSRDSGTLSITWTKVEKRFHNGDNFHYRVFWREAEGARTD 614

Query: 648 EAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
             W   DV        ++ N  T++ +EIKV
Sbjct: 615 TNWKHADVT---SPPFLVGNTSTYKRFEIKV 642



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 159/712 (22%), Positives = 266/712 (37%), Gaps = 131/712 (18%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
            +    V L C   G+P P T W++ D VP+    R S    G ++ +  V   D G+YT
Sbjct: 323 VIEGSDVNLHCESFGSPRPHTTWTREDMVPLLVDPRASLFTNG-TIQLSSVSHEDGGTYT 381

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC---KASGLPEPEIHWV 160
           C V        S S +L V      +  P+ I   E  T    C   K   L +  + W 
Sbjct: 382 CSVKFS---NISISANLEVFNQTTISEGPKDIRVLEGTTALLACDFYKDPRLQDFYVKWK 438

Query: 161 HNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
            +G  +  + P+ +  +  N  + +  +  +D+ +Y C  +  L +      + V+    
Sbjct: 439 RDGVELQGSLPDDKYTIFTNGTLEMTKVHLNDSAHYSCEVSTVLDHATAKGSITVIEF-- 496

Query: 220 EITEAPKDEYTVDGK--------------TVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
            I EA +  +T +GK               V LT R F   +  +  ++   E +    T
Sbjct: 497 -IVEAEEKLHTGEGKGIWKTWERISGNQTQVQLTLRPFCTYRFRIIAVNEAGESSPSEPT 555

Query: 266 --------------------ILETGDLKITDVAF------ADSGEYTCFARNKLGTAQGS 299
                                 ++G L IT           D+  Y  F R     A+G+
Sbjct: 556 EDHVTPPAAPDKNPTDVSSNSRDSGTLSITWTKVEKRFHNGDNFHYRVFWRE----AEGA 611

Query: 300 GSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFV 359
            + T  +H  +T  P       G ++T++   +     K+  +   G  P   E E R  
Sbjct: 612 RTDTNWKHADVTSPP----FLVGNTSTYKRFEI-----KVQAINSIGKGP---EPEKRIG 659

Query: 360 QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKA 419
            S +           +S Q     +  LD + A++      P ++P+  +    +     
Sbjct: 660 YSAE-----------ESKQLIMELKGVLDLLNAESE-----PEDSPTEVS--TTVKNCTV 701

Query: 420 VVSWNPVSPQSLRGHFRGYKV------------QTWTEKDGEGSIRE------------- 454
            V W P  P+ ++G  +G+K+            Q+   K      RE             
Sbjct: 702 EVRWRP--PKRVQGLLKGFKIYFSSLGPRSTEHQSSFSKHHHVEQREKPEGRSHKDKRSW 759

Query: 455 LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
           ++  +G +T+ EVD           V AFN    GP S    F TPEGVPG   SL    
Sbjct: 760 VVEVEGTNTSKEVDGLRWYWHYELSVTAFNSKGEGPHSPSRRFETPEGVPGPPASLWYKS 819

Query: 515 LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
              +   L W  P   NGVL+ Y ++Y+  + ++  P+  R+  I DP+     L  L P
Sbjct: 820 PTDTTLILHWSPPLDANGVLLAYMVQYK--EESQDSPM--RMQMIHDPSVNHIVLNDLNP 875

Query: 575 STKYRIHLAGYTKAGDGAE-----SKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIE 629
           S+ Y   +  +T  G G       +  L  VP   P NV    S   +  +SWT     E
Sbjct: 876 SSYYEFKVIAHTAVGAGEPINRRLATLLEGVP---PSNVTVDPSN-TSFNLSWTPG---E 928

Query: 630 HNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN-QPTFQPYEIKVVQ 680
            +  H  +  + ++      W + ++++  Q    L   QP  Q Y +K+++
Sbjct: 929 RHRNHVFHIYYTKKTGAASQWEESEMVNSTQGFYSLTGLQPGTQ-YHLKIMR 979


>gi|410964133|ref|XP_003988610.1| PREDICTED: contactin-1 isoform 1 [Felis catus]
          Length = 1018

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 188/727 (25%), Positives = 296/727 (40%), Gaps = 88/727 (12%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 241 PADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 298

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G+Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 299 NIQLEDEGTYECEAENNRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 354

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 355 TGKPIPTIRWLKNGYAYHKG------ELRLYDVTFEN-----AGMYQCIAENTHGAIYAN 403

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 404 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 463

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 464 WEDGSLEINNITRNDGGIYTCFAENNRGRANNTGTLVITDPTRIILAPINADITVGENAT 523

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ +W      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 524 MQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 583

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            AQT +D   A A L V+ P   P     I+ I A    ++W+  S          Y +Q
Sbjct: 584 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYTIQ 640

Query: 442 TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           T T    D + +  +  + +G          +P  +   RV+A N    G PS   + + 
Sbjct: 641 TKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNRIK 700

Query: 500 PEGVPGTVQSLEAIPLGSS--AFYLKWV--KPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
            +G    V   +    G S     + WV    E   G   GY + ++   G +   +   
Sbjct: 701 TDGAAPNVAPSDVGGGGGSNRELTITWVPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVT 760

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTP 615
            P   D      K   + PST +++ +  +   GDG         P+             
Sbjct: 761 NP---DTGRYVHKDETMRPSTAFQVKVKAFNNKGDG---------PY------------- 795

Query: 616 NNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVL----ANQPTF 671
                S TA+     +AP              EA  +  V     SE+ +      +   
Sbjct: 796 -----SLTAVINSAQDAP-------------SEAPTEVGVKVLSSSEISVHWDHVVEKIV 837

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
           + Y+I+    W   D E +   + V   E  +  ++  +P ++ F  V A N A  GPPS
Sbjct: 838 ESYQIRY---WAAHDKEAAAHRVQVTSQE-YSARLENLLPDTQYFVEVRACNSAGCGPPS 893

Query: 732 EIISFVT 738
           ++I   T
Sbjct: 894 DMIETFT 900



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 154/657 (23%), Positives = 247/657 (37%), Gaps = 85/657 (12%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 189 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTKPYPADIVV 246

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  I A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 247 QFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 303

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N+ G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 304 DEGTYECEAENNRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 362

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 363 RWLKN-----GYAY---HKGELRLYDVTFENAGMYQCIAENTHGAIYANAELKILALAPT 414

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   D SL 
Sbjct: 415 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 470

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC A+          TL +  P   + AP N  +    +A  +   S+
Sbjct: 471 INNITRNDGGIYTCFAENNRGRANNTGTLVITDPTRIILAPINADITVGENATMQCAASF 530

Query: 424 NPVSPQSLRGHFRGYKVQ-----------TWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
           +P    +    F GY +               + +GE  IR   +      T      V 
Sbjct: 531 DPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVD 590

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
            S   A ++                    G PG    L    + +++  L W +    + 
Sbjct: 591 NSSASADLVV------------------RGPPGPPGGLRIEDIRATSVALTWSRGSDNHS 632

Query: 533 VLMGYKIKYQSV-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
            +  Y I+ +++     K  K  P       I +    +A+   L P  +Y   +     
Sbjct: 633 PISKYTIQTKTILSDDWKDAKTDPP------IIEGNMEAARAVDLIPWMEYEFRVVATNT 686

Query: 588 AGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            G G  S      K     P   P +V G G +   L I+W  +    H   +F Y + +
Sbjct: 687 LGIGEPSIPSNRIKTDGAAPNVAPSDVGGGGGSNRELTITWVPLSREYHYGNNFGYIVAF 746

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
           +  + GE W +  V +      V  ++ T +P   +++KV     + DG  S+  +I
Sbjct: 747 KPFD-GEEWKKVTVTNPDTGRYVHKDE-TMRPSTAFQVKVKAFNNKGDGPYSLTAVI 801



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 140/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   I+  SDR S    G +L+I + +   D G Y C  S
Sbjct: 60  KVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 117

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 118 NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 171

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 172 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 228

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 229 LIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 288

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 289 STSGAVLKIFNIQLEDEGTYECEAENNRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 348

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+       + E R      Y +T       ++G Y C A+ 
Sbjct: 349 YWPCVATGKPI--PTIRWLKNGYAY-HKGELRL-----YDVTFE-----NAGMYQCIAEN 395

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 396 THGAIYANAELKI 408



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   I     +    VG N +   
Sbjct: 47  PINTIYPE---ESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTS-DRYSMVGGNLVINN 102

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   +
Sbjct: 103 PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 162

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 163 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 222

Query: 299 SGSL---------TVKEH-THITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                        T K +   I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 223 FSKFIPLIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPV--PDIRWRKVLE 280

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 281 PMPSTAE---ISTSGAVLKIFNIQLEDEGTYECEAENNRGKDKHQARIYVQ 328



 Score = 44.3 bits (103), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+    ++V+ + +  V W+ V  + +      Y+++ W   D E +   + V   
Sbjct: 808 PSEAPTEVG-VKVLSSSEISVHWDHVVEKIVES----YQIRYWAAHDKEAAAHRVQVTSQ 862

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GPPS++I   T +  P     + +     S +
Sbjct: 863 E-YSARLENLLPDTQYFVEVRACNSAGCGPPSDMIETFTKKAPPSQPPRIISSIRSGSRY 921

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYK+ Y+
Sbjct: 922 IITWDHVVALSNESTVTGYKVLYR 945


>gi|73996774|ref|XP_534836.2| PREDICTED: contactin-1 isoform 1 [Canis lupus familiaris]
          Length = 1007

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 188/727 (25%), Positives = 296/727 (40%), Gaps = 88/727 (12%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 230 PADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 287

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G+Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 288 NIQLEDEGTYECEAENNRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 343

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 344 TGKPIPTIRWLKNGYAYHKG------ELRLYDVTFEN-----AGMYQCIAENTHGTIYAN 392

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 393 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 452

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 453 WEDGSLEINNITRNDGGIYTCFAENNRGRANNTGTLVITDPTRIILAPINADITVGENAT 512

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ +W      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 513 MQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 572

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            AQT +D   A A L V+ P   P     I+ I A    ++W+  S          Y +Q
Sbjct: 573 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYTIQ 629

Query: 442 TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           T T    D + +  +  + +G          +P  +   RV+A N    G PS   + + 
Sbjct: 630 TKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIK 689

Query: 500 PEGVPGTVQSLEAIPLGSS--AFYLKWV--KPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
            +G    V   +    G S     + WV    E   G   GY + ++   G +   +   
Sbjct: 690 TDGAAPNVAPSDVGGGGGSNRELTITWVPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVT 749

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTP 615
            P   D      K   + PST +++ +  +   GDG         P+             
Sbjct: 750 NP---DTGRYVHKDETMRPSTAFQVKVKAFNNKGDG---------PY------------- 784

Query: 616 NNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVL----ANQPTF 671
                S TA+     +AP              EA  +  V     SE+ +      +   
Sbjct: 785 -----SLTAVINSAQDAP-------------SEAPTEVGVKVLSSSEISVHWEHVVEKIV 826

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
           + Y+I+    W   D E +   + V   E  +  ++  +P ++ F  V A N A  GPPS
Sbjct: 827 ESYQIRY---WAAHDKEAAAHRVQVTSQE-YSARLENLLPDTQYFVEVRACNSAGCGPPS 882

Query: 732 EIISFVT 738
           ++I   T
Sbjct: 883 DMIETFT 889



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 156/657 (23%), Positives = 249/657 (37%), Gaps = 85/657 (12%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 178 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTKPYPADIVV 235

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  I A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 236 QFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 292

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N+ G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 293 DEGTYECEAENNRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 351

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  GT   +  L +      
Sbjct: 352 RWLKN-----GYAY---HKGELRLYDVTFENAGMYQCIAENTHGTIYANAELKILALAPT 403

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   D SL 
Sbjct: 404 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 459

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC A+          TL +  P   + AP N  +    +A  +   S+
Sbjct: 460 INNITRNDGGIYTCFAENNRGRANNTGTLVITDPTRIILAPINADITVGENATMQCAASF 519

Query: 424 NPVSPQSLRGHFRGYKVQ-----------TWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
           +P    +    F GY +               + +GE  IR   +      T      V 
Sbjct: 520 DPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVD 579

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
            S   A ++                    G PG    L    + +++  L W +    + 
Sbjct: 580 NSSASADLVV------------------RGPPGPPGGLRIEDIRATSVALTWSRGSDNHS 621

Query: 533 VLMGYKIKYQSV-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
            +  Y I+ +++     K  K  P     P I +    +A+   L P  +Y   +     
Sbjct: 622 PISKYTIQTKTILSDDWKDAKTDP-----PII-EGNMEAARAVDLIPWMEYEFRVVATNT 675

Query: 588 AGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            G G  S      K     P   P +V G G +   L I+W  +    H   +F Y + +
Sbjct: 676 LGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWVPLSREYHYGNNFGYIVAF 735

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
           +  + GE W +  V +      V  ++ T +P   +++KV     + DG  S+  +I
Sbjct: 736 KPFD-GEEWKKVTVTNPDTGRYVHKDE-TMRPSTAFQVKVKAFNNKGDGPYSLTAVI 790



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 140/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   I+  SDR S    G +L+I + +   D G Y C  S
Sbjct: 49  KVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 106

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 107 NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 160

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 161 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 217

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 218 LIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 277

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 278 STSGAVLKIFNIQLEDEGTYECEAENNRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 337

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+       + E R      Y +T       ++G Y C A+ 
Sbjct: 338 YWPCVATGKPI--PTIRWLKNGYAY-HKGELRL-----YDVTFE-----NAGMYQCIAEN 384

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 385 THGTIYANAELKI 397



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   I     +    VG N +   
Sbjct: 36  PINTIYPE---ESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTS-DRYSMVGGNLVINN 91

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   +
Sbjct: 92  PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 151

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 152 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 211

Query: 299 SGSL---------TVKEH-THITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                        T K +   I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 212 FSKFIPLIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPV--PDIRWRKVLE 269

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 270 PMPSTAE---ISTSGAVLKIFNIQLEDEGTYECEAENNRGKDKHQARIYVQ 317



 Score = 43.5 bits (101), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+    ++V+ + +  V W  V  + +      Y+++ W   D E +   + V   
Sbjct: 797 PSEAPTEVG-VKVLSSSEISVHWEHVVEKIVES----YQIRYWAAHDKEAAAHRVQVTSQ 851

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GPPS++I   T +  P     + +     S +
Sbjct: 852 E-YSARLENLLPDTQYFVEVRACNSAGCGPPSDMIETFTKKAPPSQPPRIISSIRSGSRY 910

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYK+ Y+
Sbjct: 911 IITWDHVVALSNESTVTGYKVLYR 934


>gi|449484285|ref|XP_002198167.2| PREDICTED: contactin-5 [Taeniopygia guttata]
          Length = 1099

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 164/617 (26%), Positives = 263/617 (42%), Gaps = 61/617 (9%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSD---RISQGNYGKSLIIKHVEFSDQG 100
           A R   V++ C   G P+P   W K +G   NPS    R SQ      L I +V+  D G
Sbjct: 311 AARGTTVKMECFALGNPVPTISWRKVNG--HNPSKARLRKSQA----VLEIPNVQLEDSG 364

Query: 101 SYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV 160
            Y C+  N  G    +   L V   P++  +         + + +ECKA+G P P   W+
Sbjct: 365 MYECKAENSRGR-NVFRGQLQVYTYPHWVEKLNDTQLDSGDQLRWECKATGKPRPTYRWL 423

Query: 161 HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
            NG P+    P  R ++    + I +   SD G Y C A N  G +Y    + +LA AP 
Sbjct: 424 KNGVPLW---PQSRIEMINGVLMIHSANVSDAGMYQCLAENKYGTIYASAELKILASAPT 480

Query: 221 --ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDV 277
             + +  K      G+ VV+ C+   +PKP + W    K L    R T+L  G L+I + 
Sbjct: 481 FPLNQMRKTIIVTKGQEVVIECKPEASPKPTITWKKGDKVLRENKRITVLPHGSLRILNA 540

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
           + +D G Y C   N  G+A+   S++VKE T I   P+  E+  G+S    C A+ D ++
Sbjct: 541 SKSDEGRYLCQGVNVFGSAEIIASVSVKEPTRIELTPKKVELTVGESIVLSCRALHDSTM 600

Query: 338 KLSIVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
            ++  W    +PIDFE E         Q++   L +     + +G+Y CR QT  D +  
Sbjct: 601 DVTFYWTLNGQPIDFEKEGGHFESIKAQASSADLMIRNILLMHAGRYGCRVQTAADTVSD 660

Query: 393 QATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQT------ 442
           +  L V+ P   P    +++ I    A +SW+P     SP SL      Y +Q       
Sbjct: 661 ETELLVRGP-PGPPGVVIVEEITDTTATLSWSPGADNHSPISL------YNLQARSPFSL 713

Query: 443 -WTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TP 500
            W       ++ +LI   G+  +    +  P  +   RV+A N    G PS     + T 
Sbjct: 714 GWQTVK---TVPDLI--SGDMESAMAVELNPWVEYEFRVVATNKIGTGDPSAPSRVIRTN 768

Query: 501 EGVPGTVQSLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLER 555
           E VP T  +  +   G      + W  V  E  +G   GY + ++    +G K     E+
Sbjct: 769 EAVPKTPPANVSGRSGRRHELVIAWEPVSEEFQSGEGFGYIVAFRPNGTRGWK-----EK 823

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEG 610
           +   SD +    +   + P T + + +  Y   GDG  S  +        P   P +V+ 
Sbjct: 824 MVTSSDASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSPIVVICSAEGEPTAAPIDVKA 883

Query: 611 RGSTPNNLVISWTAMPE 627
              + + ++++W  + E
Sbjct: 884 TSLSVSEILVAWKHIKE 900



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 160/663 (24%), Positives = 242/663 (36%), Gaps = 77/663 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  V+ SD GSY C V N V  A+  S    +            P   V  P  + A
Sbjct: 252 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPYVVTA 311

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   TV  EC A G P P I W   NG      P   R +     + I N++  D+G Y 
Sbjct: 312 ARGTTVKMECFALGNPVPTISWRKVNG----HNPSKARLRKSQAVLEIPNVQLEDSGMYE 367

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V  + P   E   D     G  +   C+  G P+P   W+ N 
Sbjct: 368 CKAENSRGRNVFRGQLQVYTY-PHWVEKLNDTQLDSGDQLRWECKATGKPRPTYRWLKNG 426

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH---ITDQ 313
             L       +  G L I     +D+G Y C A NK GT   S  L +        +   
Sbjct: 427 VPLWPQSRIEMINGVLMIHSANVSDAGMYQCLAENKYGTIYASAELKILASAPTFPLNQM 486

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +   V  GQ     C   + P  K +I W +G + +      R       SL +  +S+
Sbjct: 487 RKTIIVTKGQEVVIECKPEASP--KPTITWKKGDKVL--RENKRITVLPHGSLRILNASK 542

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVS----------- 422
            D G+Y C+        E  A+++V+ P         +++   +  V+S           
Sbjct: 543 SDEGRYLCQGVNVFGSAEIIASVSVKEPTRIELTPKKVELTVGESIVLSCRALHDSTMDV 602

Query: 423 ---W----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
              W     P+  +   GHF   K Q       +  IR +++         V        
Sbjct: 603 TFYWTLNGQPIDFEKEGGHFESIKAQA---SSADLMIRNILLMHAGRYGCRVQTAADTVS 659

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS--SAFYLKWVKPEQPNGV 533
           +   +L       GPP  +I     E +  T  +L   P     S   L  ++   P   
Sbjct: 660 DETELLVRGPP--GPPGVVIV----EEITDTTATLSWSPGADNHSPISLYNLQARSP--- 710

Query: 534 LMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-- 591
              + + +Q+VK          +P +      SA    L P  +Y   +    K G G  
Sbjct: 711 ---FSLGWQTVK---------TVPDLISGDMESAMAVELNPWVEYEFRVVATNKIGTGDP 758

Query: 592 -AESKYLF---YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTG 647
            A S+ +     VP   P NV GR    + LVI+W  + E   +   F Y + +R + T 
Sbjct: 759 SAPSRVIRTNEAVPKTPPANVSGRSGRRHELVIAWEPVSEEFQSGEGFGYIVAFRPNGT- 817

Query: 648 EAWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGS-IRELIVNKGESTTT 704
             W +  V     S+ +  ++  P   P+E+KV     + DG  S I  +   +GE T  
Sbjct: 818 RGWKEKMVTSSDASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSPIVVICSAEGEPTAA 877

Query: 705 EVD 707
            +D
Sbjct: 878 PID 880



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 157/677 (23%), Positives = 266/677 (39%), Gaps = 71/677 (10%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+GVP+ P  RI   N    L+I     SD G Y C   N  G   
Sbjct: 410  CKATGKPRPTYRWLKNGVPLWPQSRIEMIN--GVLMIHSANVSDAGMYQCLAENKYGTIY 467

Query: 115  SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
            + S +L +LA AP F +    + I   + + V  ECK    P+P I W    K + +   
Sbjct: 468  A-SAELKILASAPTFPLNQMRKTIIVTKGQEVVIECKPEASPKPTITWKKGDKVLRE--- 523

Query: 172  NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP-EITEAPKDEY 229
            N R  V P+  + I N  KSD G Y C   N  G    ++  +V    P  I   PK   
Sbjct: 524  NKRITVLPHGSLRILNASKSDEGRYLCQGVNVFGSA--EIIASVSVKEPTRIELTPKKVE 581

Query: 230  TVDGKTVVLTCRVFGAPKPEVN--WIHNQK----ELTGGRYTILE----TGDLKITDVAF 279
               G+++VL+CR       +V   W  N +    E  GG +  ++    + DL I ++  
Sbjct: 582  LTVGESIVLSCRALHDSTMDVTFYWTLNGQPIDFEKEGGHFESIKAQASSADLMIRNILL 641

Query: 280  ADSGEYTCFARNKLGTAQGSGSLTVK-----EHTHITDQPEDYEVEAGQSATFRCNAVSD 334
              +G Y C  +    T      L V+         I ++  D       +AT   +  +D
Sbjct: 642  MHAGRYGCRVQTAADTVSDETELLVRGPPGPPGVVIVEEITD------TTATLSWSPGAD 695

Query: 335  PSLKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
                +S+  L+   P        ++ P  +  +  S    + +     ++   A  ++  
Sbjct: 696  NHSPISLYNLQARSPFSLGWQTVKTVPDLISGDMESAMAVELNPWVEYEFRVVATNKIGT 755

Query: 390  IEAQATLTV-----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWT 444
             +  A   V      VP   P+N +  +     + V++W PVS +   G   GY V  + 
Sbjct: 756  GDPSAPSRVIRTNEAVPKTPPANVSG-RSGRRHELVIAWEPVSEEFQSGEGFGYIV-AFR 813

Query: 445  EKDGEGSIRELIVNKGESTTTEVDKFVPASKNF-ARVLAFNGAYNGPPSEIISFVTPEGV 503
                 G   +++ +   S     D+ VP    F  +V  +N   +GP S I+   + EG 
Sbjct: 814  PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSPIVVICSAEGE 873

Query: 504  PGTVQ-SLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
            P      ++A  L  S   + W   ++  G   G+++ Y   K  +     E++   ++ 
Sbjct: 874  PTAAPIDVKATSLSVSEILVAWKHIKESLGRPQGFEVGYW--KDMQQEEAAEKVK--TEG 929

Query: 563  TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLV--- 619
              +S  L GLE +T Y + +  Y  AG G  S  +     K+P +       P N++   
Sbjct: 930  NESSILLTGLEGNTLYHLTVRAYNAAGYGPPSTAVHAATKKSPPS-----QAPGNIMWIQ 984

Query: 620  ------ISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
                  + W  +  + + +    Y++ +R+    E  +   V++ +++  V+   P    
Sbjct: 985  DGSHVSLGWEPVRPLANESDVMGYKVLFRQ----EGQSNSQVIETQKTSAVVL-LPDVGV 1039

Query: 674  YEIKVVQTWTEKDGEGS 690
            Y I+V       DG  S
Sbjct: 1040 YIIEVCAVSEGGDGTAS 1056



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 145/387 (37%), Gaps = 38/387 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH-VEFSDQGSYTCEVS 107
           KKV L C   G P P   W ++G  IN            SLII +  E  D G Y C  +
Sbjct: 116 KKVSLNCQARGNPTPTYRWLRNGTEINIESDYRFSLIEGSLIISNPSEMKDSGQYQCLTT 175

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPEPEI--HWVHNGK 164
           N  G   S    L       F+      ++  E + V   C    L  PEI   WV N  
Sbjct: 176 NMFGSILSREAVLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPP-LHSPEIIYSWVFNEF 234

Query: 165 PISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------V 206
           P S    + RR +      + I  ++ SD G+Y C   N++                  V
Sbjct: 235 P-SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGV 293

Query: 207 YKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
             +    +  H P +  A +      G TV + C   G P P ++W              
Sbjct: 294 MGEYEPKIEVHFPYVVTAAR------GTTVKMECFALGNPVPTISWRKVNGHNPSKARLR 347

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
                L+I +V   DSG Y C A N  G     G L V  + H  ++  D ++++G    
Sbjct: 348 KSQAVLEIPNVQLEDSGMYECKAENSRGRNVFRGQLQVYTYPHWVEKLNDTQLDSGDQLR 407

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + C A   P  + +  WL+   P+  +S    +      L +  ++  D+G Y C A+ +
Sbjct: 408 WECKATGKP--RPTYRWLKNGVPLWPQSRIEMING---VLMIHSANVSDAGMYQCLAENK 462

Query: 387 LDFIEAQATLTVQVPLEAPSNFTLIQV 413
              I A A L +   L +   F L Q+
Sbjct: 463 YGTIYASAELKI---LASAPTFPLNQM 486



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 123/293 (41%), Gaps = 27/293 (9%)

Query: 113 AKSYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
           ++++  D SV   P F  EP+   F   +EE+ V+  C+A G P P   W+ NG  I+  
Sbjct: 85  SETFKHDESVDYGPVFVQEPDDIIFPTDSEEKKVSLNCQARGNPTPTYRWLRNGTEIN-I 143

Query: 170 PPNPRRKVGPNRITIEN-LRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
             + R  +    + I N     D+G Y C  TN  G +     V   A+    +   +  
Sbjct: 144 ESDYRFSLIEGSLIISNPSEMKDSGQYQCLTTNMFGSILSREAVLQFAYLGNFSGRTRSA 203

Query: 229 YTV-DGKTVVLTCR-VFGAPKPEVNWIHNQ----KELTGGRYTILETGDLKITDVAFADS 282
            +V +G+ VVL C     +P+   +W+ N+          R+   ETG+L I+ V  +D 
Sbjct: 204 VSVREGQGVVLMCSPPLHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDV 263

Query: 283 GEYTCFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATFRCNA 331
           G Y C  +N +  A+       LT++    + +     EV          G +    C A
Sbjct: 264 GSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPYVVTAARGTTVKMECFA 323

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           + +P   +S   + G  P    S+ R  +S    L +      DSG Y C+A+
Sbjct: 324 LGNPVPTISWRKVNGHNP----SKARLRKSQAV-LEIPNVQLEDSGMYECKAE 371



 Score = 47.0 bits (110), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 9/165 (5%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           RK  +  + ++V + C    +P P   W K    +  + RI+   +G SL I +   SD+
Sbjct: 487 RKTIIVTKGQEVVIECKPEASPKPTITWKKGDKVLRENKRITVLPHG-SLRILNASKSDE 545

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEI 157
           G Y C+  N  G A+  +  +SV       + P+ +     E++   C+A      +   
Sbjct: 546 GRYLCQGVNVFGSAEIIA-SVSVKEPTRIELTPKKVELTVGESIVLSCRALHDSTMDVTF 604

Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
           +W  NG+PI          + + +     + I N+     G YGC
Sbjct: 605 YWTLNGQPIDFEKEGGHFESIKAQASSADLMIRNILLMHAGRYGC 649


>gi|73996768|ref|XP_851830.1| PREDICTED: contactin-1 isoform 3 [Canis lupus familiaris]
          Length = 1018

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 188/727 (25%), Positives = 296/727 (40%), Gaps = 88/727 (12%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 241 PADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 298

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G+Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 299 NIQLEDEGTYECEAENNRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 354

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 355 TGKPIPTIRWLKNGYAYHKG------ELRLYDVTFEN-----AGMYQCIAENTHGTIYAN 403

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 404 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 463

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 464 WEDGSLEINNITRNDGGIYTCFAENNRGRANNTGTLVITDPTRIILAPINADITVGENAT 523

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ +W      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 524 MQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 583

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            AQT +D   A A L V+ P   P     I+ I A    ++W+  S          Y +Q
Sbjct: 584 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYTIQ 640

Query: 442 TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           T T    D + +  +  + +G          +P  +   RV+A N    G PS   + + 
Sbjct: 641 TKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIK 700

Query: 500 PEGVPGTVQSLEAIPLGSS--AFYLKWV--KPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
            +G    V   +    G S     + WV    E   G   GY + ++   G +   +   
Sbjct: 701 TDGAAPNVAPSDVGGGGGSNRELTITWVPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVT 760

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTP 615
            P   D      K   + PST +++ +  +   GDG         P+             
Sbjct: 761 NP---DTGRYVHKDETMRPSTAFQVKVKAFNNKGDG---------PY------------- 795

Query: 616 NNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVL----ANQPTF 671
                S TA+     +AP              EA  +  V     SE+ +      +   
Sbjct: 796 -----SLTAVINSAQDAP-------------SEAPTEVGVKVLSSSEISVHWEHVVEKIV 837

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
           + Y+I+    W   D E +   + V   E  +  ++  +P ++ F  V A N A  GPPS
Sbjct: 838 ESYQIRY---WAAHDKEAAAHRVQVTSQE-YSARLENLLPDTQYFVEVRACNSAGCGPPS 893

Query: 732 EIISFVT 738
           ++I   T
Sbjct: 894 DMIETFT 900



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 156/657 (23%), Positives = 249/657 (37%), Gaps = 85/657 (12%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 189 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTKPYPADIVV 246

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  I A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 247 QFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 303

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N+ G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 304 DEGTYECEAENNRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 362

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  GT   +  L +      
Sbjct: 363 RWLKN-----GYAY---HKGELRLYDVTFENAGMYQCIAENTHGTIYANAELKILALAPT 414

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   D SL 
Sbjct: 415 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 470

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC A+          TL +  P   + AP N  +    +A  +   S+
Sbjct: 471 INNITRNDGGIYTCFAENNRGRANNTGTLVITDPTRIILAPINADITVGENATMQCAASF 530

Query: 424 NPVSPQSLRGHFRGYKVQ-----------TWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
           +P    +    F GY +               + +GE  IR   +      T      V 
Sbjct: 531 DPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVD 590

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
            S   A ++                    G PG    L    + +++  L W +    + 
Sbjct: 591 NSSASADLVV------------------RGPPGPPGGLRIEDIRATSVALTWSRGSDNHS 632

Query: 533 VLMGYKIKYQSV-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
            +  Y I+ +++     K  K  P     P I +    +A+   L P  +Y   +     
Sbjct: 633 PISKYTIQTKTILSDDWKDAKTDP-----PII-EGNMEAARAVDLIPWMEYEFRVVATNT 686

Query: 588 AGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            G G  S      K     P   P +V G G +   L I+W  +    H   +F Y + +
Sbjct: 687 LGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWVPLSREYHYGNNFGYIVAF 746

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
           +  + GE W +  V +      V  ++ T +P   +++KV     + DG  S+  +I
Sbjct: 747 KPFD-GEEWKKVTVTNPDTGRYVHKDE-TMRPSTAFQVKVKAFNNKGDGPYSLTAVI 801



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 140/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   I+  SDR S    G +L+I + +   D G Y C  S
Sbjct: 60  KVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 117

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 118 NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 171

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 172 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 228

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 229 LIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 288

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 289 STSGAVLKIFNIQLEDEGTYECEAENNRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 348

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+       + E R      Y +T       ++G Y C A+ 
Sbjct: 349 YWPCVATGKPI--PTIRWLKNGYAY-HKGELRL-----YDVTFE-----NAGMYQCIAEN 395

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 396 THGTIYANAELKI 408



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   I     +    VG N +   
Sbjct: 47  PINTIYPE---ESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTS-DRYSMVGGNLVINN 102

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   +
Sbjct: 103 PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 162

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 163 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 222

Query: 299 SGSL---------TVKEH-THITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                        T K +   I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 223 FSKFIPLIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPV--PDIRWRKVLE 280

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 281 PMPSTAE---ISTSGAVLKIFNIQLEDEGTYECEAENNRGKDKHQARIYVQ 328



 Score = 43.5 bits (101), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+    ++V+ + +  V W  V  + +      Y+++ W   D E +   + V   
Sbjct: 808 PSEAPTEVG-VKVLSSSEISVHWEHVVEKIVES----YQIRYWAAHDKEAAAHRVQVTSQ 862

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GPPS++I   T +  P     + +     S +
Sbjct: 863 E-YSARLENLLPDTQYFVEVRACNSAGCGPPSDMIETFTKKAPPSQPPRIISSIRSGSRY 921

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYK+ Y+
Sbjct: 922 IITWDHVVALSNESTVTGYKVLYR 945


>gi|18858449|ref|NP_571521.1| contactin-2 precursor [Danio rerio]
 gi|4867989|gb|AAD31083.1|AF064799_1 transiently expressed axonal glycoprotein [Danio rerio]
          Length = 1040

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 182/706 (25%), Positives = 294/706 (41%), Gaps = 59/706 (8%)

Query: 26  ASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGN 84
           AS  + AP  +     +  AL  +  +L C     P+P+  W K DG+ + P  ++    
Sbjct: 231 ASPRKTAPNIRVRFPAETYALSGQTAQLECFAYRNPIPKIRWRKVDGI-LPP--KVGTSV 287

Query: 85  YGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET-- 142
            G  LII  + F D+G Y CEV N  G  +++   +SV A P +    + ++ +E E   
Sbjct: 288 DGPILIIPELNFDDEGMYECEVYNSEGR-ETHQGRVSVQAQPDWL---QVMSDSEVEISS 343

Query: 143 -VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATN 201
            + + C A+G P P I W+ NG  +       R +V   R+ I NL   D+G Y C A N
Sbjct: 344 ELQWSCAAAGKPRPTIRWLRNGHALIT---QDRVEVNNGRLKIANLALEDSGMYQCVAEN 400

Query: 202 SLGYVYKDVYVNVLAHAPEITEAPKDEYT--VDGKTVVLTCRVFGAPKPEVNWIHNQKEL 259
               +Y +  + V   AP+    P  +      G  V + C+   APKP + W    + L
Sbjct: 401 KHSTIYSNAELRVQVQAPDFRLNPVRKLVPAARGGQVKMECKPRAAPKPTLFWSRGTELL 460

Query: 260 TGG-RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYE 318
           T   R T+   G L I +++ AD G+YTCFA N LG A  +G L+V++ T IT  P + +
Sbjct: 461 TNSTRITVTPDGILWIYNISRADEGKYTCFAENYLGKANSTGHLSVRDATKITLAPSNAD 520

Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP----RFVQSNDY--SLTVTKSS 372
           +  G++AT +C+A  DP++ L+  W     P+D E EP    R ++  +    L +    
Sbjct: 521 INQGENATLQCHASHDPTMDLTFTWSLNGVPLDLE-EPNGHYRRMEGKETIGDLVIVNGQ 579

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDA------KKAVVSWNPV 426
              +G YTC AQT +D   A A L V+ P   P    +  V D        +   + +P+
Sbjct: 580 LSHAGTYTCTAQTVVDSAMASAKLVVRGPPGPPGGLVVTSVNDTSVELRWSRGYDNHSPI 639

Query: 427 SPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
               + G  R  +   W     + +  E     G + +  V    P      +V+A N  
Sbjct: 640 GKYVILG--RSSQTHDWKRMRTDPANIE-----GNAESARVIDLRPWMDYEFQVIASNIL 692

Query: 487 YNGPPSEIISFV-TPEGVPGTVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQ 542
            +G PS       T E  P    S      G+ +   + W  +  E  NG   GY + ++
Sbjct: 693 GSGEPSMPSPRAQTKEAAPTVAPSGLGGGGGNRNELIITWTPMAREYQNGDSFGYILAFR 752

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLA----GLEPSTKYRIHLAGYTKAGDGAESKYLF 598
                K G  +     +  P   S++       L     + + +  Y K G+G  S+   
Sbjct: 753 -----KQG--IPTWTVVKVPNVESSRYVYSNDSLTAYCPFEVRIKAYNKKGEGPFSQIAV 805

Query: 599 Y-----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI-FWRRHNTGEAWNQ 652
                  P  +P  +     T   + +SW  +  +  N     Y I +WR+H    A ++
Sbjct: 806 VHSAEEEPTVSPRWINATALTAFEIQVSWEPIQHLNINGVLRGYEIRYWRQHEREAAADR 865

Query: 653 DDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNK 698
                   +  V   +P    Y I V+   +   G  S R  ++ K
Sbjct: 866 VRTAGLENTARVTGLRPNTL-YHITVLAYNSAGTGPASPRTTVITK 910



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 170/728 (23%), Positives = 291/728 (39%), Gaps = 97/728 (13%)

Query: 33   PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
            P    V    EV + + +++  C   G P P   W ++G  +   DR+   N    L I 
Sbjct: 328  PDWLQVMSDSEVEI-SSELQWSCAAAGKPRPTIRWLRNGHALITQDRVEVNN--GRLKIA 384

Query: 93   HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKAS 150
            ++   D G Y C   N      S +     + AP F + P  + + AA    V  ECK  
Sbjct: 385  NLALEDSGMYQCVAENKHSTIYSNAELRVQVQAPDFRLNPVRKLVPAARGGQVKMECKPR 444

Query: 151  GLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT-IENLRKSDTGNYGCNATNSLGYVYKD 209
              P+P + W    + ++ +    R  V P+ I  I N+ ++D G Y C A N LG     
Sbjct: 445  AAPKPTLFWSRGTELLTNST---RITVTPDGILWIYNISRADEGKYTCFAENYLGKANST 501

Query: 210  VYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVN--WIHNQKELT----GGR 263
             +++V   A +IT AP +     G+   L C     P  ++   W  N   L      G 
Sbjct: 502  GHLSV-RDATKITLAPSNADINQGENATLQCHASHDPTMDLTFTWSLNGVPLDLEEPNGH 560

Query: 264  YTILE----TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH-----ITDQP 314
            Y  +E     GDL I +   + +G YTC A+  + +A  S  L V+         +    
Sbjct: 561  YRRMEGKETIGDLVIVNGQLSHAGTYTCTAQTVVDSAMASAKLVVRGPPGPPGGLVVTSV 620

Query: 315  EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFE---SEPRFVQSN--------- 362
             D  VE   S  +  ++     +   ++  R S+  D++   ++P  ++ N         
Sbjct: 621  NDTSVELRWSRGYDNHS----PIGKYVILGRSSQTHDWKRMRTDPANIEGNAESARVIDL 676

Query: 363  ----DYSLTVTKSSELDSGQYTC---RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVID 415
                DY   V  S+ L SG+ +    RAQT+    EA  T+       APS        +
Sbjct: 677  RPWMDYEFQVIASNILGSGEPSMPSPRAQTK----EAAPTV-------APSG-LGGGGGN 724

Query: 416  AKKAVVSWNPVSPQSLRGH-------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
              + +++W P++ +   G        FR   + TWT            V   +S T    
Sbjct: 725  RNELIITWTPMAREYQNGDSFGYILAFRKQGIPTWTVVKVPNVESSRYVYSNDSLTA--- 781

Query: 469  KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPG-TVQSLEAIPLGSSAFYLKW--V 525
             + P      R+ A+N    GP S+I    + E  P  + + + A  L +    + W  +
Sbjct: 782  -YCPFE---VRIKAYNKKGEGPFSQIAVVHSAEEEPTVSPRWINATALTAFEIQVSWEPI 837

Query: 526  KPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
            +    NGVL GY+I+Y      +      R   + +    +A++ GL P+T Y I +  Y
Sbjct: 838  QHLNINGVLRGYEIRYWRQHEREAAADRVRTAGLEN----TARVTGLRPNTLYHITVLAY 893

Query: 586  TKAGDGAESKYLFYV-----PFKNPDNVEGR--GSTPNNLVISWTAMPEIEHNAPHFKYR 638
              AG G  S     +     P + P NV  +  GS    + + W  +  +++ +    Y+
Sbjct: 894  NSAGTGPASPRTTVITKKPPPNRPPGNVSWKVDGSW---VTVRWDHVKSMDNESAVLGYK 950

Query: 639  IFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNK 698
            + ++     E  +   VL+  ++ + L   P    Y +  +++W +  G+G+  E IV++
Sbjct: 951  VLYKH----EGQSALKVLEKSKTSVKLP-LPKDNGYVVLEIRSWGD-GGDGAAHETIVSR 1004

Query: 699  GESTTTEV 706
               T   V
Sbjct: 1005 DSGTGMMV 1012



 Score = 47.0 bits (110), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 112/314 (35%), Gaps = 35/314 (11%)

Query: 124 AAPYFTVEPEFINAAE---EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN 180
           + P F  +P  +   E   E  VT  C+A   P     W  NG  IS A  +   +V  N
Sbjct: 32  SGPVFEEQPSSLIYPEGMPEGKVTLGCQARSSPAAVYRWRVNGTDISFAEESHYTQVAGN 91

Query: 181 RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLT 239
            +        D G+Y C A N  G +   V      +  +     +   TV +G    L 
Sbjct: 92  LVINNPQNGRDGGSYQCLAINRCGTIVSRVANLKFGYLRDFPPESRSPQTVHEGMGTFLA 151

Query: 240 CRVFGA-PKPEVNWIHNQ----KELTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKL 293
           C+     P     W  N+     +   GR+ + + TG+L + +    D+G Y CF    +
Sbjct: 152 CQPPAHYPALSYRWFINEFPNFIQPEAGRWFVSQVTGNLYLANARANDTGNYFCFTTINM 211

Query: 294 GTAQGS-GSLTVKEHTHITDQP-------------EDYEVEAGQSATFRCNAVSDPSLKL 339
             +  S  S  V+   H    P             E Y + +GQ+A   C A  +P  K+
Sbjct: 212 DVSTKSIFSKAVQLTVHPDASPRKTAPNIRVRFPAETYAL-SGQTAQLECFAYRNPIPKI 270

Query: 340 SIVWLRG----------SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
               + G            PI    E  F     Y   V  S   ++ Q     Q + D+
Sbjct: 271 RWRKVDGILPPKVGTSVDGPILIIPELNFDDEGMYECEVYNSEGRETHQGRVSVQAQPDW 330

Query: 390 IEAQATLTVQVPLE 403
           ++  +   V++  E
Sbjct: 331 LQVMSDSEVEISSE 344


>gi|345307132|ref|XP_001507473.2| PREDICTED: contactin-2-like [Ornithorhynchus anatinus]
          Length = 1377

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 171/629 (27%), Positives = 275/629 (43%), Gaps = 56/629 (8%)

Query: 45   ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
            AL  ++V L C   G P+P+  W +    ++P  + ++G    +L I +V F D+G+Y C
Sbjct: 498  ALAGQQVTLECFAFGNPVPRIKWRRVDGTLSP--QWAEGE--PTLQIANVGFEDEGTYEC 553

Query: 105  EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
            E  N  G   +    + V A P +        A     + + C A+G P P + W+ NG 
Sbjct: 554  EAENTKGR-DTVQGRIIVQAQPEWLKVISDTEADIGSDLRWTCAAAGKPRPTMRWLRNGD 612

Query: 165  PI-SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ SQA    R +V    +    L   D+G Y C A N  G +Y    + V A AP+   
Sbjct: 613  PLASQA----RLEVSGGELKFSKLALQDSGMYQCVAENKHGAIYASAELAVQALAPDFRL 668

Query: 224  APKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
             P         G  V++ C+   AP+  V W    + LT   R TI   G L + +++ +
Sbjct: 669  NPVKRLIPAARGGEVIIPCQPRSAPRAVVLWSKGTELLTNSSRVTITLDGTLILRNLSRS 728

Query: 281  DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            D G+YTCFA N +G A  +G+L+V++ T IT  P   +V  G++ T +C+A  DP++ L+
Sbjct: 729  DEGKYTCFAENFMGKANSTGTLSVRDATKITLAPSSADVNLGENLTLQCHASHDPTMDLT 788

Query: 341  IVWLRGSEPIDFESEP---RFVQSNDY--SLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
              W     PIDF+      R   + +    LT+  +    +G+YTC AQT +D     AT
Sbjct: 789  FTWTLDDSPIDFDKPDGHYRRASAKEAIGDLTIVNAQLRHAGKYTCMAQTVVDSAAEAAT 848

Query: 396  LTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGEGS-I 452
            L ++ P   P    +  + D     +SW+    +    H     Y +Q  T   G+   +
Sbjct: 849  LLIRGPPGPPGGVVVRDISDT-TVQLSWS----RGFDNHSPIAKYTIQARTLPAGQWKPV 903

Query: 453  RELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGVPGTV 507
            R   VN +G + T  V    P      RV+A N    G  +GP S+I    T E  P   
Sbjct: 904  RTEPVNIEGNAETARVLNLTPWMDYEFRVVASNILGTGEPSGPSSKI---RTKEAAPSVA 960

Query: 508  QSLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSV-----KGTKVGPLLERLPYI 559
             S  +   G+     + W  +  E  NG   GY + ++       + T+V    E L Y+
Sbjct: 961  PSGLSGGGGAPGELIINWTPMLREYQNGDGFGYLLSFRKQGSVDWRTTRVF-QAESLHYV 1019

Query: 560  SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEGRGST 614
                T       ++P T + + + GY + G+G ES           P   P  V  + + 
Sbjct: 1020 YRNET-------IQPYTPFEVKIRGYNRKGEGPESLTAIVHSAEEEPRVAPAKVTAKAAL 1072

Query: 615  PNNLVISWTAMPEIEHNAPHFKYRI-FWR 642
             + + ++W  +   + N     Y I +W+
Sbjct: 1073 ASEVDVTWEPVTRGDTNGVLLGYEIRYWK 1101



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 143/649 (22%), Positives = 244/649 (37%), Gaps = 98/649 (15%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W ++G P+    R+     G  L    +   D G Y C   N  G A 
Sbjct: 595  CAAAGKPRPTMRWLRNGDPLASQARLEVS--GGELKFSKLALQDSGMYQCVAENKHG-AI 651

Query: 115  SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
              S +L+V A AP F + P    I AA    V   C+    P   + W    + ++ +  
Sbjct: 652  YASAELAVQALAPDFRLNPVKRLIPAARGGEVIIPCQPRSAPRAVVLWSKGTELLTNS-- 709

Query: 172  NPRRKVGPNRITI--------ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
                    +R+TI         NL +SD G Y C A N +G       ++V   A +IT 
Sbjct: 710  --------SRVTITLDGTLILRNLSRSDEGKYTCFAENFMGKANSTGTLSV-RDATKITL 760

Query: 224  APKDEYTVDGKTVVLTCRVFGAPKPEVN--WIHNQKELT----GGRYTILET----GDLK 273
            AP       G+ + L C     P  ++   W  +   +      G Y         GDL 
Sbjct: 761  APSSADVNLGENLTLQCHASHDPTMDLTFTWTLDDSPIDFDKPDGHYRRASAKEAIGDLT 820

Query: 274  ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVS 333
            I +     +G+YTC A+  + +A  + +L ++            ++             S
Sbjct: 821  IVNAQLRHAGKYTCMAQTVVDSAAEAATLLIRGPPGPPGGVVVRDI-------------S 867

Query: 334  DPSLKLSIVWLRGSE---PI-DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            D +++LS  W RG +   PI  +  + R + +  +    T+   ++    T R      +
Sbjct: 868  DTTVQLS--WSRGFDNHSPIAKYTIQARTLPAGQWKPVRTEPVNIEGNAETARVLNLTPW 925

Query: 390  IEAQATLT----------------VQVPLEAPS---NFTLIQVIDAKKAVVSWNPVSPQS 430
            ++ +  +                 ++    APS   +          + +++W P+  + 
Sbjct: 926  MDYEFRVVASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELIINWTPMLREY 985

Query: 431  LRGHFRGYKVQTWTEKDGEGSIRELIVNKGEST--TTEVDKFVPASKNFARVLAFNGAYN 488
              G   GY +     K G    R   V + ES       +   P +    ++  +N    
Sbjct: 986  QNGDGFGYLLSF--RKQGSVDWRTTRVFQAESLHYVYRNETIQPYTPFEVKIRGYNRKGE 1043

Query: 489  GPPSEIISFV-----TPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKY 541
            GP S + + V      P   P  V +  A+   +S   + W  V     NGVL+GY+I+Y
Sbjct: 1044 GPES-LTAIVHSAEEEPRVAPAKVTAKAAL---ASEVDVTWEPVTRGDTNGVLLGYEIRY 1099

Query: 542  QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV- 600
                  +      R   +     T+A++ GL PSTKY I +  Y +AG G  S       
Sbjct: 1100 WKDGDKEAAADRVRTAGLD----TTARVTGLHPSTKYHITVRAYNRAGTGPASPSANVTT 1155

Query: 601  ----PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
                P + P N+    ST +++ I W  +  +   +P   Y++ +R+ +
Sbjct: 1156 MKPPPRRPPGNISWMFST-SSITIKWDPVVPLPDESPITGYKMLYRQDS 1203



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 131/326 (40%), Gaps = 24/326 (7%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGE------AKSYSIDLSVLAAPYFTVE-----PEFIN 136
           +L I     SD G+Y+C  ++ +        +K   ++L+      F+       P    
Sbjct: 438 NLYIARTNASDLGNYSCLATSHMDFTTKSVFSKFARLNLAAEDPRQFSPSIKARFPSETY 497

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + VT EC A G P P I W      +S     P+   G   + I N+   D G Y 
Sbjct: 498 ALAGQQVTLECFAFGNPVPRIKWRRVDGTLS-----PQWAEGEPTLQIANVGFEDEGTYE 552

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A N+ G       + V A  PE  +   D     G  +  TC   G P+P + W+ N 
Sbjct: 553 CEAENTKGRDTVQGRIIVQAQ-PEWLKVISDTEADIGSDLRWTCAAAGKPRPTMRWLRNG 611

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
             L       +  G+LK + +A  DSG Y C A NK G    S  L V+         P 
Sbjct: 612 DPLASQARLEVSGGELKFSKLALQDSGMYQCVAENKHGAIYASAELAVQALAPDFRLNPV 671

Query: 316 DYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
              + A  G      C   S P  +  ++W +G+E +   S  R   + D +L +   S 
Sbjct: 672 KRLIPAARGGEVIIPCQPRSAP--RAVVLWSKGTELLTNSS--RVTITLDGTLILRNLSR 727

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQ 399
            D G+YTC A+  +    +  TL+V+
Sbjct: 728 SDEGKYTCFAENFMGKANSTGTLSVR 753



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 67/304 (22%), Positives = 104/304 (34%), Gaps = 36/304 (11%)

Query: 126 PYFTVEP---EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
           P F  +P    F   + EE VT  C+A   P     W  NG  +   P +  + VG N +
Sbjct: 276 PIFEDQPISALFPEESREEKVTLACRARASPPATYRWKMNGTEMKLEPNSRYQLVGGNLV 335

Query: 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR 241
               ++  D G Y C A+N+LG V             E ++  +D   + +G  V+L C 
Sbjct: 336 ITNPVKAEDAGAYQCLASNTLGTVVSREAFLRFGFLQEFSKEERDPVRITEGWGVMLPCN 395

Query: 242 -------------VFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCF 288
                        +   P              G  +    TG+L I     +D G Y+C 
Sbjct: 396 PPAHYPGEKETFPILSFPFHSALXXXCGGFADGRHFVSQMTGNLYIARTNASDLGNYSCL 455

Query: 289 ARNKLGTAQGSGSLTVKEHTHITDQPEDYE------------VEAGQSATFRCNAVSDPS 336
           A + +     S            + P  +               AGQ  T  C A  +P 
Sbjct: 456 ATSHMDFTTKSVFSKFARLNLAAEDPRQFSPSIKARFPSETYALAGQQVTLECFAFGNPV 515

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            +  I W R    +D    P++ +  + +L +      D G Y C A+        Q  +
Sbjct: 516 PR--IKWRR----VDGTLSPQWAE-GEPTLQIANVGFEDEGTYECEAENTKGRDTVQGRI 568

Query: 397 TVQV 400
            VQ 
Sbjct: 569 IVQA 572


>gi|7959253|dbj|BAA96020.1| KIAA1496 protein [Homo sapiens]
          Length = 920

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 167/625 (26%), Positives = 267/625 (42%), Gaps = 48/625 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P   S +I    +   L I + +  D GSY 
Sbjct: 131 AAKGSTVKLECFALGNPIPQINWRRSDGLPF--SSKIKLRKFSGVLEIPNFQQEDAGSYE 188

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    + +  A E+++ +EC+ASG P+P   W+ NG
Sbjct: 189 CIAENSRGKNVARG-RLTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYRWLKNG 247

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +       R ++    +TI NL  +D+G + C A N  G VY    + V+A AP+ ++
Sbjct: 248 AALVL---EERTQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSK 304

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
            P  +      G  V L C+   +P+   +W      +    R ++L  G LKI +V  A
Sbjct: 305 NPMKKLVQVQVGSLVSLDCKPRASPRALSSWKKGDVSVQEHERISLLNDGGLKIANVTKA 364

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L + 
Sbjct: 365 DAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDII 424

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 425 FTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADL 484

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
            V+     P N  + ++ D   A +SW       +PV   S++       G++  T    
Sbjct: 485 IVRGSPGPPENVKVDEITDT-TAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT---- 539

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 540 ----TVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 593

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S      GS S   + W  V  E  NG   GY + ++ +    V   ++ +    D 
Sbjct: 594 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPL---GVTTWIQTVVTSPDT 650

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y + +  Y   G+G  S    +F     P   P  V     + + 
Sbjct: 651 PRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSE 710

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FW 641
           + +SW  +P    N     Y + +W
Sbjct: 711 IEVSWNTIPWKLSNGHLLGYEVRYW 735



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 161/637 (25%), Positives = 246/637 (38%), Gaps = 86/637 (13%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V  A+       ++           P   V+ PE + AA
Sbjct: 73  LYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 132

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P S      + +     + I N ++ D G+Y C
Sbjct: 133 KGSTVKLECFALGNPIPQINWRRSDGLPFSS---KIKLRKFSGVLEIPNFQQEDAGSYEC 189

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K+V    L +   P   +  KD       ++   CR  G PKP   W+ N
Sbjct: 190 IAENSRG---KNVARGRLTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYRWLKN 246

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
              L     T +E G L I++++  DSG + C A NK G    S  L  V      +  P
Sbjct: 247 GAALVLEERTQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNP 306

Query: 315 ED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
                +V+ G   +  C   + P    S  W +G   +  +   R    ND  L +   +
Sbjct: 307 MKKLVQVQVGSLVSLDCKPRASPRALSS--WKKGD--VSVQEHERISLLNDGGLKIANVT 362

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAV-----VSWN 424
           + D+G YTC A+ +         L V  P     APSN      +   ++V     V  +
Sbjct: 363 KADAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSNMD----VSVGESVILPCQVQHD 418

Query: 425 PVSPQSLRGHFRGY-----KVQTWTEKDGEGSIRELIVNKGE---------STTTEVDKF 470
           P+       +F G      K  +  EK G  S  +L++   +            T VD  
Sbjct: 419 PLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSV 478

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
             A+    R                      G PG  ++++   +  +   L W + +  
Sbjct: 479 SSAADLIVR----------------------GSPGPPENVKVDEITDTTAQLSWKEGKDN 516

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           +  ++ Y I  Q+     VG   +  +P + D  T +A +  L P  +Y   +    K G
Sbjct: 517 HSPVISYSI--QARTPFSVGWQTVTTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIG 574

Query: 590 DGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  S      +    VP   P  V G G + + LVI+W  +PE   N   F Y + +R 
Sbjct: 575 GGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRP 634

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
                 W Q  V        V  N+    + PYE+KV
Sbjct: 635 LGV-TTWIQTVVTSPDTPRYVFRNESIVPYSPYEVKV 670



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 166/727 (22%), Positives = 274/727 (37%), Gaps = 106/727 (14%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +   +R    N   +L I ++  +D G + C   N  G   
Sbjct: 231 CRASGKPKPSYRWLKNGAALVLEERTQIEN--GALTISNLSVTDSGMFQCIAENKHGLVY 288

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           S S +L V+A AP F+  P  + +       V+ +CK    P     W      + +   
Sbjct: 289 S-SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRALSSWKKGDVSVQEHER 347

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
                 G   + I N+ K+D G Y C A N  G      ++ V+     IT AP +    
Sbjct: 348 ISLLNDG--GLKIANVTKADAGTYTCMAENQFGKANGTTHL-VVTEPTRITLAPSNMDVS 404

Query: 232 DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
            G++V+L C+V   P  ++   W  N             E  GG      +GDL I ++ 
Sbjct: 405 VGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGS----SSGDLMIRNIQ 460

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
              SG+Y C  +  + +   +  L V+                G     + + ++D + +
Sbjct: 461 LKHSGKYVCMVQTGVDSVSSAADLIVRG-------------SPGPPENVKVDEITDTTAQ 507

Query: 339 LSIVWLRG----SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD------ 388
           LS  W  G    S  I +  + R   S  +  TVT   E+  G+       EL+      
Sbjct: 508 LS--WKEGKDNHSPVISYSIQARTPFSVGWQ-TVTTVPEVIDGKTHTATVVELNPWVEYE 564

Query: 389 --------------FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
                          + ++   T +   E P +          + V++W+PV  +   G 
Sbjct: 565 FRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGE 624

Query: 435 -------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
                  FR   V TW +           V + ES        VP S    +V  +N   
Sbjct: 625 GFGYVVAFRPLGVTTWIQTVVTSPDTPRYVFRNES-------IVPYSPYEVKVGVYNNKG 677

Query: 488 NGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSV 544
            GP S + +  + E  P    S + A  L SS   + W  +  +  NG L+GY+++Y + 
Sbjct: 678 EGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNG 737

Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
            G +      ++        TSA+L GL+ +  Y   +  Y  AG G  S  +       
Sbjct: 738 GGKEESSSKMKVA----GNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSATVNVTTKKT 793

Query: 601 -PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
            P + P NV    +T   ++++W  +  +E+ +    Y++F+R  +     N   VL+  
Sbjct: 794 PPSQPPGNVVWN-ATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQ----NNVQVLNTN 848

Query: 660 Q--SELVLANQPTFQPYEIKVVQTWTEKDGEGS----IRELIVNKGESTTTEVDKFVPAS 713
           +  +ELVL   P  + Y I+V  T    DG  S    I  +       +T+ +    P S
Sbjct: 849 KTSAELVL---PIKEDYIIEVKATTDGGDGTSSEQIRIPRITSMDARGSTSAISNVHPMS 905

Query: 714 KNFARVL 720
                VL
Sbjct: 906 SYMPIVL 912



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 28/186 (15%)

Query: 232 DGKTVVLTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADS 282
           +G+ VVL C     P P        WI N+     E    R+   ETG L I+ V  +D 
Sbjct: 28  EGQGVVLLC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDV 83

Query: 283 GEYTCFARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNA 331
           G YTC   + +  A+  GS   L ++    + +         PE      G +    C A
Sbjct: 84  GNYTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFA 143

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           + +P  +++  W R S+ + F S+ +  + +   L +    + D+G Y C A+       
Sbjct: 144 LGNPIPQIN--WRR-SDGLPFSSKIKLRKFSGV-LEIPNFQQEDAGSYECIAENSRGKNV 199

Query: 392 AQATLT 397
           A+  LT
Sbjct: 200 ARGRLT 205


>gi|117938277|ref|NP_032805.2| contactin-3 precursor [Mus musculus]
 gi|408360027|sp|Q07409.2|CNTN3_MOUSE RecName: Full=Contactin-3; AltName: Full=Brain-derived
           immunoglobulin superfamily protein 1; Short=BIG-1;
           AltName: Full=Plasmacytoma-associated neuronal
           glycoprotein; Flags: Precursor
 gi|146327723|gb|AAI41427.1| Contactin 3 [synthetic construct]
 gi|148666969|gb|EDK99385.1| contactin 3 [Mus musculus]
          Length = 1028

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 167/626 (26%), Positives = 265/626 (42%), Gaps = 38/626 (6%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V L C   G P+PQ  W + DG+P    ++I    +   L I++ +  D GSY 
Sbjct: 239 AAKGSTVRLECFALGNPVPQINWRRSDGMPF--PNKIKLRKFNGMLEIQNFQQEDTGSYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A PY+      +  A E+++ +EC+ASG P+P   W+ NG
Sbjct: 297 CIAENSRGKNVARG-RLTYYAKPYWLQLLRDVEIAVEDSLYWECRASGKPKPSYRWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +       R ++    +TI NL  +D+G + C A N  G +Y    + V+A AP+ + 
Sbjct: 356 DALVL---EERIQIENGALTITNLNVTDSGMFQCIAENKHGLIYSSAELKVVASAPDFSR 412

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
            P  +      G  V+L C+   +P+    W      +    R + L  G LKI +V  A
Sbjct: 413 NPMKKMVQVQVGSLVILDCKPRASPRALSFWKKGDMMVREQARVSFLNDGGLKIMNVTKA 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A G+  L V E T I   P + +V  G+S    C    DP L + 
Sbjct: 473 DAGTYTCTAENQFGKANGTTHLVVTEPTRIILAPSNMDVAVGESVILPCQVQHDPLLDIM 532

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 533 FAWYFNGALTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAAEL 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKD-GEGSIR 453
            V+     P N  + ++ D   A +SW     +    H     Y VQ  T    G  S+R
Sbjct: 593 IVRGSPGPPENVKVDEITDT-TAQLSWT----EGTDSHSPVISYAVQARTPFSVGWQSVR 647

Query: 454 ELI-VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLE 511
            +  V  G++ T  V +  P  +   R++A N    G PS     V T E  P    S  
Sbjct: 648 TVPEVIDGKTHTATVVELNPWVEYEFRIVASNKIGGGEPSLPSEKVRTEEAAPEIAPSEV 707

Query: 512 AIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
           +   GS S   + W  V  E  NG   GY + ++ +    V   ++ +    D      +
Sbjct: 708 SGGGGSRSELVITWDPVPEELQNGGGFGYVVAFRPL---GVTTWIQTVVTSPDNPRYVFR 764

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNNLVISWT 623
              + P + Y + +  Y   G+G  S    +F     P   P ++     + + + +SW 
Sbjct: 765 NESIVPFSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVSWN 824

Query: 624 AMPEIEHNAPHFKYRI-FWRRHNTGE 648
            +P    N     Y + +W  +N GE
Sbjct: 825 TIPWKLSNGHLLGYEVRYW--NNGGE 848



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 157/625 (25%), Positives = 246/625 (39%), Gaps = 62/625 (9%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V   +       ++           P   V+ PE + AA
Sbjct: 181 LYIAKVEPSDVGNYTCVVTSTVTNTRVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 240

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P    P   + +     + I+N ++ DTG+Y C
Sbjct: 241 KGSTVRLECFALGNPVPQINWRRSDGMPF---PNKIKLRKFNGMLEIQNFQQEDTGSYEC 297

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K+V    L +   P   +  +D       ++   CR  G PKP   W+ N
Sbjct: 298 IAENSRG---KNVARGRLTYYAKPYWLQLLRDVEIAVEDSLYWECRASGKPKPSYRWLKN 354

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
              L       +E G L IT++   DSG + C A NK G    S  L  V      +  P
Sbjct: 355 GDALVLEERIQIENGALTITNLNVTDSGMFQCIAENKHGLIYSSAELKVVASAPDFSRNP 414

Query: 315 --EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
             +  +V+ G      C   + P   LS  W +G   +  ++   F+  ND  L +   +
Sbjct: 415 MKKMVQVQVGSLVILDCKPRASPR-ALSF-WKKGDMMVREQARVSFL--NDGGLKIMNVT 470

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQ 429
           + D+G YTC A+ +         L V  P   + APSN   + V   +  ++        
Sbjct: 471 KADAGTYTCTAENQFGKANGTTHLVVTEPTRIILAPSN---MDVAVGESVILPCQVQHDP 527

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
            L   F  Y     T+   +GS  E +   G S+   + + +    +   V       + 
Sbjct: 528 LLDIMFAWYFNGALTDFKKDGSHFEKV--GGSSSGDLMIRNIQLKHSGKYVCMVQTGVDS 585

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK--------Y 541
             S     V   G PG  ++++   +  +   L W +    +  ++ Y ++        +
Sbjct: 586 VSSAAELIV--RGSPGPPENVKVDEITDTTAQLSWTEGTDSHSPVISYAVQARTPFSVGW 643

Query: 542 QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------K 595
           QSV+          +P + D  T +A +  L P  +Y   +    K G G  S      +
Sbjct: 644 QSVR---------TVPEVIDGKTHTATVVELNPWVEYEFRIVASNKIGGGEPSLPSEKVR 694

Query: 596 YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDV 655
                P   P  V G G + + LVI+W  +PE   N   F Y + +R       W Q  V
Sbjct: 695 TEEAAPEIAPSEVSGGGGSRSELVITWDPVPEELQNGGGFGYVVAFRPLGV-TTWIQTVV 753

Query: 656 LDWRQSELVLANQPT--FQPYEIKV 678
                   V  N+    F PYE+KV
Sbjct: 754 TSPDNPRYVFRNESIVPFSPYEVKV 778



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 149/371 (40%), Gaps = 30/371 (8%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           +KK+ L C   G P P   W  +G  I+ S D   + N G  ++I      D GSY C  
Sbjct: 43  DKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLNGGNLIVINPNRNWDTGSYQCFA 102

Query: 107 SNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVH 161
           +N +G   S    L       F T     ++  E + V   C   G P    E    WV 
Sbjct: 103 TNSLGTIVSREAKLQFAYLENFKTRMRSTVSVREGQGVVLLC---GPPPHSGELSYAWVF 159

Query: 162 NGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LG----YVYKD 209
           N  P S    + RR V      + I  +  SD GNY C  T++      LG     V + 
Sbjct: 160 NEYP-SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNTRVLGSPTPLVLRS 218

Query: 210 VYVNVLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE 268
             V +  + P+I  + P+      G TV L C   G P P++NW  +       +  + +
Sbjct: 219 DGV-MGEYEPKIEVQFPETLPAAKGSTVRLECFALGNPVPQINWRRSDGMPFPNKIKLRK 277

Query: 269 -TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
             G L+I +    D+G Y C A N  G     G LT     +      D E+    S  +
Sbjct: 278 FNGMLEIQNFQQEDTGSYECIAENSRGKNVARGRLTYYAKPYWLQLLRDVEIAVEDSLYW 337

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  K S  WL+  + +  E     +Q  + +LT+T  +  DSG + C A+ + 
Sbjct: 338 ECRASGKP--KPSYRWLKNGDALVLEER---IQIENGALTITNLNVTDSGMFQCIAENKH 392

Query: 388 DFIEAQATLTV 398
             I + A L V
Sbjct: 393 GLIYSSAELKV 403



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 164/729 (22%), Positives = 277/729 (37%), Gaps = 106/729 (14%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  +   +RI   N   +L I ++  +D G + C   N  G   
Sbjct: 339  CRASGKPKPSYRWLKNGDALVLEERIQIEN--GALTITNLNVTDSGMFQCIAENKHGLIY 396

Query: 115  SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
            S S +L V+A AP F+  P  + +       V  +CK    P     W      + +   
Sbjct: 397  S-SAELKVVASAPDFSRNPMKKMVQVQVGSLVILDCKPRASPRALSFWKKGDMMVREQAR 455

Query: 172  NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
                  G   + I N+ K+D G Y C A N  G      ++ V+     I  AP +    
Sbjct: 456  VSFLNDG--GLKIMNVTKADAGTYTCTAENQFGKANGTTHL-VVTEPTRIILAPSNMDVA 512

Query: 232  DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
             G++V+L C+V   P  ++   W  N             E  GG      +GDL I ++ 
Sbjct: 513  VGESVILPCQVQHDPLLDIMFAWYFNGALTDFKKDGSHFEKVGGS----SSGDLMIRNIQ 568

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
               SG+Y C  +  + +   +  L V+        PE+ +V+           ++D + +
Sbjct: 569  LKHSGKYVCMVQTGVDSVSSAAELIVRGSP---GPPENVKVDE----------ITDTTAQ 615

Query: 339  LSIVWLRGSEP----IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
            LS  W  G++     I +  + R   S  +    T    +D   +T        ++E + 
Sbjct: 616  LS--WTEGTDSHSPVISYAVQARTPFSVGWQSVRTVPEVIDGKTHTATVVELNPWVEYEF 673

Query: 395  TLTVQVPL---------------EAPSNFTLIQVIDA----KKAVVSWNPVSPQSLRG-- 433
             +     +               EA       +V        + V++W+PV P+ L+   
Sbjct: 674  RIVASNKIGGGEPSLPSEKVRTEEAAPEIAPSEVSGGGGSRSELVITWDPV-PEELQNGG 732

Query: 434  ------HFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
                   FR   V TW +           V + ES        VP S    +V  +N   
Sbjct: 733  GFGYVVAFRPLGVTTWIQTVVTSPDNPRYVFRNES-------IVPFSPYEVKVGVYNNKG 785

Query: 488  NGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSV 544
             GP S + +  + E  P    S + A  L SS   + W  +  +  NG L+GY+++Y + 
Sbjct: 786  EGPFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNN 845

Query: 545  KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
             G +      ++        TSA L GL+ +  Y   +  Y  AG G  S  +       
Sbjct: 846  GGEEESSRKVKVA----GNQTSAVLRGLKSNLAYYTAVRAYNSAGAGPFSATVNATTKKT 901

Query: 601  -PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
             P + P NV    +T   ++++W  +  +E+ +    Y++F+R  +     N   VL+  
Sbjct: 902  PPSQPPGNVVWN-ATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQ----NNVHVLNTN 956

Query: 660  Q--SELVLANQPTFQPYEIKVVQTWTEKDGEGS----IRELIVNKGESTTTEVDKFVPAS 713
            +  +EL+L   P  + Y I+V  T    DG  S    I  +       +T+ +    P S
Sbjct: 957  KTSAELLL---PIKEDYIIEVKATTDGGDGTSSEQIRIPRITSMDARGSTSAISNIHPLS 1013

Query: 714  KNFARVLAF 722
               + +L F
Sbjct: 1014 GYMSVLLFF 1022



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 124/300 (41%), Gaps = 32/300 (10%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +E++ +T  C+A G P P   W  NG  I  +  +  +  G
Sbjct: 22  LLQGPVFIKEPSNSIFPVDSEDKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLNG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N I I   R  DTG+Y C ATNSLG +         A+        +   +V +G+ VV
Sbjct: 82  GNLIVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTRMRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        W+ N+     E    R+   ETG L I  V  +D G YTC 
Sbjct: 142 LLC----GPPPHSGELSYAWVFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCV 197

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
             + +   +  GS   L ++    + +         PE      G +    C A+ +P  
Sbjct: 198 VTSTVTNTRVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVRLECFALGNPVP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +++  W R S+ + F ++ +  + N   L +    + D+G Y C A+       A+  LT
Sbjct: 258 QIN--WRR-SDGMPFPNKIKLRKFNGM-LEIQNFQQEDTGSYECIAENSRGKNVARGRLT 313


>gi|157909807|ref|NP_001103219.1| contactin-4 isoform 1 precursor [Mus musculus]
 gi|55976372|sp|Q69Z26.2|CNTN4_MOUSE RecName: Full=Contactin-4; AltName: Full=Brain-derived
           immunoglobulin superfamily protein 2; Short=BIG-2;
           Flags: Precursor
          Length = 1026

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 189/733 (25%), Positives = 300/733 (40%), Gaps = 112/733 (15%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+P  +W + DG PI    R  + N    L I + +  D GSY 
Sbjct: 237 AEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGSYE 294

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P +      I+ A EE+V +ECKA+G P+P   W+ NG
Sbjct: 295 CVAENSRGKNVAKG-QLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNG 353

Query: 164 KPISQAPPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
            P+       R ++    G   ITI NL  SD G Y C A N  G ++    ++V+A +P
Sbjct: 354 DPLLT-----RDRIQIEQGTLNITIVNL--SDAGMYQCVAENKHGVIFSSAELSVIAESP 406

Query: 220 EITEAPKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITD 276
           + +       T+   G  VV+ C+   +P+P   W   ++ L    R TI E G+L+I +
Sbjct: 407 DFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIIN 466

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
           V  +D+G YTC A N  GTA  +G++ VK+ T +   P   +V  G+S    C    D S
Sbjct: 467 VTKSDAGSYTCIATNHFGTASSTGNVIVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHS 526

Query: 337 LKLSIVWLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           L +   W      IDF+ +         Q +   L +       +G+Y C  QT +D + 
Sbjct: 527 LDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLS 586

Query: 392 AQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK- 446
             A L V+ P   P   T+ ++ D   A +SW P     SP ++      Y +Q  T   
Sbjct: 587 VAADLIVRGPPGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFS 639

Query: 447 ---DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EI 494
                  ++ +L+   G++ T  V    P  +   R +A N    G PS         E 
Sbjct: 640 VGWQAVNTVPDLV--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEA 697

Query: 495 ISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPL 552
           +  VTP  V G   S        S   + W  V  E  NG   GY + ++       G +
Sbjct: 698 LPEVTPANVSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFR-----PHGKM 745

Query: 553 LERLPYI--SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNP 605
           +  L  +  +D +    +   + P + + + +  +   G+G  S   L Y     P K P
Sbjct: 746 IWMLTVLASADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTLVYSAEEEPTKPP 805

Query: 606 DNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVL 665
            ++  R  +  ++ + W A P                                     + 
Sbjct: 806 ASIFARSLSATDIEVFW-ASP-------------------------------------IG 827

Query: 666 ANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 725
            N+   Q YE+K    W   D E + ++ I   G  T+T++     ++     V A+N A
Sbjct: 828 KNRGRIQGYEVKY---WRHDDKEENAKK-IRTVGNQTSTKITNLKGSALYHLSVKAYNSA 883

Query: 726 YNGPPSEIISFVT 738
             GP S  ++  T
Sbjct: 884 GTGPSSATVNVTT 896



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 176/687 (25%), Positives = 260/687 (37%), Gaps = 103/687 (14%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V+ PE + A
Sbjct: 178 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPA 237

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
            +  TV  EC A G P P I W   +GKPI++     RR      + I N ++ D G+Y 
Sbjct: 238 EKGTTVKLECFALGNPVPTILWRRADGKPIAR---KARRHKSNGILEIPNFQQEDAGSYE 294

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P   +   D +    ++V   C+  G PKP   W+ N 
Sbjct: 295 CVAENSRGKNVAKGQLTFYAQ-PNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNG 353

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
             L       +E G L IT V  +D+G Y C A NK G    S  L+V     I + P+ 
Sbjct: 354 DPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSV-----IAESPDF 408

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  +    W +G E I  E+E R   S D +L +
Sbjct: 409 SRTLLKRVTLVKVGGEVVIECKPKASP--RPVYTWRKGRE-ILRENE-RITISEDGNLRI 464

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
              ++ D+G YTC A        +   + V+ P +     + + V   +  V+       
Sbjct: 465 INVTKSDAGSYTCIATNHFGTASSTGNVIVKDPTKVMVPPSSMDVTVGESIVLPCQVTHD 524

Query: 429 QSLRGHFRGYKVQTWT--------EKD--------GEGSIRELIVNKGE---------ST 463
            SL   F      TWT        +KD        G+ S  +L++   +           
Sbjct: 525 HSLDIVF------TWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMV 578

Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYL 522
            T VDK   A+    R         GPP    +    E    T Q S    P   S   +
Sbjct: 579 QTSVDKLSVAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITM 629

Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
             ++   P      + + +Q+V           +P + D  T +A + GL P  +Y    
Sbjct: 630 YVIQARTP------FSVGWQAVN---------TVPDLVDGKTFTATVVGLNPWVEYEFRT 674

Query: 583 AGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
                 G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F 
Sbjct: 675 VAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFG 734

Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL 694
           Y + +R H     W    +     S  V  N+    F P+E+KV     + +G  S   L
Sbjct: 735 YVVAFRPHGK-MIWMLTVLASADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTL 793

Query: 695 IVNKGESTTTEVDKFVPASKNFARVLA 721
           + +  E  T       P +  FAR L+
Sbjct: 794 VYSAEEEPTK------PPASIFARSLS 814



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 141/369 (38%), Gaps = 30/369 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  ++            SL+I +  +  D G+Y C  +
Sbjct: 44  KKVKLSCEVKGNPKPHIRWKINGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQCIAT 103

Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVHN 162
           N  G   S    L       F T     ++    + +   C   G P    E    W+ N
Sbjct: 104 NSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLC---GPPPHSGELSYAWIFN 160

Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN- 213
             P  Q   + RR V      + I  + KSD GNY C  TN+      LG     +  N 
Sbjct: 161 EYPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRND 217

Query: 214 --VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILET 269
             +  + P+I  + P+      G TV L C   G P P + W   + K +          
Sbjct: 218 GVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSN 277

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I +    D+G Y C A N  G     G LT     +      D  V   +S  + C
Sbjct: 278 GILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWEC 337

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   P  K +  WL+  +P+        +Q    +L +T  +  D+G Y C A+ +   
Sbjct: 338 KANGRP--KPTYRWLKNGDPLLTRDR---IQIEQGTLNITIVNLSDAGMYQCVAENKHGV 392

Query: 390 IEAQATLTV 398
           I + A L+V
Sbjct: 393 IFSSAELSV 401



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 117/303 (38%), Gaps = 34/303 (11%)

Query: 119 DLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D   L  P F  EP    F   +EE+ V   C+  G P+P I W  NG  +     + R 
Sbjct: 19  DDYTLHGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKINGTDVDIG-MDFRY 77

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            V    + I N  K+ D G Y C ATNS G +         A+        +   +V  G
Sbjct: 78  SVVDGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRG 137

Query: 234 KTVVLTCRVFGAPKPEVN-----WIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYT 286
           + +VL C     P P        WI N+        R+   ETG+L I  V  +D G YT
Sbjct: 138 QGMVLLC----GPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYT 193

Query: 287 CFARNK------LG-----TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           C   N       LG       +  G +   E       PE    E G +    C A+ +P
Sbjct: 194 CVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNP 253

Query: 336 SLKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
               +I+W R   +PI    + R  +SN   L +    + D+G Y C A+       A+ 
Sbjct: 254 V--PTILWRRADGKPI--ARKARRHKSNGI-LEIPNFQQEDAGSYECVAENSRGKNVAKG 308

Query: 395 TLT 397
            LT
Sbjct: 309 QLT 311



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 21/192 (10%)

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            RG  +GY+V+ W   D E + ++ I   G  T+T++     ++     V A+N A  GP 
Sbjct: 830  RGRIQGYEVKYWRHDDKEENAKK-IRTVGNQTSTKITNLKGSALYHLSVKAYNSAGTGPS 888

Query: 492  SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
            S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 889  SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNR 944

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
             +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P  + 
Sbjct: 945  QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIPKISN 994

Query: 606  DNVEGRGSTPNN 617
                G G++ +N
Sbjct: 995  SYARGSGASTSN 1006


>gi|114585170|ref|XP_516244.2| PREDICTED: contactin-6 isoform 2 [Pan troglodytes]
          Length = 1028

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 182/715 (25%), Positives = 303/715 (42%), Gaps = 76/715 (10%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    + S+      L I + +  D+G Y 
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQ--AILEIPNFQQEDEGFYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C  SN  G   +    L   A P +  + +    +  + + +ECKASG P P   W+ NG
Sbjct: 297 CIASNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDNLLWECKASGKPNPWYTWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++   P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 356 ERLN---PEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSK 412

Query: 224 AP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
           +P  K  +   G  +V+ C+  G P+  ++W    + L    R  +LE G LKI ++  +
Sbjct: 413 SPVKKKSFVQVGGDIVIGCKPNGFPRAAISWKRGTETLRQSKRVFLLEDGSLKIYNITRS 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ GTA+ +GSL VKE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 473 DAGSYTCIATNQFGTAKNTGSLIVKERTVITVPPSKMDVTVGESIVLPCQVSHDPSIEVV 532

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            VW    + ID +       R    +   L +       SG+Y C  QT L+ + A A +
Sbjct: 533 FVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADI 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW    P +     + + +QT T          ++
Sbjct: 593 IVRGPPGPPEDVQ-VEDISSTTSQLSWR-AGPDN-NSPIQIFTIQTRTPFSVGWQAVATV 649

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA 512
            E++   G++    V    P  +   RV+A N    G PSE    +  +     V  +  
Sbjct: 650 PEIL--NGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNI 707

Query: 513 IPLGS--SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
              G   S   + W  +  E  NG   GY I ++ V  T      E++  + + +    +
Sbjct: 708 HGGGGSRSELVITWESIPEELQNGEGFGYIIMFRPVGSTTWSK--EKVSSV-ESSRFVYR 764

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS-----TPNNLVISWT 623
              + P + + + +  Y   G+G+ S        ++   +  RG+     + + + +SW 
Sbjct: 765 NESIIPLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSLQSFSASEMEVSWN 824

Query: 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWT 683
           A+                       AWN       R +  VL        YE   V  WT
Sbjct: 825 AI-----------------------AWN-------RNTGRVLG-------YE---VLYWT 844

Query: 684 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           +   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S  ++  T
Sbjct: 845 DDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGTGPSSPPVNVTT 898



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 163/660 (24%), Positives = 258/660 (39%), Gaps = 87/660 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC ++N   EA+      SV   P   V+                
Sbjct: 180 NLYIAKVEPSDVGNYTCFITNK--EAQR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 232

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ +V  EC A G P P+I W   +G P+   P   +       + I N ++
Sbjct: 233 FPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPL---PGKVKYSKSQAILEIPNFQQ 289

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A+N  G       + +    PE  +  ++ Y      ++  C+  G P P 
Sbjct: 290 EDEGFYECIASNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDNLLWECKASGKPNPW 348

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L       +E G L IT +  +DSG Y C A NK      +  L V     
Sbjct: 349 YTWLKNGERLNPEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAP 408

Query: 309 HITDQPEDYE--VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P   +  V+ G      C     P  + +I W RG+E +      R     D SL
Sbjct: 409 DFSKSPVKKKSFVQVGGDIVIGCKPNGFP--RAAISWKRGTETL--RQSKRVFLLEDGSL 464

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV------ 420
            +   +  D+G YTC A  +    +   +L V+         T+I V  +K  V      
Sbjct: 465 KIYNITRSDAGSYTCIATNQFGTAKNTGSLIVK-------ERTVITVPPSKMDVTVGESI 517

Query: 421 -----VSWNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKF 470
                VS +P         F G  +         E+ G  S+ +L++   +       K+
Sbjct: 518 VLPCQVSHDPSIEVVFVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQ--LHHSGKY 575

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
           +   +     L+            ++ +   G PG  + ++   + S+   L W      
Sbjct: 576 LCTVQTTLESLS-----------AVADIIVRGPPGPPEDVQVEDISSTTSQLSWRAGPDN 624

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           N  +  + I  Q+     VG   +  +P I +  T +A + GL P  +Y   +      G
Sbjct: 625 NSPIQIFTI--QTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIG 682

Query: 590 DG--AESKYLFY----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  +E   L      VP   P N+ G G + + LVI+W ++PE   N   F Y I +R 
Sbjct: 683 IGEPSEPSELLRTKASVPVVAPVNIHGGGGSRSELVITWESIPEELQNGEGFGYIIMFRP 742

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
             +   W+++ V     S  V  N+      P+E+KV       +GEGS+  + IV  GE
Sbjct: 743 VGS-TTWSKEKVSSVESSRFVYRNESIIPLSPFEVKV--GVYNNEGEGSLSTVTIVYSGE 799



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 151/642 (23%), Positives = 248/642 (38%), Gaps = 87/642 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +NP +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 339 CKASGKPNPWYTWLKNGERLNPEERIQIEN--GTLIITMLNVSDSGVYQCAAENKY-QII 395

Query: 115 SYSIDLSVLA-APYFTVEP----EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
             + +L VLA AP F+  P     F+    +  +   CK +G P   I W    + + Q+
Sbjct: 396 YANAELRVLASAPDFSKSPVKKKSFVQVGGD--IVIGCKPNGFPRAAISWKRGTETLRQS 453

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
                 + G   + I N+ +SD G+Y C ATN  G   K+    ++     IT  P    
Sbjct: 454 KRVFLLEDG--SLKIYNITRSDAGSYTCIATNQFGTA-KNTGSLIVKERTVITVPPSKMD 510

Query: 230 TVDGKTVVLTCRVFGAPKPEVN--WIHN-----------QKELTGGRYTILETGDLKITD 276
              G+++VL C+V   P  EV   W  N             E  GG       GDL I +
Sbjct: 511 VTVGESIVLPCQVSHDPSIEVVFVWFFNGDVIDLKKGVAHFERIGGE----SVGDLMIRN 566

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSD 334
           +    SG+Y C  +  L +      + V+        PED +VE   S T + +  A  D
Sbjct: 567 IQLHHSGKYLCTVQTTLESLSAVADIIVRGPP---GPPEDVQVEDISSTTSQLSWRAGPD 623

Query: 335 PSLKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            +  + I  ++   P         + P  +    Y+ TV   S     ++   A   +  
Sbjct: 624 NNSPIQIFTIQTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGI 683

Query: 390 IEAQ-----ATLTVQVPLEAPSNFTLIQVIDAKKA--VVSWNPVSPQSLRGHFRGYKVQ- 441
            E             VP+ AP N   I      ++  V++W  +  +   G   GY +  
Sbjct: 684 GEPSEPSELLRTKASVPVVAPVN---IHGGGGSRSELVITWESIPEELQNGEGFGYIIMF 740

Query: 442 ------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
                 TW+++          V + ES        +P S    +V  +N    G  S + 
Sbjct: 741 RPVGSTTWSKEKVSSVESSRFVYRNES-------IIPLSPFEVKVGVYNNEGEGSLSTVT 793

Query: 496 SFVTPEGVP------GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGT 547
              + E  P       ++QS  A  +  S   + W    +  G ++GY++ Y     K +
Sbjct: 794 IVYSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDSKES 850

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PF 602
            +G +      +S   TT   + GL+ +T Y   +  Y  AG G  S  +        P 
Sbjct: 851 MIGKI-----RVSGNVTTK-NITGLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPS 904

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           + P N+  +  T + L ++W  +  +E+ +    Y+I +R++
Sbjct: 905 QPPANIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQN 945



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 136/380 (35%), Gaps = 44/380 (11%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK--HVEFSDQGSYT 103
           L   +V L C   G P P+  W ++G  I+ +        G SL I   H +  D G Y 
Sbjct: 41  LSKSEVVLNCAANGYPSPRYRWKQNGTDIDFTMSYHYRLDGGSLAINSPHTD-QDIGMYQ 99

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPEI----- 157
           C  +N +G   S    L       F T     ++  E + V   C     P P       
Sbjct: 100 CLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCG----PPPHFGDLSY 155

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY---------- 205
            W  N  P+     N RR V      + I  +  SD GNY C  TN              
Sbjct: 156 AWTFNDNPLYVQEDN-RRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPPTPL 214

Query: 206 ------VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKE 258
                 V  +    +    PE  +A KD       +V L C   G P P+++W   +   
Sbjct: 215 VQRTDGVMGEYEPKIEVRFPETIQAAKD------SSVKLECFALGNPVPDISWRRLDGSP 268

Query: 259 LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYE 318
           L G          L+I +    D G Y C A N  G     G L          + ++  
Sbjct: 269 LPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPPEWEQKIQNTY 328

Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQ 378
           +    +  + C A   P+   +  WL+  E ++ E     +Q  + +L +T  +  DSG 
Sbjct: 329 LSIYDNLLWECKASGKPNPWYT--WLKNGERLNPEER---IQIENGTLIITMLNVSDSGV 383

Query: 379 YTCRAQTELDFIEAQATLTV 398
           Y C A+ +   I A A L V
Sbjct: 384 YQCAAENKYQIIYANAELRV 403



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 105/286 (36%), Gaps = 32/286 (11%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L+ P FT EP    F     +  V   C A+G P P   W  NG  I        R  G
Sbjct: 22  LLSRPIFTQEPHDVIFPLDLSKSEVVLNCAANGYPSPRYRWKQNGTDIDFTMSYHYRLDG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            +          D G Y C ATN LG +         A+  +     +   +V +G+ VV
Sbjct: 82  GSLAINSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        W  N   L       R+   ETG+L I  V  +D G YTCF
Sbjct: 142 LLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCF 197

Query: 289 ARNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSL 337
             NK    + QG  +  V+    +  +         PE  +     S    C A+ +P  
Sbjct: 198 ITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            +S   L GS       + ++ +S    L +    + D G Y C A
Sbjct: 258 DISWRRLDGSP---LPGKVKYSKSQAI-LEIPNFQQEDEGFYECIA 299



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 14/190 (7%)

Query: 409 TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
           T +Q   A +  VSWN ++     G   GY+V  WT+   E  I ++ V+ G  TT  + 
Sbjct: 809 TSLQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVS-GNVTTKNIT 867

Query: 469 KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VK 526
                +  FA V A+N A  GP S  ++  T +  P    +  A  L +S   L W  VK
Sbjct: 868 GLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLTNSKLCLNWEHVK 927

Query: 527 PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGY 585
             +    ++GYKI Y+  + +K         +I +   TSA+L  L P    Y I +   
Sbjct: 928 TMENESEVLGYKILYRQNRQSKT--------HILETNNTSAEL--LVPFEEDYLIEIRTV 977

Query: 586 TKAGDGAESK 595
           +  GDG+ S+
Sbjct: 978 SDGGDGSSSE 987


>gi|358418126|ref|XP_605070.5| PREDICTED: contactin-3, partial [Bos taurus]
          Length = 912

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 170/632 (26%), Positives = 272/632 (43%), Gaps = 50/632 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P   S +I    +   L I + +  D GSY 
Sbjct: 239 AAKGSTVKLECFALGNPVPQINWRRSDGLPF--SSKIKLRKFSGVLEIPNFQQEDSGSYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    + +  A E+++ +EC+ASG P+P   W+ NG
Sbjct: 297 CIAENSRGKNVARG-RLTYYAKPHWVQLIKDVELAVEDSLYWECRASGKPKPSYRWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + +       R ++    +TI NL  +D+G + C A N  G VY    + V+A AP+ ++
Sbjct: 356 EALVL---EERIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVMASAPDFSK 412

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
            P  +      G  V L C+   +P+   +W   +  +    R + L  G LKI +V  A
Sbjct: 413 TPMKKLIQVQVGSEVNLDCKPRASPRALSSWKKGEVIVQENERTSFLNDGGLKIVNVTKA 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L   
Sbjct: 473 DAGIYTCIAENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLATM 532

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF  +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 533 FTWYFNGALADFRKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADL 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
            V+     P +  + ++ D   A +SW       +PV   S++       G++  T    
Sbjct: 593 IVRGSPGPPESVKVDEITDT-TAQLSWKEGTDNHSPVIAYSVQARTPFSVGWQTAT---- 647

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 648 ----TVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S  +   GS S   + W  V  E  NG   GY + ++ +  T     ++ +    D 
Sbjct: 702 VPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTN---WIQTVVTSPDT 758

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y + +  Y   G+G  S    +F     P   P  V     + + 
Sbjct: 759 PRYIFRNESILPFSLYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTTAPSQVSANSLSSSE 818

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FWRRHNTGE 648
           + +SW A+P    N     Y + +W  +N GE
Sbjct: 819 IEVSWNAIPWKLSNGHLLGYEVRYW--NNGGE 848



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 159/637 (24%), Positives = 242/637 (37%), Gaps = 86/637 (13%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V  A+       ++           P   V+ PE + AA
Sbjct: 181 LYIAKVEPSDVGNYTCVVTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 240

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P S      + +     + I N ++ D+G+Y C
Sbjct: 241 KGSTVKLECFALGNPVPQINWRRSDGLPFSS---KIKLRKFSGVLEIPNFQQEDSGSYEC 297

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K+V    L +   P   +  KD       ++   CR  G PKP   W+ N
Sbjct: 298 IAENSRG---KNVARGRLTYYAKPHWVQLIKDVELAVEDSLYWECRASGKPKPSYRWLKN 354

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITD 312
            + L       +E G L I+++   DSG + C A NK G    S  L V         T 
Sbjct: 355 GEALVLEERIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVMASAPDFSKTP 414

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
             +  +V+ G      C   + P    S  W +G   +       F+  ND  L +   +
Sbjct: 415 MKKLIQVQVGSEVNLDCKPRASPRALSS--WKKGEVIVQENERTSFL--NDGGLKIVNVT 470

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAV-----VSWN 424
           + D+G YTC A+ +         L V  P     APSN      +   ++V     V  +
Sbjct: 471 KADAGIYTCIAENQFGKANGTTHLVVTEPTRITLAPSNMD----VSVGESVILPCQVQHD 526

Query: 425 PVSPQSLRGHFRG-----YKVQTWTEKDGEGSIRELIVNKGE---------STTTEVDKF 470
           P+       +F G      K  +  EK G  S  +L++   +            T VD  
Sbjct: 527 PLLATMFTWYFNGALADFRKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSV 586

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
             A+    R                      G PG  +S++   +  +   L W +    
Sbjct: 587 SSAADLIVR----------------------GSPGPPESVKVDEITDTTAQLSWKEGTDN 624

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           +  ++ Y +  Q+     VG      +P + D  T +A +  L P  +Y   +    K G
Sbjct: 625 HSPVIAYSV--QARTPFSVGWQTATTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIG 682

Query: 590 DGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  S      +    VP   P  V G G + + LVI+W  +PE   N   F Y + +R 
Sbjct: 683 GGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRP 742

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
                 W Q  V        +  N+    F  YE+KV
Sbjct: 743 LGVTN-WIQTVVTSPDTPRYIFRNESILPFSLYEVKV 778



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 170/423 (40%), Gaps = 44/423 (10%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSD----RISQGNYGKSLIIKHVEFSDQ 99
           V   +KK+ L C   G P P   W  +G  I+ S     ++ +GN    ++I      D 
Sbjct: 39  VGSEDKKITLNCEARGNPSPHYRWQLNGSDIDLSMEYRYKLIRGNL---VVINPNRNWDT 95

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----E 154
           G+Y C  +N VG   S    L       F T     ++  E + V   C   G P    E
Sbjct: 96  GNYQCFATNSVGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLC---GPPPHSGE 152

Query: 155 PEIHWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDV 210
               W+ N  P S    + RR V      + I  +  SD GNY C  T+++    V    
Sbjct: 153 LSYAWIFNEYP-SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNARVLGSP 211

Query: 211 YVNVL-------AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG 262
              VL        + P+I  + P+      G TV L C   G P P++NW  +       
Sbjct: 212 TPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVPQINWRRSDGLPFSS 271

Query: 263 RYTILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA 321
           +  + + +G L+I +    DSG Y C A N  G     G LT     H     +D E+  
Sbjct: 272 KIKLRKFSGVLEIPNFQQEDSGSYECIAENSRGKNVARGRLTYYAKPHWVQLIKDVELAV 331

Query: 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTC 381
             S  + C A   P  K S  WL+  E +  E     +Q  + +LT++  +  DSG + C
Sbjct: 332 EDSLYWECRASGKP--KPSYRWLKNGEALVLEER---IQIENGALTISNLNVTDSGMFQC 386

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFT------LIQVIDAKKAVVSWNP-VSPQSLRGH 434
            A+ +   + + A L V   + +  +F+      LIQV    +  +   P  SP++L   
Sbjct: 387 IAENKHGLVYSSAELKV---MASAPDFSKTPMKKLIQVQVGSEVNLDCKPRASPRALSSW 443

Query: 435 FRG 437
            +G
Sbjct: 444 KKG 446



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 137/590 (23%), Positives = 224/590 (37%), Gaps = 93/590 (15%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +   +RI   N   +L I ++  +D G + C   N  G   
Sbjct: 339 CRASGKPKPSYRWLKNGEALVLEERIQIEN--GALTISNLNVTDSGMFQCIAENKHGLVY 396

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           S S +L V+A AP F+  P  + I       V  +CK    P     W   G+ I Q   
Sbjct: 397 S-SAELKVMASAPDFSKTPMKKLIQVQVGSEVNLDCKPRASPRALSSW-KKGEVIVQE-- 452

Query: 172 NPRRK-VGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
           N R   +    + I N+ K+D G Y C A N  G      ++ V+     IT AP +   
Sbjct: 453 NERTSFLNDGGLKIVNVTKADAGIYTCIAENQFGKANGTTHL-VVTEPTRITLAPSNMDV 511

Query: 231 VDGKTVVLTCRVFGAP--KPEVNWIHN-----------QKELTGGRYTILETGDLKITDV 277
             G++V+L C+V   P       W  N             E  GG      +GDL I ++
Sbjct: 512 SVGESVILPCQVQHDPLLATMFTWYFNGALADFRKDGSHFEKVGGS----SSGDLMIRNI 567

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
               SG+Y C  +  + +   +  L V+                G   + + + ++D + 
Sbjct: 568 QLKHSGKYVCMVQTGVDSVSSAADLIVRG-------------SPGPPESVKVDEITDTTA 614

Query: 338 KLSIVWLRGSEP----IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA-----QTELD 388
           +LS  W  G++     I +  + R   S  +    T    +D   +T          E +
Sbjct: 615 QLS--WKEGTDNHSPVIAYSVQARTPFSVGWQTATTVPEVIDGKTHTATVVELNPWVEYE 672

Query: 389 F--------------IEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
           F              + ++   T +   E P +          + V++W+PV  +   G 
Sbjct: 673 FRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGE 732

Query: 435 FRGYKVQTWTEKDGEGSIREL-IVNKGESTTTEVD---------KFVPASKNFARVLAFN 484
             GY V          + R L + N  ++  T  D           +P S    +V  +N
Sbjct: 733 GFGYVV----------AFRPLGVTNWIQTVVTSPDTPRYIFRNESILPFSLYEVKVGVYN 782

Query: 485 GAYNGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKY 541
               GP S + +  + E  P T  S + A  L SS   + W  +  +  NG L+GY+++Y
Sbjct: 783 NKGEGPFSPVTTVFSAEEEPTTAPSQVSANSLSSSEIEVSWNAIPWKLSNGHLLGYEVRY 842

Query: 542 QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            +  G +      +L    +   TSA+L GL+ +  Y   +  +  AG G
Sbjct: 843 WNNGGEEDSS--SKLKVAGN--VTSARLRGLKSNLAYYTAVRAFNSAGTG 888



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 124/300 (41%), Gaps = 32/300 (10%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +E++ +T  C+A G P P   W  NG  I  +     + + 
Sbjct: 22  LLQGPVFVKEPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDIDLSMEYRYKLIR 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N + I   R  DTGNY C ATNS+G +         A+        +   +V +G+ VV
Sbjct: 82  GNLVVINPNRNWDTGNYQCFATNSVGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        WI N+     E    R+   ETG L I  V  +D G YTC 
Sbjct: 142 LLC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCV 197

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
             + +  A+  GS   L ++    + +         PE      G +    C A+ +P  
Sbjct: 198 VTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +++  W R S+ + F S+ +  + +   L +    + DSG Y C A+       A+  LT
Sbjct: 258 QIN--WRR-SDGLPFSSKIKLRKFSGV-LEIPNFQQEDSGSYECIAENSRGKNVARGRLT 313



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 122/539 (22%), Positives = 196/539 (36%), Gaps = 72/539 (13%)

Query: 17  LNVIATGI--SASQNRH--------------APKQQYVTRKKEVALR-NKKVELFCIFGG 59
           LNV  +G+    ++N+H              AP       KK + ++   +V L C    
Sbjct: 376 LNVTDSGMFQCIAENKHGLVYSSAELKVMASAPDFSKTPMKKLIQVQVGSEVNLDCKPRA 435

Query: 60  TPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSID 119
           +P   + W K  V +  ++R S  N G  L I +V  +D G YTC   N  G+A   +  
Sbjct: 436 SPRALSSWKKGEVIVQENERTSFLNDG-GLKIVNVTKADAGIYTCIAENQFGKANG-TTH 493

Query: 120 LSVLAAPYFTVEPEFINAAEEETVTFECKASGLP--EPEIHWVHNGKPIS-QAPPNPRRK 176
           L V      T+ P  ++ +  E+V   C+    P       W  NG     +   +   K
Sbjct: 494 LVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLATMFTWYFNGALADFRKDGSHFEK 553

Query: 177 VGPNR---ITIENLRKSDTGNYGCNATNSLGYVYK--DVYVNVLAHAPEITEAPKDEYT- 230
           VG +    + I N++   +G Y C     +  V    D+ V      PE  +   DE T 
Sbjct: 554 VGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPESVKV--DEITD 611

Query: 231 ----------VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFA 280
                      D  + V+   V       V W   Q   T       +T    + ++   
Sbjct: 612 TTAQLSWKEGTDNHSPVIAYSVQARTPFSVGW---QTATTVPEVIDGKTHTATVVELNPW 668

Query: 281 DSGEYTCFARNKLGTAQGS-GSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
              E+   A NK+G  + S  S  V+    + + P   EV  G  +        DP  + 
Sbjct: 669 VEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPS-EVSGGGGSRSELVITWDPVPEE 727

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV- 398
               L+  E   +    R +   ++  TV  S   D+ +Y  R ++ L F   +  + V 
Sbjct: 728 ----LQNGEGFGYVVAFRPLGVTNWIQTVVTSP--DTPRYIFRNESILPFSLYEVKVGVY 781

Query: 399 ------------------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
                             + P  APS  +    + + +  VSWN +  +   GH  GY+V
Sbjct: 782 NNKGEGPFSPVTTVFSAEEEPTTAPSQVS-ANSLSSSEIEVSWNAIPWKLSNGHLLGYEV 840

Query: 441 QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           + W     E S  +L V  G  T+  +         +  V AFN A  GP S  ++  T
Sbjct: 841 RYWNNGGEEDSSSKLKV-AGNVTSARLRGLKSNLAYYTAVRAFNSAGTGPFSATVNATT 898


>gi|359078211|ref|XP_002697016.2| PREDICTED: contactin-3 [Bos taurus]
          Length = 1028

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 170/632 (26%), Positives = 272/632 (43%), Gaps = 50/632 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P   S +I    +   L I + +  D GSY 
Sbjct: 239 AAKGSTVKLECFALGNPVPQINWRRSDGLPF--SSKIKLRKFSGVLEIPNFQQEDSGSYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    + +  A E+++ +EC+ASG P+P   W+ NG
Sbjct: 297 CIAENSRGKNVARG-RLTYYAKPHWVQLIKDVELAVEDSLYWECRASGKPKPSYRWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + +       R ++    +TI NL  +D+G + C A N  G VY    + V+A AP+ ++
Sbjct: 356 EALVL---EERIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVMASAPDFSK 412

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
            P  +      G  V L C+   +P+   +W   +  +    R + L  G LKI +V  A
Sbjct: 413 TPMKKLIQVQVGSEVNLDCKPRASPRALSSWKKGEVIVQENERTSFLNDGGLKIVNVTKA 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L   
Sbjct: 473 DAGIYTCIAENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLATM 532

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF  +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 533 FTWYFNGALADFRKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADL 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
            V+     P +  + ++ D   A +SW       +PV   S++       G++  T    
Sbjct: 593 IVRGSPGPPESVKVDEITDT-TAQLSWKEGTDNHSPVIAYSVQARTPFSVGWQTAT---- 647

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 648 ----TVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S  +   GS S   + W  V  E  NG   GY + ++ +  T     ++ +    D 
Sbjct: 702 VPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTN---WIQTVVTSPDT 758

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y + +  Y   G+G  S    +F     P   P  V     + + 
Sbjct: 759 PRYIFRNESILPFSLYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTTAPSQVSANSLSSSE 818

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FWRRHNTGE 648
           + +SW A+P    N     Y + +W  +N GE
Sbjct: 819 IEVSWNAIPWKLSNGHLLGYEVRYW--NNGGE 848



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 155/618 (25%), Positives = 239/618 (38%), Gaps = 48/618 (7%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V  A+       ++           P   V+ PE + AA
Sbjct: 181 LYIAKVEPSDVGNYTCVVTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 240

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P S      + +     + I N ++ D+G+Y C
Sbjct: 241 KGSTVKLECFALGNPVPQINWRRSDGLPFSS---KIKLRKFSGVLEIPNFQQEDSGSYEC 297

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K+V    L +   P   +  KD       ++   CR  G PKP   W+ N
Sbjct: 298 IAENSRG---KNVARGRLTYYAKPHWVQLIKDVELAVEDSLYWECRASGKPKPSYRWLKN 354

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITD 312
            + L       +E G L I+++   DSG + C A NK G    S  L V         T 
Sbjct: 355 GEALVLEERIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVMASAPDFSKTP 414

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
             +  +V+ G      C   + P    S  W +G   +       F+  ND  L +   +
Sbjct: 415 MKKLIQVQVGSEVNLDCKPRASPRALSS--WKKGEVIVQENERTSFL--NDGGLKIVNVT 470

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQ 429
           + D+G YTC A+ +         L V  P     APSN   + V   +  ++        
Sbjct: 471 KADAGIYTCIAENQFGKANGTTHLVVTEPTRITLAPSN---MDVSVGESVILPCQVQHDP 527

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
            L   F  Y      +   +GS  E +   G S+   + + +    +   V       + 
Sbjct: 528 LLATMFTWYFNGALADFRKDGSHFEKV--GGSSSGDLMIRNIQLKHSGKYVCMVQTGVDS 585

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
             S     V   G PG  +S++   +  +   L W +    +  ++ Y +  Q+     V
Sbjct: 586 VSSAADLIV--RGSPGPPESVKVDEITDTTAQLSWKEGTDNHSPVIAYSV--QARTPFSV 641

Query: 550 G-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPF 602
           G      +P + D  T +A +  L P  +Y   +    K G G  S      +    VP 
Sbjct: 642 GWQTATTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
             P  V G G + + LVI+W  +PE   N   F Y + +R       W Q  V       
Sbjct: 702 VPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTN-WIQTVVTSPDTPR 760

Query: 663 LVLANQPT--FQPYEIKV 678
            +  N+    F  YE+KV
Sbjct: 761 YIFRNESILPFSLYEVKV 778



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 167/732 (22%), Positives = 281/732 (38%), Gaps = 112/732 (15%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  +   +RI   N   +L I ++  +D G + C   N  G   
Sbjct: 339  CRASGKPKPSYRWLKNGEALVLEERIQIEN--GALTISNLNVTDSGMFQCIAENKHGLVY 396

Query: 115  SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
            S S +L V+A AP F+  P  + I       V  +CK    P     W   G+ I Q   
Sbjct: 397  S-SAELKVMASAPDFSKTPMKKLIQVQVGSEVNLDCKPRASPRALSSW-KKGEVIVQE-- 452

Query: 172  NPRRK-VGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
            N R   +    + I N+ K+D G Y C A N  G      ++ V+     IT AP +   
Sbjct: 453  NERTSFLNDGGLKIVNVTKADAGIYTCIAENQFGKANGTTHL-VVTEPTRITLAPSNMDV 511

Query: 231  VDGKTVVLTCRVFGAP--KPEVNWIHN-----------QKELTGGRYTILETGDLKITDV 277
              G++V+L C+V   P       W  N             E  GG      +GDL I ++
Sbjct: 512  SVGESVILPCQVQHDPLLATMFTWYFNGALADFRKDGSHFEKVGGS----SSGDLMIRNI 567

Query: 278  AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
                SG+Y C  +  + +   +  L V+                G   + + + ++D + 
Sbjct: 568  QLKHSGKYVCMVQTGVDSVSSAADLIVRG-------------SPGPPESVKVDEITDTTA 614

Query: 338  KLSIVWLRGSEP----IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA-----QTELD 388
            +LS  W  G++     I +  + R   S  +    T    +D   +T          E +
Sbjct: 615  QLS--WKEGTDNHSPVIAYSVQARTPFSVGWQTATTVPEVIDGKTHTATVVELNPWVEYE 672

Query: 389  F--------------IEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
            F              + ++   T +   E P +          + V++W+PV  +   G 
Sbjct: 673  FRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGE 732

Query: 435  FRGYKVQTWTEKDGEGSIREL-IVNKGESTTTEVD---------KFVPASKNFARVLAFN 484
              GY V          + R L + N  ++  T  D           +P S    +V  +N
Sbjct: 733  GFGYVV----------AFRPLGVTNWIQTVVTSPDTPRYIFRNESILPFSLYEVKVGVYN 782

Query: 485  GAYNGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKY 541
                GP S + +  + E  P T  S + A  L SS   + W  +  +  NG L+GY+++Y
Sbjct: 783  NKGEGPFSPVTTVFSAEEEPTTAPSQVSANSLSSSEIEVSWNAIPWKLSNGHLLGYEVRY 842

Query: 542  QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV- 600
             +  G +      +L    +   TSA+L GL+ +  Y   +  +  AG G  S  +    
Sbjct: 843  WNNGGEEDSS--SKLKVAGN--VTSARLRGLKSNLAYYTAVRAFNSAGTGPFSATVNATT 898

Query: 601  ----PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVL 656
                P + P NV    +T   ++++W  +  +E+ +    Y++F+R  +     N   VL
Sbjct: 899  KKTPPSQPPGNVVWN-ATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQ----NNVQVL 953

Query: 657  DWRQ--SELVLANQPTFQPYEIKVVQTWTEKDGEGS----IRELIVNKGESTTTEVDKFV 710
            +  +  +EL+L   P  + Y I+V  T    DG  S    I  +        T+ +    
Sbjct: 954  NTNKTSAELLL---PIKEDYIIEVKATTDGGDGTSSEQIRIPRITNMDARGCTSAISTVY 1010

Query: 711  PASKNFARVLAF 722
            P S   + ++ F
Sbjct: 1011 PVSSYVSVIMFF 1022



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 170/423 (40%), Gaps = 44/423 (10%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSD----RISQGNYGKSLIIKHVEFSDQ 99
           V   +KK+ L C   G P P   W  +G  I+ S     ++ +GN    ++I      D 
Sbjct: 39  VGSEDKKITLNCEARGNPSPHYRWQLNGSDIDLSMEYRYKLIRGNL---VVINPNRNWDT 95

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----E 154
           G+Y C  +N VG   S    L       F T     ++  E + V   C   G P    E
Sbjct: 96  GNYQCFATNSVGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLC---GPPPHSGE 152

Query: 155 PEIHWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDV 210
               W+ N  P S    + RR V      + I  +  SD GNY C  T+++    V    
Sbjct: 153 LSYAWIFNEYP-SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNARVLGSP 211

Query: 211 YVNVL-------AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG 262
              VL        + P+I  + P+      G TV L C   G P P++NW  +       
Sbjct: 212 TPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVPQINWRRSDGLPFSS 271

Query: 263 RYTILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA 321
           +  + + +G L+I +    DSG Y C A N  G     G LT     H     +D E+  
Sbjct: 272 KIKLRKFSGVLEIPNFQQEDSGSYECIAENSRGKNVARGRLTYYAKPHWVQLIKDVELAV 331

Query: 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTC 381
             S  + C A   P  K S  WL+  E +  E     +Q  + +LT++  +  DSG + C
Sbjct: 332 EDSLYWECRASGKP--KPSYRWLKNGEALVLEER---IQIENGALTISNLNVTDSGMFQC 386

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFT------LIQVIDAKKAVVSWNP-VSPQSLRGH 434
            A+ +   + + A L V   + +  +F+      LIQV    +  +   P  SP++L   
Sbjct: 387 IAENKHGLVYSSAELKV---MASAPDFSKTPMKKLIQVQVGSEVNLDCKPRASPRALSSW 443

Query: 435 FRG 437
            +G
Sbjct: 444 KKG 446



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 124/300 (41%), Gaps = 32/300 (10%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +E++ +T  C+A G P P   W  NG  I  +     + + 
Sbjct: 22  LLQGPVFVKEPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDIDLSMEYRYKLIR 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N + I   R  DTGNY C ATNS+G +         A+        +   +V +G+ VV
Sbjct: 82  GNLVVINPNRNWDTGNYQCFATNSVGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        WI N+     E    R+   ETG L I  V  +D G YTC 
Sbjct: 142 LLC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCV 197

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
             + +  A+  GS   L ++    + +         PE      G +    C A+ +P  
Sbjct: 198 VTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +++  W R S+ + F S+ +  + +   L +    + DSG Y C A+       A+  LT
Sbjct: 258 QIN--WRR-SDGLPFSSKIKLRKFSGV-LEIPNFQQEDSGSYECIAENSRGKNVARGRLT 313


>gi|410951585|ref|XP_003982475.1| PREDICTED: contactin-3 [Felis catus]
          Length = 1029

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 170/633 (26%), Positives = 268/633 (42%), Gaps = 57/633 (9%)

Query: 47  RNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           +   V+L C   G P+PQ  W + DG+P   S +I    +   L I + +  D GSY C 
Sbjct: 241 KGATVKLECFALGNPVPQINWRRSDGLPF--SSKIKLRKFNGVLEIPNFQQEDTGSYECV 298

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             N  G   +    L+  A P++      +  A E+ + +EC+ASG P+P   W+ NG+ 
Sbjct: 299 AENSRGRNVARG-RLTYYAKPHWVQLIRDVEIAVEDNLFWECRASGKPKPSYRWLKNGEA 357

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +       R ++    +TI NL  +D+G + C A N  G +Y    + V+A AP+ ++ P
Sbjct: 358 LVL---EERIQIENGALTISNLNVTDSGMFQCIAENKHGLIYSSAELKVIASAPDFSKTP 414

Query: 226 KDEY--TVDGKTVVLTCRVFGAPKPEVNW-----IHNQKELTGGRYTILETGDLKITDVA 278
             +      G  V L C+   +PK   +W     I  + E    R + L+ G L+I +V 
Sbjct: 415 MKKLLQVQVGSMVSLDCKPRASPKALRSWKRGDVIVQENE----RISFLKDGGLQIVNVT 470

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            AD G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L 
Sbjct: 471 KADVGTYTCIAENQFGKANGTTRLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLD 530

Query: 339 LSIVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +   W       DF+ +    +    S+   L +       SG+Y C  QT +D + + A
Sbjct: 531 IMFTWYFNGTLTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAA 590

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWT 444
            L V+     P N  + ++ D   A +SW       +PV   S++       G++  T  
Sbjct: 591 DLIVRGSPGPPENVKVDEITDT-TAQLSWKEGTDNHSPVISYSVQARTPFSVGWQTAT-- 647

Query: 445 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGV 503
                 ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E V
Sbjct: 648 ------TVPEII--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAV 699

Query: 504 PGTVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560
           P    S  +   GS S   + W  V  E  NG   GY + ++ +  T     ++ +    
Sbjct: 700 PEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTN---WIQTVVTSP 756

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTP 615
           D      +   + P + Y + +  Y   G+G  S    +F     P   P  V     + 
Sbjct: 757 DTPRYVFRNESIVPFSLYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTIAPSQVSANSLSS 816

Query: 616 NNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
           + + +SW  +P    N     Y +  R  N GE
Sbjct: 817 SEIEVSWNTIPWKLSNGHLLGYEV--RYWNNGE 847



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 168/421 (39%), Gaps = 40/421 (9%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS-QGNYGKSLIIKHVEFSDQGSY 102
           V   +KK+ L C   G P P   W  +G  INPS     + N G  ++I      D GSY
Sbjct: 39  VGSEDKKITLNCEARGNPSPHYRWQLNGSDINPSMEYRYKLNGGNLVVINPNRNWDTGSY 98

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEI 157
            C  +N +G   S    L       F T     ++  E + V   C   G P    E   
Sbjct: 99  QCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLC---GPPPHSGELSY 155

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LG----Y 205
            W+ N  P S    + RR V      + I  +  SD GNY C  T+       LG     
Sbjct: 156 AWIFNEYP-SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSMVTNTRVLGSPTPL 214

Query: 206 VYKDVYVNVLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRY 264
           V +   V +  + P+I  + P+      G TV L C   G P P++NW  +       + 
Sbjct: 215 VLRSDGV-MGEYEPKIEVQFPETLPVAKGATVKLECFALGNPVPQINWRRSDGLPFSSKI 273

Query: 265 TILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQ 323
            + +  G L+I +    D+G Y C A N  G     G LT     H      D E+    
Sbjct: 274 KLRKFNGVLEIPNFQQEDTGSYECVAENSRGRNVARGRLTYYAKPHWVQLIRDVEIAVED 333

Query: 324 SATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +  + C A   P  K S  WL+  E +  E     +Q  + +LT++  +  DSG + C A
Sbjct: 334 NLFWECRASGKP--KPSYRWLKNGEALVLEER---IQIENGALTISNLNVTDSGMFQCIA 388

Query: 384 QTELDFIEAQATLTVQVPLEAPSNFT------LIQVIDAKKAVVSWNP-VSPQSLRGHFR 436
           + +   I + A L V   + +  +F+      L+QV       +   P  SP++LR   R
Sbjct: 389 ENKHGLIYSSAELKV---IASAPDFSKTPMKKLLQVQVGSMVSLDCKPRASPKALRSWKR 445

Query: 437 G 437
           G
Sbjct: 446 G 446



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 169/723 (23%), Positives = 277/723 (38%), Gaps = 120/723 (16%)

Query: 33  PKQQYVTRKKEVALRNKKVELF--CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLI 90
           P    + R  E+A+ +    LF  C   G P P   W K+G  +   +RI   N   +L 
Sbjct: 318 PHWVQLIRDVEIAVEDN---LFWECRASGKPKPSYRWLKNGEALVLEERIQIEN--GALT 372

Query: 91  IKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA-APYFTVEP--EFINAAEEETVTFEC 147
           I ++  +D G + C   N  G   S S +L V+A AP F+  P  + +       V+ +C
Sbjct: 373 ISNLNVTDSGMFQCIAENKHGLIYS-SAELKVIASAPDFSKTPMKKLLQVQVGSMVSLDC 431

Query: 148 KASGLPEPEIHWVHNGKPISQAPPNPRRK-VGPNRITIENLRKSDTGNYGCNATNSLGYV 206
           K    P+    W   G  I Q   N R   +    + I N+ K+D G Y C A N  G  
Sbjct: 432 KPRASPKALRSW-KRGDVIVQE--NERISFLKDGGLQIVNVTKADVGTYTCIAENQFGKA 488

Query: 207 YKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV--NWIHN--------- 255
                + V+     IT AP +     G++V+L C+V   P  ++   W  N         
Sbjct: 489 NGTTRL-VVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGTLTDFKKD 547

Query: 256 --QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               E  GG      +GDL I ++    SG+Y C  +  + +   +  L V+        
Sbjct: 548 GSHFEKVGGS----SSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSP---GP 600

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEP----IDFESEPRFVQSNDYSLTVT 369
           PE+ +V+           ++D + +LS  W  G++     I +  + R   S  +    T
Sbjct: 601 PENVKVDE----------ITDTTAQLS--WKEGTDNHSPVISYSVQARTPFSVGWQTATT 648

Query: 370 KSSELDSGQYTCRA-----QTELDF--------------IEAQATLTVQVPLEAPSNFTL 410
               +D   +T          E +F              + ++   T +   E P +   
Sbjct: 649 VPEIIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVS 708

Query: 411 IQVIDAKKAVVSWNPVSPQSLRGH-------FRGYKVQTWTEKDGEGSIRELIVNKGEST 463
                  + V++W+PV  +   G        FR   V  W +           V + ES 
Sbjct: 709 GGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTNWIQTVVTSPDTPRYVFRNES- 767

Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYL 522
                  VP S    +V  +N    GP S + +  + E  P    S + A  L SS   +
Sbjct: 768 ------IVPFSLYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTIAPSQVSANSLSSSEIEV 821

Query: 523 KW--VKPEQPNGVLMGYKIKY------QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
            W  +  +  NG L+GY+++Y      +S    KV               TSA+L GL+ 
Sbjct: 822 SWNTIPWKLSNGHLLGYEVRYWNNGEEESSSKVKVAG-----------NETSARLRGLKS 870

Query: 575 STKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNLVISWTAMPEIE 629
           +  Y   +  Y  AG G  S  +        P + P NV    +T   ++++W  +  +E
Sbjct: 871 NVAYYTAVRAYNSAGAGPFSTTVNATTKKTPPSQPPGNVVWN-ATDTKVLLNWEQVKAME 929

Query: 630 HNAPHFKYRIFWR--RHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDG 687
           + +    Y++F+R    N+ +  N +       +EL+L   P  + Y I+V  T    DG
Sbjct: 930 NESEVTGYKVFYRTSSQNSVQVLNTNKT----SAELLL---PIKEDYIIEVKATTDGGDG 982

Query: 688 EGS 690
             S
Sbjct: 983 TSS 985



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 125/300 (41%), Gaps = 32/300 (10%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +E++ +T  C+A G P P   W  NG  I+ +     +  G
Sbjct: 22  LLQGPVFIREPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDINPSMEYRYKLNG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N + I   R  DTG+Y C ATNSLG +         A+        +   +V +G+ VV
Sbjct: 82  GNLVVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        WI N+     E    R+   ETG L I  V  +D G YTC 
Sbjct: 142 LLC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCV 197

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
             + +   +  GS   L ++    + +         PE   V  G +    C A+ +P  
Sbjct: 198 VTSMVTNTRVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPVAKGATVKLECFALGNPVP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +++  W R S+ + F S+ +  + N   L +    + D+G Y C A+       A+  LT
Sbjct: 258 QIN--WRR-SDGLPFSSKIKLRKFNGV-LEIPNFQQEDTGSYECVAENSRGRNVARGRLT 313



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 136/605 (22%), Positives = 222/605 (36%), Gaps = 70/605 (11%)

Query: 51   VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            V L C    +P     W +  V +  ++RIS    G  L I +V  +D G+YTC   N  
Sbjct: 427  VSLDCKPRASPKALRSWKRGDVIVQENERISFLKDG-GLQIVNVTKADVGTYTCIAENQF 485

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--WVHNGKPIS- 167
            G+A   +  L V      T+ P  ++ +  E+V   C+    P  +I   W  NG     
Sbjct: 486  GKANG-TTRLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGTLTDF 544

Query: 168  QAPPNPRRKVGPNR---ITIENLRKSDTGNYGCNATNSLGYVYK--DVYVNVLAHAPEIT 222
            +   +   KVG +    + I N++   +G Y C     +  V    D+ V      PE  
Sbjct: 545  KKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENV 604

Query: 223  EAPKDEYT-----------VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD 271
            +   DE T            D  + V++  V       V W   Q   T       +T  
Sbjct: 605  KV--DEITDTTAQLSWKEGTDNHSPVISYSVQARTPFSVGW---QTATTVPEIIDGKTHT 659

Query: 272  LKITDVAFADSGEYTCFARNKLGTAQGS-GSLTVKEHTHITDQPEDYEVEAGQSATFRCN 330
              + ++      E+   A NK+G  + S  S  V+    + + P   EV  G  +     
Sbjct: 660  ATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPS-EVSGGGGSRSELV 718

Query: 331  AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
               DP  +     L+  E   +    R +   ++  TV  S   D+ +Y  R ++ + F 
Sbjct: 719  ITWDPVPEE----LQNGEGFGYVVAFRPLGVTNWIQTVVTSP--DTPRYVFRNESIVPFS 772

Query: 391  EAQATLTV-------------------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
              +  + V                   + P  APS  +    + + +  VSWN +  +  
Sbjct: 773  LYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTIAPSQVS-ANSLSSSEIEVSWNTIPWKLS 831

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
             GH  GY+V+ W   + E S +  +   G  T+  +         +  V A+N A  GP 
Sbjct: 832  NGHLLGYEVRYWNNGEEESSSKVKVA--GNETSARLRGLKSNVAYYTAVRAYNSAGAGPF 889

Query: 492  SEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKV 549
            S  ++  T +  P             +   L W  VK  +    + GYK+ Y++     V
Sbjct: 890  STTVNATTKKTPPSQPPGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNSV 949

Query: 550  GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVE 609
              L        +   TSA+L  L     Y I +   T  GDG  S+    +      N++
Sbjct: 950  QVL--------NTNKTSAELL-LPIKEDYIIEVKATTDGGDGTSSE---QIRIPRITNMD 997

Query: 610  GRGST 614
             RGST
Sbjct: 998  ARGST 1002


>gi|37537817|sp|Q90478.1|L1CA1_DANRE RecName: Full=Neural cell adhesion molecule L1.1; Short=N-CAM-L1.1;
           Short=NCAM-L1.1
 gi|1065714|emb|CAA61490.1| adhesion molecule L1.1 [Danio rerio]
          Length = 1197

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 181/390 (46%), Gaps = 9/390 (2%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           R   + LR + + L CI  G P P+  W +    ++P +R  +    + L I +V  SD 
Sbjct: 184 RSSYLVLRGQTLTLQCIPEGLPTPEVHWDRIDSALSP-NRTKKLYNNRWLQIDNVLESDD 242

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHW 159
           G Y C   N     K +   ++V AAPY+T  PE    A  ETV  +CKA G+P P I W
Sbjct: 243 GEYVCTARNSENSVKHH-YTVTVEAAPYWTRSPEEHLYAPGETVRLDCKADGIPAPNITW 301

Query: 160 VHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
             NG P+S    +PRR+V   ++ + N+  SDT  Y C A N  G +  + +V+V+    
Sbjct: 302 SINGVPVSGTDVDPRRRVSSGKLILSNVEFSDTAVYQCEAVNKHGSILINTHVHVVELPA 361

Query: 220 EITEAPKDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITD 276
           +I    +  Y    G+TV+L CR FG+P P+++W  + +   L+  + +    G LKI++
Sbjct: 362 QILTPDERLYQATAGQTVMLDCRTFGSPLPKIHWEILDSIPALSNAKISQTTNGSLKISN 421

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
           V+  DS  YTC       +   S  + V   T I   P++  V  G  A   C    D +
Sbjct: 422 VSEEDSNRYTCSVSETNKSI--SADVEVLNRTKIVGPPQNLHVIRGSDAILHCKYTVDHN 479

Query: 337 LKLSIV-WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
           LK   V W +    I   +        + SL V      D G Y+C   T LD   A   
Sbjct: 480 LKSPTVQWNKDGHKITASTSNDKYHEIEGSLKVLDVQMEDMGIYSCEVSTTLDSDTASGY 539

Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           +TVQ   + P +  L + ++ +   +SW P
Sbjct: 540 ITVQDKPDPPQSLKLSEKME-RSVTISWMP 568



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 150/565 (26%), Positives = 242/565 (42%), Gaps = 64/565 (11%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNA 199
           +T+T +C   GLP PE+HW      +S   PN  +K+  NR + I+N+ +SD G Y C A
Sbjct: 193 QTLTLQCIPEGLPTPEVHWDRIDSALS---PNRTKKLYNNRWLQIDNVLESDDGEYVCTA 249

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL 259
            NS   V     V V A AP  T +P++     G+TV L C+  G P P + W  N   +
Sbjct: 250 RNSENSVKHHYTVTVEA-APYWTRSPEEHLYAPGETVRLDCKADGIPAPNITWSINGVPV 308

Query: 260 TGGRYT---ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           +G        + +G L +++V F+D+  Y C A NK       GS+ +  H H+ + P  
Sbjct: 309 SGTDVDPRRRVSSGKLILSNVEFSDTAVYQCEAVNK------HGSILINTHVHVVELPAQ 362

Query: 317 --------YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                   Y+  AGQ+    C     P  K+    L   + I   S  +  Q+ + SL +
Sbjct: 363 ILTPDERLYQATAGQTVMLDCRTFGSPLPKIHWEIL---DSIPALSNAKISQTTNGSLKI 419

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAP-SNFTLIQVIDA---KKAVVSWN 424
           +  SE DS +YTC        I A   +  +  +  P  N  +I+  DA    K  V  N
Sbjct: 420 SNVSEEDSNRYTCSVSETNKSISADVEVLNRTKIVGPPQNLHVIRGSDAILHCKYTVDHN 479

Query: 425 PVSPQSLRGHFRGYKVQTWTEKDG----EGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
             SP +++ +  G+K+   T  D     EGS++ L V        +++     S   +  
Sbjct: 480 LKSP-TVQWNKDGHKITASTSNDKYHEIEGSLKVLDV--------QMEDMGIYSCEVSTT 530

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
           L  + A          ++T +  P   QSL+       +  + W+   + N  +  Y I+
Sbjct: 531 LDSDTASG--------YITVQDKPDPPQSLKLSEKMERSVTISWMPSVENNSPVTEYVIE 582

Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA--ESKYLF 598
               +    G   ++   +S    +   +      +KY   +      G  A  ES   +
Sbjct: 583 MNEGETPDEG-QWQKYRSVSQDIDSWRSICSY---SKYHFQIRAVNSIGTSAPTESSLSY 638

Query: 599 YVPFK----NPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR-HNTGEAWNQD 653
             P      NP+NV    + P +++ISW  M   + N P F+Y++FWRR  ++G  W + 
Sbjct: 639 STPAAKPDTNPENVMTLSTDPKSMIISWQEMDRRQFNGPGFQYKVFWRRAADSGAHWTES 698

Query: 654 DVLDWRQSELVLANQPTFQPYEIKV 678
            V       L++ N  TF  +EIKV
Sbjct: 699 SV---SNPPLMVNNTGTFVSFEIKV 720



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 104/229 (45%), Gaps = 19/229 (8%)

Query: 379 YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           +  + Q   D   A   LTV        PLEAPS  ++ + +     +V W+PV P+S+R
Sbjct: 716 FEIKVQAVNDLGAAPEPLTVIGYSGEDFPLEAPSALSVTE-LQKTSVMVRWSPVRPESVR 774

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEV-----DKFVPASKNFAR----VLAF 483
           GH  GYK+    +     +    + + G  T  EV     +K V   + ++     + AF
Sbjct: 775 GHLLGYKIYLRMKGSQWETPGRAVSSSGNPTVIEVPADAAEKIVSDLQFYSDYTLTITAF 834

Query: 484 NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQS 543
           N    GP SE  SF TPEG PG V  L       S   L+W  P +PNG + GY ++YQ 
Sbjct: 835 NSKGEGPHSEE-SFSTPEGAPGPVLFLPFDSPSESEITLRWEAPHKPNGEIRGYLLQYQE 893

Query: 544 VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 592
           V      P  + +  I  P  T   L  L P ++Y  HL+    AGDGA
Sbjct: 894 VVIGSESP--QHVESIDLPAVTEFTLKNLNPESRYTFHLSARNDAGDGA 940



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 125/305 (40%), Gaps = 25/305 (8%)

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEE--ETVTFECK-ASGLPEP 155
           QG+Y C  +N +G A S  + L+    P      +    A E  E+    C        P
Sbjct: 42  QGTYRCYAANELGTAVSNLVHLTTEPVPSLAKVKKQKRRAYEVGESAVLRCNPPKSSVTP 101

Query: 156 EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNA--TNSLGYVYKD-- 209
           +IHW+         P N R  +  +  +   NL  +D+  +Y CNA   N+   + K+  
Sbjct: 102 KIHWM--DMQFHHIPLNERVTISRDGNLYFANLIANDSRDDYTCNAHYINASIILPKEPM 159

Query: 210 -VYV--------NVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT 260
            +YV        N  A       A      + G+T+ L C   G P PEV+W      L+
Sbjct: 160 SIYVTPSNSVVKNRRAKLHHPAGARSSYLVLRGQTLTLQCIPEGLPTPEVHWDRIDSALS 219

Query: 261 GGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEV 319
             R   L     L+I +V  +D GEY C ARN   + +   ++TV+   + T  PE++  
Sbjct: 220 PNRTKKLYNNRWLQIDNVLESDDGEYVCTARNSENSVKHHYTVTVEAAPYWTRSPEEHLY 279

Query: 320 EAGQSATFRCNAVSDPSLKLSIVWLRGSEPID-FESEPRFVQSNDYSLTVTKSSELDSGQ 378
             G++    C A   P+   +I W     P+   + +PR   S+   L ++     D+  
Sbjct: 280 APGETVRLDCKADGIPA--PNITWSINGVPVSGTDVDPRRRVSSG-KLILSNVEFSDTAV 336

Query: 379 YTCRA 383
           Y C A
Sbjct: 337 YQCEA 341


>gi|348543227|ref|XP_003459085.1| PREDICTED: contactin-2-like [Oreochromis niloticus]
          Length = 1039

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 185/744 (24%), Positives = 303/744 (40%), Gaps = 110/744 (14%)

Query: 26  ASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGN 84
           A+  + AP  +        AL     +L C   G P+P+  W K DG  + PS +     
Sbjct: 228 ANPRKSAPTIKVRFLADTYALAGHTAQLECFAYGNPVPKVRWRKVDG--LMPS-KAGPTV 284

Query: 85  YGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET-- 142
            G +L +  + F D+G Y CE  N  G   +Y   ++V A P +    + +  +E E   
Sbjct: 285 EGPTLTLPELSFDDEGIYECEAYNSEGR-DTYQGRINVQAQPEWL---QVMTDSEVEISS 340

Query: 143 -VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATN 201
            + + C A+G P P + W+ NG+P+S      R +V    + I NL   D+G Y C A N
Sbjct: 341 DLQWSCVAAGKPRPSVRWLRNGQPLST---QDRVEVNGVHLRIINLALEDSGMYQCVAEN 397

Query: 202 SLGYVYKDVYVNVLAHAPEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL 259
             G +Y    + V   AP+    P  +      G  V++ CR   APKP + W    + L
Sbjct: 398 KHGTIYSTAELRVQVQAPDFRLNPVRKLIPAARGGQVMIDCRPRAAPKPSLFWSRGTELL 457

Query: 260 T-GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYE 318
           T   R T+   G L I +++ AD G+YTCFA N LG A  +G L+V++ T IT  P + +
Sbjct: 458 TNSSRITVTPDGILWIYNISRADEGKYTCFAENYLGKANSTGHLSVRDATKITLAPSNAD 517

Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSE 373
           +  G++ T +C+A  D ++ L+  W      +D E+          + N   L + ++  
Sbjct: 518 INQGENVTLQCHASHDAAMDLTFTWSLNGVLLDLENSAGPYHRVEGKENTGDLLIVRAQL 577

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPV 426
             +G Y C AQT +D   A A L V+ P   P    L++ +      + W       +P+
Sbjct: 578 SQAGIYVCTAQTVVDSASASARLVVRGPPGPPGGL-LVKNVAETSVELRWSCGYDNHSPI 636

Query: 427 SPQSLRGHFRGYKVQTWTEKDGEGSIRELIVN-KGESTTTEVDKFVPASKNFARVLAFNG 485
               + G  R      W +      +R   VN +G + +  V   +P +    RV+A N 
Sbjct: 637 GKYVIMG--RSPLSSEWRK------MRTDPVNIEGNAESARVIGLIPWTDYEFRVIASNI 688

Query: 486 AYNGPPSEIISFVTPEGVPGTVQSLEAI-PLGSSA-------FYLKW--VKPEQPNGVLM 535
             +G PS       P  +  T+Q+   + P G +          + W  +  E  NG   
Sbjct: 689 LGSGEPS------MPSHIIRTLQAAPTVAPSGLAGGGGDRDELIVTWTPMAREYQNGDGF 742

Query: 536 GYKIKYQSVKGTKVGPLLERLPYI--SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
           GY + ++  KGT     + R+P +  S     ++ LA   P   + + +  Y   G+G  
Sbjct: 743 GYILAFRK-KGTSSWTEV-RVPRVESSRYVYYNSSLAAYTP---FEVKIKAYNHKGEGPF 797

Query: 594 SKYLFY-----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI-FWRRHNTG 647
           S+          P   P ++     +   + +SW  + ++  N     Y I +WR+H   
Sbjct: 798 SQVAVVHSAEEEPTVGPSSINATALSAFEIQVSWEPVQQLSANGILRGYEIRYWRQHERE 857

Query: 648 EAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVD 707
            A ++                                          +   G   T  V 
Sbjct: 858 AAADR------------------------------------------VRTAGLEPTARVS 875

Query: 708 KFVPASKNFARVLAFNGAYNGPPS 731
              P+++    VLA+N A  GPPS
Sbjct: 876 GLRPSTRYHVAVLAYNSAGTGPPS 899



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 176/726 (24%), Positives = 291/726 (40%), Gaps = 89/726 (12%)

Query: 33   PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
            P+   V    EV + +  ++  C+  G P P   W ++G P++  DR+     G  L I 
Sbjct: 325  PEWLQVMTDSEVEI-SSDLQWSCVAAGKPRPSVRWLRNGQPLSTQDRVEVN--GVHLRII 381

Query: 93   HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKAS 150
            ++   D G Y C   N  G   S +     + AP F + P  + I AA    V  +C+  
Sbjct: 382  NLALEDSGMYQCVAENKHGTIYSTAELRVQVQAPDFRLNPVRKLIPAARGGQVMIDCRPR 441

Query: 151  GLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT-IENLRKSDTGNYGCNATNSLGYVYKD 209
              P+P + W    + ++ +    R  V P+ I  I N+ ++D G Y C A N LG     
Sbjct: 442  AAPKPSLFWSRGTELLTNSS---RITVTPDGILWIYNISRADEGKYTCFAENYLGKANST 498

Query: 210  VYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVF--GAPKPEVNWIHN----QKELTGGR 263
             +++V   A +IT AP +     G+ V L C      A      W  N      E + G 
Sbjct: 499  GHLSV-RDATKITLAPSNADINQGENVTLQCHASHDAAMDLTFTWSLNGVLLDLENSAGP 557

Query: 264  YTILE----TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEV 319
            Y  +E    TGDL I     + +G Y C A+  + +A  S  L V+             V
Sbjct: 558  YHRVEGKENTGDLLIVRAQLSQAGIYVCTAQTVVDSASASARLVVRGPPGPPGGLLVKNV 617

Query: 320  EAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFE-----SEPRFVQSN------------ 362
             A  S   R +   D    +    + G  P+  E     ++P  ++ N            
Sbjct: 618  -AETSVELRWSCGYDNHSPIGKYVIMGRSPLSSEWRKMRTDPVNIEGNAESARVIGLIPW 676

Query: 363  -DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV-PLEAPSNFTLIQVIDAKKAV 420
             DY   V  S+ L SG+ +         + +    T+Q  P  APS        D  + +
Sbjct: 677  TDYEFRVIASNILGSGEPS---------MPSHIIRTLQAAPTVAPSGLAGGGG-DRDELI 726

Query: 421  VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFA-- 478
            V+W P++ +   G   GY +     K G  S  E+ V + ES+     ++V  + + A  
Sbjct: 727  VTWTPMAREYQNGDGFGYILAF--RKKGTSSWTEVRVPRVESS-----RYVYYNSSLAAY 779

Query: 479  -----RVLAFNGAYNGPPSEIISFVTPEGVPGTV--QSLEAIPLGSSAFYLKW--VKPEQ 529
                 ++ A+N    GP S++    + E  P TV   S+ A  L +    + W  V+   
Sbjct: 780  TPFEVKIKAYNHKGEGPFSQVAVVHSAEEEP-TVGPSSINATALSAFEIQVSWEPVQQLS 838

Query: 530  PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
             NG+L GY+I+Y      +      R   + +PT   A+++GL PST+Y + +  Y  AG
Sbjct: 839  ANGILRGYEIRYWRQHEREAAADRVRTAGL-EPT---ARVSGLRPSTRYHVAVLAYNSAG 894

Query: 590  DGAESKYLFYVPFKNPDNV-------EGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
             G  S        K P N        +  GS    + + W  +  + + +    Y++ ++
Sbjct: 895  TGPPSPRTTVTTRKPPPNRPPGSVSWKAHGS---RVTVRWDQVIAMHNESAILGYKVLYK 951

Query: 643  RHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGEST 702
              +          LD  ++ + L   P    Y +  + +W E  G+G   E+IV++   T
Sbjct: 952  HEDQAAL----KFLDKTKTSVSLP-LPKDNGYIVLEIWSWGE-GGDGPAHEIIVSRDSGT 1005

Query: 703  TTEVDK 708
               V K
Sbjct: 1006 GMMVQK 1011


>gi|126336357|ref|XP_001373792.1| PREDICTED: neural cell adhesion molecule L1-like protein
           [Monodelphis domestica]
          Length = 1224

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 189/712 (26%), Positives = 290/712 (40%), Gaps = 80/712 (11%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
           L C   G P PQ  W K G  + P  R +Q N+GK+L I+ V   D+G Y C   N  G 
Sbjct: 275 LECFAEGLPTPQITWKKVGEDL-PKGRETQENFGKTLKIEQVTHMDKGHYHCMAKNYKGT 333

Query: 113 AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPN 172
           A  +   ++V   P +T +PE    +        C+A G P PEI W  NG PI + P  
Sbjct: 334 A-IHEFRVTVEEPPRWTKKPESAVYSIGSNGILLCEAEGEPAPEIEWKINGLPIDKHPL- 391

Query: 173 PRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE--YT 230
           P     P  I+  N++ + TG Y C ATN  G +     +NVL  AP + + P DE    
Sbjct: 392 PGIVFFPGEISFSNVQLNHTGVYQCEATNVHGKILATANINVLDIAP-LMQTPDDEGYAA 450

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           V G +  L C VF +P   + W    K   L G  YT    G L+I +    D+G YTC+
Sbjct: 451 VVGYSAFLLCEVFASPPAVITWQRPSKVERLEGSHYTTYPNGTLEIKETTKEDAGPYTCW 510

Query: 289 ARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LSIVWLRG 346
            ++  G    +  LT+++ T++T  P +  V         C+   D  LK  L + W + 
Sbjct: 511 VKSPRGEVAVTAHLTIRDATNLTVSPLNPHVIRSHLLVLHCDIECDSHLKHSLKLSWSKD 570

Query: 347 SEPIDFE--SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEA 404
            E ++     + R +   D  LT++  +  D G Y C A T LD   A   +T+    + 
Sbjct: 571 GEALEINGTEDVRIIIDGD-KLTISNITLEDEGLYACLANTALDRAMATTQVTILDVPDP 629

Query: 405 PSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTT 464
           P N  L +  + +   +SW   +  +       + ++    +D  G   EL   +G  TT
Sbjct: 630 PENVYLSERQN-RSVRLSWE--AGDNHNSAITEFIIEFEGNRDEPGKWAELTKVQGNETT 686

Query: 465 TEVDKFVPASKNFARVLAFNGAYNGPPSEIISF-VTPEGVPGTVQSLEAIPLGSSA---F 520
             +    P  +   RV   N      PS    +  TP   P   ++ E I + +S     
Sbjct: 687 ALL-SLAPYVRYQFRVRGVNAVGRSIPSSPSDYHETPPAAPD--KNPENIRVEASQPKEM 743

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY-ISDPTTTSAKLAGLEPS-- 575
           ++KW  +   + NG  + Y++ ++           + +P   SD   T   L  +  S  
Sbjct: 744 FIKWEPLNSMEQNGPGLEYRVTWRQ----------QGVPSEWSDELATDNTLRVMTSSVF 793

Query: 576 TKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEH 630
           T Y + +    + G G E + +        P   P +V  R      + ++W  +P+ E 
Sbjct: 794 TPYDVKVQAINQLGSGPEPQTITVYSGEDYPDAAPLSVTTRVINSTLINVTWDRIPK-ER 852

Query: 631 NAPHFK-YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEG 689
              H K Y+I W        W     LD R+            P EI+ ++         
Sbjct: 853 VHGHLKGYQINW--------WKTKSRLDERKF-----------PKEIQTIRL-------- 885

Query: 690 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                    G+ +   V    P S+    VLA+N    GP S  ISF TPEG
Sbjct: 886 --------PGDRSYGMVPSLDPFSEFKLTVLAYNSKGAGPESSPISFQTPEG 929



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 134/571 (23%), Positives = 221/571 (38%), Gaps = 76/571 (13%)

Query: 142 TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCN 198
           T+  EC A GLP P+I W   G+ + +      R+   N    + IE +   D G+Y C 
Sbjct: 272 TLLLECFAEGLPTPQITWKKVGEDLPKG-----RETQENFGKTLKIEQVTHMDKGHYHCM 326

Query: 199 ATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--- 255
           A N  G    +  V V    P  T+ P+      G   +L C   G P PE+ W  N   
Sbjct: 327 AKNYKGTAIHEFRVTV-EEPPRWTKKPESAVYSIGSNGILLCEAEGEPAPEIEWKINGLP 385

Query: 256 --QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
             +  L G    +   G++  ++V    +G Y C A N  G    + ++ V +   +   
Sbjct: 386 IDKHPLPG---IVFFPGEISFSNVQLNHTGVYQCEATNVHGKILATANINVLDIAPLMQT 442

Query: 314 PED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKS 371
           P+D  Y    G SA   C   + P     I W R S+    E    +    + +L + ++
Sbjct: 443 PDDEGYAAVVGYSAFLLCEVFASPPA--VITWQRPSKVERLEGS-HYTTYPNGTLEIKET 499

Query: 372 SELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
           ++ D+G YTC  ++    +   A LT++               DA    VS  P++P  +
Sbjct: 500 TKEDAGPYTCWVKSPRGEVAVTAHLTIR---------------DATNLTVS--PLNPHVI 542

Query: 432 RGHFRGYKVQ-------------TWTEKDGE-----GSIRELIVNKGESTTTEVDKFVPA 473
           R H                    +W+ KDGE     G+    I+  G+  T  +      
Sbjct: 543 RSHLLVLHCDIECDSHLKHSLKLSWS-KDGEALEINGTEDVRIIIDGDKLT--ISNITLE 599

Query: 474 SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV 533
            +     LA N A +   +   + VT   VP   +++      + +  L W   +  N  
Sbjct: 600 DEGLYACLA-NTALDR--AMATTQVTILDVPDPPENVYLSERQNRSVRLSWEAGDNHNSA 656

Query: 534 LMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
           +  + I+++  +  + G   E      + TT    L  L P  +Y+  + G    G    
Sbjct: 657 ITEFIIEFEGNRD-EPGKWAELTKVQGNETTA---LLSLAPYVRYQFRVRGVNAVGRSIP 712

Query: 594 SKYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTG 647
           S    Y       P KNP+N+    S P  + I W  +  +E N P  +YR+ WR+    
Sbjct: 713 SSPSDYHETPPAAPDKNPENIRVEASQPKEMFIKWEPLNSMEQNGPGLEYRVTWRQQGVP 772

Query: 648 EAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
             W+ +   D   + L +     F PY++KV
Sbjct: 773 SEWSDELATD---NTLRVMTSSVFTPYDVKV 800



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 144/586 (24%), Positives = 237/586 (40%), Gaps = 73/586 (12%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPINPS--DRISQGNY----GKSLIIKHVEFSDQGSYTCEV 106
            L C    +P     W +      PS  +R+   +Y      +L IK     D G YTC V
Sbjct: 458  LLCEVFASPPAVITWQR------PSKVERLEGSHYTTYPNGTLEIKETTKEDAGPYTCWV 511

Query: 107  SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTF----ECKASGLPEPEIHWVHN 162
             +  GE  + +  L++  A   TV P   +      +      EC +      ++ W  +
Sbjct: 512  KSPRGEV-AVTAHLTIRDATNLTVSPLNPHVIRSHLLVLHCDIECDSHLKHSLKLSWSKD 570

Query: 163  GKPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
            G+ +      + R  +  +++TI N+   D G Y C A  +L        V +L    ++
Sbjct: 571  GEALEINGTEDVRIIIDGDKLTISNITLEDEGLYACLANTALDRAMATTQVTIL----DV 626

Query: 222  TEAPKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQK------ELTG-----GRYTILE 268
             + P++ Y  +   ++V L+         E    HN        E  G     G++  L 
Sbjct: 627  PDPPENVYLSERQNRSVRLSW--------EAGDNHNSAITEFIIEFEGNRDEPGKWAELT 678

Query: 269  T--GDLKITDVAFADSGEYTCFAR--NKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAG 322
               G+     ++ A    Y    R  N +G +  S      E         PE+  VEA 
Sbjct: 679  KVQGNETTALLSLAPYVRYQFRVRGVNAVGRSIPSSPSDYHETPPAAPDKNPENIRVEAS 738

Query: 323  QSATF-----RCNAVSD--PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
            Q           N++    P L+  + W +   P ++  E     + D +L V  SS   
Sbjct: 739  QPKEMFIKWEPLNSMEQNGPGLEYRVTWRQQGVPSEWSDE----LATDNTLRVMTSSVFT 794

Query: 376  SGQYTCRAQTELDFIEAQATLTV----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
                  +A  +L       T+TV      P  AP + T  +VI++    V+W+ +  + +
Sbjct: 795  PYDVKVQAINQLGSGPEPQTITVYSGEDYPDAAPLSVT-TRVINSTLINVTWDRIPKERV 853

Query: 432  RGHFRGYKVQTWTEK---DGEGSIREL--IVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
             GH +GY++  W  K   D     +E+  I   G+ +   V    P S+    VLA+N  
Sbjct: 854  HGHLKGYQINWWKTKSRLDERKFPKEIQTIRLPGDRSYGMVPSLDPFSEFKLTVLAYNSK 913

Query: 487  YNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKG 546
              GP S  ISF TPEGVP     L+ I +  +   L W  P++ +G L GY ++YQ +  
Sbjct: 914  GAGPESSPISFQTPEGVPEQPNFLKVIHVDKNTVVLSWGLPKKAHGNLTGYSLQYQIIND 973

Query: 547  T-KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            T ++G L E    I++P+  S ++  L  +TKY+ +L   T  G G
Sbjct: 974  TDEIGELKEI--NITNPSKLSWRVPDLNSTTKYKFYLRACTSKGCG 1017



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 168/443 (37%), Gaps = 61/443 (13%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVP---INPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEVS 107
           +  C   G P P   W+K+      ++    IS  N G   I+     +  QG Y C  S
Sbjct: 52  QFVCEAKGNPEPTFHWTKNEEQFSLLSDPRIISSNNTGTFKILNEGHITHFQGKYRCFAS 111

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECKA-SGLPEPEIHWVHNGKP 165
           N +G A S  I+  V   P F  E  E +   E  ++   C    G+P   I+W++    
Sbjct: 112 NELGTAMSDEIEFIVPNVPKFPKEKIEPLEVEEGNSIVLHCNPPKGIPPLHIYWMNID-- 169

Query: 166 ISQAPPNPRRKVG-PNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA 218
           +   P + R  +     +   N+ ++D+ N Y C A        +  +   + VN L HA
Sbjct: 170 LQHIPQDERVYMSQKGDLYFANVEENDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHA 229

Query: 219 --------------------------PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNW 252
                                     PE + +      + G T++L C   G P P++ W
Sbjct: 230 NDSSSHRQNVTKANVIKQREPRMLLPPETSGSHSSITIIKGGTLLLECFAEGLPTPQITW 289

Query: 253 IHNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT 311
               ++L  GR T    G  LKI  V   D G Y C A+N  GTA     +TV+E    T
Sbjct: 290 KKVGEDLPKGRETQENFGKTLKIEQVTHMDKGHYHCMAKNYKGTAIHEFRVTVEEPPRWT 349

Query: 312 DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKS 371
            +PE      G +    C A  +P+ +  I W     PID    P  V      ++ +  
Sbjct: 350 KKPESAVYSIGSNGILLCEAEGEPAPE--IEWKINGLPIDKHPLPGIVFFPG-EISFSNV 406

Query: 372 SELDSGQYTCRAQTELDFIEAQATLTV-------QVP-------LEAPSNFTLIQVIDAK 417
               +G Y C A      I A A + V       Q P       +   S F L +V  + 
Sbjct: 407 QLNHTGVYQCEATNVHGKILATANINVLDIAPLMQTPDDEGYAAVVGYSAFLLCEVFASP 466

Query: 418 KAVVSWN-PVSPQSLRG-HFRGY 438
            AV++W  P   + L G H+  Y
Sbjct: 467 PAVITWQRPSKVERLEGSHYTTY 489



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 75/185 (40%), Gaps = 13/185 (7%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPR----RKVGPNRITIENLRKSDTGNY 195
           +E   F C+A G PEP  HW  N +  S    +PR       G  +I  E       G Y
Sbjct: 48  DEYFQFVCEAKGNPEPTFHWTKNEEQFSLL-SDPRIISSNNTGTFKILNEGHITHFQGKY 106

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNW- 252
            C A+N LG    D    ++ + P+  +   +   V +G ++VL C    G P   + W 
Sbjct: 107 RCFASNELGTAMSDEIEFIVPNVPKFPKEKIEPLEVEEGNSIVLHCNPPKGIPPLHIYWM 166

Query: 253 -IHNQKELTGGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEH 307
            I  Q      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV   
Sbjct: 167 NIDLQHIPQDERVYMSQKGDLYFANVEENDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSL 226

Query: 308 THITD 312
            H  D
Sbjct: 227 KHAND 231



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 69/194 (35%), Gaps = 42/194 (21%)

Query: 215 LAHAPEITEA-------PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT------- 260
           +   P ITE        P DEY          C   G P+P  +W  N+++ +       
Sbjct: 29  VKQVPTITEQSTVQVAFPFDEY------FQFVCEAKGNPEPTFHWTKNEEQFSLLSDPRI 82

Query: 261 -----GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT--HITDQ 313
                 G + IL  G   IT       G+Y CFA N+LGTA       +  +      ++
Sbjct: 83  ISSNNTGTFKILNEG--HITHF----QGKYRCFASNELGTAMSDEIEFIVPNVPKFPKEK 136

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP---RFVQSNDYSLTVTK 370
            E  EVE G S    CN        L I W+     ID +  P   R   S    L    
Sbjct: 137 IEPLEVEEGNSIVLHCNPPKGIP-PLHIYWMN----IDLQHIPQDERVYMSQKGDLYFAN 191

Query: 371 SSELDS-GQYTCRA 383
             E DS   Y C A
Sbjct: 192 VEENDSRNDYCCFA 205


>gi|50511265|dbj|BAD32618.1| mKIAA3024 protein [Mus musculus]
          Length = 898

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 188/733 (25%), Positives = 300/733 (40%), Gaps = 112/733 (15%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+P  +W + DG PI    R  + N    L I + +  D GSY 
Sbjct: 109 AEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGSYE 166

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P +      I+ A EE+V +ECKA+G P+P   W+ NG
Sbjct: 167 CVAENSRGKNVAKG-QLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNG 225

Query: 164 KPISQAPPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
            P+       R ++    G   ITI NL  SD G Y C A N  G ++    ++V+A +P
Sbjct: 226 DPLLT-----RDRIQIEQGTLNITIVNL--SDAGMYQCVAENKHGVIFSSAELSVIAESP 278

Query: 220 EITEAPKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITD 276
           + +       T+   G  VV+ C+   +P+P   W   ++ L    R TI E G+L+I +
Sbjct: 279 DFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIIN 338

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
           V  +D+G YTC A N  GTA  +G++ VK+ T +   P   +V  G+S    C    D S
Sbjct: 339 VTKSDAGSYTCIATNHFGTASSTGNVIVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHS 398

Query: 337 LKLSIVWLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           L +   W      IDF+ +         Q +   L +       +G+Y C  QT +D + 
Sbjct: 399 LDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLS 458

Query: 392 AQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEKD 447
             A L V+ P   P   T+ ++ D   A +SW P     SP ++      Y +Q  T   
Sbjct: 459 VAADLIVRGPPGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFS 511

Query: 448 ----GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EI 494
                  ++ +L+   G++ T  V    P  +   R +A N    G PS         E 
Sbjct: 512 VGWQAVNTVPDLV--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEA 569

Query: 495 ISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPL 552
           +  VTP  V G   S        S   + W  V  E  NG   GY + ++       G +
Sbjct: 570 LPEVTPANVSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFR-----PHGKM 617

Query: 553 LERLPYI--SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNP 605
           +  L  +  +D +    +   + P + + + +  +   G+G  S   L Y     P K P
Sbjct: 618 IWMLTVLASADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTLVYSAEEEPTKPP 677

Query: 606 DNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVL 665
            ++  R  +  ++                    +FW                   +  + 
Sbjct: 678 ASIFARSLSATDI-------------------EVFW-------------------ASPIG 699

Query: 666 ANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 725
            N+   Q YE+K    W   D E + ++ I   G  T+T++     ++     V A+N A
Sbjct: 700 KNRGRIQGYEVKY---WRHDDKEENAKK-IRTVGNQTSTKITNLKGSALYHLSVKAYNSA 755

Query: 726 YNGPPSEIISFVT 738
             GP S  ++  T
Sbjct: 756 GTGPSSATVNVTT 768



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 176/687 (25%), Positives = 260/687 (37%), Gaps = 103/687 (14%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V+ PE + A
Sbjct: 50  NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPA 109

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
            +  TV  EC A G P P I W   +GKPI++     RR      + I N ++ D G+Y 
Sbjct: 110 EKGTTVKLECFALGNPVPTILWRRADGKPIAR---KARRHKSNGILEIPNFQQEDAGSYE 166

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P   +   D +    ++V   C+  G PKP   W+ N 
Sbjct: 167 CVAENSRGKNVAKGQLTFYAQ-PNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNG 225

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
             L       +E G L IT V  +D+G Y C A NK G    S  L+V     I + P+ 
Sbjct: 226 DPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSV-----IAESPDF 280

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  +    W +G E I  E+E R   S D +L +
Sbjct: 281 SRTLLKRVTLVKVGGEVVIECKPKASP--RPVYTWRKGRE-ILRENE-RITISEDGNLRI 336

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
              ++ D+G YTC A        +   + V+ P +     + + V   +  V+       
Sbjct: 337 INVTKSDAGSYTCIATNHFGTASSTGNVIVKDPTKVMVPPSSMDVTVGESIVLPCQVTHD 396

Query: 429 QSLRGHFRGYKVQTWT--------EKD--------GEGSIRELIVNKGE---------ST 463
            SL   F      TWT        +KD        G+ S  +L++   +           
Sbjct: 397 HSLDIVF------TWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMV 450

Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYL 522
            T VDK   A+    R         GPP    +    E    T Q S    P   S   +
Sbjct: 451 QTSVDKLSVAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITM 501

Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
             ++   P      + + +Q+V           +P + D  T +A + GL P  +Y    
Sbjct: 502 YVIQARTP------FSVGWQAVN---------TVPDLVDGKTFTATVVGLNPWVEYEFRT 546

Query: 583 AGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
                 G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F 
Sbjct: 547 VAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFG 606

Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL 694
           Y + +R H     W    +     S  V  N+    F P+E+KV     + +G  S   L
Sbjct: 607 YVVAFRPHGK-MIWMLTVLASADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTL 665

Query: 695 IVNKGESTTTEVDKFVPASKNFARVLA 721
           + +  E  T       P +  FAR L+
Sbjct: 666 VYSAEEEPTK------PPASIFARSLS 686



 Score = 41.2 bits (95), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 21/192 (10%)

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
           RG  +GY+V+ W   D E + ++ I   G  T+T++     ++     V A+N A  GP 
Sbjct: 702 RGRIQGYEVKYWRHDDKEENAKK-IRTVGNQTSTKITNLKGSALYHLSVKAYNSAGTGPS 760

Query: 492 SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
           S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 761 SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNR 816

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
            +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P  + 
Sbjct: 817 QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIPKISN 866

Query: 606 DNVEGRGSTPNN 617
               G G++ +N
Sbjct: 867 SYARGSGASTSN 878



 Score = 39.7 bits (91), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 72/184 (39%), Gaps = 28/184 (15%)

Query: 233 GKTVVLTCRVFGAPKPEVN-----WIHNQ--KELTGGRYTILETGDLKITDVAFADSGEY 285
           G+ +VL C     P P        WI N+        R+   ETG+L I  V  +D G Y
Sbjct: 9   GQGMVLLC----GPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNY 64

Query: 286 TCFARNK------LG-----TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
           TC   N       LG       +  G +   E       PE    E G +    C A+ +
Sbjct: 65  TCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGN 124

Query: 335 PSLKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393
           P    +I+W R   +PI  ++  R  +SN   L +    + D+G Y C A+       A+
Sbjct: 125 PV--PTILWRRADGKPIARKA--RRHKSNGI-LEIPNFQQEDAGSYECVAENSRGKNVAK 179

Query: 394 ATLT 397
             LT
Sbjct: 180 GQLT 183


>gi|402859578|ref|XP_003894229.1| PREDICTED: contactin-3-like, partial [Papio anubis]
          Length = 832

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 164/609 (26%), Positives = 263/609 (43%), Gaps = 47/609 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P   S +I    +   L I + +  D GSY 
Sbjct: 232 AAKGSTVKLECFALGNPIPQINWRRSDGLPF--SSKIKLRKFNGVLEIPNFQQEDAGSYE 289

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    + +  A E+++ +EC+ASG P+P   W+ NG
Sbjct: 290 CIAENSRGKNVARG-RLTYYAKPHWVQLIKDVETAVEDSLYWECRASGKPKPSYRWLKNG 348

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +       R ++    +TI NL  +D+G + C A N  G VY    + V+A AP+ ++
Sbjct: 349 AALVL---EERIQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSK 405

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
            P  +      G  V L C+   +P+   +W      +    R ++L+ G LKI +V  A
Sbjct: 406 NPMKKLVQVQVGSLVSLDCKPRASPRARSSWKKGDVSVQEHARISLLKDGGLKIANVTKA 465

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L + 
Sbjct: 466 DAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDII 525

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 526 FTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADL 585

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
            V+     P N  + ++ D   A +SW       +PV   S++       G++  T    
Sbjct: 586 IVRGSPGPPENVKVDEITDT-TAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTIT---- 640

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 641 ----TVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 694

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S      GS S   + W  V  E  NG   GY + ++ +  T     ++ +    D 
Sbjct: 695 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTT---WIQTVVTSPDT 751

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y + +  Y   G+G  S    +F     P   P  V     + + 
Sbjct: 752 PRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSE 811

Query: 618 LVISWTAMP 626
           + +SW  +P
Sbjct: 812 IEVSWNTIP 820



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 156/618 (25%), Positives = 243/618 (39%), Gaps = 48/618 (7%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V  A+       ++           P   V+ PE + AA
Sbjct: 174 LYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 233

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P S      + +     + I N ++ D G+Y C
Sbjct: 234 KGSTVKLECFALGNPIPQINWRRSDGLPFSS---KIKLRKFNGVLEIPNFQQEDAGSYEC 290

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K+V    L +   P   +  KD  T    ++   CR  G PKP   W+ N
Sbjct: 291 IAENSRG---KNVARGRLTYYAKPHWVQLIKDVETAVEDSLYWECRASGKPKPSYRWLKN 347

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
              L       +E G L I++++  DSG + C A NK G    S  L  V      +  P
Sbjct: 348 GAALVLEERIQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNP 407

Query: 315 ED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
                +V+ G   +  C   + P  + S  W +G   +  +   R     D  L +   +
Sbjct: 408 MKKLVQVQVGSLVSLDCKPRASPRARSS--WKKGD--VSVQEHARISLLKDGGLKIANVT 463

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQ 429
           + D+G YTC A+ +         L V  P     APSN   + V   +  ++        
Sbjct: 464 KADAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSN---MDVSVGESVILPCQVQHDP 520

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
            L   F  Y      +   +GS  E +   G S+   + + +    +   V       + 
Sbjct: 521 LLDIIFTWYFNGALADFKKDGSHFEKV--GGSSSGDLMIRNIQLKHSGKYVCMVQTGVDS 578

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
             S     V   G PG  ++++   +  +   L W + +  +  ++ Y I  Q+     V
Sbjct: 579 VSSAADLIV--RGSPGPPENVKVDEITDTTAQLSWKEGKDNHSPVISYSI--QARTPFSV 634

Query: 550 G-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPF 602
           G   +  +P + D  T +A +  L P  +Y   +    K G G  S      +    VP 
Sbjct: 635 GWQTITTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 694

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
             P  V G G + + LVI+W  +PE   N   F Y + +R       W Q  V       
Sbjct: 695 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGV-TTWIQTVVTSPDTPR 753

Query: 663 LVLANQPT--FQPYEIKV 678
            V  N+    + PYE+KV
Sbjct: 754 YVFRNESIVPYSPYEVKV 771



 Score = 39.7 bits (91), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 19/161 (11%)

Query: 252 WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGS---LTV 304
           WI N+     E    R+   ETG L I+ V  +D G YTC   + +  A+  GS   L +
Sbjct: 150 WIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPLVL 209

Query: 305 KEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           +    + +         PE      G +    C A+ +P  +++  W R S+ + F S+ 
Sbjct: 210 RSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQIN--WRR-SDGLPFSSKI 266

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +  + N   L +    + D+G Y C A+       A+  LT
Sbjct: 267 KLRKFNGV-LEIPNFQQEDAGSYECIAENSRGKNVARGRLT 306


>gi|332815947|ref|XP_001137194.2| PREDICTED: contactin-6 isoform 1 [Pan troglodytes]
          Length = 956

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 182/715 (25%), Positives = 303/715 (42%), Gaps = 76/715 (10%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    + S+      L I + +  D+G Y 
Sbjct: 167 AAKDSSVKLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQ--AILEIPNFQQEDEGFYE 224

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C  SN  G   +    L   A P +  + +    +  + + +ECKASG P P   W+ NG
Sbjct: 225 CIASNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDNLLWECKASGKPNPWYTWLKNG 283

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++   P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 284 ERLN---PEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSK 340

Query: 224 AP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
           +P  K  +   G  +V+ C+  G P+  ++W    + L    R  +LE G LKI ++  +
Sbjct: 341 SPVKKKSFVQVGGDIVIGCKPNGFPRAAISWKRGTETLRQSKRVFLLEDGSLKIYNITRS 400

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ GTA+ +GSL VKE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 401 DAGSYTCIATNQFGTAKNTGSLIVKERTVITVPPSKMDVTVGESIVLPCQVSHDPSIEVV 460

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            VW    + ID +       R    +   L +       SG+Y C  QT L+ + A A +
Sbjct: 461 FVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADI 520

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW    P +     + + +QT T          ++
Sbjct: 521 IVRGPPGPPEDVQ-VEDISSTTSQLSWR-AGPDN-NSPIQIFTIQTRTPFSVGWQAVATV 577

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA 512
            E++   G++    V    P  +   RV+A N    G PSE    +  +     V  +  
Sbjct: 578 PEIL--NGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNI 635

Query: 513 IPLGS--SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
              G   S   + W  +  E  NG   GY I ++ V  T      E++  + + +    +
Sbjct: 636 HGGGGSRSELVITWESIPEELQNGEGFGYIIMFRPVGSTTWSK--EKVSSV-ESSRFVYR 692

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS-----TPNNLVISWT 623
              + P + + + +  Y   G+G+ S        ++   +  RG+     + + + +SW 
Sbjct: 693 NESIIPLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSLQSFSASEMEVSWN 752

Query: 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWT 683
           A+                       AWN       R +  VL        YE   V  WT
Sbjct: 753 AI-----------------------AWN-------RNTGRVLG-------YE---VLYWT 772

Query: 684 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           +   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S  ++  T
Sbjct: 773 DDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGTGPSSPPVNVTT 826



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 163/660 (24%), Positives = 258/660 (39%), Gaps = 87/660 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC ++N   EA+      SV   P   V+                
Sbjct: 108 NLYIAKVEPSDVGNYTCFITNK--EAQR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 160

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ +V  EC A G P P+I W   +G P+   P   +       + I N ++
Sbjct: 161 FPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPL---PGKVKYSKSQAILEIPNFQQ 217

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A+N  G       + +    PE  +  ++ Y      ++  C+  G P P 
Sbjct: 218 EDEGFYECIASNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDNLLWECKASGKPNPW 276

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L       +E G L IT +  +DSG Y C A NK      +  L V     
Sbjct: 277 YTWLKNGERLNPEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAP 336

Query: 309 HITDQPEDYE--VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P   +  V+ G      C     P  + +I W RG+E +      R     D SL
Sbjct: 337 DFSKSPVKKKSFVQVGGDIVIGCKPNGFP--RAAISWKRGTETL--RQSKRVFLLEDGSL 392

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV------ 420
            +   +  D+G YTC A  +    +   +L V+         T+I V  +K  V      
Sbjct: 393 KIYNITRSDAGSYTCIATNQFGTAKNTGSLIVK-------ERTVITVPPSKMDVTVGESI 445

Query: 421 -----VSWNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKF 470
                VS +P         F G  +         E+ G  S+ +L++   +       K+
Sbjct: 446 VLPCQVSHDPSIEVVFVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQ--LHHSGKY 503

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
           +   +     L+            ++ +   G PG  + ++   + S+   L W      
Sbjct: 504 LCTVQTTLESLS-----------AVADIIVRGPPGPPEDVQVEDISSTTSQLSWRAGPDN 552

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           N  +  + I  Q+     VG   +  +P I +  T +A + GL P  +Y   +      G
Sbjct: 553 NSPIQIFTI--QTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIG 610

Query: 590 DG--AESKYLFY----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  +E   L      VP   P N+ G G + + LVI+W ++PE   N   F Y I +R 
Sbjct: 611 IGEPSEPSELLRTKASVPVVAPVNIHGGGGSRSELVITWESIPEELQNGEGFGYIIMFRP 670

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
             +   W+++ V     S  V  N+      P+E+KV       +GEGS+  + IV  GE
Sbjct: 671 VGS-TTWSKEKVSSVESSRFVYRNESIIPLSPFEVKV--GVYNNEGEGSLSTVTIVYSGE 727



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 153/642 (23%), Positives = 249/642 (38%), Gaps = 87/642 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +NP +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 267 CKASGKPNPWYTWLKNGERLNPEERIQIEN--GTLIITMLNVSDSGVYQCAAENKY-QII 323

Query: 115 SYSIDLSVLA-APYFTVEP----EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
             + +L VLA AP F+  P     F+    +  +   CK +G P   I W    + + Q+
Sbjct: 324 YANAELRVLASAPDFSKSPVKKKSFVQVGGD--IVIGCKPNGFPRAAISWKRGTETLRQS 381

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
                 + G   + I N+ +SD G+Y C ATN  G   K+    ++     IT  P    
Sbjct: 382 KRVFLLEDG--SLKIYNITRSDAGSYTCIATNQFGTA-KNTGSLIVKERTVITVPPSKMD 438

Query: 230 TVDGKTVVLTCRVFGAPKPEVN--WIHN-----------QKELTGGRYTILETGDLKITD 276
              G+++VL C+V   P  EV   W  N             E  GG       GDL I +
Sbjct: 439 VTVGESIVLPCQVSHDPSIEVVFVWFFNGDVIDLKKGVAHFERIGGE----SVGDLMIRN 494

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSD 334
           +    SG+Y C  +  L +      + V+        PED +VE   S T + +  A  D
Sbjct: 495 IQLHHSGKYLCTVQTTLESLSAVADIIVRGPP---GPPEDVQVEDISSTTSQLSWRAGPD 551

Query: 335 PSLKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            +  + I  ++   P         + P  +    Y+ TV   S     ++   A   +  
Sbjct: 552 NNSPIQIFTIQTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGI 611

Query: 390 IEAQ-----ATLTVQVPLEAPSNFTLIQVIDAKKA--VVSWNPVSPQSLRGHFRGYKVQ- 441
            E             VP+ AP N   I      ++  V++W  +  +   G   GY +  
Sbjct: 612 GEPSEPSELLRTKASVPVVAPVN---IHGGGGSRSELVITWESIPEELQNGEGFGYIIMF 668

Query: 442 ------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
                 TW+++          V + ES        +P S    +V  +N    G  S + 
Sbjct: 669 RPVGSTTWSKEKVSSVESSRFVYRNES-------IIPLSPFEVKVGVYNNEGEGSLSTVT 721

Query: 496 SFVTPEGVP-----GT-VQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGT 547
              + E  P     GT +QS  A  +  S   + W    +  G ++GY++ Y     K +
Sbjct: 722 IVYSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDSKES 778

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PF 602
            +G +      +S   TT   + GL+ +T Y   +  Y  AG G  S  +        P 
Sbjct: 779 MIGKI-----RVSGNVTTK-NITGLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPS 832

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           + P N+  +  T + L ++W  +  +E+ +    Y+I +R++
Sbjct: 833 QPPANIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQN 873



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 14/190 (7%)

Query: 409 TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
           T +Q   A +  VSWN ++     G   GY+V  WT+   E  I ++ V+ G  TT  + 
Sbjct: 737 TSLQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVS-GNVTTKNIT 795

Query: 469 KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VK 526
                +  FA V A+N A  GP S  ++  T +  P    +  A  L +S   L W  VK
Sbjct: 796 GLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLTNSKLCLNWEHVK 855

Query: 527 PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGY 585
             +    ++GYKI Y+  + +K         +I +   TSA+L  L P    Y I +   
Sbjct: 856 TMENESEVLGYKILYRQNRQSKT--------HILETNNTSAEL--LVPFEEDYLIEIRTV 905

Query: 586 TKAGDGAESK 595
           +  GDG+ S+
Sbjct: 906 SDGGDGSSSE 915



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 81/214 (37%), Gaps = 29/214 (13%)

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPE 249
           D G Y C ATN LG +         A+  +     +   +V +G+ VVL C     P P 
Sbjct: 22  DIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLC----GPPPH 77

Query: 250 VN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCFARNKLG--TAQG 298
                  W  N   L       R+   ETG+L I  V  +D G YTCF  NK    + QG
Sbjct: 78  FGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQG 137

Query: 299 SGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEP 349
             +  V+    +  +         PE  +     S    C A+ +P   +S   L GS  
Sbjct: 138 PPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGS-- 195

Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
                + ++ +S    L +    + D G Y C A
Sbjct: 196 -PLPGKVKYSKSQAI-LEIPNFQQEDEGFYECIA 227


>gi|380808946|gb|AFE76348.1| neural cell adhesion molecule L1-like protein precursor [Macaca
           mulatta]
          Length = 1225

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 180/713 (25%), Positives = 293/713 (41%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 269 LKGETLLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYGKTLKIENVSYQDKGNYRCT 327

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG P
Sbjct: 328 ASNFLGTA-THDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 386

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           I   P      V P  I+  NL+ + T  Y C A+N  G +     V+V+   P I    
Sbjct: 387 IDNHP-FAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILASANVDVVDVRPLIQTKD 445

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            + Y TV G +  L C  F +P+  V+W  +   K L G RY + + G L+I      D+
Sbjct: 446 GENYATVVGYSAFLHCEFFASPEAVVSWQKVEEAKPLEGRRYHVYDNGTLQINRTTEEDA 505

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L 
Sbjct: 506 GSYSCWVENAIGKTAVTANLDIRNATQLRVSPKNPRIPKLHMLELHCESKCDLHLKHSLK 565

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y C A T LD       +TV 
Sbjct: 566 LSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVL 625

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   +SW   +      +   Y V+    K+  G   EL   +
Sbjct: 626 DVPDPPENLHLSERQN-RSVRLSWE--AGDDHNSNISEYIVEFEGNKEDPGRWEELTRVQ 682

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 683 GKKTTV-ILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 741

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 742 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 792

Query: 576 T--KYRIHLAGYTKAGDG-AESKYLFYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G A      Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 793 VYAPYDVKVQAINQLGSGPAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKD 852

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ V++        
Sbjct: 853 RVHGRLKGYQINW--------WKTKSLLDGRT-----------HPKEVNVLRF------- 886

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 887 ---------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTPEG 930



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 142/648 (21%), Positives = 257/648 (39%), Gaps = 71/648 (10%)

Query: 54  FCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113
           +C F   P  +TI  K  +P+              L +  ++ ++  S + E+ +     
Sbjct: 202 YCCFAAFPRLRTIVQK--MPM-------------KLTVNSLKHANDSSSSTEIGSKANSI 246

Query: 114 KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           K     L  L  P  +     I   + ET+  EC A GLP P++ W   G  + +     
Sbjct: 247 KQRKPKL--LLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKG---- 300

Query: 174 RRKVGPN---RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
            R+   N    + IEN+   D GNY C A+N LG    D +V ++   P  T+ P+    
Sbjct: 301 -RETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHV-IVEEPPRWTKKPQSAVY 358

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCF 288
             G   +L C   G P+P + W  N   +    +   ++   ++  T++    +  Y C 
Sbjct: 359 STGSNGILLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTAVYQCE 418

Query: 289 ARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           A N  GT   S ++ V +   +  T   E+Y    G SA   C   + P   +S  W + 
Sbjct: 419 ASNVHGTILASANVDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS--WQKV 476

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE--- 403
            E    E   R+   ++ +L + +++E D+G Y+C  +  +      A L ++   +   
Sbjct: 477 EEAKPLEGR-RYHVYDNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNATQLRV 535

Query: 404 APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG------SIRELIV 457
           +P N  +      K  ++  +  S   L  H +     +W+ KDGE           +I+
Sbjct: 536 SPKNPRI-----PKLHMLELHCESKCDL--HLKHSLKLSWS-KDGEAFEINGTEDGRIII 587

Query: 458 NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS 517
           +    T + V          + + A + A +      I+ VT   VP   ++L      +
Sbjct: 588 DGANLTISNVTLEDQGIYCCSALTALDSAAD------ITQVTVLDVPDPPENLHLSERQN 641

Query: 518 SAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPST 576
            +  L W   +  N  +  Y ++++   G K  P   E L  +    TT   +  L P  
Sbjct: 642 RSVRLSWEAGDDHNSNISEYIVEFE---GNKEDPGRWEELTRVQGKKTTV--ILPLAPFV 696

Query: 577 KYRIHLAGYTKAGDGAESKYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEH 630
           +Y+  +    + G    S+   +       P +NP N+  + S P  ++I W  +  +E 
Sbjct: 697 RYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQ 756

Query: 631 NAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           N P  +YR+ W+       W ++ V +     L +     + PY++KV
Sbjct: 757 NGPGLEYRVTWKPQGAPVEWEEETVTN---HTLRVMTPAVYAPYDVKV 801



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 132/577 (22%), Positives = 228/577 (39%), Gaps = 55/577 (9%)

Query: 53   LFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L C F  +P     W K  +  P+    R    + G +L I      D GSY+C V N +
Sbjct: 459  LHCEFFASPEAVVSWQKVEEAKPLE-GRRYHVYDNG-TLQINRTTEEDAGSYSCWVENAI 516

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--------WVHN 162
            G+  + + +L +  A    V P+     +   +   C++      ++H        W  +
Sbjct: 517  GKT-AVTANLDIRNATQLRVSPKNPRIPKLHMLELHCESKC----DLHLKHSLKLSWSKD 571

Query: 163  GKPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
            G+        + R  +    +TI N+   D G Y C+A  +L        V VL    ++
Sbjct: 572  GEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVL----DV 627

Query: 222  TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG-----GRYTILETGDLKITD 276
             + P++ +  + +   +            N      E  G     GR+  L     K T 
Sbjct: 628  PDPPENLHLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEDPGRWEELTRVQGKKTT 687

Query: 277  VAFADSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSAT---- 326
            V    +     ++   A N++G +Q S      E         P++  V+A Q       
Sbjct: 688  VILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIK 747

Query: 327  ---FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
                +    + P L+  + W     P+++E E       +++L V   +         +A
Sbjct: 748  WEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TVTNHTLRVMTPAVYAPYDVKVQA 803

Query: 384  QTELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
              +L    A  ++T+    + P    +I    VI++    V+W+ +    + G  +GY++
Sbjct: 804  INQLGSGPAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQI 863

Query: 441  QTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
              W  K   DG    +E+ V +  G+  +  V      S+    VLA+N    GP SE  
Sbjct: 864  NWWKTKSLLDGRTHPKEVNVLRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPY 923

Query: 496  SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE 554
             F TPEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T ++G L +
Sbjct: 924  IFQTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGNLTGYLLQYQIINDTYEIGELND 983

Query: 555  RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
                I+ P+  S  L+ L  +TKY+ +L   T  G G
Sbjct: 984  I--NITTPSKPSWHLSNLNATTKYKFYLRACTSRGCG 1018



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 110/430 (25%), Positives = 173/430 (40%), Gaps = 62/430 (14%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P   W+KDG P + +D   I+  N G   I      S  QG Y C  SN
Sbjct: 54  QIECEAKGNPEPTFTWTKDGNPFHFTDHRIITSNNSGTFRIPNEGHISHFQGKYRCFASN 113

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKP 165
            +G A S  I+  V + P F  E  + +   E + +   C    GLP   I+W++   + 
Sbjct: 114 KLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEH 173

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA- 218
           I Q       + G   +   N+ + D+ N Y C A        +  +   + VN L HA 
Sbjct: 174 IEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHAN 231

Query: 219 -------------------PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWI 253
                              P++   P +  +      + G+T++L C   G P P+V+W 
Sbjct: 232 DSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWN 291

Query: 254 HNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD 312
               +L  GR T    G  LKI +V++ D G Y C A N LGTA     + V+E    T 
Sbjct: 292 KIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTK 351

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID---------FESEPRF--VQS 361
           +P+      G +    C A  +P  + +I W     PID         F  E  F  +Q 
Sbjct: 352 KPQSAVYSTGSNGILLCEAEGEP--QPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQP 409

Query: 362 NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDA 416
           N  ++   ++S +     T  A   +D ++ +  +  +       +   S F   +   +
Sbjct: 410 NHTAVYQCEASNVHG---TILASANVDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFAS 466

Query: 417 KKAVVSWNPV 426
            +AVVSW  V
Sbjct: 467 PEAVVSWQKV 476



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 84/363 (23%), Positives = 126/363 (34%), Gaps = 58/363 (15%)

Query: 86  GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTF 145
           GK LII  + F  + S   E+   V +  +      V  A  F           +E    
Sbjct: 7   GKGLIISLIFFLLKFSTAIEIPPSVQQVPTIIKQSKVQVAFPF-----------DEYFQI 55

Query: 146 ECKASGLPEPEIHWVHNGKPISQAPPN--PRRKVGPNRITIENLRKSDTGNYGCNATNSL 203
           EC+A G PEP   W  +G P              G  RI  E       G Y C A+N L
Sbjct: 56  ECEAKGNPEPTFTWTKDGNPFHFTDHRIITSNNSGTFRIPNEGHISHFQGKYRCFASNKL 115

Query: 204 GYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHNQKELT- 260
           G    +    ++   P+  +   D   V +G  +VL C    G P   + W++ + E   
Sbjct: 116 GIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEHIE 175

Query: 261 -GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTHITDQPE 315
              R  + + GDL   +V   DS  +Y CFA   R +    +    LTV    H  D   
Sbjct: 176 QDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHANDSSS 235

Query: 316 DYEVEA-----------------------------GQSATFRCNAVSDPSLKLSIVWLRG 346
             E+ +                             G++    C A   P+ ++    + G
Sbjct: 236 STEIGSKANSIKQRKPKLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGG 295

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPS 406
             P   E++  + +    +L +   S  D G Y C A   L      AT    V +E P 
Sbjct: 296 DLPKGRETKENYGK----TLKIENVSYQDKGNYRCTASNFL----GTATHDFHVIVEEPP 347

Query: 407 NFT 409
            +T
Sbjct: 348 RWT 350


>gi|296475002|tpg|DAA17117.1| TPA: contactin-3-like [Bos taurus]
          Length = 1081

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 170/632 (26%), Positives = 272/632 (43%), Gaps = 50/632 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P   S +I    +   L I + +  D GSY 
Sbjct: 292 AAKGSTVKLECFALGNPVPQINWRRSDGLPF--SSKIKLRKFSGVLEIPNFQQEDSGSYE 349

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    + +  A E+++ +EC+ASG P+P   W+ NG
Sbjct: 350 CIAENSRGKNVARG-RLTYYAKPHWVQLIKDVELAVEDSLYWECRASGKPKPSYRWLKNG 408

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + +       R ++    +TI NL  +D+G + C A N  G VY    + V+A AP+ ++
Sbjct: 409 EALVL---EERIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVMASAPDFSK 465

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
            P  +      G  V L C+   +P+   +W   +  +    R + L  G LKI +V  A
Sbjct: 466 TPMKKLIQVQVGSEVNLDCKPRASPRALSSWKKGEVIVQENERTSFLNDGGLKIVNVTKA 525

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L   
Sbjct: 526 DAGIYTCIAENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLATM 585

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF  +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 586 FTWYFNGALADFRKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADL 645

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
            V+     P +  + ++ D   A +SW       +PV   S++       G++  T    
Sbjct: 646 IVRGSPGPPESVKVDEITDT-TAQLSWKEGTDNHSPVIAYSVQARTPFSVGWQTAT---- 700

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 701 ----TVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 754

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S  +   GS S   + W  V  E  NG   GY + ++ +  T     ++ +    D 
Sbjct: 755 VPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTN---WIQTVVTSPDT 811

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y + +  Y   G+G  S    +F     P   P  V     + + 
Sbjct: 812 PRYIFRNESILPFSLYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTTAPSQVSANSLSSSE 871

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FWRRHNTGE 648
           + +SW A+P    N     Y + +W  +N GE
Sbjct: 872 IEVSWNAIPWKLSNGHLLGYEVRYW--NNGGE 901



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 159/637 (24%), Positives = 242/637 (37%), Gaps = 86/637 (13%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V  A+       ++           P   V+ PE + AA
Sbjct: 234 LYIAKVEPSDVGNYTCVVTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 293

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P S      + +     + I N ++ D+G+Y C
Sbjct: 294 KGSTVKLECFALGNPVPQINWRRSDGLPFSS---KIKLRKFSGVLEIPNFQQEDSGSYEC 350

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K+V    L +   P   +  KD       ++   CR  G PKP   W+ N
Sbjct: 351 IAENSRG---KNVARGRLTYYAKPHWVQLIKDVELAVEDSLYWECRASGKPKPSYRWLKN 407

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITD 312
            + L       +E G L I+++   DSG + C A NK G    S  L V         T 
Sbjct: 408 GEALVLEERIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVMASAPDFSKTP 467

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
             +  +V+ G      C   + P    S  W +G   +       F+  ND  L +   +
Sbjct: 468 MKKLIQVQVGSEVNLDCKPRASPRALSS--WKKGEVIVQENERTSFL--NDGGLKIVNVT 523

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAV-----VSWN 424
           + D+G YTC A+ +         L V  P     APSN      +   ++V     V  +
Sbjct: 524 KADAGIYTCIAENQFGKANGTTHLVVTEPTRITLAPSNMD----VSVGESVILPCQVQHD 579

Query: 425 PVSPQSLRGHFRG-----YKVQTWTEKDGEGSIRELIVNKGE---------STTTEVDKF 470
           P+       +F G      K  +  EK G  S  +L++   +            T VD  
Sbjct: 580 PLLATMFTWYFNGALADFRKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSV 639

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
             A+    R                      G PG  +S++   +  +   L W +    
Sbjct: 640 SSAADLIVR----------------------GSPGPPESVKVDEITDTTAQLSWKEGTDN 677

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           +  ++ Y +  Q+     VG      +P + D  T +A +  L P  +Y   +    K G
Sbjct: 678 HSPVIAYSV--QARTPFSVGWQTATTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIG 735

Query: 590 DGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  S      +    VP   P  V G G + + LVI+W  +PE   N   F Y + +R 
Sbjct: 736 GGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRP 795

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
                 W Q  V        +  N+    F  YE+KV
Sbjct: 796 LGVTN-WIQTVVTSPDTPRYIFRNESILPFSLYEVKV 831



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 167/732 (22%), Positives = 281/732 (38%), Gaps = 112/732 (15%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  +   +RI   N   +L I ++  +D G + C   N  G   
Sbjct: 392  CRASGKPKPSYRWLKNGEALVLEERIQIEN--GALTISNLNVTDSGMFQCIAENKHGLVY 449

Query: 115  SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
            S S +L V+A AP F+  P  + I       V  +CK    P     W   G+ I Q   
Sbjct: 450  S-SAELKVMASAPDFSKTPMKKLIQVQVGSEVNLDCKPRASPRALSSW-KKGEVIVQE-- 505

Query: 172  NPRRK-VGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
            N R   +    + I N+ K+D G Y C A N  G      ++ V+     IT AP +   
Sbjct: 506  NERTSFLNDGGLKIVNVTKADAGIYTCIAENQFGKANGTTHL-VVTEPTRITLAPSNMDV 564

Query: 231  VDGKTVVLTCRVFGAP--KPEVNWIHN-----------QKELTGGRYTILETGDLKITDV 277
              G++V+L C+V   P       W  N             E  GG      +GDL I ++
Sbjct: 565  SVGESVILPCQVQHDPLLATMFTWYFNGALADFRKDGSHFEKVGGS----SSGDLMIRNI 620

Query: 278  AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
                SG+Y C  +  + +   +  L V+                G   + + + ++D + 
Sbjct: 621  QLKHSGKYVCMVQTGVDSVSSAADLIVRG-------------SPGPPESVKVDEITDTTA 667

Query: 338  KLSIVWLRGSEP----IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ-----TELD 388
            +LS  W  G++     I +  + R   S  +    T    +D   +T          E +
Sbjct: 668  QLS--WKEGTDNHSPVIAYSVQARTPFSVGWQTATTVPEVIDGKTHTATVVELNPWVEYE 725

Query: 389  F--------------IEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
            F              + ++   T +   E P +          + V++W+PV  +   G 
Sbjct: 726  FRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGE 785

Query: 435  FRGYKVQTWTEKDGEGSIREL-IVNKGESTTTEVD---------KFVPASKNFARVLAFN 484
              GY V          + R L + N  ++  T  D           +P S    +V  +N
Sbjct: 786  GFGYVV----------AFRPLGVTNWIQTVVTSPDTPRYIFRNESILPFSLYEVKVGVYN 835

Query: 485  GAYNGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKY 541
                GP S + +  + E  P T  S + A  L SS   + W  +  +  NG L+GY+++Y
Sbjct: 836  NKGEGPFSPVTTVFSAEEEPTTAPSQVSANSLSSSEIEVSWNAIPWKLSNGHLLGYEVRY 895

Query: 542  QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV- 600
             +  G +      +L    +   TSA+L GL+ +  Y   +  +  AG G  S  +    
Sbjct: 896  WNNGGEEDSS--SKLKVAGN--VTSARLRGLKSNLAYYTAVRAFNSAGTGPFSATVNATT 951

Query: 601  ----PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVL 656
                P + P NV    +T   ++++W  +  +E+ +    Y++F+R  +     N   VL
Sbjct: 952  KKTPPSQPPGNVVWN-ATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQ----NNVQVL 1006

Query: 657  DWRQ--SELVLANQPTFQPYEIKVVQTWTEKDGEGS----IRELIVNKGESTTTEVDKFV 710
            +  +  +EL+L   P  + Y I+V  T    DG  S    I  +        T+ +    
Sbjct: 1007 NTNKTSAELLL---PIKEDYIIEVKATTDGGDGTSSEQIRIPRITNMDARGCTSAISTVY 1063

Query: 711  PASKNFARVLAF 722
            P S   + ++ F
Sbjct: 1064 PVSSYVSVIMFF 1075



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 182/451 (40%), Gaps = 47/451 (10%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSD----RISQGNYGKSLIIKHVEFSDQ 99
           V   +KK+ L C   G P P   W  +G  I+ S     ++ +GN    ++I      D 
Sbjct: 92  VGSEDKKITLNCEARGNPSPHYRWQLNGSDIDLSMEYRYKLIRGNL---VVINPNRNWDT 148

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----E 154
           G+Y C  +N VG   S    L       F T     ++  E + V   C   G P    E
Sbjct: 149 GNYQCFATNSVGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLC---GPPPHSGE 205

Query: 155 PEIHWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDV 210
               W+ N  P S    + RR V      + I  +  SD GNY C  T+++    V    
Sbjct: 206 LSYAWIFNEYP-SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNARVLGSP 264

Query: 211 YVNVL-------AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG 262
              VL        + P+I  + P+      G TV L C   G P P++NW  +       
Sbjct: 265 TPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVPQINWRRSDGLPFSS 324

Query: 263 RYTILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA 321
           +  + + +G L+I +    DSG Y C A N  G     G LT     H     +D E+  
Sbjct: 325 KIKLRKFSGVLEIPNFQQEDSGSYECIAENSRGKNVARGRLTYYAKPHWVQLIKDVELAV 384

Query: 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTC 381
             S  + C A   P  K S  WL+  E +  E     +Q  + +LT++  +  DSG + C
Sbjct: 385 EDSLYWECRASGKP--KPSYRWLKNGEALVLEER---IQIENGALTISNLNVTDSGMFQC 439

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFT------LIQVIDAKKAVVSWNP-VSPQSLRGH 434
            A+ +   + + A L V   + +  +F+      LIQV    +  +   P  SP++L   
Sbjct: 440 IAENKHGLVYSSAELKV---MASAPDFSKTPMKKLIQVQVGSEVNLDCKPRASPRALSSW 496

Query: 435 FRGYKVQTWTEKDG---EGSIRELIVNKGES 462
            +G  +    E+     +G ++ + V K ++
Sbjct: 497 KKGEVIVQENERTSFLNDGGLKIVNVTKADA 527



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 124/300 (41%), Gaps = 32/300 (10%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +E++ +T  C+A G P P   W  NG  I  +     + + 
Sbjct: 75  LLQGPVFVKEPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDIDLSMEYRYKLIR 134

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N + I   R  DTGNY C ATNS+G +         A+        +   +V +G+ VV
Sbjct: 135 GNLVVINPNRNWDTGNYQCFATNSVGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVV 194

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        WI N+     E    R+   ETG L I  V  +D G YTC 
Sbjct: 195 LLC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCV 250

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
             + +  A+  GS   L ++    + +         PE      G +    C A+ +P  
Sbjct: 251 VTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVP 310

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +++  W R S+ + F S+ +  + +   L +    + DSG Y C A+       A+  LT
Sbjct: 311 QIN--WRR-SDGLPFSSKIKLRKFSGV-LEIPNFQQEDSGSYECIAENSRGKNVARGRLT 366


>gi|355786012|gb|EHH66195.1| Neural cell surface protein F3 [Macaca fascicularis]
          Length = 1018

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 186/728 (25%), Positives = 294/728 (40%), Gaps = 90/728 (12%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 241 PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 298

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 299 NIQLEDEGIYECEAENIRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 354

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 355 TGKPIPTIRWLKNGYAYHKG------ELRLYDVTFEN-----AGMYQCIAENTYGAIYAN 403

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 404 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 463

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 464 WEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENAT 523

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A SDP+L L+ VW      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 524 MQCAASSDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 583

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            AQT +D   A A L V+ P   P     I+ I A    ++W+  S          Y +Q
Sbjct: 584 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYTIQ 640

Query: 442 TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           T T    D + +  +  + +G          +P  +   RV+A N    G PS   + + 
Sbjct: 641 TKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNRIK 700

Query: 500 PEGVPGTVQSLEAIPLG--SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
            +G    V   +    G  +    + W  +  E   G   GY + ++   G +   +   
Sbjct: 701 TDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVT 760

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEG 610
            P   D      K   + PST +++ +  +   GDG  S           P + P  V  
Sbjct: 761 NP---DTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGV 817

Query: 611 RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT 670
           +  + + + + W  +  +E     ++ R +W  H+  EA N+  V              T
Sbjct: 818 KVLSSSEISVHWEHV--LEKIVESYQIR-YWAAHDKEEAANRVQV--------------T 860

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
            Q Y                            +  ++  +P ++ F  V A N A  GPP
Sbjct: 861 SQEY----------------------------SARLENLLPDTQYFIEVGACNSAGCGPP 892

Query: 731 SEIISFVT 738
           S+ I   T
Sbjct: 893 SDTIETFT 900



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 154/657 (23%), Positives = 245/657 (37%), Gaps = 85/657 (12%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 189 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVV 246

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  + A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 247 QFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 303

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N  G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 304 DEGIYECEAENIRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 362

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 363 RWLKN-----GYAY---HKGELRLYDVTFENAGMYQCIAENTYGAIYANAELKILALAPT 414

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   D SL 
Sbjct: 415 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 470

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC A+       +  TL +  P   + AP N  +    +A  +   S 
Sbjct: 471 INNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASS 530

Query: 424 NPVSPQSLRGHFRGYKVQ-----------TWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
           +P    +    F GY +               + +GE  IR   +      T      V 
Sbjct: 531 DPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVD 590

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
            S   A ++                    G PG    L    + +++  L W +    + 
Sbjct: 591 NSSASADLVV------------------RGPPGPPGGLRIEDIRATSVALTWSRGSDNHS 632

Query: 533 VLMGYKIKYQSV-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
            +  Y I+ +++     K  K  P     P I +    +A+   L P  +Y   +     
Sbjct: 633 PISKYTIQTKTILSDDWKDAKTDP-----PII-EGNMEAARAVDLIPWMEYEFRVVATNT 686

Query: 588 AGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            G G  S      K     P   P +V G G     L I+W  +    H   +F Y + +
Sbjct: 687 LGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAF 746

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
           +  + GE W +  V +      V  ++ T  P   +++KV     + DG  S+  +I
Sbjct: 747 KPFD-GEEWKKVTVTNPDTGRYVHKDE-TMSPSTAFQVKVKAFNNKGDGPYSLVAVI 801



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 140/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   ++  SDR S    G +L+I + +   D G Y C  S
Sbjct: 60  KVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 117

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 118 NSYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 171

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 172 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 228

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 229 LIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 288

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 289 STSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 348

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+       + E R      Y +T       ++G Y C A+ 
Sbjct: 349 YWPCVATGKPI--PTIRWLKNGYAY-HKGELRL-----YDVTFE-----NAGMYQCIAEN 395

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 396 TYGAIYANAELKI 408



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   +     +    VG N +   
Sbjct: 47  PINTIYPE---ESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTS-DRYSMVGGNLVINN 102

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+NS G V          +        + E  V +GK +VL C   +
Sbjct: 103 PDKQKDAGIYYCLASNSYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 162

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 163 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 222

Query: 299 SGSLT----VKEHT------HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                    + E T       I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 223 FSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV--PDIRWRKVLE 280

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 281 PMPSTAE---ISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 328



 Score = 41.2 bits (95), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+    ++V+ + +  V W  V    L      Y+++ W   D E +   + V   
Sbjct: 808 PSEAPTEVG-VKVLSSSEISVHWEHV----LEKIVESYQIRYWAAHDKEEAANRVQVTSQ 862

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GPPS+ I   T +  P     + +     S +
Sbjct: 863 E-YSARLENLLPDTQYFIEVGACNSAGCGPPSDTIETFTKKAPPSQPPRIISSIRSGSRY 921

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYK+ Y+
Sbjct: 922 IITWDHVVALSNESTVTGYKVLYR 945


>gi|403297272|ref|XP_003939499.1| PREDICTED: contactin-3 [Saimiri boliviensis boliviensis]
          Length = 1028

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 167/625 (26%), Positives = 267/625 (42%), Gaps = 48/625 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P   S +I    +   L I + +  D GSY 
Sbjct: 239 AAKGSTVKLECFALGNPIPQINWRRSDGLPF--SSKIKLRKFNGVLEIPNFQQEDAGSYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    +    A E+ + +EC+ASG P+P   W+ NG
Sbjct: 297 CIAENSRGKNVARG-RLTYYAKPHWVQLIKDAEIAVEDNLYWECRASGKPKPSYRWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +       R ++    +TI NL  +D+G + C A N  G +Y    + V+A AP+ ++
Sbjct: 356 AALVL---EERIQIENGALTISNLSVTDSGMFQCIAENKHGLIYSSAELKVVASAPDFSK 412

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
           +P  +      G  V L C+   +P     W      +    R T+L+ G+LKI +V  A
Sbjct: 413 SPMKKLVQVQVGSLVSLDCKPRASPTAHSFWKKGDVNVQEHERITLLKDGELKIANVTKA 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L + 
Sbjct: 473 DAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDII 532

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 533 FTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADL 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
            V+     P N  + ++ D   A +SW       +PV   S++       G++  T    
Sbjct: 593 IVRGSPGPPENVRVDEITDT-TAQLSWKEGTDNHSPVISYSIQARTPFSVGWQTIT---- 647

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 648 ----TVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S      GS S   + W  V  E  NG   GY + ++ +    V   ++ +    D 
Sbjct: 702 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPL---GVTTWIQTVVTSPDT 758

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y + +  Y   G+G  S    +F     P   P +V     + + 
Sbjct: 759 PRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSHVSANSLSSSE 818

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FW 641
           + +SW  +P    N     Y + +W
Sbjct: 819 IEVSWNTIPWKLSNGHLLGYEVRYW 843



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 167/729 (22%), Positives = 278/729 (38%), Gaps = 106/729 (14%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  +   +RI   N   +L I ++  +D G + C   N  G   
Sbjct: 339  CRASGKPKPSYRWLKNGAALVLEERIQIEN--GALTISNLSVTDSGMFQCIAENKHGLIY 396

Query: 115  SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
            S S +L V+A AP F+  P  + +       V+ +CK    P     W      + +   
Sbjct: 397  S-SAELKVVASAPDFSKSPMKKLVQVQVGSLVSLDCKPRASPTAHSFWKKGDVNVQEHER 455

Query: 172  NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
                K G   + I N+ K+D G Y C A N  G      ++ V+     IT AP +    
Sbjct: 456  ITLLKDG--ELKIANVTKADAGTYTCMAENQFGKANGTTHL-VVTEPTRITLAPSNMDVS 512

Query: 232  DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
             G++V+L C+V   P  ++   W  N             E  GG      +GDL I ++ 
Sbjct: 513  VGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGS----SSGDLMIRNIQ 568

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
               SG+Y C  +  + +   +  L V+                G     R + ++D + +
Sbjct: 569  LKHSGKYVCMVQTGVDSVSSAADLIVRG-------------SPGPPENVRVDEITDTTAQ 615

Query: 339  LSIVWLRGSEP----IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD------ 388
            LS  W  G++     I +  + R   S  +  T+T   E+  G+       EL+      
Sbjct: 616  LS--WKEGTDNHSPVISYSIQARTPFSVGWQ-TITTVPEVIDGKTHTATVVELNPWVEYE 672

Query: 389  --------------FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
                           + ++   T +   E P +          + V++W+PV  +   G 
Sbjct: 673  FRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGE 732

Query: 435  -------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
                   FR   V TW +           V + ES        VP S    +V  +N   
Sbjct: 733  GFGYVVAFRPLGVTTWIQTVVTSPDTPRYVFRNES-------IVPYSPYEVKVGVYNNKG 785

Query: 488  NGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSV 544
             GP S + +  + E  P    S + A  L SS   + W  +  +  NG L+GY+++Y + 
Sbjct: 786  EGPFSPVTTVFSAEEEPTVAPSHVSANSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNS 845

Query: 545  KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
             G +      ++        TSA+L GL+ +  Y   +  Y  AG G  S  +       
Sbjct: 846  GGKEESSSKVKVA----GNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSATVNATTKKT 901

Query: 601  -PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
             P + P NV    +T   ++++W  +  +E+ +    Y++F+R  +     N   VL+  
Sbjct: 902  PPSQPPGNVVWN-ATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQ----NNVQVLNTN 956

Query: 660  Q--SELVLANQPTFQPYEIKVVQTWTEKDGEGS----IRELIVNKGESTTTEVDKFVPAS 713
            +  +EL+L   P  + Y I+V  T    DG  S    I  +       +T+ +    P S
Sbjct: 957  KTSAELLL---PIKEDYIIEVKATTDGGDGTSSEQIRIPRITNMDARGSTSAISNVHPMS 1013

Query: 714  KNFARVLAF 722
                 VL F
Sbjct: 1014 GYMPIVLFF 1022



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 148/374 (39%), Gaps = 28/374 (7%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINP-SDRISQGNYGKSLIIKHVEFSDQGSY 102
           V   +KK+ L C   G PLP   W  +G  I+  ++   + N G  ++I      D G+Y
Sbjct: 39  VGSEDKKITLNCEARGNPLPHYRWQLNGSDIDTNTEHRYKLNGGNLVVINPNRNWDAGTY 98

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEI 157
            C  +N +G   S    L       F T     ++  E + V   C   G P    E   
Sbjct: 99  QCFATNSLGTIVSREAKLQFAYLDNFKTKMRSTVSVREGQGVVLLC---GPPPHSGELSY 155

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDVYVN 213
            W+ N  P S    + RR V      + I  +  SD GNY C  T+ +    V       
Sbjct: 156 AWIFNEYP-SFVEEDSRRFVSQETGHLYISKVEPSDVGNYMCVVTSMVTNARVLGSPTPL 214

Query: 214 VL-------AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           VL        + P+I  + P+      G TV L C   G P P++NW  +       +  
Sbjct: 215 VLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIK 274

Query: 266 ILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
           + +  G L+I +    D+G Y C A N  G     G LT     H     +D E+    +
Sbjct: 275 LRKFNGVLEIPNFQQEDAGSYECIAENSRGKNVARGRLTYYAKPHWVQLIKDAEIAVEDN 334

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             + C A   P  K S  WL+    +  E     +Q  + +LT++  S  DSG + C A+
Sbjct: 335 LYWECRASGKP--KPSYRWLKNGAALVLEER---IQIENGALTISNLSVTDSGMFQCIAE 389

Query: 385 TELDFIEAQATLTV 398
            +   I + A L V
Sbjct: 390 NKHGLIYSSAELKV 403



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 122/300 (40%), Gaps = 32/300 (10%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +E++ +T  C+A G P P   W  NG  I     +  +  G
Sbjct: 22  LLQGPVFIKEPSNSIFPVGSEDKKITLNCEARGNPLPHYRWQLNGSDIDTNTEHRYKLNG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N + I   R  D G Y C ATNSLG +         A+        +   +V +G+ VV
Sbjct: 82  GNLVVINPNRNWDAGTYQCFATNSLGTIVSREAKLQFAYLDNFKTKMRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        WI N+     E    R+   ETG L I+ V  +D G Y C 
Sbjct: 142 LLC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYMCV 197

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
             + +  A+  GS   L ++    + +         PE      G +    C A+ +P  
Sbjct: 198 VTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +++  W R S+ + F S+ +  + N   L +    + D+G Y C A+       A+  LT
Sbjct: 258 QIN--WRR-SDGLPFSSKIKLRKFNGV-LEIPNFQQEDAGSYECIAENSRGKNVARGRLT 313


>gi|403270430|ref|XP_003927185.1| PREDICTED: contactin-6 [Saimiri boliviensis boliviensis]
          Length = 1029

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 183/727 (25%), Positives = 301/727 (41%), Gaps = 100/727 (13%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    ++        L I + +  D+G Y 
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRWDGSPL--PGKVKYSKTQAILEIPNFQQEDEGFYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C  SN  G   +    L   A P +  + +    +  +++ +ECKASG P P   W+ NG
Sbjct: 297 CIASNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDSLLWECKASGKPNPWYTWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++   P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 356 ERLN---PEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSK 412

Query: 224 AP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
           +P  K+ +   G  +V+ C+    P+  ++W    + L    R  +LE G LKI +V  +
Sbjct: 413 SPVKKNSFVQVGGDIVIECKPNAFPRAAISWKRGMETLRQSKRIFLLEDGSLKIYNVTRS 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ GTA+ +GSL VKE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 473 DAGSYTCMATNQFGTAKNTGSLIVKERTVITIPPSKMDVTVGESIVLPCQVSHDPSIEVV 532

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            +W    + ID +       R    +   L +       SG+Y C  QT L+ + A A +
Sbjct: 533 FIWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADI 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW P  P +     + + +QT T          ++
Sbjct: 593 IVRGPPGPPEDVK-VEDISSTTSQLSWRP-GPDN-NSPIQIFTIQTRTPFSVGWQAVATV 649

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA 512
            E++   G++    V    P  +   RV+A N    G PS+    +  +     V  +  
Sbjct: 650 PEIL--NGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPINI 707

Query: 513 IPLGS--SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
              G   S   + W  +  E  NG   GY + ++ V  T               T T  K
Sbjct: 708 NGGGGSRSELVITWESIPEELQNGEGFGYIVMFRPVGST---------------TWTKEK 752

Query: 569 LAGLE------------PSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS--- 613
           +A  E            P + + + +  Y   G+G+ S        ++   +  RG+   
Sbjct: 753 VASAESSRFVYRNESIIPLSPFEVKVGVYNDEGEGSLSTVTIVYSGEDEPQLAPRGTSVQ 812

Query: 614 --TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
             + + + +SW A+                       AWN       R +  VL      
Sbjct: 813 SFSASEMEVSWNAI-----------------------AWN-------RNTGRVLG----- 837

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
             YE   V  WT+   E  I ++ V  G  TT  +      +  FA V A+N A  GP S
Sbjct: 838 --YE---VLYWTDDSKESMIGKIRVT-GNITTKNITGLKANTIYFASVRAYNTAGTGPSS 891

Query: 732 EIISFVT 738
             ++  T
Sbjct: 892 PPVNVTT 898



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 161/674 (23%), Positives = 254/674 (37%), Gaps = 115/674 (17%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC ++N   EA+      SV   P   V+                
Sbjct: 180 NLYIAKVEPSDVGNYTCFITNK--EAQR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 232

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ +V  EC A G P P+I W   +G P+   P   +       + I N ++
Sbjct: 233 FPETIQAAKDSSVKLECFALGNPVPDISWRRWDGSPL---PGKVKYSKTQAILEIPNFQQ 289

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A+N  G       + +    PE  +  ++ Y     +++  C+  G P P 
Sbjct: 290 EDEGFYECIASNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDSLLWECKASGKPNPW 348

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L       +E G L IT +  +DSG Y C A NK      +  L V     
Sbjct: 349 YTWLKNGERLNPEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAP 408

Query: 309 HITDQP--EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P  ++  V+ G      C   + P  + +I W RG E +      R     D SL
Sbjct: 409 DFSKSPVKKNSFVQVGGDIVIECKPNAFP--RAAISWKRGMETL--RQSKRIFLLEDGSL 464

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ---------------------VPLEAP 405
            +   +  D+G YTC A  +    +   +L V+                     +P +  
Sbjct: 465 KIYNVTRSDAGSYTCMATNQFGTAKNTGSLIVKERTVITIPPSKMDVTVGESIVLPCQVS 524

Query: 406 SN---------FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
            +         F    VID KK V  +  +  +S+                G+  IR + 
Sbjct: 525 HDPSIEVVFIWFFNGDVIDLKKGVAHFERIGGESV----------------GDLMIRNIQ 568

Query: 457 VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLG 516
           +N        V   + +    A ++                    G PG  + ++   + 
Sbjct: 569 LNHSGKYLCTVQTTLESLSAVADIIV------------------RGPPGPPEDVKVEDIS 610

Query: 517 SSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPS 575
           S+   L W      N  +  + I  Q+     VG   +  +P I +  T +A + GL P 
Sbjct: 611 STTSQLSWRPGPDNNSPIQIFTI--QTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPW 668

Query: 576 TKYRIHLAGYTKAGDGAESK------YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIE 629
            +Y   +      G G  SK          VP   P N+ G G + + LVI+W ++PE  
Sbjct: 669 VEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPININGGGGSRSELVITWESIPEEL 728

Query: 630 HNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDG 687
            N   F Y + +R   +   W ++ V     S  V  N+      P+E+KV       +G
Sbjct: 729 QNGEGFGYIVMFRPVGS-TTWTKEKVASAESSRFVYRNESIIPLSPFEVKV--GVYNDEG 785

Query: 688 EGSIREL-IVNKGE 700
           EGS+  + IV  GE
Sbjct: 786 EGSLSTVTIVYSGE 799



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 149/640 (23%), Positives = 247/640 (38%), Gaps = 83/640 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +NP +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 339 CKASGKPNPWYTWLKNGERLNPEERIQIEN--GTLIITMLNVSDSGVYQCAAENKY-QII 395

Query: 115 SYSIDLSVLA-APYFTVEP----EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
             + +L VLA AP F+  P     F+    +  +  ECK +  P   I W    + + Q+
Sbjct: 396 YANAELRVLASAPDFSKSPVKKNSFVQVGGD--IVIECKPNAFPRAAISWKRGMETLRQS 453

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
                 + G   + I N+ +SD G+Y C ATN  G   K+    ++     IT  P    
Sbjct: 454 KRIFLLEDG--SLKIYNVTRSDAGSYTCMATNQFGTA-KNTGSLIVKERTVITIPPSKMD 510

Query: 230 TVDGKTVVLTCRVFGAPKPEVN--WIHN-----------QKELTGGRYTILETGDLKITD 276
              G+++VL C+V   P  EV   W  N             E  GG       GDL I +
Sbjct: 511 VTVGESIVLPCQVSHDPSIEVVFIWFFNGDVIDLKKGVAHFERIGGE----SVGDLMIRN 566

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT----FRCNAV 332
           +    SG+Y C  +  L +      + V+        PED +VE   S T    +R    
Sbjct: 567 IQLNHSGKYLCTVQTTLESLSAVADIIVRGPP---GPPEDVKVEDISSTTSQLSWRPGPD 623

Query: 333 SDPSLKLSIVWLRGSEPIDFE---SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
           ++  +++  +  R    + ++   + P  +    Y+ TV   S     ++   A   +  
Sbjct: 624 NNSPIQIFTIQTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGI 683

Query: 390 IEAQA-----TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ--- 441
            E             VP+ AP N          + V++W  +  +   G   GY V    
Sbjct: 684 GEPSKPSELLRTKASVPVVAPININGGGG-SRSELVITWESIPEELQNGEGFGYIVMFRP 742

Query: 442 ----TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
               TWT++    +     V + ES        +P S    +V  +N    G  S +   
Sbjct: 743 VGSTTWTKEKVASAESSRFVYRNES-------IIPLSPFEVKVGVYNDEGEGSLSTVTIV 795

Query: 498 VTPEGVP------GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKV 549
            + E  P       +VQS  A  +  S   + W    +  G ++GY++ Y     K + +
Sbjct: 796 YSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDSKESMI 852

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKN 604
           G +            T+  + GL+ +T Y   +  Y  AG G  S  +        P + 
Sbjct: 853 GKIR------VTGNITTKNITGLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQP 906

Query: 605 PDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           P N+  +  T + L ++W  +  +E+ +    Y+I +R++
Sbjct: 907 PANIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQN 945



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 137/380 (36%), Gaps = 44/380 (11%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ--GSYT 103
           L   ++ L C   G P P   W ++G  I+ +        G SL I     +DQ  G+Y 
Sbjct: 41  LSKSEIILNCAANGHPSPHYRWKQNGTDIDFTVSYHYRLEGGSLAISS-PHTDQVIGTYQ 99

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPEI----- 157
           C  +N +G   S    L       F T     ++  E + V   C     P P       
Sbjct: 100 CLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCG----PPPHFGDLSY 155

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY---------- 205
            W  N  P+     N RR V      + I  +  SD GNY C  TN              
Sbjct: 156 AWTFNDNPLYVQEDN-RRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPPTPL 214

Query: 206 ------VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL 259
                 V  +    +    PE  +A KD       +V L C   G P P+++W       
Sbjct: 215 VQRTDGVMGEYEPKIEVRFPETIQAAKD------SSVKLECFALGNPVPDISWRRWDGSP 268

Query: 260 TGGRYTILET-GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYE 318
             G+    +T   L+I +    D G Y C A N  G     G L          + ++  
Sbjct: 269 LPGKVKYSKTQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPPEWEQKIQNTY 328

Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQ 378
           +    S  + C A   P+   +  WL+  E ++ E     +Q  + +L +T  +  DSG 
Sbjct: 329 LSIYDSLLWECKASGKPNPWYT--WLKNGERLNPEER---IQIENGTLIITMLNVSDSGV 383

Query: 379 YTCRAQTELDFIEAQATLTV 398
           Y C A+ +   I A A L V
Sbjct: 384 YQCAAENKYQIIYANAELRV 403



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 90/248 (36%), Gaps = 30/248 (12%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L+ P FT EP    F     +  +   C A+G P P   W  NG  I        R  G
Sbjct: 22  LLSRPVFTQEPHDVIFPLDLSKSEIILNCAANGHPSPHYRWKQNGTDIDFTVSYHYRLEG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            +            G Y C ATN LG +         A+  +     +   +V +G+ VV
Sbjct: 82  GSLAISSPHTDQVIGTYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        W  N   L       R+   ETG+L I  V  +D G YTCF
Sbjct: 142 LLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCF 197

Query: 289 ARNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSL 337
             NK    + QG  +  V+    +  +         PE  +     S    C A+ +P  
Sbjct: 198 ITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVP 257

Query: 338 KLSIVWLR 345
            +S  W R
Sbjct: 258 DIS--WRR 263



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 85/190 (44%), Gaps = 14/190 (7%)

Query: 409 TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
           T +Q   A +  VSWN ++     G   GY+V  WT+   E  I ++ V  G  TT  + 
Sbjct: 809 TSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVT-GNITTKNIT 867

Query: 469 KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VK 526
                +  FA V A+N A  GP S  ++  T +  P    +  A  L +S   L W  VK
Sbjct: 868 GLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLTNSKLCLNWEHVK 927

Query: 527 PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGY 585
             +    ++GYKI Y+  + +K         +I +   TSA+L  L P    Y I +   
Sbjct: 928 TMENESEVLGYKILYRQNRQSKT--------HILETNNTSAEL--LVPFEEDYLIEIRTV 977

Query: 586 TKAGDGAESK 595
           +  GDG+ S+
Sbjct: 978 SDGGDGSSSE 987


>gi|332815945|ref|XP_003309633.1| PREDICTED: contactin-6 [Pan troglodytes]
          Length = 1019

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 182/715 (25%), Positives = 303/715 (42%), Gaps = 76/715 (10%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    + S+      L I + +  D+G Y 
Sbjct: 230 AAKDSSVKLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQ--AILEIPNFQQEDEGFYE 287

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C  SN  G   +    L   A P +  + +    +  + + +ECKASG P P   W+ NG
Sbjct: 288 CIASNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDNLLWECKASGKPNPWYTWLKNG 346

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++   P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 347 ERLN---PEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSK 403

Query: 224 AP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
           +P  K  +   G  +V+ C+  G P+  ++W    + L    R  +LE G LKI ++  +
Sbjct: 404 SPVKKKSFVQVGGDIVIGCKPNGFPRAAISWKRGTETLRQSKRVFLLEDGSLKIYNITRS 463

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ GTA+ +GSL VKE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 464 DAGSYTCIATNQFGTAKNTGSLIVKERTVITVPPSKMDVTVGESIVLPCQVSHDPSIEVV 523

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            VW    + ID +       R    +   L +       SG+Y C  QT L+ + A A +
Sbjct: 524 FVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADI 583

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW    P +     + + +QT T          ++
Sbjct: 584 IVRGPPGPPEDVQ-VEDISSTTSQLSWR-AGPDN-NSPIQIFTIQTRTPFSVGWQAVATV 640

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA 512
            E++   G++    V    P  +   RV+A N    G PSE    +  +     V  +  
Sbjct: 641 PEIL--NGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNI 698

Query: 513 IPLGS--SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
              G   S   + W  +  E  NG   GY I ++ V  T      E++  + + +    +
Sbjct: 699 HGGGGSRSELVITWESIPEELQNGEGFGYIIMFRPVGSTTWSK--EKVSSV-ESSRFVYR 755

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS-----TPNNLVISWT 623
              + P + + + +  Y   G+G+ S        ++   +  RG+     + + + +SW 
Sbjct: 756 NESIIPLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSLQSFSASEMEVSWN 815

Query: 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWT 683
           A+                       AWN       R +  VL        YE   V  WT
Sbjct: 816 AI-----------------------AWN-------RNTGRVLG-------YE---VLYWT 835

Query: 684 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           +   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S  ++  T
Sbjct: 836 DDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGTGPSSPPVNVTT 889



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 163/660 (24%), Positives = 258/660 (39%), Gaps = 87/660 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC ++N   EA+      SV   P   V+                
Sbjct: 171 NLYIAKVEPSDVGNYTCFITNK--EAQR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 223

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ +V  EC A G P P+I W   +G P+   P   +       + I N ++
Sbjct: 224 FPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPL---PGKVKYSKSQAILEIPNFQQ 280

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A+N  G       + +    PE  +  ++ Y      ++  C+  G P P 
Sbjct: 281 EDEGFYECIASNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDNLLWECKASGKPNPW 339

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L       +E G L IT +  +DSG Y C A NK      +  L V     
Sbjct: 340 YTWLKNGERLNPEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAP 399

Query: 309 HITDQPEDYE--VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P   +  V+ G      C     P  + +I W RG+E +      R     D SL
Sbjct: 400 DFSKSPVKKKSFVQVGGDIVIGCKPNGFP--RAAISWKRGTETL--RQSKRVFLLEDGSL 455

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV------ 420
            +   +  D+G YTC A  +    +   +L V+         T+I V  +K  V      
Sbjct: 456 KIYNITRSDAGSYTCIATNQFGTAKNTGSLIVK-------ERTVITVPPSKMDVTVGESI 508

Query: 421 -----VSWNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKF 470
                VS +P         F G  +         E+ G  S+ +L++   +       K+
Sbjct: 509 VLPCQVSHDPSIEVVFVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQ--LHHSGKY 566

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
           +   +     L+            ++ +   G PG  + ++   + S+   L W      
Sbjct: 567 LCTVQTTLESLS-----------AVADIIVRGPPGPPEDVQVEDISSTTSQLSWRAGPDN 615

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           N  +  + I  Q+     VG   +  +P I +  T +A + GL P  +Y   +      G
Sbjct: 616 NSPIQIFTI--QTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIG 673

Query: 590 DG--AESKYLFY----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  +E   L      VP   P N+ G G + + LVI+W ++PE   N   F Y I +R 
Sbjct: 674 IGEPSEPSELLRTKASVPVVAPVNIHGGGGSRSELVITWESIPEELQNGEGFGYIIMFRP 733

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
             +   W+++ V     S  V  N+      P+E+KV       +GEGS+  + IV  GE
Sbjct: 734 VGS-TTWSKEKVSSVESSRFVYRNESIIPLSPFEVKV--GVYNNEGEGSLSTVTIVYSGE 790



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 153/642 (23%), Positives = 249/642 (38%), Gaps = 87/642 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +NP +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 330 CKASGKPNPWYTWLKNGERLNPEERIQIEN--GTLIITMLNVSDSGVYQCAAENKY-QII 386

Query: 115 SYSIDLSVLA-APYFTVEP----EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
             + +L VLA AP F+  P     F+    +  +   CK +G P   I W    + + Q+
Sbjct: 387 YANAELRVLASAPDFSKSPVKKKSFVQVGGD--IVIGCKPNGFPRAAISWKRGTETLRQS 444

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
                 + G   + I N+ +SD G+Y C ATN  G   K+    ++     IT  P    
Sbjct: 445 KRVFLLEDG--SLKIYNITRSDAGSYTCIATNQFGTA-KNTGSLIVKERTVITVPPSKMD 501

Query: 230 TVDGKTVVLTCRVFGAPKPEVN--WIHN-----------QKELTGGRYTILETGDLKITD 276
              G+++VL C+V   P  EV   W  N             E  GG       GDL I +
Sbjct: 502 VTVGESIVLPCQVSHDPSIEVVFVWFFNGDVIDLKKGVAHFERIGGE----SVGDLMIRN 557

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSD 334
           +    SG+Y C  +  L +      + V+        PED +VE   S T + +  A  D
Sbjct: 558 IQLHHSGKYLCTVQTTLESLSAVADIIVRGPP---GPPEDVQVEDISSTTSQLSWRAGPD 614

Query: 335 PSLKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            +  + I  ++   P         + P  +    Y+ TV   S     ++   A   +  
Sbjct: 615 NNSPIQIFTIQTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGI 674

Query: 390 IEAQ-----ATLTVQVPLEAPSNFTLIQVIDAKKA--VVSWNPVSPQSLRGHFRGYKVQ- 441
            E             VP+ AP N   I      ++  V++W  +  +   G   GY +  
Sbjct: 675 GEPSEPSELLRTKASVPVVAPVN---IHGGGGSRSELVITWESIPEELQNGEGFGYIIMF 731

Query: 442 ------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
                 TW+++          V + ES        +P S    +V  +N    G  S + 
Sbjct: 732 RPVGSTTWSKEKVSSVESSRFVYRNES-------IIPLSPFEVKVGVYNNEGEGSLSTVT 784

Query: 496 SFVTPEGVP-----GT-VQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGT 547
              + E  P     GT +QS  A  +  S   + W    +  G ++GY++ Y     K +
Sbjct: 785 IVYSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDSKES 841

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PF 602
            +G +      +S   TT   + GL+ +T Y   +  Y  AG G  S  +        P 
Sbjct: 842 MIGKI-----RVSGNVTTK-NITGLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPS 895

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           + P N+  +  T + L ++W  +  +E+ +    Y+I +R++
Sbjct: 896 QPPANIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQN 936



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 136/380 (35%), Gaps = 44/380 (11%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK--HVEFSDQGSYT 103
           L   +V L C   G P P+  W ++G  I+ +        G SL I   H +  D G Y 
Sbjct: 32  LSKSEVVLNCAANGYPSPRYRWKQNGTDIDFTMSYHYRLDGGSLAINSPHTD-QDIGMYQ 90

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPEI----- 157
           C  +N +G   S    L       F T     ++  E + V   C     P P       
Sbjct: 91  CLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCG----PPPHFGDLSY 146

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY---------- 205
            W  N  P+     N RR V      + I  +  SD GNY C  TN              
Sbjct: 147 AWTFNDNPLYVQEDN-RRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPPTPL 205

Query: 206 ------VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKE 258
                 V  +    +    PE  +A KD       +V L C   G P P+++W   +   
Sbjct: 206 VQRTDGVMGEYEPKIEVRFPETIQAAKD------SSVKLECFALGNPVPDISWRRLDGSP 259

Query: 259 LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYE 318
           L G          L+I +    D G Y C A N  G     G L          + ++  
Sbjct: 260 LPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPPEWEQKIQNTY 319

Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQ 378
           +    +  + C A   P+   +  WL+  E ++ E     +Q  + +L +T  +  DSG 
Sbjct: 320 LSIYDNLLWECKASGKPNPWYT--WLKNGERLNPEER---IQIENGTLIITMLNVSDSGV 374

Query: 379 YTCRAQTELDFIEAQATLTV 398
           Y C A+ +   I A A L V
Sbjct: 375 YQCAAENKYQIIYANAELRV 394



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 107/291 (36%), Gaps = 32/291 (10%)

Query: 117 SIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           S+   +L+ P FT EP    F     +  V   C A+G P P   W  NG  I       
Sbjct: 8   SLGDGLLSRPIFTQEPHDVIFPLDLSKSEVVLNCAANGYPSPRYRWKQNGTDIDFTMSYH 67

Query: 174 RRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-D 232
            R  G +          D G Y C ATN LG +         A+  +     +   +V +
Sbjct: 68  YRLDGGSLAINSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVRE 127

Query: 233 GKTVVLTCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSG 283
           G+ VVL C     P P        W  N   L       R+   ETG+L I  V  +D G
Sbjct: 128 GQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVG 183

Query: 284 EYTCFARNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAV 332
            YTCF  NK    + QG  +  V+    +  +         PE  +     S    C A+
Sbjct: 184 NYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFAL 243

Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            +P   +S   L GS       + ++ +S    L +    + D G Y C A
Sbjct: 244 GNPVPDISWRRLDGSP---LPGKVKYSKSQAI-LEIPNFQQEDEGFYECIA 290



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 14/190 (7%)

Query: 409 TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
           T +Q   A +  VSWN ++     G   GY+V  WT+   E  I ++ V+ G  TT  + 
Sbjct: 800 TSLQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVS-GNVTTKNIT 858

Query: 469 KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VK 526
                +  FA V A+N A  GP S  ++  T +  P    +  A  L +S   L W  VK
Sbjct: 859 GLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLTNSKLCLNWEHVK 918

Query: 527 PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGY 585
             +    ++GYKI Y+  + +K         +I +   TSA+L  L P    Y I +   
Sbjct: 919 TMENESEVLGYKILYRQNRQSKT--------HILETNNTSAEL--LVPFEEDYLIEIRTV 968

Query: 586 TKAGDGAESK 595
           +  GDG+ S+
Sbjct: 969 SDGGDGSSSE 978


>gi|109035955|ref|XP_001097680.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
           [Macaca mulatta]
          Length = 1199

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 180/713 (25%), Positives = 293/713 (41%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 243 LKGETLLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYGKTLKIENVSYQDKGNYRCT 301

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG P
Sbjct: 302 ASNFLGTA-THDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 360

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           I   P      V P  I+  NL+ + T  Y C A+N  G +     V+V+   P I    
Sbjct: 361 IDNHP-FAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILASANVDVVDVRPLIQTKD 419

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            + Y TV G +  L C  F +P+  V+W  +   K L G RY + + G L+I      D+
Sbjct: 420 GENYATVVGYSAFLHCEFFASPEAVVSWQKVEEAKPLEGRRYHVYDNGTLQINRTTEEDA 479

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L 
Sbjct: 480 GSYSCWVENAIGKTAVTANLDIRNATQLRVSPKNPRIPKLHMLELHCESKCDLHLKHSLK 539

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y C A T LD       +TV 
Sbjct: 540 LSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVL 599

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   +SW   +      +   Y V+    K+  G   EL   +
Sbjct: 600 DVPDPPENLHLSERQN-RSVRLSWE--AGDDHNSNISEYIVEFEGNKEDPGRWEELTRVQ 656

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 657 GKKTTV-ILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 715

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 716 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 766

Query: 576 T--KYRIHLAGYTKAGDG-AESKYLFYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G A      Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 767 VYAPYDVKVQAINQLGSGPAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKD 826

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ V++        
Sbjct: 827 RVHGRLKGYQINW--------WKTKSLLDGRT-----------HPKEVNVLRF------- 860

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 861 ---------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTPEG 904



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 142/648 (21%), Positives = 257/648 (39%), Gaps = 71/648 (10%)

Query: 54  FCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113
           +C F   P  +TI  K  +P+              L +  ++ ++  S + E+ +     
Sbjct: 176 YCCFAAFPRLRTIVQK--MPMK-------------LTVNSLKHANDSSSSTEIGSKANSI 220

Query: 114 KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           K     L  L  P  +     I   + ET+  EC A GLP P++ W   G  + +     
Sbjct: 221 KQRKPKL--LLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKG---- 274

Query: 174 RRKVGPN---RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
            R+   N    + IEN+   D GNY C A+N LG    D +V ++   P  T+ P+    
Sbjct: 275 -RETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHV-IVEEPPRWTKKPQSAVY 332

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCF 288
             G   +L C   G P+P + W  N   +    +   ++   ++  T++    +  Y C 
Sbjct: 333 STGSNGILLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTAVYQCE 392

Query: 289 ARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           A N  GT   S ++ V +   +  T   E+Y    G SA   C   + P   +S  W + 
Sbjct: 393 ASNVHGTILASANVDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS--WQKV 450

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE--- 403
            E    E   R+   ++ +L + +++E D+G Y+C  +  +      A L ++   +   
Sbjct: 451 EEAKPLEGR-RYHVYDNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNATQLRV 509

Query: 404 APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG------SIRELIV 457
           +P N  +      K  ++  +  S   L  H +     +W+ KDGE           +I+
Sbjct: 510 SPKNPRI-----PKLHMLELHCESKCDL--HLKHSLKLSWS-KDGEAFEINGTEDGRIII 561

Query: 458 NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS 517
           +    T + V          + + A + A +      I+ VT   VP   ++L      +
Sbjct: 562 DGANLTISNVTLEDQGIYCCSALTALDSAAD------ITQVTVLDVPDPPENLHLSERQN 615

Query: 518 SAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPST 576
            +  L W   +  N  +  Y ++++   G K  P   E L  +    TT   +  L P  
Sbjct: 616 RSVRLSWEAGDDHNSNISEYIVEFE---GNKEDPGRWEELTRVQGKKTTV--ILPLAPFV 670

Query: 577 KYRIHLAGYTKAGDGAESKYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEH 630
           +Y+  +    + G    S+   +       P +NP N+  + S P  ++I W  +  +E 
Sbjct: 671 RYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQ 730

Query: 631 NAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           N P  +YR+ W+       W ++ V +     L +     + PY++KV
Sbjct: 731 NGPGLEYRVTWKPQGAPVEWEEETVTN---HTLRVMTPAVYAPYDVKV 775



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 132/577 (22%), Positives = 228/577 (39%), Gaps = 55/577 (9%)

Query: 53  LFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
           L C F  +P     W K  +  P+    R    + G +L I      D GSY+C V N +
Sbjct: 433 LHCEFFASPEAVVSWQKVEEAKPLE-GRRYHVYDNG-TLQINRTTEEDAGSYSCWVENAI 490

Query: 111 GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--------WVHN 162
           G+  + + +L +  A    V P+     +   +   C++      ++H        W  +
Sbjct: 491 GKT-AVTANLDIRNATQLRVSPKNPRIPKLHMLELHCESKC----DLHLKHSLKLSWSKD 545

Query: 163 GKPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           G+        + R  +    +TI N+   D G Y C+A  +L        V VL    ++
Sbjct: 546 GEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVL----DV 601

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG-----GRYTILETGDLKITD 276
            + P++ +  + +   +            N      E  G     GR+  L     K T 
Sbjct: 602 PDPPENLHLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEDPGRWEELTRVQGKKTT 661

Query: 277 VAFADSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSAT---- 326
           V    +     ++   A N++G +Q S      E         P++  V+A Q       
Sbjct: 662 VILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIK 721

Query: 327 ---FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
               +    + P L+  + W     P+++E E       +++L V   +         +A
Sbjct: 722 WEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TVTNHTLRVMTPAVYAPYDVKVQA 777

Query: 384 QTELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
             +L    A  ++T+    + P    +I    VI++    V+W+ +    + G  +GY++
Sbjct: 778 INQLGSGPAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQI 837

Query: 441 QTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
             W  K   DG    +E+ V +  G+  +  V      S+    VLA+N    GP SE  
Sbjct: 838 NWWKTKSLLDGRTHPKEVNVLRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPY 897

Query: 496 SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE 554
            F TPEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T ++G L +
Sbjct: 898 IFQTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGNLTGYLLQYQIINDTYEIGELND 957

Query: 555 RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
               I+ P+  S  L+ L  +TKY+ +L   T  G G
Sbjct: 958 I--NITTPSKPSWHLSNLNATTKYKFYLRACTSRGCG 992



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 167/415 (40%), Gaps = 62/415 (14%)

Query: 67  WSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSNGVGEAKSYSIDLSVL 123
           W+KDG P + +D   I+  N G   I      S  QG Y C  SN +G A S  I+  V 
Sbjct: 43  WTKDGNPFHFTDHRIITSNNSGTFRIPNEGHISHFQGKYRCFASNKLGIAMSEEIEFIVP 102

Query: 124 AAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPN 180
           + P F  E  + +   E + +   C    GLP   I+W++   + I Q       + G  
Sbjct: 103 SVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEHIEQDERVYMSQKG-- 160

Query: 181 RITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA---------------- 218
            +   N+ + D+ N Y C A        +  +   + VN L HA                
Sbjct: 161 DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHANDSSSSTEIGSKANSI 220

Query: 219 ----PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE 268
               P++   P +  +      + G+T++L C   G P P+V+W     +L  GR T   
Sbjct: 221 KQRKPKLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKEN 280

Query: 269 TGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
            G  LKI +V++ D G Y C A N LGTA     + V+E    T +P+      G +   
Sbjct: 281 YGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKKPQSAVYSTGSNGIL 340

Query: 328 RCNAVSDPSLKLSIVWLRGSEPID---------FESEPRF--VQSNDYSLTVTKSSELDS 376
            C A  +P  + +I W     PID         F  E  F  +Q N  ++   ++S +  
Sbjct: 341 LCEAEGEP--QPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHG 398

Query: 377 GQYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDAKKAVVSWNPV 426
              T  A   +D ++ +  +  +       +   S F   +   + +AVVSW  V
Sbjct: 399 ---TILASANVDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV 450


>gi|193785234|dbj|BAG54387.1| unnamed protein product [Homo sapiens]
          Length = 1113

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 177/713 (24%), Positives = 297/713 (41%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 253 LKGEILLLECFAEGLPTPQVDWNKIGGDL-PKGREAKENYGKTLKIENVSYQDKGNYRCT 311

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG P
Sbjct: 312 ASNFLGTA-THDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 370

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +   P      V P  I+  NL+ + T  Y C A+N  G +  +  ++V+   P I    
Sbjct: 371 VDNHP-FAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQTKD 429

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            + Y TV G +  L C  F +P+  V+W  +   K L G RY I E G L+I      D+
Sbjct: 430 GENYATVVGYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDA 489

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L 
Sbjct: 490 GSYSCWVENAIGKTAVTANLDIRNATKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLK 549

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y C A T LD       +TV 
Sbjct: 550 LSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVL 609

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +  +   +   Y V+    K+  G   EL   +
Sbjct: 610 DVPDPPENLHLSERQN-RSVRLTWEAGADHN--SNISEYIVEFEGNKEEPGRWEELTRVQ 666

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 667 GKKTTV-ILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 725

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 726 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPVE--------WEEETVTNHTLRVMTPA 776

Query: 576 T--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G + + +  Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 777 VYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKD 836

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ +++        
Sbjct: 837 RVHGRLKGYQINW--------WKTKSLLDGRT-----------HPKEVNILRF------- 870

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 871 ---------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTPEG 914



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 126/570 (22%), Positives = 223/570 (39%), Gaps = 60/570 (10%)

Query: 135 INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSD 191
           I   + E +  EC A GLP P++ W   G  + +      R+   N    + IEN+   D
Sbjct: 250 ITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKG-----REAKENYGKTLKIENVSYQD 304

Query: 192 TGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVN 251
            GNY C A+N LG    D +V ++   P  T+ P+      G   +L C   G P+P + 
Sbjct: 305 KGNYRCTASNFLGTATHDFHV-IVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIK 363

Query: 252 WIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH 309
           W  N   +    +   ++   ++  T++    +  Y C A N  GT   + ++ V +   
Sbjct: 364 WRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRP 423

Query: 310 I--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
           +  T   E+Y    G SA   C   + P   +S  W +  E    E     +  N  +L 
Sbjct: 424 LIQTKDGENYATVVGYSAFLHCEFFASPEAVVS--WQKVEEVKPLEGRRYHIYENG-TLQ 480

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVS 427
           + +++E D+G Y+C  +  +      A L ++               +A K  VS  P +
Sbjct: 481 INRTTEEDAGSYSCWVENAIGKTAVTANLDIR---------------NATKLRVS--PKN 523

Query: 428 PQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGES---TTTEVDKFVPASKNFA---RVL 481
           P+  + H      ++  +   + S++      GE+     TE  + +    N       L
Sbjct: 524 PRIPKLHMLELHCESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANLTISNVTL 583

Query: 482 AFNGAYNGPP------SEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
              G Y          +  I+ VT   VP   ++L      + +  L W      N  + 
Sbjct: 584 EDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGADHNSNIS 643

Query: 536 GYKIKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y ++++   G K  P   E L  +    TT   +  L P  +Y+  +    + G    S
Sbjct: 644 EYIVEFE---GNKEEPGRWEELTRVQGKKTTV--ILPLAPFVRYQFRVIAVNEVGRSQPS 698

Query: 595 KYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
           +   +       P +NP N+  + S P  ++I W  +  +E N P  +YR+ W+      
Sbjct: 699 QPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPV 758

Query: 649 AWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            W ++ V +     L +     + PY++KV
Sbjct: 759 EWEEETVTN---HTLRVMTPAVYAPYDVKV 785



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 128/539 (23%), Positives = 223/539 (41%), Gaps = 49/539 (9%)

Query: 88   SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
            +L I      D GSY+C V N +G+  + + +L +  A    V P+     +   +   C
Sbjct: 478  TLQINRTTEEDAGSYSCWVENAIGKT-AVTANLDIRNATKLRVSPKNPRIPKLHMLELHC 536

Query: 148  KA---SGLPEP-EIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202
            ++   S L    ++ W  +G+        + R  +    +TI N+   D G Y C+A  +
Sbjct: 537  ESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTA 596

Query: 203  LGYVYKDVYVNVLAHAPEITEAPKDEYTVD--GKTVVLTCRVFGAPKPE------VNWIH 254
            L        V VL    ++ + P++ +  +   ++V LT    GA          V +  
Sbjct: 597  LDSAADITQVTVL----DVPDPPENLHLSERQNRSVRLTWEA-GADHNSNISEYIVEFEG 651

Query: 255  NQKELTGGRYTILETGDLKITDVAFADSG----EYTCFARNKLGTAQGSGSLTVKEHTHI 310
            N++E   GR+  L     K T V    +     ++   A N++G +Q S      E    
Sbjct: 652  NKEE--PGRWEELTRVQGKKTTVILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPA 709

Query: 311  T--DQPEDYEVEAGQSAT-------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS 361
                 P++  V+A Q           +    + P L+  + W     P+++E E      
Sbjct: 710  APDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TV 765

Query: 362  NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKK 418
             +++L V   +         +A  +L       ++T+    + P    +I    VI++  
Sbjct: 766  TNHTLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTL 825

Query: 419  AVVSWNPVSPQSLRGHFRGYKVQTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPA 473
              V+W+ V    + G  +GY++  W  K   DG    +E+ + +  G+  +  V      
Sbjct: 826  VKVTWSTVPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAF 885

Query: 474  SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV 533
            S+    VLA+N    GP SE   F TPEGVP     L+ I +      L W  P++ NG 
Sbjct: 886  SEFHLTVLAYNSKGAGPESEPYIFQTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGN 945

Query: 534  LMGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            L GY ++YQ +  T ++G L +    I+ P+  S  L+ L  +TKY+ +L   T  G G
Sbjct: 946  LTGYLLQYQIINDTYEIGELNDI--NITTPSKPSWHLSNLNATTKYKFYLRACTSQGCG 1002



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 103/414 (24%), Positives = 169/414 (40%), Gaps = 46/414 (11%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P   W+KDG P   +D   I   N G   I      S  QG Y C  SN
Sbjct: 54  QIECEAKGNPEPTFSWTKDGNPFYFTDHRIIPSNNSGTFRIPNEGHISHFQGKYRCFASN 113

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKP 165
            +G A S  I+  V + P F  E  + +   E + +   C    GLP   I+W++   + 
Sbjct: 114 KLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEH 173

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-NSLGYVYKDVYVNVLAHA----- 218
           I Q       + G   +   N+ + D+ N Y C A    L  + + + + +  ++     
Sbjct: 174 IEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNSIK 231

Query: 219 ---PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILET 269
              P++   P +  +      + G+ ++L C   G P P+V+W     +L  GR      
Sbjct: 232 QRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKGREAKENY 291

Query: 270 GD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           G  LKI +V++ D G Y C A N LGTA     + V+E    T +P+      G +    
Sbjct: 292 GKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKKPQSAVYSTGSNGILL 351

Query: 329 CNAVSDPSLKLSIVWLRGSEPID---------FESEPRF--VQSNDYSLTVTKSSELDSG 377
           C A  +P  + +I W     P+D         F  E  F  +Q N  ++   ++S +   
Sbjct: 352 CEAEGEP--QPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHG- 408

Query: 378 QYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDAKKAVVSWNPV 426
             T  A   +D ++ +  +  +       +   S F   +   + +AVVSW  V
Sbjct: 409 --TILANANIDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV 460



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 111/293 (37%), Gaps = 31/293 (10%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKP--ISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +E    EC+A G PEP   W  +G P   +     P    G  RI  E       G Y C
Sbjct: 50  DEYFQIECEAKGNPEPTFSWTKDGNPFYFTDHRIIPSNNSGTFRIPNEGHISHFQGKYRC 109

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN 255
            A+N LG    +    ++   P+  +   D   V +G  +VL C    G P   + W++ 
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNI 169

Query: 256 QKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTH 309
           + E      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV     
Sbjct: 170 ELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNS 229

Query: 310 ITDQ-------PEDYEVEA------GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           I  +       P +   E+      G+     C A   P+ ++    + G  P   E++ 
Sbjct: 230 IKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKGREAKE 289

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFT 409
            + +    +L +   S  D G Y C A   L      AT    V +E P  +T
Sbjct: 290 NYGK----TLKIENVSYQDKGNYRCTASNFL----GTATHDFHVIVEEPPRWT 334


>gi|432092485|gb|ELK25100.1| Contactin-3 [Myotis davidii]
          Length = 1033

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 178/387 (45%), Gaps = 15/387 (3%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V L C   G P+P+  W + DG P     +I+   +G  L I   E  D GSY 
Sbjct: 312 AAKGSTVRLECFALGNPVPRITWRRSDGRPF--PRKINVRKFGGVLEIPGFEQEDAGSYE 369

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G   +    L+  A P++      + AA EE++ ++C+A G P+P   W+ NG
Sbjct: 370 CLAENSRGRNVARG-RLTYYAKPHWVQLIGDVEAAVEESLRWDCRAGGKPKPSYRWLRNG 428

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++      R ++    ++I NL  +D G + C A N  G  Y    + VLA AP+ + 
Sbjct: 429 EALAL---EERIQLENGALSIVNLSVADAGMFQCVAENKHGLAYSSAELRVLASAPDFSA 485

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
            P  +      G  V L CR   AP+   +W   +  +   GR + L+ G L I +V  A
Sbjct: 486 TPMRKLVRAQVGSVVGLDCRPRAAPRAVCSWKRGEVTVREDGRISFLKEGGLSIANVTKA 545

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTCFA N+ GTA  S  L V + T IT  P + +V  G+S    C    DP L ++
Sbjct: 546 DAGTYTCFAENQFGTANDSTRLVVTDPTRITLAPSNMDVSVGESVVLPCQVRHDPLLDVA 605

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +   ++    S+   L +        G+Y C  Q+ +D + + A L
Sbjct: 606 FTWYFNGALADFQKDGSHLEKVGGSSSGDLMIRNIQLKHGGKYVCVVQSAVDSVSSAADL 665

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW 423
            V+     P N  + ++ D   A VSW
Sbjct: 666 VVRGSPGPPGNVQVEEITDT-TAQVSW 691



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 154/626 (24%), Positives = 231/626 (36%), Gaps = 94/626 (15%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L +  VE SD G+YTC V++ V  A+       ++           P   V+ PE + AA
Sbjct: 254 LYVAKVEPSDVGNYTCVVTSVVTAARVLGSPTPLMLRADGVMGEYEPKIEVQFPETLPAA 313

Query: 139 EEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPR----RKVGPNRITIENLRKSDTGN 194
           +  TV  EC A G P P I W       S   P PR    RK G   + I    + D G+
Sbjct: 314 KGSTVRLECFALGNPVPRITWRR-----SDGRPFPRKINVRKFG-GVLEIPGFEQEDAGS 367

Query: 195 YGCNATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNW 252
           Y C A NS G   ++V    L +   P   +   D      +++   CR  G PKP   W
Sbjct: 368 YECLAENSRG---RNVARGRLTYYAKPHWVQLIGDVEAAVEESLRWDCRAGGKPKPSYRW 424

Query: 253 IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---H 309
           + N + L       LE G L I +++ AD+G + C A NK G A  S  L V        
Sbjct: 425 LRNGEALALEERIQLENGALSIVNLSVADAGMFQCVAENKHGLAYSSAELRVLASAPDFS 484

Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
            T   +    + G      C   + P    S  W RG   +  +    F++     L++ 
Sbjct: 485 ATPMRKLVRAQVGSVVGLDCRPRAAPRAVCS--WKRGEVTVREDGRISFLKEG--GLSIA 540

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTL-IQVIDAKKAVVSWNP 425
             ++ D+G YTC A+ +         L V  P     APSN  + +         V  +P
Sbjct: 541 NVTKADAGTYTCFAENQFGTANDSTRLVVTDPTRITLAPSNMDVSVGESVVLPCQVRHDP 600

Query: 426 VSPQSLRGHFRG-----YKVQTWTEKDGEGS-----IRELIVNKGESTTTEVDKFVPASK 475
           +   +   +F G      K  +  EK G  S     IR + +  G      V   V +  
Sbjct: 601 LLDVAFTWYFNGALADFQKDGSHLEKVGGSSSGDLMIRNIQLKHGGKYVCVVQSAVDSVS 660

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
           + A ++       G P          G PG VQ  E   +  +   + W +    +  + 
Sbjct: 661 SAADLVV-----RGSP----------GPPGNVQVEE---ITDTTAQVSWTEGTDNHSPIT 702

Query: 536 GYKIKYQSVKGTKVGPLLER-LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y +  Q+     VG    R +P + D  T +A +  L P  +Y   +    + G G  S
Sbjct: 703 SYSV--QARTPFSVGWQAARTVPEVIDGNTHTATVVELNPWVEYEFRVVASNRLGGGEPS 760

Query: 595 KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
                +P + P                   +PE   N   F Y + +R       W Q  
Sbjct: 761 -----LPSEKP-------------------VPEELQNGEGFGYVVAFRPLGV-TTWIQTV 795

Query: 655 VLDWRQSELVLANQPT--FQPYEIKV 678
           V        V  N+    F PY++KV
Sbjct: 796 VTSPDAPRYVFRNESIVPFAPYQVKV 821



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 142/376 (37%), Gaps = 32/376 (8%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFSDQGSY 102
           V   +K+V   C   G P PQ  W  +G  IN + +   + N G  ++I      D GSY
Sbjct: 112 VGAEDKRVTFKCEARGNPSPQYRWQLNGSDINLAVESRYELNGGDLVVINPHRDRDSGSY 171

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEI 157
            C  +N +G   S    L       F T     ++  E + V   C   G P    E   
Sbjct: 172 QCFATNPLGTIVSREAKLQFAYLENFKTRMRSAVSVREGQGVVLLC---GPPPHSGELSY 228

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGC------NATNSLG----- 204
            W+ N  P S    + RR +      + +  +  SD GNY C       A   LG     
Sbjct: 229 AWIFNEYP-SFVEEDGRRFISQETGHLYVAKVEPSDVGNYTCVVTSVVTAARVLGSPTPL 287

Query: 205 YVYKDVYVNVLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGR 263
            +  D  +    + P+I  + P+      G TV L C   G P P + W  +       +
Sbjct: 288 MLRADGVMG--EYEPKIEVQFPETLPAAKGSTVRLECFALGNPVPRITWRRSDGRPFPRK 345

Query: 264 YTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAG 322
             + + G  L+I      D+G Y C A N  G     G LT     H      D E    
Sbjct: 346 INVRKFGGVLEIPGFEQEDAGSYECLAENSRGRNVARGRLTYYAKPHWVQLIGDVEAAVE 405

Query: 323 QSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCR 382
           +S  + C A   P  K S  WLR  E +  E     +Q  + +L++   S  D+G + C 
Sbjct: 406 ESLRWDCRAGGKP--KPSYRWLRNGEALALEER---IQLENGALSIVNLSVADAGMFQCV 460

Query: 383 AQTELDFIEAQATLTV 398
           A+ +     + A L V
Sbjct: 461 AENKHGLAYSSAELRV 476



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 122/302 (40%), Gaps = 36/302 (11%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP        AE++ VTF+C+A G P P+  W  NG  I+ A  +     G
Sbjct: 95  LLHGPVFVSEPSDSMVPVGAEDKRVTFKCEARGNPSPQYRWQLNGSDINLAVESRYELNG 154

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            + + I   R  D+G+Y C ATN LG +         A+        +   +V +G+ VV
Sbjct: 155 GDLVVINPHRDRDSGSYQCFATNPLGTIVSREAKLQFAYLENFKTRMRSAVSVREGQGVV 214

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        WI N+     E  G R+   ETG L +  V  +D G YTC 
Sbjct: 215 LLC----GPPPHSGELSYAWIFNEYPSFVEEDGRRFISQETGHLYVAKVEPSDVGNYTCV 270

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
             + +  A+  GS   L ++    + +         PE      G +    C A+ +P  
Sbjct: 271 VTSVVTAARVLGSPTPLMLRADGVMGEYEPKIEVQFPETLPAAKGSTVRLECFALGNPVP 330

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYS--LTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
           +  I W R     D    PR +    +   L +    + D+G Y C A+       A+  
Sbjct: 331 R--ITWRRS----DGRPFPRKINVRKFGGVLEIPGFEQEDAGSYECLAENSRGRNVARGR 384

Query: 396 LT 397
           LT
Sbjct: 385 LT 386



 Score = 46.2 bits (108), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 112/492 (22%), Positives = 181/492 (36%), Gaps = 72/492 (14%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
           RK   A     V L C     P     W +  V +    RIS    G  L I +V  +D 
Sbjct: 489 RKLVRAQVGSVVGLDCRPRAAPRAVCSWKRGEVTVREDGRISFLKEG-GLSIANVTKADA 547

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH- 158
           G+YTC   N  G A   S  L V      T+ P  ++ +  E+V   C+    P  ++  
Sbjct: 548 GTYTCFAENQFGTAND-STRLVVTDPTRITLAPSNMDVSVGESVVLPCQVRHDPLLDVAF 606

Query: 159 -WVHNGKPIS-QAPPNPRRKVGPNR---ITIENLRKSDTGNYGCNATNSLGYVYK--DVY 211
            W  NG     Q   +   KVG +    + I N++    G Y C   +++  V    D+ 
Sbjct: 607 TWYFNGALADFQKDGSHLEKVGGSSSGDLMIRNIQLKHGGKYVCVVQSAVDSVSSAADLV 666

Query: 212 VNVLAHAP------EITE--------------APKDEYTVDGKTVVLTCRVFGAPKPEVN 251
           V      P      EIT+              +P   Y+V  +T            PEV 
Sbjct: 667 VRGSPGPPGNVQVEEITDTTAQVSWTEGTDNHSPITSYSVQARTPFSVGWQAARTVPEV- 725

Query: 252 WIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT 311
                  + G  +T        + ++      E+   A N+LG           E +  +
Sbjct: 726 -------IDGNTHTA------TVVELNPWVEYEFRVVASNRLGGG---------EPSLPS 763

Query: 312 DQPEDYEVEAGQS----ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
           ++P   E++ G+       FR   V+         W++    +     PR+V  N+ S+ 
Sbjct: 764 EKPVPEELQNGEGFGYVVAFRPLGVT--------TWIQ--TVVTSPDAPRYVFRNE-SIV 812

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVS 427
                ++  G Y  + +     + A      + P  AP++      + + +  VSW+ + 
Sbjct: 813 PFAPYQVKVGVYNNKGEGPFSPV-ATVLSAEEEPTAAPAH-VWAHSLSSSEIEVSWSAIP 870

Query: 428 PQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
            +   GH  GY+V+ WT  + EGS R + V  GE T   +          A V A+N A 
Sbjct: 871 WKLSSGHLLGYEVRYWTSGE-EGSPRRVKVVAGE-TVARLHGLKSHLVYHAAVRAYNSAG 928

Query: 488 NGPPSEIISFVT 499
            GP S  ++  T
Sbjct: 929 AGPFSATVNATT 940


>gi|387762905|ref|NP_001248680.1| contactin 1 precursor [Macaca mulatta]
 gi|402885642|ref|XP_003906258.1| PREDICTED: contactin-1 isoform 1 [Papio anubis]
 gi|355564139|gb|EHH20639.1| Neural cell surface protein F3 [Macaca mulatta]
 gi|380787725|gb|AFE65738.1| contactin-1 isoform 1 precursor [Macaca mulatta]
          Length = 1018

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 186/728 (25%), Positives = 294/728 (40%), Gaps = 90/728 (12%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 241 PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 298

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 299 NIQLEDEGIYECEAENIRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 354

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 355 TGKPIPTIRWLKNGYAYHKG------ELRLYDVTFEN-----AGMYQCIAENTYGAIYAN 403

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 404 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 463

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 464 WEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENAT 523

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A SDP+L L+ VW      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 524 MQCAASSDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 583

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            AQT +D   A A L V+ P   P     I+ I A    ++W+  S          Y +Q
Sbjct: 584 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYTIQ 640

Query: 442 TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           T T    D + +  +  + +G          +P  +   RV+A N    G PS   + + 
Sbjct: 641 TKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNRIK 700

Query: 500 PEGVPGTVQSLEAIPLG--SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
            +G    V   +    G  +    + W  +  E   G   GY + ++   G +   +   
Sbjct: 701 TDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVT 760

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEG 610
            P   D      K   + PST +++ +  +   GDG  S           P + P  V  
Sbjct: 761 NP---DTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGV 817

Query: 611 RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT 670
           +  + + + + W  +  +E     ++ R +W  H+  EA N+  V              T
Sbjct: 818 KVLSSSEISVHWEHV--LEKIVESYQIR-YWAAHDKEEAANRVQV--------------T 860

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
            Q Y                            +  ++  +P ++ F  V A N A  GPP
Sbjct: 861 SQEY----------------------------SARLENLLPDTQYFIEVGACNSAGCGPP 892

Query: 731 SEIISFVT 738
           S+ I   T
Sbjct: 893 SDTIETFT 900



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 153/657 (23%), Positives = 244/657 (37%), Gaps = 85/657 (12%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 189 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVV 246

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  + A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 247 QFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 303

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N  G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 304 DEGIYECEAENIRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 362

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 363 RWLKN-----GYAY---HKGELRLYDVTFENAGMYQCIAENTYGAIYANAELKILALAPT 414

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   D SL 
Sbjct: 415 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 470

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC A+       +  TL +  P   + AP N  +    +A  +   S 
Sbjct: 471 INNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASS 530

Query: 424 NPVSPQSLRGHFRGYKVQ-----------TWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
           +P    +    F GY +               + +GE  IR   +      T      V 
Sbjct: 531 DPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVD 590

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
            S   A ++                    G PG    L    + +++  L W +    + 
Sbjct: 591 NSSASADLVV------------------RGPPGPPGGLRIEDIRATSVALTWSRGSDNHS 632

Query: 533 VLMGYKIKYQSV-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
            +  Y I+ +++     K  K  P       I +    +A+   L P  +Y   +     
Sbjct: 633 PISKYTIQTKTILSDDWKDAKTDPP------IIEGNMEAARAVDLIPWMEYEFRVVATNT 686

Query: 588 AGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            G G  S      K     P   P +V G G     L I+W  +    H   +F Y + +
Sbjct: 687 LGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAF 746

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
           +  + GE W +  V +      V  ++ T  P   +++KV     + DG  S+  +I
Sbjct: 747 KPFD-GEEWKKVTVTNPDTGRYVHKDE-TMSPSTAFQVKVKAFNNKGDGPYSLVAVI 801



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 140/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   ++  SDR S    G +L+I + +   D G Y C  S
Sbjct: 60  KVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 117

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 118 NSYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 171

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 172 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 228

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 229 LIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 288

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 289 STSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 348

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+       + E R      Y +T       ++G Y C A+ 
Sbjct: 349 YWPCVATGKPI--PTIRWLKNGYAY-HKGELRL-----YDVTFE-----NAGMYQCIAEN 395

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 396 TYGAIYANAELKI 408



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   +     +    VG N +   
Sbjct: 47  PINTIYPE---ESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTS-DRYSMVGGNLVINN 102

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+NS G V          +        + E  V +GK +VL C   +
Sbjct: 103 PDKQKDAGIYYCLASNSYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 162

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 163 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 222

Query: 299 SGSLT----VKEHT------HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                    + E T       I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 223 FSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV--PDIRWRKVLE 280

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 281 PMPSTAE---ISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 328



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+    ++V+ + +  V W  V    L      Y+++ W   D E +   + V   
Sbjct: 808 PSEAPTEVG-VKVLSSSEISVHWEHV----LEKIVESYQIRYWAAHDKEEAANRVQVTSQ 862

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GPPS+ I   T +  P     + +     S +
Sbjct: 863 E-YSARLENLLPDTQYFIEVGACNSAGCGPPSDTIETFTKKAPPSQPPRIISSIRSGSRY 921

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYK+ Y+
Sbjct: 922 IITWDHVVALSNESTVTGYKVLYR 945


>gi|114645304|ref|XP_001168046.1| PREDICTED: contactin-1 isoform 3 [Pan troglodytes]
          Length = 1007

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 185/730 (25%), Positives = 297/730 (40%), Gaps = 94/730 (12%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 230 PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 287

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 288 NIQLEDEGIYECEAENIRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 343

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 344 TGKPIPTIRWLKNGYAYHKG------ELRLYDVTFEN-----AGMYQCIAENTYGAIYAN 392

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 393 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 452

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 453 WEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENAT 512

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ VW      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 513 MQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 572

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            AQT +D   A A L V+ P   P     I+ I A    ++W+  S          Y +Q
Sbjct: 573 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYTIQ 629

Query: 442 TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           T T    D + +  +  + +G          +P  +   RV+A N    G PS   + + 
Sbjct: 630 TKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNRIK 689

Query: 500 PEGVPGTVQSLEAIPLG--SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
            +G    V   +    G  +    + W  +  E   G   GY + ++   G +   +   
Sbjct: 690 TDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT-- 747

Query: 556 LPYISDPTTTS--AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNV 608
              +++P T     K   + PST +++ +  +   GDG  S           P + P  V
Sbjct: 748 ---VTNPDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEV 804

Query: 609 EGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQ 668
             +  + + + + W  +  +E     ++ R +W  H+  EA N+  V             
Sbjct: 805 GAKVLSSSEISVHWEHV--LEKIVESYQIR-YWAAHDKEEAANRVQV------------- 848

Query: 669 PTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 728
            T Q Y                            +  ++  +P ++ F  V A N A  G
Sbjct: 849 -TSQEY----------------------------SARLENLLPDTQYFIEVGACNSAGCG 879

Query: 729 PPSEIISFVT 738
           PPS++I   T
Sbjct: 880 PPSDMIEAFT 889



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 154/657 (23%), Positives = 246/657 (37%), Gaps = 85/657 (12%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 178 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVV 235

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  + A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 236 QFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 292

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N  G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 293 DEGIYECEAENIRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 351

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 352 RWLKN-----GYAY---HKGELRLYDVTFENAGMYQCIAENTYGAIYANAELKILALAPT 403

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   D SL 
Sbjct: 404 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 459

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC A+       +  TL +  P   + AP N  +    +A  +   S+
Sbjct: 460 INNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASF 519

Query: 424 NPVSPQSLRGHFRGYKVQ-----------TWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
           +P    +    F GY +               + +GE  IR   +      T      V 
Sbjct: 520 DPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVD 579

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
            S   A ++                    G PG    L    + +++  L W +    + 
Sbjct: 580 NSSASADLVV------------------RGPPGPPGGLRIEDIRATSVALTWSRGSDNHS 621

Query: 533 VLMGYKIKYQSV-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
            +  Y I+ +++     K  K  P     P I +    +A+   L P  +Y   +     
Sbjct: 622 PISKYTIQTKTILSDDWKDAKTDP-----PII-EGNMEAARAVDLIPWMEYEFRVVATNT 675

Query: 588 AGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            G G  S      K     P   P +V G G     L I+W  +    H   +F Y + +
Sbjct: 676 LGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAF 735

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
           +  + GE W +  V +      V  ++ T  P   +++KV     + DG  S+  +I
Sbjct: 736 KPFD-GEEWKKVTVTNPDTGRYVHKDE-TMSPSTAFQVKVKAFNNKGDGPYSLVAVI 790



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 140/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   ++  SDR S    G +L+I + +   D G Y C  S
Sbjct: 49  KVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 106

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 107 NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 160

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 161 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 217

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 218 LIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 277

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 278 STSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 337

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+       + E R      Y +T       ++G Y C A+ 
Sbjct: 338 YWPCVATGKPI--PTIRWLKNGYAY-HKGELRL-----YDVTFE-----NAGMYQCIAEN 384

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 385 TYGAIYANAELKI 397



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   +     +    VG N +   
Sbjct: 36  PINTIYPE---ESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTS-DRYSMVGGNLVINN 91

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   +
Sbjct: 92  PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 151

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 152 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 211

Query: 299 SGSLT----VKEHT------HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                    + E T       I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 212 FSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV--PDIRWRKVLE 269

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 270 PMPSTAE---ISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 317



 Score = 40.8 bits (94), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+     +V+ + +  V W  V    L      Y+++ W   D E +   + V   
Sbjct: 797 PSEAPTEVGA-KVLSSSEISVHWEHV----LEKIVESYQIRYWAAHDKEEAANRVQVTSQ 851

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GPPS++I   T +  P     + +     S +
Sbjct: 852 E-YSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKAPPSQPPRIISSVRSGSRY 910

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYK+ Y+
Sbjct: 911 IITWDHVVALSNESTVTGYKVLYR 934


>gi|341903971|gb|EGT59906.1| hypothetical protein CAEBREN_16950 [Caenorhabditis brenneri]
          Length = 1325

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 194/801 (24%), Positives = 330/801 (41%), Gaps = 108/801 (13%)

Query: 8   EYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIW 67
           +YK GN+  L  I      S  +  P +QYV +   +AL+  + +L C F G P P+  W
Sbjct: 229 DYKFGNQFSLQ-ITNNKRRSLQQMPPTEQYVNQSSPIALQGNQHKLHCFFSGYPAPKPRW 287

Query: 68  SKDGVPINPSDRISQG----NYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVL 123
             +G  I+  D  + G    +YGK+L+  +V     G Y C  +      +++++   V 
Sbjct: 288 FHNGREIS-EDSDAAGFRFESYGKTLVF-NVTQDKAGKYDCRFATQNDIDRTFNV--VVE 343

Query: 124 AAPYFTV-EPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
           AAPY+ +  P   N +E E VTF+C   G P P++ +  NG  ++ A  + R  +   R+
Sbjct: 344 AAPYWPLGPPPNTNTSEGENVTFDCTTYGKPTPKVTFYKNGVELA-AQKDDRYLIQGTRL 402

Query: 183 TIENLRKS-----DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY--TVDGKT 235
           TI +++K      D   Y C + N  G+++ + Y+N+LA  P++   P  E    V GK 
Sbjct: 403 TIYDVKKGTYGKGDNAVYQCKSENKHGWLWTNFYLNLLAFKPQLLIDPGKEEVEAVAGKK 462

Query: 236 VVLTCRVFGAPKPEVNW----IHNQK--ELTGGRYTILETGDLKITDVAFADSGEYTCFA 289
           V L C+ F +P   V W    I   K  ++    Y +   G L  ++V  A+ GEY C  
Sbjct: 463 VTLECKFFASPNAAVKWEAPMISGSKGNQIPADPYGV---GRLVFSEVTSAEEGEYECVG 519

Query: 290 RNKLGTAQGSGSLTVKEHTHITDQPEDYEVE-AGQSATFRCNAVSDPSLKLSIVWLRGSE 348
            NK G A G  +L V++ T +       EV  AG+     C A +D  L++   WL    
Sbjct: 520 TNKYGQASGVINLKVRKPTIVQPFARAEEVRMAGEEMRLPCEATADNQLEVKYEWLVDGI 579

Query: 349 PIDFESEPR-----FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-VPL 402
           P+    E R     +  ++D+SL +   ++ DS +Y C   T+LD +E +  +  + VP+
Sbjct: 580 PL---PEARVNSGHYRIADDHSLIIANPTQDDSAKYKCIVSTKLDQVEKEIKIQFKDVPV 636

Query: 403 EAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSI---------- 452
              S +      ++  A + +  + P S     + + VQ   + + EGS           
Sbjct: 637 PVHSAYVDKCDKNSLTAFIKFEHIEPDSTIAPVKEFWVQYQMDSETEGSQWRTHPVPTEA 696

Query: 453 -------RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-----TP 500
                   +L    G +T +      P  K   RVLA N   +   + +          P
Sbjct: 697 HPHDRVENQLRTTPGSATVS----LQPFGKYVFRVLARNSVGDSAATTVKGMCETPAKQP 752

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKWVKP---EQPNGVLMGYKIKYQSV-KGTKVGPLLE-- 554
           +  PG V +    P       ++W KP   E+ NG    Y +KY+ V +  + G   E  
Sbjct: 753 DKNPGEVSAKGTSP---ENLIVQW-KPMAREEWNGANFHYVVKYRPVDEDQRDGEWKEVA 808

Query: 555 -RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG------DGAESKYLFYVPFKNPDN 607
              P+    T        ++P   Y + +      G      +  E +    VP   P  
Sbjct: 809 VEDPFADRVTINLDDDKDVKPFQPYEVQVQAVNSEGRTNVVPETVEGRTGEGVPSSIPSG 868

Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI-FW------RRHNTGEAWNQDDVLDWRQ 660
           +     +   + ++W  +  +  N     Y+I +W            +   +  +  W++
Sbjct: 869 LRVLEKSGTTVTLAWNGVDPLTANGNFTGYKITYWVDEADQDVDEPEDDEEEKRMFRWKR 928

Query: 661 SELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 720
           S              I++ +       +  +R+ IV    +T   +    PA+ N A + 
Sbjct: 929 S--------------IRMKR-------QSGVRKTIVFGPSATQGTITDLKPATLNHAYIQ 967

Query: 721 AFNGAYNGPPSEIISFVTPEG 741
             NGA+ G  S+ I F T EG
Sbjct: 968 VTNGAHEGAASDTIDFQTDEG 988



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 95/225 (42%), Gaps = 36/225 (16%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK------------- 446
            VP   PS   +++        ++WN V P +  G+F GYK+  W ++             
Sbjct: 861  VPSSIPSGLRVLEK-SGTTVTLAWNGVDPLTANGNFTGYKITYWVDEADQDVDEPEDDEE 919

Query: 447  -------------DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
                           +  +R+ IV    +T   +    PA+ N A +   NGA+ G  S+
Sbjct: 920  EKRMFRWKRSIRMKRQSGVRKTIVFGPSATQGTITDLKPATLNHAYIQVTNGAHEGAASD 979

Query: 494  IISFVTPEGVPGTVQSLEAIPLG------SSAFYLKWVKPEQPNGVLMGYKIKY-QSVKG 546
             I F T EGVP  V+S  A P+            L W KP Q NG L  Y+++Y ++  G
Sbjct: 980  TIDFQTDEGVPSPVRSFRAHPMNPLETSEKGVVNLVWKKPRQSNGKLARYEVEYCKTQNG 1039

Query: 547  TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             +V     R     DP     ++ GLE  T YR  +  +T AG+G
Sbjct: 1040 KQVEKTCPRQQI--DPDAKEVRITGLEHETPYRFIMRAHTSAGEG 1082



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 73/365 (20%), Positives = 124/365 (33%), Gaps = 33/365 (9%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPS---DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           + C   G P P   W KDG    PS   +++ Q     SL+   ++ SD G Y CE  N 
Sbjct: 65  IHCFANGNPRPTYRWKKDGKSFLPSMFPEKVVQKPGEGSLVFSRLDESDAGLYQCEAENS 124

Query: 110 VGEAKSYSIDLSVLAAPYFT-VEPEFINAAEEETVTFECK-ASGLPEPEIHWVHNGKPIS 167
            G A    + +      +F   EPE +     +     C   +  P   ++W+  GK   
Sbjct: 125 NGTAVDRPVRVQETWIRHFKPAEPEVVVVEVGDPYQRNCSPPASNPNARVYWILMGKEPG 184

Query: 168 QAPPNPRRKVGPN-------RITIENLRKSDTGNYGCNATNSLGYVYK-----DVYVNVL 215
                    +  N           E   KSD   Y C A N     YK      + +   
Sbjct: 185 HFETISSSHISSNEQGTLFFHYVNETDLKSDR-YYTCTAENIELKDYKFGNQFSLQITNN 243

Query: 216 AHAPEITEAPKDEY-------TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT----GGRY 264
                    P ++Y        + G    L C   G P P+  W HN +E++       +
Sbjct: 244 KRRSLQQMPPTEQYVNQSSPIALQGNQHKLHCFFSGYPAPKPRWFHNGREISEDSDAAGF 303

Query: 265 TILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
                G   + +V    +G+Y C    +    +    +           P +     G++
Sbjct: 304 RFESYGKTLVFNVTQDKAGKYDCRFATQNDIDRTFNVVVEAAPYWPLGPPPNTNTSEGEN 363

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL---DSGQYTC 381
            TF C     P+ K++  +  G E    + +   +Q    ++   K       D+  Y C
Sbjct: 364 VTFDCTTYGKPTPKVTF-YKNGVELAAQKDDRYLIQGTRLTIYDVKKGTYGKGDNAVYQC 422

Query: 382 RAQTE 386
           +++ +
Sbjct: 423 KSENK 427


>gi|402885644|ref|XP_003906259.1| PREDICTED: contactin-1 isoform 2 [Papio anubis]
          Length = 1007

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 186/728 (25%), Positives = 294/728 (40%), Gaps = 90/728 (12%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 230 PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 287

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 288 NIQLEDEGIYECEAENIRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 343

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 344 TGKPIPTIRWLKNGYAYHKG------ELRLYDVTFEN-----AGMYQCIAENTYGAIYAN 392

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 393 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 452

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 453 WEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENAT 512

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A SDP+L L+ VW      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 513 MQCAASSDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 572

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            AQT +D   A A L V+ P   P     I+ I A    ++W+  S          Y +Q
Sbjct: 573 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYTIQ 629

Query: 442 TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           T T    D + +  +  + +G          +P  +   RV+A N    G PS   + + 
Sbjct: 630 TKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNRIK 689

Query: 500 PEGVPGTVQSLEAIPLG--SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
            +G    V   +    G  +    + W  +  E   G   GY + ++   G +   +   
Sbjct: 690 TDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVT 749

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEG 610
            P   D      K   + PST +++ +  +   GDG  S           P + P  V  
Sbjct: 750 NP---DTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGV 806

Query: 611 RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT 670
           +  + + + + W  +  +E     ++ R +W  H+  EA N+  V              T
Sbjct: 807 KVLSSSEISVHWEHV--LEKIVESYQIR-YWAAHDKEEAANRVQV--------------T 849

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
            Q Y                            +  ++  +P ++ F  V A N A  GPP
Sbjct: 850 SQEY----------------------------SARLENLLPDTQYFIEVGACNSAGCGPP 881

Query: 731 SEIISFVT 738
           S+ I   T
Sbjct: 882 SDTIETFT 889



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 154/657 (23%), Positives = 245/657 (37%), Gaps = 85/657 (12%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 178 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVV 235

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  + A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 236 QFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 292

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N  G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 293 DEGIYECEAENIRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 351

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 352 RWLKN-----GYAY---HKGELRLYDVTFENAGMYQCIAENTYGAIYANAELKILALAPT 403

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   D SL 
Sbjct: 404 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 459

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC A+       +  TL +  P   + AP N  +    +A  +   S 
Sbjct: 460 INNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASS 519

Query: 424 NPVSPQSLRGHFRGYKVQ-----------TWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
           +P    +    F GY +               + +GE  IR   +      T      V 
Sbjct: 520 DPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVD 579

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
            S   A ++                    G PG    L    + +++  L W +    + 
Sbjct: 580 NSSASADLVV------------------RGPPGPPGGLRIEDIRATSVALTWSRGSDNHS 621

Query: 533 VLMGYKIKYQSV-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
            +  Y I+ +++     K  K  P     P I +    +A+   L P  +Y   +     
Sbjct: 622 PISKYTIQTKTILSDDWKDAKTDP-----PII-EGNMEAARAVDLIPWMEYEFRVVATNT 675

Query: 588 AGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            G G  S      K     P   P +V G G     L I+W  +    H   +F Y + +
Sbjct: 676 LGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAF 735

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
           +  + GE W +  V +      V  ++ T  P   +++KV     + DG  S+  +I
Sbjct: 736 KPFD-GEEWKKVTVTNPDTGRYVHKDE-TMSPSTAFQVKVKAFNNKGDGPYSLVAVI 790



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 140/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   ++  SDR S    G +L+I + +   D G Y C  S
Sbjct: 49  KVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 106

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 107 NSYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 160

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 161 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 217

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 218 LIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 277

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 278 STSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 337

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+       + E R      Y +T       ++G Y C A+ 
Sbjct: 338 YWPCVATGKPI--PTIRWLKNGYAY-HKGELRL-----YDVTFE-----NAGMYQCIAEN 384

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 385 TYGAIYANAELKI 397



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   +     +    VG N +   
Sbjct: 36  PINTIYPE---ESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTS-DRYSMVGGNLVINN 91

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+NS G V          +        + E  V +GK +VL C   +
Sbjct: 92  PDKQKDAGIYYCLASNSYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 151

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 152 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 211

Query: 299 SGSLT----VKEHT------HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                    + E T       I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 212 FSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV--PDIRWRKVLE 269

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 270 PMPSTAE---ISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 317



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+    ++V+ + +  V W  V    L      Y+++ W   D E +   + V   
Sbjct: 797 PSEAPTEVG-VKVLSSSEISVHWEHV----LEKIVESYQIRYWAAHDKEEAANRVQVTSQ 851

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GPPS+ I   T +  P     + +     S +
Sbjct: 852 E-YSARLENLLPDTQYFIEVGACNSAGCGPPSDTIETFTKKAPPSQPPRIISSIRSGSRY 910

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYK+ Y+
Sbjct: 911 IITWDHVVALSNESTVTGYKVLYR 934


>gi|440892313|gb|ELR45556.1| Contactin-3, partial [Bos grunniens mutus]
          Length = 877

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 170/632 (26%), Positives = 272/632 (43%), Gaps = 50/632 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P   S +I    +   L I + +  D GSY 
Sbjct: 88  AAKGSTVKLECFALGNPVPQINWRRSDGLPF--SSKIKLRKFSGVLEIPNFQQEDSGSYE 145

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    + +  A E+++ +EC+ASG P+P   W+ NG
Sbjct: 146 CIAENSRGKNVARG-RLTYYAKPHWVQLIKDVELAVEDSLYWECRASGKPKPSYRWLKNG 204

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + +       R ++    +TI NL  +D+G + C A N  G VY    + V+A AP+ ++
Sbjct: 205 EALVL---EERIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVMASAPDFSK 261

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
            P  +      G  V L C+   +P+   +W   +  +    R + L  G LKI +V  A
Sbjct: 262 TPMKKLIQVQVGSEVNLDCKPRASPRALSSWKKGEVIVQENERTSFLNDGGLKIVNVTKA 321

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L   
Sbjct: 322 DAGIYTCIAENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLATM 381

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF  +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 382 FTWYFNGALADFRKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADL 441

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
            V+     P +  + ++ D   A +SW       +PV   S++       G++  T    
Sbjct: 442 IVRGSPGPPESVKVDEITDT-TAQLSWKEGTDNHSPVIAYSVQARTPFSVGWQTAT---- 496

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 497 ----TVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 550

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S  +   GS S   + W  V  E  NG   GY + ++ +  T     ++ +    D 
Sbjct: 551 VPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTN---WIQTVVTSPDT 607

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y + +  Y   G+G  S    +F     P   P  V     + + 
Sbjct: 608 PRYVFRNESILPFSLYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTIAPSQVSANSLSSSE 667

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FWRRHNTGE 648
           + +SW A+P    N     Y + +W  +N GE
Sbjct: 668 IEVSWNAIPWKLSNGHLLGYEVRYW--NNGGE 697



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 160/637 (25%), Positives = 242/637 (37%), Gaps = 86/637 (13%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V  A+       ++           P   V+ PE + AA
Sbjct: 30  LYIAKVEPSDVGNYTCVVTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 89

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P S      + +     + I N ++ D+G+Y C
Sbjct: 90  KGSTVKLECFALGNPVPQINWRRSDGLPFSS---KIKLRKFSGVLEIPNFQQEDSGSYEC 146

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K+V    L +   P   +  KD       ++   CR  G PKP   W+ N
Sbjct: 147 IAENSRG---KNVARGRLTYYAKPHWVQLIKDVELAVEDSLYWECRASGKPKPSYRWLKN 203

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITD 312
            + L       +E G L I+++   DSG + C A NK G    S  L V         T 
Sbjct: 204 GEALVLEERIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVMASAPDFSKTP 263

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
             +  +V+ G      C   + P    S  W +G   +       F+  ND  L +   +
Sbjct: 264 MKKLIQVQVGSEVNLDCKPRASPRALSS--WKKGEVIVQENERTSFL--NDGGLKIVNVT 319

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAV-----VSWN 424
           + D+G YTC A+ +         L V  P     APSN      +   ++V     V  +
Sbjct: 320 KADAGIYTCIAENQFGKANGTTHLVVTEPTRITLAPSNMD----VSVGESVILPCQVQHD 375

Query: 425 PVSPQSLRGHFRG-----YKVQTWTEKDGEGSIRELIVNKGE---------STTTEVDKF 470
           P+       +F G      K  +  EK G  S  +L++   +            T VD  
Sbjct: 376 PLLATMFTWYFNGALADFRKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSV 435

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
             A+    R                      G PG  +S++   +  +   L W +    
Sbjct: 436 SSAADLIVR----------------------GSPGPPESVKVDEITDTTAQLSWKEGTDN 473

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           +  ++ Y +  Q+     VG      +P + D  T +A +  L P  +Y   +    K G
Sbjct: 474 HSPVIAYSV--QARTPFSVGWQTATTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIG 531

Query: 590 DGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  S      +    VP   P  V G G + + LVI+W  +PE   N   F Y + +R 
Sbjct: 532 GGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRP 591

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
                 W Q  V        V  N+    F  YE+KV
Sbjct: 592 LGVTN-WIQTVVTSPDTPRYVFRNESILPFSLYEVKV 627



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 165/729 (22%), Positives = 277/729 (37%), Gaps = 106/729 (14%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +   +RI   N   +L I ++  +D G + C   N  G   
Sbjct: 188 CRASGKPKPSYRWLKNGEALVLEERIQIEN--GALTISNLNVTDSGMFQCIAENKHGLVY 245

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           S S +L V+A AP F+  P  + I       V  +CK    P     W   G+ I Q   
Sbjct: 246 S-SAELKVMASAPDFSKTPMKKLIQVQVGSEVNLDCKPRASPRALSSW-KKGEVIVQE-- 301

Query: 172 NPRRK-VGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
           N R   +    + I N+ K+D G Y C A N  G      ++ V+     IT AP +   
Sbjct: 302 NERTSFLNDGGLKIVNVTKADAGIYTCIAENQFGKANGTTHL-VVTEPTRITLAPSNMDV 360

Query: 231 VDGKTVVLTCRVFGAP--KPEVNWIHN-----------QKELTGGRYTILETGDLKITDV 277
             G++V+L C+V   P       W  N             E  GG      +GDL I ++
Sbjct: 361 SVGESVILPCQVQHDPLLATMFTWYFNGALADFRKDGSHFEKVGGS----SSGDLMIRNI 416

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
               SG+Y C  +  + +   +  L V+                G   + + + ++D + 
Sbjct: 417 QLKHSGKYVCMVQTGVDSVSSAADLIVRGS-------------PGPPESVKVDEITDTTA 463

Query: 338 KLSIVWLRGSEP----IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA-----QTELD 388
           +LS  W  G++     I +  + R   S  +    T    +D   +T          E +
Sbjct: 464 QLS--WKEGTDNHSPVIAYSVQARTPFSVGWQTATTVPEVIDGKTHTATVVELNPWVEYE 521

Query: 389 F--------------IEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
           F              + ++   T +   E P +          + V++W+PV  +   G 
Sbjct: 522 FRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGE 581

Query: 435 -------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
                  FR   V  W +           V + ES        +P S    +V  +N   
Sbjct: 582 GFGYVVAFRPLGVTNWIQTVVTSPDTPRYVFRNES-------ILPFSLYEVKVGVYNNKG 634

Query: 488 NGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSV 544
            GP S + +  + E  P    S + A  L SS   + W  +  +  NG L+GY+++Y + 
Sbjct: 635 EGPFSPVTTVFSAEEEPTIAPSQVSANSLSSSEIEVSWNAIPWKLSNGHLLGYEVRYWNN 694

Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
            G +      +L    +   TSA+L GL+ +  Y   +  +  AG G  S  +       
Sbjct: 695 GGEEDSS--SKLKVAGN--VTSARLRGLKSNLAYYTAVRAFNSAGTGPFSATVNATTKKT 750

Query: 601 -PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
            P + P NV    +T   ++++W  +  +E+ +    Y++F+R  +     N   VL+  
Sbjct: 751 PPSQPPGNVVWN-ATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQ----NNVQVLNTN 805

Query: 660 Q--SELVLANQPTFQPYEIKVVQTWTEKDGEGS----IRELIVNKGESTTTEVDKFVPAS 713
           +  +EL+L   P  + Y I+V  T    DG  S    I  +        T+ +    P S
Sbjct: 806 KTSAELLL---PIKEDYIIEVKATTDGGDGTSSEQIRIPRITNMDARGCTSAISTVYPVS 862

Query: 714 KNFARVLAF 722
              + ++ F
Sbjct: 863 SYVSVIMFF 871


>gi|402859571|ref|XP_003894226.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
           [Papio anubis]
          Length = 1225

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 180/713 (25%), Positives = 293/713 (41%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 269 LKGETLLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYGKTLKIENVSYQDKGNYRCT 327

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG P
Sbjct: 328 ASNFLGTA-THDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 386

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           I   P      V P  I+  NL+ + T  Y C A+N  G +     V+V+   P I    
Sbjct: 387 IDNHP-FAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILASANVDVVDVRPLIQTKD 445

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            + Y TV G +  L C  F +P+  V+W  +   K L G RY + + G L+I      D+
Sbjct: 446 GENYATVVGYSAFLHCEFFASPEAVVSWQKVEEAKPLEGRRYHVYDNGTLQINRTTEEDA 505

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L 
Sbjct: 506 GSYSCWVENAIGKTAVTANLDIRNATQLRVSPKNPRIPKLHMLELHCESKCDLHLKHSLK 565

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y C A T LD       +TV 
Sbjct: 566 LSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVL 625

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   +SW   +      +   Y V+    K+  G   EL   +
Sbjct: 626 DVPDPPENLHLSERQN-RSVRLSWE--AGDDHNSNISEYIVEFEGNKEDPGRWEELTRVQ 682

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 683 GKKTTV-ILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 741

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 742 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 792

Query: 576 T--KYRIHLAGYTKAGDG-AESKYLFYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G A      Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 793 VYAPYDVKVQAINQLGSGPAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKD 852

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ V++        
Sbjct: 853 RVHGRLKGYQINW--------WKTKSLLDGRT-----------HPKEVNVLRF------- 886

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 887 ---------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTPEG 930



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 142/648 (21%), Positives = 257/648 (39%), Gaps = 71/648 (10%)

Query: 54  FCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113
           +C F   P  +TI  K  +P+              L +  ++ ++  S + E+ +     
Sbjct: 202 YCCFAAFPRLRTIVQK--MPM-------------KLTVNSLKHANDSSSSTEIGSKANSI 246

Query: 114 KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           K     L  L  P  +     I   + ET+  EC A GLP P++ W   G  + +     
Sbjct: 247 KQRKPKL--LLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKG---- 300

Query: 174 RRKVGPN---RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
            R+   N    + IEN+   D GNY C A+N LG    D +V ++   P  T+ P+    
Sbjct: 301 -RETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHV-IVEEPPRWTKKPQSAVY 358

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCF 288
             G   +L C   G P+P + W  N   +    +   ++   ++  T++    +  Y C 
Sbjct: 359 STGSNGILLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTAVYQCE 418

Query: 289 ARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           A N  GT   S ++ V +   +  T   E+Y    G SA   C   + P   +S  W + 
Sbjct: 419 ASNVHGTILASANVDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS--WQKV 476

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE--- 403
            E    E   R+   ++ +L + +++E D+G Y+C  +  +      A L ++   +   
Sbjct: 477 EEAKPLEGR-RYHVYDNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNATQLRV 535

Query: 404 APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG------SIRELIV 457
           +P N  +      K  ++  +  S   L  H +     +W+ KDGE           +I+
Sbjct: 536 SPKNPRI-----PKLHMLELHCESKCDL--HLKHSLKLSWS-KDGEAFEINGTEDGRIII 587

Query: 458 NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS 517
           +    T + V          + + A + A +      I+ VT   VP   ++L      +
Sbjct: 588 DGANLTISNVTLEDQGIYCCSALTALDSAAD------ITQVTVLDVPDPPENLHLSERQN 641

Query: 518 SAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPST 576
            +  L W   +  N  +  Y ++++   G K  P   E L  +    TT   +  L P  
Sbjct: 642 RSVRLSWEAGDDHNSNISEYIVEFE---GNKEDPGRWEELTRVQGKKTTV--ILPLAPFV 696

Query: 577 KYRIHLAGYTKAGDGAESKYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEH 630
           +Y+  +    + G    S+   +       P +NP N+  + S P  ++I W  +  +E 
Sbjct: 697 RYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQ 756

Query: 631 NAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           N P  +YR+ W+       W ++ V +     L +     + PY++KV
Sbjct: 757 NGPGLEYRVTWKPQGAPVEWEEETVTN---HTLRVMTPAVYAPYDVKV 801



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 132/577 (22%), Positives = 228/577 (39%), Gaps = 55/577 (9%)

Query: 53   LFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L C F  +P     W K  +  P+    R    + G +L I      D GSY+C V N +
Sbjct: 459  LHCEFFASPEAVVSWQKVEEAKPLE-GRRYHVYDNG-TLQINRTTEEDAGSYSCWVENAI 516

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--------WVHN 162
            G+  + + +L +  A    V P+     +   +   C++      ++H        W  +
Sbjct: 517  GKT-AVTANLDIRNATQLRVSPKNPRIPKLHMLELHCESKC----DLHLKHSLKLSWSKD 571

Query: 163  GKPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
            G+        + R  +    +TI N+   D G Y C+A  +L        V VL    ++
Sbjct: 572  GEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVL----DV 627

Query: 222  TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG-----GRYTILETGDLKITD 276
             + P++ +  + +   +            N      E  G     GR+  L     K T 
Sbjct: 628  PDPPENLHLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEDPGRWEELTRVQGKKTT 687

Query: 277  VAFADSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSAT---- 326
            V    +     ++   A N++G +Q S      E         P++  V+A Q       
Sbjct: 688  VILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIK 747

Query: 327  ---FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
                +    + P L+  + W     P+++E E       +++L V   +         +A
Sbjct: 748  WEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TVTNHTLRVMTPAVYAPYDVKVQA 803

Query: 384  QTELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
              +L    A  ++T+    + P    +I    VI++    V+W+ +    + G  +GY++
Sbjct: 804  INQLGSGPAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQI 863

Query: 441  QTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
              W  K   DG    +E+ V +  G+  +  V      S+    VLA+N    GP SE  
Sbjct: 864  NWWKTKSLLDGRTHPKEVNVLRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPY 923

Query: 496  SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE 554
             F TPEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T ++G L +
Sbjct: 924  IFQTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGNLTGYLLQYQIINDTYEIGELND 983

Query: 555  RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
                I+ P+  S  L+ L  +TKY+ +L   T  G G
Sbjct: 984  I--NITTPSKPSWHLSNLNATTKYKFYLRACTSRGCG 1018



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 192/477 (40%), Gaps = 69/477 (14%)

Query: 12  GNRILLNVIATGISASQNRHAPK--QQYVTRKKEVALR-----NKKVELFCIFGGTPLPQ 64
           G R+++++I   +  S     P   QQ  T  K+  ++     ++  ++ C   G P P 
Sbjct: 7   GRRLIISLIFFLLKFSTAIEIPPSVQQVPTIIKQSKVQVAFPFDEYFQIECEAKGNPEPT 66

Query: 65  TIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSNGVGEAKSYSIDLS 121
             W+KDG P   +D   I+  N G   I      S  QG Y C  SN +G A S  I+  
Sbjct: 67  FTWTKDGNPFYFTDHRIITSNNSGTFRIPNEGHISHFQGKYRCFASNKLGIAMSEEIEFI 126

Query: 122 VLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKPISQAPPNPRRKVG 178
           V + P F  E  + +   E + +   C    GLP   I+W++   + I Q       + G
Sbjct: 127 VPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEHIEQDERVYMSQKG 186

Query: 179 PNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA-------------- 218
              +   N+ + D+ N Y C A        +  +   + VN L HA              
Sbjct: 187 --DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHANDSSSSTEIGSKAN 244

Query: 219 ------PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
                 P++   P +  +      + G+T++L C   G P P+V+W     +L  GR T 
Sbjct: 245 SIKQRKPKLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETK 304

Query: 267 LETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
              G  LKI +V++ D G Y C A N LGTA     + V+E    T +P+      G + 
Sbjct: 305 ENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKKPQSAVYSTGSNG 364

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPID---------FESEPRF--VQSNDYSLTVTKSSEL 374
              C A  +P  + +I W     PID         F  E  F  +Q N  ++   ++S +
Sbjct: 365 ILLCEAEGEP--QPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNV 422

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDAKKAVVSWNPV 426
                T  A   +D ++ +  +  +       +   S F   +   + +AVVSW  V
Sbjct: 423 HG---TILASANVDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV 476


>gi|114585162|ref|XP_001136954.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 6
           [Pan troglodytes]
 gi|410288982|gb|JAA23091.1| cell adhesion molecule with homology to L1CAM (close homolog of L1)
           [Pan troglodytes]
          Length = 1225

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 177/713 (24%), Positives = 297/713 (41%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 269 LKGEILLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYGKTLKIENVSYQDKGNYRCT 327

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG P
Sbjct: 328 ASNFLGTA-THDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 386

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +   P      V P  I+  NL+ + T  Y C A+N  G +  +  ++V+   P I    
Sbjct: 387 VDNHP-FAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQTKD 445

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            + Y TV G +  L C  F +P+  V+W  +   K L G RY I E G L+I      D+
Sbjct: 446 GENYATVVGYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDA 505

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L 
Sbjct: 506 GSYSCWVENAIGKTAVTANLDIRNATKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLK 565

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y C A T LD       +TV 
Sbjct: 566 LSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVL 625

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +  +   +   Y V+    K+  G   EL   +
Sbjct: 626 DVPDPPENLHLSERQN-RSVRLTWEAGADHN--SNISEYIVEFEGNKEEPGRWEELTRVQ 682

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 683 GKKTTV-ILPLAPFVRYQFRVIAVNEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQP 741

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 742 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 792

Query: 576 T--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G + + +  Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 793 VYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKD 852

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ +++        
Sbjct: 853 RVHGRLKGYQINW--------WKTKSLLDGRT-----------HPKEVNILRF------- 886

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 887 ---------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTPEG 930



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 138/648 (21%), Positives = 248/648 (38%), Gaps = 71/648 (10%)

Query: 54  FCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113
           +C F   P  +TI  K  +P+              L +  ++ ++  S + E+ +     
Sbjct: 202 YCCFAAFPRLRTIVQK--MPMK-------------LTVNSLKHANDSSSSTEIGSKANSI 246

Query: 114 KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           K     L  L  P  +     I   + E +  EC A GLP P++ W   G  + +     
Sbjct: 247 KQRKPKL--LLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKG---- 300

Query: 174 RRKVGPN---RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
            R+   N    + IEN+   D GNY C A+N LG    D +V ++   P  T+ P+    
Sbjct: 301 -RETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHV-IVEEPPRWTKKPQSAVY 358

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCF 288
             G   +L C   G P+P + W  N   +    +   ++   ++  T++    +  Y C 
Sbjct: 359 STGSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCE 418

Query: 289 ARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           A N  GT   + ++ V +   +  T   E+Y    G SA   C   + P   +S  W + 
Sbjct: 419 ASNVHGTILANANIDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS--WQKV 476

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPS 406
            E    E     +  N  +L + +++E D+G Y+C  +  +      A L ++       
Sbjct: 477 EEVKPLEGRRYHIYENG-TLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR------- 528

Query: 407 NFTLIQVIDAKKAVVSWNPV---SPQSLRGHFRGYKVQTWTEKDGEG------SIRELIV 457
           N T ++V      +   + +          H +     +W+ KDGE           +I+
Sbjct: 529 NATKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWS-KDGEAFEINGTEDGRIII 587

Query: 458 NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS 517
           +    T + V          +   A + A +      I+ VT   VP   ++L      +
Sbjct: 588 DGANLTISNVTLEDQGIYCCSAHTALDSAAD------ITQVTVLDVPDPPENLHLSERQN 641

Query: 518 SAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPST 576
            +  L W      N  +  Y ++++   G K  P   E L  +    TT   +  L P  
Sbjct: 642 RSVRLTWEAGADHNSNISEYIVEFE---GNKEEPGRWEELTRVQGKKTTV--ILPLAPFV 696

Query: 577 KYRIHLAGYTKAGDGAESKYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEH 630
           +Y+  +    + G    S+           P +NP N+  + S P  ++I W  +  +E 
Sbjct: 697 RYQFRVIAVNEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQ 756

Query: 631 NAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           N P  +YR+ W+       W ++ V +     L +     + PY++KV
Sbjct: 757 NGPGLEYRVTWKPQGAPVEWEEETVTN---HTLRVMTPAVYAPYDVKV 801



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 127/539 (23%), Positives = 223/539 (41%), Gaps = 49/539 (9%)

Query: 88   SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
            +L I      D GSY+C V N +G+  + + +L +  A    V P+     +   +   C
Sbjct: 494  TLQINRTTEEDAGSYSCWVENAIGKT-AVTANLDIRNATKLRVSPKNPRIPKLHMLELHC 552

Query: 148  KA---SGLPEP-EIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202
            ++   S L    ++ W  +G+        + R  +    +TI N+   D G Y C+A  +
Sbjct: 553  ESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTA 612

Query: 203  LGYVYKDVYVNVLAHAPEITEAPKDEYTVD--GKTVVLTCRVFGAPKPE------VNWIH 254
            L        V VL    ++ + P++ +  +   ++V LT    GA          V +  
Sbjct: 613  LDSAADITQVTVL----DVPDPPENLHLSERQNRSVRLTWEA-GADHNSNISEYIVEFEG 667

Query: 255  NQKELTGGRYTILETGDLKITDVAFADSG----EYTCFARNKLGTAQGSGSLTVKEHTHI 310
            N++E   GR+  L     K T V    +     ++   A N++G +Q S      E    
Sbjct: 668  NKEE--PGRWEELTRVQGKKTTVILPLAPFVRYQFRVIAVNEVGRSQPSQPSDRHETPPA 725

Query: 311  T--DQPEDYEVEAGQSAT-------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS 361
                 P++  V+A Q           +    + P L+  + W     P+++E E      
Sbjct: 726  APDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TV 781

Query: 362  NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKK 418
             +++L V   +         +A  +L       ++T+    + P    +I    VI++  
Sbjct: 782  TNHTLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTL 841

Query: 419  AVVSWNPVSPQSLRGHFRGYKVQTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPA 473
              V+W+ +    + G  +GY++  W  K   DG    +E+ + +  G+  +  V      
Sbjct: 842  VKVTWSTIPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAF 901

Query: 474  SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV 533
            S+    VLA+N    GP SE   F TPEGVP     L+ I +      L W  P++ NG 
Sbjct: 902  SEFHLTVLAYNSKGAGPESEPYIFQTPEGVPEQPTFLKVIKVDKDTATLSWGVPKKLNGN 961

Query: 534  LMGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            L GY ++YQ +  T ++G L +    I+ P+  S  L+ L  +TKY+ +L   T  G G
Sbjct: 962  LTGYLLQYQIINDTYEIGELNDI--NITTPSKPSWHLSNLNATTKYKFYLRACTSQGCG 1018



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 171/430 (39%), Gaps = 62/430 (14%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P   W+KDG P   +D   ++  N G   I      S  QG Y C  SN
Sbjct: 54  QIECEAKGNPEPIFSWTKDGNPFYFTDHRIMTSNNSGTFRIPNEGHISHFQGKYRCFASN 113

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKP 165
            +G A S  I+  V + P F  E  + +   E + +   C    GLP   I+W++   + 
Sbjct: 114 KLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEH 173

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA- 218
           I Q       + G   +   N+ + D+ N Y C A        +  +   + VN L HA 
Sbjct: 174 IEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHAN 231

Query: 219 -------------------PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWI 253
                              P++   P +  +      + G+ ++L C   G P P+V+W 
Sbjct: 232 DSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWN 291

Query: 254 HNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD 312
               +L  GR T    G  LKI +V++ D G Y C A N LGTA     + V+E    T 
Sbjct: 292 KIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTK 351

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID---------FESEPRF--VQS 361
           +P+      G +    C A  +P  + +I W     P+D         F  E  F  +Q 
Sbjct: 352 KPQSAVYSTGSNGILLCEAEGEP--QPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQP 409

Query: 362 NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDA 416
           N  ++   ++S +     T  A   +D ++ +  +  +       +   S F   +   +
Sbjct: 410 NHTAVYQCEASNVHG---TILANANIDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFAS 466

Query: 417 KKAVVSWNPV 426
            +AVVSW  V
Sbjct: 467 PEAVVSWQKV 476



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 92/244 (37%), Gaps = 21/244 (8%)

Query: 86  GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTF 145
           G+ LI+  + F  + S   E+ + V +  +      V  A  F           +E    
Sbjct: 7   GRGLIVSLIFFLLKFSKAIEIPSSVQQVPTIIKQSKVQVAFPF-----------DEYFQI 55

Query: 146 ECKASGLPEPEIHWVHNGKP--ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSL 203
           EC+A G PEP   W  +G P   +          G  RI  E       G Y C A+N L
Sbjct: 56  ECEAKGNPEPIFSWTKDGNPFYFTDHRIMTSNNSGTFRIPNEGHISHFQGKYRCFASNKL 115

Query: 204 GYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHNQKELT- 260
           G    +    ++   P+  +   D   V +G  +VL C    G P   + W++ + E   
Sbjct: 116 GIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEHIE 175

Query: 261 -GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTHITDQPE 315
              R  + + GDL   +V   DS  +Y CFA   R +    +    LTV    H  D   
Sbjct: 176 QDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHANDSSS 235

Query: 316 DYEV 319
             E+
Sbjct: 236 STEI 239


>gi|7657361|ref|NP_055276.1| contactin-6 precursor [Homo sapiens]
 gi|55976622|sp|Q9UQ52.1|CNTN6_HUMAN RecName: Full=Contactin-6; AltName: Full=Neural recognition
           molecule NB-3; Short=hNB-3; Flags: Precursor
 gi|5631291|dbj|BAA82612.1| neural adhesion molecule NB-3 [Homo sapiens]
 gi|86577727|gb|AAI13119.1| Contactin 6 [Homo sapiens]
 gi|119584275|gb|EAW63871.1| contactin 6, isoform CRA_a [Homo sapiens]
 gi|119584276|gb|EAW63872.1| contactin 6, isoform CRA_a [Homo sapiens]
          Length = 1028

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 181/715 (25%), Positives = 303/715 (42%), Gaps = 76/715 (10%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    + S+      L I + +  D+G Y 
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQ--AILEIPNFQQEDEGFYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C  SN  G   +    L   A P +  + +  + +  + + +ECKASG P P   W+ NG
Sbjct: 297 CIASNLRGRNLAKG-QLIFYAPPEWEQKIQNTHLSIYDNLLWECKASGKPNPWYTWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++   P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 356 ERLN---PEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSK 412

Query: 224 AP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
           +P  K  +   G  +V+ C+    P+  ++W    + L    R  +LE G LKI ++  +
Sbjct: 413 SPVKKKSFVQVGGDIVIGCKPNAFPRAAISWKRGTETLRQSKRIFLLEDGSLKIYNITRS 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ GTA+ +GSL VKE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 473 DAGSYTCIATNQFGTAKNTGSLIVKERTVITVPPSKMDVTVGESIVLPCQVSHDPSIEVV 532

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            VW    + ID +       R    +   L +       SG+Y C  QT L+ + A A +
Sbjct: 533 FVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADI 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW    P +     + + +QT T          ++
Sbjct: 593 IVRGPPGPPEDVQ-VEDISSTTSQLSWR-AGPDN-NSPIQIFTIQTRTPFSVGWQAVATV 649

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA 512
            E++   G++    V    P  +   RV+A N    G PSE    +  +     V  +  
Sbjct: 650 PEIL--NGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNI 707

Query: 513 IPLGS--SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
              G   S   + W  +  E  NG   GY I ++ V  T      E++  + + +    +
Sbjct: 708 HGGGGSRSELVITWESIPEELQNGEGFGYIIMFRPVGSTTWSK--EKVSSV-ESSRFVYR 764

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS-----TPNNLVISWT 623
              + P + + + +  Y   G+G+ S        ++   +  RG+     + + + +SW 
Sbjct: 765 NESIIPLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSLQSFSASEMEVSWN 824

Query: 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWT 683
           A+                       AWN       R +  VL        YE   V  WT
Sbjct: 825 AI-----------------------AWN-------RNTGRVLG-------YE---VLYWT 844

Query: 684 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           +   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S  ++  T
Sbjct: 845 DDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGTGPSSPPVNVTT 898



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 162/660 (24%), Positives = 259/660 (39%), Gaps = 87/660 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC ++N   EA+      SV   P   V+                
Sbjct: 180 NLYIAKVEPSDVGNYTCFITNK--EAQR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 232

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ +V  EC A G P P+I W   +G P+   P   +       + I N ++
Sbjct: 233 FPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPL---PGKVKYSKSQAILEIPNFQQ 289

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A+N  G       + +    PE  +  ++ +      ++  C+  G P P 
Sbjct: 290 EDEGFYECIASNLRGRNLAKGQL-IFYAPPEWEQKIQNTHLSIYDNLLWECKASGKPNPW 348

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L       +E G L IT +  +DSG Y C A NK      +  L V     
Sbjct: 349 YTWLKNGERLNPEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAP 408

Query: 309 HITDQPEDYE--VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P   +  V+ G      C   + P  + +I W RG+E +      R     D SL
Sbjct: 409 DFSKSPVKKKSFVQVGGDIVIGCKPNAFP--RAAISWKRGTETL--RQSKRIFLLEDGSL 464

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV------ 420
            +   +  D+G YTC A  +    +   +L V+         T+I V  +K  V      
Sbjct: 465 KIYNITRSDAGSYTCIATNQFGTAKNTGSLIVK-------ERTVITVPPSKMDVTVGESI 517

Query: 421 -----VSWNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKF 470
                VS +P         F G  +         E+ G  S+ +L++   +       K+
Sbjct: 518 VLPCQVSHDPSIEVVFVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQ--LHHSGKY 575

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
           +   +     L+            ++ +   G PG  + ++   + S+   L W      
Sbjct: 576 LCTVQTTLESLS-----------AVADIIVRGPPGPPEDVQVEDISSTTSQLSWRAGPDN 624

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           N  +  + I  Q+     VG   +  +P I +  T +A + GL P  +Y   +      G
Sbjct: 625 NSPIQIFTI--QTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIG 682

Query: 590 DG--AESKYLFY----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  +E   L      VP   P N+ G G + + LVI+W ++PE   N   F Y I +R 
Sbjct: 683 IGEPSEPSELLRTKASVPVVAPVNIHGGGGSRSELVITWESIPEELQNGEGFGYIIMFRP 742

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
             +   W+++ V     S  V  N+      P+E+KV       +GEGS+  + IV  GE
Sbjct: 743 VGS-TTWSKEKVSSVESSRFVYRNESIIPLSPFEVKV--GVYNNEGEGSLSTVTIVYSGE 799



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 164/718 (22%), Positives = 278/718 (38%), Gaps = 93/718 (12%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  +NP +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 339  CKASGKPNPWYTWLKNGERLNPEERIQIEN--GTLIITMLNVSDSGVYQCAAENKY-QII 395

Query: 115  SYSIDLSVLA-APYFTVEP----EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
              + +L VLA AP F+  P     F+    +  +   CK +  P   I W    + + Q+
Sbjct: 396  YANAELRVLASAPDFSKSPVKKKSFVQVGGD--IVIGCKPNAFPRAAISWKRGTETLRQS 453

Query: 170  PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
                  + G   + I N+ +SD G+Y C ATN  G   K+    ++     IT  P    
Sbjct: 454  KRIFLLEDG--SLKIYNITRSDAGSYTCIATNQFGTA-KNTGSLIVKERTVITVPPSKMD 510

Query: 230  TVDGKTVVLTCRVFGAPKPEVN--WIHN-----------QKELTGGRYTILETGDLKITD 276
               G+++VL C+V   P  EV   W  N             E  GG       GDL I +
Sbjct: 511  VTVGESIVLPCQVSHDPSIEVVFVWFFNGDVIDLKKGVAHFERIGGE----SVGDLMIRN 566

Query: 277  VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSD 334
            +    SG+Y C  +  L +      + V+        PED +VE   S T + +  A  D
Sbjct: 567  IQLHHSGKYLCTVQTTLESLSAVADIIVRGPP---GPPEDVQVEDISSTTSQLSWRAGPD 623

Query: 335  PSLKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
             +  + I  ++   P         + P  +    Y+ TV   S     ++   A   +  
Sbjct: 624  NNSPIQIFTIQTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGI 683

Query: 390  IEAQ-----ATLTVQVPLEAPSNFTLIQVIDAKKA--VVSWNPVSPQSLRGHFRGYKVQ- 441
             E             VP+ AP N   I      ++  V++W  +  +   G   GY +  
Sbjct: 684  GEPSEPSELLRTKASVPVVAPVN---IHGGGGSRSELVITWESIPEELQNGEGFGYIIMF 740

Query: 442  ------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
                  TW+++          V + ES        +P S    +V  +N    G  S + 
Sbjct: 741  RPVGSTTWSKEKVSSVESSRFVYRNES-------IIPLSPFEVKVGVYNNEGEGSLSTVT 793

Query: 496  SFVTPEGVP------GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGT 547
               + E  P       ++QS  A  +  S   + W    +  G ++GY++ Y     K +
Sbjct: 794  IVYSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDSKES 850

Query: 548  KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PF 602
             +G +      +S   TT   + GL+ +T Y   +  Y  AG G  S  +        P 
Sbjct: 851  MIGKI-----RVSGNVTTK-NITGLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPS 904

Query: 603  KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
            + P N+  +  T + L ++W  +  +E+ +    Y+I +R++      ++  +L+   + 
Sbjct: 905  QPPANIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQNRQ----SKTHILETNNTS 959

Query: 663  LVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 720
              L   P  + Y I++       DG  S  E+ + K  S ++   +F+  S +F  ++
Sbjct: 960  AELL-VPFEEDYLIEIRTVSDGGDGSSS-EEIRIPKMSSLSSRGIQFLEPSTHFLSIV 1015



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 135/380 (35%), Gaps = 44/380 (11%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK--HVEFSDQGSYT 103
           L   +V L C   G P P   W ++G  I+ +        G SL I   H +  D G Y 
Sbjct: 41  LSKSEVILNCAANGYPSPHYRWKQNGTDIDFTMSYHYRLDGGSLAINSPHTD-QDIGMYQ 99

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPEI----- 157
           C  +N +G   S    L       F T     ++  E + V   C     P P       
Sbjct: 100 CLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCG----PPPHFGDLSY 155

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY---------- 205
            W  N  P+     N RR V      + I  +  SD GNY C  TN              
Sbjct: 156 AWTFNDNPLYVQEDN-RRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPPTPL 214

Query: 206 ------VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKE 258
                 V  +    +    PE  +A KD       +V L C   G P P+++W   +   
Sbjct: 215 VQRTDGVMGEYEPKIEVRFPETIQAAKD------SSVKLECFALGNPVPDISWRRLDGSP 268

Query: 259 LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYE 318
           L G          L+I +    D G Y C A N  G     G L          + ++  
Sbjct: 269 LPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPPEWEQKIQNTH 328

Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQ 378
           +    +  + C A   P+   +  WL+  E ++ E     +Q  + +L +T  +  DSG 
Sbjct: 329 LSIYDNLLWECKASGKPNPWYT--WLKNGERLNPEER---IQIENGTLIITMLNVSDSGV 383

Query: 379 YTCRAQTELDFIEAQATLTV 398
           Y C A+ +   I A A L V
Sbjct: 384 YQCAAENKYQIIYANAELRV 403



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 105/286 (36%), Gaps = 32/286 (11%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L+ P FT EP    F     +  V   C A+G P P   W  NG  I        R  G
Sbjct: 22  LLSRPIFTQEPHDVIFPLDLSKSEVILNCAANGYPSPHYRWKQNGTDIDFTMSYHYRLDG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            +          D G Y C ATN LG +         A+  +     +   +V +G+ VV
Sbjct: 82  GSLAINSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        W  N   L       R+   ETG+L I  V  +D G YTCF
Sbjct: 142 LLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCF 197

Query: 289 ARNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSL 337
             NK    + QG  +  V+    +  +         PE  +     S    C A+ +P  
Sbjct: 198 ITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            +S   L GS       + ++ +S    L +    + D G Y C A
Sbjct: 258 DISWRRLDGSP---LPGKVKYSKSQAI-LEIPNFQQEDEGFYECIA 299


>gi|410899609|ref|XP_003963289.1| PREDICTED: contactin-4-like [Takifugu rubripes]
          Length = 1027

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 183/389 (47%), Gaps = 15/389 (3%)

Query: 47  RNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           ++  V+L C   G P+P   W ++G   +   ++        L I + +  D G Y C  
Sbjct: 243 KSSTVKLECFALGNPVPTISWRREG-GASFGRKVDVNKASGVLEIPYFQMEDAGVYECVA 301

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPI 166
            N  G        LS  AAP  T +P+ +    ++T+ +ECKA+G P+P   W+ NG+P+
Sbjct: 302 ENSRGR-NLVKGKLSFYAAPQLTEKPQDVQKTIDDTLVWECKANGKPKPSYRWLKNGEPL 360

Query: 167 SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
                  R +V    + I +L  +D G Y C A N  G V+ +  + V+A AP+ ++   
Sbjct: 361 DHM--EDRLQVNNGVLNITSLNLADIGMYQCVAENRHGRVFTNAELRVVAIAPDFSQNLL 418

Query: 227 DEYTV--DGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSG 283
              T+   G  V++ C+   +P+  ++W   ++ L    R T+L+ G L+I++V   D G
Sbjct: 419 KAQTLARQGGDVLIECKPRMSPRGIISWRKGKEALRENHRVTVLDNGSLRISNVTRLDDG 478

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVW 343
            YTC ARN+ G A  +GSL VKE T IT      +V  G+S    C    DP+L+L   W
Sbjct: 479 LYTCVARNQFGVASSAGSLLVKEPTAITSPAGHLDVTVGESIVLPCQVSHDPTLELKFTW 538

Query: 344 LRGSEPIDFESEPRFVQS-------NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
               + I F +   F +        +   + +       +G+YTC  QT++D +     +
Sbjct: 539 FFNEQLIHFGNLWAFFEKVGGVSERSSGDIMIRNIQPKHAGKYTCAVQTKVDSVSIATDV 598

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            V+ P   P +  +  V +   A VSW P
Sbjct: 599 VVRGPPGPPGDCRVTAVTE-NTASVSWAP 626



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 156/636 (24%), Positives = 239/636 (37%), Gaps = 78/636 (12%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS----IDLSVLAA-----PYFTVE-PEFINA 137
           +L I  V+ SD G+YTC V+N V ++        + L V        P   V+ PE +  
Sbjct: 182 NLYIAKVDPSDVGNYTCVVTNTVTKSSVQGPPTPLVLRVDGVMGEYEPKIEVQFPEVVPV 241

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR----ITIENLRKSDTG 193
           A+  TV  EC A G P P I W   G        +  RKV  N+    + I   +  D G
Sbjct: 242 AKSSTVKLECFALGNPVPTISWRREGG------ASFGRKVDVNKASGVLEIPYFQMEDAG 295

Query: 194 NYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWI 253
            Y C A NS G       ++  A AP++TE P+D       T+V  C+  G PKP   W+
Sbjct: 296 VYECVAENSRGRNLVKGKLSFYA-APQLTEKPQDVQKTIDDTLVWECKANGKPKPSYRWL 354

Query: 254 HNQKELTGGRYTI-LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD 312
            N + L      + +  G L IT +  AD G Y C A N+ G    +  L V        
Sbjct: 355 KNGEPLDHMEDRLQVNNGVLNITSLNLADIGMYQCVAENRHGRVFTNAELRVVAIAPDFS 414

Query: 313 Q---PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
           Q           G      C     P  +  I W +G E +      R    ++ SL ++
Sbjct: 415 QNLLKAQTLARQGGDVLIECKPRMSP--RGIISWRKGKEAL--RENHRVTVLDNGSLRIS 470

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQ 429
             + LD G YTC A+ +     +  +L V+ P    S    + V   +  V+        
Sbjct: 471 NVTRLDDGLYTCVARNQFGVASSAGSLLVKEPTAITSPAGHLDVTVGESIVLPCQVSHDP 530

Query: 430 SLRGHFRGY----------------KVQTWTEK-DGEGSIRELIVNKGESTTTEVDKFVP 472
           +L   F  +                KV   +E+  G+  IR +        T  V   V 
Sbjct: 531 TLELKFTWFFNEQLIHFGNLWAFFEKVGGVSERSSGDIMIRNIQPKHAGKYTCAVQTKVD 590

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
           +       +A +    GPP          G PG  + + A+   +++  + W        
Sbjct: 591 SVS-----IATDVVVRGPP----------GPPGDCR-VTAVTENTAS--VSWAPGADNYS 632

Query: 533 VLMGYKIKYQS--VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGD 590
            ++ Y I+ ++    G +    +  +P +      SA +  L P  +Y   +      G 
Sbjct: 633 PILSYAIQARTPFFLGWQA---VNTVPKLLGGKQLSATVIDLNPWVEYEFRVLATNSIGT 689

Query: 591 GAESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           G  S+           P   P  V G G   + LVI+W  +PE   +   F Y + +R  
Sbjct: 690 GEPSRPSKKARTRETPPRVTPARVNGGGGGHSELVITWEPVPEELQSGSGFGYVVAFRPL 749

Query: 645 NTGEAWNQDDVLDWRQSELVLANQ--PTFQPYEIKV 678
              + W Q  V     S  V  N+  P F PY++KV
Sbjct: 750 G-AQGWMQAAVTSPEASRYVFKNESIPPFSPYQVKV 784



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 110/292 (37%), Gaps = 38/292 (13%)

Query: 121 SVLAAPYFTVEPEFI-----NAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           +V   P FT +P  +     +    + V F C+A G P P   W  N   I   P +   
Sbjct: 21  AVQLGPVFTKQPGSVVFPLQHGENRKEVVFSCEAQGHPPPFYRWKLNDSFIHPRPGSRYS 80

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            VG N + I  L K  D G Y C  +NS G +        +A+  +     ++   V +G
Sbjct: 81  LVGGN-LHISRLNKDEDVGIYQCLGSNSFGTIVSREASLHVAYLEDFKTHRRNPVRVREG 139

Query: 234 KTVVLTCRVFGAPKPE----VNWIHNQK----ELTGGRYTILETGDLKITDVAFADSGEY 285
           + VVL C   G P         WI N+          R+   +TG+L I  V  +D G Y
Sbjct: 140 QGVVLLC---GPPSHSGELTFKWIFNEYPSFVTQDTRRFVSQKTGNLYIAKVDPSDVGNY 196

Query: 286 TCFARNKL--GTAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSD 334
           TC   N +   + QG  +  V     +  +         PE   V    +    C A+ +
Sbjct: 197 TCVVTNTVTKSSVQGPPTPLVLRVDGVMGEYEPKIEVQFPEVVPVAKSSTVKLECFALGN 256

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYS--LTVTKSSELDSGQYTCRAQ 384
           P   +S  W R        S  R V  N  S  L +      D+G Y C A+
Sbjct: 257 PVPTIS--WRREGG----ASFGRKVDVNKASGVLEIPYFQMEDAGVYECVAE 302



 Score = 42.7 bits (99), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 43/199 (21%), Positives = 84/199 (42%), Gaps = 15/199 (7%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P  AP      + + A +  V+W P++  + R    GY++Q W+E+  +     +I   G
Sbjct: 808 PSRAPGRLR-ARSVSASEVEVTWKPLAWSNRR--ILGYELQYWSERQ-KPDTASVIRTVG 863

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
             T+  +         +  + A+N A  GP S  ++  T +  P            +S  
Sbjct: 864 NKTSVLIRDLEGRCTYYVSLRAYNSAGVGPQSNTVNVTTKKPPPSQAPGKIMWNTSNSKV 923

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            L+W  V   +    + GYK+ Y   K ++        P + +  +TS +L+ L  +  Y
Sbjct: 924 ILRWDQVHALENESEVTGYKVMYSQDKHSR--------PSVVETNSTSLELS-LPVNQDY 974

Query: 579 RIHLAGYTKAGDGAESKYL 597
            I +  +++ G+G  S+ +
Sbjct: 975 VIQIKPFSEGGEGRSSRQI 993


>gi|402859569|ref|XP_003894225.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 1
           [Papio anubis]
          Length = 1209

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 180/713 (25%), Positives = 293/713 (41%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 253 LKGETLLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYGKTLKIENVSYQDKGNYRCT 311

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG P
Sbjct: 312 ASNFLGTA-THDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 370

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           I   P      V P  I+  NL+ + T  Y C A+N  G +     V+V+   P I    
Sbjct: 371 IDNHP-FAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILASANVDVVDVRPLIQTKD 429

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            + Y TV G +  L C  F +P+  V+W  +   K L G RY + + G L+I      D+
Sbjct: 430 GENYATVVGYSAFLHCEFFASPEAVVSWQKVEEAKPLEGRRYHVYDNGTLQINRTTEEDA 489

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L 
Sbjct: 490 GSYSCWVENAIGKTAVTANLDIRNATQLRVSPKNPRIPKLHMLELHCESKCDLHLKHSLK 549

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y C A T LD       +TV 
Sbjct: 550 LSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVL 609

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   +SW   +      +   Y V+    K+  G   EL   +
Sbjct: 610 DVPDPPENLHLSERQN-RSVRLSWE--AGDDHNSNISEYIVEFEGNKEDPGRWEELTRVQ 666

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 667 GKKTTV-ILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 725

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 726 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 776

Query: 576 T--KYRIHLAGYTKAGDG-AESKYLFYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G A      Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 777 VYAPYDVKVQAINQLGSGPAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKD 836

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ V++        
Sbjct: 837 RVHGRLKGYQINW--------WKTKSLLDGRT-----------HPKEVNVLRF------- 870

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 871 ---------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTPEG 914



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 128/567 (22%), Positives = 230/567 (40%), Gaps = 54/567 (9%)

Query: 135 INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSD 191
           I   + ET+  EC A GLP P++ W   G  + +      R+   N    + IEN+   D
Sbjct: 250 ITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKG-----RETKENYGKTLKIENVSYQD 304

Query: 192 TGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVN 251
            GNY C A+N LG    D +V ++   P  T+ P+      G   +L C   G P+P + 
Sbjct: 305 KGNYRCTASNFLGTATHDFHV-IVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIK 363

Query: 252 WIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH 309
           W  N   +    +   ++   ++  T++    +  Y C A N  GT   S ++ V +   
Sbjct: 364 WRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILASANVDVVDVRP 423

Query: 310 I--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
           +  T   E+Y    G SA   C   + P   +S  W +  E    E   R+   ++ +L 
Sbjct: 424 LIQTKDGENYATVVGYSAFLHCEFFASPEAVVS--WQKVEEAKPLEGR-RYHVYDNGTLQ 480

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWN 424
           + +++E D+G Y+C  +  +      A L ++   +   +P N  +      K  ++  +
Sbjct: 481 INRTTEEDAGSYSCWVENAIGKTAVTANLDIRNATQLRVSPKNPRI-----PKLHMLELH 535

Query: 425 PVSPQSLRGHFRGYKVQTWTEKDGEG------SIRELIVNKGESTTTEVDKFVPASKNFA 478
             S   L  H +     +W+ KDGE           +I++    T + V          +
Sbjct: 536 CESKCDL--HLKHSLKLSWS-KDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCS 592

Query: 479 RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
            + A + A +      I+ VT   VP   ++L      + +  L W   +  N  +  Y 
Sbjct: 593 ALTALDSAAD------ITQVTVLDVPDPPENLHLSERQNRSVRLSWEAGDDHNSNISEYI 646

Query: 539 IKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL 597
           ++++   G K  P   E L  +    TT   +  L P  +Y+  +    + G    S+  
Sbjct: 647 VEFE---GNKEDPGRWEELTRVQGKKTTV--ILPLAPFVRYQFRVIAVNEVGRSQPSQPS 701

Query: 598 FY------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWN 651
            +       P +NP N+  + S P  ++I W  +  +E N P  +YR+ W+       W 
Sbjct: 702 DHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWE 761

Query: 652 QDDVLDWRQSELVLANQPTFQPYEIKV 678
           ++ V +     L +     + PY++KV
Sbjct: 762 EETVTN---HTLRVMTPAVYAPYDVKV 785



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 132/577 (22%), Positives = 228/577 (39%), Gaps = 55/577 (9%)

Query: 53   LFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L C F  +P     W K  +  P+    R    + G +L I      D GSY+C V N +
Sbjct: 443  LHCEFFASPEAVVSWQKVEEAKPLE-GRRYHVYDNG-TLQINRTTEEDAGSYSCWVENAI 500

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--------WVHN 162
            G+  + + +L +  A    V P+     +   +   C++      ++H        W  +
Sbjct: 501  GKT-AVTANLDIRNATQLRVSPKNPRIPKLHMLELHCESKC----DLHLKHSLKLSWSKD 555

Query: 163  GKPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
            G+        + R  +    +TI N+   D G Y C+A  +L        V VL    ++
Sbjct: 556  GEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVL----DV 611

Query: 222  TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG-----GRYTILETGDLKITD 276
             + P++ +  + +   +            N      E  G     GR+  L     K T 
Sbjct: 612  PDPPENLHLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEDPGRWEELTRVQGKKTT 671

Query: 277  VAFADSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSAT---- 326
            V    +     ++   A N++G +Q S      E         P++  V+A Q       
Sbjct: 672  VILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIK 731

Query: 327  ---FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
                +    + P L+  + W     P+++E E       +++L V   +         +A
Sbjct: 732  WEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TVTNHTLRVMTPAVYAPYDVKVQA 787

Query: 384  QTELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
              +L    A  ++T+    + P    +I    VI++    V+W+ +    + G  +GY++
Sbjct: 788  INQLGSGPAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQI 847

Query: 441  QTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
              W  K   DG    +E+ V +  G+  +  V      S+    VLA+N    GP SE  
Sbjct: 848  NWWKTKSLLDGRTHPKEVNVLRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPY 907

Query: 496  SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE 554
             F TPEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T ++G L +
Sbjct: 908  IFQTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGNLTGYLLQYQIINDTYEIGELND 967

Query: 555  RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
                I+ P+  S  L+ L  +TKY+ +L   T  G G
Sbjct: 968  I--NITTPSKPSWHLSNLNATTKYKFYLRACTSRGCG 1002



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 115/461 (24%), Positives = 192/461 (41%), Gaps = 53/461 (11%)

Query: 12  GNRILLNVIATGISASQNRHAPK--QQYVTRKKEVALR-----NKKVELFCIFGGTPLPQ 64
           G R+++++I   +  S     P   QQ  T  K+  ++     ++  ++ C   G P P 
Sbjct: 7   GRRLIISLIFFLLKFSTAIEIPPSVQQVPTIIKQSKVQVAFPFDEYFQIECEAKGNPEPT 66

Query: 65  TIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSNGVGEAKSYSIDLS 121
             W+KDG P   +D   I+  N G   I      S  QG Y C  SN +G A S  I+  
Sbjct: 67  FTWTKDGNPFYFTDHRIITSNNSGTFRIPNEGHISHFQGKYRCFASNKLGIAMSEEIEFI 126

Query: 122 VLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKPISQAPPNPRRKVG 178
           V + P F  E  + +   E + +   C    GLP   I+W++   + I Q       + G
Sbjct: 127 VPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEHIEQDERVYMSQKG 186

Query: 179 PNRITIENLRKSDTGN-YGCNAT-NSLGYVYKDVYVNVLAHA--------PEITEAPKDE 228
              +   N+ + D+ N Y C A    L  + + + + +  ++        P++   P + 
Sbjct: 187 --DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNSIKQRKPKLLLPPTES 244

Query: 229 YT------VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD-LKITDVAFAD 281
            +      + G+T++L C   G P P+V+W     +L  GR T    G  LKI +V++ D
Sbjct: 245 GSESSITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQD 304

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G Y C A N LGTA     + V+E    T +P+      G +    C A  +P  + +I
Sbjct: 305 KGNYRCTASNFLGTATHDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEP--QPTI 362

Query: 342 VWLRGSEPID---------FESEPRF--VQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
            W     PID         F  E  F  +Q N  ++   ++S +     T  A   +D +
Sbjct: 363 KWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHG---TILASANVDVV 419

Query: 391 EAQATLTVQ-----VPLEAPSNFTLIQVIDAKKAVVSWNPV 426
           + +  +  +       +   S F   +   + +AVVSW  V
Sbjct: 420 DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV 460


>gi|397522461|ref|XP_003831285.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
           [Pan paniscus]
          Length = 1225

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 176/713 (24%), Positives = 297/713 (41%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 269 LKGEILLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYGKTLKIENVSYQDKGNYRCT 327

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG P
Sbjct: 328 ASNFLGTA-THDFHVIVEEPPRWTKQPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 386

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +   P      V P  I+  NL+ + T  Y C A+N  G +  +  ++V+   P I    
Sbjct: 387 VDNHP-FAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQTKD 445

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            + Y TV G +  L C  F +P+  V+W  +   K L G RY I E G L+I      D+
Sbjct: 446 GENYATVVGYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDA 505

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L 
Sbjct: 506 GSYSCWVENAIGKTAVTANLDIRNATKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLK 565

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y C A T LD       +TV 
Sbjct: 566 LSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVL 625

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +  +   +   Y V+    K+  G   EL   +
Sbjct: 626 DVPDPPENLHLSERQN-RSVRLTWEAGADHN--SNISEYIVEFEGNKEEPGRWEELTRVQ 682

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 683 GKKTTV-ILPLAPFVRYQFRVIAVNEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQP 741

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 742 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 792

Query: 576 T--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G + + +  Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 793 VYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKD 852

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y++ W        W    +LD R             P E+ +++        
Sbjct: 853 RVHGRLKGYQVNW--------WKTKSLLDGRT-----------HPKEVNILRF------- 886

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 887 ---------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTPEG 930



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 140/651 (21%), Positives = 249/651 (38%), Gaps = 77/651 (11%)

Query: 54  FCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113
           +C F   P  +TI  K  +P+              L +  ++ ++  S + E+ +     
Sbjct: 202 YCCFAAFPRLRTIVQK--MPMK-------------LTVNSLKHANDSSSSTEIGSKANSI 246

Query: 114 KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           K     L  L  P  +     I   + E +  EC A GLP P++ W   G  + +     
Sbjct: 247 KQRKPKL--LLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKG---- 300

Query: 174 RRKVGPN---RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
            R+   N    + IEN+   D GNY C A+N LG    D +V ++   P  T+ P+    
Sbjct: 301 -RETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHV-IVEEPPRWTKQPQSAVY 358

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCF 288
             G   +L C   G P+P + W  N   +    +   ++   ++  T++    +  Y C 
Sbjct: 359 STGSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCE 418

Query: 289 ARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           A N  GT   + ++ V +   +  T   E+Y    G SA   C   + P   +S  W + 
Sbjct: 419 ASNVHGTILANANIDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS--WQKV 476

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPS 406
            E    E     +  N  +L + +++E D+G Y+C  +  +      A L ++       
Sbjct: 477 EEVKPLEGRRYHIYENG-TLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR------- 528

Query: 407 NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGES---T 463
                   +A K  VS  P +P+  + H      ++  +   + S++      GE+    
Sbjct: 529 --------NATKLRVS--PKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDGEAFEIN 578

Query: 464 TTEVDKFVPASKNFA---RVLAFNGAYNGPP------SEIISFVTPEGVPGTVQSLEAIP 514
            TE  + +    N       L   G Y          +  I+ VT   VP   ++L    
Sbjct: 579 GTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSE 638

Query: 515 LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLE 573
             + +  L W      N  +  Y ++++   G K  P   E L  +    TT   +  L 
Sbjct: 639 RQNRSVRLTWEAGADHNSNISEYIVEFE---GNKEEPGRWEELTRVQGKKTTV--ILPLA 693

Query: 574 PSTKYRIHLAGYTKAGDGAESKYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPE 627
           P  +Y+  +    + G    S+           P +NP N+  + S P  ++I W  +  
Sbjct: 694 PFVRYQFRVIAVNEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKS 753

Query: 628 IEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           +E N P  +YR+ W+       W ++ V +     L +     + PY++KV
Sbjct: 754 MEQNGPGLEYRVTWKPQGAPVEWEEETVTN---HTLRVMTPAVYAPYDVKV 801



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 128/539 (23%), Positives = 223/539 (41%), Gaps = 49/539 (9%)

Query: 88   SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
            +L I      D GSY+C V N +G+  + + +L +  A    V P+     +   +   C
Sbjct: 494  TLQINRTTEEDAGSYSCWVENAIGKT-AVTANLDIRNATKLRVSPKNPRIPKLHMLELHC 552

Query: 148  KA---SGLPEP-EIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202
            ++   S L    ++ W  +G+        + R  +    +TI N+   D G Y C+A  +
Sbjct: 553  ESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTA 612

Query: 203  LGYVYKDVYVNVLAHAPEITEAPKDEYTVD--GKTVVLTCRVFGAPKPE------VNWIH 254
            L        V VL    ++ + P++ +  +   ++V LT    GA          V +  
Sbjct: 613  LDSAADITQVTVL----DVPDPPENLHLSERQNRSVRLTWEA-GADHNSNISEYIVEFEG 667

Query: 255  NQKELTGGRYTILETGDLKITDVAFADSG----EYTCFARNKLGTAQGSGSLTVKEHTHI 310
            N++E   GR+  L     K T V    +     ++   A N++G +Q S      E    
Sbjct: 668  NKEE--PGRWEELTRVQGKKTTVILPLAPFVRYQFRVIAVNEVGRSQPSQPSDRHETPPA 725

Query: 311  T--DQPEDYEVEAGQSAT-------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS 361
                 P++  V+A Q           +    + P L+  + W     P+++E E      
Sbjct: 726  APDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TV 781

Query: 362  NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKK 418
             +++L V   +         +A  +L       ++T+    + P    +I    VI++  
Sbjct: 782  TNHTLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTL 841

Query: 419  AVVSWNPVSPQSLRGHFRGYKVQTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPA 473
              V+W+ +    + G  +GY+V  W  K   DG    +E+ + +  G+  +  V      
Sbjct: 842  VKVTWSTIPKDRVHGRLKGYQVNWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAF 901

Query: 474  SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV 533
            S+    VLA+N    GP SE   F TPEGVP     L+ I +      L W  P++ NG 
Sbjct: 902  SEFHLTVLAYNSKGAGPESEPYIFQTPEGVPEQPTFLKVIKVDKDTATLSWGVPKKLNGN 961

Query: 534  LMGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            L GY ++YQ +  T ++G L +    I+ P+  S  L+ L  +TKY+ +L   T  G G
Sbjct: 962  LTGYLLQYQIINDTYEIGELNDI--NITTPSKPSWHLSNLNATTKYKFYLRACTSQGCG 1018



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 171/430 (39%), Gaps = 62/430 (14%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P   W+KDG P   +D   ++  N G   I      S  QG Y C  SN
Sbjct: 54  QIECEAKGNPEPTFSWTKDGNPFYFTDHRIMTSNNSGTFRIPNEGHISHFQGKYRCFASN 113

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKP 165
            +G A S  I+  V + P F  E  + +   E + +   C    GLP   I+W++   + 
Sbjct: 114 KLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEH 173

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA- 218
           I Q       + G   +   N+ + D+ N Y C A        +  +   + VN L HA 
Sbjct: 174 IEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHAN 231

Query: 219 -------------------PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWI 253
                              P++   P +  +      + G+ ++L C   G P P+V+W 
Sbjct: 232 DSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWN 291

Query: 254 HNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD 312
               +L  GR T    G  LKI +V++ D G Y C A N LGTA     + V+E    T 
Sbjct: 292 KIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTK 351

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID---------FESEPRF--VQS 361
           QP+      G +    C A  +P  + +I W     P+D         F  E  F  +Q 
Sbjct: 352 QPQSAVYSTGSNGILLCEAEGEP--QPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQP 409

Query: 362 NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDA 416
           N  ++   ++S +     T  A   +D ++ +  +  +       +   S F   +   +
Sbjct: 410 NHTAVYQCEASNVHG---TILANANIDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFAS 466

Query: 417 KKAVVSWNPV 426
            +AVVSW  V
Sbjct: 467 PEAVVSWQKV 476



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 21/244 (8%)

Query: 86  GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTF 145
           G+ LI+  + F  + S   E+ + V +A +      V  A  F           +E    
Sbjct: 7   GRGLIVSLIFFLLKFSKAIEIPSSVQQAPTIIKQSKVQVAFPF-----------DEYFQI 55

Query: 146 ECKASGLPEPEIHWVHNGKP--ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSL 203
           EC+A G PEP   W  +G P   +          G  RI  E       G Y C A+N L
Sbjct: 56  ECEAKGNPEPTFSWTKDGNPFYFTDHRIMTSNNSGTFRIPNEGHISHFQGKYRCFASNKL 115

Query: 204 GYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHNQKELT- 260
           G    +    ++   P+  +   D   V +G  +VL C    G P   + W++ + E   
Sbjct: 116 GIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEHIE 175

Query: 261 -GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTHITDQPE 315
              R  + + GDL   +V   DS  +Y CFA   R +    +    LTV    H  D   
Sbjct: 176 QDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHANDSSS 235

Query: 316 DYEV 319
             E+
Sbjct: 236 STEI 239


>gi|397522459|ref|XP_003831284.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 1
           [Pan paniscus]
          Length = 1209

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 176/713 (24%), Positives = 297/713 (41%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 253 LKGEILLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYGKTLKIENVSYQDKGNYRCT 311

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG P
Sbjct: 312 ASNFLGTA-THDFHVIVEEPPRWTKQPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 370

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +   P      V P  I+  NL+ + T  Y C A+N  G +  +  ++V+   P I    
Sbjct: 371 VDNHP-FAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQTKD 429

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            + Y TV G +  L C  F +P+  V+W  +   K L G RY I E G L+I      D+
Sbjct: 430 GENYATVVGYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDA 489

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L 
Sbjct: 490 GSYSCWVENAIGKTAVTANLDIRNATKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLK 549

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y C A T LD       +TV 
Sbjct: 550 LSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVL 609

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +  +   +   Y V+    K+  G   EL   +
Sbjct: 610 DVPDPPENLHLSERQN-RSVRLTWEAGADHN--SNISEYIVEFEGNKEEPGRWEELTRVQ 666

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 667 GKKTTV-ILPLAPFVRYQFRVIAVNEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQP 725

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 726 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 776

Query: 576 T--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G + + +  Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 777 VYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKD 836

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y++ W        W    +LD R             P E+ +++        
Sbjct: 837 RVHGRLKGYQVNW--------WKTKSLLDGRT-----------HPKEVNILRF------- 870

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 871 ---------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTPEG 914



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 128/539 (23%), Positives = 223/539 (41%), Gaps = 49/539 (9%)

Query: 88   SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
            +L I      D GSY+C V N +G+  + + +L +  A    V P+     +   +   C
Sbjct: 478  TLQINRTTEEDAGSYSCWVENAIGKT-AVTANLDIRNATKLRVSPKNPRIPKLHMLELHC 536

Query: 148  KA---SGLPEP-EIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202
            ++   S L    ++ W  +G+        + R  +    +TI N+   D G Y C+A  +
Sbjct: 537  ESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTA 596

Query: 203  LGYVYKDVYVNVLAHAPEITEAPKDEYTVD--GKTVVLTCRVFGAPKPE------VNWIH 254
            L        V VL    ++ + P++ +  +   ++V LT    GA          V +  
Sbjct: 597  LDSAADITQVTVL----DVPDPPENLHLSERQNRSVRLTWEA-GADHNSNISEYIVEFEG 651

Query: 255  NQKELTGGRYTILETGDLKITDVAFADSG----EYTCFARNKLGTAQGSGSLTVKEHTHI 310
            N++E   GR+  L     K T V    +     ++   A N++G +Q S      E    
Sbjct: 652  NKEE--PGRWEELTRVQGKKTTVILPLAPFVRYQFRVIAVNEVGRSQPSQPSDRHETPPA 709

Query: 311  T--DQPEDYEVEAGQSAT-------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS 361
                 P++  V+A Q           +    + P L+  + W     P+++E E      
Sbjct: 710  APDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TV 765

Query: 362  NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKK 418
             +++L V   +         +A  +L       ++T+    + P    +I    VI++  
Sbjct: 766  TNHTLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTL 825

Query: 419  AVVSWNPVSPQSLRGHFRGYKVQTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPA 473
              V+W+ +    + G  +GY+V  W  K   DG    +E+ + +  G+  +  V      
Sbjct: 826  VKVTWSTIPKDRVHGRLKGYQVNWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAF 885

Query: 474  SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV 533
            S+    VLA+N    GP SE   F TPEGVP     L+ I +      L W  P++ NG 
Sbjct: 886  SEFHLTVLAYNSKGAGPESEPYIFQTPEGVPEQPTFLKVIKVDKDTATLSWGVPKKLNGN 945

Query: 534  LMGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            L GY ++YQ +  T ++G L +    I+ P+  S  L+ L  +TKY+ +L   T  G G
Sbjct: 946  LTGYLLQYQIINDTYEIGELNDI--NITTPSKPSWHLSNLNATTKYKFYLRACTSQGCG 1002



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 104/414 (25%), Positives = 171/414 (41%), Gaps = 46/414 (11%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P   W+KDG P   +D   ++  N G   I      S  QG Y C  SN
Sbjct: 54  QIECEAKGNPEPTFSWTKDGNPFYFTDHRIMTSNNSGTFRIPNEGHISHFQGKYRCFASN 113

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKP 165
            +G A S  I+  V + P F  E  + +   E + +   C    GLP   I+W++   + 
Sbjct: 114 KLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEH 173

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-NSLGYVYKDVYVNVLAHA----- 218
           I Q       + G   +   N+ + D+ N Y C A    L  + + + + +  ++     
Sbjct: 174 IEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNSIK 231

Query: 219 ---PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILET 269
              P++   P +  +      + G+ ++L C   G P P+V+W     +L  GR T    
Sbjct: 232 QRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKGRETKENY 291

Query: 270 GD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           G  LKI +V++ D G Y C A N LGTA     + V+E    T QP+      G +    
Sbjct: 292 GKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKQPQSAVYSTGSNGILL 351

Query: 329 CNAVSDPSLKLSIVWLRGSEPID---------FESEPRF--VQSNDYSLTVTKSSELDSG 377
           C A  +P  + +I W     P+D         F  E  F  +Q N  ++   ++S +   
Sbjct: 352 CEAEGEP--QPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHG- 408

Query: 378 QYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDAKKAVVSWNPV 426
             T  A   +D ++ +  +  +       +   S F   +   + +AVVSW  V
Sbjct: 409 --TILANANIDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV 460



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 129/347 (37%), Gaps = 42/347 (12%)

Query: 86  GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTF 145
           G+ LI+  + F  + S   E+ + V +A +      V  A  F           +E    
Sbjct: 7   GRGLIVSLIFFLLKFSKAIEIPSSVQQAPTIIKQSKVQVAFPF-----------DEYFQI 55

Query: 146 ECKASGLPEPEIHWVHNGKP--ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSL 203
           EC+A G PEP   W  +G P   +          G  RI  E       G Y C A+N L
Sbjct: 56  ECEAKGNPEPTFSWTKDGNPFYFTDHRIMTSNNSGTFRIPNEGHISHFQGKYRCFASNKL 115

Query: 204 GYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHNQKELT- 260
           G    +    ++   P+  +   D   V +G  +VL C    G P   + W++ + E   
Sbjct: 116 GIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEHIE 175

Query: 261 -GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTHITDQ-- 313
              R  + + GDL   +V   DS  +Y CFA   R +    +    LTV     I  +  
Sbjct: 176 QDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNSIKQRKP 235

Query: 314 -----PEDYEVEA------GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
                P +   E+      G+     C A   P+ ++    + G  P   E++  + +  
Sbjct: 236 KLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGK-- 293

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFT 409
             +L +   S  D G Y C A   L      AT    V +E P  +T
Sbjct: 294 --TLKIENVSYQDKGNYRCTASNFL----GTATHDFHVIVEEPPRWT 334


>gi|426339214|ref|XP_004033553.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
           [Gorilla gorilla gorilla]
          Length = 1225

 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 177/713 (24%), Positives = 296/713 (41%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 269 LKGEILLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYGKTLKIENVSYQDKGNYRCT 327

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG P
Sbjct: 328 ASNFLGTA-THDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 386

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +    P     V P  I+  NL+ + T  Y C A+N  G +  +  ++V+   P I    
Sbjct: 387 VDNH-PFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQTKD 445

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            + Y TV G +  L C  F +P+  V+W  +   K L G RY I E G L+I      D+
Sbjct: 446 GENYATVVGYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDA 505

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L 
Sbjct: 506 GSYSCWVENAIGKTAVTANLDIRNATKLRVSPKNPRIPKSHMLELHCESKCDSHLKHSLK 565

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y C A T LD       +TV 
Sbjct: 566 LSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVL 625

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +  +       Y V+    K+  G   EL   +
Sbjct: 626 DVPDPPENLHLSERQN-RSVRLTWEAGADHN--SDISEYIVEFEGNKEEPGRWDELTRVQ 682

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 683 GKKTTV-ILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 741

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 742 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 792

Query: 576 T--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G + + +  Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 793 VYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKD 852

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ +++        
Sbjct: 853 RVHGRLKGYQINW--------WKTKSLLDGRT-----------HPKEVNILRF------- 886

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 887 ---------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTPEG 930



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 139/651 (21%), Positives = 250/651 (38%), Gaps = 77/651 (11%)

Query: 54  FCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113
           +C F   P  +TI  K  +P+              L +  ++ ++  S + E+ +     
Sbjct: 202 YCCFAAFPRLRTIVQK--MPMK-------------LTVNSLKHANDSSSSTEIGSKANSI 246

Query: 114 KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           K     L  L  P  +     I   + E +  EC A GLP P++ W   G  + +     
Sbjct: 247 KQRKPKL--LLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKG---- 300

Query: 174 RRKVGPN---RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
            R+   N    + IEN+   D GNY C A+N LG    D +V ++   P  T+ P+    
Sbjct: 301 -RETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHV-IVEEPPRWTKKPQSAVY 358

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCF 288
             G   +L C   G P+P + W  N   +    +   ++   ++  T++    +  Y C 
Sbjct: 359 STGSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCE 418

Query: 289 ARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           A N  GT   + ++ V +   +  T   E+Y    G SA   C   + P   +S  W + 
Sbjct: 419 ASNVHGTILANANIDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS--WQKV 476

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPS 406
            E    E     +  N  +L + +++E D+G Y+C  +  +      A L ++       
Sbjct: 477 EEVKPLEGRRYHIYENG-TLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR------- 528

Query: 407 NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGES---T 463
                   +A K  VS  P +P+  + H      ++  +   + S++      GE+    
Sbjct: 529 --------NATKLRVS--PKNPRIPKSHMLELHCESKCDSHLKHSLKLSWSKDGEAFEIN 578

Query: 464 TTEVDKFVPASKNFA---RVLAFNGAYNGPP------SEIISFVTPEGVPGTVQSLEAIP 514
            TE  + +    N       L   G Y          +  I+ VT   VP   ++L    
Sbjct: 579 GTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSE 638

Query: 515 LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLE 573
             + +  L W      N  +  Y ++++   G K  P   + L  +    TT   +  L 
Sbjct: 639 RQNRSVRLTWEAGADHNSDISEYIVEFE---GNKEEPGRWDELTRVQGKKTTV--ILPLA 693

Query: 574 PSTKYRIHLAGYTKAGDGAESKYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPE 627
           P  +Y+  +    + G    S+   +       P +NP N+  + S P  ++I W  +  
Sbjct: 694 PFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKS 753

Query: 628 IEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           +E N P  +YR+ W+       W ++ V +     L +     + PY++KV
Sbjct: 754 MEQNGPGLEYRVTWKPQGAPVEWEEETVTN---HTLRVMTPAVYAPYDVKV 801



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 126/538 (23%), Positives = 222/538 (41%), Gaps = 47/538 (8%)

Query: 88   SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
            +L I      D GSY+C V N +G+  + + +L +  A    V P+     +   +   C
Sbjct: 494  TLQINRTTEEDAGSYSCWVENAIGKT-AVTANLDIRNATKLRVSPKNPRIPKSHMLELHC 552

Query: 148  KA---SGLPEP-EIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202
            ++   S L    ++ W  +G+        + R  +    +TI N+   D G Y C+A  +
Sbjct: 553  ESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTA 612

Query: 203  LGYVYKDVYVNVLAHAPEITEAPKDEYTVD--GKTVVLTCRVFGAPKPE-----VNWIHN 255
            L        V VL    ++ + P++ +  +   ++V LT         +     V +  N
Sbjct: 613  LDSAADITQVTVL----DVPDPPENLHLSERQNRSVRLTWEAGADHNSDISEYIVEFEGN 668

Query: 256  QKELTGGRYTILETGDLKITDVAFADSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT 311
            ++E   GR+  L     K T V    +     ++   A N++G +Q S      E     
Sbjct: 669  KEE--PGRWDELTRVQGKKTTVILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAA 726

Query: 312  --DQPEDYEVEAGQSAT-------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
                P++  V+A Q           +    + P L+  + W     P+++E E       
Sbjct: 727  PDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TVT 782

Query: 363  DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKA 419
            +++L V   +         +A  +L       ++T+    + P    +I    VI++   
Sbjct: 783  NHTLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLV 842

Query: 420  VVSWNPVSPQSLRGHFRGYKVQTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPAS 474
             V+W+ V    + G  +GY++  W  K   DG    +E+ + +  G+  +  V      S
Sbjct: 843  KVTWSTVPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFS 902

Query: 475  KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
            +    VLA+N    GP SE   F TPEGVP     L+ I +      L W  P++ NG L
Sbjct: 903  EFHLTVLAYNSKGAGPESEPYIFQTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGNL 962

Query: 535  MGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             GY ++YQ +  T ++G L +    I+ P+  S  L+ L  +TKY+ +L   T  G G
Sbjct: 963  TGYLLQYQIINDTYEIGELNDI--NITTPSKPSWHLSNLNATTKYKFYLRACTSQGCG 1018



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 109/430 (25%), Positives = 171/430 (39%), Gaps = 62/430 (14%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P   W+KDG P   +D   I+  N G   I      S  QG Y C  SN
Sbjct: 54  QIECEAKGNPEPTFSWTKDGNPFYFTDHRIITSNNSGTFRIPNEGHISHFQGKYRCFASN 113

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKP 165
            +G A S  I+  V + P F  E  + +   E + V   C    GLP   I+W++   + 
Sbjct: 114 KLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPVVLPCNPPKGLPPLHIYWMNIELEH 173

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA- 218
           I Q       + G   +   N+ + D+ N Y C A        +  +   + VN L HA 
Sbjct: 174 IEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHAN 231

Query: 219 -------------------PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWI 253
                              P++   P +  +      + G+ ++L C   G P P+V+W 
Sbjct: 232 DSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWN 291

Query: 254 HNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD 312
               +L  GR T    G  LKI +V++ D G Y C A N LGTA     + V+E    T 
Sbjct: 292 KIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTK 351

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID---------FESEPRF--VQS 361
           +P+      G +    C A  +P  + +I W     P+D         F  E  F  +Q 
Sbjct: 352 KPQSAVYSTGSNGILLCEAEGEP--QPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQP 409

Query: 362 NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDA 416
           N  ++   ++S +     T  A   +D ++ +  +  +       +   S F   +   +
Sbjct: 410 NHTAVYQCEASNVHG---TILANANIDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFAS 466

Query: 417 KKAVVSWNPV 426
            +AVVSW  V
Sbjct: 467 PEAVVSWQKV 476



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 92/244 (37%), Gaps = 21/244 (8%)

Query: 86  GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTF 145
           G+ LI+  + F  + S   E+ + V +  +      V  A  F           +E    
Sbjct: 7   GRGLIVSLIFFLLKFSKAIEIPSSVQQVPTIIKQSKVQVAFPF-----------DEYFQI 55

Query: 146 ECKASGLPEPEIHWVHNGKP--ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSL 203
           EC+A G PEP   W  +G P   +          G  RI  E       G Y C A+N L
Sbjct: 56  ECEAKGNPEPTFSWTKDGNPFYFTDHRIITSNNSGTFRIPNEGHISHFQGKYRCFASNKL 115

Query: 204 GYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHNQKELT- 260
           G    +    ++   P+  +   D   V +G  VVL C    G P   + W++ + E   
Sbjct: 116 GIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPVVLPCNPPKGLPPLHIYWMNIELEHIE 175

Query: 261 -GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTHITDQPE 315
              R  + + GDL   +V   DS  +Y CFA   R +    +    LTV    H  D   
Sbjct: 176 QDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHANDSSS 235

Query: 316 DYEV 319
             E+
Sbjct: 236 STEI 239


>gi|426339212|ref|XP_004033552.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 1
           [Gorilla gorilla gorilla]
          Length = 1209

 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 177/713 (24%), Positives = 296/713 (41%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 253 LKGEILLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYGKTLKIENVSYQDKGNYRCT 311

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG P
Sbjct: 312 ASNFLGTA-THDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 370

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +    P     V P  I+  NL+ + T  Y C A+N  G +  +  ++V+   P I    
Sbjct: 371 VDNH-PFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQTKD 429

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            + Y TV G +  L C  F +P+  V+W  +   K L G RY I E G L+I      D+
Sbjct: 430 GENYATVVGYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDA 489

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L 
Sbjct: 490 GSYSCWVENAIGKTAVTANLDIRNATKLRVSPKNPRIPKSHMLELHCESKCDSHLKHSLK 549

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y C A T LD       +TV 
Sbjct: 550 LSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVL 609

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +  +       Y V+    K+  G   EL   +
Sbjct: 610 DVPDPPENLHLSERQN-RSVRLTWEAGADHN--SDISEYIVEFEGNKEEPGRWDELTRVQ 666

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 667 GKKTTV-ILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 725

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 726 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 776

Query: 576 T--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G + + +  Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 777 VYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKD 836

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ +++        
Sbjct: 837 RVHGRLKGYQINW--------WKTKSLLDGRT-----------HPKEVNILRF------- 870

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 871 ---------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTPEG 914



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 126/538 (23%), Positives = 222/538 (41%), Gaps = 47/538 (8%)

Query: 88   SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
            +L I      D GSY+C V N +G+  + + +L +  A    V P+     +   +   C
Sbjct: 478  TLQINRTTEEDAGSYSCWVENAIGKT-AVTANLDIRNATKLRVSPKNPRIPKSHMLELHC 536

Query: 148  KA---SGLPEP-EIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202
            ++   S L    ++ W  +G+        + R  +    +TI N+   D G Y C+A  +
Sbjct: 537  ESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTA 596

Query: 203  LGYVYKDVYVNVLAHAPEITEAPKDEYTVD--GKTVVLTCRVFGAPKPE-----VNWIHN 255
            L        V VL    ++ + P++ +  +   ++V LT         +     V +  N
Sbjct: 597  LDSAADITQVTVL----DVPDPPENLHLSERQNRSVRLTWEAGADHNSDISEYIVEFEGN 652

Query: 256  QKELTGGRYTILETGDLKITDVAFADSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT 311
            ++E   GR+  L     K T V    +     ++   A N++G +Q S      E     
Sbjct: 653  KEE--PGRWDELTRVQGKKTTVILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAA 710

Query: 312  --DQPEDYEVEAGQSAT-------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
                P++  V+A Q           +    + P L+  + W     P+++E E       
Sbjct: 711  PDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TVT 766

Query: 363  DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKA 419
            +++L V   +         +A  +L       ++T+    + P    +I    VI++   
Sbjct: 767  NHTLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLV 826

Query: 420  VVSWNPVSPQSLRGHFRGYKVQTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPAS 474
             V+W+ V    + G  +GY++  W  K   DG    +E+ + +  G+  +  V      S
Sbjct: 827  KVTWSTVPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFS 886

Query: 475  KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
            +    VLA+N    GP SE   F TPEGVP     L+ I +      L W  P++ NG L
Sbjct: 887  EFHLTVLAYNSKGAGPESEPYIFQTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGNL 946

Query: 535  MGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             GY ++YQ +  T ++G L +    I+ P+  S  L+ L  +TKY+ +L   T  G G
Sbjct: 947  TGYLLQYQIINDTYEIGELNDI--NITTPSKPSWHLSNLNATTKYKFYLRACTSQGCG 1002



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 171/414 (41%), Gaps = 46/414 (11%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P   W+KDG P   +D   I+  N G   I      S  QG Y C  SN
Sbjct: 54  QIECEAKGNPEPTFSWTKDGNPFYFTDHRIITSNNSGTFRIPNEGHISHFQGKYRCFASN 113

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKP 165
            +G A S  I+  V + P F  E  + +   E + V   C    GLP   I+W++   + 
Sbjct: 114 KLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPVVLPCNPPKGLPPLHIYWMNIELEH 173

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-NSLGYVYKDVYVNVLAHA----- 218
           I Q       + G   +   N+ + D+ N Y C A    L  + + + + +  ++     
Sbjct: 174 IEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNSIK 231

Query: 219 ---PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILET 269
              P++   P +  +      + G+ ++L C   G P P+V+W     +L  GR T    
Sbjct: 232 QRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKGRETKENY 291

Query: 270 GD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           G  LKI +V++ D G Y C A N LGTA     + V+E    T +P+      G +    
Sbjct: 292 GKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKKPQSAVYSTGSNGILL 351

Query: 329 CNAVSDPSLKLSIVWLRGSEPID---------FESEPRF--VQSNDYSLTVTKSSELDSG 377
           C A  +P  + +I W     P+D         F  E  F  +Q N  ++   ++S +   
Sbjct: 352 CEAEGEP--QPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHG- 408

Query: 378 QYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDAKKAVVSWNPV 426
             T  A   +D ++ +  +  +       +   S F   +   + +AVVSW  V
Sbjct: 409 --TILANANIDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV 460



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 128/347 (36%), Gaps = 42/347 (12%)

Query: 86  GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTF 145
           G+ LI+  + F  + S   E+ + V +  +      V  A  F           +E    
Sbjct: 7   GRGLIVSLIFFLLKFSKAIEIPSSVQQVPTIIKQSKVQVAFPF-----------DEYFQI 55

Query: 146 ECKASGLPEPEIHWVHNGKP--ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSL 203
           EC+A G PEP   W  +G P   +          G  RI  E       G Y C A+N L
Sbjct: 56  ECEAKGNPEPTFSWTKDGNPFYFTDHRIITSNNSGTFRIPNEGHISHFQGKYRCFASNKL 115

Query: 204 GYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHNQKELT- 260
           G    +    ++   P+  +   D   V +G  VVL C    G P   + W++ + E   
Sbjct: 116 GIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPVVLPCNPPKGLPPLHIYWMNIELEHIE 175

Query: 261 -GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTHITDQ-- 313
              R  + + GDL   +V   DS  +Y CFA   R +    +    LTV     I  +  
Sbjct: 176 QDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNSIKQRKP 235

Query: 314 -----PEDYEVEA------GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
                P +   E+      G+     C A   P+ ++    + G  P   E++  + +  
Sbjct: 236 KLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGK-- 293

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFT 409
             +L +   S  D G Y C A   L      AT    V +E P  +T
Sbjct: 294 --TLKIENVSYQDKGNYRCTASNFL----GTATHDFHVIVEEPPRWT 334


>gi|426249271|ref|XP_004018373.1| PREDICTED: contactin-3 [Ovis aries]
          Length = 1028

 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 169/632 (26%), Positives = 273/632 (43%), Gaps = 50/632 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P   S ++    +   L I + +  D GSY 
Sbjct: 239 AAKGSTVKLECFALGNPVPQINWRRSDGLPF--SSKVKLRKFSGVLEIPNFQQEDSGSYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    + +  A E+++ +EC+ASG P+P   W+ NG
Sbjct: 297 CIAENSRGKNVARG-RLTYYAKPHWVQLIKDVELAVEDSLYWECRASGKPKPSYRWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + +       R ++    +TI NL  +D+G + C A N  G VY    + V+A AP+ ++
Sbjct: 356 EALVL---EERIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVMASAPDFSK 412

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
            P  +      G  V L C+   +P+   +W   +  +    R + L  G LKI +V  A
Sbjct: 413 TPMKKLIQVQVGSEVNLDCKPRASPRALSSWKKGEVIVQESERTSFLNDGGLKIVNVTKA 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L   
Sbjct: 473 DAGIYTCIAENQFGKANGTTHLIVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDTI 532

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 533 FTWYFNGALTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADL 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
            V+     P +  + ++ D   A +SW       +PV   S++       G++  T    
Sbjct: 593 IVRGSPGPPESVKVDEITDT-TAQLSWKEGTDNHSPVIAYSVQARTPFSVGWQTAT---- 647

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 648 ----TVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S  +   GS S   + W  V  E  NG   GY + ++ +  T     ++ +    D 
Sbjct: 702 VPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTN---WIQTVVTSPDT 758

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y + +  Y   G+G  S    +F     P   P  V     + + 
Sbjct: 759 PRYVFRNESILPFSLYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTIAPSQVSANSLSSSE 818

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FWRRHNTGE 648
           + +SW A+P    N     Y + +W  +N GE
Sbjct: 819 IEVSWNAIPWKLSNGHLLGYEVRYW--NNGGE 848



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 161/618 (26%), Positives = 242/618 (39%), Gaps = 48/618 (7%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V   +       ++           P   V+ PE + AA
Sbjct: 181 LYIAKVEPSDVGNYTCVVTSAVTNDRVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 240

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P S      + +     + I N ++ D+G+Y C
Sbjct: 241 KGSTVKLECFALGNPVPQINWRRSDGLPFSS---KVKLRKFSGVLEIPNFQQEDSGSYEC 297

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K+V    L +   P   +  KD       ++   CR  G PKP   W+ N
Sbjct: 298 IAENSRG---KNVARGRLTYYAKPHWVQLIKDVELAVEDSLYWECRASGKPKPSYRWLKN 354

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITD 312
            + L       +E G L I+++   DSG + C A NK G    S  L V         T 
Sbjct: 355 GEALVLEERIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVMASAPDFSKTP 414

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
             +  +V+ G      C   + P    S  W +G E I  ESE R    ND  L +   +
Sbjct: 415 MKKLIQVQVGSEVNLDCKPRASPRALSS--WKKG-EVIVQESE-RTSFLNDGGLKIVNVT 470

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQ 429
           + D+G YTC A+ +         L V  P     APSN   + V   +  ++        
Sbjct: 471 KADAGIYTCIAENQFGKANGTTHLIVTEPTRITLAPSN---MDVSVGESVILPCQVQHDP 527

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
            L   F  Y     T+   +GS  E +   G S+   + + +    +   V       + 
Sbjct: 528 LLDTIFTWYFNGALTDFKKDGSHFEKV--GGSSSGDLMIRNIQLKHSGKYVCMVQTGVDS 585

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
             S     V   G PG  +S++   +  +   L W +    +  ++ Y +  Q+     V
Sbjct: 586 VSSAADLIV--RGSPGPPESVKVDEITDTTAQLSWKEGTDNHSPVIAYSV--QARTPFSV 641

Query: 550 G-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPF 602
           G      +P + D  T +A +  L P  +Y   +    K G G  S      +    VP 
Sbjct: 642 GWQTATTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
             P  V G G + + LVI+W  +PE   N   F Y + +R       W Q  V       
Sbjct: 702 VPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTN-WIQTVVTSPDTPR 760

Query: 663 LVLANQPT--FQPYEIKV 678
            V  N+    F  YE+KV
Sbjct: 761 YVFRNESILPFSLYEVKV 778



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 162/728 (22%), Positives = 276/728 (37%), Gaps = 104/728 (14%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  +   +RI   N   +L I ++  +D G + C   N  G   
Sbjct: 339  CRASGKPKPSYRWLKNGEALVLEERIQIEN--GALTISNLNVTDSGMFQCIAENKHGLVY 396

Query: 115  SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
            S S +L V+A AP F+  P  + I       V  +CK    P     W   G+ I Q   
Sbjct: 397  S-SAELKVMASAPDFSKTPMKKLIQVQVGSEVNLDCKPRASPRALSSW-KKGEVIVQESE 454

Query: 172  NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
                 +    + I N+ K+D G Y C A N  G      ++ ++     IT AP +    
Sbjct: 455  R-TSFLNDGGLKIVNVTKADAGIYTCIAENQFGKANGTTHL-IVTEPTRITLAPSNMDVS 512

Query: 232  DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
             G++V+L C+V   P  +    W  N             E  GG      +GDL I ++ 
Sbjct: 513  VGESVILPCQVQHDPLLDTIFTWYFNGALTDFKKDGSHFEKVGGS----SSGDLMIRNIQ 568

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
               SG+Y C  +  + +   +  L V+                G   + + + ++D + +
Sbjct: 569  LKHSGKYVCMVQTGVDSVSSAADLIVRG-------------SPGPPESVKVDEITDTTAQ 615

Query: 339  LSIVWLRGSEP----IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ-----TELDF 389
            LS  W  G++     I +  + R   S  +    T    +D   +T          E +F
Sbjct: 616  LS--WKEGTDNHSPVIAYSVQARTPFSVGWQTATTVPEVIDGKTHTATVVELNPWVEYEF 673

Query: 390  --------------IEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH- 434
                          + ++   T +   E P +          + V++W+PV  +   G  
Sbjct: 674  RVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEG 733

Query: 435  ------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
                  FR   V  W +           V + ES        +P S    +V  +N    
Sbjct: 734  FGYVVAFRPLGVTNWIQTVVTSPDTPRYVFRNES-------ILPFSLYEVKVGVYNNKGE 786

Query: 489  GPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
            GP S + +  + E  P    S + A  L SS   + W  +  +  NG L+GY+++Y +  
Sbjct: 787  GPFSPVTTVFSAEEEPTIAPSQVSANSLSSSEIEVSWNAIPWKLSNGHLLGYEVRYWNNG 846

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV----- 600
            G +      +L    +   TSA+L GL+ +  Y   +  +  AG G  S  +        
Sbjct: 847  GEEESS--SKLKVAGN--VTSARLRGLKSNLAYYTAVRAFNSAGTGPFSATVNATTKKTP 902

Query: 601  PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ 660
            P + P NV    +T   ++++W  +  +E+ +    Y++F+R  +     N   VL+  +
Sbjct: 903  PSQPPGNVVWN-ATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQ----NNVQVLNTNK 957

Query: 661  --SELVLANQPTFQPYEIKVVQTWTEKDGEGS----IRELIVNKGESTTTEVDKFVPASK 714
              +EL+L   P  + Y I+V  T    DG  S    I  +        T+ +    P S 
Sbjct: 958  TSAELLL---PIKEDYIIEVKATTDGGDGTSSEQIRIPRITNMDARGCTSAISTVYPVSS 1014

Query: 715  NFARVLAF 722
              + ++ F
Sbjct: 1015 YVSVIMLF 1022



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 183/449 (40%), Gaps = 43/449 (9%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS-DQGSY 102
           V   +KK+ L C   G P P   W  +G  I+ S          +L++ +   + D G+Y
Sbjct: 39  VGSEDKKITLNCEARGNPSPHYRWQLNGSDIDLSMEYRYKLIRGNLVVMNPNRNWDTGNY 98

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEI 157
            C  +N VG   S    L       F T     ++  E + V   C   G P    E   
Sbjct: 99  QCFATNSVGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLC---GPPPHSGELSY 155

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LG----Y 205
            W+ N  P S    + RR V      + I  +  SD GNY C  T++      LG     
Sbjct: 156 AWIFNEYP-SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSAVTNDRVLGSPTPL 214

Query: 206 VYKDVYVNVLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRY 264
           V +   V +  + P+I  + P+      G TV L C   G P P++NW  +       + 
Sbjct: 215 VLRSDGV-MGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKV 273

Query: 265 TILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQ 323
            + + +G L+I +    DSG Y C A N  G     G LT     H     +D E+    
Sbjct: 274 KLRKFSGVLEIPNFQQEDSGSYECIAENSRGKNVARGRLTYYAKPHWVQLIKDVELAVED 333

Query: 324 SATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           S  + C A   P  K S  WL+  E +  E     +Q  + +LT++  +  DSG + C A
Sbjct: 334 SLYWECRASGKP--KPSYRWLKNGEALVLEER---IQIENGALTISNLNVTDSGMFQCIA 388

Query: 384 QTELDFIEAQATLTVQVPLEAPSNFT------LIQVIDAKKAVVSWNP-VSPQSLRGHFR 436
           + +   + + A L V   + +  +F+      LIQV    +  +   P  SP++L    +
Sbjct: 389 ENKHGLVYSSAELKV---MASAPDFSKTPMKKLIQVQVGSEVNLDCKPRASPRALSSWKK 445

Query: 437 GYKVQTWTEKDG---EGSIRELIVNKGES 462
           G  +   +E+     +G ++ + V K ++
Sbjct: 446 GEVIVQESERTSFLNDGGLKIVNVTKADA 474



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 123/300 (41%), Gaps = 32/300 (10%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +E++ +T  C+A G P P   W  NG  I  +     + + 
Sbjct: 22  LLQGPVFVKEPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDIDLSMEYRYKLIR 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N + +   R  DTGNY C ATNS+G +         A+        +   +V +G+ VV
Sbjct: 82  GNLVVMNPNRNWDTGNYQCFATNSVGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        WI N+     E    R+   ETG L I  V  +D G YTC 
Sbjct: 142 LLC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCV 197

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
             + +   +  GS   L ++    + +         PE      G +    C A+ +P  
Sbjct: 198 VTSAVTNDRVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +++  W R S+ + F S+ +  + +   L +    + DSG Y C A+       A+  LT
Sbjct: 258 QIN--WRR-SDGLPFSSKVKLRKFSGV-LEIPNFQQEDSGSYECIAENSRGKNVARGRLT 313


>gi|291408740|ref|XP_002720672.1| PREDICTED: contactin 4-like [Oryctolagus cuniculus]
          Length = 1049

 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 188/721 (26%), Positives = 285/721 (39%), Gaps = 93/721 (12%)

Query: 47  RNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           R   V+L C   G P+P   W + DG P+    R  + +    L I + +  D G Y C 
Sbjct: 263 RGATVKLECFALGNPVPTITWRRADGKPLARKSRRHKSS--GVLEIPNFQQEDAGLYECV 320

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             N  G+       L+  A P +  +   I+ A EE+V +EC+A+G P+P   W+ NG+P
Sbjct: 321 AENSRGK-NVVRGQLTFYAQPSWIQKINDIHVAMEESVFWECRANGRPKPTYRWLKNGEP 379

Query: 166 ISQAPPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           +       R ++    G   IT+ NL  SD G Y C A N  G  +    + V+A  P+ 
Sbjct: 380 LLT-----RDRIQIEQGTLNITVVNL--SDAGMYQCVAENEHGAAFSSAELRVIAAGPDF 432

Query: 222 TEAPKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVA 278
           +       T+   G    + C    +PKP   W   +  L    R TI E GDL+I +V 
Sbjct: 433 SRTLLKRVTLVRVGGEAAIECNPKASPKPVYTWKKGRDVLRESERITISEDGDLRIVNVT 492

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            AD+G YTC A N  GTA  +G+L VK+ T +T  P   +V  G+S    C    D SL 
Sbjct: 493 KADTGSYTCIATNHFGTASSTGNLVVKDPTRVTVPPSSMDVTVGESIVLPCQVTHDHSLD 552

Query: 339 LSIVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +   W      IDF+ +     R    +   L +       +G+Y C  QT +D +   A
Sbjct: 553 IVFAWSFNGRLIDFDKDGDHFERVGGDSAGDLMIRNIQLTHAGRYVCMVQTSVDRLSVTA 612

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEG 450
            L V+ P   P   T+ ++ D+  A +SW P  P +       Y +Q  T          
Sbjct: 613 DLVVRGPPGPPEAVTIDEITDS-TAQLSWRP-GPDN-HSPVTTYIIQARTPFSVGWQAVS 669

Query: 451 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTPE 501
           ++ ELI   G + T  V    P  +   R +A N    G PS         E +  VTP 
Sbjct: 670 TVPELI--DGRTFTATVVGLSPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPA 727

Query: 502 GVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
            V G   S        S   + W  V  E  NG   GY + ++       G ++  L  +
Sbjct: 728 NVSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFR-----PYGKMIWMLTVL 775

Query: 560 --SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNN 617
             +D      +   + P + + + +  +   G+G         PF  P  V      P  
Sbjct: 776 ASADACRYVFRNESVRPFSPFEVKVGVFNNKGEG---------PFSPPTVVYSADEEPTK 826

Query: 618 LVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIK 677
              S  A      +       +FW                   +  +  N+   Q YE+K
Sbjct: 827 PPASIFA-----RSLSATDIEVFW-------------------ASPLEKNRGRIQGYEVK 862

Query: 678 VVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 737
               W  +D E + R+ I   G  T+T +     ++     V A+N A  GP S  ++  
Sbjct: 863 Y---WRHEDKEENARK-IRTIGNQTSTTITNLQGSALYHLAVKAYNSAGTGPASATVNVT 918

Query: 738 T 738
           T
Sbjct: 919 T 919



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 163/630 (25%), Positives = 244/630 (38%), Gaps = 70/630 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLA--APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   +           D  V+    P   V+ PE +  
Sbjct: 202 NLYIAKVEPSDVGNYTCVVTNTVTNQRVLGPPTPLVLRDDGVMGEYEPKIEVQFPETVPT 261

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           +   TV  EC A G P P I W   +GKP+++     RR      + I N ++ D G Y 
Sbjct: 262 SRGATVKLECFALGNPVPTITWRRADGKPLAR---KSRRHKSSGVLEIPNFQQEDAGLYE 318

Query: 197 CNATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           C A NS G   K+V    L     P   +   D +    ++V   CR  G PKP   W+ 
Sbjct: 319 CVAENSRG---KNVVRGQLTFYAQPSWIQKINDIHVAMEESVFWECRANGRPKPTYRWLK 375

Query: 255 NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
           N + L       +E G L IT V  +D+G Y C A N+ G A  S  L V     I   P
Sbjct: 376 NGEPLLTRDRIQIEQGTLNITVVNLSDAGMYQCVAENEHGAAFSSAELRV-----IAAGP 430

Query: 315 EDYE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
           +           V  G  A   CN  + P  K    W +G + +  ESE R   S D  L
Sbjct: 431 DFSRTLLKRVTLVRVGGEAAIECNPKASP--KPVYTWKKGRDVLR-ESE-RITISEDGDL 486

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV----- 421
            +   ++ D+G YTC A        +   L V+ P       + + V   +  V+     
Sbjct: 487 RIVNVTKADTGSYTCIATNHFGTASSTGNLVVKDPTRVTVPPSSMDVTVGESIVLPCQVT 546

Query: 422 ---SWNPVSPQSLRGHFRGY-KVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 477
              S + V   S  G    + K     E+ G  S  +L++   +   T   ++V   +  
Sbjct: 547 HDHSLDIVFAWSFNGRLIDFDKDGDHFERVGGDSAGDLMIRNIQ--LTHAGRYVCMVQTS 604

Query: 478 ARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
              L+           + + +   G PG  +++    +  S   L W      +  +  Y
Sbjct: 605 VDRLS-----------VTADLVVRGPPGPPEAVTIDEITDSTAQLSWRPGPDNHSPVTTY 653

Query: 538 KIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-- 594
            I  Q+     VG   +  +P + D  T +A + GL P  +Y          G G  S  
Sbjct: 654 II--QARTPFSVGWQAVSTVPELIDGRTFTATVVGLSPWVEYEFRTVAANVIGIGEPSRP 711

Query: 595 ----KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
               +    +P   P NV G G + + LVI+W  +PE   N   F Y + +R +     W
Sbjct: 712 SEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRPYGK-MIW 770

Query: 651 NQDDVLDWRQSELVLANQPT--FQPYEIKV 678
               +        V  N+    F P+E+KV
Sbjct: 771 MLTVLASADACRYVFRNESVRPFSPFEVKV 800



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 130/514 (25%), Positives = 197/514 (38%), Gaps = 54/514 (10%)

Query: 19  VIATGISASQNRHAPKQQYVTRKKEVAL----RNKKVELFCIFGGTPLPQTIWSKDGVPI 74
           ++A  +  S +R      +V     V        +KV+L C   GTP P   W  +G  +
Sbjct: 34  IVAASLLVSDDRVLHGPVFVQEPSHVMFPLDSEERKVKLSCEAEGTPKPLIRWKLNGTDV 93

Query: 75  NPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYF-TVEP 132
           +            SL+I +  +  D G+Y C  +N  G   S    L       F T   
Sbjct: 94  DIGMDFRYSVVEGSLLINNPNKTQDAGTYQCIATNSFGTVVSREAKLQFAYLENFRTRTR 153

Query: 133 EFINAAEEETVTFECKA---SGLPEPEIHWVHNGKPISQAPPNPRRKVG--PNRITIENL 187
             ++    + +   C     SG  E    W+ N +P  Q   + RR V      + I  +
Sbjct: 154 STVSVRRGQGMVLLCAPPPHSG--ELSYAWIFNERPSYQ---DSRRFVSQETGNLYIAKV 208

Query: 188 RKSDTGNYGCNATNS------LG----YVYKDVYVNVLAHAPEI-TEAPKDEYTVDGKTV 236
             SD GNY C  TN+      LG     V +D  V +  + P+I  + P+   T  G TV
Sbjct: 209 EPSDVGNYTCVVTNTVTNQRVLGPPTPLVLRDDGV-MGEYEPKIEVQFPETVPTSRGATV 267

Query: 237 VLTCRVFGAPKPEVNWIH-NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGT 295
            L C   G P P + W   + K L         +G L+I +    D+G Y C A N  G 
Sbjct: 268 KLECFALGNPVPTITWRRADGKPLARKSRRHKSSGVLEIPNFQQEDAGLYECVAENSRGK 327

Query: 296 AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE 355
               G LT         +  D  V   +S  + C A   P  K +  WL+  EP+     
Sbjct: 328 NVVRGQLTFYAQPSWIQKINDIHVAMEESVFWECRANGRP--KPTYRWLKNGEPLLTRDR 385

Query: 356 PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNF------- 408
              +Q    +L +T  +  D+G Y C A+ E     + A L V   + A  +F       
Sbjct: 386 ---IQIEQGTLNITVVNLSDAGMYQCVAENEHGAAFSSAELRV---IAAGPDFSRTLLKR 439

Query: 409 -TLIQVIDAKKAVVSWNP-VSPQSLRGHFRGYKVQTWTEK---DGEGSIRELIVNK---G 460
            TL++V    +A +  NP  SP+ +    +G  V   +E+     +G +R + V K   G
Sbjct: 440 VTLVRV--GGEAAIECNPKASPKPVYTWKKGRDVLRESERITISEDGDLRIVNVTKADTG 497

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
             T    + F  AS     V+        PPS +
Sbjct: 498 SYTCIATNHFGTASSTGNLVVKDPTRVTVPPSSM 531



 Score = 42.4 bits (98), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 20/196 (10%)

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            RG  +GY+V+ W  +D E + R+ I   G  T+T +     ++     V A+N A  GP 
Sbjct: 853  RGRIQGYEVKYWRHEDKEENARK-IRTIGNQTSTTITNLQGSALYHLAVKAYNSAGTGPA 911

Query: 492  SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
            S  ++  T    P   PG +    +     S   L W  VK  +    + GYK+ Y+  +
Sbjct: 912  SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALENESEVKGYKVLYRWSR 967

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
             +           + +   TS +L+ L     Y + +  +++ GDG+ S+ +      N 
Sbjct: 968  QSSTS--------VIETNKTSVELS-LPFDEDYIVEIRPFSEGGDGSSSEQIRIPKISNA 1018

Query: 606  DNVEGRGSTPNNLVIS 621
                   +TP+   +S
Sbjct: 1019 YARGSGAATPSACTLS 1034


>gi|291392425|ref|XP_002712732.1| PREDICTED: contactin 1 [Oryctolagus cuniculus]
          Length = 1076

 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 191/726 (26%), Positives = 300/726 (41%), Gaps = 86/726 (11%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 316 PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKII 373

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G  K +   + V A P +    E IN  E +    + + C A
Sbjct: 374 NIQLEDEGLYECEAENIRGRDK-HQAKIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 429

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG          R ++    +T EN      G Y C A N+ G +Y +
Sbjct: 430 TGKPIPTIRWLKNGYAYH------RGELRLYDVTFEN-----AGMYQCIAENTHGAIYAN 478

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L  G R  I
Sbjct: 479 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNGSRILI 538

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++  +D G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 539 WEDGSLEINNITRSDGGVYTCFAENNRGKANSTGTLVITDPTRIILAPLNADITVGENAT 598

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  D +L L+ VW      IDF  E       F+  N+  L +  +    +G+YTC
Sbjct: 599 MQCAASFDSALDLTFVWSFNGYVIDFNKENIHYQRNFMLDNNGELLIRNAQLKHAGRYTC 658

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            AQT +D   A A L V+ P   P     I+ + A    ++W+  S          Y +Q
Sbjct: 659 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDVRATSVALTWSRGSDN--HSPISKYTIQ 715

Query: 442 TWTE-KDG--EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
           T T+  DG  +      I+         VD  +P  +   RV+A N    G PS   + +
Sbjct: 716 TKTQLSDGWKDAKTDPPIIEGNMEAAKAVD-LIPWMEYEFRVVATNTLGLGEPSIPSNKI 774

Query: 499 TPEGVPGTVQSLEAIPLGSS--AFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLE 554
             +G    V   +    G S     + W  +  E   G   GY + ++   G +   +  
Sbjct: 775 KTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT- 833

Query: 555 RLPYISDPTTTS--AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRG 612
               +++P T     K   + PST +++ +  +   GDG  S  L  V     D      
Sbjct: 834 ----VTNPDTGRYVHKDESMSPSTAFQVKVKAFNSKGDGPYS--LIAVINSAQD---APS 884

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
             P  + +   +  EI   + H+K+ +                      E ++ N     
Sbjct: 885 EAPTEVGVKVLSSSEI---SVHWKHVL----------------------EKIVEN----- 914

Query: 673 PYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 732
            Y+I+    W   D E +   + V+  E  +  ++  +P ++ F  V A N A  GP S+
Sbjct: 915 -YQIRY---WAAHDKEAAAHRVQVSSQE-YSARLENLLPDTQYFVEVGACNSAGCGPSSD 969

Query: 733 IISFVT 738
           +I   T
Sbjct: 970 VIDTFT 975



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 145/608 (23%), Positives = 225/608 (37%), Gaps = 75/608 (12%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 264 VSQTN--GNLYIANVESSDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVV 321

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  + A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 322 QFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIINIQLE 378

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N  G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 379 DEGLYECEAENIRGRDKHQAKIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 437

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 438 RWLKN-----GYAY---HRGELRLYDVTFENAGMYQCIAENTHGAIYANAELKILALAPT 489

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   D SL 
Sbjct: 490 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNGS--RILIWEDGSLE 545

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC A+       +  TL +  P   + AP N  +    +A  +   S+
Sbjct: 546 INNITRSDGGVYTCFAENNRGKANSTGTLVITDPTRIILAPLNADITVGENATMQCAASF 605

Query: 424 NPVSPQSLRGHFRGYKVQ-----------TWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
           +     +    F GY +               + +GE  IR   +      T      V 
Sbjct: 606 DSALDLTFVWSFNGYVIDFNKENIHYQRNFMLDNNGELLIRNAQLKHAGRYTCTAQTIVD 665

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
            S   A ++                    G PG    L    + +++  L W +    + 
Sbjct: 666 NSSASADLVV------------------RGPPGPPGGLRIEDVRATSVALTWSRGSDNHS 707

Query: 533 VLMGYKI--KYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGD 590
            +  Y I  K Q   G K     +  P I +    +AK   L P  +Y   +      G 
Sbjct: 708 PISKYTIQTKTQLSDGWKDA---KTDPPIIEGNMEAAKAVDLIPWMEYEFRVVATNTLGL 764

Query: 591 GAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           G  S      K     P   P +V G G +   L I+W  +    H   +F Y + ++  
Sbjct: 765 GEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPF 824

Query: 645 NTGEAWNQ 652
           + GE W +
Sbjct: 825 D-GEEWKK 831



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 139/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   ++  SDR S    G +L+I + +   D G Y C  S
Sbjct: 135 KVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSM--VGGNLVINNPDKQKDAGVYYCLAS 192

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 193 NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 246

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 247 WLLNEFPVF-ITMDKRRFVSQTNGNLYIANVESSDKGNYSCFVSSP--SITKSVFSKFIP 303

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 304 LIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 363

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 364 STSGAVLKIINIQLEDEGLYECEAENIRGRDKHQAKIYVQAFPEWVEHINDTEVDIGSDL 423

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+         E R      Y +T       ++G Y C A+ 
Sbjct: 424 YWPCVATGKPI--PTIRWLKNGYAY-HRGELRL-----YDVTFE-----NAGMYQCIAEN 470

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 471 THGAIYANAELKI 483



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 91/386 (23%), Positives = 136/386 (35%), Gaps = 54/386 (13%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLI 90
           P+Q    R   VA+R     +FC     P  Q  T WS  G             + +SL 
Sbjct: 53  PEQDTRCRHAAVAMR-----VFCRHTMAPDIQSFTHWSVHG-------------WFRSLE 94

Query: 91  IKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKAS 150
             H E         E   G G              P  T+ PE    + E  V+  C+A 
Sbjct: 95  DHHAELQVAEPLVSEEDKGFGPIFE--------EQPINTIYPE---ESLEGKVSLNCRAR 143

Query: 151 GLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDV 210
             P P   W  N   +     +    VG N +     ++ D G Y C A+N+ G V    
Sbjct: 144 ASPFPVYKWRMNNGDVDLTS-DRYSMVGGNLVINNPDKQKDAGVYYCLASNNYGMVRSTE 202

Query: 211 YVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-FGAPKP-EVNWIHNQ----KELTGGR 263
                 +        + E  V +GK +VL C   +  P      W+ N+      +   R
Sbjct: 203 ATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRR 262

Query: 264 YTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLT----VKEHT------HITDQ 313
           +     G+L I +V  +D G Y+CF  +   T            + E T       I  Q
Sbjct: 263 FVSQTNGNLYIANVESSDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQ 322

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +D     GQ+ T  C A+ +P     I W +  EP+   +E   + ++   L +     
Sbjct: 323 FKDVYALMGQNVTLECFALGNPV--PDIRWRKVLEPMPSTAE---ISTSGAVLKIINIQL 377

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQ 399
            D G Y C A+      + QA + VQ
Sbjct: 378 EDEGLYECEAENIRGRDKHQAKIYVQ 403



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 8/144 (5%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            P EAP+    ++V+ + +  V W  V    L      Y+++ W   D E +   + V+  
Sbjct: 883  PSEAPTEVG-VKVLSSSEISVHWKHV----LEKIVENYQIRYWAAHDKEAAAHRVQVSSQ 937

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
            E  +  ++  +P ++ F  V A N A  GP S++I   T +  P     + +     S +
Sbjct: 938  E-YSARLENLLPDTQYFVEVGACNSAGCGPSSDVIDTFTKKAPPSQPPRIISSVRSGSRY 996

Query: 521  YLKW--VKPEQPNGVLMGYKIKYQ 542
             + W  V        + GYK+ Y+
Sbjct: 997  IITWDHVVALSNESTVTGYKVLYR 1020


>gi|114585164|ref|XP_001136570.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
           [Pan troglodytes]
          Length = 1209

 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 177/713 (24%), Positives = 297/713 (41%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 253 LKGEILLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYGKTLKIENVSYQDKGNYRCT 311

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG P
Sbjct: 312 ASNFLGTA-THDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 370

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +   P      V P  I+  NL+ + T  Y C A+N  G +  +  ++V+   P I    
Sbjct: 371 VDNHP-FAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQTKD 429

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            + Y TV G +  L C  F +P+  V+W  +   K L G RY I E G L+I      D+
Sbjct: 430 GENYATVVGYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDA 489

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L 
Sbjct: 490 GSYSCWVENAIGKTAVTANLDIRNATKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLK 549

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y C A T LD       +TV 
Sbjct: 550 LSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVL 609

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +  +   +   Y V+    K+  G   EL   +
Sbjct: 610 DVPDPPENLHLSERQN-RSVRLTWEAGADHN--SNISEYIVEFEGNKEEPGRWEELTRVQ 666

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 667 GKKTTV-ILPLAPFVRYQFRVIAVNEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQP 725

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 726 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 776

Query: 576 T--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G + + +  Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 777 VYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKD 836

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ +++        
Sbjct: 837 RVHGRLKGYQINW--------WKTKSLLDGRT-----------HPKEVNILRF------- 870

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 871 ---------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTPEG 914



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 127/539 (23%), Positives = 223/539 (41%), Gaps = 49/539 (9%)

Query: 88   SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
            +L I      D GSY+C V N +G+  + + +L +  A    V P+     +   +   C
Sbjct: 478  TLQINRTTEEDAGSYSCWVENAIGKT-AVTANLDIRNATKLRVSPKNPRIPKLHMLELHC 536

Query: 148  KA---SGLPEP-EIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202
            ++   S L    ++ W  +G+        + R  +    +TI N+   D G Y C+A  +
Sbjct: 537  ESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTA 596

Query: 203  LGYVYKDVYVNVLAHAPEITEAPKDEYTVD--GKTVVLTCRVFGAPKPE------VNWIH 254
            L        V VL    ++ + P++ +  +   ++V LT    GA          V +  
Sbjct: 597  LDSAADITQVTVL----DVPDPPENLHLSERQNRSVRLTWEA-GADHNSNISEYIVEFEG 651

Query: 255  NQKELTGGRYTILETGDLKITDVAFADSG----EYTCFARNKLGTAQGSGSLTVKEHTHI 310
            N++E   GR+  L     K T V    +     ++   A N++G +Q S      E    
Sbjct: 652  NKEE--PGRWEELTRVQGKKTTVILPLAPFVRYQFRVIAVNEVGRSQPSQPSDRHETPPA 709

Query: 311  T--DQPEDYEVEAGQSAT-------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS 361
                 P++  V+A Q           +    + P L+  + W     P+++E E      
Sbjct: 710  APDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TV 765

Query: 362  NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKK 418
             +++L V   +         +A  +L       ++T+    + P    +I    VI++  
Sbjct: 766  TNHTLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTL 825

Query: 419  AVVSWNPVSPQSLRGHFRGYKVQTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPA 473
              V+W+ +    + G  +GY++  W  K   DG    +E+ + +  G+  +  V      
Sbjct: 826  VKVTWSTIPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAF 885

Query: 474  SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV 533
            S+    VLA+N    GP SE   F TPEGVP     L+ I +      L W  P++ NG 
Sbjct: 886  SEFHLTVLAYNSKGAGPESEPYIFQTPEGVPEQPTFLKVIKVDKDTATLSWGVPKKLNGN 945

Query: 534  LMGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            L GY ++YQ +  T ++G L +    I+ P+  S  L+ L  +TKY+ +L   T  G G
Sbjct: 946  LTGYLLQYQIINDTYEIGELNDI--NITTPSKPSWHLSNLNATTKYKFYLRACTSQGCG 1002



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 103/414 (24%), Positives = 171/414 (41%), Gaps = 46/414 (11%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P   W+KDG P   +D   ++  N G   I      S  QG Y C  SN
Sbjct: 54  QIECEAKGNPEPIFSWTKDGNPFYFTDHRIMTSNNSGTFRIPNEGHISHFQGKYRCFASN 113

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKP 165
            +G A S  I+  V + P F  E  + +   E + +   C    GLP   I+W++   + 
Sbjct: 114 KLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEH 173

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-NSLGYVYKDVYVNVLAHA----- 218
           I Q       + G   +   N+ + D+ N Y C A    L  + + + + +  ++     
Sbjct: 174 IEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNSIK 231

Query: 219 ---PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILET 269
              P++   P +  +      + G+ ++L C   G P P+V+W     +L  GR T    
Sbjct: 232 QRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKGRETKENY 291

Query: 270 GD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           G  LKI +V++ D G Y C A N LGTA     + V+E    T +P+      G +    
Sbjct: 292 GKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKKPQSAVYSTGSNGILL 351

Query: 329 CNAVSDPSLKLSIVWLRGSEPID---------FESEPRF--VQSNDYSLTVTKSSELDSG 377
           C A  +P  + +I W     P+D         F  E  F  +Q N  ++   ++S +   
Sbjct: 352 CEAEGEP--QPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHG- 408

Query: 378 QYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDAKKAVVSWNPV 426
             T  A   +D ++ +  +  +       +   S F   +   + +AVVSW  V
Sbjct: 409 --TILANANIDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV 460



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 82/347 (23%), Positives = 128/347 (36%), Gaps = 42/347 (12%)

Query: 86  GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTF 145
           G+ LI+  + F  + S   E+ + V +  +      V  A  F           +E    
Sbjct: 7   GRGLIVSLIFFLLKFSKAIEIPSSVQQVPTIIKQSKVQVAFPF-----------DEYFQI 55

Query: 146 ECKASGLPEPEIHWVHNGKP--ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSL 203
           EC+A G PEP   W  +G P   +          G  RI  E       G Y C A+N L
Sbjct: 56  ECEAKGNPEPIFSWTKDGNPFYFTDHRIMTSNNSGTFRIPNEGHISHFQGKYRCFASNKL 115

Query: 204 GYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHNQKELT- 260
           G    +    ++   P+  +   D   V +G  +VL C    G P   + W++ + E   
Sbjct: 116 GIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEHIE 175

Query: 261 -GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTHITDQ-- 313
              R  + + GDL   +V   DS  +Y CFA   R +    +    LTV     I  +  
Sbjct: 176 QDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNSIKQRKP 235

Query: 314 -----PEDYEVEA------GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
                P +   E+      G+     C A   P+ ++    + G  P   E++  + +  
Sbjct: 236 KLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGK-- 293

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFT 409
             +L +   S  D G Y C A   L      AT    V +E P  +T
Sbjct: 294 --TLKIENVSYQDKGNYRCTASNFL----GTATHDFHVIVEEPPRWT 334


>gi|85397970|gb|AAI04919.1| CHL1 protein [Homo sapiens]
 gi|168277596|dbj|BAG10776.1| neural cell adhesion molecule L1-like protein precursor [synthetic
           construct]
 gi|219520164|gb|AAI43497.1| CHL1 protein [Homo sapiens]
          Length = 1208

 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 177/713 (24%), Positives = 297/713 (41%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 253 LKGEILLLECFAEGLPTPQVDWNKIGGDL-PKGREAKENYGKTLKIENVSYQDKGNYRCT 311

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG P
Sbjct: 312 ASNFLGTA-THDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 370

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +   P      V P  I+  NL+ + T  Y C A+N  G +  +  ++V+   P I    
Sbjct: 371 VDNHP-FAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQTKD 429

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            + Y TV G +  L C  F +P+  V+W  +   K L G RY I E G L+I      D+
Sbjct: 430 GENYATVVGYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDA 489

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L 
Sbjct: 490 GSYSCWVENAIGKTAVTANLDIRNATKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLK 549

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y C A T LD       +TV 
Sbjct: 550 LSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVL 609

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +  +   +   Y V+    K+  G   EL   +
Sbjct: 610 DVPDPPENLHLSERQN-RSVRLTWEAGADHN--SNISEYIVEFEGNKEEPGRWEELTRVQ 666

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 667 GKKTTV-ILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 725

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 726 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 776

Query: 576 T--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G + + +  Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 777 VYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKD 836

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ +++        
Sbjct: 837 RVHGRLKGYQINW--------WKTKSLLDGRT-----------HPKEVNILRF------- 870

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 871 ---------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTPEG 914



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 126/570 (22%), Positives = 223/570 (39%), Gaps = 60/570 (10%)

Query: 135 INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSD 191
           I   + E +  EC A GLP P++ W   G  + +      R+   N    + IEN+   D
Sbjct: 250 ITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKG-----REAKENYGKTLKIENVSYQD 304

Query: 192 TGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVN 251
            GNY C A+N LG    D +V ++   P  T+ P+      G   +L C   G P+P + 
Sbjct: 305 KGNYRCTASNFLGTATHDFHV-IVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIK 363

Query: 252 WIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH 309
           W  N   +    +   ++   ++  T++    +  Y C A N  GT   + ++ V +   
Sbjct: 364 WRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRP 423

Query: 310 I--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
           +  T   E+Y    G SA   C   + P   +S  W +  E    E     +  N  +L 
Sbjct: 424 LIQTKDGENYATVVGYSAFLHCEFFASPEAVVS--WQKVEEVKPLEGRRYHIYENG-TLQ 480

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVS 427
           + +++E D+G Y+C  +  +      A L ++               +A K  VS  P +
Sbjct: 481 INRTTEEDAGSYSCWVENAIGKTAVTANLDIR---------------NATKLRVS--PKN 523

Query: 428 PQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGES---TTTEVDKFVPASKNFA---RVL 481
           P+  + H      ++  +   + S++      GE+     TE  + +    N       L
Sbjct: 524 PRIPKLHMLELHCESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANLTISNVTL 583

Query: 482 AFNGAYNGPP------SEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
              G Y          +  I+ VT   VP   ++L      + +  L W      N  + 
Sbjct: 584 EDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGADHNSNIS 643

Query: 536 GYKIKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            Y ++++   G K  P   E L  +    TT   +  L P  +Y+  +    + G    S
Sbjct: 644 EYIVEFE---GNKEEPGRWEELTRVQGKKTTV--ILPLAPFVRYQFRVIAVNEVGRSQPS 698

Query: 595 KYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
           +   +       P +NP N+  + S P  ++I W  +  +E N P  +YR+ W+      
Sbjct: 699 QPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPV 758

Query: 649 AWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            W ++ V +     L +     + PY++KV
Sbjct: 759 EWEEETVTN---HTLRVMTPAVYAPYDVKV 785



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 128/539 (23%), Positives = 223/539 (41%), Gaps = 49/539 (9%)

Query: 88   SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
            +L I      D GSY+C V N +G+  + + +L +  A    V P+     +   +   C
Sbjct: 478  TLQINRTTEEDAGSYSCWVENAIGKT-AVTANLDIRNATKLRVSPKNPRIPKLHMLELHC 536

Query: 148  KA---SGLPEP-EIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202
            ++   S L    ++ W  +G+        + R  +    +TI N+   D G Y C+A  +
Sbjct: 537  ESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTA 596

Query: 203  LGYVYKDVYVNVLAHAPEITEAPKDEYTVD--GKTVVLTCRVFGAPKPE------VNWIH 254
            L        V VL    ++ + P++ +  +   ++V LT    GA          V +  
Sbjct: 597  LDSAADITQVTVL----DVPDPPENLHLSERQNRSVRLTWEA-GADHNSNISEYIVEFEG 651

Query: 255  NQKELTGGRYTILETGDLKITDVAFADSG----EYTCFARNKLGTAQGSGSLTVKEHTHI 310
            N++E   GR+  L     K T V    +     ++   A N++G +Q S      E    
Sbjct: 652  NKEE--PGRWEELTRVQGKKTTVILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPA 709

Query: 311  T--DQPEDYEVEAGQSAT-------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS 361
                 P++  V+A Q           +    + P L+  + W     P+++E E      
Sbjct: 710  APDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TV 765

Query: 362  NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKK 418
             +++L V   +         +A  +L       ++T+    + P    +I    VI++  
Sbjct: 766  TNHTLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTL 825

Query: 419  AVVSWNPVSPQSLRGHFRGYKVQTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPA 473
              V+W+ V    + G  +GY++  W  K   DG    +E+ + +  G+  +  V      
Sbjct: 826  VKVTWSTVPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAF 885

Query: 474  SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV 533
            S+    VLA+N    GP SE   F TPEGVP     L+ I +      L W  P++ NG 
Sbjct: 886  SEFHLTVLAYNSKGAGPESEPYIFQTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGN 945

Query: 534  LMGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            L GY ++YQ +  T ++G L +    I+ P+  S  L+ L  +TKY+ +L   T  G G
Sbjct: 946  LTGYLLQYQIINDTYEIGELNDI--NITTPSKPSWHLSNLNATTKYKFYLRACTSQGCG 1002



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 103/414 (24%), Positives = 169/414 (40%), Gaps = 46/414 (11%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P   W+KDG P   +D   I   N G   I      S  QG Y C  SN
Sbjct: 54  QIECEAKGNPEPTFSWTKDGNPFYFTDHRIIPSNNSGTFRIPNEGHISHFQGKYRCFASN 113

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKP 165
            +G A S  I+  V + P F  E  + +   E + +   C    GLP   I+W++   + 
Sbjct: 114 KLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEH 173

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-NSLGYVYKDVYVNVLAHA----- 218
           I Q       + G   +   N+ + D+ N Y C A    L  + + + + +  ++     
Sbjct: 174 IEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNSIK 231

Query: 219 ---PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILET 269
              P++   P +  +      + G+ ++L C   G P P+V+W     +L  GR      
Sbjct: 232 QRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKGREAKENY 291

Query: 270 GD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           G  LKI +V++ D G Y C A N LGTA     + V+E    T +P+      G +    
Sbjct: 292 GKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKKPQSAVYSTGSNGILL 351

Query: 329 CNAVSDPSLKLSIVWLRGSEPID---------FESEPRF--VQSNDYSLTVTKSSELDSG 377
           C A  +P  + +I W     P+D         F  E  F  +Q N  ++   ++S +   
Sbjct: 352 CEAEGEP--QPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHG- 408

Query: 378 QYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDAKKAVVSWNPV 426
             T  A   +D ++ +  +  +       +   S F   +   + +AVVSW  V
Sbjct: 409 --TILANANIDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV 460



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 111/293 (37%), Gaps = 31/293 (10%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKP--ISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +E    EC+A G PEP   W  +G P   +     P    G  RI  E       G Y C
Sbjct: 50  DEYFQIECEAKGNPEPTFSWTKDGNPFYFTDHRIIPSNNSGTFRIPNEGHISHFQGKYRC 109

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN 255
            A+N LG    +    ++   P+  +   D   V +G  +VL C    G P   + W++ 
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNI 169

Query: 256 QKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTH 309
           + E      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV     
Sbjct: 170 ELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNS 229

Query: 310 ITDQ-------PEDYEVEA------GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           I  +       P +   E+      G+     C A   P+ ++    + G  P   E++ 
Sbjct: 230 IKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKGREAKE 289

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFT 409
            + +    +L +   S  D G Y C A   L      AT    V +E P  +T
Sbjct: 290 NYGK----TLKIENVSYQDKGNYRCTASNFL----GTATHDFHVIVEEPPRWT 334


>gi|355759126|gb|EHH61574.1| hypothetical protein EGM_19511 [Macaca fascicularis]
          Length = 1226

 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 180/713 (25%), Positives = 293/713 (41%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 270 LKGETLLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYGKTLKIENVSYQDKGNYRCT 328

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG P
Sbjct: 329 ASNFLGTA-THDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 387

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           I   P      V P  I+  NL+ + T  Y C A+N  G +     V+V+   P I    
Sbjct: 388 IDNHP-FAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILASANVDVVDVRPLIQTKD 446

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            + Y TV G +  L C  F +P+  V+W  +   K L G RY + + G L+I      D+
Sbjct: 447 GENYATVVGYSAFLHCEFFASPEAVVSWQKVEEAKPLEGRRYHVYDNGTLQINRTTEEDA 506

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L 
Sbjct: 507 GSYSCWVENAIGKTAVTANLDIRNATQLRVSPKNPRIPKLHMLELHCESKCDLHLKHSLK 566

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y C A T LD       +TV 
Sbjct: 567 LSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVL 626

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   +SW   +      +   Y V+    K+  G   EL   +
Sbjct: 627 DVPDPPENLHLSERQN-RSVRLSWE--AGDDHNSNISEYIVEFEGNKEDPGRWEELTRVQ 683

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 684 GKKTTV-ILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 742

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 743 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 793

Query: 576 T--KYRIHLAGYTKAGDG-AESKYLFYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G A      Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 794 VYAPYDVKVQAINQLGSGPAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKD 853

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ V++        
Sbjct: 854 RVHGRLKGYQINW--------WKTKSLLDGRT-----------HPKEVNVLRF------- 887

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 888 ---------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTPEG 931



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 142/648 (21%), Positives = 257/648 (39%), Gaps = 71/648 (10%)

Query: 54  FCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113
           +C F   P  +TI  K  +P+              L +  ++ ++  S + E+ +     
Sbjct: 203 YCCFAAFPRLRTIVQK--MPM-------------KLTVNSLKHANDSSSSTEIGSKANSI 247

Query: 114 KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           K     L  L  P  +     I   + ET+  EC A GLP P++ W   G  + +     
Sbjct: 248 KQRKPKL--LLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKG---- 301

Query: 174 RRKVGPN---RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
            R+   N    + IEN+   D GNY C A+N LG    D +V ++   P  T+ P+    
Sbjct: 302 -RETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHV-IVEEPPRWTKKPQSAVY 359

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCF 288
             G   +L C   G P+P + W  N   +    +   ++   ++  T++    +  Y C 
Sbjct: 360 STGSNGILLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTAVYQCE 419

Query: 289 ARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           A N  GT   S ++ V +   +  T   E+Y    G SA   C   + P   +S  W + 
Sbjct: 420 ASNVHGTILASANVDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS--WQKV 477

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE--- 403
            E    E   R+   ++ +L + +++E D+G Y+C  +  +      A L ++   +   
Sbjct: 478 EEAKPLEGR-RYHVYDNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNATQLRV 536

Query: 404 APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG------SIRELIV 457
           +P N  +      K  ++  +  S   L  H +     +W+ KDGE           +I+
Sbjct: 537 SPKNPRI-----PKLHMLELHCESKCDL--HLKHSLKLSWS-KDGEAFEINGTEDGRIII 588

Query: 458 NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS 517
           +    T + V          + + A + A +      I+ VT   VP   ++L      +
Sbjct: 589 DGANLTISNVTLEDQGIYCCSALTALDSAAD------ITQVTVLDVPDPPENLHLSERQN 642

Query: 518 SAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPST 576
            +  L W   +  N  +  Y ++++   G K  P   E L  +    TT   +  L P  
Sbjct: 643 RSVRLSWEAGDDHNSNISEYIVEFE---GNKEDPGRWEELTRVQGKKTTV--ILPLAPFV 697

Query: 577 KYRIHLAGYTKAGDGAESKYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEH 630
           +Y+  +    + G    S+   +       P +NP N+  + S P  ++I W  +  +E 
Sbjct: 698 RYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQ 757

Query: 631 NAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           N P  +YR+ W+       W ++ V +     L +     + PY++KV
Sbjct: 758 NGPGLEYRVTWKPQGAPVEWEEETVTN---HTLRVMTPAVYAPYDVKV 802



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 131/573 (22%), Positives = 227/573 (39%), Gaps = 47/573 (8%)

Query: 53   LFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L C F  +P     W K  +  P+    R    + G +L I      D GSY+C V N +
Sbjct: 460  LHCEFFASPEAVVSWQKVEEAKPLE-GRRYHVYDNG-TLQINRTTEEDAGSYSCWVENAI 517

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASG----LPEPEIHWVHNGKPI 166
            G+  + + +L +  A    V P+     +   +   C++          ++ W  +G+  
Sbjct: 518  GKT-AVTANLDIRNATQLRVSPKNPRIPKLHMLELHCESKCDLHLKHSLKLSWSKDGEAF 576

Query: 167  S-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
                  + R  +    +TI N+   D G Y C+A  +L        V VL    ++ + P
Sbjct: 577  EINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVL----DVPDPP 632

Query: 226  KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG-----GRYTILETGDLKITDVAFA 280
            ++ +  + +   +            N      E  G     GR+  L     K T V   
Sbjct: 633  ENLHLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEDPGRWEELTRVQGKKTTVILP 692

Query: 281  DSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSAT-------F 327
             +     ++   A N++G +Q S      E         P++  V+A Q           
Sbjct: 693  LAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPL 752

Query: 328  RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            +    + P L+  + W     P+++E E       +++L V   +         +A  +L
Sbjct: 753  KSMEQNGPGLEYRVTWKPQGAPVEWEEE----TVTNHTLRVMTPAVYAPYDVKVQAINQL 808

Query: 388  DFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWT 444
                A  ++T+    + P    +I    VI++    V+W+ +    + G  +GY++  W 
Sbjct: 809  GSGPAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQINWWK 868

Query: 445  EK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
             K   DG    +E+ V +  G+  +  V      S+    VLA+N    GP SE   F T
Sbjct: 869  TKSLLDGRTHPKEVNVLRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQT 928

Query: 500  PEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERLPY 558
            PEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T ++G L +    
Sbjct: 929  PEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGNLTGYLLQYQIINDTYEIGELNDI--N 986

Query: 559  ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            I+ P+  S  L+ L  +TKY+ +L   T  G G
Sbjct: 987  ITTPSKPSWHLSNLNATTKYKFYLRACTSRGCG 1019



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 166/416 (39%), Gaps = 63/416 (15%)

Query: 67  WSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSNGVGEAKSYSIDLSV- 122
           W+KDG P + +D   I+  N G   I      S  QG Y C  SN +G A S  I+  V 
Sbjct: 69  WTKDGNPFHFTDHRIITSNNSGTFRIPNEGHISHFQGKYRCFASNKLGIAMSEEIEFIVP 128

Query: 123 LAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKPISQAPPNPRRKVGP 179
              P F  E  + +   E + +   C    GLP   I+W++   + I Q       + G 
Sbjct: 129 TGVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEHIEQDERVYMSQKG- 187

Query: 180 NRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA--------------- 218
             +   N+ + D+ N Y C A        +  +   + VN L HA               
Sbjct: 188 -DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHANDSSSSTEIGSKANS 246

Query: 219 -----PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
                P++   P +  +      + G+T++L C   G P P+V+W     +L  GR T  
Sbjct: 247 IKQRKPKLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKE 306

Query: 268 ETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
             G  LKI +V++ D G Y C A N LGTA     + V+E    T +P+      G +  
Sbjct: 307 NYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKKPQSAVYSTGSNGI 366

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPID---------FESEPRF--VQSNDYSLTVTKSSELD 375
             C A  +P  + +I W     PID         F  E  F  +Q N  ++   ++S + 
Sbjct: 367 LLCEAEGEP--QPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVH 424

Query: 376 SGQYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDAKKAVVSWNPV 426
               T  A   +D ++ +  +  +       +   S F   +   + +AVVSW  V
Sbjct: 425 G---TILASANVDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV 477


>gi|358438179|ref|NP_001240316.1| neural cell adhesion molecule L1-like protein isoform 2 precursor
           [Homo sapiens]
 gi|317373561|sp|O00533.4|CHL1_HUMAN RecName: Full=Neural cell adhesion molecule L1-like protein;
           AltName: Full=Close homolog of L1; Contains: RecName:
           Full=Processed neural cell adhesion molecule L1-like
           protein; Flags: Precursor
          Length = 1208

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 177/713 (24%), Positives = 297/713 (41%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 253 LKGEILLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYGKTLKIENVSYQDKGNYRCT 311

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG P
Sbjct: 312 ASNFLGTA-THDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 370

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +   P      V P  I+  NL+ + T  Y C A+N  G +  +  ++V+   P I    
Sbjct: 371 VDNHP-FAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQTKD 429

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            + Y TV G +  L C  F +P+  V+W  +   K L G RY I E G L+I      D+
Sbjct: 430 GENYATVVGYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDA 489

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L 
Sbjct: 490 GSYSCWVENAIGKTAVTANLDIRNATKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLK 549

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y C A T LD       +TV 
Sbjct: 550 LSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVL 609

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +  +   +   Y V+    K+  G   EL   +
Sbjct: 610 DVPDPPENLHLSERQN-RSVRLTWEAGADHN--SNISEYIVEFEGNKEEPGRWEELTRVQ 666

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 667 GKKTTV-ILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 725

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 726 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 776

Query: 576 T--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G + + +  Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 777 VYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKD 836

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ +++        
Sbjct: 837 RVHGRLKGYQINW--------WKTKSLLDGRT-----------HPKEVNILRF------- 870

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 871 ---------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTPEG 914



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 124/567 (21%), Positives = 222/567 (39%), Gaps = 54/567 (9%)

Query: 135 INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSD 191
           I   + E +  EC A GLP P++ W   G  + +      R+   N    + IEN+   D
Sbjct: 250 ITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKG-----RETKENYGKTLKIENVSYQD 304

Query: 192 TGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVN 251
            GNY C A+N LG    D +V ++   P  T+ P+      G   +L C   G P+P + 
Sbjct: 305 KGNYRCTASNFLGTATHDFHV-IVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIK 363

Query: 252 WIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH 309
           W  N   +    +   ++   ++  T++    +  Y C A N  GT   + ++ V +   
Sbjct: 364 WRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRP 423

Query: 310 I--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
           +  T   E+Y    G SA   C   + P   +S  W +  E    E     +  N  +L 
Sbjct: 424 LIQTKDGENYATVVGYSAFLHCEFFASPEAVVS--WQKVEEVKPLEGRRYHIYENG-TLQ 480

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPV- 426
           + +++E D+G Y+C  +  +      A L ++       N T ++V      +   + + 
Sbjct: 481 INRTTEEDAGSYSCWVENAIGKTAVTANLDIR-------NATKLRVSPKNPRIPKLHMLE 533

Query: 427 --SPQSLRGHFRGYKVQTWTEKDGEG------SIRELIVNKGESTTTEVDKFVPASKNFA 478
                    H +     +W+ KDGE           +I++    T + V          +
Sbjct: 534 LHCESKCDSHLKHSLKLSWS-KDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCS 592

Query: 479 RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
              A + A +      I+ VT   VP   ++L      + +  L W      N  +  Y 
Sbjct: 593 AHTALDSAAD------ITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGADHNSNISEYI 646

Query: 539 IKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL 597
           ++++   G K  P   E L  +    TT   +  L P  +Y+  +    + G    S+  
Sbjct: 647 VEFE---GNKEEPGRWEELTRVQGKKTTV--ILPLAPFVRYQFRVIAVNEVGRSQPSQPS 701

Query: 598 FY------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWN 651
            +       P +NP N+  + S P  ++I W  +  +E N P  +YR+ W+       W 
Sbjct: 702 DHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWE 761

Query: 652 QDDVLDWRQSELVLANQPTFQPYEIKV 678
           ++ V +     L +     + PY++KV
Sbjct: 762 EETVTN---HTLRVMTPAVYAPYDVKV 785



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 128/539 (23%), Positives = 223/539 (41%), Gaps = 49/539 (9%)

Query: 88   SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
            +L I      D GSY+C V N +G+  + + +L +  A    V P+     +   +   C
Sbjct: 478  TLQINRTTEEDAGSYSCWVENAIGKT-AVTANLDIRNATKLRVSPKNPRIPKLHMLELHC 536

Query: 148  KA---SGLPEP-EIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202
            ++   S L    ++ W  +G+        + R  +    +TI N+   D G Y C+A  +
Sbjct: 537  ESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTA 596

Query: 203  LGYVYKDVYVNVLAHAPEITEAPKDEYTVD--GKTVVLTCRVFGAPKPE------VNWIH 254
            L        V VL    ++ + P++ +  +   ++V LT    GA          V +  
Sbjct: 597  LDSAADITQVTVL----DVPDPPENLHLSERQNRSVRLTWEA-GADHNSNISEYIVEFEG 651

Query: 255  NQKELTGGRYTILETGDLKITDVAFADSG----EYTCFARNKLGTAQGSGSLTVKEHTHI 310
            N++E   GR+  L     K T V    +     ++   A N++G +Q S      E    
Sbjct: 652  NKEE--PGRWEELTRVQGKKTTVILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPA 709

Query: 311  T--DQPEDYEVEAGQSAT-------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS 361
                 P++  V+A Q           +    + P L+  + W     P+++E E      
Sbjct: 710  APDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TV 765

Query: 362  NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKK 418
             +++L V   +         +A  +L       ++T+    + P    +I    VI++  
Sbjct: 766  TNHTLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTL 825

Query: 419  AVVSWNPVSPQSLRGHFRGYKVQTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPA 473
              V+W+ V    + G  +GY++  W  K   DG    +E+ + +  G+  +  V      
Sbjct: 826  VKVTWSTVPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAF 885

Query: 474  SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV 533
            S+    VLA+N    GP SE   F TPEGVP     L+ I +      L W  P++ NG 
Sbjct: 886  SEFHLTVLAYNSKGAGPESEPYIFQTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGN 945

Query: 534  LMGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            L GY ++YQ +  T ++G L +    I+ P+  S  L+ L  +TKY+ +L   T  G G
Sbjct: 946  LTGYLLQYQIINDTYEIGELNDI--NITTPSKPSWHLSNLNATTKYKFYLRACTSQGCG 1002



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 104/414 (25%), Positives = 170/414 (41%), Gaps = 46/414 (11%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P   W+KDG P   +D   I   N G   I      S  QG Y C  SN
Sbjct: 54  QIECEAKGNPEPTFSWTKDGNPFYFTDHRIIPSNNSGTFRIPNEGHISHFQGKYRCFASN 113

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKP 165
            +G A S  I+  V + P F  E  + +   E + +   C    GLP   I+W++   + 
Sbjct: 114 KLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEH 173

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-NSLGYVYKDVYVNVLAHA----- 218
           I Q       + G   +   N+ + D+ N Y C A    L  + + + + +  ++     
Sbjct: 174 IEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNSIK 231

Query: 219 ---PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILET 269
              P++   P +  +      + G+ ++L C   G P P+V+W     +L  GR T    
Sbjct: 232 QRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKGRETKENY 291

Query: 270 GD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           G  LKI +V++ D G Y C A N LGTA     + V+E    T +P+      G +    
Sbjct: 292 GKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKKPQSAVYSTGSNGILL 351

Query: 329 CNAVSDPSLKLSIVWLRGSEPID---------FESEPRF--VQSNDYSLTVTKSSELDSG 377
           C A  +P  + +I W     P+D         F  E  F  +Q N  ++   ++S +   
Sbjct: 352 CEAEGEP--QPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHG- 408

Query: 378 QYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDAKKAVVSWNPV 426
             T  A   +D ++ +  +  +       +   S F   +   + +AVVSW  V
Sbjct: 409 --TILANANIDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV 460



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 111/293 (37%), Gaps = 31/293 (10%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKP--ISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +E    EC+A G PEP   W  +G P   +     P    G  RI  E       G Y C
Sbjct: 50  DEYFQIECEAKGNPEPTFSWTKDGNPFYFTDHRIIPSNNSGTFRIPNEGHISHFQGKYRC 109

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN 255
            A+N LG    +    ++   P+  +   D   V +G  +VL C    G P   + W++ 
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNI 169

Query: 256 QKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTH 309
           + E      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV     
Sbjct: 170 ELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNS 229

Query: 310 ITDQ-------PEDYEVEA------GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           I  +       P +   E+      G+     C A   P+ ++    + G  P   E++ 
Sbjct: 230 IKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKGRETKE 289

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFT 409
            + +    +L +   S  D G Y C A   L      AT    V +E P  +T
Sbjct: 290 NYGK----TLKIENVSYQDKGNYRCTASNFL----GTATHDFHVIVEEPPRWT 334


>gi|27894376|ref|NP_006605.2| neural cell adhesion molecule L1-like protein isoform 1 precursor
           [Homo sapiens]
          Length = 1224

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 177/713 (24%), Positives = 297/713 (41%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 269 LKGEILLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYGKTLKIENVSYQDKGNYRCT 327

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG P
Sbjct: 328 ASNFLGTA-THDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 386

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +   P      V P  I+  NL+ + T  Y C A+N  G +  +  ++V+   P I    
Sbjct: 387 VDNHP-FAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQTKD 445

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            + Y TV G +  L C  F +P+  V+W  +   K L G RY I E G L+I      D+
Sbjct: 446 GENYATVVGYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDA 505

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L 
Sbjct: 506 GSYSCWVENAIGKTAVTANLDIRNATKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLK 565

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y C A T LD       +TV 
Sbjct: 566 LSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVL 625

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +  +   +   Y V+    K+  G   EL   +
Sbjct: 626 DVPDPPENLHLSERQN-RSVRLTWEAGADHN--SNISEYIVEFEGNKEEPGRWEELTRVQ 682

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 683 GKKTTV-ILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 741

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 742 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 792

Query: 576 T--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G + + +  Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 793 VYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKD 852

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ +++        
Sbjct: 853 RVHGRLKGYQINW--------WKTKSLLDGRT-----------HPKEVNILRF------- 886

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 887 ---------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTPEG 930



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 140/651 (21%), Positives = 250/651 (38%), Gaps = 77/651 (11%)

Query: 54  FCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113
           +C F   P  +TI  K  +P+              L +  ++ ++  S + E+ +     
Sbjct: 202 YCCFAAFPRLRTIVQK--MPMK-------------LTVNSLKHANDSSSSTEIGSKANSI 246

Query: 114 KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           K     L  L  P  +     I   + E +  EC A GLP P++ W   G  + +     
Sbjct: 247 KQRKPKL--LLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKG---- 300

Query: 174 RRKVGPN---RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
            R+   N    + IEN+   D GNY C A+N LG    D +V ++   P  T+ P+    
Sbjct: 301 -RETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHV-IVEEPPRWTKKPQSAVY 358

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCF 288
             G   +L C   G P+P + W  N   +    +   ++   ++  T++    +  Y C 
Sbjct: 359 STGSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCE 418

Query: 289 ARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           A N  GT   + ++ V +   +  T   E+Y    G SA   C   + P   +S  W + 
Sbjct: 419 ASNVHGTILANANIDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS--WQKV 476

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPS 406
            E    E     +  N  +L + +++E D+G Y+C  +  +      A L ++       
Sbjct: 477 EEVKPLEGRRYHIYENG-TLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR------- 528

Query: 407 NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGES---T 463
                   +A K  VS  P +P+  + H      ++  +   + S++      GE+    
Sbjct: 529 --------NATKLRVS--PKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDGEAFEIN 578

Query: 464 TTEVDKFVPASKNFA---RVLAFNGAYNGPP------SEIISFVTPEGVPGTVQSLEAIP 514
            TE  + +    N       L   G Y          +  I+ VT   VP   ++L    
Sbjct: 579 GTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSE 638

Query: 515 LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLE 573
             + +  L W      N  +  Y ++++   G K  P   E L  +    TT   +  L 
Sbjct: 639 RQNRSVRLTWEAGADHNSNISEYIVEFE---GNKEEPGRWEELTRVQGKKTTV--ILPLA 693

Query: 574 PSTKYRIHLAGYTKAGDGAESKYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPE 627
           P  +Y+  +    + G    S+   +       P +NP N+  + S P  ++I W  +  
Sbjct: 694 PFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKS 753

Query: 628 IEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           +E N P  +YR+ W+       W ++ V +     L +     + PY++KV
Sbjct: 754 MEQNGPGLEYRVTWKPQGAPVEWEEETVTN---HTLRVMTPAVYAPYDVKV 801



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 128/539 (23%), Positives = 223/539 (41%), Gaps = 49/539 (9%)

Query: 88   SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
            +L I      D GSY+C V N +G+  + + +L +  A    V P+     +   +   C
Sbjct: 494  TLQINRTTEEDAGSYSCWVENAIGKT-AVTANLDIRNATKLRVSPKNPRIPKLHMLELHC 552

Query: 148  KA---SGLPEP-EIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202
            ++   S L    ++ W  +G+        + R  +    +TI N+   D G Y C+A  +
Sbjct: 553  ESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTA 612

Query: 203  LGYVYKDVYVNVLAHAPEITEAPKDEYTVD--GKTVVLTCRVFGAPKPE------VNWIH 254
            L        V VL    ++ + P++ +  +   ++V LT    GA          V +  
Sbjct: 613  LDSAADITQVTVL----DVPDPPENLHLSERQNRSVRLTWEA-GADHNSNISEYIVEFEG 667

Query: 255  NQKELTGGRYTILETGDLKITDVAFADSG----EYTCFARNKLGTAQGSGSLTVKEHTHI 310
            N++E   GR+  L     K T V    +     ++   A N++G +Q S      E    
Sbjct: 668  NKEE--PGRWEELTRVQGKKTTVILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPA 725

Query: 311  T--DQPEDYEVEAGQSAT-------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS 361
                 P++  V+A Q           +    + P L+  + W     P+++E E      
Sbjct: 726  APDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TV 781

Query: 362  NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKK 418
             +++L V   +         +A  +L       ++T+    + P    +I    VI++  
Sbjct: 782  TNHTLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTL 841

Query: 419  AVVSWNPVSPQSLRGHFRGYKVQTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPA 473
              V+W+ V    + G  +GY++  W  K   DG    +E+ + +  G+  +  V      
Sbjct: 842  VKVTWSTVPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAF 901

Query: 474  SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV 533
            S+    VLA+N    GP SE   F TPEGVP     L+ I +      L W  P++ NG 
Sbjct: 902  SEFHLTVLAYNSKGAGPESEPYIFQTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGN 961

Query: 534  LMGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            L GY ++YQ +  T ++G L +    I+ P+  S  L+ L  +TKY+ +L   T  G G
Sbjct: 962  LTGYLLQYQIINDTYEIGELNDI--NITTPSKPSWHLSNLNATTKYKFYLRACTSQGCG 1018



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 170/430 (39%), Gaps = 62/430 (14%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P   W+KDG P   +D   I   N G   I      S  QG Y C  SN
Sbjct: 54  QIECEAKGNPEPTFSWTKDGNPFYFTDHRIIPSNNSGTFRIPNEGHISHFQGKYRCFASN 113

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKP 165
            +G A S  I+  V + P F  E  + +   E + +   C    GLP   I+W++   + 
Sbjct: 114 KLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEH 173

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA- 218
           I Q       + G   +   N+ + D+ N Y C A        +  +   + VN L HA 
Sbjct: 174 IEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHAN 231

Query: 219 -------------------PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWI 253
                              P++   P +  +      + G+ ++L C   G P P+V+W 
Sbjct: 232 DSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWN 291

Query: 254 HNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD 312
               +L  GR T    G  LKI +V++ D G Y C A N LGTA     + V+E    T 
Sbjct: 292 KIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTK 351

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID---------FESEPRF--VQS 361
           +P+      G +    C A  +P  + +I W     P+D         F  E  F  +Q 
Sbjct: 352 KPQSAVYSTGSNGILLCEAEGEP--QPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQP 409

Query: 362 NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDA 416
           N  ++   ++S +     T  A   +D ++ +  +  +       +   S F   +   +
Sbjct: 410 NHTAVYQCEASNVHG---TILANANIDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFAS 466

Query: 417 KKAVVSWNPV 426
            +AVVSW  V
Sbjct: 467 PEAVVSWQKV 476



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 112/309 (36%), Gaps = 47/309 (15%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKP--ISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +E    EC+A G PEP   W  +G P   +     P    G  RI  E       G Y C
Sbjct: 50  DEYFQIECEAKGNPEPTFSWTKDGNPFYFTDHRIIPSNNSGTFRIPNEGHISHFQGKYRC 109

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN 255
            A+N LG    +    ++   P+  +   D   V +G  +VL C    G P   + W++ 
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNI 169

Query: 256 QKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTH 309
           + E      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV    H
Sbjct: 170 ELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKH 229

Query: 310 ITDQPEDYEV-------------------EAGQSAT----------FRCNAVSDPSLKLS 340
             D     E+                   E+G  ++            C A   P+ ++ 
Sbjct: 230 ANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVD 289

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
              + G  P   E++  + +    +L +   S  D G Y C A   L      AT    V
Sbjct: 290 WNKIGGDLPKGRETKENYGK----TLKIENVSYQDKGNYRCTASNFL----GTATHDFHV 341

Query: 401 PLEAPSNFT 409
            +E P  +T
Sbjct: 342 IVEEPPRWT 350


>gi|149714159|ref|XP_001487987.1| PREDICTED: contactin-1 isoform 1 [Equus caballus]
          Length = 1019

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 187/727 (25%), Positives = 297/727 (40%), Gaps = 88/727 (12%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 242 PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 299

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G+Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 300 NIQLEDEGTYECEAENIRGKDKHHG-RIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 355

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 356 TGKPIPTIRWLKNGYSYHKG------ELRLYDVTFEN-----AGMYQCIAENTHGVIYAN 404

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 405 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 464

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 465 WEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENAT 524

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ +W      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 525 MQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 584

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            AQT +D   A A L V+ P   P     I+ I A    ++W+  S          Y +Q
Sbjct: 585 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYSIQ 641

Query: 442 TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           T T    D + +  +  + +G          +P  +   RV+A N    G PS   + + 
Sbjct: 642 TKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIK 701

Query: 500 PEGVPGTVQSLEAIPLGSS--AFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
            +G    V   +    G S     + W  +  E   G   GY + ++   G +   +   
Sbjct: 702 TDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVT 761

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTP 615
            P   D      K   + PST +++ +  +   GDG         P+             
Sbjct: 762 NP---DTGRYVHKDETMRPSTAFQVKVKAFNNKGDG---------PY------------- 796

Query: 616 NNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVL----ANQPTF 671
                S TA+     +AP              EA  +  V     SE+ +      +   
Sbjct: 797 -----SLTAVINSAQDAP-------------SEAPAEVGVKVLSSSEISVHWEHVVEKIV 838

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
           + Y+I+    W+  D E +   + V   E  +  ++  +P ++ F  V A N A  GPPS
Sbjct: 839 ESYQIRY---WSAHDKEAAAHRVQVTSQE-YSARLENLLPDTQYFVEVRACNSAGCGPPS 894

Query: 732 EIISFVT 738
           ++I   T
Sbjct: 895 DMIETFT 901



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 156/662 (23%), Positives = 250/662 (37%), Gaps = 95/662 (14%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 190 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTKPYPADIVV 247

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  + A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 248 QFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 304

Query: 191 DTGNYGCNATNSLGYVYKD-----VYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
           D G Y C A N  G   KD     +YV      PE  E   D     G  +   C   G 
Sbjct: 305 DEGTYECEAENIRG---KDKHHGRIYVQAF---PEWVEHINDTEVDIGSDLYWPCVATGK 358

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           P P + W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L + 
Sbjct: 359 PIPTIRWLKN-----GYSY---HKGELRLYDVTFENAGMYQCIAENTHGVIYANAELKIL 410

Query: 306 EHTHITDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
                 +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   
Sbjct: 411 ALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWE 466

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KK 418
           D SL +   +  D G YTC A+       +  TL +  P   + AP N  +    +A  +
Sbjct: 467 DGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENATMQ 526

Query: 419 AVVSWNPVSPQSLRGHFRGYKV-----------QTWTEKDGEGSIRELIVNKGESTTTEV 467
              S++P    +    F GY +               + +GE  IR   +      T   
Sbjct: 527 CAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTA 586

Query: 468 DKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKP 527
              V  S   A ++                    G PG    L    + +++  L W + 
Sbjct: 587 QTIVDNSSASADLVV------------------RGPPGPPGGLRIEDIRATSVALTWSRG 628

Query: 528 EQPNGVLMGYKIKYQSV-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
              +  +  Y I+ +++     K  K  P     P I +    +A+   L P  +Y   +
Sbjct: 629 SDNHSPISKYSIQTKTILSDDWKDAKTDP-----PII-EGNMEAARAVDLIPWMEYEFRV 682

Query: 583 AGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
                 G G  S      K     P   P +V G G +   L I+W  +    H   +F 
Sbjct: 683 VATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNNFG 742

Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
           Y + ++  + GE W +  V +      V  ++ T +P   +++KV     + DG  S+  
Sbjct: 743 YIVAFKPFD-GEEWKKVTVTNPDTGRYVHKDE-TMRPSTAFQVKVKAFNNKGDGPYSLTA 800

Query: 694 LI 695
           +I
Sbjct: 801 VI 802



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 141/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   ++  SDR S    G +L+I + +   D G Y C  S
Sbjct: 61  KVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 118

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 119 NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 172

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 173 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 229

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 230 LIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 289

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +  G + V+      +   D EV+ G   
Sbjct: 290 STSGAVLKIFNIQLEDEGTYECEAENIRGKDKHHGRIYVQAFPEWVEHINDTEVDIGSDL 349

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+       + E R      Y +T       ++G Y C A+ 
Sbjct: 350 YWPCVATGKPI--PTIRWLKNGYSY-HKGELRL-----YDVTFE-----NAGMYQCIAEN 396

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 397 THGVIYANAELKI 409



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 104/276 (37%), Gaps = 26/276 (9%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   +     +    VG N +   
Sbjct: 48  PINTIYPE---ESPEGKVSLNCRARASPFPVYKWRMNNGDVDLTS-DRYSMVGGNLVINN 103

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   +
Sbjct: 104 PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 163

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 164 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 223

Query: 299 SGSL---------TVKEH-THITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                        T K +   I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 224 FSKFIPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV--PDIRWRKVLE 281

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           P+   +E   + ++   L +      D G Y C A+
Sbjct: 282 PMPSTAE---ISTSGAVLKIFNIQLEDEGTYECEAE 314



 Score = 43.9 bits (102), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+    ++V+ + +  V W  V  + +      Y+++ W+  D E +   + V   
Sbjct: 809 PSEAPAEVG-VKVLSSSEISVHWEHVVEKIVES----YQIRYWSAHDKEAAAHRVQVTSQ 863

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GPPS++I   T +  P     + +     S +
Sbjct: 864 E-YSARLENLLPDTQYFVEVRACNSAGCGPPSDMIETFTKKAPPSQPPRIISSIRSGSRY 922

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYK+ Y+
Sbjct: 923 IITWDHVVALSNESTVTGYKVLYR 946


>gi|62088238|dbj|BAD92566.1| Neural cell adhesion molecule variant [Homo sapiens]
          Length = 1210

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 177/713 (24%), Positives = 297/713 (41%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 255 LKGEILLLECFAEGLPTPQVDWNKIGGDL-PKGREAKENYGKTLKIENVSYQDKGNYRCT 313

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG P
Sbjct: 314 ASNFLGTA-THDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 372

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +   P      V P  I+  NL+ + T  Y C A+N  G +  +  ++V+   P I    
Sbjct: 373 VDNHP-FAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQTKD 431

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            + Y TV G +  L C  F +P+  V+W  +   K L G RY I E G L+I      D+
Sbjct: 432 GENYATVVGYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDA 491

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L 
Sbjct: 492 GSYSCWVENAIGKTAVTANLDIRNATKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLK 551

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y C A T LD       +TV 
Sbjct: 552 LSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVL 611

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +  +   +   Y V+    K+  G   EL   +
Sbjct: 612 DVPDPPENLHLSERQN-RSVRLTWEAGADHN--SNISEYIVEFEGNKEEPGRWEELTRVQ 668

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 669 GKKTTV-ILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 727

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 728 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 778

Query: 576 T--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G + + +  Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 779 VYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKD 838

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ +++        
Sbjct: 839 RVHGRLKGYQINW--------WKTKSLLDGRT-----------HPKEVNILRF------- 872

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 873 ---------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTPEG 916



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 124/567 (21%), Positives = 222/567 (39%), Gaps = 54/567 (9%)

Query: 135 INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSD 191
           I   + E +  EC A GLP P++ W   G  + +      R+   N    + IEN+   D
Sbjct: 252 ITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKG-----REAKENYGKTLKIENVSYQD 306

Query: 192 TGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVN 251
            GNY C A+N LG    D +V ++   P  T+ P+      G   +L C   G P+P + 
Sbjct: 307 KGNYRCTASNFLGTATHDFHV-IVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIK 365

Query: 252 WIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH 309
           W  N   +    +   ++   ++  T++    +  Y C A N  GT   + ++ V +   
Sbjct: 366 WRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRP 425

Query: 310 I--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
           +  T   E+Y    G SA   C   + P   +S  W +  E    E     +  N  +L 
Sbjct: 426 LIQTKDGENYATVVGYSAFLHCEFFASPEAVVS--WQKVEEVKPLEGRRYHIYENG-TLQ 482

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPV- 426
           + +++E D+G Y+C  +  +      A L ++       N T ++V      +   + + 
Sbjct: 483 INRTTEEDAGSYSCWVENAIGKTAVTANLDIR-------NATKLRVSPKNPRIPKLHMLE 535

Query: 427 --SPQSLRGHFRGYKVQTWTEKDGEG------SIRELIVNKGESTTTEVDKFVPASKNFA 478
                    H +     +W+ KDGE           +I++    T + V          +
Sbjct: 536 LHCESKCDSHLKHSLKLSWS-KDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCS 594

Query: 479 RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
              A + A +      I+ VT   VP   ++L      + +  L W      N  +  Y 
Sbjct: 595 AHTALDSAAD------ITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGADHNSNISEYI 648

Query: 539 IKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL 597
           ++++   G K  P   E L  +    TT   +  L P  +Y+  +    + G    S+  
Sbjct: 649 VEFE---GNKEEPGRWEELTRVQGKKTTV--ILPLAPFVRYQFRVIAVNEVGRSQPSQPS 703

Query: 598 FY------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWN 651
            +       P +NP N+  + S P  ++I W  +  +E N P  +YR+ W+       W 
Sbjct: 704 DHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWE 763

Query: 652 QDDVLDWRQSELVLANQPTFQPYEIKV 678
           ++ V +     L +     + PY++KV
Sbjct: 764 EETVTN---HTLRVMTPAVYAPYDVKV 787



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 128/539 (23%), Positives = 223/539 (41%), Gaps = 49/539 (9%)

Query: 88   SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
            +L I      D GSY+C V N +G+  + + +L +  A    V P+     +   +   C
Sbjct: 480  TLQINRTTEEDAGSYSCWVENAIGKT-AVTANLDIRNATKLRVSPKNPRIPKLHMLELHC 538

Query: 148  KA---SGLPEP-EIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202
            ++   S L    ++ W  +G+        + R  +    +TI N+   D G Y C+A  +
Sbjct: 539  ESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTA 598

Query: 203  LGYVYKDVYVNVLAHAPEITEAPKDEYTVD--GKTVVLTCRVFGAPKPE------VNWIH 254
            L        V VL    ++ + P++ +  +   ++V LT    GA          V +  
Sbjct: 599  LDSAADITQVTVL----DVPDPPENLHLSERQNRSVRLTWEA-GADHNSNISEYIVEFEG 653

Query: 255  NQKELTGGRYTILETGDLKITDVAFADSG----EYTCFARNKLGTAQGSGSLTVKEHTHI 310
            N++E   GR+  L     K T V    +     ++   A N++G +Q S      E    
Sbjct: 654  NKEE--PGRWEELTRVQGKKTTVILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPA 711

Query: 311  T--DQPEDYEVEAGQSAT-------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS 361
                 P++  V+A Q           +    + P L+  + W     P+++E E      
Sbjct: 712  APDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TV 767

Query: 362  NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKK 418
             +++L V   +         +A  +L       ++T+    + P    +I    VI++  
Sbjct: 768  TNHTLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTL 827

Query: 419  AVVSWNPVSPQSLRGHFRGYKVQTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPA 473
              V+W+ V    + G  +GY++  W  K   DG    +E+ + +  G+  +  V      
Sbjct: 828  VKVTWSTVPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAF 887

Query: 474  SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV 533
            S+    VLA+N    GP SE   F TPEGVP     L+ I +      L W  P++ NG 
Sbjct: 888  SEFHLTVLAYNSKGAGPESEPYIFQTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGN 947

Query: 534  LMGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            L GY ++YQ +  T ++G L +    I+ P+  S  L+ L  +TKY+ +L   T  G G
Sbjct: 948  LTGYLLQYQIINDTYEIGELNDI--NITTPSKPSWHLSNLNATTKYKFYLRACTSQGCG 1004



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 103/414 (24%), Positives = 169/414 (40%), Gaps = 46/414 (11%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P   W+KDG P   +D   I   N G   I      S  QG Y C  SN
Sbjct: 56  QIECEAKGNPEPTFSWTKDGNPFYFTDHRIIPSNNSGTFRIPNEGHISHFQGKYRCFASN 115

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKP 165
            +G A S  I+  V + P F  E  + +   E + +   C    GLP   I+W++   + 
Sbjct: 116 KLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEH 175

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-NSLGYVYKDVYVNVLAHA----- 218
           I Q       + G   +   N+ + D+ N Y C A    L  + + + + +  ++     
Sbjct: 176 IEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNSIK 233

Query: 219 ---PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILET 269
              P++   P +  +      + G+ ++L C   G P P+V+W     +L  GR      
Sbjct: 234 QRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKGREAKENY 293

Query: 270 GD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
           G  LKI +V++ D G Y C A N LGTA     + V+E    T +P+      G +    
Sbjct: 294 GKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKKPQSAVYSTGSNGILL 353

Query: 329 CNAVSDPSLKLSIVWLRGSEPID---------FESEPRF--VQSNDYSLTVTKSSELDSG 377
           C A  +P  + +I W     P+D         F  E  F  +Q N  ++   ++S +   
Sbjct: 354 CEAEGEP--QPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHG- 410

Query: 378 QYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDAKKAVVSWNPV 426
             T  A   +D ++ +  +  +       +   S F   +   + +AVVSW  V
Sbjct: 411 --TILANANIDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV 462



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 111/293 (37%), Gaps = 31/293 (10%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKP--ISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +E    EC+A G PEP   W  +G P   +     P    G  RI  E       G Y C
Sbjct: 52  DEYFQIECEAKGNPEPTFSWTKDGNPFYFTDHRIIPSNNSGTFRIPNEGHISHFQGKYRC 111

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN 255
            A+N LG    +    ++   P+  +   D   V +G  +VL C    G P   + W++ 
Sbjct: 112 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNI 171

Query: 256 QKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTH 309
           + E      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV     
Sbjct: 172 ELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNS 231

Query: 310 ITDQ-------PEDYEVEA------GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
           I  +       P +   E+      G+     C A   P+ ++    + G  P   E++ 
Sbjct: 232 IKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKGREAKE 291

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFT 409
            + +    +L +   S  D G Y C A   L      AT    V +E P  +T
Sbjct: 292 NYGK----TLKIENVSYQDKGNYRCTASNFL----GTATHDFHVIVEEPPRWT 336


>gi|328699654|ref|XP_001952435.2| PREDICTED: protein sidekick-like isoform 1 [Acyrthosiphon pisum]
          Length = 2158

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 149/529 (28%), Positives = 233/529 (44%), Gaps = 39/529 (7%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPI---NPSDRISQGNYGKSLIIKHV 94
           + K +   +K  EL CI    PL +  T+W KD +PI   N  D I    + ++L + + 
Sbjct: 240 KGKHIIKGHKTTELQCIANARPLHELGTLWFKDDIPIENTNGVDYIYNDPWNRTLSLINA 299

Query: 95  EFSDQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEE-ETVTFECKASG 151
           + +  G YTC++   +G     S   D+ VL  P F          E   TV   C   G
Sbjct: 300 KLTYTGRYTCQIRFVSGGYAPISADADIFVLEPPTFVGNLRMETLGEYGSTVRISCDTIG 359

Query: 152 LPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDV 210
           +P+P+I W  N + ISQ   N R  V  +  + I+ L   D+G + C A N  G      
Sbjct: 360 VPQPKITWYRNAETISQ---NNRYIVEEDGTLVIKKLNIEDSGMFQCEAENEAGTDSIST 416

Query: 211 YVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILET 269
           ++ V    P I   P++   ++G  V+L+CRV GAPKP   W      ++   R  IL+T
Sbjct: 417 WLKVKTTGPIIENEPQNSTVLEGNEVILSCRVIGAPKPNTTWTFGDLFVSLNERIRILDT 476

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           GDL I+     D+G+Y+C   N+ GT +    + V   T I + P D  V  GQ++  +C
Sbjct: 477 GDLFISSTKVQDTGKYSCIRSNEAGTVEMHAYIKVLGKTTIVEPPMDTRVLLGQNSIMKC 536

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
              SDPS+   I W   ++ +      R   S D +L +      D+G YTC   +    
Sbjct: 537 KVSSDPSVLYQIDWFHNNKSLG-AGNSRIKVSADGTLEIGVVRAGDAGVYTCSVSSPGGN 595

Query: 390 IEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHFRGYKVQT 442
               A L++ + L  P N    + +  +   VSW       +P+    L+   +  +++T
Sbjct: 596 ERRHAHLSI-LELPYPPNVAQAERVGPRSVNVSWTVGFDGNSPI----LKYIVQKRQIET 650

Query: 443 WTEKDGEGS-IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT-- 499
            +  D     + EL      S    ++    A+    R+ A N    G PS+  +FVT  
Sbjct: 651 QSLLDPLVDWVTELTNISANSRYVVLENLKAANTYQFRISAMNAIGEGTPSQPSNFVTLP 710

Query: 500 ---PEGVP-GTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQ 542
              P G P G V S  +    +S    +W  P  E  NG ++GY I+Y+
Sbjct: 711 QQAPSGPPLGFVGSARS----NSEIITQWQPPLEEHHNGQILGYIIRYR 755



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 120/281 (42%), Gaps = 29/281 (10%)

Query: 421  VSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIR----ELIVNKGESTTTEVDKFVPAS 474
            V+W P+ PQ   G  +  GYKV      D   +++    ++I+   E T   +   V   
Sbjct: 1537 VTWEPIPPQYWNGDTQTGGYKVLYQPVSDIPMALQTIPSQMIIGTTEKTLV-IGDLVRDR 1595

Query: 475  KNFARVLAFNGAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWVKPEQ--PN 531
                 V+ FN   NGPPS  I     E VP G  +S+ A  + S+   L W  P+Q   N
Sbjct: 1596 NYDIIVVPFNSQGNGPPSMPIPVYVGEAVPTGEPRSVSAFAISSTEVRLSWEHPQQNQQN 1655

Query: 532  GVLMGYKIKY---QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
            G L+GYKI Y    S    +V    E +P     T  S  L  L+  T+Y+I +  +  A
Sbjct: 1656 GDLLGYKIFYIVTDSPNEHRVEEETEVVP----ATYISHSLVFLDKYTEYKIQILAFNPA 1711

Query: 589  GDGAESKYLFYVPFKN----PDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
            GDG  S  +     +     P +++    T N+L +SWT  P    N     Y I +   
Sbjct: 1712 GDGPRSAPIIVRTHQGVPGPPTDLQFSEITMNSLKVSWT--PPKRKNGQLLGYIITYETA 1769

Query: 645  NTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEK 685
               E +++       Q+ L++      QP E +V  T++ +
Sbjct: 1770 EQNERFSKQVKQRVNQTWLLV------QPLEEEVTYTFSVR 1804



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/282 (21%), Positives = 119/282 (42%), Gaps = 31/282 (10%)

Query: 125 APYFTVEPEFIN--AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
           AP F  +P        E +T   +C+A G P P   W  +GK +       +        
Sbjct: 40  APRFITQPTSTKNVIGEGQTKIIQCQALGFPAPVYKWYKDGKELGDFSSEYQ------SF 93

Query: 183 TIENLRKSDTGNYGCNATNSLGYVY-KDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTC 240
            + NL+  D G Y C A N +G +  + + +N+ A+     E       V+ G+  +L C
Sbjct: 94  RLLNLKHDDGGTYQCIAKNEVGSILSQKIEINI-AYMENFMEVTDPIVRVERGQAAILDC 152

Query: 241 -RVFGAPKPEVNWIHNQ-KELTGGRY-TILETGDLKITDVAFADSGEYTCFARN------ 291
             +   P P V W+ +   +L   +Y ++ ET  L +   + +D   Y   A N      
Sbjct: 153 PPIKSYPPPMVQWLTDDGTQLYDIKYASVAETHQLVVLSASDSDQKAYRVRATNPLLGKD 212

Query: 292 ------KLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT-FRCNAVSDPSLKLSIVWL 344
                 ++ T  GS S  +  +  +  +P+   +  G   T  +C A + P  +L  +W 
Sbjct: 213 EFSQYLRINTIGGSQSGEIAPYFVV--KPKGKHIIKGHKTTELQCIANARPLHELGTLWF 270

Query: 345 RGSEPIDFESEPRFVQSNDY--SLTVTKSSELDSGQYTCRAQ 384
           +   PI+  +   ++ ++ +  +L++  +    +G+YTC+ +
Sbjct: 271 KDDIPIENTNGVDYIYNDPWNRTLSLINAKLTYTGRYTCQIR 312



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 84/198 (42%), Gaps = 16/198 (8%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP +  + + I++    V W P  PQ + G  +GYK+Q W    GE    E+ V  
Sbjct: 815  VPEAAPID-VIARPINSTSVQVWWKPPDPQKINGINQGYKLQAWI---GERVEHEMTVAP 870

Query: 460  ------GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAI 513
                   + TTT V+     + N   VL F    +GP S     VT E VP  V SL   
Sbjct: 871  SLFDPLAQQTTTFVNLRKFTAYNVT-VLCFTDPGDGPISSPSLVVTHEDVPDLVGSLHFE 929

Query: 514  PLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLE 573
             +   +  + W  P   NG L+ Y + Y      +   L+      SD   TS  +  L+
Sbjct: 930  DVSDRSVNVVWSSPLHTNGHLITYTVSYSIRDRPETTHLVN---VTSD--ITSIVIDQLQ 984

Query: 574  PSTKYRIHLAGYTKAGDG 591
             +T Y+  +  +TK G G
Sbjct: 985  ATTHYKFEVFAWTKVGPG 1002



 Score = 46.6 bits (109), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 12/149 (8%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG----SIREL 455
            VP   P N  +     +   VVSW  V      G   G+KV  + +  G       I+++
Sbjct: 1216 VPSMGPIN-VIANATSSTTIVVSWGDVPCDHRNGIVEGFKV--YYKPGGRAVYPVQIKDI 1272

Query: 456  IVNKGESTT-TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLEAI 513
              N   +TT TE+ KFV  S    +VLA++   +G  S  I+ V T E VPGT  ++   
Sbjct: 1273 PKNSTFTTTLTELKKFVQYS---IQVLAYSRLGDGVLSTPITRVQTFEDVPGTPSNVSFP 1329

Query: 514  PLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
             + S+   + W  P  PNG ++ Y+I YQ
Sbjct: 1330 DVTSTTARIIWDVPADPNGEILAYRINYQ 1358



 Score = 46.2 bits (108), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 73/179 (40%), Gaps = 17/179 (9%)

Query: 217 HAPEITEAPKDEYTV--DGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKI 274
            AP     P     V  +G+T ++ C+  G P P   W  + KEL  G ++  E    ++
Sbjct: 39  QAPRFITQPTSTKNVIGEGQTKIIQCQALGFPAPVYKWYKDGKEL--GDFS-SEYQSFRL 95

Query: 275 TDVAFADSGEYTCFARNKLGTAQGS----GSLTVKEHTHITDQPEDYEVEAGQSATFRCN 330
            ++   D G Y C A+N++G+            ++    +TD      VE GQ+A   C 
Sbjct: 96  LNLKHDDGGTYQCIAKNEVGSILSQKIEINIAYMENFMEVTD--PIVRVERGQAAILDCP 153

Query: 331 AVSDPSLKLSIVWLR--GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            +      + + WL   G++  D +       +  + L V  +S+ D   Y  RA   L
Sbjct: 154 PIKSYPPPM-VQWLTDDGTQLYDIKYAS---VAETHQLVVLSASDSDQKAYRVRATNPL 208



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 110/265 (41%), Gaps = 20/265 (7%)

Query: 397  TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
            T+Q P   P     ++ + + +  V W P+      G+ +GY +           +  + 
Sbjct: 1112 TIQAPPAHPPYNVTVRAMSSTELRVRWIPLQQSEWFGNGKGYNIT--YRLLNTSVVYTVT 1169

Query: 457  VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVP--GTVQSLEAIP 514
            +    S +  +D     ++    + AFN   +  PS      T E VP  G +  + A  
Sbjct: 1170 IEDITSNSFVLDSLQKFTQYDVTMNAFNDVGSSGPSPPAFERTRESVPSMGPINVI-ANA 1228

Query: 515  LGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPL-LERLPYISDPTTTSAKLAG 571
              S+   + W  V  +  NG++ G+K+ Y+   G  V P+ ++ +P  S  TTT   L  
Sbjct: 1229 TSSTTIVVSWGDVPCDHRNGIVEGFKVYYKP-GGRAVYPVQIKDIPKNSTFTTT---LTE 1284

Query: 572  LEPSTKYRIHLAGYTKAGDGAESKYLFYV-PFKN----PDNVEGRGSTPNNLVISWTAMP 626
            L+   +Y I +  Y++ GDG  S  +  V  F++    P NV     T     I W    
Sbjct: 1285 LKKFVQYSIQVLAYSRLGDGVLSTPITRVQTFEDVPGTPSNVSFPDVTSTTARIIWDV-- 1342

Query: 627  EIEHNAPHFKYRIFWRRHNTGEAWN 651
              + N     YRI ++ H++ E +N
Sbjct: 1343 PADPNGEILAYRINYQLHSS-EGYN 1366


>gi|114645302|ref|XP_509005.2| PREDICTED: contactin-1 isoform 12 [Pan troglodytes]
 gi|410352791|gb|JAA42999.1| contactin 1 [Pan troglodytes]
          Length = 1018

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 185/728 (25%), Positives = 294/728 (40%), Gaps = 90/728 (12%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 241 PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 298

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 299 NIQLEDEGIYECEAENIRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 354

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 355 TGKPIPTIRWLKNGYAYHKG------ELRLYDVTFEN-----AGMYQCIAENTYGAIYAN 403

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 404 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 463

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 464 WEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENAT 523

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ VW      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 524 MQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 583

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            AQT +D   A A L V+ P   P     I+ I A    ++W+  S          Y +Q
Sbjct: 584 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYTIQ 640

Query: 442 TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           T T    D + +  +  + +G          +P  +   RV+A N    G PS   + + 
Sbjct: 641 TKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNRIK 700

Query: 500 PEGVPGTVQSLEAIPLG--SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
            +G    V   +    G  +    + W  +  E   G   GY + ++   G +   +   
Sbjct: 701 TDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVT 760

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEG 610
            P   D      K   + PST +++ +  +   GDG  S           P + P  V  
Sbjct: 761 NP---DTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGA 817

Query: 611 RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT 670
           +  + + + + W  +  +E     ++ R +W  H+  EA N+  V              T
Sbjct: 818 KVLSSSEISVHWEHV--LEKIVESYQIR-YWAAHDKEEAANRVQV--------------T 860

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
            Q Y                            +  ++  +P ++ F  V A N A  GPP
Sbjct: 861 SQEY----------------------------SARLENLLPDTQYFIEVGACNSAGCGPP 892

Query: 731 SEIISFVT 738
           S++I   T
Sbjct: 893 SDMIEAFT 900



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 154/657 (23%), Positives = 246/657 (37%), Gaps = 85/657 (12%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 189 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVV 246

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  + A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 247 QFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 303

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N  G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 304 DEGIYECEAENIRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 362

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 363 RWLKN-----GYAY---HKGELRLYDVTFENAGMYQCIAENTYGAIYANAELKILALAPT 414

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   D SL 
Sbjct: 415 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 470

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC A+       +  TL +  P   + AP N  +    +A  +   S+
Sbjct: 471 INNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASF 530

Query: 424 NPVSPQSLRGHFRGYKVQ-----------TWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
           +P    +    F GY +               + +GE  IR   +      T      V 
Sbjct: 531 DPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVD 590

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
            S   A ++                    G PG    L    + +++  L W +    + 
Sbjct: 591 NSSASADLVV------------------RGPPGPPGGLRIEDIRATSVALTWSRGSDNHS 632

Query: 533 VLMGYKIKYQSV-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
            +  Y I+ +++     K  K  P     P I +    +A+   L P  +Y   +     
Sbjct: 633 PISKYTIQTKTILSDDWKDAKTDP-----PII-EGNMEAARAVDLIPWMEYEFRVVATNT 686

Query: 588 AGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            G G  S      K     P   P +V G G     L I+W  +    H   +F Y + +
Sbjct: 687 LGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAF 746

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
           +  + GE W +  V +      V  ++ T  P   +++KV     + DG  S+  +I
Sbjct: 747 KPFD-GEEWKKVTVTNPDTGRYVHKDE-TMSPSTAFQVKVKAFNNKGDGPYSLVAVI 801



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 140/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   ++  SDR S    G +L+I + +   D G Y C  S
Sbjct: 60  KVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 117

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 118 NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 171

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 172 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 228

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 229 LIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 288

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 289 STSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 348

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+       + E R      Y +T       ++G Y C A+ 
Sbjct: 349 YWPCVATGKPI--PTIRWLKNGYAY-HKGELRL-----YDVTFE-----NAGMYQCIAEN 395

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 396 TYGAIYANAELKI 408



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   +     +    VG N +   
Sbjct: 47  PINTIYPE---ESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTS-DRYSMVGGNLVINN 102

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   +
Sbjct: 103 PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 162

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 163 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 222

Query: 299 SGSLT----VKEHT------HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                    + E T       I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 223 FSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV--PDIRWRKVLE 280

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 281 PMPSTAE---ISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 328



 Score = 40.8 bits (94), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+     +V+ + +  V W  V    L      Y+++ W   D E +   + V   
Sbjct: 808 PSEAPTEVGA-KVLSSSEISVHWEHV----LEKIVESYQIRYWAAHDKEEAANRVQVTSQ 862

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GPPS++I   T +  P     + +     S +
Sbjct: 863 E-YSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKAPPSQPPRIISSVRSGSRY 921

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYK+ Y+
Sbjct: 922 IITWDHVVALSNESTVTGYKVLYR 945


>gi|2190958|gb|AAB60937.1| neural cell adhesion molecule [Homo sapiens]
          Length = 1224

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 177/713 (24%), Positives = 297/713 (41%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 269 LKGEILLLECFAEGLPTPQVDWNKIGGDL-PKGREAKENYGKTLKIENVSYQDKGNYRCT 327

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG P
Sbjct: 328 ASNFLGTA-THDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 386

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +   P      V P  I+  NL+ + T  Y C A+N  G +  +  ++V+   P I    
Sbjct: 387 VDNHP-FAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQTKD 445

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            + Y TV G +  L C  F +P+  V+W  +   K L G RY I E G L+I      D+
Sbjct: 446 GENYATVVGYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDA 505

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L 
Sbjct: 506 GSYSCWVENAIGKTAVTANLDIRNATKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLK 565

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y C A T LD       +TV 
Sbjct: 566 LSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVL 625

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +  +   +   Y V+    K+  G   EL   +
Sbjct: 626 DVPDPPENLHLSERQN-RSVRLTWEAGADHN--SNISEYIVEFEGNKEEPGRWEELTRVQ 682

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 683 GKKTTV-ILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 741

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 742 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 792

Query: 576 T--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G + + +  Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 793 VYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKD 852

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ +++        
Sbjct: 853 RVHGRLKGYQINW--------WKTKSLLDGRT-----------HPKEVNILRF------- 886

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 887 ---------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTPEG 930



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 140/651 (21%), Positives = 250/651 (38%), Gaps = 77/651 (11%)

Query: 54  FCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113
           +C F   P  +TI  K  +P+              L +  ++ ++  S + E+ +     
Sbjct: 202 YCCFAAFPRLRTIVQK--MPMK-------------LTVNSLKHANDSSSSTEIGSKANSI 246

Query: 114 KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           K     L  L  P  +     I   + E +  EC A GLP P++ W   G  + +     
Sbjct: 247 KQRKPKL--LLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKG---- 300

Query: 174 RRKVGPN---RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
            R+   N    + IEN+   D GNY C A+N LG    D +V ++   P  T+ P+    
Sbjct: 301 -REAKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHV-IVEEPPRWTKKPQSAVY 358

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCF 288
             G   +L C   G P+P + W  N   +    +   ++   ++  T++    +  Y C 
Sbjct: 359 STGSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCE 418

Query: 289 ARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           A N  GT   + ++ V +   +  T   E+Y    G SA   C   + P   +S  W + 
Sbjct: 419 ASNVHGTILANANIDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS--WQKV 476

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPS 406
            E    E     +  N  +L + +++E D+G Y+C  +  +      A L ++       
Sbjct: 477 EEVKPLEGRRYHIYENG-TLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR------- 528

Query: 407 NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGES---T 463
                   +A K  VS  P +P+  + H      ++  +   + S++      GE+    
Sbjct: 529 --------NATKLRVS--PKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDGEAFEIN 578

Query: 464 TTEVDKFVPASKNFA---RVLAFNGAYNGPP------SEIISFVTPEGVPGTVQSLEAIP 514
            TE  + +    N       L   G Y          +  I+ VT   VP   ++L    
Sbjct: 579 GTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSE 638

Query: 515 LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLE 573
             + +  L W      N  +  Y ++++   G K  P   E L  +    TT   +  L 
Sbjct: 639 RQNRSVRLTWEAGADHNSNISEYIVEFE---GNKEEPGRWEELTRVQGKKTTV--ILPLA 693

Query: 574 PSTKYRIHLAGYTKAGDGAESKYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPE 627
           P  +Y+  +    + G    S+   +       P +NP N+  + S P  ++I W  +  
Sbjct: 694 PFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKS 753

Query: 628 IEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           +E N P  +YR+ W+       W ++ V +     L +     + PY++KV
Sbjct: 754 MEQNGPGLEYRVTWKPQGAPVEWEEETVTN---HTLRVMTPAVYAPYDVKV 801



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 128/539 (23%), Positives = 223/539 (41%), Gaps = 49/539 (9%)

Query: 88   SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
            +L I      D GSY+C V N +G+  + + +L +  A    V P+     +   +   C
Sbjct: 494  TLQINRTTEEDAGSYSCWVENAIGKT-AVTANLDIRNATKLRVSPKNPRIPKLHMLELHC 552

Query: 148  KA---SGLPEP-EIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202
            ++   S L    ++ W  +G+        + R  +    +TI N+   D G Y C+A  +
Sbjct: 553  ESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTA 612

Query: 203  LGYVYKDVYVNVLAHAPEITEAPKDEYTVD--GKTVVLTCRVFGAPKPE------VNWIH 254
            L        V VL    ++ + P++ +  +   ++V LT    GA          V +  
Sbjct: 613  LDSAADITQVTVL----DVPDPPENLHLSERQNRSVRLTWEA-GADHNSNISEYIVEFEG 667

Query: 255  NQKELTGGRYTILETGDLKITDVAFADSG----EYTCFARNKLGTAQGSGSLTVKEHTHI 310
            N++E   GR+  L     K T V    +     ++   A N++G +Q S      E    
Sbjct: 668  NKEE--PGRWEELTRVQGKKTTVILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPA 725

Query: 311  T--DQPEDYEVEAGQSAT-------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS 361
                 P++  V+A Q           +    + P L+  + W     P+++E E      
Sbjct: 726  APDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TV 781

Query: 362  NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKK 418
             +++L V   +         +A  +L       ++T+    + P    +I    VI++  
Sbjct: 782  TNHTLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTL 841

Query: 419  AVVSWNPVSPQSLRGHFRGYKVQTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPA 473
              V+W+ V    + G  +GY++  W  K   DG    +E+ + +  G+  +  V      
Sbjct: 842  VKVTWSTVPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAF 901

Query: 474  SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV 533
            S+    VLA+N    GP SE   F TPEGVP     L+ I +      L W  P++ NG 
Sbjct: 902  SEFHLTVLAYNSKGAGPESEPYIFQTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGN 961

Query: 534  LMGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            L GY ++YQ +  T ++G L +    I+ P+  S  L+ L  +TKY+ +L   T  G G
Sbjct: 962  LTGYLLQYQIINDTYEIGELNDI--NITTPSKPSWHLSNLNATTKYKFYLRACTSQGCG 1018



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 169/430 (39%), Gaps = 62/430 (14%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P   W+KDG P   +D   I   N G   I      S  QG Y C  SN
Sbjct: 54  QIECEAKGNPEPTFSWTKDGNPFYFTDHRIIPSNNSGTFRIPNEGHISHFQGKYRCFASN 113

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKP 165
            +G A S  I+  V + P F  E  + +   E + +   C    GLP   I+W++   + 
Sbjct: 114 KLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEH 173

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA- 218
           I Q       + G   +   N+ + D+ N Y C A        +  +   + VN L HA 
Sbjct: 174 IEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHAN 231

Query: 219 -------------------PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWI 253
                              P++   P +  +      + G+ ++L C   G P P+V+W 
Sbjct: 232 DSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWN 291

Query: 254 HNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD 312
               +L  GR      G  LKI +V++ D G Y C A N LGTA     + V+E    T 
Sbjct: 292 KIGGDLPKGREAKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTK 351

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID---------FESEPRF--VQS 361
           +P+      G +    C A  +P  + +I W     P+D         F  E  F  +Q 
Sbjct: 352 KPQSAVYSTGSNGILLCEAEGEP--QPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQP 409

Query: 362 NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDA 416
           N  ++   ++S +     T  A   +D ++ +  +  +       +   S F   +   +
Sbjct: 410 NHTAVYQCEASNVHG---TILANANIDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFAS 466

Query: 417 KKAVVSWNPV 426
            +AVVSW  V
Sbjct: 467 PEAVVSWQKV 476



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 75/190 (39%), Gaps = 10/190 (5%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKP--ISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +E    EC+A G PEP   W  +G P   +     P    G  RI  E       G Y C
Sbjct: 50  DEYFQIECEAKGNPEPTFSWTKDGNPFYFTDHRIIPSNNSGTFRIPNEGHISHFQGKYRC 109

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN 255
            A+N LG    +    ++   P+  +   D   V +G  +VL C    G P   + W++ 
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNI 169

Query: 256 QKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTH 309
           + E      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV    H
Sbjct: 170 ELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKH 229

Query: 310 ITDQPEDYEV 319
             D     E+
Sbjct: 230 ANDSSSSTEI 239


>gi|390340332|ref|XP_003725218.1| PREDICTED: neurofascin-like isoform 3 [Strongylocentrotus
           purpuratus]
          Length = 1269

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 183/701 (26%), Positives = 286/701 (40%), Gaps = 72/701 (10%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           E+A+R +  +L CI  G P P   W +    +    R+S    G+ L+I  VE SD+G+Y
Sbjct: 246 EIAIRTQLFKLKCIAYGYPTPVITWKRGEEQLQSGGRVSIEESGQELVISTVENSDKGTY 305

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
           TC  SN  G+ + +S  ++V +APYF   P        E+V  EC++ G+P P + W+ N
Sbjct: 306 TCVASNTGGDDE-FSTVVTVESAPYFPAPPSDETKGPGESVDIECRSEGVPAPAVDWLVN 364

Query: 163 GKPISQAPPNPRRK----VGPN----RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
           G+P +    N   +    V  N     I+I NL+ +D+  + C ATN        V +NV
Sbjct: 365 GQPWADFESNIDTERWTVVTGNPQLATISISNLQTTDSNVFQCIATNKYKEELTSVVLNV 424

Query: 215 L---AHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILE-T 269
           +   A  P  T   +    V+  +   TC V G P P + W      LT G +YTI E  
Sbjct: 425 VSIPARIPSFTPVTRKLSVVEDSSAAFTCHVEGRPTPTITWTFKGSVLTNGDKYTIDELA 484

Query: 270 GDLKITDVAFADSGEYTCFARNKLG----TAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
           G + I +    DSG Y C A N +      A GS +LTV   T IT  P D  V    +A
Sbjct: 485 GSIVINNALEVDSGAYECTAENSIDGQDYEATGSATLTVLGKTIITLPPADLTVREDTTA 544

Query: 326 TFRCNAVSDPSL-KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           TF+C    D  L K    W++  +        R   + D SL +  +   +SG YTC  +
Sbjct: 545 TFQCEITYDHELDKPETYWMKDGQ--------RLEANQDNSLRIDNAMFSNSGTYTCFVE 596

Query: 385 TELD-------FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRG 437
           T LD        + A A L V+     P N  L          + W P +  +    +  
Sbjct: 597 TTLDESTDTVHSVNASAQLVVKGHPGPPQNLQLRAKEQEFAMDLFWEPGNDNNAPIQYYI 656

Query: 438 YKVQT-WTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-II 495
            +  T W +   +    E   +   S   +V    P      RV+A N      PS  + 
Sbjct: 657 IQYDTKWADMHWQFQANE-TADDDTSRYRKVLHLQPFVDYQFRVIAVNEIGRSEPSAGVA 715

Query: 496 SFVTPEGVPGTVQSLEAIPLGS--SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGP 551
             V P+  P +   +E    G+   +  ++W  + P    G    Y++ Y+        P
Sbjct: 716 PTVDPQVAPPSKNPIEVSGSGTRPESMVIRWQSIHPFYYGGDDFHYEVAYR--------P 767

Query: 552 LLERLPYISD---PTTTSAKLAGL---------EPSTKYRIHLAGYTKAGDGAESKYLF- 598
            +   P++ D   P  T A   G+         +P  +Y   +      G G E +  + 
Sbjct: 768 RMSSEPFVKDTVYPENTDANPTGIIQNFIVNARKPYEEYEFSVRSMNSGGPGPEPEIHYG 827

Query: 599 ----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
                 P  +P  V     + N + ++W  +   + N     Y +++   N   A  QD 
Sbjct: 828 FSGEAAPGASPSGVTVEAISANEVNVTWEPIDPEDANGKLGGYNVYY---NVKIASGQDK 884

Query: 655 VLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELI 695
            +   +S  V+ N      YEI  V+ +T   GEG   +++
Sbjct: 885 QM-CVKSPCVVGNLQAATTYEI-TVKAFTNA-GEGPASDVV 922



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 140/323 (43%), Gaps = 25/323 (7%)

Query: 53  LFCIFGGTPLPQTIWSKDGV--PINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
           L C   G P P   W KDG    ++ +DR S    G +L+I+ +  +D G Y C  +N +
Sbjct: 55  LTCRATGIPEPSYYWYKDGALFDVDNNDRASLD--GGNLVIESLTTADDGQYQCFANNRL 112

Query: 111 GEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKAS-----GLPEPEIHWVHNGK 164
           G A S  I  S+     F    PE I   +   +   C  S     G P P I+W     
Sbjct: 113 GTAMSQKIMTSLAFMDQFENTAPETIQVDQGRPLKLRCGGSPGVPNGNPAPLIYWTDAAA 172

Query: 165 PISQAPPNPRRKVGP-NRITIENLRKSDTGNYGCNATNS-LGYVYKDVYVNVL------- 215
             +    N R    P   +   N+  SD   Y C A N+ +G   +   V ++       
Sbjct: 173 KPTPITYNARINQDPEGNLVFSNVIASDAKGYYCQAINNVVGSSQRTPKVTLMVSDLPPV 232

Query: 216 -AHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETG-DL 272
            + A  IT+   +E  +  +   L C  +G P P + W   +++L +GGR +I E+G +L
Sbjct: 233 ESGASLITKPAANEIAIRTQLFKLKCIAYGYPTPVITWKRGEEQLQSGGRVSIEESGQEL 292

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV 332
            I+ V  +D G YTC A N  G  + S  +TV+   +    P D     G+S    C + 
Sbjct: 293 VISTVENSDKGTYTCVASNTGGDDEFSTVVTVESAPYFPAPPSDETKGPGESVDIECRSE 352

Query: 333 SDPSLKLSIVWLRGSEP-IDFES 354
             P+   ++ WL   +P  DFES
Sbjct: 353 GVPA--PAVDWLVNGQPWADFES 373



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 114/278 (41%), Gaps = 24/278 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P    +PE IN      +T  C+A+G+PEP  +W  +G  +     N R  +    + IE
Sbjct: 36  PSIVEQPESINGDTRLPLTLTCRATGIPEPSYYWYKDGA-LFDVDNNDRASLDGGNLVIE 94

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVF- 243
           +L  +D G Y C A N LG       +  LA   +      +   VD G+ + L C    
Sbjct: 95  SLTTADDGQYQCFANNRLGTAMSQKIMTSLAFMDQFENTAPETIQVDQGRPLKLRCGGSP 154

Query: 244 ----GAPKPEVNWIHNQKELT----GGRYTILETGDLKITDVAFADSGEYTCFA-RNKLG 294
               G P P + W     + T      R      G+L  ++V  +D+  Y C A  N +G
Sbjct: 155 GVPNGNPAPLIYWTDAAAKPTPITYNARINQDPEGNLVFSNVIASDAKGYYCQAINNVVG 214

Query: 295 TAQGSGSLT--------VKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           ++Q +  +T        V+    +  +P   E+ A ++  F+   ++       I W RG
Sbjct: 215 SSQRTPKVTLMVSDLPPVESGASLITKPAANEI-AIRTQLFKLKCIAYGYPTPVITWKRG 273

Query: 347 SEPIDFESEPRF-VQSNDYSLTVTKSSELDSGQYTCRA 383
            E    +S  R  ++ +   L ++     D G YTC A
Sbjct: 274 EE--QLQSGGRVSIEESGQELVISTVENSDKGTYTCVA 309



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 110/265 (41%), Gaps = 19/265 (7%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
             P  +PS  T ++ I A +  V+W P+ P+   G   GY V  +  K   G  +++ V  
Sbjct: 833  APGASPSGVT-VEAISANEVNVTWEPIDPEDANGKLGGYNVY-YNVKIASGQDKQMCVK- 889

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
               +   V     A+     V AF  A  GP S+++  VT    PG V  L+ + + S  
Sbjct: 890  ---SPCVVGNLQAATTYEITVKAFTNAGEGPASDVVEVVTDSAPPGPVYKLK-VDVYSYR 945

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYR 579
              L W +P   NG L GY +    V    +G   E  P   D   T    A   P TKYR
Sbjct: 946  LVLNWQEPILTNGDLTGYNVIITPVVDETLGD-EENFPLAVDDDLTLIYEAS--PETKYR 1002

Query: 580  IHLAGYTKAGDGAE-----SKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPH 634
            + +      GDG +     + +L   P K P   +  G  P++   +W  +  +   A  
Sbjct: 1003 VEVLALNTIGDGEKTTEEPTTFLQGRPSK-PSGPDVDGIAPDHANFTWD-LSNLNPTASA 1060

Query: 635  FKYRIFWRRHNTGE--AWNQDDVLD 657
             + +   +  +TGE  +  Q DVLD
Sbjct: 1061 IEIQYRKKADDTGEFASSEQSDVLD 1085



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 23/196 (11%)

Query: 15  ILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI 74
           ++LNV++  I A      P    VTRK  V + +      C   G P P   W+  G  +
Sbjct: 420 VVLNVVS--IPARIPSFTP----VTRKLSV-VEDSSAAFTCHVEGRPTPTITWTFKGSVL 472

Query: 75  NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSY----SIDLSVLAAPYFTV 130
              D+ +      S++I +    D G+Y C   N + + + Y    S  L+VL     T+
Sbjct: 473 TNGDKYTIDELAGSIVINNALEVDSGAYECTAENSI-DGQDYEATGSATLTVLGKTIITL 531

Query: 131 EPEFINAAEEETVTFECKAS---GLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENL 187
            P  +   E+ T TF+C+ +    L +PE +W+ +G+ +     N  R        I+N 
Sbjct: 532 PPADLTVREDTTATFQCEITYDHELDKPETYWMKDGQRLEANQDNSLR--------IDNA 583

Query: 188 RKSDTGNYGCNATNSL 203
             S++G Y C    +L
Sbjct: 584 MFSNSGTYTCFVETTL 599


>gi|402859573|ref|XP_003894227.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 3
           [Papio anubis]
          Length = 1171

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 180/713 (25%), Positives = 293/713 (41%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 269 LKGETLLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYGKTLKIENVSYQDKGNYRCT 327

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG P
Sbjct: 328 ASNFLGTA-THDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 386

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           I   P      V P  I+  NL+ + T  Y C A+N  G +     V+V+   P I    
Sbjct: 387 IDNHP-FAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILASANVDVVDVRPLIQTKD 445

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            + Y TV G +  L C  F +P+  V+W  +   K L G RY + + G L+I      D+
Sbjct: 446 GENYATVVGYSAFLHCEFFASPEAVVSWQKVEEAKPLEGRRYHVYDNGTLQINRTTEEDA 505

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L 
Sbjct: 506 GSYSCWVENAIGKTAVTANLDIRNATQLRVSPKNPRIPKLHMLELHCESKCDLHLKHSLK 565

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y C A T LD       +TV 
Sbjct: 566 LSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVL 625

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   +SW   +      +   Y V+    K+  G   EL   +
Sbjct: 626 DVPDPPENLHLSERQN-RSVRLSWE--AGDDHNSNISEYIVEFEGNKEDPGRWEELTRVQ 682

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 683 GKKTTV-ILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 741

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 742 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 792

Query: 576 T--KYRIHLAGYTKAGDG-AESKYLFYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G A      Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 793 VYAPYDVKVQAINQLGSGPAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKD 852

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ V++        
Sbjct: 853 RVHGRLKGYQINW--------WKTKSLLDGRT-----------HPKEVNVLRF------- 886

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 887 ---------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTPEG 930



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 142/648 (21%), Positives = 257/648 (39%), Gaps = 71/648 (10%)

Query: 54  FCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113
           +C F   P  +TI  K  +P+              L +  ++ ++  S + E+ +     
Sbjct: 202 YCCFAAFPRLRTIVQK--MPMK-------------LTVNSLKHANDSSSSTEIGSKANSI 246

Query: 114 KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           K     L  L  P  +     I   + ET+  EC A GLP P++ W   G  + +     
Sbjct: 247 KQRKPKL--LLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKG---- 300

Query: 174 RRKVGPN---RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
            R+   N    + IEN+   D GNY C A+N LG    D +V ++   P  T+ P+    
Sbjct: 301 -RETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHV-IVEEPPRWTKKPQSAVY 358

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCF 288
             G   +L C   G P+P + W  N   +    +   ++   ++  T++    +  Y C 
Sbjct: 359 STGSNGILLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTAVYQCE 418

Query: 289 ARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           A N  GT   S ++ V +   +  T   E+Y    G SA   C   + P   +S  W + 
Sbjct: 419 ASNVHGTILASANVDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS--WQKV 476

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE--- 403
            E    E   R+   ++ +L + +++E D+G Y+C  +  +      A L ++   +   
Sbjct: 477 EEAKPLEGR-RYHVYDNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNATQLRV 535

Query: 404 APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG------SIRELIV 457
           +P N  +      K  ++  +  S   L  H +     +W+ KDGE           +I+
Sbjct: 536 SPKNPRI-----PKLHMLELHCESKCDL--HLKHSLKLSWS-KDGEAFEINGTEDGRIII 587

Query: 458 NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS 517
           +    T + V          + + A + A +      I+ VT   VP   ++L      +
Sbjct: 588 DGANLTISNVTLEDQGIYCCSALTALDSAAD------ITQVTVLDVPDPPENLHLSERQN 641

Query: 518 SAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPST 576
            +  L W   +  N  +  Y ++++   G K  P   E L  +    TT   +  L P  
Sbjct: 642 RSVRLSWEAGDDHNSNISEYIVEFE---GNKEDPGRWEELTRVQGKKTTV--ILPLAPFV 696

Query: 577 KYRIHLAGYTKAGDGAESKYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEH 630
           +Y+  +    + G    S+   +       P +NP N+  + S P  ++I W  +  +E 
Sbjct: 697 RYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQ 756

Query: 631 NAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           N P  +YR+ W+       W ++ V +     L +     + PY++KV
Sbjct: 757 NGPGLEYRVTWKPQGAPVEWEEETVTN---HTLRVMTPAVYAPYDVKV 801



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 132/577 (22%), Positives = 228/577 (39%), Gaps = 55/577 (9%)

Query: 53   LFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L C F  +P     W K  +  P+    R    + G +L I      D GSY+C V N +
Sbjct: 459  LHCEFFASPEAVVSWQKVEEAKPLE-GRRYHVYDNG-TLQINRTTEEDAGSYSCWVENAI 516

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--------WVHN 162
            G+  + + +L +  A    V P+     +   +   C++      ++H        W  +
Sbjct: 517  GKT-AVTANLDIRNATQLRVSPKNPRIPKLHMLELHCESKC----DLHLKHSLKLSWSKD 571

Query: 163  GKPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
            G+        + R  +    +TI N+   D G Y C+A  +L        V VL    ++
Sbjct: 572  GEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVL----DV 627

Query: 222  TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG-----GRYTILETGDLKITD 276
             + P++ +  + +   +            N      E  G     GR+  L     K T 
Sbjct: 628  PDPPENLHLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEDPGRWEELTRVQGKKTT 687

Query: 277  VAFADSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSAT---- 326
            V    +     ++   A N++G +Q S      E         P++  V+A Q       
Sbjct: 688  VILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIK 747

Query: 327  ---FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
                +    + P L+  + W     P+++E E       +++L V   +         +A
Sbjct: 748  WEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TVTNHTLRVMTPAVYAPYDVKVQA 803

Query: 384  QTELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
              +L    A  ++T+    + P    +I    VI++    V+W+ +    + G  +GY++
Sbjct: 804  INQLGSGPAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQI 863

Query: 441  QTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
              W  K   DG    +E+ V +  G+  +  V      S+    VLA+N    GP SE  
Sbjct: 864  NWWKTKSLLDGRTHPKEVNVLRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPY 923

Query: 496  SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE 554
             F TPEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T ++G L +
Sbjct: 924  IFQTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGNLTGYLLQYQIINDTYEIGELND 983

Query: 555  RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
                I+ P+  S  L+ L  +TKY+ +L   T  G G
Sbjct: 984  I--NITTPSKPSWHLSNLNATTKYKFYLRACTSRGCG 1018



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 192/477 (40%), Gaps = 69/477 (14%)

Query: 12  GNRILLNVIATGISASQNRHAPK--QQYVTRKKEVALR-----NKKVELFCIFGGTPLPQ 64
           G R+++++I   +  S     P   QQ  T  K+  ++     ++  ++ C   G P P 
Sbjct: 7   GRRLIISLIFFLLKFSTAIEIPPSVQQVPTIIKQSKVQVAFPFDEYFQIECEAKGNPEPT 66

Query: 65  TIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSNGVGEAKSYSIDLS 121
             W+KDG P   +D   I+  N G   I      S  QG Y C  SN +G A S  I+  
Sbjct: 67  FTWTKDGNPFYFTDHRIITSNNSGTFRIPNEGHISHFQGKYRCFASNKLGIAMSEEIEFI 126

Query: 122 VLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKPISQAPPNPRRKVG 178
           V + P F  E  + +   E + +   C    GLP   I+W++   + I Q       + G
Sbjct: 127 VPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEHIEQDERVYMSQKG 186

Query: 179 PNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA-------------- 218
              +   N+ + D+ N Y C A        +  +   + VN L HA              
Sbjct: 187 --DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHANDSSSSTEIGSKAN 244

Query: 219 ------PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
                 P++   P +  +      + G+T++L C   G P P+V+W     +L  GR T 
Sbjct: 245 SIKQRKPKLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETK 304

Query: 267 LETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
              G  LKI +V++ D G Y C A N LGTA     + V+E    T +P+      G + 
Sbjct: 305 ENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKKPQSAVYSTGSNG 364

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPID---------FESEPRF--VQSNDYSLTVTKSSEL 374
              C A  +P  + +I W     PID         F  E  F  +Q N  ++   ++S +
Sbjct: 365 ILLCEAEGEP--QPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNV 422

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDAKKAVVSWNPV 426
                T  A   +D ++ +  +  +       +   S F   +   + +AVVSW  V
Sbjct: 423 HG---TILASANVDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV 476


>gi|119584273|gb|EAW63869.1| cell adhesion molecule with homology to L1CAM (close homolog of
           L1), isoform CRA_b [Homo sapiens]
          Length = 1224

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 177/713 (24%), Positives = 297/713 (41%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 269 LKGEILLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYGKTLKIENVSYQDKGNYRCT 327

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG P
Sbjct: 328 ASNFLGTA-THDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 386

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +   P      V P  I+  NL+ + T  Y C A+N  G +  +  ++V+   P I    
Sbjct: 387 VDNHP-FAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQTKD 445

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            + Y TV G +  L C  F +P+  V+W  +   K L G RY I E G L+I      D+
Sbjct: 446 GENYATVVGYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDA 505

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L 
Sbjct: 506 GSYSCWVENAIGKTAVTANLDIRNATKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLK 565

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y C A T LD       +TV 
Sbjct: 566 LSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVL 625

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +  +   +   Y V+    K+  G   EL   +
Sbjct: 626 DVPDPPENLHLSERQN-RSVRLTWEAGADHN--SNISEYIVEFEGNKEEPGRWEELTRVQ 682

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 683 GKKTTV-ILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 741

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 742 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 792

Query: 576 T--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G + + +  Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 793 VYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKD 852

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ +++        
Sbjct: 853 RVHGRLKGYQINW--------WKTKSLLDGRT-----------HPKEVNILRF------- 886

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 887 ---------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTPEG 930



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 140/651 (21%), Positives = 250/651 (38%), Gaps = 77/651 (11%)

Query: 54  FCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113
           +C F   P  +TI  K  +P+              L +  ++ ++  S + E+ +     
Sbjct: 202 YCCFAAFPRLRTIVQK--MPMK-------------LTVNSLKHANDSSSSTEIGSKANSI 246

Query: 114 KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           K     L  L  P  +     I   + E +  EC A GLP P++ W   G  + +     
Sbjct: 247 KQRKPKL--LLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKG---- 300

Query: 174 RRKVGPN---RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
            R+   N    + IEN+   D GNY C A+N LG    D +V ++   P  T+ P+    
Sbjct: 301 -RETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHV-IVEEPPRWTKKPQSAVY 358

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCF 288
             G   +L C   G P+P + W  N   +    +   ++   ++  T++    +  Y C 
Sbjct: 359 STGSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCE 418

Query: 289 ARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           A N  GT   + ++ V +   +  T   E+Y    G SA   C   + P   +S  W + 
Sbjct: 419 ASNVHGTILANANIDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS--WQKV 476

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPS 406
            E    E     +  N  +L + +++E D+G Y+C  +  +      A L ++       
Sbjct: 477 EEVKPLEGRRYHIYENG-TLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR------- 528

Query: 407 NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGES---T 463
                   +A K  VS  P +P+  + H      ++  +   + S++      GE+    
Sbjct: 529 --------NATKLRVS--PKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDGEAFEIN 578

Query: 464 TTEVDKFVPASKNFA---RVLAFNGAYNGPP------SEIISFVTPEGVPGTVQSLEAIP 514
            TE  + +    N       L   G Y          +  I+ VT   VP   ++L    
Sbjct: 579 GTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSE 638

Query: 515 LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLE 573
             + +  L W      N  +  Y ++++   G K  P   E L  +    TT   +  L 
Sbjct: 639 RQNRSVRLTWEAGADHNSNISEYIVEFE---GNKEEPGRWEELTRVQGKKTTV--ILPLA 693

Query: 574 PSTKYRIHLAGYTKAGDGAESKYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPE 627
           P  +Y+  +    + G    S+   +       P +NP N+  + S P  ++I W  +  
Sbjct: 694 PFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKS 753

Query: 628 IEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           +E N P  +YR+ W+       W ++ V +     L +     + PY++KV
Sbjct: 754 MEQNGPGLEYRVTWKPQGAPVEWEEETVTN---HTLRVMTPAVYAPYDVKV 801



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 128/539 (23%), Positives = 223/539 (41%), Gaps = 49/539 (9%)

Query: 88   SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
            +L I      D GSY+C V N +G+  + + +L +  A    V P+     +   +   C
Sbjct: 494  TLQINRTTEEDAGSYSCWVENAIGKT-AVTANLDIRNATKLRVSPKNPRIPKLHMLELHC 552

Query: 148  KA---SGLPEP-EIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202
            ++   S L    ++ W  +G+        + R  +    +TI N+   D G Y C+A  +
Sbjct: 553  ESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTA 612

Query: 203  LGYVYKDVYVNVLAHAPEITEAPKDEYTVD--GKTVVLTCRVFGAPKPE------VNWIH 254
            L        V VL    ++ + P++ +  +   ++V LT    GA          V +  
Sbjct: 613  LDSAADITQVTVL----DVPDPPENLHLSERQNRSVRLTWEA-GADHNSNISEYIVEFEG 667

Query: 255  NQKELTGGRYTILETGDLKITDVAFADSG----EYTCFARNKLGTAQGSGSLTVKEHTHI 310
            N++E   GR+  L     K T V    +     ++   A N++G +Q S      E    
Sbjct: 668  NKEE--PGRWEELTRVQGKKTTVILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPA 725

Query: 311  T--DQPEDYEVEAGQSAT-------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS 361
                 P++  V+A Q           +    + P L+  + W     P+++E E      
Sbjct: 726  APDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TV 781

Query: 362  NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKK 418
             +++L V   +         +A  +L       ++T+    + P    +I    VI++  
Sbjct: 782  TNHTLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTL 841

Query: 419  AVVSWNPVSPQSLRGHFRGYKVQTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPA 473
              V+W+ V    + G  +GY++  W  K   DG    +E+ + +  G+  +  V      
Sbjct: 842  VKVTWSTVPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAF 901

Query: 474  SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV 533
            S+    VLA+N    GP SE   F TPEGVP     L+ I +      L W  P++ NG 
Sbjct: 902  SEFHLTVLAYNSKGAGPESEPYIFQTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGN 961

Query: 534  LMGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            L GY ++YQ +  T ++G L +    I+ P+  S  L+ L  +TKY+ +L   T  G G
Sbjct: 962  LTGYLLQYQIINDTYEIGELNDI--NITTPSKPSWHLSNLNATTKYKFYLRACTSQGCG 1018



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 170/430 (39%), Gaps = 62/430 (14%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P   W+KDG P   +D   I   N G   I      S  QG Y C  SN
Sbjct: 54  QIECEAKGNPEPTFSWTKDGNPFYFTDHRIIPSNNSGTFRIPNEGHISHFQGKYRCFASN 113

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKP 165
            +G A S  I+  V + P F  E  + +   E + +   C    GLP   I+W++   + 
Sbjct: 114 KLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEH 173

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA- 218
           I Q       + G   +   N+ + D+ N Y C A        +  +   + VN L HA 
Sbjct: 174 IEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHAN 231

Query: 219 -------------------PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWI 253
                              P++   P +  +      + G+ ++L C   G P P+V+W 
Sbjct: 232 DSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWN 291

Query: 254 HNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD 312
               +L  GR T    G  LKI +V++ D G Y C A N LGTA     + V+E    T 
Sbjct: 292 KIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTK 351

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID---------FESEPRF--VQS 361
           +P+      G +    C A  +P  + +I W     P+D         F  E  F  +Q 
Sbjct: 352 KPQSAVYSTGSNGILLCEAEGEP--QPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQP 409

Query: 362 NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDA 416
           N  ++   ++S +     T  A   +D ++ +  +  +       +   S F   +   +
Sbjct: 410 NHTAVYQCEASNVHG---TILANANIDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFAS 466

Query: 417 KKAVVSWNPV 426
            +AVVSW  V
Sbjct: 467 PEAVVSWQKV 476



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 75/190 (39%), Gaps = 10/190 (5%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKP--ISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +E    EC+A G PEP   W  +G P   +     P    G  RI  E       G Y C
Sbjct: 50  DEYFQIECEAKGNPEPTFSWTKDGNPFYFTDHRIIPSNNSGTFRIPNEGHISHFQGKYRC 109

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN 255
            A+N LG    +    ++   P+  +   D   V +G  +VL C    G P   + W++ 
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNI 169

Query: 256 QKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTH 309
           + E      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV    H
Sbjct: 170 ELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKH 229

Query: 310 ITDQPEDYEV 319
             D     E+
Sbjct: 230 ANDSSSSTEI 239


>gi|397522463|ref|XP_003831286.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 3
           [Pan paniscus]
          Length = 1171

 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 176/713 (24%), Positives = 297/713 (41%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 269 LKGEILLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYGKTLKIENVSYQDKGNYRCT 327

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG P
Sbjct: 328 ASNFLGTA-THDFHVIVEEPPRWTKQPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 386

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +   P      V P  I+  NL+ + T  Y C A+N  G +  +  ++V+   P I    
Sbjct: 387 VDNHP-FAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQTKD 445

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            + Y TV G +  L C  F +P+  V+W  +   K L G RY I E G L+I      D+
Sbjct: 446 GENYATVVGYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDA 505

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L 
Sbjct: 506 GSYSCWVENAIGKTAVTANLDIRNATKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLK 565

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y C A T LD       +TV 
Sbjct: 566 LSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVL 625

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +  +   +   Y V+    K+  G   EL   +
Sbjct: 626 DVPDPPENLHLSERQN-RSVRLTWEAGADHN--SNISEYIVEFEGNKEEPGRWEELTRVQ 682

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 683 GKKTTV-ILPLAPFVRYQFRVIAVNEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQP 741

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 742 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 792

Query: 576 T--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G + + +  Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 793 VYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKD 852

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y++ W        W    +LD R             P E+ +++        
Sbjct: 853 RVHGRLKGYQVNW--------WKTKSLLDGRT-----------HPKEVNILRF------- 886

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 887 ---------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTPEG 930



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 140/651 (21%), Positives = 249/651 (38%), Gaps = 77/651 (11%)

Query: 54  FCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113
           +C F   P  +TI  K  +P+              L +  ++ ++  S + E+ +     
Sbjct: 202 YCCFAAFPRLRTIVQK--MPMK-------------LTVNSLKHANDSSSSTEIGSKANSI 246

Query: 114 KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           K     L  L  P  +     I   + E +  EC A GLP P++ W   G  + +     
Sbjct: 247 KQRKPKL--LLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKG---- 300

Query: 174 RRKVGPN---RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
            R+   N    + IEN+   D GNY C A+N LG    D +V ++   P  T+ P+    
Sbjct: 301 -RETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHV-IVEEPPRWTKQPQSAVY 358

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCF 288
             G   +L C   G P+P + W  N   +    +   ++   ++  T++    +  Y C 
Sbjct: 359 STGSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCE 418

Query: 289 ARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           A N  GT   + ++ V +   +  T   E+Y    G SA   C   + P   +S  W + 
Sbjct: 419 ASNVHGTILANANIDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS--WQKV 476

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPS 406
            E    E     +  N  +L + +++E D+G Y+C  +  +      A L ++       
Sbjct: 477 EEVKPLEGRRYHIYENG-TLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR------- 528

Query: 407 NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGES---T 463
                   +A K  VS  P +P+  + H      ++  +   + S++      GE+    
Sbjct: 529 --------NATKLRVS--PKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDGEAFEIN 578

Query: 464 TTEVDKFVPASKNFA---RVLAFNGAYNGPP------SEIISFVTPEGVPGTVQSLEAIP 514
            TE  + +    N       L   G Y          +  I+ VT   VP   ++L    
Sbjct: 579 GTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSE 638

Query: 515 LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLE 573
             + +  L W      N  +  Y ++++   G K  P   E L  +    TT   +  L 
Sbjct: 639 RQNRSVRLTWEAGADHNSNISEYIVEFE---GNKEEPGRWEELTRVQGKKTTV--ILPLA 693

Query: 574 PSTKYRIHLAGYTKAGDGAESKYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPE 627
           P  +Y+  +    + G    S+           P +NP N+  + S P  ++I W  +  
Sbjct: 694 PFVRYQFRVIAVNEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKS 753

Query: 628 IEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           +E N P  +YR+ W+       W ++ V +     L +     + PY++KV
Sbjct: 754 MEQNGPGLEYRVTWKPQGAPVEWEEETVTN---HTLRVMTPAVYAPYDVKV 801



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 128/539 (23%), Positives = 223/539 (41%), Gaps = 49/539 (9%)

Query: 88   SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
            +L I      D GSY+C V N +G+  + + +L +  A    V P+     +   +   C
Sbjct: 494  TLQINRTTEEDAGSYSCWVENAIGKT-AVTANLDIRNATKLRVSPKNPRIPKLHMLELHC 552

Query: 148  KA---SGLPEP-EIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202
            ++   S L    ++ W  +G+        + R  +    +TI N+   D G Y C+A  +
Sbjct: 553  ESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTA 612

Query: 203  LGYVYKDVYVNVLAHAPEITEAPKDEYTVD--GKTVVLTCRVFGAPKPE------VNWIH 254
            L        V VL    ++ + P++ +  +   ++V LT    GA          V +  
Sbjct: 613  LDSAADITQVTVL----DVPDPPENLHLSERQNRSVRLTWEA-GADHNSNISEYIVEFEG 667

Query: 255  NQKELTGGRYTILETGDLKITDVAFADSG----EYTCFARNKLGTAQGSGSLTVKEHTHI 310
            N++E   GR+  L     K T V    +     ++   A N++G +Q S      E    
Sbjct: 668  NKEE--PGRWEELTRVQGKKTTVILPLAPFVRYQFRVIAVNEVGRSQPSQPSDRHETPPA 725

Query: 311  T--DQPEDYEVEAGQSAT-------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS 361
                 P++  V+A Q           +    + P L+  + W     P+++E E      
Sbjct: 726  APDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TV 781

Query: 362  NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKK 418
             +++L V   +         +A  +L       ++T+    + P    +I    VI++  
Sbjct: 782  TNHTLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTL 841

Query: 419  AVVSWNPVSPQSLRGHFRGYKVQTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPA 473
              V+W+ +    + G  +GY+V  W  K   DG    +E+ + +  G+  +  V      
Sbjct: 842  VKVTWSTIPKDRVHGRLKGYQVNWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAF 901

Query: 474  SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV 533
            S+    VLA+N    GP SE   F TPEGVP     L+ I +      L W  P++ NG 
Sbjct: 902  SEFHLTVLAYNSKGAGPESEPYIFQTPEGVPEQPTFLKVIKVDKDTATLSWGVPKKLNGN 961

Query: 534  LMGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            L GY ++YQ +  T ++G L +    I+ P+  S  L+ L  +TKY+ +L   T  G G
Sbjct: 962  LTGYLLQYQIINDTYEIGELNDI--NITTPSKPSWHLSNLNATTKYKFYLRACTSQGCG 1018



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 171/430 (39%), Gaps = 62/430 (14%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P   W+KDG P   +D   ++  N G   I      S  QG Y C  SN
Sbjct: 54  QIECEAKGNPEPTFSWTKDGNPFYFTDHRIMTSNNSGTFRIPNEGHISHFQGKYRCFASN 113

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKP 165
            +G A S  I+  V + P F  E  + +   E + +   C    GLP   I+W++   + 
Sbjct: 114 KLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEH 173

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA- 218
           I Q       + G   +   N+ + D+ N Y C A        +  +   + VN L HA 
Sbjct: 174 IEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHAN 231

Query: 219 -------------------PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWI 253
                              P++   P +  +      + G+ ++L C   G P P+V+W 
Sbjct: 232 DSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWN 291

Query: 254 HNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD 312
               +L  GR T    G  LKI +V++ D G Y C A N LGTA     + V+E    T 
Sbjct: 292 KIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTK 351

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID---------FESEPRF--VQS 361
           QP+      G +    C A  +P  + +I W     P+D         F  E  F  +Q 
Sbjct: 352 QPQSAVYSTGSNGILLCEAEGEP--QPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQP 409

Query: 362 NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDA 416
           N  ++   ++S +     T  A   +D ++ +  +  +       +   S F   +   +
Sbjct: 410 NHTAVYQCEASNVHG---TILANANIDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFAS 466

Query: 417 KKAVVSWNPV 426
            +AVVSW  V
Sbjct: 467 PEAVVSWQKV 476



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 21/244 (8%)

Query: 86  GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTF 145
           G+ LI+  + F  + S   E+ + V +A +      V  A  F           +E    
Sbjct: 7   GRGLIVSLIFFLLKFSKAIEIPSSVQQAPTIIKQSKVQVAFPF-----------DEYFQI 55

Query: 146 ECKASGLPEPEIHWVHNGKP--ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSL 203
           EC+A G PEP   W  +G P   +          G  RI  E       G Y C A+N L
Sbjct: 56  ECEAKGNPEPTFSWTKDGNPFYFTDHRIMTSNNSGTFRIPNEGHISHFQGKYRCFASNKL 115

Query: 204 GYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHNQKELT- 260
           G    +    ++   P+  +   D   V +G  +VL C    G P   + W++ + E   
Sbjct: 116 GIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEHIE 175

Query: 261 -GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTHITDQPE 315
              R  + + GDL   +V   DS  +Y CFA   R +    +    LTV    H  D   
Sbjct: 176 QDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHANDSSS 235

Query: 316 DYEV 319
             E+
Sbjct: 236 STEI 239


>gi|441665521|ref|XP_003264957.2| PREDICTED: neural cell adhesion molecule L1-like protein [Nomascus
           leucogenys]
          Length = 1171

 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 178/713 (24%), Positives = 296/713 (41%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 269 LKGETLLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYGKTLKIENVSYQDKGNYRCT 327

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG P
Sbjct: 328 ASNFLGTA-THDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 386

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           I   P      V P  I+  NL+ + T  Y C A+N  G +  +  ++V+   P I    
Sbjct: 387 IDNHP-FAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQTKD 445

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            + Y TV G    L C  F +P+  V+W  +   K L G +Y I E G L+I      D+
Sbjct: 446 GENYATVVGYNAFLHCEFFASPEAVVSWQKVEEVKPLEGRQYHIYENGTLQINRTTEDDA 505

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L 
Sbjct: 506 GSYSCWVENAIGKTAVTANLDIRNATKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLK 565

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y C A T LD       +TV 
Sbjct: 566 LSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVL 625

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +  +   +   Y V+    K+  G   EL   +
Sbjct: 626 DVPDPPENLHLSERQN-RSVRLTWEAGADHN--SNISEYIVEFEGNKEEPGRWEELTRVQ 682

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 683 GKKTTV-ILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 741

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 742 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 792

Query: 576 T--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G E + +  Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 793 VYAPYDVKVQAINQLGSGPEPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKD 852

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ +++        
Sbjct: 853 RVHGRLKGYQINW--------WKTKSLLDGRT-----------HPKEVNILRF------- 886

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 887 ---------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYVFQTPEG 930



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 138/648 (21%), Positives = 250/648 (38%), Gaps = 71/648 (10%)

Query: 54  FCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113
           +C F   P  +TI  K  +P+              L +  ++ ++  S + E+ +     
Sbjct: 202 YCCFAAFPRLRTIVQK--MPMK-------------LTVNSLKHANDSSSSTEIGSKANSI 246

Query: 114 KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           K     L  L  P  +     I   + ET+  EC A GLP P++ W   G  + +     
Sbjct: 247 KQRKPKL--LLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKG---- 300

Query: 174 RRKVGPN---RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
            R+   N    + IEN+   D GNY C A+N LG    D +V ++   P  T+ P+    
Sbjct: 301 -RETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHV-IVEEPPRWTKKPQSAVY 358

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCF 288
             G   +L C   G P+P + W  N   +    +   ++   ++  T++    +  Y C 
Sbjct: 359 STGSNGILLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTAVYQCE 418

Query: 289 ARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           A N  GT   + ++ V +   +  T   E+Y    G +A   C   + P   +S  W + 
Sbjct: 419 ASNVHGTILANANIDVVDVRPLIQTKDGENYATVVGYNAFLHCEFFASPEAVVS--WQKV 476

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPS 406
            E    E     +  N  +L + +++E D+G Y+C  +  +      A L ++       
Sbjct: 477 EEVKPLEGRQYHIYENG-TLQINRTTEDDAGSYSCWVENAIGKTAVTANLDIR------- 528

Query: 407 NFTLIQVIDAKKAVVSWNPV---SPQSLRGHFRGYKVQTWTEKDGEG------SIRELIV 457
           N T ++V      +   + +          H +     +W+ KDGE           +I+
Sbjct: 529 NATKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWS-KDGEAFEINGTEDGRIII 587

Query: 458 NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS 517
           +    T + V          +   A + A +      I+ VT   VP   ++L      +
Sbjct: 588 DGANLTISNVTLEDQGIYCCSAHTALDSAAD------ITQVTVLDVPDPPENLHLSERQN 641

Query: 518 SAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPST 576
            +  L W      N  +  Y ++++   G K  P   E L  +    TT   +  L P  
Sbjct: 642 RSVRLTWEAGADHNSNISEYIVEFE---GNKEEPGRWEELTRVQGKKTTV--ILPLAPFV 696

Query: 577 KYRIHLAGYTKAGDGAESKYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEH 630
           +Y+  +    + G    S+   +       P +NP N+  + S P  ++I W  +  +E 
Sbjct: 697 RYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQ 756

Query: 631 NAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           N P  +YR+ W+       W ++ V +     L +     + PY++KV
Sbjct: 757 NGPGLEYRVTWKPQGAPVEWEEETVTN---HTLRVMTPAVYAPYDVKV 801



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 127/539 (23%), Positives = 222/539 (41%), Gaps = 49/539 (9%)

Query: 88   SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
            +L I      D GSY+C V N +G+  + + +L +  A    V P+     +   +   C
Sbjct: 494  TLQINRTTEDDAGSYSCWVENAIGKT-AVTANLDIRNATKLRVSPKNPRIPKLHMLELHC 552

Query: 148  KA---SGLPEP-EIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202
            ++   S L    ++ W  +G+        + R  +    +TI N+   D G Y C+A  +
Sbjct: 553  ESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTA 612

Query: 203  LGYVYKDVYVNVLAHAPEITEAPKDEYTVD--GKTVVLTCRVFGAPKPE------VNWIH 254
            L        V VL    ++ + P++ +  +   ++V LT    GA          V +  
Sbjct: 613  LDSAADITQVTVL----DVPDPPENLHLSERQNRSVRLTWEA-GADHNSNISEYIVEFEG 667

Query: 255  NQKELTGGRYTILETGDLKITDVAFADSG----EYTCFARNKLGTAQGSGSLTVKEHTHI 310
            N++E   GR+  L     K T V    +     ++   A N++G +Q S      E    
Sbjct: 668  NKEE--PGRWEELTRVQGKKTTVILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPA 725

Query: 311  T--DQPEDYEVEAGQSAT-------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS 361
                 P++  V+A Q           +    + P L+  + W     P+++E E      
Sbjct: 726  APDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TV 781

Query: 362  NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKK 418
             +++L V   +         +A  +L       ++T+    + P    +I    VI++  
Sbjct: 782  TNHTLRVMTPAVYAPYDVKVQAINQLGSGPEPQSVTLYSGEDYPDTAPVIHGVDVINSTL 841

Query: 419  AVVSWNPVSPQSLRGHFRGYKVQTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPA 473
              V+W+ +    + G  +GY++  W  K   DG    +E+ + +  G+  +  V      
Sbjct: 842  VKVTWSTIPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAF 901

Query: 474  SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV 533
            S+    VLA+N    GP SE   F TPEGVP     L+ I +      L W  P++ NG 
Sbjct: 902  SEFHLTVLAYNSKGAGPESEPYVFQTPEGVPERPTFLKVIKVDKDTATLSWGLPKKLNGN 961

Query: 534  LMGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            L GY ++YQ +  T ++G L      I+ P+  S  L+ L  +TKY+ +L   T  G G
Sbjct: 962  LTGYLLQYQIINDTYEIGELNNI--NITTPSKPSWHLSNLSATTKYKFYLRACTSQGCG 1018



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 172/430 (40%), Gaps = 62/430 (14%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P   W+KDG P   +D   I+  + G   I      S  QG Y C  SN
Sbjct: 54  QIECEAKGNPEPTFTWTKDGNPFYFTDHRIITSNDSGTFRIPNEGHISHFQGKYRCFASN 113

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKP 165
            +G A S  I+  V + P F  E  + +   E + +   C    GLP   I+W++   + 
Sbjct: 114 KLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEH 173

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA- 218
           I Q       + G   +   N+ + D+ N Y C A        +  +   + VN L HA 
Sbjct: 174 IEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHAN 231

Query: 219 -------------------PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWI 253
                              P++   P +  +      + G+T++L C   G P P+V+W 
Sbjct: 232 DSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWN 291

Query: 254 HNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD 312
               +L  GR T    G  LKI +V++ D G Y C A N LGTA     + V+E    T 
Sbjct: 292 KIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTK 351

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID---------FESEPRF--VQS 361
           +P+      G +    C A  +P  + +I W     PID         F  E  F  +Q 
Sbjct: 352 KPQSAVYSTGSNGILLCEAEGEP--QPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQP 409

Query: 362 NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDA 416
           N  ++   ++S +     T  A   +D ++ +  +  +       +   + F   +   +
Sbjct: 410 NHTAVYQCEASNVHG---TILANANIDVVDVRPLIQTKDGENYATVVGYNAFLHCEFFAS 466

Query: 417 KKAVVSWNPV 426
            +AVVSW  V
Sbjct: 467 PEAVVSWQKV 476



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 83/363 (22%), Positives = 127/363 (34%), Gaps = 58/363 (15%)

Query: 86  GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTF 145
           G+ LII  + F  + S   E+   V +  +      V  A  F           +E    
Sbjct: 7   GRGLIISLIFFLLKFSTAIEIPPSVQQVPTIIKQSKVQVAFPF-----------DEYFQI 55

Query: 146 ECKASGLPEPEIHWVHNGKP--ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSL 203
           EC+A G PEP   W  +G P   +          G  RI  E       G Y C A+N L
Sbjct: 56  ECEAKGNPEPTFTWTKDGNPFYFTDHRIITSNDSGTFRIPNEGHISHFQGKYRCFASNKL 115

Query: 204 GYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHNQKELT- 260
           G    +    ++   P+  +   D   V +G  +VL C    G P   + W++ + E   
Sbjct: 116 GIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEHIE 175

Query: 261 -GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTHITDQPE 315
              R  + + GDL   +V   DS  +Y CFA   R +    +    LTV    H  D   
Sbjct: 176 QDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHANDSSS 235

Query: 316 DYEVEA-----------------------------GQSATFRCNAVSDPSLKLSIVWLRG 346
             E+ +                             G++    C A   P+ ++    + G
Sbjct: 236 STEIGSKANSIKQRKPKLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGG 295

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPS 406
             P   E++  + +    +L +   S  D G Y C A   L      AT    V +E P 
Sbjct: 296 DLPKGRETKENYGK----TLKIENVSYQDKGNYRCTASNFL----GTATHDFHVIVEEPP 347

Query: 407 NFT 409
            +T
Sbjct: 348 RWT 350


>gi|149036849|gb|EDL91467.1| contactin 4, isoform CRA_b [Rattus norvegicus]
          Length = 639

 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 185/394 (46%), Gaps = 24/394 (6%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+P  +W + DG PI    R  + +    L I + +  D GSY 
Sbjct: 171 AEKGSTVKLECFALGNPVPTILWRRADGKPIARKARRHKSS--GILEIPNFQQEDAGSYE 228

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    ++  A P +      I+ A EE+V +ECKA+G P+P   W+ NG
Sbjct: 229 CVAENSRGKNIAKG-QVTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNG 287

Query: 164 KPISQAPPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
            P+       R ++    G   ITI NL  SD G Y C A N  G +Y    ++V+A +P
Sbjct: 288 DPLLT-----RERIQIEQGTLNITIVNL--SDAGMYQCVAENKHGVIYASAELSVIAESP 340

Query: 220 EITEAPKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITD 276
           + +       T+   G  VV+ C+   +P+P   W   ++ L    R TI E G+L+I +
Sbjct: 341 DFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIIN 400

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
           V  +D+G YTC A N  GTA  +G++ VK+ T +   P   +V  G+S    C    D S
Sbjct: 401 VTKSDAGSYTCIATNHFGTASSTGNVVVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHS 460

Query: 337 LKLSIVWLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           L +   W      IDF+ +         Q +   L +       +G+Y C  QT +D + 
Sbjct: 461 LDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLS 520

Query: 392 AQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           A A L V+ P   P   T+ ++ D   A +SW P
Sbjct: 521 AAADLIVRGPPGPPEAVTIDEITDT-TAQLSWRP 553



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 164/433 (37%), Gaps = 67/433 (15%)

Query: 119 DLSVLAAPYFTVEPEFIN---AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D   L  P F  EP  +     +EE+ V   C+  G P+P I W  NG  +     + R 
Sbjct: 19  DDYTLHGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIG-MDFRY 77

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLG----------YVYKDVY------------- 211
            V    + I N  K+ D+G Y C ATNS G          + Y + +             
Sbjct: 78  SVVEGSLLINNPNKTQDSGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRG 137

Query: 212 --VNVLAHAPEITEAPKDEY----------TV---DGKTVVLTCRVFGAPKPEVNWIH-N 255
             + +L   P  +     EY          TV    G TV L C   G P P + W   +
Sbjct: 138 QGMVLLCGPPPHSGGVMGEYEPKIEVQFPETVPAEKGSTVKLECFALGNPVPTILWRRAD 197

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE 315
            K +         +G L+I +    D+G Y C A N  G     G +T     +      
Sbjct: 198 GKPIARKARRHKSSGILEIPNFQQEDAGSYECVAENSRGKNIAKGQVTFYAQPNWVQIIN 257

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
           D  V   +S  + C A   P  K +  WL+  +P+        +Q    +L +T  +  D
Sbjct: 258 DIHVAMEESVFWECKANGRP--KPTYRWLKNGDPLLTRER---IQIEQGTLNITIVNLSD 312

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPS-------NFTLIQVIDAKKAVVSWNP-VS 427
           +G Y C A+ +   I A A L+V    E+P          TL++V    + V+   P  S
Sbjct: 313 AGMYQCVAENKHGVIYASAELSVIA--ESPDFSRTLLKRVTLVKV--GGEVVIECKPKAS 368

Query: 428 PQSLRGHFRGYKVQTWTEK---DGEGSIRELIVNK---GESTTTEVDKFVPASKNFARVL 481
           P+ +    +G ++    E+     +G++R + V K   G  T    + F  AS     V+
Sbjct: 369 PRPVYTWRKGREILRENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNVVV 428

Query: 482 AFNGAYNGPPSEI 494
                   PPS +
Sbjct: 429 KDPTKVMVPPSSM 441


>gi|350584500|ref|XP_003355665.2| PREDICTED: contactin-1-like isoform 2 [Sus scrofa]
          Length = 1018

 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 188/729 (25%), Positives = 297/729 (40%), Gaps = 92/729 (12%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 241 PADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 298

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G+Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 299 NIQLEDEGTYECEAENIRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 354

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG          R ++    +T EN      G Y C A N+ G +Y +
Sbjct: 355 TGKPIPTIRWLKNGYSYH------RGELRLYDVTFEN-----AGMYQCIAENTHGAIYAN 403

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+  W    + L    R  I
Sbjct: 404 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFLWSKGTERLVNSSRILI 463

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCF  N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 464 WEDGSLEINNITRNDGGTYTCFVENNKGKANSTGTLVITDPTRIILAPINADITVGENAT 523

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ VW      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 524 MQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 583

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            AQT +D   A A L V+ P   P     I+ I A    ++W+  S          Y +Q
Sbjct: 584 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYNIQ 640

Query: 442 TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           T T    D + +  +  + +G          +P  +   RV+A N    G PS   + + 
Sbjct: 641 TKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIK 700

Query: 500 PEGVPGTVQSLEAIPLGSS--AFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
            +G    V   +    G S     + W  +  E   G   GY + ++   G +   +   
Sbjct: 701 TDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT-- 758

Query: 556 LPYISDPTTTS--AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS 613
              +++P T     K   + PST +++ +  +   GDG         P+           
Sbjct: 759 ---VTNPDTGRYVHKDETMRPSTAFQVKVKAFNNKGDG---------PY----------- 795

Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVL----ANQP 669
                  S TA+     +AP              EA  +  V     SE+ +      + 
Sbjct: 796 -------SLTAVIHSAQDAP-------------SEAPTEVGVKVLSSSEISVHWEHVVEK 835

Query: 670 TFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGP 729
             + Y+I+    W   D E +   + V   E  +  ++  +P ++ F  V A N A  GP
Sbjct: 836 IVESYQIRY---WAAHDKEAAAHRVQVTSQE-YSARLENLLPDTQYFVEVRACNSAGCGP 891

Query: 730 PSEIISFVT 738
           PS++I   T
Sbjct: 892 PSDMIETFT 900



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 153/657 (23%), Positives = 247/657 (37%), Gaps = 85/657 (12%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 189 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTKPYPADIVV 246

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  I A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 247 QFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 303

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N  G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 304 DEGTYECEAENIRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 362

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 363 RWLKN-----GYSY---HRGELRLYDVTFENAGMYQCIAENTHGAIYANAELKILALAPT 414

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K   +W +G+E +   S  R +   D SL 
Sbjct: 415 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKF--LWSKGTERLVNSS--RILIWEDGSLE 470

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC  +       +  TL +  P   + AP N  +    +A  +   S+
Sbjct: 471 INNITRNDGGTYTCFVENNKGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASF 530

Query: 424 NPVSPQSLRGHFRGYKVQ-----------TWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
           +P    +    F GY +               + +GE  IR   +      T      V 
Sbjct: 531 DPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVD 590

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
            S   A ++                    G PG    L    + +++  L W +    + 
Sbjct: 591 NSSASADLVV------------------RGPPGPPGGLRIEDIRATSVALTWSRGSDNHS 632

Query: 533 VLMGYKIKYQSV-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
            +  Y I+ +++     K  K  P     P I +    +A+   L P  +Y   +     
Sbjct: 633 PISKYNIQTKTILSDDWKDAKTDP-----PII-EGNMEAARAVDLIPWMEYEFRVVATNT 686

Query: 588 AGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            G G  S      K     P   P +V G G +   L I+W  +    H   +F Y + +
Sbjct: 687 LGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNNFGYIVAF 746

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
           +  + GE W +  V +      V  ++ T +P   +++KV     + DG  S+  +I
Sbjct: 747 KPFD-GEEWKKVTVTNPDTGRYVHKDE-TMRPSTAFQVKVKAFNNKGDGPYSLTAVI 801



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 139/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   I+  SDR S    G +L+I + +   D G Y C  S
Sbjct: 60  KVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 117

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 118 NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 171

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 172 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 228

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 229 LIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 288

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 289 STSGAVLKIFNIQLEDEGTYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 348

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+         E R      Y +T       ++G Y C A+ 
Sbjct: 349 YWPCVATGKPI--PTIRWLKNGYSY-HRGELRL-----YDVTFE-----NAGMYQCIAEN 395

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 396 THGAIYANAELKI 408



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   I     +    VG N +   
Sbjct: 47  PINTIYPE---ESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTS-DRYSMVGGNLVINN 102

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   +
Sbjct: 103 PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 162

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 163 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 222

Query: 299 SGSL---------TVKEH-THITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                        T K +   I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 223 FSKFIPLIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPV--PDIRWRKVLE 280

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 281 PMPSTAE---ISTSGAVLKIFNIQLEDEGTYECEAENIRGKDKHQARIYVQ 328



 Score = 43.9 bits (102), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+    ++V+ + +  V W  V  + +      Y+++ W   D E +   + V   
Sbjct: 808 PSEAPTEVG-VKVLSSSEISVHWEHVVEKIVES----YQIRYWAAHDKEAAAHRVQVTSQ 862

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GPPS++I   T +  P     + +     S +
Sbjct: 863 E-YSARLENLLPDTQYFVEVRACNSAGCGPPSDMIETFTKKAPPSQPPRIISSVRSGSRY 921

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYK+ Y+
Sbjct: 922 IITWDHVVALSNESTVTGYKVLYR 945


>gi|390340326|ref|XP_784933.3| PREDICTED: neurofascin-like isoform 4 [Strongylocentrotus
           purpuratus]
 gi|390340328|ref|XP_003725216.1| PREDICTED: neurofascin-like isoform 1 [Strongylocentrotus
           purpuratus]
 gi|390340330|ref|XP_003725217.1| PREDICTED: neurofascin-like isoform 2 [Strongylocentrotus
           purpuratus]
          Length = 1257

 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 183/701 (26%), Positives = 286/701 (40%), Gaps = 72/701 (10%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           E+A+R +  +L CI  G P P   W +    +    R+S    G+ L+I  VE SD+G+Y
Sbjct: 234 EIAIRTQLFKLKCIAYGYPTPVITWKRGEEQLQSGGRVSIEESGQELVISTVENSDKGTY 293

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
           TC  SN  G+ + +S  ++V +APYF   P        E+V  EC++ G+P P + W+ N
Sbjct: 294 TCVASNTGGDDE-FSTVVTVESAPYFPAPPSDETKGPGESVDIECRSEGVPAPAVDWLVN 352

Query: 163 GKPISQAPPNPRRK----VGPN----RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
           G+P +    N   +    V  N     I+I NL+ +D+  + C ATN        V +NV
Sbjct: 353 GQPWADFESNIDTERWTVVTGNPQLATISISNLQTTDSNVFQCIATNKYKEELTSVVLNV 412

Query: 215 L---AHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILE-T 269
           +   A  P  T   +    V+  +   TC V G P P + W      LT G +YTI E  
Sbjct: 413 VSIPARIPSFTPVTRKLSVVEDSSAAFTCHVEGRPTPTITWTFKGSVLTNGDKYTIDELA 472

Query: 270 GDLKITDVAFADSGEYTCFARNKLG----TAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
           G + I +    DSG Y C A N +      A GS +LTV   T IT  P D  V    +A
Sbjct: 473 GSIVINNALEVDSGAYECTAENSIDGQDYEATGSATLTVLGKTIITLPPADLTVREDTTA 532

Query: 326 TFRCNAVSDPSL-KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           TF+C    D  L K    W++  +        R   + D SL +  +   +SG YTC  +
Sbjct: 533 TFQCEITYDHELDKPETYWMKDGQ--------RLEANQDNSLRIDNAMFSNSGTYTCFVE 584

Query: 385 TELD-------FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRG 437
           T LD        + A A L V+     P N  L          + W P +  +    +  
Sbjct: 585 TTLDESTDTVHSVNASAQLVVKGHPGPPQNLQLRAKEQEFAMDLFWEPGNDNNAPIQYYI 644

Query: 438 YKVQT-WTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-II 495
            +  T W +   +    E   +   S   +V    P      RV+A N      PS  + 
Sbjct: 645 IQYDTKWADMHWQFQANE-TADDDTSRYRKVLHLQPFVDYQFRVIAVNEIGRSEPSAGVA 703

Query: 496 SFVTPEGVPGTVQSLEAIPLGS--SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGP 551
             V P+  P +   +E    G+   +  ++W  + P    G    Y++ Y+        P
Sbjct: 704 PTVDPQVAPPSKNPIEVSGSGTRPESMVIRWQSIHPFYYGGDDFHYEVAYR--------P 755

Query: 552 LLERLPYISD---PTTTSAKLAGL---------EPSTKYRIHLAGYTKAGDGAESKYLF- 598
            +   P++ D   P  T A   G+         +P  +Y   +      G G E +  + 
Sbjct: 756 RMSSEPFVKDTVYPENTDANPTGIIQNFIVNARKPYEEYEFSVRSMNSGGPGPEPEIHYG 815

Query: 599 ----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
                 P  +P  V     + N + ++W  +   + N     Y +++   N   A  QD 
Sbjct: 816 FSGEAAPGASPSGVTVEAISANEVNVTWEPIDPEDANGKLGGYNVYY---NVKIASGQDK 872

Query: 655 VLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELI 695
            +   +S  V+ N      YEI  V+ +T   GEG   +++
Sbjct: 873 QM-CVKSPCVVGNLQAATTYEI-TVKAFTNA-GEGPASDVV 910



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 140/323 (43%), Gaps = 25/323 (7%)

Query: 53  LFCIFGGTPLPQTIWSKDGV--PINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
           L C   G P P   W KDG    ++ +DR S    G +L+I+ +  +D G Y C  +N +
Sbjct: 43  LTCRATGIPEPSYYWYKDGALFDVDNNDRASLD--GGNLVIESLTTADDGQYQCFANNRL 100

Query: 111 GEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKAS-----GLPEPEIHWVHNGK 164
           G A S  I  S+     F    PE I   +   +   C  S     G P P I+W     
Sbjct: 101 GTAMSQKIMTSLAFMDQFENTAPETIQVDQGRPLKLRCGGSPGVPNGNPAPLIYWTDAAA 160

Query: 165 PISQAPPNPRRKVGP-NRITIENLRKSDTGNYGCNATNS-LGYVYKDVYVNVL------- 215
             +    N R    P   +   N+  SD   Y C A N+ +G   +   V ++       
Sbjct: 161 KPTPITYNARINQDPEGNLVFSNVIASDAKGYYCQAINNVVGSSQRTPKVTLMVSDLPPV 220

Query: 216 -AHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETG-DL 272
            + A  IT+   +E  +  +   L C  +G P P + W   +++L +GGR +I E+G +L
Sbjct: 221 ESGASLITKPAANEIAIRTQLFKLKCIAYGYPTPVITWKRGEEQLQSGGRVSIEESGQEL 280

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV 332
            I+ V  +D G YTC A N  G  + S  +TV+   +    P D     G+S    C + 
Sbjct: 281 VISTVENSDKGTYTCVASNTGGDDEFSTVVTVESAPYFPAPPSDETKGPGESVDIECRSE 340

Query: 333 SDPSLKLSIVWLRGSEP-IDFES 354
             P+   ++ WL   +P  DFES
Sbjct: 341 GVPA--PAVDWLVNGQPWADFES 361



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 123/303 (40%), Gaps = 24/303 (7%)

Query: 117 SIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRK 176
           ++ L+    P    +PE IN      +T  C+A+G+PEP  +W  +G  +     N R  
Sbjct: 15  TLTLAYDVPPSIVEQPESINGDTRLPLTLTCRATGIPEPSYYWYKDGA-LFDVDNNDRAS 73

Query: 177 VGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKT 235
           +    + IE+L  +D G Y C A N LG       +  LA   +      +   VD G+ 
Sbjct: 74  LDGGNLVIESLTTADDGQYQCFANNRLGTAMSQKIMTSLAFMDQFENTAPETIQVDQGRP 133

Query: 236 VVLTCRVF-----GAPKPEVNWIHNQKELT----GGRYTILETGDLKITDVAFADSGEYT 286
           + L C        G P P + W     + T      R      G+L  ++V  +D+  Y 
Sbjct: 134 LKLRCGGSPGVPNGNPAPLIYWTDAAAKPTPITYNARINQDPEGNLVFSNVIASDAKGYY 193

Query: 287 CFA-RNKLGTAQGSGSLT--------VKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
           C A  N +G++Q +  +T        V+    +  +P   E+ A ++  F+   ++    
Sbjct: 194 CQAINNVVGSSQRTPKVTLMVSDLPPVESGASLITKPAANEI-AIRTQLFKLKCIAYGYP 252

Query: 338 KLSIVWLRGSEPIDFESEPRF-VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              I W RG E    +S  R  ++ +   L ++     D G YTC A       E    +
Sbjct: 253 TPVITWKRGEE--QLQSGGRVSIEESGQELVISTVENSDKGTYTCVASNTGGDDEFSTVV 310

Query: 397 TVQ 399
           TV+
Sbjct: 311 TVE 313



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 110/265 (41%), Gaps = 19/265 (7%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
             P  +PS  T ++ I A +  V+W P+ P+   G   GY V  +  K   G  +++ V  
Sbjct: 821  APGASPSGVT-VEAISANEVNVTWEPIDPEDANGKLGGYNVY-YNVKIASGQDKQMCVK- 877

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
               +   V     A+     V AF  A  GP S+++  VT    PG V  L+ + + S  
Sbjct: 878  ---SPCVVGNLQAATTYEITVKAFTNAGEGPASDVVEVVTDSAPPGPVYKLK-VDVYSYR 933

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYR 579
              L W +P   NG L GY +    V    +G   E  P   D   T    A   P TKYR
Sbjct: 934  LVLNWQEPILTNGDLTGYNVIITPVVDETLGD-EENFPLAVDDDLTLIYEA--SPETKYR 990

Query: 580  IHLAGYTKAGDGAE-----SKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPH 634
            + +      GDG +     + +L   P K P   +  G  P++   +W  +  +   A  
Sbjct: 991  VEVLALNTIGDGEKTTEEPTTFLQGRPSK-PSGPDVDGIAPDHANFTWD-LSNLNPTASA 1048

Query: 635  FKYRIFWRRHNTGE--AWNQDDVLD 657
             + +   +  +TGE  +  Q DVLD
Sbjct: 1049 IEIQYRKKADDTGEFASSEQSDVLD 1073



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 23/196 (11%)

Query: 15  ILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI 74
           ++LNV++  I A      P    VTRK  V + +      C   G P P   W+  G  +
Sbjct: 408 VVLNVVS--IPARIPSFTP----VTRKLSV-VEDSSAAFTCHVEGRPTPTITWTFKGSVL 460

Query: 75  NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSY----SIDLSVLAAPYFTV 130
              D+ +      S++I +    D G+Y C   N + + + Y    S  L+VL     T+
Sbjct: 461 TNGDKYTIDELAGSIVINNALEVDSGAYECTAENSI-DGQDYEATGSATLTVLGKTIITL 519

Query: 131 EPEFINAAEEETVTFECKAS---GLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENL 187
            P  +   E+ T TF+C+ +    L +PE +W+ +G+ +     N  R        I+N 
Sbjct: 520 PPADLTVREDTTATFQCEITYDHELDKPETYWMKDGQRLEANQDNSLR--------IDNA 571

Query: 188 RKSDTGNYGCNATNSL 203
             S++G Y C    +L
Sbjct: 572 MFSNSGTYTCFVETTL 587


>gi|397522455|ref|XP_003831282.1| PREDICTED: contactin-6 isoform 1 [Pan paniscus]
          Length = 1028

 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 181/715 (25%), Positives = 303/715 (42%), Gaps = 76/715 (10%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    + S+      L I + +  D+G Y 
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQ--AILEIPNFQQEDEGFYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C  SN  G   +    L   A P +  + +    +  + + +ECKASG P P   W+ NG
Sbjct: 297 CIASNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDNLLWECKASGKPNPWYTWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++   P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 356 ERLN---PEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSK 412

Query: 224 AP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
           +P  K  +   G  +V+ C+    P+  ++W   ++ L    R  +LE G LKI ++  +
Sbjct: 413 SPVKKKSFVQVGGDIVIGCKPNAFPRAAISWKRGRETLRQSKRIFLLEDGSLKIYNITRS 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ GTA+ +GSL VKE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 473 DAGSYTCIATNQFGTAKNTGSLIVKERTVITVPPSKMDVTVGESIVLPCQVSHDPSIEVV 532

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            VW    + ID +       R    +   L +       SG+Y C  QT L+ + A A +
Sbjct: 533 FVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADI 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW    P +     + + +QT T          ++
Sbjct: 593 IVRGPPGPPEDVQ-VEDISSTTSQLSWR-AGPDN-NSPIQIFTIQTRTPFSVGWQAVATV 649

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA 512
            E++   G++    V    P  +   RV+A N    G PSE    +  +     V  +  
Sbjct: 650 PEIL--NGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNI 707

Query: 513 IPLGS--SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
              G   S   + W  +  E  NG   GY I ++ V  T      E++  + + +    +
Sbjct: 708 HGGGGSRSELVITWESIPEELQNGEGFGYIIMFRPVGSTTWSK--EKVSSV-ESSRFVYR 764

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS-----TPNNLVISWT 623
              + P + + + +  Y   G+G+ S        ++   +  RG+     + + + +SW 
Sbjct: 765 NESIIPLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSLQSFSASEMEVSWN 824

Query: 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWT 683
           A+                       AWN       R +  VL        YE   V  WT
Sbjct: 825 AI-----------------------AWN-------RNTGRVLG-------YE---VLYWT 844

Query: 684 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           +   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S  ++  T
Sbjct: 845 DDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGTGPSSPPVNVTT 898



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 163/660 (24%), Positives = 258/660 (39%), Gaps = 87/660 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC ++N   EA+      SV   P   V+                
Sbjct: 180 NLYIAKVEPSDVGNYTCFITNK--EAQR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 232

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ +V  EC A G P P+I W   +G P+   P   +       + I N ++
Sbjct: 233 FPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPL---PGKVKYSKSQAILEIPNFQQ 289

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A+N  G       + +    PE  +  ++ Y      ++  C+  G P P 
Sbjct: 290 EDEGFYECIASNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDNLLWECKASGKPNPW 348

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L       +E G L IT +  +DSG Y C A NK      +  L V     
Sbjct: 349 YTWLKNGERLNPEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAP 408

Query: 309 HITDQPEDYE--VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P   +  V+ G      C   + P  + +I W RG E +      R     D SL
Sbjct: 409 DFSKSPVKKKSFVQVGGDIVIGCKPNAFP--RAAISWKRGRETL--RQSKRIFLLEDGSL 464

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV------ 420
            +   +  D+G YTC A  +    +   +L V+         T+I V  +K  V      
Sbjct: 465 KIYNITRSDAGSYTCIATNQFGTAKNTGSLIVK-------ERTVITVPPSKMDVTVGESI 517

Query: 421 -----VSWNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKF 470
                VS +P         F G  +         E+ G  S+ +L++   +       K+
Sbjct: 518 VLPCQVSHDPSIEVVFVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQ--LHHSGKY 575

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
           +   +     L+            ++ +   G PG  + ++   + S+   L W      
Sbjct: 576 LCTVQTTLESLS-----------AVADIIVRGPPGPPEDVQVEDISSTTSQLSWRAGPDN 624

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           N  +  + I  Q+     VG   +  +P I +  T +A + GL P  +Y   +      G
Sbjct: 625 NSPIQIFTI--QTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIG 682

Query: 590 DG--AESKYLFY----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  +E   L      VP   P N+ G G + + LVI+W ++PE   N   F Y I +R 
Sbjct: 683 IGEPSEPSELLRTKASVPVVAPVNIHGGGGSRSELVITWESIPEELQNGEGFGYIIMFRP 742

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
             +   W+++ V     S  V  N+      P+E+KV       +GEGS+  + IV  GE
Sbjct: 743 VGS-TTWSKEKVSSVESSRFVYRNESIIPLSPFEVKV--GVYNNEGEGSLSTVTIVYSGE 799



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 164/718 (22%), Positives = 278/718 (38%), Gaps = 93/718 (12%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  +NP +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 339  CKASGKPNPWYTWLKNGERLNPEERIQIEN--GTLIITMLNVSDSGVYQCAAENKY-QII 395

Query: 115  SYSIDLSVLA-APYFTVEP----EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
              + +L VLA AP F+  P     F+    +  +   CK +  P   I W    + + Q+
Sbjct: 396  YANAELRVLASAPDFSKSPVKKKSFVQVGGD--IVIGCKPNAFPRAAISWKRGRETLRQS 453

Query: 170  PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
                  + G   + I N+ +SD G+Y C ATN  G   K+    ++     IT  P    
Sbjct: 454  KRIFLLEDG--SLKIYNITRSDAGSYTCIATNQFGTA-KNTGSLIVKERTVITVPPSKMD 510

Query: 230  TVDGKTVVLTCRVFGAPKPEVN--WIHN-----------QKELTGGRYTILETGDLKITD 276
               G+++VL C+V   P  EV   W  N             E  GG       GDL I +
Sbjct: 511  VTVGESIVLPCQVSHDPSIEVVFVWFFNGDVIDLKKGVAHFERIGGE----SVGDLMIRN 566

Query: 277  VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSD 334
            +    SG+Y C  +  L +      + V+        PED +VE   S T + +  A  D
Sbjct: 567  IQLHHSGKYLCTVQTTLESLSAVADIIVRGPP---GPPEDVQVEDISSTTSQLSWRAGPD 623

Query: 335  PSLKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
             +  + I  ++   P         + P  +    Y+ TV   S     ++   A   +  
Sbjct: 624  NNSPIQIFTIQTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGI 683

Query: 390  IEAQ-----ATLTVQVPLEAPSNFTLIQVIDAKKA--VVSWNPVSPQSLRGHFRGYKVQ- 441
             E             VP+ AP N   I      ++  V++W  +  +   G   GY +  
Sbjct: 684  GEPSEPSELLRTKASVPVVAPVN---IHGGGGSRSELVITWESIPEELQNGEGFGYIIMF 740

Query: 442  ------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
                  TW+++          V + ES        +P S    +V  +N    G  S + 
Sbjct: 741  RPVGSTTWSKEKVSSVESSRFVYRNES-------IIPLSPFEVKVGVYNNEGEGSLSTVT 793

Query: 496  SFVTPEGVP------GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGT 547
               + E  P       ++QS  A  +  S   + W    +  G ++GY++ Y     K +
Sbjct: 794  IVYSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDSKES 850

Query: 548  KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PF 602
             +G +      +S   TT   + GL+ +T Y   +  Y  AG G  S  +        P 
Sbjct: 851  MIGKI-----RVSGNVTTK-NITGLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPS 904

Query: 603  KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
            + P N+  +  T + L ++W  +  +E+ +    Y+I +R++      ++  +L+   + 
Sbjct: 905  QPPANIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQNRQ----SKTHILETNNTS 959

Query: 663  LVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 720
              L   P  + Y I++       DG  S  E+ + K  S ++   +F+  S +F  ++
Sbjct: 960  AELL-VPFEEDYLIEIRTVSDGGDGSSS-EEIRIPKMSSLSSRGIQFLEPSTHFLSIV 1015



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 136/380 (35%), Gaps = 44/380 (11%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK--HVEFSDQGSYT 103
           L   +V L C   G P P+  W ++G  I+ +        G SL I   H +  D G Y 
Sbjct: 41  LSKSEVVLNCAANGYPSPRYRWKQNGTDIDFTMSYHYRLDGGSLAINSPHTD-QDIGMYQ 99

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPEI----- 157
           C  +N +G   S    L       F T     ++  E + V   C     P P       
Sbjct: 100 CLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCG----PPPHFGDLSY 155

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY---------- 205
            W  N  P+     N RR V      + I  +  SD GNY C  TN              
Sbjct: 156 AWTFNDNPLYVQEDN-RRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPPTPL 214

Query: 206 ------VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKE 258
                 V  +    +    PE  +A KD       +V L C   G P P+++W   +   
Sbjct: 215 VQRTDGVMGEYEPKIEVRFPETIQAAKD------SSVKLECFALGNPVPDISWRRLDGSP 268

Query: 259 LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYE 318
           L G          L+I +    D G Y C A N  G     G L          + ++  
Sbjct: 269 LPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPPEWEQKIQNTY 328

Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQ 378
           +    +  + C A   P+   +  WL+  E ++ E     +Q  + +L +T  +  DSG 
Sbjct: 329 LSIYDNLLWECKASGKPNPWYT--WLKNGERLNPEER---IQIENGTLIITMLNVSDSGV 383

Query: 379 YTCRAQTELDFIEAQATLTV 398
           Y C A+ +   I A A L V
Sbjct: 384 YQCAAENKYQIIYANAELRV 403



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 105/286 (36%), Gaps = 32/286 (11%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L+ P FT EP    F     +  V   C A+G P P   W  NG  I        R  G
Sbjct: 22  LLSRPIFTQEPHDVIFPLDLSKSEVVLNCAANGYPSPRYRWKQNGTDIDFTMSYHYRLDG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            +          D G Y C ATN LG +         A+  +     +   +V +G+ VV
Sbjct: 82  GSLAINSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        W  N   L       R+   ETG+L I  V  +D G YTCF
Sbjct: 142 LLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCF 197

Query: 289 ARNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSL 337
             NK    + QG  +  V+    +  +         PE  +     S    C A+ +P  
Sbjct: 198 ITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            +S   L GS       + ++ +S    L +    + D G Y C A
Sbjct: 258 DISWRRLDGSP---LPGKVKYSKSQAI-LEIPNFQQEDEGFYECIA 299


>gi|358438315|ref|NP_001240317.1| neural cell adhesion molecule L1-like protein isoform 3 precursor
           [Homo sapiens]
          Length = 1171

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 177/713 (24%), Positives = 297/713 (41%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 269 LKGEILLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYGKTLKIENVSYQDKGNYRCT 327

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG P
Sbjct: 328 ASNFLGTA-THDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 386

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +   P      V P  I+  NL+ + T  Y C A+N  G +  +  ++V+   P I    
Sbjct: 387 VDNHP-FAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQTKD 445

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            + Y TV G +  L C  F +P+  V+W  +   K L G RY I E G L+I      D+
Sbjct: 446 GENYATVVGYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDA 505

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L 
Sbjct: 506 GSYSCWVENAIGKTAVTANLDIRNATKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLK 565

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y C A T LD       +TV 
Sbjct: 566 LSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVL 625

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +  +   +   Y V+    K+  G   EL   +
Sbjct: 626 DVPDPPENLHLSERQN-RSVRLTWEAGADHN--SNISEYIVEFEGNKEEPGRWEELTRVQ 682

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 683 GKKTTV-ILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 741

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 742 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 792

Query: 576 T--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G + + +  Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 793 VYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKD 852

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ +++        
Sbjct: 853 RVHGRLKGYQINW--------WKTKSLLDGRT-----------HPKEVNILRF------- 886

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 887 ---------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTPEG 930



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 138/648 (21%), Positives = 249/648 (38%), Gaps = 71/648 (10%)

Query: 54  FCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113
           +C F   P  +TI  K  +P+              L +  ++ ++  S + E+ +     
Sbjct: 202 YCCFAAFPRLRTIVQK--MPMK-------------LTVNSLKHANDSSSSTEIGSKANSI 246

Query: 114 KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           K     L  L  P  +     I   + E +  EC A GLP P++ W   G  + +     
Sbjct: 247 KQRKPKL--LLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKG---- 300

Query: 174 RRKVGPN---RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
            R+   N    + IEN+   D GNY C A+N LG    D +V ++   P  T+ P+    
Sbjct: 301 -RETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHV-IVEEPPRWTKKPQSAVY 358

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCF 288
             G   +L C   G P+P + W  N   +    +   ++   ++  T++    +  Y C 
Sbjct: 359 STGSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCE 418

Query: 289 ARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           A N  GT   + ++ V +   +  T   E+Y    G SA   C   + P   +S  W + 
Sbjct: 419 ASNVHGTILANANIDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS--WQKV 476

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPS 406
            E    E     +  N  +L + +++E D+G Y+C  +  +      A L ++       
Sbjct: 477 EEVKPLEGRRYHIYENG-TLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR------- 528

Query: 407 NFTLIQVIDAKKAVVSWNPV---SPQSLRGHFRGYKVQTWTEKDGEG------SIRELIV 457
           N T ++V      +   + +          H +     +W+ KDGE           +I+
Sbjct: 529 NATKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWS-KDGEAFEINGTEDGRIII 587

Query: 458 NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS 517
           +    T + V          +   A + A +      I+ VT   VP   ++L      +
Sbjct: 588 DGANLTISNVTLEDQGIYCCSAHTALDSAAD------ITQVTVLDVPDPPENLHLSERQN 641

Query: 518 SAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPST 576
            +  L W      N  +  Y ++++   G K  P   E L  +    TT   +  L P  
Sbjct: 642 RSVRLTWEAGADHNSNISEYIVEFE---GNKEEPGRWEELTRVQGKKTTV--ILPLAPFV 696

Query: 577 KYRIHLAGYTKAGDGAESKYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEH 630
           +Y+  +    + G    S+   +       P +NP N+  + S P  ++I W  +  +E 
Sbjct: 697 RYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQ 756

Query: 631 NAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           N P  +YR+ W+       W ++ V +     L +     + PY++KV
Sbjct: 757 NGPGLEYRVTWKPQGAPVEWEEETVTN---HTLRVMTPAVYAPYDVKV 801



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 128/539 (23%), Positives = 223/539 (41%), Gaps = 49/539 (9%)

Query: 88   SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
            +L I      D GSY+C V N +G+  + + +L +  A    V P+     +   +   C
Sbjct: 494  TLQINRTTEEDAGSYSCWVENAIGKT-AVTANLDIRNATKLRVSPKNPRIPKLHMLELHC 552

Query: 148  KA---SGLPEP-EIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202
            ++   S L    ++ W  +G+        + R  +    +TI N+   D G Y C+A  +
Sbjct: 553  ESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTA 612

Query: 203  LGYVYKDVYVNVLAHAPEITEAPKDEYTVD--GKTVVLTCRVFGAPKPE------VNWIH 254
            L        V VL    ++ + P++ +  +   ++V LT    GA          V +  
Sbjct: 613  LDSAADITQVTVL----DVPDPPENLHLSERQNRSVRLTWEA-GADHNSNISEYIVEFEG 667

Query: 255  NQKELTGGRYTILETGDLKITDVAFADSG----EYTCFARNKLGTAQGSGSLTVKEHTHI 310
            N++E   GR+  L     K T V    +     ++   A N++G +Q S      E    
Sbjct: 668  NKEE--PGRWEELTRVQGKKTTVILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPA 725

Query: 311  T--DQPEDYEVEAGQSAT-------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS 361
                 P++  V+A Q           +    + P L+  + W     P+++E E      
Sbjct: 726  APDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TV 781

Query: 362  NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKK 418
             +++L V   +         +A  +L       ++T+    + P    +I    VI++  
Sbjct: 782  TNHTLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTL 841

Query: 419  AVVSWNPVSPQSLRGHFRGYKVQTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPA 473
              V+W+ V    + G  +GY++  W  K   DG    +E+ + +  G+  +  V      
Sbjct: 842  VKVTWSTVPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAF 901

Query: 474  SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV 533
            S+    VLA+N    GP SE   F TPEGVP     L+ I +      L W  P++ NG 
Sbjct: 902  SEFHLTVLAYNSKGAGPESEPYIFQTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGN 961

Query: 534  LMGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            L GY ++YQ +  T ++G L +    I+ P+  S  L+ L  +TKY+ +L   T  G G
Sbjct: 962  LTGYLLQYQIINDTYEIGELNDI--NITTPSKPSWHLSNLNATTKYKFYLRACTSQGCG 1018



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 170/430 (39%), Gaps = 62/430 (14%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P   W+KDG P   +D   I   N G   I      S  QG Y C  SN
Sbjct: 54  QIECEAKGNPEPTFSWTKDGNPFYFTDHRIIPSNNSGTFRIPNEGHISHFQGKYRCFASN 113

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKP 165
            +G A S  I+  V + P F  E  + +   E + +   C    GLP   I+W++   + 
Sbjct: 114 KLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEH 173

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA- 218
           I Q       + G   +   N+ + D+ N Y C A        +  +   + VN L HA 
Sbjct: 174 IEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHAN 231

Query: 219 -------------------PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWI 253
                              P++   P +  +      + G+ ++L C   G P P+V+W 
Sbjct: 232 DSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWN 291

Query: 254 HNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD 312
               +L  GR T    G  LKI +V++ D G Y C A N LGTA     + V+E    T 
Sbjct: 292 KIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTK 351

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID---------FESEPRF--VQS 361
           +P+      G +    C A  +P  + +I W     P+D         F  E  F  +Q 
Sbjct: 352 KPQSAVYSTGSNGILLCEAEGEP--QPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQP 409

Query: 362 NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDA 416
           N  ++   ++S +     T  A   +D ++ +  +  +       +   S F   +   +
Sbjct: 410 NHTAVYQCEASNVHG---TILANANIDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFAS 466

Query: 417 KKAVVSWNPV 426
            +AVVSW  V
Sbjct: 467 PEAVVSWQKV 476



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 75/190 (39%), Gaps = 10/190 (5%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKP--ISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +E    EC+A G PEP   W  +G P   +     P    G  RI  E       G Y C
Sbjct: 50  DEYFQIECEAKGNPEPTFSWTKDGNPFYFTDHRIIPSNNSGTFRIPNEGHISHFQGKYRC 109

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN 255
            A+N LG    +    ++   P+  +   D   V +G  +VL C    G P   + W++ 
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNI 169

Query: 256 QKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTH 309
           + E      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV    H
Sbjct: 170 ELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKH 229

Query: 310 ITDQPEDYEV 319
             D     E+
Sbjct: 230 ANDSSSSTEI 239


>gi|194378322|dbj|BAG57911.1| unnamed protein product [Homo sapiens]
          Length = 956

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 181/715 (25%), Positives = 303/715 (42%), Gaps = 76/715 (10%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    + S+      L I + +  D+G Y 
Sbjct: 167 AAKDSSVKLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQ--AILEIPNFQQEDEGFYE 224

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C  SN  G   +    L   A P +  + +  + +  + + +ECKASG P P   W+ NG
Sbjct: 225 CIASNLRGRNLAKG-QLIFYAPPEWEQKIQNTHLSIYDNLLWECKASGKPNPWYTWLKNG 283

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++   P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 284 ERLN---PEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSK 340

Query: 224 AP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
           +P  K  +   G  +V+ C+    P+  ++W    + L    R  +LE G LKI ++  +
Sbjct: 341 SPVKKKSFVQVGGDIVIGCKPNAFPRAAISWKRGTETLRQSKRIFLLEDGSLKIYNITRS 400

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ GTA+ +GSL VKE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 401 DAGSYTCIATNQFGTAKNTGSLIVKERTVITVPPSKMDVTVGESIVLPCQVSHDPSIEVV 460

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            VW    + ID +       R    +   L +       SG+Y C  QT L+ + A A +
Sbjct: 461 FVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADI 520

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW    P +     + + +QT T          ++
Sbjct: 521 IVRGPPGPPEDVQ-VEDISSTTSQLSWR-AGPDN-NSPIQIFTIQTRTPFSVGWQAVATV 577

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA 512
            E++   G++    V    P  +   RV+A N    G PSE    +  +     V  +  
Sbjct: 578 PEIL--NGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNI 635

Query: 513 IPLGS--SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
              G   S   + W  +  E  NG   GY I ++ V  T      E++  + + +    +
Sbjct: 636 HGGGGSRSELVITWESIPEELQNGEGFGYIIMFRPVGSTTWSK--EKVSSV-ESSRFVYR 692

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS-----TPNNLVISWT 623
              + P + + + +  Y   G+G+ S        ++   +  RG+     + + + +SW 
Sbjct: 693 NESIIPLSPFEVKVGVYNDEGEGSLSTVTIVYSGEDEPQLAPRGTSLQSFSASEMEVSWN 752

Query: 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWT 683
           A+                       AWN       R +  VL        YE   V  WT
Sbjct: 753 AI-----------------------AWN-------RNTGRVLG-------YE---VLYWT 772

Query: 684 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           +   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S  ++  T
Sbjct: 773 DDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGTGPSSPPVNVTT 826



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 162/660 (24%), Positives = 259/660 (39%), Gaps = 87/660 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC ++N   EA+      SV   P   V+                
Sbjct: 108 NLYIAKVEPSDVGNYTCFITNK--EAQR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 160

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ +V  EC A G P P+I W   +G P+   P   +       + I N ++
Sbjct: 161 FPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPL---PGKVKYSKSQAILEIPNFQQ 217

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A+N  G       + +    PE  +  ++ +      ++  C+  G P P 
Sbjct: 218 EDEGFYECIASNLRGRNLAKGQL-IFYAPPEWEQKIQNTHLSIYDNLLWECKASGKPNPW 276

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L       +E G L IT +  +DSG Y C A NK      +  L V     
Sbjct: 277 YTWLKNGERLNPEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAP 336

Query: 309 HITDQPEDYE--VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P   +  V+ G      C   + P  + +I W RG+E +      R     D SL
Sbjct: 337 DFSKSPVKKKSFVQVGGDIVIGCKPNAFP--RAAISWKRGTETL--RQSKRIFLLEDGSL 392

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV------ 420
            +   +  D+G YTC A  +    +   +L V+         T+I V  +K  V      
Sbjct: 393 KIYNITRSDAGSYTCIATNQFGTAKNTGSLIVK-------ERTVITVPPSKMDVTVGESI 445

Query: 421 -----VSWNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKF 470
                VS +P         F G  +         E+ G  S+ +L++   +       K+
Sbjct: 446 VLPCQVSHDPSIEVVFVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQ--LHHSGKY 503

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
           +   +     L+            ++ +   G PG  + ++   + S+   L W      
Sbjct: 504 LCTVQTTLESLS-----------AVADIIVRGPPGPPEDVQVEDISSTTSQLSWRAGPDN 552

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           N  +  + I  Q+     VG   +  +P I +  T +A + GL P  +Y   +      G
Sbjct: 553 NSPIQIFTI--QTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIG 610

Query: 590 DG--AESKYLFY----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  +E   L      VP   P N+ G G + + LVI+W ++PE   N   F Y I +R 
Sbjct: 611 IGEPSEPSELLRTKASVPVVAPVNIHGGGGSRSELVITWESIPEELQNGEGFGYIIMFRP 670

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
             +   W+++ V     S  V  N+      P+E+KV       +GEGS+  + IV  GE
Sbjct: 671 VGS-TTWSKEKVSSVESSRFVYRNESIIPLSPFEVKV--GVYNDEGEGSLSTVTIVYSGE 727



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 167/720 (23%), Positives = 282/720 (39%), Gaps = 97/720 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +NP +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 267 CKASGKPNPWYTWLKNGERLNPEERIQIEN--GTLIITMLNVSDSGVYQCAAENKY-QII 323

Query: 115 SYSIDLSVLA-APYFTVEP----EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
             + +L VLA AP F+  P     F+    +  +   CK +  P   I W    + + Q+
Sbjct: 324 YANAELRVLASAPDFSKSPVKKKSFVQVGGD--IVIGCKPNAFPRAAISWKRGTETLRQS 381

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
                 + G   + I N+ +SD G+Y C ATN  G   K+    ++     IT  P    
Sbjct: 382 KRIFLLEDG--SLKIYNITRSDAGSYTCIATNQFGTA-KNTGSLIVKERTVITVPPSKMD 438

Query: 230 TVDGKTVVLTCRVFGAPKPEVN--WIHN-----------QKELTGGRYTILETGDLKITD 276
              G+++VL C+V   P  EV   W  N             E  GG       GDL I +
Sbjct: 439 VTVGESIVLPCQVSHDPSIEVVFVWFFNGDVIDLKKGVAHFERIGGE----SVGDLMIRN 494

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSD 334
           +    SG+Y C  +  L +      + V+        PED +VE   S T + +  A  D
Sbjct: 495 IQLHHSGKYLCTVQTTLESLSAVADIIVRGPP---GPPEDVQVEDISSTTSQLSWRAGPD 551

Query: 335 PSLKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            +  + I  ++   P         + P  +    Y+ TV   S     ++   A   +  
Sbjct: 552 NNSPIQIFTIQTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGI 611

Query: 390 IEAQ-----ATLTVQVPLEAPSNFTLIQVIDAKKA--VVSWNPVSPQSLRGHFRGYKVQ- 441
            E             VP+ AP N   I      ++  V++W  +  +   G   GY +  
Sbjct: 612 GEPSEPSELLRTKASVPVVAPVN---IHGGGGSRSELVITWESIPEELQNGEGFGYIIMF 668

Query: 442 ------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
                 TW+++          V + ES        +P S    +V  +N    G  S + 
Sbjct: 669 RPVGSTTWSKEKVSSVESSRFVYRNES-------IIPLSPFEVKVGVYNDEGEGSLSTVT 721

Query: 496 SFVTPEGVP-----GT-VQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGT 547
              + E  P     GT +QS  A  +  S   + W    +  G ++GY++ Y     K +
Sbjct: 722 IVYSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDSKES 778

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PF 602
            +G +      +S   TT   + GL+ +T Y   +  Y  AG G  S  +        P 
Sbjct: 779 MIGKI-----RVSGNVTTK-NITGLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPS 832

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQS- 661
           + P N+  +  T + L ++W  +  +E+ +    Y+I +R++      ++  +L+   + 
Sbjct: 833 QPPANIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQNRQ----SKTHILETNNTS 887

Query: 662 -ELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 720
            EL++   P  + Y I++       DG  S  E+ + K  S ++   +F+  S +F  ++
Sbjct: 888 AELLV---PFEEDYLIEIRTVSDGGDGSSS-EEIRIPKMSSLSSRGIQFLEPSTHFLSIV 943



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 81/214 (37%), Gaps = 29/214 (13%)

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPE 249
           D G Y C ATN LG +         A+  +     +   +V +G+ VVL C     P P 
Sbjct: 22  DIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLC----GPPPH 77

Query: 250 VN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCFARNKLG--TAQG 298
                  W  N   L       R+   ETG+L I  V  +D G YTCF  NK    + QG
Sbjct: 78  FGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQG 137

Query: 299 SGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEP 349
             +  V+    +  +         PE  +     S    C A+ +P   +S   L GS  
Sbjct: 138 PPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGS-- 195

Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
                + ++ +S    L +    + D G Y C A
Sbjct: 196 -PLPGKVKYSKSQAI-LEIPNFQQEDEGFYECIA 227


>gi|109732265|gb|AAI15767.1| Contactin 4 [Mus musculus]
          Length = 705

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 184/394 (46%), Gaps = 24/394 (6%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+P  +W + DG PI    R  + N    L I + +  D GSY 
Sbjct: 237 AEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGSYE 294

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P +      I+ A EE+V +ECKA+G P+P   W+ NG
Sbjct: 295 CVAENSRGKNVAKG-QLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNG 353

Query: 164 KPISQAPPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
            P+       R ++    G   ITI NL  SD G Y C A N  G ++    ++V+A +P
Sbjct: 354 DPLLT-----RDRIQIEQGTLNITIVNL--SDAGMYQCVAENKHGVIFSSAELSVIAESP 406

Query: 220 EITEAPKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITD 276
           + +       T+   G  VV+ C+   +P+P   W   ++ L    R TI E G+L+I +
Sbjct: 407 DFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIIN 466

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
           V  +D+G YTC A N  GTA  +G++ VK+ T +   P   +V  G+S    C    D S
Sbjct: 467 VTKSDAGSYTCIATNHFGTASSTGNVVVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHS 526

Query: 337 LKLSIVWLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           L +   W      IDF+ +         Q +   L +       +G+Y C  QT +D + 
Sbjct: 527 LDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLS 586

Query: 392 AQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
             A L V+ P   P   T+ ++ D   A +SW P
Sbjct: 587 VAADLIVRGPPGPPEAVTIDEITDT-TAQLSWRP 619



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 139/333 (41%), Gaps = 32/333 (9%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V+ PE + A
Sbjct: 178 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPA 237

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
            +  TV  EC A G P P I W   +GKPI++     RR      + I N ++ D G+Y 
Sbjct: 238 EKGTTVKLECFALGNPVPTILWRRADGKPIAR---KARRHKSNGILEIPNFQQEDAGSYE 294

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P   +   D +    ++V   C+  G PKP   W+ N 
Sbjct: 295 CVAENSRGKNVAKGQLTFYAQ-PNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNG 353

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
             L       +E G L IT V  +D+G Y C A NK G    S  L+V     I + P+ 
Sbjct: 354 DPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSV-----IAESPDF 408

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  +    W +G E I  E+E R   S D +L +
Sbjct: 409 SRTLLKRVTLVKVGGEVVIECKPKASP--RPVYTWRKGRE-ILRENE-RITISEDGNLRI 464

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
              ++ D+G YTC A        +   + V+ P
Sbjct: 465 INVTKSDAGSYTCIATNHFGTASSTGNVVVKDP 497



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 119/479 (24%), Positives = 183/479 (38%), Gaps = 48/479 (10%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  ++            SL+I +  +  D G+Y C  +
Sbjct: 44  KKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQCIAT 103

Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVHN 162
           N  G   S    L       F T     ++    + +   C   G P    E    W+ N
Sbjct: 104 NSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLC---GPPPHSGELSYAWIFN 160

Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN- 213
             P  Q   + RR V      + I  + KSD GNY C  TN+      LG     +  N 
Sbjct: 161 EYPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRND 217

Query: 214 --VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILET 269
             +  + P+I  + P+      G TV L C   G P P + W   + K +          
Sbjct: 218 GVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSN 277

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I +    D+G Y C A N  G     G LT     +      D  V   +S  + C
Sbjct: 278 GILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWEC 337

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   P  K +  WL+  +P+        +Q    +L +T  +  D+G Y C A+ +   
Sbjct: 338 KANGRP--KPTYRWLKNGDPLLTRDR---IQIEQGTLNITIVNLSDAGMYQCVAENKHGV 392

Query: 390 IEAQATLTVQVPLEAPS-------NFTLIQVIDAKKAVVSWNP-VSPQSLRGHFRGYKVQ 441
           I + A L+V    E+P          TL++V    + V+   P  SP+ +    +G ++ 
Sbjct: 393 IFSSAELSVIA--ESPDFSRTLLKRVTLVKV--GGEVVIECKPKASPRPVYTWRKGREIL 448

Query: 442 TWTEK---DGEGSIRELIVNK---GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
              E+     +G++R + V K   G  T    + F  AS     V+        PPS +
Sbjct: 449 RENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNVVVKDPTKVMVPPSSM 507



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 117/303 (38%), Gaps = 34/303 (11%)

Query: 119 DLSVLAAPYFTVEPEFIN---AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D   L  P F  EP  +     +EE+ V   C+  G P+P I W  NG  +     + R 
Sbjct: 19  DDYTLHGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIG-MDFRY 77

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            V    + I N  K+ D G Y C ATNS G +         A+        +   +V  G
Sbjct: 78  SVVDGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRG 137

Query: 234 KTVVLTCRVFGAPKPEVN-----WIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYT 286
           + +VL C     P P        WI N+        R+   ETG+L I  V  +D G YT
Sbjct: 138 QGMVLLC----GPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYT 193

Query: 287 CFARNK------LG-----TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           C   N       LG       +  G +   E       PE    E G +    C A+ +P
Sbjct: 194 CVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNP 253

Query: 336 SLKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
               +I+W R   +PI    + R  +SN   L +    + D+G Y C A+       A+ 
Sbjct: 254 V--PTILWRRADGKPI--ARKARRHKSNGI-LEIPNFQQEDAGSYECVAENSRGKNVAKG 308

Query: 395 TLT 397
            LT
Sbjct: 309 QLT 311


>gi|397522457|ref|XP_003831283.1| PREDICTED: contactin-6 isoform 2 [Pan paniscus]
          Length = 956

 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 181/715 (25%), Positives = 303/715 (42%), Gaps = 76/715 (10%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    + S+      L I + +  D+G Y 
Sbjct: 167 AAKDSSVKLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQ--AILEIPNFQQEDEGFYE 224

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C  SN  G   +    L   A P +  + +    +  + + +ECKASG P P   W+ NG
Sbjct: 225 CIASNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDNLLWECKASGKPNPWYTWLKNG 283

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++   P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 284 ERLN---PEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSK 340

Query: 224 AP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
           +P  K  +   G  +V+ C+    P+  ++W   ++ L    R  +LE G LKI ++  +
Sbjct: 341 SPVKKKSFVQVGGDIVIGCKPNAFPRAAISWKRGRETLRQSKRIFLLEDGSLKIYNITRS 400

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ GTA+ +GSL VKE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 401 DAGSYTCIATNQFGTAKNTGSLIVKERTVITVPPSKMDVTVGESIVLPCQVSHDPSIEVV 460

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            VW    + ID +       R    +   L +       SG+Y C  QT L+ + A A +
Sbjct: 461 FVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADI 520

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW    P +     + + +QT T          ++
Sbjct: 521 IVRGPPGPPEDVQ-VEDISSTTSQLSWR-AGPDN-NSPIQIFTIQTRTPFSVGWQAVATV 577

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA 512
            E++   G++    V    P  +   RV+A N    G PSE    +  +     V  +  
Sbjct: 578 PEIL--NGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNI 635

Query: 513 IPLGS--SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
              G   S   + W  +  E  NG   GY I ++ V  T      E++  + + +    +
Sbjct: 636 HGGGGSRSELVITWESIPEELQNGEGFGYIIMFRPVGSTTWSK--EKVSSV-ESSRFVYR 692

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS-----TPNNLVISWT 623
              + P + + + +  Y   G+G+ S        ++   +  RG+     + + + +SW 
Sbjct: 693 NESIIPLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSLQSFSASEMEVSWN 752

Query: 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWT 683
           A+                       AWN       R +  VL        YE   V  WT
Sbjct: 753 AI-----------------------AWN-------RNTGRVLG-------YE---VLYWT 772

Query: 684 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           +   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S  ++  T
Sbjct: 773 DDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGTGPSSPPVNVTT 826



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 163/660 (24%), Positives = 259/660 (39%), Gaps = 87/660 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC ++N   EA+      SV   P   V+                
Sbjct: 108 NLYIAKVEPSDVGNYTCFITNK--EAQR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 160

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ +V  EC A G P P+I W   +G P+   P   +       + I N ++
Sbjct: 161 FPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPL---PGKVKYSKSQAILEIPNFQQ 217

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A+N  G       + +    PE  +  ++ Y      ++  C+  G P P 
Sbjct: 218 EDEGFYECIASNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDNLLWECKASGKPNPW 276

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L       +E G L IT +  +DSG Y C A NK      +  L V     
Sbjct: 277 YTWLKNGERLNPEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAP 336

Query: 309 HITDQPEDYE--VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P   +  V+ G      C   + P  + +I W RG E +      R     D SL
Sbjct: 337 DFSKSPVKKKSFVQVGGDIVIGCKPNAFP--RAAISWKRGRETL--RQSKRIFLLEDGSL 392

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV------ 420
            +   +  D+G YTC A  +    +   +L V+         T+I V  +K  V      
Sbjct: 393 KIYNITRSDAGSYTCIATNQFGTAKNTGSLIVK-------ERTVITVPPSKMDVTVGESI 445

Query: 421 -----VSWNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKF 470
                VS +P         F G  +         E+ G  S+ +L++   +   +   K+
Sbjct: 446 VLPCQVSHDPSIEVVFVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHS--GKY 503

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
           +   +     L+            ++ +   G PG  + ++   + S+   L W      
Sbjct: 504 LCTVQTTLESLS-----------AVADIIVRGPPGPPEDVQVEDISSTTSQLSWRAGPDN 552

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           N  +  + I  Q+     VG   +  +P I +  T +A + GL P  +Y   +      G
Sbjct: 553 NSPIQIFTI--QTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIG 610

Query: 590 DG--AESKYLFY----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  +E   L      VP   P N+ G G + + LVI+W ++PE   N   F Y I +R 
Sbjct: 611 IGEPSEPSELLRTKASVPVVAPVNIHGGGGSRSELVITWESIPEELQNGEGFGYIIMFRP 670

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
             +   W+++ V     S  V  N+      P+E+KV       +GEGS+  + IV  GE
Sbjct: 671 VGS-TTWSKEKVSSVESSRFVYRNESIIPLSPFEVKV--GVYNNEGEGSLSTVTIVYSGE 727



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 164/718 (22%), Positives = 278/718 (38%), Gaps = 93/718 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +NP +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 267 CKASGKPNPWYTWLKNGERLNPEERIQIEN--GTLIITMLNVSDSGVYQCAAENKY-QII 323

Query: 115 SYSIDLSVLA-APYFTVEP----EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
             + +L VLA AP F+  P     F+    +  +   CK +  P   I W    + + Q+
Sbjct: 324 YANAELRVLASAPDFSKSPVKKKSFVQVGGD--IVIGCKPNAFPRAAISWKRGRETLRQS 381

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
                 + G   + I N+ +SD G+Y C ATN  G   K+    ++     IT  P    
Sbjct: 382 KRIFLLEDG--SLKIYNITRSDAGSYTCIATNQFGTA-KNTGSLIVKERTVITVPPSKMD 438

Query: 230 TVDGKTVVLTCRVFGAPKPEVN--WIHN-----------QKELTGGRYTILETGDLKITD 276
              G+++VL C+V   P  EV   W  N             E  GG       GDL I +
Sbjct: 439 VTVGESIVLPCQVSHDPSIEVVFVWFFNGDVIDLKKGVAHFERIGGE----SVGDLMIRN 494

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSD 334
           +    SG+Y C  +  L +      + V+        PED +VE   S T + +  A  D
Sbjct: 495 IQLHHSGKYLCTVQTTLESLSAVADIIVRGPP---GPPEDVQVEDISSTTSQLSWRAGPD 551

Query: 335 PSLKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            +  + I  ++   P         + P  +    Y+ TV   S     ++   A   +  
Sbjct: 552 NNSPIQIFTIQTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGI 611

Query: 390 IEAQ-----ATLTVQVPLEAPSNFTLIQVIDAKKA--VVSWNPVSPQSLRGHFRGYKVQ- 441
            E             VP+ AP N   I      ++  V++W  +  +   G   GY +  
Sbjct: 612 GEPSEPSELLRTKASVPVVAPVN---IHGGGGSRSELVITWESIPEELQNGEGFGYIIMF 668

Query: 442 ------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
                 TW+++          V + ES        +P S    +V  +N    G  S + 
Sbjct: 669 RPVGSTTWSKEKVSSVESSRFVYRNES-------IIPLSPFEVKVGVYNNEGEGSLSTVT 721

Query: 496 SFVTPEGVP------GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGT 547
              + E  P       ++QS  A  +  S   + W    +  G ++GY++ Y     K +
Sbjct: 722 IVYSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDSKES 778

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PF 602
            +G +      +S   TT   + GL+ +T Y   +  Y  AG G  S  +        P 
Sbjct: 779 MIGKI-----RVSGNVTTK-NITGLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPS 832

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
           + P N+  +  T + L ++W  +  +E+ +    Y+I +R++      ++  +L+   + 
Sbjct: 833 QPPANIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQNRQ----SKTHILETNNTS 887

Query: 663 LVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 720
             L   P  + Y I++       DG  S  E+ + K  S ++   +F+  S +F  ++
Sbjct: 888 AELL-VPFEEDYLIEIRTVSDGGDGSSS-EEIRIPKMSSLSSRGIQFLEPSTHFLSIV 943



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 81/214 (37%), Gaps = 29/214 (13%)

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPE 249
           D G Y C ATN LG +         A+  +     +   +V +G+ VVL C     P P 
Sbjct: 22  DIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLC----GPPPH 77

Query: 250 VN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCFARNKLG--TAQG 298
                  W  N   L       R+   ETG+L I  V  +D G YTCF  NK    + QG
Sbjct: 78  FGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQG 137

Query: 299 SGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEP 349
             +  V+    +  +         PE  +     S    C A+ +P   +S   L GS  
Sbjct: 138 PPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGS-- 195

Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
                + ++ +S    L +    + D G Y C A
Sbjct: 196 -PLPGKVKYSKSQAI-LEIPNFQQEDEGFYECIA 227


>gi|149714162|ref|XP_001487999.1| PREDICTED: contactin-1 isoform 2 [Equus caballus]
          Length = 1008

 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 187/727 (25%), Positives = 297/727 (40%), Gaps = 88/727 (12%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 231 PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 288

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G+Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 289 NIQLEDEGTYECEAENIRGKDKHHG-RIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 344

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 345 TGKPIPTIRWLKNGYSYHKG------ELRLYDVTFEN-----AGMYQCIAENTHGVIYAN 393

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 394 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 453

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 454 WEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENAT 513

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ +W      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 514 MQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 573

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            AQT +D   A A L V+ P   P     I+ I A    ++W+  S          Y +Q
Sbjct: 574 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYSIQ 630

Query: 442 TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           T T    D + +  +  + +G          +P  +   RV+A N    G PS   + + 
Sbjct: 631 TKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIK 690

Query: 500 PEGVPGTVQSLEAIPLGSS--AFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
            +G    V   +    G S     + W  +  E   G   GY + ++   G +   +   
Sbjct: 691 TDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVT 750

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTP 615
            P   D      K   + PST +++ +  +   GDG         P+             
Sbjct: 751 NP---DTGRYVHKDETMRPSTAFQVKVKAFNNKGDG---------PY------------- 785

Query: 616 NNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVL----ANQPTF 671
                S TA+     +AP              EA  +  V     SE+ +      +   
Sbjct: 786 -----SLTAVINSAQDAP-------------SEAPAEVGVKVLSSSEISVHWEHVVEKIV 827

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
           + Y+I+    W+  D E +   + V   E  +  ++  +P ++ F  V A N A  GPPS
Sbjct: 828 ESYQIRY---WSAHDKEAAAHRVQVTSQE-YSARLENLLPDTQYFVEVRACNSAGCGPPS 883

Query: 732 EIISFVT 738
           ++I   T
Sbjct: 884 DMIETFT 890



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 156/662 (23%), Positives = 250/662 (37%), Gaps = 95/662 (14%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 179 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTKPYPADIVV 236

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  + A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 237 QFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 293

Query: 191 DTGNYGCNATNSLGYVYKD-----VYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
           D G Y C A N  G   KD     +YV      PE  E   D     G  +   C   G 
Sbjct: 294 DEGTYECEAENIRG---KDKHHGRIYVQAF---PEWVEHINDTEVDIGSDLYWPCVATGK 347

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           P P + W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L + 
Sbjct: 348 PIPTIRWLKN-----GYSY---HKGELRLYDVTFENAGMYQCIAENTHGVIYANAELKIL 399

Query: 306 EHTHITDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
                 +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   
Sbjct: 400 ALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWE 455

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KK 418
           D SL +   +  D G YTC A+       +  TL +  P   + AP N  +    +A  +
Sbjct: 456 DGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENATMQ 515

Query: 419 AVVSWNPVSPQSLRGHFRGYKVQ-----------TWTEKDGEGSIRELIVNKGESTTTEV 467
              S++P    +    F GY +               + +GE  IR   +      T   
Sbjct: 516 CAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTA 575

Query: 468 DKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKP 527
              V  S   A ++                    G PG    L    + +++  L W + 
Sbjct: 576 QTIVDNSSASADLVV------------------RGPPGPPGGLRIEDIRATSVALTWSRG 617

Query: 528 EQPNGVLMGYKIKYQSV-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
              +  +  Y I+ +++     K  K  P     P I +    +A+   L P  +Y   +
Sbjct: 618 SDNHSPISKYSIQTKTILSDDWKDAKTDP-----PII-EGNMEAARAVDLIPWMEYEFRV 671

Query: 583 AGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
                 G G  S      K     P   P +V G G +   L I+W  +    H   +F 
Sbjct: 672 VATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNNFG 731

Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
           Y + ++  + GE W +  V +      V  ++ T +P   +++KV     + DG  S+  
Sbjct: 732 YIVAFKPFD-GEEWKKVTVTNPDTGRYVHKDE-TMRPSTAFQVKVKAFNNKGDGPYSLTA 789

Query: 694 LI 695
           +I
Sbjct: 790 VI 791



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 141/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   ++  SDR S    G +L+I + +   D G Y C  S
Sbjct: 50  KVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 107

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 108 NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 161

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 162 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 218

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 219 LIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 278

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +  G + V+      +   D EV+ G   
Sbjct: 279 STSGAVLKIFNIQLEDEGTYECEAENIRGKDKHHGRIYVQAFPEWVEHINDTEVDIGSDL 338

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+       + E R      Y +T       ++G Y C A+ 
Sbjct: 339 YWPCVATGKPI--PTIRWLKNGYSY-HKGELRL-----YDVTFE-----NAGMYQCIAEN 385

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 386 THGVIYANAELKI 398



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 104/276 (37%), Gaps = 26/276 (9%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   +     +    VG N +   
Sbjct: 37  PINTIYPE---ESPEGKVSLNCRARASPFPVYKWRMNNGDVDLTS-DRYSMVGGNLVINN 92

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   +
Sbjct: 93  PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 152

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 153 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 212

Query: 299 SGSL---------TVKEH-THITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                        T K +   I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 213 FSKFIPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV--PDIRWRKVLE 270

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           P+   +E   + ++   L +      D G Y C A+
Sbjct: 271 PMPSTAE---ISTSGAVLKIFNIQLEDEGTYECEAE 303



 Score = 43.9 bits (102), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+    ++V+ + +  V W  V  + +      Y+++ W+  D E +   + V   
Sbjct: 798 PSEAPAEVG-VKVLSSSEISVHWEHVVEKIVES----YQIRYWSAHDKEAAAHRVQVTSQ 852

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GPPS++I   T +  P     + +     S +
Sbjct: 853 E-YSARLENLLPDTQYFVEVRACNSAGCGPPSDMIETFTKKAPPSQPPRIISSIRSGSRY 911

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYK+ Y+
Sbjct: 912 IITWDHVVALSNESTVTGYKVLYR 935


>gi|148666978|gb|EDK99394.1| contactin 4 [Mus musculus]
          Length = 639

 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 184/394 (46%), Gaps = 24/394 (6%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+P  +W + DG PI    R  + N    L I + +  D GSY 
Sbjct: 171 AEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGSYE 228

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P +      I+ A EE+V +ECKA+G P+P   W+ NG
Sbjct: 229 CVAENSRGKNVAKG-QLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNG 287

Query: 164 KPISQAPPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
            P+       R ++    G   ITI NL  SD G Y C A N  G ++    ++V+A +P
Sbjct: 288 DPLLT-----RDRIQIEQGTLNITIVNL--SDAGMYQCVAENKHGVIFSSAELSVIAESP 340

Query: 220 EITEAPKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITD 276
           + +       T+   G  VV+ C+   +P+P   W   ++ L    R TI E G+L+I +
Sbjct: 341 DFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIIN 400

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
           V  +D+G YTC A N  GTA  +G++ VK+ T +   P   +V  G+S    C    D S
Sbjct: 401 VTKSDAGSYTCIATNHFGTASSTGNVVVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHS 460

Query: 337 LKLSIVWLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           L +   W      IDF+ +         Q +   L +       +G+Y C  QT +D + 
Sbjct: 461 LDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLS 520

Query: 392 AQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
             A L V+ P   P   T+ ++ D   A +SW P
Sbjct: 521 VAADLIVRGPPGPPEAVTIDEITDT-TAQLSWRP 553



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 162/433 (37%), Gaps = 67/433 (15%)

Query: 119 DLSVLAAPYFTVEPEFIN---AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D   L  P F  EP  +     +EE+ V   C+  G P+P I W  NG  +     + R 
Sbjct: 19  DDYTLHGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIG-MDFRY 77

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLG----------YVYKDVY------------- 211
            V    + I N  K+ D G Y C ATNS G          + Y + +             
Sbjct: 78  SVVDGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRG 137

Query: 212 --VNVLAHAPEITEAPKDEY----------TV---DGKTVVLTCRVFGAPKPEVNWIH-N 255
             + +L   P  +     EY          TV    G TV L C   G P P + W   +
Sbjct: 138 QGMVLLCGPPPHSGGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRAD 197

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE 315
            K +          G L+I +    D+G Y C A N  G     G LT     +      
Sbjct: 198 GKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIIN 257

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
           D  V   +S  + C A   P  K +  WL+  +P+        +Q    +L +T  +  D
Sbjct: 258 DIHVAMEESVFWECKANGRP--KPTYRWLKNGDPLLTRDR---IQIEQGTLNITIVNLSD 312

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPS-------NFTLIQVIDAKKAVVSWNP-VS 427
           +G Y C A+ +   I + A L+V    E+P          TL++V    + V+   P  S
Sbjct: 313 AGMYQCVAENKHGVIFSSAELSVIA--ESPDFSRTLLKRVTLVKV--GGEVVIECKPKAS 368

Query: 428 PQSLRGHFRGYKVQTWTEK---DGEGSIRELIVNK---GESTTTEVDKFVPASKNFARVL 481
           P+ +    +G ++    E+     +G++R + V K   G  T    + F  AS     V+
Sbjct: 369 PRPVYTWRKGREILRENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNVVV 428

Query: 482 AFNGAYNGPPSEI 494
                   PPS +
Sbjct: 429 KDPTKVMVPPSSM 441


>gi|301765666|ref|XP_002918250.1| PREDICTED: LOW QUALITY PROTEIN: contactin-2-like [Ailuropoda
           melanoleuca]
          Length = 1040

 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 171/623 (27%), Positives = 269/623 (43%), Gaps = 45/623 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+PQ  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 251 ALVGQQVTLECFAFGNPVPQIKWRKVDGSLSPQWATAE----PTLQIPSVSFEDEGTYEC 306

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           E  N  G   +    + V A P +      + A     + + C A+G P P + W+ NG+
Sbjct: 307 EAENSKGR-DTVQGRVIVQAQPEWLKVISDMEADIGSNLGWGCAAAGKPRPTVRWLRNGE 365

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           P++     PR +V    +    L   D+G Y C A N  G +Y    + V A AP+    
Sbjct: 366 PLAS---QPRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLN 422

Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           P         G  + + C+   APK  V W    + L    R T+   G L I +++ +D
Sbjct: 423 PVKRLIPAARGGEIAIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPGGTLIIRNISRSD 482

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+YTCFA N +G A  +G L+V++ T IT  P   ++  G S T +C+A  DP++ L+ 
Sbjct: 483 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDSLTLQCHASHDPTMDLTF 542

Query: 342 VWLRGSEPIDFE---SEPRFVQSNDY--SLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
           +W     PIDF+      R   + +    LT+  +     G+YTC AQT +D    +AT+
Sbjct: 543 IWTLDDFPIDFDKPGGHYRRASAKETVGDLTILNAQLRHGGKYTCMAQTVVDSASKEATV 602

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GSIR 453
            V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G+   +R
Sbjct: 603 LVRGPPGPPGGVVVRNIGDT-TVQLSWS----RGFDNHSPIAKYTLQARTVPAGKWKQVR 657

Query: 454 ELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGVPGTVQ 508
               N +G + T +V    P      RVLA N    G  +GP S+I    T E  P    
Sbjct: 658 TNPANIEGNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSKI---RTKEAAPSVAP 714

Query: 509 SLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565
           S  +   G+     + W  +  E  NG   GY + ++  +    G    R+P  +D    
Sbjct: 715 SGLSGGGGAPGELIVNWTPMSREYQNGDGFGYVLSFR--RQGSSGWQTARVPG-ADAQHF 771

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGSTPNNLVI 620
                 + P T + + + GY +  DG ES   L Y     P   P  V  +G + + + +
Sbjct: 772 VYSNDSVRPYTPFEVKIRGYNRRXDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNV 831

Query: 621 SWTAMPEIEHNAPHFKYRI-FWR 642
           +W    + + N     Y I +WR
Sbjct: 832 TWEPGQQ-DTNGILLGYEIRYWR 853



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 152/376 (40%), Gaps = 40/376 (10%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           +KV L C    +P     W  +G  + + P  R  Q   G  +I+   +  D G Y C  
Sbjct: 55  EKVTLACRARASPPATYRWKMNGTEMKLEPGSR-HQLVGGNLVIMNPTKAQDAGVYQCLA 113

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIH------- 158
           SN VG   S    L       F    EF     +   T E     LP  P  H       
Sbjct: 114 SNPVGTVVSREAVLR------FGFLQEFSKEERDPVRTHEGWGVMLPCNPPAHYPGLSYR 167

Query: 159 WVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY----- 211
           W+ N  P +  P + R  V      + I     SD GNY C AT+ + +  K V+     
Sbjct: 168 WLLNEFP-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQ 226

Query: 212 VNVLAH-----APEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           +N+ A      AP I    P + Y + G+ V L C  FG P P++ W      L+    T
Sbjct: 227 LNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPQIKWRKVDGSLSPQWAT 286

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
              T  L+I  V+F D G Y C A N  G     G + V+          D E + G + 
Sbjct: 287 AEPT--LQIPSVSFEDEGTYECEAENSKGRDTVQGRVIVQAQPEWLKVISDMEADIGSNL 344

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF-VQSNDYSLTVTKSSELDSGQYTCRAQ 384
            + C A   P  + ++ WLR  EP+   S+PR  V + D  L  +K S  DSG Y C A+
Sbjct: 345 GWGCAAAGKP--RPTVRWLRNGEPL--ASQPRVEVLAGD--LRFSKLSLEDSGMYQCVAE 398

Query: 385 TELDFIEAQATLTVQV 400
            +   I A A L VQ 
Sbjct: 399 NKHGTIYASAELAVQA 414



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 144/658 (21%), Positives = 228/658 (34%), Gaps = 83/658 (12%)

Query: 88  SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
           +L I     SD G+Y+C      + S     +K   ++L+     L AP      P    
Sbjct: 191 NLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDTRLFAPSIKARFPAETY 250

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + VT EC A G P P+I W      +S     P+       + I ++   D G Y 
Sbjct: 251 ALVGQQVTLECFAFGNPVPQIKWRKVDGSLS-----PQWATAEPTLQIPSVSFEDEGTYE 305

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       V V A  PE  +   D     G  +   C   G P+P V W+ N 
Sbjct: 306 CEAENSKGRDTVQGRVIVQAQ-PEWLKVISDMEADIGSNLGWGCAAAGKPRPTVRWLRNG 364

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
           + L       +  GDL+ + ++  DSG Y C A NK GT   S  L V+         P 
Sbjct: 365 EPLASQPRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPV 424

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
              + A +            + K  ++W +G+E +   S  R   +   +L +   S  D
Sbjct: 425 KRLIPAARGGEIAIPCQPRAAPKAVVLWSKGTEILVNSS--RVTVTPGGTLIIRNISRSD 482

Query: 376 SGQYTC-----------------RAQTELDFIEAQA--------TLTVQVPLEAPSNFTL 410
            G+YTC                 R  T++    + A        TL      +   + T 
Sbjct: 483 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDSLTLQCHASHDPTMDLTF 542

Query: 411 IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKF 470
           I  +D         P+      GH+R    +   E  G+ +I    +  G   T      
Sbjct: 543 IWTLDDF-------PIDFDKPGGHYRRASAK---ETVGDLTILNAQLRHGGKYTCMAQTV 592

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
           V ++   A VL                            +    +G +   L W +    
Sbjct: 593 VDSASKEATVLVRGPPG------------------PPGGVVVRNIGDTTVQLSWSRGFDN 634

Query: 531 NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGD 590
           +  +  Y ++ ++V   K   +    P   +    +A++ GL P   Y   +      G 
Sbjct: 635 HSPIAKYTLQARTVPAGKWKQVRTN-PANIEGNAETAQVLGLTPWMDYEFRVLASNILGT 693

Query: 591 GAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           G  S      +     P   P  + G G  P  L+++WT M     N   F Y + +RR 
Sbjct: 694 GEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYVLSFRRQ 753

Query: 645 NTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
            +   W    V        V +N     + P+E+K+       DG  S+  L+ +  E
Sbjct: 754 GS-SGWQTARVPGADAQHFVYSNDSVRPYTPFEVKIRGYNRRXDGPESLTALVYSAEE 810



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 136/602 (22%), Positives = 225/602 (37%), Gaps = 60/602 (9%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P+    R+        L    +   D G Y C   N  G   
Sbjct: 348 CAAAGKPRPTVRWLRNGEPLASQPRVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTIY 405

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F + P    I AA    +   C+    P+  + W    + +  +  
Sbjct: 406 A-SAELAVQALAPDFRLNPVKRLIPAARGGEIAIPCQPRAAPKAVVLWSKGTEILVNSS- 463

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V P   + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 464 --RVTVTPGGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 520

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G ++ L C     P  ++ +I    +        GG Y   +  ET GDL I +    
Sbjct: 521 NLGDSLTLQCHASHDPTMDLTFIWTLDDFPIDFDKPGGHYRRASAKETVGDLTILNAQLR 580

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE-----DYEVEAGQSATFRCNA-VSD 334
             G+YTC A+  + +A    ++ V+               D  V+   S  F  ++ ++ 
Sbjct: 581 HGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRNIGDTTVQLSWSRGFDNHSPIAK 640

Query: 335 PSLKLSIV----WLR-GSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQYTCRA 383
            +L+   V    W +  + P + E      Q        DY   V  S+ L +G+ +   
Sbjct: 641 YTLQARTVPAGKWKQVRTNPANIEGNAETAQVLGLTPWMDYEFRVLASNILGTGEPSG-P 699

Query: 384 QTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW 443
            +++   EA  ++                     + +V+W P+S +   G   GY +   
Sbjct: 700 SSKIRTKEAAPSVAPSG--------LSGGGGAPGELIVNWTPMSREYQNGDGFGYVLSFR 751

Query: 444 TEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGV 503
            +         +     +      D   P +    ++  +N   +GP S      + E  
Sbjct: 752 RQGSSGWQTARVPGADAQHFVYSNDSVRPYTPFEVKIRGYNRRXDGPESLTALVYSAEEE 811

Query: 504 PGTVQS-LEAIPLGSSAFYLKWVKPEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
           P    + + A  + SS   + W   +Q  NG+L+GY+I+Y      +      R   +  
Sbjct: 812 PRVAPTKVWAKGVSSSEMNVTWEPGQQDTNGILLGYEIRYWRAGDKEAAADRVRTAGLD- 870

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVIS 621
              T A++ GL P+TKY + +  Y +AG G  S        K P         P N  IS
Sbjct: 871 ---TRARVTGLHPNTKYHVTVRAYNRAGTGPASPSANATTMKPPPQ-----RPPGN--IS 920

Query: 622 WT 623
           WT
Sbjct: 921 WT 922



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 115/300 (38%), Gaps = 34/300 (11%)

Query: 125 APYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P F  +P    F   + EE VT  C+A   P     W  NG  +   P +  + VG N 
Sbjct: 36  GPVFEDQPLGLLFPEESTEEKVTLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNL 95

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTC 240
           + +   +  D G Y C A+N +G V     V       E ++  +D   T +G  V+L C
Sbjct: 96  VIMNPTKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVRTHEGWGVMLPC 155

Query: 241 RVFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGT 295
                 P     W+ N+      T GR+ + + TG+L I     +D G Y+C A + +  
Sbjct: 156 NPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDF 215

Query: 296 AQGSGSLTVKEHTHITDQPEDYEVEA---------------GQSATFRCNAVSDPSLKLS 340
           +  S      +   +    ED  + A               GQ  T  C A  +P  +  
Sbjct: 216 STKS---VFSKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPQ-- 270

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +    +D    P++  + + +L +   S  D G Y C A+        Q  + VQ 
Sbjct: 271 IKWRK----VDGSLSPQWATA-EPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRVIVQA 325


>gi|340712319|ref|XP_003394709.1| PREDICTED: protein sidekick-like [Bombus terrestris]
          Length = 2169

 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 172/639 (26%), Positives = 270/639 (42%), Gaps = 61/639 (9%)

Query: 53  LFCIFGGTPLPQ--TIWSKDGVPINPSDRIS---QGNYGKSLIIKHVEFSDQGSYTCEVS 107
           + CI     L +  T+W+KDG+PI  S RIS     ++ ++L +     +  G Y+C V 
Sbjct: 247 IHCIANARSLHELRTLWTKDGIPIENS-RISYSFNDSWNRTLALISANITYTGVYSCHVD 305

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET-------VTFECKASGLPEPEIHWV 160
              G   + +   +V+       +P FI   + ET       VT  C A G+P P+I W 
Sbjct: 306 LRSGGYPTVNASANVVVYE----KPTFITELKRETLSDYGSTVTLPCDAVGVPPPKITWF 361

Query: 161 HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
            N +P+               +TI+ L   D+G + C A+N  G      ++      P 
Sbjct: 362 RNAEPVDHLLGFRYALEEDGSLTIKKLTMDDSGMFQCLASNDAGEASSYTWLKAKTSGPI 421

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK---ELTGGRYTILETGDLKITDV 277
           +   P+++  +DGK   LTC    AP P   WI+N     E+  GR  +L+ GDL I  V
Sbjct: 422 MENGPQNQTILDGKDATLTCNAVAAPIPNTTWIYNDTIPVEI-AGRVQVLDNGDLLIAAV 480

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
              D+G+YTC   N+ G+  GS  LTV   T I   P D  V  G +A  +C   +DPS+
Sbjct: 481 KPNDAGKYTCIRANEAGSVNGSAYLTVLVRTQIIQPPVDTSVLLGYTAELQCKVSNDPSV 540

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
              I W   S+ I+ ++  R    ND +L +      D G+Y C   +        A L+
Sbjct: 541 LYDIAWFHNSQVINTQASQRVKMRNDGTLEIAAVRASDVGEYMCSVVSPGGNETRSARLS 600

Query: 398 V-QVPLEAPSNF--TLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGEGSI 452
           V ++P  AP N   + ++ I  +   VSW P       G+   + + VQ   E    G I
Sbjct: 601 VIELPF-APINVMASRVERISPRTINVSWVP----GFDGNSPTKKFIVQR-REVSDLGPI 654

Query: 453 RELIVN--------KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT----- 499
            +  +N          ++    ++    A+    RV A N    GPPS+  + V      
Sbjct: 655 PDSALNWITECNNVSAQNRWVLLNNLKAAAAYQFRVTAENSVGEGPPSDPSNVVVLPQEP 714

Query: 500 PEGVP-GTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLERL 556
           P G P G V S  +    SS    +W  P  E  NG ++GY ++Y+ + G    P    +
Sbjct: 715 PSGPPVGFVGSARS----SSEIITQWQLPLEEYRNGHILGYVLRYR-LYGYSDNPWT--I 767

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEGR 611
             I++    +  +  L     Y + +A Y   G G  ++ L       VP   P NV+  
Sbjct: 768 QNITNEAQRNYLITDLITWKDYIVQIAAYNDKGVGVFTEGLKIKTKEGVPEAPPTNVKVT 827

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRI-FWRRHNTGEA 649
                ++ + W      + N  +  Y++  W  HN  EA
Sbjct: 828 AINSTSIKVWWKPPNPQKINGINQGYKLQAWIGHNFTEA 866



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 149/609 (24%), Positives = 232/609 (38%), Gaps = 67/609 (11%)

Query: 34  KQQYVTRKKEVALRN--KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYG----K 87
           K  ++T  K   L +    V L C   G P P+  W ++  P+   D +    Y      
Sbjct: 325 KPTFITELKRETLSDYGSTVTLPCDAVGVPPPKITWFRNAEPV---DHLLGFRYALEEDG 381

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
           SL IK +   D G + C  SN  GEA SY+   +  + P     P+     + +  T  C
Sbjct: 382 SLTIKKLTMDDSGMFQCLASNDAGEASSYTWLKAKTSGPIMENGPQNQTILDGKDATLTC 441

Query: 148 KASGLPEPEIHWVHNGK-PISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGY 205
            A   P P   W++N   P+  A    R +V  N  + I  ++ +D G Y C   N  G 
Sbjct: 442 NAVAAPIPNTTWIYNDTIPVEIAG---RVQVLDNGDLLIAAVKPNDAGKYTCIRANEAGS 498

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKEL---T 260
           V    Y+ VL    +I + P D   + G T  L C+V   P    ++ W HN + +    
Sbjct: 499 VNGSAYLTVLVRT-QIIQPPVDTSVLLGYTAELQCKVSNDPSVLYDIAWFHNSQVINTQA 557

Query: 261 GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R  +   G L+I  V  +D GEY C   +  G    S  L+V E            VE
Sbjct: 558 SQRVKMRNDGTLEIAAVRASDVGEYMCSVVSPGGNETRSARLSVIELPFAPINVMASRVE 617

Query: 321 AGQSATFRCNAV-----SDPSLKLSIVWLRGSE--PIDFESEPRFVQSNDYSLT---VTK 370
                T   + V     + P+ K  +     S+  PI   +     + N+ S     V  
Sbjct: 618 RISPRTINVSWVPGFDGNSPTKKFIVQRREVSDLGPIPDSALNWITECNNVSAQNRWVLL 677

Query: 371 SSELDSGQYTCRAQTELDFIE---AQATLTVQVPLEAPSNFTLIQVIDAKKA---VVSWN 424
           ++   +  Y  R   E    E   +  +  V +P E PS   +  V  A+ +   +  W 
Sbjct: 678 NNLKAAAAYQFRVTAENSVGEGPPSDPSNVVVLPQEPPSGPPVGFVGSARSSSEIITQWQ 737

Query: 425 PVSPQSLRGHFRGY--KVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLA 482
               +   GH  GY  + + +   D   +I+  I N+ +      D  +       ++ A
Sbjct: 738 LPLEEYRNGHILGYVLRYRLYGYSDNPWTIQN-ITNEAQRNYLITD-LITWKDYIVQIAA 795

Query: 483 FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP---NGVLMGYKI 539
           +N    G  +E +   T EGVP    +   +   +S     W KP  P   NG+  GYK+
Sbjct: 796 YNDKGVGVFTEGLKIKTKEGVPEAPPTNVKVTAINSTSIKVWWKPPNPQKINGINQGYKL 855

Query: 540 --------------KYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
                         K  +V  +   PL E+          SA + GL+  T Y I +  +
Sbjct: 856 QAWIGHNFTEASEYKSMTVPPSLFDPLAEQ----------SAIMTGLKKYTLYNITVLCF 905

Query: 586 TKAGDGAES 594
           T  GDG +S
Sbjct: 906 TDPGDGEKS 914



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 97/406 (23%), Positives = 159/406 (39%), Gaps = 40/406 (9%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           N+   L C   G P P+  W KDGVP+  S+ ++   Y +   I+     D G Y C  +
Sbjct: 54  NRTKFLQCQARGNPQPKYKWFKDGVPL--SNELTSEPYFR---IQSTRREDAGVYHCVAT 108

Query: 108 NGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           N VG   S  I  +V     F   T     + +     +T     S  P P++ W  +  
Sbjct: 109 NDVGSIFSERITFAVAYMGVFEDLTERMVSVKSGSAAVLTLPPIESH-PAPDVTWFTSDG 167

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS-LGYVYKDVYVNVLAH------ 217
            +       +     + + I N  ++D G Y   A N+ LG      +  +         
Sbjct: 168 SLLYG---IKYASVHHTLLILNASENDQGLYRARAINTQLGKEENSPFFKLQVTGDANAE 224

Query: 218 -APEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVN--WIHNQKELTGGR--YTILETGD 271
            AP I   P+D   + D     + C        E+   W  +   +   R  Y+  ++ +
Sbjct: 225 VAPSIIVKPQDTQIIKDQDVTYIHCIANARSLHELRTLWTKDGIPIENSRISYSFNDSWN 284

Query: 272 --LKITDVAFADSGEYTCFARNKLG---TAQGSGSLTVKEH-THITDQPEDYEVEAGQSA 325
             L +       +G Y+C    + G   T   S ++ V E  T IT+   +   + G + 
Sbjct: 285 RTLALISANITYTGVYSCHVDLRSGGYPTVNASANVVVYEKPTFITELKRETLSDYGSTV 344

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
           T  C+AV  P  K  I W R +EP+D     R+    D SLT+ K +  DSG + C A  
Sbjct: 345 TLPCDAVGVPPPK--ITWFRNAEPVDHLLGFRYALEEDGSLTIKKLTMDDSGMFQCLASN 402

Query: 386 EL----DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVS 427
           +      +   +A  +  +    P N T   ++D K A ++ N V+
Sbjct: 403 DAGEASSYTWLKAKTSGPIMENGPQNQT---ILDGKDATLTCNAVA 445



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 24/202 (11%)

Query: 403  EAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGES 462
            EAP     +  I++    V W P +PQ + G  +GYK+Q W   +   +      ++ +S
Sbjct: 818  EAPPTNVKVTAINSTSIKVWWKPPNPQKINGINQGYKLQAWIGHNFTEA------SEYKS 871

Query: 463  TTTEVDKFVPASKNFA-------------RVLAFNGAYNGPPSEIISFVTPEGVPGTVQS 509
             T     F P ++  A              VL F    +G  S  +   T E VP  V++
Sbjct: 872  MTVPPSLFDPLAEQSAIMTGLKKYTLYNITVLCFTDPGDGEKSSPVQIRTREDVPEEVEN 931

Query: 510  LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKL 569
            L+   +   +  +KW  P++ NGVL+ Y++KY  +K       +E   + SD  T SAK+
Sbjct: 932  LQFENISDRSLTVKWNAPQEVNGVLIQYQLKYM-IKDVPDSLRVEN--FTSD--TLSAKI 986

Query: 570  AGLEPSTKYRIHLAGYTKAGDG 591
              L+  T Y+  +  +T  G G
Sbjct: 987  EHLQAMTHYKFEVVAWTSVGPG 1008



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 111/275 (40%), Gaps = 21/275 (7%)

Query: 123 LAAPYFTVEPEFIN--AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN 180
           L  P FT +P       +E  T   +C+A G P+P+  W  +G P+S             
Sbjct: 35  LQEPRFTTQPSSSGNILSENRTKFLQCQARGNPQPKYKWFKDGVPLSN------ELTSEP 88

Query: 181 RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLT 239
              I++ R+ D G Y C ATN +G ++ +     +A+     +  +   +V  G   VLT
Sbjct: 89  YFRIQSTRREDAGVYHCVATNDVGSIFSERITFAVAYMGVFEDLTERMVSVKSGSAAVLT 148

Query: 240 C-RVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQ 297
              +   P P+V W  +   L  G         L I + +  D G Y   A N +LG  +
Sbjct: 149 LPPIESHPAPDVTWFTSDGSLLYGIKYASVHHTLLILNASENDQGLYRARAINTQLGKEE 208

Query: 298 GS--------GSLTVKEHTHITDQPEDYEVEAGQSATF-RCNAVSDPSLKLSIVWLRGSE 348
            S        G    +    I  +P+D ++   Q  T+  C A +    +L  +W +   
Sbjct: 209 NSPFFKLQVTGDANAEVAPSIIVKPQDTQIIKDQDVTYIHCIANARSLHELRTLWTKDGI 268

Query: 349 PIDFES-EPRFVQSNDYSLTVTKSSELDSGQYTCR 382
           PI+       F  S + +L +  ++   +G Y+C 
Sbjct: 269 PIENSRISYSFNDSWNRTLALISANITYTGVYSCH 303



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 16/157 (10%)

Query: 480  VLAFNGAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWVKPE--QPNGVLMG 536
            VL FN    GP S  ++    E VP G  Q L+A P+ S+  +L+W  P+    NG L+G
Sbjct: 1605 VLPFNSEGEGPSSPPVTVYVGEAVPTGEPQHLKAEPISSTEVHLRWKPPQANMQNGDLLG 1664

Query: 537  YKIKYQSVKG-----TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            YKI Y           K    +E +P     +  +  L  L+  T+YRI +  +  AGDG
Sbjct: 1665 YKIFYLVTDSPQDLENKQEEEIEVVP----ASYLTHSLVFLDKYTEYRIQVLAFNPAGDG 1720

Query: 592  AESKYLFYVPFKN----PDNVEGRGSTPNNLVISWTA 624
              +  +     ++    P N++    T  +L +SW A
Sbjct: 1721 PRTPSITVRTKQDIPGPPHNLQFSEITMTSLRVSWEA 1757



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 4/136 (2%)

Query: 414  IDAKKAVVSWNPVSPQSLRGHFRGYKV---QTWTEKDGEGSIRELIVNKGESTTTEVDKF 470
            I + +  + W P       G   GYK+    T + +D E    E I     S  T    F
Sbjct: 1641 ISSTEVHLRWKPPQANMQNGDLLGYKIFYLVTDSPQDLENKQEEEIEVVPASYLTHSLVF 1700

Query: 471  VPASKNF-ARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQ 529
            +     +  +VLAFN A +GP +  I+  T + +PG   +L+   +  ++  + W  P+ 
Sbjct: 1701 LDKYTEYRIQVLAFNPAGDGPRTPSITVRTKQDIPGPPHNLQFSEITMTSLRVSWEAPKL 1760

Query: 530  PNGVLMGYKIKYQSVK 545
             NG ++GY + Y++ +
Sbjct: 1761 RNGEIVGYIVTYETAE 1776



 Score = 41.2 bits (95), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 16/185 (8%)

Query: 420  VVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTT-EVDKFVPASKNFA 478
            +V W  V  +   G   G+KV            + +  N   +TT  E+ KFV   +   
Sbjct: 1241 LVRWGDVPIEHQNGQIEGFKVYYGANARSAFQYKNIPSNTTFTTTLTELRKFV---QYHI 1297

Query: 479  RVLAF----NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
            +VLA+    +G  + PP  + +F   E  PG   ++    +  +   + W  PE PNG +
Sbjct: 1298 QVLAYTRLGDGTLSTPPVRVQTF---EDAPGPPSNVSFPDVSFTTARIIWDTPEDPNGEI 1354

Query: 535  MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            + YK+ +  +  ++     +  P  SD T    +  GLEP   Y   +   T+ G G  +
Sbjct: 1355 LAYKVMFH-LNNSQDHQFSKEFP-ASDRT---FRATGLEPEKYYMFSVTAQTRLGWGKTA 1409

Query: 595  KYLFY 599
              L +
Sbjct: 1410 YALVF 1414


>gi|426339216|ref|XP_004033554.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 3
           [Gorilla gorilla gorilla]
          Length = 1171

 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 177/713 (24%), Positives = 296/713 (41%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 269 LKGEILLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYGKTLKIENVSYQDKGNYRCT 327

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG P
Sbjct: 328 ASNFLGTA-THDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 386

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           +    P     V P  I+  NL+ + T  Y C A+N  G +  +  ++V+   P I    
Sbjct: 387 VDNH-PFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQTKD 445

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            + Y TV G +  L C  F +P+  V+W  +   K L G RY I E G L+I      D+
Sbjct: 446 GENYATVVGYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDA 505

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L 
Sbjct: 506 GSYSCWVENAIGKTAVTANLDIRNATKLRVSPKNPRIPKSHMLELHCESKCDSHLKHSLK 565

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y C A T LD       +TV 
Sbjct: 566 LSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVL 625

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +  +       Y V+    K+  G   EL   +
Sbjct: 626 DVPDPPENLHLSERQN-RSVRLTWEAGADHN--SDISEYIVEFEGNKEEPGRWDELTRVQ 682

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P  +   RV+A N      PS+      TP   P    Q++       
Sbjct: 683 GKKTTV-ILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 741

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 742 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 792

Query: 576 T--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G + + +  Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 793 VYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKD 852

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ +++        
Sbjct: 853 RVHGRLKGYQINW--------WKTKSLLDGRT-----------HPKEVNILRF------- 886

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 887 ---------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTPEG 930



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 139/651 (21%), Positives = 250/651 (38%), Gaps = 77/651 (11%)

Query: 54  FCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113
           +C F   P  +TI  K  +P+              L +  ++ ++  S + E+ +     
Sbjct: 202 YCCFAAFPRLRTIVQK--MPMK-------------LTVNSLKHANDSSSSTEIGSKANSI 246

Query: 114 KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           K     L  L  P  +     I   + E +  EC A GLP P++ W   G  + +     
Sbjct: 247 KQRKPKL--LLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKG---- 300

Query: 174 RRKVGPN---RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
            R+   N    + IEN+   D GNY C A+N LG    D +V ++   P  T+ P+    
Sbjct: 301 -RETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHV-IVEEPPRWTKKPQSAVY 358

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCF 288
             G   +L C   G P+P + W  N   +    +   ++   ++  T++    +  Y C 
Sbjct: 359 STGSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCE 418

Query: 289 ARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           A N  GT   + ++ V +   +  T   E+Y    G SA   C   + P   +S  W + 
Sbjct: 419 ASNVHGTILANANIDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS--WQKV 476

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPS 406
            E    E     +  N  +L + +++E D+G Y+C  +  +      A L ++       
Sbjct: 477 EEVKPLEGRRYHIYENG-TLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR------- 528

Query: 407 NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGES---T 463
                   +A K  VS  P +P+  + H      ++  +   + S++      GE+    
Sbjct: 529 --------NATKLRVS--PKNPRIPKSHMLELHCESKCDSHLKHSLKLSWSKDGEAFEIN 578

Query: 464 TTEVDKFVPASKNFA---RVLAFNGAYNGPP------SEIISFVTPEGVPGTVQSLEAIP 514
            TE  + +    N       L   G Y          +  I+ VT   VP   ++L    
Sbjct: 579 GTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSE 638

Query: 515 LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLE 573
             + +  L W      N  +  Y ++++   G K  P   + L  +    TT   +  L 
Sbjct: 639 RQNRSVRLTWEAGADHNSDISEYIVEFE---GNKEEPGRWDELTRVQGKKTTV--ILPLA 693

Query: 574 PSTKYRIHLAGYTKAGDGAESKYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPE 627
           P  +Y+  +    + G    S+   +       P +NP N+  + S P  ++I W  +  
Sbjct: 694 PFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKS 753

Query: 628 IEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           +E N P  +YR+ W+       W ++ V +     L +     + PY++KV
Sbjct: 754 MEQNGPGLEYRVTWKPQGAPVEWEEETVTN---HTLRVMTPAVYAPYDVKV 801



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 126/538 (23%), Positives = 222/538 (41%), Gaps = 47/538 (8%)

Query: 88   SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
            +L I      D GSY+C V N +G+  + + +L +  A    V P+     +   +   C
Sbjct: 494  TLQINRTTEEDAGSYSCWVENAIGKT-AVTANLDIRNATKLRVSPKNPRIPKSHMLELHC 552

Query: 148  KA---SGLPEP-EIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202
            ++   S L    ++ W  +G+        + R  +    +TI N+   D G Y C+A  +
Sbjct: 553  ESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTA 612

Query: 203  LGYVYKDVYVNVLAHAPEITEAPKDEYTVD--GKTVVLTCRVFGAPKPE-----VNWIHN 255
            L        V VL    ++ + P++ +  +   ++V LT         +     V +  N
Sbjct: 613  LDSAADITQVTVL----DVPDPPENLHLSERQNRSVRLTWEAGADHNSDISEYIVEFEGN 668

Query: 256  QKELTGGRYTILETGDLKITDVAFADSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT 311
            ++E   GR+  L     K T V    +     ++   A N++G +Q S      E     
Sbjct: 669  KEE--PGRWDELTRVQGKKTTVILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAA 726

Query: 312  --DQPEDYEVEAGQSAT-------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
                P++  V+A Q           +    + P L+  + W     P+++E E       
Sbjct: 727  PDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TVT 782

Query: 363  DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKA 419
            +++L V   +         +A  +L       ++T+    + P    +I    VI++   
Sbjct: 783  NHTLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLV 842

Query: 420  VVSWNPVSPQSLRGHFRGYKVQTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPAS 474
             V+W+ V    + G  +GY++  W  K   DG    +E+ + +  G+  +  V      S
Sbjct: 843  KVTWSTVPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFS 902

Query: 475  KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
            +    VLA+N    GP SE   F TPEGVP     L+ I +      L W  P++ NG L
Sbjct: 903  EFHLTVLAYNSKGAGPESEPYIFQTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGNL 962

Query: 535  MGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             GY ++YQ +  T ++G L +    I+ P+  S  L+ L  +TKY+ +L   T  G G
Sbjct: 963  TGYLLQYQIINDTYEIGELNDI--NITTPSKPSWHLSNLNATTKYKFYLRACTSQGCG 1018



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 109/430 (25%), Positives = 171/430 (39%), Gaps = 62/430 (14%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P   W+KDG P   +D   I+  N G   I      S  QG Y C  SN
Sbjct: 54  QIECEAKGNPEPTFSWTKDGNPFYFTDHRIITSNNSGTFRIPNEGHISHFQGKYRCFASN 113

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKP 165
            +G A S  I+  V + P F  E  + +   E + V   C    GLP   I+W++   + 
Sbjct: 114 KLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPVVLPCNPPKGLPPLHIYWMNIELEH 173

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA- 218
           I Q       + G   +   N+ + D+ N Y C A        +  +   + VN L HA 
Sbjct: 174 IEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHAN 231

Query: 219 -------------------PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWI 253
                              P++   P +  +      + G+ ++L C   G P P+V+W 
Sbjct: 232 DSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWN 291

Query: 254 HNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD 312
               +L  GR T    G  LKI +V++ D G Y C A N LGTA     + V+E    T 
Sbjct: 292 KIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTK 351

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID---------FESEPRF--VQS 361
           +P+      G +    C A  +P  + +I W     P+D         F  E  F  +Q 
Sbjct: 352 KPQSAVYSTGSNGILLCEAEGEP--QPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQP 409

Query: 362 NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDA 416
           N  ++   ++S +     T  A   +D ++ +  +  +       +   S F   +   +
Sbjct: 410 NHTAVYQCEASNVHG---TILANANIDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFAS 466

Query: 417 KKAVVSWNPV 426
            +AVVSW  V
Sbjct: 467 PEAVVSWQKV 476



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 92/244 (37%), Gaps = 21/244 (8%)

Query: 86  GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTF 145
           G+ LI+  + F  + S   E+ + V +  +      V  A  F           +E    
Sbjct: 7   GRGLIVSLIFFLLKFSKAIEIPSSVQQVPTIIKQSKVQVAFPF-----------DEYFQI 55

Query: 146 ECKASGLPEPEIHWVHNGKP--ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSL 203
           EC+A G PEP   W  +G P   +          G  RI  E       G Y C A+N L
Sbjct: 56  ECEAKGNPEPTFSWTKDGNPFYFTDHRIITSNNSGTFRIPNEGHISHFQGKYRCFASNKL 115

Query: 204 GYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHNQKELT- 260
           G    +    ++   P+  +   D   V +G  VVL C    G P   + W++ + E   
Sbjct: 116 GIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPVVLPCNPPKGLPPLHIYWMNIELEHIE 175

Query: 261 -GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTHITDQPE 315
              R  + + GDL   +V   DS  +Y CFA   R +    +    LTV    H  D   
Sbjct: 176 QDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHANDSSS 235

Query: 316 DYEV 319
             E+
Sbjct: 236 STEI 239


>gi|350417616|ref|XP_003491509.1| PREDICTED: protein sidekick-like [Bombus impatiens]
          Length = 2168

 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 172/639 (26%), Positives = 270/639 (42%), Gaps = 61/639 (9%)

Query: 53  LFCIFGGTPLPQ--TIWSKDGVPINPSDRIS---QGNYGKSLIIKHVEFSDQGSYTCEVS 107
           + CI     L +  T+W+KDG+PI  S RIS     ++ ++L +     +  G Y+C V 
Sbjct: 246 IHCIANARSLHELRTLWTKDGIPIENS-RISYSFNDSWNRTLALISANITYTGVYSCHVD 304

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET-------VTFECKASGLPEPEIHWV 160
              G   + +   +V+       +P FI   + ET       VT  C A G+P P+I W 
Sbjct: 305 LRSGGYPTVNASANVVVYE----KPTFITELKRETLSDYGSTVTLPCDAVGVPPPKITWF 360

Query: 161 HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
            N +P+               +TI+ L   D+G + C A+N  G      ++      P 
Sbjct: 361 RNAEPVDHLLGFRYALEEDGSLTIKKLTMDDSGMFQCLASNDAGEASSYTWLKAKTSGPI 420

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK---ELTGGRYTILETGDLKITDV 277
           +   P+++  +DGK   LTC    AP P   WI+N     E+  GR  +L+ GDL I  V
Sbjct: 421 MENGPQNQTILDGKDATLTCNAVAAPIPNTTWIYNDTIPVEI-AGRVQVLDNGDLLIAAV 479

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
              D+G+YTC   N+ G+  GS  LTV   T I   P D  V  G +A  +C   +DPS+
Sbjct: 480 KPNDAGKYTCIRANEAGSVNGSAYLTVLVRTQIIQPPVDTSVLLGYTAELQCKVSNDPSV 539

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
              I W   S+ I+ ++  R    ND +L +      D G+Y C   +        A L+
Sbjct: 540 LYDIAWFHNSQVINTQASQRVKMRNDGTLEIAAVRASDVGEYMCSVVSPGGNETRSARLS 599

Query: 398 V-QVPLEAPSNF--TLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGEGSI 452
           V ++P  AP N   + ++ I  +   VSW P       G+   + + VQ   E    G I
Sbjct: 600 VIELPF-APINVMASRVERISPRTINVSWVP----GFDGNSPTKKFIVQR-REVSDLGPI 653

Query: 453 RELIVN--------KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT----- 499
            +  +N          ++    ++    A+    RV A N    GPPS+  + V      
Sbjct: 654 PDSALNWITECNNVSAQNRWVLLNNLKAAAAYQFRVTAENSVGEGPPSDPSNVVVLPQEP 713

Query: 500 PEGVP-GTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLERL 556
           P G P G V S  +    SS    +W  P  E  NG ++GY ++Y+ + G    P    +
Sbjct: 714 PSGPPVGFVGSARS----SSEIITQWQLPLEEYRNGHILGYVLRYR-LYGYNDNPWT--I 766

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEGR 611
             I++    +  +  L     Y + +A Y   G G  ++ L       VP   P NV+  
Sbjct: 767 QNITNEAQRNYLITDLITWKDYIVQIAAYNDKGVGVFTEGLKIKTKEGVPEAPPTNVKVT 826

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRI-FWRRHNTGEA 649
                ++ + W      + N  +  Y++  W  HN  EA
Sbjct: 827 AINSTSIKVWWKPPNPQKINGINQGYKLQAWIGHNFTEA 865



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 149/609 (24%), Positives = 232/609 (38%), Gaps = 67/609 (11%)

Query: 34  KQQYVTRKKEVALRN--KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYG----K 87
           K  ++T  K   L +    V L C   G P P+  W ++  P+   D +    Y      
Sbjct: 324 KPTFITELKRETLSDYGSTVTLPCDAVGVPPPKITWFRNAEPV---DHLLGFRYALEEDG 380

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
           SL IK +   D G + C  SN  GEA SY+   +  + P     P+     + +  T  C
Sbjct: 381 SLTIKKLTMDDSGMFQCLASNDAGEASSYTWLKAKTSGPIMENGPQNQTILDGKDATLTC 440

Query: 148 KASGLPEPEIHWVHNGK-PISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGY 205
            A   P P   W++N   P+  A    R +V  N  + I  ++ +D G Y C   N  G 
Sbjct: 441 NAVAAPIPNTTWIYNDTIPVEIAG---RVQVLDNGDLLIAAVKPNDAGKYTCIRANEAGS 497

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKEL---T 260
           V    Y+ VL    +I + P D   + G T  L C+V   P    ++ W HN + +    
Sbjct: 498 VNGSAYLTVLVRT-QIIQPPVDTSVLLGYTAELQCKVSNDPSVLYDIAWFHNSQVINTQA 556

Query: 261 GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R  +   G L+I  V  +D GEY C   +  G    S  L+V E            VE
Sbjct: 557 SQRVKMRNDGTLEIAAVRASDVGEYMCSVVSPGGNETRSARLSVIELPFAPINVMASRVE 616

Query: 321 AGQSATFRCNAV-----SDPSLKLSIVWLRGSE--PIDFESEPRFVQSNDYSLT---VTK 370
                T   + V     + P+ K  +     S+  PI   +     + N+ S     V  
Sbjct: 617 RISPRTINVSWVPGFDGNSPTKKFIVQRREVSDLGPIPDSALNWITECNNVSAQNRWVLL 676

Query: 371 SSELDSGQYTCRAQTELDFIE---AQATLTVQVPLEAPSNFTLIQVIDAKKA---VVSWN 424
           ++   +  Y  R   E    E   +  +  V +P E PS   +  V  A+ +   +  W 
Sbjct: 677 NNLKAAAAYQFRVTAENSVGEGPPSDPSNVVVLPQEPPSGPPVGFVGSARSSSEIITQWQ 736

Query: 425 PVSPQSLRGHFRGY--KVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLA 482
               +   GH  GY  + + +   D   +I+  I N+ +      D  +       ++ A
Sbjct: 737 LPLEEYRNGHILGYVLRYRLYGYNDNPWTIQN-ITNEAQRNYLITD-LITWKDYIVQIAA 794

Query: 483 FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP---NGVLMGYKI 539
           +N    G  +E +   T EGVP    +   +   +S     W KP  P   NG+  GYK+
Sbjct: 795 YNDKGVGVFTEGLKIKTKEGVPEAPPTNVKVTAINSTSIKVWWKPPNPQKINGINQGYKL 854

Query: 540 --------------KYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
                         K  +V  +   PL E+          SA + GL+  T Y I +  +
Sbjct: 855 QAWIGHNFTEASEYKSMTVPPSLFDPLAEQ----------SAIMTGLKKYTLYNITVLCF 904

Query: 586 TKAGDGAES 594
           T  GDG +S
Sbjct: 905 TDPGDGEKS 913



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 98/406 (24%), Positives = 159/406 (39%), Gaps = 41/406 (10%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           N+   L C   G P P+  W KDGVP+  S+ ++   Y +   I+     D G Y C  +
Sbjct: 54  NRTKFLQCQARGNPQPKYKWFKDGVPL--SNELTSEPYFR---IQSTRREDAGVYHCVAT 108

Query: 108 NGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           N VG   S  I  +V     F   T     + +     +T     S  P P++ W  +  
Sbjct: 109 NDVGSIFSERITFAVAYMGVFEDLTERMVSVKSGSAAVLTLPPIESH-PAPDVTWFTSDG 167

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS-LGYVYKDVYVNVLAH------ 217
            +       +     + + I N  +SD G Y   A N+ LG      +  +         
Sbjct: 168 SLYGI----KYASVHHTLLILNASESDQGLYRARAINTQLGKEENSPFFKLQVTGDANAE 223

Query: 218 -APEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVN--WIHNQKELTGGR--YTILETGD 271
            AP I   P+D   + D     + C        E+   W  +   +   R  Y+  ++ +
Sbjct: 224 VAPSIIVKPQDTQIIKDQDVTYIHCIANARSLHELRTLWTKDGIPIENSRISYSFNDSWN 283

Query: 272 --LKITDVAFADSGEYTCFARNKLG---TAQGSGSLTVKEH-THITDQPEDYEVEAGQSA 325
             L +       +G Y+C    + G   T   S ++ V E  T IT+   +   + G + 
Sbjct: 284 RTLALISANITYTGVYSCHVDLRSGGYPTVNASANVVVYEKPTFITELKRETLSDYGSTV 343

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
           T  C+AV  P  K  I W R +EP+D     R+    D SLT+ K +  DSG + C A  
Sbjct: 344 TLPCDAVGVPPPK--ITWFRNAEPVDHLLGFRYALEEDGSLTIKKLTMDDSGMFQCLASN 401

Query: 386 EL----DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVS 427
           +      +   +A  +  +    P N T   ++D K A ++ N V+
Sbjct: 402 DAGEASSYTWLKAKTSGPIMENGPQNQT---ILDGKDATLTCNAVA 444



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 115/275 (41%), Gaps = 22/275 (8%)

Query: 123 LAAPYFTVEPEFIN--AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN 180
           L  P FT +P       +E  T   +C+A G P+P+  W  +G P+S             
Sbjct: 35  LQEPRFTTQPSSSGNILSENRTKFLQCQARGNPQPKYKWFKDGVPLSN------ELTSEP 88

Query: 181 RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLT 239
              I++ R+ D G Y C ATN +G ++ +     +A+     +  +   +V  G   VLT
Sbjct: 89  YFRIQSTRREDAGVYHCVATNDVGSIFSERITFAVAYMGVFEDLTERMVSVKSGSAAVLT 148

Query: 240 C-RVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQ 297
              +   P P+V W  +   L G +Y  +    L I + + +D G Y   A N +LG  +
Sbjct: 149 LPPIESHPAPDVTWFTSDGSLYGIKYASVH-HTLLILNASESDQGLYRARAINTQLGKEE 207

Query: 298 GS--------GSLTVKEHTHITDQPEDYEVEAGQSATF-RCNAVSDPSLKLSIVWLRGSE 348
            S        G    +    I  +P+D ++   Q  T+  C A +    +L  +W +   
Sbjct: 208 NSPFFKLQVTGDANAEVAPSIIVKPQDTQIIKDQDVTYIHCIANARSLHELRTLWTKDGI 267

Query: 349 PIDFES-EPRFVQSNDYSLTVTKSSELDSGQYTCR 382
           PI+       F  S + +L +  ++   +G Y+C 
Sbjct: 268 PIENSRISYSFNDSWNRTLALISANITYTGVYSCH 302



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 24/202 (11%)

Query: 403  EAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGES 462
            EAP     +  I++    V W P +PQ + G  +GYK+Q W   +   +      ++ +S
Sbjct: 817  EAPPTNVKVTAINSTSIKVWWKPPNPQKINGINQGYKLQAWIGHNFTEA------SEYKS 870

Query: 463  TTTEVDKFVPASKNFA-------------RVLAFNGAYNGPPSEIISFVTPEGVPGTVQS 509
             T     F P ++  A              VL F    +G  S  +   T E +P  V++
Sbjct: 871  MTVPPSLFDPLAEQSAIMTGLKKYTLYNITVLCFTDPGDGEKSSPVQIRTREDIPEEVEN 930

Query: 510  LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKL 569
            L+   +   +  +KW  P++ NGVL+ Y++KY  +K       +E   + SD  T SAK+
Sbjct: 931  LQFENISDRSLTVKWNAPQEVNGVLIQYQLKYM-IKDVPDSLRVEN--FTSD--TLSAKI 985

Query: 570  AGLEPSTKYRIHLAGYTKAGDG 591
              L+  T Y+  +  +T  G G
Sbjct: 986  EHLQAMTHYKFEVVAWTSIGPG 1007



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 16/157 (10%)

Query: 480  VLAFNGAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWVKPE--QPNGVLMG 536
            VL FN    GP S  ++    E VP G  Q L+A P+ S+  +L+W  P+    NG L+G
Sbjct: 1604 VLPFNSEGEGPSSPPVTVYVGEAVPTGEPQHLKAEPISSTEVHLRWKPPQANMQNGDLLG 1663

Query: 537  YKIKYQSVKG-----TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            YKI Y           K    +E +P     +  +  L  L+  T+YRI +  +  AGDG
Sbjct: 1664 YKIFYLVTDSPQDLENKQEEEIEVVP----ASYLTHSLVFLDKYTEYRIQVLAFNPAGDG 1719

Query: 592  AESKYLFYVPFKN----PDNVEGRGSTPNNLVISWTA 624
              +  +     ++    P N++    T  +L +SW A
Sbjct: 1720 PRTPSITVRTKQDIPGPPHNLQFSEITMTSLRVSWEA 1756



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 4/136 (2%)

Query: 414  IDAKKAVVSWNPVSPQSLRGHFRGYKV---QTWTEKDGEGSIRELIVNKGESTTTEVDKF 470
            I + +  + W P       G   GYK+    T + +D E    E I     S  T    F
Sbjct: 1640 ISSTEVHLRWKPPQANMQNGDLLGYKIFYLVTDSPQDLENKQEEEIEVVPASYLTHSLVF 1699

Query: 471  VPASKNF-ARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQ 529
            +     +  +VLAFN A +GP +  I+  T + +PG   +L+   +  ++  + W  P+ 
Sbjct: 1700 LDKYTEYRIQVLAFNPAGDGPRTPSITVRTKQDIPGPPHNLQFSEITMTSLRVSWEAPKL 1759

Query: 530  PNGVLMGYKIKYQSVK 545
             NG ++GY + Y++ +
Sbjct: 1760 RNGEIVGYIVTYETAE 1775



 Score = 41.2 bits (95), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 16/185 (8%)

Query: 420  VVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTT-EVDKFVPASKNFA 478
            +V W  V  +   G   G+KV            + +  N   +TT  E+ KFV   +   
Sbjct: 1240 LVRWGDVPIEHQNGQIEGFKVYYGANARSAFQYKNIPSNTTFTTTLTELRKFV---QYHI 1296

Query: 479  RVLAF----NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
            +VLA+    +G  + PP  + +F   E  PG   ++    +  +   + W  PE PNG +
Sbjct: 1297 QVLAYTRLGDGTLSTPPVRVQTF---EDAPGPPSNVSFPDVSFTTARIIWDTPEDPNGEI 1353

Query: 535  MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            + YK+ +  +  ++     +  P  SD T    +  GLEP   Y   +   T+ G G  +
Sbjct: 1354 LAYKVMFH-LNNSQDHQFSKEFP-ASDRT---FRATGLEPEKYYMFSVTAQTRLGWGKTA 1408

Query: 595  KYLFY 599
              L +
Sbjct: 1409 YALVF 1413


>gi|326668796|ref|XP_684096.5| PREDICTED: contactin-3-like [Danio rerio]
          Length = 1026

 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 160/626 (25%), Positives = 266/626 (42%), Gaps = 52/626 (8%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           A +   ++L C   G P+P+  W +    ++  +++   N    L I   +  D G+Y C
Sbjct: 242 AAKGSALKLECFALGNPVPRISWRRTS-DVSFPNKVKLKNSNAILEIPSFQQEDTGTYEC 300

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N  G+  +    +S  A P++         + EE + +ECKA+G P+P   W+ NG+
Sbjct: 301 IAENSRGKNAARG-RVSFHATPHWLQTMTDTAMSIEENLFWECKANGKPKPSYSWLKNGE 359

Query: 165 P-ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             IS+     R ++    ++I +L  SD G Y C A N  G +Y    + VLA AP  ++
Sbjct: 360 SLISEG----RVQIENGALSIFSLNLSDGGMYQCVAENKHGIIYSSAELMVLASAPSFSQ 415

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL-ETGDLKITDVAFA 280
            P  +      G  V L CR   +P+    W    + L     T L   G LKIT++   
Sbjct: 416 NPLSQTLKARSGSDVSLDCRPHASPRAISLWKRGTEILQRNERTFLFPNGTLKITNITKR 475

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D G YTC A+N+ GTA  +G L + E T I+  P   E+  G+S    C   +DP+L ++
Sbjct: 476 DGGSYTCVAKNQFGTASTTGKLIITEPTRISQSPSSTEITVGESVVLPCQVTADPALDVA 535

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLT---VTKSSELD-SGQYTCRAQTELDFIEAQATL 396
             W    +PIDF  +    +    S +   + ++ +L+  G+Y C   T+++ + A A L
Sbjct: 536 FSWAFNGQPIDFHQDADHFERVGGSFSGDLMIRNIQLNHGGKYVCLVDTDVESLSADAIL 595

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-------TWTEKDGE 449
            V+ P  +P +  +++ +    A +SW+P   Q       GY +Q        W   D  
Sbjct: 596 VVKGP-PSPPDMVVVEEVTDSTAQLSWSP--GQDNGSPITGYAIQGRTPFTVGWQAVD-- 650

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG---PPSEIISF--VTPEGVP 504
            ++ E+I   G + T  V       +   RVLA N    G   PPS  I      P+  P
Sbjct: 651 -TVPEVI--NGNTLTATVVGLNAWVEYEFRVLASNSVGMGEPSPPSTKIRTEDSMPDAAP 707

Query: 505 GTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
             V          S   + W  V  E  NG   GY I ++      VG +      IS P
Sbjct: 708 TDVGGGGGT---KSELVITWEPVPEELQNGEGFGYIIAFR-----PVGMVTWTRVVISAP 759

Query: 563 TTTSAKLAG--LEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEGRGSTP 615
           + T        + P + + + +  +   G+G  S          VP   P+ V  +  + 
Sbjct: 760 SLTRYVFRNDTIPPFSPFNVKVGAFNNRGEGPFSTIATVFSAEEVPSIAPEKVSAKSLSA 819

Query: 616 NNLVISWTAMPEIEHNAPHFKYRIFW 641
            ++ ++W  +  I      ++  ++W
Sbjct: 820 ADIEVTWEPIASIPERVLGYEV-VYW 844



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 157/629 (24%), Positives = 242/629 (38%), Gaps = 68/629 (10%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N + + + +S    ++           P   +  P+ I A
Sbjct: 183 NLYIAKVEPSDVGNYTCVVNNTITKERVFSSPTPLVLRNDGAMGEYEPKIELHFPDTIPA 242

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT-IENLRKSDTGNYG 196
           A+   +  EC A G P P I W         + PN  +    N I  I + ++ DTG Y 
Sbjct: 243 AKGSALKLECFALGNPVPRISWRRTSD---VSFPNKVKLKNSNAILEIPSFQQEDTGTYE 299

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       V+  A  P   +   D      + +   C+  G PKP  +W+ N 
Sbjct: 300 CIAENSRGKNAARGRVSFHA-TPHWLQTMTDTAMSIEENLFWECKANGKPKPSYSWLKNG 358

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ--- 313
           + L       +E G L I  +  +D G Y C A NK G    S  L V        Q   
Sbjct: 359 ESLISEGRVQIENGALSIFSLNLSDGGMYQCVAENKHGIIYSSAELMVLASAPSFSQNPL 418

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +  +  +G   +  C   + P  +   +W RG+E +   +E  F+  N  +L +T  ++
Sbjct: 419 SQTLKARSGSDVSLDCRPHASP--RAISLWKRGTEILQ-RNERTFLFPNG-TLKITNITK 474

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV----VSWNPVSPQ 429
            D G YTC A+ +         L +  P     + +  ++   +  V    V+ +P    
Sbjct: 475 RDGGSYTCVAKNQFGTASTTGKLIITEPTRISQSPSSTEITVGESVVLPCQVTADPALDV 534

Query: 430 SLRGHFRGYKVQTWTEKD----------GEGSIRELIVNKGESTTTEVDKFVPASKNFAR 479
           +    F G  +    + D          G+  IR + +N G      VD  V +    A 
Sbjct: 535 AFSWAFNGQPIDFHQDADHFERVGGSFSGDLMIRNIQLNHGGKYVCLVDTDVESLSADAI 594

Query: 480 VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV-LMGYK 538
           ++       GPPS     V  E    T Q             L W  P Q NG  + GY 
Sbjct: 595 LVV-----KGPPSPPDMVVVEEVTDSTAQ-------------LSW-SPGQDNGSPITGYA 635

Query: 539 IKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES--- 594
           I  Q      VG   ++ +P + +  T +A + GL    +Y   +      G G  S   
Sbjct: 636 I--QGRTPFTVGWQAVDTVPEVINGNTLTATVVGLNAWVEYEFRVLASNSVGMGEPSPPS 693

Query: 595 ---KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWN 651
              +    +P   P +V G G T + LVI+W  +PE   N   F Y I +R       W 
Sbjct: 694 TKIRTEDSMPDAAPTDVGGGGGTKSELVITWEPVPEELQNGEGFGYIIAFRPVGM-VTWT 752

Query: 652 QDDVLDWRQSELVLANQ--PTFQPYEIKV 678
           +  +     +  V  N   P F P+ +KV
Sbjct: 753 RVVISAPSLTRYVFRNDTIPPFSPFNVKV 781



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 151/642 (23%), Positives = 246/642 (38%), Gaps = 75/642 (11%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +    R+   N   +L I  +  SD G Y C   N  G   
Sbjct: 342 CKANGKPKPSYSWLKNGESLISEGRVQIEN--GALSIFSLNLSDGGMYQCVAENKHGIIY 399

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           S S +L VLA AP F+  P  + + A     V+ +C+    P     W   G  I Q   
Sbjct: 400 S-SAELMVLASAPSFSQNPLSQTLKARSGSDVSLDCRPHASPRAISLW-KRGTEILQR-- 455

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
           N R  + PN  + I N+ K D G+Y C A N  G       + ++     I+++P     
Sbjct: 456 NERTFLFPNGTLKITNITKRDGGSYTCVAKNQFGTASTTGKL-IITEPTRISQSPSSTEI 514

Query: 231 VDGKTVVLTCRVFGAPKPEV--NWIHNQK-----------ELTGGRYTILETGDLKITDV 277
             G++VVL C+V   P  +V  +W  N +           E  GG ++    GDL I ++
Sbjct: 515 TVGESVVLPCQVTADPALDVAFSWAFNGQPIDFHQDADHFERVGGSFS----GDLMIRNI 570

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
                G+Y C     + +      L VK      D     EV    +A    +   D   
Sbjct: 571 QLNHGGKYVCLVDTDVESLSADAILVVKGPPSPPDMVVVEEV-TDSTAQLSWSPGQDNGS 629

Query: 338 KLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
            ++   ++G  P        ++ P  +  N  + TV   +     ++   A   +   E 
Sbjct: 630 PITGYAIQGRTPFTVGWQAVDTVPEVINGNTLTATVVGLNAWVEYEFRVLASNSVGMGEP 689

Query: 393 QATLTV-----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ------ 441
               T       +P  AP++        ++  V++W PV  +   G   GY +       
Sbjct: 690 SPPSTKIRTEDSMPDAAPTDVGGGGGTKSE-LVITWEPVPEELQNGEGFGYIIAFRPVGM 748

Query: 442 -TWTEKDGEGSIRELIVNKGESTTTEV---DKFVPASKNFARVLAFNGAYNGPPSEIISF 497
            TWT           +V    S T  V   D   P S    +V AFN    GP S I + 
Sbjct: 749 VTWTR----------VVISAPSLTRYVFRNDTIPPFSPFNVKVGAFNNRGEGPFSTIATV 798

Query: 498 VTPEGVPGTV-QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKVGPLLE 554
            + E VP    + + A  L ++   + W         ++GY++ Y     K   VG +  
Sbjct: 799 FSAEEVPSIAPEKVSAKSLSAADIEVTWEPIASIPERVLGYEVVYWEDDTKPDTVGKVRI 858

Query: 555 RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL-----FYVPFKNPDNVE 609
              Y      T+  ++GL+ +T+Y + +  +  AG G +S  +        P + P NVE
Sbjct: 859 TGNY------TAVNVSGLQGNTQYYLAVCAFNTAGTGPQSAPVNITTKKPPPGQPPQNVE 912

Query: 610 GRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWN 651
                 + L++ W  +  +E  +    Y + +RRH   + ++
Sbjct: 913 WN-LIGSQLILQWDPVIALETESEVTGYIVLYRRHRNNDMYS 953



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 145/389 (37%), Gaps = 34/389 (8%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVSNGVG 111
           L C   G P PQ  WS +G  I+      +   G +LII  ++   D G Y C   N  G
Sbjct: 51  LSCEASGAPSPQYRWSLNGTLIDLGGDERRRLSGGNLIITGLDRDQDSGVYQCTAFNTRG 110

Query: 112 EAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLP----EPEIHWVHNGKP- 165
              S    L       F  +    +N  E + V   C   G P    E    WV N  P 
Sbjct: 111 TILSQRATLQFAYLENFKTQTRSAVNVREGQGVVLLC---GTPLHSGELTFTWVFNEYPH 167

Query: 166 -ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLG--YVYKDVYVNVLAHAPE 220
            + Q   + RR V      + I  +  SD GNY C   N++    V+      VL +   
Sbjct: 168 FVQQ---DSRRFVSQETGNLYIAKVEPSDVGNYTCVVNNTITKERVFSSPTPLVLRNDGA 224

Query: 221 ITE-APKDEY-------TVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD- 271
           + E  PK E           G  + L C   G P P ++W     +++      L+  + 
Sbjct: 225 MGEYEPKIELHFPDTIPAAKGSALKLECFALGNPVPRISW-RRTSDVSFPNKVKLKNSNA 283

Query: 272 -LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN 330
            L+I      D+G Y C A N  G     G ++     H      D  +   ++  + C 
Sbjct: 284 ILEIPSFQQEDTGTYECIAENSRGKNAARGRVSFHATPHWLQTMTDTAMSIEENLFWECK 343

Query: 331 AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
           A   P  K S  WL+  E +  E     VQ  + +L++   +  D G Y C A+ +   I
Sbjct: 344 ANGKP--KPSYSWLKNGESLISEGR---VQIENGALSIFSLNLSDGGMYQCVAENKHGII 398

Query: 391 EAQATLTVQVPLEAPSNFTLIQVIDAKKA 419
            + A L V     + S   L Q + A+  
Sbjct: 399 YSSAELMVLASAPSFSQNPLSQTLKARSG 427



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 114/286 (39%), Gaps = 32/286 (11%)

Query: 123 LAAPYFTVEPEF----INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
            + P +  EPE     I + ++E V   C+ASG P P+  W  NG  I       RR  G
Sbjct: 26  FSGPSWKREPEDLILPIYSPQQEAV-LSCEASGAPSPQYRWSLNGTLIDLGGDERRRLSG 84

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N I     R  D+G Y C A N+ G +         A+        +    V +G+ VV
Sbjct: 85  GNLIITGLDRDQDSGVYQCTAFNTRGTILSQRATLQFAYLENFKTQTRSAVNVREGQGVV 144

Query: 238 LTCRVFGAP----KPEVNWIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCFA 289
           L C   G P    +    W+ N+     +    R+   ETG+L I  V  +D G YTC  
Sbjct: 145 LLC---GTPLHSGELTFTWVFNEYPHFVQQDSRRFVSQETGNLYIAKVEPSDVGNYTCVV 201

Query: 290 RNKLG-----------TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            N +              +  G++   E       P+      G +    C A+ +P  +
Sbjct: 202 NNTITKERVFSSPTPLVLRNDGAMGEYEPKIELHFPDTIPAAKGSALKLECFALGNPVPR 261

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           +S  W R S+ + F ++ +   SN   L +    + D+G Y C A+
Sbjct: 262 IS--WRRTSD-VSFPNKVKLKNSNAI-LEIPSFQQEDTGTYECIAE 303


>gi|393905222|gb|EJD73902.1| immunoglobulin I-set domain-containing protein [Loa loa]
          Length = 1181

 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 210/457 (45%), Gaps = 35/457 (7%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALR-NKKVELFCIFGGTPLPQ 64
           R EY+ GN   L V     SA ++      +     +EV+++   K++L CIFGG PLP 
Sbjct: 213 RGEYRAGNEFQLIVD----SAKKSNGTVIHKLWFSPEEVSVKVGTKLKLMCIFGGRPLPN 268

Query: 65  TIWSKDGVPINPSDRI-----SQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSID 119
             WSK    + P  R+      + ++GK+LII++V   D G Y C       +   + + 
Sbjct: 269 ITWSKLNGEL-PFTRLKDFKSQEADFGKALIIENVRAEDAGIYECR-----SQHLFHQMH 322

Query: 120 LSVLAAPYFTVEP-EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           ++  AAP++  +P + I+  E       C  SG+P P + W  NG P+ +   N RR + 
Sbjct: 323 VTTAAAPFWIDKPPQDIDEPEGNAGEIHCVTSGIPTPIVQWFINGVPLHELADNDRRMIL 382

Query: 179 PNR--ITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK- 234
            N   + I NL    DT  Y CNA+N  GYV+ + +VNV A+AP         + V  K 
Sbjct: 383 NNGQILRIVNLDHDIDTAVYQCNASNPFGYVFGNAFVNVRAYAPYFKMPSHRVWNVVRKS 442

Query: 235 TVVLTCRVFGAPKPEVNWIHNQKE---LTGGRYTILETGDLKITDVAFADSGEYTCFARN 291
           TV ++C V  AP+  V W+        +  G+  I     L+++ V  AD G Y C   N
Sbjct: 443 TVEMSCDVDAAPEAVVKWVDANDHPLAVVLGKIHIFRNHTLRLSQVNSADEGLYYCNVSN 502

Query: 292 KLGTAQGSGSLTVKEHTHITD--QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEP 349
           K G  +    L V   TH      P+   +EA +S  + C AV DP L +   W R   P
Sbjct: 503 KYGINRAVNRLQVFSPTHFIRVPSPKKLILEAHESVEYICEAVCDPRLTIEYSWTRNGIP 562

Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFT 409
           I+   +    +S + SL +  +  + SG   C A T +D   +   LTV   L+ P    
Sbjct: 563 IN---DSVHFKSLNNSLLIVDARGIHSGVIDCIALTNVDVKISGVELTV---LDVPDAPI 616

Query: 410 LIQV-IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE 445
           +  +  + ++A++SW    P       + + VQ  TE
Sbjct: 617 VTGINCNERRAMLSWR--RPVDHGDQIKQFLVQMHTE 651



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 155/682 (22%), Positives = 281/682 (41%), Gaps = 75/682 (10%)

Query: 31   HAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGK--- 87
            +AP  +  + +    +R   VE+ C     P     W      ++ +D       GK   
Sbjct: 424  YAPYFKMPSHRVWNVVRKSTVEMSCDVDAAPEAVVKW------VDANDHPLAVVLGKIHI 477

Query: 88   ----SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV--EPEFINAAEEE 141
                +L +  V  +D+G Y C VSN  G  ++ +  L V +  +F     P+ +     E
Sbjct: 478  FRNHTLRLSQVNSADEGLYYCNVSNKYGINRAVN-RLQVFSPTHFIRVPSPKKLILEAHE 536

Query: 142  TVTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA 199
            +V + C+A   P   I   W  NG PI+ +      K   N + I + R   +G   C A
Sbjct: 537  SVEYICEAVCDPRLTIEYSWTRNGIPINDSV---HFKSLNNSLLIVDARGIHSGVIDCIA 593

Query: 200  TNSLGYVYKDVYVNVL--AHAPEITEAPKDEYTVDGKTVVLTCR--VFGAPKPEVNWIHN 255
              ++      V + VL    AP +T    +E     +  +L+ R  V    + +   +  
Sbjct: 594  LTNVDVKISGVELTVLDVPDAPIVTGINCNE-----RRAMLSWRRPVDHGDQIKQFLVQM 648

Query: 256  QKELTGGRY-TILE----TGDLKITDVAFADSGEYT--CFARNKLGTAQ---GSGSLTVK 305
              E   G + T++E      D    D+A +    YT    ARN  G ++     G +   
Sbjct: 649  HTEFEEGLWQTVVEKENTAADFYQVDIALSPWVNYTFRVIARNSRGESEPGFKEGIVCST 708

Query: 306  EHTHITDQPEDYEVEAGQSATFRCN-------AVSDPSLKLSIVWLRGSEPIDFESEPRF 358
            +  +    P+D   E  + +              + P L+  IV  R +EP +  +E R 
Sbjct: 709  KAYYPFTNPKDVRAEGSEPSNIIIEWKPMNKYDWNGPGLQY-IVRYRLNEPGETWTEIR- 766

Query: 359  VQSNDYSLTVTKSSELDSGQYTCRAQTELDF---IEAQATLT----VQVPLEAPSNFTLI 411
            ++    + TV +  +    +Y  + ++   F   I   A++        PL +P +F++ 
Sbjct: 767  IEDPLANHTVVRE-QPTFREYLVQVESLNSFGPAIVKPASVKGYSGEDTPLLSPVDFSVS 825

Query: 412  QVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFV 471
            + I+    ++ W  V   ++RGHF+GY ++ W E +   +I  +   K E+ T  +    
Sbjct: 826  KFINCTAVLLMWKHVDRDTVRGHFKGYLIEYW-ENEKPFAIMNVGAEKHENETI-LYGLN 883

Query: 472  PASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPN 531
            P +   AR+   N  Y       + F TPEG+P  V ++    +G+ + Y+ W  P QPN
Sbjct: 884  PITNYTARIRTANSRYLSESPSTVKFATPEGIPSKVHNMRVRAVGARSLYVTWEPPRQPN 943

Query: 532  GVLMGYKIKYQ-SVKGTK--VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
            G + GY I ++ S  GTK     L  +L Y+++           EP T Y++ +   TK 
Sbjct: 944  GYVRGYFITFENSSTGTKEETFVLNRQLYYLNEEG---------EPDTGYKVSVWAETKG 994

Query: 589  GDGAE-SKYLFYVPFKNPD--NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
            G+G +  + +   P + PD  N      +P    + W      E   P   + + +   N
Sbjct: 995  GEGPKVVRPVRTWPLREPDIPNFTVEAISPTMARVQWLLSNGSEWAMPGSTFLVNYSIAN 1054

Query: 646  TGEAWNQDDVLDWRQSELVLAN 667
            + + W + + +   Q+E++L++
Sbjct: 1055 SND-WIESEQISLPQTEILLSD 1075



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 45/80 (56%)

Query: 599 YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDW 658
           Y PF NP +V   GS P+N++I W  M + + N P  +Y + +R +  GE W +  + D 
Sbjct: 711 YYPFTNPKDVRAEGSEPSNIIIEWKPMNKYDWNGPGLQYIVRYRLNEPGETWTEIRIEDP 770

Query: 659 RQSELVLANQPTFQPYEIKV 678
             +  V+  QPTF+ Y ++V
Sbjct: 771 LANHTVVREQPTFREYLVQV 790



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 107/286 (37%), Gaps = 70/286 (24%)

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT-----------IENLRKSDTGNY 195
           C A+G PE    W  NGK         R +V  NRI            I + +  D G Y
Sbjct: 52  CYATGNPE-TYEWFKNGK---------RLEVDNNRIVWEKQFQSGTIIINDAQDGDQGYY 101

Query: 196 GCNATNSLGYVYKD---VYVNVLAH-APE-ITEAPKDEYTVDGKTVVLTCRV-FGAPKPE 249
            C+A+N  G    +   V + VL H AP  +     DE    G ++ + C + FG PKP 
Sbjct: 102 QCHASNIFGTAVSNKFHVQIGVLDHFAPRGVRRLIVDE----GGSLSIRCDIPFGVPKPS 157

Query: 250 VNWIHNQKELTGGRYTILET-------GDLKITDVAFADSGE---YTCFARNK------- 292
           V W++   + T    TI          G L  T V   D  +   Y C A +        
Sbjct: 158 VFWLYRDAQRTNVMETIRRKHIAVDTEGTLHFTAVEKHDGRQNLIYQCAATSPVLRGEYR 217

Query: 293 --------LGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWL 344
                   + +A+ S    + +   +   PE+  V+ G      C     P   ++   L
Sbjct: 218 AGNEFQLIVDSAKKSNGTVIHK---LWFSPEEVSVKVGTKLKLMCIFGGRPLPNITWSKL 274

Query: 345 RGSEPI----DFESEPRFVQSNDY--SLTVTKSSELDSGQYTCRAQ 384
            G  P     DF+S     Q  D+  +L +      D+G Y CR+Q
Sbjct: 275 NGELPFTRLKDFKS-----QEADFGKALIIENVRAEDAGIYECRSQ 315


>gi|157909805|ref|NP_766592.2| contactin-4 isoform 2 precursor [Mus musculus]
 gi|157909814|ref|NP_001103221.1| contactin-4 isoform 2 precursor [Mus musculus]
          Length = 705

 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 184/394 (46%), Gaps = 24/394 (6%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+P  +W + DG PI    R  + N    L I + +  D GSY 
Sbjct: 237 AEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGSYE 294

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P +      I+ A EE+V +ECKA+G P+P   W+ NG
Sbjct: 295 CVAENSRGKNVAKG-QLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNG 353

Query: 164 KPISQAPPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
            P+       R ++    G   ITI NL  SD G Y C A N  G ++    ++V+A +P
Sbjct: 354 DPLLT-----RDRIQIEQGTLNITIVNL--SDAGMYQCVAENKHGVIFSSAELSVIAESP 406

Query: 220 EITEAPKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITD 276
           + +       T+   G  VV+ C+   +P+P   W   ++ L    R TI E G+L+I +
Sbjct: 407 DFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIIN 466

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
           V  +D+G YTC A N  GTA  +G++ VK+ T +   P   +V  G+S    C    D S
Sbjct: 467 VTKSDAGSYTCIATNHFGTASSTGNVIVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHS 526

Query: 337 LKLSIVWLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           L +   W      IDF+ +         Q +   L +       +G+Y C  QT +D + 
Sbjct: 527 LDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLS 586

Query: 392 AQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
             A L V+ P   P   T+ ++ D   A +SW P
Sbjct: 587 VAADLIVRGPPGPPEAVTIDEITDT-TAQLSWRP 619



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 139/333 (41%), Gaps = 32/333 (9%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V+ PE + A
Sbjct: 178 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPA 237

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
            +  TV  EC A G P P I W   +GKPI++     RR      + I N ++ D G+Y 
Sbjct: 238 EKGTTVKLECFALGNPVPTILWRRADGKPIAR---KARRHKSNGILEIPNFQQEDAGSYE 294

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P   +   D +    ++V   C+  G PKP   W+ N 
Sbjct: 295 CVAENSRGKNVAKGQLTFYAQ-PNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNG 353

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
             L       +E G L IT V  +D+G Y C A NK G    S  L+V     I + P+ 
Sbjct: 354 DPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSV-----IAESPDF 408

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  +    W +G E I  E+E R   S D +L +
Sbjct: 409 SRTLLKRVTLVKVGGEVVIECKPKASP--RPVYTWRKGRE-ILRENE-RITISEDGNLRI 464

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
              ++ D+G YTC A        +   + V+ P
Sbjct: 465 INVTKSDAGSYTCIATNHFGTASSTGNVIVKDP 497



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 141/369 (38%), Gaps = 30/369 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  ++            SL+I +  +  D G+Y C  +
Sbjct: 44  KKVKLSCEVKGNPKPHIRWKINGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQCIAT 103

Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVHN 162
           N  G   S    L       F T     ++    + +   C   G P    E    W+ N
Sbjct: 104 NSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLC---GPPPHSGELSYAWIFN 160

Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN- 213
             P  Q   + RR V      + I  + KSD GNY C  TN+      LG     +  N 
Sbjct: 161 EYPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRND 217

Query: 214 --VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILET 269
             +  + P+I  + P+      G TV L C   G P P + W   + K +          
Sbjct: 218 GVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSN 277

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I +    D+G Y C A N  G     G LT     +      D  V   +S  + C
Sbjct: 278 GILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWEC 337

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   P  K +  WL+  +P+        +Q    +L +T  +  D+G Y C A+ +   
Sbjct: 338 KANGRP--KPTYRWLKNGDPLLTRDR---IQIEQGTLNITIVNLSDAGMYQCVAENKHGV 392

Query: 390 IEAQATLTV 398
           I + A L+V
Sbjct: 393 IFSSAELSV 401



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 117/303 (38%), Gaps = 34/303 (11%)

Query: 119 DLSVLAAPYFTVEPEFIN---AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D   L  P F  EP  +     +EE+ V   C+  G P+P I W  NG  +     + R 
Sbjct: 19  DDYTLHGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKINGTDVDIG-MDFRY 77

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            V    + I N  K+ D G Y C ATNS G +         A+        +   +V  G
Sbjct: 78  SVVDGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRG 137

Query: 234 KTVVLTCRVFGAPKPEVN-----WIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYT 286
           + +VL C     P P        WI N+        R+   ETG+L I  V  +D G YT
Sbjct: 138 QGMVLLC----GPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYT 193

Query: 287 CFARNK------LG-----TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           C   N       LG       +  G +   E       PE    E G +    C A+ +P
Sbjct: 194 CVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNP 253

Query: 336 SLKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
               +I+W R   +PI    + R  +SN   L +    + D+G Y C A+       A+ 
Sbjct: 254 V--PTILWRRADGKPI--ARKARRHKSNGI-LEIPNFQQEDAGSYECVAENSRGKNVAKG 308

Query: 395 TLT 397
            LT
Sbjct: 309 QLT 311


>gi|170589239|ref|XP_001899381.1| Immunoglobulin I-set domain containing protein [Brugia malayi]
 gi|158593594|gb|EDP32189.1| Immunoglobulin I-set domain containing protein [Brugia malayi]
          Length = 1171

 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 136/455 (29%), Positives = 205/455 (45%), Gaps = 31/455 (6%)

Query: 6   RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
           R EY+ GN   L V     +   N  A  + + + +K       K++L CIFGG PLP  
Sbjct: 213 RGEYRAGNEFQLIV---NPAKKNNGTAIHKLWFSPEKVSVKVGTKLKLMCIFGGRPLPNI 269

Query: 66  IWSK--DGVPI-NPSDRISQ-GNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLS 121
            WSK  D +P+    D  SQ  +YGK+LII++V   D G Y C       +   + + ++
Sbjct: 270 TWSKLNDDLPLARLKDFKSQEADYGKALIIENVRSEDAGIYECR-----SQHLFHQMHVT 324

Query: 122 VLAAPYFTVEP-EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV--G 178
             AAP++  +P E I+  E  +    C  SG+P P I W  NG P+ +   N RR +   
Sbjct: 325 TNAAPFWIDKPPEDIDEPEGSSAEIHCTISGIPTPIIQWFINGVPLHELADNDRRMILNS 384

Query: 179 PNRITIENL-RKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TV 236
              + I NL    DT  Y CNA+N  GYV+ + +VNV A+AP         + V  K TV
Sbjct: 385 GQILRIVNLDHDVDTAVYQCNASNPFGYVFGNAFVNVRAYAPYFKMPSHRIWNVVRKSTV 444

Query: 237 VLTCRVFGAPKPEVNWIHNQKE---LTGGRYTILETGDLKITDVAFADSGEYTCFARNKL 293
            ++C V  APK  V W+        +   +  I     L+I+ V  AD G Y C   NK 
Sbjct: 445 EMSCDVEAAPKAVVKWVDTNDHSIAVVLEKINIFPNHTLRISQVNSADEGLYYCNVSNKY 504

Query: 294 GTAQGSGSLTVKEHTHITD--QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID 351
           G  +    L V   TH      P+   +EA +S  + C AV DP L +   W     PI+
Sbjct: 505 GINRAVNQLQVFNPTHFIRVPSPKKSILEAHESVEYVCEAVCDPRLTIEYSWTHNGIPIN 564

Query: 352 FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLI 411
                + + +   SL +  +    SG   C   T++D   +   LTV   L+ P+   + 
Sbjct: 565 DSVHFKLLNN---SLLIVNARGFHSGTIDCIVLTDVDVKISGIELTV---LDVPAAPIIT 618

Query: 412 QV-IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE 445
            +  + ++A++ W    P       + + +Q  TE
Sbjct: 619 GINCNERRAMLRWR--RPDDHGDQIKQFLIQMHTE 651



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 17/228 (7%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            PL +P +F++ + I+    ++ W  V   S+RGHF+GY +  W E +   +I      K 
Sbjct: 815  PLLSPIDFSVSEFINCTAVLLIWKHVDRDSVRGHFKGYLIDYW-ENEKPFAIMNAGAEKH 873

Query: 461  ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
            ++ T   D   P +   AR+   N  Y      II F TPEG+P  V ++    +G+ + 
Sbjct: 874  KNETILYD-LKPMTNYTARIRTANSRYLSESPSIIKFTTPEGIPSKVHNMRVRAVGARSL 932

Query: 521  YLKWVKPEQPNGVLMGYKIKYQ-SVKGTK--VGPLLERLPYISDPTTTSAKLAGLEPSTK 577
            Y+ W  P QPNG + GY I ++ S  G K     L  +L Y+++           EP T 
Sbjct: 933  YVTWEPPRQPNGYVRGYFITFENSSTGVKEETFVLNRQLYYLNEEG---------EPDTG 983

Query: 578  YRIHLAGYTKAGDGAE-SKYLFYVPFKNPD--NVEGRGSTPNNLVISW 622
            YR+ +   TK G+G +  + +   P + PD  N      +P    + W
Sbjct: 984  YRVSVWAETKGGEGPKVVRPVRTWPLREPDVPNFTVEAISPTTARVQW 1031



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%)

Query: 599 YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDW 658
           Y PF NP +V   GS PNN++I W  M + + N P  +Y + ++ +  GEAW +  + D 
Sbjct: 711 YYPFTNPKDVRAEGSEPNNMIIEWKPMDKYDWNGPGLQYIVRYKFNKPGEAWTEIRIEDP 770

Query: 659 RQSELVLANQPTFQPYEIKV 678
             +  V+  QPTF+ Y I+V
Sbjct: 771 LANYTVIREQPTFREYLIQV 790



 Score = 44.3 bits (103), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 101/273 (36%), Gaps = 44/273 (16%)

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNP--RRKVGPNRITIENLRKSDTGNYGCNATNSLG 204
           C A+G PE    W  +G+ +          ++     I I + R  D G Y C+A+N  G
Sbjct: 52  CYATGNPE-TYEWFKDGEKLKVDGDRIAWEKQFQSGTIIINDARDGDQGYYQCHASNIFG 110

Query: 205 YVYKD---VYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRV-FGAPKPEVNWIHNQKELT 260
               +   V + VL H   +    +     +G+++ + C + +G PKP V W++   + T
Sbjct: 111 IAVSNKFHVQIGVLDHF--VPRGVRRLIVDEGQSLSIRCDIPYGVPKPSVFWLYRDTQRT 168

Query: 261 GGRYTI------LET-GDLKITDVAFADS----------------GEYTCFARNKLGTAQ 297
               TI      ++T G L  T V   D                 GEY      +L    
Sbjct: 169 NMIETIRYKHIAVDTEGTLHFTAVKKHDGRQNLIYQCAVTSPVLRGEYRAGNEFQLIVNP 228

Query: 298 GSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPI----DFE 353
              +     H  +   PE   V+ G      C     P   ++   L    P+    DF+
Sbjct: 229 AKKNNGTAIHK-LWFSPEKVSVKVGTKLKLMCIFGGRPLPNITWSKLNDDLPLARLKDFK 287

Query: 354 SEPRFVQSNDY--SLTVTKSSELDSGQYTCRAQ 384
           S     Q  DY  +L +      D+G Y CR+Q
Sbjct: 288 S-----QEADYGKALIIENVRSEDAGIYECRSQ 315


>gi|109035936|ref|XP_001101588.1| PREDICTED: contactin-6 isoform 1 [Macaca mulatta]
          Length = 1024

 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 188/727 (25%), Positives = 309/727 (42%), Gaps = 100/727 (13%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    + S+      L I + +  D+G Y 
Sbjct: 234 AAKDSSVKLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQ--AILEIPNFQQEDEGFYE 291

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C  SN  G   +    L   A P +  + +    +  + + ++CKASG P P   W+ NG
Sbjct: 292 CIASNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDNLLWKCKASGKPNPWYTWLKNG 350

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++   P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 351 ERLN---PEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSK 407

Query: 224 AP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
           +P  K+ +   G  +V+ C+    P+  ++W    + L    R  +LE G LKI +V  +
Sbjct: 408 SPVKKNSFVQVGGDIVIECKPNAFPRAAISWKRGTETLRQSKRMFLLEDGSLKIYNVTRS 467

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ GTA+ +GSL VKE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 468 DAGSYTCIATNQFGTAKNAGSLIVKERTVITVPPSKMDVTVGESIVLPCQVSHDPSIEVV 527

Query: 341 IVWLRGSEPIDF-ESEPRFVQSNDYSL--TVTKSSELD-SGQYTCRAQTELDFIEAQATL 396
            VW    + ID  +    F +    S+   + ++ +L+ SG+Y C  QT L+ + A A +
Sbjct: 528 FVWFFNGDIIDLKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADI 587

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW    P +     + + +QT T          ++
Sbjct: 588 IVRGPPGPPEDVK-VEEISSTTSQLSWR-AGPDN-NSPIQIFTIQTQTPFSVGWQAVATV 644

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLE 511
            E++   G++    V    P  +   RV+A N    G PS+    + T   VP       
Sbjct: 645 PEIL--NGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVNV 702

Query: 512 AIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
               GS S   + W  +  E  NG   GY I ++ V  T               T T  K
Sbjct: 703 NGGGGSRSELVITWESIPEELQNGEGFGYIIMFRPVGST---------------TWTKEK 747

Query: 569 LAGLE------------PSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS--- 613
           +A +E            P + + + +  Y   G+G+ S        ++   +  RG+   
Sbjct: 748 VASVESSRFVYRNESIIPLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQ 807

Query: 614 --TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
             + + + +SW A+                       AWN       R +  VL      
Sbjct: 808 SFSASEMEVSWNAI-----------------------AWN-------RNTGRVLG----- 832

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
             YE   V  WT+   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S
Sbjct: 833 --YE---VLYWTDDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGTGPSS 886

Query: 732 EIISFVT 738
             ++  T
Sbjct: 887 PPVNVTT 893



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 165/660 (25%), Positives = 259/660 (39%), Gaps = 87/660 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC ++N   EA+      SV   P   V+                
Sbjct: 175 NLYIAKVEPSDVGNYTCFITNK--EAQR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 227

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ +V  EC A G P P+I W   +G P+   P   +       + I N ++
Sbjct: 228 FPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPL---PGKVKYSKSQAILEIPNFQQ 284

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A+N  G       + +    PE  +  ++ Y      ++  C+  G P P 
Sbjct: 285 EDEGFYECIASNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDNLLWKCKASGKPNPW 343

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L       +E G L IT +  +DSG Y C A NK      +  L V     
Sbjct: 344 YTWLKNGERLNPEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAP 403

Query: 309 HITDQP--EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P  ++  V+ G      C   + P  + +I W RG+E +      R     D SL
Sbjct: 404 DFSKSPVKKNSFVQVGGDIVIECKPNAFP--RAAISWKRGTETL--RQSKRMFLLEDGSL 459

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV------ 420
            +   +  D+G YTC A  +    +   +L V+         T+I V  +K  V      
Sbjct: 460 KIYNVTRSDAGSYTCIATNQFGTAKNAGSLIVK-------ERTVITVPPSKMDVTVGESI 512

Query: 421 -----VSWNPVSPQSLRGHFRG-----YKVQTWTEKDGEGSIRELIVNKGESTTTEVDKF 470
                VS +P         F G      K     E+ G  S+ +L++   +       K+
Sbjct: 513 VLPCQVSHDPSIEVVFVWFFNGDIIDLKKGMAHFERIGGESVGDLMIRNIQ--LNHSGKY 570

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
           +   +     L+            ++ +   G PG  + ++   + S+   L W      
Sbjct: 571 LCTVQTTLESLS-----------AVADIIVRGPPGPPEDVKVEEISSTTSQLSWRAGPDN 619

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           N  +  + I+ Q+     VG   +  +P I +  T +A + GL P  +Y   +      G
Sbjct: 620 NSPIQIFTIQTQT--PFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIG 677

Query: 590 DGAESK------YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  SK          VP   P NV G G + + LVI+W ++PE   N   F Y I +R 
Sbjct: 678 IGEPSKPSELLRTKASVPAVAPVNVNGGGGSRSELVITWESIPEELQNGEGFGYIIMFRP 737

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
             +   W ++ V     S  V  N+      P+E+KV       +GEGS+  + IV  GE
Sbjct: 738 VGS-TTWTKEKVASVESSRFVYRNESIIPLSPFEVKV--GVYNNEGEGSLSTVTIVYSGE 794



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 154/640 (24%), Positives = 246/640 (38%), Gaps = 83/640 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +NP +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 334 CKASGKPNPWYTWLKNGERLNPEERIQIEN--GTLIITMLNVSDSGVYQCAAENKY-QII 390

Query: 115 SYSIDLSVLA-APYFTVEP----EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
             + +L VLA AP F+  P     F+    +  +  ECK +  P   I W    + + Q+
Sbjct: 391 YANAELRVLASAPDFSKSPVKKNSFVQVGGD--IVIECKPNAFPRAAISWKRGTETLRQS 448

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
                 + G   + I N+ +SD G+Y C ATN  G   K+    ++     IT  P    
Sbjct: 449 KRMFLLEDG--SLKIYNVTRSDAGSYTCIATNQFGTA-KNAGSLIVKERTVITVPPSKMD 505

Query: 230 TVDGKTVVLTCRVFGAPKPEVN--WIHN-----------QKELTGGRYTILETGDLKITD 276
              G+++VL C+V   P  EV   W  N             E  GG       GDL I +
Sbjct: 506 VTVGESIVLPCQVSHDPSIEVVFVWFFNGDIIDLKKGMAHFERIGGE----SVGDLMIRN 561

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSD 334
           +    SG+Y C  +  L +      + V+        PED +VE   S T + +  A  D
Sbjct: 562 IQLNHSGKYLCTVQTTLESLSAVADIIVRGPP---GPPEDVKVEEISSTTSQLSWRAGPD 618

Query: 335 PSLKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            +  + I  ++   P         + P  +    Y+ TV   S     ++   A   +  
Sbjct: 619 NNSPIQIFTIQTQTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGI 678

Query: 390 IEAQA-----TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ--- 441
            E             VP  AP N          + V++W  +  +   G   GY +    
Sbjct: 679 GEPSKPSELLRTKASVPAVAPVNVNGGGG-SRSELVITWESIPEELQNGEGFGYIIMFRP 737

Query: 442 ----TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
               TWT++          V + ES        +P S    +V  +N    G  S +   
Sbjct: 738 VGSTTWTKEKVASVESSRFVYRNES-------IIPLSPFEVKVGVYNNEGEGSLSTVTIV 790

Query: 498 VTPEGVP-----GT-VQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKV 549
            + E  P     GT VQS  A  +  S   + W    +  G ++GY++ Y     K + +
Sbjct: 791 YSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDSKESMI 847

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKN 604
           G +      +S   TT   + GL+ +T Y   +  Y  AG G  S  +        P + 
Sbjct: 848 GKI-----RVSGNVTTK-NITGLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQP 901

Query: 605 PDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           P N+  +  T + L ++W  +  +E+ +    Y+I +R++
Sbjct: 902 PANIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQN 940



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 136/380 (35%), Gaps = 44/380 (11%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK--HVEFSDQGSYT 103
           L   +V L C   G P P   W ++G  I+ +        G SL I   H +  D G Y 
Sbjct: 36  LSKSEVILKCAANGYPSPHYRWKQNGTDIDFTMSYHYRLDGGSLAISSPHTD-QDIGMYQ 94

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPEI----- 157
           C  +N +G   S    L       F T     ++  E + V   C     P P       
Sbjct: 95  CLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCG----PPPHFGDLSY 150

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY---------- 205
            W  N  P+     N RR V      + I  +  SD GNY C  TN              
Sbjct: 151 AWTFNDNPLYVQEDN-RRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPPTPL 209

Query: 206 ------VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKE 258
                 V  +    +    PE  +A KD       +V L C   G P P+++W   +   
Sbjct: 210 VQRTDGVMGEYEPKIEVRFPETIQAAKD------SSVKLECFALGNPVPDISWRRLDGSP 263

Query: 259 LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYE 318
           L G          L+I +    D G Y C A N  G     G L          + ++  
Sbjct: 264 LPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPPEWEQKIQNTY 323

Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQ 378
           +    +  ++C A   P+   +  WL+  E ++ E     +Q  + +L +T  +  DSG 
Sbjct: 324 LSIYDNLLWKCKASGKPNPWYT--WLKNGERLNPEER---IQIENGTLIITMLNVSDSGV 378

Query: 379 YTCRAQTELDFIEAQATLTV 398
           Y C A+ +   I A A L V
Sbjct: 379 YQCAAENKYQIIYANAELRV 398



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 106/286 (37%), Gaps = 32/286 (11%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L+ P FT EP    F     +  V  +C A+G P P   W  NG  I        R  G
Sbjct: 17  LLSRPIFTQEPHDVIFPLDLSKSEVILKCAANGYPSPHYRWKQNGTDIDFTMSYHYRLDG 76

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            +          D G Y C ATN LG +         A+  +     +   +V +G+ VV
Sbjct: 77  GSLAISSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVV 136

Query: 238 LTCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        W  N   L       R+   ETG+L I  V  +D G YTCF
Sbjct: 137 LLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCF 192

Query: 289 ARNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSL 337
             NK    + QG  +  V+    +  +         PE  +     S    C A+ +P  
Sbjct: 193 ITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVP 252

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            +S   L GS       + ++ +S    L +    + D G Y C A
Sbjct: 253 DISWRRLDGSP---LPGKVKYSKSQAI-LEIPNFQQEDEGFYECIA 294



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 14/190 (7%)

Query: 409 TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
           T +Q   A +  VSWN ++     G   GY+V  WT+   E  I ++ V+ G  TT  + 
Sbjct: 804 TSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVS-GNVTTKNIT 862

Query: 469 KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VK 526
                +  FA V A+N A  GP S  ++  T +  P    +  A  L +S   L W  VK
Sbjct: 863 GLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLTNSKLCLNWEHVK 922

Query: 527 PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGY 585
             +    ++GYKI Y+  + +K         +I +   TSA+L  L P    Y I +   
Sbjct: 923 TMENESEVLGYKILYRQNRQSKT--------HILETNNTSAEL--LVPFEEDYLIEIRTV 972

Query: 586 TKAGDGAESK 595
           +  GDG+ S+
Sbjct: 973 SDGGDGSSSE 982


>gi|297285390|ref|XP_002802773.1| PREDICTED: contactin-6 [Macaca mulatta]
          Length = 957

 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 188/727 (25%), Positives = 309/727 (42%), Gaps = 100/727 (13%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    + S+      L I + +  D+G Y 
Sbjct: 167 AAKDSSVKLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQ--AILEIPNFQQEDEGFYE 224

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C  SN  G   +    L   A P +  + +    +  + + ++CKASG P P   W+ NG
Sbjct: 225 CIASNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDNLLWKCKASGKPNPWYTWLKNG 283

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++   P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 284 ERLN---PEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSK 340

Query: 224 AP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
           +P  K+ +   G  +V+ C+    P+  ++W    + L    R  +LE G LKI +V  +
Sbjct: 341 SPVKKNSFVQVGGDIVIECKPNAFPRAAISWKRGTETLRQSKRMFLLEDGSLKIYNVTRS 400

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ GTA+ +GSL VKE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 401 DAGSYTCIATNQFGTAKNAGSLIVKERTVITVPPSKMDVTVGESIVLPCQVSHDPSIEVV 460

Query: 341 IVWLRGSEPIDF-ESEPRFVQSNDYSL--TVTKSSELD-SGQYTCRAQTELDFIEAQATL 396
            VW    + ID  +    F +    S+   + ++ +L+ SG+Y C  QT L+ + A A +
Sbjct: 461 FVWFFNGDIIDLKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADI 520

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW    P +     + + +QT T          ++
Sbjct: 521 IVRGPPGPPEDVK-VEEISSTTSQLSWR-AGPDN-NSPIQIFTIQTQTPFSVGWQAVATV 577

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLE 511
            E++   G++    V    P  +   RV+A N    G PS+    + T   VP       
Sbjct: 578 PEIL--NGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVNV 635

Query: 512 AIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
               GS S   + W  +  E  NG   GY I ++ V  T               T T  K
Sbjct: 636 NGGGGSRSELVITWESIPEELQNGEGFGYIIMFRPVGST---------------TWTKEK 680

Query: 569 LAGLE------------PSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS--- 613
           +A +E            P + + + +  Y   G+G+ S        ++   +  RG+   
Sbjct: 681 VASVESSRFVYRNESIIPLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQ 740

Query: 614 --TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
             + + + +SW A+                       AWN       R +  VL      
Sbjct: 741 SFSASEMEVSWNAI-----------------------AWN-------RNTGRVLG----- 765

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
             YE   V  WT+   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S
Sbjct: 766 --YE---VLYWTDDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGTGPSS 819

Query: 732 EIISFVT 738
             ++  T
Sbjct: 820 PPVNVTT 826



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 165/660 (25%), Positives = 259/660 (39%), Gaps = 87/660 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC ++N   EA+      SV   P   V+                
Sbjct: 108 NLYIAKVEPSDVGNYTCFITNK--EAQR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 160

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ +V  EC A G P P+I W   +G P+   P   +       + I N ++
Sbjct: 161 FPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPL---PGKVKYSKSQAILEIPNFQQ 217

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A+N  G       + +    PE  +  ++ Y      ++  C+  G P P 
Sbjct: 218 EDEGFYECIASNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDNLLWKCKASGKPNPW 276

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L       +E G L IT +  +DSG Y C A NK      +  L V     
Sbjct: 277 YTWLKNGERLNPEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAP 336

Query: 309 HITDQP--EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P  ++  V+ G      C   + P  + +I W RG+E +      R     D SL
Sbjct: 337 DFSKSPVKKNSFVQVGGDIVIECKPNAFP--RAAISWKRGTETL--RQSKRMFLLEDGSL 392

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV------ 420
            +   +  D+G YTC A  +    +   +L V+         T+I V  +K  V      
Sbjct: 393 KIYNVTRSDAGSYTCIATNQFGTAKNAGSLIVK-------ERTVITVPPSKMDVTVGESI 445

Query: 421 -----VSWNPVSPQSLRGHFRG-----YKVQTWTEKDGEGSIRELIVNKGESTTTEVDKF 470
                VS +P         F G      K     E+ G  S+ +L++   +       K+
Sbjct: 446 VLPCQVSHDPSIEVVFVWFFNGDIIDLKKGMAHFERIGGESVGDLMIRNIQ--LNHSGKY 503

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
           +   +     L+            ++ +   G PG  + ++   + S+   L W      
Sbjct: 504 LCTVQTTLESLS-----------AVADIIVRGPPGPPEDVKVEEISSTTSQLSWRAGPDN 552

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           N  +  + I+ Q+     VG   +  +P I +  T +A + GL P  +Y   +      G
Sbjct: 553 NSPIQIFTIQTQT--PFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIG 610

Query: 590 DGAESK------YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  SK          VP   P NV G G + + LVI+W ++PE   N   F Y I +R 
Sbjct: 611 IGEPSKPSELLRTKASVPAVAPVNVNGGGGSRSELVITWESIPEELQNGEGFGYIIMFRP 670

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
             +   W ++ V     S  V  N+      P+E+KV       +GEGS+  + IV  GE
Sbjct: 671 VGS-TTWTKEKVASVESSRFVYRNESIIPLSPFEVKV--GVYNNEGEGSLSTVTIVYSGE 727



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 154/640 (24%), Positives = 246/640 (38%), Gaps = 83/640 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +NP +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 267 CKASGKPNPWYTWLKNGERLNPEERIQIEN--GTLIITMLNVSDSGVYQCAAENKY-QII 323

Query: 115 SYSIDLSVLA-APYFTVEP----EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
             + +L VLA AP F+  P     F+    +  +  ECK +  P   I W    + + Q+
Sbjct: 324 YANAELRVLASAPDFSKSPVKKNSFVQVGGD--IVIECKPNAFPRAAISWKRGTETLRQS 381

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
                 + G   + I N+ +SD G+Y C ATN  G   K+    ++     IT  P    
Sbjct: 382 KRMFLLEDG--SLKIYNVTRSDAGSYTCIATNQFGTA-KNAGSLIVKERTVITVPPSKMD 438

Query: 230 TVDGKTVVLTCRVFGAPKPEVN--WIHN-----------QKELTGGRYTILETGDLKITD 276
              G+++VL C+V   P  EV   W  N             E  GG       GDL I +
Sbjct: 439 VTVGESIVLPCQVSHDPSIEVVFVWFFNGDIIDLKKGMAHFERIGGE----SVGDLMIRN 494

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSD 334
           +    SG+Y C  +  L +      + V+        PED +VE   S T + +  A  D
Sbjct: 495 IQLNHSGKYLCTVQTTLESLSAVADIIVRGPP---GPPEDVKVEEISSTTSQLSWRAGPD 551

Query: 335 PSLKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            +  + I  ++   P         + P  +    Y+ TV   S     ++   A   +  
Sbjct: 552 NNSPIQIFTIQTQTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGI 611

Query: 390 IEAQA-----TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ--- 441
            E             VP  AP N          + V++W  +  +   G   GY +    
Sbjct: 612 GEPSKPSELLRTKASVPAVAPVNVNGGGG-SRSELVITWESIPEELQNGEGFGYIIMFRP 670

Query: 442 ----TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
               TWT++          V + ES        +P S    +V  +N    G  S +   
Sbjct: 671 VGSTTWTKEKVASVESSRFVYRNES-------IIPLSPFEVKVGVYNNEGEGSLSTVTIV 723

Query: 498 VTPEGVP-----GT-VQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKV 549
            + E  P     GT VQS  A  +  S   + W    +  G ++GY++ Y     K + +
Sbjct: 724 YSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDSKESMI 780

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKN 604
           G +      +S   TT   + GL+ +T Y   +  Y  AG G  S  +        P + 
Sbjct: 781 GKI-----RVSGNVTTK-NITGLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQP 834

Query: 605 PDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           P N+  +  T + L ++W  +  +E+ +    Y+I +R++
Sbjct: 835 PANIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQN 873



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 14/190 (7%)

Query: 409 TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
           T +Q   A +  VSWN ++     G   GY+V  WT+   E  I ++ V+ G  TT  + 
Sbjct: 737 TSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVS-GNVTTKNIT 795

Query: 469 KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VK 526
                +  FA V A+N A  GP S  ++  T +  P    +  A  L +S   L W  VK
Sbjct: 796 GLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLTNSKLCLNWEHVK 855

Query: 527 PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGY 585
             +    ++GYKI Y+  + +K         +I +   TSA+L  L P    Y I +   
Sbjct: 856 TMENESEVLGYKILYRQNRQSKT--------HILETNNTSAEL--LVPFEEDYLIEIRTV 905

Query: 586 TKAGDGAESK 595
           +  GDG+ S+
Sbjct: 906 SDGGDGSSSE 915



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 81/214 (37%), Gaps = 29/214 (13%)

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPE 249
           D G Y C ATN LG +         A+  +     +   +V +G+ VVL C     P P 
Sbjct: 22  DIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLC----GPPPH 77

Query: 250 VN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCFARNKLG--TAQG 298
                  W  N   L       R+   ETG+L I  V  +D G YTCF  NK    + QG
Sbjct: 78  FGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQG 137

Query: 299 SGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEP 349
             +  V+    +  +         PE  +     S    C A+ +P   +S   L GS  
Sbjct: 138 PPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGS-- 195

Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
                + ++ +S    L +    + D G Y C A
Sbjct: 196 -PLPGKVKYSKSQAI-LEIPNFQQEDEGFYECIA 227


>gi|395824573|ref|XP_003785537.1| PREDICTED: neural cell adhesion molecule L1-like protein [Otolemur
           garnettii]
          Length = 1209

 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 181/714 (25%), Positives = 298/714 (41%), Gaps = 70/714 (9%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
            L+   + L C   G P P   W K G  + P +R +  NY K+L I++V + D+G+Y C
Sbjct: 254 VLKGDTLLLECFAEGLPTPHIDWKKLGGDL-PKERDT--NYNKTLKIENVSYRDKGNYRC 310

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
             SN +G A ++   + V   P++T +P+    +   +    C+A G P+P I W  NG 
Sbjct: 311 TASNFLGTA-THDFHVIVEEPPHWTKKPQSGVYSTGSSGILLCEAEGEPQPTIKWRVNGS 369

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TE 223
           PI + P  P   V P  I+  NL+ + T  Y C A+N  G +  +  ++V+   P I TE
Sbjct: 370 PIDKHP-FPGDVVFPREISFINLQPNHTAVYQCEASNIHGTILANANIDVVDVRPLILTE 428

Query: 224 APKDEYTVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFAD 281
             ++  TV G    L C  F +P+  V+W  +   K L G R+ I E G L+I+     D
Sbjct: 429 DGENYATVVGYNAFLHCEFFASPEAIVSWQKVEEAKPLEGRRHWIHENGTLQISSTTEDD 488

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--L 339
           +G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L
Sbjct: 489 AGSYSCWVENAIGKTAVTANLDIRNATKLRVSPKNPRIPKLHVLELHCESKCDSHLKDSL 548

Query: 340 SIVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
            + W +  E  +   +E   +  +  +LT++  +  D G Y+C AQT LD I A   LTV
Sbjct: 549 KLSWNKDGEAFEMNGTEDGRIIIDGANLTISNVTLEDQGVYSCVAQTALDSIAAGTQLTV 608

Query: 399 QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVN 458
               + P N  L    + +   ++W   +      +   Y ++    K+  G   EL   
Sbjct: 609 LDVPDPPENLHLSDR-ENRSVRLTWE--AGDDHNSNISEYIIEFEGNKEEPGRWEELTRV 665

Query: 459 KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLG 516
           +G++TT  +    P  +   RV A N      PS+      TP   P    Q++      
Sbjct: 666 QGKATTV-ILPLAPYVRYQFRVKAVNEVGKSEPSQPSDHHETPPAAPDKNPQNIRVQASQ 724

Query: 517 SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
                +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P
Sbjct: 725 PKEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTP 775

Query: 575 ST--KYRIHLAGYTKAGDGAES-KYLFYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPE 627
           +    Y + +    + G G E      Y     PD    + G     + LV ++W+ +P+
Sbjct: 776 TVYAPYDVKVQAVNQLGSGPEPLSVTLYSGEDYPDTAPVIRGVDVINSTLVKVTWSPIPK 835

Query: 628 IEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDG 687
              +     Y+I W        W    +LD R             P E+  ++       
Sbjct: 836 DRVHGRLKGYQINW--------WKTKSLLDGRT-----------HPKEVNFLRF------ 870

Query: 688 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                      G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 871 ----------AGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEAYIFQTPEG 914



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 132/575 (22%), Positives = 236/575 (41%), Gaps = 51/575 (8%)

Query: 53   LFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L C F  +P     W K  +  P+         N   +L I      D GSY+C V N +
Sbjct: 443  LHCEFFASPEAIVSWQKVEEAKPLEGRRHWIHEN--GTLQISSTTEDDAGSYSCWVENAI 500

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA---SGLPEP-EIHWVHNGKPI 166
            G+  + + +L +  A    V P+     +   +   C++   S L +  ++ W  +G+  
Sbjct: 501  GKT-AVTANLDIRNATKLRVSPKNPRIPKLHVLELHCESKCDSHLKDSLKLSWNKDGEAF 559

Query: 167  SQ-APPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
                  + R  +    +TI N+   D G Y C A  +L  +     + VL    ++ + P
Sbjct: 560  EMNGTEDGRIIIDGANLTISNVTLEDQGVYSCVAQTALDSIAAGTQLTVL----DVPDPP 615

Query: 226  KDEYTVD--GKTVVLTCRVFGAPKPEVN-----WIHNQKELTGGRYTILETGDLKITDVA 278
            ++ +  D   ++V LT          ++     +  N++E   GR+  L     K T V 
Sbjct: 616  ENLHLSDRENRSVRLTWEAGDDHNSNISEYIIEFEGNKEE--PGRWEELTRVQGKATTVI 673

Query: 279  FADSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSAT------ 326
               +     ++   A N++G ++ S      E         P++  V+A Q         
Sbjct: 674  LPLAPYVRYQFRVKAVNEVGKSEPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWE 733

Query: 327  -FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
              +    + P L+  + W     P+++E E       +++L V   +         +A  
Sbjct: 734  PLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TVTNHTLRVMTPTVYAPYDVKVQAVN 789

Query: 386  ELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKAVVSWNPVSPQSLRGHFRGYKVQT 442
            +L       ++T+    + P    +I+   VI++    V+W+P+    + G  +GY++  
Sbjct: 790  QLGSGPEPLSVTLYSGEDYPDTAPVIRGVDVINSTLVKVTWSPIPKDRVHGRLKGYQINW 849

Query: 443  WTEK---DGEGSIREL--IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
            W  K   DG    +E+  +   G+  +  V      S+    VLA+N    GP SE   F
Sbjct: 850  WKTKSLLDGRTHPKEVNFLRFAGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEAYIF 909

Query: 498  VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERL 556
             TPEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T ++G L +  
Sbjct: 910  QTPEGVPEQPTFLKIIKVDKDTATLSWGLPKKLNGNLTGYLLQYQIINDTYEIGELNDI- 968

Query: 557  PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
              I+ P+  S +L+ L  +TKY+ +L   T  G G
Sbjct: 969  -NITTPSKPSWRLSNLSATTKYKFYLRACTSKGCG 1002



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 164/419 (39%), Gaps = 56/419 (13%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P   W+KD  P + SD   I   N G   I      S  QG Y C  SN
Sbjct: 54  QIECEAKGNPEPTYTWTKDDKPFDLSDPRIIVFNNSGTFKIPNEGHISHFQGKYRCFASN 113

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECKA-SGLPEPEIHWVH-NGKP 165
            +G A S  I+  V + P F  E  + +   E + +   C    GLP   I+W++   + 
Sbjct: 114 KLGVAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPQGLPPLHIYWMNIELEH 173

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGN-YGC--------------------NATNSLG 204
           I Q       + G   +   N+   D+ N Y C                    N++NS+ 
Sbjct: 174 IQQDERVYMSQKG--DLYFANVEDKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNSI- 230

Query: 205 YVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQKELTGGR 263
              K     +L    E     K   TV  G T++L C   G P P ++W     +L   R
Sbjct: 231 ---KQRKPRLLLPPTESGSGSKSSVTVLKGDTLLLECFAEGLPTPHIDWKKLGGDLPKER 287

Query: 264 YTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQ 323
            T      LKI +V++ D G Y C A N LGTA     + V+E  H T +P+      G 
Sbjct: 288 DTNYNK-TLKIENVSYRDKGNYRCTASNFLGTATHDFHVIVEEPPHWTKKPQSGVYSTGS 346

Query: 324 SATFRCNAVSDPSLKLSIVWLRGSEPID---------FESEPRFV--QSNDYSLTVTKSS 372
           S    C A  +P  + +I W     PID         F  E  F+  Q N  ++   ++S
Sbjct: 347 SGILLCEAEGEP--QPTIKWRVNGSPIDKHPFPGDVVFPREISFINLQPNHTAVYQCEAS 404

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDAKKAVVSWNPV 426
            +     T  A   +D ++ +  +  +       +   + F   +   + +A+VSW  V
Sbjct: 405 NIHG---TILANANIDVVDVRPLILTEDGENYATVVGYNAFLHCEFFASPEAIVSWQKV 460



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 111/297 (37%), Gaps = 39/297 (13%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV----GPNRITIENLRKSDTGNY 195
           +E    EC+A G PEP   W  + KP   +  +PR  V    G  +I  E       G Y
Sbjct: 50  DEYFQIECEAKGNPEPTYTWTKDDKPFDLS--DPRIIVFNNSGTFKIPNEGHISHFQGKY 107

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
            C A+N LG    +    ++   P+  +   D   V +G  +VL C    G P   + W+
Sbjct: 108 RCFASNKLGVAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPQGLPPLHIYWM 167

Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEH 307
           + + E      R  + + GDL   +V   DS  +Y CFA   R +    +    LTV   
Sbjct: 168 NIELEHIQQDERVYMSQKGDLYFANVEDKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSS 227

Query: 308 THITDQ---------------PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDF 352
             I  +                    V  G +    C A   P+  +    L G  P + 
Sbjct: 228 NSIKQRKPRLLLPPTESGSGSKSSVTVLKGDTLLLECFAEGLPTPHIDWKKLGGDLPKER 287

Query: 353 ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFT 409
           ++      + + +L +   S  D G Y C A   L      AT    V +E P ++T
Sbjct: 288 DT------NYNKTLKIENVSYRDKGNYRCTASNFL----GTATHDFHVIVEEPPHWT 334


>gi|28373117|ref|NP_001834.2| contactin-1 isoform 1 precursor [Homo sapiens]
 gi|397510800|ref|XP_003825775.1| PREDICTED: contactin-1 isoform 1 [Pan paniscus]
 gi|2497301|sp|Q12860.1|CNTN1_HUMAN RecName: Full=Contactin-1; AltName: Full=Glycoprotein gp135;
           AltName: Full=Neural cell surface protein F3; Flags:
           Precursor
 gi|469043|gb|AAA67920.1| h-contactin 1 precursor [Homo sapiens]
 gi|119578226|gb|EAW57822.1| contactin 1, isoform CRA_a [Homo sapiens]
 gi|119578227|gb|EAW57823.1| contactin 1, isoform CRA_a [Homo sapiens]
          Length = 1018

 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 185/728 (25%), Positives = 294/728 (40%), Gaps = 90/728 (12%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 241 PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 298

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 299 NIQLEDEGIYECEAENIRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 354

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 355 TGKPIPTIRWLKNGYAYHKG------ELRLYDVTFEN-----AGMYQCIAENTYGAIYAN 403

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 404 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 463

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 464 WEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENAT 523

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ VW      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 524 MQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 583

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            AQT +D   A A L V+ P   P     I+ I A    ++W+  S          Y +Q
Sbjct: 584 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYTIQ 640

Query: 442 TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           T T    D + +  +  + +G          +P  +   RV+A N    G PS   + + 
Sbjct: 641 TKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNRIK 700

Query: 500 PEGVPGTVQSLEAIPLG--SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
            +G    V   +    G  +    + W  +  E   G   GY + ++   G +   +   
Sbjct: 701 TDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVT 760

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEG 610
            P   D      K   + PST +++ +  +   GDG  S           P + P  V  
Sbjct: 761 NP---DTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGV 817

Query: 611 RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT 670
           +  + + + + W  +  +E     ++ R +W  H+  EA N+  V              T
Sbjct: 818 KVLSSSEISVHWEHV--LEKIVESYQIR-YWAAHDKEEAANRVQV--------------T 860

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
            Q Y                            +  ++  +P ++ F  V A N A  GPP
Sbjct: 861 SQEY----------------------------SARLENLLPDTQYFIEVGACNSAGCGPP 892

Query: 731 SEIISFVT 738
           S++I   T
Sbjct: 893 SDMIEAFT 900



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 153/657 (23%), Positives = 245/657 (37%), Gaps = 85/657 (12%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 189 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVV 246

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  + A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 247 QFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 303

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N  G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 304 DEGIYECEAENIRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 362

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 363 RWLKN-----GYAY---HKGELRLYDVTFENAGMYQCIAENTYGAIYANAELKILALAPT 414

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   D SL 
Sbjct: 415 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 470

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC A+       +  TL +  P   + AP N  +    +A  +   S+
Sbjct: 471 INNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASF 530

Query: 424 NPVSPQSLRGHFRGYKVQ-----------TWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
           +P    +    F GY +               + +GE  IR   +      T      V 
Sbjct: 531 DPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVD 590

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
            S   A ++                    G PG    L    + +++  L W +    + 
Sbjct: 591 NSSASADLVV------------------RGPPGPPGGLRIEDIRATSVALTWSRGSDNHS 632

Query: 533 VLMGYKIKYQSV-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
            +  Y I+ +++     K  K  P       I +    +A+   L P  +Y   +     
Sbjct: 633 PISKYTIQTKTILSDDWKDAKTDPP------IIEGNMEAARAVDLIPWMEYEFRVVATNT 686

Query: 588 AGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            G G  S      K     P   P +V G G     L I+W  +    H   +F Y + +
Sbjct: 687 LGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAF 746

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
           +  + GE W +  V +      V  ++ T  P   +++KV     + DG  S+  +I
Sbjct: 747 KPFD-GEEWKKVTVTNPDTGRYVHKDE-TMSPSTAFQVKVKAFNNKGDGPYSLVAVI 801



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 140/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   ++  SDR S    G +L+I + +   D G Y C  S
Sbjct: 60  KVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 117

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 118 NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 171

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 172 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 228

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 229 LIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 288

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 289 STSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 348

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+       + E R      Y +T       ++G Y C A+ 
Sbjct: 349 YWPCVATGKPI--PTIRWLKNGYAY-HKGELRL-----YDVTFE-----NAGMYQCIAEN 395

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 396 TYGAIYANAELKI 408



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   +     +    VG N +   
Sbjct: 47  PINTIYPE---ESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTS-DRYSMVGGNLVINN 102

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   +
Sbjct: 103 PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 162

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 163 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 222

Query: 299 SGSLT----VKEHT------HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                    + E T       I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 223 FSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV--PDIRWRKVLE 280

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 281 PMPSTAE---ISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 328



 Score = 42.4 bits (98), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+    ++V+ + +  V W  V    L      Y+++ W   D E +   + V   
Sbjct: 808 PSEAPTEVG-VKVLSSSEISVHWEHV----LEKIVESYQIRYWAAHDKEEAANRVQVTSQ 862

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GPPS++I   T +  P     + +     S +
Sbjct: 863 E-YSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKAPPSQPPRIISSVRSGSRY 921

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYK+ Y+
Sbjct: 922 IITWDHVVALSNESTVTGYKVLYR 945


>gi|66505698|ref|XP_623565.1| PREDICTED: protein sidekick isoform 2 [Apis mellifera]
          Length = 2176

 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 162/610 (26%), Positives = 256/610 (41%), Gaps = 58/610 (9%)

Query: 53  LFCIFGGTPLPQ--TIWSKDGVPINPSDRIS---QGNYGKSLIIKHVEFSDQGSYTCEVS 107
           + CI     L +  T+W+KDG+PI  S RIS     ++ ++L +     +  G Y+C V 
Sbjct: 254 IHCIANARSLHELRTLWTKDGIPIENS-RISYSFNDSWNRTLALISANITYTGVYSCHVD 312

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET-------VTFECKASGLPEPEIHWV 160
              GE  + +    V+       +P FI   + ET       VT  C   G+P P+I W 
Sbjct: 313 LRSGEYPTMNASAKVVVYE----KPMFITELKRETLSDYGSTVTLPCDVVGVPPPKITWF 368

Query: 161 HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
            N + +     +         +TI+ L  SD+G + C A+N  G      ++      P 
Sbjct: 369 RNAESVDHLLGSRYAMEEDGSLTIKKLTMSDSGMFQCLASNEAGEASSYTWLKAKTSGPV 428

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT--GGRYTILETGDLKITDVA 278
           +   P+++  +DGK   LTC    AP P   WI+N        GR  +L+ GDL I  V 
Sbjct: 429 MENGPQNQTILDGKDATLTCNAVAAPIPNTTWIYNDTMPVEIAGRVQVLDNGDLLIAAVK 488

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
             D+G+YTC   N+ G+  GS  L+V   T I   P D  V  G +A  +C   +DPS+ 
Sbjct: 489 PNDAGKYTCIRANEAGSVNGSAYLSVLVRTQIIQPPVDTSVLLGYTAELQCKVSNDPSVL 548

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             I W   ++ I+ ++  R    ND +L +      D G+Y C   +        A L+V
Sbjct: 549 YDIAWFHNTQVINTQASQRVKMRNDGTLEIAAVRASDVGEYMCSVVSPGGNETRSARLSV 608

Query: 399 -QVPLEAPSNFTL--IQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGEGSIR 453
            ++P  AP N     ++ I  +   VSW P       G+   + + VQ   E    G I 
Sbjct: 609 IELPF-APINVMANRVERISPRTINVSWVP----GFDGNSPTKKFIVQR-REVSDLGPIP 662

Query: 454 ELIVN--------KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT-----P 500
           +  +N          +S    ++    A+    RV A N    GPPS+  + V      P
Sbjct: 663 DSALNWIIECNNVSAQSRWVILNNLKAAAAYQFRVTAENSVGEGPPSDPSNVVVLPQEPP 722

Query: 501 EGVP-GTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLERLP 557
            G P G V S  +    SS    +W  P  E  NG ++GY ++Y+ + G    P    + 
Sbjct: 723 SGPPVGFVGSARS----SSEIITQWQLPLEEYRNGHILGYVLRYR-LYGYNDNPWT--IQ 775

Query: 558 YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG-----DGAESKYLFYVPFKNPDNVEGRG 612
            I++    +  +  L     Y + +A Y   G     +G + K    +P   P NV+ + 
Sbjct: 776 NITNEAQKNYLITDLITWKDYIVQIAAYNDKGVGIFTEGLKIKTKEGIPEAPPTNVKAKA 835

Query: 613 STPNNLVISW 622
                + + W
Sbjct: 836 MNSTAIKVWW 845



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 148/609 (24%), Positives = 239/609 (39%), Gaps = 67/609 (11%)

Query: 34  KQQYVTRKKEVALRN--KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGK---- 87
           K  ++T  K   L +    V L C   G P P+  W ++   +   D +    Y      
Sbjct: 332 KPMFITELKRETLSDYGSTVTLPCDVVGVPPPKITWFRNAESV---DHLLGSRYAMEEDG 388

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
           SL IK +  SD G + C  SN  GEA SY+   +  + P     P+     + +  T  C
Sbjct: 389 SLTIKKLTMSDSGMFQCLASNEAGEASSYTWLKAKTSGPVMENGPQNQTILDGKDATLTC 448

Query: 148 KASGLPEPEIHWVHNG-KPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGY 205
            A   P P   W++N   P+  A    R +V  N  + I  ++ +D G Y C   N  G 
Sbjct: 449 NAVAAPIPNTTWIYNDTMPVEIAG---RVQVLDNGDLLIAAVKPNDAGKYTCIRANEAGS 505

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKEL---T 260
           V    Y++VL    +I + P D   + G T  L C+V   P    ++ W HN + +    
Sbjct: 506 VNGSAYLSVLVRT-QIIQPPVDTSVLLGYTAELQCKVSNDPSVLYDIAWFHNTQVINTQA 564

Query: 261 GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R  +   G L+I  V  +D GEY C   +  G    S  L+V E            VE
Sbjct: 565 SQRVKMRNDGTLEIAAVRASDVGEYMCSVVSPGGNETRSARLSVIELPFAPINVMANRVE 624

Query: 321 AGQSATFRCNAV-----SDPSLKLSIVWLRGSE--PIDFESEPRFVQSNDYSLT---VTK 370
                T   + V     + P+ K  +     S+  PI   +    ++ N+ S     V  
Sbjct: 625 RISPRTINVSWVPGFDGNSPTKKFIVQRREVSDLGPIPDSALNWIIECNNVSAQSRWVIL 684

Query: 371 SSELDSGQYTCRAQTELDFIE---AQATLTVQVPLEAPSNFTLIQVIDAKKA---VVSWN 424
           ++   +  Y  R   E    E   +  +  V +P E PS   +  V  A+ +   +  W 
Sbjct: 685 NNLKAAAAYQFRVTAENSVGEGPPSDPSNVVVLPQEPPSGPPVGFVGSARSSSEIITQWQ 744

Query: 425 PVSPQSLRGHFRGY--KVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLA 482
               +   GH  GY  + + +   D   +I+  I N+ +      D  +       ++ A
Sbjct: 745 LPLEEYRNGHILGYVLRYRLYGYNDNPWTIQN-ITNEAQKNYLITD-LITWKDYIVQIAA 802

Query: 483 FNGAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWV--KPEQPNGVLMGYKI 539
           +N    G  +E +   T EG+P     +++A  + S+A  + W    P++ NG+  GYK+
Sbjct: 803 YNDKGVGIFTEGLKIKTKEGIPEAPPTNVKAKAMNSTAIKVWWKPPNPQKINGINQGYKL 862

Query: 540 --------------KYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
                         K  +V  +   PL E+          SA + GL+  T Y I +  +
Sbjct: 863 QAWIGNNFTEANEYKSMTVPPSLFDPLAEQ----------SAIMTGLKKYTLYNITVLCF 912

Query: 586 TKAGDGAES 594
           T  GDG +S
Sbjct: 913 TDPGDGEKS 921



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 96/405 (23%), Positives = 154/405 (38%), Gaps = 38/405 (9%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           N+   L C   G P P+  W KDGVP+  S+ ++   Y +   I+     D G Y C  +
Sbjct: 61  NRTKFLQCQARGNPQPKYKWFKDGVPL--SNELTSEIYYR---IQSTRREDAGVYHCVAT 115

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC--KASGLPEPEIHWVHNGKP 165
           N VG   S  I  +V     F    E I + +  +            P P++ W  +   
Sbjct: 116 NDVGSIFSERITFAVAYMGLFEDLTERIVSVKSGSAAVLTLPPIESHPAPDVTWFTSDGS 175

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS-LGYVYKDVYVNVLAH------- 217
           +       +     + + I N  +SD G Y   A N+ LG      +  +          
Sbjct: 176 LLYG---IKYASVHHTLLILNASESDQGLYRARAINTQLGKEENSPFFKLQITGDANAEI 232

Query: 218 APEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVN--WIHNQKELTGGR--YTILETGD- 271
           AP I   P+D   + D     + C        E+   W  +   +   R  Y+  ++ + 
Sbjct: 233 APTIIVKPQDTQIIKDQDVTYIHCIANARSLHELRTLWTKDGIPIENSRISYSFNDSWNR 292

Query: 272 -LKITDVAFADSGEYTCFARNKLG---TAQGSGSLTVKEH-THITDQPEDYEVEAGQSAT 326
            L +       +G Y+C    + G   T   S  + V E    IT+   +   + G + T
Sbjct: 293 TLALISANITYTGVYSCHVDLRSGEYPTMNASAKVVVYEKPMFITELKRETLSDYGSTVT 352

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
             C+ V  P  K  I W R +E +D     R+    D SLT+ K +  DSG + C A  E
Sbjct: 353 LPCDVVGVPPPK--ITWFRNAESVDHLLGSRYAMEEDGSLTIKKLTMSDSGMFQCLASNE 410

Query: 387 L----DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVS 427
                 +   +A  +  V    P N T   ++D K A ++ N V+
Sbjct: 411 AGEASSYTWLKAKTSGPVMENGPQNQT---ILDGKDATLTCNAVA 452



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 115/281 (40%), Gaps = 33/281 (11%)

Query: 123 LAAPYFTVEPEFIN--AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN 180
           L  P FT +P       +E  T   +C+A G P+P+  W  +G P+S            N
Sbjct: 42  LQEPRFTTQPSSSGNILSENRTKFLQCQARGNPQPKYKWFKDGVPLS------------N 89

Query: 181 RIT------IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            +T      I++ R+ D G Y C ATN +G ++ +     +A+     +  +   +V  G
Sbjct: 90  ELTSEIYYRIQSTRREDAGVYHCVATNDVGSIFSERITFAVAYMGLFEDLTERIVSVKSG 149

Query: 234 KTVVLTC-RVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARN- 291
              VLT   +   P P+V W  +   L  G         L I + + +D G Y   A N 
Sbjct: 150 SAAVLTLPPIESHPAPDVTWFTSDGSLLYGIKYASVHHTLLILNASESDQGLYRARAINT 209

Query: 292 KLGTAQGS--------GSLTVKEHTHITDQPEDYEVEAGQSATF-RCNAVSDPSLKLSIV 342
           +LG  + S        G    +    I  +P+D ++   Q  T+  C A +    +L  +
Sbjct: 210 QLGKEENSPFFKLQITGDANAEIAPTIIVKPQDTQIIKDQDVTYIHCIANARSLHELRTL 269

Query: 343 WLRGSEPIDFES-EPRFVQSNDYSLTVTKSSELDSGQYTCR 382
           W +   PI+       F  S + +L +  ++   +G Y+C 
Sbjct: 270 WTKDGIPIENSRISYSFNDSWNRTLALISANITYTGVYSCH 310



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 24/202 (11%)

Query: 403  EAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGES 462
            EAP      + +++    V W P +PQ + G  +GYK+Q W   +   +      N+ +S
Sbjct: 825  EAPPTNVKAKAMNSTAIKVWWKPPNPQKINGINQGYKLQAWIGNNFTEA------NEYKS 878

Query: 463  TTTEVDKFVPASKNFA-------------RVLAFNGAYNGPPSEIISFVTPEGVPGTVQS 509
             T     F P ++  A              VL F    +G  S  +   T E VP  V++
Sbjct: 879  MTVPPSLFDPLAEQSAIMTGLKKYTLYNITVLCFTDPGDGEKSSPVQIRTREDVPEEVEN 938

Query: 510  LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKL 569
            L+   +   +  +KW  P++ NG+L+ Y++KY      K  P   R+   +     SAK+
Sbjct: 939  LQFENISDRSLTVKWNPPQEINGILIFYQLKYM----IKDMPDSLRIENFTS-HVLSAKI 993

Query: 570  AGLEPSTKYRIHLAGYTKAGDG 591
              L+  T YR  +  +T  G G
Sbjct: 994  EHLQAMTHYRFEVVAWTSIGPG 1015



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 16/157 (10%)

Query: 480  VLAFNGAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWVKPE--QPNGVLMG 536
            VL FN    GPPS  ++    E VP G  Q L+A P+ S+  +L+W  P+    NG L+G
Sbjct: 1612 VLPFNSEGEGPPSPPVTVYVGEAVPTGEPQYLKAEPISSTEVHLRWKPPQANMQNGDLLG 1671

Query: 537  YKIKYQSVKG-----TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            YKI Y           K    +E +P     +  +  L  L+  T+YRI +  +  AGDG
Sbjct: 1672 YKIFYLVTDSPQDLENKQEEEIEVVP----ASYLTHSLVFLDKYTEYRIQVLAFNPAGDG 1727

Query: 592  AESKYLFYVPFKN----PDNVEGRGSTPNNLVISWTA 624
              +  +     ++    P N++    T  +L +SW A
Sbjct: 1728 PRTPSITVRTKQDIPGPPYNLQFSEITMTSLRVSWEA 1764



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 4/136 (2%)

Query: 414  IDAKKAVVSWNPVSPQSLRGHFRGYKV---QTWTEKDGEGSIRELIVNKGESTTTEVDKF 470
            I + +  + W P       G   GYK+    T + +D E    E I     S  T    F
Sbjct: 1648 ISSTEVHLRWKPPQANMQNGDLLGYKIFYLVTDSPQDLENKQEEEIEVVPASYLTHSLVF 1707

Query: 471  VPASKNF-ARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQ 529
            +     +  +VLAFN A +GP +  I+  T + +PG   +L+   +  ++  + W  P+ 
Sbjct: 1708 LDKYTEYRIQVLAFNPAGDGPRTPSITVRTKQDIPGPPYNLQFSEITMTSLRVSWEAPKL 1767

Query: 530  PNGVLMGYKIKYQSVK 545
             NG ++GY + Y++ +
Sbjct: 1768 RNGEIVGYIVTYETAE 1783



 Score = 41.6 bits (96), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 78/190 (41%), Gaps = 26/190 (13%)

Query: 420  VVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTT-EVDKFVPASKNFA 478
            +V W  V  +   G   G+KV   +        + +  N   +TT  E+ KFV   +   
Sbjct: 1248 LVKWGDVPIEHQNGQIEGFKVYYGSNARSAFQYKNIPSNTTFTTTLTELRKFV---QYHI 1304

Query: 479  RVLAF----NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
            +VLA+    +G  + PP  + +F   E  PG   ++    +  +   + W  PE PNG +
Sbjct: 1305 QVLAYTRLGDGTLSTPPVRVQTF---EDAPGPPSNVSFPDVSFTTARIIWDTPEDPNGEI 1361

Query: 535  MGYKIKY-----QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
            + YK+ +     Q  + +K  P  +R          + +  GLEP   Y   +   T+ G
Sbjct: 1362 LAYKVMFHLNNSQDHQFSKEFPASDR----------TFRATGLEPEKYYMFSVTAQTRLG 1411

Query: 590  DGAESKYLFY 599
             G  +  L +
Sbjct: 1412 WGKTAYALVF 1421


>gi|426224671|ref|XP_004006492.1| PREDICTED: contactin-1 isoform 1 [Ovis aries]
 gi|426224673|ref|XP_004006493.1| PREDICTED: contactin-1 isoform 2 [Ovis aries]
          Length = 1018

 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 185/725 (25%), Positives = 293/725 (40%), Gaps = 84/725 (11%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 241 PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 298

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 299 NIQLEDEGIYECEAENNRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 354

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG          R ++    +T EN      G Y C A N+ G +Y +
Sbjct: 355 TGKPIPTIRWLKNGYSYH------RGELRLYDVTFEN-----AGMYQCIAENTHGAIYAN 403

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+  W    + L    R  I
Sbjct: 404 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFLWSKGTERLVNSSRILI 463

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++  +D G YTCF  N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 464 WEDGSLEINNITRSDGGVYTCFVENNKGKANSTGTLVITDPTRIILAPINADITVGENAT 523

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ VW      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 524 MQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 583

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            AQT +D   A A L V+ P   P     I+ + A    ++W+  S          Y +Q
Sbjct: 584 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDVRATSVALTWSRGSDN--HSPISKYTIQ 640

Query: 442 TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           T T    D + +  +  + +G          +P  +   RV+A N    G PS   + + 
Sbjct: 641 TKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGMGEPSIPSNKIK 700

Query: 500 PEGVPGTVQSLEAIPLGSS--AFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
            +G    V   +    G S     + W  +  E   G   GY + ++   G +   +   
Sbjct: 701 TDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT-- 758

Query: 556 LPYISDPTTTS--AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS 613
              +++P T     K   + PST +++ +  +   GDG  S  L  V     D       
Sbjct: 759 ---VTNPDTGRYVHKDETMRPSTAFQVKVKAFNNKGDGPYS--LTAVIHSAQD---APSE 810

Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
            P  + +   +  EI  +  H   +I                                + 
Sbjct: 811 APTAVGVKVLSSSEISVHWEHVVEKI-------------------------------VES 839

Query: 674 YEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 733
           Y+I+    W   D E +   + V   E  +  ++  +P ++ F  V A N A  GPPS++
Sbjct: 840 YQIRY---WASHDKEAAAHRVQVASQE-YSARLENLLPDTQYFVEVRACNSAGCGPPSDM 895

Query: 734 ISFVT 738
           I   T
Sbjct: 896 IETFT 900



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 152/657 (23%), Positives = 248/657 (37%), Gaps = 85/657 (12%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 189 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTKPYPADIVV 246

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  + A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 247 QFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 303

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N+ G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 304 DEGIYECEAENNRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 362

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 363 RWLKN-----GYSY---HRGELRLYDVTFENAGMYQCIAENTHGAIYANAELKILALAPT 414

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K   +W +G+E +   S  R +   D SL 
Sbjct: 415 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKF--LWSKGTERLVNSS--RILIWEDGSLE 470

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC  +       +  TL +  P   + AP N  +    +A  +   S+
Sbjct: 471 INNITRSDGGVYTCFVENNKGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASF 530

Query: 424 NPVSPQSLRGHFRGYKV-----------QTWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
           +P    +    F GY +               + +GE  IR   +      T      V 
Sbjct: 531 DPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVD 590

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
            S   A ++                    G PG    L    + +++  L W +    + 
Sbjct: 591 NSSASADLVV------------------RGPPGPPGGLRIEDVRATSVALTWSRGSDNHS 632

Query: 533 VLMGYKIKYQSV-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
            +  Y I+ +++     K  K  P     P I +    +A+   L P  +Y   +     
Sbjct: 633 PISKYTIQTKTILSDDWKDAKTDP-----PII-EGNMEAARAVDLIPWMEYEFRVVATNT 686

Query: 588 AGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            G G  S      K     P   P +V G G +   L I+W  +    H   +F Y + +
Sbjct: 687 LGMGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNNFGYIVAF 746

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
           +  + GE W +  V +      V  ++ T +P   +++KV     + DG  S+  +I
Sbjct: 747 KPFD-GEEWKKVTVTNPDTGRYVHKDE-TMRPSTAFQVKVKAFNNKGDGPYSLTAVI 801



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 139/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   I+  SDR S    G +L+I + +   D G Y C  S
Sbjct: 60  KVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 117

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 118 NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 171

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 172 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 228

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 229 LIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 288

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 289 STSGAVLKIFNIQLEDEGIYECEAENNRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 348

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+         E R      Y +T       ++G Y C A+ 
Sbjct: 349 YWPCVATGKPI--PTIRWLKNGYSY-HRGELRL-----YDVTFE-----NAGMYQCIAEN 395

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 396 THGAIYANAELKI 408



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   I     +    VG N +   
Sbjct: 47  PINTIYPE---ESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTS-DRYSMVGGNLVINN 102

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   +
Sbjct: 103 PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 162

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 163 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 222

Query: 299 SGSL---------TVKEH-THITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                        T K +   I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 223 FSKFIPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV--PDIRWRKVLE 280

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 281 PMPSTAE---ISTSGAVLKIFNIQLEDEGIYECEAENNRGKDKHQARIYVQ 328



 Score = 42.7 bits (99), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+    ++V+ + +  V W  V  + +      Y+++ W   D E +   + V   
Sbjct: 808 PSEAPTAVG-VKVLSSSEISVHWEHVVEKIVES----YQIRYWASHDKEAAAHRVQVASQ 862

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GPPS++I   T +  P     + +     S +
Sbjct: 863 E-YSARLENLLPDTQYFVEVRACNSAGCGPPSDMIETFTKKAPPSQPPRIISSIRSGSRY 921

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYK+ Y+
Sbjct: 922 IITWDHVVALSNESTVTGYKVLYR 945


>gi|28373119|ref|NP_778203.1| contactin-1 isoform 2 precursor [Homo sapiens]
 gi|397510802|ref|XP_003825776.1| PREDICTED: contactin-1 isoform 2 [Pan paniscus]
 gi|469045|gb|AAA67921.1| h-contactin 2 precursor [Homo sapiens]
 gi|119578228|gb|EAW57824.1| contactin 1, isoform CRA_b [Homo sapiens]
          Length = 1007

 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 185/728 (25%), Positives = 294/728 (40%), Gaps = 90/728 (12%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 230 PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 287

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 288 NIQLEDEGIYECEAENIRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 343

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 344 TGKPIPTIRWLKNGYAYHKG------ELRLYDVTFEN-----AGMYQCIAENTYGAIYAN 392

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 393 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 452

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 453 WEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENAT 512

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ VW      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 513 MQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 572

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            AQT +D   A A L V+ P   P     I+ I A    ++W+  S          Y +Q
Sbjct: 573 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYTIQ 629

Query: 442 TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           T T    D + +  +  + +G          +P  +   RV+A N    G PS   + + 
Sbjct: 630 TKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNRIK 689

Query: 500 PEGVPGTVQSLEAIPLG--SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
            +G    V   +    G  +    + W  +  E   G   GY + ++   G +   +   
Sbjct: 690 TDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVT 749

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEG 610
            P   D      K   + PST +++ +  +   GDG  S           P + P  V  
Sbjct: 750 NP---DTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGV 806

Query: 611 RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT 670
           +  + + + + W  +  +E     ++ R +W  H+  EA N+  V              T
Sbjct: 807 KVLSSSEISVHWEHV--LEKIVESYQIR-YWAAHDKEEAANRVQV--------------T 849

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
            Q Y                            +  ++  +P ++ F  V A N A  GPP
Sbjct: 850 SQEY----------------------------SARLENLLPDTQYFIEVGACNSAGCGPP 881

Query: 731 SEIISFVT 738
           S++I   T
Sbjct: 882 SDMIEAFT 889



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 154/657 (23%), Positives = 246/657 (37%), Gaps = 85/657 (12%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 178 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVV 235

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  + A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 236 QFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 292

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N  G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 293 DEGIYECEAENIRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 351

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 352 RWLKN-----GYAY---HKGELRLYDVTFENAGMYQCIAENTYGAIYANAELKILALAPT 403

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   D SL 
Sbjct: 404 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 459

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC A+       +  TL +  P   + AP N  +    +A  +   S+
Sbjct: 460 INNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASF 519

Query: 424 NPVSPQSLRGHFRGYKVQ-----------TWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
           +P    +    F GY +               + +GE  IR   +      T      V 
Sbjct: 520 DPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVD 579

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
            S   A ++                    G PG    L    + +++  L W +    + 
Sbjct: 580 NSSASADLVV------------------RGPPGPPGGLRIEDIRATSVALTWSRGSDNHS 621

Query: 533 VLMGYKIKYQSV-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
            +  Y I+ +++     K  K  P     P I +    +A+   L P  +Y   +     
Sbjct: 622 PISKYTIQTKTILSDDWKDAKTDP-----PII-EGNMEAARAVDLIPWMEYEFRVVATNT 675

Query: 588 AGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            G G  S      K     P   P +V G G     L I+W  +    H   +F Y + +
Sbjct: 676 LGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAF 735

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
           +  + GE W +  V +      V  ++ T  P   +++KV     + DG  S+  +I
Sbjct: 736 KPFD-GEEWKKVTVTNPDTGRYVHKDE-TMSPSTAFQVKVKAFNNKGDGPYSLVAVI 790



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 140/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   ++  SDR S    G +L+I + +   D G Y C  S
Sbjct: 49  KVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 106

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 107 NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 160

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 161 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 217

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 218 LIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 277

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 278 STSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 337

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+       + E R      Y +T       ++G Y C A+ 
Sbjct: 338 YWPCVATGKPI--PTIRWLKNGYAY-HKGELRL-----YDVTFE-----NAGMYQCIAEN 384

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 385 TYGAIYANAELKI 397



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   +     +    VG N +   
Sbjct: 36  PINTIYPE---ESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTS-DRYSMVGGNLVINN 91

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   +
Sbjct: 92  PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 151

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 152 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 211

Query: 299 SGSLT----VKEHT------HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                    + E T       I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 212 FSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV--PDIRWRKVLE 269

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 270 PMPSTAE---ISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 317



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+    ++V+ + +  V W  V    L      Y+++ W   D E +   + V   
Sbjct: 797 PSEAPTEVG-VKVLSSSEISVHWEHV----LEKIVESYQIRYWAAHDKEEAANRVQVTSQ 851

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GPPS++I   T +  P     + +     S +
Sbjct: 852 E-YSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKAPPSQPPRIISSVRSGSRY 910

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYK+ Y+
Sbjct: 911 IITWDHVVALSNESTVTGYKVLYR 934


>gi|414791|emb|CAA79696.1| contactin [Homo sapiens]
          Length = 1018

 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 185/728 (25%), Positives = 294/728 (40%), Gaps = 90/728 (12%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 241 PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 298

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 299 NIQLEDEGIYECEAENIRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 354

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 355 TGKPIPTIRWLKNGYAYHKG------ELRLYDVTFEN-----AGMYQCIAENTYGAIYAN 403

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 404 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 463

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 464 WEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENAT 523

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ VW      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 524 MQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 583

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            AQT +D   A A L V+ P   P     I+ I A    ++W+  S          Y +Q
Sbjct: 584 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYTIQ 640

Query: 442 TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           T T    D + +  +  + +G          +P  +   RV+A N    G PS   + + 
Sbjct: 641 TKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNRIK 700

Query: 500 PEGVPGTVQSLEAIPLG--SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
            +G    V   +    G  +    + W  +  E   G   GY + ++   G +   +   
Sbjct: 701 TDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVT 760

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEG 610
            P   D      K   + PST +++ +  +   GDG  S           P + P  V  
Sbjct: 761 NP---DTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLLAVINSAQDAPSEAPTEVGV 817

Query: 611 RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT 670
           +  + + + + W  +  +E     ++ R +W  H+  EA N+  V              T
Sbjct: 818 KVLSSSEISVHWEHV--LEKIVESYQIR-YWAAHDKEEAANRVQV--------------T 860

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
            Q Y                            +  ++  +P ++ F  V A N A  GPP
Sbjct: 861 SQEY----------------------------SARLENLLPDTQYFIEVGACNSAGCGPP 892

Query: 731 SEIISFVT 738
           S++I   T
Sbjct: 893 SDMIEAFT 900



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 154/657 (23%), Positives = 246/657 (37%), Gaps = 85/657 (12%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 189 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVV 246

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  + A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 247 QFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 303

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N  G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 304 DEGIYECEAENIRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 362

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 363 RWLKN-----GYAY---HKGELRLYDVTFENAGMYQCIAENTYGAIYANAELKILALAPT 414

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   D SL 
Sbjct: 415 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 470

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC A+       +  TL +  P   + AP N  +    +A  +   S+
Sbjct: 471 INNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASF 530

Query: 424 NPVSPQSLRGHFRGYKVQ-----------TWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
           +P    +    F GY +               + +GE  IR   +      T      V 
Sbjct: 531 DPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVD 590

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
            S   A ++                    G PG    L    + +++  L W +    + 
Sbjct: 591 NSSASADLVV------------------RGPPGPPGGLRIEDIRATSVALTWSRGSDNHS 632

Query: 533 VLMGYKIKYQSV-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
            +  Y I+ +++     K  K  P     P I +    +A+   L P  +Y   +     
Sbjct: 633 PISKYTIQTKTILSDDWKDAKTDP-----PII-EGNMEAARAVDLIPWMEYEFRVVATNT 686

Query: 588 AGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            G G  S      K     P   P +V G G     L I+W  +    H   +F Y + +
Sbjct: 687 LGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAF 746

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
           +  + GE W +  V +      V  ++ T  P   +++KV     + DG  S+  +I
Sbjct: 747 KPFD-GEEWKKVTVTNPDTGRYVHKDE-TMSPSTAFQVKVKAFNNKGDGPYSLLAVI 801



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 140/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   ++  SDR S    G +L+I + +   D G Y C  S
Sbjct: 60  KVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 117

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 118 NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 171

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 172 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 228

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 229 LIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 288

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 289 STSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 348

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+       + E R      Y +T       ++G Y C A+ 
Sbjct: 349 YWPCVATGKPI--PTIRWLKNGYAY-HKGELRL-----YDVTFE-----NAGMYQCIAEN 395

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 396 TYGAIYANAELKI 408



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   +     +    VG N +   
Sbjct: 47  PINTIYPE---ESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTS-DRYSMVGGNLVINN 102

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   +
Sbjct: 103 PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 162

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 163 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 222

Query: 299 SGSLT----VKEHT------HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                    + E T       I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 223 FSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV--PDIRWRKVLE 280

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 281 PMPSTAE---ISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 328



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+    ++V+ + +  V W  V    L      Y+++ W   D E +   + V   
Sbjct: 808 PSEAPTEVG-VKVLSSSEISVHWEHV----LEKIVESYQIRYWAAHDKEEAANRVQVTSQ 862

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GPPS++I   T +  P     + +     S +
Sbjct: 863 E-YSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKAPPSQPPRIISSVRSGSRY 921

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYK+ Y+
Sbjct: 922 IITWDHVVALSNESTVTGYKVLYR 945


>gi|109035933|ref|XP_001101681.1| PREDICTED: contactin-6 isoform 2 [Macaca mulatta]
 gi|355559496|gb|EHH16224.1| Neural recognition molecule NB-3 [Macaca mulatta]
          Length = 1029

 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 188/727 (25%), Positives = 309/727 (42%), Gaps = 100/727 (13%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    + S+      L I + +  D+G Y 
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQ--AILEIPNFQQEDEGFYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C  SN  G   +    L   A P +  + +    +  + + ++CKASG P P   W+ NG
Sbjct: 297 CIASNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDNLLWKCKASGKPNPWYTWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++   P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 356 ERLN---PEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSK 412

Query: 224 AP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
           +P  K+ +   G  +V+ C+    P+  ++W    + L    R  +LE G LKI +V  +
Sbjct: 413 SPVKKNSFVQVGGDIVIECKPNAFPRAAISWKRGTETLRQSKRMFLLEDGSLKIYNVTRS 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ GTA+ +GSL VKE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 473 DAGSYTCIATNQFGTAKNAGSLIVKERTVITVPPSKMDVTVGESIVLPCQVSHDPSIEVV 532

Query: 341 IVWLRGSEPIDF-ESEPRFVQSNDYSL--TVTKSSELD-SGQYTCRAQTELDFIEAQATL 396
            VW    + ID  +    F +    S+   + ++ +L+ SG+Y C  QT L+ + A A +
Sbjct: 533 FVWFFNGDIIDLKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADI 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW    P +     + + +QT T          ++
Sbjct: 593 IVRGPPGPPEDVK-VEEISSTTSQLSWR-AGPDN-NSPIQIFTIQTQTPFSVGWQAVATV 649

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLE 511
            E++   G++    V    P  +   RV+A N    G PS+    + T   VP       
Sbjct: 650 PEIL--NGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVNV 707

Query: 512 AIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
               GS S   + W  +  E  NG   GY I ++ V  T               T T  K
Sbjct: 708 NGGGGSRSELVITWESIPEELQNGEGFGYIIMFRPVGST---------------TWTKEK 752

Query: 569 LAGLE------------PSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS--- 613
           +A +E            P + + + +  Y   G+G+ S        ++   +  RG+   
Sbjct: 753 VASVESSRFVYRNESIIPLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQ 812

Query: 614 --TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
             + + + +SW A+                       AWN       R +  VL      
Sbjct: 813 SFSASEMEVSWNAI-----------------------AWN-------RNTGRVLG----- 837

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
             YE   V  WT+   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S
Sbjct: 838 --YE---VLYWTDDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGTGPSS 891

Query: 732 EIISFVT 738
             ++  T
Sbjct: 892 PPVNVTT 898



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 165/660 (25%), Positives = 260/660 (39%), Gaps = 87/660 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC ++N   EA+      SV   P   V+                
Sbjct: 180 NLYIAKVEPSDVGNYTCFITNK--EAQR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 232

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ +V  EC A G P P+I W   +G P+   P   +       + I N ++
Sbjct: 233 FPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPL---PGKVKYSKSQAILEIPNFQQ 289

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A+N  G       + +    PE  +  ++ Y      ++  C+  G P P 
Sbjct: 290 EDEGFYECIASNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDNLLWKCKASGKPNPW 348

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L       +E G L IT +  +DSG Y C A NK      +  L V     
Sbjct: 349 YTWLKNGERLNPEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAP 408

Query: 309 HITDQP--EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P  ++  V+ G      C   + P  + +I W RG+E +      R     D SL
Sbjct: 409 DFSKSPVKKNSFVQVGGDIVIECKPNAFP--RAAISWKRGTETL--RQSKRMFLLEDGSL 464

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV------ 420
            +   +  D+G YTC A  +    +   +L V+         T+I V  +K  V      
Sbjct: 465 KIYNVTRSDAGSYTCIATNQFGTAKNAGSLIVK-------ERTVITVPPSKMDVTVGESI 517

Query: 421 -----VSWNPVSPQSLRGHFRG-----YKVQTWTEKDGEGSIRELIVNKGESTTTEVDKF 470
                VS +P         F G      K     E+ G  S+ +L++   +   +   K+
Sbjct: 518 VLPCQVSHDPSIEVVFVWFFNGDIIDLKKGMAHFERIGGESVGDLMIRNIQLNHS--GKY 575

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
           +   +     L+            ++ +   G PG  + ++   + S+   L W      
Sbjct: 576 LCTVQTTLESLS-----------AVADIIVRGPPGPPEDVKVEEISSTTSQLSWRAGPDN 624

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           N  +  + I+ Q+     VG   +  +P I +  T +A + GL P  +Y   +      G
Sbjct: 625 NSPIQIFTIQTQT--PFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIG 682

Query: 590 DGAESK------YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  SK          VP   P NV G G + + LVI+W ++PE   N   F Y I +R 
Sbjct: 683 IGEPSKPSELLRTKASVPAVAPVNVNGGGGSRSELVITWESIPEELQNGEGFGYIIMFRP 742

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
             +   W ++ V     S  V  N+      P+E+KV       +GEGS+  + IV  GE
Sbjct: 743 VGS-TTWTKEKVASVESSRFVYRNESIIPLSPFEVKV--GVYNNEGEGSLSTVTIVYSGE 799



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 152/640 (23%), Positives = 245/640 (38%), Gaps = 83/640 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +NP +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 339 CKASGKPNPWYTWLKNGERLNPEERIQIEN--GTLIITMLNVSDSGVYQCAAENKY-QII 395

Query: 115 SYSIDLSVLA-APYFTVEP----EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
             + +L VLA AP F+  P     F+    +  +  ECK +  P   I W    + + Q+
Sbjct: 396 YANAELRVLASAPDFSKSPVKKNSFVQVGGD--IVIECKPNAFPRAAISWKRGTETLRQS 453

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
                 + G   + I N+ +SD G+Y C ATN  G   K+    ++     IT  P    
Sbjct: 454 KRMFLLEDG--SLKIYNVTRSDAGSYTCIATNQFGTA-KNAGSLIVKERTVITVPPSKMD 510

Query: 230 TVDGKTVVLTCRVFGAPKPEVN--WIHN-----------QKELTGGRYTILETGDLKITD 276
              G+++VL C+V   P  EV   W  N             E  GG       GDL I +
Sbjct: 511 VTVGESIVLPCQVSHDPSIEVVFVWFFNGDIIDLKKGMAHFERIGGE----SVGDLMIRN 566

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSD 334
           +    SG+Y C  +  L +      + V+        PED +VE   S T + +  A  D
Sbjct: 567 IQLNHSGKYLCTVQTTLESLSAVADIIVRGPP---GPPEDVKVEEISSTTSQLSWRAGPD 623

Query: 335 PSLKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            +  + I  ++   P         + P  +    Y+ TV   S     ++   A   +  
Sbjct: 624 NNSPIQIFTIQTQTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGI 683

Query: 390 IEAQA-----TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ--- 441
            E             VP  AP N          + V++W  +  +   G   GY +    
Sbjct: 684 GEPSKPSELLRTKASVPAVAPVNVNGGGG-SRSELVITWESIPEELQNGEGFGYIIMFRP 742

Query: 442 ----TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
               TWT++          V + ES        +P S    +V  +N    G  S +   
Sbjct: 743 VGSTTWTKEKVASVESSRFVYRNES-------IIPLSPFEVKVGVYNNEGEGSLSTVTIV 795

Query: 498 VTPEGVP------GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKV 549
            + E  P       +VQS  A  +  S   + W    +  G ++GY++ Y     K + +
Sbjct: 796 YSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDSKESMI 852

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKN 604
           G +      +S   TT   + GL+ +T Y   +  Y  AG G  S  +        P + 
Sbjct: 853 GKI-----RVSGNVTTK-NITGLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQP 906

Query: 605 PDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           P N+  +  T + L ++W  +  +E+ +    Y+I +R++
Sbjct: 907 PANIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQN 945



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 136/380 (35%), Gaps = 44/380 (11%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK--HVEFSDQGSYT 103
           L   +V L C   G P P   W ++G  I+ +        G SL I   H +  D G Y 
Sbjct: 41  LSKSEVILKCAANGYPSPHYRWKQNGTDIDFTMSYHYRLDGGSLAISSPHTD-QDIGMYQ 99

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPEI----- 157
           C  +N +G   S    L       F T     ++  E + V   C     P P       
Sbjct: 100 CLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCG----PPPHFGDLSY 155

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY---------- 205
            W  N  P+     N RR V      + I  +  SD GNY C  TN              
Sbjct: 156 AWTFNDNPLYVQEDN-RRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPPTPL 214

Query: 206 ------VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKE 258
                 V  +    +    PE  +A KD       +V L C   G P P+++W   +   
Sbjct: 215 VQRTDGVMGEYEPKIEVRFPETIQAAKD------SSVKLECFALGNPVPDISWRRLDGSP 268

Query: 259 LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYE 318
           L G          L+I +    D G Y C A N  G     G L          + ++  
Sbjct: 269 LPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPPEWEQKIQNTY 328

Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQ 378
           +    +  ++C A   P+   +  WL+  E ++ E     +Q  + +L +T  +  DSG 
Sbjct: 329 LSIYDNLLWKCKASGKPNPWYT--WLKNGERLNPEER---IQIENGTLIITMLNVSDSGV 383

Query: 379 YTCRAQTELDFIEAQATLTV 398
           Y C A+ +   I A A L V
Sbjct: 384 YQCAAENKYQIIYANAELRV 403



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 106/286 (37%), Gaps = 32/286 (11%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L+ P FT EP    F     +  V  +C A+G P P   W  NG  I        R  G
Sbjct: 22  LLSRPIFTQEPHDVIFPLDLSKSEVILKCAANGYPSPHYRWKQNGTDIDFTMSYHYRLDG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            +          D G Y C ATN LG +         A+  +     +   +V +G+ VV
Sbjct: 82  GSLAISSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        W  N   L       R+   ETG+L I  V  +D G YTCF
Sbjct: 142 LLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCF 197

Query: 289 ARNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSL 337
             NK    + QG  +  V+    +  +         PE  +     S    C A+ +P  
Sbjct: 198 ITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            +S   L GS       + ++ +S    L +    + D G Y C A
Sbjct: 258 DISWRRLDGSP---LPGKVKYSKSQAI-LEIPNFQQEDEGFYECIA 299



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 14/190 (7%)

Query: 409 TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
           T +Q   A +  VSWN ++     G   GY+V  WT+   E  I ++ V+ G  TT  + 
Sbjct: 809 TSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVS-GNVTTKNIT 867

Query: 469 KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VK 526
                +  FA V A+N A  GP S  ++  T +  P    +  A  L +S   L W  VK
Sbjct: 868 GLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLTNSKLCLNWEHVK 927

Query: 527 PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGY 585
             +    ++GYKI Y+  + +K         +I +   TSA+L  L P    Y I +   
Sbjct: 928 TMENESEVLGYKILYRQNRQSKT--------HILETNNTSAEL--LVPFEEDYLIEIRTV 977

Query: 586 TKAGDGAESK 595
           +  GDG+ S+
Sbjct: 978 SDGGDGSSSE 987


>gi|344235922|gb|EGV92025.1| Contactin-4 [Cricetulus griseus]
          Length = 822

 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 121/394 (30%), Positives = 185/394 (46%), Gaps = 24/394 (6%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+P  +W + DG PI    R  + +    L I + +  D GSY 
Sbjct: 109 AEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSD--GILEIPNFQQEDAGSYE 166

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L   A P +  +   I+ A EE+V +ECKA+G P+P   W+ NG
Sbjct: 167 CVAENSRGKNIAKG-QLIFYAQPNWVQKINDIHVAMEESVFWECKANGRPKPTYRWLKNG 225

Query: 164 KPISQAPPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
            P+       R ++    G   ITI NL  SD G Y C A N  G ++    ++V+A +P
Sbjct: 226 DPLLT-----RDRIQIEQGTLNITIVNL--SDAGMYQCVAENKHGVIFSSAELSVIAESP 278

Query: 220 EITEAPKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITD 276
           + +       T+   G  V++ C+   +P+P   W   ++ L    R TI E G+L+I +
Sbjct: 279 DFSRTLLKRVTLVKVGGEVIIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIIN 338

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
           V  +D+G YTC A N  GTA  +G++ VK+ T +   P   +V  G+S    C    D S
Sbjct: 339 VTKSDAGSYTCIATNHFGTASSTGNVIVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHS 398

Query: 337 LKLSIVWLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           L +   W      IDF+ +         Q +   L +       +G+Y C  QT +D + 
Sbjct: 399 LDIVFTWSFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLT 458

Query: 392 AQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           A A L V+ P   P   T+ ++ D   A +SW P
Sbjct: 459 AAADLIVRGPPGPPEAVTIDEITDT-TAQLSWRP 491



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 179/698 (25%), Positives = 270/698 (38%), Gaps = 87/698 (12%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V+ PE + A
Sbjct: 50  NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPA 109

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
            +  TV  EC A G P P I W   +GKPI++     RR      + I N ++ D G+Y 
Sbjct: 110 EKGTTVKLECFALGNPVPTILWRRADGKPIAR---KARRHKSDGILEIPNFQQEDAGSYE 166

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P   +   D +    ++V   C+  G PKP   W+ N 
Sbjct: 167 CVAENSRGKNIAKGQLIFYAQ-PNWVQKINDIHVAMEESVFWECKANGRPKPTYRWLKNG 225

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
             L       +E G L IT V  +D+G Y C A NK G    S  L+V     I + P+ 
Sbjct: 226 DPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSV-----IAESPDF 280

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  +    W +G E I  E+E R   S D +L +
Sbjct: 281 SRTLLKRVTLVKVGGEVIIECKPKASP--RPVYTWRKGRE-ILRENE-RITISEDGNLRI 336

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
              ++ D+G YTC A        +   + V+ P +     + + V   +  V+       
Sbjct: 337 INVTKSDAGSYTCIATNHFGTASSTGNVIVKDPTKVMVPPSSMDVTVGESIVLPCQVTHD 396

Query: 429 QSL----RGHFRGYKVQTWTEKD------GEGSIRELIVNKGE---------STTTEVDK 469
            SL       F G+ +    + D      G+ S  +L++   +            T VDK
Sbjct: 397 HSLDIVFTWSFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDK 456

Query: 470 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPE 528
              A+    R         GPP    +    E    T Q S    P   S   +  ++  
Sbjct: 457 LTAAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQAR 507

Query: 529 QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
            P      + + +Q+V           +P + D  T +A + GL P  +Y          
Sbjct: 508 TP------FSVGWQAV---------STVPELVDGKTFTATVVGLNPWVEYEFRTVAANVI 552

Query: 589 GDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F Y + +R
Sbjct: 553 GIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFR 612

Query: 643 RHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
            H     W    +     S  V  N+    F P+E+K V+ W   D E + R+ I   G 
Sbjct: 613 PHGK-MIWMLTVLASADASRYVFRNESVRPFSPFEVK-VKYWRHDDKEENARK-IRTVGN 669

Query: 701 STTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
            T+T++     ++     V A+N A  GP S  ++  T
Sbjct: 670 QTSTKITNLKGSALYHLAVKAYNSAGTGPSSATVNVTT 707


>gi|402859564|ref|XP_003894224.1| PREDICTED: contactin-6 [Papio anubis]
          Length = 1045

 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 184/727 (25%), Positives = 303/727 (41%), Gaps = 100/727 (13%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    + S+      L I + +  D+G Y 
Sbjct: 255 AAKDSSVKLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQ--AILEIPNFQQEDEGFYE 312

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C  SN  G   +    L   A P +  + +    +  + + ++CKASG P P   W+ NG
Sbjct: 313 CIASNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDNLLWKCKASGKPNPWYTWLKNG 371

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++   P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 372 ERLN---PEERIQIDNGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSK 428

Query: 224 AP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
           +P  K+ +   G  +V+ C+    P+  ++W    + L    R  +LE G LKI +V  +
Sbjct: 429 SPVKKNSFVQVGGDIVIECKPNAFPRAAISWKRGTETLRQSKRMFLLEDGSLKIYNVTRS 488

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ GTA+ +GSL VKE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 489 DAGSYTCIATNQFGTAKNAGSLIVKERTVITVPPSKMDVTVGESIVLPCQVSHDPSIEVV 548

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            VW    + ID +       R    +   L +       SG+Y C  QT L+ + A A +
Sbjct: 549 FVWFFNGDIIDLKKGIAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADI 608

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW    P +     + + +QT T          ++
Sbjct: 609 IVRGPPGPPEDVK-VEEISSTTSQLSWR-AGPDN-NSPIQIFTIQTRTPFSVGWQAVATV 665

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQ-SL 510
            E++   G++    V    P  +   RV+A N    G PS+    + T   VP     ++
Sbjct: 666 PEIL--NGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVNI 723

Query: 511 EAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
                  S   + W  +  E  NG   GY + ++ V  T               T T  K
Sbjct: 724 NGGGGSRSELVITWESIPEELQNGEGFGYIVMFRPVGST---------------TWTKEK 768

Query: 569 LAGLE------------PSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS--- 613
           +A +E            P + + + +  Y   G+G+ S        ++   +  RG+   
Sbjct: 769 VASVESSRFVYRNESIIPLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQ 828

Query: 614 --TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
             + + + +SW A+                       AWN       R +  VL      
Sbjct: 829 SFSASEMEVSWNAI-----------------------AWN-------RNTGRVLG----- 853

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
             YE   V  WT+   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S
Sbjct: 854 --YE---VLYWTDDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGTGPSS 907

Query: 732 EIISFVT 738
             ++  T
Sbjct: 908 PPVNVTT 914



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 166/665 (24%), Positives = 256/665 (38%), Gaps = 97/665 (14%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC ++N   EA+      SV   P   V+                
Sbjct: 196 NLYIAKVEPSDVGNYTCFITNK--EAQR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 248

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ +V  EC A G P P+I W   +G P+   P   +       + I N ++
Sbjct: 249 FPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPL---PGKVKYSKSQAILEIPNFQQ 305

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A+N  G       + +    PE  +  ++ Y      ++  C+  G P P 
Sbjct: 306 EDEGFYECIASNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDNLLWKCKASGKPNPW 364

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L       ++ G L IT +  +DSG Y C A NK      +  L V     
Sbjct: 365 YTWLKNGERLNPEERIQIDNGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAP 424

Query: 309 HITDQP--EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P  ++  V+ G      C   + P  + +I W RG+E +      R     D SL
Sbjct: 425 DFSKSPVKKNSFVQVGGDIVIECKPNAFP--RAAISWKRGTETL--RQSKRMFLLEDGSL 480

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV------ 420
            +   +  D+G YTC A  +    +   +L V+         T+I V  +K  V      
Sbjct: 481 KIYNVTRSDAGSYTCIATNQFGTAKNAGSLIVK-------ERTVITVPPSKMDVTVGESI 533

Query: 421 -----VSWNPVSPQSLRGHFRGYKV----------QTWTEKDGEGSIRELIVNKGESTTT 465
                VS +P         F G  +          +   E  G+  IR + +N       
Sbjct: 534 VLPCQVSHDPSIEVVFVWFFNGDIIDLKKGIAHFERIGGESVGDLMIRNIQLNHSGKYLC 593

Query: 466 EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWV 525
            V   + +    A ++       GPP          G P  V+  E   + S+   L W 
Sbjct: 594 TVQTTLESLSAVADIIV-----RGPP----------GPPEDVKVEE---ISSTTSQLSWR 635

Query: 526 KPEQPNGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAG 584
                N  +  + I  Q+     VG   +  +P I +  T +A + GL P  +Y   +  
Sbjct: 636 AGPDNNSPIQIFTI--QTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVA 693

Query: 585 YTKAGDGAESK------YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
               G G  SK          VP   P N+ G G + + LVI+W ++PE   N   F Y 
Sbjct: 694 GNSIGIGEPSKPSELLRTKASVPAVAPVNINGGGGSRSELVITWESIPEELQNGEGFGYI 753

Query: 639 IFWRRHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-I 695
           + +R   +   W ++ V     S  V  N+      P+E+KV       +GEGS+  + I
Sbjct: 754 VMFRPVGS-TTWTKEKVASVESSRFVYRNESIIPLSPFEVKV--GVYNNEGEGSLSTVTI 810

Query: 696 VNKGE 700
           V  GE
Sbjct: 811 VYSGE 815



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 153/640 (23%), Positives = 245/640 (38%), Gaps = 83/640 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +NP +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 355 CKASGKPNPWYTWLKNGERLNPEERIQIDN--GTLIITMLNVSDSGVYQCAAENKY-QII 411

Query: 115 SYSIDLSVLA-APYFTVEP----EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
             + +L VLA AP F+  P     F+    +  +  ECK +  P   I W    + + Q+
Sbjct: 412 YANAELRVLASAPDFSKSPVKKNSFVQVGGD--IVIECKPNAFPRAAISWKRGTETLRQS 469

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
                 + G   + I N+ +SD G+Y C ATN  G   K+    ++     IT  P    
Sbjct: 470 KRMFLLEDG--SLKIYNVTRSDAGSYTCIATNQFGTA-KNAGSLIVKERTVITVPPSKMD 526

Query: 230 TVDGKTVVLTCRVFGAPKPEVN--WIHN-----------QKELTGGRYTILETGDLKITD 276
              G+++VL C+V   P  EV   W  N             E  GG       GDL I +
Sbjct: 527 VTVGESIVLPCQVSHDPSIEVVFVWFFNGDIIDLKKGIAHFERIGGE----SVGDLMIRN 582

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSD 334
           +    SG+Y C  +  L +      + V+        PED +VE   S T + +  A  D
Sbjct: 583 IQLNHSGKYLCTVQTTLESLSAVADIIVRGPP---GPPEDVKVEEISSTTSQLSWRAGPD 639

Query: 335 PSLKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            +  + I  ++   P         + P  +    Y+ TV   S     ++   A   +  
Sbjct: 640 NNSPIQIFTIQTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGI 699

Query: 390 IEAQA-----TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ--- 441
            E             VP  AP N          + V++W  +  +   G   GY V    
Sbjct: 700 GEPSKPSELLRTKASVPAVAPVNINGGGG-SRSELVITWESIPEELQNGEGFGYIVMFRP 758

Query: 442 ----TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
               TWT++          V + ES        +P S    +V  +N    G  S +   
Sbjct: 759 VGSTTWTKEKVASVESSRFVYRNES-------IIPLSPFEVKVGVYNNEGEGSLSTVTIV 811

Query: 498 VTPEGVP------GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKV 549
            + E  P       +VQS  A  +  S   + W    +  G ++GY++ Y     K + +
Sbjct: 812 YSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDSKESMI 868

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKN 604
           G +      +S   TT   + GL+ +T Y   +  Y  AG G  S  +        P + 
Sbjct: 869 GKI-----RVSGNVTTK-NITGLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQP 922

Query: 605 PDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           P N+  +  T + L ++W  +  +E+ +    Y+I +R++
Sbjct: 923 PANIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQN 961



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 137/380 (36%), Gaps = 44/380 (11%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK--HVEFSDQGSYT 103
           L   +V L C   G P P   W ++G  I+ +        G SL I   H +  D G Y 
Sbjct: 57  LSKSEVILKCAANGYPSPHYRWKQNGTDIDFTMSYHYRLDGGSLAISSPHTD-QDIGMYQ 115

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPEI----- 157
           C  +N +G   S    L       F T     ++  E + V   C     P P       
Sbjct: 116 CLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCG----PPPHFGDLSY 171

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY---------- 205
            W  N  P+     N RR V      + I  +  SD GNY C  TN              
Sbjct: 172 AWTFNDNPLYVQEDN-RRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPPTPL 230

Query: 206 ------VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKE 258
                 V  +    +    PE  +A KD       +V L C   G P P+++W   +   
Sbjct: 231 VQRTDGVMGEYEPKIEVRFPETIQAAKD------SSVKLECFALGNPVPDISWRRLDGSP 284

Query: 259 LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYE 318
           L G          L+I +    D G Y C A N  G     G L          + ++  
Sbjct: 285 LPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPPEWEQKIQNTY 344

Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQ 378
           +    +  ++C A   P+   +  WL+  E ++ E     +Q ++ +L +T  +  DSG 
Sbjct: 345 LSIYDNLLWKCKASGKPNPWYT--WLKNGERLNPEER---IQIDNGTLIITMLNVSDSGV 399

Query: 379 YTCRAQTELDFIEAQATLTV 398
           Y C A+ +   I A A L V
Sbjct: 400 YQCAAENKYQIIYANAELRV 419



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 106/286 (37%), Gaps = 32/286 (11%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L+ P FT EP    F     +  V  +C A+G P P   W  NG  I        R  G
Sbjct: 38  LLSRPIFTQEPHDVIFPLDLSKSEVILKCAANGYPSPHYRWKQNGTDIDFTMSYHYRLDG 97

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            +          D G Y C ATN LG +         A+  +     +   +V +G+ VV
Sbjct: 98  GSLAISSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVV 157

Query: 238 LTCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        W  N   L       R+   ETG+L I  V  +D G YTCF
Sbjct: 158 LLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCF 213

Query: 289 ARNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSL 337
             NK    + QG  +  V+    +  +         PE  +     S    C A+ +P  
Sbjct: 214 ITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVP 273

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            +S   L GS       + ++ +S    L +    + D G Y C A
Sbjct: 274 DISWRRLDGSP---LPGKVKYSKSQAI-LEIPNFQQEDEGFYECIA 315



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 14/190 (7%)

Query: 409  TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
            T +Q   A +  VSWN ++     G   GY+V  WT+   E  I ++ V+ G  TT  + 
Sbjct: 825  TSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVS-GNVTTKNIT 883

Query: 469  KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VK 526
                 +  FA V A+N A  GP S  ++  T +  P    +  A  L +S   L W  VK
Sbjct: 884  GLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLTNSKLCLNWEHVK 943

Query: 527  PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGY 585
              +    ++GYKI Y+  + +K         +I +   TSA+L  L P    Y I +   
Sbjct: 944  TMENESEVLGYKILYRQNRQSKT--------HILETNNTSAEL--LVPFEEDYLIEIRTV 993

Query: 586  TKAGDGAESK 595
            +  GDG+ S+
Sbjct: 994  SDGGDGSSSE 1003


>gi|363738787|ref|XP_414433.3| PREDICTED: contactin-3 [Gallus gallus]
          Length = 910

 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 185/387 (47%), Gaps = 15/387 (3%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P     ++ + N    + I + +  D G Y 
Sbjct: 121 AAKGSTVKLECFALGNPVPQINWRRTDGMPFPSKIKLRKSN--GMIEIPNFQQEDAGLYE 178

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    +    A E+T+ ++C+ASG P+P   W+ NG
Sbjct: 179 CITENSRGKNIARG-RLTYYAKPHWIQMIKDTEIAVEDTLYWDCRASGKPKPSYRWLKNG 237

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + +S      R ++    +TI +L  +D+G Y C A N  G +Y    + V+A AP+ ++
Sbjct: 238 EQLSV---EGRIQIENGALTISSLNLTDSGRYQCIAENKHGVIYSSAELRVVASAPDFSK 294

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
            P  +      G TV   C+   +PK   +W    ++L    R T+L+ G L+IT+V   
Sbjct: 295 NPMKKMIQVQIGSTVDFECKPKASPKARCSWKKGGEQLHENERITLLKDGGLRITNVTKV 354

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ GTA G+ +L V E T I   P + +V  G+S    C    DP L +S
Sbjct: 355 DAGSYTCVATNQFGTASGTTNLVVTEPTRIILAPSNMDVTVGESVILPCQVQHDPILDIS 414

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S    L +       SG+Y C  +TE+D + + A L
Sbjct: 415 FTWYFNGTLTDFKKDASHFEKVGGSASGDLMIRNIQLKHSGKYVCMVKTEVDSVASAADL 474

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW 423
            V+     P +  + ++ D   A +SW
Sbjct: 475 IVRGSPGPPEHVRVDEITDT-TAQISW 500



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 165/638 (25%), Positives = 250/638 (39%), Gaps = 88/638 (13%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V  ++       ++           P   V+ PE + AA
Sbjct: 63  LYIAKVEPSDVGNYTCVVTSTVTNSQVLGSPTPLVLRTDGVMGEYEPKIEVQFPETLPAA 122

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P    P   + +     I I N ++ D G Y C
Sbjct: 123 KGSTVKLECFALGNPVPQINWRRTDGMPF---PSKIKLRKSNGMIEIPNFQQEDAGLYEC 179

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
              NS G   K++    L +   P   +  KD       T+   CR  G PKP   W+ N
Sbjct: 180 ITENSRG---KNIARGRLTYYAKPHWIQMIKDTEIAVEDTLYWDCRASGKPKPSYRWLKN 236

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
            ++L+      +E G L I+ +   DSG Y C A NK G    S  L  V      +  P
Sbjct: 237 GEQLSVEGRIQIENGALTISSLNLTDSGRYQCIAENKHGVIYSSAELRVVASAPDFSKNP 296

Query: 315 --EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
             +  +V+ G +  F C   + P  + S  W +G E +  E+E R     D  L +T  +
Sbjct: 297 MKKMIQVQIGSTVDFECKPKASPKARCS--WKKGGEQL-HENE-RITLLKDGGLRITNVT 352

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAV----VSWNP 425
           ++D+G YTC A  +         L V  P   + APSN   + V   +  +    V  +P
Sbjct: 353 KVDAGSYTCVATNQFGTASGTTNLVVTEPTRIILAPSN---MDVTVGESVILPCQVQHDP 409

Query: 426 VSPQSLRGHFRGY-----KVQTWTEKDGEGSIRELIVNKGE---------STTTEVDKFV 471
           +   S   +F G      K  +  EK G  +  +L++   +            TEVD   
Sbjct: 410 ILDISFTWYFNGTLTDFKKDASHFEKVGGSASGDLMIRNIQLKHSGKYVCMVKTEVDSVA 469

Query: 472 PASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPN 531
            A+    R                      G PG  + +    +  +   + W +    +
Sbjct: 470 SAADLIVR----------------------GSPGPPEHVRVDEITDTTAQISWQEGTDNH 507

Query: 532 GVLMGYKIKYQ---SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
             +  Y I+ +   SV   +V      +P + D  T +  +  L P  +Y   +    K 
Sbjct: 508 SPVTAYTIQARTPFSVGWQRV----TTVPDVIDGNTFTTTVVDLNPWVEYEFRVVASNKI 563

Query: 589 GDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G G  S      +    VP   P  V G G + + LVI+W  +PE   N   F Y + +R
Sbjct: 564 GGGEPSLPSEKVRTEEAVPEIPPAEVSGGGGSRSELVITWDPIPEELQNGEGFGYVVAFR 623

Query: 643 RHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
              T   W Q  V        V  N+    F PYE+KV
Sbjct: 624 PFGT-TTWIQTVVTSPDTPRYVFRNESILPFSPYEVKV 660



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 163/688 (23%), Positives = 275/688 (39%), Gaps = 82/688 (11%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  ++   RI   N   +L I  +  +D G Y C   N  G   
Sbjct: 221 CRASGKPKPSYRWLKNGEQLSVEGRIQIEN--GALTISSLNLTDSGRYQCIAENKHGVIY 278

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           S S +L V+A AP F+  P  + I      TV FECK    P+    W   G+ + +   
Sbjct: 279 S-SAELRVVASAPDFSKNPMKKMIQVQIGSTVDFECKPKASPKARCSWKKGGEQLHENER 337

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
               K G  RIT  N+ K D G+Y C ATN  G       + V+     I  AP +    
Sbjct: 338 ITLLKDGGLRIT--NVTKVDAGSYTCVATNQFGTASGTTNL-VVTEPTRIILAPSNMDVT 394

Query: 232 DGKTVVLTCRVFGAPKPEVN--WIHN-----------QKELTGGRYTILETGDLKITDVA 278
            G++V+L C+V   P  +++  W  N             E  GG      +GDL I ++ 
Sbjct: 395 VGESVILPCQVQHDPILDISFTWYFNGTLTDFKKDASHFEKVGGS----ASGDLMIRNIQ 450

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVK------EHTHITDQPEDYEVEAGQSATFRCNAV 332
              SG+Y C  + ++ +   +  L V+      EH  + +  +     + Q  T   + V
Sbjct: 451 LKHSGKYVCMVKTEVDSVASAADLIVRGSPGPPEHVRVDEITDTTAQISWQEGTDNHSPV 510

Query: 333 SDPSLK----LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           +  +++     S+ W R        + P  +  N ++ TV   +     ++   A  ++ 
Sbjct: 511 TAYTIQARTPFSVGWQR------VTTVPDVIDGNTFTTTVVDLNPWVEYEFRVVASNKIG 564

Query: 389 FIE----AQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH-------FRG 437
             E    ++   T +   E P            + V++W+P+  +   G        FR 
Sbjct: 565 GGEPSLPSEKVRTEEAVPEIPPAEVSGGGGSRSELVITWDPIPEELQNGEGFGYVVAFRP 624

Query: 438 YKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
           +   TW +           V + ES        +P S    +V  +N    GP S I + 
Sbjct: 625 FGTTTWIQTVVTSPDTPRYVFRNES-------ILPFSPYEVKVGVYNNKGEGPFSSITTV 677

Query: 498 VTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLE 554
            + E  P      +    L SS   + W  +  +  +G L+GY+++Y +  G +      
Sbjct: 678 FSAEEEPTVAPSGVSVTSLSSSVIEVSWKAIPWKMSSGRLLGYEVRYWNNGGKEESS--N 735

Query: 555 RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVE 609
           R+    +   TS ++ GL+ +  Y   +  Y  AG G  S  +        P + P NV 
Sbjct: 736 RVKAAGN--ETSIRITGLKSNLAYYTAVRAYNSAGAGPFSATVNATTKKTPPSQPPGNVV 793

Query: 610 GRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVL--DWRQSELVLAN 667
               T + ++++W  +  +E+ +    Y++ +R   +G+  N  +VL  D   +EL+L  
Sbjct: 794 WN-VTDSRVILNWEEVRAMENESEVTGYKVLYR--TSGQ--NNMNVLNTDKTTAELLL-- 846

Query: 668 QPTFQPYEIKVVQTWTEKDGEGSIRELI 695
            P  + Y I+V  T    DG  S + LI
Sbjct: 847 -PFNEDYIIEVKATTEGGDGTSSDQILI 873


>gi|431901434|gb|ELK08460.1| Contactin-1 [Pteropus alecto]
          Length = 1125

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 185/728 (25%), Positives = 292/728 (40%), Gaps = 90/728 (12%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 189 PADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 246

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G+Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 247 NIQLEDEGTYECEAENIRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 302

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 303 TGKPIPTIRWLKNGYSYHKG------ELRLYDVTFEN-----AGMYQCIAENTYGAIYAN 351

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L  G R  I
Sbjct: 352 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNGSRTLI 411

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 412 WEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENAT 471

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN-----DYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ +W      IDF  E    Q N     +  L +  +    +G+YTC
Sbjct: 472 MQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDANGELLIRNAQLKHAGRYTC 531

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            AQT +D   A A L V+ P   P     I+ I A    ++W+  S          Y +Q
Sbjct: 532 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYNIQ 588

Query: 442 TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           T T    D + +  +  + +G          +P  +   RV+A N    G PS   + + 
Sbjct: 589 TKTLLSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIK 648

Query: 500 PEGVPGTVQSLEAIPLGSS--AFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
            +G    V   +    G S     + W  +  E   G   GY + ++   G +   +   
Sbjct: 649 TDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVT 708

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEG 610
            P   D      K   + P T +++ +  +   GDG  S           P + P  V  
Sbjct: 709 NP---DIGRYVHKDETMRPFTAFQVKVKAFNNKGDGPYSLTAVINSAQDAPSEAPTGVGV 765

Query: 611 RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT 670
           +  + + + + W      EH                                     +  
Sbjct: 766 KVLSSSEISVHW------EH-----------------------------------VVEKV 784

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
            + Y+I+    W+  D E +   + VN  E  +  ++  +P ++    V A N A  GPP
Sbjct: 785 VESYQIRY---WSVHDKEAAAHRVQVNSQE-YSARLENLLPDTQYSVEVRACNSAGCGPP 840

Query: 731 SEIISFVT 738
           SE+I   T
Sbjct: 841 SEMIETFT 848



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 155/656 (23%), Positives = 246/656 (37%), Gaps = 83/656 (12%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 137 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTKPYPADIVV 194

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  I A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 195 QFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 251

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N  G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 252 DEGTYECEAENIRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 310

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 311 RWLKN-----GYSY---HKGELRLYDVTFENAGMYQCIAENTYGAIYANAELKILALAPT 362

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   D SL 
Sbjct: 363 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNGS--RTLIWEDGSLE 418

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC A+       +  TL +  P   + AP N  +    +A  +   S+
Sbjct: 419 INNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASF 478

Query: 424 NPVSPQSLRGHFRGYKVQTWTEK-----------DGEGSIRELIVNKGESTTTEVDKFVP 472
           +P    +    F GY +    E            +GE  IR   +      T      V 
Sbjct: 479 DPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVD 538

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
            S   A ++                    G PG    L    + +++  L W +    + 
Sbjct: 539 NSSASADLVV------------------RGPPGPPGGLRIEDIRATSVALTWSRGSDNHS 580

Query: 533 VLMGYKIKYQSV-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
            +  Y I+ +++     K  K  P     P I +    +A+   L P  +Y   +     
Sbjct: 581 PISKYNIQTKTLLSDDWKDAKTDP-----PII-EGNMEAARAVDLIPWMEYEFRVVATNT 634

Query: 588 AGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            G G  S      K     P   P +V G G +   L I+W  +    H   +F Y + +
Sbjct: 635 LGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNNFGYIVAF 694

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELI 695
           +  + GE W +  V +      V  ++    F  +++KV     + DG  S+  +I
Sbjct: 695 KPFD-GEEWKKVTVTNPDIGRYVHKDETMRPFTAFQVKVKAFNNKGDGPYSLTAVI 749



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 134/357 (37%), Gaps = 48/357 (13%)

Query: 66  IWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVSNGVGEAKSYSIDLSV- 122
           IW  +   I+  SDR S    G +L+I + +   D G Y C  SN  G  +S    LS  
Sbjct: 24  IWRMNNGDIDLTSDRYSM--VGGNLVINNPDKQKDAGVYYCLASNNYGIVRSTEATLSFG 81

Query: 123 LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--------WVHNGKPISQAPPNPR 174
              P+   E   +   E + +   C      +P  H        W+ N  P+     + R
Sbjct: 82  YLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYRWLLNEFPVF-ITMDKR 134

Query: 175 RKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAPEITEAP----- 225
           R V      + I N+  SD GNY C  ++    + K V+     L   PE T  P     
Sbjct: 135 RFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIPLIPLPERTTKPYPADI 192

Query: 226 ----KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
               KD Y + G+ V L C   G P P++ W    + +            LKI ++   D
Sbjct: 193 VVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLED 252

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G Y C A N  G  +    + V+      +   D EV+ G    + C A   P    +I
Sbjct: 253 EGTYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPI--PTI 310

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
            WL+       + E R      Y +T       ++G Y C A+     I A A L +
Sbjct: 311 RWLKNGYSY-HKGELRL-----YDVTFE-----NAGMYQCIAENTYGAIYANAELKI 356



 Score = 44.3 bits (103), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 92/240 (38%), Gaps = 22/240 (9%)

Query: 177 VGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKT 235
           VG N +     ++ D G Y C A+N+ G V          +        + E  V +GK 
Sbjct: 42  VGGNLVINNPDKQKDAGVYYCLASNNYGIVRSTEATLSFGYLDPFPPEERPEVRVKEGKG 101

Query: 236 VVLTCRV-FGAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFA 289
           +VL C   +  P      W+ N+      +   R+     G+L I +V  +D G Y+CF 
Sbjct: 102 MVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFV 161

Query: 290 RNKLGTAQGSGSL---------TVKEH-THITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
            +   T                T K +   I  Q +D     GQ+ T  C A+ +P    
Sbjct: 162 SSPSITKSVFSKFIPLIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPV--P 219

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            I W +  EP+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 220 DIRWRKVLEPMPSTAE---ISTSGAVLKIFNIQLEDEGTYECEAENIRGKDKHQARIYVQ 276



 Score = 41.6 bits (96), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+    ++V+ + +  V W  V  + +      Y+++ W+  D E +   + VN  
Sbjct: 756 PSEAPTGVG-VKVLSSSEISVHWEHVVEKVVES----YQIRYWSVHDKEAAAHRVQVNSQ 810

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++    V A N A  GPPSE+I   T +  P     + +     S +
Sbjct: 811 E-YSARLENLLPDTQYSVEVRACNSAGCGPPSEMIETFTKKAPPSQPPKITSSVRSGSRY 869

Query: 521 YLKW 524
            + W
Sbjct: 870 IITW 873


>gi|297670836|ref|XP_002813560.1| PREDICTED: LOW QUALITY PROTEIN: neural cell adhesion molecule
           L1-like protein-like [Pongo abelii]
          Length = 1225

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 178/713 (24%), Positives = 298/713 (41%), Gaps = 68/713 (9%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+ + + L C   G P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C 
Sbjct: 269 LKEETLLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYGKTLKIENVSYQDKGNYRCT 327

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG P
Sbjct: 328 ASNFLGTA-THDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 386

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEA 224
           I    P     V P  I+  NL+ + T  Y C A+N  G +  +  ++V+   P I TE 
Sbjct: 387 IDNH-PFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQTED 445

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            ++  TV G +  L C  F +P+  V+W  +   K L G +Y I E G L+I      D+
Sbjct: 446 GENYATVVGYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRQYHIYENGTLQINRTTEEDA 505

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L 
Sbjct: 506 GSYSCWVENAIGKTAVTANLDIRNATKLRVSPKNPRIPKLHMLELHCESKCDSHLKNSLK 565

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G Y C A T LD       +TV 
Sbjct: 566 LSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVL 625

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +  +   +   Y V+    K+  G   EL   +
Sbjct: 626 DVPDPPENLHLSERQN-RSVRLTWEAGADHN--SNISEYIVEFEGNKEEPGRWEELTRVQ 682

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  +    P      RV+A N      PS+      TP   P    Q++       
Sbjct: 683 GKKTTV-ILPLAPFVSYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 741

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
               +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+
Sbjct: 742 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 792

Query: 576 T--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
               Y + +    + G G + + +  Y     PD    + G     + LV ++W+ +P+ 
Sbjct: 793 VYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKD 852

Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
             +     Y+I W        W    +LD R             P E+ +++        
Sbjct: 853 RVHGRLKGYQINW--------WKTKSLLDGRT-----------HPKEVNILRF------- 886

Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                     G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 887 ---------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTPEG 930



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 142/651 (21%), Positives = 252/651 (38%), Gaps = 77/651 (11%)

Query: 54  FCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113
           +C F   P  +TI  K  +P+              L +  ++ ++  S + E+ +     
Sbjct: 202 YCCFAAFPRLRTIVQK--MPMK-------------LTVNSLKHANDSSSSTEIGSKANSI 246

Query: 114 KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           K     L  L  P  +     I   +EET+  EC A GLP P++ W   G  + +     
Sbjct: 247 KQRKPKL--LLPPTESGSESSITILKEETLLLECFAEGLPTPQVDWNKIGGDLPKG---- 300

Query: 174 RRKVGPN---RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
            R+   N    + IEN+   D GNY C A+N LG    D +V ++   P  T+ P+    
Sbjct: 301 -RETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHV-IVEEPPRWTKKPQSAVY 358

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCF 288
             G   +L C   G P+P + W  N   +    +   ++   ++  T++    +  Y C 
Sbjct: 359 STGSNGILLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTAVYQCE 418

Query: 289 ARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           A N  GT   + ++ V +   +  T+  E+Y    G SA   C   + P   +S  W + 
Sbjct: 419 ASNVHGTILANANIDVVDVRPLIQTEDGENYATVVGYSAFLHCEFFASPEAVVS--WQKV 476

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPS 406
            E    E     +  N  +L + +++E D+G Y+C  +  +      A L ++       
Sbjct: 477 EEVKPLEGRQYHIYENG-TLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR------- 528

Query: 407 NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGES---T 463
                   +A K  VS  P +P+  + H      ++  +   + S++      GE+    
Sbjct: 529 --------NATKLRVS--PKNPRIPKLHMLELHCESKCDSHLKNSLKLSWSKDGEAFEIN 578

Query: 464 TTEVDKFVPASKNFA---RVLAFNGAYNGPP------SEIISFVTPEGVPGTVQSLEAIP 514
            TE  + +    N       L   G Y          +  I+ VT   VP   ++L    
Sbjct: 579 GTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSE 638

Query: 515 LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLE 573
             + +  L W      N  +  Y ++++   G K  P   E L  +    TT   +  L 
Sbjct: 639 RQNRSVRLTWEAGADHNSNISEYIVEFE---GNKEEPGRWEELTRVQGKKTTV--ILPLA 693

Query: 574 PSTKYRIHLAGYTKAGDGAESKYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPE 627
           P   Y+  +    + G    S+   +       P +NP N+  + S P  ++I W  +  
Sbjct: 694 PFVSYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKS 753

Query: 628 IEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           +E N P  +YR+ W+       W ++ V +     L +     + PY++KV
Sbjct: 754 MEQNGPGLEYRVTWKPQGAPVEWEEETVTN---HTLRVMTPAVYAPYDVKV 801



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 128/539 (23%), Positives = 223/539 (41%), Gaps = 49/539 (9%)

Query: 88   SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
            +L I      D GSY+C V N +G+  + + +L +  A    V P+     +   +   C
Sbjct: 494  TLQINRTTEEDAGSYSCWVENAIGKT-AVTANLDIRNATKLRVSPKNPRIPKLHMLELHC 552

Query: 148  KA---SGLPEP-EIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202
            ++   S L    ++ W  +G+        + R  +    +TI N+   D G Y C+A  +
Sbjct: 553  ESKCDSHLKNSLKLSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTA 612

Query: 203  LGYVYKDVYVNVLAHAPEITEAPKDEYTVD--GKTVVLTCRVFGAPKPE------VNWIH 254
            L        V VL    ++ + P++ +  +   ++V LT    GA          V +  
Sbjct: 613  LDSAADITQVTVL----DVPDPPENLHLSERQNRSVRLTWEA-GADHNSNISEYIVEFEG 667

Query: 255  NQKELTGGRYTILETGDLKITDVAFA----DSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            N++E   GR+  L     K T V        S ++   A N++G +Q S      E    
Sbjct: 668  NKEE--PGRWEELTRVQGKKTTVILPLAPFVSYQFRVIAVNEVGRSQPSQPSDHHETPPA 725

Query: 311  T--DQPEDYEVEAGQSAT-------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS 361
                 P++  V+A Q           +    + P L+  + W     P+++E E      
Sbjct: 726  APDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TV 781

Query: 362  NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKK 418
             +++L V   +         +A  +L       ++T+    + P    +I    VI++  
Sbjct: 782  TNHTLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTL 841

Query: 419  AVVSWNPVSPQSLRGHFRGYKVQTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPA 473
              V+W+ +    + G  +GY++  W  K   DG    +E+ + +  G+  +  V      
Sbjct: 842  VKVTWSTIPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAF 901

Query: 474  SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV 533
            S+    VLA+N    GP SE   F TPEGVP     L+ I +      L W  P++ NG 
Sbjct: 902  SEFHLTVLAYNSKGAGPESEPYIFQTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGN 961

Query: 534  LMGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            L GY ++YQ +  T ++G L +    I+ P+  S  L+ L  +TKY+ +L   T  G G
Sbjct: 962  LTGYLLQYQIINDTYEIGELNDI--NITTPSKPSWHLSNLSATTKYKFYLRACTSQGCG 1018



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 109/430 (25%), Positives = 171/430 (39%), Gaps = 62/430 (14%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P   W+KDG P   +D   I+  N G   I      S  QG Y C  SN
Sbjct: 54  QIECEAKGNPEPTFSWTKDGNPFYFTDHRIITSNNSGTFRIPNEGHISHFQGKYRCFASN 113

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKP 165
            +G A S  I+  V + P F  E  + +   E + +   C    GLP   I+W++   + 
Sbjct: 114 KLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEH 173

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA- 218
           I Q       + G   +   N+ + D+ N Y C A        +  +   + VN L HA 
Sbjct: 174 IEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHAN 231

Query: 219 -------------------PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWI 253
                              P++   P +  +      +  +T++L C   G P P+V+W 
Sbjct: 232 DSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKEETLLLECFAEGLPTPQVDWN 291

Query: 254 HNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD 312
               +L  GR T    G  LKI +V++ D G Y C A N LGTA     + V+E    T 
Sbjct: 292 KIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTK 351

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID---------FESEPRF--VQS 361
           +P+      G +    C A  +P  + +I W     PID         F  E  F  +Q 
Sbjct: 352 KPQSAVYSTGSNGILLCEAEGEP--QPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQP 409

Query: 362 NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDA 416
           N  ++   ++S +     T  A   +D ++ +  +  +       +   S F   +   +
Sbjct: 410 NHTAVYQCEASNVHG---TILANANIDVVDVRPLIQTEDGENYATVVGYSAFLHCEFFAS 466

Query: 417 KKAVVSWNPV 426
            +AVVSW  V
Sbjct: 467 PEAVVSWQKV 476


>gi|355746564|gb|EHH51178.1| Neural recognition molecule NB-3 [Macaca fascicularis]
          Length = 1029

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 188/727 (25%), Positives = 309/727 (42%), Gaps = 100/727 (13%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    + S+      L I + +  D+G Y 
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGRPLPGKVKYSKSQ--AILEIPNFQQEDEGFYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C  SN  G   +    L   A P +  + +    +  + + ++CKASG P P   W+ NG
Sbjct: 297 CIASNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDNLLWKCKASGKPNPWYTWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++   P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 356 ERLN---PEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSK 412

Query: 224 AP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
           +P  K+ +   G  +V+ C+    P+  ++W    + L    R  +LE G LKI +V  +
Sbjct: 413 SPVKKNSFVQVGGDIVIECKPNAFPRAAISWKRGTETLRQSKRMFLLEDGSLKIYNVTRS 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ GTA+ +GSL VKE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 473 DAGSYTCIATNQFGTAKNAGSLIVKERTVITVPPSKMDVTVGESIVLPCQVSHDPSIEVV 532

Query: 341 IVWLRGSEPIDF-ESEPRFVQSNDYSL--TVTKSSELD-SGQYTCRAQTELDFIEAQATL 396
            VW    + ID  +    F +    S+   + ++ +L+ SG+Y C  QT L+ + A A +
Sbjct: 533 FVWFFNGDIIDLKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADI 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW    P +     + + +QT T          ++
Sbjct: 593 IVRGPPGPPEDVK-VEEISSTTSQLSWR-AGPDN-NSPIQIFTIQTQTPFSVGWQAVATV 649

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLE 511
            E++   G++    V    P  +   RV+A N    G PS+    + T   VP       
Sbjct: 650 PEIL--NGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVNV 707

Query: 512 AIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
               GS S   + W  +  E  NG   GY I ++ V  T               T T  K
Sbjct: 708 NGGGGSRSELVITWESIPEELQNGEGFGYIIMFRPVGST---------------TWTKEK 752

Query: 569 LAGLE------------PSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS--- 613
           +A +E            P + + + +  Y   G+G+ S        ++   +  RG+   
Sbjct: 753 VASVESSRFVYRNESIIPLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQ 812

Query: 614 --TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
             + + + +SW A+                       AWN       R +  VL      
Sbjct: 813 SFSASEMEVSWNAI-----------------------AWN-------RNTGRVLG----- 837

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
             YE   V  WT+   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S
Sbjct: 838 --YE---VLYWTDDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGTGPSS 891

Query: 732 EIISFVT 738
             ++  T
Sbjct: 892 PPVNVTT 898



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 165/660 (25%), Positives = 261/660 (39%), Gaps = 87/660 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC ++N   EA+      SV   P   V+                
Sbjct: 180 NLYIAKVEPSDVGNYTCFITNK--EAQR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 232

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ +V  EC A G P P+I W   +G+P+   P   +       + I N ++
Sbjct: 233 FPETIQAAKDSSVKLECFALGNPVPDISWRRLDGRPL---PGKVKYSKSQAILEIPNFQQ 289

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A+N  G       + +    PE  +  ++ Y      ++  C+  G P P 
Sbjct: 290 EDEGFYECIASNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDNLLWKCKASGKPNPW 348

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L       +E G L IT +  +DSG Y C A NK      +  L V     
Sbjct: 349 YTWLKNGERLNPEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAP 408

Query: 309 HITDQP--EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P  ++  V+ G      C   + P  + +I W RG+E +      R     D SL
Sbjct: 409 DFSKSPVKKNSFVQVGGDIVIECKPNAFP--RAAISWKRGTETL--RQSKRMFLLEDGSL 464

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV------ 420
            +   +  D+G YTC A  +    +   +L V+         T+I V  +K  V      
Sbjct: 465 KIYNVTRSDAGSYTCIATNQFGTAKNAGSLIVK-------ERTVITVPPSKMDVTVGESI 517

Query: 421 -----VSWNPVSPQSLRGHFRG-----YKVQTWTEKDGEGSIRELIVNKGESTTTEVDKF 470
                VS +P         F G      K     E+ G  S+ +L++   +   +   K+
Sbjct: 518 VLPCQVSHDPSIEVVFVWFFNGDIIDLKKGMAHFERIGGESVGDLMIRNIQLNHS--GKY 575

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
           +   +     L+            ++ +   G PG  + ++   + S+   L W      
Sbjct: 576 LCTVQTTLESLS-----------AVADIIVRGPPGPPEDVKVEEISSTTSQLSWRAGPDN 624

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           N  +  + I+ Q+     VG   +  +P I +  T +A + GL P  +Y   +      G
Sbjct: 625 NSPIQIFTIQTQT--PFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIG 682

Query: 590 DGAESK------YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  SK          VP   P NV G G + + LVI+W ++PE   N   F Y I +R 
Sbjct: 683 IGEPSKPSELLRTKASVPAVAPVNVNGGGGSRSELVITWESIPEELQNGEGFGYIIMFRP 742

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
             +   W ++ V     S  V  N+      P+E+KV       +GEGS+  + IV  GE
Sbjct: 743 VGS-TTWTKEKVASVESSRFVYRNESIIPLSPFEVKV--GVYNNEGEGSLSTVTIVYSGE 799



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 152/640 (23%), Positives = 245/640 (38%), Gaps = 83/640 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +NP +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 339 CKASGKPNPWYTWLKNGERLNPEERIQIEN--GTLIITMLNVSDSGVYQCAAENKY-QII 395

Query: 115 SYSIDLSVLA-APYFTVEP----EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
             + +L VLA AP F+  P     F+    +  +  ECK +  P   I W    + + Q+
Sbjct: 396 YANAELRVLASAPDFSKSPVKKNSFVQVGGD--IVIECKPNAFPRAAISWKRGTETLRQS 453

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
                 + G   + I N+ +SD G+Y C ATN  G   K+    ++     IT  P    
Sbjct: 454 KRMFLLEDG--SLKIYNVTRSDAGSYTCIATNQFGTA-KNAGSLIVKERTVITVPPSKMD 510

Query: 230 TVDGKTVVLTCRVFGAPKPEVN--WIHN-----------QKELTGGRYTILETGDLKITD 276
              G+++VL C+V   P  EV   W  N             E  GG       GDL I +
Sbjct: 511 VTVGESIVLPCQVSHDPSIEVVFVWFFNGDIIDLKKGMAHFERIGGE----SVGDLMIRN 566

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSD 334
           +    SG+Y C  +  L +      + V+        PED +VE   S T + +  A  D
Sbjct: 567 IQLNHSGKYLCTVQTTLESLSAVADIIVRGPP---GPPEDVKVEEISSTTSQLSWRAGPD 623

Query: 335 PSLKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            +  + I  ++   P         + P  +    Y+ TV   S     ++   A   +  
Sbjct: 624 NNSPIQIFTIQTQTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGI 683

Query: 390 IEAQA-----TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ--- 441
            E             VP  AP N          + V++W  +  +   G   GY +    
Sbjct: 684 GEPSKPSELLRTKASVPAVAPVNVNGGGG-SRSELVITWESIPEELQNGEGFGYIIMFRP 742

Query: 442 ----TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
               TWT++          V + ES        +P S    +V  +N    G  S +   
Sbjct: 743 VGSTTWTKEKVASVESSRFVYRNES-------IIPLSPFEVKVGVYNNEGEGSLSTVTIV 795

Query: 498 VTPEGVP------GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKV 549
            + E  P       +VQS  A  +  S   + W    +  G ++GY++ Y     K + +
Sbjct: 796 YSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDSKESMI 852

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKN 604
           G +      +S   TT   + GL+ +T Y   +  Y  AG G  S  +        P + 
Sbjct: 853 GKI-----RVSGNVTTK-NITGLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQP 906

Query: 605 PDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           P N+  +  T + L ++W  +  +E+ +    Y+I +R++
Sbjct: 907 PANIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQN 945



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 137/380 (36%), Gaps = 44/380 (11%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK--HVEFSDQGSYT 103
           L   +V L C   G P P   W ++G  I+ +        G SL I   H +  D G Y 
Sbjct: 41  LSKSEVILKCAANGYPSPHYRWKQNGTDIDFTMSYHYRLDGGSLAISSPHTD-QDIGMYQ 99

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPEI----- 157
           C  +N +G   S    L       F T     ++  E + V   C     P P       
Sbjct: 100 CLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCG----PPPHFGDLSY 155

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY---------- 205
            W  N  P+     N RR V      + I  +  SD GNY C  TN              
Sbjct: 156 AWTFNDNPLYVQEDN-RRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPPTPL 214

Query: 206 ------VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKE 258
                 V  +    +    PE  +A KD       +V L C   G P P+++W   + + 
Sbjct: 215 VQRTDGVMGEYEPKIEVRFPETIQAAKD------SSVKLECFALGNPVPDISWRRLDGRP 268

Query: 259 LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYE 318
           L G          L+I +    D G Y C A N  G     G L          + ++  
Sbjct: 269 LPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPPEWEQKIQNTY 328

Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQ 378
           +    +  ++C A   P+   +  WL+  E ++ E     +Q  + +L +T  +  DSG 
Sbjct: 329 LSIYDNLLWKCKASGKPNPWYT--WLKNGERLNPEER---IQIENGTLIITMLNVSDSGV 383

Query: 379 YTCRAQTELDFIEAQATLTV 398
           Y C A+ +   I A A L V
Sbjct: 384 YQCAAENKYQIIYANAELRV 403



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 106/288 (36%), Gaps = 36/288 (12%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L+ P FT EP    F     +  V  +C A+G P P   W  NG  I        R  G
Sbjct: 22  LLSRPIFTQEPHDVIFPLDLSKSEVILKCAANGYPSPHYRWKQNGTDIDFTMSYHYRLDG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            +          D G Y C ATN LG +         A+  +     +   +V +G+ VV
Sbjct: 82  GSLAISSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        W  N   L       R+   ETG+L I  V  +D G YTCF
Sbjct: 142 LLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCF 197

Query: 289 ARNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSL 337
             NK    + QG  +  V+    +  +         PE  +     S    C A+ +P  
Sbjct: 198 ITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQ--SNDYSLTVTKSSELDSGQYTCRA 383
            +S  W R    +D    P  V+   +   L +    + D G Y C A
Sbjct: 258 DIS--WRR----LDGRPLPGKVKYSKSQAILEIPNFQQEDEGFYECIA 299



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 14/190 (7%)

Query: 409 TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
           T +Q   A +  VSWN ++     G   GY+V  WT+   E  I ++ V+ G  TT  + 
Sbjct: 809 TSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVS-GNVTTKNIT 867

Query: 469 KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VK 526
                +  FA V A+N A  GP S  ++  T +  P    +  A  L +S   L W  VK
Sbjct: 868 GLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLTNSKLCLNWEHVK 927

Query: 527 PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGY 585
             +    ++GYKI Y+  + +K         +I +   TSA+L  L P    Y I +   
Sbjct: 928 TMENESEVLGYKILYRQNRQSKT--------HILETNNTSAEL--LVPFEEDYLIEIRTV 977

Query: 586 TKAGDGAESK 595
           +  GDG+ S+
Sbjct: 978 SDGGDGSSSE 987


>gi|354478087|ref|XP_003501247.1| PREDICTED: contactin-2 [Cricetulus griseus]
          Length = 1040

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 169/620 (27%), Positives = 270/620 (43%), Gaps = 39/620 (6%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 253 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWATAE----PTLQIPSVSFEDEGTYEC 308

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           E  N  G   +    + V A P +        A     + + C A+G P P + W+ NG+
Sbjct: 309 EAENSKGR-DTVQGRIVVQAQPEWLKVISDTEADIGSNLRWACAAAGKPRPMVRWLRNGE 367

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           P++      R +V    +    L   D+G Y C A N  G +Y    + V A AP+  + 
Sbjct: 368 PLAS---QNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRQN 424

Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P         G  + + C+   APK  + W    + L    R T+   G L I +++ +D
Sbjct: 425 PVRRLIPAARGGEISIPCQPRAAPKATILWSKGTEILGNSTRVTVTSDGTLIIRNISRSD 484

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP++ L+ 
Sbjct: 485 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGDNLTLQCHASHDPTMDLTF 544

Query: 342 VWLRGSEPIDFES-----EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W     PI+F+          V+     LT+  +     G+Y C AQT +D    +AT+
Sbjct: 545 TWTLDDFPINFDKPGGHYRRASVKETIGDLTILNAQLRHGGKYMCMAQTVVDGASKEATV 604

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GSIR 453
            V+ P   P    +  + D     VSW+    +    H     Y +Q  T   G+   +R
Sbjct: 605 LVRGPPGPPGGVVVRDIGDT-TVQVSWS----RGFDNHSPIAKYTLQARTPPSGKWKQVR 659

Query: 454 ELIVN-KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLE 511
              VN +G + T +V   +P      RV A N    G PS   S + T E VP    S  
Sbjct: 660 TNPVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSRIRTKEAVPSVAPSGL 719

Query: 512 AIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
           +   G+     + W  +  E  NG   GY + ++  +G+ V     R+P  +D       
Sbjct: 720 SGGGGAPGELIINWTPMSREYQNGDGFGYLLSFRR-QGSSVW-QTARVPG-ADAQYFVYS 776

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGSTPNNLVISWT 623
              + P T + + +  Y + GDG ES   L Y     P   P  V  +GS+ + L +SW 
Sbjct: 777 NDSIHPYTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGSSSSELNVSWE 836

Query: 624 AMPEIEHNAPHFKYRI-FWR 642
           ++ + + N     Y I +W+
Sbjct: 837 SVQQ-DTNGILLGYEIRYWK 855



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 145/374 (38%), Gaps = 38/374 (10%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN--PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           +V L C    +P     W  +G  +N  P  R  Q   G  +I+   +  D G Y C  S
Sbjct: 58  QVTLACRARASPPATYRWKMNGTDMNLEPGSR-HQLMGGNLVIMSPTKAQDAGVYQCLAS 116

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIH-------W 159
           N VG   S    L       F    EF     +   T E     LP  P  H       W
Sbjct: 117 NPVGTVVSKEAVLR------FGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYRW 170

Query: 160 VHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY-----V 212
           + N  P +  P + R  V      + I     SD GNY C AT+ + +  K V+     +
Sbjct: 171 LLNEFP-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQL 229

Query: 213 NVLAHAPEI------TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
           N+ A  P +         P + Y + G+ V L C  FG P P + W      L+    T 
Sbjct: 230 NLAAEDPRLFAPSIKARFPPETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWATA 289

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
             T  L+I  V+F D G Y C A N  G     G + V+          D E + G +  
Sbjct: 290 EPT--LQIPSVSFEDEGTYECEAENSKGRDTVQGRIVVQAQPEWLKVISDTEADIGSNLR 347

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + C A   P  +  + WLR  EP+  ++    +  +   L  +K S  DSG Y C A+ +
Sbjct: 348 WACAAAGKP--RPMVRWLRNGEPLASQNRVEVLAGD---LRFSKLSLEDSGMYQCVAENK 402

Query: 387 LDFIEAQATLTVQV 400
              I A A L VQ 
Sbjct: 403 HGTIYASAELAVQA 416



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 141/639 (22%), Positives = 247/639 (38%), Gaps = 85/639 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P+   +R+        L    +   D G Y C   N  G   
Sbjct: 350 CAAAGKPRPMVRWLRNGEPLASQNRVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTIY 407

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F   P    I AA    ++  C+    P+  I W    + +  +  
Sbjct: 408 A-SAELAVQALAPDFRQNPVRRLIPAARGGEISIPCQPRAAPKATILWSKGTEILGNST- 465

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V  +  + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 466 --RVTVTSDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 522

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G  + L C     P  ++ +     +        GG Y   ++ ET GDL I +    
Sbjct: 523 NVGDNLTLQCHASHDPTMDLTFTWTLDDFPINFDKPGGHYRRASVKETIGDLTILNAQLR 582

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE-----DYEVEAGQS---------AT 326
             G+Y C A+  +  A    ++ V+               D  V+   S         A 
Sbjct: 583 HGGKYMCMAQTVVDGASKEATVLVRGPPGPPGGVVVRDIGDTTVQVSWSRGFDNHSPIAK 642

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQYT 380
           +   A + PS K   V    + P++ E      Q        DY   V+ S+ L +G+ +
Sbjct: 643 YTLQARTPPSGKWKQV---RTNPVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPS 699

Query: 381 ---CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRG 437
               R +T+      +A  +V     +       ++I      ++W P+S +   G   G
Sbjct: 700 GPSSRIRTK------EAVPSVAPSGLSGGGGAPGELI------INWTPMSREYQNGDGFG 747

Query: 438 YKVQ-------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGP 490
           Y +         W      G+  +  V   +S    +  + P      ++ ++N   +GP
Sbjct: 748 YLLSFRRQGSSVWQTARVPGADAQYFVYSNDS----IHPYTPFE---VKIRSYNRRGDGP 800

Query: 491 PSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQ-PNGVLMGYKIKYQSVKGTK 548
            S      + E  P    + + A    SS   + W   +Q  NG+L+GY+I+Y      +
Sbjct: 801 ESLTALVYSAEEEPRVAPTKVWAKGSSSSELNVSWESVQQDTNGILLGYEIRYWKAGDNE 860

Query: 549 VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-----AESKYLFYVPFK 603
                 R   +     TSA++ GL P+TKY + +  Y +AG G     A++  +   P +
Sbjct: 861 AAADRVRTAGLD----TSARVTGLYPNTKYHVTVRAYNRAGTGPASPSADAMTMKPPPRR 916

Query: 604 NPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
            P N+    S+ ++L + W  +  +++ +    Y++ ++
Sbjct: 917 PPGNISWTFSS-SSLNLKWDPVVPLQNESTVTGYKMLYQ 954



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 140/654 (21%), Positives = 230/654 (35%), Gaps = 75/654 (11%)

Query: 88  SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
           +L I     SD G+Y+C      + S     +K   ++L+     L AP      P    
Sbjct: 193 NLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPPETY 252

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + VT EC A G P P I W      +S     P+       + I ++   D G Y 
Sbjct: 253 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-----PQWATAEPTLQIPSVSFEDEGTYE 307

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V A  PE  +   D     G  +   C   G P+P V W+ N 
Sbjct: 308 CEAENSKGRDTVQGRIVVQAQ-PEWLKVISDTEADIGSNLRWACAAAGKPRPMVRWLRNG 366

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
           + L       +  GDL+ + ++  DSG Y C A NK GT   S  L V+         P 
Sbjct: 367 EPLASQNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRQNPV 426

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
              + A +            + K +I+W +G+E +   +  R   ++D +L +   S  D
Sbjct: 427 RRLIPAARGGEISIPCQPRAAPKATILWSKGTEILGNST--RVTVTSDGTLIIRNISRSD 484

Query: 376 -----------------SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKK 418
                            +G  + R  T++    + A + V   L    + +    +D   
Sbjct: 485 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGDNLTLQCHASHDPTMDL-- 542

Query: 419 AVVSWN----PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
              +W     P++     GH+R   V+   E  G+ +I    +  G          V  +
Sbjct: 543 -TFTWTLDDFPINFDKPGGHYRRASVK---ETIGDLTILNAQLRHGGKYMCMAQTVVDGA 598

Query: 475 KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
              A VL                            +    +G +   + W +    +  +
Sbjct: 599 SKEATVLVRGPPG------------------PPGGVVVRDIGDTTVQVSWSRGFDNHSPI 640

Query: 535 MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
             Y ++ ++    K   +    P   +    +A++ GL P   Y   ++     G G  S
Sbjct: 641 AKYTLQARTPPSGKWKQVRTN-PVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPS 699

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P  + G G  P  L+I+WT M     N   F Y + +RR  +  
Sbjct: 700 GPSSRIRTKEAVPSVAPSGLSGGGGAPGELIINWTPMSREYQNGDGFGYLLSFRRQGS-S 758

Query: 649 AWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
            W    V        V +N     + P+E+K+       DG  S+  L+ +  E
Sbjct: 759 VWQTARVPGADAQYFVYSNDSIHPYTPFEVKIRSYNRRGDGPESLTALVYSAEE 812



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 116/298 (38%), Gaps = 30/298 (10%)

Query: 125 APYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P F  +P    F   + E+ VT  C+A   P     W  NG  ++  P +  + +G N 
Sbjct: 38  GPVFEDQPVGLLFPEESTEDQVTLACRARASPPATYRWKMNGTDMNLEPGSRHQLMGGNL 97

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTC 240
           + +   +  D G Y C A+N +G V     V       E ++  +D   T +G  V+L C
Sbjct: 98  VIMSPTKAQDAGVYQCLASNPVGTVVSKEAVLRFGFLQEFSKEERDPVKTHEGWGVMLPC 157

Query: 241 RVFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGT 295
                 P     W+ N+      T GR+ + + TG+L I     +D G Y+C A + +  
Sbjct: 158 NPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDF 217

Query: 296 AQGSGSLTVKEHTHITDQ-------------PEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           +  S      +     +              PE Y +  GQ  T  C A  +P  +  I 
Sbjct: 218 STKSVFSKFAQLNLAAEDPRLFAPSIKARFPPETYAL-VGQQVTLECFAFGNPVPR--IK 274

Query: 343 WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           W +    +D    P++  + + +L +   S  D G Y C A+        Q  + VQ 
Sbjct: 275 WRK----VDGSLSPQWATA-EPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIVVQA 327


>gi|149058636|gb|EDM09793.1| contactin 2 [Rattus norvegicus]
          Length = 1040

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 171/629 (27%), Positives = 274/629 (43%), Gaps = 57/629 (9%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 253 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWATAE----PTLQIPSVSFEDEGTYEC 308

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           E  N  G   +    + V A P +        A     + + C A+G P P + W+ NG+
Sbjct: 309 EAENSKGR-DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPMVRWLRNGE 367

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           P++      R +V    +    L   D+G Y C A N  G +Y    + V A AP+  + 
Sbjct: 368 PLAS---QNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRQN 424

Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P         G  + + C+   APK  + W    + L    R T+   G L I +++ +D
Sbjct: 425 PVRRLIPAARGGEISILCQPRAAPKATILWSKGTEILGNSTRVTVTSDGTLIIRNISRSD 484

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP++ L+ 
Sbjct: 485 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGDNLTLQCHASHDPTMDLTF 544

Query: 342 VWLRGSEPIDFE---SEPRFVQSNDY--SLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W     PIDF+      R   + +    LT+  +     G+YTC AQT +D    +AT+
Sbjct: 545 TWTLDDFPIDFDKPGGHYRRASAKETIGDLTILNAQLRHGGKYTCMAQTVVDGTSKEATV 604

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GSIR 453
            V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G+   +R
Sbjct: 605 LVRGPPGPPGGVVVRDIGDT-TVQLSWS----RGFDNHSPIAKYTLQARTPPSGKWKQVR 659

Query: 454 ELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGVPGTVQ 508
              VN +G + T +V   +P      RV A N    G  +GP S+I    T E VP    
Sbjct: 660 TNPVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSKI---RTKEAVPSVAP 716

Query: 509 SLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQ-----SVKGTKV-GPLLERLPYI 559
           S  +   G+     + W  V  E  NG   GY + ++     S +  +V G   +   Y 
Sbjct: 717 SGLSGGGGAPGELIINWTPVSREYQNGDGFGYLLSFRRQGSSSWQTARVPGADAQYFVYG 776

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGST 614
           +D          ++P T + + +  Y + GDG ES   L Y     P   P  V  +GS+
Sbjct: 777 ND---------SIQPYTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPAKVWAKGSS 827

Query: 615 PNNLVISWTAMPEIEHNAPHFKYRI-FWR 642
            + + +SW  + + + N     Y I +W+
Sbjct: 828 SSEMNVSWEPVLQ-DMNGILLGYEIRYWK 855



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 145/374 (38%), Gaps = 38/374 (10%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN--PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           +V L C    +P     W  +G  +N  P  R  Q   G  +I+   +  D G Y C  S
Sbjct: 58  QVTLACRARASPPATYRWKMNGTDMNLEPGSR-HQLMGGNLVIMSPTKTQDAGVYQCLAS 116

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIH-------W 159
           N VG   S    L       F    EF     +   T E     LP  P  H       W
Sbjct: 117 NPVGTVVSKEAVLR------FGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYRW 170

Query: 160 VHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY-----V 212
           + N  P +  P + R  V      + I     SD GNY C AT+ + +  K V+     +
Sbjct: 171 LLNEFP-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQL 229

Query: 213 NVLAHAPEI------TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
           N+ A  P +         P + Y + G+ V L C  FG P P + W      L+    T 
Sbjct: 230 NLAAEDPRLFAPSIKARFPPETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWATA 289

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
             T  L+I  V+F D G Y C A N  G     G + V+          D E + G +  
Sbjct: 290 EPT--LQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNLR 347

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + C A   P  +  + WLR  EP+  ++    +  +   L  +K S  DSG Y C A+ +
Sbjct: 348 WGCAAAGKP--RPMVRWLRNGEPLASQNRVEVLAGD---LRFSKLSLEDSGMYQCVAENK 402

Query: 387 LDFIEAQATLTVQV 400
              I A A L VQ 
Sbjct: 403 HGTIYASAELAVQA 416



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 152/655 (23%), Positives = 241/655 (36%), Gaps = 77/655 (11%)

Query: 88  SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
           +L I     SD G+Y+C      + S     +K   ++L+     L AP      P    
Sbjct: 193 NLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPPETY 252

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + VT EC A G P P I W      +S     P+       + I ++   D G Y 
Sbjct: 253 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-----PQWATAEPTLQIPSVSFEDEGTYE 307

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V A  PE  +   D     G  +   C   G P+P V W+ N 
Sbjct: 308 CEAENSKGRDTVQGRIIVQAQ-PEWLKVISDTEADIGSNLRWGCAAAGKPRPMVRWLRNG 366

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
           + L       +  GDL+ + ++  DSG Y C A NK GT   S  L V+         P 
Sbjct: 367 EPLASQNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRQNPV 426

Query: 316 DYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
              + A  G   +  C   + P  K +I+W +G+E +   +  R   ++D +L +   S 
Sbjct: 427 RRLIPAARGGEISILCQPRAAP--KATILWSKGTEILGNST--RVTVTSDGTLIIRNISR 482

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APS--------NFTLIQVIDAKKAVV- 421
            D G+YTC A+  +    +   L+V+   +   APS        N TL Q   +    + 
Sbjct: 483 SDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGDNLTL-QCHASHDPTMD 541

Query: 422 ---SWN----PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
              +W     P+      GH+R    +   E  G+ +I    +  G   T      V  +
Sbjct: 542 LTFTWTLDDFPIDFDKPGGHYRRASAK---ETIGDLTILNAQLRHGGKYTCMAQTVVDGT 598

Query: 475 KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
              A VL                            +    +G +   L W +    +  +
Sbjct: 599 SKEATVLVRGPPG------------------PPGGVVVRDIGDTTVQLSWSRGFDNHSPI 640

Query: 535 MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
             Y ++ ++    K   +    P   +    +A++ GL P   Y   ++     G G  S
Sbjct: 641 AKYTLQARTPPSGKWKQVRTN-PVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPS 699

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P  + G G  P  L+I+WT +     N   F Y + +RR  +  
Sbjct: 700 GPSSKIRTKEAVPSVAPSGLSGGGGAPGELIINWTPVSREYQNGDGFGYLLSFRRQGS-S 758

Query: 649 AWNQDDVLDWRQSELVLAN---QPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
           +W    V        V  N   QP + P+E+K+       DG  S+  L+ +  E
Sbjct: 759 SWQTARVPGADAQYFVYGNDSIQP-YTPFEVKIRSYNRRGDGPESLTALVYSAEE 812



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 142/607 (23%), Positives = 228/607 (37%), Gaps = 70/607 (11%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P+   +R+        L    +   D G Y C   N  G   
Sbjct: 350 CAAAGKPRPMVRWLRNGEPLASQNRVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTIY 407

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F   P    I AA    ++  C+    P+  I W    + +  +  
Sbjct: 408 A-SAELAVQALAPDFRQNPVRRLIPAARGGEISILCQPRAAPKATILWSKGTEILGNST- 465

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V  +  + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 466 --RVTVTSDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 522

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G  + L C     P  ++ +     +        GG Y   +  ET GDL I +    
Sbjct: 523 NVGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRASAKETIGDLTILNAQLR 582

Query: 281 DSGEYTCFARNKL-GTAQGSGSLTVKEHTHITDQPE----DYEVEAGQS---------AT 326
             G+YTC A+  + GT++ +  L                 D  V+   S         A 
Sbjct: 583 HGGKYTCMAQTVVDGTSKEATVLVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAK 642

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQYT 380
           +   A + PS K   V    + P++ E      Q        DY   V+ S+ L +G+ +
Sbjct: 643 YTLQARTPPSGKWKQV---RTNPVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPS 699

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
               +++   EA  ++                     + +++W PVS +   G   GY +
Sbjct: 700 G-PSSKIRTKEAVPSVAPSG--------LSGGGGAPGELIINWTPVSREYQNGDGFGYLL 750

Query: 441 QTWTEKDGEGSIRELIVNKGEST--TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
                + G  S +   V   ++       D   P +    ++ ++N   +GP S      
Sbjct: 751 SF--RRQGSSSWQTARVPGADAQYFVYGNDSIQPYTPFEVKIRSYNRRGDGPESLTALVY 808

Query: 499 TPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKGTKVGPLLERL 556
           + E  P    + + A    SS   + W    Q  NG+L+GY+I+Y      +      R 
Sbjct: 809 SAEEEPRVAPAKVWAKGSSSSEMNVSWEPVLQDMNGILLGYEIRYWKAGDNEAAADRVRT 868

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPN 616
             +     TSA++ GL P+TKY + +  Y +AG G  S     +  K P         P 
Sbjct: 869 AGLD----TSARVTGLNPNTKYHVTVRAYNRAGTGPASPSADAMTVKPPPR-----RPPG 919

Query: 617 NLVISWT 623
           N  ISWT
Sbjct: 920 N--ISWT 924



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 116/298 (38%), Gaps = 30/298 (10%)

Query: 125 APYFTVEP---EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P F  +P    F   + E+ VT  C+A   P     W  NG  ++  P +  + +G N 
Sbjct: 38  GPIFEEQPIGLLFPEESAEDQVTLACRARASPPATYRWKMNGTDMNLEPGSRHQLMGGNL 97

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTC 240
           + +   +  D G Y C A+N +G V     V       E ++  +D   T +G  V+L C
Sbjct: 98  VIMSPTKTQDAGVYQCLASNPVGTVVSKEAVLRFGFLQEFSKEERDPVKTHEGWGVMLPC 157

Query: 241 RVFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGT 295
                 P     W+ N+      T GR+ + + TG+L I     +D G Y+C A + +  
Sbjct: 158 NPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDF 217

Query: 296 AQGSGSLTVKEHTHITDQ-------------PEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           +  S      +     +              PE Y +  GQ  T  C A  +P  +  I 
Sbjct: 218 STKSVFSKFAQLNLAAEDPRLFAPSIKARFPPETYAL-VGQQVTLECFAFGNPVPR--IK 274

Query: 343 WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           W +    +D    P++  + + +L +   S  D G Y C A+        Q  + VQ 
Sbjct: 275 WRK----VDGSLSPQWATA-EPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQA 327



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 9/185 (4%)

Query: 35  QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV 94
           +Q   R+   A R  ++ + C     P    +WSK    +  S R++  + G +LII+++
Sbjct: 422 RQNPVRRLIPAARGGEISILCQPRAAPKATILWSKGTEILGNSTRVTVTSDG-TLIIRNI 480

Query: 95  EFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPE 154
             SD+G YTC   N +G+A S  I LSV  A   T+ P   +    + +T +C AS  P 
Sbjct: 481 SRSDEGKYTCFAENFMGKANSTGI-LSVRDATKITLAPSSADINVGDNLTLQCHASHDPT 539

Query: 155 PEI--HWVHNGKPISQAPPNPRRKVGPNR-----ITIENLRKSDTGNYGCNATNSLGYVY 207
            ++   W  +  PI    P    +    +     +TI N +    G Y C A   +    
Sbjct: 540 MDLTFTWTLDDFPIDFDKPGGHYRRASAKETIGDLTILNAQLRHGGKYTCMAQTVVDGTS 599

Query: 208 KDVYV 212
           K+  V
Sbjct: 600 KEATV 604


>gi|308492299|ref|XP_003108340.1| CRE-SAX-7 protein [Caenorhabditis remanei]
 gi|308249188|gb|EFO93140.1| CRE-SAX-7 protein [Caenorhabditis remanei]
          Length = 1340

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 195/797 (24%), Positives = 325/797 (40%), Gaps = 86/797 (10%)

Query: 8    EYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIW 67
            +YK GN+  L  I      S  +  P +QYV +   +AL+  + +L C F G P P+  W
Sbjct: 229  DYKFGNQFSLQ-ITNNKRRSLQQMPPTEQYVNQSSPIALQGNQHKLHCFFSGYPAPKPRW 287

Query: 68   SKDGVPINPSDRISQG----NYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDL--- 120
              +G  I+  D  S G    +YGK+L+  +V  +  G Y C  +      +++++ +   
Sbjct: 288  FHNGREIS-EDSDSAGFRFESYGKTLVF-NVTQAKAGKYDCRFATQNDIDRTFNVIIISE 345

Query: 121  ---------SVLAAPYFTV-EPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAP 170
                     +  AAPY+    P   N +E E VTF+C   G P P++ +  NG  +  +P
Sbjct: 346  QPIQLFSYTNFSAAPYWPQGPPPNTNTSEGENVTFDCTTYGKPTPKVTFYKNGVEMG-SP 404

Query: 171  PNPRRKVGPNRITIENLR-----KSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
             + R  +   R+TI +++     K D   Y C + N  G+++ + Y+N+LA  P++   P
Sbjct: 405  KDDRYLIEGTRLTIYDVKKGTYGKGDNAVYQCKSENKHGWLWTNFYLNLLAFKPQLLIDP 464

Query: 226  KDE--YTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE---TGDLKITDVAFA 280
              E    V G+ V L C+ F +P   V W       + G     +    G L  ++V  A
Sbjct: 465  GKEEVEAVVGQKVTLECKFFASPNAAVKWEAPMISGSKGHQIPADPYGVGRLVFSEVTAA 524

Query: 281  DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE-AGQSATFRCNAVSDPSLKL 339
            + GEY C   NK G A GS +L V++ T +       EV  AG+     C+A +D  L++
Sbjct: 525  EEGEYECIGTNKYGQASGSITLKVRKPTVVQPFARAEEVRMAGEEMVLPCDATADNQLEV 584

Query: 340  SIVWLRGSEPIDFE--SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
               WL    P+  E  +   +   +D+SL V   ++ DS +Y C   T+LD +E +  + 
Sbjct: 585  KYEWLVDGIPLPEERMNSGHYRIGDDHSLIVANPTQDDSAKYKCIVSTKLDKVEKEIKIQ 644

Query: 398  VQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSI-REL 455
             + VP    S F      ++  A + +  +         + + VQ   + + EGS  R  
Sbjct: 645  FKDVPRAVHSAFVNNCDKNSLTAFIKFEHIESIHTIAPVKEFWVQYQMDSETEGSQWRTH 704

Query: 456  IVNKGESTTTEVD------------KFVPASKNFARVLAFNGAYNGPPSEIISFV----- 498
             V        +VD               P  K   RVLA N   +   + +         
Sbjct: 705  PVPSAAHPNDQVDDQLRKTSGSATVSLQPFGKYVFRVLARNSVGDSATTTVKGICETPAK 764

Query: 499  TPEGVPGTVQSLEAIPLGSSAFYLKWVKP---EQPNGVLMGYKIKYQSV-KGTKVGPLLE 554
             P+  PG V +    P       ++W KP   E+ NG    Y +KY+ V +  + G   E
Sbjct: 765  QPDKNPGEVAAKGTSP---ENLIVQW-KPMAREEWNGANFHYIVKYRPVDEDQRDGDWKE 820

Query: 555  ---RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG------DGAESKYLFYVPFKNP 605
                 P+    T        ++P   Y + +      G      +  E +    VP   P
Sbjct: 821  VAVEDPFADRVTINLDDDKDVKPFQPYEVQVQAINSEGRTSVVPETVEGRTGEGVPSSIP 880

Query: 606  DNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVL 665
              +     +   + ++W  +     N     Y+I +        W  +   D  + E   
Sbjct: 881  SGLRVLEKSGTTVTLAWNGVDPATANGNFTGYKITY--------WVDEADQDVDEPEDDD 932

Query: 666  ANQPTFQ-PYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNG 724
              +  F+    I+V +       +  +R+ IV    +T   +    PA+ N A +   NG
Sbjct: 933  EEKRKFRWKRSIRVKR-------QAGVRKTIVFGPSATQGTITDLKPATLNHAYIQVTNG 985

Query: 725  AYNGPPSEIISFVTPEG 741
            A+ GP S+ I F T EG
Sbjct: 986  AHEGPSSDTIDFQTDEG 1002



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 98/225 (43%), Gaps = 36/225 (16%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK------------- 446
            VP   PS   +++        ++WN V P +  G+F GYK+  W ++             
Sbjct: 875  VPSSIPSGLRVLEK-SGTTVTLAWNGVDPATANGNFTGYKITYWVDEADQDVDEPEDDDE 933

Query: 447  -------------DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
                           +  +R+ IV    +T   +    PA+ N A +   NGA+ GP S+
Sbjct: 934  EKRKFRWKRSIRVKRQAGVRKTIVFGPSATQGTITDLKPATLNHAYIQVTNGAHEGPSSD 993

Query: 494  IISFVTPEGVPGTVQSLEAIPLGSS------AFYLKWVKPEQPNGVLMGYKIKY-QSVKG 546
             I F T EGVP  V+SL A P+ S          L W KP Q NG L  Y+++Y ++  G
Sbjct: 994  TIDFQTDEGVPSPVRSLRAYPMNSKDGDEKGVVVLVWKKPRQTNGKLARYEVEYCKTQNG 1053

Query: 547  TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             +V     R    +D      ++ GLE  T YR  L  +T AG+G
Sbjct: 1054 KQVEKTCPRQQIDAD--AKEIRITGLENETPYRFILRAHTSAGEG 1096



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 95/265 (35%), Gaps = 33/265 (12%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPS---DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           + C+  G P P   W KDG    PS   +++ Q     SL+   ++ +D G Y CE  N 
Sbjct: 65  IHCLANGNPRPSYRWKKDGKSFLPSMFPEKVVQKPGEGSLVFSRLDETDAGLYQCEAENS 124

Query: 110 VGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECK-ASGLPEPEIHWVHNGKPIS 167
            G A    + +      +F T EPE +     +     C   +  P   ++W+  GK   
Sbjct: 125 NGTAVDRPVRVQETWIRHFKTAEPEVVVVEVGDPYQRNCSPPASNPTARVYWILMGKEPG 184

Query: 168 QAPPNPRRKVGPN-------RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA---- 216
                    +  N           E   KSD   Y C A N     YK  + N  +    
Sbjct: 185 HFETISSSHISSNEQGTLFFHYVNETDLKSDR-YYTCTAENIELKDYK--FGNQFSLQIT 241

Query: 217 --HAPEITEAPKDEYTVD--------GKTVVLTCRVFGAPKPEVNWIHNQKELT----GG 262
                 + + P  E  V+        G    L C   G P P+  W HN +E++      
Sbjct: 242 NNKRRSLQQMPPTEQYVNQSSPIALQGNQHKLHCFFSGYPAPKPRWFHNGREISEDSDSA 301

Query: 263 RYTILETGDLKITDVAFADSGEYTC 287
            +     G   + +V  A +G+Y C
Sbjct: 302 GFRFESYGKTLVFNVTQAKAGKYDC 326



 Score = 40.0 bits (92), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 76/331 (22%), Positives = 113/331 (34%), Gaps = 60/331 (18%)

Query: 111 GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFE------------------------ 146
           G   + ++D SV+  P     P+F++    +TV F+                        
Sbjct: 12  GHLSAGNVDWSVIETP-----PQFVHDKNADTVFFKVEKSGMSDESAKNTPGNLLEQTIH 66

Query: 147 CKASGLPEPEIHWVHNGKPI--SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLG 204
           C A+G P P   W  +GK    S  P    +K G   +    L ++D G Y C A NS G
Sbjct: 67  CLANGNPRPSYRWKKDGKSFLPSMFPEKVVQKPGEGSLVFSRLDETDAGLYQCEAENSNG 126

Query: 205 -YVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA-PKPEVNWIHNQKE---- 258
             V + V V         T  P+      G      C    + P   V WI   KE    
Sbjct: 127 TAVDRPVRVQETWIRHFKTAEPEVVVVEVGDPYQRNCSPPASNPTARVYWILMGKEPGHF 186

Query: 259 --LTGGRYTILETGDL---KITDVAFADSGEYTCFARN------KLGTAQGSGSLTVKEH 307
             ++    +  E G L    + +        YTC A N      K G  Q S  +T  + 
Sbjct: 187 ETISSSHISSNEQGTLFFHYVNETDLKSDRYYTCTAENIELKDYKFGN-QFSLQITNNKR 245

Query: 308 THITDQP--EDYEVEA------GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFV 359
             +   P  E Y  ++      G      C     P+ K    W      I  +S+    
Sbjct: 246 RSLQQMPPTEQYVNQSSPIALQGNQHKLHCFFSGYPAPKPR--WFHNGREISEDSDSAGF 303

Query: 360 QSNDYSLT-VTKSSELDSGQYTCRAQTELDF 389
           +   Y  T V   ++  +G+Y CR  T+ D 
Sbjct: 304 RFESYGKTLVFNVTQAKAGKYDCRFATQNDI 334


>gi|345797925|ref|XP_003434377.1| PREDICTED: contactin-2 [Canis lupus familiaris]
          Length = 1016

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 168/623 (26%), Positives = 268/623 (43%), Gaps = 45/623 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+PQ  W K    ++P    ++     +L I  + F D+G+Y C
Sbjct: 227 ALVGQQVTLECFAFGNPVPQIKWRKVDGSLSPQWATAE----PTLQIPSISFEDEGTYEC 282

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           E  N  G   +    + V A P +      + A     + + C A+G P P + W+ NG+
Sbjct: 283 EAENSKGR-DTVQGRIIVQAQPEWLKVISDMEADIGSNLRWGCAAAGKPRPTVRWLRNGE 341

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           P++      R +V    +    L   D+G Y C A N  G +Y    + V A AP+    
Sbjct: 342 PLTS---QSRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLN 398

Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           P         G  + + C+   APK  V W    + L    R T+   G L I +++ +D
Sbjct: 399 PVKRLIPAARGGEIAIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSD 458

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+YTCFA N +G A  +G L+V++ T IT  P   ++  G S T +C+A  DP++ L+ 
Sbjct: 459 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDSLTLQCHASHDPTMDLTF 518

Query: 342 VWLRGSEPIDFE---SEPRFVQSNDY--SLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
           +W     PIDF+      R   + +    LT+  +     G+YTC AQT +D    +AT+
Sbjct: 519 IWTLDDFPIDFDKPGGHYRRASAKETVGDLTILNAQLRHGGKYTCMAQTVVDSASKEATV 578

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GSIR 453
            V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G+   +R
Sbjct: 579 LVRGPPGPPGGVVVRNIGDT-TVQLSWS----RGFDNHSPIAKYTLQARTPPAGKWKQVR 633

Query: 454 ELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGVPGTVQ 508
               N +G + T +V    P      RV+A N    G  +GP S+I    T E  P    
Sbjct: 634 TNPANIEGNAETAQVLGLTPWMDYEFRVVASNILGTGEPSGPSSKI---RTKEAAPSVAP 690

Query: 509 SLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565
           S  +   G+     L W  V  E  NG   GY + ++   G+  G    R+P  +D    
Sbjct: 691 SGLSGGGGAPGELILNWTPVPREYQNGDGFGYLLSFRRQGGS--GWQTARVPG-ADAQHF 747

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEGRGSTPNNLVI 620
                 + P T + + +  Y + GDG ES           P   P  V  +G + + + +
Sbjct: 748 VYSNDSVRPYTPFEVKIRSYNRRGDGPESLTALVHSAEEEPRVAPTKVWAKGVSSSEMNV 807

Query: 621 SWTAMPEIEHNAPHFKYRI-FWR 642
           +W  + + + N     Y I +W+
Sbjct: 808 TWEPVQQ-DMNGILLGYEIRYWK 829



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 140/630 (22%), Positives = 241/630 (38%), Gaps = 67/630 (10%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P+    R+        L    +   D G Y C   N  G   
Sbjct: 324 CAAAGKPRPTVRWLRNGEPLTSQSRVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTIY 381

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F + P    I AA    +   C+    P+  + W    + +  +  
Sbjct: 382 A-SAELAVQALAPDFRLNPVKRLIPAARGGEIAIPCQPRAAPKAVVLWSKGTEILVNSS- 439

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V P+  + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 440 --RVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 496

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G ++ L C     P  ++ +I    +        GG Y   +  ET GDL I +    
Sbjct: 497 NLGDSLTLQCHASHDPTMDLTFIWTLDDFPIDFDKPGGHYRRASAKETVGDLTILNAQLR 556

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE-----DYEVEAGQS---------AT 326
             G+YTC A+  + +A    ++ V+               D  V+   S         A 
Sbjct: 557 HGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRNIGDTTVQLSWSRGFDNHSPIAK 616

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQYT 380
           +   A + P+ K   V    + P + E      Q        DY   V  S+ L +G+ +
Sbjct: 617 YTLQARTPPAGKWKQV---RTNPANIEGNAETAQVLGLTPWMDYEFRVVASNILGTGEPS 673

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
               +++   EA  ++                     + +++W PV  +   G   GY +
Sbjct: 674 G-PSSKIRTKEAAPSVAPSG--------LSGGGGAPGELILNWTPVPREYQNGDGFGY-L 723

Query: 441 QTWTEKDGEG-SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
            ++  + G G     +     +      D   P +    ++ ++N   +GP S      +
Sbjct: 724 LSFRRQGGSGWQTARVPGADAQHFVYSNDSVRPYTPFEVKIRSYNRRGDGPESLTALVHS 783

Query: 500 PEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKGTKVGPLLERLP 557
            E  P    + + A  + SS   + W   +Q  NG+L+GY+I+Y      +      R  
Sbjct: 784 AEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGILLGYEIRYWKAGDKEAAADRVRTA 843

Query: 558 YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-----AESKYLFYVPFKNPDNVEGRG 612
            +     TSA++ GL P TKY + +  Y +AG G     A +  +   P + PDN+    
Sbjct: 844 GLD----TSARVTGLHPDTKYHVTIRAYNRAGTGPTSPSANATTMKPPPQRPPDNISWTF 899

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           S+ + L I W  +    + +    Y++ ++
Sbjct: 900 SS-STLSIKWDPVVPFRNESAVTGYKMLYQ 928



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 89/234 (38%), Gaps = 31/234 (13%)

Query: 188 RKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTCRVFGA- 245
           +  D G Y C A+N +G V     V       E ++  +D   T +G  V+L C      
Sbjct: 78  KAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHY 137

Query: 246 PKPEVNWIHNQKE---LTGGRYTILET-GDLKITDVAFADSGEYTCFARNKLGTAQGSGS 301
           P     W+ N+      T GR+ + +T G+L I     +D G Y+C A + +  +  S  
Sbjct: 138 PGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKS-- 195

Query: 302 LTVKEHTHITDQPEDYEVEA---------------GQSATFRCNAVSDPSLKLSIVWLRG 346
               +   +    ED  + A               GQ  T  C A  +P  +  I W + 
Sbjct: 196 -VFSKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPQ--IKWRK- 251

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
              +D    P++  + + +L +   S  D G Y C A+        Q  + VQ 
Sbjct: 252 ---VDGSLSPQWATA-EPTLQIPSISFEDEGTYECEAENSKGRDTVQGRIIVQA 301


>gi|317418928|emb|CBN80966.1| Contactin-3 [Dicentrarchus labrax]
          Length = 1026

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 166/623 (26%), Positives = 265/623 (42%), Gaps = 46/623 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+P+  W +  G+P  PS ++   N    L I +++  D G+Y 
Sbjct: 243 AAKESVVKLECFALGNPVPEISWRRTSGIPF-PS-KVKMKNSNAVLEIPNLQQEDAGTYE 300

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    +S  A P++         + EE + +ECKA+G P+P   W+ NG
Sbjct: 301 CMAENRRGKNAARG-RISFHAKPHWLQTMTDTALSIEENLFWECKATGKPKPSYSWLKNG 359

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
               Q     R ++    ++I  L  SD+G Y C A N  G +Y    + VLA  P  ++
Sbjct: 360 D---QVVAEGRVQIENGALSIAALNLSDSGMYQCVAENKHGIIYSSAQLMVLASPPSFSK 416

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
           +P         G  V L C+   +P     W    + L    R T+L  G LKIT+V   
Sbjct: 417 SPLRALLKARSGSEVTLECKPQASPPAISLWKKGNEILQRTERITLLPNGTLKITNVTRR 476

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+  YTC A+N+ GTA  +G L + E T IT +P + E+  G+S    C    DP+L +S
Sbjct: 477 DAASYTCVAKNQFGTASTTGRLIITEPTRITMRPTNMEIIVGESIVLPCQIACDPALDVS 536

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLT---VTKSSELD-SGQYTCRAQTELDFIEAQATL 396
             W    + IDF+ +    +    S++   + ++ +L+  G+Y C   T+++ +   A L
Sbjct: 537 FSWAFNGQLIDFQRDSDHFERVGGSISGDLMIRNIQLNHGGKYVCVIDTDVESLSTSAIL 596

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKDGE 449
            V+ P   P    + ++ D+  A +SW P           GY +Q        W   D  
Sbjct: 597 VVKGPPGPPDKVAVEEITDS-TAQLSWTPGRDNG--SPITGYIIQARTPFTVGWQAVD-- 651

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQ 508
            ++ E +VN    T T V         F RV+A N    G PS   +   T + +P T  
Sbjct: 652 -TVPE-VVNGNMLTATVVGLNAWVEYEF-RVVARNTVGLGEPSPASTKTRTEDAIPDTAP 708

Query: 509 SLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565
           +      G+ S   + W  V  E  NG   GY I ++      VG +      IS P   
Sbjct: 709 TDVGGGGGTKSELVITWEPVPEELQNGEGFGYIIAFR-----PVGTVTWTRAVISTPGVA 763

Query: 566 SAKLAG--LEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEGRGSTPNNL 618
                   + P + + + +  Y   G+G  S          VP   P  V  R  +   +
Sbjct: 764 RYVFRNDTIPPFSPFDVKVGAYNNRGEGPFSSIATVYSAEEVPSVAPKRVRTRSVSAVQI 823

Query: 619 VISWTAMPEIEHNAPHFKYRIFW 641
            + W A+P I      ++  ++W
Sbjct: 824 EVIWEALPAIPERVLGYE-AVYW 845



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 161/630 (25%), Positives = 250/630 (39%), Gaps = 70/630 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           SL I  VE SD G+YTC V+N V   K  S    ++           P   V  P+ + A
Sbjct: 184 SLYIAKVESSDVGNYTCVVNNTVTREKVLSSPTPLVLRSDGVMGEYEPKIEVHFPDSVPA 243

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+E  V  EC A G P PEI W   +G P    P   + K     + I NL++ D G Y 
Sbjct: 244 AKESVVKLECFALGNPVPEISWRRTSGIPF---PSKVKMKNSNAVLEIPNLQQEDAGTYE 300

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A N  G       ++  A  P   +   D      + +   C+  G PKP  +W+ N 
Sbjct: 301 CMAENRRGKNAARGRISFHAK-PHWLQTMTDTALSIEENLFWECKATGKPKPSYSWLKNG 359

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTV-KEHTHITDQPE 315
            ++       +E G L I  +  +DSG Y C A NK G    S  L V       +  P 
Sbjct: 360 DQVVAEGRVQIENGALSIAALNLSDSGMYQCVAENKHGIIYSSAQLMVLASPPSFSKSPL 419

Query: 316 DYEVEA--GQSATFRCN-AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
              ++A  G   T  C    S P++ L   W +G+E +  +   R     + +L +T  +
Sbjct: 420 RALLKARSGSEVTLECKPQASPPAISL---WKKGNEIL--QRTERITLLPNGTLKITNVT 474

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV----VSWNPVSP 428
             D+  YTC A+ +         L +  P       T +++I  +  V    ++ +P   
Sbjct: 475 RRDAASYTCVAKNQFGTASTTGRLIITEPTRITMRPTNMEIIVGESIVLPCQIACDPALD 534

Query: 429 QSLRGHFRGYKVQTWTEKD----------GEGSIRELIVNKGESTTTEVDKFVPASKNFA 478
            S    F G  +    + D          G+  IR + +N G      +D  V  S + +
Sbjct: 535 VSFSWAFNGQLIDFQRDSDHFERVGGSISGDLMIRNIQLNHGGKYVCVIDTDV-ESLSTS 593

Query: 479 RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV-LMGY 537
            +L   G   GPP ++              ++E I    S   L W  P + NG  + GY
Sbjct: 594 AILVVKGP-PGPPDKV--------------AVEEIT--DSTAQLSWT-PGRDNGSPITGY 635

Query: 538 KIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----- 591
            I  Q+     VG   ++ +P + +    +A + GL    +Y   +      G G     
Sbjct: 636 II--QARTPFTVGWQAVDTVPEVVNGNMLTATVVGLNAWVEYEFRVVARNTVGLGEPSPA 693

Query: 592 -AESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
             +++    +P   P +V G G T + LVI+W  +PE   N   F Y I +R   T   W
Sbjct: 694 STKTRTEDAIPDTAPTDVGGGGGTKSELVITWEPVPEELQNGEGFGYIIAFRPVGT-VTW 752

Query: 651 NQDDVLDWRQSELVLANQ--PTFQPYEIKV 678
            +  +     +  V  N   P F P+++KV
Sbjct: 753 TRAVISTPGVARYVFRNDTIPPFSPFDVKV 782



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 150/636 (23%), Positives = 238/636 (37%), Gaps = 77/636 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +    R+   N   +L I  +  SD G Y C   N  G   
Sbjct: 343 CKATGKPKPSYSWLKNGDQVVAEGRVQIEN--GALSIAALNLSDSGMYQCVAENKHGIIY 400

Query: 115 SYSIDLSVLAAP-YFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           S S  L VLA+P  F+  P    + A     VT ECK    P P I     G  I Q   
Sbjct: 401 S-SAQLMVLASPPSFSKSPLRALLKARSGSEVTLECKPQASP-PAISLWKKGNEILQR-- 456

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  + PN  + I N+ + D  +Y C A N  G       + ++     IT  P +   
Sbjct: 457 TERITLLPNGTLKITNVTRRDAASYTCVAKNQFGTASTTGRL-IITEPTRITMRPTNMEI 515

Query: 231 VDGKTVVLTCRVFGAPKPEVN--WIHNQK-----------ELTGGRYTILETGDLKITDV 277
           + G+++VL C++   P  +V+  W  N +           E  GG  +    GDL I ++
Sbjct: 516 IVGESIVLPCQIACDPALDVSFSWAFNGQLIDFQRDSDHFERVGGSIS----GDLMIRNI 571

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
                G+Y C     + +   S  L VK      D+    E+    +A        D   
Sbjct: 572 QLNHGGKYVCVIDTDVESLSTSAILVVKGPPGPPDKVAVEEI-TDSTAQLSWTPGRDNGS 630

Query: 338 KLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
            ++   ++   P        ++ P  V  N  + TV   +     ++   A+  +   E 
Sbjct: 631 PITGYIIQARTPFTVGWQAVDTVPEVVNGNMLTATVVGLNAWVEYEFRVVARNTVGLGEP 690

Query: 393 QATLTV-----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ------ 441
               T       +P  AP++        ++  V++W PV  +   G   GY +       
Sbjct: 691 SPASTKTRTEDAIPDTAPTDVGGGGGTKSE-LVITWEPVPEELQNGEGFGYIIAFRPVGT 749

Query: 442 -TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF-ARVLAFNGAYNGPPSEIISFVT 499
            TWT        R +I   G +     +  +P    F  +V A+N    GP S I +  +
Sbjct: 750 VTWT--------RAVISTPGVARYVFRNDTIPPFSPFDVKVGAYNNRGEGPFSSIATVYS 801

Query: 500 PEGVPGTV-QSLEAIPLGSSAFYLKW-VKPEQPNGVLMGYKIKY--QSVKGTKVGPLLER 555
            E VP    + +    + +    + W   P  P  VL GY+  Y     K   VG +   
Sbjct: 802 AEEVPSVAPKRVRTRSVSAVQIEVIWEALPAIPERVL-GYEAVYWEDDTKPDTVGKVRIS 860

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEG 610
             Y      T   + GL+ +T Y + +A +  AG G +S  +        P + P N++ 
Sbjct: 861 GNY------TLVNITGLKANTVYYLSVAAFNTAGPGPQSAPINTTTKKPPPDRAPLNIQW 914

Query: 611 R--GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
              GST   L + W  +  +E  +    Y +  +RH
Sbjct: 915 TMIGST---LTLHWDPVVAMETESKVTGYLVLLKRH 947



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 115/289 (39%), Gaps = 35/289 (12%)

Query: 122 VLAAPYFTVEPEF----INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
           +   P +  EP      IN+ ++E  T  C+A G    +  W  NG  I     + RR +
Sbjct: 25  IFQGPRWRTEPSDLILPINSPDQEA-TITCEAEGSSPLQYRWSLNGTLIDLGN-DYRRHM 82

Query: 178 GPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEAPKDEYTV-DGK 234
               + I NL K  DTG Y C A N+ G +         A+     ++  +    V +G+
Sbjct: 83  SGGSLIISNLDKDQDTGVYQCTAFNTWGAILSRRASLQFAYLDNFKSQTVRSAVNVREGQ 142

Query: 235 TVVLTCRVFGAP----KPEVNWIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYT 286
            VVL C   G P    +    WI N+     +    R+   ETG L I  V  +D G YT
Sbjct: 143 GVVLLC---GPPAHSGELTFAWIFNEYPYFVQQDSRRFISQETGSLYIAKVESSDVGNYT 199

Query: 287 CFARNKLGTAQGSGS---LTVKEHTHITDQPEDYEVEAGQS--------ATFRCNAVSDP 335
           C   N +   +   S   L ++    + +     EV    S            C A+ +P
Sbjct: 200 CVVNNTVTREKVLSSPTPLVLRSDGVMGEYEPKIEVHFPDSVPAAKESVVKLECFALGNP 259

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             ++S  W R S  I F S+ +   SN   L +    + D+G Y C A+
Sbjct: 260 VPEIS--WRRTSG-IPFPSKVKMKNSNAV-LEIPNLQQEDAGTYECMAE 304


>gi|338714491|ref|XP_003363091.1| PREDICTED: contactin-4 isoform 2 [Equus caballus]
          Length = 807

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 174/636 (27%), Positives = 268/636 (42%), Gaps = 69/636 (10%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P  IW + DG PI    R  + N    L I + +  D G Y C   N 
Sbjct: 24  VKLECFALGNPVPTIIWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGLYECVAENS 81

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P +  +   I+ A EE V +ECKA+G P+P   W+ NG+ +   
Sbjct: 82  RGKNVARG-QLTFYAQPNWIQKINDIHVAIEENVFWECKANGRPKPTYRWLKNGEALLT- 139

Query: 170 PPNPRRKV--GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKD 227
               R ++  G   ITI NL  SD G Y C A N  G ++    ++V+A  P+ +     
Sbjct: 140 --QERIQIEQGTLNITIVNL--SDAGMYQCVAENKHGVIFSSAELSVIALGPDFSRTLLK 195

Query: 228 EYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADSGE 284
             T+   G  VV+ C+   +PKP   W   +  L    R +I E G L+I +V  +D+G 
Sbjct: 196 RVTLVKVGGEVVIECKPKASPKPVYTWKKGRDILRENERISISEDGSLRIVNVTKSDAGS 255

Query: 285 YTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWL 344
           YTC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   W 
Sbjct: 256 YTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWS 315

Query: 345 RGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
                IDF+ +         Q +   L +       +G+Y C  QT +D + A A L V+
Sbjct: 316 FNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTTVDKLSAAADLIVR 375

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGEGS 451
            P   P   T+ ++ D   A +SW P     SP ++      Y +Q  T          +
Sbjct: 376 GPPGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFSVGWQAVNT 428

Query: 452 IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTPEG 502
           + ELI   G++ T  V    P  +   R +A N    G PS         E +  VTP  
Sbjct: 429 VPELI--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPAN 486

Query: 503 VPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI- 559
           V G   S        S   + W  V  E  NG   GY + ++       G ++  L  + 
Sbjct: 487 VSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFR-----PYGKIIWMLTVLA 534

Query: 560 -SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGS 613
            +D +    +   + P   + + +  +   G+G  S           P K P ++  R  
Sbjct: 535 SADASRYVFRNESVRPFFPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSL 594

Query: 614 TPNNLVISWTAMPEIEHNAPHFK-YRIFWRRHNTGE 648
           +  ++ + W +   IE N    + Y + + RH+  E
Sbjct: 595 SATDIEVFWAS--PIEKNRGRIQGYEVKYWRHDDKE 628



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 148/584 (25%), Positives = 218/584 (37%), Gaps = 75/584 (12%)

Query: 132 PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKS 190
           PE +  A+  TV  EC A G P P I W   +GKPI++     RR      + I N ++ 
Sbjct: 13  PETVPTAKGTTVKLECFALGNPVPTIIWRRADGKPIAR---KARRHKSNGILEIPNFQQE 69

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A NS G       +   A  P   +   D +    + V   C+  G PKP  
Sbjct: 70  DAGLYECVAENSRGKNVARGQLTFYAQ-PNWIQKINDIHVAIEENVFWECKANGRPKPTY 128

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N + L       +E G L IT V  +D+G Y C A NK G    S  L+V     I
Sbjct: 129 RWLKNGEALLTQERIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSV-----I 183

Query: 311 TDQPEDYE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
              P+           V+ G      C   + P  K    W +G + I  E+E R   S 
Sbjct: 184 ALGPDFSRTLLKRVTLVKVGGEVVIECKPKASP--KPVYTWKKGRD-ILRENE-RISISE 239

Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVS 422
           D SL +   ++ D+G YTC A        +   L V+ P       + + V   +  V+ 
Sbjct: 240 DGSLRIVNVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLP 299

Query: 423 WNPVSPQSL----RGHFRGYKVQTWTEKD------GEGSIRELIVNKGE---------ST 463
                  SL       F G+ +    + D      G+ S  +L++   +           
Sbjct: 300 CQVTHDHSLDIVFTWSFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMV 359

Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYL 522
            T VDK   A+    R         GPP    +    E    T Q S    P   S   +
Sbjct: 360 QTTVDKLSAAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITM 410

Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
             ++   P      + + +Q+V           +P + D  T +A + GL P  +Y    
Sbjct: 411 YVIQARTP------FSVGWQAVN---------TVPELIDGKTFTATVVGLNPWVEYEFRT 455

Query: 583 AGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
                 G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F 
Sbjct: 456 VAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFG 515

Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
           Y + +R +     W    +     S  V  N+    F P+E+KV
Sbjct: 516 YVVAFRPYGK-IIWMLTVLASADASRYVFRNESVRPFFPFEVKV 558



 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 23/191 (12%)

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
           RG  +GY+V+ W   D E + R+ I   G  T+T++     ++     V A+N A  GP 
Sbjct: 611 RGRIQGYEVKYWRHDDKEENARK-IRTIGNQTSTKITNLKGSALYHLAVKAYNTAGTGPS 669

Query: 492 SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
           S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 670 SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNR 725

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
            +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P    
Sbjct: 726 QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIP--KI 773

Query: 606 DNVEGRGSTPN 616
            N   RG+ P+
Sbjct: 774 SNAYARGAGPS 784


>gi|335306710|ref|XP_003360546.1| PREDICTED: neural cell adhesion molecule L1 isoform 3 [Sus scrofa]
          Length = 1248

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 140/479 (29%), Positives = 211/479 (44%), Gaps = 35/479 (7%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L + +V   D G Y 
Sbjct: 248 VALQGQPLVLECIAEGFPTPTIKWLRLSGPM-PADRVTYQNHNKTLQLLNVVEEDDGEYH 306

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G  + +   ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 307 CLAENPLGSDR-HVYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 365

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 366 IPVEELAKDQKYRIHHGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVELPAKILT 425

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
              + Y  V G T  L C+ FGAP P V W+  + +  L   R+     G L I D+   
Sbjct: 426 PDNETYMAVQGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQAN 485

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T I   P     + G    F C A  D SL+ S
Sbjct: 486 DTGHYFCQAANDQNNMTIVANLQVKDATQILQGPRSAIEKKGSRVAFTCQAYFDSSLQHS 545

Query: 341 IVW------LR--GSEPIDFESEPRFV-QSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           I W      LR  G     F  E R V  S DYS         D G Y+C A T+LD +E
Sbjct: 546 ITWRGDGQDLRELGDSDKYFIEEGRLVIHSLDYS---------DQGNYSCVASTKLDVVE 596

Query: 392 AQATLTVQVPLEAPSNFTLIQVIDAK-----KAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
           ++A L V   + +P     ++V D       +  +SW+P    +       Y ++   ++
Sbjct: 597 SRAELLV---VGSPGPVPQLEVSDQHLLRQSQVRLSWSPADDHN--APIEKYDIEFEDKE 651

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVP 504
                   L    G  T+  + K  P      RV A N    G PS    + VTPE  P
Sbjct: 652 MAPEKWYSLGKVPGNQTSATL-KLSPYVHYTFRVTAINKYGPGEPSPASETVVTPEAAP 709



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 84/186 (45%), Gaps = 9/186 (4%)

Query: 411 IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE-KDGEGSIREL----IVNKGESTTT 465
           IQ++++   +V W  + P  ++GH RGY V  W E    + S R +    +V    +T+ 
Sbjct: 816 IQILNSSTVLVRWRHLDPGQVKGHLRGYNVTYWWEGSQRKHSKRHVHKGHVVVPANATSA 875

Query: 466 EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWV 525
            +    P S     V AFNG   GP S   SF TPEGVPG  ++L       ++  L W 
Sbjct: 876 ILGGLRPYSTYHLEVQAFNGRGPGPASSR-SFSTPEGVPGHPEALHLECQSDTSLLLHWQ 934

Query: 526 KPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
            P   NGVL GY + Y  +       L   LP   DP   +  L  L P  +YR  L   
Sbjct: 935 PPLSHNGVLTGYVLSYHPLDDEGKEQLSFDLP---DPELRTHNLTNLSPHLRYRFQLQAT 991

Query: 586 TKAGDG 591
           TK G G
Sbjct: 992 TKEGPG 997



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 169/403 (41%), Gaps = 36/403 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLIIK---- 92
           ++ V      + L C   G P  Q  W++DGV   P +     +SQ  +  S  ++    
Sbjct: 38  RRVVVFPTDDISLKCEASGKPAVQFRWTRDGVHFKPKEEPGVTVSQAPHSGSFTMEGNNS 97

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
           +   S QG+Y C  SN +G A S+ I L     P +   TV+P      E E+V   C  
Sbjct: 98  NFAQSFQGTYRCFASNKLGTAMSHEIQLMAEGTPKWPKETVKPV--EVEEGESVVLPCHP 155

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+ N K I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 156 PPSAEPLRIYWM-NSK-ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 213

Query: 205 YVYK---DVYV----NVLAHAPEI---TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K   D+ V    +++   P +   T +      + G+ +VL C   G P P + W+ 
Sbjct: 214 IIQKEPIDLRVKATNSMMDRRPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 273

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++ +V   D GEY C A N LG+ +    +TV+   +   +
Sbjct: 274 LSGPMPADRVTYQNHNKTLQLLNVVEEDDGEYHCLAENPLGSDRHVYYVTVEAAPYWLHK 333

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++  ++ +  + +  +L ++    
Sbjct: 334 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELAKDQKYRIHHGALILSNVQP 391

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVPLE--APSNFTLIQV 413
            D+    C A+     + A A +  V++P +   P N T + V
Sbjct: 392 SDTMVTQCEARNRHGLLLANAYIYVVELPAKILTPDNETYMAV 434


>gi|426224675|ref|XP_004006494.1| PREDICTED: contactin-1 isoform 3 [Ovis aries]
          Length = 1007

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 185/725 (25%), Positives = 293/725 (40%), Gaps = 84/725 (11%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 230 PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 287

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 288 NIQLEDEGIYECEAENNRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 343

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG          R ++    +T EN      G Y C A N+ G +Y +
Sbjct: 344 TGKPIPTIRWLKNGYSYH------RGELRLYDVTFEN-----AGMYQCIAENTHGAIYAN 392

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+  W    + L    R  I
Sbjct: 393 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFLWSKGTERLVNSSRILI 452

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++  +D G YTCF  N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 453 WEDGSLEINNITRSDGGVYTCFVENNKGKANSTGTLVITDPTRIILAPINADITVGENAT 512

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ VW      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 513 MQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 572

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            AQT +D   A A L V+ P   P     I+ + A    ++W+  S          Y +Q
Sbjct: 573 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDVRATSVALTWSRGSDN--HSPISKYTIQ 629

Query: 442 TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           T T    D + +  +  + +G          +P  +   RV+A N    G PS   + + 
Sbjct: 630 TKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGMGEPSIPSNKIK 689

Query: 500 PEGVPGTVQSLEAIPLGSS--AFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
            +G    V   +    G S     + W  +  E   G   GY + ++   G +   +   
Sbjct: 690 TDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT-- 747

Query: 556 LPYISDPTTTS--AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS 613
              +++P T     K   + PST +++ +  +   GDG  S  L  V     D       
Sbjct: 748 ---VTNPDTGRYVHKDETMRPSTAFQVKVKAFNNKGDGPYS--LTAVIHSAQD---APSE 799

Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
            P  + +   +  EI  +  H   +I                                + 
Sbjct: 800 APTAVGVKVLSSSEISVHWEHVVEKI-------------------------------VES 828

Query: 674 YEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 733
           Y+I+    W   D E +   + V   E  +  ++  +P ++ F  V A N A  GPPS++
Sbjct: 829 YQIRY---WASHDKEAAAHRVQVASQE-YSARLENLLPDTQYFVEVRACNSAGCGPPSDM 884

Query: 734 ISFVT 738
           I   T
Sbjct: 885 IETFT 889



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 152/657 (23%), Positives = 248/657 (37%), Gaps = 85/657 (12%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 178 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTKPYPADIVV 235

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  + A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 236 QFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 292

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N+ G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 293 DEGIYECEAENNRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 351

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 352 RWLKN-----GYSY---HRGELRLYDVTFENAGMYQCIAENTHGAIYANAELKILALAPT 403

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K   +W +G+E +   S  R +   D SL 
Sbjct: 404 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKF--LWSKGTERLVNSS--RILIWEDGSLE 459

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC  +       +  TL +  P   + AP N  +    +A  +   S+
Sbjct: 460 INNITRSDGGVYTCFVENNKGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASF 519

Query: 424 NPVSPQSLRGHFRGYKVQ-----------TWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
           +P    +    F GY +               + +GE  IR   +      T      V 
Sbjct: 520 DPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVD 579

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
            S   A ++                    G PG    L    + +++  L W +    + 
Sbjct: 580 NSSASADLVV------------------RGPPGPPGGLRIEDVRATSVALTWSRGSDNHS 621

Query: 533 VLMGYKIKYQSV-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
            +  Y I+ +++     K  K  P     P I +    +A+   L P  +Y   +     
Sbjct: 622 PISKYTIQTKTILSDDWKDAKTDP-----PII-EGNMEAARAVDLIPWMEYEFRVVATNT 675

Query: 588 AGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            G G  S      K     P   P +V G G +   L I+W  +    H   +F Y + +
Sbjct: 676 LGMGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNNFGYIVAF 735

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
           +  + GE W +  V +      V  ++ T +P   +++KV     + DG  S+  +I
Sbjct: 736 KPFD-GEEWKKVTVTNPDTGRYVHKDE-TMRPSTAFQVKVKAFNNKGDGPYSLTAVI 790



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 139/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   I+  SDR S    G +L+I + +   D G Y C  S
Sbjct: 49  KVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 106

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 107 NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 160

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 161 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 217

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 218 LIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 277

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 278 STSGAVLKIFNIQLEDEGIYECEAENNRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 337

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+         E R      Y +T       ++G Y C A+ 
Sbjct: 338 YWPCVATGKPI--PTIRWLKNGYSY-HRGELRL-----YDVTFE-----NAGMYQCIAEN 384

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 385 THGAIYANAELKI 397



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   I     +    VG N +   
Sbjct: 36  PINTIYPE---ESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTS-DRYSMVGGNLVINN 91

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   +
Sbjct: 92  PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 151

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 152 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 211

Query: 299 SGSL---------TVKEH-THITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                        T K +   I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 212 FSKFIPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV--PDIRWRKVLE 269

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 270 PMPSTAE---ISTSGAVLKIFNIQLEDEGIYECEAENNRGKDKHQARIYVQ 317



 Score = 42.7 bits (99), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+    ++V+ + +  V W  V  + +      Y+++ W   D E +   + V   
Sbjct: 797 PSEAPTAVG-VKVLSSSEISVHWEHVVEKIVES----YQIRYWASHDKEAAAHRVQVASQ 851

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GPPS++I   T +  P     + +     S +
Sbjct: 852 E-YSARLENLLPDTQYFVEVRACNSAGCGPPSDMIETFTKKAPPSQPPRIISSIRSGSRY 910

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYK+ Y+
Sbjct: 911 IITWDHVVALSNESTVTGYKVLYR 934


>gi|335306708|ref|XP_003360545.1| PREDICTED: neural cell adhesion molecule L1 isoform 2 [Sus scrofa]
          Length = 1253

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 140/479 (29%), Positives = 211/479 (44%), Gaps = 35/479 (7%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L + +V   D G Y 
Sbjct: 253 VALQGQPLVLECIAEGFPTPTIKWLRLSGPM-PADRVTYQNHNKTLQLLNVVEEDDGEYH 311

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G  + +   ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 312 CLAENPLGSDR-HVYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 370

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 371 IPVEELAKDQKYRIHHGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVELPAKILT 430

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
              + Y  V G T  L C+ FGAP P V W+  + +  L   R+     G L I D+   
Sbjct: 431 PDNETYMAVQGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQAN 490

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T I   P     + G    F C A  D SL+ S
Sbjct: 491 DTGHYFCQAANDQNNMTIVANLQVKDATQILQGPRSAIEKKGSRVAFTCQAYFDSSLQHS 550

Query: 341 IVW------LR--GSEPIDFESEPRFV-QSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           I W      LR  G     F  E R V  S DYS         D G Y+C A T+LD +E
Sbjct: 551 ITWRGDGQDLRELGDSDKYFIEEGRLVIHSLDYS---------DQGNYSCVASTKLDVVE 601

Query: 392 AQATLTVQVPLEAPSNFTLIQVIDAK-----KAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
           ++A L V   + +P     ++V D       +  +SW+P    +       Y ++   ++
Sbjct: 602 SRAELLV---VGSPGPVPQLEVSDQHLLRQSQVRLSWSPADDHN--APIEKYDIEFEDKE 656

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVP 504
                   L    G  T+  + K  P      RV A N    G PS    + VTPE  P
Sbjct: 657 MAPEKWYSLGKVPGNQTSATL-KLSPYVHYTFRVTAINKYGPGEPSPASETVVTPEAAP 714



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 84/186 (45%), Gaps = 9/186 (4%)

Query: 411  IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE-KDGEGSIREL----IVNKGESTTT 465
            IQ++++   +V W  + P  ++GH RGY V  W E    + S R +    +V    +T+ 
Sbjct: 821  IQILNSSTVLVRWRHLDPGQVKGHLRGYNVTYWWEGSQRKHSKRHVHKGHVVVPANATSA 880

Query: 466  EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWV 525
             +    P S     V AFNG   GP S   SF TPEGVPG  ++L       ++  L W 
Sbjct: 881  ILGGLRPYSTYHLEVQAFNGRGPGPASSR-SFSTPEGVPGHPEALHLECQSDTSLLLHWQ 939

Query: 526  KPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
             P   NGVL GY + Y  +       L   LP   DP   +  L  L P  +YR  L   
Sbjct: 940  PPLSHNGVLTGYVLSYHPLDDEGKEQLSFDLP---DPELRTHNLTNLSPHLRYRFQLQAT 996

Query: 586  TKAGDG 591
            TK G G
Sbjct: 997  TKEGPG 1002



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 169/403 (41%), Gaps = 36/403 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLIIK---- 92
           ++ V      + L C   G P  Q  W++DGV   P +     +SQ  +  S  ++    
Sbjct: 43  RRVVVFPTDDISLKCEASGKPAVQFRWTRDGVHFKPKEEPGVTVSQAPHSGSFTMEGNNS 102

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
           +   S QG+Y C  SN +G A S+ I L     P +   TV+P      E E+V   C  
Sbjct: 103 NFAQSFQGTYRCFASNKLGTAMSHEIQLMAEGTPKWPKETVKPV--EVEEGESVVLPCHP 160

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+ N K I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 161 PPSAEPLRIYWM-NSK-ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 218

Query: 205 YVYK---DVYV----NVLAHAPEI---TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K   D+ V    +++   P +   T +      + G+ +VL C   G P P + W+ 
Sbjct: 219 IIQKEPIDLRVKATNSMMDRRPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 278

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++ +V   D GEY C A N LG+ +    +TV+   +   +
Sbjct: 279 LSGPMPADRVTYQNHNKTLQLLNVVEEDDGEYHCLAENPLGSDRHVYYVTVEAAPYWLHK 338

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++  ++ +  + +  +L ++    
Sbjct: 339 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELAKDQKYRIHHGALILSNVQP 396

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVPLE--APSNFTLIQV 413
            D+    C A+     + A A +  V++P +   P N T + V
Sbjct: 397 SDTMVTQCEARNRHGLLLANAYIYVVELPAKILTPDNETYMAV 439


>gi|6981632|ref|NP_037016.1| contactin-2 precursor [Rattus norvegicus]
 gi|114736|sp|P22063.1|CNTN2_RAT RecName: Full=Contactin-2; AltName: Full=Axonal glycoprotein TAG-1;
           AltName: Full=Axonin-1; AltName: Full=Transient axonal
           glycoprotein 1; Short=TAX-1; Flags: Precursor
 gi|207149|gb|AAA42201.1| axonal glycoprotein (TAG-1) precursor [Rattus norvegicus]
          Length = 1040

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 171/629 (27%), Positives = 274/629 (43%), Gaps = 57/629 (9%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 253 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWATAE----PTLQIPSVSFEDEGTYEC 308

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           E  N  G   +    + V A P +        A     + + C A+G P P + W+ NG+
Sbjct: 309 EAENSKGR-DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPMVRWLRNGE 367

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           P++      R +V    +    L   D+G Y C A N  G +Y    + V A AP+  + 
Sbjct: 368 PLAS---QNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRQN 424

Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P         G  + + C+   APK  + W    + L    R T+   G L I +++ +D
Sbjct: 425 PVRRLIPAARGGEISILCQPRAAPKATILWSKGTEILGNSTRVTVTSDGTLIIRNISRSD 484

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP++ L+ 
Sbjct: 485 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGDNLTLQCHASHDPTMDLTF 544

Query: 342 VWLRGSEPIDFE---SEPRFVQSNDY--SLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W     PIDF+      R   + +    LT+  +     G+YTC AQT +D    +AT+
Sbjct: 545 TWTLDDFPIDFDKPGGHYRRASAKETIGDLTILNAHVRHGGKYTCMAQTVVDGTSKEATV 604

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GSIR 453
            V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G+   +R
Sbjct: 605 LVRGPPGPPGGVVVRDIGDT-TVQLSWS----RGFDNHSPIAKYTLQARTPPSGKWKQVR 659

Query: 454 ELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGVPGTVQ 508
              VN +G + T +V   +P      RV A N    G  +GP S+I    T E VP    
Sbjct: 660 TNPVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSKI---RTKEAVPSVAP 716

Query: 509 SLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQ-----SVKGTKV-GPLLERLPYI 559
           S  +   G+     + W  V  E  NG   GY + ++     S +  +V G   +   Y 
Sbjct: 717 SGLSGGGGAPGELIINWTPVSREYQNGDGFGYLLSFRRQGSSSWQTARVPGADAQYFVYG 776

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGST 614
           +D          ++P T + + +  Y + GDG ES   L Y     P   P  V  +GS+
Sbjct: 777 ND---------SIQPYTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPAKVWAKGSS 827

Query: 615 PNNLVISWTAMPEIEHNAPHFKYRI-FWR 642
            + + +SW  + + + N     Y I +W+
Sbjct: 828 SSEMNVSWEPVLQ-DMNGILLGYEIRYWK 855



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 145/374 (38%), Gaps = 38/374 (10%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN--PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           +V L C    +P     W  +G  +N  P  R  Q   G  +I+   +  D G Y C  S
Sbjct: 58  QVTLACRARASPPATYRWKMNGTDMNLEPGSR-HQLMGGNLVIMSPTKTQDAGVYQCLAS 116

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIH-------W 159
           N VG   S    L       F    EF     +   T E     LP  P  H       W
Sbjct: 117 NPVGTVVSKEAVLR------FGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYRW 170

Query: 160 VHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY-----V 212
           + N  P +  P + R  V      + I     SD GNY C AT+ + +  K V+     +
Sbjct: 171 LLNEFP-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQL 229

Query: 213 NVLAHAPEI------TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
           N+ A  P +         P + Y + G+ V L C  FG P P + W      L+    T 
Sbjct: 230 NLAAEDPRLFAPSIKARFPPETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWATA 289

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
             T  L+I  V+F D G Y C A N  G     G + V+          D E + G +  
Sbjct: 290 EPT--LQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNLR 347

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + C A   P  +  + WLR  EP+  ++    +  +   L  +K S  DSG Y C A+ +
Sbjct: 348 WGCAAAGKP--RPMVRWLRNGEPLASQNRVEVLAGD---LRFSKLSLEDSGMYQCVAENK 402

Query: 387 LDFIEAQATLTVQV 400
              I A A L VQ 
Sbjct: 403 HGTIYASAELAVQA 416



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 153/655 (23%), Positives = 241/655 (36%), Gaps = 77/655 (11%)

Query: 88  SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
           +L I     SD G+Y+C      + S     +K   ++L+     L AP      P    
Sbjct: 193 NLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPPETY 252

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + VT EC A G P P I W      +S     P+       + I ++   D G Y 
Sbjct: 253 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-----PQWATAEPTLQIPSVSFEDEGTYE 307

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V A  PE  +   D     G  +   C   G P+P V W+ N 
Sbjct: 308 CEAENSKGRDTVQGRIIVQAQ-PEWLKVISDTEADIGSNLRWGCAAAGKPRPMVRWLRNG 366

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
           + L       +  GDL+ + ++  DSG Y C A NK GT   S  L V+         P 
Sbjct: 367 EPLASQNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRQNPV 426

Query: 316 DYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
              + A  G   +  C   + P  K +I+W +G+E +   +  R   ++D +L +   S 
Sbjct: 427 RRLIPAARGGEISILCQPRAAP--KATILWSKGTEILGNST--RVTVTSDGTLIIRNISR 482

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APS--------NFTLIQVIDAKKAVV- 421
            D G+YTC A+  +    +   L+V+   +   APS        N TL Q   +    + 
Sbjct: 483 SDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGDNLTL-QCHASHDPTMD 541

Query: 422 ---SWN----PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
              +W     P+      GH+R    +   E  G+ +I    V  G   T      V  +
Sbjct: 542 LTFTWTLDDFPIDFDKPGGHYRRASAK---ETIGDLTILNAHVRHGGKYTCMAQTVVDGT 598

Query: 475 KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
              A VL                            +    +G +   L W +    +  +
Sbjct: 599 SKEATVLVRGPPG------------------PPGGVVVRDIGDTTVQLSWSRGFDNHSPI 640

Query: 535 MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
             Y ++ ++    K   +    P   +    +A++ GL P   Y   ++     G G  S
Sbjct: 641 AKYTLQARTPPSGKWKQVRTN-PVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPS 699

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P  + G G  P  L+I+WT +     N   F Y + +RR  +  
Sbjct: 700 GPSSKIRTKEAVPSVAPSGLSGGGGAPGELIINWTPVSREYQNGDGFGYLLSFRRQGS-S 758

Query: 649 AWNQDDVLDWRQSELVLAN---QPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
           +W    V        V  N   QP + P+E+K+       DG  S+  L+ +  E
Sbjct: 759 SWQTARVPGADAQYFVYGNDSIQP-YTPFEVKIRSYNRRGDGPESLTALVYSAEE 812



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 142/607 (23%), Positives = 228/607 (37%), Gaps = 70/607 (11%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P+   +R+        L    +   D G Y C   N  G   
Sbjct: 350 CAAAGKPRPMVRWLRNGEPLASQNRVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTIY 407

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F   P    I AA    ++  C+    P+  I W    + +  +  
Sbjct: 408 A-SAELAVQALAPDFRQNPVRRLIPAARGGEISILCQPRAAPKATILWSKGTEILGNST- 465

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V  +  + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 466 --RVTVTSDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 522

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G  + L C     P  ++ +     +        GG Y   +  ET GDL I +    
Sbjct: 523 NVGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRASAKETIGDLTILNAHVR 582

Query: 281 DSGEYTCFARNKL-GTAQGSGSLTVKEHTHITDQPE----DYEVEAGQS---------AT 326
             G+YTC A+  + GT++ +  L                 D  V+   S         A 
Sbjct: 583 HGGKYTCMAQTVVDGTSKEATVLVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAK 642

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQYT 380
           +   A + PS K   V    + P++ E      Q        DY   V+ S+ L +G+ +
Sbjct: 643 YTLQARTPPSGKWKQV---RTNPVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPS 699

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
               +++   EA  ++                     + +++W PVS +   G   GY +
Sbjct: 700 G-PSSKIRTKEAVPSVAPSG--------LSGGGGAPGELIINWTPVSREYQNGDGFGYLL 750

Query: 441 QTWTEKDGEGSIRELIVNKGEST--TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
                + G  S +   V   ++       D   P +    ++ ++N   +GP S      
Sbjct: 751 SF--RRQGSSSWQTARVPGADAQYFVYGNDSIQPYTPFEVKIRSYNRRGDGPESLTALVY 808

Query: 499 TPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKGTKVGPLLERL 556
           + E  P    + + A    SS   + W    Q  NG+L+GY+I+Y      +      R 
Sbjct: 809 SAEEEPRVAPAKVWAKGSSSSEMNVSWEPVLQDMNGILLGYEIRYWKAGDNEAAADRVRT 868

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPN 616
             +     TSA++ GL P+TKY + +  Y +AG G  S     +  K P         P 
Sbjct: 869 AGLD----TSARVTGLNPNTKYHVTVRAYNRAGTGPASPSADAMTVKPPPR-----RPPG 919

Query: 617 NLVISWT 623
           N  ISWT
Sbjct: 920 N--ISWT 924



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 116/298 (38%), Gaps = 30/298 (10%)

Query: 125 APYFTVEP---EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P F  +P    F   + E+ VT  C+A   P     W  NG  ++  P +  + +G N 
Sbjct: 38  GPIFEEQPIGLLFPEESAEDQVTLACRARASPPATYRWKMNGTDMNLEPGSRHQLMGGNL 97

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTC 240
           + +   +  D G Y C A+N +G V     V       E ++  +D   T +G  V+L C
Sbjct: 98  VIMSPTKTQDAGVYQCLASNPVGTVVSKEAVLRFGFLQEFSKEERDPVKTHEGWGVMLPC 157

Query: 241 RVFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGT 295
                 P     W+ N+      T GR+ + + TG+L I     +D G Y+C A + +  
Sbjct: 158 NPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDF 217

Query: 296 AQGSGSLTVKEHTHITDQ-------------PEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           +  S      +     +              PE Y +  GQ  T  C A  +P  +  I 
Sbjct: 218 STKSVFSKFAQLNLAAEDPRLFAPSIKARFPPETYAL-VGQQVTLECFAFGNPVPR--IK 274

Query: 343 WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           W +    +D    P++  + + +L +   S  D G Y C A+        Q  + VQ 
Sbjct: 275 WRK----VDGSLSPQWATA-EPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQA 327



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 81/185 (43%), Gaps = 9/185 (4%)

Query: 35  QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV 94
           +Q   R+   A R  ++ + C     P    +WSK    +  S R++  + G +LII+++
Sbjct: 422 RQNPVRRLIPAARGGEISILCQPRAAPKATILWSKGTEILGNSTRVTVTSDG-TLIIRNI 480

Query: 95  EFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPE 154
             SD+G YTC   N +G+A S  I LSV  A   T+ P   +    + +T +C AS  P 
Sbjct: 481 SRSDEGKYTCFAENFMGKANSTGI-LSVRDATKITLAPSSADINVGDNLTLQCHASHDPT 539

Query: 155 PEI--HWVHNGKPISQAPP--NPRRKVGPNRI---TIENLRKSDTGNYGCNATNSLGYVY 207
            ++   W  +  PI    P  + RR      I   TI N      G Y C A   +    
Sbjct: 540 MDLTFTWTLDDFPIDFDKPGGHYRRASAKETIGDLTILNAHVRHGGKYTCMAQTVVDGTS 599

Query: 208 KDVYV 212
           K+  V
Sbjct: 600 KEATV 604


>gi|335306706|ref|XP_003135542.2| PREDICTED: neural cell adhesion molecule L1 isoform 1 [Sus scrofa]
          Length = 1257

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 140/479 (29%), Positives = 211/479 (44%), Gaps = 35/479 (7%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L + +V   D G Y 
Sbjct: 253 VALQGQPLVLECIAEGFPTPTIKWLRLSGPM-PADRVTYQNHNKTLQLLNVVEEDDGEYH 311

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G  + +   ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 312 CLAENPLGSDR-HVYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 370

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N++ SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 371 IPVEELAKDQKYRIHHGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVELPAKILT 430

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
              + Y  V G T  L C+ FGAP P V W+  + +  L   R+     G L I D+   
Sbjct: 431 PDNETYMAVQGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQAN 490

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T I   P     + G    F C A  D SL+ S
Sbjct: 491 DTGHYFCQAANDQNNMTIVANLQVKDATQILQGPRSAIEKKGSRVAFTCQAYFDSSLQHS 550

Query: 341 IVW------LR--GSEPIDFESEPRFV-QSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           I W      LR  G     F  E R V  S DYS         D G Y+C A T+LD +E
Sbjct: 551 ITWRGDGQDLRELGDSDKYFIEEGRLVIHSLDYS---------DQGNYSCVASTKLDVVE 601

Query: 392 AQATLTVQVPLEAPSNFTLIQVIDAK-----KAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
           ++A L V   + +P     ++V D       +  +SW+P    +       Y ++   ++
Sbjct: 602 SRAELLV---VGSPGPVPQLEVSDQHLLRQSQVRLSWSPADDHN--APIEKYDIEFEDKE 656

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVP 504
                   L    G  T+  + K  P      RV A N    G PS    + VTPE  P
Sbjct: 657 MAPEKWYSLGKVPGNQTSATL-KLSPYVHYTFRVTAINKYGPGEPSPASETVVTPEAAP 714



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 84/186 (45%), Gaps = 9/186 (4%)

Query: 411  IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE-KDGEGSIREL----IVNKGESTTT 465
            IQ++++   +V W  + P  ++GH RGY V  W E    + S R +    +V    +T+ 
Sbjct: 821  IQILNSSTVLVRWRHLDPGQVKGHLRGYNVTYWWEGSQRKHSKRHVHKGHVVVPANATSA 880

Query: 466  EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWV 525
             +    P S     V AFNG   GP S   SF TPEGVPG  ++L       ++  L W 
Sbjct: 881  ILGGLRPYSTYHLEVQAFNGRGPGPASSR-SFSTPEGVPGHPEALHLECQSDTSLLLHWQ 939

Query: 526  KPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
             P   NGVL GY + Y  +       L   LP   DP   +  L  L P  +YR  L   
Sbjct: 940  PPLSHNGVLTGYVLSYHPLDDEGKEQLSFDLP---DPELRTHNLTNLSPHLRYRFQLQAT 996

Query: 586  TKAGDG 591
            TK G G
Sbjct: 997  TKEGPG 1002



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 169/403 (41%), Gaps = 36/403 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLIIK---- 92
           ++ V      + L C   G P  Q  W++DGV   P +     +SQ  +  S  ++    
Sbjct: 43  RRVVVFPTDDISLKCEASGKPAVQFRWTRDGVHFKPKEEPGVTVSQAPHSGSFTMEGNNS 102

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
           +   S QG+Y C  SN +G A S+ I L     P +   TV+P      E E+V   C  
Sbjct: 103 NFAQSFQGTYRCFASNKLGTAMSHEIQLMAEGTPKWPKETVKPV--EVEEGESVVLPCHP 160

Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
               EP  I+W+ N K I     + R  +G N  +   N+  SD   +Y C+A    +  
Sbjct: 161 PPSAEPLRIYWM-NSK-ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 218

Query: 205 YVYK---DVYV----NVLAHAPEI---TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
            + K   D+ V    +++   P +   T +      + G+ +VL C   G P P + W+ 
Sbjct: 219 IIQKEPIDLRVKATNSMMDRRPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 278

Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
               +   R T       L++ +V   D GEY C A N LG+ +    +TV+   +   +
Sbjct: 279 LSGPMPADRVTYQNHNKTLQLLNVVEEDDGEYHCLAENPLGSDRHVYYVTVEAAPYWLHK 338

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           P+ +    G++A   C     P  +  + W     P++  ++ +  + +  +L ++    
Sbjct: 339 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELAKDQKYRIHHGALILSNVQP 396

Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVPLE--APSNFTLIQV 413
            D+    C A+     + A A +  V++P +   P N T + V
Sbjct: 397 SDTMVTQCEARNRHGLLLANAYIYVVELPAKILTPDNETYMAV 439


>gi|26331270|dbj|BAC29365.1| unnamed protein product [Mus musculus]
          Length = 705

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 183/394 (46%), Gaps = 24/394 (6%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+P  +W + DG PI    R  + N    L I + +  D GSY 
Sbjct: 237 AEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGSYE 294

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+       L+  A P +      I+ A EE+V +ECKA+G P+P   W+ NG
Sbjct: 295 CVAENSRGK-NVVKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNG 353

Query: 164 KPISQAPPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
            P+       R ++    G   ITI NL  SD G Y C A N  G ++    ++V+A +P
Sbjct: 354 DPLLT-----RDRIQIEQGTLNITIVNL--SDAGMYQCVAENKHGVIFSSAELSVIAESP 406

Query: 220 EITEAPKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITD 276
           + +       T+   G  VV+ C+   +P+P   W   ++ L    R TI E G+L+I +
Sbjct: 407 DFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIIN 466

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
           V  +D+G YTC A N  GTA  +G++ VK+ T +   P   +V  G+S    C    D S
Sbjct: 467 VTKSDAGSYTCIATNHFGTASSTGNVIVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHS 526

Query: 337 LKLSIVWLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           L +   W      IDF+ +         Q +   L +       +G+Y C  QT +D + 
Sbjct: 527 LDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLS 586

Query: 392 AQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
             A L V+ P   P   T+ ++ D   A +SW P
Sbjct: 587 VAADLIVRGPPGPPEAVTIDEITDT-TAQLSWRP 619



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 141/335 (42%), Gaps = 36/335 (10%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V+ PE + A
Sbjct: 178 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPA 237

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
            +  TV  EC A G P P I W   +GKPI++     RR      + I N ++ D G+Y 
Sbjct: 238 EKGTTVKLECFALGNPVPTILWRRADGKPIAR---KARRHKSNGILEIPNFQQEDAGSYE 294

Query: 197 CNATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           C A NS G   K+V    L     P   +   D +    ++V   C+  G PKP   W+ 
Sbjct: 295 CVAENSRG---KNVVKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLK 351

Query: 255 NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
           N   L       +E G L IT V  +D+G Y C A NK G    S  L+V     I + P
Sbjct: 352 NGDPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSV-----IAESP 406

Query: 315 EDYE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
           +           V+ G      C   + P  +    W +G E I  E+E R   S D +L
Sbjct: 407 DFSRTLLKRVTLVKVGGEVVIECKPKASP--RPVYTWRKGRE-ILRENE-RITISEDGNL 462

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            +   ++ D+G YTC A        +   + V+ P
Sbjct: 463 RIINVTKSDAGSYTCIATNHFGTASSTGNVIVKDP 497



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 141/369 (38%), Gaps = 30/369 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  ++            SL+I +  +  D G+Y C  +
Sbjct: 44  KKVKLSCEVKGNPKPHIRWKINGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQCIAT 103

Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVHN 162
           N  G   S    L       F T     ++    + +   C   G P    E    W+ N
Sbjct: 104 NSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLC---GPPPHSGELSYAWIFN 160

Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN- 213
             P  Q   + RR V      + I  + KSD GNY C  TN+      LG     +  N 
Sbjct: 161 EYPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRND 217

Query: 214 --VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILET 269
             +  + P+I  + P+      G TV L C   G P P + W   + K +          
Sbjct: 218 GVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSN 277

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I +    D+G Y C A N  G     G LT     +      D  V   +S  + C
Sbjct: 278 GILEIPNFQQEDAGSYECVAENSRGKNVVKGQLTFYAQPNWVQIINDIHVAMEESVFWEC 337

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   P  K +  WL+  +P+        +Q    +L +T  +  D+G Y C A+ +   
Sbjct: 338 KANGRP--KPTYRWLKNGDPLLTRDR---IQIEQGTLNITIVNLSDAGMYQCVAENKHGV 392

Query: 390 IEAQATLTV 398
           I + A L+V
Sbjct: 393 IFSSAELSV 401



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 119/307 (38%), Gaps = 36/307 (11%)

Query: 119 DLSVLAAPYFTVEPEFIN---AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D   L  P F  EP  +     +EE+ V   C+  G P+P I W  NG  +     + R 
Sbjct: 19  DDYTLHGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKINGTDVDIG-MDFRY 77

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            V    + I N  K+ D G Y C ATNS G +         A+        +   +V  G
Sbjct: 78  SVVDGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRG 137

Query: 234 KTVVLTCRVFGAPKPEVN-----WIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYT 286
           + +VL C     P P        WI N+        R+   ETG+L I  V  +D G YT
Sbjct: 138 QGMVLLC----GPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYT 193

Query: 287 CFARNK------LG-----TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           C   N       LG       +  G +   E       PE    E G +    C A+ +P
Sbjct: 194 CVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNP 253

Query: 336 SLKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL--DFIEA 392
               +I+W R   +PI    + R  +SN   L +    + D+G Y C A+     + ++ 
Sbjct: 254 V--PTILWRRADGKPI--ARKARRHKSNGI-LEIPNFQQEDAGSYECVAENSRGKNVVKG 308

Query: 393 QATLTVQ 399
           Q T   Q
Sbjct: 309 QLTFYAQ 315


>gi|338714572|ref|XP_001497209.2| PREDICTED: contactin-6 [Equus caballus]
          Length = 1030

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 183/722 (25%), Positives = 300/722 (41%), Gaps = 90/722 (12%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+P   W + DG P+    + S+      L I + +  D+G Y 
Sbjct: 240 AAKGSSVKLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQ--AILEIPNFQQEDEGFYE 297

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G   +    L   A P +  + +    +  +++ +ECKA G P P   W+ NG
Sbjct: 298 CIAGNLRGRNLAKG-QLIFYALPEWEQKIQNTYLSIYDSLLWECKARGKPNPWYTWLKNG 356

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + +S   P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 357 ERLS---PEERIQIENGTLIITMLNLSDSGVYQCAAENKYQIIYANAELRVLASAPDFSK 413

Query: 224 AP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
            P  K+     G  + + C+    P+  ++W    + L    R ++LE G LKI +V  +
Sbjct: 414 NPIKKNSVVQVGGDIAIECKPIAFPRAAISWKRRAESLKQSKRVSLLEDGSLKIYNVTRS 473

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A+ +GSL VKE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 474 DAGSYTCIATNQFGVARNTGSLVVKERTIITLPPSKMDVTVGESIVLPCQVSHDPSIEVV 533

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            VW    + ID +       R    +   L +       SG+Y C  +T L+ + A A +
Sbjct: 534 FVWSFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAAADI 593

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW P S  +     + + VQ  T          ++
Sbjct: 594 IVRGP-PGPPDDVRVEHISSTTSQLSWRPGSDNN--SPIQIFTVQARTPFSVGWQAVSTV 650

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE---------IISFVTPEGV 503
            E++   G++    V    P  +   RV+A N    G PS+          +  V P  +
Sbjct: 651 PEIL--SGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPTNI 708

Query: 504 PGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
            G   S        S   + W  +  E  NG   GY I  + V  T    + ER+P + +
Sbjct: 709 NGGGGS-------RSELVITWESIPEELQNGEEFGYIIMLRPVGSTTW--IKERVPSV-E 758

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS-----TPN 616
            +    +   + P + + + +  Y K G+G+ S        ++   +  RG+     + +
Sbjct: 759 SSRFVYRNESIIPLSPFEVKVGVYNKEGEGSLSTVSIVYSGEDEPQLAPRGTSVQSFSAS 818

Query: 617 NLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEI 676
            + +SW A+                       AWN       R +  VL        YE 
Sbjct: 819 EMEVSWNAI-----------------------AWN-------RNTGRVLG-------YE- 840

Query: 677 KVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 736
             V  WT+   E  I +  V+ G  TT  +      +  FA V A+N A  GP S  ++ 
Sbjct: 841 --VLYWTDDSKESMIGKTRVS-GNVTTKNITGLKANTVYFASVRAYNTAGTGPSSPPVNV 897

Query: 737 VT 738
            T
Sbjct: 898 TT 899



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 164/660 (24%), Positives = 255/660 (38%), Gaps = 87/660 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC ++N   EA+      SV   P   V+                
Sbjct: 181 NLYIAKVEPSDVGNYTCFITN--KEAQK-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 233

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA+  +V  EC A G P P+I W   +G P+   P   +       + I N ++
Sbjct: 234 FPETIQAAKGSSVKLECFALGNPVPDISWRRLDGSPL---PGKVKYSKSQAILEIPNFQQ 290

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A N  G       + +    PE  +  ++ Y     +++  C+  G P P 
Sbjct: 291 EDEGFYECIAGNLRGRNLAKGQL-IFYALPEWEQKIQNTYLSIYDSLLWECKARGKPNPW 349

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L+      +E G L IT +  +DSG Y C A NK      +  L V     
Sbjct: 350 YTWLKNGERLSPEERIQIENGTLIITMLNLSDSGVYQCAAENKYQIIYANAELRVLASAP 409

Query: 309 HITDQP--EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P  ++  V+ G      C  ++ P  + +I W R +E    +   R     D SL
Sbjct: 410 DFSKNPIKKNSVVQVGGDIAIECKPIAFP--RAAISWKRRAE--SLKQSKRVSLLEDGSL 465

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV------ 420
            +   +  D+G YTC A  +        +L V+         T+I +  +K  V      
Sbjct: 466 KIYNVTRSDAGSYTCIATNQFGVARNTGSLVVK-------ERTIITLPPSKMDVTVGESI 518

Query: 421 -----VSWNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKF 470
                VS +P         F G  +         E+ G  S+ +L++   +       K+
Sbjct: 519 VLPCQVSHDPSIEVVFVWSFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQ--LNHSGKY 576

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
           +   K     L+         ++II      G PG    +    + S+   L W      
Sbjct: 577 LCTVKTTLESLS-------AAADIIV----RGPPGPPDDVRVEHISSTTSQLSWRPGSDN 625

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           N  +  + +  Q+     VG   +  +P I    T +A + GL P  +Y   +      G
Sbjct: 626 NSPIQIFTV--QARTPFSVGWQAVSTVPEILSGKTYNATVVGLSPWVEYEFRVVAGNSIG 683

Query: 590 DGAESK------YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  SK          VP   P N+ G G + + LVI+W ++PE   N   F Y I  R 
Sbjct: 684 IGEPSKPSELLRTKASVPVVAPTNINGGGGSRSELVITWESIPEELQNGEEFGYIIMLRP 743

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
             +   W ++ V     S  V  N+      P+E+KV      K+GEGS+  + IV  GE
Sbjct: 744 VGS-TTWIKERVPSVESSRFVYRNESIIPLSPFEVKV--GVYNKEGEGSLSTVSIVYSGE 800



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 150/638 (23%), Positives = 245/638 (38%), Gaps = 79/638 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  ++P +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 340 CKARGKPNPWYTWLKNGERLSPEERIQIEN--GTLIITMLNLSDSGVYQCAAENKY-QII 396

Query: 115 SYSIDLSVLA-APYFTVEPEFINAAEE--ETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
             + +L VLA AP F+  P   N+  +    +  ECK    P   I W    + + Q+  
Sbjct: 397 YANAELRVLASAPDFSKNPIKKNSVVQVGGDIAIECKPIAFPRAAISWKRRAESLKQSKR 456

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
               + G   + I N+ +SD G+Y C ATN  G V ++    V+     IT  P      
Sbjct: 457 VSLLEDG--SLKIYNVTRSDAGSYTCIATNQFG-VARNTGSLVVKERTIITLPPSKMDVT 513

Query: 232 DGKTVVLTCRVFGAPKPEVN--WIHN-----------QKELTGGRYTILETGDLKITDVA 278
            G+++VL C+V   P  EV   W  N             E  GG       GDL I ++ 
Sbjct: 514 VGESIVLPCQVSHDPSIEVVFVWSFNGDVIDLKKGVAHFERIGGE----SVGDLMIRNIQ 569

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSDPS 336
              SG+Y C  +  L +   +  + V+        P+D  VE   S T + +    SD +
Sbjct: 570 LNHSGKYLCTVKTTLESLSAAADIIVRGPP---GPPDDVRVEHISSTTSQLSWRPGSDNN 626

Query: 337 LKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
             + I  ++   P         + P  +    Y+ TV   S     ++   A   +   E
Sbjct: 627 SPIQIFTVQARTPFSVGWQAVSTVPEILSGKTYNATVVGLSPWVEYEFRVVAGNSIGIGE 686

Query: 392 AQA-----TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ----- 441
                        VP+ AP+N          + V++W  +  +   G   GY +      
Sbjct: 687 PSKPSELLRTKASVPVVAPTNINGGGG-SRSELVITWESIPEELQNGEEFGYIIMLRPVG 745

Query: 442 --TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
             TW ++          V + ES        +P S    +V  +N    G  S +    +
Sbjct: 746 STTWIKERVPSVESSRFVYRNES-------IIPLSPFEVKVGVYNKEGEGSLSTVSIVYS 798

Query: 500 PEGVP------GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKVGP 551
            E  P       +VQS  A  +  S   + W    +  G ++GY++ Y     K + +G 
Sbjct: 799 GEDEPQLAPRGTSVQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDSKESMIGK 855

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPD 606
                  +S   TT   + GL+ +T Y   +  Y  AG G  S  +        P + P 
Sbjct: 856 T-----RVSGNVTTK-NITGLKANTVYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPA 909

Query: 607 NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           N+  +  T + L ++W  +  +E+ +    Y+I +R++
Sbjct: 910 NIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQN 946



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 106/287 (36%), Gaps = 32/287 (11%)

Query: 121 SVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
           S L+ P FT EP+   F        +   C A G P P   W  NG+ I        R  
Sbjct: 22  SRLSRPIFTQEPQDVIFPLELSNSEIILNCAADGYPSPHYRWKQNGRDIDFTMSYHYRLD 81

Query: 178 GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTV 236
           G +          D G Y C ATN LG +         A+  +     +   +V +G+ V
Sbjct: 82  GGSLAISSPQTDQDIGTYQCLATNPLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGV 141

Query: 237 VLTCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTC 287
           VL C     P P        W  N   L       R+   ETG+L I  V  +D G YTC
Sbjct: 142 VLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTC 197

Query: 288 FARNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPS 336
           F  NK    + QG  +  V+    +  +         PE  +   G S    C A+ +P 
Sbjct: 198 FITNKEAQKSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKGSSVKLECFALGNPV 257

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
             +S   L GS       + ++ +S    L +    + D G Y C A
Sbjct: 258 PDISWRRLDGSP---LPGKVKYSKSQAI-LEIPNFQQEDEGFYECIA 300



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 93/381 (24%), Positives = 136/381 (35%), Gaps = 42/381 (11%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS-DQGSY 102
           + L N ++ L C   G P P   W ++G  I+ +        G SL I   +   D G+Y
Sbjct: 40  LELSNSEIILNCAADGYPSPHYRWKQNGRDIDFTMSYHYRLDGGSLAISSPQTDQDIGTY 99

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPEI---- 157
            C  +N +G   S    L       F T     ++  E + V   C     P P      
Sbjct: 100 QCLATNPLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCG----PPPHFGDLS 155

Query: 158 -HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY--------- 205
             W  N  P+     N RR V      + I  +  SD GNY C  TN             
Sbjct: 156 YAWTFNDNPLYVQEDN-RRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQKSVQGPPTP 214

Query: 206 -------VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQK 257
                  V  +    +    PE  +A K      G +V L C   G P P+++W   +  
Sbjct: 215 LVQRTDGVMGEYEPKIEVRFPETIQAAK------GSSVKLECFALGNPVPDISWRRLDGS 268

Query: 258 ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDY 317
            L G          L+I +    D G Y C A N  G     G L          + ++ 
Sbjct: 269 PLPGKVKYSKSQAILEIPNFQQEDEGFYECIAGNLRGRNLAKGQLIFYALPEWEQKIQNT 328

Query: 318 EVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSG 377
            +    S  + C A   P+   +  WL+  E +  E     +Q  + +L +T  +  DSG
Sbjct: 329 YLSIYDSLLWECKARGKPNPWYT--WLKNGERLSPEER---IQIENGTLIITMLNLSDSG 383

Query: 378 QYTCRAQTELDFIEAQATLTV 398
            Y C A+ +   I A A L V
Sbjct: 384 VYQCAAENKYQIIYANAELRV 404



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 85/190 (44%), Gaps = 14/190 (7%)

Query: 409 TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
           T +Q   A +  VSWN ++     G   GY+V  WT+   E  I +  V+ G  TT  + 
Sbjct: 810 TSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKTRVS-GNVTTKNIT 868

Query: 469 KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VK 526
                +  FA V A+N A  GP S  ++  T +  P    +  A  L +S   L W  VK
Sbjct: 869 GLKANTVYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLTNSKLCLNWEHVK 928

Query: 527 PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGY 585
             +    ++GYKI Y+  + +K         +I +   TSA+L  L P    Y I +   
Sbjct: 929 TMENESEVLGYKILYRQNRQSKT--------HILETNNTSAEL--LVPFEEDYLIEIRTV 978

Query: 586 TKAGDGAESK 595
           +  GDG+ S+
Sbjct: 979 SDGGDGSSSE 988


>gi|296487720|tpg|DAA29833.1| TPA: contactin-1 precursor [Bos taurus]
          Length = 1018

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 186/723 (25%), Positives = 289/723 (39%), Gaps = 80/723 (11%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 241 PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 298

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 299 NIQLEDEGIYECEAENNRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 354

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG          R ++    +T EN      G Y C A N+ G +Y +
Sbjct: 355 TGKPIPTIRWLKNGYSYH------RGELRLYDVTFEN-----AGMYQCIAENTHGAIYAN 403

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP   W    + L    R  I
Sbjct: 404 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPTFLWSKGTERLVNSSRILI 463

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++  +D G YTCF  N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 464 WEDGSLEINNITRSDGGVYTCFVENNKGKANSTGTLVITDPTRIILAPINADITVGENAT 523

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ VW      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 524 MQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 583

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            AQT +D   A A L V+ P   P     I+ I A    ++W+  S          Y +Q
Sbjct: 584 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYTIQ 640

Query: 442 TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           T T    D + +  +  + +G          +P  +   RV+A N    G PS   + + 
Sbjct: 641 TKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIK 700

Query: 500 PEGVPGTVQSLEAIPLGSS--AFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
            +G    V   +    G S     + W  +  E   G   GY + ++   G +   +   
Sbjct: 701 TDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVT 760

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTP 615
            P   D      K   + PST +++ +  +   GDG  S  L  V     D        P
Sbjct: 761 NP---DTGRYVHKDETMRPSTAFQVKVKAFNNKGDGPYS--LTAVIHSAQD---APSEAP 812

Query: 616 NNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYE 675
             + +   +  EI  +  H   +I                                + Y+
Sbjct: 813 TAVGVKVLSSSEISVHWEHVVEKI-------------------------------VESYQ 841

Query: 676 IKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS 735
           I+    W   D E +   + V   E  +  ++  +P ++ F  V A N A  GPPS++I 
Sbjct: 842 IRY---WASHDKEAAAHRVQVASQE-YSARLENLLPDTQYFVEVRACNSAGCGPPSDMIE 897

Query: 736 FVT 738
             T
Sbjct: 898 TFT 900



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 152/657 (23%), Positives = 249/657 (37%), Gaps = 85/657 (12%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 189 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTKPYPADIVV 246

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  + A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 247 QFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 303

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N+ G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 304 DEGIYECEAENNRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 362

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 363 RWLKN-----GYSY---HRGELRLYDVTFENAGMYQCIAENTHGAIYANAELKILALAPT 414

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K + +W +G+E +   S  R +   D SL 
Sbjct: 415 FEMNPMKKKILAAKGGRVIIECKPKAAP--KPTFLWSKGTERLVNSS--RILIWEDGSLE 470

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC  +       +  TL +  P   + AP N  +    +A  +   S+
Sbjct: 471 INNITRSDGGVYTCFVENNKGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASF 530

Query: 424 NPVSPQSLRGHFRGYKVQ-----------TWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
           +P    +    F GY +               + +GE  IR   +      T      V 
Sbjct: 531 DPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVD 590

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
            S   A ++                    G PG    L    + +++  L W +    + 
Sbjct: 591 NSSASADLVV------------------RGPPGPPGGLRIEDIRATSVALTWSRGSDNHS 632

Query: 533 VLMGYKIKYQSV-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
            +  Y I+ +++     K  K  P     P I +    +A+   L P  +Y   +     
Sbjct: 633 PISKYTIQTKTILSDDWKDAKTDP-----PII-EGNMEAARAVDLIPWMEYEFRVVATNT 686

Query: 588 AGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            G G  S      K     P   P +V G G +   L I+W  +    H   +F Y + +
Sbjct: 687 LGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNNFGYIVAF 746

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
           +  + GE W +  V +      V  ++ T +P   +++KV     + DG  S+  +I
Sbjct: 747 KPFD-GEEWKKVTVTNPDTGRYVHKDE-TMRPSTAFQVKVKAFNNKGDGPYSLTAVI 801



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 139/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   I+  SDR S    G +L+I + +   D G Y C  S
Sbjct: 60  KVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 117

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 118 NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 171

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 172 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 228

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 229 LIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 288

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 289 STSGAVLKIFNIQLEDEGIYECEAENNRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 348

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+         E R      Y +T       ++G Y C A+ 
Sbjct: 349 YWPCVATGKPI--PTIRWLKNGYSY-HRGELRL-----YDVTFE-----NAGMYQCIAEN 395

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 396 THGAIYANAELKI 408



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   I     +    VG N +   
Sbjct: 47  PINTIYPE---ESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTS-DRYSMVGGNLVINN 102

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   +
Sbjct: 103 PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 162

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 163 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 222

Query: 299 SGSL---------TVKEH-THITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                        T K +   I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 223 FSKFIPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV--PDIRWRKVLE 280

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 281 PMPSTAE---ISTSGAVLKIFNIQLEDEGIYECEAENNRGKDKHQARIYVQ 328



 Score = 43.1 bits (100), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+    ++V+ + +  V W  V  + +      Y+++ W   D E +   + V   
Sbjct: 808 PSEAPTAVG-VKVLSSSEISVHWEHVVEKIVES----YQIRYWASHDKEAAAHRVQVASQ 862

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GPPS++I   T +  P     + +     S +
Sbjct: 863 E-YSARLENLLPDTQYFVEVRACNSAGCGPPSDMIETFTKKAPPSQPPRIISSVRSGSRY 921

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYK+ Y+
Sbjct: 922 IITWDHVVALSNESTVTGYKVLYR 945


>gi|440905205|gb|ELR55618.1| Contactin-1, partial [Bos grunniens mutus]
          Length = 987

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 186/725 (25%), Positives = 292/725 (40%), Gaps = 84/725 (11%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 210 PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 267

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 268 NIQLEDEGIYECEAENNRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 323

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG          R ++    +T EN      G Y C A N+ G +Y +
Sbjct: 324 TGKPIPTIRWLKNGYSYH------RGELRLYDVTFEN-----AGMYQCIAENTHGAIYAN 372

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP   W    + L    R  I
Sbjct: 373 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPTFLWSKGTERLVNSSRILI 432

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++  +D G YTCF  N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 433 WEDGSLEINNITRSDGGVYTCFVENNKGKANSTGTLVITDPTRIILAPINADITVGENAT 492

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ VW      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 493 MQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 552

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            AQT +D   A A L V+ P   P     I+ I A    ++W+  S          Y +Q
Sbjct: 553 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYTIQ 609

Query: 442 TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           T T    D + +  +  + +G          +P  +   RV+A N    G PS   + + 
Sbjct: 610 TKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIK 669

Query: 500 PEGVPGTVQSLEAIPLGSS--AFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
            +G    V   +    G S     + W  +  E   G   GY + ++   G +   +   
Sbjct: 670 TDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT-- 727

Query: 556 LPYISDPTTTS--AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS 613
              +++P T     K   + PST +++ +  +   GDG  S  L  V     D       
Sbjct: 728 ---VTNPDTGRYVHKDETMRPSTAFQVKVKAFNNKGDGPYS--LTAVIHSAQD---APSE 779

Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
            P  + +   +  EI  +  H   +I                                + 
Sbjct: 780 APTAVGVKVLSSSEISVHWEHVVEKI-------------------------------VES 808

Query: 674 YEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 733
           Y+I+    W   D E +   + V   E  +  ++  +P ++ F  V A N A  GPPS++
Sbjct: 809 YQIRY---WASHDKEAAAHRVQVASQE-YSARLENLLPDTQYFVEVRACNSAGCGPPSDM 864

Query: 734 ISFVT 738
           I   T
Sbjct: 865 IETFT 869



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 151/657 (22%), Positives = 248/657 (37%), Gaps = 85/657 (12%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 158 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTKPYPADIVV 215

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  + A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 216 QFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 272

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N+ G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 273 DEGIYECEAENNRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 331

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 332 RWLKN-----GYSY---HRGELRLYDVTFENAGMYQCIAENTHGAIYANAELKILALAPT 383

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K + +W +G+E +   S  R +   D SL 
Sbjct: 384 FEMNPMKKKILAAKGGRVIIECKPKAAP--KPTFLWSKGTERLVNSS--RILIWEDGSLE 439

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC  +       +  TL +  P   + AP N  +    +A  +   S+
Sbjct: 440 INNITRSDGGVYTCFVENNKGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASF 499

Query: 424 NPVSPQSLRGHFRGYKV-----------QTWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
           +P    +    F GY +               + +GE  IR   +      T      V 
Sbjct: 500 DPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVD 559

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
            S   A ++                    G PG    L    + +++  L W +    + 
Sbjct: 560 NSSASADLVV------------------RGPPGPPGGLRIEDIRATSVALTWSRGSDNHS 601

Query: 533 VLMGYKIKYQSV-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
            +  Y I+ +++     K  K  P       I +    +A+   L P  +Y   +     
Sbjct: 602 PISKYTIQTKTILSDDWKDAKTDPP------IIEGNMEAARAVDLIPWMEYEFRVVATNT 655

Query: 588 AGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            G G  S      K     P   P +V G G +   L I+W  +    H   +F Y + +
Sbjct: 656 LGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNNFGYIVAF 715

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
           +  + GE W +  V +      V  ++ T +P   +++KV     + DG  S+  +I
Sbjct: 716 KPFD-GEEWKKVTVTNPDTGRYVHKDE-TMRPSTAFQVKVKAFNNKGDGPYSLTAVI 770



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 139/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   I+  SDR S    G +L+I + +   D G Y C  S
Sbjct: 29  KVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSM--VGGNLVINNPDKQQDAGIYYCLAS 86

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 87  NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 140

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 141 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 197

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 198 LIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 257

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 258 STSGAVLKIFNIQLEDEGIYECEAENNRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 317

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+         E R      Y +T       ++G Y C A+ 
Sbjct: 318 YWPCVATGKPI--PTIRWLKNGYSY-HRGELRL-----YDVTFE-----NAGMYQCIAEN 364

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 365 THGAIYANAELKI 377



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   I     +    VG N +   
Sbjct: 16  PINTIYPE---ESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTS-DRYSMVGGNLVINN 71

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   +
Sbjct: 72  PDKQQDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 131

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 132 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 191

Query: 299 SGSL---------TVKEH-THITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                        T K +   I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 192 FSKFIPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV--PDIRWRKVLE 249

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 250 PMPSTAE---ISTSGAVLKIFNIQLEDEGIYECEAENNRGKDKHQARIYVQ 297



 Score = 44.7 bits (104), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 48/212 (22%), Positives = 87/212 (41%), Gaps = 18/212 (8%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+    ++V+ + +  V W  V  + +      Y+++ W   D E +   + V   
Sbjct: 777 PSEAPTAVG-VKVLSSSEISVHWEHVVEKIVES----YQIRYWASHDKEAAAHRVQVASQ 831

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GPPS++I   T +  P     + +     S +
Sbjct: 832 E-YSARLENLLPDTQYFVEVRACNSAGCGPPSDMIETFTKKAPPSQPPRIISSVRSGSRY 890

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            + W  V        + GYK+ Y+   G   G L          T   +    +    +Y
Sbjct: 891 IITWDHVVALSNESTVTGYKVLYRP-DGQHDGKLYS--------THKHSIEVPIPRDGEY 941

Query: 579 RIHLAGYTKAGDGAESKYLFYVPFKNPD-NVE 609
            + +  ++  GDG  S+     P+  P+ NVE
Sbjct: 942 VVEVRAHSDGGDGVVSQVKISGPYGFPNINVE 973


>gi|395838972|ref|XP_003792378.1| PREDICTED: contactin-2 [Otolemur garnettii]
          Length = 1005

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 169/623 (27%), Positives = 270/623 (43%), Gaps = 45/623 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P    ++     +L I ++ F D+G+Y C
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWATAE----PTLQIPNISFEDEGTYEC 306

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           E  N  G   +    + V A P +       +A     + + C A+G P P + W+ NG+
Sbjct: 307 EAENSKGR-DTVQGRVIVQAQPEWLKVISDTDADIGSNLHWGCAAAGKPRPTVRWLRNGE 365

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           P++      R +V    +    L   D+G Y C A N  G +Y    + V A AP+   +
Sbjct: 366 PLAS---QNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLS 422

Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           P         G  V++ C    APK  V W    + L    R T+   G L I +++ +D
Sbjct: 423 PVRRLIPAARGGEVIIPCHPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSD 482

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP++ L+ 
Sbjct: 483 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTF 542

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS-----GQYTCRAQTELDFIEAQATL 396
            W     PIDF+      Q  +   TV   S L++     G+YTC AQT +D    +AT+
Sbjct: 543 TWTLDDFPIDFDKPGGHYQRANVKETVGDLSILNAQLRHGGKYTCMAQTVVDSASKEATV 602

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GSIR 453
            V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G+   +R
Sbjct: 603 LVRGPPGPPGGVVVRDISDTTIQ-LSWS----RGFDNHSPIAKYTLQARTPPAGKWKQVR 657

Query: 454 ELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGVPGTVQ 508
               N +G + T +V    P      RVLA N    G  +GP S+I    T E  P    
Sbjct: 658 TNPANIEGNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSKI---RTKEAAPSVAP 714

Query: 509 SLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565
           S  +   G+     + W  +  E  NG   GY + ++    T       R+P  +D    
Sbjct: 715 SGLSGGGGAPGELIVNWTPMAREYQNGDGFGYLLSFRRQGSTHWQ--TARVPG-ADAQYF 771

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGSTPNNLVI 620
                 + P T + + +  Y + GDG ES   L Y     P   P  V  +G + + + +
Sbjct: 772 VYSNESIRPYTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNV 831

Query: 621 SWTAMPEIEHNAPHFKYRI-FWR 642
           +W  + + + N     Y I +W+
Sbjct: 832 TWEPVQQ-DMNGILLGYEIRYWK 853



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 149/374 (39%), Gaps = 38/374 (10%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           ++V L C    +P     W  +G  + + P  R  Q   G  +I+   +  D G Y C  
Sbjct: 55  EQVLLACRARASPPATYRWKMNGTEMKLEPGSR-HQLVGGNLVIMNPTKAQDAGVYQCLA 113

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIH------- 158
           SN VG   S    L       F    EF     +   T E     LP  P  H       
Sbjct: 114 SNPVGTVVSREAILR------FGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYR 167

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVY----- 211
           W+ N  P +  P + R  V      + I     SD GNY C AT+ + +  K V+     
Sbjct: 168 WLLNEFP-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQ 226

Query: 212 VNVLAH-----APEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           +N+ A      AP I    P + Y + G+ V L C  FG P P + W      L+    T
Sbjct: 227 LNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWAT 286

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
              T  L+I +++F D G Y C A N  G     G + V+          D + + G + 
Sbjct: 287 AEPT--LQIPNISFEDEGTYECEAENSKGRDTVQGRVIVQAQPEWLKVISDTDADIGSNL 344

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P  + ++ WLR  EP+  ++    +  +   L  +K S  DSG Y C A+ 
Sbjct: 345 HWGCAAAGKP--RPTVRWLRNGEPLASQNRVEVLAGD---LRFSKLSLEDSGMYQCVAEN 399

Query: 386 ELDFIEAQATLTVQ 399
           +   I A A L VQ
Sbjct: 400 KHGTIYASAELAVQ 413



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 131/586 (22%), Positives = 219/586 (37%), Gaps = 79/586 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P+   +R+        L    +   D G Y C   N  G   
Sbjct: 348 CAAAGKPRPTVRWLRNGEPLASQNRVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTIY 405

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F + P    I AA    V   C     P+  + W    + +  +  
Sbjct: 406 A-SAELAVQALAPDFRLSPVRRLIPAARGGEVIIPCHPRAAPKAVVLWSKGTEILVNSS- 463

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V P+  + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 464 --RVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 520

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G  + L C     P  ++ +     +        GG Y    + ET GDL I +    
Sbjct: 521 NLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYQRANVKETVGDLSILNAQLR 580

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
             G+YTC A+  + +A    ++ V+            ++             SD +++LS
Sbjct: 581 HGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRDI-------------SDTTIQLS 627

Query: 341 IVWLRGSE---PI----------------DFESEPRFVQSNDYSLTVTKSSELDSGQYTC 381
             W RG +   PI                   + P  ++ N  +  V   +     ++  
Sbjct: 628 --WSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIEGNAETAQVLGLTPWMDYEFRV 685

Query: 382 RAQTELDFIEAQA-TLTVQVPLEAPS---NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRG 437
            A   L   E    +  ++    APS   +          + +V+W P++ +   G   G
Sbjct: 686 LASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELIVNWTPMAREYQNGDGFG 745

Query: 438 YKVQ-------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGP 490
           Y +         W      G+  +  V   ES    +  + P      ++ ++N   +GP
Sbjct: 746 YLLSFRRQGSTHWQTARVPGADAQYFVYSNES----IRPYTPFE---VKIRSYNRRGDGP 798

Query: 491 PSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKGTK 548
            S      + E  P    + + A  + SS   + W   +Q  NG+L+GY+I+Y      +
Sbjct: 799 ESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGILLGYEIRYWKAGDKE 858

Query: 549 VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
                 R   +      SA++ GL P+TKY + +  Y +AG G  S
Sbjct: 859 AAADRVRTAGLD----ISARVTGLHPNTKYHVTVRAYNRAGTGPAS 900



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 114/298 (38%), Gaps = 34/298 (11%)

Query: 126 PYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
           P F  +P    F   + EE V   C+A   P     W  NG  +   P +  + VG N +
Sbjct: 37  PVFEDQPLSLLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNLV 96

Query: 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTCR 241
            +   +  D G Y C A+N +G V     +       E ++  +D   T +G  V+L C 
Sbjct: 97  IMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKTHEGWGVMLPCN 156

Query: 242 VFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGTA 296
                P     W+ N+      T GR+ + + TG+L I     +D G Y+C A + +  +
Sbjct: 157 PPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFS 216

Query: 297 QGSGSLTVKEHTHITDQPEDYEVEA---------------GQSATFRCNAVSDPSLKLSI 341
             S      +   +    ED  + A               GQ  T  C A  +P  +  I
Sbjct: 217 TKS---VFSKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPR--I 271

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            W +    +D    P++  + + +L +   S  D G Y C A+        Q  + VQ
Sbjct: 272 KWRK----VDGSLSPQWATA-EPTLQIPNISFEDEGTYECEAENSKGRDTVQGRVIVQ 324


>gi|194221125|ref|XP_001915937.1| PREDICTED: contactin-4 isoform 1 [Equus caballus]
          Length = 1026

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 173/634 (27%), Positives = 267/634 (42%), Gaps = 65/634 (10%)

Query: 51  VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           V+L C   G P+P  IW + DG PI    R  + N    L I + +  D G Y C   N 
Sbjct: 243 VKLECFALGNPVPTIIWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGLYECVAENS 300

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G+  +    L+  A P +  +   I+ A EE V +ECKA+G P+P   W+ NG+ +   
Sbjct: 301 RGKNVARG-QLTFYAQPNWIQKINDIHVAIEENVFWECKANGRPKPTYRWLKNGEAL-LT 358

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
               + + G   ITI NL  SD G Y C A N  G ++    ++V+A  P+ +       
Sbjct: 359 QERIQIEQGTLNITIVNL--SDAGMYQCVAENKHGVIFSSAELSVIALGPDFSRTLLKRV 416

Query: 230 TVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADSGEYT 286
           T+   G  VV+ C+   +PKP   W   +  L    R +I E G L+I +V  +D+G YT
Sbjct: 417 TLVKVGGEVVIECKPKASPKPVYTWKKGRDILRENERISISEDGSLRIVNVTKSDAGSYT 476

Query: 287 CFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           C A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL +   W   
Sbjct: 477 CIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFN 536

Query: 347 SEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
              IDF+ +         Q +   L +       +G+Y C  QT +D + A A L V+ P
Sbjct: 537 GHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTTVDKLSAAADLIVRGP 596

Query: 402 LEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGEGSIR 453
              P   T+ ++ D   A +SW P     SP ++      Y +Q  T          ++ 
Sbjct: 597 PGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFSVGWQAVNTVP 649

Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTPEGVP 504
           ELI   G++ T  V    P  +   R +A N    G PS         E +  VTP  V 
Sbjct: 650 ELI--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVS 707

Query: 505 GTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI--S 560
           G   S        S   + W  V  E  NG   GY + ++       G ++  L  +  +
Sbjct: 708 GGGGS-------KSELVITWETVPEELQNGRGFGYVVAFRP-----YGKIIWMLTVLASA 755

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTP 615
           D +    +   + P   + + +  +   G+G  S           P K P ++  R  + 
Sbjct: 756 DASRYVFRNESVRPFFPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSA 815

Query: 616 NNLVISWTAMPEIEHNAPHFK-YRIFWRRHNTGE 648
            ++ + W +   IE N    + Y + + RH+  E
Sbjct: 816 TDIEVFWAS--PIEKNRGRIQGYEVKYWRHDDKE 847



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 164/638 (25%), Positives = 240/638 (37%), Gaps = 85/638 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V+ PE +  
Sbjct: 178 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPT 237

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   +GKPI++     RR      + I N ++ D G Y 
Sbjct: 238 AKGTTVKLECFALGNPVPTIIWRRADGKPIAR---KARRHKSNGILEIPNFQQEDAGLYE 294

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P   +   D +    + V   C+  G PKP   W+ N 
Sbjct: 295 CVAENSRGKNVARGQLTFYAQ-PNWIQKINDIHVAIEENVFWECKANGRPKPTYRWLKNG 353

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           + L       +E G L IT V  +D+G Y C A NK G    S  L+V     I   P+ 
Sbjct: 354 EALLTQERIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSV-----IALGPDF 408

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  K    W +G + I  E+E R   S D SL +
Sbjct: 409 SRTLLKRVTLVKVGGEVVIECKPKASP--KPVYTWKKGRD-ILRENE-RISISEDGSLRI 464

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
              ++ D+G YTC A        +   L V+ P       + + V   +  V+       
Sbjct: 465 VNVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHD 524

Query: 429 QSL----RGHFRGYKVQTWTEKD------GEGSIRELIVNKGE---------STTTEVDK 469
            SL       F G+ +    + D      G+ S  +L++   +            T VDK
Sbjct: 525 HSLDIVFTWSFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTTVDK 584

Query: 470 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPE 528
              A+    R         GPP    +    E    T Q S    P   S   +  ++  
Sbjct: 585 LSAAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQAR 635

Query: 529 QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
            P      + + +Q+V           +P + D  T +A + GL P  +Y          
Sbjct: 636 TP------FSVGWQAVN---------TVPELIDGKTFTATVVGLNPWVEYEFRTVAANVI 680

Query: 589 GDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F Y + +R
Sbjct: 681 GIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFR 740

Query: 643 RHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
            +     W    +     S  V  N+    F P+E+KV
Sbjct: 741 PYGK-IIWMLTVLASADASRYVFRNESVRPFFPFEVKV 777



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 119/475 (25%), Positives = 185/475 (38%), Gaps = 40/475 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV+L C   G P P   W  +G  ++            SL+I +  +  D G+Y C  +
Sbjct: 44  KKVKLNCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDAGTYQCIAT 103

Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFEC---KASGLPEPEIHWVHNG 163
           N  G   S    L       F T     ++  + + +   C     SG  E    W+ N 
Sbjct: 104 NSFGTIVSREAKLQFAYLENFKTRTRSTVSVRQGQGMVLLCGPPAHSG--ELSYAWIFNE 161

Query: 164 KPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN-- 213
            P  Q   + RR V      + I  + KSD GNY C  TN+      LG     +  N  
Sbjct: 162 YPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDG 218

Query: 214 -VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILETG 270
            +  + P+I  + P+   T  G TV L C   G P P + W   + K +          G
Sbjct: 219 VMGEYEPKIEVQFPETVPTAKGTTVKLECFALGNPVPTIIWRRADGKPIARKARRHKSNG 278

Query: 271 DLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN 330
            L+I +    D+G Y C A N  G     G LT     +   +  D  V   ++  + C 
Sbjct: 279 ILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAIEENVFWECK 338

Query: 331 AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
           A   P  K +  WL+  E +  +     +Q    +L +T  +  D+G Y C A+ +   I
Sbjct: 339 ANGRP--KPTYRWLKNGEALLTQER---IQIEQGTLNITIVNLSDAGMYQCVAENKHGVI 393

Query: 391 EAQATLTVQVPLEAPSNFTLIQVIDAKK----AVVSWNP-VSPQSLRGHFRGYKVQTWTE 445
            + A L+V + L    + TL++ +   K     V+   P  SP+ +    +G  +    E
Sbjct: 394 FSSAELSV-IALGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDILRENE 452

Query: 446 K---DGEGSIRELIVNK---GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
           +     +GS+R + V K   G  T    + F  AS     V+        PPS +
Sbjct: 453 RISISEDGSLRIVNVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSM 507



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 117/302 (38%), Gaps = 32/302 (10%)

Query: 119 DLSVLAAPYFTVEPEFIN---AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D   L  P F  EP  +     +EE+ V   C+  G P+P I W  NG  +     + R 
Sbjct: 19  DDYTLHGPIFIQEPSHVMFPLDSEEKKVKLNCEVKGNPKPHIRWKLNGTDVDIG-MDFRY 77

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
            V    + I N  K+ D G Y C ATNS G +         A+        +   +V  G
Sbjct: 78  SVVEGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRQG 137

Query: 234 KTVVLTCRVFGAP----KPEVNWIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYTC 287
           + +VL C   G P    +    WI N+        R+   ETG+L I  V  +D G YTC
Sbjct: 138 QGMVLLC---GPPAHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTC 194

Query: 288 FARNK------LG-----TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
              N       LG       +  G +   E       PE      G +    C A+ +P 
Sbjct: 195 VVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTAKGTTVKLECFALGNPV 254

Query: 337 LKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
              +I+W R   +PI    + R  +SN   L +    + D+G Y C A+       A+  
Sbjct: 255 --PTIIWRRADGKPI--ARKARRHKSNGI-LEIPNFQQEDAGLYECVAENSRGKNVARGQ 309

Query: 396 LT 397
           LT
Sbjct: 310 LT 311



 Score = 41.2 bits (95), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 23/191 (12%)

Query: 432  RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            RG  +GY+V+ W   D E + R+ I   G  T+T++     ++     V A+N A  GP 
Sbjct: 830  RGRIQGYEVKYWRHDDKEENARK-IRTIGNQTSTKITNLKGSALYHLAVKAYNTAGTGPS 888

Query: 492  SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
            S  ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  +
Sbjct: 889  SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNR 944

Query: 546  GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
             +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P    
Sbjct: 945  QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIP--KI 992

Query: 606  DNVEGRGSTPN 616
             N   RG+ P+
Sbjct: 993  SNAYARGAGPS 1003


>gi|224066635|ref|XP_002186834.1| PREDICTED: contactin-6 [Taeniopygia guttata]
          Length = 1022

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 188/405 (46%), Gaps = 19/405 (4%)

Query: 31  HAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSL 89
           + PK +    +   A +   V L C   G P+P   W + DG  +  + +I     G  L
Sbjct: 208 YEPKIEVRFPETTYAAKGSSVRLECFALGNPVPSISWKRSDGSSL--AKKIQHNRAGGVL 265

Query: 90  IIKHVEFSDQGSYTCEVSN--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
            I +VE  D+GSY C   N  G+  A+     L V A P +  + +    +  +++ +EC
Sbjct: 266 EIPNVEQEDEGSYECMAGNTRGINIARG---QLLVYAPPEWDKKIQNAFLSLYDSLFWEC 322

Query: 148 KASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVY 207
           KA G P P   W+ NG+P+       R ++    + I  L  SD+G Y C A N    +Y
Sbjct: 323 KARGKPSPSYSWLKNGQPLMS---EERIQIENGTLLIPMLNLSDSGLYQCVAENKYDTIY 379

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRY 264
            +  + V+A AP+ +  P  + +V   G  V + C+   +P+  V+W    + L    R 
Sbjct: 380 ANAELRVIAAAPDFSRNPVKKLSVVQVGGQVTIGCKPSASPRAVVSWRKGLEVLRQNKRV 439

Query: 265 TILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
             LE G L+I++++  D+G YTC A N+ GTA+ SG+L VKE T IT  P D +   G+S
Sbjct: 440 VFLEDGSLRISNISKVDAGVYTCVATNQFGTARNSGNLIVKERTVITIPPSDTDATVGES 499

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDF----ESEPRFVQSNDYSLTVTKSSELDSGQYT 380
               C    DPSL +   W    + ID         R  + +   L +       SG+Y 
Sbjct: 500 IVLPCQVSHDPSLDVLFSWSFNGQRIDLSIGIHHFERIGRESAGDLMIRNIQLHHSGKYV 559

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           C  QT LD   A A + V+ P   P +   ++ + +  A +SW P
Sbjct: 560 CMVQTSLDSQSAAADIIVRGPPGPPEDVK-VEHVSSTTAGLSWKP 603



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 153/660 (23%), Positives = 250/660 (37%), Gaps = 87/660 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L +  VE  D G+YTC VS+     + +    ++            P   V  PE   A
Sbjct: 163 NLYLAKVEPWDVGNYTCAVSSAEARRRVWGTPTALTLRGDGVMGEYEPKIEVRFPETTYA 222

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNR----ITIENLRKSDT 192
           A+  +V  EC A G P P I W   +G  ++       +K+  NR    + I N+ + D 
Sbjct: 223 AKGSSVRLECFALGNPVPSISWKRSDGSSLA-------KKIQHNRAGGVLEIPNVEQEDE 275

Query: 193 GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNW 252
           G+Y C A N+ G       + V A  PE  +  ++ +     ++   C+  G P P  +W
Sbjct: 276 GSYECMAGNTRGINIARGQLLVYA-PPEWDKKIQNAFLSLYDSLFWECKARGKPSPSYSW 334

Query: 253 IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD 312
           + N + L       +E G L I  +  +DSG Y C A NK  T   +  L V     I  
Sbjct: 335 LKNGQPLMSEERIQIENGTLLIPMLNLSDSGLYQCVAENKYDTIYANAELRV-----IAA 389

Query: 313 QPEDYE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDY 364
            P+           V+ G   T  C   + P   +S  W +G E +      R V   D 
Sbjct: 390 APDFSRNPVKKLSVVQVGGQVTIGCKPSASPRAVVS--WRKGLEVL--RQNKRVVFLEDG 445

Query: 365 SLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ--VPLEAPSNFTLIQVIDA--KKAV 420
           SL ++  S++D+G YTC A  +         L V+    +  P + T   V ++      
Sbjct: 446 SLRISNISKVDAGVYTCVATNQFGTARNSGNLIVKERTVITIPPSDTDATVGESIVLPCQ 505

Query: 421 VSWNPVSPQSLRGHFRGYKV----------QTWTEKDGEGSIRELIVNKGESTTTEVDKF 470
           VS +P         F G ++          +   E  G+  IR + ++        V   
Sbjct: 506 VSHDPSLDVLFSWSFNGQRIDLSIGIHHFERIGRESAGDLMIRNIQLHHSGKYVCMVQTS 565

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
           + +    A ++                    G PG  + ++   + S+   L W      
Sbjct: 566 LDSQSAAADIIV------------------RGPPGPPEDVKVEHVSSTTAGLSWKPGVDN 607

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           N  +  Y +  Q+     VG   +   P + +  T  A +  L P  +Y   +      G
Sbjct: 608 NSPVQIYSV--QTRTPFSVGWQAVATAPEVINGRTHKATVVDLSPWVEYEFRVVASNSVG 665

Query: 590 DGAESK------YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  S+          VP   P N+ G G + + LVI+W  + E   N   F Y + +R 
Sbjct: 666 IGEPSRPSALLRTKAAVPVVAPTNISGGGGSRSELVITWEPVSEELQNGEGFGYIVMFRP 725

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
             +   W +  V     S+ V  N+      P+E+KV       +GEG++  + I+  GE
Sbjct: 726 LGS-TTWTKAVVASVESSKYVYRNESITPLSPFEVKV--GVYNNEGEGTLSSISIIYSGE 782



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 146/646 (22%), Positives = 242/646 (37%), Gaps = 85/646 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G P+   +RI   N   +L+I  +  SD G Y C   N      
Sbjct: 322 CKARGKPSPSYSWLKNGQPLMSEERIQIEN--GTLLIPMLNLSDSGLYQCVAENKYDTIY 379

Query: 115 SYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPN 172
           + +    + AAP F+  P  +         VT  CK S  P   + W    + + Q    
Sbjct: 380 ANAELRVIAAAPDFSRNPVKKLSVVQVGGQVTIGCKPSASPRAVVSWRKGLEVLRQNKRV 439

Query: 173 PRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD 232
              + G  RI+  N+ K D G Y C ATN  G       + ++     IT  P D     
Sbjct: 440 VFLEDGSLRIS--NISKVDAGVYTCVATNQFGTARNSGNL-IVKERTVITIPPSDTDATV 496

Query: 233 GKTVVLTCRVFGAPKPEV--NWIHNQK--ELTGG-----RYTILETGDLKITDVAFADSG 283
           G+++VL C+V   P  +V  +W  N +  +L+ G     R      GDL I ++    SG
Sbjct: 497 GESIVLPCQVSHDPSLDVLFSWSFNGQRIDLSIGIHHFERIGRESAGDLMIRNIQLHHSG 556

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT----FRCNAVSDPSLKL 339
           +Y C  +  L +   +  + V+        PED +VE   S T    ++    ++  +++
Sbjct: 557 KYVCMVQTSLDSQSAAADIIVRGPP---GPPEDVKVEHVSSTTAGLSWKPGVDNNSPVQI 613

Query: 340 SIVWLRGSEPIDFES---EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE----- 391
             V  R    + +++    P  +    +  TV   S     ++   A   +   E     
Sbjct: 614 YSVQTRTPFSVGWQAVATAPEVINGRTHKATVVDLSPWVEYEFRVVASNSVGIGEPSRPS 673

Query: 392 AQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-------TWT 444
           A       VP+ AP+N +        + V++W PVS +   G   GY V        TWT
Sbjct: 674 ALLRTKAAVPVVAPTNISGGGG-SRSELVITWEPVSEELQNGEGFGYIVMFRPLGSTTWT 732

Query: 445 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT----P 500
           +           V + ES T       P S    +V  +N    G  S I    +    P
Sbjct: 733 KAVVASVESSKYVYRNESIT-------PLSPFEVKVGVYNNEGEGTLSSISIIYSGEDEP 785

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560
           +  P    +L          +L  +   +  G ++GY++ Y                +I 
Sbjct: 786 QMAPAGASALSVSAAAVEVSWLP-IPWNRHTGRVLGYEVLY----------------WID 828

Query: 561 DP------------TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFK 603
           DP              T+  + GL  +T Y   +  Y  AG G  S  +        P +
Sbjct: 829 DPKESTAGKVRVSGNVTAKNITGLRANTVYFATVRAYNTAGTGPSSTPVNVTTKKSPPSQ 888

Query: 604 NPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEA 649
            P N+  +  T +   ++W  +  +E+ +    Y+I +R++   +A
Sbjct: 889 PPANIAWK-LTNSKFCLNWEHVKTMENESEVLGYKILYRQNRQSKA 933



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 141/369 (38%), Gaps = 26/369 (7%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS-DQGSYTCEV 106
           N ++ L C   G PLP   W ++G  I+ +        G SL I +   + D G+Y C  
Sbjct: 26  NPEILLNCTAKGYPLPYYRWKQNGTDIDLTMSYHYRLVGGSLAINNPHKNQDIGTYQCLA 85

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKA-SGLPEPEIHWVHNGK 164
           +N  G   S    L       F   P   ++  E + V   C      P     W+ N  
Sbjct: 86  TNSFGTILSRKAKLQFAYLENFETRPRSPVSVREGQGVVLLCGTPPRFPGLSYTWLFNNN 145

Query: 165 PISQAPPNPRRKV--GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA------ 216
            +     + RR V      + +  +   D GNY C  +++     + V+    A      
Sbjct: 146 TLDLR-EDSRRFVSQATGNLYLAKVEPWDVGNYTCAVSSA--EARRRVWGTPTALTLRGD 202

Query: 217 -----HAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETG 270
                + P+I    P+  Y   G +V L C   G P P ++W  +       +      G
Sbjct: 203 GVMGEYEPKIEVRFPETTYAAKGSSVRLECFALGNPVPSISWKRSDGSSLAKKIQHNRAG 262

Query: 271 D-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
             L+I +V   D G Y C A N  G     G L V        + ++  +    S  + C
Sbjct: 263 GVLEIPNVEQEDEGSYECMAGNTRGINIARGQLLVYAPPEWDKKIQNAFLSLYDSLFWEC 322

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   PS   S  WL+  +P+   SE R +Q  + +L +   +  DSG Y C A+ + D 
Sbjct: 323 KARGKPSPSYS--WLKNGQPL--MSEER-IQIENGTLLIPMLNLSDSGLYQCVAENKYDT 377

Query: 390 IEAQATLTV 398
           I A A L V
Sbjct: 378 IYANAELRV 386



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 110/306 (35%), Gaps = 34/306 (11%)

Query: 123 LAAPYFTVEPEFIN---AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGP 179
           L  P F  EP  I     +    +   C A G P P   W  NG  I        R VG 
Sbjct: 6   LHGPIFIQEPYDITYSMGSANPEILLNCTAKGYPLPYYRWKQNGTDIDLTMSYHYRLVG- 64

Query: 180 NRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
             + I N  K+ D G Y C ATNS G +         A+       P+   +V +G+ VV
Sbjct: 65  GSLAINNPHKNQDIGTYQCLATNSFGTILSRKAKLQFAYLENFETRPRSPVSVREGQGVV 124

Query: 238 LTCRV---FGAPKPEVNWIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCF-- 288
           L C     F  P     W+ N   L       R+    TG+L +  V   D G YTC   
Sbjct: 125 LLCGTPPRF--PGLSYTWLFNNNTLDLREDSRRFVSQATGNLYLAKVEPWDVGNYTCAVS 182

Query: 289 ---ARNKLG------TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
              AR ++       T +G G +   E       PE      G S    C A+ +P    
Sbjct: 183 SAEARRRVWGTPTALTLRGDGVMGEYEPKIEVRFPETTYAAKGSSVRLECFALGNPV--P 240

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYS--LTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           SI W R     D  S  + +Q N     L +    + D G Y C A        A+  L 
Sbjct: 241 SISWKRS----DGSSLAKKIQHNRAGGVLEIPNVEQEDEGSYECMAGNTRGINIARGQLL 296

Query: 398 VQVPLE 403
           V  P E
Sbjct: 297 VYAPPE 302



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 14/178 (7%)

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           VSW P+      G   GY+V  W +   E +  ++ V+ G  T   +      +  FA V
Sbjct: 804 VSWLPIPWNRHTGRVLGYEVLYWIDDPKESTAGKVRVS-GNVTAKNITGLRANTVYFATV 862

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYK 538
            A+N A  GP S  ++  T +  P    +  A  L +S F L W  VK  +    ++GYK
Sbjct: 863 RAYNTAGTGPSSTPVNVTTKKSPPSQPPANIAWKLTNSKFCLNWEHVKTMENESEVLGYK 922

Query: 539 IKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGYTKAGDGAESK 595
           I Y+  + +K         +I +   TSA+L  L P    Y I +   +  GDG+ S+
Sbjct: 923 ILYRQNRQSKA--------HILETNNTSAEL--LVPFEEDYLIEIRTVSDGGDGSSSE 970


>gi|194210217|ref|XP_001915523.1| PREDICTED: LOW QUALITY PROTEIN: contactin-2-like [Equus caballus]
          Length = 1041

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 168/603 (27%), Positives = 260/603 (43%), Gaps = 45/603 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWATAE----PTLQIPSVSFEDEGTYEC 306

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           E  N  G   +    + V A P +        A     + + C A+G P P + W+ NG+
Sbjct: 307 EAENSKGR-DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWSCAAAGKPRPTVRWLRNGE 365

Query: 165 P-ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           P +SQ+    R +V    +    L   D+G Y C A N  G VY    + V A AP+   
Sbjct: 366 PLVSQS----RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTVYASAELAVQALAPDFRL 421

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
            P         G  VV+ C+   APK  V W    + L    R T+   G L + +++ +
Sbjct: 422 NPIRRLIPAARGGEVVILCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLILRNISRS 481

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D G+YTCFA N +G A  +G L+V++ T IT  P   +V  G + T +C+A  DP++ L+
Sbjct: 482 DEGKYTCFAENFMGKANSTGVLSVRDATKITLAPSSADVNLGDNLTLQCHASHDPTMDLT 541

Query: 341 IVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
            VW     PIDF+          V+     LT+  +     G+YTC AQT +D +  +AT
Sbjct: 542 FVWTLDDFPIDFDKPGSHYRRASVKETVGDLTILNAQLRHGGKYTCMAQTVVDSVSKEAT 601

Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GSI 452
           + V+ P   P    +  V D     +SW+    +    H     Y +Q  T   G+   +
Sbjct: 602 VLVRGPPGPPGGVVVRNVGDT-TVQLSWS----RGFDNHSPIAKYTLQARTPPAGKWKQV 656

Query: 453 RELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGVPGTV 507
           R    N +G + T +V    P +    RVLA N    G  +GP S+I    T E  P   
Sbjct: 657 RTNPANVEGNAETAQVLGLTPWTDYEFRVLASNILGTGEPSGPSSKI---RTQEAAPSVA 713

Query: 508 QSLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT 564
            S  +   G+     + W  V  E  NG   GY + ++  +    G    R+P  +D   
Sbjct: 714 PSGLSGGGGAPGELVVNWTPVPREYQNGDGFGYLLSFR--RQGSAGWQTARVPG-ADAQY 770

Query: 565 TSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEGRGSTPNNLV 619
                  + P T + + +  Y + G G ES           P   P  V  +G + + + 
Sbjct: 771 FVYSNDSVRPYTPFEVKIRSYNRRGAGPESLTALVHSAEEEPRVTPTKVWAKGVSSSEMN 830

Query: 620 ISW 622
           ++W
Sbjct: 831 VTW 833



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 148/374 (39%), Gaps = 38/374 (10%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           +KV L C    +P     W  +G  + + P  R  Q   G  +I+   +  D G Y C  
Sbjct: 55  EKVTLACRARASPPATYRWKMNGTEMKLEPGSR-HQLVGGNLVIMNPSKAQDAGVYQCLA 113

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIH------- 158
           SN VG   S    L       F    EF     +   T E     LP  P  H       
Sbjct: 114 SNPVGTIVSREAVLR------FGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYR 167

Query: 159 WVHNGKPISQAPPNPRRKVGPNR--ITIENLRKSDTGNYGCNATNSLGYVYKDVY----- 211
           W+ N  P +  P + R  V      + I     SD GNY C AT+ + +  K V+     
Sbjct: 168 WLLNEFP-NFIPTDGRHFVSQTTGDLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQ 226

Query: 212 VNVLAH-----APEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           +N+ A      AP I    P + Y + G+ V L C  FG P P + W      L+    T
Sbjct: 227 LNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWAT 286

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
              T  L+I  V+F D G Y C A N  G     G + V+          D E + G + 
Sbjct: 287 AEPT--LQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNL 344

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P  + ++ WLR  EP+  +S    +  +   L  +K S  DSG Y C A+ 
Sbjct: 345 RWSCAAAGKP--RPTVRWLRNGEPLVSQSRVEVLAGD---LRFSKLSLEDSGMYQCVAEN 399

Query: 386 ELDFIEAQATLTVQ 399
           +   + A A L VQ
Sbjct: 400 KHGTVYASAELAVQ 413



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 129/577 (22%), Positives = 213/577 (36%), Gaps = 60/577 (10%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P+    R+        L    +   D G Y C   N  G   
Sbjct: 348 CAAAGKPRPTVRWLRNGEPLVSQSRVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTVY 405

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F + P    I AA    V   C+    P+  + W    + +  +  
Sbjct: 406 A-SAELAVQALAPDFRLNPIRRLIPAARGGEVVILCQPRAAPKAVVLWSKGTEILVNSS- 463

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V P+  + + N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 464 --RVTVTPDGTLILRNISRSDEGKYTCFAENFMGKANSTGVLSV-RDATKITLAPSSADV 520

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G  + L C     P  ++ ++    +        G  Y   ++ ET GDL I +    
Sbjct: 521 NLGDNLTLQCHASHDPTMDLTFVWTLDDFPIDFDKPGSHYRRASVKETVGDLTILNAQLR 580

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE-----DYEVEAGQS---------AT 326
             G+YTC A+  + +     ++ V+               D  V+   S         A 
Sbjct: 581 HGGKYTCMAQTVVDSVSKEATVLVRGPPGPPGGVVVRNVGDTTVQLSWSRGFDNHSPIAK 640

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQYT 380
           +   A + P+ K   V    + P + E      Q        DY   V  S+ L +G+ +
Sbjct: 641 YTLQARTPPAGKWKQV---RTNPANVEGNAETAQVLGLTPWTDYEFRVLASNILGTGEPS 697

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
               +++   EA  ++                     + VV+W PV  +   G   GY +
Sbjct: 698 G-PSSKIRTQEAAPSVAPSG--------LSGGGGAPGELVVNWTPVPREYQNGDGFGYLL 748

Query: 441 QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 500
               +         +     +      D   P +    ++ ++N    GP S      + 
Sbjct: 749 SFRRQGSAGWQTARVPGADAQYFVYSNDSVRPYTPFEVKIRSYNRRGAGPESLTALVHSA 808

Query: 501 EGVPG-TVQSLEAIPLGSSAFYLKWVKPEQP-NGVLMGYK-IKYQSVKGTKVGPLLERLP 557
           E  P  T   + A  + SS   + W   +Q  NG+L+GY+ I+Y      +      R  
Sbjct: 809 EEEPRVTPTKVWAKGVSSSEMNVTWDPVQQDVNGILLGYEXIRYWKAGDKEAAADRVRTA 868

Query: 558 YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            +     TSA++ GL P+TKY + +  Y +AG G  S
Sbjct: 869 GLD----TSARVTGLHPNTKYHVTVRAYNRAGTGPAS 901



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 115/298 (38%), Gaps = 34/298 (11%)

Query: 126 PYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
           P F  +P    F   + EE VT  C+A   P     W  NG  +   P +  + VG N +
Sbjct: 37  PVFEDQPLGLLFPEESTEEKVTLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNLV 96

Query: 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTCR 241
            +   +  D G Y C A+N +G +     V       E ++  +D   T +G  V+L C 
Sbjct: 97  IMNPSKAQDAGVYQCLASNPVGTIVSREAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCN 156

Query: 242 VFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGTA 296
                P     W+ N+      T GR+ + + TGDL I     +D G Y+C A + +  +
Sbjct: 157 PPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGDLYIARTNASDLGNYSCLATSHMDFS 216

Query: 297 QGSGSLTVKEHTHITDQPEDYEVEA---------------GQSATFRCNAVSDPSLKLSI 341
             S      +   +    ED  + A               GQ  T  C A  +P  +  I
Sbjct: 217 TKS---VFSKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPR--I 271

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            W +    +D    P++  + + +L +   S  D G Y C A+        Q  + VQ
Sbjct: 272 KWRK----VDGSLSPQWATA-EPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQ 324


>gi|432092484|gb|ELK25099.1| Neural cell adhesion molecule L1-like protein [Myotis davidii]
          Length = 1190

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 140/523 (26%), Positives = 232/523 (44%), Gaps = 26/523 (4%)

Query: 38  VTRKKEVA---LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV 94
           V R  E A   LR   + L C   G P PQ  W K G  + P  R ++ NYGK L I++V
Sbjct: 242 VARGPESAVTVLRGDTLVLECFAEGLPTPQVGWEKVGGDL-PKGRETKENYGKMLKIENV 300

Query: 95  EFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPE 154
            + D+G+Y C  +N +G A ++   ++V   P +T +P+    +   +    C+A G PE
Sbjct: 301 SYEDKGNYRCTANNFLGVA-THDFHVTVEEPPRWTKKPQSGVYSTRSSGILLCEAEGEPE 359

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
           P I W  NG PI + P      V P  ++  +L+ + T  Y C A+N+ G +  +  V+V
Sbjct: 360 PVIRWRVNGIPIEENP-FAGDVVSPGEVSFTDLQPNHTAVYQCEASNAHGTILANANVDV 418

Query: 215 LAHAPEITEAPKDEYT-VDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGD 271
           +   P I    ++ Y  V G +  L C  F +P+  V+W      + L G RY +   G 
Sbjct: 419 VDVRPLIETEDEESYAAVAGSSAFLLCEFFASPQAMVSWQKADAARPLEGPRYHVHTNGT 478

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
           L+I +    D+G Y+C+  N  G    + SL ++  T +   P D  V    +    C +
Sbjct: 479 LQIREATVEDAGAYSCWVENAQGKTAVTASLDIRNATRLQVSPRDPRVPRSHTLELHCES 538

Query: 332 VSDPSLK--LSIVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
             DP LK  L + W +G    +   +E   +  +   LT++  +  D G YTC A T LD
Sbjct: 539 ECDPHLKPSLRLTWSKGGAAFETNGTEDGRILIDGAHLTISNLTLEDQGVYTCSAHTALD 598

Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
               +  +TV    + P N  L +  + +   ++W+  +  S   +  GY V+    ++ 
Sbjct: 599 SAANETHVTVLDVPDPPENLRLSERQN-RSVRLTWD--AGDSHNSNISGYVVEFEGNREE 655

Query: 449 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF-----VTPEGV 503
            G   +L    G  TT  +    P  +   RV+A N      PS            P+  
Sbjct: 656 PGRWEQLAAVPGGETTVLL-TLAPYVRYQFRVIAANEVGRSRPSRPSEHHETPPAAPDKN 714

Query: 504 PGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSV 544
           P  V+   + P       ++W  +K  + NG  + Y++ ++ +
Sbjct: 715 PQNVRVQASQP---KEMVIRWEPLKSTEQNGPGLEYRVAWKPL 754



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 153/675 (22%), Positives = 259/675 (38%), Gaps = 109/675 (16%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGC 197
           +T+  EC A GLP P++ W   G  + +      R+   N    + IEN+   D GNY C
Sbjct: 256 DTLVLECFAEGLPTPQVGWEKVGGDLPKG-----RETKENYGKMLKIENVSYEDKGNYRC 310

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK 257
            A N LG    D +V V    P  T+ P+        + +L C   G P+P + W  N  
Sbjct: 311 TANNFLGVATHDFHVTV-EEPPRWTKKPQSGVYSTRSSGILLCEAEGEPEPVIRWRVNGI 369

Query: 258 ELTGGRYT--ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI--TDQ 313
            +    +   ++  G++  TD+    +  Y C A N  GT   + ++ V +   +  T+ 
Sbjct: 370 PIEENPFAGDVVSPGEVSFTDLQPNHTAVYQCEASNAHGTILANANVDVVDVRPLIETED 429

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            E Y   AG SA   C   + P   +S      + P++    PR+    + +L + +++ 
Sbjct: 430 EESYAAVAGSSAFLLCEFFASPQAMVSWQKADAARPLE---GPRYHVHTNGTLQIREATV 486

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRG 433
            D+G Y+C  +         A+L ++       N T +QV          +P  P+  R 
Sbjct: 487 EDAGAYSCWVENAQGKTAVTASLDIR-------NATRLQV----------SPRDPRVPRS 529

Query: 434 HFRGYKVQTWTEKDGEGSIRELIVNKG----ESTTTEVDKFVPASKNFA---RVLAFNGA 486
           H      ++  +   + S+R L  +KG    E+  TE  + +    +       L   G 
Sbjct: 530 HTLELHCESECDPHLKPSLR-LTWSKGGAAFETNGTEDGRILIDGAHLTISNLTLEDQGV 588

Query: 487 YNGPPSEII------SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
           Y       +      + VT   VP   ++L      + +  L W   +  N  + GY ++
Sbjct: 589 YTCSAHTALDSAANETHVTVLDVPDPPENLRLSERQNRSVRLTWDAGDSHNSNISGYVVE 648

Query: 541 YQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY 599
           ++   G +  P   E+L  +  P   +  L  L P  +Y+  +    + G    S+   +
Sbjct: 649 FE---GNREEPGRWEQLAAV--PGGETTVLLTLAPYVRYQFRVIAANEVGRSRPSRPSEH 703

Query: 600 ------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQD 653
                  P KNP NV  + S P  +VI W  +   E N P  +YR+ W+       W ++
Sbjct: 704 HETPPAAPDKNPQNVRVQASQPKEMVIRWEPLKSTEQNGPGLEYRVAWKPLGALGEWEEE 763

Query: 654 DVLDWRQSELVLANQPTFQPYEIKV----------------------------------- 678
            V   R+  L +     + PYE++V                                   
Sbjct: 764 TV---REHSLRVMTPAIYAPYEVQVQALNHLGAGPQPQSVVLHSGEDYPDAAPVIHGVDV 820

Query: 679 -------VQTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAY 726
                  +  W  K   DG    +E+ + +  G+ ++  +      S+    VLAFN   
Sbjct: 821 VNSTLAKINWWKTKSLADGRSLPKEVSILRFPGQRSSGMLPALDAFSEFHLTVLAFNAKG 880

Query: 727 NGPPSEIISFVTPEG 741
            GP SE   F TPEG
Sbjct: 881 AGPESEPYVFQTPEG 895



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 174/420 (41%), Gaps = 41/420 (9%)

Query: 41  KKEVALR-NKKVELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFS 97
           K++VA   ++  ++ C   G P P+  W+KDG P + SD   I+  N G   I    + +
Sbjct: 42  KEQVAFPFDEYFQIECEAKGNPEPRFTWTKDGKPFDLSDPRVIASNNSGTFRIPNEGQIA 101

Query: 98  D-QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPE 154
             QG Y C  SN +G A S  I+  V   P F  E  E +   E + +   C   +GLP 
Sbjct: 102 HFQGKYRCFASNKLGVAMSEEIEFIVPNVPKFPKEKIEPLEVEEGDPLVLPCNPPTGLPP 161

Query: 155 PEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-NSLGYVYKDVY 211
             I+W++   + I Q       + G   +   N+ + D+ N Y C A    L  + + + 
Sbjct: 162 LHIYWMNIELEHIQQDERVYMSQEG--DLYFANVEEHDSRNDYCCFAAFPRLRTIVQKMP 219

Query: 212 VNVLAHA-------------PEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK 257
           + +  ++             P +   P+   TV  G T+VL C   G P P+V W     
Sbjct: 220 MKLTVNSSNSIKQRKPSLLLPPVARGPESAVTVLRGDTLVLECFAEGLPTPQVGWEKVGG 279

Query: 258 ELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           +L  GR T    G  LKI +V++ D G Y C A N LG A     +TV+E    T +P+ 
Sbjct: 280 DLPKGRETKENYGKMLKIENVSYEDKGNYRCTANNFLGVATHDFHVTVEEPPRWTKKPQS 339

Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID---FESE---PRFVQSNDY--SLTV 368
                  S    C A  +P  +  I W     PI+   F  +   P  V   D   + T 
Sbjct: 340 GVYSTRSSGILLCEAEGEP--EPVIRWRVNGIPIEENPFAGDVVSPGEVSFTDLQPNHTA 397

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDAKKAVVSW 423
               E  +   T  A   +D ++ +  +  +       +   S F L +   + +A+VSW
Sbjct: 398 VYQCEASNAHGTILANANVDVVDVRPLIETEDEESYAAVAGSSAFLLCEFFASPQAMVSW 457



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 124/578 (21%), Positives = 215/578 (37%), Gaps = 76/578 (13%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
           L C F  +P     W K              +   +L I+     D G+Y+C V N  G+
Sbjct: 443 LLCEFFASPQAMVSWQKADAARPLEGPRYHVHTNGTLQIREATVEDAGAYSCWVENAQGK 502

Query: 113 AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP--EPEIH--WVHNGKPI-S 167
             + +  L +  A    V P         T+   C++   P  +P +   W   G    +
Sbjct: 503 T-AVTASLDIRNATRLQVSPRDPRVPRSHTLELHCESECDPHLKPSLRLTWSKGGAAFET 561

Query: 168 QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKD 227
               + R  +    +TI NL   D G Y C+A  +L     + +V VL    ++ + P++
Sbjct: 562 NGTEDGRILIDGAHLTISNLTLEDQGVYTCSAHTALDSAANETHVTVL----DVPDPPEN 617

Query: 228 EYTVD--GKTVVLTCRV--------------FGAPKPEVNWIHNQKELTGGRYTILETGD 271
               +   ++V LT                 F   + E         + GG  T+L T  
Sbjct: 618 LRLSERQNRSVRLTWDAGDSHNSNISGYVVEFEGNREEPGRWEQLAAVPGGETTVLLT-- 675

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI-----TDQPEDYEVEAGQSAT 326
                +A     ++   A N++G ++ S      EH           P++  V+A Q   
Sbjct: 676 -----LAPYVRYQFRVIAANEVGRSRPSRP---SEHHETPPAAPDKNPQNVRVQASQPKE 727

Query: 327 -------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQY 379
                   +    + P L+  + W    +P+    E       ++SL V   +     + 
Sbjct: 728 MVIRWEPLKSTEQNGPGLEYRVAW----KPLGALGEWEEETVREHSLRVMTPAIYAPYEV 783

Query: 380 TCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYK 439
             +A   L       ++ +    + P    +I  +D   + ++                K
Sbjct: 784 QVQALNHLGAGPQPQSVVLHSGEDYPDAAPVIHGVDVVNSTLA----------------K 827

Query: 440 VQTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
           +  W  K   DG    +E+ + +  G+ ++  +      S+    VLAFN    GP SE 
Sbjct: 828 INWWKTKSLADGRSLPKEVSILRFPGQRSSGMLPALDAFSEFHLTVLAFNAKGAGPESEP 887

Query: 495 ISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLL 553
             F TPEGVP     L+ I +      L W  P + NG L GY ++YQ +  T ++G L 
Sbjct: 888 YVFQTPEGVPEQPTFLKVIKVDKDTATLAWGPPRKLNGNLTGYLLQYQIINDTDEIGELN 947

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           +    I+ P+  S +L+ L  +TKY+ ++   T  G G
Sbjct: 948 DV--SITAPSKPSWRLSNLNATTKYKFYVRACTSRGCG 983



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 117/308 (37%), Gaps = 28/308 (9%)

Query: 118 IDLSVLAAPYFTVEP-EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPN--PR 174
           I LSV   P  T +  E +    +E    EC+A G PEP   W  +GKP   + P     
Sbjct: 27  IPLSVPQVPTITKQSKEQVAFPFDEYFQIECEAKGNPEPRFTWTKDGKPFDLSDPRVIAS 86

Query: 175 RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
              G  RI  E       G Y C A+N LG    +    ++ + P+  +   +   V +G
Sbjct: 87  NNSGTFRIPNEGQIAHFQGKYRCFASNKLGVAMSEEIEFIVPNVPKFPKEKIEPLEVEEG 146

Query: 234 KTVVLTCR-VFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFADS-GEYTCFA 289
             +VL C    G P   + W++ + E      R  + + GDL   +V   DS  +Y CFA
Sbjct: 147 DPLVLPCNPPTGLPPLHIYWMNIELEHIQQDERVYMSQEGDLYFANVEEHDSRNDYCCFA 206

Query: 290 ---RNKLGTAQGSGSLTVKEHTHITDQ------------PED-YEVEAGQSATFRCNAVS 333
              R +    +    LTV     I  +            PE    V  G +    C A  
Sbjct: 207 AFPRLRTIVQKMPMKLTVNSSNSIKQRKPSLLLPPVARGPESAVTVLRGDTLVLECFAEG 266

Query: 334 DPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393
            P+ ++    + G  P   E++  + +     L +   S  D G Y C A   L      
Sbjct: 267 LPTPQVGWEKVGGDLPKGRETKENYGK----MLKIENVSYEDKGNYRCTANNFLGVATHD 322

Query: 394 ATLTVQVP 401
             +TV+ P
Sbjct: 323 FHVTVEEP 330


>gi|47228707|emb|CAG07439.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 882

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 178/362 (49%), Gaps = 15/362 (4%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           ALR + +EL CI  G P P+  W +    ++ S R S+  + + L   ++  SD G Y C
Sbjct: 15  ALRGQTLELECIVQGLPTPKVSWLRRDGEMSES-RTSKEMFDRRLYFNNISESDGGEYQC 73

Query: 105 EVSNGVGE-AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
              N  G+   +Y++  +V A+PY+   P     A  ETV  +C+A G+P P I W  NG
Sbjct: 74  IAENSQGKIVHTYTV--TVEASPYWINAPASQLYAPGETVKLDCQADGIPPPTITWTVNG 131

Query: 164 KPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
            P+S     PRR +     + ++++   DT  Y C A+N  G +  +  V V+   P+I 
Sbjct: 132 VPLSATAVEPRRLLTDSGSLILKDVSFGDTAIYQCQASNKHGTILTNTNVYVIELPPQIL 191

Query: 223 EAPKDEYT-VDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAF 279
                 YT V+G+  VL C  FG+PKP+V W  +     L   R  +L  G L++++V+ 
Sbjct: 192 TEDGSTYTFVEGQKAVLECETFGSPKPKVTWESSSTSLPLADPRVNLLTNGGLEVSNVSH 251

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
            D G YTC  +N       S  L V   T I   P+   ++ G++A F C  ++DP L  
Sbjct: 252 DDEGIYTCSIQN--SNVSVSAELEVLNRTVILSPPQALRMQPGKTAIFTCMYITDPKLHS 309

Query: 340 SIVWLRGSEPIDFES---EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            ++  R ++   FES   E    +  D  L ++     D G YTC+  T+LD  EA + L
Sbjct: 310 PVLQWRKNDQKIFESHSDEKYTFEGPD--LIISNVEPGDEGVYTCQIITKLDMAEASSNL 367

Query: 397 TV 398
           T+
Sbjct: 368 TL 369



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 162/675 (24%), Positives = 272/675 (40%), Gaps = 95/675 (14%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPIN-----PSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           V+L C   G P P   W+ +GVP++     P   ++      SLI+K V F D   Y C+
Sbjct: 111 VKLDCQADGIPPPTITWTVNGVPLSATAVEPRRLLTDSG---SLILKDVSFGDTAIYQCQ 167

Query: 106 VSNGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
            SN  G   + + ++ V+  P    T +       E +    EC+  G P+P++ W  + 
Sbjct: 168 ASNKHGTILT-NTNVYVIELPPQILTEDGSTYTFVEGQKAVLECETFGSPKPKVTWESSS 226

Query: 164 KPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
             +  A  +PR  +  N  + + N+   D G Y C+  NS   V  ++ V    +   I 
Sbjct: 227 TSLPLA--DPRVNLLTNGGLEVSNVSHDDEGIYTCSIQNSNVSVSAELEV---LNRTVIL 281

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPK---PEVNWIHNQKEL----TGGRYTILETGDLKIT 275
             P+      GKT + TC     PK   P + W  N +++    +  +YT  E  DL I+
Sbjct: 282 SPPQALRMQPGKTAIFTCMYITDPKLHSPVLQWRKNDQKIFESHSDEKYT-FEGPDLIIS 340

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           +V   D G YTC    KL  A+ S +LT+     +  Q    E+         C+ V   
Sbjct: 341 NVEPGDEGVYTCQIITKLDMAEASSNLTLC-GKQLVGQILITEIMQTSHCGPTCHTVFG- 398

Query: 336 SLKLSI-------VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSG-----QYTCRA 383
           SL L I       +    ++ +  E + R +   D+   V     + SG     QYT   
Sbjct: 399 SLPLMIRAKATPAIHQTSTKHLPMEMDKRNLNGPDFKYRVMWRRVVGSGPDWHEQYTNAP 458

Query: 384 QTELDFIEAQATLTVQV-----------------------PLEAPSNFTLIQVIDAKKAV 420
              ++  +  +   ++V                       PLE P +  ++ + ++    
Sbjct: 459 PLIVNDTQNFSAFEIKVQAVNERGRGPEPDPVIGYSGEDVPLEPPLDVGIL-MENSTTIK 517

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           V+W P+  +++RG   GYK+  +  + G     +    +   +T  V       K     
Sbjct: 518 VTWAPIDKETVRGRLLGYKI--YLTRRGSRVHHQARRTQEPESTVVVQTGASEEKKLISD 575

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
           L    +Y+      I+ +     PG   SL       +   L W  P+QPNG+L+GY+++
Sbjct: 576 LQPFSSYD------IAVI-----PGPPMSLVLDSPSETEITLHWTPPDQPNGILIGYELQ 624

Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV 600
           YQ +  +   P+  ++    +P TTS  L GL+  + YR +L G T AG G         
Sbjct: 625 YQQIMQSDDSPM--QVEDKVNPQTTSLMLKGLDRHSHYRFYLMGRTAAGLGE-------- 674

Query: 601 PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTG---EAWNQDDVLD 657
           P K        G  P N+ +S       E    +  +    R  N G      N++D   
Sbjct: 675 PIKKDGATTLDGLPPANISLS------AEEKLVNLSWEARRRHRNIGFQIHYLNKNDGGQ 728

Query: 658 WRQSELVLANQPTFQ 672
           W+++E V ++Q  +Q
Sbjct: 729 WKKTEKVNSSQLFYQ 743



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 114/255 (44%), Gaps = 12/255 (4%)

Query: 136 NAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNY 195
           +A   +T+  EC   GLP P++ W+     +S++     +++   R+   N+ +SD G Y
Sbjct: 14  HALRGQTLELECIVQGLPTPKVSWLRRDGEMSES--RTSKEMFDRRLYFNNISESDGGEY 71

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            C A NS G +     V V A +P    AP  +    G+TV L C+  G P P + W  N
Sbjct: 72  QCIAENSQGKIVHTYTVTVEA-SPYWINAPASQLYAPGETVKLDCQADGIPPPTITWTVN 130

Query: 256 QKELTGG----RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEH--TH 309
              L+      R  + ++G L + DV+F D+  Y C A NK GT   + ++ V E     
Sbjct: 131 GVPLSATAVEPRRLLTDSGSLILKDVSFGDTAIYQCQASNKHGTILTNTNVYVIELPPQI 190

Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
           +T+    Y    GQ A   C     P  K  + W   S  +   ++PR     +  L V+
Sbjct: 191 LTEDGSTYTFVEGQKAVLECETFGSP--KPKVTWESSSTSLPL-ADPRVNLLTNGGLEVS 247

Query: 370 KSSELDSGQYTCRAQ 384
             S  D G YTC  Q
Sbjct: 248 NVSHDDEGIYTCSIQ 262



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 14/201 (6%)

Query: 229 YTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD--LKITDVAFADSGEYT 286
           + + G+T+ L C V G P P+V+W+    E++  R T  E  D  L   +++ +D GEY 
Sbjct: 14  HALRGQTLELECIVQGLPTPKVSWLRRDGEMSESR-TSKEMFDRRLYFNNISESDGGEYQ 72

Query: 287 CFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRG 346
           C A N  G    + ++TV+   +  + P       G++    C A   P    +I W   
Sbjct: 73  CIAENSQGKIVHTYTVTVEASPYWINAPASQLYAPGETVKLDCQADGIP--PPTITWTVN 130

Query: 347 SEPIDFES-EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV-----QV 400
             P+   + EPR + ++  SL +   S  D+  Y C+A  +   I     + V     Q+
Sbjct: 131 GVPLSATAVEPRRLLTDSGSLILKDVSFGDTAIYQCQASNKHGTILTNTNVYVIELPPQI 190

Query: 401 PLEAPSNFTLIQVIDAKKAVV 421
             E  S +T ++    +KAV+
Sbjct: 191 LTEDGSTYTFVE---GQKAVL 208


>gi|426339218|ref|XP_004033555.1| PREDICTED: contactin-6 isoform 1 [Gorilla gorilla gorilla]
          Length = 1028

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 180/715 (25%), Positives = 302/715 (42%), Gaps = 76/715 (10%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    + S+      L I + +  D+G Y 
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQ--AILEIPNFQQEDEGFYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C  SN  G   +    L   A P +  + +    +  + + +ECKASG P P   W+ NG
Sbjct: 297 CIASNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDNLLWECKASGKPNPWYTWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++   P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 356 ERLN---PEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSK 412

Query: 224 AP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
           +P  K  +   G  +V+ C+    P+  ++W    + L    R  +LE G LKI ++  +
Sbjct: 413 SPVKKKSFVQVGGDIVIGCKPNAFPRAAISWKRGTETLRQSKRIFLLEDGSLKIYNITRS 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ GTA+ +GSL VKE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 473 DAGSYTCIATNQFGTAKNTGSLIVKERTVITVPPSKMDVTVGESIVLPCQVSHDPSIEVV 532

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            VW    + ID +       R    +   L +       SG+Y C  QT L+ + A A +
Sbjct: 533 FVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADI 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW    P +     + + +QT T          ++
Sbjct: 593 IVRGPPGPPEDVQ-VEDISSTTSQLSWR-AGPDN-NSPIQIFTIQTRTPFSVGWQAVATV 649

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA 512
            E++   G++    V    P  +   RV+A N    G PS+    +  +     V  +  
Sbjct: 650 PEIL--NGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVNI 707

Query: 513 IPLGS--SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
              G   S   + W  +  E  NG   GY I ++ V  T      E++  + + +    +
Sbjct: 708 HGGGGSRSELVITWESIPEELQNGDGFGYIIMFRPVGSTTWSK--EKVSSV-ESSRFVYR 764

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS-----TPNNLVISWT 623
              + P + + + +  Y   G+G+ S        ++   +  RG+     + + + +SW 
Sbjct: 765 NESIIPLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSLQSFSASEMEVSWN 824

Query: 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWT 683
           A+                       AWN       R +  VL        YE   V  WT
Sbjct: 825 AI-----------------------AWN-------RNTGRVLG-------YE---VLYWT 844

Query: 684 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           +   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S  ++  T
Sbjct: 845 DDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGTGPSSPPVNVTT 898



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 163/660 (24%), Positives = 258/660 (39%), Gaps = 87/660 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC ++N   EA+      SV   P   V+                
Sbjct: 180 NLYIAKVEPSDVGNYTCFITNK--EAQR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 232

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ +V  EC A G P P+I W   +G P+   P   +       + I N ++
Sbjct: 233 FPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPL---PGKVKYSKSQAILEIPNFQQ 289

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A+N  G       + +    PE  +  ++ Y      ++  C+  G P P 
Sbjct: 290 EDEGFYECIASNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDNLLWECKASGKPNPW 348

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L       +E G L IT +  +DSG Y C A NK      +  L V     
Sbjct: 349 YTWLKNGERLNPEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAP 408

Query: 309 HITDQPEDYE--VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P   +  V+ G      C   + P  + +I W RG+E +      R     D SL
Sbjct: 409 DFSKSPVKKKSFVQVGGDIVIGCKPNAFP--RAAISWKRGTETL--RQSKRIFLLEDGSL 464

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV------ 420
            +   +  D+G YTC A  +    +   +L V+         T+I V  +K  V      
Sbjct: 465 KIYNITRSDAGSYTCIATNQFGTAKNTGSLIVK-------ERTVITVPPSKMDVTVGESI 517

Query: 421 -----VSWNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKF 470
                VS +P         F G  +         E+ G  S+ +L++   +       K+
Sbjct: 518 VLPCQVSHDPSIEVVFVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQ--LHHSGKY 575

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
           +   +     L+            ++ +   G PG  + ++   + S+   L W      
Sbjct: 576 LCTVQTTLESLS-----------AVADIIVRGPPGPPEDVQVEDISSTTSQLSWRAGPDN 624

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           N  +  + I  Q+     VG   +  +P I +  T +A + GL P  +Y   +      G
Sbjct: 625 NSPIQIFTI--QTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIG 682

Query: 590 DGAESK------YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  SK          VP   P N+ G G + + LVI+W ++PE   N   F Y I +R 
Sbjct: 683 IGEPSKPSELLRTKASVPVVAPVNIHGGGGSRSELVITWESIPEELQNGDGFGYIIMFRP 742

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
             +   W+++ V     S  V  N+      P+E+KV       +GEGS+  + IV  GE
Sbjct: 743 VGS-TTWSKEKVSSVESSRFVYRNESIIPLSPFEVKV--GVYNNEGEGSLSTVTIVYSGE 799



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 165/720 (22%), Positives = 281/720 (39%), Gaps = 97/720 (13%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  +NP +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 339  CKASGKPNPWYTWLKNGERLNPEERIQIEN--GTLIITMLNVSDSGVYQCAAENKY-QII 395

Query: 115  SYSIDLSVLA-APYFTVEP----EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
              + +L VLA AP F+  P     F+    +  +   CK +  P   I W    + + Q+
Sbjct: 396  YANAELRVLASAPDFSKSPVKKKSFVQVGGD--IVIGCKPNAFPRAAISWKRGTETLRQS 453

Query: 170  PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
                  + G   + I N+ +SD G+Y C ATN  G   K+    ++     IT  P    
Sbjct: 454  KRIFLLEDG--SLKIYNITRSDAGSYTCIATNQFGTA-KNTGSLIVKERTVITVPPSKMD 510

Query: 230  TVDGKTVVLTCRVFGAPKPEVN--WIHN-----------QKELTGGRYTILETGDLKITD 276
               G+++VL C+V   P  EV   W  N             E  GG       GDL I +
Sbjct: 511  VTVGESIVLPCQVSHDPSIEVVFVWFFNGDVIDLKKGVAHFERIGGE----SVGDLMIRN 566

Query: 277  VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSD 334
            +    SG+Y C  +  L +      + V+        PED +VE   S T + +  A  D
Sbjct: 567  IQLHHSGKYLCTVQTTLESLSAVADIIVRGPP---GPPEDVQVEDISSTTSQLSWRAGPD 623

Query: 335  PSLKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
             +  + I  ++   P         + P  +    Y+ TV   S     ++   A   +  
Sbjct: 624  NNSPIQIFTIQTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGI 683

Query: 390  IEAQA-----TLTVQVPLEAPSNFTLIQVIDAKKA--VVSWNPVSPQSLRGHFRGYKVQ- 441
             E             VP+ AP N   I      ++  V++W  +  +   G   GY +  
Sbjct: 684  GEPSKPSELLRTKASVPVVAPVN---IHGGGGSRSELVITWESIPEELQNGDGFGYIIMF 740

Query: 442  ------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
                  TW+++          V + ES        +P S    +V  +N    G  S + 
Sbjct: 741  RPVGSTTWSKEKVSSVESSRFVYRNES-------IIPLSPFEVKVGVYNNEGEGSLSTVT 793

Query: 496  SFVTPEGVP------GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGT 547
               + E  P       ++QS  A  +  S   + W    +  G ++GY++ Y     K +
Sbjct: 794  IVYSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDSKES 850

Query: 548  KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PF 602
             +G +      +S   TT   + GL+ +T Y   +  Y  AG G  S  +        P 
Sbjct: 851  MIGKI-----RVSGNVTTK-NITGLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPS 904

Query: 603  KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ-- 660
            + P N+  +  T + L ++W  +  +E+ +    Y+I +R++      ++  +L+     
Sbjct: 905  QPPANIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQNRQ----SKTHILETNNTS 959

Query: 661  SELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 720
            +EL++   P  + Y I++       DG  S  E+ + K  S ++   +F+  S +F  ++
Sbjct: 960  AELLV---PFEEDYLIEIRTVSDGGDGSSS-EEIRIPKMSSLSSRGIQFLEPSTHFLSIV 1015



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 104/286 (36%), Gaps = 32/286 (11%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L+ P FT EP    F     +  V   C A+  P P   W  NG  I        R  G
Sbjct: 22  LLSRPIFTQEPHDVIFPLDLSKSEVILNCAANSYPSPHYRWKQNGTDIDFTMSYHYRLDG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            +          D G Y C ATN LG +         A+  +     +   +V +G+ VV
Sbjct: 82  GSLAINSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        W  N   L       R+   ETG+L I  V  +D G YTCF
Sbjct: 142 LLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCF 197

Query: 289 ARNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSL 337
             NK    + QG  +  V+    +  +         PE  +     S    C A+ +P  
Sbjct: 198 ITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            +S   L GS       + ++ +S    L +    + D G Y C A
Sbjct: 258 DISWRRLDGSP---LPGKVKYSKSQAI-LEIPNFQQEDEGFYECIA 299


>gi|330688421|ref|NP_001178388.1| contactin-6 precursor [Bos taurus]
          Length = 1030

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 185/716 (25%), Positives = 309/716 (43%), Gaps = 78/716 (10%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    + S+      L I + +  D+G Y 
Sbjct: 239 AAKDSSVKLECFALGNPIPDISWRRLDGSPLPGKVKYSKSQ--AILEIPNFQQEDEGFYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C  SN  G   +    L   A P +  + +    +  +++ +ECKASG P+P   W+ NG
Sbjct: 297 CIASNLRGRNLAKG-QLIFYAPPEWEQKIQDTYLSIYDSLFWECKASGKPDPWYTWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++    + R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 356 ERLNL---DERIQIENGTLIITMLNVSDSGIYQCAAENKYQIIYANAELRVLASAPDFSK 412

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
            P  +Y+V   G  +V+ C+    P+  ++W    + L    R  +LE G LKI +V  +
Sbjct: 413 NPLKKYSVVQVGGDIVIECKPNAFPRATISWKRGIESLRQSKRVFLLEDGSLKIYNVTRS 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A+ +GSL +KE T IT  P   +V  G+S    C    DPS+ + 
Sbjct: 473 DAGLYTCIATNQFGVAKNTGSLIIKERTVITVPPSTMDVTVGESIVLPCQVSRDPSVDVV 532

Query: 341 IVWLRGSEPIDF-ESEPRFVQSNDYSL--TVTKSSELD-SGQYTCRAQTELDFIEAQATL 396
            VW    + IDF +    F +    S+   + ++ +L+ SG+Y C  +T L+ + A   +
Sbjct: 533 FVWSFNGDVIDFKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSADGDI 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-----WTEKDGEGS 451
            V+ P   P +   ++ I +    +SW P S  +        + +T     W       +
Sbjct: 593 IVRGPPGPPEDVR-VKHISSTTCQLSWRPGSDNNSPIQIFSIQARTPFSVGW---QAVST 648

Query: 452 IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSL 510
           + E++   G++    V    P  +   RV+A N    G PS+    + T   VP    + 
Sbjct: 649 VPEIL--NGKTFNATVVGLNPWVEYEFRVVAGNSIGIGEPSKPSELLRTKSSVPAVAPTN 706

Query: 511 EAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSA 567
                GS S   + W  +  E  NG   GY +  + V  T      ER+P + + +    
Sbjct: 707 INGGGGSRSELIITWESIPEELQNGEDFGYIVMLRPVGSTTWTK--ERVPSV-ESSRFIY 763

Query: 568 KLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS-----TPNNLVISW 622
           +   + P + + I +  Y K G+G  S        ++   +  RG+     + + + +SW
Sbjct: 764 RNENIIPLSPFEIKVGVYNKEGEGPLSTASIIYSGEDEPQLAPRGTSVQSFSASEMEVSW 823

Query: 623 TAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTW 682
            A+                       AWN       R +  VL        YE   V  W
Sbjct: 824 NAI-----------------------AWN-------RNTGRVLG-------YE---VLYW 843

Query: 683 TEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           T+   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S  ++  T
Sbjct: 844 TDDSKESMIGKIRVS-GNITTKNITGLKANTVYFASVRAYNTAGTGPSSPPVNVTT 898



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 158/643 (24%), Positives = 249/643 (38%), Gaps = 72/643 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC ++N   EA+      SV   P   V+                
Sbjct: 180 NLYIAKVEPSDVGNYTCFITN--KEAQR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 232

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ +V  EC A G P P+I W   +G P+   P   +       + I N ++
Sbjct: 233 FPETIQAAKDSSVKLECFALGNPIPDISWRRLDGSPL---PGKVKYSKSQAILEIPNFQQ 289

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A+N  G       + +    PE  +  +D Y     ++   C+  G P P 
Sbjct: 290 EDEGFYECIASNLRGRNLAKGQL-IFYAPPEWEQKIQDTYLSIYDSLFWECKASGKPDPW 348

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L       +E G L IT +  +DSG Y C A NK      +  L V     
Sbjct: 349 YTWLKNGERLNLDERIQIENGTLIITMLNVSDSGIYQCAAENKYQIIYANAELRVLASAP 408

Query: 309 HITDQP-EDYE-VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P + Y  V+ G      C   + P  + +I W RG E        R     D SL
Sbjct: 409 DFSKNPLKKYSVVQVGGDIVIECKPNAFP--RATISWKRGIE--SLRQSKRVFLLEDGSL 464

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ--VPLEAPSNFTLIQVIDA--KKAVVS 422
            +   +  D+G YTC A  +    +   +L ++    +  P +   + V ++      VS
Sbjct: 465 KIYNVTRSDAGLYTCIATNQFGVAKNTGSLIIKERTVITVPPSTMDVTVGESIVLPCQVS 524

Query: 423 WNPVSPQSLRGHFRG-----YKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 477
            +P         F G      K     E+ G  S+ +L++   +       K++   K  
Sbjct: 525 RDPSVDVVFVWSFNGDVIDFKKGMAHFERIGGESVGDLMIRNIQ--LNHSGKYLCTVKTT 582

Query: 478 ARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
              L+ +G            +   G PG  + +    + S+   L W      N  +  +
Sbjct: 583 LESLSADGD-----------IIVRGPPGPPEDVRVKHISSTTCQLSWRPGSDNNSPIQIF 631

Query: 538 KIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK- 595
            I  Q+     VG   +  +P I +  T +A + GL P  +Y   +      G G  SK 
Sbjct: 632 SI--QARTPFSVGWQAVSTVPEILNGKTFNATVVGLNPWVEYEFRVVAGNSIGIGEPSKP 689

Query: 596 -----YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
                    VP   P N+ G G + + L+I+W ++PE   N   F Y +  R   +   W
Sbjct: 690 SELLRTKSSVPAVAPTNINGGGGSRSELIITWESIPEELQNGEDFGYIVMLRPVGS-TTW 748

Query: 651 NQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSI 691
            ++ V     S  +  N+      P+EIKV      K+GEG +
Sbjct: 749 TKERVPSVESSRFIYRNENIIPLSPFEIKV--GVYNKEGEGPL 789



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 145/638 (22%), Positives = 246/638 (38%), Gaps = 79/638 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +N  +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 339 CKASGKPDPWYTWLKNGERLNLDERIQIEN--GTLIITMLNVSDSGIYQCAAENKY-QII 395

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
             + +L VLA AP F+  P  ++        +  ECK +  P   I W    + + Q+  
Sbjct: 396 YANAELRVLASAPDFSKNPLKKYSVVQVGGDIVIECKPNAFPRATISWKRGIESLRQSKR 455

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
               + G   + I N+ +SD G Y C ATN  G V K+    ++     IT  P      
Sbjct: 456 VFLLEDG--SLKIYNVTRSDAGLYTCIATNQFG-VAKNTGSLIIKERTVITVPPSTMDVT 512

Query: 232 DGKTVVLTCRVFGAPKPEVNWIHN-------------QKELTGGRYTILETGDLKITDVA 278
            G+++VL C+V   P  +V ++ +               E  GG       GDL I ++ 
Sbjct: 513 VGESIVLPCQVSRDPSVDVVFVWSFNGDVIDFKKGMAHFERIGGE----SVGDLMIRNIQ 568

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSDPS 336
              SG+Y C  +  L +    G + V+        PED  V+   S T + +    SD +
Sbjct: 569 LNHSGKYLCTVKTTLESLSADGDIIVRGPP---GPPEDVRVKHISSTTCQLSWRPGSDNN 625

Query: 337 LKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
             + I  ++   P         + P  +    ++ TV   +     ++   A   +   E
Sbjct: 626 SPIQIFSIQARTPFSVGWQAVSTVPEILNGKTFNATVVGLNPWVEYEFRVVAGNSIGIGE 685

Query: 392 AQATLTV-----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ----- 441
                 +      VP  AP+N          + +++W  +  +   G   GY V      
Sbjct: 686 PSKPSELLRTKSSVPAVAPTNINGGGG-SRSELIITWESIPEELQNGEDFGYIVMLRPVG 744

Query: 442 --TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
             TWT++          + + E+        +P S    +V  +N    GP S      +
Sbjct: 745 STTWTKERVPSVESSRFIYRNEN-------IIPLSPFEIKVGVYNKEGEGPLSTASIIYS 797

Query: 500 PEGVP------GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKVGP 551
            E  P       +VQS  A  +  S   + W    +  G ++GY++ Y     K + +G 
Sbjct: 798 GEDEPQLAPRGTSVQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDSKESMIGK 854

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPD 606
           +      +S   TT   + GL+ +T Y   +  Y  AG G  S  +        P + P 
Sbjct: 855 I-----RVSGNITTK-NITGLKANTVYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPA 908

Query: 607 NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           N+  +  T + L ++W  +  +E+ +    Y+I +R++
Sbjct: 909 NIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQN 945



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 133/379 (35%), Gaps = 42/379 (11%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS-DQGSYTC 104
           L   ++ L C   G PLP   W  +G  I+ S        G SL I       D G+Y C
Sbjct: 41  LSKSEIILNCAANGYPLPHYRWKHNGADIDFSMSYHYRLDGGSLAISSPRTDQDIGTYQC 100

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPEI-----H 158
             +N +G   S    L       F T     ++  E + V   C     P P        
Sbjct: 101 LATNSLGTILSQKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCG----PPPHFGDLSYA 156

Query: 159 WVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------- 205
           W  N  P+     N RR V      + I  +  SD GNY C  TN               
Sbjct: 157 WTFNDNPLYVQEDN-RRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPPTPLV 215

Query: 206 -----VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKEL 259
                V  +    +    PE  +A KD       +V L C   G P P+++W   +   L
Sbjct: 216 QRTDGVMGEYEPKIEVRFPETIQAAKD------SSVKLECFALGNPIPDISWRRLDGSPL 269

Query: 260 TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEV 319
            G          L+I +    D G Y C A N  G     G L          + +D  +
Sbjct: 270 PGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPPEWEQKIQDTYL 329

Query: 320 EAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQY 379
               S  + C A   P    +  WL+  E ++ +     +Q  + +L +T  +  DSG Y
Sbjct: 330 SIYDSLFWECKASGKPDPWYT--WLKNGERLNLDER---IQIENGTLIITMLNVSDSGIY 384

Query: 380 TCRAQTELDFIEAQATLTV 398
            C A+ +   I A A L V
Sbjct: 385 QCAAENKYQIIYANAELRV 403



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 108/285 (37%), Gaps = 32/285 (11%)

Query: 123 LAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGP 179
           L+ P FT EP+   F     +  +   C A+G P P   W HNG  I  +     R  G 
Sbjct: 23  LSPPIFTQEPQDAIFPLDLSKSEIILNCAANGYPLPHYRWKHNGADIDFSMSYHYRLDGG 82

Query: 180 NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVL 238
           +          D G Y C ATNSLG +         A+  +     +   +V +G+ VVL
Sbjct: 83  SLAISSPRTDQDIGTYQCLATNSLGTILSQKAKLQFAYIEDFETKTRSTVSVREGQGVVL 142

Query: 239 TCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCFA 289
            C     P P        W  N   L       R+   ETG+L I  V  +D G YTCF 
Sbjct: 143 LC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFI 198

Query: 290 RNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSLK 338
            NK    + QG  +  V+    +  +         PE  +     S    C A+ +P   
Sbjct: 199 TNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPIPD 258

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +S   L GS       + ++ +S    L +    + D G Y C A
Sbjct: 259 ISWRRLDGSP---LPGKVKYSKSQAI-LEIPNFQQEDEGFYECIA 299



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 14/190 (7%)

Query: 409 TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
           T +Q   A +  VSWN ++     G   GY+V  WT+   E  I ++ V+ G  TT  + 
Sbjct: 809 TSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVS-GNITTKNIT 867

Query: 469 KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VK 526
                +  FA V A+N A  GP S  ++  T +  P    +  A  L +S   L W  VK
Sbjct: 868 GLKANTVYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLTNSKLCLNWEHVK 927

Query: 527 PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGY 585
             +    ++GYKI Y+  + +K         +I +   TSA+L  L P    Y I +   
Sbjct: 928 TMENESEVLGYKILYRQNRQSKT--------HILETNNTSAEL--LVPFEEDYLIEIRTV 977

Query: 586 TKAGDGAESK 595
           +  GDG+ S+
Sbjct: 978 SDGGDGSSSE 987


>gi|444516815|gb|ELV11290.1| Contactin-1, partial [Tupaia chinensis]
          Length = 886

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 184/725 (25%), Positives = 294/725 (40%), Gaps = 84/725 (11%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K    L  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 119 PADIIVQFKDIYTLMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 176

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 177 NIQLEDEGLYECEAENIKGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 232

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 233 TGKPIPTIRWLKNGYAYHKG------ELRLYDVTFEN-----AGMYQCIAENTHGAIYAN 281

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 282 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 341

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 342 WEDGSLEINNITRNDGGVYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENAT 401

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ +W      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 402 MQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 461

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            AQT +D   A A L V+ P   P     I+ I A    ++W+  S          Y +Q
Sbjct: 462 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYTIQ 518

Query: 442 TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           T T    D + +  +  + +G     +    +P  +   RV+A N    G PS   + + 
Sbjct: 519 TKTILSDDWKDAKTDPPIIEGNMEAAKAVDLIPWMEYEFRVVATNTLGIGEPSIPSNRIK 578

Query: 500 PEGVPGTVQSLEAIPLGSS--AFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
            +G    V   +    G S     + W  +  E   G   GY + ++   G +   +   
Sbjct: 579 TDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGVEWKKVT-- 636

Query: 556 LPYISDPTTTS--AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS 613
              +++P T     K   + PST +++ +  +   GDG  S  L  V     D       
Sbjct: 637 ---VTNPETGRYVHKDETMSPSTAFQVKVKAFNSKGDGPYS--LIAVINSAQD---APSE 688

Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
            P  + +   +  EI  +  H   +I                                + 
Sbjct: 689 APTEVGVKVLSSSEISVHWKHVLEKI-------------------------------VES 717

Query: 674 YEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 733
           Y+I+    W   D E +   + V   E  +  ++  +P ++ F  V A N A  GPPS++
Sbjct: 718 YQIRY---WAAHDKEAAAHRVQVTSQE-YSARLENLLPDTQYFVEVGACNSAGCGPPSDV 773

Query: 734 ISFVT 738
           I   T
Sbjct: 774 IETFT 778



 Score = 44.3 bits (103), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+    ++V+ + +  V W  V    L      Y+++ W   D E +   + V   
Sbjct: 686 PSEAPTEVG-VKVLSSSEISVHWKHV----LEKIVESYQIRYWAAHDKEAAAHRVQVTSQ 740

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GPPS++I   T +  P     + +     S +
Sbjct: 741 E-YSARLENLLPDTQYFVEVGACNSAGCGPPSDVIETFTKKAPPSQPPRIISSIRSGSRY 799

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYK+ Y+
Sbjct: 800 IITWDHVVALSNESTVTGYKVLYR 823


>gi|426339222|ref|XP_004033557.1| PREDICTED: contactin-6 isoform 3 [Gorilla gorilla gorilla]
          Length = 1019

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 180/715 (25%), Positives = 302/715 (42%), Gaps = 76/715 (10%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    + S+      L I + +  D+G Y 
Sbjct: 230 AAKDSSVKLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQ--AILEIPNFQQEDEGFYE 287

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C  SN  G   +    L   A P +  + +    +  + + +ECKASG P P   W+ NG
Sbjct: 288 CIASNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDNLLWECKASGKPNPWYTWLKNG 346

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++   P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 347 ERLN---PEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSK 403

Query: 224 AP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
           +P  K  +   G  +V+ C+    P+  ++W    + L    R  +LE G LKI ++  +
Sbjct: 404 SPVKKKSFVQVGGDIVIGCKPNAFPRAAISWKRGTETLRQSKRIFLLEDGSLKIYNITRS 463

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ GTA+ +GSL VKE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 464 DAGSYTCIATNQFGTAKNTGSLIVKERTVITVPPSKMDVTVGESIVLPCQVSHDPSIEVV 523

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            VW    + ID +       R    +   L +       SG+Y C  QT L+ + A A +
Sbjct: 524 FVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADI 583

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW    P +     + + +QT T          ++
Sbjct: 584 IVRGPPGPPEDVQ-VEDISSTTSQLSWR-AGPDN-NSPIQIFTIQTRTPFSVGWQAVATV 640

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA 512
            E++   G++    V    P  +   RV+A N    G PS+    +  +     V  +  
Sbjct: 641 PEIL--NGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVNI 698

Query: 513 IPLGS--SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
              G   S   + W  +  E  NG   GY I ++ V  T      E++  + + +    +
Sbjct: 699 HGGGGSRSELVITWESIPEELQNGDGFGYIIMFRPVGSTTWSK--EKVSSV-ESSRFVYR 755

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS-----TPNNLVISWT 623
              + P + + + +  Y   G+G+ S        ++   +  RG+     + + + +SW 
Sbjct: 756 NESIIPLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSLQSFSASEMEVSWN 815

Query: 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWT 683
           A+                       AWN       R +  VL        YE   V  WT
Sbjct: 816 AI-----------------------AWN-------RNTGRVLG-------YE---VLYWT 835

Query: 684 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           +   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S  ++  T
Sbjct: 836 DDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGTGPSSPPVNVTT 889



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 163/660 (24%), Positives = 258/660 (39%), Gaps = 87/660 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC ++N   EA+      SV   P   V+                
Sbjct: 171 NLYIAKVEPSDVGNYTCFITNK--EAQR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 223

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ +V  EC A G P P+I W   +G P+   P   +       + I N ++
Sbjct: 224 FPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPL---PGKVKYSKSQAILEIPNFQQ 280

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A+N  G       + +    PE  +  ++ Y      ++  C+  G P P 
Sbjct: 281 EDEGFYECIASNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDNLLWECKASGKPNPW 339

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L       +E G L IT +  +DSG Y C A NK      +  L V     
Sbjct: 340 YTWLKNGERLNPEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAP 399

Query: 309 HITDQPEDYE--VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P   +  V+ G      C   + P  + +I W RG+E +      R     D SL
Sbjct: 400 DFSKSPVKKKSFVQVGGDIVIGCKPNAFP--RAAISWKRGTETL--RQSKRIFLLEDGSL 455

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV------ 420
            +   +  D+G YTC A  +    +   +L V+         T+I V  +K  V      
Sbjct: 456 KIYNITRSDAGSYTCIATNQFGTAKNTGSLIVK-------ERTVITVPPSKMDVTVGESI 508

Query: 421 -----VSWNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKF 470
                VS +P         F G  +         E+ G  S+ +L++   +       K+
Sbjct: 509 VLPCQVSHDPSIEVVFVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQ--LHHSGKY 566

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
           +   +     L+            ++ +   G PG  + ++   + S+   L W      
Sbjct: 567 LCTVQTTLESLS-----------AVADIIVRGPPGPPEDVQVEDISSTTSQLSWRAGPDN 615

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           N  +  + I  Q+     VG   +  +P I +  T +A + GL P  +Y   +      G
Sbjct: 616 NSPIQIFTI--QTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIG 673

Query: 590 DGAESK------YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  SK          VP   P N+ G G + + LVI+W ++PE   N   F Y I +R 
Sbjct: 674 IGEPSKPSELLRTKASVPVVAPVNIHGGGGSRSELVITWESIPEELQNGDGFGYIIMFRP 733

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
             +   W+++ V     S  V  N+      P+E+KV       +GEGS+  + IV  GE
Sbjct: 734 VGS-TTWSKEKVSSVESSRFVYRNESIIPLSPFEVKV--GVYNNEGEGSLSTVTIVYSGE 790



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 166/718 (23%), Positives = 279/718 (38%), Gaps = 93/718 (12%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  +NP +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 330  CKASGKPNPWYTWLKNGERLNPEERIQIEN--GTLIITMLNVSDSGVYQCAAENKY-QII 386

Query: 115  SYSIDLSVLA-APYFTVEP----EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
              + +L VLA AP F+  P     F+    +  +   CK +  P   I W    + + Q+
Sbjct: 387  YANAELRVLASAPDFSKSPVKKKSFVQVGGD--IVIGCKPNAFPRAAISWKRGTETLRQS 444

Query: 170  PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
                  + G   + I N+ +SD G+Y C ATN  G   K+    ++     IT  P    
Sbjct: 445  KRIFLLEDG--SLKIYNITRSDAGSYTCIATNQFGTA-KNTGSLIVKERTVITVPPSKMD 501

Query: 230  TVDGKTVVLTCRVFGAPKPEVN--WIHN-----------QKELTGGRYTILETGDLKITD 276
               G+++VL C+V   P  EV   W  N             E  GG       GDL I +
Sbjct: 502  VTVGESIVLPCQVSHDPSIEVVFVWFFNGDVIDLKKGVAHFERIGGE----SVGDLMIRN 557

Query: 277  VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSD 334
            +    SG+Y C  +  L +      + V+        PED +VE   S T + +  A  D
Sbjct: 558  IQLHHSGKYLCTVQTTLESLSAVADIIVRGPP---GPPEDVQVEDISSTTSQLSWRAGPD 614

Query: 335  PSLKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
             +  + I  ++   P         + P  +    Y+ TV   S     ++   A   +  
Sbjct: 615  NNSPIQIFTIQTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGI 674

Query: 390  IEAQA-----TLTVQVPLEAPSNFTLIQVIDAKKA--VVSWNPVSPQSLRGHFRGYKVQ- 441
             E             VP+ AP N   I      ++  V++W  +  +   G   GY +  
Sbjct: 675  GEPSKPSELLRTKASVPVVAPVN---IHGGGGSRSELVITWESIPEELQNGDGFGYIIMF 731

Query: 442  ------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
                  TW+++          V + ES        +P S    +V  +N    G  S + 
Sbjct: 732  RPVGSTTWSKEKVSSVESSRFVYRNES-------IIPLSPFEVKVGVYNNEGEGSLSTVT 784

Query: 496  SFVTPEGVP-----GT-VQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGT 547
               + E  P     GT +QS  A  +  S   + W    +  G ++GY++ Y     K +
Sbjct: 785  IVYSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDSKES 841

Query: 548  KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PF 602
             +G +      +S   TT   + GL+ +T Y   +  Y  AG G  S  +        P 
Sbjct: 842  MIGKI-----RVSGNVTTK-NITGLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPS 895

Query: 603  KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
            + P N+  +  T + L ++W  +  +E+ +    Y+I +R++      ++  +L+   + 
Sbjct: 896  QPPANIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQNRQ----SKTHILETNNTS 950

Query: 663  LVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 720
              L   P  + Y I++       DG  S  E+ + K  S ++   +F+  S +F  ++
Sbjct: 951  AELL-VPFEEDYLIEIRTVSDGGDGSSS-EEIRIPKMSSLSSRGIQFLEPSTHFLSIV 1006



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 106/291 (36%), Gaps = 32/291 (10%)

Query: 117 SIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           S+   +L+ P FT EP    F     +  V   C A+  P P   W  NG  I       
Sbjct: 8   SLGDGLLSRPIFTQEPHDVIFPLDLSKSEVILNCAANSYPSPHYRWKQNGTDIDFTMSYH 67

Query: 174 RRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-D 232
            R  G +          D G Y C ATN LG +         A+  +     +   +V +
Sbjct: 68  YRLDGGSLAINSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVRE 127

Query: 233 GKTVVLTCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSG 283
           G+ VVL C     P P        W  N   L       R+   ETG+L I  V  +D G
Sbjct: 128 GQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVG 183

Query: 284 EYTCFARNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAV 332
            YTCF  NK    + QG  +  V+    +  +         PE  +     S    C A+
Sbjct: 184 NYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFAL 243

Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            +P   +S   L GS       + ++ +S    L +    + D G Y C A
Sbjct: 244 GNPVPDISWRRLDGSP---LPGKVKYSKSQAI-LEIPNFQQEDEGFYECIA 290


>gi|383857080|ref|XP_003704034.1| PREDICTED: protein sidekick-like [Megachile rotundata]
          Length = 2176

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 167/625 (26%), Positives = 254/625 (40%), Gaps = 88/625 (14%)

Query: 53  LFCIFGGTPLPQ--TIWSKDGVPINPSDRIS---QGNYGKSLIIKHVEFSDQGSYTCEVS 107
           + CI     L +  T+W+KDG+PI  S RIS     ++ ++L +     +  G Y+C V 
Sbjct: 254 IHCIANARSLHELRTLWTKDGIPIENS-RISYSFNDSWNRTLALMSANITYTGVYSCHVD 312

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET-------VTFECKASGLPEPEIHWV 160
              G   + +    V+       +P FI   + ET       VT  C A G+P P I W 
Sbjct: 313 LRSGGYPTVNASAKVVVYE----KPAFITELKRETLSDYGSTVTLPCDAVGVPPPNISWF 368

Query: 161 HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
            N +P+     +         +TI+ L   D+G + C A N +G      ++      P 
Sbjct: 369 RNAEPVDHLLGSRYAMEEDGSLTIKKLTMDDSGMFQCLAANEVGEASSYTWLKAKTSGPI 428

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK---ELTGGRYTILETGDLKITDV 277
           +   P++   +DGK   L+C    AP P   WI+N     E+  GR  +L+ GDL I  V
Sbjct: 429 MENGPQNLTILDGKDATLSCNAVAAPIPNTTWIYNDTIPVEI-AGRVQVLDNGDLLIAAV 487

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
              D+G+YTC   N+ G+  GS  LTV   T I   P D  V  G +A  +C   +DPS+
Sbjct: 488 KPNDAGKYTCIRANEAGSVNGSAYLTVLVRTQIVQPPVDTSVLLGYTAELQCKVSNDPSV 547

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
              I W   S+ I+ ++  R    +D +L +      D G+Y C   +        A L+
Sbjct: 548 LYDIAWFHNSQVINTQASQRVKMRSDGTLEIVAVRASDVGEYMCSVVSPGGNETRSARLS 607

Query: 398 V-QVPLEAPSNFTLIQV--IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRE 454
           V ++P  AP N    +V  I  +   VSW P           G+        DG    ++
Sbjct: 608 VIELPF-APINVMADRVERISPRTINVSWVP-----------GF--------DGNSPTKK 647

Query: 455 LIVNKGEST------------TTEVDKFVPASK-----NFA-------RVLAFNGAYNGP 490
            IV + E +             TE D     S+     N         RV A N    GP
Sbjct: 648 FIVQRREVSDLGPIPDSALNWITECDNVSAQSRWVLLNNLKAAAAYQFRVSAENSVGEGP 707

Query: 491 PSEIISFVT-----PEGVP-GTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQ 542
           PS+  + V      P G P G V S  +    SS    +W  P  E  NG ++GY ++Y+
Sbjct: 708 PSDPSNVVALPQEPPSGPPVGFVGSARS----SSEIITQWQLPLEEYRNGHILGYVLRYR 763

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY--- 599
            + G    P    +  I++    +  +  L     Y + +A Y   G G  ++ L     
Sbjct: 764 -LYGYNDSPWT--IQNITNEAQRNYLITDLITWKDYIVQIAAYNDKGVGVFTEGLKIKTK 820

Query: 600 --VPFKNPDNVEGRGSTPNNLVISW 622
             VP   P NV  +      + + W
Sbjct: 821 EGVPEAPPTNVRAKAVNSTAIKVWW 845



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 152/620 (24%), Positives = 239/620 (38%), Gaps = 89/620 (14%)

Query: 34  KQQYVTRKKEVALRN--KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGK---- 87
           K  ++T  K   L +    V L C   G P P   W ++  P+   D +    Y      
Sbjct: 332 KPAFITELKRETLSDYGSTVTLPCDAVGVPPPNISWFRNAEPV---DHLLGSRYAMEEDG 388

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
           SL IK +   D G + C  +N VGEA SY+   +  + P     P+ +   + +  T  C
Sbjct: 389 SLTIKKLTMDDSGMFQCLAANEVGEASSYTWLKAKTSGPIMENGPQNLTILDGKDATLSC 448

Query: 148 KASGLPEPEIHWVHNGK-PISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGY 205
            A   P P   W++N   P+  A    R +V  N  + I  ++ +D G Y C   N  G 
Sbjct: 449 NAVAAPIPNTTWIYNDTIPVEIAG---RVQVLDNGDLLIAAVKPNDAGKYTCIRANEAGS 505

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKEL---T 260
           V    Y+ VL    +I + P D   + G T  L C+V   P    ++ W HN + +    
Sbjct: 506 VNGSAYLTVLVRT-QIVQPPVDTSVLLGYTAELQCKVSNDPSVLYDIAWFHNSQVINTQA 564

Query: 261 GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH-----ITDQPE 315
             R  +   G L+I  V  +D GEY C   +  G    S  L+V E        + D+ E
Sbjct: 565 SQRVKMRSDGTLEIVAVRASDVGEYMCSVVSPGGNETRSARLSVIELPFAPINVMADRVE 624

Query: 316 DYEVEA----------GQSAT----FRCNAVSD--PSLKLSIVWLRGSEPIDFESEPRFV 359
                           G S T     +   VSD  P    ++ W+  +E  +  ++ R+V
Sbjct: 625 RISPRTINVSWVPGFDGNSPTKKFIVQRREVSDLGPIPDSALNWI--TECDNVSAQSRWV 682

Query: 360 QSNDYSLTVTKSSELDSGQYTCRAQTELDFIE---AQATLTVQVPLEAPSNFTLIQVIDA 416
             N+            +  Y  R   E    E   +  +  V +P E PS   +  V  A
Sbjct: 683 LLNNLKA---------AAAYQFRVSAENSVGEGPPSDPSNVVALPQEPPSGPPVGFVGSA 733

Query: 417 KKA---VVSWNPVSPQSLRGHFRGY--KVQTWTEKDGEGSIRELIVNKGESTTTEVDKFV 471
           + +   +  W     +   GH  GY  + + +   D   +I+  I N+ +      D  +
Sbjct: 734 RSSSEIITQWQLPLEEYRNGHILGYVLRYRLYGYNDSPWTIQN-ITNEAQRNYLITD-LI 791

Query: 472 PASKNFARVLAFNGAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWV--KPE 528
                  ++ A+N    G  +E +   T EGVP     ++ A  + S+A  + W    P+
Sbjct: 792 TWKDYIVQIAAYNDKGVGVFTEGLKIKTKEGVPEAPPTNVRAKAVNSTAIKVWWKPPNPQ 851

Query: 529 QPNGVLMGYKI--------------KYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
           + NG+  GYK+              K  SV  +   PL E+          SA + GL  
Sbjct: 852 KINGINQGYKLQAWIGSNFTEANEYKSMSVPPSLFDPLAEQ----------SAIMTGLRK 901

Query: 575 STKYRIHLAGYTKAGDGAES 594
            T Y I +  +T  GDG  S
Sbjct: 902 YTLYNITVLCFTDPGDGERS 921



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 100/408 (24%), Positives = 159/408 (38%), Gaps = 44/408 (10%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           N+   L C   G P P+  W KDGVP+  S+ ++   Y +   I+     D G Y C  +
Sbjct: 61  NRTKFLQCQARGYPQPKYKWFKDGVPL--SNELTSEPYFR---IQSTRREDAGVYHCVAT 115

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC--KASGLPEPEIHWVHNGKP 165
           N VG   S  I  +V     F    E I + +  +            P P++ W  +   
Sbjct: 116 NDVGSIFSERITFAVAYMGVFEDLTERIVSVKSGSAAVLTLPPIESHPAPDVTWFASDGS 175

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS-LG----------YVYKDVYVNV 214
           +       +     + + I N  +SD G Y   A N+ LG           V  D   +V
Sbjct: 176 LLYG---IKYASVHHTLLILNASESDQGLYRARAINTQLGKEENSPFFKLQVTGDANADV 232

Query: 215 LAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVN--WIHNQKELTGGR--YTILET 269
              AP I   P+D   + D     + C        E+   W  +   +   R  Y+  ++
Sbjct: 233 ---APAIIVKPQDTQIIKDQDVTYIHCIANARSLHELRTLWTKDGIPIENSRISYSFNDS 289

Query: 270 GD--LKITDVAFADSGEYTCFARNKLG---TAQGSGSLTVKEH-THITDQPEDYEVEAGQ 323
            +  L +       +G Y+C    + G   T   S  + V E    IT+   +   + G 
Sbjct: 290 WNRTLALMSANITYTGVYSCHVDLRSGGYPTVNASAKVVVYEKPAFITELKRETLSDYGS 349

Query: 324 SATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           + T  C+AV  P   +S  W R +EP+D     R+    D SLT+ K +  DSG + C A
Sbjct: 350 TVTLPCDAVGVPPPNIS--WFRNAEPVDHLLGSRYAMEEDGSLTIKKLTMDDSGMFQCLA 407

Query: 384 QTEL----DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVS 427
             E+     +   +A  +  +    P N T   ++D K A +S N V+
Sbjct: 408 ANEVGEASSYTWLKAKTSGPIMENGPQNLT---ILDGKDATLSCNAVA 452



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 111/275 (40%), Gaps = 21/275 (7%)

Query: 123 LAAPYFTVEPEFIN--AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN 180
           L  P FT +P       +E  T   +C+A G P+P+  W  +G P+S             
Sbjct: 42  LQEPRFTTQPSSSGNILSENRTKFLQCQARGYPQPKYKWFKDGVPLSN------ELTSEP 95

Query: 181 RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLT 239
              I++ R+ D G Y C ATN +G ++ +     +A+     +  +   +V  G   VLT
Sbjct: 96  YFRIQSTRREDAGVYHCVATNDVGSIFSERITFAVAYMGVFEDLTERIVSVKSGSAAVLT 155

Query: 240 C-RVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQ 297
              +   P P+V W  +   L  G         L I + + +D G Y   A N +LG  +
Sbjct: 156 LPPIESHPAPDVTWFASDGSLLYGIKYASVHHTLLILNASESDQGLYRARAINTQLGKEE 215

Query: 298 GS--------GSLTVKEHTHITDQPEDYEVEAGQSATF-RCNAVSDPSLKLSIVWLRGSE 348
            S        G         I  +P+D ++   Q  T+  C A +    +L  +W +   
Sbjct: 216 NSPFFKLQVTGDANADVAPAIIVKPQDTQIIKDQDVTYIHCIANARSLHELRTLWTKDGI 275

Query: 349 PIDFES-EPRFVQSNDYSLTVTKSSELDSGQYTCR 382
           PI+       F  S + +L +  ++   +G Y+C 
Sbjct: 276 PIENSRISYSFNDSWNRTLALMSANITYTGVYSCH 310



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 84/202 (41%), Gaps = 24/202 (11%)

Query: 403  EAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGES 462
            EAP      + +++    V W P +PQ + G  +GYK+Q W   +   +      N+ +S
Sbjct: 825  EAPPTNVRAKAVNSTAIKVWWKPPNPQKINGINQGYKLQAWIGSNFTEA------NEYKS 878

Query: 463  TTTEVDKFVPASKNFA-------------RVLAFNGAYNGPPSEIISFVTPEGVPGTVQS 509
             +     F P ++  A              VL F    +G  S  +   T E VP  V++
Sbjct: 879  MSVPPSLFDPLAEQSAIMTGLRKYTLYNITVLCFTDPGDGERSSPVQIRTLEDVPEQVEN 938

Query: 510  LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKL 569
            L+   +   A  +KW  P++ NG+L  Y++KY  +K       +E            AK+
Sbjct: 939  LQFEDISDRALTVKWKPPKEINGILTLYQLKYM-IKDIPDSLRVENF----TANDLLAKI 993

Query: 570  AGLEPSTKYRIHLAGYTKAGDG 591
              L+  T Y+  +  +T  G G
Sbjct: 994  EHLQAMTHYKFEVVAWTSIGPG 1015



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 16/157 (10%)

Query: 480  VLAFNGAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWVKPE--QPNGVLMG 536
            VL FN    GP S  ++    E VP G  Q L+A P+ S+   L+W  P+    NG L+G
Sbjct: 1612 VLPFNSEGEGPSSPPVTVYVGEAVPTGEPQHLKAEPISSTEVQLRWKPPQANMQNGDLLG 1671

Query: 537  YKIKYQSVKG-----TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            YKI Y           K    +E +P     +  +  L  L+  T+YRI +  +  AGDG
Sbjct: 1672 YKIFYLVTDSPQELENKQEEEIEVVP----ASYLTHSLVFLDKYTEYRIQVLAFNPAGDG 1727

Query: 592  AESKYLFYVPFKN----PDNVEGRGSTPNNLVISWTA 624
              +  +     ++    P N++    T  +L +SW A
Sbjct: 1728 PRTPPITVRTKEDIPGPPYNLQFTEITMTSLRVSWEA 1764



 Score = 44.7 bits (104), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 4/136 (2%)

Query: 414  IDAKKAVVSWNPVSPQSLRGHFRGYKV---QTWTEKDGEGSIRELIVNKGESTTTEVDKF 470
            I + +  + W P       G   GYK+    T + ++ E    E I     S  T    F
Sbjct: 1648 ISSTEVQLRWKPPQANMQNGDLLGYKIFYLVTDSPQELENKQEEEIEVVPASYLTHSLVF 1707

Query: 471  VPASKNF-ARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQ 529
            +     +  +VLAFN A +GP +  I+  T E +PG   +L+   +  ++  + W  P+ 
Sbjct: 1708 LDKYTEYRIQVLAFNPAGDGPRTPPITVRTKEDIPGPPYNLQFTEITMTSLRVSWEAPKL 1767

Query: 530  PNGVLMGYKIKYQSVK 545
             NG ++GY + Y++ +
Sbjct: 1768 RNGQIVGYIVTYETAE 1783



 Score = 40.8 bits (94), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 26/182 (14%)

Query: 420  VVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTT-EVDKFVPASKNFA 478
            +V W  V  +   G   G+KV   +        + +  N   +TT  E+ KFV   +   
Sbjct: 1248 LVRWGDVPIEHQNGQIEGFKVYYGSNARSAFQYKNIPSNTTFTTTLTELRKFV---QYHV 1304

Query: 479  RVLAF----NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
            +VLA+    +G  + PP  + +F   E  PG   ++    +  +   + W  PE PNG +
Sbjct: 1305 QVLAYTRLGDGTLSTPPVRVQTF---EDAPGPPSNVSFPDVSFTTARIIWDTPEDPNGEI 1361

Query: 535  MGYKIKY-----QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
            + YK+ +     Q  + +K  P  +R          + +  GLEP   Y   +   T+ G
Sbjct: 1362 LAYKVMFHLNNSQDHQFSKEFPASDR----------TFRATGLEPEKYYMFSVTAQTRLG 1411

Query: 590  DG 591
             G
Sbjct: 1412 WG 1413


>gi|426339220|ref|XP_004033556.1| PREDICTED: contactin-6 isoform 2 [Gorilla gorilla gorilla]
          Length = 956

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 180/715 (25%), Positives = 302/715 (42%), Gaps = 76/715 (10%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    + S+      L I + +  D+G Y 
Sbjct: 167 AAKDSSVKLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQ--AILEIPNFQQEDEGFYE 224

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C  SN  G   +    L   A P +  + +    +  + + +ECKASG P P   W+ NG
Sbjct: 225 CIASNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDNLLWECKASGKPNPWYTWLKNG 283

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++   P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 284 ERLN---PEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSK 340

Query: 224 AP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
           +P  K  +   G  +V+ C+    P+  ++W    + L    R  +LE G LKI ++  +
Sbjct: 341 SPVKKKSFVQVGGDIVIGCKPNAFPRAAISWKRGTETLRQSKRIFLLEDGSLKIYNITRS 400

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ GTA+ +GSL VKE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 401 DAGSYTCIATNQFGTAKNTGSLIVKERTVITVPPSKMDVTVGESIVLPCQVSHDPSIEVV 460

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            VW    + ID +       R    +   L +       SG+Y C  QT L+ + A A +
Sbjct: 461 FVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADI 520

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW    P +     + + +QT T          ++
Sbjct: 521 IVRGPPGPPEDVQ-VEDISSTTSQLSWR-AGPDN-NSPIQIFTIQTRTPFSVGWQAVATV 577

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA 512
            E++   G++    V    P  +   RV+A N    G PS+    +  +     V  +  
Sbjct: 578 PEIL--NGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVNI 635

Query: 513 IPLGS--SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
              G   S   + W  +  E  NG   GY I ++ V  T      E++  + + +    +
Sbjct: 636 HGGGGSRSELVITWESIPEELQNGDGFGYIIMFRPVGSTTWSK--EKVSSV-ESSRFVYR 692

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS-----TPNNLVISWT 623
              + P + + + +  Y   G+G+ S        ++   +  RG+     + + + +SW 
Sbjct: 693 NESIIPLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSLQSFSASEMEVSWN 752

Query: 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWT 683
           A+                       AWN       R +  VL        YE   V  WT
Sbjct: 753 AI-----------------------AWN-------RNTGRVLG-------YE---VLYWT 772

Query: 684 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           +   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S  ++  T
Sbjct: 773 DDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGTGPSSPPVNVTT 826



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 163/660 (24%), Positives = 258/660 (39%), Gaps = 87/660 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC ++N   EA+      SV   P   V+                
Sbjct: 108 NLYIAKVEPSDVGNYTCFITNK--EAQR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 160

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ +V  EC A G P P+I W   +G P+   P   +       + I N ++
Sbjct: 161 FPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPL---PGKVKYSKSQAILEIPNFQQ 217

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A+N  G       + +    PE  +  ++ Y      ++  C+  G P P 
Sbjct: 218 EDEGFYECIASNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDNLLWECKASGKPNPW 276

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L       +E G L IT +  +DSG Y C A NK      +  L V     
Sbjct: 277 YTWLKNGERLNPEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAP 336

Query: 309 HITDQPEDYE--VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P   +  V+ G      C   + P  + +I W RG+E +      R     D SL
Sbjct: 337 DFSKSPVKKKSFVQVGGDIVIGCKPNAFP--RAAISWKRGTETL--RQSKRIFLLEDGSL 392

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV------ 420
            +   +  D+G YTC A  +    +   +L V+         T+I V  +K  V      
Sbjct: 393 KIYNITRSDAGSYTCIATNQFGTAKNTGSLIVK-------ERTVITVPPSKMDVTVGESI 445

Query: 421 -----VSWNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKF 470
                VS +P         F G  +         E+ G  S+ +L++   +       K+
Sbjct: 446 VLPCQVSHDPSIEVVFVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQ--LHHSGKY 503

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
           +   +     L+            ++ +   G PG  + ++   + S+   L W      
Sbjct: 504 LCTVQTTLESLS-----------AVADIIVRGPPGPPEDVQVEDISSTTSQLSWRAGPDN 552

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           N  +  + I  Q+     VG   +  +P I +  T +A + GL P  +Y   +      G
Sbjct: 553 NSPIQIFTI--QTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIG 610

Query: 590 DGAESK------YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  SK          VP   P N+ G G + + LVI+W ++PE   N   F Y I +R 
Sbjct: 611 IGEPSKPSELLRTKASVPVVAPVNIHGGGGSRSELVITWESIPEELQNGDGFGYIIMFRP 670

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
             +   W+++ V     S  V  N+      P+E+KV       +GEGS+  + IV  GE
Sbjct: 671 VGS-TTWSKEKVSSVESSRFVYRNESIIPLSPFEVKV--GVYNNEGEGSLSTVTIVYSGE 727



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 167/720 (23%), Positives = 282/720 (39%), Gaps = 97/720 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +NP +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 267 CKASGKPNPWYTWLKNGERLNPEERIQIEN--GTLIITMLNVSDSGVYQCAAENKY-QII 323

Query: 115 SYSIDLSVLA-APYFTVEP----EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
             + +L VLA AP F+  P     F+    +  +   CK +  P   I W    + + Q+
Sbjct: 324 YANAELRVLASAPDFSKSPVKKKSFVQVGGD--IVIGCKPNAFPRAAISWKRGTETLRQS 381

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
                 + G   + I N+ +SD G+Y C ATN  G   K+    ++     IT  P    
Sbjct: 382 KRIFLLEDG--SLKIYNITRSDAGSYTCIATNQFGTA-KNTGSLIVKERTVITVPPSKMD 438

Query: 230 TVDGKTVVLTCRVFGAPKPEVN--WIHN-----------QKELTGGRYTILETGDLKITD 276
              G+++VL C+V   P  EV   W  N             E  GG       GDL I +
Sbjct: 439 VTVGESIVLPCQVSHDPSIEVVFVWFFNGDVIDLKKGVAHFERIGGE----SVGDLMIRN 494

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSD 334
           +    SG+Y C  +  L +      + V+        PED +VE   S T + +  A  D
Sbjct: 495 IQLHHSGKYLCTVQTTLESLSAVADIIVRGPP---GPPEDVQVEDISSTTSQLSWRAGPD 551

Query: 335 PSLKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            +  + I  ++   P         + P  +    Y+ TV   S     ++   A   +  
Sbjct: 552 NNSPIQIFTIQTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGI 611

Query: 390 IEAQA-----TLTVQVPLEAPSNFTLIQVIDAKKA--VVSWNPVSPQSLRGHFRGYKVQ- 441
            E             VP+ AP N   I      ++  V++W  +  +   G   GY +  
Sbjct: 612 GEPSKPSELLRTKASVPVVAPVN---IHGGGGSRSELVITWESIPEELQNGDGFGYIIMF 668

Query: 442 ------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
                 TW+++          V + ES        +P S    +V  +N    G  S + 
Sbjct: 669 RPVGSTTWSKEKVSSVESSRFVYRNES-------IIPLSPFEVKVGVYNNEGEGSLSTVT 721

Query: 496 SFVTPEGVP-----GT-VQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGT 547
              + E  P     GT +QS  A  +  S   + W    +  G ++GY++ Y     K +
Sbjct: 722 IVYSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDSKES 778

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PF 602
            +G +      +S   TT   + GL+ +T Y   +  Y  AG G  S  +        P 
Sbjct: 779 MIGKI-----RVSGNVTTK-NITGLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPS 832

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQS- 661
           + P N+  +  T + L ++W  +  +E+ +    Y+I +R++      ++  +L+   + 
Sbjct: 833 QPPANIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQNRQ----SKTHILETNNTS 887

Query: 662 -ELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 720
            EL++   P  + Y I++       DG  S  E+ + K  S ++   +F+  S +F  ++
Sbjct: 888 AELLV---PFEEDYLIEIRTVSDGGDGSSS-EEIRIPKMSSLSSRGIQFLEPSTHFLSIV 943



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 81/214 (37%), Gaps = 29/214 (13%)

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPE 249
           D G Y C ATN LG +         A+  +     +   +V +G+ VVL C     P P 
Sbjct: 22  DIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLC----GPPPH 77

Query: 250 VN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCFARNKLG--TAQG 298
                  W  N   L       R+   ETG+L I  V  +D G YTCF  NK    + QG
Sbjct: 78  FGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQG 137

Query: 299 SGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEP 349
             +  V+    +  +         PE  +     S    C A+ +P   +S   L GS  
Sbjct: 138 PPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSP- 196

Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
                + ++ +S    L +    + D G Y C A
Sbjct: 197 --LPGKVKYSKSQAI-LEIPNFQQEDEGFYECIA 227


>gi|403269328|ref|XP_003926701.1| PREDICTED: contactin-1 isoform 1 [Saimiri boliviensis boliviensis]
          Length = 1018

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 170/645 (26%), Positives = 271/645 (42%), Gaps = 48/645 (7%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 241 PADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 298

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 299 NIQLEDEGIYECEAENIRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 354

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 355 TGKPIPTIRWLKNGYAYHKG------ELRLYDVTFEN-----AGMYQCIAENTHGAIYAN 403

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 404 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 463

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 464 WEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENAT 523

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ VW      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 524 MQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLRHAGRYTC 583

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            AQT +D   A A L V+ P   P     I+ I A    ++W+  S          Y +Q
Sbjct: 584 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYTIQ 640

Query: 442 TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           T T    D + +  +  + +G          +P  +   RV+A N    G PS   + + 
Sbjct: 641 TKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNKIK 700

Query: 500 PEGVPGTVQSLEAIPLG--SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
            +G    V   +    G  +    + W  +  E   G   GY + ++   G +   +   
Sbjct: 701 TDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVT 760

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEG 610
            P   D      K   + PST +++ +  +   GDG  S           P + P  V  
Sbjct: 761 NP---DTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGV 817

Query: 611 RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDV 655
           +  + + + + W  +  +E     ++ R +W  H+  EA N+  V
Sbjct: 818 KVLSSSEISVHWEHV--LEKIVESYQIR-YWAAHDREEAANRVQV 859



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 155/657 (23%), Positives = 246/657 (37%), Gaps = 85/657 (12%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 189 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVV 246

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  I A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 247 QFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 303

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N  G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 304 DEGIYECEAENIRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 362

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 363 RWLKN-----GYAY---HKGELRLYDVTFENAGMYQCIAENTHGAIYANAELKILALAPT 414

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   D SL 
Sbjct: 415 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 470

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC A+       +  TL +  P   + AP N  +    +A  +   S+
Sbjct: 471 INNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASF 530

Query: 424 NPVSPQSLRGHFRGYKV-----------QTWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
           +P    +    F GY +               + +GE  IR   +      T      V 
Sbjct: 531 DPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLRHAGRYTCTAQTIVD 590

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
            S   A ++                    G PG    L    + +++  L W +    + 
Sbjct: 591 NSSASADLVV------------------RGPPGPPGGLRIEDIRATSVALTWSRGSDNHS 632

Query: 533 VLMGYKIKYQSV-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
            +  Y I+ +++     K  K  P     P I +    +A+   L P  +Y   +     
Sbjct: 633 PISKYTIQTKTILSDDWKDAKTDP-----PII-EGNMEAARAVDLIPWMEYEFRVVATNT 686

Query: 588 AGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            G G  S      K     P   P +V G G     L I+W  +    H   +F Y + +
Sbjct: 687 LGRGEPSIPSNKIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAF 746

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
           +  + GE W +  V +      V  ++ T  P   +++KV     + DG  S+  +I
Sbjct: 747 KPFD-GEEWKKVTVTNPDTGRYVHKDE-TMSPSTAFQVKVKAFNNKGDGPYSLVAVI 801



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 140/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   ++  SDR S    G +L+I + +   D G Y C  S
Sbjct: 60  KVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 117

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 118 NSYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 171

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 172 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 228

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 229 LIPIPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 288

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 289 STSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 348

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+       + E R      Y +T       ++G Y C A+ 
Sbjct: 349 YWPCVATGKPI--PTIRWLKNGYAY-HKGELRL-----YDVTFE-----NAGMYQCIAEN 395

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 396 THGAIYANAELKI 408



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   +     +    VG N +   
Sbjct: 47  PINTIYPE---ESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTS-DRYSMVGGNLVINN 102

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+NS G V          +        + E  V +GK +VL C   +
Sbjct: 103 PDKQKDAGIYYCLASNSYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 162

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 163 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 222

Query: 299 SGSLT----VKEHT------HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                    + E T       I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 223 FSKFIPLIPIPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPV--PDIRWRKVLE 280

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 281 PMPSTAE---ISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 328



 Score = 40.4 bits (93), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+    ++V+ + +  V W  V    L      Y+++ W   D E +   + V   
Sbjct: 808 PSEAPTEVG-VKVLSSSEISVHWEHV----LEKIVESYQIRYWAAHDREEAANRVQVTSQ 862

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GPPS+ I   T +  P     + +     S +
Sbjct: 863 E-YSARLENLLPDTQYFIEVGACNSAGCGPPSDRIEAFTKKAPPSQPPRIISSVRSGSRY 921

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYK+ Y+
Sbjct: 922 IITWDHVVALSNESTVTGYKVLYR 945


>gi|403269330|ref|XP_003926702.1| PREDICTED: contactin-1 isoform 2 [Saimiri boliviensis boliviensis]
          Length = 1007

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 170/647 (26%), Positives = 274/647 (42%), Gaps = 52/647 (8%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 230 PADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 287

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 288 NIQLEDEGIYECEAENIRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 343

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 344 TGKPIPTIRWLKNGYAYHKG------ELRLYDVTFEN-----AGMYQCIAENTHGAIYAN 392

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 393 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 452

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 453 WEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENAT 512

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ VW      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 513 MQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLRHAGRYTC 572

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            AQT +D   A A L V+ P   P     I+ I A    ++W+  S          Y +Q
Sbjct: 573 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYTIQ 629

Query: 442 TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           T T    D + +  +  + +G          +P  +   RV+A N    G PS   + + 
Sbjct: 630 TKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNKIK 689

Query: 500 PEGVPGTVQSLEAIPLG--SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
            +G    V   +    G  +    + W  +  E   G   GY + ++   G +   +   
Sbjct: 690 TDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT-- 747

Query: 556 LPYISDPTTTS--AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNV 608
              +++P T     K   + PST +++ +  +   GDG  S           P + P  V
Sbjct: 748 ---VTNPDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEV 804

Query: 609 EGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDV 655
             +  + + + + W  +  +E     ++ R +W  H+  EA N+  V
Sbjct: 805 GVKVLSSSEISVHWEHV--LEKIVESYQIR-YWAAHDREEAANRVQV 848



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 155/657 (23%), Positives = 246/657 (37%), Gaps = 85/657 (12%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 178 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVV 235

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  I A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 236 QFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 292

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N  G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 293 DEGIYECEAENIRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 351

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 352 RWLKN-----GYAY---HKGELRLYDVTFENAGMYQCIAENTHGAIYANAELKILALAPT 403

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   D SL 
Sbjct: 404 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 459

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC A+       +  TL +  P   + AP N  +    +A  +   S+
Sbjct: 460 INNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASF 519

Query: 424 NPVSPQSLRGHFRGYKV-----------QTWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
           +P    +    F GY +               + +GE  IR   +      T      V 
Sbjct: 520 DPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLRHAGRYTCTAQTIVD 579

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
            S   A ++                    G PG    L    + +++  L W +    + 
Sbjct: 580 NSSASADLVV------------------RGPPGPPGGLRIEDIRATSVALTWSRGSDNHS 621

Query: 533 VLMGYKIKYQSV-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
            +  Y I+ +++     K  K  P     P I +    +A+   L P  +Y   +     
Sbjct: 622 PISKYTIQTKTILSDDWKDAKTDP-----PII-EGNMEAARAVDLIPWMEYEFRVVATNT 675

Query: 588 AGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            G G  S      K     P   P +V G G     L I+W  +    H   +F Y + +
Sbjct: 676 LGRGEPSIPSNKIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAF 735

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
           +  + GE W +  V +      V  ++ T  P   +++KV     + DG  S+  +I
Sbjct: 736 KPFD-GEEWKKVTVTNPDTGRYVHKDE-TMSPSTAFQVKVKAFNNKGDGPYSLVAVI 790



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 140/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   ++  SDR S    G +L+I + +   D G Y C  S
Sbjct: 49  KVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 106

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 107 NSYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 160

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 161 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 217

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 218 LIPIPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 277

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 278 STSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 337

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+       + E R      Y +T       ++G Y C A+ 
Sbjct: 338 YWPCVATGKPI--PTIRWLKNGYAY-HKGELRL-----YDVTFE-----NAGMYQCIAEN 384

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 385 THGAIYANAELKI 397



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   +     +    VG N +   
Sbjct: 36  PINTIYPE---ESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTS-DRYSMVGGNLVINN 91

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+NS G V          +        + E  V +GK +VL C   +
Sbjct: 92  PDKQKDAGIYYCLASNSYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 151

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 152 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 211

Query: 299 SGSLT----VKEHT------HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                    + E T       I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 212 FSKFIPLIPIPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPV--PDIRWRKVLE 269

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 270 PMPSTAE---ISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 317



 Score = 40.4 bits (93), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+    ++V+ + +  V W  V    L      Y+++ W   D E +   + V   
Sbjct: 797 PSEAPTEVG-VKVLSSSEISVHWEHV----LEKIVESYQIRYWAAHDREEAANRVQVTSQ 851

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GPPS+ I   T +  P     + +     S +
Sbjct: 852 E-YSARLENLLPDTQYFIEVGACNSAGCGPPSDRIEAFTKKAPPSQPPRIISSVRSGSRY 910

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYK+ Y+
Sbjct: 911 IITWDHVVALSNESTVTGYKVLYR 934


>gi|348510469|ref|XP_003442768.1| PREDICTED: contactin-4-like [Oreochromis niloticus]
          Length = 1012

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 164/626 (26%), Positives = 254/626 (40%), Gaps = 52/626 (8%)

Query: 47  RNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           +   V+L C   G P+P   W + DG P+    +I   +    L I +    D G Y C 
Sbjct: 240 KGSSVKLECFALGNPVPSISWRRADGNPL--PGKIKINHSSGVLEIPYFRPEDAGMYECV 297

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINA--AEEETVTFECKASGLPEPEIHWVHNG 163
             N  G   +    L   +A +        +A  A +  + +ECKA G P P   W+ NG
Sbjct: 298 AENSRGRNVARG-QLIFHSAEHLQWVQTLKDAHMAIDANLQWECKAIGKPRPTYRWLKNG 356

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + +       R  +   R+TI  +  SD+G Y C A N  G VY    + V+A  P+ T 
Sbjct: 357 QSLKA---EERIHLEAGRLTIPKISLSDSGMYQCVAENEHGSVYASAELKVVASPPDFTR 413

Query: 224 APKDEYTV--DGKTVVLTCRVFGAPKPEVNW-----IHNQKELTGGRYTILETGDLKITD 276
            P  + TV   G  VVL CR   +P+  ++W     +H +      R TI+E G L+IT+
Sbjct: 414 RPVKKSTVIQRGGEVVLECRPHASPRATISWWREGGMHLKDS---ERRTIMEDGTLRITN 470

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
           ++ +D G YTC ARN+ GT+  +GSL VKE T I   P   +   GQS    C   SD S
Sbjct: 471 ISKSDGGRYTCVARNRFGTSSSTGSLVVKEPTKIIVPPLSLDASVGQSIVLPCEVSSDSS 530

Query: 337 LKLSIVWLRGSEPIDFESEPRF-VQSNDYS--LTVTKSSELDSGQYTCRAQTELDFIEAQ 393
           L     W    + IDF  +  F +    ++  L V       SG+Y C   TE+D + A 
Sbjct: 531 LSPIFKWFFNGKAIDFNRQEHFEMIGGGFAGDLMVRNIQLKHSGKYVCMVHTEVDTVSAA 590

Query: 394 ATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE-KDGEGSI 452
           A L V+ P   P    +  + D     +SW   S          Y VQ  T    G  ++
Sbjct: 591 ADLIVRGPPGPPEGLVVTDITDT-TVQLSWG--SGPDNHSPVTKYMVQARTPFSIGWQTV 647

Query: 453 RELIVN-KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLE 511
           R +  +  G+     V +  P      RV+A N    G PS     +  +     V  + 
Sbjct: 648 RTVPDSVPGQMMHATVKELNPWVDYEFRVVAINSVGVGEPSTPSKQIRTKAAVPKVAPIN 707

Query: 512 AIPLGSS--AFYLKW--VKPEQPNGVLMGYKIKYQS------VKGTKVGPLLERLPYISD 561
               G +     + W  V  EQ +G   GY + ++       ++     P   R  Y +D
Sbjct: 708 VSGGGGARGELVIMWEPVPEEQQSGEDFGYVVAFRPLGSSTWIQTVLASPDASRYIYRND 767

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPN 616
                     + P + + + +  Y   G+G  S+ +        P + P     R  + +
Sbjct: 768 ---------SIAPLSLFEVTVGVYNNMGEGPFSRVVRVFSAEEEPSEAPSRAWARAVSAS 818

Query: 617 NLVISWTAMPEIEHNAPHFKYRI-FW 641
            + + W  +P   ++     Y + FW
Sbjct: 819 EIEVFWEPVPPRSNSEKIVAYEVLFW 844



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 146/595 (24%), Positives = 223/595 (37%), Gaps = 71/595 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V N +  +  +S    V+           P   V+ P+ ++ 
Sbjct: 179 NLYIAKVEASDAGNYTCAVRNMMTNSTVFSSPTPVVVRRDVVMGEYEPKIEVQFPDTLHV 238

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           ++  +V  EC A G P P I W   +G P+   P   +       + I   R  D G Y 
Sbjct: 239 SKGSSVKLECFALGNPVPSISWRRADGNPL---PGKIKINHSSGVLEIPYFRPEDAGMYE 295

Query: 197 CNATNSLGY-VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
           C A NS G  V +   +   A   +  +  KD +      +   C+  G P+P   W+ N
Sbjct: 296 CVAENSRGRNVARGQLIFHSAEHLQWVQTLKDAHMAIDANLQWECKAIGKPRPTYRWLKN 355

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
            + L       LE G L I  ++ +DSG Y C A N+ G+   S  L  V      T +P
Sbjct: 356 GQSLKAEERIHLEAGRLTIPKISLSDSGMYQCVAENEHGSVYASAELKVVASPPDFTRRP 415

Query: 315 --EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
             +   ++ G      C   + P  + +I W R       +SE R +   D +L +T  S
Sbjct: 416 VKKSTVIQRGGEVVLECRPHASP--RATISWWREGGMHLKDSERRTIM-EDGTLRITNIS 472

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVP---------LEAPSNFTLIQVIDAKKAVVSW 423
           + D G+YTC A+       +  +L V+ P         L+A    +++   +      S 
Sbjct: 473 KSDGGRYTCVARNRFGTSSSTGSLVVKEPTKIIVPPLSLDASVGQSIVLPCEVSSDS-SL 531

Query: 424 NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGE---------STTTEVDKFVPAS 474
           +P+      G    +  Q   E  G G   +L+V   +            TEVD    A+
Sbjct: 532 SPIFKWFFNGKAIDFNRQEHFEMIGGGFAGDLMVRNIQLKHSGKYVCMVHTEVDTVSAAA 591

Query: 475 KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPEQPNGV 533
               R         GPP      V  +    TVQ S  + P   S      V+   P   
Sbjct: 592 DLIVR---------GPPGPPEGLVVTDITDTTVQLSWGSGPDNHSPVTKYMVQARTP--- 639

Query: 534 LMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
              + I +Q+V+          +P         A +  L P   Y   +      G G  
Sbjct: 640 ---FSIGWQTVR---------TVPDSVPGQMMHATVKELNPWVDYEFRVVAINSVGVGEP 687

Query: 594 S------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           S      +    VP   P NV G G     LVI W  +PE + +   F Y + +R
Sbjct: 688 STPSKQIRTKAAVPKVAPINVSGGGGARGELVIMWEPVPEEQQSGEDFGYVVAFR 742



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 167/705 (23%), Positives = 265/705 (37%), Gaps = 83/705 (11%)

Query: 36  QYVTRKKEVALR-NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV 94
           Q+V   K+  +  +  ++  C   G P P   W K+G  +   +RI        L I  +
Sbjct: 320 QWVQTLKDAHMAIDANLQWECKAIGKPRPTYRWLKNGQSLKAEERIHL--EAGRLTIPKI 377

Query: 95  EFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAP-YFTVEP----EFINAAEEETVTFECKA 149
             SD G Y C   N  G   + S +L V+A+P  FT  P      I    E  V  EC+ 
Sbjct: 378 SLSDSGMYQCVAENEHGSVYA-SAELKVVASPPDFTRRPVKKSTVIQRGGE--VVLECRP 434

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKV---GPNRITIENLRKSDTGNYGCNATNSLGYV 206
              P   I W   G        + RR +   G  RIT  N+ KSD G Y C A N  G  
Sbjct: 435 HASPRATISWWREGG--MHLKDSERRTIMEDGTLRIT--NISKSDGGRYTCVARNRFGTS 490

Query: 207 YKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRY 264
                + V+    +I   P       G+++VL C V    +  P   W  N K +   R 
Sbjct: 491 SSTGSL-VVKEPTKIIVPPLSLDASVGQSIVLPCEVSSDSSLSPIFKWFFNGKAIDFNRQ 549

Query: 265 TILE------TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYE 318
              E       GDL + ++    SG+Y C    ++ T   +  L V+        PE   
Sbjct: 550 EHFEMIGGGFAGDLMVRNIQLKHSGKYVCMVHTEVDTVSAAADLIVRGPP---GPPEGLV 606

Query: 319 VEAGQSATFRCNAVSDPS----LKLSIVWLRGSEPIDFESE---PRFVQSNDYSLTVTKS 371
           V      T + +  S P     +   +V  R    I +++    P  V       TV + 
Sbjct: 607 VTDITDTTVQLSWGSGPDNHSPVTKYMVQARTPFSIGWQTVRTVPDSVPGQMMHATVKEL 666

Query: 372 SELDSGQYTCRAQTELDFIE-----AQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPV 426
           +     ++   A   +   E      Q      VP  AP N +       +  V+ W PV
Sbjct: 667 NPWVDYEFRVVAINSVGVGEPSTPSKQIRTKAAVPKVAPINVSGGGGARGE-LVIMWEPV 725

Query: 427 SPQSLRGHFRGYKV-------QTWTEKDGEGSIRELIVNKGESTTT-EVDKFVPASKNFA 478
             +   G   GY V        TW        I+ ++ +   S      D   P S    
Sbjct: 726 PEEQQSGEDFGYVVAFRPLGSSTW--------IQTVLASPDASRYIYRNDSIAPLSLFEV 777

Query: 479 RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLE-AIPLGSSAFYLKW--VKPEQPNGVLM 535
            V  +N    GP S ++   + E  P    S   A  + +S   + W  V P   +  ++
Sbjct: 778 TVGVYNNMGEGPFSRVVRVFSAEEEPSEAPSRAWARAVSASEIEVFWEPVPPRSNSEKIV 837

Query: 536 GYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK 595
            Y++ +   +G       +R+  I+     +A L+GL+ ST+Y I +     AG G  S 
Sbjct: 838 AYEVLFW--EGGLEQSEADRVRVIN----CTALLSGLKGSTRYLISVRAQNSAGLGPCSP 891

Query: 596 YLFYVPFKNPDNVEGRGSTPNNLV-----ISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
             F +  K P   +  GS   NL      ++W  +  +E+ +    Y++ +R++     W
Sbjct: 892 -PFNITTKKPPPSQPPGSIEWNLTNSKIFLNWEHVKAMENESEVTGYKVVYRQN-----W 945

Query: 651 -NQDDVLDWRQSELVLANQPTFQPY--EIKVVQTWTEKDGEGSIR 692
            ++  VL+  ++ L L   P+ + Y  EIK +    +    G IR
Sbjct: 946 HDRTTVLETNKTSLEL-QIPSGEDYLIEIKALTEGGDGTSSGPIR 989



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 115/287 (40%), Gaps = 38/287 (13%)

Query: 125 APYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P FT EP    F  + +++ V   CKA G P P   W  +G+ I+    +P   +    
Sbjct: 24  GPVFTQEPSDSIFPMSTDDKQVFINCKAKGNPPPRYRWKVDGRDIN-TDSDPNYSLVEGN 82

Query: 182 ITIENLRKSDTGN-YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLT 239
           + I N    + G  Y C ATN+ G V         A     +   ++  +V +G+ VVL 
Sbjct: 83  LLISNPHVINHGGVYQCIATNTFGTVVSREAKVQFAFLQNFSSKTRNTVSVREGQAVVLL 142

Query: 240 CRVFGAPKP-----EVNWIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCFAR 290
           C     P P     + +W+ N +    +    R+   +TG+L I  V  +D+G YTC  R
Sbjct: 143 C----GPPPHYGEIKYSWVFNGQRNFLQQDARRFISQKTGNLYIAKVEASDAGNYTCAVR 198

Query: 291 NKL--GTAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSLKL 339
           N +   T   S +  V     +  +         P+   V  G S    C A+ +P    
Sbjct: 199 NMMTNSTVFSSPTPVVVRRDVVMGEYEPKIEVQFPDTLHVSKGSSVKLECFALGNPV--P 256

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYS--LTVTKSSELDSGQYTCRAQ 384
           SI W R     D    P  ++ N  S  L +      D+G Y C A+
Sbjct: 257 SISWRRA----DGNPLPGKIKINHSSGVLEIPYFRPEDAGMYECVAE 299


>gi|296475001|tpg|DAA17116.1| TPA: contactin 6 [Bos taurus]
          Length = 1018

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 185/716 (25%), Positives = 309/716 (43%), Gaps = 78/716 (10%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    + S+      L I + +  D+G Y 
Sbjct: 229 AAKDSSVKLECFALGNPIPDISWRRLDGSPLPGKVKYSKSQ--AILEIPNFQQEDEGFYE 286

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C  SN  G   +    L   A P +  + +    +  +++ +ECKASG P+P   W+ NG
Sbjct: 287 CIASNLRGRNLAKG-QLIFYAPPEWEQKIQDTYLSIYDSLFWECKASGKPDPWYTWLKNG 345

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++    + R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 346 ERLNL---DERIQIENGTLIITMLNVSDSGIYQCAAENKYQIIYANAELRVLASAPDFSK 402

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
            P  +Y+V   G  +V+ C+    P+  ++W    + L    R  +LE G LKI +V  +
Sbjct: 403 NPLKKYSVVQVGGDIVIECKPNAFPRATISWKRGIESLRQSKRVFLLEDGSLKIYNVTRS 462

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A+ +GSL +KE T IT  P   +V  G+S    C    DPS+ + 
Sbjct: 463 DAGLYTCIATNQFGVAKNTGSLIIKERTVITVPPSTMDVTVGESIVLPCQVSRDPSVDVV 522

Query: 341 IVWLRGSEPIDF-ESEPRFVQSNDYSL--TVTKSSELD-SGQYTCRAQTELDFIEAQATL 396
            VW    + IDF +    F +    S+   + ++ +L+ SG+Y C  +T L+ + A   +
Sbjct: 523 FVWSFNGDVIDFKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSADGDI 582

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-----WTEKDGEGS 451
            V+ P   P +   ++ I +    +SW P S  +        + +T     W       +
Sbjct: 583 IVRGPPGPPEDVR-VKHISSTTCQLSWRPGSDNNSPIQIFSIQARTPFSVGW---QAVST 638

Query: 452 IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSL 510
           + E++   G++    V    P  +   RV+A N    G PS+    + T   VP    + 
Sbjct: 639 VPEIL--NGKTFNATVVGLNPWVEYEFRVVAGNSIGIGEPSKPSELLRTKSSVPAVAPTN 696

Query: 511 EAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSA 567
                GS S   + W  +  E  NG   GY +  + V  T      ER+P + + +    
Sbjct: 697 INGGGGSRSELIITWESIPEELQNGEDFGYIVMLRPVGSTTWTK--ERVPSV-ESSRFIY 753

Query: 568 KLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS-----TPNNLVISW 622
           +   + P + + I +  Y K G+G  S        ++   +  RG+     + + + +SW
Sbjct: 754 RNENIIPLSPFEIKVGVYNKEGEGPLSTASIIYSGEDEPQLAPRGTSVQSFSASEMEVSW 813

Query: 623 TAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTW 682
            A+                       AWN       R +  VL        YE   V  W
Sbjct: 814 NAI-----------------------AWN-------RNTGRVLG-------YE---VLYW 833

Query: 683 TEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           T+   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S  ++  T
Sbjct: 834 TDDSKESMIGKIRVS-GNITTKNITGLKANTVYFASVRAYNTAGTGPSSPPVNVTT 888



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 161/653 (24%), Positives = 253/653 (38%), Gaps = 73/653 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC ++N   EA+      SV   P   V+                
Sbjct: 170 NLYIAKVEPSDVGNYTCFITN--KEAQR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 222

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ +V  EC A G P P+I W   +G P+   P   +       + I N ++
Sbjct: 223 FPETIQAAKDSSVKLECFALGNPIPDISWRRLDGSPL---PGKVKYSKSQAILEIPNFQQ 279

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A+N  G       + +    PE  +  +D Y     ++   C+  G P P 
Sbjct: 280 EDEGFYECIASNLRGRNLAKGQL-IFYAPPEWEQKIQDTYLSIYDSLFWECKASGKPDPW 338

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L       +E G L IT +  +DSG Y C A NK      +  L V     
Sbjct: 339 YTWLKNGERLNLDERIQIENGTLIITMLNVSDSGIYQCAAENKYQIIYANAELRVLASAP 398

Query: 309 HITDQP-EDYE-VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P + Y  V+ G      C   + P  + +I W RG E        R     D SL
Sbjct: 399 DFSKNPLKKYSVVQVGGDIVIECKPNAFP--RATISWKRGIE--SLRQSKRVFLLEDGSL 454

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ--VPLEAPSNFTLIQVIDA--KKAVVS 422
            +   +  D+G YTC A  +    +   +L ++    +  P +   + V ++      VS
Sbjct: 455 KIYNVTRSDAGLYTCIATNQFGVAKNTGSLIIKERTVITVPPSTMDVTVGESIVLPCQVS 514

Query: 423 WNPVSPQSLRGHFRG-----YKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 477
            +P         F G      K     E+ G  S+ +L++   +       K++   K  
Sbjct: 515 RDPSVDVVFVWSFNGDVIDFKKGMAHFERIGGESVGDLMIRNIQ--LNHSGKYLCTVKTT 572

Query: 478 ARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
              L+ +G            +   G PG  + +    + S+   L W      N  +  +
Sbjct: 573 LESLSADGD-----------IIVRGPPGPPEDVRVKHISSTTCQLSWRPGSDNNSPIQIF 621

Query: 538 KIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK- 595
            I  Q+     VG   +  +P I +  T +A + GL P  +Y   +      G G  SK 
Sbjct: 622 SI--QARTPFSVGWQAVSTVPEILNGKTFNATVVGLNPWVEYEFRVVAGNSIGIGEPSKP 679

Query: 596 -----YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
                    VP   P N+ G G + + L+I+W ++PE   N   F Y +  R   +   W
Sbjct: 680 SELLRTKSSVPAVAPTNINGGGGSRSELIITWESIPEELQNGEDFGYIVMLRPVGS-TTW 738

Query: 651 NQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
            ++ V     S  +  N+      P+EIKV      K+GEG +    I+  GE
Sbjct: 739 TKERVPSVESSRFIYRNENIIPLSPFEIKV--GVYNKEGEGPLSTASIIYSGE 789



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 147/638 (23%), Positives = 245/638 (38%), Gaps = 79/638 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +N  +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 329 CKASGKPDPWYTWLKNGERLNLDERIQIEN--GTLIITMLNVSDSGIYQCAAENKY-QII 385

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
             + +L VLA AP F+  P  ++        +  ECK +  P   I W    + + Q+  
Sbjct: 386 YANAELRVLASAPDFSKNPLKKYSVVQVGGDIVIECKPNAFPRATISWKRGIESLRQSKR 445

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
               + G   + I N+ +SD G Y C ATN  G V K+    ++     IT  P      
Sbjct: 446 VFLLEDG--SLKIYNVTRSDAGLYTCIATNQFG-VAKNTGSLIIKERTVITVPPSTMDVT 502

Query: 232 DGKTVVLTCRVFGAPKPEVN--WIHN-----------QKELTGGRYTILETGDLKITDVA 278
            G+++VL C+V   P  +V   W  N             E  GG       GDL I ++ 
Sbjct: 503 VGESIVLPCQVSRDPSVDVVFVWSFNGDVIDFKKGMAHFERIGGE----SVGDLMIRNIQ 558

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSDPS 336
              SG+Y C  +  L +    G + V+        PED  V+   S T + +    SD +
Sbjct: 559 LNHSGKYLCTVKTTLESLSADGDIIVRGPP---GPPEDVRVKHISSTTCQLSWRPGSDNN 615

Query: 337 LKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
             + I  ++   P         + P  +    ++ TV   +     ++   A   +   E
Sbjct: 616 SPIQIFSIQARTPFSVGWQAVSTVPEILNGKTFNATVVGLNPWVEYEFRVVAGNSIGIGE 675

Query: 392 AQATLTV-----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ----- 441
                 +      VP  AP+N          + +++W  +  +   G   GY V      
Sbjct: 676 PSKPSELLRTKSSVPAVAPTNINGGGG-SRSELIITWESIPEELQNGEDFGYIVMLRPVG 734

Query: 442 --TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
             TWT++          + + E+        +P S    +V  +N    GP S      +
Sbjct: 735 STTWTKERVPSVESSRFIYRNEN-------IIPLSPFEIKVGVYNKEGEGPLSTASIIYS 787

Query: 500 PEGVP------GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKVGP 551
            E  P       +VQS  A  +  S   + W    +  G ++GY++ Y     K + +G 
Sbjct: 788 GEDEPQLAPRGTSVQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDSKESMIGK 844

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPD 606
           +      +S   TT   + GL+ +T Y   +  Y  AG G  S  +        P + P 
Sbjct: 845 I-----RVSGNITTK-NITGLKANTVYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPA 898

Query: 607 NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           N+  +  T + L ++W  +  +E+ +    Y+I +R++
Sbjct: 899 NIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQN 935



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 133/379 (35%), Gaps = 42/379 (11%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS-DQGSYTC 104
           L   ++ L C   G PLP   W  +G  I+ S        G SL I       D G+Y C
Sbjct: 31  LSKSEIILNCAANGYPLPHYRWKHNGADIDFSMSYHYRLDGGSLAISSPRTDQDIGTYQC 90

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPEI-----H 158
             +N +G   S    L       F T     ++  E + V   C     P P        
Sbjct: 91  LATNSLGTILSQKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCG----PPPHFGDLSYA 146

Query: 159 WVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------- 205
           W  N  P+     N RR V      + I  +  SD GNY C  TN               
Sbjct: 147 WTFNDNPLYVQEDN-RRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPPTPLV 205

Query: 206 -----VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKEL 259
                V  +    +    PE  +A KD       +V L C   G P P+++W   +   L
Sbjct: 206 QRTDGVMGEYEPKIEVRFPETIQAAKD------SSVKLECFALGNPIPDISWRRLDGSPL 259

Query: 260 TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEV 319
            G          L+I +    D G Y C A N  G     G L          + +D  +
Sbjct: 260 PGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPPEWEQKIQDTYL 319

Query: 320 EAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQY 379
               S  + C A   P    +  WL+  E ++ +     +Q  + +L +T  +  DSG Y
Sbjct: 320 SIYDSLFWECKASGKPDPWYT--WLKNGERLNLDER---IQIENGTLIITMLNVSDSGIY 374

Query: 380 TCRAQTELDFIEAQATLTV 398
            C A+ +   I A A L V
Sbjct: 375 QCAAENKYQIIYANAELRV 393



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 108/285 (37%), Gaps = 32/285 (11%)

Query: 123 LAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGP 179
           L+ P FT EP+   F     +  +   C A+G P P   W HNG  I  +     R  G 
Sbjct: 13  LSPPIFTQEPQDAIFPLDLSKSEIILNCAANGYPLPHYRWKHNGADIDFSMSYHYRLDGG 72

Query: 180 NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVL 238
           +          D G Y C ATNSLG +         A+  +     +   +V +G+ VVL
Sbjct: 73  SLAISSPRTDQDIGTYQCLATNSLGTILSQKAKLQFAYIEDFETKTRSTVSVREGQGVVL 132

Query: 239 TCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCFA 289
            C     P P        W  N   L       R+   ETG+L I  V  +D G YTCF 
Sbjct: 133 LC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFI 188

Query: 290 RNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSLK 338
            NK    + QG  +  V+    +  +         PE  +     S    C A+ +P   
Sbjct: 189 TNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPIPD 248

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +S   L GS       + ++ +S    L +    + D G Y C A
Sbjct: 249 ISWRRLDGSP---LPGKVKYSKSQAI-LEIPNFQQEDEGFYECIA 289



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 14/190 (7%)

Query: 409 TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
           T +Q   A +  VSWN ++     G   GY+V  WT+   E  I ++ V+ G  TT  + 
Sbjct: 799 TSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVS-GNITTKNIT 857

Query: 469 KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VK 526
                +  FA V A+N A  GP S  ++  T +  P    +  A  L +S   L W  VK
Sbjct: 858 GLKANTVYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLTNSKLCLNWEHVK 917

Query: 527 PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGY 585
             +    ++GYKI Y+  + +K         +I +   TSA+L  L P    Y I +   
Sbjct: 918 TMENESEVLGYKILYRQNRQSKT--------HILETNNTSAEL--LVPFEEDYLIEIRTV 967

Query: 586 TKAGDGAESK 595
           +  GDG+ S+
Sbjct: 968 SDGGDGSSSE 977


>gi|351695047|gb|EHA97965.1| Neural cell adhesion molecule L1-like protein [Heterocephalus
           glaber]
          Length = 1126

 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 182/722 (25%), Positives = 302/722 (41%), Gaps = 86/722 (11%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+   + L C   G P PQ  W K G  + P  R ++ NYGK+L I+++ + D+G+Y C 
Sbjct: 170 LKGDTLLLECFAEGLPTPQVEWKKMGGDL-PKGRETKENYGKTLKIENISYRDKGNYRCT 228

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            +N +G A ++   + V   P +  +PE    +   +    C+A G P+P I W  NG P
Sbjct: 229 ANNFLGTA-NHDFHVIVEEPPRWRKKPESGVYSTGSSGILLCEAEGEPQPTIKWRVNGFP 287

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
           I          V P  ++  NL  + T  Y C A+N  G V  +  ++V+   P I    
Sbjct: 288 IGNHL-FAGDVVFPREVSFTNLHPNHTAVYQCEASNIHGTVLANANIDVVDVIPLIQTKD 346

Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
           ++ Y TV G +  L C  F +P+  V W  +   + L G RY I E G L+I      D+
Sbjct: 347 EENYATVIGYSAFLHCEYFASPEAIVTWQRMDEAQALEGRRYRIHENGTLQILGTTEEDA 406

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  V         C +  D  LK  L 
Sbjct: 407 GSYSCWVENAIGKTAVTANLDIRNATKLRVSPKNPRVPKSHILELHCESKCDSHLKHSLK 466

Query: 341 IVWLRGSEPIDFE---SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           + W +  E  DFE   +E   +  +  +LT++  +  D G ++C AQT LD I     +T
Sbjct: 467 LSWSKDGE--DFEINGTEDGRIVIDRANLTISNVTLEDQGVFSCLAQTALDSIAEATQVT 524

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIV 457
           V    + P N  L +  + +   +SW   +  +   +   Y V+    ++  G   EL  
Sbjct: 525 VLDVPDPPRNLQLSERQN-RSVRLSWEAGADHN--SNISEYIVEFEGNREEPGRWEELTR 581

Query: 458 NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF-----VTPEGVPGTVQSLEA 512
            +G+ TT  + +  P  +   RV A N      PS+   +       PE  P  ++   +
Sbjct: 582 VQGKETTALL-QLAPYVRYQFRVTAVNEVGKSHPSQPSDYHETPPAAPEKNPQNIRVQAS 640

Query: 513 IPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
            P       +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L 
Sbjct: 641 QP---KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLR 688

Query: 571 GLEPST--KYRIHLAGYTKAGDGAESK-YLFYVPFKNPDN---VEGRGSTPNNLV-ISWT 623
            + P+    Y + +    + G G E +  + Y     PD    V       + LV ++W+
Sbjct: 689 VMTPTVYAPYDVQVQAINQLGSGPEPQSVVLYSGEDYPDTAPVVHSVDVINSTLVKVTWS 748

Query: 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWT 683
            +P+   +     Y+I W        W    +LD R             P E+ +++   
Sbjct: 749 TIPKDRVHGHLKGYQINW--------WKTKSLLDGRT-----------HPKEVNILRFSG 789

Query: 684 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR----VLAFNGAYNGPPSEIISFVTP 739
           ++           N G          VP+   F+     VLA+N    GP SE   F TP
Sbjct: 790 QR-----------NYG---------MVPSLDAFSEFRLTVLAYNSKGVGPESEPYIFQTP 829

Query: 740 EG 741
           EG
Sbjct: 830 EG 831



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 124/571 (21%), Positives = 224/571 (39%), Gaps = 43/571 (7%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
           L C +  +P     W +         R  + +   +L I      D GSY+C V N +G+
Sbjct: 360 LHCEYFASPEAIVTWQRMDEAQALEGRRYRIHENGTLQILGTTEEDAGSYSCWVENAIGK 419

Query: 113 AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA---SGLPEP-EIHWVHNGKPIS- 167
             + + +L +  A    V P+     +   +   C++   S L    ++ W  +G+    
Sbjct: 420 T-AVTANLDIRNATKLRVSPKNPRVPKSHILELHCESKCDSHLKHSLKLSWSKDGEDFEI 478

Query: 168 QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKD 227
               + R  +    +TI N+   D G + C A  +L  + +   V VL    ++ + P++
Sbjct: 479 NGTEDGRIVIDRANLTISNVTLEDQGVFSCLAQTALDSIAEATQVTVL----DVPDPPRN 534

Query: 228 EYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG-----GRYTILETGDLKITDVAFADS 282
               + +   +            N      E  G     GR+  L     K T      +
Sbjct: 535 LQLSERQNRSVRLSWEAGADHNSNISEYIVEFEGNREEPGRWEELTRVQGKETTALLQLA 594

Query: 283 G----EYTCFARNKLGTAQGSGSLTVKEHTHITDQ--PEDYEVEAGQSAT-------FRC 329
                ++   A N++G +  S      E      +  P++  V+A Q           + 
Sbjct: 595 PYVRYQFRVTAVNEVGKSHPSQPSDYHETPPAAPEKNPQNIRVQASQPKEMIIKWEPLKS 654

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
              + P L+  + W     P+++E E       +++L V   +         +A  +L  
Sbjct: 655 MEQNGPGLEYRVTWKPQGAPVEWEEE----TVTNHTLRVMTPTVYAPYDVQVQAINQLGS 710

Query: 390 IEAQATLTVQVPLEAPSNFTLIQ---VIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
                ++ +    + P    ++    VI++    V+W+ +    + GH +GY++  W  K
Sbjct: 711 GPEPQSVVLYSGEDYPDTAPVVHSVDVINSTLVKVTWSTIPKDRVHGHLKGYQINWWKTK 770

Query: 447 ---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
              DG    +E+ + +  G+     V      S+    VLA+N    GP SE   F TPE
Sbjct: 771 SLLDGRTHPKEVNILRFSGQRNYGMVPSLDAFSEFRLTVLAYNSKGVGPESEPYIFQTPE 830

Query: 502 GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERLPYIS 560
           GVP     L+ I +      L W +P + NG L GY ++YQ +  T ++G L E    I+
Sbjct: 831 GVPEQPTFLKVIKVDKDTATLSWEQPMKLNGNLTGYLLQYQIINDTDEIGELNEI--NIT 888

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            P+ +S  L+ L  +TKY+ +L   T  G G
Sbjct: 889 TPSKSSWHLSNLNATTKYKFYLRACTSKGCG 919


>gi|395516497|ref|XP_003762424.1| PREDICTED: contactin-3 [Sarcophilus harrisii]
          Length = 1049

 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 167/634 (26%), Positives = 268/634 (42%), Gaps = 36/634 (5%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P +   ++ + N    L I + +  D G Y 
Sbjct: 259 AAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKMKKSN--GMLEIPNFQQEDSGLYE 316

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    + + AA E+ + +EC+ASG P+P   W+ NG
Sbjct: 317 CIAENSRGKNVARG-RLTYYAKPHWVQMIKDVEAAVEDNLYWECRASGKPKPSYRWLKNG 375

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +       R ++    ++I  L  +D+G Y C A N  G +Y    + V+A AP+ ++
Sbjct: 376 DGLVI---EERVQLENGALSISFLNVNDSGMYQCIAENKHGLIYSSAELKVVASAPDFSK 432

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
            P  +      G  V+  C+   +PK   +W    + L +  R TIL+ G+L+I +V   
Sbjct: 433 NPMKKLIQVQIGSLVIFDCKPKASPKAHCSWKKGDEVLQSSERITILKDGELQIANVTKL 492

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D G YTC A N+ G A  S +L V E T IT  P + +V  G+S    C    DP L + 
Sbjct: 493 DVGTYTCLAENQFGKASSSTNLIVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDIV 552

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S+   L +       SG+Y C  QTE+D + + A L
Sbjct: 553 FTWYFNGAITDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTEVDSVSSAAEL 612

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGEGSIRE 454
            V+     P +  + ++ D   A +SW     +    H     Y +Q  T       I  
Sbjct: 613 IVRGSPGPPESVKVDEITDT-TAQLSWK----EGTDNHSPVTSYVIQARTPFSVGWQIVT 667

Query: 455 LI--VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLE 511
            +  V  G++ T  V    P  +   RV+A N    G PS     V T E VP    S  
Sbjct: 668 TVPDVIDGKTFTATVVDLNPWVEYEFRVVANNKIGGGEPSLPSEKVRTEEAVPEVPPSEV 727

Query: 512 AIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
           +   GS S   + W  V  E  NG   GY + ++ +  T     +   P        +  
Sbjct: 728 SGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTTWIQTVVTSPDTPRYVFRNES 787

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNNLVISWT 623
           +    P   Y + +  Y   G+G  S    +F     P   P +V     + + + +SW 
Sbjct: 788 ILSFSP---YEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSHVLANSLSSSIIEVSWD 844

Query: 624 AMPEIEHNAPHFKYRI-FWRRHNTGEAWNQDDVL 656
           A+P    +     Y I +W      ++ N+  V+
Sbjct: 845 AIPWKMSSGRLLGYEIRYWNNGGKEDSSNRVKVM 878



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 168/637 (26%), Positives = 245/637 (38%), Gaps = 86/637 (13%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V   +       ++           P   V+ PE + AA
Sbjct: 201 LYIAKVEPSDVGNYTCVVTSTVTNNRVLGSPTPLVLRTDGVMGEYEPKIEVQFPETLPAA 260

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P S      + K     + I N ++ D+G Y C
Sbjct: 261 KGSTVKLECFALGNPVPQINWRRSDGLPFSS---KIKMKKSNGMLEIPNFQQEDSGLYEC 317

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K+V    L +   P   +  KD        +   CR  G PKP   W+ N
Sbjct: 318 IAENSRG---KNVARGRLTYYAKPHWVQMIKDVEAAVEDNLYWECRASGKPKPSYRWLKN 374

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
              L       LE G L I+ +   DSG Y C A NK G    S  L  V      +  P
Sbjct: 375 GDGLVIEERVQLENGALSISFLNVNDSGMYQCIAENKHGLIYSSAELKVVASAPDFSKNP 434

Query: 315 ED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
                +V+ G    F C   + P    S  W +G E +  +S  R     D  L +   +
Sbjct: 435 MKKLIQVQIGSLVIFDCKPKASPKAHCS--WKKGDEVL--QSSERITILKDGELQIANVT 490

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAV-----VSWN 424
           +LD G YTC A+ +     +   L V  P     APSN      +   ++V     V  +
Sbjct: 491 KLDVGTYTCLAENQFGKASSSTNLIVTEPTRITLAPSNMD----VSVGESVILPCQVQHD 546

Query: 425 PVSPQSLRGHFRGY-----KVQTWTEKDGEGSIRELIVNKGE---------STTTEVDKF 470
           P+       +F G      K  +  EK G  S  +L++   +            TEVD  
Sbjct: 547 PLLDIVFTWYFNGAITDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTEVDSV 606

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
             A++   R                      G PG  +S++   +  +   L W +    
Sbjct: 607 SSAAELIVR----------------------GSPGPPESVKVDEITDTTAQLSWKEGTDN 644

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           +  +  Y I  Q+     VG  ++  +P + D  T +A +  L P  +Y   +    K G
Sbjct: 645 HSPVTSYVI--QARTPFSVGWQIVTTVPDVIDGKTFTATVVDLNPWVEYEFRVVANNKIG 702

Query: 590 DGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  S      +    VP   P  V G G + + LVI+W  +PE   N   F Y + +R 
Sbjct: 703 GGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRP 762

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQP--TFQPYEIKV 678
                 W Q  V        V  N+   +F PYE+KV
Sbjct: 763 LGV-TTWIQTVVTSPDTPRYVFRNESILSFSPYEVKV 798



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 158/693 (22%), Positives = 273/693 (39%), Gaps = 102/693 (14%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  +   +R+   N   +L I  +  +D G Y C   N  G   
Sbjct: 359  CRASGKPKPSYRWLKNGDGLVIEERVQLEN--GALSISFLNVNDSGMYQCIAENKHGLIY 416

Query: 115  SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
            S S +L V+A AP F+  P  + I       V F+CK    P+    W    + +  +  
Sbjct: 417  S-SAELKVVASAPDFSKNPMKKLIQVQIGSLVIFDCKPKASPKAHCSWKKGDEVLQSSER 475

Query: 172  NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP-EITEAPKDEYT 230
                K G   + I N+ K D G Y C A N  G        N++   P  IT AP +   
Sbjct: 476  ITILKDG--ELQIANVTKLDVGTYTCLAENQFGKASSST--NLIVTEPTRITLAPSNMDV 531

Query: 231  VDGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDV 277
              G++V+L C+V   P  ++   W  N             E  GG      +GDL I ++
Sbjct: 532  SVGESVILPCQVQHDPLLDIVFTWYFNGAITDFKKDGSHFEKVGGS----SSGDLMIRNI 587

Query: 278  AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
                SG+Y C  + ++ +   +  L V+                G   + + + ++D + 
Sbjct: 588  QLKHSGKYVCMVQTEVDSVSSAAELIVRG-------------SPGPPESVKVDEITDTTA 634

Query: 338  KLSIVWLRGSE---PI-DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ-----TELD 388
            +LS  W  G++   P+  +  + R   S  + +  T    +D   +T          E +
Sbjct: 635  QLS--WKEGTDNHSPVTSYVIQARTPFSVGWQIVTTVPDVIDGKTFTATVVDLNPWVEYE 692

Query: 389  F--------------IEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
            F              + ++   T +   E P +          + V++W+PV  +   G 
Sbjct: 693  FRVVANNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGE 752

Query: 435  -------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
                   FR   V TW +           V + ES  +    F P      +V  +N   
Sbjct: 753  GFGYVVAFRPLGVTTWIQTVVTSPDTPRYVFRNESILS----FSPYE---VKVGVYNNKG 805

Query: 488  NGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSV 544
             GP S + +  + E  P    S + A  L SS   + W  +  +  +G L+GY+I+Y + 
Sbjct: 806  EGPFSPVTTVFSAEEEPTVAPSHVLANSLSSSIIEVSWDAIPWKMSSGRLLGYEIRYWNN 865

Query: 545  KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
             G +      R+  + +   TSA+L GL+ +  Y   +  Y  AG G  S  +       
Sbjct: 866  GGKEDSS--NRVKVMGN--ETSARLQGLQSNLVYYTAVRAYNSAGTGPFSATVNATTKKM 921

Query: 601  -PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
             P + P N+    +T + ++I+W  +  +++ +    Y++F+R  +     N  ++L+  
Sbjct: 922  PPSQPPANIVWN-ATESKVLINWEQVKAMDNESEVTGYKVFYRTSSQ----NNMNILNTN 976

Query: 660  Q--SELVLANQPTFQPYEIKVVQTWTEKDGEGS 690
            +  +EL+L   P  + Y I+V  +    DG  S
Sbjct: 977  KTWAELLL---PINEDYIIEVKASTDGGDGTSS 1006



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 181/458 (39%), Gaps = 44/458 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS-QGNYGKSLIIKHVEFSDQGSYTCEVS 107
           KKV L C   G P P   W  +G  I+ S     + N G  ++I      D G Y C  S
Sbjct: 64  KKVTLNCEAKGNPSPHYRWQLNGSDIDLSMEYRYKLNGGNLVVINPNRNRDTGIYQCFAS 123

Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVHN 162
           N +G   S    L       F T     ++  E + V   C   G P    E    W+ N
Sbjct: 124 NSLGTVVSKEAKLQFAYLENFKTKMRSTVSVREGQGVVLLC---GPPPHSGELSYAWIFN 180

Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDVYVNVL--- 215
             P S    + RR V      + I  +  SD GNY C  T+++    V       VL   
Sbjct: 181 EYP-SFVQEDRRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNNRVLGSPTPLVLRTD 239

Query: 216 ----AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILET- 269
                + P+I  + P+      G TV L C   G P P++NW  +       +  + ++ 
Sbjct: 240 GVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKMKKSN 299

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I +    DSG Y C A N  G     G LT     H     +D E     +  + C
Sbjct: 300 GMLEIPNFQQEDSGLYECIAENSRGKNVARGRLTYYAKPHWVQMIKDVEAAVEDNLYWEC 359

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   P  K S  WL+  + +  E     VQ  + +L+++  +  DSG Y C A+ +   
Sbjct: 360 RASGKP--KPSYRWLKNGDGLVIEER---VQLENGALSISFLNVNDSGMYQCIAENKHGL 414

Query: 390 IEAQATLTVQVPLEAPSNFT------LIQVIDAKKAVVSWNP-VSPQSLRGHFRGYKVQT 442
           I + A L V   + +  +F+      LIQV      +    P  SP++     +G +V  
Sbjct: 415 IYSSAELKV---VASAPDFSKNPMKKLIQVQIGSLVIFDCKPKASPKAHCSWKKGDEVLQ 471

Query: 443 WTE-----KDGEGSIRELI-VNKGESTTTEVDKFVPAS 474
            +E     KDGE  I  +  ++ G  T    ++F  AS
Sbjct: 472 SSERITILKDGELQIANVTKLDVGTYTCLAENQFGKAS 509



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 122/299 (40%), Gaps = 32/299 (10%)

Query: 123 LAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGP 179
           L  P F  EP    F   +EE+ VT  C+A G P P   W  NG  I  +     +  G 
Sbjct: 43  LQGPVFIREPSNSIFPVDSEEKKVTLNCEAKGNPSPHYRWQLNGSDIDLSMEYRYKLNGG 102

Query: 180 NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVL 238
           N + I   R  DTG Y C A+NSLG V         A+        +   +V +G+ VVL
Sbjct: 103 NLVVINPNRNRDTGIYQCFASNSLGTVVSKEAKLQFAYLENFKTKMRSTVSVREGQGVVL 162

Query: 239 TCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCFA 289
            C     P P        WI N+     +    R+   ETG L I  V  +D G YTC  
Sbjct: 163 LC----GPPPHSGELSYAWIFNEYPSFVQEDRRRFVSQETGHLYIAKVEPSDVGNYTCVV 218

Query: 290 RNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSLK 338
            + +   +  GS   L ++    + +         PE      G +    C A+ +P  +
Sbjct: 219 TSTVTNNRVLGSPTPLVLRTDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVPQ 278

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           ++  W R S+ + F S+ +  +SN   L +    + DSG Y C A+       A+  LT
Sbjct: 279 IN--WRR-SDGLPFSSKIKMKKSNGM-LEIPNFQQEDSGLYECIAENSRGKNVARGRLT 333



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 141/644 (21%), Positives = 237/644 (36%), Gaps = 73/644 (11%)

Query: 41   KKEVALRNKKVELF-CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
            KK + ++   + +F C    +P     W K    +  S+RI+    G+ L I +V   D 
Sbjct: 436  KKLIQVQIGSLVIFDCKPKASPKAHCSWKKGDEVLQSSERITILKDGE-LQIANVTKLDV 494

Query: 100  GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI-- 157
            G+YTC   N  G+A S S +L V      T+ P  ++ +  E+V   C+    P  +I  
Sbjct: 495  GTYTCLAENQFGKASS-STNLIVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDIVF 553

Query: 158  HWVHNGKPIS-QAPPNPRRKVGPNR---ITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
             W  NG     +   +   KVG +    + I N++   +G Y C     +  V     + 
Sbjct: 554  TWYFNGAITDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTEVDSVSSAAEL- 612

Query: 214  VLAHAPEITEAPKDEYTVDGKTVV-----------LTCRVFGAPKP-EVNW--IHNQKEL 259
            ++  +P   E+ K +   D    +           +T  V  A  P  V W  +    ++
Sbjct: 613  IVRGSPGPPESVKVDEITDTTAQLSWKEGTDNHSPVTSYVIQARTPFSVGWQIVTTVPDV 672

Query: 260  TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGS-GSLTVKEHTHITDQPEDYE 318
              G+     T    + D+      E+   A NK+G  + S  S  V+    + + P   E
Sbjct: 673  IDGK-----TFTATVVDLNPWVEYEFRVVANNKIGGGEPSLPSEKVRTEEAVPEVPPS-E 726

Query: 319  VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQ 378
            V  G  +        DP  +     L+  E   +    R +    +  TV  S   D+ +
Sbjct: 727  VSGGGGSRSELVITWDPVPEE----LQNGEGFGYVVAFRPLGVTTWIQTVVTSP--DTPR 780

Query: 379  YTCRAQTELDFIEAQATLTV-------------------QVPLEAPSNFTLIQVIDAKKA 419
            Y  R ++ L F   +  + V                   + P  APS+  L   + +   
Sbjct: 781  YVFRNESILSFSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSH-VLANSLSSSII 839

Query: 420  VVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR 479
             VSW+ +  +   G   GY+++ W     E S   + V  G  T+  +         +  
Sbjct: 840  EVSWDAIPWKMSSGRLLGYEIRYWNNGGKEDSSNRVKV-MGNETSARLQGLQSNLVYYTA 898

Query: 480  VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGY 537
            V A+N A  GP S  ++  T +  P    +        S   + W  VK       + GY
Sbjct: 899  VRAYNSAGTGPFSATVNATTKKMPPSQPPANIVWNATESKVLINWEQVKAMDNESEVTGY 958

Query: 538  KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL 597
            K+ Y++     +         I +   T A+L  L  +  Y I +   T  GDG  S+ +
Sbjct: 959  KVFYRTSSQNNMN--------ILNTNKTWAELL-LPINEDYIIEVKASTDGGDGTSSEQI 1009

Query: 598  FYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
                  N D   G  ST  N+    ++   I    P F  +I W
Sbjct: 1010 RIPRITNMD-ARGSSSTVRNVYPFLSSCISI---LPIFLVKILW 1049


>gi|200057|gb|AAA17403.1| neuronal glycoprotein [Mus musculus]
          Length = 1028

 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 166/626 (26%), Positives = 264/626 (42%), Gaps = 38/626 (6%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V L C   G P+PQ  W + DG+P    ++I    +   L I++ +  D GSY 
Sbjct: 239 AAKGSTVRLECFALGNPVPQINWRRSDGMPF--PNKIKLRKFNGMLEIQNFQQEDTGSYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
               N  G+  +    L+  A PY+      +  A E+++ +EC+ASG P+P   W+ NG
Sbjct: 297 GIAENSRGKNVARG-RLTYYAKPYWLQLLRDVEIAVEDSLYWECRASGKPKPSYRWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +       R ++    +TI NL  +D+G + C A N  G +Y    + V+A AP+ + 
Sbjct: 356 DALVL---EERIQIENGALTITNLNVTDSGMFQCIAENKHGLIYSSAELKVVASAPDFSR 412

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
            P  +      G  V+L C+   +P+    W      +    R + L  G LKI +V  A
Sbjct: 413 NPMKKMVQVQVGSLVILDCKPRASPRALSFWKKGDMMVREQARVSFLNDGGLKIMNVTKA 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A G+  L V E T I   P + +V  G+S    C    DP L + 
Sbjct: 473 DAGTYTCTAENQFGKANGTTHLVVTEPTRIILAPSNMDVAVGESVILPCQVQHDPLLDIM 532

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 533 FAWYFNGALTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAAEL 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKD-GEGSIR 453
            V+     P N  + ++ D   A +SW     +    H     Y VQ  T    G  S+R
Sbjct: 593 IVRGSPGPPENVKVDEITDT-TAQLSWT----EGTDSHSPVISYAVQARTPFSVGWQSVR 647

Query: 454 ELI-VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLE 511
            +  V  G++ T  V +  P  +   R++A N    G PS     V T E  P    S  
Sbjct: 648 TVPEVIDGKTHTATVVELNPWVEYEFRIVASNKIGGGEPSLPSEKVRTEEAAPEIAPSEV 707

Query: 512 AIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
           +   GS S   + W  V  E  NG   GY + ++ +    V   ++ +    D      +
Sbjct: 708 SGGGGSRSELVITWDPVPEELQNGGGFGYVVAFRPL---GVTTWIQTVVTSPDNPRYVFR 764

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNNLVISWT 623
              + P + Y + +  Y   G+G  S    +F     P   P ++     + + + +SW 
Sbjct: 765 NESIVPFSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVSWN 824

Query: 624 AMPEIEHNAPHFKYRI-FWRRHNTGE 648
            +P    N     Y + +W  +N GE
Sbjct: 825 TIPWKLSNGHLLGYEVRYW--NNGGE 848



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 156/625 (24%), Positives = 245/625 (39%), Gaps = 62/625 (9%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V   +       ++           P   V+ PE + AA
Sbjct: 181 LYIAKVEPSDVGNYTCVVTSTVTNTRVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 240

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P    P   + +     + I+N ++ DTG+Y  
Sbjct: 241 KGSTVRLECFALGNPVPQINWRRSDGMPF---PNKIKLRKFNGMLEIQNFQQEDTGSYEG 297

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K+V    L +   P   +  +D       ++   CR  G PKP   W+ N
Sbjct: 298 IAENSRG---KNVARGRLTYYAKPYWLQLLRDVEIAVEDSLYWECRASGKPKPSYRWLKN 354

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
              L       +E G L IT++   DSG + C A NK G    S  L  V      +  P
Sbjct: 355 GDALVLEERIQIENGALTITNLNVTDSGMFQCIAENKHGLIYSSAELKVVASAPDFSRNP 414

Query: 315 --EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
             +  +V+ G      C   + P   LS  W +G   +  ++   F+  ND  L +   +
Sbjct: 415 MKKMVQVQVGSLVILDCKPRASPR-ALSF-WKKGDMMVREQARVSFL--NDGGLKIMNVT 470

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQ 429
           + D+G YTC A+ +         L V  P   + APSN   + V   +  ++        
Sbjct: 471 KADAGTYTCTAENQFGKANGTTHLVVTEPTRIILAPSN---MDVAVGESVILPCQVQHDP 527

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
            L   F  Y     T+   +GS  E +   G S+   + + +    +   V       + 
Sbjct: 528 LLDIMFAWYFNGALTDFKKDGSHFEKV--GGSSSGDLMIRNIQLKHSGKYVCMVQTGVDS 585

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK--------Y 541
             S     V   G PG  ++++   +  +   L W +    +  ++ Y ++        +
Sbjct: 586 VSSAAELIV--RGSPGPPENVKVDEITDTTAQLSWTEGTDSHSPVISYAVQARTPFSVGW 643

Query: 542 QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------K 595
           QSV+          +P + D  T +A +  L P  +Y   +    K G G  S      +
Sbjct: 644 QSVR---------TVPEVIDGKTHTATVVELNPWVEYEFRIVASNKIGGGEPSLPSEKVR 694

Query: 596 YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDV 655
                P   P  V G G + + LVI+W  +PE   N   F Y + +R       W Q  V
Sbjct: 695 TEEAAPEIAPSEVSGGGGSRSELVITWDPVPEELQNGGGFGYVVAFRPLGV-TTWIQTVV 753

Query: 656 LDWRQSELVLANQPT--FQPYEIKV 678
                   V  N+    F PYE+KV
Sbjct: 754 TSPDNPRYVFRNESIVPFSPYEVKV 778



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 164/729 (22%), Positives = 277/729 (37%), Gaps = 106/729 (14%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  +   +RI   N   +L I ++  +D G + C   N  G   
Sbjct: 339  CRASGKPKPSYRWLKNGDALVLEERIQIEN--GALTITNLNVTDSGMFQCIAENKHGLIY 396

Query: 115  SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
            S S +L V+A AP F+  P  + +       V  +CK    P     W      + +   
Sbjct: 397  S-SAELKVVASAPDFSRNPMKKMVQVQVGSLVILDCKPRASPRALSFWKKGDMMVREQAR 455

Query: 172  NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
                  G   + I N+ K+D G Y C A N  G      ++ V+     I  AP +    
Sbjct: 456  VSFLNDG--GLKIMNVTKADAGTYTCTAENQFGKANGTTHL-VVTEPTRIILAPSNMDVA 512

Query: 232  DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
             G++V+L C+V   P  ++   W  N             E  GG      +GDL I ++ 
Sbjct: 513  VGESVILPCQVQHDPLLDIMFAWYFNGALTDFKKDGSHFEKVGGS----SSGDLMIRNIQ 568

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
               SG+Y C  +  + +   +  L V+        PE+ +V+           ++D + +
Sbjct: 569  LKHSGKYVCMVQTGVDSVSSAAELIVRGSP---GPPENVKVDE----------ITDTTAQ 615

Query: 339  LSIVWLRGSEP----IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
            LS  W  G++     I +  + R   S  +    T    +D   +T        ++E + 
Sbjct: 616  LS--WTEGTDSHSPVISYAVQARTPFSVGWQSVRTVPEVIDGKTHTATVVELNPWVEYEF 673

Query: 395  TLTVQVPL---------------EAPSNFTLIQVIDA----KKAVVSWNPVSPQSLRG-- 433
             +     +               EA       +V        + V++W+PV P+ L+   
Sbjct: 674  RIVASNKIGGGEPSLPSEKVRTEEAAPEIAPSEVSGGGGSRSELVITWDPV-PEELQNGG 732

Query: 434  ------HFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
                   FR   V TW +           V + ES        VP S    +V  +N   
Sbjct: 733  GFGYVVAFRPLGVTTWIQTVVTSPDNPRYVFRNES-------IVPFSPYEVKVGVYNNKG 785

Query: 488  NGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSV 544
             GP S + +  + E  P    S + A  L SS   + W  +  +  NG L+GY+++Y + 
Sbjct: 786  EGPFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNN 845

Query: 545  KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
             G +      ++        TSA L GL+ +  Y   +  Y  AG G  S  +       
Sbjct: 846  GGEEESSRKVKVA----GNQTSAVLRGLKSNLAYYTAVRAYNSAGAGPFSATVNATTKKT 901

Query: 601  -PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
             P + P NV    +T   ++++W  +  +E+ +    Y++F+R  +     N   VL+  
Sbjct: 902  PPSQPPGNVVWN-ATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQ----NNVHVLNTN 956

Query: 660  Q--SELVLANQPTFQPYEIKVVQTWTEKDGEGS----IRELIVNKGESTTTEVDKFVPAS 713
            +  +EL+L   P  + Y I+V  T    DG  S    I  +       +T+ +    P S
Sbjct: 957  KTSAELLL---PIKEDYIIEVKATTDGGDGTSSEQIRIPRITSMDARGSTSAISNIHPLS 1013

Query: 714  KNFARVLAF 722
               + +L F
Sbjct: 1014 GYMSVLLFF 1022



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 148/371 (39%), Gaps = 30/371 (8%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           +KK+ L C   G P P   W  +G  I+ S D   + N G  ++I      D GSY C  
Sbjct: 43  DKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLNGGNLIVINPNRNWDTGSYQCFA 102

Query: 107 SNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVH 161
           +N +G   S    L       F T     ++  E + V   C   G P    E    WV 
Sbjct: 103 TNSLGTIVSREAKLQFAYLENFKTRMRSTVSVREGQGVVLLC---GPPPHSGELSYAWVF 159

Query: 162 NGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LG----YVYKD 209
           N  P S    + RR V      + I  +  SD GNY C  T++      LG     V + 
Sbjct: 160 NEYP-SFVEEDSRRLVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNTRVLGSPTPLVLRS 218

Query: 210 VYVNVLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE 268
             V +  + P+I  + P+      G TV L C   G P P++NW  +       +  + +
Sbjct: 219 DGV-MGEYEPKIEVQFPETLPAAKGSTVRLECFALGNPVPQINWRRSDGMPFPNKIKLRK 277

Query: 269 -TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
             G L+I +    D+G Y   A N  G     G LT     +      D E+    S  +
Sbjct: 278 FNGMLEIQNFQQEDTGSYEGIAENSRGKNVARGRLTYYAKPYWLQLLRDVEIAVEDSLYW 337

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   P  K S  WL+  + +  E     +Q  + +LT+T  +  DSG + C A+ + 
Sbjct: 338 ECRASGKP--KPSYRWLKNGDALVLEER---IQIENGALTITNLNVTDSGMFQCIAENKH 392

Query: 388 DFIEAQATLTV 398
             I + A L V
Sbjct: 393 GLIYSSAELKV 403



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 122/300 (40%), Gaps = 32/300 (10%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +E++ +T  C+A G P P   W  NG  I  +  +  +  G
Sbjct: 22  LLQGPVFIKEPSNSIFPVDSEDKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLNG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N I I   R  DTG+Y C ATNSLG +         A+        +   +V +G+ VV
Sbjct: 82  GNLIVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTRMRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        W+ N+     E    R    ETG L I  V  +D G YTC 
Sbjct: 142 LLC----GPPPHSGELSYAWVFNEYPSFVEEDSRRLVSQETGHLYIAKVEPSDVGNYTCV 197

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
             + +   +  GS   L ++    + +         PE      G +    C A+ +P  
Sbjct: 198 VTSTVTNTRVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVRLECFALGNPVP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +++  W R S+ + F ++ +  + N   L +    + D+G Y   A+       A+  LT
Sbjct: 258 QIN--WRR-SDGMPFPNKIKLRKFNGM-LEIQNFQQEDTGSYEGIAENSRGKNVARGRLT 313


>gi|410986311|ref|XP_003999454.1| PREDICTED: contactin-2 [Felis catus]
          Length = 1045

 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 168/623 (26%), Positives = 266/623 (42%), Gaps = 45/623 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+PQ  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 256 ALVGQQVTLECFAFGNPVPQIKWRKVDGSLSPQWATAE----PTLQIPSVAFEDEGTYEC 311

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           E  N  G   +    + V A P +      + A     + + C A+G P P + W+ NG+
Sbjct: 312 EAENSKGR-DTVQGRIIVQAQPEWLKVISDMEADIGSNLRWGCAAAGKPRPTVRWLRNGE 370

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           P++      R +V    +    L   D+G Y C A N  G +Y    + V A AP+    
Sbjct: 371 PLAS---QNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLN 427

Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           P         G  +V+ C+   APK  V W    + L    R T+   G L I +++ +D
Sbjct: 428 PVKRLIPAARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSD 487

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+YTCFA N +G A  +G L+V++ T IT  P   +V  G S T +C+A  DP++ L+ 
Sbjct: 488 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADVNLGDSLTLQCHASHDPTMDLTF 547

Query: 342 VWLRGSEPIDFES-----EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
           +W     PID +          V+     LT+  +     G+YTC AQT +D    +AT+
Sbjct: 548 IWTLDDFPIDVDKPGGHYRRASVKETVGDLTILNAQLRHGGKYTCMAQTVVDSASKEATV 607

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GSIR 453
            V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G+   +R
Sbjct: 608 LVRGPPGPPGGVVVRNIGDT-TVQLSWS----RGFDNHSPIAKYTLQARTPPAGKWKQVR 662

Query: 454 ELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGVPGTVQ 508
               N +G + T +V    P      RVLA N    G  +GP S+I    T E  P    
Sbjct: 663 TNPANIEGNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSKI---RTKEAAPSVAP 719

Query: 509 SLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565
           S  +   G+     + W  +  E  NG   GY + ++    T       R+P  +D    
Sbjct: 720 SGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTSWQ--TARVPG-ADARHF 776

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEGRGSTPNNLVI 620
                 ++P T + + +  Y + GDG ES           P   P  V  +G + + + +
Sbjct: 777 VYSNDSVQPYTPFEVKIRSYNRRGDGPESLTTLVHSAEEEPRVAPTKVWAKGVSSSEMNV 836

Query: 621 SWTAMPEIEHNAPHFKYRI-FWR 642
           +W  + + + N     Y I +W+
Sbjct: 837 TWEPVQQ-DMNGILLGYEIRYWK 858



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 148/375 (39%), Gaps = 38/375 (10%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN--PSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           +KV L C    +P     W  +G  +   P  R  Q   G  +I+   +  D G Y C  
Sbjct: 60  EKVTLACRARASPPATYRWKMNGTEMKLVPGSR-HQLVGGNLVIMNPTKAQDAGVYQCLA 118

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIH------- 158
           SN VG   S    L       F    EF     +   T E     LP  P  H       
Sbjct: 119 SNPVGTIVSREAVLR------FGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYR 172

Query: 159 WVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY----- 211
           W+ N  P +  P + R  V      + I     SD GNY C AT+ + +  K V+     
Sbjct: 173 WLLNEFP-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQ 231

Query: 212 VNVLAH-----APEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           +N+ A      AP I    P + Y + G+ V L C  FG P P++ W      L+    T
Sbjct: 232 LNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPQIKWRKVDGSLSPQWAT 291

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
              T  L+I  VAF D G Y C A N  G     G + V+          D E + G + 
Sbjct: 292 AEPT--LQIPSVAFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDMEADIGSNL 349

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P  + ++ WLR  EP+  ++    +  +   L  +K S  DSG Y C A+ 
Sbjct: 350 RWGCAAAGKP--RPTVRWLRNGEPLASQNRVEVLAGD---LRFSKLSLEDSGMYQCVAEN 404

Query: 386 ELDFIEAQATLTVQV 400
           +   I A A L VQ 
Sbjct: 405 KHGTIYASAELAVQA 419



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 148/656 (22%), Positives = 232/656 (35%), Gaps = 89/656 (13%)

Query: 88  SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
           +L I     SD G+Y+C      + S     +K   ++L+     L AP      P    
Sbjct: 196 NLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDTRLFAPSIKARFPAETY 255

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + VT EC A G P P+I W      +S     P+       + I ++   D G Y 
Sbjct: 256 ALVGQQVTLECFAFGNPVPQIKWRKVDGSLS-----PQWATAEPTLQIPSVAFEDEGTYE 310

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V A  PE  +   D     G  +   C   G P+P V W+ N 
Sbjct: 311 CEAENSKGRDTVQGRIIVQAQ-PEWLKVISDMEADIGSNLRWGCAAAGKPRPTVRWLRNG 369

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
           + L       +  GDL+ + ++  DSG Y C A NK GT   S  L V+         P 
Sbjct: 370 EPLASQNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPV 429

Query: 316 DYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
              + A  G      C   + P  K  ++W +G+E +   S  R   + D +L +   S 
Sbjct: 430 KRLIPAARGGEIVIPCQPRAAP--KAVVLWSKGTEILVNSS--RVTVTPDGTLIIRNISR 485

Query: 374 LDSGQYTC-----------------RAQTELDFIEAQA--------TLTVQVPLEAPSNF 408
            D G+YTC                 R  T++    + A        TL      +   + 
Sbjct: 486 SDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADVNLGDSLTLQCHASHDPTMDL 545

Query: 409 TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
           T I  +D         P+      GH+R   V+   E  G+ +I    +  G   T    
Sbjct: 546 TFIWTLDDF-------PIDVDKPGGHYRRASVK---ETVGDLTILNAQLRHGGKYTCMAQ 595

Query: 469 KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPE 528
             V ++   A VL                            +    +G +   L W +  
Sbjct: 596 TVVDSASKEATVLVRGPPG------------------PPGGVVVRNIGDTTVQLSWSRGF 637

Query: 529 QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
             +  +  Y ++ ++    K   +    P   +    +A++ GL P   Y   +      
Sbjct: 638 DNHSPIAKYTLQARTPPAGKWKQVRTN-PANIEGNAETAQVLGLTPWMDYEFRVLASNIL 696

Query: 589 GDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G G  S      +     P   P  + G G  P  L+++WT M     N   F Y + +R
Sbjct: 697 GTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFR 756

Query: 643 RHNTGEAWNQDDVLDWRQSELVLAN---QPTFQPYEIKVVQTWTEKDGEGSIRELI 695
           R  +  +W    V        V +N   QP + P+E+K+       DG  S+  L+
Sbjct: 757 RQGS-TSWQTARVPGADARHFVYSNDSVQP-YTPFEVKIRSYNRRGDGPESLTTLV 810



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 140/607 (23%), Positives = 230/607 (37%), Gaps = 70/607 (11%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P+   +R+        L    +   D G Y C   N  G   
Sbjct: 353 CAAAGKPRPTVRWLRNGEPLASQNRVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTIY 410

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F + P    I AA    +   C+    P+  + W    + +  +  
Sbjct: 411 A-SAELAVQALAPDFRLNPVKRLIPAARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSS- 468

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V P+  + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 469 --RVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADV 525

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G ++ L C     P  ++ +I    +        GG Y   ++ ET GDL I +    
Sbjct: 526 NLGDSLTLQCHASHDPTMDLTFIWTLDDFPIDVDKPGGHYRRASVKETVGDLTILNAQLR 585

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE-----DYEVEAGQS---------AT 326
             G+YTC A+  + +A    ++ V+               D  V+   S         A 
Sbjct: 586 HGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRNIGDTTVQLSWSRGFDNHSPIAK 645

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQYT 380
           +   A + P+ K   V    + P + E      Q        DY   V  S+ L +G+ +
Sbjct: 646 YTLQARTPPAGKWKQV---RTNPANIEGNAETAQVLGLTPWMDYEFRVLASNILGTGEPS 702

Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
               +++   EA  ++                     + +V+W P+S +   G   GY +
Sbjct: 703 G-PSSKIRTKEAAPSVAPSG--------LSGGGGAPGELIVNWTPMSREYQNGDGFGYLL 753

Query: 441 QTWTEKDGEGSIRELIVNKGEST--TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
                + G  S +   V   ++       D   P +    ++ ++N   +GP S      
Sbjct: 754 SF--RRQGSTSWQTARVPGADARHFVYSNDSVQPYTPFEVKIRSYNRRGDGPESLTTLVH 811

Query: 499 TPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKGTKVGPLLERL 556
           + E  P    + + A  + SS   + W   +Q  NG+L+GY+I+Y      +      R 
Sbjct: 812 SAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGILLGYEIRYWKAGDKEAAADRVRT 871

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPN 616
             +     TSA++  L P+TKY + +  Y +AG G  S        K P         P 
Sbjct: 872 AGLD----TSARVTDLHPNTKYHVTVRAYNRAGTGPASPSANATTMKPPPQ-----RPPG 922

Query: 617 NLVISWT 623
           N  ISWT
Sbjct: 923 N--ISWT 927



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 115/299 (38%), Gaps = 34/299 (11%)

Query: 126 PYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
           P F  +P    F   + EE VT  C+A   P     W  NG  +   P +  + VG N +
Sbjct: 42  PVFEDQPLGLLFPEESTEEKVTLACRARASPPATYRWKMNGTEMKLVPGSRHQLVGGNLV 101

Query: 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTCR 241
            +   +  D G Y C A+N +G +     V       E ++  +D   T +G  V+L C 
Sbjct: 102 IMNPTKAQDAGVYQCLASNPVGTIVSREAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCN 161

Query: 242 VFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGTA 296
                P     W+ N+      T GR+ + + TG+L I     +D G Y+C A + +  +
Sbjct: 162 PPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFS 221

Query: 297 QGSGSLTVKEHTHITDQPEDYEVEA---------------GQSATFRCNAVSDPSLKLSI 341
             S      +   +    ED  + A               GQ  T  C A  +P  +  I
Sbjct: 222 TKS---VFSKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPQ--I 276

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
            W +    +D    P++  + + +L +   +  D G Y C A+        Q  + VQ 
Sbjct: 277 KWRK----VDGSLSPQWATA-EPTLQIPSVAFEDEGTYECEAENSKGRDTVQGRIIVQA 330


>gi|326928135|ref|XP_003210238.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
           [Meleagris gallopavo]
          Length = 1225

 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 144/509 (28%), Positives = 232/509 (45%), Gaps = 32/509 (6%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
           ++L CI  G P P   W K    + P D+     +GK L I++V  +D+G+Y C  SN V
Sbjct: 275 LQLECIAEGLPTPHLSWVKVTENL-PKDKPVTDKFGKVLKIENVSAADEGTYQCTASNPV 333

Query: 111 GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAP 170
           G AK +   + V   P +  EP     +  E +   C+A G PEP I W  NG PI    
Sbjct: 334 GRAK-HEFHVHVEEPPRWIKEPRGGVYSLGENLLLLCEAIGNPEPTIQWKLNGMPIDSR- 391

Query: 171 PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
              R ++    +++ NL+  DT  Y C A+N  G +     VNVL  AP I  +  + Y 
Sbjct: 392 -TFRGRISDGELSLTNLQLQDTAVYHCEASNKHGTLLASANVNVLNIAPLILTSDGENYA 450

Query: 231 -VDGKTVVLTCRVFGAPKPEVNWIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYTC 287
            V G +  L C +F +P  +V W  +   + L+  RY + + G L+I +    DSG Y C
Sbjct: 451 AVVGYSAFLHCEIFASPAADVRWTKDDSIEPLSALRYELNKNGTLEIKETKKEDSGSYAC 510

Query: 288 FARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LSIVWLR 345
           +A N +G    + +L +++ T I   P++ +V    S   +C +  D  LK    + W +
Sbjct: 511 WAANSVGKRAITANLDIRDATKIVITPKNPQVLKSHSILLKCQSEYDSHLKNSFKLSWRK 570

Query: 346 GSEPIDFES--EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE 403
               +   S  + R +   D +L ++     D G YTC A T LD + A+  L V    +
Sbjct: 571 DGYELSVSSIQDSRIIMDMD-TLFISNVMLEDQGIYTCVASTSLDSVTAKTRLIVLDVPD 629

Query: 404 APSNFTLIQVIDAKKAVVSW----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            P +  L +  + +   +SW    N  SP  +      ++   W      G  +EL    
Sbjct: 630 PPEDLQLSEHQN-RSVRLSWKAGANHNSP--VNESIIEFEESRWE----PGRWQELARAP 682

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-IISFVTPEGVPGTVQSLEAIPLGSS 518
           G +TTT +    P +    RV++ N      PS+  + +VTP   P   ++ E I + +S
Sbjct: 683 GNTTTTLL-SLAPYTNYQFRVISVNAVGRSQPSKPSLRYVTPPAAPD--KNPENIRVEAS 739

Query: 519 ---AFYLKW--VKPEQPNGVLMGYKIKYQ 542
                 +KW  +K  + NG  + YK+ ++
Sbjct: 740 EPNEMVMKWEPLKSMERNGPGLEYKVSWR 768



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 169/684 (24%), Positives = 278/684 (40%), Gaps = 90/684 (13%)

Query: 30  RHAPKQQYVTRKKEVALRNKKVEL------FCIFGGTPLPQTIWSKDGVPINPSDRISQG 83
           +H P+ + V+   +  L    VE       +C F   P  +TI  K  +P+  + ++S+ 
Sbjct: 173 QHIPQDERVSMSLKGDLYFANVEENDSRSDYCCFAAFPKLRTIVQK--MPM--TLKVSR- 227

Query: 84  NYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETV 143
                   KH   S   +     +N + E K           P   + PE   ++   TV
Sbjct: 228 -------FKHANDSGSPNAAVTKANFIKERK-----------PKLLIPPESAGSSSSVTV 269

Query: 144 T------FECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
                   EC A GLP P + WV   + + +  P    K G   + IEN+  +D G Y C
Sbjct: 270 IKGGVLQLECIAEGLPTPHLSWVKVTENLPKDKP-VTDKFG-KVLKIENVSAADEGTYQC 327

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK 257
            A+N +G    + +V+V    P   + P+      G+ ++L C   G P+P + W  N  
Sbjct: 328 TASNPVGRAKHEFHVHV-EEPPRWIKEPRGGVYSLGENLLLLCEAIGNPEPTIQWKLNGM 386

Query: 258 ELTGGRYT-ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI--TDQP 314
            +    +   +  G+L +T++   D+  Y C A NK GT   S ++ V     +  T   
Sbjct: 387 PIDSRTFRGRISDGELSLTNLQLQDTAVYHCEASNKHGTLLASANVNVLNIAPLILTSDG 446

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
           E+Y    G SA   C   + P+    + W +  + I+  S  R+  + + +L + ++ + 
Sbjct: 447 ENYAAVVGYSAFLHCEIFASPAA--DVRWTK-DDSIEPLSALRYELNKNGTLEIKETKKE 503

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
           DSG Y C A   +      A L ++               DA K V++  P +PQ L+ H
Sbjct: 504 DSGSYACWAANSVGKRAITANLDIR---------------DATKIVIT--PKNPQVLKSH 546

Query: 435 FRGYKVQTWTEKDGEGSIR--------ELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
               K Q+  +   + S +        EL V+  + +   +D       N   +L   G 
Sbjct: 547 SILLKCQSEYDSHLKNSFKLSWRKDGYELSVSSIQDSRIIMDMDTLFISNV--MLEDQGI 604

Query: 487 YNGPPSEIISFVTPE------GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
           Y    S  +  VT +       VP   + L+     + +  L W      N  +    I+
Sbjct: 605 YTCVASTSLDSVTAKTRLIVLDVPDPPEDLQLSEHQNRSVRLSWKAGANHNSPVNESIIE 664

Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-YLFY 599
           ++  +  + G   E       P  T+  L  L P T Y+  +      G    SK  L Y
Sbjct: 665 FEESRW-EPGRWQE---LARAPGNTTTTLLSLAPYTNYQFRVISVNAVGRSQPSKPSLRY 720

Query: 600 V-----PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
           V     P KNP+N+    S PN +V+ W  +  +E N P  +Y++ WR+      WN++ 
Sbjct: 721 VTPPAAPDKNPENIRVEASEPNEMVMKWEPLKSMERNGPGLEYKVSWRQRGVETEWNEET 780

Query: 655 VLDWRQSELVLANQPTFQPYEIKV 678
           V   ++  L L N PTF PYEIKV
Sbjct: 781 V---KKHSLTLRNTPTFVPYEIKV 801



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 138/574 (24%), Positives = 247/574 (43%), Gaps = 49/574 (8%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPINPSDRIS-QGNYGKSLIIKHVEFSDQGSYTCEVSNGVG 111
            L C    +P     W+KD   I P   +  + N   +L IK  +  D GSY C  +N VG
Sbjct: 459  LHCEIFASPAADVRWTKDD-SIEPLSALRYELNKNGTLEIKETKKEDSGSYACWAANSVG 517

Query: 112  EAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA---SGLPEP-EIHWVHNGKPIS 167
            + ++ + +L +  A    + P+     +  ++  +C++   S L    ++ W  +G  +S
Sbjct: 518  K-RAITANLDIRDATKIVITPKNPQVLKSHSILLKCQSEYDSHLKNSFKLSWRKDGYELS 576

Query: 168  QAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
             +     R +   + + I N+   D G Y C A+ SL  V     + VL    ++ + P+
Sbjct: 577  VSSIQDSRIIMDMDTLFISNVMLEDQGIYTCVASTSLDSVTAKTRLIVL----DVPDPPE 632

Query: 227  DEYTVD--GKTVVLTCRV---FGAPKPEVNWIHNQKELTGGRYTILET--GDLKITDVAF 279
            D    +   ++V L+ +      +P  E      +     GR+  L    G+   T ++ 
Sbjct: 633  DLQLSEHQNRSVRLSWKAGANHNSPVNESIIEFEESRWEPGRWQELARAPGNTTTTLLSL 692

Query: 280  A--DSGEYTCFARNKLGTAQGSG-SLTVKEHTHITDQ-PEDYEVEAGQS-------ATFR 328
            A   + ++   + N +G +Q S  SL         D+ PE+  VEA +           +
Sbjct: 693  APYTNYQFRVISVNAVGRSQPSKPSLRYVTPPAAPDKNPENIRVEASEPNEMVMKWEPLK 752

Query: 329  CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
                + P L+  + W +     ++  E        +SLT+  +      +   +A   L 
Sbjct: 753  SMERNGPGLEYKVSWRQRGVETEWNEE----TVKKHSLTLRNTPTFVPYEIKVQAINNLG 808

Query: 389  FIEAQATLTV-----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW 443
                +  +T       +P  APS  + + ++++    V W  +    +RGH RGYKV  W
Sbjct: 809  -AGPEPNITTGYSGEDIPDAAPSGVS-VDIVNSTLVKVFWFGIPRDRVRGHLRGYKVSWW 866

Query: 444  TEK---DGEGSI--RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
              K   DG+     +  +   G+     +    P S+    VLA+N   +GP S  + F 
Sbjct: 867  KTKSMLDGKRHHPEKHFLTFVGDRNYGMIPGLDPFSEFRLTVLAYNSRGDGPESAPVVFE 926

Query: 499  TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERLP 557
            TPEGVP   + L+ +     +  L W  P++ NG + GY ++YQ +  T ++GPL++   
Sbjct: 927  TPEGVPEQPRFLKILNFDKDSVTLSWGLPKRANGHITGYILQYQIINETHEIGPLMDI-- 984

Query: 558  YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             +++ TT S +L  L PSTKY+ ++   T  G G
Sbjct: 985  SVANHTTLSWRLMDLSPSTKYKFYVKACTAKGCG 1018



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 138/596 (23%), Positives = 242/596 (40%), Gaps = 71/596 (11%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSD---RISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           L C   G P P   W  +G+PI+      RIS G     L + +++  D   Y CE SN 
Sbjct: 367 LLCEAIGNPEPTIQWKLNGMPIDSRTFRGRISDG----ELSLTNLQLQDTAVYHCEASNK 422

Query: 110 VGEA-KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG--KPI 166
            G    S ++++  +A    T + E   A    +    C+    P  ++ W  +   +P+
Sbjct: 423 HGTLLASANVNVLNIAPLILTSDGENYAAVVGYSAFLHCEIFASPAADVRWTKDDSIEPL 482

Query: 167 SQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPEITEA 224
           S      R ++  N  + I+  +K D+G+Y C A NS+G   + +  N+ +  A +I   
Sbjct: 483 SAL----RYELNKNGTLEIKETKKEDSGSYACWAANSVGK--RAITANLDIRDATKIVIT 536

Query: 225 PKDEYTVDGKTVVLTCRV----FGAPKPEVNWIHNQKELTGGRY----TILETGDLKITD 276
           PK+   +   +++L C+           +++W  +  EL+         I++   L I++
Sbjct: 537 PKNPQVLKSHSILLKCQSEYDSHLKNSFKLSWRKDGYELSVSSIQDSRIIMDMDTLFISN 596

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN----AV 332
           V   D G YTC A   L +      L V +   + D PED ++   Q+ + R +    A 
Sbjct: 597 VMLEDQGIYTCVASTSLDSVTAKTRLIVLD---VPDPPEDLQLSEHQNRSVRLSWKAGAN 653

Query: 333 SDPSLKLSIVWLRGS--EPIDFESEPR-----------FVQSNDYSLTVTKSSELDSGQY 379
            +  +  SI+    S  EP  ++   R                +Y   V   + +   Q 
Sbjct: 654 HNSPVNESIIEFEESRWEPGRWQELARAPGNTTTTLLSLAPYTNYQFRVISVNAVGRSQ- 712

Query: 380 TCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYK 439
              ++  L ++   A      P + P N   ++  +  + V+ W P+      G    YK
Sbjct: 713 --PSKPSLRYVTPPA-----APDKNPENIR-VEASEPNEMVMKWEPLKSMERNGPGLEYK 764

Query: 440 VQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           V +W ++  E    E  V K   T      FVP      +V A N    GP   I +  +
Sbjct: 765 V-SWRQRGVETEWNEETVKKHSLTLRNTPTFVPYE---IKVQAINNLGAGPEPNITTGYS 820

Query: 500 PEGVPGTVQSLEAIPL-GSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK----GTKVGPL 552
            E +P    S  ++ +  S+   + W  +  ++  G L GYK+ +   K    G +  P 
Sbjct: 821 GEDIPDAAPSGVSVDIVNSTLVKVFWFGIPRDRVRGHLRGYKVSWWKTKSMLDGKRHHPE 880

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNV 608
              L ++ D       + GL+P +++R+ +  Y   GDG ES     V F+ P+ V
Sbjct: 881 KHFLTFVGD--RNYGMIPGLDPFSEFRLTVLAYNSRGDGPESA---PVVFETPEGV 931



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 92/384 (23%), Positives = 155/384 (40%), Gaps = 46/384 (11%)

Query: 55  CIFGGTPLPQTIWSKDGVPIN--PSDRISQGNYGKSLIIKH--VEFSDQGSYTCEVSNGV 110
           C   G P P   W+KDG P +     RI+  N   + +I++  +  + QG Y C  SN +
Sbjct: 57  CEASGNPQPTFNWTKDGKPFDLLSDPRITTRNNSGTFVIQNHGIITNFQGKYRCYASNVL 116

Query: 111 GEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVHNGKPISQ 168
           G A S  I+L V + P F  E  E ++    ++V   C    G+P   I+W++    +  
Sbjct: 117 GTAMSKEIELIVPSVPKFPKEKIEPLDVEHGDSVILHCNPPKGIPPLHIYWMNID--LQH 174

Query: 169 APPNPRRKVG-PNRITIENLRKSDT-GNYGCNAT-----NSLGYVYKDVYVNVLAHA--- 218
            P + R  +     +   N+ ++D+  +Y C A        +  +   + V+   HA   
Sbjct: 175 IPQDERVSMSLKGDLYFANVEENDSRSDYCCFAAFPKLRTIVQKMPMTLKVSRFKHANDS 234

Query: 219 -----------------------PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
                                  PE   +      + G  + L C   G P P ++W+  
Sbjct: 235 GSPNAAVTKANFIKERKPKLLIPPESAGSSSSVTVIKGGVLQLECIAEGLPTPHLSWVKV 294

Query: 256 QKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
            + L   +    + G  LKI +V+ AD G Y C A N +G A+    + V+E      +P
Sbjct: 295 TENLPKDKPVTDKFGKVLKIENVSAADEGTYQCTASNPVGRAKHEFHVHVEEPPRWIKEP 354

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
                  G++    C A+ +P  + +I W     PID  S     + +D  L++T     
Sbjct: 355 RGGVYSLGENLLLLCEAIGNP--EPTIQWKLNGMPID--SRTFRGRISDGELSLTNLQLQ 410

Query: 375 DSGQYTCRAQTELDFIEAQATLTV 398
           D+  Y C A  +   + A A + V
Sbjct: 411 DTAVYHCEASNKHGTLLASANVNV 434



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 78/186 (41%), Gaps = 9/186 (4%)

Query: 113 AKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPEPEIHWVHNGKP---ISQ 168
           A +  I LSV   P    + E  +    +E  T +C+ASG P+P  +W  +GKP   +S 
Sbjct: 22  AAAIEIPLSVAQLPTIKEQSETQVAYPFDENFTIKCEASGNPQPTFNWTKDGKPFDLLSD 81

Query: 169 APPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
                R   G   I    +  +  G Y C A+N LG         ++   P+  +   + 
Sbjct: 82  PRITTRNNSGTFVIQNHGIITNFQGKYRCYASNVLGTAMSKEIELIVPSVPKFPKEKIEP 141

Query: 229 YTVD-GKTVVLTCR-VFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS-G 283
             V+ G +V+L C    G P   + W  I  Q      R ++   GDL   +V   DS  
Sbjct: 142 LDVEHGDSVILHCNPPKGIPPLHIYWMNIDLQHIPQDERVSMSLKGDLYFANVEENDSRS 201

Query: 284 EYTCFA 289
           +Y CFA
Sbjct: 202 DYCCFA 207


>gi|197097634|ref|NP_001124558.1| contactin-6 precursor [Pongo abelii]
 gi|55731108|emb|CAH92269.1| hypothetical protein [Pongo abelii]
 gi|55731947|emb|CAH92682.1| hypothetical protein [Pongo abelii]
          Length = 1028

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 179/715 (25%), Positives = 301/715 (42%), Gaps = 76/715 (10%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    + S+      L I + +  D+G Y 
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQ--AILEIPNFQQEDEGFYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C  SN  G   +    L   A P +  + +    +  + + +ECKASG P P   W+ NG
Sbjct: 297 CIASNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDNLLWECKASGKPNPWYTWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++   P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 356 ERLN---PEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSK 412

Query: 224 AP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
           +P  K  +   G  +V+ C+    P+  ++W    + L    R  +LE G LKI ++  +
Sbjct: 413 SPVKKKSFVQVGGDIVIECKPNAFPRAAISWKRGTETLRQSKRIFLLEDGSLKIYNITRS 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ GT + +GSL VKE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 473 DAGSYTCIATNQFGTTKNTGSLIVKERTVITVPPSKMDVTVGESIVLPCQVSHDPSIEVV 532

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            VW    + ID +       R    +   L +       SG+Y C  QT L+ + A A +
Sbjct: 533 FVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADI 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW    P +     + + +QT T          ++
Sbjct: 593 IVRAPPGPPEDVK-VEDISSTTSQLSWR-AGPDN-NSPIQIFTIQTRTPFSVGWQAVATV 649

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA 512
            E++   G++    V    P  +   RV+A N    G PS+    +  +     V  +  
Sbjct: 650 PEIL--NGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVNI 707

Query: 513 IPLGS--SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
              G   S   + W  +  E  NG   GY I ++ V  T      E++  + + +    +
Sbjct: 708 NGGGGSRSELVITWESIPEELQNGEGFGYIIMFRPVGSTTWSK--EKVSSV-ESSRFVYR 764

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS-----TPNNLVISWT 623
              + P + + + +  Y   G+G+ S        ++   +  RG+     + + + +SW 
Sbjct: 765 NESIIPLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEVSWN 824

Query: 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWT 683
           A+                       AWN       R +  VL        YE   V  WT
Sbjct: 825 AI-----------------------AWN-------RNTGRVLG-------YE---VLYWT 844

Query: 684 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           +   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S  ++  T
Sbjct: 845 DDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGTGPSSPPVNVTT 898



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 167/666 (25%), Positives = 258/666 (38%), Gaps = 99/666 (14%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC ++N   EA+      SV   P   V+                
Sbjct: 180 NLYIAKVEPSDVGNYTCFITNK--EAQR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 232

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ +V  EC A G P P+I W   +G P+   P   +       + I N ++
Sbjct: 233 FPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPL---PGKVKYSKSQAILEIPNFQQ 289

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A+N  G       + +    PE  +  ++ Y      ++  C+  G P P 
Sbjct: 290 EDEGFYECIASNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDNLLWECKASGKPNPW 348

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L       +E G L IT +  +DSG Y C A NK      +  L V     
Sbjct: 349 YTWLKNGERLNPEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAP 408

Query: 309 HITDQPEDYE--VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P   +  V+ G      C   + P  + +I W RG+E +      R     D SL
Sbjct: 409 DFSKSPVKKKSFVQVGGDIVIECKPNAFP--RAAISWKRGTETL--RQSKRIFLLEDGSL 464

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV------ 420
            +   +  D+G YTC A  +    +   +L V+         T+I V  +K  V      
Sbjct: 465 KIYNITRSDAGSYTCIATNQFGTTKNTGSLIVK-------ERTVITVPPSKMDVTVGESI 517

Query: 421 -----VSWNPVSPQSLRGHFRGYKV----------QTWTEKDGEGSIRELIVNKGESTTT 465
                VS +P         F G  +          +   E  G+  IR + +N       
Sbjct: 518 VLPCQVSHDPSIEVVFVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLC 577

Query: 466 EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSL--EAIPLGSSAFYLK 523
            V   + +    A ++    A  GPP +    V  E +  T   L   A P  +S   + 
Sbjct: 578 TVQTTLESLSAVADIIV--RAPPGPPED----VKVEDISSTTSQLSWRAGPDNNSPIQIF 631

Query: 524 WVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            ++   P      + + +Q+V           +P I +  T +A + GL P  +Y   + 
Sbjct: 632 TIQTRTP------FSVGWQAVA---------TVPEILNGKTYNATVVGLSPWVEYEFRVV 676

Query: 584 GYTKAGDGAESK------YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKY 637
                G G  SK          VP   P N+ G G + + LVI+W ++PE   N   F Y
Sbjct: 677 AGNSIGIGEPSKPSELLRTKASVPVVAPVNINGGGGSRSELVITWESIPEELQNGEGFGY 736

Query: 638 RIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL- 694
            I +R   +   W+++ V     S  V  N+      P+E+KV       +GEGS+  + 
Sbjct: 737 IIMFRPVGS-TTWSKEKVSSVESSRFVYRNESIIPLSPFEVKV--GVYNNEGEGSLSTVT 793

Query: 695 IVNKGE 700
           IV  GE
Sbjct: 794 IVYSGE 799



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 151/640 (23%), Positives = 246/640 (38%), Gaps = 83/640 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +NP +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 339 CKASGKPNPWYTWLKNGERLNPEERIQIEN--GTLIITMLNVSDSGVYQCAAENKY-QII 395

Query: 115 SYSIDLSVLA-APYFTVEP----EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
             + +L VLA AP F+  P     F+    +  +  ECK +  P   I W    + + Q+
Sbjct: 396 YANAELRVLASAPDFSKSPVKKKSFVQVGGD--IVIECKPNAFPRAAISWKRGTETLRQS 453

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
                 + G   + I N+ +SD G+Y C ATN  G   K+    ++     IT  P    
Sbjct: 454 KRIFLLEDG--SLKIYNITRSDAGSYTCIATNQFGTT-KNTGSLIVKERTVITVPPSKMD 510

Query: 230 TVDGKTVVLTCRVFGAPKPEVN--WIHN-----------QKELTGGRYTILETGDLKITD 276
              G+++VL C+V   P  EV   W  N             E  GG       GDL I +
Sbjct: 511 VTVGESIVLPCQVSHDPSIEVVFVWFFNGDVIDLKKGVAHFERIGGE----SVGDLMIRN 566

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSD 334
           +    SG+Y C  +  L +      + V+        PED +VE   S T + +  A  D
Sbjct: 567 IQLNHSGKYLCTVQTTLESLSAVADIIVRAPP---GPPEDVKVEDISSTTSQLSWRAGPD 623

Query: 335 PSLKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            +  + I  ++   P         + P  +    Y+ TV   S     ++   A   +  
Sbjct: 624 NNSPIQIFTIQTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGI 683

Query: 390 IEAQA-----TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ--- 441
            E             VP+ AP N          + V++W  +  +   G   GY +    
Sbjct: 684 GEPSKPSELLRTKASVPVVAPVNINGGGG-SRSELVITWESIPEELQNGEGFGYIIMFRP 742

Query: 442 ----TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
               TW+++          V + ES        +P S    +V  +N    G  S +   
Sbjct: 743 VGSTTWSKEKVSSVESSRFVYRNES-------IIPLSPFEVKVGVYNNEGEGSLSTVTIV 795

Query: 498 VTPEGVP------GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKV 549
            + E  P       +VQS  A  +  S   + W    +  G ++GY++ Y     K + +
Sbjct: 796 YSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDSKESMI 852

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKN 604
           G +      +S   TT   + GL+ +T Y   +  Y  AG G  S  +        P + 
Sbjct: 853 GKI-----RVSGNVTTK-NITGLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQP 906

Query: 605 PDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           P N+  +  T + L ++W  +  +E+ +    Y+I +R++
Sbjct: 907 PANIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQN 945



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 135/380 (35%), Gaps = 44/380 (11%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK--HVEFSDQGSYT 103
           L   +V L C   G P P   W ++G  I+ +        G SL I   H +  D G Y 
Sbjct: 41  LSKSEVILNCAANGYPSPHYRWKQNGTDIDFTMSYHYRLDGGSLAISSPHTD-QDIGMYQ 99

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPEI----- 157
           C  +N +G   S    L       F T     ++  E + V   C     P P       
Sbjct: 100 CLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCG----PPPHFGDLSY 155

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY---------- 205
            W  N  P+     N RR V      + I  +  SD GNY C  TN              
Sbjct: 156 AWTFNDNPLYVQEDN-RRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPPTPL 214

Query: 206 ------VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKE 258
                 V  +    +    PE  +A KD       +V L C   G P P+++W   +   
Sbjct: 215 VQRTDGVMGEYEPKIEVRFPETIQAAKD------SSVKLECFALGNPVPDISWRRLDGSP 268

Query: 259 LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYE 318
           L G          L+I +    D G Y C A N  G     G L          + ++  
Sbjct: 269 LPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPPEWEQKIQNTY 328

Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQ 378
           +    +  + C A   P+   +  WL+  E ++ E     +Q  + +L +T  +  DSG 
Sbjct: 329 LSIYDNLLWECKASGKPNPWYT--WLKNGERLNPEER---IQIENGTLIITMLNVSDSGV 383

Query: 379 YTCRAQTELDFIEAQATLTV 398
           Y C A+ +   I A A L V
Sbjct: 384 YQCAAENKYQIIYANAELRV 403



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 105/286 (36%), Gaps = 32/286 (11%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L+ P FT EP    F     +  V   C A+G P P   W  NG  I        R  G
Sbjct: 22  LLSRPIFTQEPHDIIFPLDLSKSEVILNCAANGYPSPHYRWKQNGTDIDFTMSYHYRLDG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            +          D G Y C ATN LG +         A+  +     +   +V +G+ VV
Sbjct: 82  GSLAISSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        W  N   L       R+   ETG+L I  V  +D G YTCF
Sbjct: 142 LLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCF 197

Query: 289 ARNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSL 337
             NK    + QG  +  V+    +  +         PE  +     S    C A+ +P  
Sbjct: 198 ITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            +S   L GS       + ++ +S    L +    + D G Y C A
Sbjct: 258 DISWRRLDGSP---LPGKVKYSKSQAI-LEIPNFQQEDEGFYECIA 299



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 14/190 (7%)

Query: 409 TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
           T +Q   A +  VSWN ++     G   GY+V  WT+   E  I ++ V+ G  TT  + 
Sbjct: 809 TSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVS-GNVTTKNIT 867

Query: 469 KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VK 526
                +  FA V A+N A  GP S  ++  T +  P    +  A  L +S   L W  VK
Sbjct: 868 GLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLTNSKLCLNWEHVK 927

Query: 527 PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGY 585
             +    ++GYKI Y+  + +K         ++ +   TSA+L  L P    Y I +   
Sbjct: 928 TMENESEVLGYKILYRQNRQSKT--------HVLETNNTSAEL--LVPFEEDYLIEIRTV 977

Query: 586 TKAGDGAESK 595
           +  GDG+ S+
Sbjct: 978 SDGGDGSSSE 987


>gi|449274452|gb|EMC83604.1| Neural cell adhesion molecule L1-like protein, partial [Columba
           livia]
          Length = 1211

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 230/503 (45%), Gaps = 24/503 (4%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
           L CI  G P P   W K    + P D     N+GK L I+    +D+G+Y C  SN +G 
Sbjct: 263 LECIAEGLPTPHLSWVKLTGNL-PRDEPETENFGKILKIEQATAADEGTYQCTASNPMGR 321

Query: 113 AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPN 172
           AK +   + V   P +  EPE    +    +   C+A G PEP I W  NG PI      
Sbjct: 322 AK-HEFHVHVEEPPQWIKEPEGGVYSIGTNLVLLCEAIGNPEPTIQWKLNGAPIDSR--T 378

Query: 173 PRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TV 231
            R ++    I++ NL+  D+  Y C A+N  G +     VNVL  AP I  +  + Y TV
Sbjct: 379 FRGRISAREISLTNLQLQDSAVYQCEASNKHGTILATANVNVLNIAPLILTSDGENYATV 438

Query: 232 DGKTVVLTCRVFGAPKPEVNWIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYTCFA 289
            G +  L C +F +P  ++ W  ++  + L   RY + + G L+I +    D+G Y C+A
Sbjct: 439 VGYSAFLHCEIFASPAADIRWTKDESIEPLLTSRYELNKNGTLEIKETKKEDTGSYACWA 498

Query: 290 RNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS--IVWLRGS 347
            N +G    + +L +++ T +   P++  V    S   +C +  D  LK S  + W +  
Sbjct: 499 ANSVGKRAITANLDIRDATKLVVTPKNPRVLKSHSVLLKCQSEYDSHLKHSFRLSWRKDG 558

Query: 348 E--PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAP 405
           +  P++   + R +   D +L ++  +  D G YTC A+T LD + A++ L V   L+ P
Sbjct: 559 DELPVNSTEDGRIILDKD-TLFISSVTLKDQGVYTCVARTSLDSVTAESQLVV---LDVP 614

Query: 406 SNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTT 465
                +Q+ + +   V  +  +  S         ++   ++   G  +EL    G  TT 
Sbjct: 615 DPPEDLQLSENQNRSVRLSWKAGASHNSPINELIIEFEEDRWEPGRWQELTRAPGNDTTV 674

Query: 466 EVDKFVPASKNFARVLAFNGAYNGPPSE-IISFVTPEGVPGTVQSLEAIPLGSS---AFY 521
            +    P      RV++ N      PS+  + + TP   P   ++ E I + +S      
Sbjct: 675 LL-SLAPYMNYQFRVVSVNAVGRSQPSKPSLRYATPPAAPD--KNPENIRVEASEPDEMV 731

Query: 522 LKW--VKPEQPNGVLMGYKIKYQ 542
           +KW  +KP + NG  + YK+ ++
Sbjct: 732 MKWEPLKPMERNGPGLEYKVSWR 754



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 150/589 (25%), Positives = 235/589 (39%), Gaps = 75/589 (12%)

Query: 126 PYFTVEPEFINAAEEETVT------FECKASGLPEPEIHWVHNGKPISQAPPN-PRRKVG 178
           P   + PE   ++   TV        EC A GLP P + WV   K     P + P  +  
Sbjct: 238 PKLLIPPESAGSSSSVTVIKGGVLLLECIAEGLPTPHLSWV---KLTGNLPRDEPETENF 294

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVL 238
              + IE    +D G Y C A+N +G    + +V+V    P+  + P+      G  +VL
Sbjct: 295 GKILKIEQATAADEGTYQCTASNPMGRAKHEFHVHV-EEPPQWIKEPEGGVYSIGTNLVL 353

Query: 239 TCRVFGAPKPEVNWIHNQKELTG----GRYTILETGDLKITDVAFADSGEYTCFARNKLG 294
            C   G P+P + W  N   +      GR +  E   + +T++   DS  Y C A NK G
Sbjct: 354 LCEAIGNPEPTIQWKLNGAPIDSRTFRGRISARE---ISLTNLQLQDSAVYQCEASNKHG 410

Query: 295 TAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDF 352
           T   + ++ V     +  T   E+Y    G SA   C   + P+    I W +  E I+ 
Sbjct: 411 TILATANVNVLNIAPLILTSDGENYATVVGYSAFLHCEIFASPAA--DIRWTK-DESIEP 467

Query: 353 ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ 412
               R+  + + +L + ++ + D+G Y C A   +      A L ++             
Sbjct: 468 LLTSRYELNKNGTLEIKETKKEDTGSYACWAANSVGKRAITANLDIR------------- 514

Query: 413 VIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR--------ELIVNKGESTT 464
             DA K VV+  P +P+ L+ H    K Q+  +   + S R        EL VN  E   
Sbjct: 515 --DATKLVVT--PKNPRVLKSHSVLLKCQSEYDSHLKHSFRLSWRKDGDELPVNSTEDGR 570

Query: 465 TEVDK---FVPASKNFARVLAFNGAYNGPPSEIISFVTPEG------VPGTVQSLEAIPL 515
             +DK   F+ +       L   G Y       +  VT E       VP   + L+    
Sbjct: 571 IILDKDTLFISSV-----TLKDQGVYTCVARTSLDSVTAESQLVVLDVPDPPEDLQLSEN 625

Query: 516 GSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
            + +  L W      N  +    I+++  +  + G   E       P   +  L  L P 
Sbjct: 626 QNRSVRLSWKAGASHNSPINELIIEFEEDRW-EPGRWQE---LTRAPGNDTTVLLSLAPY 681

Query: 576 TKYRIHLAGYTKAGDGAESK-YLFYV-----PFKNPDNVEGRGSTPNNLVISWTAMPEIE 629
             Y+  +      G    SK  L Y      P KNP+N+    S P+ +V+ W  +  +E
Sbjct: 682 MNYQFRVVSVNAVGRSQPSKPSLRYATPPAAPDKNPENIRVEASEPDEMVMKWEPLKPME 741

Query: 630 HNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            N P  +Y++ WR+      WN++ V   ++  L L N PTF PYEIKV
Sbjct: 742 RNGPGLEYKVSWRQRGVEADWNEETV---KKHSLTLRNTPTFVPYEIKV 787



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 136/589 (23%), Positives = 239/589 (40%), Gaps = 57/589 (9%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY-GKSLIIKHVEFSDQGSYTCEVSNGVG 111
           L C   G P P   W  +G PI+   R  +G    + + + +++  D   Y CE SN  G
Sbjct: 353 LLCEAIGNPEPTIQWKLNGAPID--SRTFRGRISAREISLTNLQLQDSAVYQCEASNKHG 410

Query: 112 E-AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG--KPISQ 168
               + ++++  +A    T + E        +    C+    P  +I W  +   +P+  
Sbjct: 411 TILATANVNVLNIAPLILTSDGENYATVVGYSAFLHCEIFASPAADIRWTKDESIEPLLT 470

Query: 169 APPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPEITEAPK 226
           +    R ++  N  + I+  +K DTG+Y C A NS+G   + +  N+ +  A ++   PK
Sbjct: 471 S----RYELNKNGTLEIKETKKEDTGSYACWAANSVGK--RAITANLDIRDATKLVVTPK 524

Query: 227 DEYTVDGKTVVLTCRV----FGAPKPEVNWIHNQKEL----TGGRYTILETGDLKITDVA 278
           +   +   +V+L C+            ++W  +  EL    T     IL+   L I+ V 
Sbjct: 525 NPRVLKSHSVLLKCQSEYDSHLKHSFRLSWRKDGDELPVNSTEDGRIILDKDTLFISSVT 584

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
             D G YTC AR  L +      L V +   + D PED ++   Q+ + R +  +  S  
Sbjct: 585 LKDQGVYTCVARTSLDSVTAESQLVVLD---VPDPPEDLQLSENQNRSVRLSWKAGASHN 641

Query: 339 LSIVWLRGSEPIDFES---EPRFVQ------SNDYSLTVTKSSELDSGQYTCRAQTELDF 389
             I  L     I+FE    EP   Q       ND ++ ++ +  ++              
Sbjct: 642 SPINELI----IEFEEDRWEPGRWQELTRAPGNDTTVLLSLAPYMNYQFRVVSVNAVGRS 697

Query: 390 IEAQATLTVQVPLEAPSNF---TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
             ++ +L    P  AP        ++  +  + V+ W P+ P    G    YKV +W ++
Sbjct: 698 QPSKPSLRYATPPAAPDKNPENIRVEASEPDEMVMKWEPLKPMERNGPGLEYKV-SWRQR 756

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGT 506
             E    E  V K   T      FVP      +V A N   +GP   +    + E +P  
Sbjct: 757 GVEADWNEETVKKHSLTLRNTPTFVPYE---IKVQAVNNLGSGPEPNVTIGYSGEDIPDA 813

Query: 507 VQSLEAIPL-GSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK----GTKVGPLLERLPYI 559
             S  ++ +  S+   + W  +  ++  G L GYK+ +   K    G +  P  + L ++
Sbjct: 814 APSDVSVDIVNSTLVKVFWFGIPKDRVRGHLRGYKVNWWKTKSMLDGKRHHPEKQFLTFV 873

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNV 608
            D       + GLE  +++R+ +  Y   GDG ES  +    F+ P+ V
Sbjct: 874 GD--RNYGMIPGLEAFSEFRLTVLAYNSKGDGPESSPIV---FETPEGV 917



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 139/574 (24%), Positives = 244/574 (42%), Gaps = 49/574 (8%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPINP--SDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L C    +P     W+KD   I P  + R      G +L IK  +  D GSY C  +N V
Sbjct: 445  LHCEIFASPAADIRWTKDE-SIEPLLTSRYELNKNG-TLEIKETKKEDTGSYACWAANSV 502

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA---SGLPEP-EIHWVHNGKPI 166
            G+ ++ + +L +  A    V P+     +  +V  +C++   S L     + W  +G  +
Sbjct: 503  GK-RAITANLDIRDATKLVVTPKNPRVLKSHSVLLKCQSEYDSHLKHSFRLSWRKDGDEL 561

Query: 167  S-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
               +  + R  +  + + I ++   D G Y C A  SL  V  +  + VL    ++ + P
Sbjct: 562  PVNSTEDGRIILDKDTLFISSVTLKDQGVYTCVARTSLDSVTAESQLVVL----DVPDPP 617

Query: 226  KDEYTVDG--KTVVLTCRVFGAPKPEVNWI---HNQKELTGGRYTILETGDLKITDVAFA 280
            +D    +   ++V L+ +   +    +N +     +     GR+  L       T V  +
Sbjct: 618  EDLQLSENQNRSVRLSWKAGASHNSPINELIIEFEEDRWEPGRWQELTRAPGNDTTVLLS 677

Query: 281  DSG----EYTCFARNKLGTAQGSG-SLTVKEHTHITDQ-PEDYEVEAGQSAT-------F 327
             +     ++   + N +G +Q S  SL         D+ PE+  VEA +           
Sbjct: 678  LAPYMNYQFRVVSVNAVGRSQPSKPSLRYATPPAAPDKNPENIRVEASEPDEMVMKWEPL 737

Query: 328  RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            +    + P L+  + W +     D+  E        +SLT+  +      +   +A   L
Sbjct: 738  KPMERNGPGLEYKVSWRQRGVEADWNEE----TVKKHSLTLRNTPTFVPYEIKVQAVNNL 793

Query: 388  -DFIEAQATLTV---QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW 443
                E   T+      +P  APS+ + + ++++    V W  +    +RGH RGYKV  W
Sbjct: 794  GSGPEPNVTIGYSGEDIPDAAPSDVS-VDIVNSTLVKVFWFGIPKDRVRGHLRGYKVNWW 852

Query: 444  TEK---DGEGSI--RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
              K   DG+     ++ +   G+     +      S+    VLA+N   +GP S  I F 
Sbjct: 853  KTKSMLDGKRHHPEKQFLTFVGDRNYGMIPGLEAFSEFRLTVLAYNSKGDGPESSPIVFE 912

Query: 499  TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERLP 557
            TPEGVP   + L  +     +  L W  P++ NG L GY ++YQ +  T ++GPL +   
Sbjct: 913  TPEGVPEQPRFLRILNFDKDSVTLSWGLPKKANGHLTGYILQYQMINETHEIGPLNDV-- 970

Query: 558  YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             +++ +T S +L+GL  STKY+ ++   T  G G
Sbjct: 971  SVTNRSTLSWRLSGLSSSTKYKFYVKACTVKGCG 1004



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 91/368 (24%), Positives = 149/368 (40%), Gaps = 30/368 (8%)

Query: 55  CIFGGTPLPQTIWSKDGVPIN--PSDRISQGNYGKSLIIKH--VEFSDQGSYTCEVSNGV 110
           C   G P P   W+KDG P +     RI   N   + ++++  +  S QG Y C  SN +
Sbjct: 59  CEARGNPHPTFNWTKDGKPFDLLSDPRIVASNNSGTFVLQNRGIITSFQGKYRCFASNML 118

Query: 111 GEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVHNGKPISQ 168
           G   S  I+L V + P F  E  E ++    ++V   C    G+P   I+W++    +  
Sbjct: 119 GTTMSEEIELIVPSVPKFPKEKIEPLDVEHGDSVILHCNPPKGIPPLHIYWMNID--LQH 176

Query: 169 APPNPRRKVG-PNRITIENLRKSDT-GNYGCNAT-NSLGYVYKDVYVNV----------- 214
            P + R  +     +   N+ ++D+  +Y C A   +L  + + + + +           
Sbjct: 177 IPQDERVSMSLKGDLYFANVEENDSRSDYCCFAAFPTLRTIVQKMPMTLKVSRSNFIKER 236

Query: 215 ---LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD 271
              L   PE   +      + G  ++L C   G P P ++W+     L          G 
Sbjct: 237 KPKLLIPPESAGSSSSVTVIKGGVLLLECIAEGLPTPHLSWVKLTGNLPRDEPETENFGK 296

Query: 272 -LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN 330
            LKI     AD G Y C A N +G A+    + V+E      +PE      G +    C 
Sbjct: 297 ILKIEQATAADEGTYQCTASNPMGRAKHEFHVHVEEPPQWIKEPEGGVYSIGTNLVLLCE 356

Query: 331 AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
           A+ +P  + +I W     PID  +    + + + SLT  +    DS  Y C A  +   I
Sbjct: 357 AIGNP--EPTIQWKLNGAPIDSRTFRGRISAREISLTNLQLQ--DSAVYQCEASNKHGTI 412

Query: 391 EAQATLTV 398
            A A + V
Sbjct: 413 LATANVNV 420



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 92/387 (23%), Positives = 150/387 (38%), Gaps = 47/387 (12%)

Query: 96  FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPE 154
            S +G   C   + +    +  I LSV+  P  T +P   +    +E  T +C+A G P 
Sbjct: 7   LSTKGIAICLFFSVLNLTAAIEIPLSVVQLPTITEQPRTQVAYPFDEDFTIKCEARGNPH 66

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNRITI----ENLRKSDTGNYGCNATNSLGYVYKDV 210
           P  +W  +GKP      +PR     N  T       +  S  G Y C A+N LG    + 
Sbjct: 67  PTFNWTKDGKPFDLL-SDPRIVASNNSGTFVLQNRGIITSFQGKYRCFASNMLGTTMSEE 125

Query: 211 YVNVLAHAPEITEAPKDEYTVD-GKTVVLTCR-VFGAPKPEVNW--IHNQKELTGGRYTI 266
              ++   P+  +   +   V+ G +V+L C    G P   + W  I  Q      R ++
Sbjct: 126 IELIVPSVPKFPKEKIEPLDVEHGDSVILHCNPPKGIPPLHIYWMNIDLQHIPQDERVSM 185

Query: 267 LETGDLKITDVAFADS-GEYTCFA---------RNKLGTAQGSGSLTVKEHT-HITDQPE 315
              GDL   +V   DS  +Y CFA         +    T + S S  +KE    +   PE
Sbjct: 186 SLKGDLYFANVEENDSRSDYCCFAAFPTLRTIVQKMPMTLKVSRSNFIKERKPKLLIPPE 245

Query: 316 ------DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
                    V  G      C A   P+  LS V L G+ P D   EP   ++    L + 
Sbjct: 246 SAGSSSSVTVIKGGVLLLECIAEGLPTPHLSWVKLTGNLPRD---EPE-TENFGKILKIE 301

Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAP--------SNFTLI-QVIDAK 417
           +++  D G Y C A   +   + +  + V+ P   ++ P        +N  L+ + I   
Sbjct: 302 QATAADEGTYQCTASNPMGRAKHEFHVHVEEPPQWIKEPEGGVYSIGTNLVLLCEAIGNP 361

Query: 418 KAVVSWN----PVSPQSLRGHFRGYKV 440
           +  + W     P+  ++ RG     ++
Sbjct: 362 EPTIQWKLNGAPIDSRTFRGRISAREI 388


>gi|348575281|ref|XP_003473418.1| PREDICTED: LOW QUALITY PROTEIN: contactin-3-like [Cavia porcellus]
          Length = 1019

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 170/632 (26%), Positives = 275/632 (43%), Gaps = 50/632 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P  PS +I    +   L I   +  D GSY 
Sbjct: 230 AAKGATVKLECFALGNPVPQINWRRSDGMPF-PS-KIKLRKFNGVLEIPAFQQEDAGSYE 287

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    + +  A E+++ +EC+ASG P+P   W+ NG
Sbjct: 288 CIAENSRGKNVARG-RLTYYAKPHWVQFIKDMEMAVEDSLYWECRASGKPKPSYRWLKNG 346

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + +       R ++    +TI NL  +D+G + C A N  G +Y    + V+A AP+ ++
Sbjct: 347 EALVL---EERIQIENGALTISNLNVTDSGMFQCIAENKHGLIYSSAELKVVASAPDFSK 403

Query: 224 AP-KDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
            P ++   V  G  V L C+   +P+   +W      +    R + L+ G LKI +V  A
Sbjct: 404 NPMRNLIRVQVGSLVNLDCKPRASPRALCSWKKGDAVVQEHERVSFLKDGGLKIANVTKA 463

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           DSG YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L + 
Sbjct: 464 DSGTYTCTAENQFGKANGTTLLVVTEPTRITLAPSNMDVSVGESIILPCQVKHDPLLDIM 523

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 524 FTWYFNGALTDFKKDGSHFEKVGGSSSGDLMIRNIQLRHSGKYVCMVQTGVDSVSSAAEL 583

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
            V+     P N  + ++ D   A +SW       +PV+  +++       G++  T    
Sbjct: 584 IVRGSPGPPKNVKVDEITDT-TAQLSWREGIDNHSPVTSYAIQARTPFSVGWQTVT---- 638

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 639 ----TVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSFPSEKVRTEEAVPE 692

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S      GS S   + W  V  E  NG   GY + ++ +  T     ++ +    D 
Sbjct: 693 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGITT---WIQTVVTSPDT 749

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y + +  Y   G+G  S    +F     P   P  V     + + 
Sbjct: 750 PRYVFRNESIVPFSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSAHSLSSSE 809

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FWRRHNTGE 648
           + ++W  +P    N     Y + +W  +N GE
Sbjct: 810 IEVAWNTIPWKLSNGHLLGYEVRYW--NNGGE 839



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 157/618 (25%), Positives = 238/618 (38%), Gaps = 48/618 (7%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V  A+       ++           P   V+ PE + AA
Sbjct: 172 LYIAKVEPSDVGNYTCVVTSMVTNARVLGSPTPLMLRSDGVMGEYEPKIEVQFPETLPAA 231

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P    P   + +     + I   ++ D G+Y C
Sbjct: 232 KGATVKLECFALGNPVPQINWRRSDGMPF---PSKIKLRKFNGVLEIPAFQQEDAGSYEC 288

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K+V    L +   P   +  KD       ++   CR  G PKP   W+ N
Sbjct: 289 IAENSRG---KNVARGRLTYYAKPHWVQFIKDMEMAVEDSLYWECRASGKPKPSYRWLKN 345

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
            + L       +E G L I+++   DSG + C A NK G    S  L  V      +  P
Sbjct: 346 GEALVLEERIQIENGALTISNLNVTDSGMFQCIAENKHGLIYSSAELKVVASAPDFSKNP 405

Query: 315 ED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
                 V+ G      C   + P    S  W +G   +       F++  D  L +   +
Sbjct: 406 MRNLIRVQVGSLVNLDCKPRASPRALCS--WKKGDAVVQEHERVSFLK--DGGLKIANVT 461

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQ 429
           + DSG YTC A+ +         L V  P     APSN   + V   +  ++        
Sbjct: 462 KADSGTYTCTAENQFGKANGTTLLVVTEPTRITLAPSN---MDVSVGESIILPCQVKHDP 518

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
            L   F  Y     T+   +GS  E +   G S+   + + +    +   V       + 
Sbjct: 519 LLDIMFTWYFNGALTDFKKDGSHFEKV--GGSSSGDLMIRNIQLRHSGKYVCMVQTGVDS 576

Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
             S     V   G PG  ++++   +  +   L W +    +  +  Y I  Q+     V
Sbjct: 577 VSSAAELIV--RGSPGPPKNVKVDEITDTTAQLSWREGIDNHSPVTSYAI--QARTPFSV 632

Query: 550 G-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPF 602
           G   +  +P + D  T +A +  L P  +Y   +    K G G  S      +    VP 
Sbjct: 633 GWQTVTTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSFPSEKVRTEEAVPE 692

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
             P  V G G + + LVI+W  +PE   N   F Y + +R       W Q  V       
Sbjct: 693 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGI-TTWIQTVVTSPDTPR 751

Query: 663 LVLANQPT--FQPYEIKV 678
            V  N+    F PYE+KV
Sbjct: 752 YVFRNESIVPFSPYEVKV 769



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 147/372 (39%), Gaps = 32/372 (8%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS-DQGSYTCEV 106
           +KK+ L C   G P P   W  +G  I+ S        G +L++ +   S D GSY C  
Sbjct: 34  DKKITLSCEAKGNPSPHYRWQLNGSNIDMSMEHRYKLNGGNLVVFNPNRSWDTGSYQCFA 93

Query: 107 SNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVH 161
           +N +G   S    L       F T     ++  E + V   C   G P    E    W+ 
Sbjct: 94  TNSLGTVVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLC---GPPPHSGELSYAWIF 150

Query: 162 NGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LG-----YVYK 208
           N  P S    + RR V      + I  +  SD GNY C  T+       LG      +  
Sbjct: 151 NEYP-SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSMVTNARVLGSPTPLMLRS 209

Query: 209 DVYVNVLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
           D  +    + P+I  + P+      G TV L C   G P P++NW  +       +  + 
Sbjct: 210 DGVMG--EYEPKIEVQFPETLPAAKGATVKLECFALGNPVPQINWRRSDGMPFPSKIKLR 267

Query: 268 E-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
           +  G L+I      D+G Y C A N  G     G LT     H     +D E+    S  
Sbjct: 268 KFNGVLEIPAFQQEDAGSYECIAENSRGKNVARGRLTYYAKPHWVQFIKDMEMAVEDSLY 327

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + C A   P  K S  WL+  E +  E     +Q  + +LT++  +  DSG + C A+ +
Sbjct: 328 WECRASGKP--KPSYRWLKNGEALVLEER---IQIENGALTISNLNVTDSGMFQCIAENK 382

Query: 387 LDFIEAQATLTV 398
              I + A L V
Sbjct: 383 HGLIYSSAELKV 394



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 124/300 (41%), Gaps = 32/300 (10%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +E++ +T  C+A G P P   W  NG  I  +  +  +  G
Sbjct: 13  LLQGPVFLKEPSNSIFPVDSEDKKITLSCEAKGNPSPHYRWQLNGSNIDMSMEHRYKLNG 72

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N +     R  DTG+Y C ATNSLG V         A+        +   +V +G+ VV
Sbjct: 73  GNLVVFNPNRSWDTGSYQCFATNSLGTVVSREAKLQFAYLENFKTKMRSTVSVREGQGVV 132

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        WI N+     E    R+   ETG L I  V  +D G YTC 
Sbjct: 133 LLC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCV 188

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
             + +  A+  GS   L ++    + +         PE      G +    C A+ +P  
Sbjct: 189 VTSMVTNARVLGSPTPLMLRSDGVMGEYEPKIEVQFPETLPAAKGATVKLECFALGNPVP 248

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +++  W R S+ + F S+ +  + N   L +    + D+G Y C A+       A+  LT
Sbjct: 249 QIN--WRR-SDGMPFPSKIKLRKFNGV-LEIPAFQQEDAGSYECIAENSRGKNVARGRLT 304



 Score = 43.9 bits (102), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 86/216 (39%), Gaps = 16/216 (7%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P  APS  +    + + +  V+WN +  +   GH  GY+V+ W     E S  ++ V  G
Sbjct: 793 PTVAPSQVS-AHSLSSSEIEVAWNTIPWKLSNGHLLGYEVRYWNNGGEEESSSKVKV-AG 850

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
             T+  +         +  V A+N A  GP S  ++  T +  P             S  
Sbjct: 851 NETSARLRGLKSNLAYYTAVRAYNSAGAGPFSATVNATTKKTPPSQPPGNVVWNATDSKV 910

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            L W  VK       + GYK+ Y++     V  L        +   TSA+L  L     Y
Sbjct: 911 LLNWEQVKATPNESEVTGYKVFYRTSSQNSVQVL--------NTNKTSAELL-LPFKEDY 961

Query: 579 RIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGST 614
            I +   T  GDG  S+ +  +P     N++ RGST
Sbjct: 962 IIEVKATTDGGDGTSSEQI-RIP--RITNMDARGST 994


>gi|327266146|ref|XP_003217867.1| PREDICTED: contactin-3-like [Anolis carolinensis]
          Length = 920

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 159/564 (28%), Positives = 249/564 (44%), Gaps = 32/564 (5%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+P+  W + DG P  PS  + + + G  + I + +  D G Y 
Sbjct: 132 AAKGSTVKLECFALGNPVPRINWRRTDGNPF-PSKVMLRKSNGM-IEIPNFQQEDAGLYE 189

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    +   AA E+ + +EC+ASG P+P   W+ NG
Sbjct: 190 CITENSRGKNIARG-RLTYYAKPHWVQLIKDFEAAVEDNLYWECRASGKPKPSYRWLKNG 248

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P++      R ++    + I NL  +D+G Y C A N  G +Y    + V+A AP+ ++
Sbjct: 249 DPLTI---EGRIQIENGALIITNLNLTDSGIYQCVAENKHGTIYSSADLRVVASAPDFSK 305

Query: 224 APKDEYT--VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
            P  +    + G T    C+   +P+  + W    + L    R ++L+ G L+I +V+ +
Sbjct: 306 NPMKKLLQLLMGSTAHFECKPKASPRAMITWKKGGELLQENERISLLKDGGLRIANVSKS 365

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A  S SL V E T IT  P + +V  G+S    C    DP L +S
Sbjct: 366 DAGSYTCLAENQFGKASSSTSLLVTEPTRITLAPSNMDVTVGESVILPCQVQHDPLLDVS 425

Query: 341 IVWLRGSEPIDFESEP----RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W   S   DF  +     R   S    L +       SG+Y C  +TE+D + + A L
Sbjct: 426 FTWYFNSALTDFRKDASHFERVGGSASGDLMIRNIQLKHSGKYVCTVKTEVDSVSSAAEL 485

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKD-GEGSIR 453
            V+     P N   +  I A  A +SW     + L  H    GY VQ  T    G   + 
Sbjct: 486 IVRGSPGPPENVK-VDEITATTAWLSWY----EGLDNHSPVTGYTVQARTPFSVGWQRVT 540

Query: 454 EL--IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSL 510
            +  +++    T T VD   P  +   R++A N    G PS     V T E VP    S 
Sbjct: 541 TVPEVIDGKTFTATAVD-LNPWVEYEFRIVASNKIGGGEPSLPSEKVRTKEAVPEVPPSE 599

Query: 511 EAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSA 567
            +   GS S   + W  V  E  NG   GY + ++ +    V   ++ +    D      
Sbjct: 600 VSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPL---GVSTWIQTVVTSPDTPRYVF 656

Query: 568 KLAGLEPSTKYRIHLAGYTKAGDG 591
           +   + P + Y + +  Y   G+G
Sbjct: 657 RNESILPFSPYEVKVGVYNNKGEG 680



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 165/638 (25%), Positives = 249/638 (39%), Gaps = 88/638 (13%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V  + S      ++           P   V+ PE + AA
Sbjct: 74  LYIAKVESSDVGNYTCVVTSTVTNSHSLGSPTPLVLRTDGVMGEYEPKIEVQFPETLPAA 133

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P I+W   +G P    P     +     I I N ++ D G Y C
Sbjct: 134 KGSTVKLECFALGNPVPRINWRRTDGNPF---PSKVMLRKSNGMIEIPNFQQEDAGLYEC 190

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
              NS G   K++    L +   P   +  KD        +   CR  G PKP   W+ N
Sbjct: 191 ITENSRG---KNIARGRLTYYAKPHWVQLIKDFEAAVEDNLYWECRASGKPKPSYRWLKN 247

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
              LT      +E G L IT++   DSG Y C A NK GT   S  L  V      +  P
Sbjct: 248 GDPLTIEGRIQIENGALIITNLNLTDSGIYQCVAENKHGTIYSSADLRVVASAPDFSKNP 307

Query: 315 ED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
                ++  G +A F C   + P  +  I W +G E +  +   R     D  L +   S
Sbjct: 308 MKKLLQLLMGSTAHFECKPKASP--RAMITWKKGGELL--QENERISLLKDGGLRIANVS 363

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAV----VSWNP 425
           + D+G YTC A+ +     +  +L V  P     APSN   + V   +  +    V  +P
Sbjct: 364 KSDAGSYTCLAENQFGKASSSTSLLVTEPTRITLAPSN---MDVTVGESVILPCQVQHDP 420

Query: 426 VSPQSLRGHFRG-----YKVQTWTEKDGEGSIRELIVNKGE---------STTTEVDKFV 471
           +   S   +F        K  +  E+ G  +  +L++   +         +  TEVD   
Sbjct: 421 LLDVSFTWYFNSALTDFRKDASHFERVGGSASGDLMIRNIQLKHSGKYVCTVKTEVDSVS 480

Query: 472 PASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPN 531
            A++   R                      G PG  ++++   + ++  +L W +    +
Sbjct: 481 SAAELIVR----------------------GSPGPPENVKVDEITATTAWLSWYEGLDNH 518

Query: 532 GVLMGYKIKYQ---SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
             + GY ++ +   SV   +V      +P + D  T +A    L P  +Y   +    K 
Sbjct: 519 SPVTGYTVQARTPFSVGWQRV----TTVPEVIDGKTFTATAVDLNPWVEYEFRIVASNKI 574

Query: 589 GDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G G  S      +    VP   P  V G G + + LVI+W  +PE   N   F Y + +R
Sbjct: 575 GGGEPSLPSEKVRTKEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFR 634

Query: 643 RHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
                  W Q  V        V  N+    F PYE+KV
Sbjct: 635 PLGV-STWIQTVVTSPDTPRYVFRNESILPFSPYEVKV 671



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 167/692 (24%), Positives = 266/692 (38%), Gaps = 106/692 (15%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G P+    RI   N   +LII ++  +D G Y C   N  G   
Sbjct: 232 CRASGKPKPSYRWLKNGDPLTIEGRIQIEN--GALIITNLNLTDSGIYQCVAENKHGTIY 289

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           S S DL V+A AP F+  P  + +      T  FECK    P   I W   G+ + +   
Sbjct: 290 S-SADLRVVASAPDFSKNPMKKLLQLLMGSTAHFECKPKASPRAMITWKKGGELLQENER 348

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
               K G  RI   N+ KSD G+Y C A N  G       + ++     IT AP +    
Sbjct: 349 ISLLKDGGLRIA--NVSKSDAGSYTCLAENQFGKASSSTSL-LVTEPTRITLAPSNMDVT 405

Query: 232 DGKTVVLTCRVFGAPKPEVN--WIHNQK-----------ELTGGRYTILETGDLKITDVA 278
            G++V+L C+V   P  +V+  W  N             E  GG      +GDL I ++ 
Sbjct: 406 VGESVILPCQVQHDPLLDVSFTWYFNSALTDFRKDASHFERVGGS----ASGDLMIRNIQ 461

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
              SG+Y C  + ++ +   +  L V+        PE+ +V+   + T            
Sbjct: 462 LKHSGKYVCTVKTEVDSVSSAAELIVRGSP---GPPENVKVDEITATT------------ 506

Query: 339 LSIVWLRGSEPIDFES-------EPRFVQSNDYSLTVTKSSELDSGQYTCRA-----QTE 386
               WL   E +D  S       + R   S  +    T    +D   +T  A       E
Sbjct: 507 ---AWLSWYEGLDNHSPVTGYTVQARTPFSVGWQRVTTVPEVIDGKTFTATAVDLNPWVE 563

Query: 387 LDF--------------IEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
            +F              + ++   T +   E P +          + V++W+PV  +   
Sbjct: 564 YEFRIVASNKIGGGEPSLPSEKVRTKEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQN 623

Query: 433 GH-------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNG 485
           G        FR   V TW +           V + ES        +P S    +V  +N 
Sbjct: 624 GEGFGYVVAFRPLGVSTWIQTVVTSPDTPRYVFRNES-------ILPFSPYEVKVGVYNN 676

Query: 486 AYNGPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQ 542
              GP S + +  + E  P      + A  L SS   + W+    +  +G L+GY+++Y 
Sbjct: 677 KGEGPFSSVATVYSAEEEPTVAPSGVAASSLSSSVIEVSWISIPWKMSSGRLLGYEVRYW 736

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-- 600
           +  G +      R+  I +   TS ++ GL+ +  Y   +  Y  AG G  S  +     
Sbjct: 737 NNGGKEQSS--NRVKAIGN--ETSVRITGLKSNLVYFTAVRAYNSAGAGPFSATVNATTK 792

Query: 601 ---PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVL- 656
              P + P N+    S  + +V++W  +  +E+ +    Y++ +R  N     NQ  VL 
Sbjct: 793 KTPPSQPPGNIVWNVSD-SRVVLNWEQVHAMENESEVIGYKVLYRTSNQ----NQLSVLI 847

Query: 657 -DWRQSELVLANQPTFQPYEIKVVQTWTEKDG 687
            +   +EL+L   P    Y I+V       DG
Sbjct: 848 TNRTSAELLL---PLNDDYIIEVKAATDGGDG 876


>gi|344276063|ref|XP_003409829.1| PREDICTED: contactin-4 [Loxodonta africana]
          Length = 1004

 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 166/637 (26%), Positives = 267/637 (41%), Gaps = 60/637 (9%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+P  IW + DG PI    R  + N    L I + +  D G Y 
Sbjct: 216 AAKGTTVKLECFALGNPVPTIIWRRVDGKPIARKARRHKSN--GILEIPNFQQEDAGLYE 273

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P +  +   I+ A EE V +ECKA+G P+P   W+ NG
Sbjct: 274 CVAENSRGKNVAKG-QLTFYAQPNWIQKINDIHVAIEENVFWECKANGRPKPTYRWLKNG 332

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           +P+       R ++    + +  +  SD G Y C A N  G ++    ++V+A  P+ + 
Sbjct: 333 EPLLT---QDRIQIEQGMLNMTTVNLSDAGMYQCVAENKHGVIFASAELSVIAVGPDFSR 389

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
                 T+   G  V++ C+   +PKP   W   +  +    R  + E G L+I +V  +
Sbjct: 390 TLLKRVTLVKVGGEVIIECKPKASPKPVYTWKKGRDIVRENERIIVSEDGSLRIINVTKS 449

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N  GTA  +G+L VK+ T +   P   +V  G+S    C    D SL + 
Sbjct: 450 DAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIV 509

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W      IDF  +     R    +   L +       +G+Y C  QT +D + A A L
Sbjct: 510 FTWTFNGRLIDFNKDGDHFERVGGDSAGDLMIRNIQLKHAGKYVCLVQTSVDKLSAAADL 569

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DG 448
            V+ P   P   ++ ++ D   A +SW P     SP ++      Y +Q  T        
Sbjct: 570 IVRGPPGPPEAVSIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFSVGWQA 622

Query: 449 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVT 499
             ++ ELI   G++ T  V    P  +   R +A N    G PS         E +  VT
Sbjct: 623 VNTVPELI--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVT 680

Query: 500 PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLP 557
           P  V G   S        S   + W  V  E  NG   GY + ++   G K    ++ + 
Sbjct: 681 PANVSGGGGS-------KSELVITWETVPEELQNGGGFGYVVAFRPY-GKK--SWMKTVM 730

Query: 558 YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRG 612
             +D +    +   L P + + + +  +   G+G  S           P K P ++  R 
Sbjct: 731 ASADASRYVFRNESLSPFSPFEVKVGVFNNKGEGLFSPITTVYSAEEEPTKPPPSIFARS 790

Query: 613 STPNNLVISWTAMPEIEHNAPHFK-YRIFWRRHNTGE 648
            +  ++ + W +   +E N    + Y + + RH+  E
Sbjct: 791 LSATDIEVFWAS--PLEKNIGRIQGYEVKYWRHDDKE 825



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 166/643 (25%), Positives = 244/643 (37%), Gaps = 96/643 (14%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V+N V   K       ++           P   V+ PE + A
Sbjct: 157 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPA 216

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TV  EC A G P P I W   +GKPI++     RR      + I N ++ D G Y 
Sbjct: 217 AKGTTVKLECFALGNPVPTIIWRRVDGKPIAR---KARRHKSNGILEIPNFQQEDAGLYE 273

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       +   A  P   +   D +    + V   C+  G PKP   W+ N 
Sbjct: 274 CVAENSRGKNVAKGQLTFYAQ-PNWIQKINDIHVAIEENVFWECKANGRPKPTYRWLKNG 332

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
           + L       +E G L +T V  +D+G Y C A NK G    S  L+V     I   P+ 
Sbjct: 333 EPLLTQDRIQIEQGMLNMTTVNLSDAGMYQCVAENKHGVIFASAELSV-----IAVGPDF 387

Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
                     V+ G      C   + P  K    W +G + I  E+E R + S D SL +
Sbjct: 388 SRTLLKRVTLVKVGGEVIIECKPKASP--KPVYTWKKGRD-IVRENE-RIIVSEDGSLRI 443

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
              ++ D+G YTC A        +   L V+ P       + + V   +  V+       
Sbjct: 444 INVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHD 503

Query: 429 QSLRGHFRGYKVQTWT---------------EKDGEGSIRELIVNKGE---------STT 464
            SL   F      TWT               E+ G  S  +L++   +            
Sbjct: 504 HSLDIVF------TWTFNGRLIDFNKDGDHFERVGGDSAGDLMIRNIQLKHAGKYVCLVQ 557

Query: 465 TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLK 523
           T VDK   A+    R         GPP    +    E    T Q S    P   S   + 
Sbjct: 558 TSVDKLSAAADLIVR---------GPPGPPEAVSIDEITDTTAQLSWRPGPDNHSPITMY 608

Query: 524 WVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
            ++   P      + + +Q+V           +P + D  T +A + GL P  +Y     
Sbjct: 609 VIQARTP------FSVGWQAVN---------TVPELIDGKTFTATVVGLNPWVEYEFRTV 653

Query: 584 GYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKY 637
                G G  S      +    +P   P NV G G + + LVI+W  +PE   N   F Y
Sbjct: 654 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGGGFGY 713

Query: 638 RIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
            + +R +   ++W +  +     S  V  N+    F P+E+KV
Sbjct: 714 VVAFRPYGK-KSWMKTVMASADASRYVFRNESLSPFSPFEVKV 755



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 142/369 (38%), Gaps = 30/369 (8%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
           KKV L C   G P P   W  +G  ++            SL+I +  +  D G+Y C  +
Sbjct: 23  KKVRLSCEVKGNPKPHIRWKLNGTVVDIGMDFRYSVVEGSLLINNPNKTQDAGTYQCIAT 82

Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVHN 162
           N  G   S    L       F T     ++  + + +   C   G P    E    W+ N
Sbjct: 83  NSFGTIVSREAKLQFAYLENFKTRTRSTVSVRQGQGMVLLC---GPPPHAGELSYAWIFN 139

Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN- 213
             P  Q   + RR V      + I  + KSD GNY C  TN+      LG     +  N 
Sbjct: 140 EYPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRND 196

Query: 214 --VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILET 269
             +  + P+I  + P+      G TV L C   G P P + W   + K +          
Sbjct: 197 GVMGEYEPKIEVQFPETVPAAKGTTVKLECFALGNPVPTIIWRRVDGKPIARKARRHKSN 256

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I +    D+G Y C A N  G     G LT     +   +  D  V   ++  + C
Sbjct: 257 GILEIPNFQQEDAGLYECVAENSRGKNVAKGQLTFYAQPNWIQKINDIHVAIEENVFWEC 316

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
            A   P  K +  WL+  EP+  +     +Q     L +T  +  D+G Y C A+ +   
Sbjct: 317 KANGRP--KPTYRWLKNGEPLLTQDR---IQIEQGMLNMTTVNLSDAGMYQCVAENKHGV 371

Query: 390 IEAQATLTV 398
           I A A L+V
Sbjct: 372 IFASAELSV 380



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 117/300 (39%), Gaps = 34/300 (11%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +EE+ V   C+  G P+P I W  NG  +     + R  V 
Sbjct: 1   MLHGPIFVQEPSHVMFPLDSEEKKVRLSCEVKGNPKPHIRWKLNGTVVDIG-MDFRYSVV 59

Query: 179 PNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTV 236
              + I N  K+ D G Y C ATNS G +         A+        +   +V  G+ +
Sbjct: 60  EGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRQGQGM 119

Query: 237 VLTCRVFGAPKPEVN-----WIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYTCFA 289
           VL C     P P        WI N+        R+   ETG+L I  V  +D G YTC  
Sbjct: 120 VLLC----GPPPHAGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVV 175

Query: 290 RNK------LG-----TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            N       LG       +  G +   E       PE      G +    C A+ +P   
Sbjct: 176 TNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAAKGTTVKLECFALGNPV-- 233

Query: 339 LSIVWLR-GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
            +I+W R   +PI  ++  R  +SN   L +    + D+G Y C A+       A+  LT
Sbjct: 234 PTIIWRRVDGKPIARKA--RRHKSNGI-LEIPNFQQEDAGLYECVAENSRGKNVAKGQLT 290



 Score = 39.3 bits (90), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 21/191 (10%)

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 492
           G  +GY+V+ W   D E + R+ I   G  T+T++     ++     V A+N A  GP S
Sbjct: 809 GRIQGYEVKYWRHDDKEENARK-IRTIGNHTSTKITNLKGSALYHLAVKAYNSAGTGPSS 867

Query: 493 EIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKG 546
             ++  T    P   PG +    +     S   L W  VK       + GYK+ Y+  + 
Sbjct: 868 ATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNRQ 923

Query: 547 TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPD 606
           +           + +   TS +L+ L     Y I +  ++  GDG+ S+ +  +P  +  
Sbjct: 924 SSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIPKISNA 973

Query: 607 NVEGRGSTPNN 617
              G G++ +N
Sbjct: 974 YARGSGASTSN 984


>gi|395541203|ref|XP_003772536.1| PREDICTED: contactin-1-like, partial [Sarcophilus harrisii]
          Length = 643

 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 179/387 (46%), Gaps = 28/387 (7%)

Query: 24  ISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQG 83
           +S    +  P    V  K   AL    V L C   G P+P+  W K   P+  +  IS  
Sbjct: 221 LSDRTTKLYPADIKVQFKDTYALMGHNVTLECFALGNPVPEIRWRKVLEPMPSTAEISMS 280

Query: 84  NYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET- 142
             G  L I +++  D+G+Y CE  N  G+ + +   + V A P +    E IN  E +  
Sbjct: 281 --GAVLKIFNIQLEDEGTYECEAENIRGKDR-HQARIYVQAFPEWV---EHINDTEADIG 334

Query: 143 --VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
             + + C A+G P P I W+ NG    +             + +  L   + G Y C A 
Sbjct: 335 SDLYWPCVATGKPIPTIRWLRNGYAYHKG-----------ELRLYGLTFDNAGMYQCIAE 383

Query: 201 NSLGYVYKDVYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE 258
           N+ G +Y +  + +LA AP  E+    K      G  V++ C+   APKP+ +W    + 
Sbjct: 384 NAHGAIYANAELKILAMAPTFEMNPMKKKTLAAKGGRVLIECKPKAAPKPKFSWSKGTEW 443

Query: 259 LTGG-RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDY 317
           L    R  I + G L+I ++  AD G YTCFA N  G A  +G+L + + T IT  P + 
Sbjct: 444 LVNSTRILIWDDGSLEIRNITRADEGTYTCFAENNRGKANNTGTLLITDATRITLPPANA 503

Query: 318 EVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSS 372
           +V  G++AT +C A  DP+L L+ +W      IDF  E       F+  ++  L +  + 
Sbjct: 504 DVTVGENATMQCAASHDPALDLTFIWSLNGYVIDFNKENSHYMRNFMIDSNGDLLIKNAQ 563

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQ 399
              +G+YTC AQT +D   A A L V+
Sbjct: 564 LKHAGRYTCTAQTIVDNSSASADLVVR 590



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 138/373 (36%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVE-FSDQGSYTCEVS 107
           KV L C    +P P   W  +   I+  ++R S    G +L+I + +   D G Y C  S
Sbjct: 49  KVSLNCRARASPFPVYKWRMNNWDIDLTNERYSM--VGGNLVINNPDKLRDAGKYFCLAS 106

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E   +   C      +P  H        
Sbjct: 107 NIYGMVRSTEATLSFGYLDPFPPEERVEVKVKEGIGLVLLC------DPPYHFPDDLSYR 160

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           W+ N  PI     + RR V      + I N+ +SD GNY C  ++    + K V+   + 
Sbjct: 161 WLLNEFPIF-ITMDKRRYVSQTNGNLYIANVEESDRGNYSCFVSSP--SITKSVFSKFIP 217

Query: 217 HAP-----------EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
             P           +I    KD Y + G  V L C   G P PE+ W    + +      
Sbjct: 218 LIPLSDRTTKLYPADIKVQFKDTYALMGHNVTLECFALGNPVPEIRWRKVLEPMPSTAEI 277

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
            +    LKI ++   D G Y C A N  G  +    + V+      +   D E + G   
Sbjct: 278 SMSGAVLKIFNIQLEDEGTYECEAENIRGKDRHQARIYVQAFPEWVEHINDTEADIGSDL 337

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WLR       + E R      Y LT       ++G Y C A+ 
Sbjct: 338 YWPCVATGKPI--PTIRWLRNGYAY-HKGELRL-----YGLTFD-----NAGMYQCIAEN 384

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 385 AHGAIYANAELKI 397


>gi|195439078|ref|XP_002067458.1| GK16432 [Drosophila willistoni]
 gi|194163543|gb|EDW78444.1| GK16432 [Drosophila willistoni]
          Length = 2188

 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 179/705 (25%), Positives = 279/705 (39%), Gaps = 114/705 (16%)

Query: 32  APKQQYVTRKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGN--YGK 87
           AP+     +  +V L    VEL CI    PL +  T+W KDG+ +  +      N  + +
Sbjct: 212 APEIIVRPQDMKVKLGTGVVELQCIANARPLHELETLWLKDGLAVETAGVRHTLNDPWNR 271

Query: 88  SLIIKHVEFSDQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET--- 142
           +L +     S  G YTC+V   +G  +  S S  + +L  P       F      ET   
Sbjct: 272 TLALLQANSSHSGEYTCQVRLRSGGYDTVSASAKIQILEPP------AFFTPTRAETYGD 325

Query: 143 ----VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGC 197
               V   C   G P P++ W  N + +     N R  +   N + I+ L   D   + C
Sbjct: 326 FGGQVQLPCDVVGEPAPQVQWYRNAESVESQIKNGRYSLSADNTLIIKKLSLDDAAMFQC 385

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK 257
            A N  G      ++ V   AP + + P++   +DGK   + CR  GAP P + WI+N+ 
Sbjct: 386 LAINEAGENSASTWLRVKTSAPVLEQPPQNVTALDGKDATILCRAIGAPNPNITWIYNET 445

Query: 258 ELT--GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE 315
           +L     R  ILE+GDL I+++  +D+G Y C   N+ G+ +G   L+V   T I   P 
Sbjct: 446 QLVEISSRVQILESGDLLISNIRASDAGLYICVRANEAGSVKGEAFLSVLVRTQIIQPPV 505

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
           D  V  G +AT +C   SDPS+  +I W R  +     +  R     D  L +      D
Sbjct: 506 DTTVLLGLTATLQCKVSSDPSVPYNIDWYREGQSAPISNSQRIGVQADGQLEIQAVRASD 565

Query: 376 SGQYTCRAQTELDFIEAQATLTV-QVPLEAPSNFTLIQVIDAKKAV--VSWNPVSPQSLR 432
            G Y C   +        A L+V ++P   PSN  + ++ + ++    VSW P       
Sbjct: 566 VGSYACVVTSPGGNETRSARLSVIELPF-PPSNVKVERLPEPQQRSINVSWTP------- 617

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFV--------------------- 471
               G+        DG   I + I+ + E   +E++KFV                     
Sbjct: 618 ----GF--------DGNSPISKFIIQRRE--VSELEKFVGPVPDPLLNWITELSNVSADQ 663

Query: 472 ---------PASKNFARVLAFNGAYNGPPSEIISFV-----TPEGVP-GTVQSLEAIPLG 516
                     A+    RV A N    G PSE  + V      P G P G V S  ++   
Sbjct: 664 RSIVLENLKAATVYQFRVSAVNRVGEGSPSEPSNVVELPQEAPSGPPVGFVGSARSM--- 720

Query: 517 SSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK----LA 570
            S    +W  P  E  NG ++GY ++Y+      V       P+     T  A+    + 
Sbjct: 721 -SEIITQWQPPLEEHRNGQILGYILRYRLFGYNNV-------PWSYQNITNEAQRNFLIQ 772

Query: 571 GLEPSTKYRIHLAGYTKAG-----DGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAM 625
            L     Y + +A Y   G     +G++ K    VP   P  V+ +        I+WT  
Sbjct: 773 ELITWKDYIVQIAAYNNMGVGVYTEGSKIKTKEGVPEAPPTQVKVKALNSTAAKINWTPP 832

Query: 626 PEIEHNAPHFKYRIFWRRHNTGEAWNQDDV-LDWRQSELVLANQP 669
              + N  +  Y+I        +AW +  +  +WR  E  +   P
Sbjct: 833 NPQQINGINQGYKI--------QAWQKRLIESEWRDVERRMITVP 869



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 139/612 (22%), Positives = 244/612 (39%), Gaps = 70/612 (11%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKS----LIIKHVEFSDQGSYTCE 105
           +V+L C   G P PQ  W ++   +    +I  G Y  S    LIIK +   D   + C 
Sbjct: 329 QVQLPCDVVGEPAPQVQWYRNAESVE--SQIKNGRYSLSADNTLIIKKLSLDDAAMFQCL 386

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             N  GE  + +      +AP     P+ + A + +  T  C+A G P P I W++N   
Sbjct: 387 AINEAGENSASTWLRVKTSAPVLEQPPQNVTALDGKDATILCRAIGAPNPNITWIYNETQ 446

Query: 166 ISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           + +   + R ++     + I N+R SD G Y C   N  G V  + +++VL    +I + 
Sbjct: 447 LVEI--SSRVQILESGDLLISNIRASDAGLYICVRANEAGSVKGEAFLSVLVRT-QIIQP 503

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKEL---TGGRYTILETGDLKITDVAF 279
           P D   + G T  L C+V   P     ++W    +        R  +   G L+I  V  
Sbjct: 504 PVDTTVLLGLTATLQCKVSSDPSVPYNIDWYREGQSAPISNSQRIGVQADGQLEIQAVRA 563

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKE--------HTHITDQPEDYEVEAGQSATFRCNA 331
           +D G Y C   +  G    S  L+V E              +P+   +    +  F  N+
Sbjct: 564 SDVGSYACVVTSPGGNETRSARLSVIELPFPPSNVKVERLPEPQQRSINVSWTPGFDGNS 623

Query: 332 VSDPSLKLSIVWLRGSEP-----------IDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
              P  K  I     SE            +++ +E   V ++  S+ +         Q+ 
Sbjct: 624 ---PISKFIIQRREVSELEKFVGPVPDPLLNWITELSNVSADQRSIVLENLKAATVYQFR 680

Query: 381 CRAQTEL-DFIEAQATLTVQVPLEAPSNFTLIQVIDAK---KAVVSWNPVSPQSLRGHFR 436
             A   + +   ++ +  V++P EAPS   +  V  A+   + +  W P   +   G   
Sbjct: 681 VSAVNRVGEGSPSEPSNVVELPQEAPSGPPVGFVGSARSMSEIITQWQPPLEEHRNGQIL 740

Query: 437 GYKVQ---------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
           GY ++          W+ ++        I N+ +     + + +       ++ A+N   
Sbjct: 741 GYILRYRLFGYNNVPWSYQN--------ITNEAQRNFL-IQELITWKDYIVQIAAYNNMG 791

Query: 488 NGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWV--KPEQPNGVLMGYKIK--YQ 542
            G  +E     T EGVP      ++   L S+A  + W    P+Q NG+  GYKI+   +
Sbjct: 792 VGVYTEGSKIKTKEGVPEAPPTQVKVKALNSTAAKINWTPPNPQQINGINQGYKIQAWQK 851

Query: 543 SVKGTKVGPLLERL----PYISDPTT-TSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL 597
            +  ++   +  R+    P + DP     A L+GL+   +Y I +  +T  GDG  S+ +
Sbjct: 852 RLIESEWRDVERRMITVPPSLIDPLAEQGAILSGLDKFAEYNISVLCFTDPGDGVASQQV 911

Query: 598 FYVPFKN-PDNV 608
           +     + PD +
Sbjct: 912 YVKTLDDVPDEI 923



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 139/625 (22%), Positives = 244/625 (39%), Gaps = 116/625 (18%)

Query: 45   ALRNKKVELFCIFGGTPLPQTIWSKDGVP-INPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
            AL  K   + C   G P P   W  +    +  S R+     G  L+I ++  SD G Y 
Sbjct: 418  ALDGKDATILCRAIGAPNPNITWIYNETQLVEISSRVQILESGD-LLISNIRASDAGLYI 476

Query: 104  CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEP--EIHWVH 161
            C  +N  G  K  +  LSVL        P         T T +CK S  P     I W  
Sbjct: 477  CVRANEAGSVKGEAF-LSVLVRTQIIQPPVDTTVLLGLTATLQCKVSSDPSVPYNIDWYR 535

Query: 162  NGKPISQAPPNPRRKVG---PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA-- 216
             G+    AP +  +++G     ++ I+ +R SD G+Y C  T+  G   +   ++V+   
Sbjct: 536  EGQ---SAPISNSQRIGVQADGQLEIQAVRASDVGSYACVVTSPGGNETRSARLSVIELP 592

Query: 217  ---------HAPEITE--------------APKDEYTVDGKTVVLTCRVFG-APKPEVNW 252
                       PE  +              +P  ++ +  + V    +  G  P P +NW
Sbjct: 593  FPPSNVKVERLPEPQQRSINVSWTPGFDGNSPISKFIIQRREVSELEKFVGPVPDPLLNW 652

Query: 253  IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD 312
            I     ++  + +I+      + ++  A   ++   A N++G  +GS S    E +++ +
Sbjct: 653  ITELSNVSADQRSIV------LENLKAATVYQFRVSAVNRVG--EGSPS----EPSNVVE 700

Query: 313  QPEDYEVEAGQSATFRCNAVS--------DPSLKLS--------IVWLR----GSEPIDF 352
             P+  E  +G    F  +A S         P L+          I+  R     + P  +
Sbjct: 701  LPQ--EAPSGPPVGFVGSARSMSEIITQWQPPLEEHRNGQILGYILRYRLFGYNNVPWSY 758

Query: 353  ESEPRFVQSN----------DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPL 402
            ++     Q N          DY + +   + +  G YT          E     T +   
Sbjct: 759  QNITNEAQRNFLIQELITWKDYIVQIAAYNNMGVGVYT----------EGSKIKTKEGVP 808

Query: 403  EAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIREL------- 455
            EAP     ++ +++  A ++W P +PQ + G  +GYK+Q W ++  E   R++       
Sbjct: 809  EAPPTQVKVKALNSTAAKINWTPPNPQQINGINQGYKIQAWQKRLIESEWRDVERRMITV 868

Query: 456  -------IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ 508
                   +  +G +  + +DKF  A  N + VL F    +G  S+ +   T + VP  + 
Sbjct: 869  PPSLIDPLAEQG-AILSGLDKF--AEYNIS-VLCFTDPGDGVASQQVYVKTLDDVPDEIT 924

Query: 509  SLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYIS-DPTTTSA 567
            +L    +   +  + W  P   NG+L GY ++YQ     K  P  E +  I+     T  
Sbjct: 925  ALHFDEVSDRSVKVLWAPPRYANGILTGYTVRYQ----IKDQP--ETMKSINLTAEDTQL 978

Query: 568  KLAGLEPSTKYRIHLAGYTKAGDGA 592
             +  L+ +T Y   +  +T+ G GA
Sbjct: 979  TVNQLQATTHYWFEIFAWTRVGSGA 1003



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 157/414 (37%), Gaps = 76/414 (18%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLI--IKHVEFSDQGSYTCEVSNGV 110
           L C   G P P   W KDG+P+        G+Y  S    I      D GSY C   N  
Sbjct: 44  LQCHALGYPQPTYRWLKDGIPV--------GDYSTSQFYRIPSTRREDAGSYQCIAKNDA 95

Query: 111 GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKAS--------GLPEPEIHWVHN 162
           G   S   + S +   Y  +   F N  E          +         +P P + W   
Sbjct: 96  GSIFS---EKSTVVVAYMGI---FENITEGRLSVISGHPAIFDMPIIESVPAPSVVWQSE 149

Query: 163 GKPIS----QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS-LGY----------VY 207
             P+S     A  +P      N++ I +  ++D   Y   A N+ LG           + 
Sbjct: 150 DGPLSYDIKYAFTSPS-----NQLIILSADENDRKGYRARAINTQLGKEEISAFVHLNIS 204

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVN--WIHN--QKELTGG 262
            D YV V   APEI   P+D     G  VV L C     P  E+   W+ +    E  G 
Sbjct: 205 GDPYVEV---APEIIVRPQDMKVKLGTGVVELQCIANARPLHELETLWLKDGLAVETAGV 261

Query: 263 RYTILETGD--LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP------ 314
           R+T+ +  +  L +     + SGEYTC  R + G   G  +++      I + P      
Sbjct: 262 RHTLNDPWNRTLALLQANSSHSGEYTCQVRLRSG---GYDTVSASAKIQILEPPAFFTPT 318

Query: 315 --EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKS 371
             E Y    GQ     C+ V +P+ ++   W R +E ++ +    R+  S D +L + K 
Sbjct: 319 RAETYGDFGGQ-VQLPCDVVGEPAPQVQ--WYRNAESVESQIKNGRYSLSADNTLIIKKL 375

Query: 372 SELDSGQYTCRAQTELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVV 421
           S  D+  + C A  E     A   L V+    V  + P N T    +D K A +
Sbjct: 376 SLDDAAMFQCLAINEAGENSASTWLRVKTSAPVLEQPPQNVT---ALDGKDATI 426



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/309 (21%), Positives = 123/309 (39%), Gaps = 38/309 (12%)

Query: 125 APYFTVEPEFINA--AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
           AP FT  P    +  +E  T   +C A G P+P   W+ +G P+     +   +      
Sbjct: 22  APRFTTHPSSSGSIVSEGSTKILQCHALGYPQPTYRWLKDGIPVGDYSTSQFYR------ 75

Query: 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA---PEITEAPKDEYTVDGKTVVLT 239
            I + R+ D G+Y C A N  G ++ +    V+A+      ITE       + G   +  
Sbjct: 76  -IPSTRREDAGSYQCIAKNDAGSIFSEKSTVVVAYMGIFENITEGRLS--VISGHPAIFD 132

Query: 240 CRVF-GAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQ 297
             +    P P V W      L+   +Y      +  I  +  AD  +   +    + T  
Sbjct: 133 MPIIESVPAPSVVWQSEDGPLSYDIKYAFTSPSNQLI--ILSADENDRKGYRARAINTQL 190

Query: 298 GSGSLTVKEHTHITD------------QPEDYEVEAGQSAT-FRCNAVSDPSLKLSIVWL 344
           G   ++   H +I+             +P+D +V+ G      +C A + P  +L  +WL
Sbjct: 191 GKEEISAFVHLNISGDPYVEVAPEIIVRPQDMKVKLGTGVVELQCIANARPLHELETLWL 250

Query: 345 RGSEPIDFESEPRFVQSN-DYSLTVTKSSELDSGQYTCRAQTE---LDFIEAQATLTVQV 400
           +    ++       +    + +L + +++   SG+YTC+ +      D + A A + +  
Sbjct: 251 KDGLAVETAGVRHTLNDPWNRTLALLQANSSHSGEYTCQVRLRSGGYDTVSASAKIQI-- 308

Query: 401 PLEAPSNFT 409
            LE P+ FT
Sbjct: 309 -LEPPAFFT 316



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 72/154 (46%), Gaps = 12/154 (7%)

Query: 480  VLAFNGAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMG 536
            VL FN    GP +   +    E VP G  + ++A P+ S+   L+W  P+Q   NG ++G
Sbjct: 1620 VLPFNSQGPGPATPPAAVYVGEAVPTGEPREVDAAPISSTEVRLRWEPPKQSMQNGDILG 1679

Query: 537  YKIKY---QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
            YKI Y    S +  + G   E    +   T TS  L  L+  T+YRI L  +  AGDG  
Sbjct: 1680 YKIFYLVTYSPQALEPGRKWEEEIEVVSATATSHSLVFLDKFTEYRIQLLAFNPAGDGPR 1739

Query: 594  S-----KYLFYVPFKNPDNVEGRGSTPNNLVISW 622
            S     K L  VP   P N+     T  +L ++W
Sbjct: 1740 SSPITVKTLPGVP-SAPLNLRFTDITMQSLEVTW 1772



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 91/221 (41%), Gaps = 40/221 (18%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV-QTWTEKDGEGSI------- 452
            PL+  +N T      +   VV W  V PQ   G   GYKV     ++ G G++       
Sbjct: 1227 PLDVQANAT-----SSTTVVVRWGEVPPQHRNGQIDGYKVFYAAPDRIGAGAVGPGGNPG 1281

Query: 453  ------RELIVNKGESTTT--EVDKFVPASKNFARVLAF----NGAYNGPPSEIISFVTP 500
                   + I N    TTT  E+ K+V       +VLA+    NGA + PP  + +F   
Sbjct: 1282 SGGLLLHKTIPNNSSFTTTLTELKKYV---VYHVQVLAYTRLGNGALSTPPVRVQTF--- 1335

Query: 501  EGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560
            E  PG   ++    +  S   + W +PE PNG ++ Y++ Y ++ G+        L Y  
Sbjct: 1336 EDTPGAPSNVSFPDVTFSMARIIWDEPEDPNGEILAYQVTY-TLNGSS------NLNYSR 1388

Query: 561  D--PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY 599
            +  P+    +   L P   Y   +   T+ G G  +  L Y
Sbjct: 1389 EFSPSDRLFRATQLLPERYYSFSVTAQTRLGWGKTATVLVY 1429



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 52/238 (21%), Positives = 100/238 (42%), Gaps = 17/238 (7%)

Query: 414  IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPA 473
            +  +   V W P  P+   G   GY V+ +  KD   +++ + +   E T   V++    
Sbjct: 931  VSDRSVKVLWAP--PRYANGILTGYTVR-YQIKDQPETMKSINLT-AEDTQLTVNQLQAT 986

Query: 474  SKNFARVLAFNGAYNGPP--SEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPN 531
            +  +  + A+    +G P  + I S V P  +P    +L    + + +  L++      N
Sbjct: 987  THYWFEIFAWTRVGSGAPKTATIQSGVEPV-LPHPPTNLALSNIEAFSVVLQFTPGFDGN 1045

Query: 532  GVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA-----GYT 586
              +  +K++ Q+ +      + E    ISDP   +  + GL P T+YR+ L+     G +
Sbjct: 1046 SSITKWKVEAQTARNMTWFTICE----ISDPDAETLTVTGLVPFTQYRLRLSATNVVGSS 1101

Query: 587  KAGDGAES-KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            +A D  +  + +   P   P NV  R  +   L + W  + + E       Y I +R+
Sbjct: 1102 RASDATKDFQTIQARPMHAPFNVTVRAMSAQQLRVRWIPLQQTEWFGNPRGYNITYRQ 1159



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 12/144 (8%)

Query: 414  IDAKKAVVSWNPVSPQSLRGHFRGYKV---QTWTEKDGEGSIR---ELIVNKGESTTTEV 467
            I + +  + W P       G   GYK+    T++ +  E   +   E+ V    +T+  +
Sbjct: 1656 ISSTEVRLRWEPPKQSMQNGDILGYKIFYLVTYSPQALEPGRKWEEEIEVVSATATSHSL 1715

Query: 468  ---DKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW 524
               DKF   ++   ++LAFN A +GP S  I+  T  GVP    +L    +   +  + W
Sbjct: 1716 VFLDKF---TEYRIQLLAFNPAGDGPRSSPITVKTLPGVPSAPLNLRFTDITMQSLEVTW 1772

Query: 525  VKPEQPNGVLMGYKIKYQSVKGTK 548
              P+  NG ++GY + Y++ +  +
Sbjct: 1773 DPPKFRNGEILGYLVTYETTEANE 1796


>gi|410920627|ref|XP_003973785.1| PREDICTED: contactin-3-like [Takifugu rubripes]
          Length = 1027

 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 164/621 (26%), Positives = 256/621 (41%), Gaps = 42/621 (6%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V L C   G P+P+  W +  GVP  PS ++   N    L I + +  D G+Y 
Sbjct: 243 AAKESAVRLECFALGNPVPEISWRRTSGVPF-PS-KVKMKNSNAVLEIPNFQQEDAGTYE 300

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    LS  A P++ +       + E  + +ECKA+G P+P   W+ NG
Sbjct: 301 CVAENWRGKNAARG-RLSFHAKPHWLLTMADTALSVEANLFWECKANGKPKPSYSWLKNG 359

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           +   Q     R ++    ++I  L  SD+G Y C A N  G +Y    + VLA  P  ++
Sbjct: 360 E---QLAAEGRIQIENGALSIAALNLSDSGMYQCVAENKHGVIYSSAQLMVLASPPSFSK 416

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
           +P         G  V L C+    P     W    + L    R T+L  G L+I +    
Sbjct: 417 SPLKALLKARTGSEVTLECKPEAWPPAISLWKKGNEILQRAERMTLLPNGTLRIANATRQ 476

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A+N+ GTA  +G L + E T IT +P + E+  G+SA   C   SDP+L +S
Sbjct: 477 DAGSYTCVAKNQFGTASTTGKLLITEPTRITMRPTNTEIIVGESAVLPCQIASDPALDVS 536

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W    + IDF+ +     R   S    L +        G+Y C   T+++ +   A L
Sbjct: 537 FSWAFNGQLIDFQRDGNHFERVGGSVSGDLMIRNIQLSHGGKYVCLIDTDVESLSTSAIL 596

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKDGE 449
            V+ P   P   T+ ++ D+  A +SW P           GY +Q        W   D  
Sbjct: 597 VVKGPPGPPDKVTVEEITDS-TAQLSWTPGRDNG--SPITGYIIQARTPFTVGWQAVD-- 651

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQ 508
            ++ E ++N    T T V         F RV+A N    G PS   +   T + +P T  
Sbjct: 652 -TVPE-VINGNLLTATVVGLNAWVEYEF-RVVARNTVGLGEPSPASTKTRTEDSIPDTAP 708

Query: 509 SLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565
           +      G+ S   + W  V  E  NG   GY I ++ +            P I      
Sbjct: 709 TDVGGGGGTKSELVITWEPVPEELQNGDGFGYIIAFRPLGLVTWTRAAISTPGIGRYVFR 768

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEGRGSTPNNLVI 620
           +  +    P   + + +  Y   G+G  S          VP   P  V  R  +   + +
Sbjct: 769 NDTIPAFSP---FEVKVGAYNNRGEGPFSSIATVYSAEEVPSVAPKRVRTRSVSAVQIEV 825

Query: 621 SWTAMPEIEHNAPHFKYRIFW 641
            W A+P +      ++  ++W
Sbjct: 826 IWEALPALPERVLGYEV-VYW 845



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 157/630 (24%), Positives = 249/630 (39%), Gaps = 70/630 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L +  VE SD G+YTC V+N V   K  S    ++           P   V  PE + A
Sbjct: 184 NLYVAKVERSDVGNYTCVVNNTVTGDKVLSSPTPLVLRTDGVMGEYEPKIEVHFPESVPA 243

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+E  V  EC A G P PEI W   +G P    P   + K     + I N ++ D G Y 
Sbjct: 244 AKESAVRLECFALGNPVPEISWRRTSGVPF---PSKVKMKNSNAVLEIPNFQQEDAGTYE 300

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A N  G       ++  A    +        +V+   +   C+  G PKP  +W+ N 
Sbjct: 301 CVAENWRGKNAARGRLSFHAKPHWLLTMADTALSVEAN-LFWECKANGKPKPSYSWLKNG 359

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTV-KEHTHITDQPE 315
           ++L       +E G L I  +  +DSG Y C A NK G    S  L V       +  P 
Sbjct: 360 EQLAAEGRIQIENGALSIAALNLSDSGMYQCVAENKHGVIYSSAQLMVLASPPSFSKSPL 419

Query: 316 DYEVEA--GQSATFRCNAVS-DPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
              ++A  G   T  C   +  P++ L   W +G+E +  +   R     + +L +  ++
Sbjct: 420 KALLKARTGSEVTLECKPEAWPPAISL---WKKGNEIL--QRAERMTLLPNGTLRIANAT 474

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV----VSWNPVSP 428
             D+G YTC A+ +         L +  P       T  ++I  + AV    ++ +P   
Sbjct: 475 RQDAGSYTCVAKNQFGTASTTGKLLITEPTRITMRPTNTEIIVGESAVLPCQIASDPALD 534

Query: 429 QSLRGHFRGYKVQTWTEKD----------GEGSIRELIVNKGESTTTEVDKFVPASKNFA 478
            S    F G  +    + +          G+  IR + ++ G      +D  V  S + +
Sbjct: 535 VSFSWAFNGQLIDFQRDGNHFERVGGSVSGDLMIRNIQLSHGGKYVCLIDTDV-ESLSTS 593

Query: 479 RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV-LMGY 537
            +L   G   GPP ++           TV+ +       S   L W  P + NG  + GY
Sbjct: 594 AILVVKGP-PGPPDKV-----------TVEEIT-----DSTAQLSWT-PGRDNGSPITGY 635

Query: 538 KIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----- 591
            I  Q+     VG   ++ +P + +    +A + GL    +Y   +      G G     
Sbjct: 636 II--QARTPFTVGWQAVDTVPEVINGNLLTATVVGLNAWVEYEFRVVARNTVGLGEPSPA 693

Query: 592 -AESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
             +++    +P   P +V G G T + LVI+W  +PE   N   F Y I +R       W
Sbjct: 694 STKTRTEDSIPDTAPTDVGGGGGTKSELVITWEPVPEELQNGDGFGYIIAFRPLGL-VTW 752

Query: 651 NQDDVLDWRQSELVLANQ--PTFQPYEIKV 678
            +  +        V  N   P F P+E+KV
Sbjct: 753 TRAAISTPGIGRYVFRNDTIPAFSPFEVKV 782



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 162/675 (24%), Positives = 259/675 (38%), Gaps = 86/675 (12%)

Query: 23  GISASQNR---HAPKQQYVTRKKEVALRNKKVELF--CIFGGTPLPQTIWSKDGVPINPS 77
           G +A++ R   HA K  ++    + AL + +  LF  C   G P P   W K+G  +   
Sbjct: 308 GKNAARGRLSFHA-KPHWLLTMADTAL-SVEANLFWECKANGKPKPSYSWLKNGEQLAAE 365

Query: 78  DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAP-YFTVEP--EF 134
            RI   N   +L I  +  SD G Y C   N  G   S S  L VLA+P  F+  P    
Sbjct: 366 GRIQIEN--GALSIAALNLSDSGMYQCVAENKHGVIYS-SAQLMVLASPPSFSKSPLKAL 422

Query: 135 INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTG 193
           + A     VT ECK    P P I     G  I Q     R  + PN  + I N  + D G
Sbjct: 423 LKARTGSEVTLECKPEAWP-PAISLWKKGNEILQRAE--RMTLLPNGTLRIANATRQDAG 479

Query: 194 NYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVN-- 251
           +Y C A N  G       + ++     IT  P +   + G++ VL C++   P  +V+  
Sbjct: 480 SYTCVAKNQFGTASTTGKL-LITEPTRITMRPTNTEIIVGESAVLPCQIASDPALDVSFS 538

Query: 252 WIHNQK-----------ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSG 300
           W  N +           E  GG  +    GDL I ++  +  G+Y C     + +   S 
Sbjct: 539 WAFNGQLIDFQRDGNHFERVGGSVS----GDLMIRNIQLSHGGKYVCLIDTDVESLSTSA 594

Query: 301 SLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDF-----ESE 355
            L VK      D+    E+    +A        D    ++   ++   P        ++ 
Sbjct: 595 ILVVKGPPGPPDKVTVEEI-TDSTAQLSWTPGRDNGSPITGYIIQARTPFTVGWQAVDTV 653

Query: 356 PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV-----QVPLEAPSNFTL 410
           P  +  N  + TV   +     ++   A+  +   E     T       +P  AP++   
Sbjct: 654 PEVINGNLLTATVVGLNAWVEYEFRVVARNTVGLGEPSPASTKTRTEDSIPDTAPTDVGG 713

Query: 411 IQVIDAKKAVVSWNPVSPQSLRG--------HFRGYKVQTWTEKDGEGSIRELIVNKGES 462
                ++  V++W PV P+ L+          FR   + TWT        R  I   G  
Sbjct: 714 GGGTKSE-LVITWEPV-PEELQNGDGFGYIIAFRPLGLVTWT--------RAAISTPGIG 763

Query: 463 TTTEVDKFVPASKNF-ARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAF 520
                +  +PA   F  +V A+N    GP S I +  + E VP    + +    + +   
Sbjct: 764 RYVFRNDTIPAFSPFEVKVGAYNNRGEGPFSSIATVYSAEEVPSVAPKRVRTRSVSAVQI 823

Query: 521 YLKW-VKPEQPNGVLMGYKIKY--QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTK 577
            + W   P  P  VL GY++ Y     K   VG +     Y      T   + GL+ ST 
Sbjct: 824 EVIWEALPALPERVL-GYEVVYWEDDTKPDTVGKVRISGNY------TVVNITGLKASTV 876

Query: 578 YRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGR--GSTPNNLVISWTAMPEIEH 630
           Y + +A +  AG G +S  +        P + P N++    GST   L + W  +  +E 
Sbjct: 877 YYLSVAAFNTAGPGPQSVPINSTTKEPPPDRAPHNIQWTMIGST---LSLHWDPVIAMET 933

Query: 631 NAPHFKYRIFWRRHN 645
            +    Y +  ++++
Sbjct: 934 ESKVTGYLVLLKKNH 948



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 154/392 (39%), Gaps = 52/392 (13%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS-DQGSYTCEV 106
           +++  + C   G+P PQ  WS +G  I+P +   +   G SLII  ++   D G Y C  
Sbjct: 46  DQRATITCEAEGSPPPQYRWSLNGTVIDPGNDYRRHMSGGSLIISDLDKDQDTGVYQCTA 105

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLP----EPEIHWV 160
            N  G   S    L       F  + +   ++  E + V   C   G P    E    W+
Sbjct: 106 VNTWGAVLSRRASLRFAYLDNFKSQADRSAVHVREGQGVVLLC---GPPVNSGELTYAWI 162

Query: 161 HNGKP--ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL------------- 203
            N  P  + Q   + RR +      + +  + +SD GNY C   N++             
Sbjct: 163 FNEYPHFVQQ---DSRRFISQETGNLYVAKVERSDVGNYTCVVNNTVTGDKVLSSPTPLV 219

Query: 204 ---GYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT 260
                V  +    +  H PE   A K+        V L C   G P PE++W        
Sbjct: 220 LRTDGVMGEYEPKIEVHFPESVPAAKE------SAVRLECFALGNPVPEISWRRTSGVPF 273

Query: 261 GGRYTILETGD-LKITDVAFADSGEYTCFARNKLG--TAQGSGSLTVKEHTHITDQPEDY 317
             +  +  +   L+I +    D+G Y C A N  G   A+G  S   K H  +T      
Sbjct: 274 PSKVKMKNSNAVLEIPNFQQEDAGTYECVAENWRGKNAARGRLSFHAKPHWLLTMADTAL 333

Query: 318 EVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSG 377
            VEA  +  + C A   P  K S  WL+  E +  E     +Q  + +L++   +  DSG
Sbjct: 334 SVEA--NLFWECKANGKP--KPSYSWLKNGEQLAAEGR---IQIENGALSIAALNLSDSG 386

Query: 378 QYTCRAQTELDFIEAQATLTVQVPLEAPSNFT 409
            Y C A+ +   I + A L V   L +P +F+
Sbjct: 387 MYQCVAENKHGVIYSSAQLMV---LASPPSFS 415


>gi|74188643|dbj|BAE28065.1| unnamed protein product [Mus musculus]
          Length = 887

 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 167/632 (26%), Positives = 269/632 (42%), Gaps = 63/632 (9%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P      G    +L I  V F D+G+Y C
Sbjct: 100 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQ----WGTAEPTLQIPSVSFEDEGTYEC 155

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEE------ETVTFECKASGLPEPEIH 158
           E  N  G         +V        +PE++    +        + + C A+G P P + 
Sbjct: 156 EAENSKGRD-------TVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPMVR 208

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P++      R +V    +    L   D+G Y C A N  G +Y    + V A A
Sbjct: 209 WLRNGEPLAS---QNRVEVLAGDLRFSKLNLEDSGMYQCVAENKHGTIYASAELAVQALA 265

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKIT 275
           P+  + P         G  + + C+   APK  + W    + L    R T+   G L I 
Sbjct: 266 PDFRQNPVRRLIPAARGGEISIPCQPRAAPKATILWSKGTEILGNSTRVTVTLDGTLIIR 325

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           +++ +D G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP
Sbjct: 326 NISRSDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGDNLTLQCHASHDP 385

Query: 336 SLKLSIVWLRGSEPIDFES-----EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
           ++ L+  W     P+DF+          V+     LT+  +     G YTC AQT +D  
Sbjct: 386 TMDLTFTWTLDDFPVDFDKPGGHYRRASVKETIGDLTILNAQLRHGGTYTCMAQTVVDGA 445

Query: 391 EAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDG 448
             +AT+ V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G
Sbjct: 446 SKEATVLVRGPPGPPGGVVVRDIGDT-TVQLSWS----RGFDNHSPIAKYTLQARTPPSG 500

Query: 449 E-GSIRELIVN-KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
           +   +R   VN +G + T +V   +P      RV A N    G PS   S + T E VP 
Sbjct: 501 KWKQVRTNPVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSRIRTKEAVPS 560

Query: 506 TVQSLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQ-----SVKGTKV-GPLLERL 556
              S  +   G+     + W  +  E  NG   GY + ++     S +  +V G   +  
Sbjct: 561 VAPSGLSGGGGAPGELTINWTPMSREYQNGDGFGYLLSFRRQGSSSWQTARVPGADTQYF 620

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGR 611
            Y +D          + P T + + +  Y + GDG ES   + Y     P   P  V  +
Sbjct: 621 VYSND---------SIHPYTPFEVKIRSYNRRGDGPESLTAIVYSAEEEPKVAPAKVWAK 671

Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRI-FWR 642
           GS+ + + +SW  + + + N     Y I +W+
Sbjct: 672 GSSSSEMNVSWEPVLQ-DMNGILLGYEIRYWK 702



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 149/652 (22%), Positives = 236/652 (36%), Gaps = 71/652 (10%)

Query: 88  SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
           +L I     SD G+Y+C      + S     +K   ++L+     L AP      P    
Sbjct: 40  NLYIARTNASDLGNYSCLATSHLDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPPETY 99

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + VT EC A G P P I W      +S     P+       + I ++   D G Y 
Sbjct: 100 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-----PQWGTAEPTLQIPSVSFEDEGTYE 154

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V A  PE  +   D     G  +   C   G P+P V W+ N 
Sbjct: 155 CEAENSKGRDTVQGRIIVQAQ-PEWLKVISDTEADIGSNLRWGCAAAGKPRPMVRWLRNG 213

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
           + L       +  GDL+ + +   DSG Y C A NK GT   S  L V+         P 
Sbjct: 214 EPLASQNRVEVLAGDLRFSKLNLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRQNPV 273

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
              + A +            + K +I+W +G+E +   +  R   + D +L +   S  D
Sbjct: 274 RRLIPAARGGEISIPCQPRAAPKATILWSKGTEILGNST--RVTVTLDGTLIIRNISRSD 331

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLE---APS--------NFTLIQVIDAKKAVV--- 421
            G+YTC A+  +    +   L+V+   +   APS        N TL Q   +    +   
Sbjct: 332 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGDNLTL-QCHASHDPTMDLT 390

Query: 422 -SWN----PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
            +W     PV      GH+R   V+   E  G+ +I    +  G + T      V  +  
Sbjct: 391 FTWTLDDFPVDFDKPGGHYRRASVK---ETIGDLTILNAQLRHGGTYTCMAQTVVDGASK 447

Query: 477 FARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMG 536
            A VL                            +    +G +   L W +    +  +  
Sbjct: 448 EATVLVRGPPG------------------PPGGVVVRDIGDTTVQLSWSRGFDNHSPIAK 489

Query: 537 YKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-- 594
           Y ++ ++    K   +    P   +    +A++ GL P   Y   ++     G G  S  
Sbjct: 490 YTLQARTPPSGKWKQVRTN-PVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGP 548

Query: 595 ----KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
               +    VP   P  + G G  P  L I+WT M     N   F Y + +RR  +  +W
Sbjct: 549 SSRIRTKEAVPSVAPSGLSGGGGAPGELTINWTPMSREYQNGDGFGYLLSFRRQGS-SSW 607

Query: 651 NQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
               V        V +N     + P+E+K+       DG  S+  ++ +  E
Sbjct: 608 QTARVPGADTQYFVYSNDSIHPYTPFEVKIRSYNRRGDGPESLTAIVYSAEE 659



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 144/611 (23%), Positives = 230/611 (37%), Gaps = 78/611 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P+   +R+        L    +   D G Y C   N  G   
Sbjct: 197 CAAAGKPRPMVRWLRNGEPLASQNRVEV--LAGDLRFSKLNLEDSGMYQCVAENKHGTIY 254

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F   P    I AA    ++  C+    P+  I W    + +  +  
Sbjct: 255 A-SAELAVQALAPDFRQNPVRRLIPAARGGEISIPCQPRAAPKATILWSKGTEILGNST- 312

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V  +  + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 313 --RVTVTLDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 369

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G  + L C     P  ++ +     +        GG Y   ++ ET GDL I +    
Sbjct: 370 NVGDNLTLQCHASHDPTMDLTFTWTLDDFPVDFDKPGGHYRRASVKETIGDLTILNAQLR 429

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE-----DYEVEAGQS---------AT 326
             G YTC A+  +  A    ++ V+               D  V+   S         A 
Sbjct: 430 HGGTYTCMAQTVVDGASKEATVLVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAK 489

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQYT 380
           +   A + PS K   V    + P++ E      Q        DY   V+ S+ L +G+ +
Sbjct: 490 YTLQARTPPSGKWKQV---RTNPVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPS 546

Query: 381 ---CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRG 437
               R +T+      +A  +V     +       ++       ++W P+S +   G   G
Sbjct: 547 GPSSRIRTK------EAVPSVAPSGLSGGGGAPGEL------TINWTPMSREYQNGDGFG 594

Query: 438 YKVQTWTEKDGEGSIRELIVNKGESTTTEV---DKFVPASKNFARVLAFNGAYNGPPSEI 494
           Y +     + G  S +   V  G  T   V   D   P +    ++ ++N   +GP S  
Sbjct: 595 YLLSF--RRQGSSSWQTARV-PGADTQYFVYSNDSIHPYTPFEVKIRSYNRRGDGPESLT 651

Query: 495 ISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKGTKVGPL 552
               + E  P    + + A    SS   + W    Q  NG+L+GY+I+Y      +    
Sbjct: 652 AIVYSAEEEPKVAPAKVWAKGSSSSEMNVSWEPVLQDMNGILLGYEIRYWKAGDKEAAAD 711

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRG 612
             R   +     +SA++ GL P+TKY + +  Y +AG G  S     +  K P       
Sbjct: 712 RVRTAGLD----SSARVTGLYPNTKYHVTVRAYNRAGTGPASPSADAMTMKPPPR----- 762

Query: 613 STPNNLVISWT 623
             P N  ISWT
Sbjct: 763 RPPGN--ISWT 771


>gi|432859227|ref|XP_004069075.1| PREDICTED: contactin-4-like [Oryzias latipes]
          Length = 1025

 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 167/631 (26%), Positives = 261/631 (41%), Gaps = 66/631 (10%)

Query: 47  RNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           +   V+L C   G P+P   W + DG  +    +I+       L I +    D G Y C 
Sbjct: 246 KGMSVKLECFALGNPVPSISWRRADGNSLAAKIKINH----SVLEIPYFSPEDGGVYECV 301

Query: 106 VSNGVGE--AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
             N  G+  AK + I  +V    +     +    A +  + +ECKA G P P   W+ NG
Sbjct: 302 AENYRGKNVAKGHLIFQNVEHLHWGQTLKD-AQMAIDANLQWECKAFGEPRPTYRWLKNG 360

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           +P++    + R     N +TI  +  SD+G Y C A N+ G ++    + V A  P+ T 
Sbjct: 361 QPLTT---HDRIHTEANTLTISKIALSDSGMYQCIAQNAFGSIHASAELKVAASPPDFTR 417

Query: 224 APKDEYTV--DGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
            P  + TV   G  +VL CR   +P+  + W      L GG R T++E G L++T++   
Sbjct: 418 RPVKKATVLQRGGELVLECRPDASPRATILWWRGSDLLRGGGRQTVMEDGTLRVTNITKL 477

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D G YTC ARN  G +  SG L VKE T I   P   +   GQS    C   SD +L   
Sbjct: 478 DEGRYTCVARNHFGASSSSGLLVVKEPTKIIAPPLSSDASVGQSLVLPCEVASDSTLSPV 537

Query: 341 IVWLRGSEPIDFESEPRF-VQSNDYS--LTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
             W    + IDF  +  F +    ++  L V       +G+Y C  QTE+D + A A L 
Sbjct: 538 FKWFFNGKAIDFNRQDHFEMIGGGFAGDLMVRNVQLKHAGKYVCMVQTEVDTVSAAANLI 597

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPV----SPQSLRGHFRGYKVQTWTEKDGEGSIR 453
           V+ P  A    ++  V D     +SW+P     SP ++      Y VQ  T      SI 
Sbjct: 598 VRGPPGASETPSVTDVTDT-TVKLSWSPAPDNHSPITM------YTVQARTPF----SIG 646

Query: 454 ELIVNK------GESTTTEVDKFVP-ASKNFARVLAFNGAYNGP--PSEIISFVTPEGVP 504
              +N       G+     V   +P     F  V         P  PSE I   T   VP
Sbjct: 647 WQTINTVPDSVPGQMMHAFVTDLIPWVDYEFRVVAVNAVGVGEPSTPSEPIR--TKPAVP 704

Query: 505 GTVQSLEAIPLGSSA-------FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
                    P+  S          + W  V  EQ +G   GY + ++ + GT     ++ 
Sbjct: 705 ------RVAPINVSGGGGTQGELVITWEPVLEEQQSGEDFGYVVAFRPL-GTSA--WIQT 755

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEG 610
                D +    +   + P +++ + +  +   G+G  S+ +  +     P + P ++ G
Sbjct: 756 AVASPDASKYVYRNDSIPPLSQFEVSVGVFNSVGEGPFSQVVVVLSSEGEPSEAPSDIRG 815

Query: 611 RGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
           R ++ + +V+ W  +P    N       +FW
Sbjct: 816 RAASASEIVVFWEPVPSRSTNEIISYELLFW 846



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 111/284 (39%), Gaps = 34/284 (11%)

Query: 125 APYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P F+ EP    F  +  +  V   CKA G P P   W  NG+ +     +  R +  N 
Sbjct: 30  GPVFSQEPSDIIFPMSTGDNLVIINCKAKGNPPPHYRWKVNGEDLDTNSDSNYRLLEGNL 89

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTC 240
           +       S  G Y C ATN  G +         A     +  P++  +V +G+ VVL C
Sbjct: 90  LISNPDFISHGGVYQCIATNVFGTIVSRNARVQFAFLQSFSRKPRNPVSVREGQAVVLLC 149

Query: 241 RVFGAP-----KPEVNWIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCFARN 291
               AP     + + +W+ N++    +    R+    TG+L I  V   D+G YTC  RN
Sbjct: 150 ----APPSHHGEIQYSWVSNREPRPLQQDARRFISQRTGNLYIAKVEAEDAGNYTCAVRN 205

Query: 292 KLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSLKLS 340
            +  +    S   L V+    + +         PE   +  G S    C A+ +P    S
Sbjct: 206 MMTNSSEFSSPTPLVVRRDVIMGEYEPKIEVRFPETLHISKGMSVKLECFALGNPV--PS 263

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           I W R     D  S    ++ N   L +   S  D G Y C A+
Sbjct: 264 ISWRRA----DGNSLAAKIKINHSVLEIPYFSPEDGGVYECVAE 303


>gi|74188525|dbj|BAE28018.1| unnamed protein product [Mus musculus]
          Length = 1040

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 168/626 (26%), Positives = 268/626 (42%), Gaps = 51/626 (8%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P      G    +L I  V F D+G+Y C
Sbjct: 253 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQ----WGTAEPTLQIPSVSFEDEGTYEC 308

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           E  N  G   +    + V A P +        A     + + C A+G P P + W+ NG+
Sbjct: 309 EAENSKGR-DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPMVRWLRNGE 367

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           P++      R +V    +    L   D+G Y C A N  G +Y    + V A AP+  + 
Sbjct: 368 PLAS---QNRVEVLAGDLRFSKLNLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRQN 424

Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P         G  + + C+   APK  + W    + L    R T+   G L I +++ +D
Sbjct: 425 PVRRLIPAARGGEISIPCQPRAAPKATILWSKGTEILGNSTRVTVTLDGTLIIRNISRSD 484

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP++ L+ 
Sbjct: 485 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGDNLTLQCHASHDPTMDLTF 544

Query: 342 VWLRGSEPIDFES-----EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W     P+DF+          V+     LT+  +     G YTC AQT +D    +AT+
Sbjct: 545 TWTLDDFPVDFDKPGGHYRRASVKETIGDLTILNAQLRHGGTYTCMAQTVVDGASKEATV 604

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GSIR 453
            V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G+   +R
Sbjct: 605 LVRGPPGPPGGVVVRDIGDT-TVQLSWS----RGFDNHSPIAKYTLQARTPPSGKWKQVR 659

Query: 454 ELIVN-KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLE 511
              VN +G + T +V   +P      RV A N    G PS   S + T E VP    S  
Sbjct: 660 TNPVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSRIRTKEAVPSVAPSGL 719

Query: 512 AIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQ-----SVKGTKV-GPLLERLPYISDP 562
           +   G+     + W  +  E  NG   GY + ++     S +  +V G   +   Y +D 
Sbjct: 720 SGGGGAPGELTINWTPMSREYQNGDGFGYLLSFRRQGSSSWQTARVPGADTQYFVYSND- 778

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGSTPNN 617
                    + P T + + +  Y + GDG ES   + Y     P   P  V  +GS+ + 
Sbjct: 779 --------SIHPYTPFEVKIRSYNRRGDGPESLTAIVYSAEEEPKVAPAKVWAKGSSSSE 830

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FWR 642
           + +SW  + + + N     Y I +W+
Sbjct: 831 MNVSWEPVLQ-DMNGILLGYEIRYWK 855



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 145/374 (38%), Gaps = 38/374 (10%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN--PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           +V L C    +P     W  +G  +N  P  R  Q   G  +I+   +  D G Y C  S
Sbjct: 58  QVTLACRARASPPATYRWKMNGTEMNLEPGSR-HQLMGGNLVIMSPTKAQDAGVYQCLAS 116

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIH-------W 159
           N VG   S    L       F    EF     +   T E     LP  P  H       W
Sbjct: 117 NPVGTVVSKEAVLR------FGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYRW 170

Query: 160 VHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY-----V 212
           + N  P +  P + R  V      + I     SD GNY C AT+ L +  K V+     +
Sbjct: 171 LLNEFP-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHLDFSTKSVFSKFAQL 229

Query: 213 NVLAHAPEI------TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
           N+ A  P +         P + Y + G+ V L C  FG P P + W      L+    T 
Sbjct: 230 NLAAEDPRLFAPSIKARFPPETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWGTA 289

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
             T  L+I  V+F D G Y C A N  G     G + V+          D E + G +  
Sbjct: 290 EPT--LQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNLR 347

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + C A   P  +  + WLR  EP+  ++    +  +   L  +K +  DSG Y C A+ +
Sbjct: 348 WGCAAAGKP--RPMVRWLRNGEPLASQNRVEVLAGD---LRFSKLNLEDSGMYQCVAENK 402

Query: 387 LDFIEAQATLTVQV 400
              I A A L VQ 
Sbjct: 403 HGTIYASAELAVQA 416



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 152/654 (23%), Positives = 239/654 (36%), Gaps = 75/654 (11%)

Query: 88  SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
           +L I     SD G+Y+C      + S     +K   ++L+     L AP      P    
Sbjct: 193 NLYIARTNASDLGNYSCLATSHLDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPPETY 252

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + VT EC A G P P I W      +S     P+       + I ++   D G Y 
Sbjct: 253 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-----PQWGTAEPTLQIPSVSFEDEGTYE 307

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V A  PE  +   D     G  +   C   G P+P V W+ N 
Sbjct: 308 CEAENSKGRDTVQGRIIVQAQ-PEWLKVISDTEADIGSNLRWGCAAAGKPRPMVRWLRNG 366

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
           + L       +  GDL+ + +   DSG Y C A NK GT   S  L V+         P 
Sbjct: 367 EPLASQNRVEVLAGDLRFSKLNLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRQNPV 426

Query: 316 DYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
              + A  G   +  C   + P  K +I+W +G+E +   +  R   + D +L +   S 
Sbjct: 427 RRLIPAARGGEISIPCQPRAAP--KATILWSKGTEILGNST--RVTVTLDGTLIIRNISR 482

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APS--------NFTLIQVIDAKKAVV- 421
            D G+YTC A+  +    +   L+V+   +   APS        N TL Q   +    + 
Sbjct: 483 SDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGDNLTL-QCHASHDPTMD 541

Query: 422 ---SWN----PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
              +W     PV      GH+R   V+   E  G+ +I    +  G + T      V  +
Sbjct: 542 LTFTWTLDDFPVDFDKPGGHYRRASVK---ETIGDLTILNAQLRHGGTYTCMAQTVVDGA 598

Query: 475 KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
              A VL                            +    +G +   L W +    +  +
Sbjct: 599 SKEATVLVRGPPG------------------PPGGVVVRDIGDTTVQLSWSRGFDNHSPI 640

Query: 535 MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
             Y ++ ++    K   +    P   +    +A++ GL P   Y   ++     G G  S
Sbjct: 641 AKYTLQARTPPSGKWKQVRTN-PVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPS 699

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P  + G G  P  L I+WT M     N   F Y + +RR  +  
Sbjct: 700 GPSSRIRTKEAVPSVAPSGLSGGGGAPGELTINWTPMSREYQNGDGFGYLLSFRRQGS-S 758

Query: 649 AWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
           +W    V        V +N     + P+E+K+       DG  S+  ++ +  E
Sbjct: 759 SWQTARVPGADTQYFVYSNDSIHPYTPFEVKIRSYNRRGDGPESLTAIVYSAEE 812



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 144/611 (23%), Positives = 230/611 (37%), Gaps = 78/611 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P+   +R+        L    +   D G Y C   N  G   
Sbjct: 350 CAAAGKPRPMVRWLRNGEPLASQNRVEV--LAGDLRFSKLNLEDSGMYQCVAENKHGTIY 407

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F   P    I AA    ++  C+    P+  I W    + +  +  
Sbjct: 408 A-SAELAVQALAPDFRQNPVRRLIPAARGGEISIPCQPRAAPKATILWSKGTEILGNST- 465

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V  +  + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 466 --RVTVTLDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 522

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G  + L C     P  ++ +     +        GG Y   ++ ET GDL I +    
Sbjct: 523 NVGDNLTLQCHASHDPTMDLTFTWTLDDFPVDFDKPGGHYRRASVKETIGDLTILNAQLR 582

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE-----DYEVEAGQS---------AT 326
             G YTC A+  +  A    ++ V+               D  V+   S         A 
Sbjct: 583 HGGTYTCMAQTVVDGASKEATVLVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAK 642

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQYT 380
           +   A + PS K   V    + P++ E      Q        DY   V+ S+ L +G+ +
Sbjct: 643 YTLQARTPPSGKWKQV---RTNPVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPS 699

Query: 381 ---CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRG 437
               R +T+      +A  +V     +       ++       ++W P+S +   G   G
Sbjct: 700 GPSSRIRTK------EAVPSVAPSGLSGGGGAPGEL------TINWTPMSREYQNGDGFG 747

Query: 438 YKVQTWTEKDGEGSIRELIVNKGESTTTEV---DKFVPASKNFARVLAFNGAYNGPPSEI 494
           Y +     + G  S +   V  G  T   V   D   P +    ++ ++N   +GP S  
Sbjct: 748 YLLSF--RRQGSSSWQTARV-PGADTQYFVYSNDSIHPYTPFEVKIRSYNRRGDGPESLT 804

Query: 495 ISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKGTKVGPL 552
               + E  P    + + A    SS   + W    Q  NG+L+GY+I+Y      +    
Sbjct: 805 AIVYSAEEEPKVAPAKVWAKGSSSSEMNVSWEPVLQDMNGILLGYEIRYWKAGDKEAAAD 864

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRG 612
             R   +     +SA++ GL P+TKY + +  Y +AG G  S     +  K P       
Sbjct: 865 RVRTAGLD----SSARVTGLYPNTKYHVTVRAYNRAGTGPASPSADAMTMKPPPR----- 915

Query: 613 STPNNLVISWT 623
             P N  ISWT
Sbjct: 916 RPPGN--ISWT 924



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 119/308 (38%), Gaps = 30/308 (9%)

Query: 115 SYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           S+S        P F  +P    F   + E+ VT  C+A   P     W  NG  ++  P 
Sbjct: 28  SFSQGTPATFGPVFEEQPVGLLFPEESAEDQVTLACRARASPPATYRWKMNGTEMNLEPG 87

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-T 230
           +  + +G N + +   +  D G Y C A+N +G V     V       E ++  +D   T
Sbjct: 88  SRHQLMGGNLVIMSPTKAQDAGVYQCLASNPVGTVVSKEAVLRFGFLQEFSKEERDPVKT 147

Query: 231 VDGKTVVLTCRVFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEY 285
            +G  V+L C      P     W+ N+      T GR+ + + TG+L I     +D G Y
Sbjct: 148 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 207

Query: 286 TCFARNKLGTAQGSGSLTVKEHTHITDQ-------------PEDYEVEAGQSATFRCNAV 332
           +C A + L  +  S      +     +              PE Y +  GQ  T  C A 
Sbjct: 208 SCLATSHLDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPPETYAL-VGQQVTLECFAF 266

Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
            +P  +  I W +    +D    P++  + + +L +   S  D G Y C A+        
Sbjct: 267 GNPVPR--IKWRK----VDGSLSPQW-GTAEPTLQIPSVSFEDEGTYECEAENSKGRDTV 319

Query: 393 QATLTVQV 400
           Q  + VQ 
Sbjct: 320 QGRIIVQA 327


>gi|54607084|ref|NP_796103.2| contactin-2 precursor [Mus musculus]
 gi|51704323|sp|Q61330.2|CNTN2_MOUSE RecName: Full=Contactin-2; AltName: Full=Axonal glycoprotein TAG-1;
           AltName: Full=Axonin-1; AltName: Full=Transient axonal
           glycoprotein 1; Short=TAX-1; Flags: Precursor
 gi|41946117|gb|AAH66106.1| Contactin 2 [Mus musculus]
 gi|148707726|gb|EDL39673.1| mCG12584 [Mus musculus]
          Length = 1040

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 168/626 (26%), Positives = 268/626 (42%), Gaps = 51/626 (8%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P      G    +L I  V F D+G+Y C
Sbjct: 253 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQ----WGTAEPTLQIPSVSFEDEGTYEC 308

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           E  N  G   +    + V A P +        A     + + C A+G P P + W+ NG+
Sbjct: 309 EAENSKGR-DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPMVRWLRNGE 367

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           P++      R +V    +    L   D+G Y C A N  G +Y    + V A AP+  + 
Sbjct: 368 PLAS---QNRVEVLAGDLRFSKLNLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRQN 424

Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P         G  + + C+   APK  + W    + L    R T+   G L I +++ +D
Sbjct: 425 PVRRLIPAARGGEISIPCQPRAAPKATILWSKGTEILGNSTRVTVTLDGTLIIRNISRSD 484

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP++ L+ 
Sbjct: 485 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGDNLTLQCHASHDPTMDLTF 544

Query: 342 VWLRGSEPIDFES-----EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W     P+DF+          V+     LT+  +     G YTC AQT +D    +AT+
Sbjct: 545 TWTLDDFPVDFDKPGGHYRRASVKETIGDLTILNAQLRHGGTYTCMAQTVVDGASKEATV 604

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GSIR 453
            V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G+   +R
Sbjct: 605 LVRGPPGPPGGVVVRDIGDT-TVQLSWS----RGFDNHSPIAKYTLQARTPPSGKWKQVR 659

Query: 454 ELIVN-KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLE 511
              VN +G + T +V   +P      RV A N    G PS   S + T E VP    S  
Sbjct: 660 TNPVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSRIRTKEAVPSVAPSGL 719

Query: 512 AIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQ-----SVKGTKV-GPLLERLPYISDP 562
           +   G+     + W  +  E  NG   GY + ++     S +  +V G   +   Y +D 
Sbjct: 720 SGGGGAPGELTINWTPMSREYQNGDGFGYLLSFRRQGSSSWQTARVPGADTQYFVYSND- 778

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGSTPNN 617
                    + P T + + +  Y + GDG ES   + Y     P   P  V  +GS+ + 
Sbjct: 779 --------SIHPYTPFEVKIRSYNRRGDGPESLTAIVYSAEEEPKVAPAKVWAKGSSSSE 830

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FWR 642
           + +SW  + + + N     Y I +W+
Sbjct: 831 MNVSWEPVLQ-DMNGILLGYEIRYWK 855



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 145/374 (38%), Gaps = 38/374 (10%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN--PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           +V L C    +P     W  +G  +N  P  R  Q   G  +I+   +  D G Y C  S
Sbjct: 58  QVTLACRARASPPATYRWKMNGTEMNLEPGSR-HQLMGGNLVIMSPTKAQDAGVYQCLAS 116

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIH-------W 159
           N VG   S    L       F    EF     +   T E     LP  P  H       W
Sbjct: 117 NPVGTVVSKEAVLR------FGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYRW 170

Query: 160 VHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY-----V 212
           + N  P +  P + R  V      + I     SD GNY C AT+ L +  K V+     +
Sbjct: 171 LLNEFP-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHLDFSTKSVFSKFAQL 229

Query: 213 NVLAHAPEI------TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
           N+ A  P +         P + Y + G+ V L C  FG P P + W      L+    T 
Sbjct: 230 NLAAEDPRLFAPSIKARFPPETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWGTA 289

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
             T  L+I  V+F D G Y C A N  G     G + V+          D E + G +  
Sbjct: 290 EPT--LQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNLR 347

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + C A   P  +  + WLR  EP+  ++    +  +   L  +K +  DSG Y C A+ +
Sbjct: 348 WGCAAAGKP--RPMVRWLRNGEPLASQNRVEVLAGD---LRFSKLNLEDSGMYQCVAENK 402

Query: 387 LDFIEAQATLTVQV 400
              I A A L VQ 
Sbjct: 403 HGTIYASAELAVQA 416



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 152/654 (23%), Positives = 239/654 (36%), Gaps = 75/654 (11%)

Query: 88  SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
           +L I     SD G+Y+C      + S     +K   ++L+     L AP      P    
Sbjct: 193 NLYIARTNASDLGNYSCLATSHLDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPPETY 252

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + VT EC A G P P I W      +S     P+       + I ++   D G Y 
Sbjct: 253 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-----PQWGTAEPTLQIPSVSFEDEGTYE 307

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V A  PE  +   D     G  +   C   G P+P V W+ N 
Sbjct: 308 CEAENSKGRDTVQGRIIVQAQ-PEWLKVISDTEADIGSNLRWGCAAAGKPRPMVRWLRNG 366

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
           + L       +  GDL+ + +   DSG Y C A NK GT   S  L V+         P 
Sbjct: 367 EPLASQNRVEVLAGDLRFSKLNLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRQNPV 426

Query: 316 DYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
              + A  G   +  C   + P  K +I+W +G+E +   +  R   + D +L +   S 
Sbjct: 427 RRLIPAARGGEISIPCQPRAAP--KATILWSKGTEILGNST--RVTVTLDGTLIIRNISR 482

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APS--------NFTLIQVIDAKKAVV- 421
            D G+YTC A+  +    +   L+V+   +   APS        N TL Q   +    + 
Sbjct: 483 SDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGDNLTL-QCHASHDPTMD 541

Query: 422 ---SWN----PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
              +W     PV      GH+R   V+   E  G+ +I    +  G + T      V  +
Sbjct: 542 LTFTWTLDDFPVDFDKPGGHYRRASVK---ETIGDLTILNAQLRHGGTYTCMAQTVVDGA 598

Query: 475 KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
              A VL                            +    +G +   L W +    +  +
Sbjct: 599 SKEATVLVRGPPG------------------PPGGVVVRDIGDTTVQLSWSRGFDNHSPI 640

Query: 535 MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
             Y ++ ++    K   +    P   +    +A++ GL P   Y   ++     G G  S
Sbjct: 641 AKYTLQARTPPSGKWKQVRTN-PVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPS 699

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P  + G G  P  L I+WT M     N   F Y + +RR  +  
Sbjct: 700 GPSSRIRTKEAVPSVAPSGLSGGGGAPGELTINWTPMSREYQNGDGFGYLLSFRRQGS-S 758

Query: 649 AWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
           +W    V        V +N     + P+E+K+       DG  S+  ++ +  E
Sbjct: 759 SWQTARVPGADTQYFVYSNDSIHPYTPFEVKIRSYNRRGDGPESLTAIVYSAEE 812



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 144/611 (23%), Positives = 230/611 (37%), Gaps = 78/611 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P+   +R+        L    +   D G Y C   N  G   
Sbjct: 350 CAAAGKPRPMVRWLRNGEPLASQNRVEV--LAGDLRFSKLNLEDSGMYQCVAENKHGTIY 407

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F   P    I AA    ++  C+    P+  I W    + +  +  
Sbjct: 408 A-SAELAVQALAPDFRQNPVRRLIPAARGGEISIPCQPRAAPKATILWSKGTEILGNST- 465

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V  +  + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 466 --RVTVTLDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 522

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G  + L C     P  ++ +     +        GG Y   ++ ET GDL I +    
Sbjct: 523 NVGDNLTLQCHASHDPTMDLTFTWTLDDFPVDFDKPGGHYRRASVKETIGDLTILNAQLR 582

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE-----DYEVEAGQS---------AT 326
             G YTC A+  +  A    ++ V+               D  V+   S         A 
Sbjct: 583 HGGTYTCMAQTVVDGASKEATVLVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAK 642

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQYT 380
           +   A + PS K   V    + P++ E      Q        DY   V+ S+ L +G+ +
Sbjct: 643 YTLQARTPPSGKWKQV---RTNPVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPS 699

Query: 381 ---CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRG 437
               R +T+      +A  +V     +       ++       ++W P+S +   G   G
Sbjct: 700 GPSSRIRTK------EAVPSVAPSGLSGGGGAPGEL------TINWTPMSREYQNGDGFG 747

Query: 438 YKVQTWTEKDGEGSIRELIVNKGESTTTEV---DKFVPASKNFARVLAFNGAYNGPPSEI 494
           Y +     + G  S +   V  G  T   V   D   P +    ++ ++N   +GP S  
Sbjct: 748 YLLSF--RRQGSSSWQTARV-PGADTQYFVYSNDSIHPYTPFEVKIRSYNRRGDGPESLT 804

Query: 495 ISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKGTKVGPL 552
               + E  P    + + A    SS   + W    Q  NG+L+GY+I+Y      +    
Sbjct: 805 AIVYSAEEEPKVAPAKVWAKGSSSSEMNVSWEPVLQDMNGILLGYEIRYWKAGDKEAAAD 864

Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRG 612
             R   +     +SA++ GL P+TKY + +  Y +AG G  S     +  K P       
Sbjct: 865 RVRTAGLD----SSARVTGLYPNTKYHVTVRAYNRAGTGPASPSADAMTMKPPPR----- 915

Query: 613 STPNNLVISWT 623
             P N  ISWT
Sbjct: 916 RPPGN--ISWT 924



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 119/308 (38%), Gaps = 30/308 (9%)

Query: 115 SYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           S+S        P F  +P    F   + E+ VT  C+A   P     W  NG  ++  P 
Sbjct: 28  SFSQGTPATFGPVFEEQPVGLLFPEESAEDQVTLACRARASPPATYRWKMNGTEMNLEPG 87

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-T 230
           +  + +G N + +   +  D G Y C A+N +G V     V       E ++  +D   T
Sbjct: 88  SRHQLMGGNLVIMSPTKAQDAGVYQCLASNPVGTVVSKEAVLRFGFLQEFSKEERDPVKT 147

Query: 231 VDGKTVVLTCRVFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEY 285
            +G  V+L C      P     W+ N+      T GR+ + + TG+L I     +D G Y
Sbjct: 148 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 207

Query: 286 TCFARNKLGTAQGSGSLTVKEHTHITDQ-------------PEDYEVEAGQSATFRCNAV 332
           +C A + L  +  S      +     +              PE Y +  GQ  T  C A 
Sbjct: 208 SCLATSHLDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPPETYAL-VGQQVTLECFAF 266

Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
            +P  +  I W +    +D    P++  + + +L +   S  D G Y C A+        
Sbjct: 267 GNPVPR--IKWRK----VDGSLSPQW-GTAEPTLQIPSVSFEDEGTYECEAENSKGRDTV 319

Query: 393 QATLTVQV 400
           Q  + VQ 
Sbjct: 320 QGRIIVQA 327


>gi|198467771|ref|XP_002133856.1| GA27700 [Drosophila pseudoobscura pseudoobscura]
 gi|198146100|gb|EDY72483.1| GA27700 [Drosophila pseudoobscura pseudoobscura]
          Length = 2227

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 175/677 (25%), Positives = 276/677 (40%), Gaps = 97/677 (14%)

Query: 36  QYVTRKKEVALRNKK--VELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGN--YGKSL 89
           + + R ++V ++     +EL CI    PL +  TIW KDG+ ++ +      N  + ++L
Sbjct: 266 EIIVRPQDVKVKTGTGVLELQCIANARPLHELETIWLKDGLAVDTAGVRHTLNDPWNRTL 325

Query: 90  IIKHVEFSDQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAE-EETVTFE 146
            +     S  G YTC+V   +G     S S  + +L  P F          E    V   
Sbjct: 326 ALLQANSSHSGEYTCQVRLRSGGYPTVSASARVQILEPPVFFTPMRAETFGEFGGQVQLP 385

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVG-PNRITIENLRKSDTGNYGCNATNSLGY 205
           C   G P P++ W  N + +     + R  +G  N + I+ L   D   + C A N  G 
Sbjct: 386 CDVVGEPTPQVEWFRNAESVEANVQSGRYSLGEDNTLIIKKLILDDAAMFQCLARNEAGE 445

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT--GGR 263
                ++ V   AP   + P++   +DGK   ++CR  G+P P V WI+N+ +L     R
Sbjct: 446 NSASTWLRVKTSAPVFEQPPQNVTALDGKDATISCRAIGSPNPNVTWIYNETQLVEISSR 505

Query: 264 YTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQ 323
             ILE+GDL I+++  +D+G Y C   N+ G+ +G   L+V   T I   P D  V  G 
Sbjct: 506 VQILESGDLLISNIRPSDAGLYICVRANEAGSVKGEALLSVLVRTQIIQPPVDTIVLLGL 565

Query: 324 SATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +AT +C   SDPS+  +I W R  +     +  R     D  L +      D G Y+C  
Sbjct: 566 TATLQCKVSSDPSVPYNIDWYREGQMAPISNSQRIGVQADGQLEIQAVRASDVGSYSCVV 625

Query: 384 QTELDFIEAQATLTV-QVPLEAPSNFTLIQVIDAKKAV--VSWNPVSPQSLRGHFRGYKV 440
            +        A L+V ++P   PSN  + ++ + ++    VSW P           G+  
Sbjct: 626 TSPGGNETRAARLSVIELPF-PPSNVRVERLPEPQQRSINVSWTP-----------GF-- 671

Query: 441 QTWTEKDGEGSIRELIVNKGESTTTEVDKFV----------------------------- 471
                 DG   I + I+ + E   +E++KFV                             
Sbjct: 672 ------DGNSPISKFIIQRRE--VSELEKFVGPVPDPLLNWITELSNVSANQRWILLENL 723

Query: 472 -PASKNFARVLAFNGAYNGPPSEIISFV-----TPEGVP-GTVQSLEAIPLGSSAFYLKW 524
             A+    RV A N    G PSE  + V      P G P G V S  ++    S    +W
Sbjct: 724 KAATVYQFRVSAINRVGEGSPSEPSNVVELPQEAPSGPPVGFVGSARSM----SEIITQW 779

Query: 525 VKP--EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK----LAGLEPSTKY 578
             P  E  NG ++GY ++Y+      V       P+     T  A+    +  L     Y
Sbjct: 780 QPPQEEHRNGQILGYILRYRLFGYNNV-------PWSYQNITNEAQRNFLIQELITWKDY 832

Query: 579 RIHLAGYTKAG-----DGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAP 633
            + +A +   G     +GA+ K    VP   P NV+ +        I+W      + N  
Sbjct: 833 IVQIAAFNNMGVGVYTEGAKIKTKEGVPEAPPTNVQVKAINSTAAQITWKPPNPQQINGI 892

Query: 634 HFKYRI--FWRRHNTGE 648
           +  Y+I  + RRH  GE
Sbjct: 893 NQGYKIQAWQRRHVDGE 909



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 138/609 (22%), Positives = 242/609 (39%), Gaps = 68/609 (11%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPINP---SDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           +V+L C   G P PQ  W ++   +     S R S G    +LIIK +   D   + C  
Sbjct: 381 QVQLPCDVVGEPTPQVEWFRNAESVEANVQSGRYSLGE-DNTLIIKKLILDDAAMFQCLA 439

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPI 166
            N  GE  + +      +AP F   P+ + A + +  T  C+A G P P + W++N   +
Sbjct: 440 RNEAGENSASTWLRVKTSAPVFEQPPQNVTALDGKDATISCRAIGSPNPNVTWIYNETQL 499

Query: 167 SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
            +      + +    + I N+R SD G Y C   N  G V  +  ++VL    +I + P 
Sbjct: 500 VEISSR-VQILESGDLLISNIRPSDAGLYICVRANEAGSVKGEALLSVLVRT-QIIQPPV 557

Query: 227 DEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKEL---TGGRYTILETGDLKITDVAFAD 281
           D   + G T  L C+V   P     ++W    +        R  +   G L+I  V  +D
Sbjct: 558 DTIVLLGLTATLQCKVSSDPSVPYNIDWYREGQMAPISNSQRIGVQADGQLEIQAVRASD 617

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKE--------HTHITDQPEDYEVEAGQSATFRCNAVS 333
            G Y+C   +  G    +  L+V E              +P+   +    +  F  N+  
Sbjct: 618 VGSYSCVVTSPGGNETRAARLSVIELPFPPSNVRVERLPEPQQRSINVSWTPGFDGNS-- 675

Query: 334 DPSLKLSIVWLRGSEP-----------IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCR 382
            P  K  I     SE            +++ +E   V +N   + +         Q+   
Sbjct: 676 -PISKFIIQRREVSELEKFVGPVPDPLLNWITELSNVSANQRWILLENLKAATVYQFRVS 734

Query: 383 AQTEL-DFIEAQATLTVQVPLEAPSNFTLIQVIDAK---KAVVSWNPVSPQSLRGHFRGY 438
           A   + +   ++ +  V++P EAPS   +  V  A+   + +  W P   +   G   GY
Sbjct: 735 AINRVGEGSPSEPSNVVELPQEAPSGPPVGFVGSARSMSEIITQWQPPQEEHRNGQILGY 794

Query: 439 KVQ---------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
            ++          W+ ++        I N+ +     + + +       ++ AFN    G
Sbjct: 795 ILRYRLFGYNNVPWSYQN--------ITNEAQRNFL-IQELITWKDYIVQIAAFNNMGVG 845

Query: 490 PPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWV--KPEQPNGVLMGYKIK---YQS 543
             +E     T EGVP     +++   + S+A  + W    P+Q NG+  GYKI+    + 
Sbjct: 846 VYTEGAKIKTKEGVPEAPPTNVQVKAINSTAAQITWKPPNPQQINGINQGYKIQAWQRRH 905

Query: 544 VKGTKVG---PLLERLPYISDPTT-TSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY 599
           V G ++     ++   P + DP    S  L GL+   K+ + +  +T  GDG  S+ +  
Sbjct: 906 VDGEELDIERRMMTVPPSLIDPLAEQSTVLGGLDKFAKFNVTVLCFTDPGDGVASQMM-- 963

Query: 600 VPFKNPDNV 608
            P +  D+V
Sbjct: 964 -PVETLDDV 971



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 144/624 (23%), Positives = 243/624 (38%), Gaps = 116/624 (18%)

Query: 45   ALRNKKVELFCIFGGTPLPQTIWSKDGVP-INPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
            AL  K   + C   G+P P   W  +    +  S R+     G  L+I ++  SD G Y 
Sbjct: 470  ALDGKDATISCRAIGSPNPNVTWIYNETQLVEISSRVQILESGD-LLISNIRPSDAGLYI 528

Query: 104  CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEP--EIHWVH 161
            C  +N  G  K  ++ LSVL        P         T T +CK S  P     I W  
Sbjct: 529  CVRANEAGSVKGEAL-LSVLVRTQIIQPPVDTIVLLGLTATLQCKVSSDPSVPYNIDWYR 587

Query: 162  NGKPISQAPPNPRRKVG---PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA-- 216
             G+    AP +  +++G     ++ I+ +R SD G+Y C  T+  G   +   ++V+   
Sbjct: 588  EGQ---MAPISNSQRIGVQADGQLEIQAVRASDVGSYSCVVTSPGGNETRAARLSVIELP 644

Query: 217  ---------HAPEITE--------------APKDEYTVDGKTVVLTCRVFG-APKPEVNW 252
                       PE  +              +P  ++ +  + V    +  G  P P +NW
Sbjct: 645  FPPSNVRVERLPEPQQRSINVSWTPGFDGNSPISKFIIQRREVSELEKFVGPVPDPLLNW 704

Query: 253  IHNQKELTGG-RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT 311
            I     ++   R+ +LE  +LK   V      ++   A N++G  +GS S    E +++ 
Sbjct: 705  ITELSNVSANQRWILLE--NLKAATVY-----QFRVSAINRVG--EGSPS----EPSNVV 751

Query: 312  DQPEDYEVEAGQSATFRCNAVSDPSL--------------KLSIVWLR------GSEPID 351
            + P+  E  +G    F  +A S   +              ++    LR       + P  
Sbjct: 752  ELPQ--EAPSGPPVGFVGSARSMSEIITQWQPPQEEHRNGQILGYILRYRLFGYNNVPWS 809

Query: 352  FESEPRFVQSN----------DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            +++     Q N          DY + +   + +  G YT          E     T +  
Sbjct: 810  YQNITNEAQRNFLIQELITWKDYIVQIAAFNNMGVGVYT----------EGAKIKTKEGV 859

Query: 402  LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK--DGEGSIRE----- 454
             EAP     ++ I++  A ++W P +PQ + G  +GYK+Q W  +  DGE    E     
Sbjct: 860  PEAPPTNVQVKAINSTAAQITWKPPNPQQINGINQGYKIQAWQRRHVDGEELDIERRMMT 919

Query: 455  ----LIVNKGESTTT--EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ 508
                LI    E +T    +DKF   +K    VL F    +G  S+++   T + VP  + 
Sbjct: 920  VPPSLIDPLAEQSTVLGGLDKF---AKFNVTVLCFTDPGDGVASQMMPVETLDDVPDEIT 976

Query: 509  SLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP-LLERLPYISDPTTTSA 567
            +L    +   +  + W  P   NGVL GY ++YQ     K  P  ++     +D    + 
Sbjct: 977  ALHFDDVSDRSVKVLWAPPRFANGVLTGYTVRYQ----VKDHPETMKSFNLTADDNELTV 1032

Query: 568  KLAGLEPSTKYRIHLAGYTKAGDG 591
                L+ +T Y   +  +T+ G G
Sbjct: 1033 N--QLQATTHYWFEVCAWTRVGSG 1054



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 121/304 (39%), Gaps = 29/304 (9%)

Query: 125 APYFTVEPEFINA--AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
           AP FT  P    +  +E  T   +C A G P+P   W+ +GKP+     +   +      
Sbjct: 75  APRFTTHPSSSGSIVSEGSTKILQCHALGYPQPTYRWLKDGKPVGDFSSSQFYR------ 128

Query: 183 TIENLRKSDTGNYGCNATNSLGYVY---KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLT 239
              + R+ D G+Y C A N  G ++    DV V  +     +TE       V G   +  
Sbjct: 129 -FHSTRREDAGSYQCIAKNDAGSIFSEKSDVVVAYMGIFENVTEG--RLTVVSGHPAIFD 185

Query: 240 C-RVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADSGEYTCFARN-KLGTA 296
              +   P P V W      L    +Y   +   L I  V   D   Y   A N +LG  
Sbjct: 186 MPAIESVPTPSVLWQSADGSLNYDIKYAFTQANQLIILSVDENDRKGYRARAINTQLGKE 245

Query: 297 Q--------GSGSLTVKEHTHITDQPEDYEVEAGQSAT-FRCNAVSDPSLKLSIVWLRGS 347
           +         SG   ++    I  +P+D +V+ G      +C A + P  +L  +WL+  
Sbjct: 246 EISAFVHLNVSGDPYIEVAPEIIVRPQDVKVKTGTGVLELQCIANARPLHELETIWLKDG 305

Query: 348 EPIDFESEPRFVQSN-DYSLTVTKSSELDSGQYTCRAQTEL-DFIEAQATLTVQVPLEAP 405
             +D       +    + +L + +++   SG+YTC+ +     +    A+  VQ+ LE P
Sbjct: 306 LAVDTAGVRHTLNDPWNRTLALLQANSSHSGEYTCQVRLRSGGYPTVSASARVQI-LEPP 364

Query: 406 SNFT 409
             FT
Sbjct: 365 VFFT 368



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 96/398 (24%), Positives = 154/398 (38%), Gaps = 43/398 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH--VEFSDQGSYTCEVSNGV 110
           L C   G P P   W KDG P+        G++  S   +       D GSY C   N  
Sbjct: 97  LQCHALGYPQPTYRWLKDGKPV--------GDFSSSQFYRFHSTRREDAGSYQCIAKNDA 148

Query: 111 GEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKA-SGLPEPEIHWVHNGKPISQ 168
           G   S   D+ V     F  V    +         F+  A   +P P + W      ++ 
Sbjct: 149 GSIFSEKSDVVVAYMGIFENVTEGRLTVVSGHPAIFDMPAIESVPTPSVLWQSADGSLNY 208

Query: 169 APPNPRRKVGPNRITIENLRKSDTGNYGCNATNS-LGY--VYKDVYVNV-----LAHAPE 220
                  +   N++ I ++ ++D   Y   A N+ LG   +   V++NV     +  APE
Sbjct: 209 DIKYAFTQA--NQLIILSVDENDRKGYRARAINTQLGKEEISAFVHLNVSGDPYIEVAPE 266

Query: 221 ITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVN--WIHN--QKELTGGRYTILETGD--LK 273
           I   P+D     G  V+ L C     P  E+   W+ +    +  G R+T+ +  +  L 
Sbjct: 267 IIVRPQDVKVKTGTGVLELQCIANARPLHELETIWLKDGLAVDTAGVRHTLNDPWNRTLA 326

Query: 274 ITDVAFADSGEYTCFARNKLG---TAQGSGSLTVKE-HTHITDQPEDYEVEAGQSATFRC 329
           +     + SGEYTC  R + G   T   S  + + E     T    +   E G      C
Sbjct: 327 LLQANSSHSGEYTCQVRLRSGGYPTVSASARVQILEPPVFFTPMRAETFGEFGGQVQLPC 386

Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEP-RFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
           + V +P+ ++   W R +E ++   +  R+    D +L + K    D+  + C A+ E  
Sbjct: 387 DVVGEPTPQVE--WFRNAESVEANVQSGRYSLGEDNTLIIKKLILDDAAMFQCLARNEAG 444

Query: 389 FIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVS 422
              A   L V+    V  + P N T    +D K A +S
Sbjct: 445 ENSASTWLRVKTSAPVFEQPPQNVT---ALDGKDATIS 479



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 85/205 (41%), Gaps = 22/205 (10%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            PL   +N T      +   VV W  + P    G   GYKV     + G   + + I N  
Sbjct: 1279 PLHVEANAT-----SSTTVVVRWGEIPPHHRNGQIDGYKVYYAATERGMQVLYKTIPNNS 1333

Query: 461  ESTT--TEVDKFVPASKNFARVLAF----NGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
              TT  TE+ KFV       +VLA+    NGA + PP  + +F   E  PG+  ++    
Sbjct: 1334 SFTTTLTELQKFV---VYHVQVLAYTRLGNGALSTPPIRVQTF---EDTPGSPSNVSFPD 1387

Query: 515  LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
            +  S   + W  P  PNG ++ Y++ Y ++ G+         P    P+  + +  GL P
Sbjct: 1388 VTFSMARIIWDVPMDPNGEILAYQVTY-TLNGSANLNYSREFP----PSDRTFRATGLMP 1442

Query: 575  STKYRIHLAGYTKAGDGAESKYLFY 599
               Y   +   T+ G G  +  L Y
Sbjct: 1443 ERYYSFSVTAQTRLGWGKTASVLVY 1467



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 71/154 (46%), Gaps = 12/154 (7%)

Query: 480  VLAFNGAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMG 536
            VL FN    GP +   +    E VP G  + ++A  + S+   L+W  P+Q   NG ++G
Sbjct: 1658 VLPFNSQGPGPATPPTAVYVGEAVPTGEPRGVDATAISSTEVRLRWKPPKQSSQNGEILG 1717

Query: 537  YKIKYQ---SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
            YKI Y    S +  + G   E    +   T TS  L  L+  T+YRI L  +  AGDG  
Sbjct: 1718 YKIFYLVTWSPQALEPGRKFEEEIEVVSATATSHSLVFLDKFTEYRIQLLAFNPAGDGPR 1777

Query: 594  S-----KYLFYVPFKNPDNVEGRGSTPNNLVISW 622
            S     K +  VP   P N+     T  +L ++W
Sbjct: 1778 SAPVTVKTMPGVP-SAPLNLRFSDITMQSLEVTW 1810



 Score = 44.7 bits (104), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 12/141 (8%)

Query: 414  IDAKKAVVSWNPVSPQSLRGHFRGYKV---QTWTEKD---GEGSIRELIVNKGESTTTEV 467
            I + +  + W P    S  G   GYK+    TW+ +    G     E+ V    +T+  +
Sbjct: 1694 ISSTEVRLRWKPPKQSSQNGEILGYKIFYLVTWSPQALEPGRKFEEEIEVVSATATSHSL 1753

Query: 468  ---DKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW 524
               DKF   ++   ++LAFN A +GP S  ++  T  GVP    +L    +   +  + W
Sbjct: 1754 VFLDKF---TEYRIQLLAFNPAGDGPRSAPVTVKTMPGVPSAPLNLRFSDITMQSLEVTW 1810

Query: 525  VKPEQPNGVLMGYKIKYQSVK 545
              P+  NG ++GY + Y++ +
Sbjct: 1811 DPPKLLNGEIVGYLVTYETTE 1831



 Score = 43.5 bits (101), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 56/262 (21%), Positives = 106/262 (40%), Gaps = 19/262 (7%)

Query: 392  AQATLTVQVPLEAPSNFTLIQVIDA--KKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE 449
            A   + V+   + P   T +   D   +   V W P  P+   G   GY V+ +  KD  
Sbjct: 959  ASQMMPVETLDDVPDEITALHFDDVSDRSVKVLWAP--PRFANGVLTGYTVR-YQVKDHP 1015

Query: 450  GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP--SEIISFVTPEGVPGTV 507
             +++   +   ++  T V++    +  +  V A+    +GPP  + I S V P  +P   
Sbjct: 1016 ETMKSFNLTADDNELT-VNQLQATTHYWFEVCAWTRVGSGPPKTATIQSGVEPV-LPHAP 1073

Query: 508  QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSA 567
             +L    + + +  L++      N  +  +K++ Q+ +      + E    ISDP   + 
Sbjct: 1074 TTLALSNIEAFSVVLQFTPGFDGNSSITKWKVEAQTARNMTWFTICE----ISDPDAETL 1129

Query: 568  KLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVIS 621
             + GL P T+YR+ L+     G    S      + +   P   P NV  R  +   L + 
Sbjct: 1130 TVTGLMPFTQYRLRLSATNVVGSSRPSDPTKDFQTIQAKPMHAPFNVTVRAMSALQLRVR 1189

Query: 622  WTAMPEIEHNAPHFKYRIFWRR 643
            W  + ++E       Y + +R+
Sbjct: 1190 WIPLQQMEWFGNPRGYNVTYRQ 1211


>gi|355559497|gb|EHH16225.1| hypothetical protein EGK_11478 [Macaca mulatta]
          Length = 1225

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 178/712 (25%), Positives = 290/712 (40%), Gaps = 68/712 (9%)

Query: 47  RNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           + K   L  +    P PQ  W+K G  + P  R ++ NYGK+L I++V + D+G+Y C  
Sbjct: 270 KGKPCCLSVLLKAWPTPQVDWNKIGGDL-PKGRETKENYGKTLKIENVSYQDKGNYRCTA 328

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPI 166
           SN +G A ++   + V   P +T +P+    +        C+A G P+P I W  NG PI
Sbjct: 329 SNFLGTA-THDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSPI 387

Query: 167 SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
              P      V P  I+  NL+ + T  Y C A+N  G +     V+V+   P I     
Sbjct: 388 DNHP-FAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILASANVDVVDVRPLIQTKDG 446

Query: 227 DEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADSG 283
           + Y TV G +  L C  F +P+  V+W  +   K L G RY + + G L+I      D+G
Sbjct: 447 ENYATVVGYSAFLHCEFFASPEAVVSWQKVEEAKPLEGRRYHVYDNGTLQINRTTEEDAG 506

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LSI 341
            Y+C+  N +G    + +L ++  T +   P++  +         C +  D  LK  L +
Sbjct: 507 SYSCWVENAIGKTAVTANLDIRNATQLRVSPKNPRIPKLHMLELHCESKCDLHLKHSLKL 566

Query: 342 VWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
            W +  E  +   +E   +  +  +LT++  +  D G Y C A T LD       +TV  
Sbjct: 567 SWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLD 626

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
             + P N  L +  + +   +SW   +      +   Y V+    K+  G   EL   +G
Sbjct: 627 VPDPPENLHLSERQN-RSVRLSWE--AGDDHNSNISEYIVEFEGNKEDPGRWEELTRVQG 683

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGSS 518
           + TT  +    P  +   RV+A N      PS+      TP   P    Q++        
Sbjct: 684 KKTTV-ILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPK 742

Query: 519 AFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPST 576
              +KW  +K  + NG  + Y++ ++  +G  V           + T T+  L  + P+ 
Sbjct: 743 EMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPAV 793

Query: 577 --KYRIHLAGYTKAGDG-AESKYLFYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEIE 629
              Y + +    + G G A      Y     PD    + G     + LV ++W+ +P+  
Sbjct: 794 YAPYDVKVQAINQLGSGPAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDR 853

Query: 630 HNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEG 689
            +     Y+I W        W    +LD R             P E+ V++         
Sbjct: 854 VHGRLKGYQINW--------WKTKSLLDGRT-----------HPKEVNVLRF-------- 886

Query: 690 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                    G+  +  V      S+    VLA+N    GP SE   F TPEG
Sbjct: 887 --------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTPEG 930



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 131/573 (22%), Positives = 227/573 (39%), Gaps = 47/573 (8%)

Query: 53   LFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L C F  +P     W K  +  P+    R    + G +L I      D GSY+C V N +
Sbjct: 459  LHCEFFASPEAVVSWQKVEEAKPLE-GRRYHVYDNG-TLQINRTTEEDAGSYSCWVENAI 516

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASG----LPEPEIHWVHNGKPI 166
            G+  + + +L +  A    V P+     +   +   C++          ++ W  +G+  
Sbjct: 517  GKT-AVTANLDIRNATQLRVSPKNPRIPKLHMLELHCESKCDLHLKHSLKLSWSKDGEAF 575

Query: 167  S-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
                  + R  +    +TI N+   D G Y C+A  +L        V VL    ++ + P
Sbjct: 576  EINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVL----DVPDPP 631

Query: 226  KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG-----GRYTILETGDLKITDVAFA 280
            ++ +  + +   +            N      E  G     GR+  L     K T V   
Sbjct: 632  ENLHLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEDPGRWEELTRVQGKKTTVILP 691

Query: 281  DSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSAT-------F 327
             +     ++   A N++G +Q S      E         P++  V+A Q           
Sbjct: 692  LAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPL 751

Query: 328  RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            +    + P L+  + W     P+++E E       +++L V   +         +A  +L
Sbjct: 752  KSMEQNGPGLEYRVTWKPQGAPVEWEEE----TVTNHTLRVMTPAVYAPYDVKVQAINQL 807

Query: 388  DFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWT 444
                A  ++T+    + P    +I    VI++    V+W+ +    + G  +GY++  W 
Sbjct: 808  GSGPAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQINWWK 867

Query: 445  EK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
             K   DG    +E+ V +  G+  +  V      S+    VLA+N    GP SE   F T
Sbjct: 868  TKSLLDGRTHPKEVNVLRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQT 927

Query: 500  PEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERLPY 558
            PEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T ++G L +    
Sbjct: 928  PEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGNLTGYLLQYQIINDTYEIGELNDI--N 985

Query: 559  ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            I+ P+  S  L+ L  +TKY+ +L   T  G G
Sbjct: 986  ITTPSKPSWHLSNLNATTKYKFYLRACTSRGCG 1018



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 162/415 (39%), Gaps = 62/415 (14%)

Query: 67  WSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSNGVGEAKSYSIDLSV- 122
           W+KDG P + +D   I+  N G   I      S  QG Y C  SN +G A S  I+  V 
Sbjct: 69  WTKDGNPFHFTDHRIITSNNSGTFRIPNEGHISHFQGKYRCFASNKLGIAMSEEIEFIVP 128

Query: 123 LAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKPISQAPPNPRRKVGP 179
              P F  E  + +   E + +   C    GLP   I+W++   + I Q       + G 
Sbjct: 129 TGVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEHIEQDERVYMSQKG- 187

Query: 180 NRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA--------------- 218
             +   N+ + D+ N Y C A        +  +   + VN L HA               
Sbjct: 188 -DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHANDSSSSTEIGSKANS 246

Query: 219 -----PEITEAPKDE-----YTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE 268
                P++   P +      +   GK   L+  +   P P+V+W     +L  GR T   
Sbjct: 247 IKQRKPKLLLPPTESGRGGFFKKKGKPCCLSVLLKAWPTPQVDWNKIGGDLPKGRETKEN 306

Query: 269 TGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
            G  LKI +V++ D G Y C A N LGTA     + V+E    T +P+      G +   
Sbjct: 307 YGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKKPQSAVYSTGSNGIL 366

Query: 328 RCNAVSDPSLKLSIVWLRGSEPID---------FESEPRF--VQSNDYSLTVTKSSELDS 376
            C A  +P  + +I W     PID         F  E  F  +Q N  ++   ++S +  
Sbjct: 367 LCEAEGEP--QPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHG 424

Query: 377 GQYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDAKKAVVSWNPV 426
              T  A   +D ++ +  +  +       +   S F   +   + +AVVSW  V
Sbjct: 425 ---TILASANVDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV 476


>gi|350529383|ref|NP_001129635.2| L1 cell adhesion molecule precursor [Xenopus laevis]
          Length = 1246

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 188/391 (48%), Gaps = 17/391 (4%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSD---RISQGNYGKSLIIKHVEFSDQG 100
           +ALR++ ++L CI  G P P+  W    +P+  S     I   ++ K+L I  V+  D G
Sbjct: 251 LALRDQPLQLECIAEGLPTPEIEW----IPLTGSTTNGHIQYDDFKKTLHIDKVQDDDDG 306

Query: 101 SYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV 160
            Y C   N  G A +++  + V +APY+  +P     A  E +   C+  G P+P++ W 
Sbjct: 307 DYQCTAKNTQGTA-THTFTVVVESAPYWINKPMDGIYAPGEDIILHCEVGGKPKPKVTWK 365

Query: 161 HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
            NG  +  +      K+    + + N++ +DT    C A N  G +  + +V V+   P+
Sbjct: 366 INGASLKDSDLYHNWKLSEGSLVLNNMQLNDTSVVQCEARNKHGNLLANAFVYVVELPPQ 425

Query: 221 ITEAPKDEYTVDGKT-VVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDV 277
           I     ++Y+V  KT V + C+ FGAP P++ W  +Q++  L   +++    G L IT V
Sbjct: 426 ILTKNDEQYSVVEKTNVSMDCKTFGAPMPKIQWDRDQEDNLLALDQFSFHTNGTLTITGV 485

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
                G Y C A N  G    S  L V+  T I   P +     G  A F+C    DP +
Sbjct: 486 VKEHEGIYWCTASNNQGNVNISAYLDVRNATKIISPPMEQRARKGGKAIFQCTVEFDPKM 545

Query: 338 KLSIV-WLRGSEPI--DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
              I+ W +    I  D +++  F++  DY+L+++   E D G YTC A++ELD +E  A
Sbjct: 546 SSKIIDWKKNGLEINEDPDNDKYFIE--DYTLSISNVQEGDQGMYTCLARSELDSVEQTA 603

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            L V    E+PS+  L    +     ++W P
Sbjct: 604 ELVVIDLPESPSDLELSNAQET-SITLTWTP 633



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 141/587 (24%), Positives = 225/587 (38%), Gaps = 52/587 (8%)

Query: 36  QYVTRKKE--VALRNKKVELFCIFGGTPLPQTIWSKDGVP-INPSDRISQGNYGKSLIIK 92
           Q +T+  E    +    V + C   G P+P+  W +D    +   D+ S    G +L I 
Sbjct: 425 QILTKNDEQYSVVEKTNVSMDCKTFGAPMPKIQWDRDQEDNLLALDQFSFHTNG-TLTIT 483

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGL 152
            V    +G Y C  SN  G   + S  L V  A      P    A +     F+C     
Sbjct: 484 GVVKEHEGIYWCTASNNQGNV-NISAYLDVRNATKIISPPMEQRARKGGKAIFQCTVEFD 542

Query: 153 PEPE---IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           P+     I W  NG  I++ P N +  +    ++I N+++ D G Y C A + L  V + 
Sbjct: 543 PKMSSKIIDWKKNGLEINEDPDNDKYFIEDYTLSISNVQEGDQGMYTCLARSELDSVEQT 602

Query: 210 VYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-----RVFGAPKPEVNWIHNQKELTGGRY 264
             + V+    ++ E+P D    + +   +T          +P  E      +     G +
Sbjct: 603 AELVVI----DLPESPSDLELSNAQETSITLTWTPGNENNSPIEEFIIEFEEDSFEPGVW 658

Query: 265 TILE--TGDLKITDVAFAD--SGEYTCFARNKLGTAQGSG---------SLTVKEHTHIT 311
             L    GD+  TD+  +   + ++   A N++G + GS          S   K    + 
Sbjct: 659 HELTRVDGDMVTTDLNLSPYVNYQFRVIAVNEVGPSNGSNPSDRYRTPPSAPTKNPEEVK 718

Query: 312 DQ---PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
            +   PE+ ++          N    P  K  + W R  +  D+  E     +    + V
Sbjct: 719 GEGTVPENMKISWKPLKGIDWNG---PDFKYLVKWRRLGKD-DWREE----VAESPPVIV 770

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVS 422
           T++S  +   Y    Q+  D   A     +        P  +P N  L + ++     V+
Sbjct: 771 TETSTFEP--YEIIVQSVNDLGRASEPKPIIGHSGEDFPDISPENVGL-EAMNESAIKVA 827

Query: 423 WNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLA 482
           W PV  Q L GH +G+ V   +        +EL V+ G +T   +    P S     V  
Sbjct: 828 WLPVQKQGLNGHLKGFMVYYISHSSRHRQTKELRVH-GNTTHALITGLKPFSNYSVEVAI 886

Query: 483 FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
            NG   G  SE     T EGVP     L       ++  L W  PE PNG+L GY+I +Q
Sbjct: 887 MNGKGPGDRSESRMIRTDEGVPSPPSFLHLERQSDTSLTLIWGPPETPNGILTGYEIYHQ 946

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
            V  T +G        I+DPT  +  L+ +     YR +L   T  G
Sbjct: 947 IVNKTHMGAKYFS-ETINDPTQQNWTLSNISSKDTYRFYLYATTSVG 992



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 128/326 (39%), Gaps = 33/326 (10%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSD--RISQGNYGKSLIIKHVE---F 96
           K V   N  + L C        +  W KDG    P D   +++     S+II +      
Sbjct: 44  KYVVYPNDDIVLKCEAKRNAKVKYTWKKDGETFAPEDGPSVNRKKDSGSIIISNGNGNAM 103

Query: 97  SD-QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK--ASGL 152
            D QG Y C  +N +G A S+ I +   + P +  E    I   E  ++   C    S +
Sbjct: 104 KDFQGKYRCYATNELGTAISHEIHVITESTPKWQKEMIRPIEVEEGSSLILPCNPPKSAV 163

Query: 153 PEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTG-NYGCNA--TNSLGYVYK 208
           P P + W+++   +     + R  +G N  +   N++K D   +Y C+A    +   V K
Sbjct: 164 P-PRVIWMNSS--LLHITQDKRVSMGVNGNLYFSNVQKQDEHPDYICHAQFVGARTIVQK 220

Query: 209 DVYV-------NVLAHAPEITEAPKDEYTV---DGKTVVLTCRVFGAPKPEVNWIHNQKE 258
           +          +V    PE+        TV     + + L C   G P PE+ WI     
Sbjct: 221 EAISIKVRPTNSVKFRRPEMMLPEGSMSTVLALRDQPLQLECIAEGLPTPEIEWIPLTGS 280

Query: 259 LTGGRYTILETGDLK----ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
            T G    ++  D K    I  V   D G+Y C A+N  GTA  + ++ V+   +  ++P
Sbjct: 281 TTNGH---IQYDDFKKTLHIDKVQDDDDGDYQCTAKNTQGTATHTFTVVVESAPYWINKP 337

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLS 340
            D     G+     C     P  K++
Sbjct: 338 MDGIYAPGEDIILHCEVGGKPKPKVT 363


>gi|322789992|gb|EFZ15068.1| hypothetical protein SINV_01431 [Solenopsis invicta]
          Length = 2135

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 166/609 (27%), Positives = 255/609 (41%), Gaps = 60/609 (9%)

Query: 55  CIFGGTPLPQ--TIWSKDGVPINPSDRIS---QGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           CI     L +  T+W KDG+PI  S RIS     ++ ++L +     +  G Y+C V   
Sbjct: 217 CIANARSLHELRTLWMKDGIPIENS-RISYSFNDSWNRTLALISANITYTGIYSCHVDLR 275

Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET-------VTFECKASGLPEPEIHWVHN 162
            G    Y I ++  A      +P FI   + ET       VT  C A+G+P P I W  N
Sbjct: 276 SG---GYPI-VNASAKIVVYEKPTFITELKRETLSDYGSTVTLPCDANGVPSPTITWFRN 331

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
            +P+               +TI+ L   D+G + C A+N  G      ++      P + 
Sbjct: 332 AEPVDHLLGTRYVIEEDGSLTIKKLTMDDSGMFQCLASNEAGESSSYTWLKAKTSGPIME 391

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK---ELTGGRYTILETGDLKITDVAF 279
             P++   +DGK   L+C    APKP   W +N     E+  GR  +L+ GDL I  V  
Sbjct: 392 NGPQNLTVLDGKDATLSCNAIAAPKPNATWYYNDMIPVEI-AGRVQVLDNGDLLIAAVKS 450

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
            D+G+YTC   N+ G+  GS  LTV   T I   P D  V  G++A  +C   +DPS+  
Sbjct: 451 YDAGKYTCIRANEAGSVNGSAYLTVMVRTQIIQPPVDTSVLLGRTAELQCKVSNDPSVVY 510

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV- 398
            + W    + I+ ++  R    +D +L +      D G+YTC   +        A L+V 
Sbjct: 511 DMAWFHNGQVINTQASQRVKMRSDGTLEIVTVRASDVGEYTCSVVSPGGNETRSARLSVI 570

Query: 399 QVPLEAPSNF--TLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGEGSIRE 454
           ++P   P N   T ++ I  +   V+W P       G+   + + VQ   E    G I +
Sbjct: 571 ELPF-PPINVVATRVERISPRTINVTWVP----GFDGNSPTKKFIVQR-REVSDLGPIHD 624

Query: 455 LIVN--------KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT-----PE 501
            I+N           S    ++    A+    RV A N    GP S   + V      P 
Sbjct: 625 PILNWVTERDNVSATSRWVLLNNLKAAASYQFRVSAENSVGEGPSSAASNIVVLPQEPPS 684

Query: 502 GVP-GTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
           G P G V S  +    SS    +W  P  E  NG ++GY ++Y ++ G    P    +  
Sbjct: 685 GPPIGFVGSARS----SSEIITQWQPPLEEYRNGHILGYILRY-TLFGYNDSPWT--MQN 737

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEGRGS 613
           I++    +  +  L     Y + +A Y + G G  SK L       VP   P NV+ +  
Sbjct: 738 ITNEAQRNYLITDLITWKDYEVQIAAYNEKGVGVYSKGLQIKTREGVPEAPPTNVKTKAV 797

Query: 614 TPNNLVISW 622
               + + W
Sbjct: 798 NSTAVKVWW 806



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 147/610 (24%), Positives = 235/610 (38%), Gaps = 69/610 (11%)

Query: 34  KQQYVTRKKEVALRN--KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GK 87
           K  ++T  K   L +    V L C   G P P   W ++  P+   D +    Y      
Sbjct: 293 KPTFITELKRETLSDYGSTVTLPCDANGVPSPTITWFRNAEPV---DHLLGTRYVIEEDG 349

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
           SL IK +   D G + C  SN  GE+ SY+   +  + P     P+ +   + +  T  C
Sbjct: 350 SLTIKKLTMDDSGMFQCLASNEAGESSSYTWLKAKTSGPIMENGPQNLTVLDGKDATLSC 409

Query: 148 KASGLPEPEIHWVHNGK-PISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGY 205
            A   P+P   W +N   P+  A    R +V  N  + I  ++  D G Y C   N  G 
Sbjct: 410 NAIAAPKPNATWYYNDMIPVEIAG---RVQVLDNGDLLIAAVKSYDAGKYTCIRANEAGS 466

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKEL---T 260
           V    Y+ V+    +I + P D   + G+T  L C+V   P    ++ W HN + +    
Sbjct: 467 VNGSAYLTVMVRT-QIIQPPVDTSVLLGRTAELQCKVSNDPSVVYDMAWFHNGQVINTQA 525

Query: 261 GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
             R  +   G L+I  V  +D GEYTC   +  G    S  L+V E            VE
Sbjct: 526 SQRVKMRSDGTLEIVTVRASDVGEYTCSVVSPGGNETRSARLSVIELPFPPINVVATRVE 585

Query: 321 AGQSATFRCNAV-----SDPSLKLSIVWLRGSEPIDFESEP--RFVQSNDYSLTVTKSSE 373
                T     V     + P+ K  IV  R    +    +P   +V   D     ++   
Sbjct: 586 RISPRTINVTWVPGFDGNSPTKKF-IVQRREVSDLGPIHDPILNWVTERDNVSATSRWVL 644

Query: 374 LD----SGQYTCRAQTELDFIE---AQATLTVQVPLEAPSNFTLIQVIDAKKA---VVSW 423
           L+    +  Y  R   E    E   + A+  V +P E PS   +  V  A+ +   +  W
Sbjct: 645 LNNLKAAASYQFRVSAENSVGEGPSSAASNIVVLPQEPPSGPPIGFVGSARSSSEIITQW 704

Query: 424 NPVSPQSLRGHFRGY--KVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 481
            P   +   GH  GY  +   +   D   +++  I N+ +      D  +       ++ 
Sbjct: 705 QPPLEEYRNGHILGYILRYTLFGYNDSPWTMQN-ITNEAQRNYLITD-LITWKDYEVQIA 762

Query: 482 AFNGAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWV--KPEQPNGVLMGYK 538
           A+N    G  S+ +   T EGVP     +++   + S+A  + W    P++ NG+  GYK
Sbjct: 763 AYNEKGVGVYSKGLQIKTREGVPEAPPTNVKTKAVNSTAVKVWWKPPNPQKINGINQGYK 822

Query: 539 I--------------KYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAG 584
           +              K  +V  +   PL E+          +  + GL   T+Y I +  
Sbjct: 823 LQAWIGGNFTEANEYKSMTVPPSLFDPLAEQ----------NTIMTGLRKYTQYNITVLC 872

Query: 585 YTKAGDGAES 594
           +T  GDG  S
Sbjct: 873 FTDPGDGERS 882



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 100/413 (24%), Positives = 165/413 (39%), Gaps = 54/413 (13%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           N+   L C   G P P+  W K+G+P+N  + ++ G Y +   I      D G Y C  +
Sbjct: 22  NRTKFLQCQARGNPQPKYKWFKNGMPLN--NELTSGPYFR---IHSTRREDAGVYHCVAT 76

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGL---------PEPEIH 158
           N VG   S  +  +V     F       +   E+ VT E  ++ +         P P++ 
Sbjct: 77  NDVGSIFSDRLAFAVAYMGTF-------DDLTEKVVTVESGSAAILELPPIESHPIPDVT 129

Query: 159 WV-HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS-LGYVYKDVYVNVLA 216
           W   +G P+       +     + + I N  ++D G Y   A N+ LG      +  +  
Sbjct: 130 WFSSDGTPLYGI----KYATTHHTLIILNASENDEGTYRAKAINTQLGKEEISPFFKLQV 185

Query: 217 H-------APEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVN--WIHNQKELTGGR--Y 264
                   AP I   P+D   V  + V  + C        E+   W+ +   +   R  Y
Sbjct: 186 TGDPNAEVAPTIIVKPQDTQIVKDQDVTHINCIANARSLHELRTLWMKDGIPIENSRISY 245

Query: 265 TILETGD--LKITDVAFADSGEYTCFARNKLG---TAQGSGSLTVKEH-THITDQPEDYE 318
           +  ++ +  L +       +G Y+C    + G       S  + V E  T IT+   +  
Sbjct: 246 SFNDSWNRTLALISANITYTGIYSCHVDLRSGGYPIVNASAKIVVYEKPTFITELKRETL 305

Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQ 378
            + G + T  C+A   PS   +I W R +EP+D     R+V   D SLT+ K +  DSG 
Sbjct: 306 SDYGSTVTLPCDANGVPS--PTITWFRNAEPVDHLLGTRYVIEEDGSLTIKKLTMDDSGM 363

Query: 379 YTCRAQTEL----DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVS 427
           + C A  E      +   +A  +  +    P N T   V+D K A +S N ++
Sbjct: 364 FQCLASNEAGESSSYTWLKAKTSGPIMENGPQNLT---VLDGKDATLSCNAIA 413



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 114/276 (41%), Gaps = 23/276 (8%)

Query: 123 LAAPYFTVEPEFIN--AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN 180
           L  P FT +P       +E  T   +C+A G P+P+  W  NG P+     N     GP 
Sbjct: 3   LQEPRFTNQPSSSGNILSENRTKFLQCQARGNPQPKYKWFKNGMPL-----NNELTSGP- 56

Query: 181 RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLT 239
              I + R+ D G Y C ATN +G ++ D     +A+     +  +   TV+ G   +L 
Sbjct: 57  YFRIHSTRREDAGVYHCVATNDVGSIFSDRLAFAVAYMGTFDDLTEKVVTVESGSAAILE 116

Query: 240 C-RVFGAPKPEVNWIHNQ-KELTGGRYTILETGDLKITDVAFADSGEYTCFARN-KLG-- 294
              +   P P+V W  +    L G +Y       L I + +  D G Y   A N +LG  
Sbjct: 117 LPPIESHPIPDVTWFSSDGTPLYGIKYATTH-HTLIILNASENDEGTYRAKAINTQLGKE 175

Query: 295 ------TAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT-FRCNAVSDPSLKLSIVWLRGS 347
                   Q +G    +    I  +P+D ++   Q  T   C A +    +L  +W++  
Sbjct: 176 EISPFFKLQVTGDPNAEVAPTIIVKPQDTQIVKDQDVTHINCIANARSLHELRTLWMKDG 235

Query: 348 EPIDFES-EPRFVQSNDYSLTVTKSSELDSGQYTCR 382
            PI+       F  S + +L +  ++   +G Y+C 
Sbjct: 236 IPIENSRISYSFNDSWNRTLALISANITYTGIYSCH 271



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 24/202 (11%)

Query: 403 EAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGES 462
           EAP      + +++    V W P +PQ + G  +GYK+Q W      G+  E   N+ +S
Sbjct: 786 EAPPTNVKTKAVNSTAVKVWWKPPNPQKINGINQGYKLQAWIG----GNFTE--ANEYKS 839

Query: 463 TTTEVDKFVPASKNFA-------------RVLAFNGAYNGPPSEIISFVTPEGVPGTVQS 509
            T     F P ++                 VL F    +G  S  +   T E VP  V++
Sbjct: 840 MTVPPSLFDPLAEQNTIMTGLRKYTQYNITVLCFTDPGDGERSSPVEIRTREDVPEEVEN 899

Query: 510 LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKL 569
           L+   +   A  +KW +P++ NG+L  Y++KY  +K       +E   + +D    S K+
Sbjct: 900 LQFEDISDRALTVKWNRPKETNGILTHYQLKYM-IKDIPDSLRVEN--FTAD--VLSTKV 954

Query: 570 AGLEPSTKYRIHLAGYTKAGDG 591
             L+  T Y+  +  +T  G G
Sbjct: 955 EHLQALTHYKFEVTAWTSVGPG 976



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 58/123 (47%), Gaps = 12/123 (9%)

Query: 480  VLAFNGAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWVKPE--QPNGVLMG 536
            VL FN    GPPS  ++    E VP G  Q L+A P+ S+   L+W  P+    NG L+G
Sbjct: 1573 VLPFNSEGEGPPSPPVTVYVGEAVPTGEPQYLKAEPISSTEVLLRWKPPQANMQNGDLLG 1632

Query: 537  YKIKYQSVKG-----TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            YKI Y           K    +E +P     +  +  L  L+  T+YRI +  +  AGDG
Sbjct: 1633 YKIFYLVTDSPQTLEKKQEEEIEVVP----ASCLTHNLVFLDKYTEYRIQVLAFNPAGDG 1688

Query: 592  AES 594
              S
Sbjct: 1689 PRS 1691



 Score = 44.7 bits (104), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 12/140 (8%)

Query: 414  IDAKKAVVSWNPVSPQSLRGHFRGYKV--------QTWTEKDGEGSIRELIVNKGESTTT 465
            I + + ++ W P       G   GYK+        QT  EK  E  I  +  +       
Sbjct: 1609 ISSTEVLLRWKPPQANMQNGDLLGYKIFYLVTDSPQT-LEKKQEEEIEVVPASCLTHNLV 1667

Query: 466  EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWV 525
             +DK+   ++   +VLAFN A +GP S  I+  T + +PG    L+   +  ++  + W 
Sbjct: 1668 FLDKY---TEYRIQVLAFNPAGDGPRSPPITARTKQDIPGPPYYLQFNEITMTSLRVSWK 1724

Query: 526  KPEQPNGVLMGYKIKYQSVK 545
             P+  NG ++GY + Y++ +
Sbjct: 1725 PPKLRNGEIVGYIVTYETAE 1744



 Score = 40.0 bits (92), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 26/190 (13%)

Query: 420  VVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTT-EVDKFVPASKNFA 478
            +V W  V  +   G   G+KV            + +  N   +TT  E+ KFV   +   
Sbjct: 1209 LVRWGDVPVEHQNGQIEGFKVYYGANSRSTFQYKNIPSNTTFTTTLTELRKFV---QYHV 1265

Query: 479  RVLAF----NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
            +VLA+    +GA + PP  + +F    G P  V S   + L ++   + W  PE PNG +
Sbjct: 1266 QVLAYTRLGDGALSIPPVRVQTFDDTPGSPSNV-SFPDVSLTTAR--IIWDTPEDPNGEI 1322

Query: 535  MGYKIKY-----QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
            + YK+ +     Q  + +K  P  +R          + +  GLE    Y   +   T+ G
Sbjct: 1323 LAYKVMFHLNSSQDRQFSKEFPASDR----------TFRATGLESEQYYMFSVTAQTRLG 1372

Query: 590  DGAESKYLFY 599
             G  +  L +
Sbjct: 1373 WGKTAYALVF 1382


>gi|49119255|gb|AAH73282.1| L1cam-a protein [Xenopus laevis]
          Length = 1225

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 188/391 (48%), Gaps = 17/391 (4%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSD---RISQGNYGKSLIIKHVEFSDQG 100
           +ALR++ ++L CI  G P P+  W    +P+  S     I   ++ K+L I  V+  D G
Sbjct: 230 LALRDQPLQLECIAEGLPTPEIEW----IPLTGSTTNGHIQYDDFKKTLHIDKVQDDDDG 285

Query: 101 SYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV 160
            Y C   N  G A +++  + V +APY+  +P     A  E +   C+  G P+P++ W 
Sbjct: 286 DYQCTAKNTQGTA-THTFTVVVESAPYWINKPMDGIYAPGEDIILHCEVGGKPKPKVTWK 344

Query: 161 HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
            NG  +  +      K+    + + N++ +DT    C A N  G +  + +V V+   P+
Sbjct: 345 INGASLKDSDLYHNWKLSEGSLVLNNMQLNDTSVVQCEARNKHGNLLANAFVYVVELPPQ 404

Query: 221 ITEAPKDEYTVDGKT-VVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDV 277
           I     ++Y+V  KT V + C+ FGAP P++ W  +Q++  L   +++    G L IT V
Sbjct: 405 ILTKNDEQYSVVEKTNVSMDCKTFGAPMPKIQWDRDQEDNLLALDQFSFHTNGTLTITGV 464

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
                G Y C A N  G    S  L V+  T I   P +     G  A F+C    DP +
Sbjct: 465 VKEHEGIYWCTASNNQGNVNISAYLDVRNATKIISPPMEQRARKGGKAIFQCTVEFDPKM 524

Query: 338 KLSIV-WLRGSEPI--DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
              I+ W +    I  D +++  F++  DY+L+++   E D G YTC A++ELD +E  A
Sbjct: 525 SSKIIDWKKNGLEINEDPDNDKYFIE--DYTLSISNVQEGDQGMYTCLARSELDSVEQTA 582

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
            L V    E+PS+  L    +     ++W P
Sbjct: 583 ELVVIDLPESPSDLELSNAQET-SITLTWTP 612



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 141/587 (24%), Positives = 225/587 (38%), Gaps = 52/587 (8%)

Query: 36  QYVTRKKE--VALRNKKVELFCIFGGTPLPQTIWSKDGVP-INPSDRISQGNYGKSLIIK 92
           Q +T+  E    +    V + C   G P+P+  W +D    +   D+ S    G +L I 
Sbjct: 404 QILTKNDEQYSVVEKTNVSMDCKTFGAPMPKIQWDRDQEDNLLALDQFSFHTNG-TLTIT 462

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGL 152
            V    +G Y C  SN  G   + S  L V  A      P    A +     F+C     
Sbjct: 463 GVVKEHEGIYWCTASNNQGNV-NISAYLDVRNATKIISPPMEQRARKGGKAIFQCTVEFD 521

Query: 153 PEPE---IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           P+     I W  NG  I++ P N +  +    ++I N+++ D G Y C A + L  V + 
Sbjct: 522 PKMSSKIIDWKKNGLEINEDPDNDKYFIEDYTLSISNVQEGDQGMYTCLARSELDSVEQT 581

Query: 210 VYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-----RVFGAPKPEVNWIHNQKELTGGRY 264
             + V+    ++ E+P D    + +   +T          +P  E      +     G +
Sbjct: 582 AELVVI----DLPESPSDLELSNAQETSITLTWTPGNENNSPIEEFIIEFEEDSFEPGVW 637

Query: 265 TILE--TGDLKITDVAFAD--SGEYTCFARNKLGTAQGSG---------SLTVKEHTHIT 311
             L    GD+  TD+  +   + ++   A N++G + GS          S   K    + 
Sbjct: 638 HELTRVDGDMVTTDLNLSPYVNYQFRVIAVNEVGPSNGSNPSDRYRTPPSAPTKNPEEVK 697

Query: 312 DQ---PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
            +   PE+ ++          N    P  K  + W R  +  D+  E     +    + V
Sbjct: 698 GEGTVPENMKISWKPLKGIDWNG---PDFKYLVKWRRLGKD-DWREE----VAESPPVIV 749

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVS 422
           T++S  +   Y    Q+  D   A     +        P  +P N  L + ++     V+
Sbjct: 750 TETSTFEP--YEIIVQSVNDLGRASEPKPIIGHSGEDFPDISPENVGL-EAMNESAIKVA 806

Query: 423 WNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLA 482
           W PV  Q L GH +G+ V   +        +EL V+ G +T   +    P S     V  
Sbjct: 807 WLPVQKQGLNGHLKGFMVYYISHSSRHRQTKELRVH-GNTTHALITGLKPFSNYSVEVAI 865

Query: 483 FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
            NG   G  SE     T EGVP     L       ++  L W  PE PNG+L GY+I +Q
Sbjct: 866 MNGKGPGDRSESRMIRTDEGVPSPPSFLHLERQSDTSLTLIWGPPETPNGILTGYEIYHQ 925

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
            V  T +G        I+DPT  +  L+ +     YR +L   T  G
Sbjct: 926 IVNKTHMGAKYFS-ETINDPTQQNWTLSNISSKDTYRFYLYATTSVG 971



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 128/326 (39%), Gaps = 33/326 (10%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSD--RISQGNYGKSLIIKHVE---F 96
           K V   N  + L C        +  W KDG    P D   +++     S+II +      
Sbjct: 23  KYVVYPNDDIVLKCEAKRNAKVKYTWKKDGETFAPEDGPSVNRKKDSGSIIISNGNGNAM 82

Query: 97  SD-QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK--ASGL 152
            D QG Y C  +N +G A S+ I +   + P +  E    I   E  ++   C    S +
Sbjct: 83  KDFQGKYRCYATNELGTAISHEIHVITESTPKWQKEMIRPIEVEEGSSLILPCNPPKSAV 142

Query: 153 PEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTG-NYGCNA--TNSLGYVYK 208
           P P + W+++   +     + R  +G N  +   N++K D   +Y C+A    +   V K
Sbjct: 143 P-PRVIWMNSS--LLHITQDKRVSMGVNGNLYFSNVQKQDEHPDYICHAQFVGARTIVQK 199

Query: 209 DVYV-------NVLAHAPEITEAPKDEYTV---DGKTVVLTCRVFGAPKPEVNWIHNQKE 258
           +          +V    PE+        TV     + + L C   G P PE+ WI     
Sbjct: 200 EAISIKVRPTNSVKFRRPEMMLPEGSMSTVLALRDQPLQLECIAEGLPTPEIEWIPLTGS 259

Query: 259 LTGGRYTILETGDLK----ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
            T G    ++  D K    I  V   D G+Y C A+N  GTA  + ++ V+   +  ++P
Sbjct: 260 TTNGH---IQYDDFKKTLHIDKVQDDDDGDYQCTAKNTQGTATHTFTVVVESAPYWINKP 316

Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLS 340
            D     G+     C     P  K++
Sbjct: 317 MDGIYAPGEDIILHCEVGGKPKPKVT 342


>gi|326679017|ref|XP_001340839.4| PREDICTED: contactin-3-like [Danio rerio]
          Length = 991

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 163/596 (27%), Positives = 250/596 (41%), Gaps = 31/596 (5%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V L C   G P+P+  W + + VP  PS ++   N    L I   +  D G Y 
Sbjct: 207 AAKGSVVTLECFALGNPVPEITWRRANAVPF-PS-KVKMKNSNVVLEIPSFQQEDAGGYE 264

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G+  +    LS  A P +      I  + EE + +ECKA+G P+P   W+ NG
Sbjct: 265 CVAENKMGK-NTVQGRLSFHAKPQWVQTMRDIALSIEERLFWECKANGKPKPSYSWLKNG 323

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++      R ++    +TI ++  SD G Y C A N  G +Y    + VLA  P+ + 
Sbjct: 324 ELLAA---EDRIQIENGALTISSVNLSDAGMYQCVAENKHGIIYFGAELVVLASPPDFSR 380

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILETGDLKITDVAFA 280
           +P         G TV + C+    P     W   N+      R T L  G L++T+V   
Sbjct: 381 SPLRTLLKAKTGSTVTMECKPQAFPSAITLWRKGNEVMQRTDRITFLPDGTLRLTNVTKM 440

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D G Y C ARN+ GTA  SG L V + T IT  P D E+  G+S    C    DP+L +S
Sbjct: 441 DGGNYACLARNQFGTASTSGRLLVTDPTQITQGPMDMEIIVGESIVLPCQISCDPALDVS 500

Query: 341 IVW-LRGSEPIDFESEPRFVQSNDYSLTVTKSSELD-SGQYTCRAQTELDFIEAQATLTV 398
             W   G      +     V  +     + ++ +L  +G+Y C   T+++ + A A L V
Sbjct: 501 FSWAFNGQLLSKLDQHYEHVGGSTSGDLMIRNIQLKHAGKYVCVVDTDVESLSAAAILIV 560

Query: 399 QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE-KDGEGSIREL-- 455
           + P  AP   T+ ++ D+  A +SW P   Q        Y +Q  T    G  ++  +  
Sbjct: 561 KGPPGAPDGVTVEEITDS-TAQLSWRP--GQDNGSPITSYIIQAKTAFTVGWQAVNTVPE 617

Query: 456 IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIP 514
           +++    T T VD        F RVLA N    G PS   +   T + VP T  +     
Sbjct: 618 VIDGNTLTATVVDLNAWVEFEF-RVLARNSVGVGEPSPASLKTRTEDAVPDTAPTDVGGG 676

Query: 515 LGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAG 571
            GS S   + W  V  +  NG   GY I ++ +        +  +P  S     +  +  
Sbjct: 677 GGSKSELVITWEPVPEDLQNGDGFGYIIAFRPLGEVNWTHAVTSVPTQSRYVYRNESILP 736

Query: 572 LEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKN-----PDNVEGRGSTPNNLVISW 622
             P   + + +  Y   G G  S        +N     PD V  R  +   + +SW
Sbjct: 737 FSP---FSVKVGAYNTKGQGPFSPVTIVFSAENEPSGVPDGVWARSISATEIEVSW 789



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 161/640 (25%), Positives = 244/640 (38%), Gaps = 92/640 (14%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV----------EP----- 132
           +L I  VE SD G+YTC V N + + K       VL++P   V          EP     
Sbjct: 148 NLYIAKVEPSDVGNYTCVVVNRITKGK-------VLSSPTPLVLRTDGVMGEYEPKIEVH 200

Query: 133 --EFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
             + + AA+   VT EC A G P PEI W   N  P    P   + K     + I + ++
Sbjct: 201 FSDMVPAAKGSVVTLECFALGNPVPEITWRRANAVPF---PSKVKMKNSNVVLEIPSFQQ 257

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHA-PEITEAPKDEYTVDGKTVVLTCRVFGAPKP 248
            D G Y C A N +G     V   +  HA P+  +  +D      + +   C+  G PKP
Sbjct: 258 EDAGGYECVAENKMGK--NTVQGRLSFHAKPQWVQTMRDIALSIEERLFWECKANGKPKP 315

Query: 249 EVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT 308
             +W+ N + L       +E G L I+ V  +D+G Y C A NK G       L V    
Sbjct: 316 SYSWLKNGELLAAEDRIQIENGALTISSVNLSDAGMYQCVAENKHGIIYFGAELVVLA-- 373

Query: 309 HITDQPEDY---------EVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFV 359
                P D+         + + G + T  C   + PS     +W +G+E +       F+
Sbjct: 374 ----SPPDFSRSPLRTLLKAKTGSTVTMECKPQAFPSAI--TLWRKGNEVMQRTDRITFL 427

Query: 360 QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKA 419
              D +L +T  +++D G Y C A+ +         L V  P +       +++I  +  
Sbjct: 428 P--DGTLRLTNVTKMDGGNYACLARNQFGTASTSGRLLVTDPTQITQGPMDMEIIVGESI 485

Query: 420 V----VSWNPVSPQSLRGHFRGYKVQTWTEK--------DGEGSIRELIVNKGESTTTEV 467
           V    +S +P    S    F G  +    +          G+  IR + +         V
Sbjct: 486 VLPCQISCDPALDVSFSWAFNGQLLSKLDQHYEHVGGSTSGDLMIRNIQLKHAGKYVCVV 545

Query: 468 DKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKP 527
           D  V +    A ++       GPP        P+GV  TV+ +       S   L W +P
Sbjct: 546 DTDVESLSAAAILIV-----KGPPG------APDGV--TVEEIT-----DSTAQLSW-RP 586

Query: 528 EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
            Q NG  +   I       T     +  +P + D  T +A +  L    ++   +     
Sbjct: 587 GQDNGSPITSYIIQAKTAFTVGWQAVNTVPEVIDGNTLTATVVDLNAWVEFEFRVLARNS 646

Query: 588 AGDGAESKYLF------YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            G G  S           VP   P +V G G + + LVI+W  +PE   N   F Y I +
Sbjct: 647 VGVGEPSPASLKTRTEDAVPDTAPTDVGGGGGSKSELVITWEPVPEDLQNGDGFGYIIAF 706

Query: 642 RRHNTGEA-WNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
           R    GE  W         QS  V  N+    F P+ +KV
Sbjct: 707 RP--LGEVNWTHAVTSVPTQSRYVYRNESILPFSPFSVKV 744



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 155/665 (23%), Positives = 261/665 (39%), Gaps = 81/665 (12%)

Query: 31  HAPKQQYVTRKKEVALRNKKVELF--CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKS 88
           HA K Q+V   +++AL  ++  LF  C   G P P   W K+G  +   DRI   N   +
Sbjct: 283 HA-KPQWVQTMRDIALSIEE-RLFWECKANGKPKPSYSWLKNGELLAAEDRIQIEN--GA 338

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA-PYFTVEP--EFINAAEEETVTF 145
           L I  V  SD G Y C   N  G    +  +L VLA+ P F+  P    + A    TVT 
Sbjct: 339 LTISSVNLSDAGMYQCVAENKHG-IIYFGAELVVLASPPDFSRSPLRTLLKAKTGSTVTM 397

Query: 146 ECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGY 205
           ECK    P     W    + + +         G  R+T  N+ K D GNY C A N  G 
Sbjct: 398 ECKPQAFPSAITLWRKGNEVMQRTDRITFLPDGTLRLT--NVTKMDGGNYACLARNQFGT 455

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV--NWIHNQKELT--- 260
                 + ++    +IT+ P D   + G+++VL C++   P  +V  +W  N + L+   
Sbjct: 456 ASTSGRL-LVTDPTQITQGPMDMEIIVGESIVLPCQISCDPALDVSFSWAFNGQLLSKLD 514

Query: 261 ------GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK--------- 305
                 GG      +GDL I ++    +G+Y C     + +   +  L VK         
Sbjct: 515 QHYEHVGGS----TSGDLMIRNIQLKHAGKYVCVVDTDVESLSAAAILIVKGPPGAPDGV 570

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
               ITD         GQ      + ++   ++    +  G + ++  + P  +  N  +
Sbjct: 571 TVEEITDSTAQLSWRPGQD---NGSPITSYIIQAKTAFTVGWQAVN--TVPEVIDGNTLT 625

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIE-AQATLTVQ----VPLEAPSNFTLIQVIDAKKA- 419
            TV   +     ++   A+  +   E + A+L  +    VP  AP++   +      K+ 
Sbjct: 626 ATVVDLNAWVEFEFRVLARNSVGVGEPSPASLKTRTEDAVPDTAPTD---VGGGGGSKSE 682

Query: 420 -VVSWNPVSPQSLRGHFRGYKVQ-------TWTEKDGEGSIRELIVNKGESTTTEVDKFV 471
            V++W PV      G   GY +         WT        +   V + ES        +
Sbjct: 683 LVITWEPVPEDLQNGDGFGYIIAFRPLGEVNWTHAVTSVPTQSRYVYRNES-------IL 735

Query: 472 PASKNFARVLAFNGAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWVKPEQP 530
           P S    +V A+N    GP S +    + E  P G    + A  + ++   + W      
Sbjct: 736 PFSPFSVKVGAYNTKGQGPFSPVTIVFSAENEPSGVPDGVWARSISATEIEVSWHILSVS 795

Query: 531 NGVLMGYKIKY--QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
              ++GY++ Y     K   +G +  R+    D       ++GL   T+Y + ++ +  A
Sbjct: 796 TERVLGYEVVYWEDDTKPETMGKV--RVSANQD----KVNISGLRGYTQYFLTVSAFNTA 849

Query: 589 GDGAESKYLFYV-----PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
           G G  S  +        P + P NVE      + L + W  +  +E  +    Y++ +RR
Sbjct: 850 GTGPLSPTINVTTKKSPPGQPPLNVEWN-LIGSKLTVHWEPVISLEMESDVTGYQVSYRR 908

Query: 644 HNTGE 648
           +   E
Sbjct: 909 NRHKE 913



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 141/376 (37%), Gaps = 24/376 (6%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           ++  L C   G P PQ  WS +G  IN S    +   G +L+I+ ++ + D G Y C   
Sbjct: 13  EEATLACDAKGIPAPQYRWSLNGTLINLSTDSRRRLSGGNLVIRSLDRAQDGGIYQCTAF 72

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA-SGLPEPEIHWVHNGKPI 166
           N  G   S    L        T     ++  E + V   C   S   +    WV N  P 
Sbjct: 73  NPHGAILSRRASLQFAYLNLKTQTRSAVSVREGQGVVLLCGTPSYAGDLSFAWVFNEYPY 132

Query: 167 SQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDVYVNVLAHAPEIT 222
                N RR V      + I  +  SD GNY C   N +  G V       VL     + 
Sbjct: 133 FVQQDN-RRFVSQETGNLYIAKVEPSDVGNYTCVVVNRITKGKVLSSPTPLVLRTDGVMG 191

Query: 223 E-APKDEY-------TVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETG-DLK 273
           E  PK E           G  V L C   G P PE+ W          +  +  +   L+
Sbjct: 192 EYEPKIEVHFSDMVPAAKGSVVTLECFALGNPVPEITWRRANAVPFPSKVKMKNSNVVLE 251

Query: 274 ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVS 333
           I      D+G Y C A NK+G     G L+            D  +   +   + C A  
Sbjct: 252 IPSFQQEDAGGYECVAENKMGKNTVQGRLSFHAKPQWVQTMRDIALSIEERLFWECKANG 311

Query: 334 DPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393
            P  K S  WL+  E +  E     +Q  + +LT++  +  D+G Y C A+ +   I   
Sbjct: 312 KP--KPSYSWLKNGELLAAEDR---IQIENGALTISSVNLSDAGMYQCVAENKHGIIYFG 366

Query: 394 ATLTVQVPLEAPSNFT 409
           A L V   L +P +F+
Sbjct: 367 AELVV---LASPPDFS 379



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 107/280 (38%), Gaps = 32/280 (11%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA 199
           EE  T  C A G+P P+  W  NG  I+ +  + RR  G N +     R  D G Y C A
Sbjct: 12  EEEATLACDAKGIPAPQYRWSLNGTLINLSTDSRRRLSGGNLVIRSLDRAQDGGIYQCTA 71

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPK----PEVNWIHN 255
            N  G +         A+    T+        +G+ VVL C   G P         W+ N
Sbjct: 72  FNPHGAILSRRASLQFAYLNLKTQTRSAVSVREGQGVVLLC---GTPSYAGDLSFAWVFN 128

Query: 256 QK----ELTGGRYTILETGDLKITDVAFADSGEYTCFARNK--------------LGTAQ 297
           +     +    R+   ETG+L I  V  +D G YTC   N+              L T  
Sbjct: 129 EYPYFVQQDNRRFVSQETGNLYIAKVEPSDVGNYTCVVVNRITKGKVLSSPTPLVLRTDG 188

Query: 298 GSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             G    K   H +D         G   T  C A+ +P  +  I W R +  + F S+ +
Sbjct: 189 VMGEYEPKIEVHFSDM---VPAAKGSVVTLECFALGNPVPE--ITWRRANA-VPFPSKVK 242

Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
              SN   L +    + D+G Y C A+ ++     Q  L+
Sbjct: 243 MKNSN-VVLEIPSFQQEDAGGYECVAENKMGKNTVQGRLS 281


>gi|410918977|ref|XP_003972961.1| PREDICTED: contactin-1a-like [Takifugu rubripes]
          Length = 1040

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 185/407 (45%), Gaps = 32/407 (7%)

Query: 30  RHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKS 88
           R  P    V  +   A+    + L C   G P+P  +W K D   + P+  IS+   G  
Sbjct: 238 RKYPADIRVKFQDTTAMLASNITLECFALGNPIPHIVWRKVDATDLPPNHEISES--GAM 295

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEE---TVTF 145
           L + +V++ D G Y CE  N  G+   +   + V +AP +    E IN  + +     + 
Sbjct: 296 LHLYNVQYDDVGGYECEAINTKGK-DWHKAWVYVESAPEWA---ETINNTQIDIGSAHSM 351

Query: 146 ECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGY 205
            C A G P P I W  +G              G   +   +L  +D+G Y C A NS G 
Sbjct: 352 RCVAMGKPFPFIRWYKDGY-----------MYGKGELKFSSLTFTDSGMYQCIAENSWGI 400

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTV---DGKTVVLTCRVFGAPKPEVNWIHNQKEL-TG 261
            Y +  + V+A AP     P  +  +   DG+ VV+ C+   AP+P+  W+  ++ L   
Sbjct: 401 KYANAELRVIACAPTFEFNPVKKQLLGARDGR-VVIECKPRAAPRPQFRWMKGKELLFNN 459

Query: 262 GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA 321
            R +IL  G L+I D    D G YTCFA N  G A  SG LT+ E T IT  PED +V+ 
Sbjct: 460 SRISILFDGSLEIRDATKNDEGVYTCFAENSRGKANSSGYLTITEATSITVAPEDSQVKV 519

Query: 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQ---SNDYS--LTVTKSSELDS 376
           G+    RC A  DP L ++ +W      IDF+SE +  +    +D S  L +  +     
Sbjct: 520 GEEVVLRCAASFDPMLDITFIWAIDFRVIDFDSEWQHYERLWRDDGSGDLRIKNAQIWHE 579

Query: 377 GQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSW 423
           G+YTC AQT +D   A A L V V +  P     ++ I      + W
Sbjct: 580 GRYTCTAQTVVDSDVAYADLKV-VGMPGPPGVIRVEEIGNTGVKLRW 625



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 142/614 (23%), Positives = 228/614 (37%), Gaps = 99/614 (16%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-----PEFINAAEEET 142
           +L I  VE  D G+Y+C VS+ +     +S  +S++  P    E     P  I    ++T
Sbjct: 194 NLYISKVEAQDAGNYSCFVSSPMIGRSVFSKFISLI--PLVPEEGERKYPADIRVKFQDT 251

Query: 143 -------VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNY 195
                  +T EC A G P P I W       +  PPN         + + N++  D G Y
Sbjct: 252 TAMLASNITLECFALGNPIPHIVW--RKVDATDLPPNHEISESGAMLHLYNVQYDDVGGY 309

Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            C A N+ G  +   +V V + APE  E   +     G    + C   G P P + W  +
Sbjct: 310 ECEAINTKGKDWHKAWVYVES-APEWAETINNTQIDIGSAHSMRCVAMGKPFPFIRWYKD 368

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD-QP 314
                G  Y     G+LK + + F DSG Y C A N  G    +  L V       +  P
Sbjct: 369 -----GYMYG---KGELKFSSLTFTDSGMYQCIAENSWGIKYANAELRVIACAPTFEFNP 420

Query: 315 EDYEVEAGQSA--TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
              ++   +       C   + P  +    W++G E +   S  R     D SL +  ++
Sbjct: 421 VKKQLLGARDGRVVIECKPRAAPRPQFR--WMKGKELLFNNS--RISILFDGSLEIRDAT 476

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTV-------------------QVPLEAPSNF----- 408
           + D G YTC A+       +   LT+                   +V L   ++F     
Sbjct: 477 KNDEGVYTCFAENSRGKANSSGYLTITEATSITVAPEDSQVKVGEEVVLRCAASFDPMLD 536

Query: 409 -TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR---ELIVNKGESTT 464
            T I  ID +  V+ ++     S   H+     + W + DG G +R     I ++G  T 
Sbjct: 537 ITFIWAIDFR--VIDFD-----SEWQHYE----RLWRD-DGSGDLRIKNAQIWHEGRYTC 584

Query: 465 TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW 524
           T              V+  + AY       +  V   G PG ++  E   +G++   L+W
Sbjct: 585 TA-----------QTVVDSDVAYAD-----LKVVGMPGPPGVIRVEE---IGNTGVKLRW 625

Query: 525 VKPEQPNGVLMGYKIKYQSVKGTKVGPL--LERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
            K    N  ++ Y I+ +                P   D     A++  + P  +Y+  +
Sbjct: 626 TKGADHNSPILYYTIQTRHYWALNEDDWRNASTSPAFLDGNVERAEVTDIYPWLEYQFRI 685

Query: 583 AGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
               + G G  S      K     P  +P NV G G     +VI+WT +         F 
Sbjct: 686 IATNEHGSGEASIPSLKIKTWDAAPVVSPTNVAGYGGRNGEIVITWTPVEPWHFYGKSFG 745

Query: 637 YRIFWRRHNTGEAW 650
           Y + ++ HN  + W
Sbjct: 746 YIVAFKPHNAYDWW 759



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 110/296 (37%), Gaps = 29/296 (9%)

Query: 111 GEAKSYSIDLSVLAAPYFTVEPEFINAAEEE---TVTFECKASGLPEPEIHWVHNGKPIS 167
           GE + Y  D +    P F  EP  +   E+     ++  C+A   P     W      I 
Sbjct: 24  GEPRIYGDDATGYG-PIFEEEPVDVVYTEDSPDGRISMNCRARANPPASYRWRRGNWEIK 82

Query: 168 --QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
             + P      VG N + I N +K   G Y C A N  G V          +  E  +  
Sbjct: 83  LMEQPDEHYSLVGGN-LVINNPKKKHAGVYICVARNIYGTVISKEAQFKFGYLEEFPQEE 141

Query: 226 KDEYTV-DGKTVVLTCRVFGAPKPEV--NWIHNQKEL----TGGRYTILETGDLKITDVA 278
           +D   V +G+  VL C    A   EV   WI N+  +       R+   +TG+L I+ V 
Sbjct: 142 RDPVHVKEGQGAVLLCAPPNAWPEEVTYRWIFNEFPVFLNTDRRRFVSQKTGNLYISKVE 201

Query: 279 FADSGEYTCFARNKL-GTAQGSGSLTV----------KEHTHITDQPEDYEVEAGQSATF 327
             D+G Y+CF  + + G +  S  +++          K    I  + +D       + T 
Sbjct: 202 AQDAGNYSCFVSSPMIGRSVFSKFISLIPLVPEEGERKYPADIRVKFQDTTAMLASNITL 261

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            C A+ +P     IVW R  +  D        +S    L +      D G Y C A
Sbjct: 262 ECFALGNPIPH--IVW-RKVDATDLPPNHEISESGA-MLHLYNVQYDDVGGYECEA 313



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 3/107 (2%)

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPV--SPQSLRGHFRGYKVQTWTEKDGEGSIRELIV 457
           VP E P++    + + + +A+V W PV  +  SL+ +  GY+V+ W + D        I 
Sbjct: 817 VPTEPPTD-VYARPVSSTEALVWWLPVVDTGTSLQQYIEGYQVKYWRKYDDPEPGANRIF 875

Query: 458 NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVP 504
                  T ++  +P +     V AFNGA  GPP E     T    P
Sbjct: 876 VPATVNQTRLENMLPDAHYLIEVRAFNGAGLGPPGEHCEMFTKRAPP 922


>gi|351700526|gb|EHB03445.1| Contactin-2, partial [Heterocephalus glaber]
          Length = 1024

 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 163/620 (26%), Positives = 259/620 (41%), Gaps = 39/620 (6%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 235 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWATAE----PTLQIPSVSFEDEGTYEC 290

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           E  N  G   +    + V A P +        A     + + C A+G P P + W+ NG+
Sbjct: 291 EAENSRGR-DTVQGRIIVQAQPEWLKVISDTEADIGANLRWGCAAAGKPRPTVRWLRNGE 349

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           P++      R +V    +    L   D+G Y C A N  G +Y    + V A AP+  + 
Sbjct: 350 PLAS---QNRVEVSAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRQN 406

Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           P         G  + + C+   APK  V W    + L    R T+   G L I +++ +D
Sbjct: 407 PVRRLIPAARGGEISIACQPRAAPKATVLWSKGTEILVNSSRLTVTPDGTLVIRNISRSD 466

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP++ L+ 
Sbjct: 467 EGRYTCFAENFMGKANSTGVLSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTF 526

Query: 342 VWLRGSEPIDFES-----EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W     PIDF+          V+     LT+  +     G Y C AQT +D    +AT+
Sbjct: 527 TWTLDDFPIDFDKPGGHYRRASVKETVGDLTILSAQLRHGGTYECMAQTVVDSASKEATV 586

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GSIR 453
            V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G+   +R
Sbjct: 587 LVRGPPGPPGGVVVRDIGDT-TVQLSWS----RGFDNHSPIAKYTLQARTRPAGKWKQVR 641

Query: 454 ELIVN-KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLE 511
               N +G + T +V    P      RVLA N    G PS   S + T E VP    S  
Sbjct: 642 TNPANIEGNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSRIRTKEAVPSVAPSGL 701

Query: 512 AIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
               G+     + W  +  E  NG   GY + ++    +       R+P  +D       
Sbjct: 702 GGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSSSWQ--TARVPG-ADTQYFVYS 758

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNLVISWT 623
              + P T + + +  Y + GDG ES           P   P  V  +G + + + ++W 
Sbjct: 759 NESIRPYTPFEVKIRSYNRRGDGPESLTATVYSAEEEPRVAPTKVWAKGISSSEMNVTWE 818

Query: 624 AMPEIEHNAPHFKYRI-FWR 642
            + + + N     Y I +W+
Sbjct: 819 PVQQ-DMNGVLLGYEIRYWK 837



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 148/368 (40%), Gaps = 24/368 (6%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH-VEFSDQGSYTCEVS 107
           ++V L C    +P     W  +G  +N          G +L+I +  +  D G Y C  S
Sbjct: 39  EQVTLVCRARASPPATYRWKMNGTEMNLGLGSRHQLVGGNLVIMNPTKAQDAGVYQCLAS 98

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
           N VG   S    L       F+ E  + + A E   V   C   +  P     W+ N  P
Sbjct: 99  NPVGTVVSREGVLRFGFLQEFSKEERDPVKAHEGWGVMLPCNPPAHYPGLSYRWLLNEFP 158

Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY-----VNVLAHA 218
            +  P + R  V      + I     SD GNY C AT+ + +  K V+     +N+ A  
Sbjct: 159 -NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAED 217

Query: 219 PEI------TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDL 272
           P +         P + Y + G+ V L C  FG P P + W      L+    T   T  L
Sbjct: 218 PRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWATAEPT--L 275

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV 332
           +I  V+F D G Y C A N  G     G + V+          D E + G +  + C A 
Sbjct: 276 QIPSVSFEDEGTYECEAENSRGRDTVQGRIIVQAQPEWLKVISDTEADIGANLRWGCAAA 335

Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
             P  + ++ WLR  EP+  ++    V+ +   L  +K S  DSG Y C A+ +   I A
Sbjct: 336 GKP--RPTVRWLRNGEPLASQNR---VEVSAGDLRFSKLSLEDSGMYQCVAENKHGTIYA 390

Query: 393 QATLTVQV 400
            A L VQ 
Sbjct: 391 SAELAVQA 398



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 149/654 (22%), Positives = 240/654 (36%), Gaps = 75/654 (11%)

Query: 88  SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
           +L I     SD G+Y+C      + S     +K   ++L+     L AP      P    
Sbjct: 175 NLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPAETY 234

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + VT EC A G P P I W      +S     P+       + I ++   D G Y 
Sbjct: 235 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-----PQWATAEPTLQIPSVSFEDEGTYE 289

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V A  PE  +   D     G  +   C   G P+P V W+ N 
Sbjct: 290 CEAENSRGRDTVQGRIIVQAQ-PEWLKVISDTEADIGANLRWGCAAAGKPRPTVRWLRNG 348

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
           + L       +  GDL+ + ++  DSG Y C A NK GT   S  L V+         P 
Sbjct: 349 EPLASQNRVEVSAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRQNPV 408

Query: 316 DYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
              + A  G   +  C   + P  K +++W +G+E +   S  R   + D +L +   S 
Sbjct: 409 RRLIPAARGGEISIACQPRAAP--KATVLWSKGTEILVNSS--RLTVTPDGTLVIRNISR 464

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APS--------NFTLIQVIDAKKAVV- 421
            D G+YTC A+  +    +   L+V+   +   APS        N TL Q   +    + 
Sbjct: 465 SDEGRYTCFAENFMGKANSTGVLSVRDATKITLAPSSADINLGDNLTL-QCHASHDPTMD 523

Query: 422 ---SWN----PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
              +W     P+      GH+R   V+   E  G+ +I    +  G +        V ++
Sbjct: 524 LTFTWTLDDFPIDFDKPGGHYRRASVK---ETVGDLTILSAQLRHGGTYECMAQTVVDSA 580

Query: 475 KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
              A VL                            +    +G +   L W +    +  +
Sbjct: 581 SKEATVLVRGPPG------------------PPGGVVVRDIGDTTVQLSWSRGFDNHSPI 622

Query: 535 MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
             Y ++ ++    K   +    P   +    +A++ GL P   Y   +      G G  S
Sbjct: 623 AKYTLQARTRPAGKWKQVRTN-PANIEGNAETAQVLGLTPWMDYEFRVLASNILGTGEPS 681

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +    VP   P  + G G  P  L+++WT M     N   F Y + +RR  +  
Sbjct: 682 GPSSRIRTKEAVPSVAPSGLGGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGS-S 740

Query: 649 AWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
           +W    V        V +N+    + P+E+K+       DG  S+   + +  E
Sbjct: 741 SWQTARVPGADTQYFVYSNESIRPYTPFEVKIRSYNRRGDGPESLTATVYSAEE 794



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 147/614 (23%), Positives = 231/614 (37%), Gaps = 84/614 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRI--SQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
           C   G P P   W ++G P+   +R+  S G+    L    +   D G Y C   N  G 
Sbjct: 332 CAAAGKPRPTVRWLRNGEPLASQNRVEVSAGD----LRFSKLSLEDSGMYQCVAENKHGT 387

Query: 113 AKSYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
             + S +L+V A AP F   P    I AA    ++  C+    P+  + W    + +  +
Sbjct: 388 IYA-SAELAVQALAPDFRQNPVRRLIPAARGGEISIACQPRAAPKATVLWSKGTEILVNS 446

Query: 170 PPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
               R  V P+  + I N+ +SD G Y C A N +G       ++V   A +IT AP   
Sbjct: 447 S---RLTVTPDGTLVIRNISRSDEGRYTCFAENFMGKANSTGVLSV-RDATKITLAPSSA 502

Query: 229 YTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVA 278
               G  + L C     P  ++ +     +        GG Y   ++ ET GDL I    
Sbjct: 503 DINLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRASVKETVGDLTILSAQ 562

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE-----DYEVEAGQS--------- 324
               G Y C A+  + +A    ++ V+               D  V+   S         
Sbjct: 563 LRHGGTYECMAQTVVDSASKEATVLVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPI 622

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQ 378
           A +   A + P+ K   V    + P + E      Q        DY   V  S+ L +G+
Sbjct: 623 AKYTLQARTRPAGKWKQV---RTNPANIEGNAETAQVLGLTPWMDYEFRVLASNILGTGE 679

Query: 379 YTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGY 438
            +    + +   EA       VP  APS           + +V+W P+S +   G   GY
Sbjct: 680 PSG-PSSRIRTKEA-------VPSVAPSG-LGGGGGAPGELIVNWTPMSREYQNGDGFGY 730

Query: 439 KVQ-------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            +        +W      G+  +  V   ES    +  + P      ++ ++N   +GP 
Sbjct: 731 LLSFRRQGSSSWQTARVPGADTQYFVYSNES----IRPYTPFE---VKIRSYNRRGDGPE 783

Query: 492 SEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKGTKV 549
           S   +  + E  P    + + A  + SS   + W   +Q  NGVL+GY+I+Y      + 
Sbjct: 784 SLTATVYSAEEEPRVAPTKVWAKGISSSEMNVTWEPVQQDMNGVLLGYEIRYWKAGDKEA 843

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVE 609
                R   +     T A + GL P+TKY + +  Y +AG G  S        K P    
Sbjct: 844 AADRVRTAGLE----TLACVTGLHPNTKYHVTVRAYNRAGTGPASPSTNATTMKPPPQ-- 897

Query: 610 GRGSTPNNLVISWT 623
                P N  ISWT
Sbjct: 898 ---RPPGN--ISWT 906



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 114/297 (38%), Gaps = 30/297 (10%)

Query: 126 PYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
           P F  +P    F   + EE VT  C+A   P     W  NG  ++    +  + VG N +
Sbjct: 21  PVFEDQPLGLLFPEESTEEQVTLVCRARASPPATYRWKMNGTEMNLGLGSRHQLVGGNLV 80

Query: 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR 241
            +   +  D G Y C A+N +G V     V       E ++  +D     +G  V+L C 
Sbjct: 81  IMNPTKAQDAGVYQCLASNPVGTVVSREGVLRFGFLQEFSKEERDPVKAHEGWGVMLPCN 140

Query: 242 VFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGTA 296
                P     W+ N+      T GR+ + + TG+L I     +D G Y+C A + +  +
Sbjct: 141 PPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFS 200

Query: 297 QGSGSLTVKEHTHITDQP-------------EDYEVEAGQSATFRCNAVSDPSLKLSIVW 343
             S      +     + P             E Y +  GQ  T  C A  +P  +  I W
Sbjct: 201 TKSVFSKFAQLNLAAEDPRLFAPSIKARFPAETYAL-VGQQVTLECFAFGNPVPR--IKW 257

Query: 344 LRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
            +    +D    P++  + + +L +   S  D G Y C A+        Q  + VQ 
Sbjct: 258 RK----VDGSLSPQWATA-EPTLQIPSVSFEDEGTYECEAENSRGRDTVQGRIIVQA 309


>gi|363738791|ref|XP_425170.3| PREDICTED: contactin-6 [Gallus gallus]
          Length = 1054

 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 187/714 (26%), Positives = 300/714 (42%), Gaps = 74/714 (10%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +    +L C   G P+P   W + DG  +  + +I        L I  V+  D GSY 
Sbjct: 265 AAKGSSAKLECFALGNPVPSISWRRSDGNSL--TKKIKHDKNKGVLEIPDVQQEDGGSYE 322

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G   +    L V A P +  + E    +  +++ +ECKA G P P   W+ NG
Sbjct: 323 CIAENIRGRNIARG-QLFVYALPEWDKKIENAFLSLYDSLFWECKAKGKPTPSYSWLKNG 381

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           +P+       R +V    + I  L  SD+G Y C A N    +Y    + V+A AP+ ++
Sbjct: 382 QPLMS---EERIQVENGTLIIPMLNMSDSGLYQCVAENKYDTIYASAELRVIAAAPDFSK 438

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
            P  + ++   G  V + CR   +P+  ++W    + L    R  +LE G L++ ++  +
Sbjct: 439 NPVKKTSIVQVGGEVTIGCRPSASPRAAIDWRKGPEVLRLNKRALLLEDGSLRLYNITKS 498

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A+ SG+L VKE T IT  P + +V  G+S    C    DPS+ ++
Sbjct: 499 DAGVYTCIATNQFGVARNSGNLIVKERTVITIAPSNMDVTVGESIVLPCQVSHDPSIAVA 558

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYS---LTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W      IDF+   P F +    S   L +       SG+Y C  QT LD       +
Sbjct: 559 FTWSFSGNQIDFKRGMPHFERIGGESVGDLMIRNIQLHHSGKYVCMVQTTLDSQSTAVDI 618

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD-GEGSIREL 455
            V+ P   P +   ++ I +  AV+SW   S +      + Y +QT T    G  ++  +
Sbjct: 619 IVRGPPGPPEDVR-VEHISSTTAVLSWK--SGKDNNSPVQIYSIQTRTPFSVGWQAVSTV 675

Query: 456 --IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLEA 512
             ++N      T VD   P  +   RV+A N    G PS+  + + T   VP    +  +
Sbjct: 676 PEVLNGRTHKATVVD-LSPWVEYEFRVVARNSVGTGEPSKPSALLKTKAAVPTVAPTNVS 734

Query: 513 IPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT-----KVGPLLERLPYISDPTT 564
              GS S   + W  V  E  NG   GY I ++ +  T      V P +E   Y+     
Sbjct: 735 GGGGSRSELVITWEPVPEELQNGEGFGYIIMFRPLGSTTWTKAAVAP-IEASKYV----- 788

Query: 565 TSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTA 624
              +   + P + + + +  Y   G+G  S        ++   +   G++  ++     +
Sbjct: 789 --YRNESITPLSPFEVKVGVYNNEGEGTLSSISIVYAGEDEPQIAPAGTSALSI-----S 841

Query: 625 MPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTE 684
             E+E         + W+      AWN       R +  VL        YE   V  WT+
Sbjct: 842 AAEVE---------VSWQP----VAWN-------RHTGRVLG-------YE---VLYWTD 871

Query: 685 KDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
              E +  ++ VN G  T   +      +  FA V A+N A  GP S  ++  T
Sbjct: 872 DPKESTAGKVRVN-GNVTAKNITGLKANTVYFATVRAYNTAGTGPSSAPVNVTT 924



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 154/659 (23%), Positives = 253/659 (38%), Gaps = 79/659 (11%)

Query: 40  RKKEVALRNKKVELF--CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           +K E A  +    LF  C   G P P   W K+G P+   +RI   N   +LII  +  S
Sbjct: 348 KKIENAFLSLYDSLFWECKAKGKPTPSYSWLKNGQPLMSEERIQVEN--GTLIIPMLNMS 405

Query: 98  DQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP----EFINAAEEETVTFECKASGLP 153
           D G Y C   N      + +    + AAP F+  P      +    E  VT  C+ S  P
Sbjct: 406 DSGLYQCVAENKYDTIYASAELRVIAAAPDFSKNPVKKTSIVQVGGE--VTIGCRPSASP 463

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYV 212
              I W   G  + +   N R  +  +  + + N+ KSD G Y C ATN  G V ++   
Sbjct: 464 RAAIDW-RKGPEVLRL--NKRALLLEDGSLRLYNITKSDAGVYTCIATNQFG-VARNSGN 519

Query: 213 NVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV----NWIHNQKELTGG-----R 263
            ++     IT AP +     G+++VL C+V   P   V    ++  NQ +   G     R
Sbjct: 520 LIVKERTVITIAPSNMDVTVGESIVLPCQVSHDPSIAVAFTWSFSGNQIDFKRGMPHFER 579

Query: 264 YTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE--A 321
                 GDL I ++    SG+Y C  +  L +   +  + V+        PED  VE  +
Sbjct: 580 IGGESVGDLMIRNIQLHHSGKYVCMVQTTLDSQSTAVDIIVRGPP---GPPEDVRVEHIS 636

Query: 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDS 376
             +A     +  D +  + I  ++   P         + P  +    +  TV   S    
Sbjct: 637 STTAVLSWKSGKDNNSPVQIYSIQTRTPFSVGWQAVSTVPEVLNGRTHKATVVDLSPWVE 696

Query: 377 GQYTCRAQTELDFIE-----AQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
            ++   A+  +   E     A       VP  AP+N +        + V++W PV  +  
Sbjct: 697 YEFRVVARNSVGTGEPSKPSALLKTKAAVPTVAPTNVSGGGG-SRSELVITWEPVPEELQ 755

Query: 432 RGHFRGYKVQ-------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN 484
            G   GY +        TWT+           V + ES T       P S    +V  +N
Sbjct: 756 NGEGFGYIIMFRPLGSTTWTKAAVAPIEASKYVYRNESIT-------PLSPFEVKVGVYN 808

Query: 485 GAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPE---QP------NGVLM 535
               G  S I      E  P      +  P G+SA  +   + E   QP       G ++
Sbjct: 809 NEGEGTLSSISIVYAGEDEP------QIAPAGTSALSISAAEVEVSWQPVAWNRHTGRVL 862

Query: 536 GYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK 595
           GY++ Y +    +      R+    +   T+  + GL+ +T Y   +  Y  AG G  S 
Sbjct: 863 GYEVLYWTDDPKESTAGKVRV----NGNVTAKNITGLKANTVYFATVRAYNTAGTGPSSA 918

Query: 596 YLFYV-----PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEA 649
            +        P + P N+  +  T + + ++W  +  +E+ +    Y+I +R++   +A
Sbjct: 919 PVNVTTKKSPPSQPPANIAWK-LTNSKICLNWEHVKTMENESEVLGYKILYRQNRHSKA 976



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 141/373 (37%), Gaps = 34/373 (9%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH-VEFSDQGSYTCEV 106
           N +V L C   G PLP   W ++G  I+ +        G SL I +  +  D G+Y C  
Sbjct: 69  NPEVLLNCTAKGYPLPSYRWKQNGTDIDLTMSYHYRLVGGSLAINNPRKKQDIGTYQCLA 128

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPEPE-----IHWV 160
           +N  G   S    L       F ++    ++  E + V   C     P P        W 
Sbjct: 129 TNSFGTILSRKAKLQFAYLENFEMKTRSTVSVREGQGVVLLCG----PPPHHGGLSFAWT 184

Query: 161 HNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLG-----------YVY 207
            N   +     + RR V      + I  +   D GNY C  TNS              + 
Sbjct: 185 FNNNTL-YVQEDRRRFVSQETGNLYIAKVEPWDVGNYTCVVTNSKAGRSVQGPPTPLTLR 243

Query: 208 KDVYVNVLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ-KELTGGRYT 265
            D  +    + P+I    P+  Y   G +  L C   G P P ++W  +    LT     
Sbjct: 244 SDGVMG--EYEPKIEARFPETTYAAKGSSAKLECFALGNPVPSISWRRSDGNSLTKKIKH 301

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
               G L+I DV   D G Y C A N  G     G L V        + E+  +    S 
Sbjct: 302 DKNKGVLEIPDVQQEDGGSYECIAENIRGRNIARGQLFVYALPEWDKKIENAFLSLYDSL 361

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P+   S  WL+  +P+   SE R +Q  + +L +   +  DSG Y C A+ 
Sbjct: 362 FWECKAKGKPTPSYS--WLKNGQPL--MSEER-IQVENGTLIIPMLNMSDSGLYQCVAEN 416

Query: 386 ELDFIEAQATLTV 398
           + D I A A L V
Sbjct: 417 KYDTIYASAELRV 429



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 132/561 (23%), Positives = 219/561 (39%), Gaps = 89/561 (15%)

Query: 88   SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
            SL + ++  SD G YTC  +N  G A++ S +L V      T+ P  ++    E++   C
Sbjct: 489  SLRLYNITKSDAGVYTCIATNQFGVARN-SGNLIVKERTVITIAPSNMDVTVGESIVLPC 547

Query: 148  KASGLPEPEIH--WVHNGKPIS--QAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATN 201
            + S  P   +   W  +G  I   +  P+  R  G +   + I N++   +G Y C    
Sbjct: 548  QVSHDPSIAVAFTWSFSGNQIDFKRGMPHFERIGGESVGDLMIRNIQLHHSGKYVCMVQT 607

Query: 202  SLGYVYKDVYVNVLAHAPEITEAPKDEYTVD---GKTVVLTCR-------------VFGA 245
            +L    +   V+++   P     P ++  V+     T VL+ +             +   
Sbjct: 608  TLDS--QSTAVDIIVRGPP---GPPEDVRVEHISSTTAVLSWKSGKDNNSPVQIYSIQTR 662

Query: 246  PKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGS---- 299
                V W  +    E+  GR     T    + D++     E+   ARN +GT + S    
Sbjct: 663  TPFSVGWQAVSTVPEVLNGR-----THKATVVDLSPWVEYEFRVVARNSVGTGEPSKPSA 717

Query: 300  -----------------GSLTVKEHTHITDQPEDYEVEAGQS----ATFRCNAVSDPSLK 338
                             G    +    IT +P   E++ G+       FR          
Sbjct: 718  LLKTKAAVPTVAPTNVSGGGGSRSELVITWEPVPEELQNGEGFGYIIMFRPLG------- 770

Query: 339  LSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
             S  W + +  PI+     ++V  N+ S+T     E+  G Y    +  L  I       
Sbjct: 771  -STTWTKAAVAPIEAS---KYVYRNE-SITPLSPFEVKVGVYNNEGEGTLSSISIVYAGE 825

Query: 398  VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIV 457
             + P  AP+  + +  I A +  VSW PV+     G   GY+V  WT+   E +  ++ V
Sbjct: 826  DE-PQIAPAGTSALS-ISAAEVEVSWQPVAWNRHTGRVLGYEVLYWTDDPKESTAGKVRV 883

Query: 458  NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS 517
            N G  T   +      +  FA V A+N A  GP S  ++  T +  P    +  A  L +
Sbjct: 884  N-GNVTAKNITGLKANTVYFATVRAYNTAGTGPSSAPVNVTTKKSPPSQPPANIAWKLTN 942

Query: 518  SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP- 574
            S   L W  VK  +    ++GYKI Y+  + +K         +I +   TSA+L  L P 
Sbjct: 943  SKICLNWEHVKTMENESEVLGYKILYRQNRHSKA--------HILETNNTSAEL--LVPF 992

Query: 575  STKYRIHLAGYTKAGDGAESK 595
               Y I +   +  GDG+ S+
Sbjct: 993  EEDYLIEIRTISDGGDGSSSE 1013



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 103/289 (35%), Gaps = 38/289 (13%)

Query: 123 LAAPYFTVEPEFIN---AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGP 179
           L  P F  EP  I     +    V   C A G P P   W  NG  I        R VG 
Sbjct: 49  LHGPIFIQEPYDITYSMGSVNPEVLLNCTAKGYPLPSYRWKQNGTDIDLTMSYHYRLVG- 107

Query: 180 NRITIENLRK-SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
             + I N RK  D G Y C ATNS G +         A+        +   +V +G+ VV
Sbjct: 108 GSLAINNPRKKQDIGTYQCLATNSFGTILSRKAKLQFAYLENFEMKTRSTVSVREGQGVV 167

Query: 238 LTCRVFGAPKPE-----VNWIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        W  N   L       R+   ETG+L I  V   D G YTC 
Sbjct: 168 LLC----GPPPHHGGLSFAWTFNNNTLYVQEDRRRFVSQETGNLYIAKVEPWDVGNYTCV 223

Query: 289 ARN-KLG----------TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
             N K G          T +  G +   E       PE      G SA   C A+ +P  
Sbjct: 224 VTNSKAGRSVQGPPTPLTLRSDGVMGEYEPKIEARFPETTYAAKGSSAKLECFALGNPV- 282

Query: 338 KLSIVWLRGSEPIDFESEPRFVQ--SNDYSLTVTKSSELDSGQYTCRAQ 384
             SI W R     D  S  + ++   N   L +    + D G Y C A+
Sbjct: 283 -PSISWRRS----DGNSLTKKIKHDKNKGVLEIPDVQQEDGGSYECIAE 326


>gi|351708733|gb|EHB11652.1| Neural cell adhesion molecule L1, partial [Heterocephalus glaber]
          Length = 1214

 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 206/475 (43%), Gaps = 27/475 (5%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W     P+ P+DR+   N+ K+L + +V   D G Y 
Sbjct: 252 VALQGQPLVLECIAEGFPTPTIKWLFPSGPM-PADRVIYQNHNKTLQLLNVGEQDDGEYH 310

Query: 104 CEVSNGVGEAKS-YSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
           C   N +G A+  Y + +    +P +          E  T   +C+A G P+PE+ W  N
Sbjct: 311 CLAENSLGIARHIYYVTVEGTGSPEWRRGCHLYGPGE--TARLDCQAQGRPQPEVTWRIN 368

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           G  + +   +   ++    + + N++ SDT    C A N  G +  + Y+ V+    +I 
Sbjct: 369 GNRMEELDKDQTYQIHRGALILSNVQPSDTMVTQCEARNRHGLLLTNAYIYVVQLPAKIL 428

Query: 223 EAPKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAF 279
            +    Y  V+G T  L C+ FGAP P V W+  +    L   R+     G + I D+  
Sbjct: 429 TSDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGTMAIRDLQA 488

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
            D+G Y C A N         +L VKE T IT  P +   + G   TF C A  DPSL+ 
Sbjct: 489 NDTGRYFCQAANDQNNVTIVANLHVKEATQITQGPRNAIEKKGSRVTFTCQASFDPSLQR 548

Query: 340 SIVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           SI W      +    +S+  F++  D  L +      D G Y+C A TELD +E +A L 
Sbjct: 549 SITWRGDGHDLQELGDSDKYFIE--DGRLVIDSLDYSDQGNYSCVASTELDEVEGRAQLL 606

Query: 398 VQVPLEAPSNFTLIQVIDAK-----KAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSI 452
           V   + +P     ++V +       +  +SW P   +        Y ++    +      
Sbjct: 607 V---VGSPGPVPHVEVSERHLGKHSQVHLSWTPA--EDHNAAIEKYDIEFEDIEMAPEKW 661

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG---PPSEIISFVTPEGVP 504
             L    G  T+T + K  P      RV A N    G   PPSE +  VTPE  P
Sbjct: 662 HSLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPPSETV--VTPEAAP 713



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 147/569 (25%), Positives = 240/569 (42%), Gaps = 61/569 (10%)

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--NLRKSDTGN 194
           A + + +  EC A G P P I W+    P+    P  R     +  T++  N+ + D G 
Sbjct: 253 ALQGQPLVLECIAEGFPTPTIKWLFPSGPM----PADRVIYQNHNKTLQLLNVGEQDDGE 308

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD----GKTVVLTCRVFGAPKPEV 250
           Y C A NSLG      YV V     E T +P+          G+T  L C+  G P+PEV
Sbjct: 309 YHCLAENSLGIARHIYYVTV-----EGTGSPEWRRGCHLYGPGETARLDCQAQGRPQPEV 363

Query: 251 NWIHN---QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEH 307
            W  N    +EL   +   +  G L +++V  +D+    C ARN+ G    +  + V + 
Sbjct: 364 TWRINGNRMEELDKDQTYQIHRGALILSNVQPSDTMVTQCEARNRHGLLLTNAYIYVVQL 423

Query: 308 TH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
               +T   + Y    G +A   C A   P    S+ WL        + E RF    + +
Sbjct: 424 PAKILTSDNQTYMAVEGSTAYLLCKAFGAPVP--SVQWLDEEGTTVLQDE-RFFPYANGT 480

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVV- 421
           + +      D+G+Y C+A  + + +   A L V+   +    P N      I+ K + V 
Sbjct: 481 MAIRDLQANDTGRYFCQAANDQNNVTIVANLHVKEATQITQGPRN-----AIEKKGSRVT 535

Query: 422 -----SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
                S++P   +S+     G+ +Q   + D      +  +  G      +D       N
Sbjct: 536 FTCQASFDPSLQRSITWRGDGHDLQELGDSD------KYFIEDGRLVIDSLD--YSDQGN 587

Query: 477 FARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMG 536
           ++ V +         ++++   +P  VP  V+  E      S  +L W   E  N  +  
Sbjct: 588 YSCVASTELDEVEGRAQLLVVGSPGPVP-HVEVSERHLGKHSQVHLSWTPAEDHNAAIEK 646

Query: 537 YKIKYQSVK-GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK 595
           Y I+++ ++   +    L ++P   + T+T+ KL+   P   Y   +    K G G  S 
Sbjct: 647 YDIEFEDIEMAPEKWHSLGKVP--GNQTSTTLKLS---PYVHYTFRVTAINKYGPGEPSP 701

Query: 596 YLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEA 649
               V      P KNP +V G G+  NN+VI+W  +  ++ NAP  +YR+ WR   T   
Sbjct: 702 PSETVVTPEAAPEKNPADVRGEGNETNNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGP 761

Query: 650 WNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           W +  V D   S LV+ N  TF+PYEI+V
Sbjct: 762 WQEQTVSD---SFLVVTNTSTFEPYEIRV 787



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 84/186 (45%), Gaps = 9/186 (4%)

Query: 411  IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE-----KDGEGSIRELIVNKGESTTT 465
            ++ +++  A+V W PV+   ++GH RGY V  W E            R  +V    +T+ 
Sbjct: 820  VKPLNSTAALVRWKPVALAQVKGHLRGYNVTYWWEGSQRRHSKRHVHRGHVVVAANTTSV 879

Query: 466  EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWV 525
             +    P S     V AFNG  +GP  +  SF TPEGVPG  ++L      S++  L W 
Sbjct: 880  ILGGLRPYSSYHVEVRAFNGRGSGPAGQQ-SFETPEGVPGHPEALHLECQSSTSLLLHWQ 938

Query: 526  KPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
             P   NGVL GY + Y  +     G      P + DP   +  L  L P  +YR  L   
Sbjct: 939  PPLSHNGVLTGYMLSYYPLDTG--GEQQLSFP-LQDPELRTHNLTNLSPDVRYRFQLQAT 995

Query: 586  TKAGDG 591
            T+ G G
Sbjct: 996  TREGPG 1001



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 97/396 (24%), Positives = 155/396 (39%), Gaps = 49/396 (12%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLIIK-HVE 95
           ++ V      + L C   G P  Q  W KDG    PS+     + +  +  S  I  +  
Sbjct: 43  RRLVVFPTDDISLKCEARGKPEVQFRWMKDGTHFRPSEEPGVMVHEAPHSGSFTITGNNS 102

Query: 96  FSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKAS 150
           F+   QG Y C  SN +G A S+ I L    AP +   TV+P      E E+V   C   
Sbjct: 103 FAQRFQGIYRCFASNKLGTAMSHEIQLMAEGAPKWPKETVKPV--EVEEGESVVLPCNPP 160

Query: 151 GLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLGY 205
              EP  I+W+ N K I     + R  +G N  +   N+  SD   +Y CNA    +   
Sbjct: 161 PSAEPLRIYWM-NSK-ILHIKQDERVSMGQNGNLYFANVLTSDNHSDYICNAHFPGTRTI 218

Query: 206 VYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIHN 255
           + K+ + + V A    I   P+  +          + G+ +VL C   G P P + W+  
Sbjct: 219 IQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLFP 278

Query: 256 QKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLG--------TAQGSGSLTVKE 306
              +   R         L++ +V   D GEY C A N LG        T +G+GS   + 
Sbjct: 279 SGPMPADRVIYQNHNKTLQLLNVGEQDDGEYHCLAENSLGIARHIYYVTVEGTGSPEWRR 338

Query: 307 HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             H+           G++A   C A   P  +  + W      ++   + +  Q +  +L
Sbjct: 339 GCHLYG--------PGETARLDCQAQGRP--QPEVTWRINGNRMEELDKDQTYQIHRGAL 388

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATL-TVQVP 401
            ++     D+    C A+     +   A +  VQ+P
Sbjct: 389 ILSNVQPSDTMVTQCEARNRHGLLLTNAYIYVVQLP 424



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 109/290 (37%), Gaps = 19/290 (6%)

Query: 415  DAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
            +    V++W P+           Y+VQ W  +   G  +E  V+      T    F P  
Sbjct: 726  ETNNMVITWKPLRWMDWNAPQVQYRVQ-WRPQGTRGPWQEQTVSDSFLVVTNTSTFEPYE 784

Query: 475  KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAI-PLGSSAFYLKW--VKPEQPN 531
                RV A N    GP  ++    + E  P     LE + PL S+A  ++W  V   Q  
Sbjct: 785  ---IRVQAVNSQGKGPEPQVTIGYSGEDYPQVSPELEKVKPLNSTAALVRWKPVALAQVK 841

Query: 532  GVLMGYKIKY--QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
            G L GY + Y  +  +       + R   +    TTS  L GL P + Y + +  +   G
Sbjct: 842  GHLRGYNVTYWWEGSQRRHSKRHVHRGHVVVAANTTSVILGGLRPYSSYHVEVRAFNGRG 901

Query: 590  DGAESKYLFYVPF---KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
             G   +  F  P     +P+ +     +  +L++ W   P + HN     Y + +   +T
Sbjct: 902  SGPAGQQSFETPEGVPGHPEALHLECQSSTSLLLHW--QPPLSHNGVLTGYMLSYYPLDT 959

Query: 647  GEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
            G    Q      +  EL   N     P   Y  ++  T  E  GE  +RE
Sbjct: 960  GG--EQQLSFPLQDPELRTHNLTNLSPDVRYRFQLQATTREGPGEAIVRE 1007


>gi|149036850|gb|EDL91468.1| contactin 4, isoform CRA_c [Rattus norvegicus]
          Length = 586

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 184/397 (46%), Gaps = 36/397 (9%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+P  +W + DG PI    R  + +    L I + +  D GSY 
Sbjct: 171 AEKGSTVKLECFALGNPVPTILWRRADGKPIARKARRHKSS--GILEIPNFQQEDAGSYE 228

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    ++  A P +      I+ A EE+V +ECKA+G P+P   W+ NG
Sbjct: 229 CVAENSRGKNIAKG-QVTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNG 287

Query: 164 KPISQAPPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
            P+       R ++    G   ITI NL  SD G Y C A N  G +Y    ++V+A +P
Sbjct: 288 DPLLT-----RERIQIEQGTLNITIVNL--SDAGMYQCVAENKHGVIYASAELSVIAESP 340

Query: 220 EITEAPKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITD 276
           + +       T+   G  VV+ C+   +P+P   W   ++ L    R TI E G+L+I +
Sbjct: 341 DFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIIN 400

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
           V  +D+G YTC A N  GTA  +G++ VK+ T +   P   +V  G+S    C    D S
Sbjct: 401 VTKSDAGSYTCIATNHFGTASSTGNVVVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHS 460

Query: 337 LKLSIVWLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
           L +   W      IDF+ +         Q +   L +       +G+Y C  QT +D + 
Sbjct: 461 LDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLS 520

Query: 392 AQATLTVQVPLEAPSNFTLIQVIDAK---KAVVSWNP 425
           A A L V+VP          +++D K     VV  NP
Sbjct: 521 AAADLIVRVP----------ELVDGKTFTATVVGLNP 547



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 136/561 (24%), Positives = 205/561 (36%), Gaps = 95/561 (16%)

Query: 119 DLSVLAAPYFTVEPEFIN---AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           D   L  P F  EP  +     +EE+ V   C+  G P+P I W  NG  +     + R 
Sbjct: 19  DDYTLHGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIG-MDFRY 77

Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLG----------YVYKDVY------------- 211
            V    + I N  K+ D+G Y C ATNS G          + Y + +             
Sbjct: 78  SVVEGSLLINNPNKTQDSGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRG 137

Query: 212 --VNVLAHAPEITEAPKDEY----------TV---DGKTVVLTCRVFGAPKPEVNWIH-N 255
             + +L   P  +     EY          TV    G TV L C   G P P + W   +
Sbjct: 138 QGMVLLCGPPPHSGGVMGEYEPKIEVQFPETVPAEKGSTVKLECFALGNPVPTILWRRAD 197

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE 315
            K +         +G L+I +    D+G Y C A N  G     G +T     +      
Sbjct: 198 GKPIARKARRHKSSGILEIPNFQQEDAGSYECVAENSRGKNIAKGQVTFYAQPNWVQIIN 257

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
           D  V   +S  + C A   P  K +  WL+  +P+        +Q    +L +T  +  D
Sbjct: 258 DIHVAMEESVFWECKANGRP--KPTYRWLKNGDPLLTRER---IQIEQGTLNITIVNLSD 312

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPS-------NFTLIQVIDAKKAVVSWNP-VS 427
           +G Y C A+ +   I A A L+V    E+P          TL++V    + V+   P  S
Sbjct: 313 AGMYQCVAENKHGVIYASAELSVIA--ESPDFSRTLLKRVTLVKV--GGEVVIECKPKAS 368

Query: 428 PQSLRGHFRGYKVQTWTEK---DGEGSIRELIVNK---GESTTTEVDKFVPASKNFARVL 481
           P+ +    +G ++    E+     +G++R + V K   G  T    + F  AS     V+
Sbjct: 369 PRPVYTWRKGREILRENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNVVV 428

Query: 482 AFNGAYNGPPSEII-----SFVTPEGVPGTVQSLE----------AIPLGSSAFYLKWVK 526
                   PPS +      S V P  V     SL+           I       + + V 
Sbjct: 429 KDPTKVMVPPSSMDVTVGESIVLPCQVTHD-HSLDIVFTWTFNGHLIDFDKDGDHFERVG 487

Query: 527 PEQPNGVLMGYKI------KYQSVKGTKV------GPLLERLPYISDPTTTSAKLAGLEP 574
            +   G LM   I      KY  +  T V        L+ R+P + D  T +A + GL P
Sbjct: 488 GQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIVRVPELVDGKTFTATVVGLNP 547

Query: 575 STKYRIHLAGYTKAGDGAESK 595
             +Y          G G  S+
Sbjct: 548 WVEYEFRTVAANVIGIGEPSR 568


>gi|332811558|ref|XP_514131.3| PREDICTED: contactin-2 [Pan troglodytes]
          Length = 1005

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 167/628 (26%), Positives = 268/628 (42%), Gaps = 45/628 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWTTAE----PTLQIPSVSFEDEGTYEC 306

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           E  N  G   +    + V A P +        A     + + C A+G P P + W+ NG+
Sbjct: 307 EAENSKGR-DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGE 365

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           P++      R +V    +    L   D+G Y C A N  G +Y    + V A AP+    
Sbjct: 366 PLAS---QNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLN 422

Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           P         G  +V+ C+   APK  V W    + L    R T+   G L I +++ +D
Sbjct: 423 PVRRLIPAARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSD 482

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP++ L+ 
Sbjct: 483 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTF 542

Query: 342 VWLRGSEPIDFESEPRFVQSNDY-----SLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W     PIDF+      +  +       LT+  +     G+YTC AQT +D    +AT+
Sbjct: 543 TWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATV 602

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GSIR 453
            V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G+   +R
Sbjct: 603 LVRGPPGPPGGVVVRDIGDTTIQ-LSWS----RGFDNHSPIAKYTLQARTPPAGKWKQVR 657

Query: 454 ELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGVPGTVQ 508
               N +G + T +V    P      RV+A N    G  +GP S+I    T E  P    
Sbjct: 658 TNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKI---RTREAAPSVAP 714

Query: 509 SLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565
           S  +   G+     + W  +  E  NG   GY + ++    T       R+P  +D    
Sbjct: 715 SGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQ--TARVPG-ADAQYF 771

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGSTPNNLVI 620
                 + P T + + +  Y + GDG ES   L Y     P   P  V  +G + + + +
Sbjct: 772 VYSNESVRPYTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNV 831

Query: 621 SWTAMPEIEHNAPHFKYRI-FWRRHNTG 647
           +W  + + + N     Y I +W+  + G
Sbjct: 832 TWEPVQQ-DMNGILLGYEIRYWKAGDKG 858



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 150/374 (40%), Gaps = 38/374 (10%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           ++V L C    +P     W  +G  + + P  R  Q   G  +I+   +  D G Y C  
Sbjct: 55  EQVLLACRARASPPATYRWKMNGTEMKLEPGSR-HQLVGGNLVIMNPTKAQDAGVYQCLA 113

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIH------- 158
           SN VG   S    L       F    EF     +   T E     LP  P  H       
Sbjct: 114 SNPVGTVVSREAILR------FGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYR 167

Query: 159 WVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY----- 211
           W+ N  P +  P + R  V      + I     SD GNY C AT+ + +  K V+     
Sbjct: 168 WLLNEFP-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQ 226

Query: 212 VNVLAH-----APEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           +N+ A      AP I    P + Y + G+ V L C  FG P P + W      L+  ++T
Sbjct: 227 LNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-PQWT 285

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
             E   L+I  V+F D G Y C A N  G     G + V+          D E + G + 
Sbjct: 286 TAEP-TLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNL 344

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P  + ++ WLR  EP+  ++    +  +   L  +K S  DSG Y C A+ 
Sbjct: 345 RWGCAAAGKP--RPTVRWLRNGEPLASQNRVEVLAGD---LRFSKLSLEDSGMYQCVAEN 399

Query: 386 ELDFIEAQATLTVQ 399
           +   I A A L VQ
Sbjct: 400 KHGTIYASAELAVQ 413



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 114/299 (38%), Gaps = 34/299 (11%)

Query: 125 APYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P F  +P    F   + EE V   C+A   P     W  NG  +   P +  + VG N 
Sbjct: 36  GPVFEDQPLSVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNL 95

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTC 240
           + +   +  D G Y C A+N +G V     +       E ++  +D   T +G  V+L C
Sbjct: 96  VIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKTHEGWGVMLPC 155

Query: 241 RVFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGT 295
                 P     W+ N+      T GR+ + + TG+L I     +D G Y+C A + +  
Sbjct: 156 NPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDF 215

Query: 296 AQGSGSLTVKEHTHITDQPEDYEVEA---------------GQSATFRCNAVSDPSLKLS 340
           +  S      +   +    ED  + A               GQ  T  C A  +P  +  
Sbjct: 216 STKS---VFSKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPR-- 270

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           I W +    +D    P++  + + +L +   S  D G Y C A+        Q  + VQ
Sbjct: 271 IKWRK----VDGSLSPQWTTA-EPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQ 324


>gi|109474014|ref|XP_001077843.1| PREDICTED: cell adhesion molecule with homology to L1CAM [Rattus
           norvegicus]
          Length = 1225

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 179/730 (24%), Positives = 299/730 (40%), Gaps = 75/730 (10%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P  Q  +   +  L+   + L C   G P PQ  WSK G  + P  R +   + K+L I+
Sbjct: 255 PPAQIGSASSKTVLKGDTLLLECFAEGLPTPQIEWSKLGSEL-PKGRATIEIHEKTLKIE 313

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGL 152
           +V + D+G+Y C  +N +G+A S+   + V   P +  +P+    +        C+A G 
Sbjct: 314 NVSYQDRGNYRCTANNLLGKA-SHDFHVIVEEPPRWKKKPQSAVYSTGSNGILLCEAEGE 372

Query: 153 PEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYV 212
           P+P I W  NG PI   P  P   + P  I+  NL+ + T  Y C A+N  G +  +  +
Sbjct: 373 PQPTIKWRVNGLPIENHP-FPGDVMFPREISFTNLQPNHTAVYQCEASNIHGTILANANI 431

Query: 213 NVLAHAPEITEAPKDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILET 269
           +V+   P I    ++ Y TV G +  L C  F +PK  V W        L GGRY   E 
Sbjct: 432 DVVDVVPLIQTKNEENYETVVGYSAFLHCEYFASPKATVVWEVADETHPLEGGRYHTHEN 491

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I      D+G Y+C+  N +G A  + +L ++  T +   P++  +         C
Sbjct: 492 GTLEIERTTEEDAGSYSCWVDNTMGKAVITANLDIRNATKLRVFPKNPRIPKSHVLELYC 551

Query: 330 NAVSDPSLK--LSIVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
            +  D  LK  L + W +  E  +   +E   +  +  +LT++  S  D G Y+C AQT 
Sbjct: 552 ESQCDSHLKHSLKLSWSKDGEAFEMNGTEDGRIVIDGANLTISNISGEDQGIYSCSAQTA 611

Query: 387 LDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
           LD    +  +TV    + P N  L+     +   +SW      + +     Y V+    +
Sbjct: 612 LDSTSEKTQVTVLGVPDPPRNL-LLSERQNRSVRLSWEAGDDHNSK--ISEYIVEFEGNR 668

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN---GAYNGPPSEIISF--VTPE 501
           +  G   EL   +GE T   V    P  +   RV A N    +++  PS+        P+
Sbjct: 669 EEPGKWEELTRVRGEETDV-VLPLAPYVRYQFRVTAVNEVGKSHSSQPSDHHETPPAAPD 727

Query: 502 GVPGTVQSLEAIPLGSSAFYLKW---VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
             P  ++   + P       +KW   +K  + NG  + Y++ ++     +          
Sbjct: 728 KNPHNIRVQASQP---KEMIIKWGCPLKSMEQNGPGLEYRVSWKPQGAPE---------E 775

Query: 559 ISDPTTTSAKLAGLEPS--TKYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN--VEGRGS 613
             + T T+  L  + P+    Y + +    + G G E + +  Y     P    V  R  
Sbjct: 776 WEEETVTNHTLRVMTPTVYAPYDVQVQAINQLGSGPEPQPVTLYSGEDYPSTAPVIHRVD 835

Query: 614 TPNNLV--ISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
             N+ +  ++W+++P+   +     Y+I W        W    +LD R            
Sbjct: 836 VMNSTLVKVTWSSIPKETVHGLLRGYQINW--------WKTKSLLDGRT----------- 876

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
            P E+ +++                  G+  +  V    P S+    VLA+N    GP S
Sbjct: 877 HPKEVNILRF----------------SGQRNSGMVPSLEPFSEFHLTVLAYNSKGAGPES 920

Query: 732 EIISFVTPEG 741
           E   F TPEG
Sbjct: 921 EPYIFQTPEG 930



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 137/583 (23%), Positives = 236/583 (40%), Gaps = 66/583 (11%)

Query: 53   LFCIFGGTPLPQTIW--SKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L C +  +P    +W  + +  P+      +  N   +L I+     D GSY+C V N +
Sbjct: 458  LHCEYFASPKATVVWEVADETHPLEGGRYHTHEN--GTLEIERTTEEDAGSYSCWVDNTM 515

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA---SGLPEP-EIHWVHNGKPI 166
            G+A   + +L +  A    V P+     +   +   C++   S L    ++ W  +G+  
Sbjct: 516  GKA-VITANLDIRNATKLRVFPKNPRIPKSHVLELYCESQCDSHLKHSLKLSWSKDGEAF 574

Query: 167  SQAPPNPRRKV--GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
                    R V  G N +TI N+   D G Y C+A  +L    +   V VL     + + 
Sbjct: 575  EMNGTEDGRIVIDGAN-LTISNISGEDQGIYSCSAQTALDSTSEKTQVTVLG----VPDP 629

Query: 225  PKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQK------ELTG-----GRYTILETGD 271
            P++    +   ++V L+         E    HN K      E  G     G++  L    
Sbjct: 630  PRNLLLSERQNRSVRLSW--------EAGDDHNSKISEYIVEFEGNREEPGKWEELTRVR 681

Query: 272  LKITDVAFADSG----EYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQ-- 323
             + TDV    +     ++   A N++G +  S      E         P +  V+A Q  
Sbjct: 682  GEETDVVLPLAPYVRYQFRVTAVNEVGKSHSSQPSDHHETPPAAPDKNPHNIRVQASQPK 741

Query: 324  ------SATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSG 377
                      +    + P L+  + W     P ++E E       +++L V   +     
Sbjct: 742  EMIIKWGCPLKSMEQNGPGLEYRVSWKPQGAPEEWEEE----TVTNHTLRVMTPTVYAPY 797

Query: 378  QYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV---VSWNPVSPQSLRGH 434
                +A  +L        +T+    + PS   +I  +D   +    V+W+ +  +++ G 
Sbjct: 798  DVQVQAINQLGSGPEPQPVTLYSGEDYPSTAPVIHRVDVMNSTLVKVTWSSIPKETVHGL 857

Query: 435  FRGYKVQTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNG 489
             RGY++  W  K   DG    +E+ + +  G+  +  V    P S+    VLA+N    G
Sbjct: 858  LRGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLEPFSEFHLTVLAYNSKGAG 917

Query: 490  PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-K 548
            P SE   F TPEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T +
Sbjct: 918  PESEPYIFQTPEGVPEQPSFLKVIKVDKDTATLSWGLPKKLNGNLTGYLLQYQIINDTYE 977

Query: 549  VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            +G L E    ++ P+ +S  L+ L  +TKY+ +L   T  G G
Sbjct: 978  LGELNEI--NVTTPSKSSWHLSNLNATTKYKFYLKACTSRGCG 1018



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 107/411 (26%), Positives = 160/411 (38%), Gaps = 51/411 (12%)

Query: 34  KQQYVTRKKEVALR-NKKVELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLI 90
           KQ YV    +VA   ++  ++ C   G P P+  W+KD  P + SD   I+  N G   I
Sbjct: 38  KQSYV----QVAFPFDEYFQIECEAKGNPEPKFSWTKDDKPFDLSDPRIIAFNNSGTFRI 93

Query: 91  IKHVEFSD-QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK 148
                 S  QG Y C  SN +G A S  I+  V   P F  E  E I+  E +++   C 
Sbjct: 94  PNEGHISHFQGKYRCFASNRLGTAISEEIEFIVPGVPKFPKEKIEPIDVEEGDSIVLPCN 153

Query: 149 -ASGLPEPEIHWVH-------------------------------NGKPISQAPPNPRRK 176
              G P   I+W++                               N      A P  R  
Sbjct: 154 PPKGHPPLHIYWMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPKLRTI 213

Query: 177 VG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK 234
           V   P ++T+ +L+ ++  +     +N    + K     +L    +I  A   +  + G 
Sbjct: 214 VQKMPMKLTVNSLKHANDSSSSTEISNQANSI-KQRKPKLLLPPAQIGSA-SSKTVLKGD 271

Query: 235 TVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI-LETGDLKITDVAFADSGEYTCFARNKL 293
           T++L C   G P P++ W     EL  GR TI +    LKI +V++ D G Y C A N L
Sbjct: 272 TLLLECFAEGLPTPQIEWSKLGSELPKGRATIEIHEKTLKIENVSYQDRGNYRCTANNLL 331

Query: 294 GTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFE 353
           G A     + V+E      +P+      G +    C A  +P  + +I W     PI+  
Sbjct: 332 GKASHDFHVIVEEPPRWKKKPQSAVYSTGSNGILLCEAEGEP--QPTIKWRVNGLPIENH 389

Query: 354 SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV--QVPL 402
             P  V      ++ T      +  Y C A      I A A + V   VPL
Sbjct: 390 PFPGDVMF-PREISFTNLQPNHTAVYQCEASNIHGTILANANIDVVDVVPL 439



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 88/214 (41%), Gaps = 13/214 (6%)

Query: 118 IDLSVLAAPYFTVEPEFINAAE--EETVTFECKASGLPEPEIHWVHNGKPISQAPPN--P 173
           I LSV   P   V+  ++  A   +E    EC+A G PEP+  W  + KP   + P    
Sbjct: 26  IPLSVHQVPTI-VKQSYVQVAFPFDEYFQIECEAKGNPEPKFSWTKDDKPFDLSDPRIIA 84

Query: 174 RRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-D 232
               G  RI  E       G Y C A+N LG    +    ++   P+  +   +   V +
Sbjct: 85  FNNSGTFRIPNEGHISHFQGKYRCFASNRLGTAISEEIEFIVPGVPKFPKEKIEPIDVEE 144

Query: 233 GKTVVLTCR-VFGAPKPEVNWIHNQKELT--GGRYTILETGDLKITDVAFADS-GEYTCF 288
           G ++VL C    G P   + W++ + E      R  + + GDL   +V   DS  +Y CF
Sbjct: 145 GDSIVLPCNPPKGHPPLHIYWMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCF 204

Query: 289 AR-NKLGT--AQGSGSLTVKEHTHITDQPEDYEV 319
           A   KL T   +    LTV    H  D     E+
Sbjct: 205 AAFPKLRTIVQKMPMKLTVNSLKHANDSSSSTEI 238


>gi|334335510|ref|XP_001373638.2| PREDICTED: contactin-3 [Monodelphis domestica]
          Length = 1031

 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 166/634 (26%), Positives = 265/634 (41%), Gaps = 36/634 (5%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P +   ++ + N    L I + +  D G Y 
Sbjct: 241 AAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKMRKSN--GMLEIPNFQQEDTGLYE 298

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    + I AA E+ + +EC+ASG P+P   W+ NG
Sbjct: 299 CIAENSRGKNIARG-RLTYYAKPHWVQMIKDIEAAVEDNLYWECRASGKPKPSYRWLKNG 357

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +       R ++    ++I  L  +D+G Y C A N  G +Y    + V+A AP+ ++
Sbjct: 358 DGLIV---EERVQIDNGALSIAVLNVNDSGMYQCIAENKHGLIYSSAELKVVASAPDFSK 414

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
            P  +      G  V+  C+   +PK   +W    + L +  R  IL+ G L+I +V   
Sbjct: 415 NPMKKLIQVQIGSLVIFDCKPKASPKAHCSWKKGDEILQSSERTAILKDGGLQIANVTKL 474

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D G YTC A N+ G A  S  L V E T IT  P + +V  G+S    C    DP L + 
Sbjct: 475 DVGTYTCIAENQFGKASSSTKLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDIV 534

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S+   L +       SG+Y C  QTE+D + + A L
Sbjct: 535 FTWYFNGAITDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTEVDSVSSAADL 594

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGEGSIRE 454
            V+     P +  + ++ D   A +SW     +    H     Y +Q  T       I  
Sbjct: 595 IVRGSPGPPESVKVDEITDT-TAQLSWK----EGTDNHSPITSYVIQARTPFSVGWQIVT 649

Query: 455 LIVN--KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLE 511
            + +   G++ T  V    P  +   RV+A N    G PS     V T E VP    S  
Sbjct: 650 TVPDTIDGKTFTATVVDLNPWVEYEFRVVANNKIGGGEPSLPSEKVRTEEAVPEVPPSEV 709

Query: 512 AIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
           +   GS S   + W  V  E  NG   GY + ++ +  T     +   P        +  
Sbjct: 710 SGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTTWIQTVVTSPDTPRYVFRNES 769

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNNLVISWT 623
           +    P   Y + +  Y   G+G  S    +F     P   P +V     + + + +SW 
Sbjct: 770 ILSFSP---YEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSHVLANSLSSSIIEVSWD 826

Query: 624 AMPEIEHNAPHFKYRI-FWRRHNTGEAWNQDDVL 656
           A+P    +     Y I +W      ++ N+  V+
Sbjct: 827 AIPWKMSSGRLLGYEIRYWNNGGKEDSSNRVKVM 860



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 165/637 (25%), Positives = 242/637 (37%), Gaps = 86/637 (13%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V++ V   +       ++           P   V+ PE + AA
Sbjct: 183 LYIAKVEPSDVGNYTCVVTSTVTNNRVLGSPTPLVLRTDGVMGEYEPKIEVQFPETLPAA 242

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P S      + +     + I N ++ DTG Y C
Sbjct: 243 KGSTVKLECFALGNPVPQINWRRSDGLPFSS---KIKMRKSNGMLEIPNFQQEDTGLYEC 299

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K++    L +   P   +  KD        +   CR  G PKP   W+ N
Sbjct: 300 IAENSRG---KNIARGRLTYYAKPHWVQMIKDIEAAVEDNLYWECRASGKPKPSYRWLKN 356

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
              L       ++ G L I  +   DSG Y C A NK G    S  L  V      +  P
Sbjct: 357 GDGLIVEERVQIDNGALSIAVLNVNDSGMYQCIAENKHGLIYSSAELKVVASAPDFSKNP 416

Query: 315 ED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
                +V+ G    F C   + P    S  W +G E +  +S  R     D  L +   +
Sbjct: 417 MKKLIQVQIGSLVIFDCKPKASPKAHCS--WKKGDEIL--QSSERTAILKDGGLQIANVT 472

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAV-----VSWN 424
           +LD G YTC A+ +     +   L V  P     APSN      +   ++V     V  +
Sbjct: 473 KLDVGTYTCIAENQFGKASSSTKLVVTEPTRITLAPSNMD----VSVGESVILPCQVQHD 528

Query: 425 PVSPQSLRGHFRGY-----KVQTWTEKDGEGSIRELIVNKGE---------STTTEVDKF 470
           P+       +F G      K  +  EK G  S  +L++   +            TEVD  
Sbjct: 529 PLLDIVFTWYFNGAITDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTEVDSV 588

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
             A+    R                      G PG  +S++   +  +   L W +    
Sbjct: 589 SSAADLIVR----------------------GSPGPPESVKVDEITDTTAQLSWKEGTDN 626

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           +  +  Y I  Q+     VG  ++  +P   D  T +A +  L P  +Y   +    K G
Sbjct: 627 HSPITSYVI--QARTPFSVGWQIVTTVPDTIDGKTFTATVVDLNPWVEYEFRVVANNKIG 684

Query: 590 DGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  S      +    VP   P  V G G + + LVI+W  +PE   N   F Y + +R 
Sbjct: 685 GGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRP 744

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQP--TFQPYEIKV 678
                 W Q  V        V  N+   +F PYE+KV
Sbjct: 745 LGV-TTWIQTVVTSPDTPRYVFRNESILSFSPYEVKV 780



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 159/692 (22%), Positives = 273/692 (39%), Gaps = 100/692 (14%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +   +R+   N   S+ + +V  +D G Y C   N  G   
Sbjct: 341 CRASGKPKPSYRWLKNGDGLIVEERVQIDNGALSIAVLNV--NDSGMYQCIAENKHGLIY 398

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           S S +L V+A AP F+  P  + I       V F+CK    P+    W    + +  +  
Sbjct: 399 S-SAELKVVASAPDFSKNPMKKLIQVQIGSLVIFDCKPKASPKAHCSWKKGDEILQSSER 457

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
               K G   + I N+ K D G Y C A N  G       + V+     IT AP +    
Sbjct: 458 TAILKDG--GLQIANVTKLDVGTYTCIAENQFGKASSSTKL-VVTEPTRITLAPSNMDVS 514

Query: 232 DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
            G++V+L C+V   P  ++   W  N             E  GG      +GDL I ++ 
Sbjct: 515 VGESVILPCQVQHDPLLDIVFTWYFNGAITDFKKDGSHFEKVGGS----SSGDLMIRNIQ 570

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
              SG+Y C  + ++ +   +  L V+                G   + + + ++D + +
Sbjct: 571 LKHSGKYVCMVQTEVDSVSSAADLIVRG-------------SPGPPESVKVDEITDTTAQ 617

Query: 339 LSIVWLRGSE---PI-DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA-----QTELDF 389
           LS  W  G++   PI  +  + R   S  + +  T    +D   +T          E +F
Sbjct: 618 LS--WKEGTDNHSPITSYVIQARTPFSVGWQIVTTVPDTIDGKTFTATVVDLNPWVEYEF 675

Query: 390 --------------IEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH- 434
                         + ++   T +   E P +          + V++W+PV  +   G  
Sbjct: 676 RVVANNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEG 735

Query: 435 ------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
                 FR   V TW +           V + ES  +    F P      +V  +N    
Sbjct: 736 FGYVVAFRPLGVTTWIQTVVTSPDTPRYVFRNESILS----FSPYE---VKVGVYNNKGE 788

Query: 489 GPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
           GP S + +  + E  P    S + A  L SS   + W  +  +  +G L+GY+I+Y +  
Sbjct: 789 GPFSPVTTVFSAEEEPTVAPSHVLANSLSSSIIEVSWDAIPWKMSSGRLLGYEIRYWNNG 848

Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV----- 600
           G +      R+  + + TT  A+L GL+ +  Y   +  Y  AG G  S  +        
Sbjct: 849 GKEDSS--NRVKVMGNETT--ARLQGLQSNLVYYTAVRAYNSAGTGPFSATVNATTKKMP 904

Query: 601 PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ 660
           P + P NV    +T + ++I+W  +  +++ +    Y++F+R  +     N  ++L+  +
Sbjct: 905 PSQPPGNVVWN-ATESKVLINWEQVKAMDNESEVTGYKVFYRTSSQ----NNMNILNTNK 959

Query: 661 --SELVLANQPTFQPYEIKVVQTWTEKDGEGS 690
             +EL+L   P  + Y I+V  +    DG  S
Sbjct: 960 TSAELLL---PVNEDYIIEVKASTDGGDGTSS 988



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 148/374 (39%), Gaps = 28/374 (7%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFSDQGSY 102
           V    KK+ L C   G P P   W  +G  I+ S D   +   G  ++I      D G+Y
Sbjct: 41  VGSEEKKITLNCEAKGNPSPHYRWQLNGSDIDLSMDYRYKLIGGNLVVINPSRNRDIGTY 100

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEI 157
            C  +N +G   S    L      +F T     ++  E + V   C   G P    E   
Sbjct: 101 QCFATNSLGTVVSKEAKLQFAYLEHFKTKMRSTVSVREGQGVVLLC---GPPPHSGELSY 157

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDVYVN 213
            W+ N  P S    + RR V      + I  +  SD GNY C  T+++    V       
Sbjct: 158 AWIFNEYP-SFVQEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNNRVLGSPTPL 216

Query: 214 VL-------AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           VL        + P+I  + P+      G TV L C   G P P++NW  +       +  
Sbjct: 217 VLRTDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIK 276

Query: 266 ILET-GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
           + ++ G L+I +    D+G Y C A N  G     G LT     H     +D E     +
Sbjct: 277 MRKSNGMLEIPNFQQEDTGLYECIAENSRGKNIARGRLTYYAKPHWVQMIKDIEAAVEDN 336

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             + C A   P  K S  WL+  + +  E     VQ ++ +L++   +  DSG Y C A+
Sbjct: 337 LYWECRASGKP--KPSYRWLKNGDGLIVEER---VQIDNGALSIAVLNVNDSGMYQCIAE 391

Query: 385 TELDFIEAQATLTV 398
            +   I + A L V
Sbjct: 392 NKHGLIYSSAELKV 405



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 118/286 (41%), Gaps = 32/286 (11%)

Query: 123 LAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGP 179
           L  P F  EP    F   +EE+ +T  C+A G P P   W  NG  I  +     + +G 
Sbjct: 25  LQGPVFIREPSNNIFPVGSEEKKITLNCEAKGNPSPHYRWQLNGSDIDLSMDYRYKLIGG 84

Query: 180 NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVL 238
           N + I   R  D G Y C ATNSLG V         A+        +   +V +G+ VVL
Sbjct: 85  NLVVINPSRNRDIGTYQCFATNSLGTVVSKEAKLQFAYLEHFKTKMRSTVSVREGQGVVL 144

Query: 239 TCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCFA 289
            C     P P        WI N+     +    R+   ETG L I  V  +D G YTC  
Sbjct: 145 LC----GPPPHSGELSYAWIFNEYPSFVQEDSRRFVSQETGHLYIAKVEPSDVGNYTCVV 200

Query: 290 RNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSLK 338
            + +   +  GS   L ++    + +         PE      G +    C A+ +P  +
Sbjct: 201 TSTVTNNRVLGSPTPLVLRTDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVPQ 260

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           ++  W R S+ + F S+ +  +SN   L +    + D+G Y C A+
Sbjct: 261 IN--WRR-SDGLPFSSKIKMRKSNGM-LEIPNFQQEDTGLYECIAE 302



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 145/636 (22%), Positives = 230/636 (36%), Gaps = 90/636 (14%)

Query: 41   KKEVALRNKKVELF-CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
            KK + ++   + +F C    +P     W K    +  S+R +    G  L I +V   D 
Sbjct: 418  KKLIQVQIGSLVIFDCKPKASPKAHCSWKKGDEILQSSERTAILKDG-GLQIANVTKLDV 476

Query: 100  GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI-- 157
            G+YTC   N  G+A S S  L V      T+ P  ++ +  E+V   C+    P  +I  
Sbjct: 477  GTYTCIAENQFGKASS-STKLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDIVF 535

Query: 158  HWVHNGKPIS-QAPPNPRRKVGPNR---ITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
             W  NG     +   +   KVG +    + I N++   +G Y C     +  V     + 
Sbjct: 536  TWYFNGAITDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTEVDSVSSAADL- 594

Query: 214  VLAHAPEITEAPKDEYTVDGKTVV-----------LTCRVFGAPKP-EVNWIHNQKELTG 261
            ++  +P   E+ K +   D    +           +T  V  A  P  V W    + +T 
Sbjct: 595  IVRGSPGPPESVKVDEITDTTAQLSWKEGTDNHSPITSYVIQARTPFSVGW----QIVT- 649

Query: 262  GRYTILETGDLKITDVAFADSG-----EYTCFARNKLGTAQGS-GSLTVKEHTHITDQPE 315
               T+ +T D K       D       E+   A NK+G  + S  S  V+    + + P 
Sbjct: 650  ---TVPDTIDGKTFTATVVDLNPWVEYEFRVVANNKIGGGEPSLPSEKVRTEEAVPEVPP 706

Query: 316  DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
              EV  G  +        DP  +     L+  E   +    R +    +  TV  S   D
Sbjct: 707  S-EVSGGGGSRSELVITWDPVPEE----LQNGEGFGYVVAFRPLGVTTWIQTVVTSP--D 759

Query: 376  SGQYTCRAQTELDFIEAQATLTV-------------------QVPLEAPSNFTLIQVIDA 416
            + +Y  R ++ L F   +  + V                   + P  APS+  L   + +
Sbjct: 760  TPRYVFRNESILSFSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSH-VLANSLSS 818

Query: 417  KKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
                VSW+ +  +   G   GY+++ W     E S   + V  G  TT  +         
Sbjct: 819  SIIEVSWDAIPWKMSSGRLLGYEIRYWNNGGKEDSSNRVKV-MGNETTARLQGLQSNLVY 877

Query: 477  FARVLAFNGAYNGPPSEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQP 530
            +  V A+N A  GP S  ++  T    P   PG V          S   + W  VK    
Sbjct: 878  YTAVRAYNSAGTGPFSATVNATTKKMPPSQPPGNV----VWNATESKVLINWEQVKAMDN 933

Query: 531  NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGD 590
               + GYK+ Y++     +         I +   TSA+L  L  +  Y I +   T  GD
Sbjct: 934  ESEVTGYKVFYRTSSQNNMN--------ILNTNKTSAELL-LPVNEDYIIEVKASTDGGD 984

Query: 591  GAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
            G  S+ +      N D   G GS        W A P
Sbjct: 985  GTSSEQIRIPRITNMD-ARGSGSA------VWNAYP 1013


>gi|27805871|ref|NP_776705.1| contactin-1 precursor [Bos taurus]
 gi|55976304|sp|Q28106.1|CNTN1_BOVIN RecName: Full=Contactin-1; AltName: Full=Neural cell surface
           protein F3; Flags: Precursor
 gi|1060861|dbj|BAA06861.1| F3/F11/Contactin [Bos taurus]
          Length = 1018

 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 182/718 (25%), Positives = 285/718 (39%), Gaps = 80/718 (11%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 241 PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 298

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 299 NIQLEDEGIYECEAENNRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 354

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG          R ++    +T EN      G Y C A N+ G +Y +
Sbjct: 355 TGKPIPTIRWLKNGYSYH------RGELRLYDVTFEN-----AGMYQCIAENTHGAIYAN 403

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP   W    + L    R  I
Sbjct: 404 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPTFLWSKGTERLVNSSRILI 463

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++  +D G YTCF  N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 464 WEDGSLEINNITRSDGGVYTCFVENNKGKANSTGTLVITDPTRIILAPINADITVGENAT 523

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ VW      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 524 MQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 583

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
            AQT +D   A A L V+ P   P     I+ I A    ++W+  S          Y +Q
Sbjct: 584 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYTIQ 640

Query: 442 TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
           T T    D + +  +  + +G          +P  +   RV+A N    G PS   + + 
Sbjct: 641 TKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIK 700

Query: 500 PEGVPGTVQSLEAIPLGSS--AFYLKWVKPEQPNGVL--MGYKIKYQSVKGTKVGPLLER 555
            +G    V   +    G S     + W    +        GY + ++   G +   +   
Sbjct: 701 TDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYFNNFGYIVAFKPFDGEEWKKVTVT 760

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTP 615
            P   D      K   + PST +++ +  +   GDG  S  L  V     D        P
Sbjct: 761 NP---DTGRYVHKDETMRPSTAFQVKVKAFNNKGDGPYS--LTAVIHSAQD---APSEAP 812

Query: 616 NNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYE 675
             + +   +  EI  +  H   +I                                + Y+
Sbjct: 813 TAVGVKVLSSSEISVHWEHVVEKI-------------------------------VESYQ 841

Query: 676 IKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 733
           I+    W   D E +   + V   E  +  ++  +P ++ F  V A N A  GPPS++
Sbjct: 842 IRY---WASHDKEAAAHRVQVASQE-YSARLENLLPDTQYFVEVRACNSAGCGPPSDM 895



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 152/657 (23%), Positives = 249/657 (37%), Gaps = 85/657 (12%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 189 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTKPYPADIVV 246

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  + A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 247 QFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 303

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N+ G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 304 DEGIYECEAENNRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 362

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 363 RWLKN-----GYSY---HRGELRLYDVTFENAGMYQCIAENTHGAIYANAELKILALAPT 414

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K + +W +G+E +   S  R +   D SL 
Sbjct: 415 FEMNPMKKKILAAKGGRVIIECKPKAAP--KPTFLWSKGTERLVNSS--RILIWEDGSLE 470

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC  +       +  TL +  P   + AP N  +    +A  +   S+
Sbjct: 471 INNITRSDGGVYTCFVENNKGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASF 530

Query: 424 NPVSPQSLRGHFRGYKVQ-----------TWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
           +P    +    F GY +               + +GE  IR   +      T      V 
Sbjct: 531 DPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVD 590

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
            S   A ++                    G PG    L    + +++  L W +    + 
Sbjct: 591 NSSASADLVV------------------RGPPGPPGGLRIEDIRATSVALTWSRGSDNHS 632

Query: 533 VLMGYKIKYQSV-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
            +  Y I+ +++     K  K  P     P I +    +A+   L P  +Y   +     
Sbjct: 633 PISKYTIQTKTILSDDWKDAKTDP-----PII-EGNMEAARAVDLIPWMEYEFRVVATNT 686

Query: 588 AGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            G G  S      K     P   P +V G G +   L I+W  +    H   +F Y + +
Sbjct: 687 LGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYFNNFGYIVAF 746

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
           +  + GE W +  V +      V  ++ T +P   +++KV     + DG  S+  +I
Sbjct: 747 KPFD-GEEWKKVTVTNPDTGRYVHKDE-TMRPSTAFQVKVKAFNNKGDGPYSLTAVI 801



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 139/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   I+  SDR S    G +L+I + +   D G Y C  S
Sbjct: 60  KVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 117

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 118 NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 171

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 172 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 228

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 229 LIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 288

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 289 STSGAVLKIFNIQLEDEGIYECEAENNRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 348

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+         E R      Y +T       ++G Y C A+ 
Sbjct: 349 YWPCVATGKPI--PTIRWLKNGYSY-HRGELRL-----YDVTFE-----NAGMYQCIAEN 395

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 396 THGAIYANAELKI 408



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   I     +    VG N +   
Sbjct: 47  PINTIYPE---ESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTS-DRYSMVGGNLVINN 102

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   +
Sbjct: 103 PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 162

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 163 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 222

Query: 299 SGSL---------TVKEH-THITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                        T K +   I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 223 FSKFIPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV--PDIRWRKVLE 280

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 281 PMPSTAE---ISTSGAVLKIFNIQLEDEGIYECEAENNRGKDKHQARIYVQ 328



 Score = 40.8 bits (94), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+    ++V+ + +  V W  V  + +      Y+++ W   D E +   + V   
Sbjct: 808 PSEAPTAVG-VKVLSSSEISVHWEHVVEKIVES----YQIRYWASHDKEAAAHRVQVASQ 862

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GPPS++    T +  P     + +     S +
Sbjct: 863 E-YSARLENLLPDTQYFVEVRACNSAGCGPPSDMTETFTKKAPPSQPPRIISSVRSGSRY 921

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYK+ Y+
Sbjct: 922 IITWDHVVALSNESTVTGYKVLYR 945


>gi|148666975|gb|EDK99391.1| contactin 6, isoform CRA_a [Mus musculus]
          Length = 1028

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 178/718 (24%), Positives = 296/718 (41%), Gaps = 82/718 (11%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  ++L C   G P+P   W + DG P+    +I        L I   +  D+G Y 
Sbjct: 239 AAKDSSIKLECFALGNPVPDISWRRLDGSPM--PGKIKYSKSQAILEIPKFQQEDEGFYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G   +    L   A P +  + +    +  +++ +ECKASG P P   W+ NG
Sbjct: 297 CIAGNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDSLFWECKASGNPNPSYTWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++      R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 356 QRLNT---EERIQIENGTLIITMLNISDSGIYQCAAENKYQTIYANAELRVLASAPDFSK 412

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
            P  + +V   G  + + C+    PK  ++W    + L    R   LE G LKI +V  A
Sbjct: 413 NPIKKISVVQVGGDISIECKPNAFPKASISWKRGTENLKQSKRVLFLEDGSLKICNVTRA 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G  + SG L VKE T IT  P   +V  G+S    C    DP++++ 
Sbjct: 473 DAGSYTCVATNQFGNGKSSGGLVVKERTIITVPPSKMDVTVGESIVLPCQVSHDPTMEVL 532

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            VW    + ID +       R    +   L +       SG+Y C  QT L+ + A A +
Sbjct: 533 FVWYFNGDIIDLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADI 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW P  P +     + + +QT T          ++
Sbjct: 593 IVRGPPGPPEDVK-VEHISSTTSQLSWRP-GPDN-NSPIQIFTIQTRTPFSVGWQAVATV 649

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-----TPEGVPGTV 507
            E++   G++    V    P  +   RV+A N    G PS+    +      P   PG +
Sbjct: 650 PEIL--NGQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASVPNVAPGNI 707

Query: 508 QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565
                     S   + W  +  E  NG   GY + ++ V  T    + ER+  + + +  
Sbjct: 708 NGGGG---SRSELVITWEAIPEELQNGEGFGYIVMFRPVGTTAW--MKERVALV-ESSKF 761

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGST-----PNNLVI 620
             +   + P + + + +  Y   G+G+ S        ++   +  RG++      + + +
Sbjct: 762 IYRNESIMPLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEV 821

Query: 621 SWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQ 680
           SW A+                       AWN       R +  VL        YE   V 
Sbjct: 822 SWNAI-----------------------AWN-------RNTGRVLG-------YE---VL 841

Query: 681 TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
            WT+   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S  ++  T
Sbjct: 842 YWTDNSKESMIGKIRVS-GNVTTKNITGLRANTIYFASVRAYNTAGTGPSSPPVNVTT 898



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 161/653 (24%), Positives = 257/653 (39%), Gaps = 73/653 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L    VE SD G+YTC V+N             ++           P   V  PE I A
Sbjct: 180 NLYFAKVEPSDVGNYTCFVTNKEAHRSVQGPPTPLVLRTDGVMGEYEPKIEVRFPETIQA 239

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A++ ++  EC A G P P+I W   +G P+   P   +       + I   ++ D G Y 
Sbjct: 240 AKDSSIKLECFALGNPVPDISWRRLDGSPM---PGKIKYSKSQAILEIPKFQQEDEGFYE 296

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A N  G       + +    PE  +  ++ Y     ++   C+  G P P   W+ N 
Sbjct: 297 CIAGNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDSLFWECKASGNPNPSYTWLKNG 355

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQP- 314
           + L       +E G L IT +  +DSG Y C A NK  T   +  L V       +  P 
Sbjct: 356 QRLNTEERIQIENGTLIITMLNISDSGIYQCAAENKYQTIYANAELRVLASAPDFSKNPI 415

Query: 315 -EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +   V+ G   +  C   + P  K SI W RG+E  + +   R +   D SL +   + 
Sbjct: 416 KKISVVQVGGDISIECKPNAFP--KASISWKRGTE--NLKQSKRVLFLEDGSLKICNVTR 471

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV-----------VS 422
            D+G YTC A  +    ++   L V+         T+I V  +K  V           VS
Sbjct: 472 ADAGSYTCVATNQFGNGKSSGGLVVK-------ERTIITVPPSKMDVTVGESIVLPCQVS 524

Query: 423 WNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 477
            +P        +F G  +         E+ G  S+ +L++   +       K++   +  
Sbjct: 525 HDPTMEVLFVWYFNGDIIDLKKGVAHFERIGGESVGDLMIRNIQ--LGHSGKYLCTVQTT 582

Query: 478 ARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
              L+            ++ +   G PG  + ++   + S+   L W      N  +  +
Sbjct: 583 LERLS-----------AVADIIVRGPPGPPEDVKVEHISSTTSQLSWRPGPDNNSPIQIF 631

Query: 538 KIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK- 595
            I  Q+     VG   +  +P I +  T +A + GL P  +Y   +      G G  SK 
Sbjct: 632 TI--QTRTPFSVGWQAVATVPEILNGQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKP 689

Query: 596 -----YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
                    VP   P N+ G G + + LVI+W A+PE   N   F Y + +R   T  AW
Sbjct: 690 SELLRTKASVPNVAPGNINGGGGSRSELVITWEAIPEELQNGEGFGYIVMFRPVGT-TAW 748

Query: 651 NQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
            ++ V     S+ +  N+      P+E+KV       +GEGS+  + IV  GE
Sbjct: 749 MKERVALVESSKFIYRNESIMPLSPFEVKV--GVYNNEGEGSLSTVTIVYSGE 799



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 160/709 (22%), Positives = 272/709 (38%), Gaps = 70/709 (9%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  +N  +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 339  CKASGNPNPSYTWLKNGQRLNTEERIQIEN--GTLIITMLNISDSGIYQCAAENKY-QTI 395

Query: 115  SYSIDLSVLA-APYFTVEP-EFINAAE-EETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
              + +L VLA AP F+  P + I+  +    ++ ECK +  P+  I W    + + Q+  
Sbjct: 396  YANAELRVLASAPDFSKNPIKKISVVQVGGDISIECKPNAFPKASISWKRGTENLKQSKR 455

Query: 172  NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
                + G  +I   N+ ++D G+Y C ATN  G   K     V+     IT  P      
Sbjct: 456  VLFLEDGSLKIC--NVTRADAGSYTCVATNQFGN-GKSSGGLVVKERTIITVPPSKMDVT 512

Query: 232  DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
             G+++VL C+V   P  EV   W  N             E  GG       GDL I ++ 
Sbjct: 513  VGESIVLPCQVSHDPTMEVLFVWYFNGDIIDLKKGVAHFERIGGE----SVGDLMIRNIQ 568

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT----FRCNAVSD 334
               SG+Y C  +  L        + V+        PED +VE   S T    +R    ++
Sbjct: 569  LGHSGKYLCTVQTTLERLSAVADIIVRGPP---GPPEDVKVEHISSTTSQLSWRPGPDNN 625

Query: 335  PSLKLSIVWLRGSEPIDFESE---PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
              +++  +  R    + +++    P  +    Y+ TV   S     ++   A   +   E
Sbjct: 626  SPIQIFTIQTRTPFSVGWQAVATVPEILNGQTYNATVVGLSPWVEYEFRVVAGNNIGIGE 685

Query: 392  AQA-----TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
                         VP  AP N          + V++W  +  +   G   GY V      
Sbjct: 686  PSKPSELLRTKASVPNVAPGNINGGGG-SRSELVITWEAIPEELQNGEGFGYIVMFRPVG 744

Query: 447  DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVP-- 504
                    + + +        +  +P S    +V  +N    G  S +    + E  P  
Sbjct: 745  TTAWMKERVALVESSKFIYRNESIMPLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQL 804

Query: 505  ---GT-VQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKVGPLLERLPY 558
               GT VQS  A  +  S   + W    +  G ++GY++ Y   + K + +G +      
Sbjct: 805  APRGTSVQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDNSKESMIGKI-----R 856

Query: 559  ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGS 613
            +S   TT   + GL  +T Y   +  Y  AG G  S  +        P + P N+  + S
Sbjct: 857  VSGNVTTK-NITGLRANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLS 915

Query: 614  TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
              + L ++W  +  +E+ +    Y+I +R++      ++  +L+   +   L   P  + 
Sbjct: 916  N-SKLCLNWEHVKTMENESEVLGYKILYRQNRQ----SKTHILETNNTSAELL-VPFEED 969

Query: 674  YEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAF 722
            Y I++       DG  S    I      ++T V    P++++ + V  F
Sbjct: 970  YLIEIRTVSDGGDGSSSEEIRIPKMSSLSSTGVQISKPSTQSLSMVGVF 1018



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 90/378 (23%), Positives = 135/378 (35%), Gaps = 40/378 (10%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS-DQGSYTC 104
           L   ++ L C   G P P   W ++G  I+          G SL I       D G Y C
Sbjct: 41  LSRSEIILTCTANGYPSPHYRWKQNGTDIDFGMTYHYRLDGGSLAISSPRTDQDIGIYQC 100

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHW 159
             +N VG   S    L       F T     ++  E + V   C   G P    E    W
Sbjct: 101 LATNPVGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLC---GPPPHFGELSYAW 157

Query: 160 VHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGY------------ 205
             N  P+     + RR V  +   +    +  SD GNY C  TN   +            
Sbjct: 158 TFNDSPL-YVQEDKRRFVSQDTGNLYFAKVEPSDVGNYTCFVTNKEAHRSVQGPPTPLVL 216

Query: 206 ----VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG 261
               V  +    +    PE  +A KD       ++ L C   G P P+++W         
Sbjct: 217 RTDGVMGEYEPKIEVRFPETIQAAKD------SSIKLECFALGNPVPDISWRRLDGSPMP 270

Query: 262 GRYTILET-GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
           G+    ++   L+I      D G Y C A N  G     G L          + ++  + 
Sbjct: 271 GKIKYSKSQAILEIPKFQQEDEGFYECIAGNLRGRNLAKGQLIFYAPPEWEQKIQNTYLS 330

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
              S  + C A  +P+   S  WL+  + ++ E     +Q  + +L +T  +  DSG Y 
Sbjct: 331 IYDSLFWECKASGNPN--PSYTWLKNGQRLNTEER---IQIENGTLIITMLNISDSGIYQ 385

Query: 381 CRAQTELDFIEAQATLTV 398
           C A+ +   I A A L V
Sbjct: 386 CAAENKYQTIYANAELRV 403



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 101/285 (35%), Gaps = 32/285 (11%)

Query: 123 LAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGP 179
            + P F  EP+   F        +   C A+G P P   W  NG  I        R  G 
Sbjct: 23  FSRPIFIQEPQDVIFPLDLSRSEIILTCTANGYPSPHYRWKQNGTDIDFGMTYHYRLDGG 82

Query: 180 NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVL 238
           +          D G Y C ATN +G +         A+  +     +   +V +G+ VVL
Sbjct: 83  SLAISSPRTDQDIGIYQCLATNPVGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVL 142

Query: 239 TCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCFA 289
            C     P P        W  N   L       R+   +TG+L    V  +D G YTCF 
Sbjct: 143 LC----GPPPHFGELSYAWTFNDSPLYVQEDKRRFVSQDTGNLYFAKVEPSDVGNYTCFV 198

Query: 290 RNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSLK 338
            NK    + QG  +  V     +  +         PE  +     S    C A+ +P   
Sbjct: 199 TNKEAHRSVQGPPTPLVLRTDGVMGEYEPKIEVRFPETIQAAKDSSIKLECFALGNPVPD 258

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +S   L GS       + ++ +S    L + K  + D G Y C A
Sbjct: 259 ISWRRLDGSP---MPGKIKYSKSQAI-LEIPKFQQEDEGFYECIA 299


>gi|148666976|gb|EDK99392.1| contactin 6, isoform CRA_b [Mus musculus]
          Length = 1033

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 178/718 (24%), Positives = 296/718 (41%), Gaps = 82/718 (11%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  ++L C   G P+P   W + DG P+    +I        L I   +  D+G Y 
Sbjct: 244 AAKDSSIKLECFALGNPVPDISWRRLDGSPM--PGKIKYSKSQAILEIPKFQQEDEGFYE 301

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G   +    L   A P +  + +    +  +++ +ECKASG P P   W+ NG
Sbjct: 302 CIAGNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDSLFWECKASGNPNPSYTWLKNG 360

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++      R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 361 QRLNT---EERIQIENGTLIITMLNISDSGIYQCAAENKYQTIYANAELRVLASAPDFSK 417

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
            P  + +V   G  + + C+    PK  ++W    + L    R   LE G LKI +V  A
Sbjct: 418 NPIKKISVVQVGGDISIECKPNAFPKASISWKRGTENLKQSKRVLFLEDGSLKICNVTRA 477

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G  + SG L VKE T IT  P   +V  G+S    C    DP++++ 
Sbjct: 478 DAGSYTCVATNQFGNGKSSGGLVVKERTIITVPPSKMDVTVGESIVLPCQVSHDPTMEVL 537

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            VW    + ID +       R    +   L +       SG+Y C  QT L+ + A A +
Sbjct: 538 FVWYFNGDIIDLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADI 597

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW P  P +     + + +QT T          ++
Sbjct: 598 IVRGPPGPPEDVK-VEHISSTTSQLSWRP-GPDN-NSPIQIFTIQTRTPFSVGWQAVATV 654

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-----TPEGVPGTV 507
            E++   G++    V    P  +   RV+A N    G PS+    +      P   PG +
Sbjct: 655 PEIL--NGQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASVPNVAPGNI 712

Query: 508 QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565
                     S   + W  +  E  NG   GY + ++ V  T    + ER+  + + +  
Sbjct: 713 NGGGG---SRSELVITWEAIPEELQNGEGFGYIVMFRPVGTTAW--MKERVALV-ESSKF 766

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGST-----PNNLVI 620
             +   + P + + + +  Y   G+G+ S        ++   +  RG++      + + +
Sbjct: 767 IYRNESIMPLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEV 826

Query: 621 SWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQ 680
           SW A+                       AWN       R +  VL        YE   V 
Sbjct: 827 SWNAI-----------------------AWN-------RNTGRVLG-------YE---VL 846

Query: 681 TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
            WT+   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S  ++  T
Sbjct: 847 YWTDNSKESMIGKIRVS-GNVTTKNITGLRANTIYFASVRAYNTAGTGPSSPPVNVTT 903



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 161/653 (24%), Positives = 257/653 (39%), Gaps = 73/653 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L    VE SD G+YTC V+N             ++           P   V  PE I A
Sbjct: 185 NLYFAKVEPSDVGNYTCFVTNKEAHRSVQGPPTPLVLRTDGVMGEYEPKIEVRFPETIQA 244

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A++ ++  EC A G P P+I W   +G P+   P   +       + I   ++ D G Y 
Sbjct: 245 AKDSSIKLECFALGNPVPDISWRRLDGSPM---PGKIKYSKSQAILEIPKFQQEDEGFYE 301

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A N  G       + +    PE  +  ++ Y     ++   C+  G P P   W+ N 
Sbjct: 302 CIAGNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDSLFWECKASGNPNPSYTWLKNG 360

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQP- 314
           + L       +E G L IT +  +DSG Y C A NK  T   +  L V       +  P 
Sbjct: 361 QRLNTEERIQIENGTLIITMLNISDSGIYQCAAENKYQTIYANAELRVLASAPDFSKNPI 420

Query: 315 -EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +   V+ G   +  C   + P  K SI W RG+E  + +   R +   D SL +   + 
Sbjct: 421 KKISVVQVGGDISIECKPNAFP--KASISWKRGTE--NLKQSKRVLFLEDGSLKICNVTR 476

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV-----------VS 422
            D+G YTC A  +    ++   L V+         T+I V  +K  V           VS
Sbjct: 477 ADAGSYTCVATNQFGNGKSSGGLVVK-------ERTIITVPPSKMDVTVGESIVLPCQVS 529

Query: 423 WNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 477
            +P        +F G  +         E+ G  S+ +L++   +       K++   +  
Sbjct: 530 HDPTMEVLFVWYFNGDIIDLKKGVAHFERIGGESVGDLMIRNIQ--LGHSGKYLCTVQTT 587

Query: 478 ARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
              L+            ++ +   G PG  + ++   + S+   L W      N  +  +
Sbjct: 588 LERLS-----------AVADIIVRGPPGPPEDVKVEHISSTTSQLSWRPGPDNNSPIQIF 636

Query: 538 KIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK- 595
            I  Q+     VG   +  +P I +  T +A + GL P  +Y   +      G G  SK 
Sbjct: 637 TI--QTRTPFSVGWQAVATVPEILNGQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKP 694

Query: 596 -----YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
                    VP   P N+ G G + + LVI+W A+PE   N   F Y + +R   T  AW
Sbjct: 695 SELLRTKASVPNVAPGNINGGGGSRSELVITWEAIPEELQNGEGFGYIVMFRPVGT-TAW 753

Query: 651 NQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
            ++ V     S+ +  N+      P+E+KV       +GEGS+  + IV  GE
Sbjct: 754 MKERVALVESSKFIYRNESIMPLSPFEVKV--GVYNNEGEGSLSTVTIVYSGE 804



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 146/631 (23%), Positives = 243/631 (38%), Gaps = 65/631 (10%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +N  +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 344 CKASGNPNPSYTWLKNGQRLNTEERIQIEN--GTLIITMLNISDSGIYQCAAENKY-QTI 400

Query: 115 SYSIDLSVLA-APYFTVEP-EFINAAE-EETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
             + +L VLA AP F+  P + I+  +    ++ ECK +  P+  I W    + + Q+  
Sbjct: 401 YANAELRVLASAPDFSKNPIKKISVVQVGGDISIECKPNAFPKASISWKRGTENLKQSKR 460

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
               + G  +I   N+ ++D G+Y C ATN  G   K     V+     IT  P      
Sbjct: 461 VLFLEDGSLKIC--NVTRADAGSYTCVATNQFGN-GKSSGGLVVKERTIITVPPSKMDVT 517

Query: 232 DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
            G+++VL C+V   P  EV   W  N             E  GG       GDL I ++ 
Sbjct: 518 VGESIVLPCQVSHDPTMEVLFVWYFNGDIIDLKKGVAHFERIGGE----SVGDLMIRNIQ 573

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT----FRCNAVSD 334
              SG+Y C  +  L        + V+        PED +VE   S T    +R    ++
Sbjct: 574 LGHSGKYLCTVQTTLERLSAVADIIVRGPP---GPPEDVKVEHISSTTSQLSWRPGPDNN 630

Query: 335 PSLKLSIVWLRGSEPIDFESE---PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
             +++  +  R    + +++    P  +    Y+ TV   S     ++   A   +   E
Sbjct: 631 SPIQIFTIQTRTPFSVGWQAVATVPEILNGQTYNATVVGLSPWVEYEFRVVAGNNIGIGE 690

Query: 392 AQA-----TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
                        VP  AP N          + V++W  +  +   G   GY V      
Sbjct: 691 PSKPSELLRTKASVPNVAPGNINGGGG-SRSELVITWEAIPEELQNGEGFGYIVMFRPVG 749

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVP-- 504
                   + + +        +  +P S    +V  +N    G  S +    + E  P  
Sbjct: 750 TTAWMKERVALVESSKFIYRNESIMPLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQL 809

Query: 505 ---GT-VQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKVGPLLERLPY 558
              GT VQS  A  +  S   + W    +  G ++GY++ Y   + K + +G +      
Sbjct: 810 APRGTSVQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDNSKESMIGKI-----R 861

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGS 613
           +S   TT   + GL  +T Y   +  Y  AG G  S  +        P + P N+  + S
Sbjct: 862 VSGNVTTK-NITGLRANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLS 920

Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
             + L ++W  +  +E+ +    Y+I +R++
Sbjct: 921 N-SKLCLNWEHVKTMENESEVLGYKILYRQN 950



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 90/378 (23%), Positives = 135/378 (35%), Gaps = 40/378 (10%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS-DQGSYTC 104
           L   ++ L C   G P P   W ++G  I+          G SL I       D G Y C
Sbjct: 46  LSRSEIILTCTANGYPSPHYRWKQNGTDIDFGMTYHYRLDGGSLAISSPRTDQDIGIYQC 105

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHW 159
             +N VG   S    L       F T     ++  E + V   C   G P    E    W
Sbjct: 106 LATNPVGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLC---GPPPHFGELSYAW 162

Query: 160 VHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGY------------ 205
             N  P+     + RR V  +   +    +  SD GNY C  TN   +            
Sbjct: 163 TFNDSPL-YVQEDKRRFVSQDTGNLYFAKVEPSDVGNYTCFVTNKEAHRSVQGPPTPLVL 221

Query: 206 ----VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG 261
               V  +    +    PE  +A KD       ++ L C   G P P+++W         
Sbjct: 222 RTDGVMGEYEPKIEVRFPETIQAAKD------SSIKLECFALGNPVPDISWRRLDGSPMP 275

Query: 262 GRYTILET-GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
           G+    ++   L+I      D G Y C A N  G     G L          + ++  + 
Sbjct: 276 GKIKYSKSQAILEIPKFQQEDEGFYECIAGNLRGRNLAKGQLIFYAPPEWEQKIQNTYLS 335

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
              S  + C A  +P+   S  WL+  + ++ E     +Q  + +L +T  +  DSG Y 
Sbjct: 336 IYDSLFWECKASGNPN--PSYTWLKNGQRLNTEER---IQIENGTLIITMLNISDSGIYQ 390

Query: 381 CRAQTELDFIEAQATLTV 398
           C A+ +   I A A L V
Sbjct: 391 CAAENKYQTIYANAELRV 408



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 14/190 (7%)

Query: 409 TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
           T +Q   A +  VSWN ++     G   GY+V  WT+   E  I ++ V+ G  TT  + 
Sbjct: 814 TSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDNSKESMIGKIRVS-GNVTTKNIT 872

Query: 469 KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VK 526
                +  FA V A+N A  GP S  ++  T +  P    +  A  L +S   L W  VK
Sbjct: 873 GLRANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLSNSKLCLNWEHVK 932

Query: 527 PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGY 585
             +    ++GYKI Y+  + +K         +I +   TSA+L  L P    Y I +   
Sbjct: 933 TMENESEVLGYKILYRQNRQSKT--------HILETNNTSAEL--LVPFEEDYLIEIRTV 982

Query: 586 TKAGDGAESK 595
           +  GDG+ S+
Sbjct: 983 SDGGDGSSSE 992



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 101/285 (35%), Gaps = 32/285 (11%)

Query: 123 LAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGP 179
            + P F  EP+   F        +   C A+G P P   W  NG  I        R  G 
Sbjct: 28  FSRPIFIQEPQDVIFPLDLSRSEIILTCTANGYPSPHYRWKQNGTDIDFGMTYHYRLDGG 87

Query: 180 NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVL 238
           +          D G Y C ATN +G +         A+  +     +   +V +G+ VVL
Sbjct: 88  SLAISSPRTDQDIGIYQCLATNPVGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVL 147

Query: 239 TCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCFA 289
            C     P P        W  N   L       R+   +TG+L    V  +D G YTCF 
Sbjct: 148 LC----GPPPHFGELSYAWTFNDSPLYVQEDKRRFVSQDTGNLYFAKVEPSDVGNYTCFV 203

Query: 290 RNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSLK 338
            NK    + QG  +  V     +  +         PE  +     S    C A+ +P   
Sbjct: 204 TNKEAHRSVQGPPTPLVLRTDGVMGEYEPKIEVRFPETIQAAKDSSIKLECFALGNPVPD 263

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +S   L GS       + ++ +S    L + K  + D G Y C A
Sbjct: 264 ISWRRLDGS---PMPGKIKYSKSQAI-LEIPKFQQEDEGFYECIA 304


>gi|296230542|ref|XP_002760749.1| PREDICTED: contactin-2 [Callithrix jacchus]
          Length = 1040

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 168/623 (26%), Positives = 265/623 (42%), Gaps = 45/623 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWATAE----PTLQIPSVSFEDEGTYEC 306

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           E  N  G   +    + V A P +        A     + + C A+G P P + W+ NG+
Sbjct: 307 EAENSKGR-DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPAVRWLRNGE 365

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           P++      R +V    +    L   D+G Y C A N  G +Y    + V A AP+    
Sbjct: 366 PLAS---QNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLN 422

Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           P         G  +V+ C+   APK  V W    + L    R T+   G L I +++ +D
Sbjct: 423 PVRRLIPAARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLVIRNISRSD 482

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP++ L+ 
Sbjct: 483 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGDNLTLQCHASHDPTMDLTF 542

Query: 342 VWLRGSEPIDFES-----EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W     PIDF+          V+     LT+  +     G+Y C AQT +D    +AT+
Sbjct: 543 TWTLDDFPIDFDKPGGHYRRTSVKETIGDLTILNAQLRHGGKYACMAQTVVDSASKEATV 602

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GSIR 453
            V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G+   +R
Sbjct: 603 LVRGPPGPPGGVVVRDIGDTTIQ-LSWS----RGFDNHSPIAKYILQARTPPAGKWKQVR 657

Query: 454 ELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGVPGTVQ 508
               N +G + T +V    P      RV+A N    G  +GP S+I    T E VP    
Sbjct: 658 TNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKI---RTKEAVPSVAP 714

Query: 509 SLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565
           S  +   G+     + W  +  E  NG   GY + ++    T       R+P  +D    
Sbjct: 715 SGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQ--TARVPG-ADAQYF 771

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGSTPNNLVI 620
                 + P   + + +  Y + GDG ES   L Y     P   P  V  +G + + + +
Sbjct: 772 VYSNESVRPYMPFEVKIRSYNRRGDGPESLTALVYSAEEEPKVAPTKVWAKGVSSSEMNV 831

Query: 621 SWTAMPEIEHNAPHFKYRI-FWR 642
           +W  + + E N     Y I +WR
Sbjct: 832 TWEPVQQ-EMNGILLGYEIRYWR 853



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 148/374 (39%), Gaps = 38/374 (10%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           ++V L C    +P     W  +G  + + P  R  Q   G  +I+   +  D G Y C  
Sbjct: 55  EQVLLACRARASPPATYRWKMNGTDMKLEPGSR-HQLVGGNLVIMNPTKAQDAGVYQCLA 113

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIH------- 158
           SN VG   S    L       F    EF     +   T E     LP  P  H       
Sbjct: 114 SNPVGTVVSREAVLR------FGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYR 167

Query: 159 WVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY----- 211
           W+ N  P +  P + R  V      + I     SD GNY C AT+ + +  K V+     
Sbjct: 168 WLLNEFP-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQ 226

Query: 212 VNVLAH-----APEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           +N+ A      AP I    P + Y + G+ V L C  FG P P + W      L+    T
Sbjct: 227 LNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWAT 286

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
              T  L+I  V+F D G Y C A N  G     G + V+          D E + G + 
Sbjct: 287 AEPT--LQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNL 344

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P  + ++ WLR  EP+  ++    +  +   L  +K S  DSG Y C A+ 
Sbjct: 345 RWGCAAAGKP--RPAVRWLRNGEPLASQNRVEVLAGD---LRFSKLSLEDSGMYQCVAEN 399

Query: 386 ELDFIEAQATLTVQ 399
           +   I A A L VQ
Sbjct: 400 KHGTIYASAELAVQ 413



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 143/656 (21%), Positives = 230/656 (35%), Gaps = 79/656 (12%)

Query: 88  SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
           +L I     SD G+Y+C      + S     +K   ++L+     L AP      P    
Sbjct: 191 NLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDTRLFAPSIKARFPAETY 250

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + VT EC A G P P I W      +S     P+       + I ++   D G Y 
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-----PQWATAEPTLQIPSVSFEDEGTYE 305

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V A  PE  +   D     G  +   C   G P+P V W+ N 
Sbjct: 306 CEAENSKGRDTVQGRIIVQAQ-PEWLKVISDTEADIGSNLRWGCAAAGKPRPAVRWLRNG 364

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
           + L       +  GDL+ + ++  DSG Y C A NK GT   S  L V+         P 
Sbjct: 365 EPLASQNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPV 424

Query: 316 DYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
              + A  G      C   + P  K  ++W +G+E +   S  R   + D +L +   S 
Sbjct: 425 RRLIPAARGGEIVIPCQPRAAP--KAVVLWSKGTEILVNSS--RVTVTPDGTLVIRNISR 480

Query: 374 LD-----------------SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDA 416
            D                 +G  + R  T++    + A + V   L    + +    +D 
Sbjct: 481 SDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGDNLTLQCHASHDPTMDL 540

Query: 417 KKAVVSWN----PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
                +W     P+      GH+R   V+   E  G+ +I    +  G          V 
Sbjct: 541 ---TFTWTLDDFPIDFDKPGGHYRRTSVK---ETIGDLTILNAQLRHGGKYACMAQTVVD 594

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
           ++   A VL                            +    +G +   L W +    + 
Sbjct: 595 SASKEATVLVRGPPG------------------PPGGVVVRDIGDTTIQLSWSRGFDNHS 636

Query: 533 VLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 592
            +  Y ++ ++    K   +    P   +    +A++ GL P   Y   +      G G 
Sbjct: 637 PIAKYILQARTPPAGKWKQVRTN-PANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGE 695

Query: 593 ES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
            S      +    VP   P  + G G  P  L+++WT M     N   F Y + +RR  +
Sbjct: 696 PSGPSSKIRTKEAVPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGS 755

Query: 647 GEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
              W    V        V +N+    + P+E+K+       DG  S+  L+ +  E
Sbjct: 756 TH-WQTARVPGADAQYFVYSNESVRPYMPFEVKIRSYNRRGDGPESLTALVYSAEE 810



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 114/298 (38%), Gaps = 34/298 (11%)

Query: 126 PYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
           P F  +P    F   + EE V   C+A   P     W  NG  +   P +  + VG N +
Sbjct: 37  PVFEDQPLSVLFPEESTEEQVLLACRARASPPATYRWKMNGTDMKLEPGSRHQLVGGNLV 96

Query: 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTCR 241
            +   +  D G Y C A+N +G V     V       E ++  +D   T +G  V+L C 
Sbjct: 97  IMNPTKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCN 156

Query: 242 VFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGTA 296
                P     W+ N+      T GR+ + + TG+L I     +D G Y+C A + +  +
Sbjct: 157 PPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFS 216

Query: 297 QGSGSLTVKEHTHITDQPEDYEVEA---------------GQSATFRCNAVSDPSLKLSI 341
             S      +   +    ED  + A               GQ  T  C A  +P  +  I
Sbjct: 217 TKS---VFSKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPR--I 271

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            W +    +D    P++  + + +L +   S  D G Y C A+        Q  + VQ
Sbjct: 272 KWRK----VDGSLSPQWATA-EPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQ 324



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 20/184 (10%)

Query: 420 VVSWNPVSPQSLRGHFRGYKVQ-------TWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
           +V+W P+S +   G   GY +         W      G+  +  V   ES    V  ++P
Sbjct: 728 IVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPGADAQYFVYSNES----VRPYMP 783

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP- 530
                 ++ ++N   +GP S      + E  P    + + A  + SS   + W   +Q  
Sbjct: 784 FE---VKIRSYNRRGDGPESLTALVYSAEEEPKVAPTKVWAKGVSSSEMNVTWEPVQQEM 840

Query: 531 NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGD 590
           NG+L+GY+I+Y      +      R   +     TSA+++GL PSTKY + +  Y +AG 
Sbjct: 841 NGILLGYEIRYWRAGDKEAAADRVRTAGLD----TSARVSGLHPSTKYHVTVRAYNRAGT 896

Query: 591 GAES 594
           G  S
Sbjct: 897 GPAS 900



 Score = 47.0 bits (110), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 4/132 (3%)

Query: 414 IDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPA 473
           + + +  V+W PV  Q + G   GY+++ W   D E +  + +   G  T+  V    P+
Sbjct: 824 VSSSEMNVTWEPVQ-QEMNGILLGYEIRYWRAGDKEAAA-DRVRTAGLDTSARVSGLHPS 881

Query: 474 SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPN 531
           +K    V A+N A  GP S   +  T + + G + +  +    SS+  +KW  V P +  
Sbjct: 882 TKYHVTVRAYNRAGTGPASPSANATTMKPLRGGLLATISWTFSSSSLSIKWDPVVPFRNE 941

Query: 532 GVLMGYKIKYQS 543
             + GYK+ YQ+
Sbjct: 942 SAVTGYKMLYQN 953


>gi|7209914|dbj|BAA92367.1| neural recognition molecule NB-3 [Mus musculus]
          Length = 1028

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 178/718 (24%), Positives = 296/718 (41%), Gaps = 82/718 (11%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  ++L C   G P+P   W + DG P+    +I        L I   +  D+G Y 
Sbjct: 239 AAKDSSIKLECFALGNPVPDISWRRLDGSPM--PGKIKYSKSQAILEIPKFQQEDEGFYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G   +    L   A P +  + +    +  +++ +ECKASG P P   W+ NG
Sbjct: 297 CIAGNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDSLFWECKASGNPNPSYTWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++      R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 356 QRLNT---EERIQIENGTLIITMLNISDSGIYQCAAENKYQTIYANAELRVLASAPDFSK 412

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
            P  + +V   G  + + C+    PK  ++W    + L    R   LE G LKI +V  A
Sbjct: 413 NPIKKISVVQVGGDISIECKPNAFPKASISWKRGTENLKQSKRVLFLEDGSLKICNVTRA 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G  + SG L VKE T IT  P   +V  G+S    C    DP++++ 
Sbjct: 473 DAGSYTCVATNQFGNGKSSGGLVVKERTIITVPPSKMDVTVGESIVLPCQVSHDPTMEVL 532

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            VW    + ID +       R    +   L +       SG+Y C  QT L+ + A A +
Sbjct: 533 FVWYFNGDIIDLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADI 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW P  P +     + + +QT T          ++
Sbjct: 593 IVRGPPGPPEDVK-VEHISSTTSQLSWRP-GPDN-NSPIQIFTIQTRTPFSVGWQAVATV 649

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-----TPEGVPGTV 507
            E++   G++    V    P  +   RV+A N    G PS+    +      P   PG +
Sbjct: 650 PEIL--NGQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASVPNVAPGNI 707

Query: 508 QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565
                     S   + W  +  E  NG   GY + ++ V  T    + ER+  + + +  
Sbjct: 708 NGGGG---SRSELVITWEAIPEELQNGEGFGYIVMFRPVGTTAW--MKERVALV-ESSKF 761

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGST-----PNNLVI 620
             +   + P + + + +  Y   G+G+ S        ++   +  RG++      + + +
Sbjct: 762 IYRNESIMPLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEV 821

Query: 621 SWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQ 680
           SW A+                       AWN       R +  VL        YE   V 
Sbjct: 822 SWNAI-----------------------AWN-------RNTGRVLG-------YE---VL 841

Query: 681 TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
            WT+   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S  ++  T
Sbjct: 842 YWTDNSKESMIGKIRVS-GNVTTKNITGLRANTIYFASVRAYNTAGTGPSSPPVNVTT 898



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 161/653 (24%), Positives = 257/653 (39%), Gaps = 73/653 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L    VE SD G+YTC V+N             ++           P   V  PE I A
Sbjct: 180 NLYFAKVEPSDVGNYTCFVTNKEAHRSVQGPPTPLVLRTDGVMGEYEPKIEVRFPETIQA 239

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A++ ++  EC A G P P+I W   +G P+   P   +       + I   ++ D G Y 
Sbjct: 240 AKDSSIKLECFALGNPVPDISWRRLDGSPM---PGKIKYSKSQAILEIPKFQQEDEGFYE 296

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A N  G       + +    PE  +  ++ Y     ++   C+  G P P   W+ N 
Sbjct: 297 CIAGNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDSLFWECKASGNPNPSYTWLKNG 355

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQP- 314
           + L       +E G L IT +  +DSG Y C A NK  T   +  L V       +  P 
Sbjct: 356 QRLNTEERIQIENGTLIITMLNISDSGIYQCAAENKYQTIYANAELRVLASAPDFSKNPI 415

Query: 315 -EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +   V+ G   +  C   + P  K SI W RG+E  + +   R +   D SL +   + 
Sbjct: 416 KKISVVQVGGDISIECKPNAFP--KASISWKRGTE--NLKQSKRVLFLEDGSLKICNVTR 471

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV-----------VS 422
            D+G YTC A  +    ++   L V+         T+I V  +K  V           VS
Sbjct: 472 ADAGSYTCVATNQFGNGKSSGGLVVK-------ERTIITVPPSKMDVTVGESIVLPCQVS 524

Query: 423 WNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 477
            +P        +F G  +         E+ G  S+ +L++   +       K++   +  
Sbjct: 525 HDPTMEVLFVWYFNGDIIDLKKGVAHFERIGGESVGDLMIRNIQ--LGHSGKYLCTVQTT 582

Query: 478 ARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
              L+            ++ +   G PG  + ++   + S+   L W      N  +  +
Sbjct: 583 LERLS-----------AVADIIVRGPPGPPEDVKVEHISSTTSQLSWRPGPDNNSPIQIF 631

Query: 538 KIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK- 595
            I  Q+     VG   +  +P I +  T +A + GL P  +Y   +      G G  SK 
Sbjct: 632 TI--QTRTPFSVGWQAVATVPEILNGQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKP 689

Query: 596 -----YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
                    VP   P N+ G G + + LVI+W A+PE   N   F Y + +R   T  AW
Sbjct: 690 SELLRTKASVPNVAPGNINGGGGSRSELVITWEAIPEELQNGEGFGYIVMFRPVGT-TAW 748

Query: 651 NQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
            ++ V     S+ +  N+      P+E+KV       +GEGS+  + IV  GE
Sbjct: 749 MKERVALVESSKFIYRNESIMPLSPFEVKV--GVYNNEGEGSLSTVTIVYSGE 799



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 160/709 (22%), Positives = 272/709 (38%), Gaps = 70/709 (9%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  +N  +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 339  CKASGNPNPSYTWLKNGQRLNTEERIQIEN--GTLIITMLNISDSGIYQCAAENKY-QTI 395

Query: 115  SYSIDLSVLA-APYFTVEP-EFINAAE-EETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
              + +L VLA AP F+  P + I+  +    ++ ECK +  P+  I W    + + Q+  
Sbjct: 396  YANAELRVLASAPDFSKNPIKKISVVQVGGDISIECKPNAFPKASISWKRGTENLKQSKR 455

Query: 172  NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
                + G  +I   N+ ++D G+Y C ATN  G   K     V+     IT  P      
Sbjct: 456  VLFLEDGSLKIC--NVTRADAGSYTCVATNQFGN-GKSSGGLVVKERTIITVPPSKMDVT 512

Query: 232  DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
             G+++VL C+V   P  EV   W  N             E  GG       GDL I ++ 
Sbjct: 513  VGESIVLPCQVSHDPTMEVLFVWYFNGDIIDLKKGVAHFERIGGE----SVGDLMIRNIQ 568

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT----FRCNAVSD 334
               SG+Y C  +  L        + V+        PED +VE   S T    +R    ++
Sbjct: 569  LGHSGKYLCTVQTTLERLSAVADIIVRGPP---GPPEDVKVEHISSTTSQLSWRPGPDNN 625

Query: 335  PSLKLSIVWLRGSEPIDFESE---PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
              +++  +  R    + +++    P  +    Y+ TV   S     ++   A   +   E
Sbjct: 626  SPIQIFTIQTRTPFSVGWQAVATVPEILNGQTYNATVVGLSPWVEYEFRVVAGNNIGIGE 685

Query: 392  AQA-----TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
                         VP  AP N          + V++W  +  +   G   GY V      
Sbjct: 686  PSKPSELLRTKASVPNVAPGNINGGGG-SRSELVITWEAIPEELQNGEGFGYIVMFRPVG 744

Query: 447  DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVP-- 504
                    + + +        +  +P S    +V  +N    G  S +    + E  P  
Sbjct: 745  TTAWMKERVALVESSKFIYRNESIMPLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQL 804

Query: 505  ---GT-VQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKVGPLLERLPY 558
               GT VQS  A  +  S   + W    +  G ++GY++ Y   + K + +G +      
Sbjct: 805  APRGTSVQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDNSKESMIGKI-----R 856

Query: 559  ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGS 613
            +S   TT   + GL  +T Y   +  Y  AG G  S  +        P + P N+  + S
Sbjct: 857  VSGNVTTK-NITGLRANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLS 915

Query: 614  TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
              + L ++W  +  +E+ +    Y+I +R++      ++  +L+   +   L   P  + 
Sbjct: 916  N-SKLCVNWEHVKTMENESEVLGYKILYRQNRQ----SKTHILETNNTSAELL-VPFEED 969

Query: 674  YEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAF 722
            Y I++       DG  S    I      ++T V    P++++ + V  F
Sbjct: 970  YLIEIRTVSDGGDGSSSEEIRIPKMSSLSSTGVQISKPSTQSLSMVGVF 1018



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 90/378 (23%), Positives = 135/378 (35%), Gaps = 40/378 (10%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS-DQGSYTC 104
           L   ++ L C   G P P   W ++G  I+          G SL I       D G Y C
Sbjct: 41  LSRSEIILTCTANGYPSPHYRWKQNGTDIDFGMTYHYRLDGGSLAISSPRTDQDIGIYQC 100

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHW 159
             +N VG   S    L       F T     ++  E + V   C   G P    E    W
Sbjct: 101 LATNPVGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLC---GPPPHFGELSYAW 157

Query: 160 VHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGY------------ 205
             N  P+     + RR V  +   +    +  SD GNY C  TN   +            
Sbjct: 158 TFNDSPL-YVQEDKRRFVSQDTGNLYFAKVEPSDVGNYTCFVTNKEAHRSVQGPPTPLVL 216

Query: 206 ----VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG 261
               V  +    +    PE  +A KD       ++ L C   G P P+++W         
Sbjct: 217 RTDGVMGEYEPKIEVRFPETIQAAKD------SSIKLECFALGNPVPDISWRRLDGSPMP 270

Query: 262 GRYTILET-GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
           G+    ++   L+I      D G Y C A N  G     G L          + ++  + 
Sbjct: 271 GKIKYSKSQAILEIPKFQQEDEGFYECIAGNLRGRNLAKGQLIFYAPPEWEQKIQNTYLS 330

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
              S  + C A  +P+   S  WL+  + ++ E     +Q  + +L +T  +  DSG Y 
Sbjct: 331 IYDSLFWECKASGNPN--PSYTWLKNGQRLNTEER---IQIENGTLIITMLNISDSGIYQ 385

Query: 381 CRAQTELDFIEAQATLTV 398
           C A+ +   I A A L V
Sbjct: 386 CAAENKYQTIYANAELRV 403



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 101/285 (35%), Gaps = 32/285 (11%)

Query: 123 LAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGP 179
            + P F  EP+   F        +   C A+G P P   W  NG  I        R  G 
Sbjct: 23  FSRPIFIQEPQDVIFPLDLSRSEIILTCTANGYPSPHYRWKQNGTDIDFGMTYHYRLDGG 82

Query: 180 NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVL 238
           +          D G Y C ATN +G +         A+  +     +   +V +G+ VVL
Sbjct: 83  SLAISSPRTDQDIGIYQCLATNPVGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVL 142

Query: 239 TCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCFA 289
            C     P P        W  N   L       R+   +TG+L    V  +D G YTCF 
Sbjct: 143 LC----GPPPHFGELSYAWTFNDSPLYVQEDKRRFVSQDTGNLYFAKVEPSDVGNYTCFV 198

Query: 290 RNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSLK 338
            NK    + QG  +  V     +  +         PE  +     S    C A+ +P   
Sbjct: 199 TNKEAHRSVQGPPTPLVLRTDGVMGEYEPKIEVRFPETIQAAKDSSIKLECFALGNPVPD 258

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +S   L GS       + ++ +S    L + K  + D G Y C A
Sbjct: 259 ISWRRLDGSP---MPGKIKYSKSQAI-LEIPKFQQEDEGFYECIA 299


>gi|348514836|ref|XP_003444946.1| PREDICTED: contactin-3-like [Oreochromis niloticus]
          Length = 1086

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 164/611 (26%), Positives = 253/611 (41%), Gaps = 49/611 (8%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V L C   G P+P+  W + +GVP     ++   N    L I   +  D G Y 
Sbjct: 302 AAKGSTVTLECFALGNPVPEITWRRANGVPFPSKVKMKYSN--AVLEIPSFQQDDTGGYE 359

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G+  + S  L+  A P +    +    A EE + +EC+A+G P+P   W+ NG
Sbjct: 360 CVAENKMGK-NTVSGRLAFYAKPQWVQTMKDTALAIEERLYWECRANGRPKPSYTWLKNG 418

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           +   Q     R  V    +++  L  SD G Y C A N  G +Y    + VLA  P+ T 
Sbjct: 419 Q---QLLSEDRIHVEDGVLSVSALTLSDAGMYQCVAENKHGVIYFAAELMVLASPPDFTG 475

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
                      G TV L C+    P   + W      + T  R T+   G L++ +V+ +
Sbjct: 476 NLLRALLKAKAGTTVTLECKPQAYPIASILWKKGNLPIHTNDRITLSPDGTLRLANVSKS 535

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTCFARN+ G +  +G L V + T I   P D E+  G+S    C   SDP L +S
Sbjct: 536 DAGSYTCFARNRFGMSSTTGRLLVTDPTRIIQGPVDTEIIVGESIVLPCQVASDPVLDVS 595

Query: 341 IVW-LRGSEPIDFESEPRFVQSNDYSLTVTKSSEL-DSGQYTCRAQTELDFIEAQATLTV 398
             W   G      +    FV        + ++ +L  +G+Y C   T+++ + A A L V
Sbjct: 596 FSWAFNGQLIAKGDGHFEFVGGRTAGDLMIRNIQLYHAGKYICVVDTDVESLSAVAVLIV 655

Query: 399 QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE-KDGEGSIREL-- 455
           + P   P + T+ +V D+  A ++W+P            Y +QT T    G   +  +  
Sbjct: 656 KGPPSPPDSVTVEEVTDS-TAQLAWSPGRDNG--SPITNYLIQTRTPFTVGWQRVNTVPE 712

Query: 456 IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-----ISFVTPEGVPGTVQSL 510
           I++    T T VD       +F RVLA N    G PS +          P+ VPG V   
Sbjct: 713 IIDGNTLTATVVDLNAWVEYDF-RVLAKNSVGVGEPSPVSVKTRTEDAVPDAVPGDVGGG 771

Query: 511 EAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQS---VKGTKV---GPLLERLPYISDP 562
                      + W  V  E  NG   GY I +++      T V    P   R  Y +D 
Sbjct: 772 GG---SRYELVITWEPVPEELQNGESFGYIIAFRAFGEASWTHVATSAPGASRYVYRND- 827

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNN 617
                    + P + + + +  Y   G G  S  +        P + P  V  R  + + 
Sbjct: 828 --------SIAPFSPFHVKVGTYNSKGQGPFSPVVTIYSAETEPSEKPAGVRARSVSASE 879

Query: 618 LVISWTAMPEI 628
           + ++W A+  I
Sbjct: 880 IEVNWQALSFI 890



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 171/636 (26%), Positives = 246/636 (38%), Gaps = 84/636 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L I  VE SD G+YTC V N + + K  S   S++           P   V  P+ + A
Sbjct: 243 NLYIAKVEPSDVGNYTCVVMNSITKGKVQSSPTSLILRTDGVMGEYEPKIEVNFPDNVPA 302

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+  TVT EC A G P PEI W   NG P    P   + K     + I + ++ DTG Y 
Sbjct: 303 AKGSTVTLECFALGNPVPEITWRRANGVPF---PSKVKMKYSNAVLEIPSFQQDDTGGYE 359

Query: 197 CNATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           C A N +G   K+     LA    P+  +  KD      + +   CR  G PKP   W+ 
Sbjct: 360 CVAENKMG---KNTVSGRLAFYAKPQWVQTMKDTALAIEERLYWECRANGRPKPSYTWLK 416

Query: 255 NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
           N ++L       +E G L ++ +  +D+G Y C A NK G    +  L V         P
Sbjct: 417 NGQQLLSEDRIHVEDGVLSVSALTLSDAGMYQCVAENKHGVIYFAAELMVLA------SP 470

Query: 315 EDY---------EVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
            D+         + +AG + T  C   + P    SI+W +G+ PI   +  R   S D +
Sbjct: 471 PDFTGNLLRALLKAKAGTTVTLECKPQAYP--IASILWKKGNLPI--HTNDRITLSPDGT 526

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV----V 421
           L +   S+ D+G YTC A+           L V  P          ++I  +  V    V
Sbjct: 527 LRLANVSKSDAGSYTCFARNRFGMSSTTGRLLVTDPTRIIQGPVDTEIIVGESIVLPCQV 586

Query: 422 SWNPVSPQSLRGHFRGYKVQ--------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPA 473
           + +PV   S    F G  +               G+  IR + +         VD  V +
Sbjct: 587 ASDPVLDVSFSWAFNGQLIAKGDGHFEFVGGRTAGDLMIRNIQLYHAGKYICVVDTDVES 646

Query: 474 SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV 533
               A ++       GPPS   S    E    T Q             L W  P + NG 
Sbjct: 647 LSAVAVLIV-----KGPPSPPDSVTVEEVTDSTAQ-------------LAW-SPGRDNGS 687

Query: 534 -LMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            +  Y I  Q+     VG   +  +P I D  T +A +  L    +Y   +      G G
Sbjct: 688 PITNYLI--QTRTPFTVGWQRVNTVPEIIDGNTLTATVVDLNAWVEYDFRVLAKNSVGVG 745

Query: 592 ------AESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
                  +++    VP   P +V G G +   LVI+W  +PE   N   F Y I +R   
Sbjct: 746 EPSPVSVKTRTEDAVPDAVPGDVGGGGGSRYELVITWEPVPEELQNGESFGYIIAFRAF- 804

Query: 646 TGEA-WNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
            GEA W          S  V  N     F P+ +KV
Sbjct: 805 -GEASWTHVATSAPGASRYVYRNDSIAPFSPFHVKV 839



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 152/672 (22%), Positives = 254/672 (37%), Gaps = 100/672 (14%)

Query: 34   KQQYVTRKKEVALR-NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
            K Q+V   K+ AL   +++   C   G P P   W K+G  +   DRI   +    L + 
Sbjct: 380  KPQWVQTMKDTALAIEERLYWECRANGRPKPSYTWLKNGQQLLSEDRIHVED--GVLSVS 437

Query: 93   HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEF--------INAAEEETVT 144
             +  SD G Y C   N  G    ++ +L VLA+P     P+F        + A    TVT
Sbjct: 438  ALTLSDAGMYQCVAENKHG-VIYFAAELMVLASP-----PDFTGNLLRALLKAKAGTTVT 491

Query: 145  FECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSL 203
             ECK    P   I W     PI     N R  + P+  + + N+ KSD G+Y C A N  
Sbjct: 492  LECKPQAYPIASILWKKGNLPIHT---NDRITLSPDGTLRLANVSKSDAGSYTCFARNRF 548

Query: 204  GYVYKDVYVNVLAHAP-EITEAPKDEYTVDGKTVVLTCRVFGAPKPEV--NWIHNQK--- 257
            G         +L   P  I + P D   + G+++VL C+V   P  +V  +W  N +   
Sbjct: 549  G--MSSTTGRLLVTDPTRIIQGPVDTEIIVGESIVLPCQVASDPVLDVSFSWAFNGQLIA 606

Query: 258  ------ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK------ 305
                  E  GGR      GDL I ++    +G+Y C     + +      L VK      
Sbjct: 607  KGDGHFEFVGGR----TAGDLMIRNIQLYHAGKYICVVDTDVESLSAVAVLIVKGPPSPP 662

Query: 306  ---EHTHITDQPEDYEVEAGQ-SATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS 361
                   +TD         G+ + +   N +       ++ W R        + P  +  
Sbjct: 663  DSVTVEEVTDSTAQLAWSPGRDNGSPITNYLIQTRTPFTVGWQR------VNTVPEIIDG 716

Query: 362  NDYSLTVTKSSELDSGQYTCRAQTELDF-----IEAQATLTVQVPLEAPSNFTLIQVIDA 416
            N  + TV   +      +   A+  +       +  +      VP   P +         
Sbjct: 717  NTLTATVVDLNAWVEYDFRVLAKNSVGVGEPSPVSVKTRTEDAVPDAVPGDVG-GGGGSR 775

Query: 417  KKAVVSWNPVSPQSLRGH-------FRGYKVQTWTE--KDGEGSIRELIVNKGESTTTEV 467
             + V++W PV  +   G        FR +   +WT       G+ R +  N         
Sbjct: 776  YELVITWEPVPEELQNGESFGYIIAFRAFGEASWTHVATSAPGASRYVYRN--------- 826

Query: 468  DKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVK 526
            D   P S    +V  +N    GP S +++  + E  P    + + A  + +S   + W  
Sbjct: 827  DSIAPFSPFHVKVGTYNSKGQGPFSPVVTIYSAETEPSEKPAGVRARSVSASEIEVNWQA 886

Query: 527  PEQPNGVLMGYKIKY--QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAG 584
                   ++GY++ Y     K   +G +  R+P+      TSA ++GL  +T+Y + ++ 
Sbjct: 887  LSFIPERVLGYEVAYWEDDTKPETMGKV--RVPW----NQTSATVSGLAGNTQYFLTVSA 940

Query: 585  YTKAGDGAESKYLFYV--------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
            +  AG    S +L  +        P + P NV G     + L + W  +  +E  +    
Sbjct: 941  FNTAG---TSPFLPAINVTTKKPPPSQPPMNV-GWNLMGSQLSVYWEPVVAMESESDVLG 996

Query: 637  YRIFWRRHNTGE 648
            Y++ ++R    E
Sbjct: 997  YQLSYQRQRHKE 1008



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 154/395 (38%), Gaps = 39/395 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPS----DRISQGNYGKSLIIKHVE-FSDQGSYT 103
           ++  L C   GTP PQ  WS +G  IN       R+S GN    LII  ++ + D G Y 
Sbjct: 107 EEATLTCDAKGTPSPQYRWSLNGTLINLGLDRRRRLSGGN----LIISSLDRYQDVGMYQ 162

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFEC---KASGLPEPEIHW 159
           C   N VG   S    L      +F V     ++  E + V   C    +SG  +    W
Sbjct: 163 CMAYNTVGAILSRRASLQFAYLDHFKVHTRSAVSVREGQGVVLLCGTPTSSG--DLTYAW 220

Query: 160 VHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSL--GYVYKDVYVNVL 215
           + N  P      N RR V      + I  +  SD GNY C   NS+  G V       +L
Sbjct: 221 IFNEYPYFVQQDN-RRFVSQQTGNLYIAKVEPSDVGNYTCVVMNSITKGKVQSSPTSLIL 279

Query: 216 -------AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTI 266
                   + P+I    P +     G TV L C   G P PE+ W   N           
Sbjct: 280 RTDGVMGEYEPKIEVNFPDNVPAAKGSTVTLECFALGNPVPEITWRRANGVPFPSKVKMK 339

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
                L+I      D+G Y C A NK+G    SG L            +D  +   +   
Sbjct: 340 YSNAVLEIPSFQQDDTGGYECVAENKMGKNTVSGRLAFYAKPQWVQTMKDTALAIEERLY 399

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + C A   P  K S  WL+  +     SE R +   D  L+V+  +  D+G Y C A+ +
Sbjct: 400 WECRANGRP--KPSYTWLKNGQ--QLLSEDR-IHVEDGVLSVSALTLSDAGMYQCVAENK 454

Query: 387 LDFIEAQATLTVQVPLEAPSNFT--LIQVIDAKKA 419
              I   A L V   L +P +FT  L++ +   KA
Sbjct: 455 HGVIYFAAELMV---LASPPDFTGNLLRALLKAKA 486



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 113/273 (41%), Gaps = 28/273 (10%)

Query: 135 INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGN 194
           I++ EEE  T  C A G P P+  W  NG  I+      RR  G N I     R  D G 
Sbjct: 102 IDSIEEEA-TLTCDAKGTPSPQYRWSLNGTLINLGLDRRRRLSGGNLIISSLDRYQDVGM 160

Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVN-- 251
           Y C A N++G +         A+        +   +V +G+ VVL C   G P    +  
Sbjct: 161 YQCMAYNTVGAILSRRASLQFAYLDHFKVHTRSAVSVREGQGVVLLC---GTPTSSGDLT 217

Query: 252 --WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKL--GTAQGSGSLT 303
             WI N+     +    R+   +TG+L I  V  +D G YTC   N +  G  Q S +  
Sbjct: 218 YAWIFNEYPYFVQQDNRRFVSQQTGNLYIAKVEPSDVGNYTCVVMNSITKGKVQSSPTSL 277

Query: 304 VKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFES 354
           +     +  +         P++     G + T  C A+ +P  +  I W R +  + F S
Sbjct: 278 ILRTDGVMGEYEPKIEVNFPDNVPAAKGSTVTLECFALGNPVPE--ITWRRANG-VPFPS 334

Query: 355 EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
           + +   SN   L +    + D+G Y C A+ ++
Sbjct: 335 KVKMKYSNAV-LEIPSFQQDDTGGYECVAENKM 366


>gi|296225710|ref|XP_002758613.1| PREDICTED: contactin-6 [Callithrix jacchus]
          Length = 1029

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 180/727 (24%), Positives = 303/727 (41%), Gaps = 100/727 (13%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    + S+      L I + +  D+G Y 
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQ--AILEIPNFQQEDEGFYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C  SN  G   +    L   A P +  + +    +  +++ +ECKA+G P P   W+ NG
Sbjct: 297 CIASNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDSLLWECKANGKPNPWYTWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++   P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 356 ERLN---PEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSK 412

Query: 224 AP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
           +P  K+ +   G  +V+ C+    P+  ++W    + L    R  +LE G LKI +V  +
Sbjct: 413 SPVKKNSFVQVGGDIVIECKPNAFPRAAISWKRGTETLRQSKRIFLLEDGSLKIYNVTRS 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            +G YTC A N+ GTA+ +GSL VKE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 473 HAGSYTCIATNQFGTAKNTGSLIVKERTVITVPPSKMDVTVGESIVLPCQVSHDPSIEVV 532

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            +W    + ID +       R    +   L +       SG+Y C  +T L+ + A A +
Sbjct: 533 FMWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAVADI 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW P  P +     + + +QT T          ++
Sbjct: 593 IVRGPPGPPEDVK-VEDISSTTSQLSWRP-GPDN-NSPIQIFTIQTRTPFSVGWQAVATV 649

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA 512
            E++   G++    V    P  +   RV+A N    G PS+  + +  +     V  +  
Sbjct: 650 PEIL--NGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSALLRTKASVPVVAPVNI 707

Query: 513 IPLGS--SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
              G   S   + W  +  E  NG   GY + ++ V  T                 T  K
Sbjct: 708 NGGGGSRSELVITWESIPEELQNGEGFGYIVMFRPVGLT---------------AWTKEK 752

Query: 569 LAGLE------------PSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS--- 613
           +A +E            P + + + +  Y   G+G+ S        ++   +  RG+   
Sbjct: 753 VASVESSRFVYRNESIIPLSPFEVKVGVYNDEGEGSLSTVTIVYSGEDEPQLAPRGTSVQ 812

Query: 614 --TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
             + + + +SW A+                       AWN       R +  VL      
Sbjct: 813 SFSASEMEVSWNAI-----------------------AWN-------RNTGRVLG----- 837

Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
             YE   V  WT+   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S
Sbjct: 838 --YE---VLYWTDDSKESMIGKIRVS-GNITTKNITGLKANTIYFASVRAYNTAGTGPSS 891

Query: 732 EIISFVT 738
             ++  T
Sbjct: 892 PPVNVTT 898



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 162/660 (24%), Positives = 257/660 (38%), Gaps = 87/660 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGV-----------------GEAKSYSIDLSVLAAPYFTV 130
           +L I  VE SD G+YTC ++N                   G+  SY   + V        
Sbjct: 180 NLYIAKVEPSDVGNYTCFITNKEAQRSVQGPPTPLVQRTDGKIMSYXXKIEVRF------ 233

Query: 131 EPEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ +V  EC A G P P+I W   +G P+   P   +       + I N ++
Sbjct: 234 -PETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPL---PGKVKYSKSQAILEIPNFQQ 289

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A+N  G       + +    PE  +  ++ Y     +++  C+  G P P 
Sbjct: 290 EDEGFYECIASNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDSLLWECKANGKPNPW 348

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L       +E G L IT +  +DSG Y C A NK      +  L V     
Sbjct: 349 YTWLKNGERLNPEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAP 408

Query: 309 HITDQP--EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P  ++  V+ G      C   + P  + +I W RG+E +      R     D SL
Sbjct: 409 DFSKSPVKKNSFVQVGGDIVIECKPNAFP--RAAISWKRGTETL--RQSKRIFLLEDGSL 464

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV------ 420
            +   +   +G YTC A  +    +   +L V+         T+I V  +K  V      
Sbjct: 465 KIYNVTRSHAGSYTCIATNQFGTAKNTGSLIVK-------ERTVITVPPSKMDVTVGESI 517

Query: 421 -----VSWNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKF 470
                VS +P         F G  +         E+ G  S+ +L++   +       K+
Sbjct: 518 VLPCQVSHDPSIEVVFMWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQ--LNHSGKY 575

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
           +   K     L+            ++ +   G PG  + ++   + S+   L W      
Sbjct: 576 LCTVKTTLESLS-----------AVADIIVRGPPGPPEDVKVEDISSTTSQLSWRPGPDN 624

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           N  +  + I  Q+     VG   +  +P I +  T +A + GL P  +Y   +      G
Sbjct: 625 NSPIQIFTI--QTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIG 682

Query: 590 DGAESK--YLFY----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  SK   L      VP   P N+ G G + + LVI+W ++PE   N   F Y + +R 
Sbjct: 683 IGEPSKPSALLRTKASVPVVAPVNINGGGGSRSELVITWESIPEELQNGEGFGYIVMFRP 742

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
                AW ++ V     S  V  N+      P+E+KV       +GEGS+  + IV  GE
Sbjct: 743 VGL-TAWTKEKVASVESSRFVYRNESIIPLSPFEVKV--GVYNDEGEGSLSTVTIVYSGE 799



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 150/640 (23%), Positives = 247/640 (38%), Gaps = 83/640 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +NP +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 339 CKANGKPNPWYTWLKNGERLNPEERIQIEN--GTLIITMLNVSDSGVYQCAAENKY-QII 395

Query: 115 SYSIDLSVLA-APYFTVEP----EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
             + +L VLA AP F+  P     F+    +  +  ECK +  P   I W    + + Q+
Sbjct: 396 YANAELRVLASAPDFSKSPVKKNSFVQVGGD--IVIECKPNAFPRAAISWKRGTETLRQS 453

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
                 + G   + I N+ +S  G+Y C ATN  G   K+    ++     IT  P    
Sbjct: 454 KRIFLLEDG--SLKIYNVTRSHAGSYTCIATNQFGTA-KNTGSLIVKERTVITVPPSKMD 510

Query: 230 TVDGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITD 276
              G+++VL C+V   P  EV   W  N             E  GG       GDL I +
Sbjct: 511 VTVGESIVLPCQVSHDPSIEVVFMWFFNGDVIDLKKGVAHFERIGGE----SVGDLMIRN 566

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT----FRCNAV 332
           +    SG+Y C  +  L +      + V+        PED +VE   S T    +R    
Sbjct: 567 IQLNHSGKYLCTVKTTLESLSAVADIIVRGPP---GPPEDVKVEDISSTTSQLSWRPGPD 623

Query: 333 SDPSLKLSIVWLRGSEPIDFE---SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
           ++  +++  +  R    + ++   + P  +    Y+ TV   S     ++   A   +  
Sbjct: 624 NNSPIQIFTIQTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGI 683

Query: 390 IE-----AQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ--- 441
            E     A       VP+ AP N          + V++W  +  +   G   GY V    
Sbjct: 684 GEPSKPSALLRTKASVPVVAPVNINGGGG-SRSELVITWESIPEELQNGEGFGYIVMFRP 742

Query: 442 ----TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
                WT++          V + ES        +P S    +V  +N    G  S +   
Sbjct: 743 VGLTAWTKEKVASVESSRFVYRNES-------IIPLSPFEVKVGVYNDEGEGSLSTVTIV 795

Query: 498 VTPEGVP------GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKV 549
            + E  P       +VQS  A  +  S   + W    +  G ++GY++ Y     K + +
Sbjct: 796 YSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDSKESMI 852

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKN 604
           G +      +S   TT   + GL+ +T Y   +  Y  AG G  S  +        P + 
Sbjct: 853 GKI-----RVSGNITTK-NITGLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQP 906

Query: 605 PDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           P N+  +  T + L ++W  +  +E+ +    Y+I +R++
Sbjct: 907 PANIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQN 945



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 94/387 (24%), Positives = 137/387 (35%), Gaps = 54/387 (13%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK--HVEFSDQGS 101
           + L   ++ L C   G P P   W ++G  I+ +        G SL I   H +  D G 
Sbjct: 39  LGLSKSEIILNCAANGHPSPHYRWKQNGTDIDFTMSYHYRLEGGSLAISSPHTD-QDIGM 97

Query: 102 YTCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPEI--- 157
           Y C  +N +G   S    L       F T     ++  E + V   C     P P     
Sbjct: 98  YQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCG----PPPHFGDL 153

Query: 158 --HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS----------- 202
              W  N  P+     N RR V      + I  +  SD GNY C  TN            
Sbjct: 154 SYAWTFNDNPLYVQEDN-RRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPPT 212

Query: 203 ----------LGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNW 252
                     + Y  K     +    PE  +A KD       +V L C   G P P+++W
Sbjct: 213 PLVQRTDGKIMSYXXK-----IEVRFPETIQAAKD------SSVKLECFALGNPVPDISW 261

Query: 253 IH-NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT 311
              +   L G          L+I +    D G Y C A N  G     G L         
Sbjct: 262 RRLDGSPLPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPPEWE 321

Query: 312 DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKS 371
            + ++  +    S  + C A   P+   +  WL+  E ++ E     +Q  + +L +T  
Sbjct: 322 QKIQNTYLSIYDSLLWECKANGKPNPWYT--WLKNGERLNPEER---IQIENGTLIITML 376

Query: 372 SELDSGQYTCRAQTELDFIEAQATLTV 398
           +  DSG Y C A+ +   I A A L V
Sbjct: 377 NVSDSGVYQCAAENKYQIIYANAELRV 403



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 102/286 (35%), Gaps = 32/286 (11%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L+ P FT EP    F     +  +   C A+G P P   W  NG  I        R  G
Sbjct: 22  LLSRPIFTQEPHDVIFPLGLSKSEIILNCAANGHPSPHYRWKQNGTDIDFTMSYHYRLEG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            +          D G Y C ATN LG +         A+  +     +   +V +G+ VV
Sbjct: 82  GSLAISSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        W  N   L       R+   ETG+L I  V  +D G YTCF
Sbjct: 142 LLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCF 197

Query: 289 ARNKLG--TAQG---------SGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
             NK    + QG          G +           PE  +     S    C A+ +P  
Sbjct: 198 ITNKEAQRSVQGPPTPLVQRTDGKIMSYXXKIEVRFPETIQAAKDSSVKLECFALGNPVP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            +S   L GS       + ++ +S    L +    + D G Y C A
Sbjct: 258 DISWRRLDGSP---LPGKVKYSKSQAI-LEIPNFQQEDEGFYECIA 299



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 14/190 (7%)

Query: 409 TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
           T +Q   A +  VSWN ++     G   GY+V  WT+   E  I ++ V+ G  TT  + 
Sbjct: 809 TSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVS-GNITTKNIT 867

Query: 469 KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VK 526
                +  FA V A+N A  GP S  ++  T +  P    +  A  L +S   L W  VK
Sbjct: 868 GLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLTNSKLCLNWEHVK 927

Query: 527 PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGY 585
             +    ++GYKI Y+  + +K         +I +   TSA+L  L P    Y I +   
Sbjct: 928 TMENESEVLGYKILYRQNRQSKT--------HILETNNTSAEL--LVPFEEDYLIEIRTV 977

Query: 586 TKAGDGAESK 595
           +  GDG+ S+
Sbjct: 978 SDGGDGSSSE 987


>gi|31980846|ref|NP_059079.2| contactin-6 precursor [Mus musculus]
 gi|55976601|sp|Q9JMB8.2|CNTN6_MOUSE RecName: Full=Contactin-6; AltName: Full=Neural recognition
           molecule NB-3; Short=mNB-3; Flags: Precursor
 gi|26343141|dbj|BAC35227.1| unnamed protein product [Mus musculus]
 gi|49903291|gb|AAH76594.1| Contactin 6 [Mus musculus]
          Length = 1028

 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 178/718 (24%), Positives = 296/718 (41%), Gaps = 82/718 (11%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  ++L C   G P+P   W + DG P+    +I        L I   +  D+G Y 
Sbjct: 239 AAKDSSIKLECFALGNPVPDISWKRLDGSPM--PGKIKYSKSQAILEIPKFQQEDEGFYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G   +    L   A P +  + +    +  +++ +ECKASG P P   W+ NG
Sbjct: 297 CIAGNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDSLFWECKASGNPNPSYTWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++      R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 356 QRLNT---EERIQIENGTLIITMLNISDSGIYQCAAENKYQTIYANAELRVLASAPDFSK 412

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
            P  + +V   G  + + C+    PK  ++W    + L    R   LE G LKI +V  A
Sbjct: 413 NPIKKISVVQVGGDISIECKPNAFPKASISWKRGTENLKQSKRVLFLEDGSLKICNVTRA 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G  + SG L VKE T IT  P   +V  G+S    C    DP++++ 
Sbjct: 473 DAGSYTCVATNQFGNGKSSGGLVVKERTIITVPPSKMDVTVGESIVLPCQVSHDPTMEVL 532

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            VW    + ID +       R    +   L +       SG+Y C  QT L+ + A A +
Sbjct: 533 FVWYFNGDIIDLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADI 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW P  P +     + + +QT T          ++
Sbjct: 593 IVRGPPGPPEDVK-VEHISSTTSQLSWRP-GPDN-NSPIQIFTIQTRTPFSVGWQAVATV 649

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-----TPEGVPGTV 507
            E++   G++    V    P  +   RV+A N    G PS+    +      P   PG +
Sbjct: 650 PEIL--NGQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASVPNVAPGNI 707

Query: 508 QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565
                     S   + W  +  E  NG   GY + ++ V  T    + ER+  + + +  
Sbjct: 708 NGGGG---SRSELVITWEAIPEELQNGEGFGYIVMFRPVGTTAW--MKERVALV-ESSKF 761

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGST-----PNNLVI 620
             +   + P + + + +  Y   G+G+ S        ++   +  RG++      + + +
Sbjct: 762 IYRNESIMPLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEV 821

Query: 621 SWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQ 680
           SW A+                       AWN       R +  VL        YE   V 
Sbjct: 822 SWNAI-----------------------AWN-------RNTGRVLG-------YE---VL 841

Query: 681 TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
            WT+   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S  ++  T
Sbjct: 842 YWTDNSKESMIGKIRVS-GNVTTKNITGLRANTIYFASVRAYNTAGTGPSSLPVNVTT 898



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 161/653 (24%), Positives = 257/653 (39%), Gaps = 73/653 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           +L    VE SD G+YTC V+N             ++           P   V  PE I A
Sbjct: 180 NLYFAKVEPSDVGNYTCFVTNKEAHRSVQGPPTPLVLRTDGVMGEYEPKIEVRFPETIQA 239

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A++ ++  EC A G P P+I W   +G P+   P   +       + I   ++ D G Y 
Sbjct: 240 AKDSSIKLECFALGNPVPDISWKRLDGSPM---PGKIKYSKSQAILEIPKFQQEDEGFYE 296

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A N  G       + +    PE  +  ++ Y     ++   C+  G P P   W+ N 
Sbjct: 297 CIAGNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDSLFWECKASGNPNPSYTWLKNG 355

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQP- 314
           + L       +E G L IT +  +DSG Y C A NK  T   +  L V       +  P 
Sbjct: 356 QRLNTEERIQIENGTLIITMLNISDSGIYQCAAENKYQTIYANAELRVLASAPDFSKNPI 415

Query: 315 -EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
            +   V+ G   +  C   + P  K SI W RG+E  + +   R +   D SL +   + 
Sbjct: 416 KKISVVQVGGDISIECKPNAFP--KASISWKRGTE--NLKQSKRVLFLEDGSLKICNVTR 471

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV-----------VS 422
            D+G YTC A  +    ++   L V+         T+I V  +K  V           VS
Sbjct: 472 ADAGSYTCVATNQFGNGKSSGGLVVK-------ERTIITVPPSKMDVTVGESIVLPCQVS 524

Query: 423 WNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 477
            +P        +F G  +         E+ G  S+ +L++   +       K++   +  
Sbjct: 525 HDPTMEVLFVWYFNGDIIDLKKGVAHFERIGGESVGDLMIRNIQ--LGHSGKYLCTVQTT 582

Query: 478 ARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
              L+            ++ +   G PG  + ++   + S+   L W      N  +  +
Sbjct: 583 LERLS-----------AVADIIVRGPPGPPEDVKVEHISSTTSQLSWRPGPDNNSPIQIF 631

Query: 538 KIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK- 595
            I  Q+     VG   +  +P I +  T +A + GL P  +Y   +      G G  SK 
Sbjct: 632 TI--QTRTPFSVGWQAVATVPEILNGQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKP 689

Query: 596 -----YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
                    VP   P N+ G G + + LVI+W A+PE   N   F Y + +R   T  AW
Sbjct: 690 SELLRTKASVPNVAPGNINGGGGSRSELVITWEAIPEELQNGEGFGYIVMFRPVGT-TAW 748

Query: 651 NQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
            ++ V     S+ +  N+      P+E+KV       +GEGS+  + IV  GE
Sbjct: 749 MKERVALVESSKFIYRNESIMPLSPFEVKV--GVYNNEGEGSLSTVTIVYSGE 799



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 146/631 (23%), Positives = 243/631 (38%), Gaps = 65/631 (10%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +N  +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 339 CKASGNPNPSYTWLKNGQRLNTEERIQIEN--GTLIITMLNISDSGIYQCAAENKY-QTI 395

Query: 115 SYSIDLSVLA-APYFTVEP-EFINAAE-EETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
             + +L VLA AP F+  P + I+  +    ++ ECK +  P+  I W    + + Q+  
Sbjct: 396 YANAELRVLASAPDFSKNPIKKISVVQVGGDISIECKPNAFPKASISWKRGTENLKQSKR 455

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
               + G  +I   N+ ++D G+Y C ATN  G   K     V+     IT  P      
Sbjct: 456 VLFLEDGSLKIC--NVTRADAGSYTCVATNQFGN-GKSSGGLVVKERTIITVPPSKMDVT 512

Query: 232 DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
            G+++VL C+V   P  EV   W  N             E  GG       GDL I ++ 
Sbjct: 513 VGESIVLPCQVSHDPTMEVLFVWYFNGDIIDLKKGVAHFERIGGE----SVGDLMIRNIQ 568

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT----FRCNAVSD 334
              SG+Y C  +  L        + V+        PED +VE   S T    +R    ++
Sbjct: 569 LGHSGKYLCTVQTTLERLSAVADIIVRGPP---GPPEDVKVEHISSTTSQLSWRPGPDNN 625

Query: 335 PSLKLSIVWLRGSEPIDFESE---PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
             +++  +  R    + +++    P  +    Y+ TV   S     ++   A   +   E
Sbjct: 626 SPIQIFTIQTRTPFSVGWQAVATVPEILNGQTYNATVVGLSPWVEYEFRVVAGNNIGIGE 685

Query: 392 AQA-----TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
                        VP  AP N          + V++W  +  +   G   GY V      
Sbjct: 686 PSKPSELLRTKASVPNVAPGNINGGGG-SRSELVITWEAIPEELQNGEGFGYIVMFRPVG 744

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVP-- 504
                   + + +        +  +P S    +V  +N    G  S +    + E  P  
Sbjct: 745 TTAWMKERVALVESSKFIYRNESIMPLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQL 804

Query: 505 ---GT-VQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKVGPLLERLPY 558
              GT VQS  A  +  S   + W    +  G ++GY++ Y   + K + +G +      
Sbjct: 805 APRGTSVQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDNSKESMIGKI-----R 856

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGS 613
           +S   TT   + GL  +T Y   +  Y  AG G  S  +        P + P N+  + S
Sbjct: 857 VSGNVTTK-NITGLRANTIYFASVRAYNTAGTGPSSLPVNVTTKKSPPSQPPANIAWKLS 915

Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
             + L ++W  +  +E+ +    Y+I +R++
Sbjct: 916 N-SKLCLNWEHVKTMENESEVLGYKILYRQN 945



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 90/378 (23%), Positives = 135/378 (35%), Gaps = 40/378 (10%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS-DQGSYTC 104
           L   ++ L C   G P P   W ++G  I+          G SL I       D G Y C
Sbjct: 41  LSRSEIILTCTANGYPSPHYRWKQNGTDIDFGMTYHYRLDGGSLAISSPRTDQDIGIYQC 100

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHW 159
             +N VG   S    L       F T     ++  E + V   C   G P    E    W
Sbjct: 101 LATNPVGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLC---GPPPHFGELSYAW 157

Query: 160 VHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGY------------ 205
             N  P+     + RR V  +   +    +  SD GNY C  TN   +            
Sbjct: 158 TFNDSPL-YVQEDKRRFVSQDTGNLYFAKVEPSDVGNYTCFVTNKEAHRSVQGPPTPLVL 216

Query: 206 ----VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG 261
               V  +    +    PE  +A KD       ++ L C   G P P+++W         
Sbjct: 217 RTDGVMGEYEPKIEVRFPETIQAAKD------SSIKLECFALGNPVPDISWKRLDGSPMP 270

Query: 262 GRYTILET-GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
           G+    ++   L+I      D G Y C A N  G     G L          + ++  + 
Sbjct: 271 GKIKYSKSQAILEIPKFQQEDEGFYECIAGNLRGRNLAKGQLIFYAPPEWEQKIQNTYLS 330

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
              S  + C A  +P+   S  WL+  + ++ E     +Q  + +L +T  +  DSG Y 
Sbjct: 331 IYDSLFWECKASGNPN--PSYTWLKNGQRLNTEER---IQIENGTLIITMLNISDSGIYQ 385

Query: 381 CRAQTELDFIEAQATLTV 398
           C A+ +   I A A L V
Sbjct: 386 CAAENKYQTIYANAELRV 403



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 14/190 (7%)

Query: 409 TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
           T +Q   A +  VSWN ++     G   GY+V  WT+   E  I ++ V+ G  TT  + 
Sbjct: 809 TSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDNSKESMIGKIRVS-GNVTTKNIT 867

Query: 469 KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VK 526
                +  FA V A+N A  GP S  ++  T +  P    +  A  L +S   L W  VK
Sbjct: 868 GLRANTIYFASVRAYNTAGTGPSSLPVNVTTKKSPPSQPPANIAWKLSNSKLCLNWEHVK 927

Query: 527 PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGY 585
             +    ++GYKI Y+  + +K         +I +   TSA+L  L P    Y I +   
Sbjct: 928 TMENESEVLGYKILYRQNRQSKT--------HILETNNTSAEL--LVPFEEDYLIEIRTV 977

Query: 586 TKAGDGAESK 595
           +  GDG+ S+
Sbjct: 978 SDGGDGSSSE 987



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 101/285 (35%), Gaps = 32/285 (11%)

Query: 123 LAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGP 179
            + P F  EP+   F        +   C A+G P P   W  NG  I        R  G 
Sbjct: 23  FSRPIFIQEPQDVIFPLDLSRSEIILTCTANGYPSPHYRWKQNGTDIDFGMTYHYRLDGG 82

Query: 180 NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVL 238
           +          D G Y C ATN +G +         A+  +     +   +V +G+ VVL
Sbjct: 83  SLAISSPRTDQDIGIYQCLATNPVGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVL 142

Query: 239 TCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCFA 289
            C     P P        W  N   L       R+   +TG+L    V  +D G YTCF 
Sbjct: 143 LC----GPPPHFGELSYAWTFNDSPLYVQEDKRRFVSQDTGNLYFAKVEPSDVGNYTCFV 198

Query: 290 RNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSLK 338
            NK    + QG  +  V     +  +         PE  +     S    C A+ +P   
Sbjct: 199 TNKEAHRSVQGPPTPLVLRTDGVMGEYEPKIEVRFPETIQAAKDSSIKLECFALGNPVPD 258

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +S   L GS       + ++ +S    L + K  + D G Y C A
Sbjct: 259 ISWKRLDGS---PMPGKIKYSKSQAI-LEIPKFQQEDEGFYECIA 299


>gi|291402553|ref|XP_002717495.1| PREDICTED: contactin 2 [Oryctolagus cuniculus]
          Length = 1040

 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 173/658 (26%), Positives = 278/658 (42%), Gaps = 44/658 (6%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 251 ALAGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWATAE----PTLQIPSVSFEDEGTYEC 306

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           E  N  G   +    + V A P +        A     + + C A+G P P + W+ NG+
Sbjct: 307 EAENSKGR-DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGE 365

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           P++      R +V    +    L   D+G Y C A N  G +Y    + V A AP+    
Sbjct: 366 PLAS---QNRVEVSAGDLRFSRLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLN 422

Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           P         G  V + C+   APK  V W    + L    R T+   G L I +++ +D
Sbjct: 423 PVRRLIPAARGGEVTIPCQPRAAPKAVVLWSKGTEILANSSRVTVTPDGTLIIRNISRSD 482

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP++ L+ 
Sbjct: 483 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTF 542

Query: 342 VWLRGSEPIDFE---SEPRFVQSNDY--SLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
           +W     PIDF+      R   + +    LT+  +     G+YTC AQT +D    +AT+
Sbjct: 543 IWTLDDFPIDFDKPGGHYRRASAKETVGDLTILNAQLRHGGKYTCMAQTVVDSASKEATV 602

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GSIR 453
            V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G+   +R
Sbjct: 603 LVRGPPGPPGGVVVRDIGDT-SVQLSWS----RGFDNHSPIAKYTLQARTPPAGKWKQVR 657

Query: 454 ELIVN-KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLE 511
               N +G + T +V    P      RVLA N    G PS   S + T E  P    S  
Sbjct: 658 TNPANIEGNAETAQVLGLTPWMDYEFRVLASNILGTGKPSGPSSRIRTKEAAPSVAPSGL 717

Query: 512 AIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYIS--DPTTTS 566
           +   G+     + W  +  E  NG   GY + ++     + G    +   +S  D     
Sbjct: 718 SGGGGAPGELVVNWTPMSREYQNGDGFGYLLSFR-----RQGSASWQTAQVSGADAQYFV 772

Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGSTPNNLVIS 621
                ++P T + + +  Y + GDG ES   L Y     P   P  +  +G + + + ++
Sbjct: 773 YSNESIQPYTPFEVKIRSYNRRGDGPESLTALVYSAEEEPKVVPTKIWAKGVSSSEMNVT 832

Query: 622 WTAMPEIEHNAPHFKYRI-FWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
           W  + + + N     Y I +WR  +   A ++        S LV    P  + Y + V
Sbjct: 833 WEPVQQ-DVNGILLGYEIRYWRVGDKEAAADRVRTAGLDTSALVTGLHPNTK-YHVTV 888



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 147/375 (39%), Gaps = 38/375 (10%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           ++V L C    +P     W  +G  + + P  R  Q   G  +I+   +  D G Y C  
Sbjct: 55  EQVMLACRARASPPATYRWKMNGTEMKLAPGSR-HQLMGGNLVIMNPTKAQDAGVYQCLA 113

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIH------- 158
           SN VG   S    L       F    EF     +   T       LP  P  H       
Sbjct: 114 SNPVGTVVSREAVLR------FGFLQEFSKEERDPVKTHAGWGVMLPCNPPAHYPGLSYR 167

Query: 159 WVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY----- 211
           W+ N  P +  P + R  V      + I     SD GNY C AT+ + +  K V+     
Sbjct: 168 WLLNEFP-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQ 226

Query: 212 VNVLAHAPEI------TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           +N+ A  P +         P + Y + G+ V L C  FG P P + W      L+    T
Sbjct: 227 LNLAAEDPRLFAPSIKARFPAETYALAGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWAT 286

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
              T  L+I  V+F D G Y C A N  G     G + V+          D E + G + 
Sbjct: 287 AEPT--LQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNL 344

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P  + ++ WLR  EP+  ++    V+ +   L  ++ S  DSG Y C A+ 
Sbjct: 345 RWGCAAAGKP--RPTVRWLRNGEPLASQNR---VEVSAGDLRFSRLSLEDSGMYQCVAEN 399

Query: 386 ELDFIEAQATLTVQV 400
           +   I A A L VQ 
Sbjct: 400 KHGTIYASAELAVQA 414



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 150/617 (24%), Positives = 236/617 (38%), Gaps = 90/617 (14%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRI--SQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
           C   G P P   W ++G P+   +R+  S G+    L    +   D G Y C   N  G 
Sbjct: 348 CAAAGKPRPTVRWLRNGEPLASQNRVEVSAGD----LRFSRLSLEDSGMYQCVAENKHGT 403

Query: 113 AKSYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
             + S +L+V A AP F + P    I AA    VT  C+    P+  + W    + ++ +
Sbjct: 404 IYA-SAELAVQALAPDFRLNPVRRLIPAARGGEVTIPCQPRAAPKAVVLWSKGTEILANS 462

Query: 170 PPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
               R  V P+  + I N+ +SD G Y C A N +G       ++V   A +IT AP   
Sbjct: 463 S---RVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSA 518

Query: 229 YTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVA 278
               G  + L C     P  ++ +I    +        GG Y   +  ET GDL I +  
Sbjct: 519 DINLGDNLTLQCHASHDPTMDLTFIWTLDDFPIDFDKPGGHYRRASAKETVGDLTILNAQ 578

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE-----DYEVEAGQS--------- 324
               G+YTC A+  + +A    ++ V+               D  V+   S         
Sbjct: 579 LRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRDIGDTSVQLSWSRGFDNHSPI 638

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQ 378
           A +   A + P+ K   V    + P + E      Q        DY   V  S+ L +G+
Sbjct: 639 AKYTLQARTPPAGKWKQV---RTNPANIEGNAETAQVLGLTPWMDYEFRVLASNILGTGK 695

Query: 379 YTCRAQTELDFIEAQATLTVQVPLEAPS---NFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
                        +  +  ++    APS   +          + VV+W P+S +   G  
Sbjct: 696 ------------PSGPSSRIRTKEAAPSVAPSGLSGGGGAPGELVVNWTPMSREYQNGDG 743

Query: 436 RGYKVQ-------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
            GY +        +W      G+  +  V   ES    +  + P      ++ ++N   +
Sbjct: 744 FGYLLSFRRQGSASWQTAQVSGADAQYFVYSNES----IQPYTPFE---VKIRSYNRRGD 796

Query: 489 GPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKG 546
           GP S      + E  P  V + + A  + SS   + W   +Q  NG+L+GY+I+Y  V  
Sbjct: 797 GPESLTALVYSAEEEPKVVPTKIWAKGVSSSEMNVTWEPVQQDVNGILLGYEIRYWRVGD 856

Query: 547 TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPD 606
            +      R   +     TSA + GL P+TKY + +  Y +AG G  S        K P 
Sbjct: 857 KEAAADRVRTAGLD----TSALVTGLHPNTKYHVTVRAYNRAGTGPASPSANATTMKPPP 912

Query: 607 NVEGRGSTPNNLVISWT 623
                   P N  ISWT
Sbjct: 913 Q-----RPPGN--ISWT 922



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 147/661 (22%), Positives = 232/661 (35%), Gaps = 89/661 (13%)

Query: 88  SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
           +L I     SD G+Y+C      + S     +K   ++L+     L AP      P    
Sbjct: 191 NLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPAETY 250

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + VT EC A G P P I W      +S     P+       + I ++   D G Y 
Sbjct: 251 ALAGQQVTLECFAFGNPVPRIKWRKVDGSLS-----PQWATAEPTLQIPSVSFEDEGTYE 305

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V A  PE  +   D     G  +   C   G P+P V W+ N 
Sbjct: 306 CEAENSKGRDTVQGRIIVQAQ-PEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNG 364

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
           + L       +  GDL+ + ++  DSG Y C A NK GT   S  L V+         P 
Sbjct: 365 EPLASQNRVEVSAGDLRFSRLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPV 424

Query: 316 DYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
              + A  G   T  C   + P  K  ++W +G+E +   S  R   + D +L +   S 
Sbjct: 425 RRLIPAARGGEVTIPCQPRAAP--KAVVLWSKGTEILANSS--RVTVTPDGTLIIRNISR 480

Query: 374 LD-----------------SGQYTCRAQTELDFIEAQA--------TLTVQVPLEAPSNF 408
            D                 +G  + R  T++    + A        TL      +   + 
Sbjct: 481 SDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDL 540

Query: 409 TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
           T I  +D         P+      GH+R    +   E  G+ +I    +  G   T    
Sbjct: 541 TFIWTLDDF-------PIDFDKPGGHYRRASAK---ETVGDLTILNAQLRHGGKYTCMAQ 590

Query: 469 KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPE 528
             V ++   A VL                            +    +G ++  L W +  
Sbjct: 591 TVVDSASKEATVLVRGPPG------------------PPGGVVVRDIGDTSVQLSWSRGF 632

Query: 529 QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
             +  +  Y ++ ++    K   +    P   +    +A++ GL P   Y   +      
Sbjct: 633 DNHSPIAKYTLQARTPPAGKWKQVRTN-PANIEGNAETAQVLGLTPWMDYEFRVLASNIL 691

Query: 589 GDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           G G  S      +     P   P  + G G  P  LV++WT M     N   F Y + +R
Sbjct: 692 GTGKPSGPSSRIRTKEAAPSVAPSGLSGGGGAPGELVVNWTPMSREYQNGDGFGYLLSFR 751

Query: 643 RHNTGEAWNQDDVLDWRQSELVLAN---QPTFQPYEIKVVQTWTEKDGEGSIRELIVNKG 699
           R  +  +W    V        V +N   QP + P+E+K+       DG  S+  L+ +  
Sbjct: 752 RQGSA-SWQTAQVSGADAQYFVYSNESIQP-YTPFEVKIRSYNRRGDGPESLTALVYSAE 809

Query: 700 E 700
           E
Sbjct: 810 E 810



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 115/297 (38%), Gaps = 30/297 (10%)

Query: 126 PYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
           P F  +P    F   + EE V   C+A   P     W  NG  +  AP +  + +G N +
Sbjct: 37  PVFEEQPLGLLFPEESTEEQVMLACRARASPPATYRWKMNGTEMKLAPGSRHQLMGGNLV 96

Query: 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTCR 241
            +   +  D G Y C A+N +G V     V       E ++  +D   T  G  V+L C 
Sbjct: 97  IMNPTKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVKTHAGWGVMLPCN 156

Query: 242 VFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGTA 296
                P     W+ N+      T GR+ + + TG+L I     +D G Y+C A + +  +
Sbjct: 157 PPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFS 216

Query: 297 QGSGSLTVKEHTHITDQP-------------EDYEVEAGQSATFRCNAVSDPSLKLSIVW 343
             S      +     + P             E Y + AGQ  T  C A  +P  +  I W
Sbjct: 217 TKSVFSKFAQLNLAAEDPRLFAPSIKARFPAETYAL-AGQQVTLECFAFGNPVPR--IKW 273

Query: 344 LRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
            +    +D    P++  + + +L +   S  D G Y C A+        Q  + VQ 
Sbjct: 274 RK----VDGSLSPQWATA-EPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQA 325


>gi|6981246|ref|NP_037357.1| contactin-6 precursor [Rattus norvegicus]
 gi|55976162|sp|P97528.1|CNTN6_RAT RecName: Full=Contactin-6; AltName: Full=Neural recognition
           molecule NB-3; Flags: Precursor
 gi|1752645|dbj|BAA13320.1| NB-3 [Rattus norvegicus]
          Length = 1028

 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 182/720 (25%), Positives = 300/720 (41%), Gaps = 86/720 (11%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    ++   N   +L I   +  D+G Y 
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGSPM--PGKVKYSNSQATLEIPKFQQEDEGFYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G   +    L   A P +  + +    +  +++ +ECKASG P P   W+ NG
Sbjct: 297 CVAGNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDSLFWECKASGNPNPSYTWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++      R +     + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 356 ERLNT---EERIQTENGTLIITMLNVSDSGIYQCAAENKYQTIYANAELRVLASAPDFSK 412

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
            P  + +V   G  + + C+    PK  ++W    + L    R   LE G LKI +V  +
Sbjct: 413 NPIKKISVVQVGGDISIECKPNAFPKASISWKRGTENLKQSKRVFFLEDGSLKICNVTRS 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G  + SGSL VKE T IT  P   +V  G+S    C    DP++++ 
Sbjct: 473 DAGSYTCVATNQFGNGKSSGSLIVKERTVITVPPSKMDVTVGESIVLPCQVSHDPTMEVL 532

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            VW    + ID +       R    +   L +       SG+Y C  QT L+ + A A +
Sbjct: 533 FVWYFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADI 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW P  P +     + + +QT T          ++
Sbjct: 593 IVRGPPGPPEDVK-VEHISSTTSQLSWRP-GPDN-NSPIQIFTIQTRTPFSVGWQAVATV 649

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQ-SL 510
            E++   G++    V    P  +   RV+A N    G PS+    + T   +P     ++
Sbjct: 650 PEIL--NGQTYNATVIGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASIPNVAPVNI 707

Query: 511 EAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT-----KVGPLLERLPYISDPT 563
                  S   + W  +  E  NG   GY I ++ V  T     KV  L+E   +I    
Sbjct: 708 NGGGGSRSELVITWEPIPEELQNGEGFGYIIMFRPVGSTTWMKEKVA-LVESSKFI---- 762

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGST-----PNNL 618
               +   + P + + + +  Y   G+G+ S        ++   +  RG++      +++
Sbjct: 763 ---YRNESIMPLSPFEVKVGVYNNEGEGSLSTVSIVYSGEDEPRLAPRGTSVQSFSASDM 819

Query: 619 VISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            +SW A+                       AWN       R +  VL        YE   
Sbjct: 820 EVSWNAI-----------------------AWN-------RNTGRVLG-------YE--- 839

Query: 679 VQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           V  WT+   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S  ++  T
Sbjct: 840 VLYWTDNSKESMIGKIRVS-GNVTTKNITGLRANTIYFASVRAYNTAGTGPSSPPVNVTT 898



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 164/660 (24%), Positives = 258/660 (39%), Gaps = 87/660 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC V+N   EA       SV   P   V+                
Sbjct: 180 NLYIAKVEPSDVGNYTCFVTNK--EAHR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 232

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ +V  EC A G P P+I W   +G P+   P   +       + I   ++
Sbjct: 233 FPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPM---PGKVKYSNSQATLEIPKFQQ 289

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A N  G       + +    PE  +  ++ Y     ++   C+  G P P 
Sbjct: 290 EDEGFYECVAGNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDSLFWECKASGNPNPS 348

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L        E G L IT +  +DSG Y C A NK  T   +  L V     
Sbjct: 349 YTWLKNGERLNTEERIQTENGTLIITMLNVSDSGIYQCAAENKYQTIYANAELRVLASAP 408

Query: 309 HITDQP--EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P  +   V+ G   +  C   + P  K SI W RG+E  + +   R     D SL
Sbjct: 409 DFSKNPIKKISVVQVGGDISIECKPNAFP--KASISWKRGTE--NLKQSKRVFFLEDGSL 464

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV------ 420
            +   +  D+G YTC A  +    ++  +L V+         T+I V  +K  V      
Sbjct: 465 KICNVTRSDAGSYTCVATNQFGNGKSSGSLIVK-------ERTVITVPPSKMDVTVGESI 517

Query: 421 -----VSWNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKF 470
                VS +P        +F G  +         E+ G  S+ +L++   +       K+
Sbjct: 518 VLPCQVSHDPTMEVLFVWYFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQ--LGHSGKY 575

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
           +   +     L+            ++ +   G PG  + ++   + S+   L W      
Sbjct: 576 LCTVQTTLERLS-----------AVADIIVRGPPGPPEDVKVEHISSTTSQLSWRPGPDN 624

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           N  +  + I  Q+     VG   +  +P I +  T +A + GL P  +Y   +      G
Sbjct: 625 NSPIQIFTI--QTRTPFSVGWQAVATVPEILNGQTYNATVIGLSPWVEYEFRVVAGNNIG 682

Query: 590 DGAESK------YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  SK          +P   P N+ G G + + LVI+W  +PE   N   F Y I +R 
Sbjct: 683 IGEPSKPSELLRTKASIPNVAPVNINGGGGSRSELVITWEPIPEELQNGEGFGYIIMFRP 742

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
             +   W ++ V     S+ +  N+      P+E+KV       +GEGS+  + IV  GE
Sbjct: 743 VGS-TTWMKEKVALVESSKFIYRNESIMPLSPFEVKV--GVYNNEGEGSLSTVSIVYSGE 799



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 147/638 (23%), Positives = 247/638 (38%), Gaps = 79/638 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +N  +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 339 CKASGNPNPSYTWLKNGERLNTEERIQTEN--GTLIITMLNVSDSGIYQCAAENKY-QTI 395

Query: 115 SYSIDLSVLA-APYFTVEP-EFINAAE-EETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
             + +L VLA AP F+  P + I+  +    ++ ECK +  P+  I W    + + Q+  
Sbjct: 396 YANAELRVLASAPDFSKNPIKKISVVQVGGDISIECKPNAFPKASISWKRGTENLKQSKR 455

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
               + G  +I   N+ +SD G+Y C ATN  G   K     ++     IT  P      
Sbjct: 456 VFFLEDGSLKIC--NVTRSDAGSYTCVATNQFGN-GKSSGSLIVKERTVITVPPSKMDVT 512

Query: 232 DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
            G+++VL C+V   P  EV   W  N             E  GG       GDL I ++ 
Sbjct: 513 VGESIVLPCQVSHDPTMEVLFVWYFNGDVIDLKKGVAHFERIGGE----SVGDLMIRNIQ 568

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT----FRCNAVSD 334
              SG+Y C  +  L        + V+        PED +VE   S T    +R    ++
Sbjct: 569 LGHSGKYLCTVQTTLERLSAVADIIVRGPP---GPPEDVKVEHISSTTSQLSWRPGPDNN 625

Query: 335 PSLKLSIVWLRGSEPIDFE---SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
             +++  +  R    + ++   + P  +    Y+ TV   S     ++   A   +   E
Sbjct: 626 SPIQIFTIQTRTPFSVGWQAVATVPEILNGQTYNATVIGLSPWVEYEFRVVAGNNIGIGE 685

Query: 392 AQA-----TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ----- 441
                        +P  AP N          + V++W P+  +   G   GY +      
Sbjct: 686 PSKPSELLRTKASIPNVAPVNINGGGG-SRSELVITWEPIPEELQNGEGFGYIIMFRPVG 744

Query: 442 --TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
             TW ++          + + ES        +P S    +V  +N    G  S +    +
Sbjct: 745 STTWMKEKVALVESSKFIYRNES-------IMPLSPFEVKVGVYNNEGEGSLSTVSIVYS 797

Query: 500 PEGVP------GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKVGP 551
            E  P       +VQS  A  +  S   + W    +  G ++GY++ Y   + K + +G 
Sbjct: 798 GEDEPRLAPRGTSVQSFSASDMEVSWNAIAW---NRNTGRVLGYEVLYWTDNSKESMIGK 854

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPD 606
           +      +S   TT   + GL  +T Y   +  Y  AG G  S  +        P + P 
Sbjct: 855 I-----RVSGNVTTK-NITGLRANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPA 908

Query: 607 NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           N+  + S  + L ++W  +  +E+ +    Y+I +R++
Sbjct: 909 NIAWKLSN-SKLCLNWEHVKTMENESEVLGYKILYRQN 945



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 137/378 (36%), Gaps = 40/378 (10%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS-DQGSYTC 104
           L   ++ L C   G P P   W ++G  I+ S        G SL I       D G Y C
Sbjct: 41  LSRSEIILSCTASGYPSPHYRWKQNGTDIDFSMTYHYRLDGGSLAISSPRTDQDIGIYQC 100

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHW 159
             +N VG   S    L       F T     ++  E + V   C   G P    E    W
Sbjct: 101 LATNPVGTILSRKAKLQFAYIEDFETKSRSTVSVREGQGVVLLC---GPPPHFGELSYDW 157

Query: 160 VHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGY------------ 205
             N  P+     + RR V  N   + I  +  SD GNY C  TN   +            
Sbjct: 158 TFNDNPL-YVQEDKRRFVSQNTGNLYIAKVEPSDVGNYTCFVTNKEAHRSVQGPPTPLVQ 216

Query: 206 ----VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG 261
               V  +    +    PE  +A KD       +V L C   G P P+++W         
Sbjct: 217 RTDGVMGEYEPKIEVRFPETIQAAKD------SSVKLECFALGNPVPDISWRRLDGSPMP 270

Query: 262 GRYTILET-GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
           G+     +   L+I      D G Y C A N  G     G L          + ++  + 
Sbjct: 271 GKVKYSNSQATLEIPKFQQEDEGFYECVAGNLRGRNLAKGQLIFYAPPEWEQKIQNTYLS 330

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
              S  + C A  +P+   S  WL+  E ++ E     +Q+ + +L +T  +  DSG Y 
Sbjct: 331 IYDSLFWECKASGNPN--PSYTWLKNGERLNTEER---IQTENGTLIITMLNVSDSGIYQ 385

Query: 381 CRAQTELDFIEAQATLTV 398
           C A+ +   I A A L V
Sbjct: 386 CAAENKYQTIYANAELRV 403



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 106/289 (36%), Gaps = 36/289 (12%)

Query: 121 SVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
           S    P F  EP+   F        +   C ASG P P   W  NG  I  +     R  
Sbjct: 21  SRFTRPIFIQEPQDVIFPLDLSRSEIILSCTASGYPSPHYRWKQNGTDIDFSMTYHYRLD 80

Query: 178 GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTV 236
           G +          D G Y C ATN +G +         A+  +     +   +V +G+ V
Sbjct: 81  GGSLAISSPRTDQDIGIYQCLATNPVGTILSRKAKLQFAYIEDFETKSRSTVSVREGQGV 140

Query: 237 VLTCRVFGAPKPEV-----NWIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTC 287
           VL C     P P       +W  N   L       R+    TG+L I  V  +D G YTC
Sbjct: 141 VLLC----GPPPHFGELSYDWTFNDNPLYVQEDKRRFVSQNTGNLYIAKVEPSDVGNYTC 196

Query: 288 FARNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPS 336
           F  NK    + QG  +  V+    +  +         PE  +     S    C A+ +P 
Sbjct: 197 FVTNKEAHRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPV 256

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQ--SNDYSLTVTKSSELDSGQYTCRA 383
             +S  W R    +D    P  V+  ++  +L + K  + D G Y C A
Sbjct: 257 PDIS--WRR----LDGSPMPGKVKYSNSQATLEIPKFQQEDEGFYECVA 299



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 14/190 (7%)

Query: 409 TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
           T +Q   A    VSWN ++     G   GY+V  WT+   E  I ++ V+ G  TT  + 
Sbjct: 809 TSVQSFSASDMEVSWNAIAWNRNTGRVLGYEVLYWTDNSKESMIGKIRVS-GNVTTKNIT 867

Query: 469 KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VK 526
                +  FA V A+N A  GP S  ++  T +  P    +  A  L +S   L W  VK
Sbjct: 868 GLRANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLSNSKLCLNWEHVK 927

Query: 527 PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGY 585
             +    ++GYKI Y+  + +K         ++ +   TSA+L  L P    Y I +   
Sbjct: 928 TMENESEVLGYKILYRQNRQSKT--------HVLETNNTSAEL--LVPFEEDYLIEIRTV 977

Query: 586 TKAGDGAESK 595
           +  GDG+ S+
Sbjct: 978 SDGGDGSSSE 987


>gi|351695049|gb|EHA97967.1| Contactin-3 [Heterocephalus glaber]
          Length = 1021

 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 166/625 (26%), Positives = 268/625 (42%), Gaps = 48/625 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P     +I    +   L I   +  D GSY 
Sbjct: 232 AAKGATVKLECFALGNPVPQINWRRSDGMPF--PAKIKLRKFNGVLEIPAFQQEDAGSYE 289

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A P++    + +  A E+++ +E +ASG P+P   W+ NG
Sbjct: 290 CIAENSRGKNVARG-RLTYYAKPHWVQFIKDMEMAVEDSIYWEFQASGKPKPSYRWLKNG 348

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + +       R ++    +TI NL  +D+G + C A N  G +Y    + V+A AP+ ++
Sbjct: 349 EALVL---EERIQIENGALTISNLNVTDSGMFQCIAENKHGLIYSSAELKVVASAPDFSK 405

Query: 224 AP-KDEYTVD-GKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILETGDLKITDVAFA 280
            P K+   V  G  V L C+   +P+   +W   N       R + L+ G LKI +V  A
Sbjct: 406 NPMKNLVQVQVGSLVNLDCKPRASPRALSSWKKGNTVVQEHERISFLKDGGLKIANVTKA 465

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           DSG YTC A N+ G A G+  L V E T IT  P + +V  G+S    C    DP L + 
Sbjct: 466 DSGTYTCTAENQFGKANGTTLLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDIM 525

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 526 FTWYFNGALTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTRVDSVSSAAEL 585

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
            V+     P N  + ++ D   A +SW       +PV+  +++       G++  T    
Sbjct: 586 IVRGSPGPPENVKIDEITDT-TAQLSWKEGTDNHSPVTSYAIQARTPFSVGWQTVT---- 640

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
               ++ E+I   G++ T  V +  P  +   RV+A N    G PS     V T E VP 
Sbjct: 641 ----TVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 694

Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S      GS S   + W  V  E  NG   GY + ++ +    V   ++ +    D 
Sbjct: 695 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPL---GVTTWIQTVVTSPDT 751

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
                +   + P + Y + +  Y   G+G  S    +F     P   P  V     + + 
Sbjct: 752 PRYVFRNESIMPFSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSAHSVSSSE 811

Query: 618 LVISWTAMPEIEHNAPHFKYRI-FW 641
           + ++W  +P    N     Y + +W
Sbjct: 812 IEVAWNTIPWKLSNGRLLGYEVQYW 836



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 160/628 (25%), Positives = 247/628 (39%), Gaps = 68/628 (10%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
           L I  VE SD G+YTC V + V  A+       ++           P   V+ PE + AA
Sbjct: 174 LYIAKVEPSDVGNYTCVVMSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 233

Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
           +  TV  EC A G P P+I+W   +G P    P   + +     + I   ++ D G+Y C
Sbjct: 234 KGATVKLECFALGNPVPQINWRRSDGMPF---PAKIKLRKFNGVLEIPAFQQEDAGSYEC 290

Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            A NS G   K+V    L +   P   +  KD       ++    +  G PKP   W+ N
Sbjct: 291 IAENSRG---KNVARGRLTYYAKPHWVQFIKDMEMAVEDSIYWEFQASGKPKPSYRWLKN 347

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
            + L       +E G L I+++   DSG + C A NK G    S  L  V      +  P
Sbjct: 348 GEALVLEERIQIENGALTISNLNVTDSGMFQCIAENKHGLIYSSAELKVVASAPDFSKNP 407

Query: 315 ED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
                +V+ G      C   + P    S  W +G+  +       F++  D  L +   +
Sbjct: 408 MKNLVQVQVGSLVNLDCKPRASPRALSS--WKKGNTVVQEHERISFLK--DGGLKIANVT 463

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAV-----VSWN 424
           + DSG YTC A+ +         L V  P     APSN      +   ++V     V  +
Sbjct: 464 KADSGTYTCTAENQFGKANGTTLLVVTEPTRITLAPSNMD----VSVGESVILPCQVQHD 519

Query: 425 PVSPQSLRGHFRGY-----KVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR 479
           P+       +F G      K  +  EK G  S  +L++   +       K+V   +   R
Sbjct: 520 PLLDIMFTWYFNGALTDFKKDGSHFEKVGGSSSGDLMIRNIQ--LKHSGKYVCMVQ--TR 575

Query: 480 VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKI 539
           V + + A     +E+I      G PG  ++++   +  +   L W +    +  +  Y I
Sbjct: 576 VDSVSSA-----AELIV----RGSPGPPENVKIDEITDTTAQLSWKEGTDNHSPVTSYAI 626

Query: 540 KYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES---- 594
             Q+     VG   +  +P + D  T +A +  L P  +Y   +    K G G  S    
Sbjct: 627 --QARTPFSVGWQTVTTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSE 684

Query: 595 --KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
             +    VP   P  V G G + + LVI+W  +PE   N   F Y + +R       W Q
Sbjct: 685 KVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGV-TTWIQ 743

Query: 653 DDVLDWRQSELVLANQPT--FQPYEIKV 678
             V        V  N+    F PYE+KV
Sbjct: 744 TVVTSPDTPRYVFRNESIMPFSPYEVKV 771



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 152/682 (22%), Positives = 266/682 (39%), Gaps = 88/682 (12%)

Query: 59  GTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSI 118
           G P P   W K+G  +   +RI   N   +L I ++  +D G + C   N  G   S S 
Sbjct: 336 GKPKPSYRWLKNGEALVLEERIQIEN--GALTISNLNVTDSGMFQCIAENKHGLIYS-SA 392

Query: 119 DLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
           +L V+A AP F+  P    +       V  +CK    P     W      + +       
Sbjct: 393 ELKVVASAPDFSKNPMKNLVQVQVGSLVNLDCKPRASPRALSSWKKGNTVVQEHERISFL 452

Query: 176 KVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKT 235
           K G   + I N+ K+D+G Y C A N  G       + V+     IT AP +     G++
Sbjct: 453 KDG--GLKIANVTKADSGTYTCTAENQFGKANGTTLL-VVTEPTRITLAPSNMDVSVGES 509

Query: 236 VVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVAFADS 282
           V+L C+V   P  ++   W  N             E  GG      +GDL I ++    S
Sbjct: 510 VILPCQVQHDPLLDIMFTWYFNGALTDFKKDGSHFEKVGGS----SSGDLMIRNIQLKHS 565

Query: 283 GEYTCFARNKLGTAQGSGSLTVK------EHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
           G+Y C  + ++ +   +  L V+      E+  I +  +     + +  T   + V+  +
Sbjct: 566 GKYVCMVQTRVDSVSSAAELIVRGSPGPPENVKIDEITDTTAQLSWKEGTDNHSPVTSYA 625

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE----A 392
           ++    +  G + +   + P  +    ++ TV + +     ++   A  ++   E    +
Sbjct: 626 IQARTPFSVGWQTVT--TVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPS 683

Query: 393 QATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH-------FRGYKVQTWTE 445
           +   T +   E P +          + V++W+PV  +   G        FR   V TW +
Sbjct: 684 EKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTTWIQ 743

Query: 446 KDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPG 505
                      V + ES        +P S    +V  +N    GP S + +  + E  P 
Sbjct: 744 TVVTSPDTPRYVFRNES-------IMPFSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPT 796

Query: 506 TVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKY-------QSVKGTKVGPLLER 555
              S + A  + SS   + W  +  +  NG L+GY+++Y       +S    KV      
Sbjct: 797 VAPSQVSAHSVSSSEIEVAWNTIPWKLSNGRLLGYEVQYWNNGAEEESSSKVKVAG---- 852

Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEG 610
                    TSA+L GL+ + +Y   +  Y  AG G  S  +        P + P NV  
Sbjct: 853 -------HETSARLRGLKSNLEYYTAVRAYNSAGAGPFSATVNATTKKTPPSQPPGNVVW 905

Query: 611 RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR--RHNTGEAWNQDDVLDWRQSELVLANQ 668
             +T   ++++W  +  +E+ +    Y++F+R    N+ +  N +       +EL+L   
Sbjct: 906 N-ATDTKVLLNWEQVKAMENESEVTGYKVFYRSSSQNSVQVLNTNKT----SAELLL--- 957

Query: 669 PTFQPYEIKVVQTWTEKDGEGS 690
           P  + Y I+V  T    DG  S
Sbjct: 958 PLKEDYIIEVKATTDGGDGSSS 979



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 104/261 (39%), Gaps = 29/261 (11%)

Query: 158 HWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAH 217
            W  NG  I  +  +  +  G N +     R  DTG+Y C ATNS G V         A+
Sbjct: 54  RWQLNGSNIDMSMEHRYKLNGGNLVVFNPNRNWDTGSYQCFATNSFGTVVSREAKLQFAY 113

Query: 218 APEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTIL 267
                   +   +V +G+ VVL C     P P        WI N+     E    R+   
Sbjct: 114 LENFKTKMRSTVSVREGQGVVLLC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQ 169

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGS---LTVKEHTHITDQ--------PED 316
           ETG L I  V  +D G YTC   + +  A+  GS   L ++    + +         PE 
Sbjct: 170 ETGHLYIAKVEPSDVGNYTCVVMSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPET 229

Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
                G +    C A+ +P  +++  W R S+ + F ++ +  + N   L +    + D+
Sbjct: 230 LPAAKGATVKLECFALGNPVPQIN--WRR-SDGMPFPAKIKLRKFNGV-LEIPAFQQEDA 285

Query: 377 GQYTCRAQTELDFIEAQATLT 397
           G Y C A+       A+  LT
Sbjct: 286 GSYECIAENSRGKNVARGRLT 306



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 88/216 (40%), Gaps = 16/216 (7%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P  APS  +    + + +  V+WN +  +   G   GY+VQ W     E S  ++ V  G
Sbjct: 795 PTVAPSQVS-AHSVSSSEIEVAWNTIPWKLSNGRLLGYEVQYWNNGAEEESSSKVKV-AG 852

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
             T+  +       + +  V A+N A  GP S  ++  T +  P             +  
Sbjct: 853 HETSARLRGLKSNLEYYTAVRAYNSAGAGPFSATVNATTKKTPPSQPPGNVVWNATDTKV 912

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            L W  VK  +    + GYK+ Y+S     V  L        +   TSA+L  L     Y
Sbjct: 913 LLNWEQVKAMENESEVTGYKVFYRSSSQNSVQVL--------NTNKTSAELL-LPLKEDY 963

Query: 579 RIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGST 614
            I +   T  GDG+ S+ +  +P     N++ RGST
Sbjct: 964 IIEVKATTDGGDGSSSEQI-RIP--RITNMDARGST 996


>gi|194763236|ref|XP_001963739.1| GF21177 [Drosophila ananassae]
 gi|190618664|gb|EDV34188.1| GF21177 [Drosophila ananassae]
          Length = 2245

 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 176/688 (25%), Positives = 274/688 (39%), Gaps = 102/688 (14%)

Query: 43  EVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGN--YGKSLIIKHVEFSD 98
           +V L    VEL CI    PL +  T+W KDG+ +  +      N  + ++L +     S 
Sbjct: 292 KVKLGTGVVELQCIANARPLHELETLWLKDGLAVETAGVRHTLNDPWNRTLALLQANSSH 351

Query: 99  QGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAE-EETVTFECKASGLPEP 155
            G YTC+V   +G   A S S  L +L  P F          E    V   C   G P P
Sbjct: 352 SGEYTCQVRLRSGGYPAVSASARLQILEPPVFFTPMRAETFGEFGGQVQLPCDVVGEPTP 411

Query: 156 EIHWVHNGKPISQAPPNPRRKVGP-NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
           ++ W  N + +     + R  +   N + I+ L   D   + C A+N  G      ++ V
Sbjct: 412 QVKWFRNAESVDAHIESGRYALSTDNTLVIKKLILDDAAMFQCLASNEAGENSASTWLRV 471

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT--GGRYTILETGDL 272
              AP + + P++   +DGK   ++CR  G+P P + WI+N+ +L     R  ILE+GDL
Sbjct: 472 KTSAPVLEQPPQNVTALDGKDATISCRAVGSPNPNITWIYNETQLVEISSRVQILESGDL 531

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV 332
            I+++  +D+G Y C   N+ G+ +G   L+V   T I   P D  V  G +AT +C   
Sbjct: 532 LISNIRPSDAGLYICVRANEAGSVKGEAFLSVLVRTQIIQPPVDTTVLLGLTATLQCKVS 591

Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
           SDPS+  +I W R  +     +  R     D  L +      D G Y C   +       
Sbjct: 592 SDPSVPYNIDWYREGQAAPISNSQRVGVQADGQLEIQAVRASDVGSYACVVTSPGGNETR 651

Query: 393 QATLTV-QVPLEAPSNFTLIQVID--AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE 449
            A L+V ++P   PSN  + ++ +   +   VSW P           G+        DG 
Sbjct: 652 AARLSVIELPF-PPSNVKVERLPEPLQRSINVSWTP-----------GF--------DGN 691

Query: 450 GSIRELIVNKGESTTTEVDKFV------------------------------PASKNFAR 479
             I + I+ + E   +E++KFV                               A+    R
Sbjct: 692 SPISKFIIQRRE--VSELEKFVGPVPDPLLNWITELSNVSAEQRWILLENLKAATVYQFR 749

Query: 480 VLAFNGAYNGPPSEIISFV-----TPEGVP-GTVQSLEAIPLGSSAFYLKWVKP--EQPN 531
           V A N    G PSE  + V      P G P G V S  ++    S    +W  P  E  N
Sbjct: 750 VSAVNRVGEGSPSEPSNVVELPQEAPSGPPVGFVGSARSM----SEIITQWQPPLEEHRN 805

Query: 532 GVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK----LAGLEPSTKYRIHLAGYTK 587
           G ++GY ++Y+      V       P+     T  A+    +  L     Y + +A Y  
Sbjct: 806 GQILGYILRYRLFGYNNV-------PWSYQNITNEAQRNFLIQELITWKDYIVQIAAYNN 858

Query: 588 AG-----DGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
            G     +G++ K    VP   P  V  +        +SW      + N  +  Y+I   
Sbjct: 859 MGVGVYTEGSKIKTKEGVPEAPPTKVRVQALNSTAARVSWIPPNPQQINGINQGYKI--- 915

Query: 643 RHNTGEAWNQDDVL-DWRQSELVLANQP 669
                +AW + D+  +WR  E  +   P
Sbjct: 916 -----QAWQRRDIDGEWRDFEKRMMTVP 938



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 146/614 (23%), Positives = 245/614 (39%), Gaps = 78/614 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKS----LIIKHVEFSDQGSYTCE 105
           +V+L C   G P PQ  W ++   ++    I  G Y  S    L+IK +   D   + C 
Sbjct: 398 QVQLPCDVVGEPTPQVKWFRNAESVDA--HIESGRYALSTDNTLVIKKLILDDAAMFQCL 455

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN  GE  + +      +AP     P+ + A + +  T  C+A G P P I W++N   
Sbjct: 456 ASNEAGENSASTWLRVKTSAPVLEQPPQNVTALDGKDATISCRAVGSPNPNITWIYNETQ 515

Query: 166 ISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           + +   + R ++     + I N+R SD G Y C   N  G V  + +++VL    +I + 
Sbjct: 516 LVEI--SSRVQILESGDLLISNIRPSDAGLYICVRANEAGSVKGEAFLSVLVRT-QIIQP 572

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKEL---TGGRYTILETGDLKITDVAF 279
           P D   + G T  L C+V   P     ++W    +        R  +   G L+I  V  
Sbjct: 573 PVDTTVLLGLTATLQCKVSSDPSVPYNIDWYREGQAAPISNSQRVGVQADGQLEIQAVRA 632

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVS-----D 334
           +D G Y C   +  G    +  L+V E   +   P + +VE       R   VS     D
Sbjct: 633 SDVGSYACVVTSPGGNETRAARLSVIE---LPFPPSNVKVERLPEPLQRSINVSWTPGFD 689

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT--VTKSSELDSGQY-----TCRAQTEL 387
            +  +S   ++  E  + E   +FV      L   +T+ S + + Q        +A T  
Sbjct: 690 GNSPISKFIIQRREVSELE---KFVGPVPDPLLNWITELSNVSAEQRWILLENLKAATVY 746

Query: 388 DF-----------IEAQATLTVQVPLEAPSNFTLIQVIDAK---KAVVSWNPVSPQSLRG 433
            F             ++ +  V++P EAPS   +  V  A+   + +  W P   +   G
Sbjct: 747 QFRVSAVNRVGEGSPSEPSNVVELPQEAPSGPPVGFVGSARSMSEIITQWQPPLEEHRNG 806

Query: 434 HFRGYKVQ---------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN 484
              GY ++          W+ ++        I N+ +     + + +       ++ A+N
Sbjct: 807 QILGYILRYRLFGYNNVPWSYQN--------ITNEAQRNFL-IQELITWKDYIVQIAAYN 857

Query: 485 GAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWV--KPEQPNGVLMGYKIKY 541
               G  +E     T EGVP      +    L S+A  + W+   P+Q NG+  GYKI+ 
Sbjct: 858 NMGVGVYTEGSKIKTKEGVPEAPPTKVRVQALNSTAARVSWIPPNPQQINGINQGYKIQA 917

Query: 542 QSVKGTK------VGPLLERLPYISDPTT-TSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
              +            ++   P + DP    +A L+GLE   +Y + +  +T  GDG  S
Sbjct: 918 WQRRDIDGEWRDFEKRMMTVPPSLIDPLAEQTAVLSGLEKFAEYNVSVLCFTDPGDGVAS 977

Query: 595 KYLFYVPFKNPDNV 608
                VP K  D+V
Sbjct: 978 ---IQVPVKTLDDV 988



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 148/624 (23%), Positives = 246/624 (39%), Gaps = 116/624 (18%)

Query: 45   ALRNKKVELFCIFGGTPLPQTIWSKDGVP-INPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
            AL  K   + C   G+P P   W  +    +  S R+     G  L+I ++  SD G Y 
Sbjct: 487  ALDGKDATISCRAVGSPNPNITWIYNETQLVEISSRVQILESG-DLLISNIRPSDAGLYI 545

Query: 104  CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEP--EIHWVH 161
            C  +N  G  K  +  LSVL        P         T T +CK S  P     I W  
Sbjct: 546  CVRANEAGSVKGEAF-LSVLVRTQIIQPPVDTTVLLGLTATLQCKVSSDPSVPYNIDWYR 604

Query: 162  NGKPISQAPPNPRRKVG---PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA-- 216
             G+    AP +  ++VG     ++ I+ +R SD G+Y C  T+  G   +   ++V+   
Sbjct: 605  EGQ---AAPISNSQRVGVQADGQLEIQAVRASDVGSYACVVTSPGGNETRAARLSVIELP 661

Query: 217  ---------HAPEITE--------------APKDEYTVDGKTVVLTCRVFG-APKPEVNW 252
                       PE  +              +P  ++ +  + V    +  G  P P +NW
Sbjct: 662  FPPSNVKVERLPEPLQRSINVSWTPGFDGNSPISKFIIQRREVSELEKFVGPVPDPLLNW 721

Query: 253  IHNQKELTG-GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT 311
            I     ++   R+ +LE  +LK   V      ++   A N++G  +GS S    E +++ 
Sbjct: 722  ITELSNVSAEQRWILLE--NLKAATVY-----QFRVSAVNRVG--EGSPS----EPSNVV 768

Query: 312  DQPEDYEVEAGQSATFRCNAVS--------DPSLKLS--------IVWLR----GSEPID 351
            + P+  E  +G    F  +A S         P L+          I+  R     + P  
Sbjct: 769  ELPQ--EAPSGPPVGFVGSARSMSEIITQWQPPLEEHRNGQILGYILRYRLFGYNNVPWS 826

Query: 352  FESEPRFVQSN----------DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            +++     Q N          DY + +   + +  G YT          E     T +  
Sbjct: 827  YQNITNEAQRNFLIQELITWKDYIVQIAAYNNMGVGVYT----------EGSKIKTKEGV 876

Query: 402  LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRE------- 454
             EAP     +Q +++  A VSW P +PQ + G  +GYK+Q W  +D +G  R+       
Sbjct: 877  PEAPPTKVRVQALNSTAARVSWIPPNPQQINGINQGYKIQAWQRRDIDGEWRDFEKRMMT 936

Query: 455  ----LIVNKGESTT--TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ 508
                LI    E T   + ++KF  A  N + VL F    +G  S  +   T + VP  + 
Sbjct: 937  VPPSLIDPLAEQTAVLSGLEKF--AEYNVS-VLCFTDPGDGVASIQVPVKTLDDVPDEIT 993

Query: 509  SLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP-LLERLPYISDPTTTSA 567
            +L    +   +  + W  P   NG+L GY ++YQ     K  P  ++ +   +D T  + 
Sbjct: 994  ALHFDDVSDRSVKVLWAPPRFSNGILTGYTVRYQ----VKDRPETMKSVNLTADDTELTV 1049

Query: 568  KLAGLEPSTKYRIHLAGYTKAGDG 591
            +   L+ +T Y   +  +T+ G G
Sbjct: 1050 E--QLQATTHYWFEICAWTRVGSG 1071



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 153/405 (37%), Gaps = 49/405 (12%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK--HVEFSDQGSYTCEVSNGV 110
           L C   G P P   W KDGVP+        G++  S   +       D GSY C   N  
Sbjct: 114 LQCHALGYPQPMYRWLKDGVPV--------GDFSSSQFYRFHSTRREDAGSYQCIARNDA 165

Query: 111 GEAKSYSIDLSVLAAPYF--TVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQ 168
           G   S   D+ V     F  T E      +    V        +P P + W     P++ 
Sbjct: 166 GSILSEKSDVVVAYMGVFENTTEGRLTVTSGHPAVFDMPAIDSVPTPSVMWQSADGPLNY 225

Query: 169 APPNPRRKVGPNRITIENLRKSDTGNYGCNATN-------SLGYVYKDV----YVNVLAH 217
                  +   N++ I +  + D   Y   ATN       S  +VY +V    +V V   
Sbjct: 226 DIKYAFTQA--NQLIILSADEGDRRGYRARATNTQLGKEESSAFVYLNVSGDPFVEV--- 280

Query: 218 APEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVN--WIHN--QKELTGGRYTILETGD- 271
           APEI   P+D     G  VV L C     P  E+   W+ +    E  G R+T+ +  + 
Sbjct: 281 APEIIVRPQDLKVKLGTGVVELQCIANARPLHELETLWLKDGLAVETAGVRHTLNDPWNR 340

Query: 272 -LKITDVAFADSGEYTCFARNKLG---TAQGSGSLTVKE-HTHITDQPEDYEVEAGQSAT 326
            L +     + SGEYTC  R + G       S  L + E     T    +   E G    
Sbjct: 341 TLALLQANSSHSGEYTCQVRLRSGGYPAVSASARLQILEPPVFFTPMRAETFGEFGGQVQ 400

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEP-RFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
             C+ V +P+ ++   W R +E +D   E  R+  S D +L + K    D+  + C A  
Sbjct: 401 LPCDVVGEPTPQVK--WFRNAESVDAHIESGRYALSTDNTLVIKKLILDDAAMFQCLASN 458

Query: 386 ELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVSWNPV 426
           E     A   L V+    V  + P N T    +D K A +S   V
Sbjct: 459 EAGENSASTWLRVKTSAPVLEQPPQNVT---ALDGKDATISCRAV 500



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 72/154 (46%), Gaps = 12/154 (7%)

Query: 480  VLAFNGAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMG 536
            VL FN    GP +   +    E VP G  ++++A P+ S+   L W  P+Q   NG ++G
Sbjct: 1676 VLPFNSQGPGPATPPAAVYVGEAVPTGEPRAVDAAPISSTEVRLLWKPPKQSMQNGDILG 1735

Query: 537  YKIKY---QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
            YKI Y    S +  + G   E    +   T TS  L  L+  T+YRI L  +  AGDG  
Sbjct: 1736 YKIFYLVTYSPQALEPGRKWEEEIEVVSATATSHSLVFLDKFTEYRIQLLAFNPAGDGPR 1795

Query: 594  S-----KYLFYVPFKNPDNVEGRGSTPNNLVISW 622
            S     K L  VP   P N+     T  +L +SW
Sbjct: 1796 SAPITVKTLPGVP-SAPLNLRFADITMQSLEVSW 1828



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 115/301 (38%), Gaps = 29/301 (9%)

Query: 128 FTVEPEFINA--AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           FT  P    +  +E  T   +C A G P+P   W+ +G P+     +   +         
Sbjct: 95  FTTHPSSSGSIVSEGSTKILQCHALGYPQPMYRWLKDGVPVGDFSSSQFYR-------FH 147

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTC-RVF 243
           + R+ D G+Y C A N  G +  +    V+A+        +   TV  G   V     + 
Sbjct: 148 STRREDAGSYQCIARNDAGSILSEKSDVVVAYMGVFENTTEGRLTVTSGHPAVFDMPAID 207

Query: 244 GAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQG--- 298
             P P V W      L    +Y   +   L I      D   Y   A N +LG  +    
Sbjct: 208 SVPTPSVMWQSADGPLNYDIKYAFTQANQLIILSADEGDRRGYRARATNTQLGKEESSAF 267

Query: 299 -----SGSLTVKEHTHITDQPEDYEVEAGQSAT-FRCNAVSDPSLKLSIVWLRGSEPIDF 352
                SG   V+    I  +P+D +V+ G      +C A + P  +L  +WL+    ++ 
Sbjct: 268 VYLNVSGDPFVEVAPEIIVRPQDLKVKLGTGVVELQCIANARPLHELETLWLKDGLAVET 327

Query: 353 ESEPRFVQSN-DYSLTVTKSSELDSGQYTCRAQTE---LDFIEAQATLTVQVPLEAPSNF 408
                 +    + +L + +++   SG+YTC+ +        + A A L +   LE P  F
Sbjct: 328 AGVRHTLNDPWNRTLALLQANSSHSGEYTCQVRLRSGGYPAVSASARLQI---LEPPVFF 384

Query: 409 T 409
           T
Sbjct: 385 T 385



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 86/206 (41%), Gaps = 23/206 (11%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV-QTWTEKDGEGSIRELIVNK 459
            PL+  +N T      +   VV W  V  Q   G   G+KV     ++ G+  + + I + 
Sbjct: 1296 PLDVQANAT-----SSTTVVVRWGEVPKQHRNGQIDGFKVFYAAADRPGQPVLHKTIPSN 1350

Query: 460  GESTTT--EVDKFVPASKNFARVLAF----NGAYNGPPSEIISFVTPEGVPGTVQSLEAI 513
               TTT  E+ KFV       +VLA+    NGA + PP  + +F    GVP  V S   +
Sbjct: 1351 STFTTTLTELKKFV---VYHVQVLAYTRLGNGALSAPPIRVQTFEDTPGVPSNV-SFPDV 1406

Query: 514  PLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLE 573
             L  +   + W  P  PNG +  Y++ Y ++ G+         P    P+  + +   L 
Sbjct: 1407 TL--TMARIIWDDPIDPNGEIQAYQVTY-TLNGSANLNYSREFP----PSDRTFRATQLL 1459

Query: 574  PSTKYRIHLAGYTKAGDGAESKYLFY 599
            P   Y   +   T+ G G  +  L Y
Sbjct: 1460 PEKYYSFSVTAKTRLGWGKTATALVY 1485



 Score = 39.7 bits (91), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 3/79 (3%)

Query: 467  VDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVK 526
            +DKF   ++   ++LAFN A +GP S  I+  T  GVP    +L    +   +  + W  
Sbjct: 1774 LDKF---TEYRIQLLAFNPAGDGPRSAPITVKTLPGVPSAPLNLRFADITMQSLEVSWDP 1830

Query: 527  PEQPNGVLMGYKIKYQSVK 545
            P+  NG ++GY + Y++ +
Sbjct: 1831 PKFLNGEILGYLVTYETTE 1849


>gi|426333444|ref|XP_004028287.1| PREDICTED: contactin-2 [Gorilla gorilla gorilla]
          Length = 1040

 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 166/623 (26%), Positives = 266/623 (42%), Gaps = 45/623 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWTTAE----PTLQIPSVSFEDEGTYEC 306

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           E  N  G   +    + V A P +        A     + + C A+G P P + W+ NG+
Sbjct: 307 EAENSKGR-DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGE 365

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           P++      R +V    +    L   D+G Y C A N  G +Y    + V A AP+    
Sbjct: 366 PLAS---QNRVEVLAGDLQFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLN 422

Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           P         G  +V+ C+   APK  V W    + L    R T+   G L I +++ +D
Sbjct: 423 PVRRLIPAARGGEIVIPCQPRSAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSD 482

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP++ L+ 
Sbjct: 483 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTF 542

Query: 342 VWLRGSEPIDFESEPRFVQSNDY-----SLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W     PIDF+      +  +       LT+  +     G+YTC AQT +D    +AT+
Sbjct: 543 TWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATV 602

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GSIR 453
            V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G+   +R
Sbjct: 603 LVRGPPGPPGGVVVRDIGDTTIQ-LSWS----RGFDNHSPIAKYTLQARTPPAGKWKQVR 657

Query: 454 ELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGVPGTVQ 508
               N +G + T +V    P      RV+A N    G  +GP S+I    T E  P    
Sbjct: 658 TNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKI---RTREAAPSVAP 714

Query: 509 SLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565
           S  +   G+     + W  +  E  NG   GY + ++    T       R+P  +D    
Sbjct: 715 SGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQ--TARVPG-ADAQYF 771

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGSTPNNLVI 620
                 + P T + + +  Y + GDG ES   L Y     P   P  V  +G + + + +
Sbjct: 772 VYSNESVRPYTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNV 831

Query: 621 SWTAMPEIEHNAPHFKYRI-FWR 642
           +W  + + + N     Y I +W+
Sbjct: 832 TWEPVQQ-DMNGILLGYEIRYWK 853



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 150/375 (40%), Gaps = 38/375 (10%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           ++V L C    +P     W  +G  + + P  R  Q   G  +I+   +  D G Y C  
Sbjct: 55  EQVLLACRARASPPATYWWKMNGTEMKLEPGSR-HQLVGGNLVIMNPTKAQDAGVYQCLA 113

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIH------- 158
           SN VG   S    L       F    EF     +   T E     LP  P  H       
Sbjct: 114 SNPVGTVVSREAILR------FGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYR 167

Query: 159 WVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY----- 211
           W+ N  P +  P + R  V      + I     SD GNY C AT+ + +  K V+     
Sbjct: 168 WLLNEFP-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQ 226

Query: 212 VNVLAH-----APEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           +N+ A      AP I    P + Y + G+ V L C  FG P P + W      L+  ++T
Sbjct: 227 LNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-PQWT 285

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
             E   L+I  V+F D G Y C A N  G     G + V+          D E + G + 
Sbjct: 286 TAEP-TLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNL 344

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P  + ++ WLR  EP+  ++    +  +   L  +K S  DSG Y C A+ 
Sbjct: 345 RWGCAAAGKP--RPTVRWLRNGEPLASQNRVEVLAGD---LQFSKLSLEDSGMYQCVAEN 399

Query: 386 ELDFIEAQATLTVQV 400
           +   I A A L VQ 
Sbjct: 400 KHGTIYASAELAVQA 414



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 151/654 (23%), Positives = 237/654 (36%), Gaps = 75/654 (11%)

Query: 88  SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
           +L I     SD G+Y+C      + S     +K   ++L+     L AP      P    
Sbjct: 191 NLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDTRLFAPSIKARFPAETY 250

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + VT EC A G P P I W      +S     P+       + I ++   D G Y 
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-----PQWTTAEPTLQIPSVSFEDEGTYE 305

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V A  PE  +   D     G  +   C   G P+P V W+ N 
Sbjct: 306 CEAENSKGRDTVQGRIIVQAQ-PEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNG 364

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
           + L       +  GDL+ + ++  DSG Y C A NK GT   S  L V+         P 
Sbjct: 365 EPLASQNRVEVLAGDLQFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPV 424

Query: 316 DYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
              + A  G      C   S P  K  ++W +G+E +   S  R   + D +L +   S 
Sbjct: 425 RRLIPAARGGEIVIPCQPRSAP--KAVVLWSKGTEILVNSS--RVTVTPDGTLIIRNISR 480

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APS--------NFTLIQVIDAKKAVV- 421
            D G+YTC A+  +    +   L+V+   +   APS        N TL Q   +    + 
Sbjct: 481 SDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTL-QCHASHDPTMD 539

Query: 422 ---SWN----PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
              +W     P+      GH+R   V+   E  G+ +I    +  G   T      V ++
Sbjct: 540 LTFTWTLDDFPIDFDKPGGHYRRTNVK---ETIGDLTILNAQLRHGGKYTCMAQTVVDSA 596

Query: 475 KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
              A VL                            +    +G +   L W +    +  +
Sbjct: 597 SKEATVLVRGPPG------------------PPGGVVVRDIGDTTIQLSWSRGFDNHSPI 638

Query: 535 MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
             Y ++ ++    K   +    P   +    +A++ GL P   Y   +      G G  S
Sbjct: 639 AKYTLQARTPPAGKWKQVRTN-PANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPS 697

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +     P   P  + G G  P  L+++WT M     N   F Y + +RR  +  
Sbjct: 698 GPSSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTH 757

Query: 649 AWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
            W    V        V +N+    + P+E+K+       DG  S+  L+ +  E
Sbjct: 758 -WQTARVPGADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTALVYSAEE 810



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 142/614 (23%), Positives = 227/614 (36%), Gaps = 84/614 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P+   +R+        L    +   D G Y C   N  G   
Sbjct: 348 CAAAGKPRPTVRWLRNGEPLASQNRVEV--LAGDLQFSKLSLEDSGMYQCVAENKHGTIY 405

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F + P    I AA    +   C+    P+  + W    + +  +  
Sbjct: 406 A-SAELAVQALAPDFRLNPVRRLIPAARGGEIVIPCQPRSAPKAVVLWSKGTEILVNSS- 463

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V P+  + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 464 --RVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 520

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G  + L C     P  ++ +     +        GG Y    + ET GDL I +    
Sbjct: 521 NLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLR 580

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS---------------- 324
             G+YTC A+  + +A  S   TV               + G +                
Sbjct: 581 HGGKYTCMAQTVVDSA--SKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPI 638

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQ 378
           A +   A + P+ K   V    + P + E      Q        DY   V  S+ L +G+
Sbjct: 639 AKYTLQARTPPAGKWKQV---RTNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGE 695

Query: 379 YTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGY 438
            +    +++   EA  ++                     + +V+W P+S +   G   GY
Sbjct: 696 PSG-PSSKIRTREAAPSVAPSG--------LSGGGGAPGELIVNWTPMSREYQNGDGFGY 746

Query: 439 KVQ-------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            +         W      G+  +  V   ES    V  + P      ++ ++N   +GP 
Sbjct: 747 LLSFRRQGSTHWQTARVPGADAQYFVYSNES----VRPYTPFE---VKIRSYNRRGDGPE 799

Query: 492 SEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKGTKV 549
           S      + E  P    + + A  + SS   + W   +Q  NG+L+GY+I+Y      + 
Sbjct: 800 SLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGILLGYEIRYWKAGDKEA 859

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVE 609
                R   +     TSA+++GL P+TKY + +  Y +AG G  S        K P    
Sbjct: 860 AADRVRTAGLE----TSARVSGLHPNTKYHVTVRAYNRAGTGPASPSANATTMKPPPR-- 913

Query: 610 GRGSTPNNLVISWT 623
                P N  ISWT
Sbjct: 914 ---RPPGN--ISWT 922



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 114/300 (38%), Gaps = 34/300 (11%)

Query: 125 APYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P F  +P    F   + EE V   C+A   P     W  NG  +   P +  + VG N 
Sbjct: 36  GPVFEDQPLSVLFPEESTEEQVLLACRARASPPATYWWKMNGTEMKLEPGSRHQLVGGNL 95

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTC 240
           + +   +  D G Y C A+N +G V     +       E ++  +D   T +G  V+L C
Sbjct: 96  VIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKTHEGWGVMLPC 155

Query: 241 RVFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGT 295
                 P     W+ N+      T GR+ + + TG+L I     +D G Y+C A + +  
Sbjct: 156 NPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDF 215

Query: 296 AQGSGSLTVKEHTHITDQPEDYEVEA---------------GQSATFRCNAVSDPSLKLS 340
           +  S      +   +    ED  + A               GQ  T  C A  +P  +  
Sbjct: 216 STKS---VFSKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPR-- 270

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +    +D    P++  + + +L +   S  D G Y C A+        Q  + VQ 
Sbjct: 271 IKWRK----VDGSLSPQWTTA-EPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQA 325


>gi|197098330|ref|NP_001124990.1| contactin-2 precursor [Pongo abelii]
 gi|55726609|emb|CAH90069.1| hypothetical protein [Pongo abelii]
          Length = 1040

 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 165/629 (26%), Positives = 267/629 (42%), Gaps = 57/629 (9%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWTTAE----PTLQIPSVSFEDEGTYEC 306

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEE------ETVTFECKASGLPEPEIH 158
           E  N  G         +V        +PE++    +        + + C A+G P P + 
Sbjct: 307 EAENSKGRD-------TVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVR 359

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P++      R +V    +    L   D+G Y C A N  G +Y    + V A A
Sbjct: 360 WLRNGEPLAS---QNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALA 416

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKIT 275
           P+    P         G  +V+ C+   APK  V W    + L    R T+   G L I 
Sbjct: 417 PDFRLNPVRRLIPAARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIR 476

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           +++ +D G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP
Sbjct: 477 NISRSDEGKYTCFADNFMGKANSTGILSVRDATKITLAPSSADINLGDNLTLQCHASHDP 536

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDY-----SLTVTKSSELDSGQYTCRAQTELDFI 390
           ++ L+  W     PIDF+      +  +       LT+  +     G+YTC AQT +D  
Sbjct: 537 TMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSA 596

Query: 391 EAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDG 448
             +AT+ V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G
Sbjct: 597 SKEATVLVRGPPGPPGGVVVRDIGDTTIQ-LSWS----RGFDNHSPIAKYTLQARTPPAG 651

Query: 449 E-GSIRELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEG 502
           +   +R    N +G + T +V    P      RV+A N    G  +GP S+I    T E 
Sbjct: 652 KWKQVRTNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKI---RTKEA 708

Query: 503 VPGTVQSLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
            P    S  +   G+     + W  +  E  NG   GY + ++    T       R+P  
Sbjct: 709 APSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQ--TARVPG- 765

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGST 614
           +D          + P T + + +  Y + GDG ES   L Y     P   P  V  +G +
Sbjct: 766 ADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVS 825

Query: 615 PNNLVISWTAMPEIEHNAPHFKYRI-FWR 642
            + + ++W  + + + N     Y I +W+
Sbjct: 826 SSEMNVTWEPVQQ-DMNGILLGYEIRYWK 853



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 151/374 (40%), Gaps = 38/374 (10%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           ++V L C    +P     W  +G  + + P  R  Q   G  +I+   +  D G Y C  
Sbjct: 55  EQVLLACRARASPPATYRWKMNGTEMKLEPGSR-HQLVGGNLVIMNPTKAQDAGVYQCLA 113

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIH------- 158
           SN VG   S    L       F    EF     +   T E     LP  P  H       
Sbjct: 114 SNPVGTVVSREAILR------FGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYR 167

Query: 159 WVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY----- 211
           W+ N  P +  P + R  V      + I     SD GNY C AT+ + +  K V+     
Sbjct: 168 WLLNEFP-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQ 226

Query: 212 VNVLAH-----APEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           +N++A      AP I    P + Y + G+ V L C  FG P P + W      L+  ++T
Sbjct: 227 LNLVAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-PQWT 285

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
             E   L+I  V+F D G Y C A N  G     G + V+          D E + G + 
Sbjct: 286 TAEP-TLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNL 344

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P  + ++ WLR  EP+  ++    +  +   L  +K S  DSG Y C A+ 
Sbjct: 345 RWGCAAAGKP--RPTVRWLRNGEPLASQNRVEVLAGD---LRFSKLSLEDSGMYQCVAEN 399

Query: 386 ELDFIEAQATLTVQ 399
           +   I A A L VQ
Sbjct: 400 KHGTIYASAELAVQ 413



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 148/648 (22%), Positives = 232/648 (35%), Gaps = 70/648 (10%)

Query: 83  GNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET 142
           GNY   L   H++FS     T  V +   +    + D  + A       P    A   + 
Sbjct: 203 GNY-SCLATSHMDFS-----TKSVFSKFAQLNLVAEDTRLFAPSIKARFPAETYALVGQQ 256

Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202
           VT EC A G P P I W      +S     P+       + I ++   D G Y C A NS
Sbjct: 257 VTLECFAFGNPVPRIKWRKVDGSLS-----PQWTTAEPTLQIPSVSFEDEGTYECEAENS 311

Query: 203 LGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG 262
            G       + V A  PE  +   D     G  +   C   G P+P V W+ N + L   
Sbjct: 312 KGRDTVQGRIIVQAQ-PEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGEPLASQ 370

Query: 263 RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPEDYEVEA 321
               +  GDL+ + ++  DSG Y C A NK GT   S  L V+         P    + A
Sbjct: 371 NRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPA 430

Query: 322 --GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQY 379
             G      C   + P  K  ++W +G+E +   S  R   + D +L +   S  D G+Y
Sbjct: 431 ARGGEIVIPCQPRAAP--KAVVLWSKGTEILVNSS--RVTVTPDGTLIIRNISRSDEGKY 486

Query: 380 TCRAQTELDFIEAQATLTVQVPLE---APS--------NFTLIQVIDAKKAVV----SWN 424
           TC A   +    +   L+V+   +   APS        N TL Q   +    +    +W 
Sbjct: 487 TCFADNFMGKANSTGILSVRDATKITLAPSSADINLGDNLTL-QCHASHDPTMDLTFTWT 545

Query: 425 ----PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
               P+      GH+R   V+   E  G+ +I    +  G   T      V ++   A V
Sbjct: 546 LDDFPIDFDKPGGHYRRTNVK---ETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATV 602

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
           L                            +    +G +   L W +    +  +  Y ++
Sbjct: 603 LVRGPPG------------------PPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQ 644

Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------ 594
            ++    K   +    P   +    +A++ GL P   Y   +      G G  S      
Sbjct: 645 ARTPPAGKWKQVRTN-PANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKI 703

Query: 595 KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
           +     P   P  + G G  P  L+++WT M     N   F Y + +RR  +   W    
Sbjct: 704 RTKEAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTH-WQTAR 762

Query: 655 VLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
           V        V +N+    + P+E+K+       DG  S+  L+ +  E
Sbjct: 763 VPGADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTALVYSAEE 810



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 135/588 (22%), Positives = 219/588 (37%), Gaps = 83/588 (14%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P+   +R+        L    +   D G Y C   N  G   
Sbjct: 348 CAAAGKPRPTVRWLRNGEPLASQNRVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTIY 405

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F + P    I AA    +   C+    P+  + W    + +  +  
Sbjct: 406 A-SAELAVQALAPDFRLNPVRRLIPAARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSS- 463

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V P+  + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 464 --RVTVTPDGTLIIRNISRSDEGKYTCFADNFMGKANSTGILSV-RDATKITLAPSSADI 520

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G  + L C     P  ++ +     +        GG Y    + ET GDL I +    
Sbjct: 521 NLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLR 580

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS---------------- 324
             G+YTC A+  + +A  S   TV               + G +                
Sbjct: 581 HGGKYTCMAQTVVDSA--SKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPI 638

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQ 378
           A +   A + P+ K   V    + P + E      Q        DY   V  S+ L +G+
Sbjct: 639 AKYTLQARTPPAGKWKQV---RTNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGE 695

Query: 379 YTCRAQTELDFIEAQATLTVQVPLEAPS---NFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
                        +  +  ++    APS   +          + +V+W P+S +   G  
Sbjct: 696 ------------PSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDG 743

Query: 436 RGYKVQ-------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
            GY +         W      G+  +  V   ES    V  + P      ++ ++N   +
Sbjct: 744 FGYLLSFRRQGSTHWQTARVPGADAQYFVYSNES----VRPYTPFE---VKIRSYNRRGD 796

Query: 489 GPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKG 546
           GP S      + E  P    + + A  + SS   + W   +Q  NG+L+GY+I+Y     
Sbjct: 797 GPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGILLGYEIRYWKAGD 856

Query: 547 TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            +      R   +     TSA+++GL P+TKY + +  Y +AG G  S
Sbjct: 857 KEAAADRVRTAGLD----TSARVSGLHPNTKYHVTVRAYNRAGTGPAS 900



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 115/296 (38%), Gaps = 28/296 (9%)

Query: 125 APYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P F  +P    F   + EE V   C+A   P     W  NG  +   P +  + VG N 
Sbjct: 36  GPVFEDQPLSVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNL 95

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTC 240
           + +   +  D G Y C A+N +G V     +       E ++  +D   T +G  V+L C
Sbjct: 96  VIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKTHEGWGVMLPC 155

Query: 241 RVFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGT 295
                 P     W+ N+      T GR+ + + TG+L I     +D G Y+C A + +  
Sbjct: 156 NPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDF 215

Query: 296 AQGS-----GSLT-VKEHTHI------TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVW 343
           +  S       L  V E T +         P +     GQ  T  C A  +P  +  I W
Sbjct: 216 STKSVFSKFAQLNLVAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPR--IKW 273

Query: 344 LRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            +    +D    P++  + + +L +   S  D G Y C A+        Q  + VQ
Sbjct: 274 RK----VDGSLSPQWTTA-EPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQ 324


>gi|149036840|gb|EDL91458.1| rCG56294, isoform CRA_a [Rattus norvegicus]
          Length = 644

 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 184/420 (43%), Gaps = 32/420 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+PQ  W + DG+P     +I    +   L I + +  D GSY 
Sbjct: 239 AAKGSTVKLECFALGNPVPQINWRRSDGMPF--PTKIKLRKFNGVLEIPNFQQEDTGSYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    L+  A PY+    + +  A E+++ +EC+ASG P+P   W+ NG
Sbjct: 297 CIAENSRGKNVARG-RLTYYAKPYWVQLLKDVETAVEDSLYWECRASGKPKPSYRWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +       R ++    +TI NL  SD+G + C A N  G +Y    + VLA AP+ + 
Sbjct: 356 DALVL---EERIQIENGALTIANLNVSDSGMFQCIAENKHGLIYSSAELKVLASAPDFSR 412

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
            P  +      G  V+L C+   +P+    W      +    R ++L  G LKI +V  A
Sbjct: 413 NPMKKMIQVQVGSLVILDCKPSASPRALSFWKKGDTVVREQARISLLNDGGLKIMNVTKA 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A G+  L V E T I   P + +V  G+S    C    DP L + 
Sbjct: 473 DAGIYTCIAENQFGKANGTTQLVVTEPTRIILAPSNMDVAVGESIILPCQVQHDPLLDIM 532

Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W       DF+ +    +    S+   L +       SG+Y C  QT +D + + A L
Sbjct: 533 FAWYFNGTLTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAAEL 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
                        +++ +  K   V+      QS  GH     +  W  K  E  +R L+
Sbjct: 593 -------------IVRALGRKAPTVTAQLYRMQSRLGH-----LSLWAGKMSEQYLRPLM 634



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 144/346 (41%), Gaps = 43/346 (12%)

Query: 89  LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE----------------- 131
           L I  VE SD G+YTC V++ V  A+       VL +P   V                  
Sbjct: 181 LYIAKVEPSDVGNYTCVVTSTVTNAR-------VLGSPTPLVLRSDGVMGEYEPKIELQF 233

Query: 132 PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKS 190
           PE + AA+  TV  EC A G P P+I+W   +G P    P   + +     + I N ++ 
Sbjct: 234 PETLPAAKGSTVKLECFALGNPVPQINWRRSDGMPF---PTKIKLRKFNGVLEIPNFQQE 290

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKP 248
           DTG+Y C A NS G   K+V    L +   P   +  KD  T    ++   CR  G PKP
Sbjct: 291 DTGSYECIAENSRG---KNVARGRLTYYAKPYWVQLLKDVETAVEDSLYWECRASGKPKP 347

Query: 249 EVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT 308
              W+ N   L       +E G L I ++  +DSG + C A NK G    S  L V    
Sbjct: 348 SYRWLKNGDALVLEERIQIENGALTIANLNVSDSGMFQCIAENKHGLIYSSAELKVLASA 407

Query: 309 -HITDQP--EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
              +  P  +  +V+ G      C   + P   LS  W +G   +    + R    ND  
Sbjct: 408 PDFSRNPMKKMIQVQVGSLVILDCKPSASPR-ALSF-WKKGDTVV--REQARISLLNDGG 463

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNF 408
           L +   ++ D+G YTC A+ +         L V  P   + APSN 
Sbjct: 464 LKIMNVTKADAGIYTCIAENQFGKANGTTQLVVTEPTRIILAPSNM 509



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 163/414 (39%), Gaps = 38/414 (9%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFSDQGSY 102
           V   +KK+ L C   G P P   W  +G  I+ S D   + N G  ++I      D GSY
Sbjct: 39  VGSEDKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLNGGNLIVINPNRNWDTGSY 98

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLP----EPEI 157
            C  +N +G   S    L       F       ++  E + V   C   G P    E   
Sbjct: 99  QCFATNSLGTIVSREAKLQFAYLENFKSRMRSRVSVREGQGVVLLC---GPPPHSGELSY 155

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDVYVN 213
            WV N  P S    + RR V      + I  +  SD GNY C  T+++    V       
Sbjct: 156 AWVFNEYP-SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNARVLGSPTPL 214

Query: 214 VL-------AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           VL        + P+I  + P+      G TV L C   G P P++NW  +       +  
Sbjct: 215 VLRSDGVMGEYEPKIELQFPETLPAAKGSTVKLECFALGNPVPQINWRRSDGMPFPTKIK 274

Query: 266 ILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
           + +  G L+I +    D+G Y C A N  G     G LT     +     +D E     S
Sbjct: 275 LRKFNGVLEIPNFQQEDTGSYECIAENSRGKNVARGRLTYYAKPYWVQLLKDVETAVEDS 334

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             + C A   P  K S  WL+  + +  E     +Q  + +LT+   +  DSG + C A+
Sbjct: 335 LYWECRASGKP--KPSYRWLKNGDALVLEER---IQIENGALTIANLNVSDSGMFQCIAE 389

Query: 385 TELDFIEAQATLTVQVPLEAPSNFT------LIQVIDAKKAVVSWNP-VSPQSL 431
            +   I + A L V   L +  +F+      +IQV      ++   P  SP++L
Sbjct: 390 NKHGLIYSSAELKV---LASAPDFSRNPMKKMIQVQVGSLVILDCKPSASPRAL 440



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 125/300 (41%), Gaps = 32/300 (10%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L  P F  EP    F   +E++ +T  C+A G P P   W  NG  I  +  +  +  G
Sbjct: 22  LLQGPVFVKEPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLNG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N I I   R  DTG+Y C ATNSLG +         A+        +   +V +G+ VV
Sbjct: 82  GNLIVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKSRMRSRVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        W+ N+     E    R+   ETG L I  V  +D G YTC 
Sbjct: 142 LLC----GPPPHSGELSYAWVFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCV 197

Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
             + +  A+  GS   L ++    + +         PE      G +    C A+ +P  
Sbjct: 198 VTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIELQFPETLPAAKGSTVKLECFALGNPVP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +++  W R S+ + F ++ +  + N   L +    + D+G Y C A+       A+  LT
Sbjct: 258 QIN--W-RRSDGMPFPTKIKLRKFNGV-LEIPNFQQEDTGSYECIAENSRGKNVARGRLT 313


>gi|397504882|ref|XP_003823009.1| PREDICTED: contactin-2 [Pan paniscus]
          Length = 1040

 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 166/623 (26%), Positives = 266/623 (42%), Gaps = 45/623 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWTTAE----PTLQIPSVSFEDEGTYEC 306

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           E  N  G   +    + V A P +        A     + + C A+G P P + W+ NG+
Sbjct: 307 EAENSKGR-DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGE 365

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           P++      R +V    +    L   D+G Y C A N  G +Y    + V A AP+    
Sbjct: 366 PLAS---QNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLN 422

Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           P         G  +V+ C+   APK  V W    + L    R T+   G L I +++ +D
Sbjct: 423 PVRRLIPAARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSD 482

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP++ L+ 
Sbjct: 483 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTF 542

Query: 342 VWLRGSEPIDFESEPRFVQSNDY-----SLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W     PIDF+      +  +       LT+  +     G+YTC AQT +D    +AT+
Sbjct: 543 TWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATV 602

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GSIR 453
            V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G+   +R
Sbjct: 603 LVRGPPGPPGGVVVRDIGDTTIQ-LSWS----RGFDNHSPIAKYTLQARTPPAGKWKQVR 657

Query: 454 ELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGVPGTVQ 508
               N +G + T +V    P      RV+A N    G  +GP S+I    T E  P    
Sbjct: 658 TNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKI---RTREAAPSVAP 714

Query: 509 SLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565
           S  +   G+     + W  +  E  NG   GY + ++    T       R+P  +D    
Sbjct: 715 SGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQ--TARVPG-ADAQYF 771

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGSTPNNLVI 620
                 + P T + + +  Y + GDG ES   L Y     P   P  V  +G + + + +
Sbjct: 772 VYSNESVRPYTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNV 831

Query: 621 SWTAMPEIEHNAPHFKYRI-FWR 642
           +W  + + + N     Y I +W+
Sbjct: 832 TWEPVQQ-DMNGILLGYEIRYWK 853



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 150/375 (40%), Gaps = 38/375 (10%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           ++V L C    +P     W  +G  + + P  R  Q   G  +I+   +  D G Y C  
Sbjct: 55  EQVLLACRARASPPATYRWKMNGTEMKLEPGSR-HQLVGGNLVIMNPTKAQDAGVYQCLA 113

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIH------- 158
           SN VG   S    L       F    EF     +   T E     LP  P  H       
Sbjct: 114 SNPVGTVVSREAILR------FGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYR 167

Query: 159 WVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY----- 211
           W+ N  P +  P + R  V      + I     SD GNY C AT+ + +  K V+     
Sbjct: 168 WLLNEFP-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQ 226

Query: 212 VNVLAH-----APEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           +N+ A      AP I    P + Y + G+ V L C  FG P P + W      L+  ++T
Sbjct: 227 LNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-PQWT 285

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
             E   L+I  V+F D G Y C A N  G     G + V+          D E + G + 
Sbjct: 286 TAEP-TLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNL 344

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P  + ++ WLR  EP+  ++    +  +   L  +K S  DSG Y C A+ 
Sbjct: 345 RWGCAAAGKP--RPTVRWLRNGEPLASQNRVEVLAGD---LRFSKLSLEDSGMYQCVAEN 399

Query: 386 ELDFIEAQATLTVQV 400
           +   I A A L VQ 
Sbjct: 400 KHGTIYASAELAVQA 414



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 150/654 (22%), Positives = 237/654 (36%), Gaps = 75/654 (11%)

Query: 88  SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
           +L I     SD G+Y+C      + S     +K   ++L+     L AP      P    
Sbjct: 191 NLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDTRLFAPSIKARFPAETY 250

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + VT EC A G P P I W      +S     P+       + I ++   D G Y 
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-----PQWTTAEPTLQIPSVSFEDEGTYE 305

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V A  PE  +   D     G  +   C   G P+P V W+ N 
Sbjct: 306 CEAENSKGRDTVQGRIIVQAQ-PEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNG 364

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
           + L       +  GDL+ + ++  DSG Y C A NK GT   S  L V+         P 
Sbjct: 365 EPLASQNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPV 424

Query: 316 DYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
              + A  G      C   + P  K  ++W +G+E +   S  R   + D +L +   S 
Sbjct: 425 RRLIPAARGGEIVIPCQPRAAP--KAVVLWSKGTEILVNSS--RVTVTPDGTLIIRNISR 480

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APS--------NFTLIQVIDAKKAVV- 421
            D G+YTC A+  +    +   L+V+   +   APS        N TL Q   +    + 
Sbjct: 481 SDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTL-QCHASHDPTMD 539

Query: 422 ---SWN----PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
              +W     P+      GH+R   V+   E  G+ +I    +  G   T      V ++
Sbjct: 540 LTFTWTLDDFPIDFDKPGGHYRRTNVK---ETIGDLTILNAQLRHGGKYTCMAQTVVDSA 596

Query: 475 KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
              A VL                            +    +G +   L W +    +  +
Sbjct: 597 SKEATVLVRGPPG------------------PPGGVVVRDIGDTTIQLSWSRGFDNHSPI 638

Query: 535 MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
             Y ++ ++    K   +    P   +    +A++ GL P   Y   +      G G  S
Sbjct: 639 AKYTLQARTPPAGKWKQVRTN-PANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPS 697

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +     P   P  + G G  P  L+++WT M     N   F Y + +RR  +  
Sbjct: 698 GPSSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTH 757

Query: 649 AWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
            W    V        V +N+    + P+E+K+       DG  S+  L+ +  E
Sbjct: 758 -WQTARVPGADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTALVYSAEE 810



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 142/614 (23%), Positives = 227/614 (36%), Gaps = 84/614 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P+   +R+        L    +   D G Y C   N  G   
Sbjct: 348 CAAAGKPRPTVRWLRNGEPLASQNRVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTIY 405

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F + P    I AA    +   C+    P+  + W    + +  +  
Sbjct: 406 A-SAELAVQALAPDFRLNPVRRLIPAARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSS- 463

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V P+  + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 464 --RVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 520

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G  + L C     P  ++ +     +        GG Y    + ET GDL I +    
Sbjct: 521 NLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLR 580

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS---------------- 324
             G+YTC A+  + +A  S   TV               + G +                
Sbjct: 581 HGGKYTCMAQTVVDSA--SKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPI 638

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQ 378
           A +   A + P+ K   V    + P + E      Q        DY   V  S+ L +G+
Sbjct: 639 AKYTLQARTPPAGKWKQV---RTNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGE 695

Query: 379 YTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGY 438
            +    +++   EA  ++                     + +V+W P+S +   G   GY
Sbjct: 696 PSG-PSSKIRTREAAPSVAPSG--------LSGGGGAPGELIVNWTPMSREYQNGDGFGY 746

Query: 439 KVQ-------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            +         W      G+  +  V   ES    V  + P      ++ ++N   +GP 
Sbjct: 747 LLSFRRQGSTHWQTARVPGADAQYFVYSNES----VRPYTPFE---VKIRSYNRRGDGPE 799

Query: 492 SEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKGTKV 549
           S      + E  P    + + A  + SS   + W   +Q  NG+L+GY+I+Y      + 
Sbjct: 800 SLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGILLGYEIRYWKAGDKEA 859

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVE 609
                R   +     TSA+++GL P+TKY + +  Y +AG G  S        K P    
Sbjct: 860 AADRVRTAGLD----TSARVSGLHPNTKYHVTVRAYNRAGTGPASPSANATTMKPPPR-- 913

Query: 610 GRGSTPNNLVISWT 623
                P N  ISWT
Sbjct: 914 ---RPPGN--ISWT 922



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 114/300 (38%), Gaps = 34/300 (11%)

Query: 125 APYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P F  +P    F   + EE V   C+A   P     W  NG  +   P +  + VG N 
Sbjct: 36  GPVFEDQPLSVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNL 95

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTC 240
           + +   +  D G Y C A+N +G V     +       E ++  +D   T +G  V+L C
Sbjct: 96  VIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKTHEGWGVMLPC 155

Query: 241 RVFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGT 295
                 P     W+ N+      T GR+ + + TG+L I     +D G Y+C A + +  
Sbjct: 156 NPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDF 215

Query: 296 AQGSGSLTVKEHTHITDQPEDYEVEA---------------GQSATFRCNAVSDPSLKLS 340
           +  S      +   +    ED  + A               GQ  T  C A  +P  +  
Sbjct: 216 STKS---VFSKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPR-- 270

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +    +D    P++  + + +L +   S  D G Y C A+        Q  + VQ 
Sbjct: 271 IKWRK----VDGSLSPQWTTA-EPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQA 325


>gi|444727034|gb|ELW67542.1| Neural cell adhesion molecule L1-like protein [Tupaia chinensis]
          Length = 1138

 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 138/507 (27%), Positives = 228/507 (44%), Gaps = 17/507 (3%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L+   + L C   G P PQ  W+K G  + P +R ++ N G  L I++V + D+G+Y C 
Sbjct: 244 LKGNTLLLECFAEGLPTPQVDWNKMGGAL-PKERETEKNDGNILKIENVSYQDKGNYRCT 302

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
            SN +G A ++   ++V   P++T +P+    +   +    C+A G P+P I W  NG P
Sbjct: 303 ASNFLGTA-THDFHVTVEEPPHWTKKPQSGVYSTGSSGILLCEAEGEPQPTIKWRVNGSP 361

Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEA 224
           I   P      V P  I+  NL+ + T  Y C A+N  G +  +  ++V+   P I TE 
Sbjct: 362 IDNHP-FAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQTED 420

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
            ++  TV G +  L C  F +P+  V+W  +   K L G RY I   G L+I      D+
Sbjct: 421 EENYATVLGYSAFLHCEYFASPEAIVSWQKVDEAKPLEGRRYHIHGNGTLQINRTTEEDA 480

Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
           G Y+C+  N +G    + +L ++  T +   P++  V         C +  D  LK  L 
Sbjct: 481 GSYSCWVENAIGKTAVTANLDIRNATELRVSPKNPRVPKSHMLELHCESKCDSHLKHSLK 540

Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           + W +  E  +   +E   +  +  +LT++  +  D G YTC AQT LD I     +TV 
Sbjct: 541 LSWSKDGEAFEINGTEDGRIMIDGANLTISNITLEDQGIYTCLAQTALDSIADITQVTVL 600

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
              + P N  L +  + +   ++W   +      +   Y V+    ++  G   EL   +
Sbjct: 601 DVPDPPENLHLSERQN-RSVRLTWE--AGDDHNSNISEYIVEFEGNREEPGRWEELSRVQ 657

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
           G+ TT  V    P  +   RV+A N      PS       TP   P    Q++       
Sbjct: 658 GKDTTV-VLALAPYVRYQFRVIAVNEVGRSQPSHPSDHHETPPAAPDKNPQNIRVQASQP 716

Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQ 542
               +KW  +K  + NG  + Y++ ++
Sbjct: 717 KEMIIKWEPLKSMEQNGPGLEYRVTWK 743



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 167/722 (23%), Positives = 277/722 (38%), Gaps = 89/722 (12%)

Query: 54  FCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113
           +C F   P  +TI  K  +P+              L +  ++ ++  S + E+ +     
Sbjct: 177 YCCFAAFPRLRTIVQK--MPM-------------KLTVNSLKHANDSSSSTEIDSKANSI 221

Query: 114 KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
           K     L  L  P  +     I   +  T+  EC A GLP P++ W   G     A P  
Sbjct: 222 KQRKPRL--LLPPTESGRESSITILKGNTLLLECFAEGLPTPQVDWNKMGG----ALPKE 275

Query: 174 R--RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
           R   K   N + IEN+   D GNY C A+N LG    D +V V    P  T+ P+     
Sbjct: 276 RETEKNDGNILKIENVSYQDKGNYRCTASNFLGTATHDFHVTV-EEPPHWTKKPQSGVYS 334

Query: 232 DGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCFA 289
            G + +L C   G P+P + W  N   +    +   ++   ++  T++    +  Y C A
Sbjct: 335 TGSSGILLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTAVYQCEA 394

Query: 290 RNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS 347
            N  GT   + ++ V +   +  T+  E+Y    G SA   C   + P   +S  W +  
Sbjct: 395 SNVHGTILANANIDVVDVRPLIQTEDEENYATVLGYSAFLHCEYFASPEAIVS--WQKVD 452

Query: 348 EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSN 407
           E    E     +  N  +L + +++E D+G Y+C  +  +      A L ++       N
Sbjct: 453 EAKPLEGRRYHIHGNG-TLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR-------N 504

Query: 408 FTLIQVIDAKKAVVSWNPVSPQS----------LRGHFRGYKVQTWTEKDGEGSIRELIV 457
            T ++V          NP  P+S             H +     +W+ KDGE       +
Sbjct: 505 ATELRVSPK-------NPRVPKSHMLELHCESKCDSHLKHSLKLSWS-KDGEA----FEI 552

Query: 458 NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI------ISFVTPEGVPGTVQSLE 511
           N  E     +D       N    L   G Y             I+ VT   VP   ++L 
Sbjct: 553 NGTEDGRIMIDGANLTISNI--TLEDQGIYTCLAQTALDSIADITQVTVLDVPDPPENLH 610

Query: 512 AIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGP-LLERLPYISDPTTTSAKLA 570
                + +  L W   +  N  +  Y ++++   G +  P   E L  +    TT   + 
Sbjct: 611 LSERQNRSVRLTWEAGDDHNSNISEYIVEFE---GNREEPGRWEELSRVQGKDTTV--VL 665

Query: 571 GLEPSTKYRIHLAGYTKAGDGAESKYLFY------VPFKNPDNVEGRGSTPNNLVISWTA 624
            L P  +Y+  +    + G    S    +       P KNP N+  + S P  ++I W  
Sbjct: 666 ALAPYVRYQFRVIAVNEVGRSQPSHPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEP 725

Query: 625 MPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTE 684
           +  +E N P  +YR+ W+       W ++ V +     L +     + PY+++ +  W  
Sbjct: 726 LKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTN---HTLRVMTPTVYAPYDVQ-LNWWKT 781

Query: 685 K---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTP 739
           K   DG    +E+ + +  G+     V      S+    VLA+N    GP SE   F TP
Sbjct: 782 KSLLDGRTHPKEVNILRFSGQRNYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTP 841

Query: 740 EG 741
           EG
Sbjct: 842 EG 843



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 178/460 (38%), Gaps = 78/460 (16%)

Query: 52  ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
           ++ C   G P P   W+KD  P + SD   I+  N G   I      S  QG Y C  SN
Sbjct: 36  QIECEAKGNPEPTFRWTKDDKPFDLSDPRIITSNNSGTFKIPNEGHISHFQGKYRCLASN 95

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHW--VHNGK 164
            +G A S  I+  V + P F  E  + +   E + +   C    GLP   I+W  +  G 
Sbjct: 96  KLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIDEGV 155

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-----NSLGYVYKDVYVNVLAHA 218
            +SQ             +   N+ + D+ N Y C A        +  +   + VN L HA
Sbjct: 156 YMSQK----------GDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHA 205

Query: 219 --------------------PEITEAPKDE------YTVDGKTVVLTCRVFGAPKPEVNW 252
                               P +   P +         + G T++L C   G P P+V+W
Sbjct: 206 NDSSSSTEIDSKANSIKQRKPRLLLPPTESGRESSITILKGNTLLLECFAEGLPTPQVDW 265

Query: 253 IHNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT 311
                 L   R T    G+ LKI +V++ D G Y C A N LGTA     +TV+E  H T
Sbjct: 266 NKMGGALPKERETEKNDGNILKIENVSYQDKGNYRCTASNFLGTATHDFHVTVEEPPHWT 325

Query: 312 DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID---------FESEPRF--VQ 360
            +P+      G S    C A  +P  + +I W     PID         F  E  F  +Q
Sbjct: 326 KKPQSGVYSTGSSGILLCEAEGEP--QPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQ 383

Query: 361 SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVID 415
            N  ++   ++S +     T  A   +D ++ +  +  +       +   S F   +   
Sbjct: 384 PNHTAVYQCEASNVHG---TILANANIDVVDVRPLIQTEDEENYATVLGYSAFLHCEYFA 440

Query: 416 AKKAVVSWNPVSP----QSLRGHFRG---YKVQTWTEKDG 448
           + +A+VSW  V      +  R H  G    ++   TE+D 
Sbjct: 441 SPEAIVSWQKVDEAKPLEGRRYHIHGNGTLQINRTTEEDA 480



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 140/612 (22%), Positives = 237/612 (38%), Gaps = 94/612 (15%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
           L C   G P P   W  +G PI+         + + +   +++ +    Y CE SN  G 
Sbjct: 341 LLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGT 400

Query: 113 -AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
              + +ID+  +     T + E        +    C+    PE  + W    + + +A P
Sbjct: 401 ILANANIDVVDVRPLIQTEDEENYATVLGYSAFLHCEYFASPEAIVSW----QKVDEAKP 456

Query: 172 NPRRKV---GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
              R+    G   + I    + D G+Y C   N++G       +++  +A E+  +PK+ 
Sbjct: 457 LEGRRYHIHGNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDI-RNATELRVSPKNP 515

Query: 229 YTVDGKTVVLTCRVFGAPKPEVNWIHNQK----------ELTG---GRYTILETGDLKIT 275
                  + L C      K + +  H+ K          E+ G   GR  +++  +L I+
Sbjct: 516 RVPKSHMLELHCE----SKCDSHLKHSLKLSWSKDGEAFEINGTEDGR-IMIDGANLTIS 570

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVS 333
           ++   D G YTC A+  L +      +TV +   + D PE+  +   Q+ + R    A  
Sbjct: 571 NITLEDQGIYTCLAQTALDSIADITQVTVLD---VPDPPENLHLSERQNRSVRLTWEAGD 627

Query: 334 DPSLKLS--IVWLRGS--EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
           D +  +S  IV   G+  EP  +E   R VQ  D ++ +  +  +   +Y  R     + 
Sbjct: 628 DHNSNISEYIVEFEGNREEPGRWEELSR-VQGKDTTVVLALAPYV---RYQFRVIAVNEV 683

Query: 390 IEAQATLTVQ-------VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT 442
             +Q +            P + P N   +Q    K+ ++ W P+      G    Y+V T
Sbjct: 684 GRSQPSHPSDHHETPPAAPDKNPQNIR-VQASQPKEMIIKWEPLKSMEQNGPGLEYRV-T 741

Query: 443 WTEKDGEGSIRELIVNK----------------------------GESTTTEVD------ 468
           W  +       E  V                              G +   EV+      
Sbjct: 742 WKPQGAPVEWEEETVTNHTLRVMTPTVYAPYDVQLNWWKTKSLLDGRTHPKEVNILRFSG 801

Query: 469 ----KFVPASKNFAR----VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
                 VP+   F+     VLA+N    GP SE   F TPEGVP     L+ I +     
Sbjct: 802 QRNYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTPEGVPEQPTFLKVINIDKDTA 861

Query: 521 YLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLEPSTKYR 579
            L W  P++ NG L GY ++YQ +  T ++G L +    I+ P   + +L+ L  +TKY+
Sbjct: 862 TLSWGLPKKLNGNLTGYLLQYQIINDTYEIGELNDI--NITTPWKPTWRLSNLNATTKYK 919

Query: 580 IHLAGYTKAGDG 591
            +L   T  G G
Sbjct: 920 FYLRACTSKGCG 931



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 114/307 (37%), Gaps = 50/307 (16%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPN--PRRKVGPNRITIENLRKSDTGNYGC 197
           +E    EC+A G PEP   W  + KP   + P        G  +I  E       G Y C
Sbjct: 32  DEYFQIECEAKGNPEPTFRWTKDDKPFDLSDPRIITSNNSGTFKIPNEGHISHFQGKYRC 91

Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN 255
            A+N LG    +    ++   P+  +   D   V +G  +VL C    G P   + W++ 
Sbjct: 92  LASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMN- 150

Query: 256 QKELTGGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTHIT 311
              +  G Y + + GDL   +V   DS  +Y CFA   R +    +    LTV    H  
Sbjct: 151 ---IDEGVY-MSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHAN 206

Query: 312 DQPEDYEVEA-----------------------------GQSATFRCNAVSDPSLKLSIV 342
           D     E+++                             G +    C A   P+ ++   
Sbjct: 207 DSSSSTEIDSKANSIKQRKPRLLLPPTESGRESSITILKGNTLLLECFAEGLPTPQVDWN 266

Query: 343 WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPL 402
            + G+ P + E+E    +++   L +   S  D G Y C A   L      AT    V +
Sbjct: 267 KMGGALPKERETE----KNDGNILKIENVSYQDKGNYRCTASNFL----GTATHDFHVTV 318

Query: 403 EAPSNFT 409
           E P ++T
Sbjct: 319 EEPPHWT 325


>gi|348578147|ref|XP_003474845.1| PREDICTED: contactin-2-like [Cavia porcellus]
          Length = 1041

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 159/605 (26%), Positives = 257/605 (42%), Gaps = 49/605 (8%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P   W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 252 ALVGQQVTLECFAFGNPVPMIKWRKVDGSLSPQWATAE----PTLQIPSVSFEDEGTYEC 307

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEE------ETVTFECKASGLPEPEIH 158
           E  N  G         +V        +PE++    +        + + C A+G P P + 
Sbjct: 308 EAENSKGRD-------TVQGRIIVQAQPEWLKVISDTEADIGANLRWGCAAAGKPRPTVR 360

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P++      R +V    +    L   D+G Y C A N  G +Y    + V A A
Sbjct: 361 WLRNGEPLAS---QNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALA 417

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKIT 275
           P+  + P         G  + + C+   APK  V W    + L    R T+   G L I 
Sbjct: 418 PDFRQNPVRRLIPAARGGEISIACQPRAAPKATVLWSKGTEILVNSSRVTVTPGGTLIIR 477

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           +++ +D G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP
Sbjct: 478 NISRSDEGKYTCFAENFMGKANSTGVLSVRDATKITLAPSSADINLGDNLTLQCHASHDP 537

Query: 336 SLKLSIVWLRGSEPIDFES-----EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
           ++ L+  W     PI+F+          V+     L +  +     G+YTC AQT +D  
Sbjct: 538 TMDLTFTWTLDDFPINFDKPGGHYRRASVKETVGDLMILNAQLRHGGKYTCMAQTVVDSA 597

Query: 391 EAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDG 448
             +AT+ V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G
Sbjct: 598 SKEATVLVRGPPGPPGGVVVRDISDT-TVQLSWS----RGFDNHSPIAKYTLQARTPPAG 652

Query: 449 E-GSIRELIVN-KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
           +   +R    N +G + T +V    P      RVLA N    G PS   S + T E VP 
Sbjct: 653 KWKQVRTNPANIEGNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSRIRTKEAVPS 712

Query: 506 TVQSLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
              S  +   G+     + W  +  E  NG   GY + ++  +    G    R+P  +D 
Sbjct: 713 VAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFR--RQGSSGWQTARVPG-ADA 769

Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGSTPNN 617
                    ++P T + + +  Y + GDG ES   + Y     P   P  V  +G + + 
Sbjct: 770 QYFVYSNESIQPYTPFEVKIRSYNQRGDGPESLTAIVYSAEEEPRVAPAKVWAKGVSSSE 829

Query: 618 LVISW 622
           + ++W
Sbjct: 830 MNVTW 834



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 148/368 (40%), Gaps = 26/368 (7%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           ++V L C    +P     W  +G  + + P  R  Q   G  +II   +  D G Y C  
Sbjct: 56  EQVTLACRARASPPATYRWKMNGTEMKLEPDSR-HQLVGGNLVIINPTKAQDAGVYQCLA 114

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVHNGK 164
           SN VG   S    L       F+ E  + + A E   V   C   +  P     W+ N  
Sbjct: 115 SNPVGTVVSREAVLRFGFLQEFSKEERDPVKAHEGWGVMLPCNPPAHYPGLSYRWLLNEF 174

Query: 165 PISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVY-----VNVLAH 217
           P +  P + R  V      + I     SD GNY C AT+ + +  K V+     +N+ A 
Sbjct: 175 P-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAE 233

Query: 218 APEI------TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD 271
            P +         P + Y + G+ V L C  FG P P + W      L+    T   T  
Sbjct: 234 DPRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPMIKWRKVDGSLSPQWATAEPT-- 291

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
           L+I  V+F D G Y C A N  G     G + V+          D E + G +  + C A
Sbjct: 292 LQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGANLRWGCAA 351

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
              P  + ++ WLR  EP+  ++    +  +   L  +K S  DSG Y C A+ +   I 
Sbjct: 352 AGKP--RPTVRWLRNGEPLASQNRVEVLAGD---LRFSKLSLEDSGMYQCVAENKHGTIY 406

Query: 392 AQATLTVQ 399
           A A L VQ
Sbjct: 407 ASAELAVQ 414



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 141/639 (22%), Positives = 241/639 (37%), Gaps = 85/639 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P+   +R+        L    +   D G Y C   N  G   
Sbjct: 349 CAAAGKPRPTVRWLRNGEPLASQNRVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTIY 406

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F   P    I AA    ++  C+    P+  + W    + +  +  
Sbjct: 407 A-SAELAVQALAPDFRQNPVRRLIPAARGGEISIACQPRAAPKATVLWSKGTEILVNSS- 464

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V P   + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 465 --RVTVTPGGTLIIRNISRSDEGKYTCFAENFMGKANSTGVLSV-RDATKITLAPSSADI 521

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G  + L C     P  ++ +     +        GG Y   ++ ET GDL I +    
Sbjct: 522 NLGDNLTLQCHASHDPTMDLTFTWTLDDFPINFDKPGGHYRRASVKETVGDLMILNAQLR 581

Query: 281 DSGEYTCFARNKLGTAQGSGSL---------TVKEHTHITDQPEDYEVEAGQS-----AT 326
             G+YTC A+  + +A    ++                I+D         G       A 
Sbjct: 582 HGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRDISDTTVQLSWSRGFDNHSPIAK 641

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQYT 380
           +   A + P+ K   V    + P + E      Q        DY   V  S+ L +G+ +
Sbjct: 642 YTLQARTPPAGKWKQV---RTNPANIEGNAETAQVLGLTPWMDYEFRVLASNILGTGEPS 698

Query: 381 ---CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRG 437
               R +T+      +A  +V     +       ++I      V+W P+S +   G   G
Sbjct: 699 GPSSRIRTK------EAVPSVAPSGLSGGGGAPGELI------VNWTPMSREYQNGDGFG 746

Query: 438 YKVQ-------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGP 490
           Y +         W      G+  +  V   ES    +  + P      ++ ++N   +GP
Sbjct: 747 YLLSFRRQGSSGWQTARVPGADAQYFVYSNES----IQPYTPFE---VKIRSYNQRGDGP 799

Query: 491 PSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKGTK 548
            S      + E  P    + + A  + SS   + W   +Q  NG+L+GY+I+Y      +
Sbjct: 800 ESLTAIVYSAEEEPRVAPAKVWAKGVSSSEMNVTWEPVQQDVNGILLGYEIRYWKAGDKE 859

Query: 549 VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-----KYLFYVPFK 603
                 R   +     T A +  L+P+TKY + +  Y +AG G  S       +   P +
Sbjct: 860 AAADRVRTAGLE----TVACVTSLQPNTKYHVTVRAYNRAGTGPASPSTNATTMKPPPRR 915

Query: 604 NPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
            P N+    S+ ++L I W  +  + + +    Y++ ++
Sbjct: 916 PPSNISWTFSS-SSLTIQWDPVVALRNESAVTGYKMLYQ 953



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 114/301 (37%), Gaps = 30/301 (9%)

Query: 121 SVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
           S    P F  +P    F   + EE VT  C+A   P     W  NG  +   P +  + V
Sbjct: 33  SATFGPVFEDQPLGLLFPEESTEEQVTLACRARASPPATYRWKMNGTEMKLEPDSRHQLV 92

Query: 178 GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTV 236
           G N + I   +  D G Y C A+N +G V     V       E ++  +D     +G  V
Sbjct: 93  GGNLVIINPTKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVKAHEGWGV 152

Query: 237 VLTCRVFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARN 291
           +L C      P     W+ N+      T GR+ + + TG+L I     +D G Y+C A +
Sbjct: 153 MLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS 212

Query: 292 KLGTAQGSGSLTVKEHTHITDQP-------------EDYEVEAGQSATFRCNAVSDPSLK 338
            +  +  S      +     + P             E Y +  GQ  T  C A  +P   
Sbjct: 213 HMDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPAETYAL-VGQQVTLECFAFGNPVPM 271

Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             I W +    +D    P++  + + +L +   S  D G Y C A+        Q  + V
Sbjct: 272 --IKWRK----VDGSLSPQWATA-EPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIV 324

Query: 399 Q 399
           Q
Sbjct: 325 Q 325


>gi|395516502|ref|XP_003762426.1| PREDICTED: neural cell adhesion molecule L1-like protein
           [Sarcophilus harrisii]
          Length = 1266

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 181/714 (25%), Positives = 285/714 (39%), Gaps = 83/714 (11%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
           L C   G P PQ  W K G  + P  R  + N+GK+L I+ V   D+G Y C   N  G 
Sbjct: 278 LECFAEGLPTPQITWMKVGEDL-PKGREERENFGKTLKIEQVTHMDKGHYRCMAKNYKGT 336

Query: 113 AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPN 172
           A ++   ++V   P +T +PE    +        C+A G P PEI W  NG P+++    
Sbjct: 337 A-THEFRVTVEEPPRWTKKPESAVYSIGSNGILLCEAEGEPAPEIEWKINGLPVNKHSL- 394

Query: 173 PRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE--YT 230
           P     P  I+  N++ + TG Y C ATN  G +     +NVL  +P + + P DE    
Sbjct: 395 PGIVFFPGEISFNNIQLNHTGVYQCEATNVHGKILATANINVLDISP-LMQTPDDEGYAA 453

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
           V G +  L C VF +P   + W    K   L G  YT  + G L+I      D+G YTC+
Sbjct: 454 VVGYSAYLFCDVFASPPAVITWQKPSKVERLEGPHYTTHQNGTLEIKKTTKEDAGPYTCW 513

Query: 289 ARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LSIVWLRG 346
            ++  G    +  L +++ T++T  P +  V         C    D  LK  L + W + 
Sbjct: 514 VKSPRGEVAVTAHLAIRDATNLTISPLNPHVIKSHLLVLHCEIECDSHLKHSLKLSWSKD 573

Query: 347 SEPIDF---ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE 403
            E ++    E   R     D  LT++  +  D G Y+C   T LD   A   + +    +
Sbjct: 574 EEALEANGTEDISRITIDGD-KLTISNVTLEDEGSYSCHVNTALDGAVATTQVIILDVPD 632

Query: 404 APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGEST 463
            P N  + +  + +   ++W   +  S       + ++    KD  G   EL   +G  T
Sbjct: 633 PPENLHISERQN-RSVRLTWE--AGDSHNSIITEFIIEFEGNKDEPGKWAELTKIQGNET 689

Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF-----VTPEGVPGTVQSLEAIPLGSS 518
           T  +    P  K   RV+  N      PS+   +       P+  P  ++   + P    
Sbjct: 690 TALLS-LAPYVKYQFRVIGVNAVGRSLPSDPSDYHETPPAAPDKNPDNIKVEASQP---K 745

Query: 519 AFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY-ISDPTTTSAKLAGLEPS 575
             ++KW  +K  + NG  + Y++ ++           + +P   SD   T   L  +  S
Sbjct: 746 EMFIKWEPLKSMERNGPGLEYRVSWRQ----------QGVPSEWSDELATDNTLRVMTSS 795

Query: 576 --TKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNLVISWTAMPEI 628
             T Y + +    + G G E + +        P   P +V         + ++W  +P+ 
Sbjct: 796 VFTPYDVKVQAINQLGSGPEPQTITVYSGEDYPDAAPSSVSASVINSTLINVTWDRIPK- 854

Query: 629 EHNAPHFK-YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDG 687
           E    H + Y+I W        W     LD R+            P EIK ++       
Sbjct: 855 ERVHGHLRGYQINW--------WKTKSRLDERKF-----------PKEIKTLRL------ 889

Query: 688 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
                      G+ +   V    P S+    VLA+N    GP S  ISF TPEG
Sbjct: 890 ----------AGDRSYGMVPSLDPFSEFKLTVLAYNSKGAGPESTPISFQTPEG 933



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 130/570 (22%), Positives = 224/570 (39%), Gaps = 73/570 (12%)

Query: 142 TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATN 201
           T+  EC A GLP P+I W+  G+ + +      R+     + IE +   D G+Y C A N
Sbjct: 275 TLLLECFAEGLPTPQITWMKVGEDLPKG--REERENFGKTLKIEQVTHMDKGHYRCMAKN 332

Query: 202 SLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN-----Q 256
             G    +  V V    P  T+ P+      G   +L C   G P PE+ W  N     +
Sbjct: 333 YKGTATHEFRVTV-EEPPRWTKKPESAVYSIGSNGILLCEAEGEPAPEIEWKINGLPVNK 391

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
             L G    +   G++   ++    +G Y C A N  G    + ++ V + + +   P+D
Sbjct: 392 HSLPG---IVFFPGEISFNNIQLNHTGVYQCEATNVHGKILATANINVLDISPLMQTPDD 448

Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
             Y    G SA   C+  + P     I W + S+    E  P +    + +L + K+++ 
Sbjct: 449 EGYAAVVGYSAYLFCDVFASPPA--VITWQKPSKVERLEG-PHYTTHQNGTLEIKKTTKE 505

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
           D+G YTC  ++       +  +T  + +   +N T+             +P++P  ++ H
Sbjct: 506 DAGPYTCWVKSP----RGEVAVTAHLAIRDATNLTI-------------SPLNPHVIKSH 548

Query: 435 FRGYKVQ-------------TWT------EKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
                 +             +W+      E +G   I  + ++  + T + V      S 
Sbjct: 549 LLVLHCEIECDSHLKHSLKLSWSKDEEALEANGTEDISRITIDGDKLTISNVTLEDEGSY 608

Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
           +     A +GA       I+       VP   ++L      + +  L W   +  N ++ 
Sbjct: 609 SCHVNTALDGAVATTQVIILD------VPDPPENLHISERQNRSVRLTWEAGDSHNSIIT 662

Query: 536 GYKIKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
            + I+++   G K  P     L  I    TT+  L  L P  KY+  + G    G    S
Sbjct: 663 EFIIEFE---GNKDEPGKWAELTKIQGNETTA--LLSLAPYVKYQFRVIGVNAVGRSLPS 717

Query: 595 KYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
               Y       P KNPDN++   S P  + I W  +  +E N P  +YR+ WR+     
Sbjct: 718 DPSDYHETPPAAPDKNPDNIKVEASQPKEMFIKWEPLKSMERNGPGLEYRVSWRQQGVPS 777

Query: 649 AWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
            W+ +   D   + L +     F PY++KV
Sbjct: 778 EWSDELATD---NTLRVMTSSVFTPYDVKV 804



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 138/591 (23%), Positives = 232/591 (39%), Gaps = 82/591 (13%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPINPS--DRISQGNY----GKSLIIKHVEFSDQGSYTCEV 106
            LFC    +P     W K      PS  +R+   +Y      +L IK     D G YTC V
Sbjct: 461  LFCDVFASPPAVITWQK------PSKVERLEGPHYTTHQNGTLEIKKTTKEDAGPYTCWV 514

Query: 107  SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK-- 164
             +  GE  + +  L++  A   T+ P   +  +   +   C+     E + H  H+ K  
Sbjct: 515  KSPRGEV-AVTAHLAIRDATNLTISPLNPHVIKSHLLVLHCEI----ECDSHLKHSLKLS 569

Query: 165  --------PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
                      +      R  +  +++TI N+   D G+Y C+   +L        V +L 
Sbjct: 570  WSKDEEALEANGTEDISRITIDGDKLTISNVTLEDEGSYSCHVNTALDGAVATTQVIIL- 628

Query: 217  HAPEITEAPKDEYTVD--GKTVVLTCRV--------------FGAPKPEVNWIHNQKELT 260
               ++ + P++ +  +   ++V LT                 F   K E        ++ 
Sbjct: 629  ---DVPDPPENLHISERQNRSVRLTWEAGDSHNSIITEFIIEFEGNKDEPGKWAELTKIQ 685

Query: 261  GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYE 318
            G   T L         +A     ++     N +G +  S      E         P++ +
Sbjct: 686  GNETTAL-------LSLAPYVKYQFRVIGVNAVGRSLPSDPSDYHETPPAAPDKNPDNIK 738

Query: 319  VEAGQSAT-------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKS 371
            VEA Q           +    + P L+  + W +   P ++  E     + D +L V  S
Sbjct: 739  VEASQPKEMFIKWEPLKSMERNGPGLEYRVSWRQQGVPSEWSDE----LATDNTLRVMTS 794

Query: 372  SELDSGQYTCRAQTELDFIEAQATLTV----QVPLEAPSNFTLIQVIDAKKAVVSWNPVS 427
            S         +A  +L       T+TV      P  APS+ +   VI++    V+W+ + 
Sbjct: 795  SVFTPYDVKVQAINQLGSGPEPQTITVYSGEDYPDAAPSSVS-ASVINSTLINVTWDRIP 853

Query: 428  PQSLRGHFRGYKVQTWT------EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 481
             + + GH RGY++  W       E+     I+ L +  G+ +   V    P S+    VL
Sbjct: 854  KERVHGHLRGYQINWWKTKSRLDERKFPKEIKTLRL-AGDRSYGMVPSLDPFSEFKLTVL 912

Query: 482  AFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY 541
            A+N    GP S  ISF TPEGVP     L+ I        L W  P++ +G L GY ++Y
Sbjct: 913  AYNSKGAGPESTPISFQTPEGVPEQPTFLKVINADKDTVVLSWGLPKKAHGNLTGYNLQY 972

Query: 542  QSVKGT-KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            Q +  T ++G L E    +++P+  S ++  L  +TKY+ +L   T  G G
Sbjct: 973  QIINDTDEIGELKEI--NVTNPSKLSWRVPDLNSTTKYKFYLRACTSKGCG 1021



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 135/362 (37%), Gaps = 58/362 (16%)

Query: 94  VEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAE--EETVTFECKASG 151
           ++ S +G   C +   +    +  I +SV   P    E   +  A   +E   F C+A G
Sbjct: 3   MQLSRRGYVRCLLFFMLKLTAAIEIPISVKQVPTIITEQSTVQVAFPFDEYFQFVCEAKG 62

Query: 152 LPEPEIHWVHNGKPISQAPPNPR----RKVGPNRITIENLRKSDTGNYGCNATNSLGYVY 207
            PEP  HW  N +  S    +PR       G  +I  E       G Y C A+N LG   
Sbjct: 63  NPEPTFHWTKNEEHFSLL-SDPRIISSNNTGTFKILNEGHITHFQGKYRCFASNELGTAM 121

Query: 208 KDVYVNVLAHAPEITEAPKDEY----TVDGKTVVLTCR-VFGAPKPEVNW--IHNQKELT 260
            +    ++   P I + PK++       +G ++VL C    G P   + W  I  Q    
Sbjct: 122 SEEIDFIV---PSIPKFPKEKIEPLEVEEGNSIVLHCNPPKGIPPLHIYWMNIDLQHIPQ 178

Query: 261 GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTHITD---- 312
             R  + + GDL   +V   DS  +Y CFA   R +    +    LTV    H  D    
Sbjct: 179 DERVYMSQKGDLYFANVEENDSRSDYCCFAAFPRLRTIVQKMPMKLTVNSLKHANDSSSH 238

Query: 313 -------------QPE------------DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS 347
                        QP                +  G +    C A   P+ +  I W++  
Sbjct: 239 RQNITKANSIKQRQPRMLLPPETSGSHSSVTIIKGGTLLLECFAEGLPTPQ--ITWMKVG 296

Query: 348 EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSN 407
           E +    E R  ++   +L + + + +D G Y C A+      +  AT   +V +E P  
Sbjct: 297 EDLPKGREER--ENFGKTLKIEQVTHMDKGHYRCMAKN----YKGTATHEFRVTVEEPPR 350

Query: 408 FT 409
           +T
Sbjct: 351 WT 352


>gi|1095168|prf||2107324A neural adhesion molecule F3
          Length = 1021

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 157/581 (27%), Positives = 245/581 (42%), Gaps = 42/581 (7%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K    +  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 241 PADIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEPMPTTAEISTS--GAVLKIF 298

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 299 NIQLEDEGLYECEAENIRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 354

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 355 TGKPIPTIRWLKNGYAYHKG------ELRLYDVTFEN-----AGMYQCIAENAYGTIYAN 403

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 404 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 463

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L +   T I   P + ++  G++AT
Sbjct: 464 WEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITNPTRIILAPINADITVGENAT 523

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-------PRFVQSNDYSLTVTKSSELDSGQY 379
            +C A  DPSL L+ VW      IDF  E         F+   +  L +  +    +G+Y
Sbjct: 524 MQCAASFDPSLDLTFVWSFNGYVIDFNKEITNIHYQRNFMLDANGELLIRNAQLKHAGRY 583

Query: 380 TCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYK 439
           TC AQT +D   A A L V+ P   P     I+ I A    ++W+  S          Y 
Sbjct: 584 TCTAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYT 640

Query: 440 VQTWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
           +QT T    D + +  +  + +G   + +    +P  +   RV+A N    G PS   + 
Sbjct: 641 IQTKTILSDDWKDAKTDPPIIEGNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSNR 700

Query: 498 VTPEGVPGTVQSLEAIPLGSS--AFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
           +  +G    V   +    G +     + W  +  E   G   GY + ++   G +   + 
Sbjct: 701 IKTDGAAPNVAPSDVGGGGGTNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT 760

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
              P   D      K   + PST +++ +  +   GDG  S
Sbjct: 761 VTNP---DTGRYVHKDETMTPSTAFQVKVKAFNNKGDGPYS 798



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 150/646 (23%), Positives = 243/646 (37%), Gaps = 61/646 (9%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 189 VSQTN--GNLYIANVESSDRGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVV 246

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  I     + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 247 QFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEPM---PTTAEISTSGAVLKIFNIQLE 303

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N  G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 304 DEGLYECEAENIRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 362

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  GT   +  L +      
Sbjct: 363 RWLKN-----GYAY---HKGELRLYDVTFENAGMYQCIAENAYGTIYANAELKILALAPT 414

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   D SL 
Sbjct: 415 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 470

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC A+       +  TL +  P   + AP N  +    +A  +   S+
Sbjct: 471 INNITRNDGGIYTCFAENNRGKANSTGTLVITNPTRIILAPINADITVGENATMQCAASF 530

Query: 424 NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAF 483
           +P    +    F GY +    E       R  +++          +   A +        
Sbjct: 531 DPSLDLTFVWSFNGYVIDFNKEITNIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTI 590

Query: 484 NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQS 543
               +     ++           ++ + A     ++  L W +    +  +  Y I+ ++
Sbjct: 591 VDNSSASADLVVRGPPGPPGGLRIEDIRA-----TSVALTWSRGSDNHSPISKYTIQTKT 645

Query: 544 V-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES---- 594
           +     K  K  P     P I +    SAK   L P  +Y   +      G G  S    
Sbjct: 646 ILSDDWKDAKTDP-----PII-EGNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSN 699

Query: 595 --KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
             K     P   P +V G G T   L I+W  +    H   +F Y + ++  + GE W +
Sbjct: 700 RIKTDGAAPNVAPSDVGGGGGTNRELTITWAPLSREYHYGNNFGYIVAFKPFD-GEEWKK 758

Query: 653 DDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
             V +      V  ++ T  P   +++KV     + DG  S+  +I
Sbjct: 759 VTVTNPDTGRYVHKDE-TMTPSTAFQVKVKAFNNKGDGPYSLIAVI 803



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 142/374 (37%), Gaps = 50/374 (13%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   ++  +DR S    G +L+I + +   D G Y C  S
Sbjct: 60  KVSLNCRARASPFPVYKWRMNNGDVDLTNDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 117

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVE--PEFINAAEEETVTFECKASGLPEPEIH------- 158
           N  G  +S    LS      F  E  PE +   E + +   C      +P  H       
Sbjct: 118 NNYGMVRSTEATLSFGYLDPFPPEDRPE-VKVKEGKGMVLLC------DPPYHFPDDLSY 170

Query: 159 -WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV- 214
            W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+    
Sbjct: 171 RWLLNEFPVFIT-MDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSP--SITKSVFSKFI 227

Query: 215 -LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRY 264
            L   PE T  P         KD YT+ G+ V L C   G P P++ W    + +     
Sbjct: 228 PLIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEPMPTTAE 287

Query: 265 TILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
                  LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G  
Sbjct: 288 ISTSGAVLKIFNIQLEDEGLYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSD 347

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             + C A   P    +I WL+       + E R      Y +T       ++G Y C A+
Sbjct: 348 LYWPCVATGKPI--PTIRWLKNGYAY-HKGELRL-----YDVTFE-----NAGMYQCIAE 394

Query: 385 TELDFIEAQATLTV 398
                I A A L +
Sbjct: 395 NAYGTIYANAELKI 408



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 111/292 (38%), Gaps = 28/292 (9%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPR-RKVGPNRITI 184
           P  T+ PE    + +  V+  C+A   P P   W  N   +     N R   VG N +  
Sbjct: 47  PINTIYPE---ESLDGKVSLNCRARASPFPVYKWRMNNGDVDLT--NDRYSMVGGNLVIN 101

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV- 242
              ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   
Sbjct: 102 NPDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEDRPEVKVKEGKGMVLLCDPP 161

Query: 243 FGAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQ 297
           +  P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T  
Sbjct: 162 YHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSPSITKS 221

Query: 298 GSGSLT----VKEHT------HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS 347
                     + E T       I  Q +D     GQ+ T  C A+ +P     I W +  
Sbjct: 222 VFSKFIPLIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNPV--PDIRWRKVL 279

Query: 348 EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           EP+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 280 EPMPTTAE---ISTSGAVLKIFNIQLEDEGLYECEAENIRGKDKHQARIYVQ 328



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+    ++V+ + +  V W  V    L      Y+++ W   D E +   + V   
Sbjct: 810 PSEAPTEVG-VKVLSSSEISVHWKHV----LEKIVESYQIRYWAGHDKEAAAHRVQVTSQ 864

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GP S++I   T +  P     + +     S +
Sbjct: 865 E-YSARLENLLPDTQYFIEVGACNSAGCGPSSDVIETFTRKAPPSQPPRIISSVRSGSRY 923

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYKI Y+
Sbjct: 924 IITWDHVVALSNESTVTGYKILYR 947


>gi|16923964|ref|NP_476459.1| contactin-1 precursor [Rattus norvegicus]
 gi|17432928|sp|Q63198.2|CNTN1_RAT RecName: Full=Contactin-1; AltName: Full=Neural cell surface
           protein F3; Flags: Precursor
 gi|1498194|dbj|BAA07504.1| F3 [Rattus norvegicus]
 gi|149017608|gb|EDL76612.1| contactin 1 [Rattus norvegicus]
          Length = 1021

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 157/581 (27%), Positives = 245/581 (42%), Gaps = 42/581 (7%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K    +  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 241 PADIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEPMPTTAEISTS--GAVLKIF 298

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 299 NIQLEDEGLYECEAENIRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 354

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 355 TGKPIPTIRWLKNGYAYHKG------ELRLYDVTFEN-----AGMYQCIAENAYGTIYAN 403

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 404 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 463

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L +   T I   P + ++  G++AT
Sbjct: 464 WEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITNPTRIILAPINADITVGENAT 523

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-------PRFVQSNDYSLTVTKSSELDSGQY 379
            +C A  DPSL L+ VW      IDF  E         F+   +  L +  +    +G+Y
Sbjct: 524 MQCAASFDPSLDLTFVWSFNGYVIDFNKEITNIHYQRNFMLDANGELLIRNAQLKHAGRY 583

Query: 380 TCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYK 439
           TC AQT +D   A A L V+ P   P     I+ I A    ++W+  S          Y 
Sbjct: 584 TCTAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYT 640

Query: 440 VQTWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
           +QT T    D + +  +  + +G   + +    +P  +   RV+A N    G PS   + 
Sbjct: 641 IQTKTILSDDWKDAKTDPPIIEGNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSNR 700

Query: 498 VTPEGVPGTVQSLEAIPLGSS--AFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
           +  +G    V   +    G +     + W  +  E   G   GY + ++   G +   + 
Sbjct: 701 IKTDGAAPNVAPSDVGGGGGTNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT 760

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
              P   D      K   + PST +++ +  +   GDG  S
Sbjct: 761 VTNP---DTGRYVHKDETMTPSTAFQVKVKAFNNKGDGPYS 798



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 150/646 (23%), Positives = 243/646 (37%), Gaps = 61/646 (9%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 189 VSQTN--GNLYIANVESSDRGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVV 246

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  I     + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 247 QFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEPM---PTTAEISTSGAVLKIFNIQLE 303

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N  G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 304 DEGLYECEAENIRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 362

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  GT   +  L +      
Sbjct: 363 RWLKN-----GYAY---HKGELRLYDVTFENAGMYQCIAENAYGTIYANAELKILALAPT 414

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   D SL 
Sbjct: 415 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 470

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC A+       +  TL +  P   + AP N  +    +A  +   S+
Sbjct: 471 INNITRNDGGIYTCFAENNRGKANSTGTLVITNPTRIILAPINADITVGENATMQCAASF 530

Query: 424 NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAF 483
           +P    +    F GY +    E       R  +++          +   A +        
Sbjct: 531 DPSLDLTFVWSFNGYVIDFNKEITNIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTI 590

Query: 484 NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQS 543
               +     ++           ++ + A     ++  L W +    +  +  Y I+ ++
Sbjct: 591 VDNSSASADLVVRGPPGPPGGLRIEDIRA-----TSVALTWSRGSDNHSPISKYTIQTKT 645

Query: 544 V-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES---- 594
           +     K  K  P     P I +    SAK   L P  +Y   +      G G  S    
Sbjct: 646 ILSDDWKDAKTDP-----PII-EGNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSN 699

Query: 595 --KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
             K     P   P +V G G T   L I+W  +    H   +F Y + ++  + GE W +
Sbjct: 700 RIKTDGAAPNVAPSDVGGGGGTNRELTITWAPLSREYHYGNNFGYIVAFKPFD-GEEWKK 758

Query: 653 DDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
             V +      V  ++ T  P   +++KV     + DG  S+  +I
Sbjct: 759 VTVTNPDTGRYVHKDE-TMTPSTAFQVKVKAFNNKGDGPYSLIAVI 803



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 142/374 (37%), Gaps = 50/374 (13%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   ++  +DR S    G +L+I + +   D G Y C  S
Sbjct: 60  KVSLNCRARASPFPVYKWRMNNGDVDLTNDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 117

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVE--PEFINAAEEETVTFECKASGLPEPEIH------- 158
           N  G  +S    LS      F  E  PE +   E + +   C      +P  H       
Sbjct: 118 NNYGMVRSTEATLSFGYLDPFPPEDRPE-VKVKEGKGMVLLC------DPPYHFPDDLSY 170

Query: 159 -WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV- 214
            W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+    
Sbjct: 171 RWLLNEFPVFIT-MDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSP--SITKSVFSKFI 227

Query: 215 -LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRY 264
            L   PE T  P         KD YT+ G+ V L C   G P P++ W    + +     
Sbjct: 228 PLIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEPMPTTAE 287

Query: 265 TILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
                  LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G  
Sbjct: 288 ISTSGAVLKIFNIQLEDEGLYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSD 347

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
             + C A   P    +I WL+       + E R      Y +T       ++G Y C A+
Sbjct: 348 LYWPCVATGKPI--PTIRWLKNGYAY-HKGELRL-----YDVTFE-----NAGMYQCIAE 394

Query: 385 TELDFIEAQATLTV 398
                I A A L +
Sbjct: 395 NAYGTIYANAELKI 408



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 111/292 (38%), Gaps = 28/292 (9%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPR-RKVGPNRITI 184
           P  T+ PE    + E  V+  C+A   P P   W  N   +     N R   VG N +  
Sbjct: 47  PINTIYPE---ESLEGKVSLNCRARASPFPVYKWRMNNGDVDLT--NDRYSMVGGNLVIN 101

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV- 242
              ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   
Sbjct: 102 NPDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEDRPEVKVKEGKGMVLLCDPP 161

Query: 243 FGAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQ 297
           +  P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T  
Sbjct: 162 YHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSPSITKS 221

Query: 298 GSGSLT----VKEHT------HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS 347
                     + E T       I  Q +D     GQ+ T  C A+ +P     I W +  
Sbjct: 222 VFSKFIPLIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNPV--PDIRWRKVL 279

Query: 348 EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           EP+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 280 EPMPTTAE---ISTSGAVLKIFNIQLEDEGLYECEAENIRGKDKHQARIYVQ 328



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+    ++V+ + +  V W  V    L      Y+++ W   D E +   + V   
Sbjct: 810 PSEAPTEVG-VKVLSSSEISVHWKHV----LEKIVESYQIRYWAGHDKEAAAHRVQVTSQ 864

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GP S++I   T +  P     + +     S +
Sbjct: 865 E-YSARLENLLPDTQYFIEVGACNSAGCGPSSDVIETFTRKAPPSQPPRIISSVRSGSRY 923

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYKI Y+
Sbjct: 924 IITWDHVVALSNESTVTGYKILYR 947


>gi|363732364|ref|XP_419931.3| PREDICTED: peroxidasin homolog [Gallus gallus]
          Length = 1479

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 178/360 (49%), Gaps = 17/360 (4%)

Query: 51  VELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           V   C   G P P+ IW ++   + +    R++  + G +L+I++ + +DQG Y C   N
Sbjct: 262 VYFTCRAEGNPKPEIIWLRNNNELIMKEDSRLNLLDDG-TLMIQNTQETDQGIYQCMAKN 320

Query: 109 GVGEAKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             GE K+  + L      A P F + P+       E+VT EC A+G P+P+I W    + 
Sbjct: 321 VAGEVKTQEVTLRYFGSPARPSFVIHPQNTEVLVGESVTLECSATGHPQPQITWTKGDR- 379

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            +  P +PR  + P+  + I+N+++ D+G Y C ATNS+G ++   Y+ V A  P+ T  
Sbjct: 380 -TPLPSDPRITITPSGGLYIQNVKQEDSGEYTCFATNSIGNIHATAYIIVQA-LPQFTVT 437

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSG 283
           P+D+  ++G+TV   C   G P+P + W     +L+   R+ +L +G L+I+ VA  D G
Sbjct: 438 PQDKTVIEGQTVDFPCEAQGYPQPVIAWTKGGGQLSVDRRHLVLSSGTLRISRVALHDQG 497

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +Y C A N +G+ +    LTV+          P D  VE G +    C+A  +P  +  I
Sbjct: 498 QYECQAVNIIGSQRIVVYLTVQPRVTPVFASVPSDMTVEVGTNVQIPCSAQGEP--EPVI 555

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            W    + +      +F  S +  LT+      D G+Y C A+  + +      L+V VP
Sbjct: 556 TW--NKDGVQVTESGKFHVSPEGYLTIRDVGTADEGRYECVARNTIGYSSVSMVLSVNVP 613



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 131/499 (26%), Positives = 203/499 (40%), Gaps = 63/499 (12%)

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAA--PYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           Q + TCE    +      +I    L    P  T EP+ ++     TV F C+A G P+PE
Sbjct: 216 QAAATCEYPRRIQGRSVATITPEELNCERPRITSEPQDVDVTSGNTVYFTCRAEGNPKPE 275

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV-YKDVYVNVL 215
           I W+ N   +     +    +    + I+N +++D G Y C A N  G V  ++V +   
Sbjct: 276 IIWLRNNNELIMKEDSRLNLLDDGTLMIQNTQETDQGIYQCMAKNVAGEVKTQEVTLRYF 335

Query: 216 AH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL--TGGRYTILETGD 271
                P     P++   + G++V L C   G P+P++ W    +    +  R TI  +G 
Sbjct: 336 GSPARPSFVIHPQNTEVLVGESVTLECSATGHPQPQITWTKGDRTPLPSDPRITITPSGG 395

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
           L I +V   DSGEYTCFA N +G    +  + V+     T  P+D  V  GQ+  F C A
Sbjct: 396 LYIQNVKQEDSGEYTCFATNSIGNIHATAYIIVQALPQFTVTPQDKTVIEGQTVDFPCEA 455

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
              P  +  I W +G   +  +     + S   +L +++ +  D GQY C+A   +    
Sbjct: 456 QGYP--QPVIAWTKGGGQLSVDRRHLVLSSG--TLRISRVALHDQGQYECQAVNIIGSQR 511

Query: 392 AQATLTVQ-----VPLEAPSNFTL-----IQVIDAKKA----VVSWNP------------ 425
               LTVQ     V    PS+ T+     +Q+  + +     V++WN             
Sbjct: 512 IVVYLTVQPRVTPVFASVPSDMTVEVGTNVQIPCSAQGEPEPVITWNKDGVQVTESGKFH 571

Query: 426 VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNG 485
           VSP+   G+     V T  E   E   R  I     S    V+  VP           N 
Sbjct: 572 VSPE---GYLTIRDVGTADEGRYECVARNTIGYSSVSMVLSVN--VP-----------NV 615

Query: 486 AYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ--S 543
           + NG P     FV    V        AI   S+  +L   +P  PN +L  ++      +
Sbjct: 616 SRNGDP-----FVQTSIVEAIATVDRAI--NSTRTHLFDSRPRSPNDLLALFRYPRDPYT 668

Query: 544 VKGTKVGPLLER-LPYISD 561
           V+  + G + ER L  I D
Sbjct: 669 VEQARAGEIFERTLQLIQD 687



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/265 (34%), Positives = 122/265 (46%), Gaps = 11/265 (4%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
            L  + V L C   G P PQ  W+K D  P+    RI+    G  L I++V+  D G YT
Sbjct: 352 VLVGESVTLECSATGHPQPQITWTKGDRTPLPSDPRITITPSG-GLYIQNVKQEDSGEYT 410

Query: 104 CEVSNGVG--EAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVH 161
           C  +N +G   A +Y I   V A P FTV P+     E +TV F C+A G P+P I W  
Sbjct: 411 CFATNSIGNIHATAYII---VQALPQFTVTPQDKTVIEGQTVDFPCEAQGYPQPVIAWTK 467

Query: 162 NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA-PE 220
            G  +S    +     G  RI+   L   D G Y C A N +G     VY+ V     P 
Sbjct: 468 GGGQLSVDRRHLVLSSGTLRISRVALH--DQGQYECQAVNIIGSQRIVVYLTVQPRVTPV 525

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
               P D     G  V + C   G P+P + W  +  ++T  G++ +   G L I DV  
Sbjct: 526 FASVPSDMTVEVGTNVQIPCSAQGEPEPVITWNKDGVQVTESGKFHVSPEGYLTIRDVGT 585

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTV 304
           AD G Y C ARN +G +  S  L+V
Sbjct: 586 ADEGRYECVARNTIGYSSVSMVLSV 610



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 14/181 (7%)

Query: 31  HAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR---ISQGNYGK 87
            A  Q  VT + +  +  + V+  C   G P P   W+K G  ++   R   +S G    
Sbjct: 429 QALPQFTVTPQDKTVIEGQTVDFPCEAQGYPQPVIAWTKGGGQLSVDRRHLVLSSG---- 484

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSV--LAAPYFTVEPEFINAAEEETVTF 145
           +L I  V   DQG Y C+  N +G ++   + L+V     P F   P  +       V  
Sbjct: 485 TLRISRVALHDQGQYECQAVNIIG-SQRIVVYLTVQPRVTPVFASVPSDMTVEVGTNVQI 543

Query: 146 ECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLG 204
            C A G PEP I W  +G  ++++    +  V P   +TI ++  +D G Y C A N++G
Sbjct: 544 PCSAQGEPEPVITWNKDGVQVTES---GKFHVSPEGYLTIRDVGTADEGRYECVARNTIG 600

Query: 205 Y 205
           Y
Sbjct: 601 Y 601


>gi|432116103|gb|ELK37230.1| Contactin-2 [Myotis davidii]
          Length = 962

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 163/629 (25%), Positives = 266/629 (42%), Gaps = 61/629 (9%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G    +  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 177 ALLGQQVTLECFAFG----KIKWRKVDGSLSPQWATAE----PTLQIPSVSFEDEGTYEC 228

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           E  N  G   S    + V A P +      + A    ++ + C A+G P P + W+ NG+
Sbjct: 229 EAENSKGR-DSVQGRIIVQAQPEWLKVISDMEADIGSSLRWGCAAAGKPRPTVRWLRNGE 287

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           P++      R +V    +    L   D+G Y C A N  G +Y    + V A AP+    
Sbjct: 288 PLAS---QTRVEVLAGDLRFSKLSLDDSGMYQCVAENKHGTIYASAELAVQALAPDFRLN 344

Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           P         G  V++ C+   APK  V W    + L    R T+   G L I +++ +D
Sbjct: 345 PVRRLIPAARGGEVMIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSD 404

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP+++L+ 
Sbjct: 405 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMELTF 464

Query: 342 VWLRGSEPIDFE---SEPRFVQSNDY--SLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
           +W     PID +      R   + +    LT+  +     G+YTC AQT +D    +AT+
Sbjct: 465 IWALDDFPIDPDKPGGHYRRASAKETVGDLTILNAQLRHGGKYTCMAQTVVDSASKEATV 524

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GSIR 453
            V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G+   +R
Sbjct: 525 LVRGPPGPPGGMVVRDIGDT-TVQLSWS----RGFDNHSPIAKYTLQARTPPAGKWKQVR 579

Query: 454 ELIVN-KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA 512
               N +G + T +V    P      RV+A N         I+    P G    +++ EA
Sbjct: 580 TNPANIEGNAETAQVLGLTPWMDYEFRVIASN---------ILGTGEPSGPSSKIRTKEA 630

Query: 513 IPL-----------GSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
            P                  + W  +  E  NG   GY + ++  +    G    R+P  
Sbjct: 631 APFVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFR--RQGSAGWQSARVPG- 687

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGST 614
           +D          + P T + + +  Y + GDG ES   L Y     P   P  V  +G +
Sbjct: 688 ADAQFFVYSNESIRPYTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVS 747

Query: 615 PNNLVISWTAMPEIEHNAPHFKYRI-FWR 642
            + + ++W A+P+ + N     Y I +W+
Sbjct: 748 SSEMNVTWEAVPQ-DTNGVLLGYEIRYWK 775



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 143/617 (23%), Positives = 224/617 (36%), Gaps = 90/617 (14%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P+    R+        L    +   D G Y C   N  G   
Sbjct: 270 CAAAGKPRPTVRWLRNGEPLASQTRVEV--LAGDLRFSKLSLDDSGMYQCVAENKHGTIY 327

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F + P    I AA    V   C+    P+  + W    + +  +  
Sbjct: 328 A-SAELAVQALAPDFRLNPVRRLIPAARGGEVMIPCQPRAAPKAVVLWSKGTEILVNSS- 385

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V P+  + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 386 --RVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 442

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G  + L C     P  E+ +I    +        GG Y   +  ET GDL I +    
Sbjct: 443 NLGDNLTLQCHASHDPTMELTFIWALDDFPIDPDKPGGHYRRASAKETVGDLTILNAQLR 502

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHT-----HITDQPEDYEVEAGQS---------AT 326
             G+YTC A+  + +A    ++ V+         +     D  V+   S         A 
Sbjct: 503 HGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGMVVRDIGDTTVQLSWSRGFDNHSPIAK 562

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQYT 380
           +   A + P+ K   V    + P + E      Q        DY   V  S+ L +G+ +
Sbjct: 563 YTLQARTPPAGKWKQV---RTNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPS 619

Query: 381 -----CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
                 R +    F+                           + +V+W P+S +   G  
Sbjct: 620 GPSSKIRTKEAAPFVAPSGLSGGGG--------------APGELIVNWTPMSREYQNGDG 665

Query: 436 RGYKVQ-------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
            GY +         W      G+  +  V   ES         P +    ++ ++N   +
Sbjct: 666 FGYLLSFRRQGSAGWQSARVPGADAQFFVYSNES-------IRPYTPFEVKIRSYNRRGD 718

Query: 489 GPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW-VKPEQPNGVLMGYKIKYQSVKG 546
           GP S      + E  P    + + A  + SS   + W   P+  NGVL+GY+I+Y     
Sbjct: 719 GPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEAVPQDTNGVLLGYEIRYWKAGD 778

Query: 547 TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPD 606
            +      R   +     T+A++  L P+TKY + +  Y +AG G  S        K P 
Sbjct: 779 KEAAADRVRTAGLD----TTARVTDLHPNTKYHVTVRAYNRAGTGPASPSANATTMKPPP 834

Query: 607 NVEGRGSTPNNLVISWT 623
                   P N  ISWT
Sbjct: 835 R-----RPPGN--ISWT 844



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 131/329 (39%), Gaps = 27/329 (8%)

Query: 86  GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVT 144
           G  +I+   +  D G Y C  SN VG   S    L       F+ E  + + A     V 
Sbjct: 19  GNLVIMSPTKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVKAHAGWGVM 78

Query: 145 FECK-ASGLPEPEIHWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATN 201
             C   +  P     W+ N  P +  P + R  V      + I     SD GNY C AT+
Sbjct: 79  LPCNPPAHYPGLSYRWLLNEFP-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS 137

Query: 202 SLGYVYKDVY-----VNVLAHAPEI------TEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
            + +  K V+     +N+ A  P +         P + Y + G+ V L C  FG    ++
Sbjct: 138 HMDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPAETYALLGQQVTLECFAFG----KI 193

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W      L+    T   T  L+I  V+F D G Y C A N  G     G + V+     
Sbjct: 194 KWRKVDGSLSPQWATAEPT--LQIPSVSFEDEGTYECEAENSKGRDSVQGRIIVQAQPEW 251

Query: 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTK 370
                D E + G S  + C A   P  + ++ WLR  EP+  ++    +  +   L  +K
Sbjct: 252 LKVISDMEADIGSSLRWGCAAAGKP--RPTVRWLRNGEPLASQTRVEVLAGD---LRFSK 306

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            S  DSG Y C A+ +   I A A L VQ
Sbjct: 307 LSLDDSGMYQCVAENKHGTIYASAELAVQ 335



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 152/655 (23%), Positives = 241/655 (36%), Gaps = 81/655 (12%)

Query: 88  SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
           +L I     SD G+Y+C      + S     +K   ++L+     L AP      P    
Sbjct: 117 NLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPAETY 176

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + VT EC A G    +I W      +S     P+       + I ++   D G Y 
Sbjct: 177 ALLGQQVTLECFAFG----KIKWRKVDGSLS-----PQWATAEPTLQIPSVSFEDEGTYE 227

Query: 197 CNATNSLGYVYKDVYVNVLAHA-PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
           C A NS G     V   ++  A PE  +   D     G ++   C   G P+P V W+ N
Sbjct: 228 CEAENSKGR--DSVQGRIIVQAQPEWLKVISDMEADIGSSLRWGCAAAGKPRPTVRWLRN 285

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQP 314
            + L       +  GDL+ + ++  DSG Y C A NK GT   S  L V+         P
Sbjct: 286 GEPLASQTRVEVLAGDLRFSKLSLDDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNP 345

Query: 315 EDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
               + A  G      C   + P  K  ++W +G+E +   S  R   + D +L +   S
Sbjct: 346 VRRLIPAARGGEVMIPCQPRAAP--KAVVLWSKGTEILVNSS--RVTVTPDGTLIIRNIS 401

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APS--------NFTLIQVIDAKKAVV 421
             D G+YTC A+  +    +   L+V+   +   APS        N TL Q   +    +
Sbjct: 402 RSDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTL-QCHASHDPTM 460

Query: 422 S----WN----PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPA 473
                W     P+ P    GH+R    +   E  G+ +I    +  G   T      V +
Sbjct: 461 ELTFIWALDDFPIDPDKPGGHYRRASAK---ETVGDLTILNAQLRHGGKYTCMAQTVVDS 517

Query: 474 SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV 533
           +   A VL                    G PG    +    +G +   L W +    +  
Sbjct: 518 ASKEATVLV------------------RGPPGPPGGMVVRDIGDTTVQLSWSRGFDNHSP 559

Query: 534 LMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
           +  Y ++ ++    K   +    P   +    +A++ GL P   Y   +      G G  
Sbjct: 560 IAKYTLQARTPPAGKWKQVRTN-PANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEP 618

Query: 594 S------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTG 647
           S      +     PF  P  + G G  P  L+++WT M     N   F Y + +RR  + 
Sbjct: 619 SGPSSKIRTKEAAPFVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSA 678

Query: 648 EAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
             W    V        V +N+    + P+E+K+       DG  S+  L+ +  E
Sbjct: 679 -GWQSARVPGADAQFFVYSNESIRPYTPFEVKIRSYNRRGDGPESLTALVYSAEE 732



 Score = 43.9 bits (102), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 95/257 (36%), Gaps = 31/257 (12%)

Query: 162 NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           NG  +   P +  + VG N + +   +  D G Y C A+N +G V     V       E 
Sbjct: 2   NGTEMKLEPGSRHQLVGGNLVIMSPTKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEF 61

Query: 222 TEAPKDEYTVD-GKTVVLTCRVFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKIT 275
           ++  +D      G  V+L C      P     W+ N+      T GR+ + + TG+L I 
Sbjct: 62  SKEERDPVKAHAGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIA 121

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------------EDYEVEAG 322
               +D G Y+C A + +  +  S      +     + P             E Y +  G
Sbjct: 122 RTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPAETYAL-LG 180

Query: 323 QSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCR 382
           Q  T  C A         I W +    +D    P++  + + +L +   S  D G Y C 
Sbjct: 181 QQVTLECFAFG------KIKWRK----VDGSLSPQWATA-EPTLQIPSVSFEDEGTYECE 229

Query: 383 AQTELDFIEAQATLTVQ 399
           A+        Q  + VQ
Sbjct: 230 AENSKGRDSVQGRIIVQ 246


>gi|395824571|ref|XP_003785536.1| PREDICTED: contactin-6 [Otolemur garnettii]
          Length = 1029

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 180/715 (25%), Positives = 298/715 (41%), Gaps = 76/715 (10%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    + S+      L I + +  D+G Y 
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQ--AILEIPNFQQEDEGFYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G   +    L   A P +  + +    +  +++ +ECKASG P P   W  NG
Sbjct: 297 CIAGNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDSLLWECKASGKPNPWYMWFKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++   P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 356 ERLN---PEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSK 412

Query: 224 AP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT-ILETGDLKITDVAFA 280
            P  K+     G  +V+ C+    P+  ++W    + L   R   +LE G LKI +V  +
Sbjct: 413 TPIKKNSVVQVGGNIVIECKPNAFPRAAISWKRGAENLRQSRRVFLLEDGSLKIYNVTRS 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D G YTC A N+ G A+ +GSL VKE T IT  P   +V  G+S    C    DP++++ 
Sbjct: 473 DGGSYTCIATNQFGIAKNTGSLIVKERTVITVPPSRMDVTVGESIVLPCQVSHDPTIEVI 532

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            VW    + ID +       R    +   L +       SG+Y C  QT L+ + A A +
Sbjct: 533 FVWSFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADI 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   +  I +  + +SW P  P +     + + +QT T          ++
Sbjct: 593 IVRGPPGPPEDVK-VDHISSTTSQLSWRP-GPNN-NSPIQIFTIQTRTPFSVGWQAVATV 649

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA 512
            E++   G++    V    P  +   RV+A N    G PS+    +  +     V  +  
Sbjct: 650 PEIL--SGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVNI 707

Query: 513 IPLGS--SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
              G   S   + W  +  E  NG   GY + ++ V  T      E++  + + +    +
Sbjct: 708 NGGGGSRSELVITWESIPEELQNGEGFGYVVMFRPVGSTTWNK--EKVASV-ESSRFVYR 764

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESKY-LFYV----PFKNPDNVEGRGSTPNNLVISWT 623
              + P + + + +  Y   G+GA S   + Y     P   P  +  +  + + + +SW 
Sbjct: 765 NESIIPLSPFEVKVGVYNNEGEGALSTVSIVYSGEDEPQLAPRKISVQSFSASEMEVSWN 824

Query: 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWT 683
           A+                       AWN       R +  VL        YE   V  WT
Sbjct: 825 AI-----------------------AWN-------RNTGRVLG-------YE---VLYWT 844

Query: 684 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           +   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S  ++  T
Sbjct: 845 DDARESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGTGPSSPPVNVTT 898



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 161/674 (23%), Positives = 254/674 (37%), Gaps = 115/674 (17%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC ++N   EA+      SV   P   V+                
Sbjct: 180 NLYIAKVEPSDVGNYTCFITN--KEAQR-----SVQGPPTPLVQRADGVMGEYEPKIEVR 232

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ +V  EC A G P P+I W   +G P+   P   +       + I N ++
Sbjct: 233 FPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPL---PGKVKYSKSQAILEIPNFQQ 289

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A N  G       + +    PE  +  ++ Y     +++  C+  G P P 
Sbjct: 290 EDEGFYECIAGNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDSLLWECKASGKPNPW 348

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W  N + L       +E G L IT +  +DSG Y C A NK      +  L V     
Sbjct: 349 YMWFKNGERLNPEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAP 408

Query: 309 HITDQP--EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P  ++  V+ G +    C   + P  + +I W RG+E  +     R     D SL
Sbjct: 409 DFSKTPIKKNSVVQVGGNIVIECKPNAFP--RAAISWKRGAE--NLRQSRRVFLLEDGSL 464

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ---------------------VPLEAP 405
            +   +  D G YTC A  +    +   +L V+                     +P +  
Sbjct: 465 KIYNVTRSDGGSYTCIATNQFGIAKNTGSLIVKERTVITVPPSRMDVTVGESIVLPCQVS 524

Query: 406 SNFTLI---------QVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
            + T+           VID KK V  +  +  +S+                G+  IR + 
Sbjct: 525 HDPTIEVIFVWSFNGDVIDLKKGVAHFERIGGESV----------------GDLMIRNIQ 568

Query: 457 VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLG 516
           +N        V   + +    A ++                    G PG  + ++   + 
Sbjct: 569 LNHSGKYLCTVQTTLESLSAVADIIV------------------RGPPGPPEDVKVDHIS 610

Query: 517 SSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPS 575
           S+   L W      N  +  + I  Q+     VG   +  +P I    T +A + GL P 
Sbjct: 611 STTSQLSWRPGPNNNSPIQIFTI--QTRTPFSVGWQAVATVPEILSGKTYNATVVGLSPW 668

Query: 576 TKYRIHLAGYTKAGDGAESK------YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIE 629
            +Y   +      G G  SK          VP   P N+ G G + + LVI+W ++PE  
Sbjct: 669 VEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVNINGGGGSRSELVITWESIPEEL 728

Query: 630 HNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDG 687
            N   F Y + +R   +   WN++ V     S  V  N+      P+E+KV       +G
Sbjct: 729 QNGEGFGYVVMFRPVGS-TTWNKEKVASVESSRFVYRNESIIPLSPFEVKV--GVYNNEG 785

Query: 688 EGSIREL-IVNKGE 700
           EG++  + IV  GE
Sbjct: 786 EGALSTVSIVYSGE 799



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 165/718 (22%), Positives = 280/718 (38%), Gaps = 93/718 (12%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P  +W K+G  +NP +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 339  CKASGKPNPWYMWFKNGERLNPEERIQIEN--GTLIITMLNVSDSGVYQCAAENKY-QII 395

Query: 115  SYSIDLSVLA-APYFTVEPEFINAAEE--ETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
              + +L VLA AP F+  P   N+  +    +  ECK +  P   I W    + + Q+  
Sbjct: 396  YANAELRVLASAPDFSKTPIKKNSVVQVGGNIVIECKPNAFPRAAISWKRGAENLRQS-- 453

Query: 172  NPRR--KVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
              RR   +    + I N+ +SD G+Y C ATN  G + K+    ++     IT  P    
Sbjct: 454  --RRVFLLEDGSLKIYNVTRSDGGSYTCIATNQFG-IAKNTGSLIVKERTVITVPPSRMD 510

Query: 230  TVDGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITD 276
               G+++VL C+V   P  EV   W  N             E  GG       GDL I +
Sbjct: 511  VTVGESIVLPCQVSHDPTIEVIFVWSFNGDVIDLKKGVAHFERIGGE----SVGDLMIRN 566

Query: 277  VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
            +    SG+Y C  +  L +      + V+        PED +V+   S T + +    P+
Sbjct: 567  IQLNHSGKYLCTVQTTLESLSAVADIIVRGPP---GPPEDVKVDHISSTTSQLSWRPGPN 623

Query: 337  ----LKLSIVWLRGSEPIDFE---SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
                +++  +  R    + ++   + P  +    Y+ TV   S     ++   A   +  
Sbjct: 624  NNSPIQIFTIQTRTPFSVGWQAVATVPEILSGKTYNATVVGLSPWVEYEFRVVAGNSIGI 683

Query: 390  IEAQA-----TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ--- 441
             E             VP+ AP N          + V++W  +  +   G   GY V    
Sbjct: 684  GEPSKPSELLRTKASVPVVAPVNINGGGG-SRSELVITWESIPEELQNGEGFGYVVMFRP 742

Query: 442  ----TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
                TW ++          V + ES        +P S    +V  +N    G  S +   
Sbjct: 743  VGSTTWNKEKVASVESSRFVYRNES-------IIPLSPFEVKVGVYNNEGEGALSTVSIV 795

Query: 498  VTPEGVPG------TVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKV 549
             + E  P       +VQS  A  +  S   + W    +  G ++GY++ Y     + + +
Sbjct: 796  YSGEDEPQLAPRKISVQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDARESMI 852

Query: 550  GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKN 604
            G +      +S   TT   + GL+ +T Y   +  Y  AG G  S  +        P + 
Sbjct: 853  GKI-----RVSGNVTTK-NITGLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQP 906

Query: 605  PDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR--RHNTGEAWNQDDVLDWRQSE 662
            P N+  +  T + L ++W  +  +E+ +    Y+I +R  RH+       ++      +E
Sbjct: 907  PANIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQNRHSKTHILETNNT----SAE 961

Query: 663  LVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 720
            L++   P  + Y I++       DG  S  E+ + K  S ++     + AS  F  ++
Sbjct: 962  LLV---PFEEDYLIEIRTVSDGGDGSSS-EEIRIPKMSSLSSRGIHVLEASTYFLSIV 1015



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 136/380 (35%), Gaps = 44/380 (11%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK--HVEFSDQGSYT 103
           L   ++ L C   G P P   W ++G  I+ S        G SL+I   H +  D G+Y 
Sbjct: 41  LSKSEIILNCAANGYPSPHYRWKQNGTDIDFSMSYHYRLDGGSLVISSPHTD-QDIGTYQ 99

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPEI----- 157
           C  +N +G   S    L       F T     ++  E + V   C     P P       
Sbjct: 100 CLATNLLGTVLSRKAKLQFAYIDDFETKTRSTVSVREGQGVVLLCG----PPPHFGDLSY 155

Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY---------- 205
            W  N  P+     N RR V      + I  +  SD GNY C  TN              
Sbjct: 156 AWTFNDNPLHVQEDN-RRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPPTPL 214

Query: 206 ------VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKE 258
                 V  +    +    PE  +A KD       +V L C   G P P+++W   +   
Sbjct: 215 VQRADGVMGEYEPKIEVRFPETIQAAKD------SSVKLECFALGNPVPDISWRRLDGSP 268

Query: 259 LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYE 318
           L G          L+I +    D G Y C A N  G     G L          + ++  
Sbjct: 269 LPGKVKYSKSQAILEIPNFQQEDEGFYECIAGNLRGRNLAKGQLIFYAPPEWEQKIQNTY 328

Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQ 378
           +    S  + C A   P+     +W +  E ++ E     +Q  + +L +T  +  DSG 
Sbjct: 329 LSIYDSLLWECKASGKPNPWY--MWFKNGERLNPEER---IQIENGTLIITMLNVSDSGV 383

Query: 379 YTCRAQTELDFIEAQATLTV 398
           Y C A+ +   I A A L V
Sbjct: 384 YQCAAENKYQIIYANAELRV 403



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 108/286 (37%), Gaps = 32/286 (11%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L+ P FT EPE   F     +  +   C A+G P P   W  NG  I  +     R  G
Sbjct: 22  LLSRPVFTQEPEDVIFPLDLSKSEIILNCAANGYPSPHYRWKQNGTDIDFSMSYHYRLDG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            + +        D G Y C ATN LG V         A+  +     +   +V +G+ VV
Sbjct: 82  GSLVISSPHTDQDIGTYQCLATNLLGTVLSRKAKLQFAYIDDFETKTRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        W  N   L       R+   ETG+L I  V  +D G YTCF
Sbjct: 142 LLC----GPPPHFGDLSYAWTFNDNPLHVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCF 197

Query: 289 ARNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSL 337
             NK    + QG  +  V+    +  +         PE  +     S    C A+ +P  
Sbjct: 198 ITNKEAQRSVQGPPTPLVQRADGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            +S   L GS       + ++ +S    L +    + D G Y C A
Sbjct: 258 DISWRRLDGSP---LPGKVKYSKSQAI-LEIPNFQQEDEGFYECIA 299


>gi|354489954|ref|XP_003507125.1| PREDICTED: contactin-6-like [Cricetulus griseus]
          Length = 1028

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 185/725 (25%), Positives = 301/725 (41%), Gaps = 96/725 (13%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHV-EF--SDQG 100
           A ++  V+L C   G P+P   W + DG P+       +  Y KS  I  + EF   D+G
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGNPMP-----GKVKYSKSQAILEIPEFHQEDEG 293

Query: 101 SYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV 160
            Y C   N  G   +    L   A P +  + +    +  +++ +ECKASG P P   W+
Sbjct: 294 YYECIAGNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDSLFWECKASGKPNPWYTWL 352

Query: 161 HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
            NG+ +    P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+
Sbjct: 353 KNGERLH---PEERIQIENGTLIITMLNVSDSGIYQCAAENKYQTIYANAELRVLASAPD 409

Query: 221 ITEAPKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDV 277
            ++ P  + +V   G  + + C+    PK  ++W    + L    R  +LE G LKI +V
Sbjct: 410 FSKNPIKKTSVVQVGGDISIECKPNAFPKASISWKRGTESLRQSKRVFLLEDGSLKICNV 469

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
             +D+G YTC A N+ G  + SGSL VKE T IT  P   +V  G+S    C    DP++
Sbjct: 470 TRSDAGSYTCVATNQFGNGKSSGSLIVKEKTVITTPPSKMDVTVGESIVLPCQVSHDPTM 529

Query: 338 KLSIVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393
           ++  VW    + ID +       R    +   L +       SG+Y C  QT L+ + A 
Sbjct: 530 EVVFVWYFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAV 589

Query: 394 ATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGE 449
           A + V+ P   P +   ++ I +  + +SW P  P +     + + +QT T         
Sbjct: 590 ADIIVRGPPGPPEDVK-VEHISSTTSQLSWRP-GPDN-NSPIQIFTIQTRTPFSVGWQAV 646

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE---------IISFVTP 500
            +I E++   G++    V    P  +   RV+A N    G PS+          +  V P
Sbjct: 647 TTIPEIL--NGQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASVPIVAP 704

Query: 501 EGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
             + G   S        S   + W  +  E  NG   GY + ++ V  T    + ER+  
Sbjct: 705 VNINGGGGS-------RSELVITWESIPEELQNGEGFGYIVMFRPVGSTTW--MKERVAL 755

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGST---- 614
           + + +    +   + P + + + +  Y   G+G+ S        ++   +  RG++    
Sbjct: 756 V-ESSRYIYRNESIMPLSPFEVKVGVYNNEGEGSLSTVSIVYSGEDEPQLAPRGTSVQSF 814

Query: 615 -PNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
             + + +SW A+                       AWN       R +  VL        
Sbjct: 815 SASEMEVSWNAI-----------------------AWN-------RNTGRVLG------- 837

Query: 674 YEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 733
           YE   V  WT+   E  I +  V+ G  TT  +      +  FA V A+N A  GP S  
Sbjct: 838 YE---VLYWTDNSKESMIGKSRVS-GNVTTKNITGLRANTIYFASVRAYNTAGTGPSSPP 893

Query: 734 ISFVT 738
           ++  T
Sbjct: 894 VNVTT 898



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 161/653 (24%), Positives = 255/653 (39%), Gaps = 73/653 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC V+N   EA       SV   P   V+                
Sbjct: 180 NLYIAKVEPSDVGNYTCFVTN--KEAHR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 232

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ +V  EC A G P P+I W   +G P+   P   +       + I    +
Sbjct: 233 FPETIQAAKDSSVKLECFALGNPVPDISWRRLDGNPM---PGKVKYSKSQAILEIPEFHQ 289

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A N  G       + +    PE  +  ++ Y     ++   C+  G P P 
Sbjct: 290 EDEGYYECIAGNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDSLFWECKASGKPNPW 348

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L       +E G L IT +  +DSG Y C A NK  T   +  L V     
Sbjct: 349 YTWLKNGERLHPEERIQIENGTLIITMLNVSDSGIYQCAAENKYQTIYANAELRVLASAP 408

Query: 309 HITDQP--EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P  +   V+ G   +  C   + P  K SI W RG+E        R     D SL
Sbjct: 409 DFSKNPIKKTSVVQVGGDISIECKPNAFP--KASISWKRGTE--SLRQSKRVFLLEDGSL 464

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV----VS 422
            +   +  D+G YTC A  +    ++  +L V+      +  + + V   +  V    VS
Sbjct: 465 KICNVTRSDAGSYTCVATNQFGNGKSSGSLIVKEKTVITTPPSKMDVTVGESIVLPCQVS 524

Query: 423 WNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 477
            +P        +F G  +         E+ G  S+ +L++   +       K++   +  
Sbjct: 525 HDPTMEVVFVWYFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQ--LGHSGKYLCTVQTT 582

Query: 478 ARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
              L+            ++ +   G PG  + ++   + S+   L W      N  +  +
Sbjct: 583 LERLS-----------AVADIIVRGPPGPPEDVKVEHISSTTSQLSWRPGPDNNSPIQIF 631

Query: 538 KIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK- 595
            I  Q+     VG   +  +P I +  T +A + GL P  +Y   +      G G  SK 
Sbjct: 632 TI--QTRTPFSVGWQAVTTIPEILNGQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKP 689

Query: 596 -----YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
                    VP   P N+ G G + + LVI+W ++PE   N   F Y + +R   +   W
Sbjct: 690 SELLRTKASVPIVAPVNINGGGGSRSELVITWESIPEELQNGEGFGYIVMFRPVGS-TTW 748

Query: 651 NQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
            ++ V     S  +  N+      P+E+KV       +GEGS+  + IV  GE
Sbjct: 749 MKERVALVESSRYIYRNESIMPLSPFEVKV--GVYNNEGEGSLSTVSIVYSGE 799



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 168/728 (23%), Positives = 280/728 (38%), Gaps = 88/728 (12%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G  ++P +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 339  CKASGKPNPWYTWLKNGERLHPEERIQIEN--GTLIITMLNVSDSGIYQCAAENKY-QTI 395

Query: 115  SYSIDLSVLA-APYFTVEPEFINAAEE--ETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
              + +L VLA AP F+  P    +  +    ++ ECK +  P+  I W    + + Q+  
Sbjct: 396  YANAELRVLASAPDFSKNPIKKTSVVQVGGDISIECKPNAFPKASISWKRGTESLRQSKR 455

Query: 172  NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
                + G  +I   N+ +SD G+Y C ATN  G   K     ++     IT  P      
Sbjct: 456  VFLLEDGSLKIC--NVTRSDAGSYTCVATNQFGN-GKSSGSLIVKEKTVITTPPSKMDVT 512

Query: 232  DGKTVVLTCRVFGAPKPEVN--WIHN-----------QKELTGGRYTILETGDLKITDVA 278
             G+++VL C+V   P  EV   W  N             E  GG       GDL I ++ 
Sbjct: 513  VGESIVLPCQVSHDPTMEVVFVWYFNGDVIDLKKGVAHFERIGGE----SVGDLMIRNIQ 568

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT----FRCNAVSD 334
               SG+Y C  +  L        + V+        PED +VE   S T    +R    ++
Sbjct: 569  LGHSGKYLCTVQTTLERLSAVADIIVRGPP---GPPEDVKVEHISSTTSQLSWRPGPDNN 625

Query: 335  PSLKLSIVWLRGSEPIDFESE---PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
              +++  +  R    + +++    P  +    Y+ TV   S     ++   A   +   E
Sbjct: 626  SPIQIFTIQTRTPFSVGWQAVTTIPEILNGQTYNATVVGLSPWVEYEFRVVAGNNIGIGE 685

Query: 392  AQA-----TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ----- 441
                         VP+ AP N          + V++W  +  +   G   GY V      
Sbjct: 686  PSKPSELLRTKASVPIVAPVNINGGGG-SRSELVITWESIPEELQNGEGFGYIVMFRPVG 744

Query: 442  --TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
              TW ++          + + ES        +P S    +V  +N    G  S +    +
Sbjct: 745  STTWMKERVALVESSRYIYRNES-------IMPLSPFEVKVGVYNNEGEGSLSTVSIVYS 797

Query: 500  PEGVP-----GT-VQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKVGP 551
             E  P     GT VQS  A  +  S   + W    +  G ++GY++ Y   + K + +G 
Sbjct: 798  GEDEPQLAPRGTSVQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDNSKESMIGK 854

Query: 552  LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPD 606
               R+        T+  + GL  +T Y   +  Y  AG G  S  +        P + P 
Sbjct: 855  --SRV----SGNVTTKNITGLRANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPA 908

Query: 607  NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR--RHNTGEAWNQDDVLDWRQSELV 664
            N+  + S  + L ++W  +  +E+ +    Y+I +R  R +T      ++      +EL+
Sbjct: 909  NIAWKLSN-SKLCLNWEHVKTMENESEVLGYKILYRQNRQSTAHILETNNT----SAELL 963

Query: 665  LANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNG 724
            +   P  + Y I++       DG  S    I      ++T V  F P+++  + V  F  
Sbjct: 964  V---PFEEDYLIEIRTVSDGGDGSSSEEIRIPKMSSLSSTGVQIFNPSTQFLSMVAIFYC 1020

Query: 725  AYNGPPSE 732
                PPS+
Sbjct: 1021 FAIQPPSQ 1028



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 136/379 (35%), Gaps = 42/379 (11%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS-DQGSYTC 104
           L   ++ L C   G P P   W ++G  I+ S        G +L I       D G+Y C
Sbjct: 41  LSRSEIILTCTANGYPSPHYRWKQNGTDIDFSMTYHYRLDGGNLAISSPRTDQDIGTYQC 100

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPEI-----H 158
            V+N VG   S    L       F T     ++  E +  T  C     P P        
Sbjct: 101 LVTNTVGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGGTVLCG----PPPHFGDLSYA 156

Query: 159 WVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------- 205
           W  N  P+     + RR V      + I  +  SD GNY C  TN   +           
Sbjct: 157 WTFNDNPL-YVQEDKRRFVSQVTGNLYIAKVEPSDVGNYTCFVTNKEAHRSVQGPPTPLV 215

Query: 206 -----VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT 260
                V  +    +    PE  +A KD       +V L C   G P P+++W        
Sbjct: 216 QRTDGVMGEYEPKIEVRFPETIQAAKD------SSVKLECFALGNPVPDISWRRLDGNPM 269

Query: 261 GGRYTILET-GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEV 319
            G+    ++   L+I +    D G Y C A N  G     G L          + ++  +
Sbjct: 270 PGKVKYSKSQAILEIPEFHQEDEGYYECIAGNLRGRNLAKGQLIFYAPPEWEQKIQNTYL 329

Query: 320 EAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQY 379
               S  + C A   P+   +  WL+  E +  E     +Q  + +L +T  +  DSG Y
Sbjct: 330 SIYDSLFWECKASGKPNPWYT--WLKNGERLHPEER---IQIENGTLIITMLNVSDSGIY 384

Query: 380 TCRAQTELDFIEAQATLTV 398
            C A+ +   I A A L V
Sbjct: 385 QCAAENKYQTIYANAELRV 403



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 102/287 (35%), Gaps = 36/287 (12%)

Query: 123 LAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGP 179
           L+ P F  EP+   F        +   C A+G P P   W  NG  I  +     R  G 
Sbjct: 23  LSRPIFIQEPQDVIFPLDLSRSEIILTCTANGYPSPHYRWKQNGTDIDFSMTYHYRLDGG 82

Query: 180 NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVL 238
           N          D G Y C  TN++G +         A+  +     +   +V +G+   +
Sbjct: 83  NLAISSPRTDQDIGTYQCLVTNTVGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGGTV 142

Query: 239 TCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCFA 289
            C     P P        W  N   L       R+    TG+L I  V  +D G YTCF 
Sbjct: 143 LC----GPPPHFGDLSYAWTFNDNPLYVQEDKRRFVSQVTGNLYIAKVEPSDVGNYTCFV 198

Query: 290 RNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSLK 338
            NK    + QG  +  V+    +  +         PE  +     S    C A+ +P   
Sbjct: 199 TNKEAHRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPD 258

Query: 339 LSIVWLRGSEPIDFESEPRFVQ--SNDYSLTVTKSSELDSGQYTCRA 383
           +S  W R    +D    P  V+   +   L + +  + D G Y C A
Sbjct: 259 IS--WRR----LDGNPMPGKVKYSKSQAILEIPEFHQEDEGYYECIA 299


>gi|4827022|ref|NP_005067.1| contactin-2 precursor [Homo sapiens]
 gi|399092|sp|Q02246.1|CNTN2_HUMAN RecName: Full=Contactin-2; AltName: Full=Axonal glycoprotein TAG-1;
           AltName: Full=Axonin-1; AltName: Full=Transient axonal
           glycoprotein 1; Short=TAX-1; Flags: Precursor
 gi|36675|emb|CAA48335.1| TAG-1/axonin-1 precursor [Homo sapiens]
 gi|871368|emb|CAA47963.1| transient axonal glycoprotein [Homo sapiens]
 gi|119611939|gb|EAW91533.1| contactin 2 (axonal), isoform CRA_a [Homo sapiens]
 gi|119611940|gb|EAW91534.1| contactin 2 (axonal), isoform CRA_a [Homo sapiens]
          Length = 1040

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 165/623 (26%), Positives = 266/623 (42%), Gaps = 45/623 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWTTAE----PTLQIPSVSFEDEGTYEC 306

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           E  N  G   +    + V A P +        A     + + C A+G P P + W+ NG+
Sbjct: 307 EAENSKGR-DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGE 365

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           P++      R +V    +    L   D+G Y C A N  G +Y    + V A AP+    
Sbjct: 366 PLAS---QNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLN 422

Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           P         G  +++ C+   APK  V W    + L    R T+   G L I +++ +D
Sbjct: 423 PVRRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSD 482

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP++ L+ 
Sbjct: 483 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTF 542

Query: 342 VWLRGSEPIDFESEPRFVQSNDY-----SLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W     PIDF+      +  +       LT+  +     G+YTC AQT +D    +AT+
Sbjct: 543 TWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATV 602

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GSIR 453
            V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G+   +R
Sbjct: 603 LVRGPPGPPGGVVVRDIGDTTIQ-LSWS----RGFDNHSPIAKYTLQARTPPAGKWKQVR 657

Query: 454 ELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGVPGTVQ 508
               N +G + T +V    P      RV+A N    G  +GP S+I    T E  P    
Sbjct: 658 TNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKI---RTREAAPSVAP 714

Query: 509 SLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565
           S  +   G+     + W  +  E  NG   GY + ++    T       R+P  +D    
Sbjct: 715 SGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQ--TARVPG-ADAQYF 771

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGSTPNNLVI 620
                 + P T + + +  Y + GDG ES   L Y     P   P  V  +G + + + +
Sbjct: 772 VYSNESVRPYTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNV 831

Query: 621 SWTAMPEIEHNAPHFKYRI-FWR 642
           +W  + + + N     Y I +W+
Sbjct: 832 TWEPVQQ-DMNGILLGYEIRYWK 853



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 151/369 (40%), Gaps = 26/369 (7%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           ++V L C    +P     W  +G  + + P  R  Q   G  +I+   +  D G Y C  
Sbjct: 55  EQVLLACRARASPPATYRWKMNGTEMKLEPGSR-HQLVGGNLVIMNPTKAQDAGVYQCLA 113

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVHNGK 164
           SN VG   S    L       F+ E  + + A E   V   C   +  P     W+ N  
Sbjct: 114 SNPVGTVVSREAILRFGFLQEFSKEERDPVKAHEGWGVMLPCNPPAHYPGLSYRWLLNEF 173

Query: 165 PISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY-----VNVLAH 217
           P +  P + R  V      + I     SD GNY C AT+ + +  K V+     +N+ A 
Sbjct: 174 P-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAE 232

Query: 218 -----APEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD 271
                AP I    P + Y + G+ V L C  FG P P + W      L+  ++T  E   
Sbjct: 233 DTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-PQWTTAEP-T 290

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
           L+I  V+F D G Y C A N  G     G + V+          D E + G +  + C A
Sbjct: 291 LQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAA 350

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
              P  + ++ WLR  EP+  ++    +  +   L  +K S  DSG Y C A+ +   I 
Sbjct: 351 AGKP--RPTVRWLRNGEPLASQNRVEVLAGD---LRFSKLSLEDSGMYQCVAENKHGTIY 405

Query: 392 AQATLTVQV 400
           A A L VQ 
Sbjct: 406 ASAELAVQA 414



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 147/652 (22%), Positives = 235/652 (36%), Gaps = 71/652 (10%)

Query: 88  SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
           +L I     SD G+Y+C      + S     +K   ++L+     L AP      P    
Sbjct: 191 NLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDTRLFAPSIKARFPAETY 250

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + VT EC A G P P I W      +S     P+       + I ++   D G Y 
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-----PQWTTAEPTLQIPSVSFEDEGTYE 305

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V A  PE  +   D     G  +   C   G P+P V W+ N 
Sbjct: 306 CEAENSKGRDTVQGRIIVQAQ-PEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNG 364

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
           + L       +  GDL+ + ++  DSG Y C A NK GT   S  L V+         P 
Sbjct: 365 EPLASQNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPV 424

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
              + A +            + K  ++W +G+E +   S  R   + D +L +   S  D
Sbjct: 425 RRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSS--RVTVTPDGTLIIRNISRSD 482

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLE---APS--------NFTLIQVIDAKKAVV--- 421
            G+YTC A+  +    +   L+V+   +   APS        N TL Q   +    +   
Sbjct: 483 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTL-QCHASHDPTMDLT 541

Query: 422 -SWN----PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
            +W     P+      GH+R   V+   E  G+ +I    +  G   T      V ++  
Sbjct: 542 FTWTLDDFPIDFDKPGGHYRRTNVK---ETIGDLTILNAQLRHGGKYTCMAQTVVDSASK 598

Query: 477 FARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMG 536
            A VL                            +    +G +   L W +    +  +  
Sbjct: 599 EATVLVRGPPG------------------PPGGVVVRDIGDTTIQLSWSRGFDNHSPIAK 640

Query: 537 YKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-- 594
           Y ++ ++    K   +    P   +    +A++ GL P   Y   +      G G  S  
Sbjct: 641 YTLQARTPPAGKWKQVRTN-PANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGP 699

Query: 595 ----KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
               +     P   P  + G G  P  L+++WT M     N   F Y + +RR  +   W
Sbjct: 700 SSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTH-W 758

Query: 651 NQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
               V        V +N+    + P+E+K+       DG  S+  L+ +  E
Sbjct: 759 QTARVPGADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTALVYSAEE 810



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 142/614 (23%), Positives = 227/614 (36%), Gaps = 84/614 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P+   +R+        L    +   D G Y C   N  G   
Sbjct: 348 CAAAGKPRPTVRWLRNGEPLASQNRVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTIY 405

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F + P    I AA    +   C+    P+  + W    + +  +  
Sbjct: 406 A-SAELAVQALAPDFRLNPVRRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSS- 463

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V P+  + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 464 --RVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 520

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G  + L C     P  ++ +     +        GG Y    + ET GDL I +    
Sbjct: 521 NLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLR 580

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS---------------- 324
             G+YTC A+  + +A  S   TV               + G +                
Sbjct: 581 HGGKYTCMAQTVVDSA--SKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPI 638

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQ 378
           A +   A + P+ K   V    + P + E      Q        DY   V  S+ L +G+
Sbjct: 639 AKYTLQARTPPAGKWKQV---RTNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGE 695

Query: 379 YTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGY 438
            +    +++   EA  ++                     + +V+W P+S +   G   GY
Sbjct: 696 PSG-PSSKIRTREAAPSVAPSG--------LSGGGGAPGELIVNWTPMSREYQNGDGFGY 746

Query: 439 KVQ-------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            +         W      G+  +  V   ES    V  + P      ++ ++N   +GP 
Sbjct: 747 LLSFRRQGSTHWQTARVPGADAQYFVYSNES----VRPYTPFE---VKIRSYNRRGDGPE 799

Query: 492 SEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKGTKV 549
           S      + E  P    + + A  + SS   + W   +Q  NG+L+GY+I+Y      + 
Sbjct: 800 SLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGILLGYEIRYWKAGDKEA 859

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVE 609
                R   +     TSA+++GL P+TKY + +  Y +AG G  S        K P    
Sbjct: 860 AADRVRTAGLD----TSARVSGLHPNTKYHVTVRAYNRAGTGPASPSANATTMKPPPR-- 913

Query: 610 GRGSTPNNLVISWT 623
                P N  ISWT
Sbjct: 914 ---RPPGN--ISWT 922



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 113/300 (37%), Gaps = 34/300 (11%)

Query: 125 APYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P F  +P    F   + EE V   C+A   P     W  NG  +   P +  + VG N 
Sbjct: 36  GPVFEDQPLSVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNL 95

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTC 240
           + +   +  D G Y C A+N +G V     +       E ++  +D     +G  V+L C
Sbjct: 96  VIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKAHEGWGVMLPC 155

Query: 241 RVFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGT 295
                 P     W+ N+      T GR+ + + TG+L I     +D G Y+C A + +  
Sbjct: 156 NPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDF 215

Query: 296 AQGSGSLTVKEHTHITDQPEDYEVEA---------------GQSATFRCNAVSDPSLKLS 340
           +  S      +   +    ED  + A               GQ  T  C A  +P  +  
Sbjct: 216 STKS---VFSKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPR-- 270

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +    +D    P++  + + +L +   S  D G Y C A+        Q  + VQ 
Sbjct: 271 IKWRK----VDGSLSPQWTTA-EPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQA 325


>gi|149728202|ref|XP_001503092.1| PREDICTED: peroxidasin homolog [Equus caballus]
          Length = 1431

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 195/422 (46%), Gaps = 30/422 (7%)

Query: 55  CIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
           C   G P P+ IW ++   + +    R++  + G +L+I++ + +DQG Y C   N  GE
Sbjct: 219 CRAEGNPKPEIIWLRNNNELSMKTDSRLNLLDDG-TLMIQNTQETDQGIYQCMAKNVAGE 277

Query: 113 AKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            K+  + L      A P F ++P+       E+VT EC A+G P P I W    +  +  
Sbjct: 278 VKTQEVTLRYFGSPARPAFVIQPQNTEVLVGESVTLECSATGHPVPRITWTKGDQ--TPV 335

Query: 170 PPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
           P +PR +V P+  + I+N+ + D+G Y C A+NS+G ++   ++ V A  P+ T  P+D 
Sbjct: 336 PEDPRVRVTPSGGLYIQNVAQEDSGEYACTASNSIGSIHATAFIIVQA-LPQFTVTPQDR 394

Query: 229 YTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSGEYTC 287
             ++G+TV   C   G P+P + W     +L+   R+ +L +G L+I+ VA  D G+Y C
Sbjct: 395 AVIEGQTVDFQCEAKGYPQPVIAWTKGGSQLSVDRRHLVLSSGTLRISGVALHDQGQYEC 454

Query: 288 FARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLR 345
            A N +G+ +    LTV+          P D  VE G +    C++  +P  + +I W  
Sbjct: 455 QAVNIIGSQRVVAHLTVQPRVTPVFASIPSDMTVEVGSNVQLPCSSQGEP--EPAITW-- 510

Query: 346 GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV----- 400
             + +      +F  S +  LT+      D+G+Y C A+  +        L+V V     
Sbjct: 511 NKDGVQVTESGKFHISPEGFLTIHDVGTADAGRYECVARNTIGQASVSMVLSVNVPDVSR 570

Query: 401 ---PLEAPSNFTLIQVID-----AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSI 452
              P  A S    I  +D      +  +    P SP  L   FR  +     E+   G I
Sbjct: 571 NGDPFVATSIVEAIATVDRAINSTRTHLFDSRPRSPNDLLALFRYPRDPYTVEQARAGEI 630

Query: 453 RE 454
            E
Sbjct: 631 FE 632



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 120/263 (45%), Gaps = 9/263 (3%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           L  + V L C   G P+P+  W+K D  P+    R+     G  L I++V   D G Y C
Sbjct: 306 LVGESVTLECSATGHPVPRITWTKGDQTPVPEDPRVRVTPSG-GLYIQNVAQEDSGEYAC 364

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
             SN +G   + +  + V A P FTV P+     E +TV F+C+A G P+P I W   G 
Sbjct: 365 TASNSIGSIHATAF-IIVQALPQFTVTPQDRAVIEGQTVDFQCEAKGYPQPVIAWTKGG- 422

Query: 165 PISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA-PEIT 222
             SQ   + R  V     + I  +   D G Y C A N +G      ++ V     P   
Sbjct: 423 --SQLSVDRRHLVLSSGTLRISGVALHDQGQYECQAVNIIGSQRVVAHLTVQPRVTPVFA 480

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
             P D     G  V L C   G P+P + W  +  ++T  G++ I   G L I DV  AD
Sbjct: 481 SIPSDMTVEVGSNVQLPCSSQGEPEPAITWNKDGVQVTESGKFHISPEGFLTIHDVGTAD 540

Query: 282 SGEYTCFARNKLGTAQGSGSLTV 304
           +G Y C ARN +G A  S  L+V
Sbjct: 541 AGRYECVARNTIGQASVSMVLSV 563



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 125/279 (44%), Gaps = 9/279 (3%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T EP+  +     TV F C+A G P+PEI W+ N   +S    +    +    + I+
Sbjct: 198 PRITSEPQDADVTSGNTVFFTCRAEGNPKPEIIWLRNNNELSMKTDSRLNLLDDGTLMIQ 257

Query: 186 NLRKSDTGNYGCNATNSLGYV-YKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRV 242
           N +++D G Y C A N  G V  ++V +        P     P++   + G++V L C  
Sbjct: 258 NTQETDQGIYQCMAKNVAGEVKTQEVTLRYFGSPARPAFVIQPQNTEVLVGESVTLECSA 317

Query: 243 FGAPKPEVNWIHNQKELT--GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSG 300
            G P P + W    +       R  +  +G L I +VA  DSGEY C A N +G+   + 
Sbjct: 318 TGHPVPRITWTKGDQTPVPEDPRVRVTPSGGLYIQNVAQEDSGEYACTASNSIGSIHATA 377

Query: 301 SLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQ 360
            + V+     T  P+D  V  GQ+  F+C A   P  +  I W +G   +  +     + 
Sbjct: 378 FIIVQALPQFTVTPQDRAVIEGQTVDFQCEAKGYP--QPVIAWTKGGSQLSVDRRHLVLS 435

Query: 361 SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           S   +L ++  +  D GQY C+A   +      A LTVQ
Sbjct: 436 SG--TLRISGVALHDQGQYECQAVNIIGSQRVVAHLTVQ 472



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 12/185 (6%)

Query: 35  QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR---ISQGNYGKSLII 91
           Q  VT +    +  + V+  C   G P P   W+K G  ++   R   +S G    +L I
Sbjct: 386 QFTVTPQDRAVIEGQTVDFQCEAKGYPQPVIAWTKGGSQLSVDRRHLVLSSG----TLRI 441

Query: 92  KHVEFSDQGSYTCEVSNGVGEAKSYS-IDLSVLAAPYFTVEPEFINAAEEETVTFECKAS 150
             V   DQG Y C+  N +G  +  + + +     P F   P  +       V   C + 
Sbjct: 442 SGVALHDQGQYECQAVNIIGSQRVVAHLTVQPRVTPVFASIPSDMTVEVGSNVQLPCSSQ 501

Query: 151 GLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKD 209
           G PEP I W  +G  ++++    +  + P   +TI ++  +D G Y C A N++G     
Sbjct: 502 GEPEPAITWNKDGVQVTES---GKFHISPEGFLTIHDVGTADAGRYECVARNTIGQASVS 558

Query: 210 VYVNV 214
           + ++V
Sbjct: 559 MVLSV 563



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 2/79 (2%)

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           E   IT +P+D +V +G +  F C A  +P  K  I+WLR +  +  +++ R    +D +
Sbjct: 196 ERPRITSEPQDADVTSGNTVFFTCRAEGNP--KPEIIWLRNNNELSMKTDSRLNLLDDGT 253

Query: 366 LTVTKSSELDSGQYTCRAQ 384
           L +  + E D G Y C A+
Sbjct: 254 LMIQNTQETDQGIYQCMAK 272


>gi|158260993|dbj|BAF82674.1| unnamed protein product [Homo sapiens]
          Length = 1040

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 165/623 (26%), Positives = 266/623 (42%), Gaps = 45/623 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWTTAE----PTLQIPSVSFEDEGTYEC 306

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           E  N  G   +    + V A P +        A     + + C A+G P P + W+ NG+
Sbjct: 307 EAENSKGR-DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGE 365

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           P++      R +V    +    L   D+G Y C A N  G +Y    + V A AP+    
Sbjct: 366 PLAS---QNRVEVLAGDLRFSELSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLN 422

Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           P         G  +++ C+   APK  V W    + L    R T+   G L I +++ +D
Sbjct: 423 PVRRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSD 482

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP++ L+ 
Sbjct: 483 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTF 542

Query: 342 VWLRGSEPIDFESEPRFVQSNDY-----SLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W     PIDF+      +  +       LT+  +     G+YTC AQT +D    +AT+
Sbjct: 543 TWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATV 602

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GSIR 453
            V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G+   +R
Sbjct: 603 LVRGPPGPPGGVVVRDIGDTTIQ-LSWS----RGFDNHSPIAKYTLQARTPPAGKWKQVR 657

Query: 454 ELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGVPGTVQ 508
               N +G + T +V    P      RV+A N    G  +GP S+I    T E  P    
Sbjct: 658 TNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKI---RTREAAPSVAP 714

Query: 509 SLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565
           S  +   G+     + W  +  E  NG   GY + ++    T       R+P  +D    
Sbjct: 715 SGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQ--TARVPG-ADAQYF 771

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGSTPNNLVI 620
                 + P T + + +  Y + GDG ES   L Y     P   P  V  +G + + + +
Sbjct: 772 VYSNESVRPYTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNV 831

Query: 621 SWTAMPEIEHNAPHFKYRI-FWR 642
           +W  + + + N     Y I +W+
Sbjct: 832 TWEPVQQ-DMNGILLGYEIRYWK 853



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 151/369 (40%), Gaps = 26/369 (7%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           ++V L C    +P     W  +G  + + P  R  Q   G  +I+   +  D G Y C  
Sbjct: 55  EQVLLACRARASPPATYRWKMNGTEMKLEPGSR-HQLVGGNLVIMNPTKAQDAGVYQCLA 113

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVHNGK 164
           SN VG   S    L       F+ E  + + A E   V   C   +  P     W+ N  
Sbjct: 114 SNPVGTVVSREAILRFGFLQEFSKEERDPVKAHEGWGVMLPCNPPAHYPGLSYRWLLNEF 173

Query: 165 PISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY-----VNVLAH 217
           P +  P + R  V      + I     SD GNY C AT+ + +  K V+     +N+ A 
Sbjct: 174 P-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAE 232

Query: 218 -----APEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD 271
                AP I    P + Y + G+ V L C  FG P P + W      L+  ++T  E   
Sbjct: 233 DTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-PQWTTAEP-T 290

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
           L+I  V+F D G Y C A N  G     G + V+          D E + G +  + C A
Sbjct: 291 LQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAA 350

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
              P  + ++ WLR  EP+  ++    +  +   L  ++ S  DSG Y C A+ +   I 
Sbjct: 351 AGKP--RPTVRWLRNGEPLASQNRVEVLAGD---LRFSELSLEDSGMYQCVAENKHGTIY 405

Query: 392 AQATLTVQV 400
           A A L VQ 
Sbjct: 406 ASAELAVQA 414



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 147/652 (22%), Positives = 236/652 (36%), Gaps = 71/652 (10%)

Query: 88  SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
           +L I     SD G+Y+C      + S     +K   ++L+     L AP      P    
Sbjct: 191 NLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDTRLFAPSIKARFPAETY 250

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + VT EC A G P P I W      +S     P+       + I ++   D G Y 
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-----PQWTTAEPTLQIPSVSFEDEGTYE 305

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V A  PE  +   D     G  +   C   G P+P V W+ N 
Sbjct: 306 CEAENSKGRDTVQGRIIVQAQ-PEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNG 364

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
           + L       +  GDL+ ++++  DSG Y C A NK GT   S  L V+         P 
Sbjct: 365 EPLASQNRVEVLAGDLRFSELSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPV 424

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
              + A +            + K  ++W +G+E +   S  R   + D +L +   S  D
Sbjct: 425 RRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSS--RVTVTPDGTLIIRNISRSD 482

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLE---APS--------NFTLIQVIDAKKAVV--- 421
            G+YTC A+  +    +   L+V+   +   APS        N TL Q   +    +   
Sbjct: 483 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTL-QCHASHDPTMDLT 541

Query: 422 -SWN----PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
            +W     P+      GH+R   V+   E  G+ +I    +  G   T      V ++  
Sbjct: 542 FTWTLDDFPIDFDKPGGHYRRTNVK---ETIGDLTILNAQLRHGGKYTCMAQTVVDSASK 598

Query: 477 FARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMG 536
            A VL                            +    +G +   L W +    +  +  
Sbjct: 599 EATVLVRGPPG------------------PPGGVVVRDIGDTTIQLSWSRGFDNHSPIAK 640

Query: 537 YKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-- 594
           Y ++ ++    K   +    P   +    +A++ GL P   Y   +      G G  S  
Sbjct: 641 YTLQARTPPAGKWKQVRTN-PANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGP 699

Query: 595 ----KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
               +     P   P  + G G  P  L+++WT M     N   F Y + +RR  +   W
Sbjct: 700 SSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTH-W 758

Query: 651 NQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
               V        V +N+    + P+E+K+       DG  S+  L+ +  E
Sbjct: 759 QTARVPGADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTALVYSAEE 810



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 142/614 (23%), Positives = 227/614 (36%), Gaps = 84/614 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P+   +R+        L    +   D G Y C   N  G   
Sbjct: 348 CAAAGKPRPTVRWLRNGEPLASQNRVEV--LAGDLRFSELSLEDSGMYQCVAENKHGTIY 405

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F + P    I AA    +   C+    P+  + W    + +  +  
Sbjct: 406 A-SAELAVQALAPDFRLNPVRRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSS- 463

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V P+  + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 464 --RVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 520

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G  + L C     P  ++ +     +        GG Y    + ET GDL I +    
Sbjct: 521 NLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLR 580

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS---------------- 324
             G+YTC A+  + +A  S   TV               + G +                
Sbjct: 581 HGGKYTCMAQTVVDSA--SKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPI 638

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQ 378
           A +   A + P+ K   V    + P + E      Q        DY   V  S+ L +G+
Sbjct: 639 AKYTLQARTPPAGKWKQV---RTNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGE 695

Query: 379 YTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGY 438
            +    +++   EA  ++                     + +V+W P+S +   G   GY
Sbjct: 696 PSG-PSSKIRTREAAPSVAPSG--------LSGGGGAPGELIVNWTPMSREYQNGDGFGY 746

Query: 439 KVQ-------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            +         W      G+  +  V   ES    V  + P      ++ ++N   +GP 
Sbjct: 747 LLSFRRQGSTHWQTARVPGADAQYFVYSNES----VRPYTPFE---VKIRSYNRRGDGPE 799

Query: 492 SEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKGTKV 549
           S      + E  P    + + A  + SS   + W   +Q  NG+L+GY+I+Y      + 
Sbjct: 800 SLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGILLGYEIRYWKAGDKEA 859

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVE 609
                R   +     TSA+++GL P+TKY + +  Y +AG G  S        K P    
Sbjct: 860 AADRVRTAGLD----TSARVSGLHPNTKYHVTVRAYNRAGTGPASPSANATTMKPPPR-- 913

Query: 610 GRGSTPNNLVISWT 623
                P N  ISWT
Sbjct: 914 ---RPPGN--ISWT 922



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 113/300 (37%), Gaps = 34/300 (11%)

Query: 125 APYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P F  +P    F   + EE V   C+A   P     W  NG  +   P +  + VG N 
Sbjct: 36  GPVFEDQPLSVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNL 95

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTC 240
           + +   +  D G Y C A+N +G V     +       E ++  +D     +G  V+L C
Sbjct: 96  VIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKAHEGWGVMLPC 155

Query: 241 RVFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGT 295
                 P     W+ N+      T GR+ + + TG+L I     +D G Y+C A + +  
Sbjct: 156 NPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDF 215

Query: 296 AQGSGSLTVKEHTHITDQPEDYEVEA---------------GQSATFRCNAVSDPSLKLS 340
           +  S      +   +    ED  + A               GQ  T  C A  +P  +  
Sbjct: 216 STKS---VFSKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPR-- 270

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +    +D    P++  + + +L +   S  D G Y C A+        Q  + VQ 
Sbjct: 271 IKWRK----VDGSLSPQWTTA-EPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQA 325


>gi|120538513|gb|AAI29987.1| Contactin 2 (axonal) [Homo sapiens]
          Length = 1040

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 165/623 (26%), Positives = 266/623 (42%), Gaps = 45/623 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWTTAE----PTLQIPSVSFEDEGTYEC 306

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           E  N  G   +    + V A P +        A     + + C A+G P P + W+ NG+
Sbjct: 307 EAENSKGR-DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGE 365

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           P++      R +V    +    L   D+G Y C A N  G +Y    + V A AP+    
Sbjct: 366 PLAS---QNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLN 422

Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           P         G  +++ C+   APK  V W    + L    R T+   G L I +++ +D
Sbjct: 423 PVRRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSD 482

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP++ L+ 
Sbjct: 483 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTF 542

Query: 342 VWLRGSEPIDFESEPRFVQSNDY-----SLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W     PIDF+      +  +       LT+  +     G+YTC AQT +D    +AT+
Sbjct: 543 TWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATV 602

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GSIR 453
            V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G+   +R
Sbjct: 603 LVRGPPGPPGGVVVRDIGDTTIQ-LSWS----RGFDNHSPIAKYTLQARTPPAGKWKQVR 657

Query: 454 ELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGVPGTVQ 508
               N +G + T +V    P      RV+A N    G  +GP S+I    T E  P    
Sbjct: 658 TNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKI---RTREAAPSVAP 714

Query: 509 SLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565
           S  +   G+     + W  +  E  NG   GY + ++    T       R+P  +D    
Sbjct: 715 SGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQ--TARVPG-ADAQYF 771

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGSTPNNLVI 620
                 + P T + + +  Y + GDG ES   L Y     P   P  V  +G + + + +
Sbjct: 772 VYSNESVRPYTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNV 831

Query: 621 SWTAMPEIEHNAPHFKYRI-FWR 642
           +W  + + + N     Y I +W+
Sbjct: 832 TWEPVQQ-DMNGILLGYEIRYWK 853



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 151/369 (40%), Gaps = 26/369 (7%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           ++V L C    +P     W  +G  + + P  R  Q   G  +I+   +  D G Y C  
Sbjct: 55  EQVLLACRARASPPATYRWKMNGTEMKLEPGSR-HQLVGGNLVIMNPTKAQDAGVYQCLA 113

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVHNGK 164
           SN VG   S    L       F+ E  + + A E   V   C   +  P     W+ N  
Sbjct: 114 SNPVGTVVSREAILRFGFLQEFSKEERDPVKAHEGWGVMLPCNPPAHYPGLSYRWLLNEF 173

Query: 165 PISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY-----VNVLAH 217
           P +  P + R  V      + I     SD GNY C AT+ + +  K V+     +N+ A 
Sbjct: 174 P-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAE 232

Query: 218 -----APEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD 271
                AP I    P + Y + G+ V L C  FG P P + W      L+  ++T  E   
Sbjct: 233 DTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-PQWTTAEP-T 290

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
           L+I  V+F D G Y C A N  G     G + V+          D E + G +  + C A
Sbjct: 291 LQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAA 350

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
              P  + ++ WLR  EP+  ++    +  +   L  +K S  DSG Y C A+ +   I 
Sbjct: 351 AGKP--RPTVRWLRNGEPLASQNRVEVLAGD---LRFSKLSLEDSGMYQCVAENKHGTIY 405

Query: 392 AQATLTVQV 400
           A A L VQ 
Sbjct: 406 ASAELAVQA 414



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 147/652 (22%), Positives = 235/652 (36%), Gaps = 71/652 (10%)

Query: 88  SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
           +L I     SD G+Y+C      + S     +K   ++L+     L AP      P    
Sbjct: 191 NLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDTRLFAPSIKARFPAETY 250

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + VT EC A G P P I W      +S     P+       + I ++   D G Y 
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-----PQWTTAEPTLQIPSVSFEDEGTYE 305

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V A  PE  +   D     G  +   C   G P+P V W+ N 
Sbjct: 306 CEAENSKGRDTVQGRIIVQAQ-PEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNG 364

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
           + L       +  GDL+ + ++  DSG Y C A NK GT   S  L V+         P 
Sbjct: 365 EPLASQNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPV 424

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
              + A +            + K  ++W +G+E +   S  R   + D +L +   S  D
Sbjct: 425 RRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSS--RVTVTPDGTLIIRNISRSD 482

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLE---APS--------NFTLIQVIDAKKAVV--- 421
            G+YTC A+  +    +   L+V+   +   APS        N TL Q   +    +   
Sbjct: 483 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTL-QCHASHDPTMDLT 541

Query: 422 -SWN----PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
            +W     P+      GH+R   V+   E  G+ +I    +  G   T      V ++  
Sbjct: 542 FTWTLDDFPIDFDKPGGHYRRTNVK---ETIGDLTILNAQLRHGGKYTCMAQTVVDSASK 598

Query: 477 FARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMG 536
            A VL                            +    +G +   L W +    +  +  
Sbjct: 599 EATVLVRGPPG------------------PPGGVVVRDIGDTTIQLSWSRGFDNHSPIAK 640

Query: 537 YKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-- 594
           Y ++ ++    K   +    P   +    +A++ GL P   Y   +      G G  S  
Sbjct: 641 YTLQARTPPAGKWKQVRTN-PANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGP 699

Query: 595 ----KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
               +     P   P  + G G  P  L+++WT M     N   F Y + +RR  +   W
Sbjct: 700 SSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTH-W 758

Query: 651 NQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
               V        V +N+    + P+E+K+       DG  S+  L+ +  E
Sbjct: 759 QTARVPGADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTALVYSAEE 810



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 142/614 (23%), Positives = 227/614 (36%), Gaps = 84/614 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P+   +R+        L    +   D G Y C   N  G   
Sbjct: 348 CAAAGKPRPTVRWLRNGEPLASQNRVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTIY 405

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F + P    I AA    +   C+    P+  + W    + +  +  
Sbjct: 406 A-SAELAVQALAPDFRLNPVRRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSS- 463

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V P+  + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 464 --RVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 520

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G  + L C     P  ++ +     +        GG Y    + ET GDL I +    
Sbjct: 521 NLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLR 580

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS---------------- 324
             G+YTC A+  + +A  S   TV               + G +                
Sbjct: 581 HGGKYTCMAQTVVDSA--SKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPI 638

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQ 378
           A +   A + P+ K   V    + P + E      Q        DY   V  S+ L +G+
Sbjct: 639 AKYTLQARTPPAGKWKQV---RTNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGE 695

Query: 379 YTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGY 438
            +    +++   EA  ++                     + +V+W P+S +   G   GY
Sbjct: 696 PSG-PSSKIRTREAAPSVAPSG--------LSGGGGAPGELIVNWTPMSREYQNGDGFGY 746

Query: 439 KVQ-------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            +         W      G+  +  V   ES    V  + P      ++ ++N   +GP 
Sbjct: 747 LLSFRRQGSTHWQTARVPGADAQYFVYSNES----VRPYTPFE---VKIRSYNRRGDGPE 799

Query: 492 SEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKGTKV 549
           S      + E  P    + + A  + SS   + W   +Q  NG+L+GY+I+Y      + 
Sbjct: 800 SLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGILLGYEIRYWKAGDKEA 859

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVE 609
                R   +     TSA+++GL P+TKY + +  Y +AG G  S        K P    
Sbjct: 860 AADRVRTAGLD----TSARVSGLHPNTKYHVTVRAYNRAGTGPASPSANATTMKPPPR-- 913

Query: 610 GRGSTPNNLVISWT 623
                P N  ISWT
Sbjct: 914 ---RPPGN--ISWT 922



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 71/310 (22%), Positives = 117/310 (37%), Gaps = 34/310 (10%)

Query: 115 SYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           S +++      P F  +P    F   + EE V   C+A   P     W  NG  +   P 
Sbjct: 26  SSALESQTTFGPVFEDQPLSVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLEPG 85

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
           +  + VG N + +   +  D G Y C A+N +G V     +       E ++  +D    
Sbjct: 86  SRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKA 145

Query: 232 -DGKTVVLTCRVFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEY 285
            +G  V+L C      P     W+ N+      T GR+ + + TG+L I     +D G Y
Sbjct: 146 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 205

Query: 286 TCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA---------------GQSATFRCN 330
           +C A + +  +  S      +   +    ED  + A               GQ  T  C 
Sbjct: 206 SCLATSHMDFSTKS---VFSKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECF 262

Query: 331 AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
           A  +P  +  I W +    +D    P++  + + +L +   S  D G Y C A+      
Sbjct: 263 AFGNPVPR--IKWRK----VDGSLSPQWTTA-EPTLQIPSVSFEDEGTYECEAENSKGRD 315

Query: 391 EAQATLTVQV 400
             Q  + VQ 
Sbjct: 316 TVQGRIIVQA 325


>gi|444868|prf||1908253A TAG-1 protein (axonin 1)
          Length = 1040

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 165/623 (26%), Positives = 266/623 (42%), Gaps = 45/623 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWTTAE----PTLQIPSVTFEDEGTYEC 306

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           E  N  G   +    + V A P +        A     + + C A+G P P + W+ NG+
Sbjct: 307 EAENSKGR-DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGE 365

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           P++      R +V    +    L   D+G Y C A N  G +Y    + V A AP+    
Sbjct: 366 PLAS---QNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLN 422

Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           P         G  +++ C+   APK  V W    + L    R T+   G L I +++ +D
Sbjct: 423 PVRRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSD 482

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP++ L+ 
Sbjct: 483 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTF 542

Query: 342 VWLRGSEPIDFESEPRFVQSNDY-----SLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W     PIDF+      +  +       LT+  +     G+YTC AQT +D    +AT+
Sbjct: 543 TWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATV 602

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GSIR 453
            V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G+   +R
Sbjct: 603 LVRGPPGPPGGVVVRDIGDTTIQ-LSWS----RGFDNHSPIAKYTLQARTPPAGKWKQVR 657

Query: 454 ELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGVPGTVQ 508
               N +G + T +V    P      RV+A N    G  +GP S+I    T E  P    
Sbjct: 658 TNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKI---RTREAAPSVAP 714

Query: 509 SLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565
           S  +   G+     + W  +  E  NG   GY + ++    T       R+P  +D    
Sbjct: 715 SGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQ--TARVPG-ADAQYF 771

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGSTPNNLVI 620
                 + P T + + +  Y + GDG ES   L Y     P   P  V  +G + + + +
Sbjct: 772 VYSNESVRPYTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNV 831

Query: 621 SWTAMPEIEHNAPHFKYRI-FWR 642
           +W  + + + N     Y I +W+
Sbjct: 832 TWEPVQQ-DMNGILLGYEIRYWK 853



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 150/369 (40%), Gaps = 26/369 (7%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           ++V L C    +P     W  +G  + + P  R  Q   G  +I+   +  D G Y C  
Sbjct: 55  EQVLLACRARASPPATYRWKMNGTEMKLEPGSR-HQLVGGNLVIMNPTKAQDAGVYQCLA 113

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVHNGK 164
           SN VG   S    L       F+ E  + + A E   V   C   +  P     W+ N  
Sbjct: 114 SNPVGTVVSREAILRFGFLQEFSKEERDPVKAHEGWGVMLPCNPPAHYPGLSYRWLLNEF 173

Query: 165 PISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY-----VNVLAH 217
           P +  P + R  V      + I     SD GNY C AT+ + +  K V+     +N+ A 
Sbjct: 174 P-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAE 232

Query: 218 -----APEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD 271
                AP I    P + Y + G+ V L C  FG P P + W      L+  ++T  E   
Sbjct: 233 DTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-PQWTTAEP-T 290

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
           L+I  V F D G Y C A N  G     G + V+          D E + G +  + C A
Sbjct: 291 LQIPSVTFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAA 350

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
              P  + ++ WLR  EP+  ++    +  +   L  +K S  DSG Y C A+ +   I 
Sbjct: 351 AGKP--RPTVRWLRNGEPLASQNRVEVLAGD---LRFSKLSLEDSGMYQCVAENKHGTIY 405

Query: 392 AQATLTVQV 400
           A A L VQ 
Sbjct: 406 ASAELAVQA 414



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 147/652 (22%), Positives = 235/652 (36%), Gaps = 71/652 (10%)

Query: 88  SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
           +L I     SD G+Y+C      + S     +K   ++L+     L AP      P    
Sbjct: 191 NLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDTRLFAPSIKARFPAETY 250

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + VT EC A G P P I W      +S     P+       + I ++   D G Y 
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-----PQWTTAEPTLQIPSVTFEDEGTYE 305

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V A  PE  +   D     G  +   C   G P+P V W+ N 
Sbjct: 306 CEAENSKGRDTVQGRIIVQAQ-PEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNG 364

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
           + L       +  GDL+ + ++  DSG Y C A NK GT   S  L V+         P 
Sbjct: 365 EPLASQNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPV 424

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
              + A +            + K  ++W +G+E +   S  R   + D +L +   S  D
Sbjct: 425 RRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSS--RVTVTPDGTLIIRNISRSD 482

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLE---APS--------NFTLIQVIDAKKAVV--- 421
            G+YTC A+  +    +   L+V+   +   APS        N TL Q   +    +   
Sbjct: 483 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTL-QCHASHDPTMDLT 541

Query: 422 -SWN----PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
            +W     P+      GH+R   V+   E  G+ +I    +  G   T      V ++  
Sbjct: 542 FTWTLDDFPIDFDKPGGHYRRTNVK---ETIGDLTILNAQLRHGGKYTCMAQTVVDSASK 598

Query: 477 FARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMG 536
            A VL                            +    +G +   L W +    +  +  
Sbjct: 599 EATVLVRGPPG------------------PPGGVVVRDIGDTTIQLSWSRGFDNHSPIAK 640

Query: 537 YKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-- 594
           Y ++ ++    K   +    P   +    +A++ GL P   Y   +      G G  S  
Sbjct: 641 YTLQARTPPAGKWKQVRTN-PANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGP 699

Query: 595 ----KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
               +     P   P  + G G  P  L+++WT M     N   F Y + +RR  +   W
Sbjct: 700 SSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTH-W 758

Query: 651 NQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
               V        V +N+    + P+E+K+       DG  S+  L+ +  E
Sbjct: 759 QTARVPGADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTALVYSAEE 810



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 142/614 (23%), Positives = 227/614 (36%), Gaps = 84/614 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P+   +R+        L    +   D G Y C   N  G   
Sbjct: 348 CAAAGKPRPTVRWLRNGEPLASQNRVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTIY 405

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F + P    I AA    +   C+    P+  + W    + +  +  
Sbjct: 406 A-SAELAVQALAPDFRLNPVRRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSS- 463

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V P+  + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 464 --RVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 520

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G  + L C     P  ++ +     +        GG Y    + ET GDL I +    
Sbjct: 521 NLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLR 580

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS---------------- 324
             G+YTC A+  + +A  S   TV               + G +                
Sbjct: 581 HGGKYTCMAQTVVDSA--SKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPI 638

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQ 378
           A +   A + P+ K   V    + P + E      Q        DY   V  S+ L +G+
Sbjct: 639 AKYTLQARTPPAGKWKQV---RTNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGE 695

Query: 379 YTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGY 438
            +    +++   EA  ++                     + +V+W P+S +   G   GY
Sbjct: 696 PSG-PSSKIRTREAAPSVAPSG--------LSGGGGAPGELIVNWTPMSREYQNGDGFGY 746

Query: 439 KVQ-------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            +         W      G+  +  V   ES    V  + P      ++ ++N   +GP 
Sbjct: 747 LLSFRRQGSTHWQTARVPGADAQYFVYSNES----VRPYTPFE---VKIRSYNRRGDGPE 799

Query: 492 SEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKGTKV 549
           S      + E  P    + + A  + SS   + W   +Q  NG+L+GY+I+Y      + 
Sbjct: 800 SLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGILLGYEIRYWKAGDKEA 859

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVE 609
                R   +     TSA+++GL P+TKY + +  Y +AG G  S        K P    
Sbjct: 860 AADRVRTAGLD----TSARVSGLHPNTKYHVTVRAYNRAGTGPASPSANATTMKPPPR-- 913

Query: 610 GRGSTPNNLVISWT 623
                P N  ISWT
Sbjct: 914 ---RPPGN--ISWT 922



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 113/300 (37%), Gaps = 34/300 (11%)

Query: 125 APYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P F  +P    F   + EE V   C+A   P     W  NG  +   P +  + VG N 
Sbjct: 36  GPVFEDQPLSVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNL 95

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTC 240
           + +   +  D G Y C A+N +G V     +       E ++  +D     +G  V+L C
Sbjct: 96  VIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKAHEGWGVMLPC 155

Query: 241 RVFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGT 295
                 P     W+ N+      T GR+ + + TG+L I     +D G Y+C A + +  
Sbjct: 156 NPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDF 215

Query: 296 AQGSGSLTVKEHTHITDQPEDYEVEA---------------GQSATFRCNAVSDPSLKLS 340
           +  S      +   +    ED  + A               GQ  T  C A  +P  +  
Sbjct: 216 STKS---VFSKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPR-- 270

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +    +D    P++  + + +L +   +  D G Y C A+        Q  + VQ 
Sbjct: 271 IKWRK----VDGSLSPQWTTA-EPTLQIPSVTFEDEGTYECEAENSKGRDTVQGRIIVQA 325


>gi|326916456|ref|XP_003204523.1| PREDICTED: peroxidasin homolog [Meleagris gallopavo]
          Length = 1459

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 178/360 (49%), Gaps = 17/360 (4%)

Query: 51  VELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           V   C   G P P+ IW ++   + +    R++  + G +L+I++ + +DQG Y C   N
Sbjct: 242 VYFTCRAEGNPKPEIIWLRNNNELIMKEDSRLNLLDDG-TLMIQNTQETDQGIYQCMAKN 300

Query: 109 GVGEAKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             GE K+  + L      A P F + P+       E+VT EC A+G P+P+I W    + 
Sbjct: 301 VAGEVKTQEVTLRYFGSPARPSFVIHPQNTEVLVGESVTLECSATGHPQPQITWTKGDR- 359

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            +  P +PR  + P+  + I+N+++ D+G Y C ATNS+G ++   Y+ V A  P+ T  
Sbjct: 360 -TPLPSDPRITITPSGGLYIQNVKQEDSGEYTCFATNSVGNIHATAYIIVQA-LPQFTVT 417

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSG 283
           P+D+  ++G+TV   C   G P+P + W     +L+   R+ +L +G L+I+ VA  D G
Sbjct: 418 PQDKTVIEGQTVDFPCEAQGYPQPVIAWTKGGGQLSVDRRHLVLSSGTLRISRVALHDQG 477

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +Y C A N +G+ +    LTV+          P D  VE G +    C+A  +P  +  I
Sbjct: 478 QYECQAVNIIGSQRIVVYLTVQPRVTPVFASVPSDMTVEVGTNVQIPCSAQGEP--EPVI 535

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            W    + +      +F  S +  LT+      D G+Y C A+  + +      L+V VP
Sbjct: 536 TW--NKDGVQVTESGKFHVSPEGYLTIRDVGTADEGRYECVARNTIGYSSVSMVLSVNVP 593



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/265 (34%), Positives = 122/265 (46%), Gaps = 11/265 (4%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
            L  + V L C   G P PQ  W+K D  P+    RI+    G  L I++V+  D G YT
Sbjct: 332 VLVGESVTLECSATGHPQPQITWTKGDRTPLPSDPRITITPSG-GLYIQNVKQEDSGEYT 390

Query: 104 CEVSNGVG--EAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVH 161
           C  +N VG   A +Y I   V A P FTV P+     E +TV F C+A G P+P I W  
Sbjct: 391 CFATNSVGNIHATAYII---VQALPQFTVTPQDKTVIEGQTVDFPCEAQGYPQPVIAWTK 447

Query: 162 NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA-PE 220
            G  +S    +     G  RI+   L   D G Y C A N +G     VY+ V     P 
Sbjct: 448 GGGQLSVDRRHLVLSSGTLRISRVALH--DQGQYECQAVNIIGSQRIVVYLTVQPRVTPV 505

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
               P D     G  V + C   G P+P + W  +  ++T  G++ +   G L I DV  
Sbjct: 506 FASVPSDMTVEVGTNVQIPCSAQGEPEPVITWNKDGVQVTESGKFHVSPEGYLTIRDVGT 565

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTV 304
           AD G Y C ARN +G +  S  L+V
Sbjct: 566 ADEGRYECVARNTIGYSSVSMVLSV 590



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 153/347 (44%), Gaps = 25/347 (7%)

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAA--PYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           Q + TCE    +      +I    L    P  T EP+ ++     TV F C+A G P+PE
Sbjct: 196 QAAATCEYPRRIQGRSVATITPEELNCERPRITSEPQDVDVTSGNTVYFTCRAEGNPKPE 255

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV-YKDVYVNVL 215
           I W+ N   +     +    +    + I+N +++D G Y C A N  G V  ++V +   
Sbjct: 256 IIWLRNNNELIMKEDSRLNLLDDGTLMIQNTQETDQGIYQCMAKNVAGEVKTQEVTLRYF 315

Query: 216 AH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGD 271
                P     P++   + G++V L C   G P+P++ W    +    +  R TI  +G 
Sbjct: 316 GSPARPSFVIHPQNTEVLVGESVTLECSATGHPQPQITWTKGDRTPLPSDPRITITPSGG 375

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
           L I +V   DSGEYTCFA N +G    +  + V+     T  P+D  V  GQ+  F C A
Sbjct: 376 LYIQNVKQEDSGEYTCFATNSVGNIHATAYIIVQALPQFTVTPQDKTVIEGQTVDFPCEA 435

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
              P  +  I W +G   +  +     + S   +L +++ +  D GQY C+A   +    
Sbjct: 436 QGYP--QPVIAWTKGGGQLSVDRRHLVLSSG--TLRISRVALHDQGQYECQAVNIIGSQR 491

Query: 392 AQATLTVQ-----VPLEAPSNFTL-----IQVIDAKKA----VVSWN 424
               LTVQ     V    PS+ T+     +Q+  + +     V++WN
Sbjct: 492 IVVYLTVQPRVTPVFASVPSDMTVEVGTNVQIPCSAQGEPEPVITWN 538



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 14/181 (7%)

Query: 31  HAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR---ISQGNYGK 87
            A  Q  VT + +  +  + V+  C   G P P   W+K G  ++   R   +S G    
Sbjct: 409 QALPQFTVTPQDKTVIEGQTVDFPCEAQGYPQPVIAWTKGGGQLSVDRRHLVLSSG---- 464

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSV--LAAPYFTVEPEFINAAEEETVTF 145
           +L I  V   DQG Y C+  N +G ++   + L+V     P F   P  +       V  
Sbjct: 465 TLRISRVALHDQGQYECQAVNIIG-SQRIVVYLTVQPRVTPVFASVPSDMTVEVGTNVQI 523

Query: 146 ECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLG 204
            C A G PEP I W  +G  ++++    +  V P   +TI ++  +D G Y C A N++G
Sbjct: 524 PCSAQGEPEPVITWNKDGVQVTES---GKFHVSPEGYLTIRDVGTADEGRYECVARNTIG 580

Query: 205 Y 205
           Y
Sbjct: 581 Y 581


>gi|44890693|gb|AAH66864.1| Cntn1 protein [Mus musculus]
 gi|148672348|gb|EDL04295.1| contactin 1 [Mus musculus]
          Length = 1020

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 157/581 (27%), Positives = 245/581 (42%), Gaps = 42/581 (7%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K    +  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 241 PADIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 298

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 299 NIQLEDEGLYECEAENIRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCIA 354

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 355 TGKPIPTIRWLKNGYSYHKG------ELRLYDVTFEN-----AGMYQCIAENAYGSIYAN 403

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  VV+ C+   APKP+ +W    + L    R  I
Sbjct: 404 AELKILALAPTFEMNPMKKKILAAKGGRVVIECKPKAAPKPKFSWSKGTEWLVNSSRILI 463

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L +   T I   P + ++  G++AT
Sbjct: 464 WEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITNPTRIILAPINADITVGENAT 523

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-------PRFVQSNDYSLTVTKSSELDSGQY 379
            +C A  DP+L L+ VW      IDF  E         F+   +  L +  +    +G+Y
Sbjct: 524 MQCAASFDPALDLTFVWSFNGYVIDFNKEITHIHYQRNFMLDANGELLIRNAQLKHAGRY 583

Query: 380 TCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYK 439
           TC AQT +D   A A L V+ P   P     I+ I A    ++W+  S          Y 
Sbjct: 584 TCTAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYT 640

Query: 440 VQTWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
           +QT T    D + +  +  + +G   + +    +P  +   RV+A N    G PS   + 
Sbjct: 641 IQTKTILSDDWKDAKTDPPIIEGNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSNR 700

Query: 498 VTPEGVPGTVQSLEAIPLGSS--AFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
           +  +G    V   +    G +     + W  +  E   G   GY + ++   G +   + 
Sbjct: 701 IKTDGAAPNVAPSDVGGGGGTNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT 760

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
              P   D      K   + PST +++ +  +   GDG  S
Sbjct: 761 VTNP---DTGRYVHKDETMTPSTAFQVKVKAFNNKGDGPYS 798



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 149/646 (23%), Positives = 243/646 (37%), Gaps = 61/646 (9%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 189 VSQTN--GNLYIANVESSDRGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVV 246

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  I     + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 247 QFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 303

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N  G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 304 DEGLYECEAENIRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCIATGKPIPTI 362

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G+   +  L +      
Sbjct: 363 RWLKN-----GYSY---HKGELRLYDVTFENAGMYQCIAENAYGSIYANAELKILALAPT 414

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   D SL 
Sbjct: 415 FEMNPMKKKILAAKGGRVVIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 470

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC A+       +  TL +  P   + AP N  +    +A  +   S+
Sbjct: 471 INNITRNDGGIYTCFAENNRGKANSTGTLVITNPTRIILAPINADITVGENATMQCAASF 530

Query: 424 NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAF 483
           +P    +    F GY +    E       R  +++          +   A +        
Sbjct: 531 DPALDLTFVWSFNGYVIDFNKEITHIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTI 590

Query: 484 NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQS 543
               +     ++           ++ + A     ++  L W +    +  +  Y I+ ++
Sbjct: 591 VDNSSASADLVVRGPPGPPGGLRIEDIRA-----TSVALTWSRGSDNHSPISKYTIQTKT 645

Query: 544 V-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES---- 594
           +     K  K  P     P I +    SAK   L P  +Y   +      G G  S    
Sbjct: 646 ILSDDWKDAKTDP-----PII-EGNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSN 699

Query: 595 --KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
             K     P   P +V G G T   L I+W  +    H   +F Y + ++  + GE W +
Sbjct: 700 RIKTDGAAPNVAPSDVGGGGGTNRELTITWAPLSREYHYGNNFGYIVAFKPFD-GEEWKK 758

Query: 653 DDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
             V +      V  ++ T  P   +++KV     + DG  S+  +I
Sbjct: 759 VTVTNPDTGRYVHKDE-TMTPSTAFQVKVKAFNNKGDGPYSLVAVI 803



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 141/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   ++  +DR S    G +L+I + +   D G Y C  S
Sbjct: 60  KVSLNCRARASPFPVYKWRMNNGDVDLTNDRYSM--VGGNLVINNPDKQKDAGVYYCLAS 117

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 118 NNYGMVRSTEATLSFGYLDPFPPEERPEVKVKEGKGMVLLC------DPPYHFPDDLSYR 171

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 172 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSP--SITKSVFSKFIP 228

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD YT+ G+ V L C   G P P++ W    + +      
Sbjct: 229 LIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 288

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 289 STSGAVLKIFNIQLEDEGLYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 348

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+       + E R      Y +T       ++G Y C A+ 
Sbjct: 349 YWPCIATGKPI--PTIRWLKNGYSY-HKGELRL-----YDVTFE-----NAGMYQCIAEN 395

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 396 AYGSIYANAELKI 408



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 111/292 (38%), Gaps = 28/292 (9%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPR-RKVGPNRITI 184
           P  T+ PE    + E  V+  C+A   P P   W  N   +     N R   VG N +  
Sbjct: 47  PINTIYPE---ESLEGKVSLNCRARASPFPVYKWRMNNGDVDLT--NDRYSMVGGNLVIN 101

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV- 242
              ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   
Sbjct: 102 NPDKQKDAGVYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVKVKEGKGMVLLCDPP 161

Query: 243 FGAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQ 297
           +  P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T  
Sbjct: 162 YHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSPSITKS 221

Query: 298 GSGSLT----VKEHT------HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS 347
                     + E T       I  Q +D     GQ+ T  C A+ +P     I W +  
Sbjct: 222 VFSKFIPLIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNPV--PDIRWRKVL 279

Query: 348 EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           EP+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 280 EPMPSTAE---ISTSGAVLKIFNIQLEDEGLYECEAENIRGKDKHQARIYVQ 328



 Score = 40.8 bits (94), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+    ++V+ + +  V W  V    L      Y+++ W   D E +   + V   
Sbjct: 810 PSEAPTEVG-VKVLSSSEISVHWKHV----LEKIVESYQIRYWAGHDKEAAAHRVQVTSQ 864

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GP S++I   T +  P     + +     S +
Sbjct: 865 E-YSARLENLLPDTQYFIEVGACNSAGCGPSSDVIETFTRKAPPSQPPRIISSVRSGSRY 923

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYKI Y+
Sbjct: 924 IITWDHVVALSNESTVTGYKILYR 947


>gi|355558857|gb|EHH15637.1| hypothetical protein EGK_01752 [Macaca mulatta]
          Length = 1040

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 164/629 (26%), Positives = 267/629 (42%), Gaps = 57/629 (9%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWTTAE----PTLQIPSVSFEDEGTYEC 306

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEE------ETVTFECKASGLPEPEIH 158
           E  N  G         +V        +PE++    +        + + C A+G P P + 
Sbjct: 307 EAENSKGRD-------TVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVR 359

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+P++      R +V    +    L   D+G Y C A N  G +Y    + V A A
Sbjct: 360 WLRNGEPLAS---QNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALA 416

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKIT 275
           P+    P         G  +V+ C+   APK  V W    + L    R T+   G L I 
Sbjct: 417 PDFRLNPVRRLIPAARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIR 476

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           +++ +D G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP
Sbjct: 477 NISRSDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTLQCHASHDP 536

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDY-----SLTVTKSSELDSGQYTCRAQTELDFI 390
           ++ L+  W     PIDF+      +  +       LT+  +     G+YTC AQT +D  
Sbjct: 537 TMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSA 596

Query: 391 EAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDG 448
             +AT+ V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G
Sbjct: 597 SKEATVLVRGPPGPPGGVVVRDIGDTTIQ-LSWS----RGFDNHSPIAKYTLQARTPPAG 651

Query: 449 E-GSIRELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEG 502
           +   +R    N +G + T +V    P      RV+A N    G  +GP S+I    T E 
Sbjct: 652 KWKQVRTNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKI---RTKEA 708

Query: 503 VPGTVQSLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
            P    S  +   G+     + W  +  E  NG   GY + ++    T       R+P  
Sbjct: 709 APSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQ--TARVPG- 765

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGST 614
           +D          + P T + + +  Y + G+G ES   L Y     P   P  V  +G +
Sbjct: 766 ADAQYFVYSNESVRPYTPFEVKIRSYNRRGEGPESLTALVYSAEEEPRVAPTKVWAKGVS 825

Query: 615 PNNLVISWTAMPEIEHNAPHFKYRI-FWR 642
            + + ++W  + + + N     Y I +W+
Sbjct: 826 SSEMNVTWEPVQQ-DMNGILLGYEIRYWK 853



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 150/374 (40%), Gaps = 38/374 (10%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           ++V L C    +P     W  +G  + + P  R  Q   G  +I+   +  D G Y C  
Sbjct: 55  EQVLLACRARASPPATYRWKMNGTEMKLEPGSR-HQLVGGNLVIMNPTKAQDAGVYQCLA 113

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIH------- 158
           SN VG   S    L       F    EF     +   T E     LP  P  H       
Sbjct: 114 SNPVGTVVSREAILR------FGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYR 167

Query: 159 WVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY----- 211
           W+ N  P +  P + R  V      + I     SD GNY C AT+ + +  K V+     
Sbjct: 168 WLLNEFP-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQ 226

Query: 212 VNVLAH-----APEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           +N+ A      AP I    P + Y + G+ V L C  FG P P + W      L+  ++T
Sbjct: 227 LNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-PQWT 285

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
             E   L+I  V+F D G Y C A N  G     G + V+          D E + G + 
Sbjct: 286 TAEP-TLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNL 344

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P  + ++ WLR  EP+  ++    +  +   L  +K S  DSG Y C A+ 
Sbjct: 345 RWGCAAAGKP--RPTVRWLRNGEPLASQNRVEVLAGD---LRFSKLSLEDSGMYQCVAEN 399

Query: 386 ELDFIEAQATLTVQ 399
           +   I A A L VQ
Sbjct: 400 KHGTIYASAELAVQ 413



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 149/654 (22%), Positives = 237/654 (36%), Gaps = 75/654 (11%)

Query: 88  SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
           +L I     SD G+Y+C      + S     +K   ++L+     L AP      P    
Sbjct: 191 NLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDTRLFAPSIKARFPAETY 250

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + VT EC A G P P I W      +S     P+       + I ++   D G Y 
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-----PQWTTAEPTLQIPSVSFEDEGTYE 305

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V A  PE  +   D     G  +   C   G P+P V W+ N 
Sbjct: 306 CEAENSKGRDTVQGRIIVQAQ-PEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNG 364

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
           + L       +  GDL+ + ++  DSG Y C A NK GT   S  L V+         P 
Sbjct: 365 EPLASQNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPV 424

Query: 316 DYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
              + A  G      C   + P  K  ++W +G+E +   S  R   + D +L +   S 
Sbjct: 425 RRLIPAARGGEIVIPCQPRAAP--KAVVLWSKGTEILVNSS--RVTVTPDGTLIIRNISR 480

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APS--------NFTLIQVIDAKKAVV- 421
            D G+YTC A+  +    +   L+V+   +   APS        N TL Q   +    + 
Sbjct: 481 SDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTL-QCHASHDPTMD 539

Query: 422 ---SWN----PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
              +W     P+      GH+R   V+   E  G+ +I    +  G   T      V ++
Sbjct: 540 LTFTWTLDDFPIDFDKPGGHYRRTNVK---ETIGDLTILNAQLRHGGKYTCMAQTVVDSA 596

Query: 475 KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
              A VL                            +    +G +   L W +    +  +
Sbjct: 597 SKEATVLVRGPPG------------------PPGGVVVRDIGDTTIQLSWSRGFDNHSPI 638

Query: 535 MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
             Y ++ ++    K   +    P   +    +A++ GL P   Y   +      G G  S
Sbjct: 639 AKYTLQARTPPAGKWKQVRTN-PANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPS 697

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +     P   P  + G G  P  L+++WT M     N   F Y + +RR  +  
Sbjct: 698 GPSSKIRTKEAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTH 757

Query: 649 AWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
            W    V        V +N+    + P+E+K+       +G  S+  L+ +  E
Sbjct: 758 -WQTARVPGADAQYFVYSNESVRPYTPFEVKIRSYNRRGEGPESLTALVYSAEE 810



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 143/617 (23%), Positives = 226/617 (36%), Gaps = 90/617 (14%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P+   +R+        L    +   D G Y C   N  G   
Sbjct: 348 CAAAGKPRPTVRWLRNGEPLASQNRVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTIY 405

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F + P    I AA    +   C+    P+  + W    + +  +  
Sbjct: 406 A-SAELAVQALAPDFRLNPVRRLIPAARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSS- 463

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V P+  + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 464 --RVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 520

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G  + L C     P  ++ +     +        GG Y    + ET GDL I +    
Sbjct: 521 NLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLR 580

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS---------------- 324
             G+YTC A+  + +A  S   TV               + G +                
Sbjct: 581 HGGKYTCMAQTVVDSA--SKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPI 638

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQ 378
           A +   A + P+ K   V    + P + E      Q        DY   V  S+ L +G+
Sbjct: 639 AKYTLQARTPPAGKWKQV---RTNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGE 695

Query: 379 YTCRAQTELDFIEAQATLTVQVPLEAPS---NFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
                        +  +  ++    APS   +          + +V+W P+S +   G  
Sbjct: 696 ------------PSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDG 743

Query: 436 RGYKVQ-------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
            GY +         W      G+  +  V   ES    V  + P      ++ ++N    
Sbjct: 744 FGYLLSFRRQGSTHWQTARVPGADAQYFVYSNES----VRPYTPFE---VKIRSYNRRGE 796

Query: 489 GPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKG 546
           GP S      + E  P    + + A  + SS   + W   +Q  NG+L+GY+I+Y     
Sbjct: 797 GPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGILLGYEIRYWKAGD 856

Query: 547 TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPD 606
            +      R   +     TSA+++GL P+TKY + +  Y +AG G  S        K P 
Sbjct: 857 KEAAADRVRTAGLD----TSARVSGLHPNTKYHVTVRAYNRAGTGPASPSANATTMKPPP 912

Query: 607 NVEGRGSTPNNLVISWT 623
                   P N  ISWT
Sbjct: 913 R-----RPPGN--ISWT 922



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 114/299 (38%), Gaps = 34/299 (11%)

Query: 125 APYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P F  +P    F   + EE V   C+A   P     W  NG  +   P +  + VG N 
Sbjct: 36  GPVFEDQPLSVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNL 95

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTC 240
           + +   +  D G Y C A+N +G V     +       E ++  +D   T +G  V+L C
Sbjct: 96  VIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKTHEGWGVMLPC 155

Query: 241 RVFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGT 295
                 P     W+ N+      T GR+ + + TG+L I     +D G Y+C A + +  
Sbjct: 156 NPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDF 215

Query: 296 AQGSGSLTVKEHTHITDQPEDYEVEA---------------GQSATFRCNAVSDPSLKLS 340
           +  S      +   +    ED  + A               GQ  T  C A  +P  +  
Sbjct: 216 STKS---VFSKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPR-- 270

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           I W +    +D    P++  + + +L +   S  D G Y C A+        Q  + VQ
Sbjct: 271 IKWRK----VDGSLSPQWTTA-EPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQ 324


>gi|388452968|ref|NP_001252701.1| contactin-2 precursor [Macaca mulatta]
 gi|355782630|gb|EHH64551.1| hypothetical protein EGM_17796 [Macaca fascicularis]
 gi|387542506|gb|AFJ71880.1| contactin-2 precursor [Macaca mulatta]
          Length = 1040

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 165/623 (26%), Positives = 266/623 (42%), Gaps = 45/623 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWTTAE----PTLQIPSVSFEDEGTYEC 306

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           E  N  G   +    + V A P +        A     + + C A+G P P + W+ NG+
Sbjct: 307 EAENSKGR-DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGE 365

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           P++      R +V    +    L   D+G Y C A N  G +Y    + V A AP+    
Sbjct: 366 PLAS---QNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLN 422

Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           P         G  +V+ C+   APK  V W    + L    R T+   G L I +++ +D
Sbjct: 423 PVRRLIPAARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSD 482

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP++ L+ 
Sbjct: 483 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTF 542

Query: 342 VWLRGSEPIDFESEPRFVQSNDY-----SLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W     PIDF+      +  +       LT+  +     G+YTC AQT +D    +AT+
Sbjct: 543 TWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATV 602

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GSIR 453
            V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G+   +R
Sbjct: 603 LVRGPPGPPGGVVVRDIGDTTIQ-LSWS----RGFDNHSPIAKYTLQARTPPAGKWKQVR 657

Query: 454 ELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGVPGTVQ 508
               N +G + T +V    P      RV+A N    G  +GP S+I    T E  P    
Sbjct: 658 TNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKI---RTKEAAPSVAP 714

Query: 509 SLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565
           S  +   G+     + W  +  E  NG   GY + ++    T       R+P  +D    
Sbjct: 715 SGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQ--TARVPG-ADAQYF 771

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGSTPNNLVI 620
                 + P T + + +  Y + G+G ES   L Y     P   P  V  +G + + + +
Sbjct: 772 VYSNESVRPYTPFEVKIRSYNRRGEGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNV 831

Query: 621 SWTAMPEIEHNAPHFKYRI-FWR 642
           +W  + + + N     Y I +W+
Sbjct: 832 TWEPVQQ-DMNGILLGYEIRYWK 853



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 150/375 (40%), Gaps = 38/375 (10%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           ++V L C    +P     W  +G  + + P  R  Q   G  +I+   +  D G Y C  
Sbjct: 55  EQVLLACRARASPPATYRWKMNGTEMKLEPGSR-HQLVGGNLVIMNPTKAQDAGVYQCLA 113

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIH------- 158
           SN VG   S    L       F    EF     +   T E     LP  P  H       
Sbjct: 114 SNPVGTVVSREAILR------FGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYR 167

Query: 159 WVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY----- 211
           W+ N  P +  P + R  V      + I     SD GNY C AT+ + +  K V+     
Sbjct: 168 WLLNEFP-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQ 226

Query: 212 VNVLAH-----APEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           +N+ A      AP I    P + Y + G+ V L C  FG P P + W      L+  ++T
Sbjct: 227 LNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-PQWT 285

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
             E   L+I  V+F D G Y C A N  G     G + V+          D E + G + 
Sbjct: 286 TAEP-TLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNL 344

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P  + ++ WLR  EP+  ++    +  +   L  +K S  DSG Y C A+ 
Sbjct: 345 RWGCAAAGKP--RPTVRWLRNGEPLASQNRVEVLAGD---LRFSKLSLEDSGMYQCVAEN 399

Query: 386 ELDFIEAQATLTVQV 400
           +   I A A L VQ 
Sbjct: 400 KHGTIYASAELAVQA 414



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 149/654 (22%), Positives = 237/654 (36%), Gaps = 75/654 (11%)

Query: 88  SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
           +L I     SD G+Y+C      + S     +K   ++L+     L AP      P    
Sbjct: 191 NLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDTRLFAPSIKARFPAETY 250

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + VT EC A G P P I W      +S     P+       + I ++   D G Y 
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-----PQWTTAEPTLQIPSVSFEDEGTYE 305

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V A  PE  +   D     G  +   C   G P+P V W+ N 
Sbjct: 306 CEAENSKGRDTVQGRIIVQAQ-PEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNG 364

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
           + L       +  GDL+ + ++  DSG Y C A NK GT   S  L V+         P 
Sbjct: 365 EPLASQNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPV 424

Query: 316 DYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
              + A  G      C   + P  K  ++W +G+E +   S  R   + D +L +   S 
Sbjct: 425 RRLIPAARGGEIVIPCQPRAAP--KAVVLWSKGTEILVNSS--RVTVTPDGTLIIRNISR 480

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APS--------NFTLIQVIDAKKAVV- 421
            D G+YTC A+  +    +   L+V+   +   APS        N TL Q   +    + 
Sbjct: 481 SDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTL-QCHASHDPTMD 539

Query: 422 ---SWN----PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
              +W     P+      GH+R   V+   E  G+ +I    +  G   T      V ++
Sbjct: 540 LTFTWTLDDFPIDFDKPGGHYRRTNVK---ETIGDLTILNAQLRHGGKYTCMAQTVVDSA 596

Query: 475 KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
              A VL                            +    +G +   L W +    +  +
Sbjct: 597 SKEATVLVRGPPG------------------PPGGVVVRDIGDTTIQLSWSRGFDNHSPI 638

Query: 535 MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
             Y ++ ++    K   +    P   +    +A++ GL P   Y   +      G G  S
Sbjct: 639 AKYTLQARTPPAGKWKQVRTN-PANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPS 697

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +     P   P  + G G  P  L+++WT M     N   F Y + +RR  +  
Sbjct: 698 GPSSKIRTKEAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTH 757

Query: 649 AWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
            W    V        V +N+    + P+E+K+       +G  S+  L+ +  E
Sbjct: 758 -WQTARVPGADAQYFVYSNESVRPYTPFEVKIRSYNRRGEGPESLTALVYSAEE 810



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 143/617 (23%), Positives = 226/617 (36%), Gaps = 90/617 (14%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P+   +R+        L    +   D G Y C   N  G   
Sbjct: 348 CAAAGKPRPTVRWLRNGEPLASQNRVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTIY 405

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F + P    I AA    +   C+    P+  + W    + +  +  
Sbjct: 406 A-SAELAVQALAPDFRLNPVRRLIPAARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSS- 463

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V P+  + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 464 --RVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 520

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G  + L C     P  ++ +     +        GG Y    + ET GDL I +    
Sbjct: 521 NLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLR 580

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS---------------- 324
             G+YTC A+  + +A  S   TV               + G +                
Sbjct: 581 HGGKYTCMAQTVVDSA--SKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPI 638

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQ 378
           A +   A + P+ K   V    + P + E      Q        DY   V  S+ L +G+
Sbjct: 639 AKYTLQARTPPAGKWKQV---RTNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGE 695

Query: 379 YTCRAQTELDFIEAQATLTVQVPLEAPS---NFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
                        +  +  ++    APS   +          + +V+W P+S +   G  
Sbjct: 696 ------------PSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDG 743

Query: 436 RGYKVQ-------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
            GY +         W      G+  +  V   ES    V  + P      ++ ++N    
Sbjct: 744 FGYLLSFRRQGSTHWQTARVPGADAQYFVYSNES----VRPYTPFE---VKIRSYNRRGE 796

Query: 489 GPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKG 546
           GP S      + E  P    + + A  + SS   + W   +Q  NG+L+GY+I+Y     
Sbjct: 797 GPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGILLGYEIRYWKAGD 856

Query: 547 TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPD 606
            +      R   +     TSA+++GL P+TKY + +  Y +AG G  S        K P 
Sbjct: 857 KEAAADRVRTAGLD----TSARVSGLHPNTKYHVTVRAYNRAGTGPASPSANATTMKPPP 912

Query: 607 NVEGRGSTPNNLVISWT 623
                   P N  ISWT
Sbjct: 913 R-----RPPGN--ISWT 922



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 114/300 (38%), Gaps = 34/300 (11%)

Query: 125 APYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P F  +P    F   + EE V   C+A   P     W  NG  +   P +  + VG N 
Sbjct: 36  GPVFEDQPLSVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNL 95

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTC 240
           + +   +  D G Y C A+N +G V     +       E ++  +D   T +G  V+L C
Sbjct: 96  VIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKTHEGWGVMLPC 155

Query: 241 RVFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGT 295
                 P     W+ N+      T GR+ + + TG+L I     +D G Y+C A + +  
Sbjct: 156 NPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDF 215

Query: 296 AQGSGSLTVKEHTHITDQPEDYEVEA---------------GQSATFRCNAVSDPSLKLS 340
           +  S      +   +    ED  + A               GQ  T  C A  +P  +  
Sbjct: 216 STKS---VFSKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPR-- 270

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +    +D    P++  + + +L +   S  D G Y C A+        Q  + VQ 
Sbjct: 271 IKWRK----VDGSLSPQWTTA-EPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQA 325


>gi|348539552|ref|XP_003457253.1| PREDICTED: LOW QUALITY PROTEIN: peroxidasin-like [Oreochromis
           niloticus]
          Length = 1462

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 178/360 (49%), Gaps = 17/360 (4%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSD--RISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           V   C   G P PQ IW ++   +N  D  R++    G +L+I++   +DQG Y C   N
Sbjct: 251 VYFTCRAEGNPKPQIIWLRNNNALNMRDDSRLNLLEDG-TLMIQNTRETDQGVYQCMAKN 309

Query: 109 GVGEAKSYSIDLSVLAA---PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             GE K+  + L    A   P F ++P+       E+VT EC A+G P+P + W    + 
Sbjct: 310 VAGEVKTSEVTLRYFGAPSRPSFVIQPQNTEVLVGESVTLECSATGQPQPRVSWTKGDR- 368

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            +  P + R  + P+  + I+N+ ++D G Y C A+N++  ++   ++ V A  P+ T A
Sbjct: 369 -TPLPNDARITITPSGGLYIQNVEQADGGQYTCFASNNVDTIHATAHIIVQA-IPQFTVA 426

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSG 283
           P+D+  ++G TV   C   G P+P + W      L +  R+ IL +G L+IT VA  D G
Sbjct: 427 PQDQLALEGHTVDFPCEATGYPQPVIAWTRGGSPLPSDRRHVILPSGTLRITRVAAHDEG 486

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +Y C A + +GT + +  L++++      T+ P D  VE+GQ     C+A   P   L+ 
Sbjct: 487 QYECQAVSPVGTTRTAVQLSIQQRVTPVFTNAPRDLTVESGQDVQIPCSAQGQPQPVLT- 545

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            W    + +      +F  S +  L V      D+G+Y C A+  + +  A   LTV VP
Sbjct: 546 -W--NKDGVQVTESGKFHISPEGYLEVKDVGTADAGRYECVARNPIGYQVASMVLTVTVP 602



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/266 (35%), Positives = 131/266 (49%), Gaps = 15/266 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           L  + V L C   G P P+  W+K D  P+    RI+    G  L I++VE +D G YTC
Sbjct: 342 LVGESVTLECSATGQPQPRVSWTKGDRTPLPNDARITITPSG-GLYIQNVEQADGGQYTC 400

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
             SN V    + +  + V A P FTV P+   A E  TV F C+A+G P+P I W   G 
Sbjct: 401 FASNNVDTIHA-TAHIIVQAIPQFTVAPQDQLALEGHTVDFPCEATGYPQPVIAWTRGGS 459

Query: 165 PISQAPPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA-P 219
           P+    P+ RR V    G  RIT   +   D G Y C A + +G     V +++     P
Sbjct: 460 PL----PSDRRHVILPSGTLRIT--RVAAHDEGQYECQAVSPVGTTRTAVQLSIQQRVTP 513

Query: 220 EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVA 278
             T AP+D     G+ V + C   G P+P + W  +  ++T  G++ I   G L++ DV 
Sbjct: 514 VFTNAPRDLTVESGQDVQIPCSAQGQPQPVLTWNKDGVQVTESGKFHISPEGYLEVKDVG 573

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTV 304
            AD+G Y C ARN +G    S  LTV
Sbjct: 574 TADAGRYECVARNPIGYQVASMVLTV 599



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 141/318 (44%), Gaps = 23/318 (7%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T EP  ++     TV F C+A G P+P+I W+ N   ++    +    +    + I+
Sbjct: 234 PRITSEPHDVDVTSGNTVYFTCRAEGNPKPQIIWLRNNNALNMRDDSRLNLLEDGTLMIQ 293

Query: 186 NLRKSDTGNYGCNATNSLGYV-YKDVYVNVLA--HAPEITEAPKDEYTVDGKTVVLTCRV 242
           N R++D G Y C A N  G V   +V +        P     P++   + G++V L C  
Sbjct: 294 NTRETDQGVYQCMAKNVAGEVKTSEVTLRYFGAPSRPSFVIQPQNTEVLVGESVTLECSA 353

Query: 243 FGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSG 300
            G P+P V+W    +       R TI  +G L I +V  AD G+YTCFA N + T   + 
Sbjct: 354 TGQPQPRVSWTKGDRTPLPNDARITITPSGGLYIQNVEQADGGQYTCFASNNVDTIHATA 413

Query: 301 SLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQ 360
            + V+     T  P+D     G +  F C A   P  +  I W RG  P+   S+ R V 
Sbjct: 414 HIIVQAIPQFTVAPQDQLALEGHTVDFPCEATGYP--QPVIAWTRGGSPL--PSDRRHVI 469

Query: 361 SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVID 415
               +L +T+ +  D GQY C+A + +        L++Q     V   AP + T+    D
Sbjct: 470 LPSGTLRITRVAAHDEGQYECQAVSPVGTTRTAVQLSIQQRVTPVFTNAPRDLTVESGQD 529

Query: 416 AK---------KAVVSWN 424
            +         + V++WN
Sbjct: 530 VQIPCSAQGQPQPVLTWN 547



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 8/180 (4%)

Query: 38  VTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           V  + ++AL    V+  C   G P P   W++ G P+ PSDR        +L I  V   
Sbjct: 425 VAPQDQLALEGHTVDFPCEATGYPQPVIAWTRGGSPL-PSDRRHVILPSGTLRITRVAAH 483

Query: 98  DQGSYTCEVSNGVGEAKSYSIDLSV--LAAPYFTVEPEFINAAEEETVTFECKASGLPEP 155
           D+G Y C+  + VG  ++ ++ LS+     P FT  P  +     + V   C A G P+P
Sbjct: 484 DEGQYECQAVSPVGTTRT-AVQLSIQQRVTPVFTNAPRDLTVESGQDVQIPCSAQGQPQP 542

Query: 156 EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
            + W  +G  ++++    +  + P   + ++++  +D G Y C A N +GY    + + V
Sbjct: 543 VLTWNKDGVQVTES---GKFHISPEGYLEVKDVGTADAGRYECVARNPIGYQVASMVLTV 599


>gi|410964137|ref|XP_003988612.1| PREDICTED: contactin-1 isoform 3 [Felis catus]
 gi|410964139|ref|XP_003988613.1| PREDICTED: contactin-1 isoform 4 [Felis catus]
          Length = 627

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 176/378 (46%), Gaps = 28/378 (7%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 241 PADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 298

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G+Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 299 NIQLEDEGTYECEAENNRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 354

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 355 TGKPIPTIRWLKNGYAYHKG------ELRLYDVTFEN-----AGMYQCIAENTHGAIYAN 403

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 404 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 463

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 464 WEDGSLEINNITRNDGGIYTCFAENNRGRANNTGTLVITDPTRIILAPINADITVGENAT 523

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ +W      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 524 MQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 583

Query: 382 RAQTELDFIEAQATLTVQ 399
            AQT +D   A A L V+
Sbjct: 584 TAQTIVDNSSASADLVVR 601



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 154/378 (40%), Gaps = 34/378 (8%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 189 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTKPYPADIVV 246

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  I A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 247 QFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 303

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N+ G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 304 DEGTYECEAENNRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 362

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 363 RWLKN-----GYAY---HKGELRLYDVTFENAGMYQCIAENTHGAIYANAELKILALAPT 414

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   D SL 
Sbjct: 415 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 470

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC A+          TL +  P   + AP N  +    +A  +   S+
Sbjct: 471 INNITRNDGGIYTCFAENNRGRANNTGTLVITDPTRIILAPINADITVGENATMQCAASF 530

Query: 424 NPVSPQSLRGHFRGYKVQ 441
           +P    +    F GY + 
Sbjct: 531 DPALDLTFIWSFNGYVID 548



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 140/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   I+  SDR S    G +L+I + +   D G Y C  S
Sbjct: 60  KVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 117

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 118 NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 171

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 172 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 228

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 229 LIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 288

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 289 STSGAVLKIFNIQLEDEGTYECEAENNRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 348

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+       + E R      Y +T       ++G Y C A+ 
Sbjct: 349 YWPCVATGKPI--PTIRWLKNGYAYH-KGELRL-----YDVTFE-----NAGMYQCIAEN 395

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 396 THGAIYANAELKI 408



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   I     +    VG N +   
Sbjct: 47  PINTIYPE---ESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTS-DRYSMVGGNLVINN 102

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   +
Sbjct: 103 PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 162

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 163 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 222

Query: 299 SGSL---------TVKEH-THITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                        T K +   I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 223 FSKFIPLIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPV--PDIRWRKVLE 280

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 281 PMPSTAE---ISTSGAVLKIFNIQLEDEGTYECEAENNRGKDKHQARIYVQ 328


>gi|6680954|ref|NP_031753.1| contactin-1 precursor [Mus musculus]
 gi|227497224|ref|NP_001153119.1| contactin-1 precursor [Mus musculus]
 gi|227497226|ref|NP_001153120.1| contactin-1 precursor [Mus musculus]
 gi|116918|sp|P12960.1|CNTN1_MOUSE RecName: Full=Contactin-1; AltName: Full=Neural cell surface
           protein F3; Flags: Precursor
 gi|50938|emb|CAA33075.1| F3 preprotein (AA -20 to 1000) [Mus musculus]
          Length = 1020

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 156/581 (26%), Positives = 245/581 (42%), Gaps = 42/581 (7%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K    +  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 241 PADIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 298

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 299 NIQLEDEGLYECEAENIRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCIA 354

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 355 TGKPIPTIRWLKNGYSYHKG------ELRLYDVTFEN-----AGMYQCIAENAYGSIYAN 403

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 404 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 463

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L +   T I   P + ++  G++AT
Sbjct: 464 WEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITNPTRIILAPINADITVGENAT 523

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-------PRFVQSNDYSLTVTKSSELDSGQY 379
            +C A  DP+L L+ VW      IDF  E         F+   +  L +  +    +G+Y
Sbjct: 524 MQCAASFDPALDLTFVWSFNGYVIDFNKEITHIHYQRNFMLDANGELLIRNAQLKHAGRY 583

Query: 380 TCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYK 439
           TC AQT +D   A A L V+ P   P     I+ I A    ++W+  S          Y 
Sbjct: 584 TCTAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYT 640

Query: 440 VQTWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
           +QT T    D + +  +  + +G   + +    +P  +   RV+A N    G PS   + 
Sbjct: 641 IQTKTILSDDWKDAKTDPPIIEGNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSNR 700

Query: 498 VTPEGVPGTVQSLEAIPLGSS--AFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
           +  +G    V   +    G +     + W  +  E   G   GY + ++   G +   + 
Sbjct: 701 IKTDGAAPNVAPSDVGGGGGTNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT 760

Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
              P   D      K   + PST +++ +  +   GDG  S
Sbjct: 761 VTNP---DTGRYVHKDETMTPSTAFQVKVKAFNNKGDGPYS 798



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 149/646 (23%), Positives = 243/646 (37%), Gaps = 61/646 (9%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 189 VSQTN--GNLYIANVESSDRGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVV 246

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  I     + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 247 QFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 303

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N  G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 304 DEGLYECEAENIRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCIATGKPIPTI 362

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G+   +  L +      
Sbjct: 363 RWLKN-----GYSY---HKGELRLYDVTFENAGMYQCIAENAYGSIYANAELKILALAPT 414

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   D SL 
Sbjct: 415 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 470

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC A+       +  TL +  P   + AP N  +    +A  +   S+
Sbjct: 471 INNITRNDGGIYTCFAENNRGKANSTGTLVITNPTRIILAPINADITVGENATMQCAASF 530

Query: 424 NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAF 483
           +P    +    F GY +    E       R  +++          +   A +        
Sbjct: 531 DPALDLTFVWSFNGYVIDFNKEITHIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTI 590

Query: 484 NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQS 543
               +     ++           ++ + A     ++  L W +    +  +  Y I+ ++
Sbjct: 591 VDNSSASADLVVRGPPGPPGGLRIEDIRA-----TSVALTWSRGSDNHSPISKYTIQTKT 645

Query: 544 V-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES---- 594
           +     K  K  P     P I +    SAK   L P  +Y   +      G G  S    
Sbjct: 646 ILSDDWKDAKTDP-----PII-EGNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSN 699

Query: 595 --KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
             K     P   P +V G G T   L I+W  +    H   +F Y + ++  + GE W +
Sbjct: 700 RIKTDGAAPNVAPSDVGGGGGTNRELTITWAPLSREYHYGNNFGYIVAFKPFD-GEEWKK 758

Query: 653 DDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
             V +      V  ++ T  P   +++KV     + DG  S+  +I
Sbjct: 759 VTVTNPDTGRYVHKDE-TMTPSTAFQVKVKAFNNKGDGPYSLVAVI 803



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 141/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   ++  +DR S    G +L+I + +   D G Y C  S
Sbjct: 60  KVSLNCRARASPFPVYKWRMNNGDVDLTNDRYSM--VGGNLVINNPDKQKDAGVYYCLAS 117

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 118 NNYGMVRSTEATLSFGYLDPFPPEERPEVKVKEGKGMVLLC------DPPYHFPDDLSYR 171

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 172 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSP--SITKSVFSKFIP 228

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD YT+ G+ V L C   G P P++ W    + +      
Sbjct: 229 LIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 288

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 289 STSGAVLKIFNIQLEDEGLYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 348

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+       + E R      Y +T       ++G Y C A+ 
Sbjct: 349 YWPCIATGKPI--PTIRWLKNGYSY-HKGELRL-----YDVTFE-----NAGMYQCIAEN 395

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 396 AYGSIYANAELKI 408



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 111/292 (38%), Gaps = 28/292 (9%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPR-RKVGPNRITI 184
           P  T+ PE    + E  V+  C+A   P P   W  N   +     N R   VG N +  
Sbjct: 47  PINTIYPE---ESLEGKVSLNCRARASPFPVYKWRMNNGDVDLT--NDRYSMVGGNLVIN 101

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV- 242
              ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   
Sbjct: 102 NPDKQKDAGVYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVKVKEGKGMVLLCDPP 161

Query: 243 FGAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQ 297
           +  P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T  
Sbjct: 162 YHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSPSITKS 221

Query: 298 GSGSLT----VKEHT------HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS 347
                     + E T       I  Q +D     GQ+ T  C A+ +P     I W +  
Sbjct: 222 VFSKFIPLIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNPV--PDIRWRKVL 279

Query: 348 EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           EP+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 280 EPMPSTAE---ISTSGAVLKIFNIQLEDEGLYECEAENIRGKDKHQARIYVQ 328



 Score = 40.8 bits (94), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+    ++V+ + +  V W  V    L      Y+++ W   D E +   + V   
Sbjct: 810 PSEAPTEVG-VKVLSSSEISVHWKHV----LEKIVESYQIRYWAGHDKEAAAHRVQVTSQ 864

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GP S++I   T +  P     + +     S +
Sbjct: 865 E-YSARLENLLPDTQYFIEVGACNSAGCGPSSDVIETFTRKAPPSQPPRIISSVRSGSRY 923

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYKI Y+
Sbjct: 924 IITWDHVVALSNESTVTGYKILYR 947


>gi|402857489|ref|XP_003893286.1| PREDICTED: contactin-2 [Papio anubis]
          Length = 1040

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 165/623 (26%), Positives = 266/623 (42%), Gaps = 45/623 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWTTAE----PTLQIPSVSFEDEGTYEC 306

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           E  N  G   +    + V A P +        A     + + C A+G P P + W+ NG+
Sbjct: 307 EAENSKGR-DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGE 365

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           P++      R +V    +    L   D+G Y C A N  G +Y    + V A AP+    
Sbjct: 366 PLAS---QNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLN 422

Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           P         G  +V+ C+   APK  V W    + L    R T+   G L I +++ +D
Sbjct: 423 PVRRLIPAARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSD 482

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP++ L+ 
Sbjct: 483 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTF 542

Query: 342 VWLRGSEPIDFESEPRFVQSNDY-----SLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W     PIDF+      +  +       LT+  +     G+YTC AQT +D    +AT+
Sbjct: 543 TWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATV 602

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GSIR 453
            V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G+   +R
Sbjct: 603 LVRGPPGPPGGVVVRDIGDTTIQ-LSWS----RGFDNHSPIAKYTLQARTPPAGKWKQVR 657

Query: 454 ELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGVPGTVQ 508
               N +G + T +V    P      RV+A N    G  +GP S+I    T E  P    
Sbjct: 658 TNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKI---RTKEAAPSVAP 714

Query: 509 SLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565
           S  +   G+     + W  +  E  NG   GY + ++    T       R+P  +D    
Sbjct: 715 SGLSGGGGAPGELIVSWTPMSREYQNGDGFGYLLSFRRQGSTHWQ--TARVPG-ADAQYF 771

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGSTPNNLVI 620
                 + P T + + +  Y + G+G ES   L Y     P   P  V  +G + + + +
Sbjct: 772 VYSNESVRPYTPFEVKIRSYNRRGEGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNV 831

Query: 621 SWTAMPEIEHNAPHFKYRI-FWR 642
           +W  + + + N     Y I +W+
Sbjct: 832 TWEPVQQ-DMNGILLGYEIRYWK 853



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 150/375 (40%), Gaps = 38/375 (10%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           ++V L C    +P     W  +G  + + P  R  Q   G  +I+   +  D G Y C  
Sbjct: 55  EQVLLACRARASPPATYRWKMNGTEMKLEPGSR-HQLVGGNLVIMNPTKAQDAGVYQCLA 113

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIH------- 158
           SN VG   S    L       F    EF     +   T E     LP  P  H       
Sbjct: 114 SNPVGTVVSREAILR------FGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYR 167

Query: 159 WVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY----- 211
           W+ N  P +  P + R  V      + I     SD GNY C AT+ + +  K V+     
Sbjct: 168 WLLNEFP-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQ 226

Query: 212 VNVLAH-----APEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           +N+ A      AP I    P + Y + G+ V L C  FG P P + W      L+  ++T
Sbjct: 227 LNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-PQWT 285

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
             E   L+I  V+F D G Y C A N  G     G + V+          D E + G + 
Sbjct: 286 TAEP-TLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNL 344

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P  + ++ WLR  EP+  ++    +  +   L  +K S  DSG Y C A+ 
Sbjct: 345 RWGCAAAGKP--RPTVRWLRNGEPLASQNRVEVLAGD---LRFSKLSLEDSGMYQCVAEN 399

Query: 386 ELDFIEAQATLTVQV 400
           +   I A A L VQ 
Sbjct: 400 KHGTIYASAELAVQA 414



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 140/607 (23%), Positives = 226/607 (37%), Gaps = 88/607 (14%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P+   +R+        L    +   D G Y C   N  G   
Sbjct: 348 CAAAGKPRPTVRWLRNGEPLASQNRVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTIY 405

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F + P    I AA    +   C+    P+  + W    + +  +  
Sbjct: 406 A-SAELAVQALAPDFRLNPVRRLIPAARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSS- 463

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V P+  + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 464 --RVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 520

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G  + L C     P  ++ +     +        GG Y    + ET GDL I +    
Sbjct: 521 NLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLR 580

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS---------------- 324
             G+YTC A+  + +A  S   TV               + G +                
Sbjct: 581 HGGKYTCMAQTVVDSA--SKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPI 638

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQ 378
           A +   A + P+ K   V    + P + E      Q        DY   V  S+ L +G+
Sbjct: 639 AKYTLQARTPPAGKWKQV---RTNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGE 695

Query: 379 YTCRAQTELDFIEAQATLTVQVPLEAPS---NFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
                        +  +  ++    APS   +          + +VSW P+S +   G  
Sbjct: 696 ------------PSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELIVSWTPMSREYQNGDG 743

Query: 436 RGYKVQ-------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
            GY +         W      G+  +  V   ES    V  + P      ++ ++N    
Sbjct: 744 FGYLLSFRRQGSTHWQTARVPGADAQYFVYSNES----VRPYTPFE---VKIRSYNRRGE 796

Query: 489 GPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKG 546
           GP S      + E  P    + + A  + SS   + W   +Q  NG+L+GY+I+Y     
Sbjct: 797 GPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGILLGYEIRYWKAGD 856

Query: 547 TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-----AESKYLFYVP 601
            +      R   +     TSA+++GL P+TKY + +  Y +AG G     A +  +   P
Sbjct: 857 KEAAADRVRTAGLD----TSARVSGLHPNTKYHVTVRAYNRAGTGPASPSANATTMKPPP 912

Query: 602 FKNPDNV 608
            + PDN+
Sbjct: 913 RRPPDNI 919



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 150/654 (22%), Positives = 237/654 (36%), Gaps = 75/654 (11%)

Query: 88  SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
           +L I     SD G+Y+C      + S     +K   ++L+     L AP      P    
Sbjct: 191 NLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDTRLFAPSIKARFPAETY 250

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + VT EC A G P P I W      +S     P+       + I ++   D G Y 
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-----PQWTTAEPTLQIPSVSFEDEGTYE 305

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V A  PE  +   D     G  +   C   G P+P V W+ N 
Sbjct: 306 CEAENSKGRDTVQGRIIVQAQ-PEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNG 364

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
           + L       +  GDL+ + ++  DSG Y C A NK GT   S  L V+         P 
Sbjct: 365 EPLASQNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPV 424

Query: 316 DYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
              + A  G      C   + P  K  ++W +G+E +   S  R   + D +L +   S 
Sbjct: 425 RRLIPAARGGEIVIPCQPRAAP--KAVVLWSKGTEILVNSS--RVTVTPDGTLIIRNISR 480

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APS--------NFTLIQVIDAKKAVV- 421
            D G+YTC A+  +    +   L+V+   +   APS        N TL Q   +    + 
Sbjct: 481 SDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTL-QCHASHDPTMD 539

Query: 422 ---SWN----PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
              +W     P+      GH+R   V+   E  G+ +I    +  G   T      V ++
Sbjct: 540 LTFTWTLDDFPIDFDKPGGHYRRTNVK---ETIGDLTILNAQLRHGGKYTCMAQTVVDSA 596

Query: 475 KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
              A VL                            +    +G +   L W +    +  +
Sbjct: 597 SKEATVLVRGPPG------------------PPGGVVVRDIGDTTIQLSWSRGFDNHSPI 638

Query: 535 MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
             Y ++ ++    K   +    P   +    +A++ GL P   Y   +      G G  S
Sbjct: 639 AKYTLQARTPPAGKWKQVRTN-PANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPS 697

Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
                 +     P   P  + G G  P  L++SWT M     N   F Y + +RR  +  
Sbjct: 698 GPSSKIRTKEAAPSVAPSGLSGGGGAPGELIVSWTPMSREYQNGDGFGYLLSFRRQGSTH 757

Query: 649 AWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
            W    V        V +N+    + P+E+K+       +G  S+  L+ +  E
Sbjct: 758 -WQTARVPGADAQYFVYSNESVRPYTPFEVKIRSYNRRGEGPESLTALVYSAEE 810



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 114/300 (38%), Gaps = 34/300 (11%)

Query: 125 APYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P F  +P    F   + EE V   C+A   P     W  NG  +   P +  + VG N 
Sbjct: 36  GPVFEDQPLSVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNL 95

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTC 240
           + +   +  D G Y C A+N +G V     +       E ++  +D   T +G  V+L C
Sbjct: 96  VIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKTHEGWGVMLPC 155

Query: 241 RVFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGT 295
                 P     W+ N+      T GR+ + + TG+L I     +D G Y+C A + +  
Sbjct: 156 NPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDF 215

Query: 296 AQGSGSLTVKEHTHITDQPEDYEVEA---------------GQSATFRCNAVSDPSLKLS 340
           +  S      +   +    ED  + A               GQ  T  C A  +P  +  
Sbjct: 216 STKS---VFSKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPR-- 270

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +    +D    P++  + + +L +   S  D G Y C A+        Q  + VQ 
Sbjct: 271 IKWRK----VDGSLSPQWTTA-EPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQA 325


>gi|410951589|ref|XP_003982477.1| PREDICTED: LOW QUALITY PROTEIN: contactin-6-like [Felis catus]
          Length = 1028

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 181/715 (25%), Positives = 301/715 (42%), Gaps = 76/715 (10%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    + S+      L I + +  D+G Y 
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGNPLPGKVKYSKSQ--AILEIPNFQQEDEGFYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G   +    L   A P +  + +    +  +++ +ECKASG P P   W+ NG
Sbjct: 297 CIAGNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDSLFWECKASGKPNPWYTWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++   P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 356 ERLT---PEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSK 412

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL-ETGDLKITDVAFA 280
            P  + +V   G  + + C+    P+  ++W    + L   +   L E G LKI +V  +
Sbjct: 413 NPLKKTSVVQVGGDITIECKPAAFPRAAISWKRGMESLRQSKRVFLSEDGSLKIYNVTRS 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A+ +GSL VKE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 473 DAGSYTCTATNQFGIAKNTGSLVVKERTVITIPPSKMDVTVGESIVLPCQVSHDPSIEVI 532

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            +W    + ID +       R    +   L +       SG+Y C  +T L+ + A A +
Sbjct: 533 FIWSFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAVADI 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW P S  +     + + VQ  T          ++
Sbjct: 593 IVRGPPGPPEDVR-VEHISSTTSQLSWRPGSDNN--SPIQIFTVQARTPFSVGWQAVSTV 649

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLE 511
            E++   G++    V    P  +   RV+A N    G PS+    + T   VP    +  
Sbjct: 650 PEIL--NGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTNI 707

Query: 512 AIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
               GS S   + W  +  E  NG   GY I  + V  T      ER+P + + +    +
Sbjct: 708 NGGGGSRSELVITWESIPEELQNGEEFGYIIMLRPVGSTTWTK--ERVPSV-ESSRFVYR 764

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS-----TPNNLVISWT 623
              + P + + + +  Y   G+G+ S        ++   +  RG+     + + + +SW 
Sbjct: 765 NESITPLSPFEVKVGVYNNEGEGSLSTVSIVYSGEDEPQLAPRGTSVQSFSASEMEVSWN 824

Query: 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWT 683
           A+                       AWN       R +  VL        YE   V  WT
Sbjct: 825 AI-----------------------AWN-------RNTGRVLG-------YE---VLYWT 844

Query: 684 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           +   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S  ++  T
Sbjct: 845 DDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGAGPSSPPVNVTT 898



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 166/660 (25%), Positives = 255/660 (38%), Gaps = 87/660 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC V+N   EA+      SV   P   V+                
Sbjct: 180 NLYIAKVEPSDVGNYTCFVTN--KEAQR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 232

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ +V  EC A G P P+I W   +G P+   P   +       + I N ++
Sbjct: 233 FPETIQAAKDSSVKLECFALGNPVPDISWRRLDGNPL---PGKVKYSKSQAILEIPNFQQ 289

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A N  G       + +    PE  +  ++ Y     ++   C+  G P P 
Sbjct: 290 EDEGFYECIAGNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDSLFWECKASGKPNPW 348

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + LT      +E G L IT +  +DSG Y C A NK      +  L V     
Sbjct: 349 YTWLKNGERLTPEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAP 408

Query: 309 HITDQP--EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P  +   V+ G   T  C   + P  + +I W RG E        R   S D SL
Sbjct: 409 DFSKNPLKKTSVVQVGGDITIECKPAAFP--RAAISWKRGME--SLRQSKRVFLSEDGSL 464

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV------ 420
            +   +  D+G YTC A  +    +   +L V+         T+I +  +K  V      
Sbjct: 465 KIYNVTRSDAGSYTCTATNQFGIAKNTGSLVVK-------ERTVITIPPSKMDVTVGESI 517

Query: 421 -----VSWNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKF 470
                VS +P         F G  +         E+ G  S+ +L++   +       K+
Sbjct: 518 VLPCQVSHDPSIEVIFIWSFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQ--LNHSGKY 575

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
           +   K     L+            ++ +   G PG  + +    + S+   L W      
Sbjct: 576 LCTVKTTLESLS-----------AVADIIVRGPPGPPEDVRVEHISSTTSQLSWRPGSDN 624

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           N  +  + +  Q+     VG   +  +P I +  T +A + GL P  +Y   +      G
Sbjct: 625 NSPIQIFTV--QARTPFSVGWQAVSTVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIG 682

Query: 590 DGAESKY------LFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  SK          VP   P N+ G G + + LVI+W ++PE   N   F Y I  R 
Sbjct: 683 IGEPSKASELLRTKASVPVVAPTNINGGGGSRSELVITWESIPEELQNGEEFGYIIMLRP 742

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
             +   W ++ V     S  V  N+      P+E+KV       +GEGS+  + IV  GE
Sbjct: 743 VGS-TTWTKERVPSVESSRFVYRNESITPLSPFEVKV--GVYNNEGEGSLSTVSIVYSGE 799



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 154/638 (24%), Positives = 250/638 (39%), Gaps = 79/638 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  + P +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 339 CKASGKPNPWYTWLKNGERLTPEERIQIEN--GTLIITMLNVSDSGVYQCAAENKY-QII 395

Query: 115 SYSIDLSVLA-APYFTVEPEFINAAEE--ETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
             + +L VLA AP F+  P    +  +    +T ECK +  P   I W    + + Q+  
Sbjct: 396 YANAELRVLASAPDFSKNPLKKTSVVQVGGDITIECKPAAFPRAAISWKRGMESLRQSKR 455

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
               + G   + I N+ +SD G+Y C ATN  G + K+    V+     IT  P      
Sbjct: 456 VFLSEDG--SLKIYNVTRSDAGSYTCTATNQFG-IAKNTGSLVVKERTVITIPPSKMDVT 512

Query: 232 DGKTVVLTCRVFGAPKPEVNWIHN-------------QKELTGGRYTILETGDLKITDVA 278
            G+++VL C+V   P  EV +I +               E  GG       GDL I ++ 
Sbjct: 513 VGESIVLPCQVSHDPSIEVIFIWSFNGDVIDLKKGVAHFERIGGE----SVGDLMIRNIQ 568

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSDPS 336
              SG+Y C  +  L +      + V+        PED  VE   S T + +    SD +
Sbjct: 569 LNHSGKYLCTVKTTLESLSAVADIIVRGPP---GPPEDVRVEHISSTTSQLSWRPGSDNN 625

Query: 337 LKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
             + I  ++   P         + P  +    Y+ TV   S     ++   A   +   E
Sbjct: 626 SPIQIFTVQARTPFSVGWQAVSTVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGE 685

Query: 392 ---AQATLTVQ--VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ----- 441
              A   L  +  VP+ AP+N          + V++W  +  +   G   GY +      
Sbjct: 686 PSKASELLRTKASVPVVAPTNINGGGG-SRSELVITWESIPEELQNGEEFGYIIMLRPVG 744

Query: 442 --TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
             TWT++          V + ES T       P S    +V  +N    G  S +    +
Sbjct: 745 STTWTKERVPSVESSRFVYRNESIT-------PLSPFEVKVGVYNNEGEGSLSTVSIVYS 797

Query: 500 PEGVP------GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKVGP 551
            E  P       +VQS  A  +  S   + W    +  G ++GY++ Y     K + +G 
Sbjct: 798 GEDEPQLAPRGTSVQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDSKESMIGK 854

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPD 606
           +      +S   TT   + GL+ +T Y   +  Y  AG G  S  +        P + P 
Sbjct: 855 I-----RVSGNVTTK-NITGLKANTIYFASVRAYNTAGAGPSSPPVNVTTKKSPPSQPPA 908

Query: 607 NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           N+  +  T + L ++W  +  +E+ +    Y+I +R++
Sbjct: 909 NIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQN 945



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 106/288 (36%), Gaps = 36/288 (12%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L+ P FT EP+   F     +  +   C A+G P P   W  NG  I        R   
Sbjct: 22  LLSRPVFTQEPQDIXFPLDLSKSEIILNCAATGYPSPSYRWKQNGTDIDFTMSYHYRLDE 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N          D G Y C ATN+LG +         A+  +     +   +V +G+ VV
Sbjct: 82  GNLAISSPRTDQDIGMYQCLATNTLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        W  N   L       R+   ETG+L I  V  +D G YTCF
Sbjct: 142 LLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCF 197

Query: 289 ARNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSL 337
             NK    + QG  +  V+    +  +         PE  +     S    C A+ +P  
Sbjct: 198 VTNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQ--SNDYSLTVTKSSELDSGQYTCRA 383
            +S  W R    +D    P  V+   +   L +    + D G Y C A
Sbjct: 258 DIS--WRR----LDGNPLPGKVKYSKSQAILEIPNFQQEDEGFYECIA 299



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 117/497 (23%), Positives = 178/497 (35%), Gaps = 76/497 (15%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSD----RISQGNYGKSLIIKHVEFSDQGS 101
           L   ++ L C   G P P   W ++G  I+ +     R+ +GN     I       D G 
Sbjct: 41  LSKSEIILNCAATGYPSPSYRWKQNGTDIDFTMSYHYRLDEGNLA---ISSPRTDQDIGM 97

Query: 102 YTCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPEI--- 157
           Y C  +N +G   S    L       F T     ++  E + V   C     P P     
Sbjct: 98  YQCLATNTLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCG----PPPHFGDL 153

Query: 158 --HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY-------- 205
              W  N  P+     N RR V      + I  +  SD GNY C  TN            
Sbjct: 154 SYAWTFNDNPLYVQEDN-RRFVSQETGNLYIAKVEPSDVGNYTCFVTNKEAQRSVQGPPT 212

Query: 206 --------VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQ 256
                   V  +    +    PE  +A KD       +V L C   G P P+++W   + 
Sbjct: 213 PLVQRTDGVMGEYEPKIEVRFPETIQAAKD------SSVKLECFALGNPVPDISWRRLDG 266

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
             L G          L+I +    D G Y C A N  G     G L          + ++
Sbjct: 267 NPLPGKVKYSKSQAILEIPNFQQEDEGFYECIAGNLRGRNLAKGQLIFYAPPEWEQKIQN 326

Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
             +    S  + C A   P+   +  WL+  E +  E     +Q  + +L +T  +  DS
Sbjct: 327 TYLSIYDSLFWECKASGKPNPWYT--WLKNGERLTPEER---IQIENGTLIITMLNVSDS 381

Query: 377 GQYTCRAQTELDFIEAQATLTVQVPLEAPSNF--------TLIQV-----IDAK-----K 418
           G Y C A+ +   I A A L V   L +  +F        +++QV     I+ K     +
Sbjct: 382 GVYQCAAENKYQIIYANAELRV---LASAPDFSKNPLKKTSVVQVGGDITIECKPAAFPR 438

Query: 419 AVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI-VNKGESTTTEVDKFVPASKNF 477
           A +SW     +SLR   R      +  +DG   I  +   + G  T T  ++F  A    
Sbjct: 439 AAISWKR-GMESLRQSKR-----VFLSEDGSLKIYNVTRSDAGSYTCTATNQFGIAKNTG 492

Query: 478 ARVLAFNGAYNGPPSEI 494
           + V+        PPS++
Sbjct: 493 SLVVKERTVITIPPSKM 509



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 106/242 (43%), Gaps = 17/242 (7%)

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDA 416
           RFV  N+ S+T     E+  G Y    +  L  +    +   + P  AP   T +Q   A
Sbjct: 760 RFVYRNE-SITPLSPFEVKVGVYNNEGEGSLSTVSIVYSGEDE-PQLAPRG-TSVQSFSA 816

Query: 417 KKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
            +  VSWN ++     G   GY+V  WT+   E  I ++ V+ G  TT  +      +  
Sbjct: 817 SEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVS-GNVTTKNITGLKANTIY 875

Query: 477 FARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVL 534
           FA V A+N A  GP S  ++  T +  P    +  A  L +S   L W  VK  +    +
Sbjct: 876 FASVRAYNTAGAGPSSPPVNVTTKKSPPSQPPANIAWKLTNSKLCLNWEHVKTMENESEV 935

Query: 535 MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGYTKAGDGAE 593
           +GYKI Y+  + +K         +I +   TSA+L  L P    Y I +   +  GDG+ 
Sbjct: 936 LGYKILYRQNRQSKT--------HILETNNTSAEL--LVPFEEDYLIEIRTVSDGGDGSS 985

Query: 594 SK 595
           S+
Sbjct: 986 SE 987


>gi|354478507|ref|XP_003501456.1| PREDICTED: peroxidasin homolog [Cricetulus griseus]
 gi|344248806|gb|EGW04910.1| Peroxidasin-like [Cricetulus griseus]
          Length = 1475

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 180/360 (50%), Gaps = 17/360 (4%)

Query: 51  VELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           V   C   G P P+ IW ++   + +    R++  + G +L+I++ + +D+G Y C   N
Sbjct: 260 VYFTCRAEGNPKPEIIWLRNNNELSMKTDSRLNLLDDG-TLMIQNTQEADEGVYQCMAKN 318

Query: 109 GVGEAKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             GEAK++ + L  L   A P F ++P+       E+VT EC A+G P P+I W    + 
Sbjct: 319 VAGEAKTHEVTLRYLGSPARPTFVIQPQNTEVLVGESVTLECSATGHPLPQITWTRGDR- 377

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            +  P +PR  + P+  + I+N+ +SD+G Y C A+NS+  ++   ++ V A  P+ T  
Sbjct: 378 -TPLPTDPRVTITPSGGLYIQNVEQSDSGEYTCFASNSVDSIHATAFIIVQA-LPQFTVT 435

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSG 283
           P+    ++G+TV   C   G P+P + W     +L+   R+ +L +G L+I+ VA  D G
Sbjct: 436 PQSRVVIEGQTVDFQCEAKGYPQPVIAWTKGGSQLSVDRRHLVLSSGTLRISGVALHDQG 495

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +Y C A N +G+ +    LTV+          P D  VE G +    C++  +P  + +I
Sbjct: 496 QYECQAVNIIGSQKVVAHLTVQPRVTPVFASIPSDMTVEVGTNVQLPCSSQGEP--EPAI 553

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            W    + +      +F  S +  LT+      D+G+Y C A+  + +      L+V VP
Sbjct: 554 TW--NKDGVQVTESGKFHISPEGFLTINDVGTADAGRYECVARNTIGYSSVSMVLSVNVP 611



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/262 (34%), Positives = 123/262 (46%), Gaps = 7/262 (2%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           L  + V L C   G PLPQ  W++ D  P+    R++    G  L I++VE SD G YTC
Sbjct: 351 LVGESVTLECSATGHPLPQITWTRGDRTPLPTDPRVTITPSG-GLYIQNVEQSDSGEYTC 409

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
             SN V    + +  + V A P FTV P+     E +TV F+C+A G P+P I W   G 
Sbjct: 410 FASNSVDSIHATAF-IIVQALPQFTVTPQSRVVIEGQTVDFQCEAKGYPQPVIAWTKGGS 468

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA-PEITE 223
            +S    +     G  RI+   L   D G Y C A N +G      ++ V     P    
Sbjct: 469 QLSVDRRHLVLSSGTLRISGVALH--DQGQYECQAVNIIGSQKVVAHLTVQPRVTPVFAS 526

Query: 224 APKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADS 282
            P D     G  V L C   G P+P + W  +  ++T  G++ I   G L I DV  AD+
Sbjct: 527 IPSDMTVEVGTNVQLPCSSQGEPEPAITWNKDGVQVTESGKFHISPEGFLTINDVGTADA 586

Query: 283 GEYTCFARNKLGTAQGSGSLTV 304
           G Y C ARN +G +  S  L+V
Sbjct: 587 GRYECVARNTIGYSSVSMVLSV 608



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 137/308 (44%), Gaps = 11/308 (3%)

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAA--PYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           Q + TCE    +      +I    L    P  T EP+  +     TV F C+A G P+PE
Sbjct: 214 QAAATCEYPRRIQGRSVATITPEELNCERPRITSEPQDADVTSGNTVYFTCRAEGNPKPE 273

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV-YKDVYVNVL 215
           I W+ N   +S    +    +    + I+N +++D G Y C A N  G     +V +  L
Sbjct: 274 IIWLRNNNELSMKTDSRLNLLDDGTLMIQNTQEADEGVYQCMAKNVAGEAKTHEVTLRYL 333

Query: 216 AH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGD 271
                P     P++   + G++V L C   G P P++ W    +    T  R TI  +G 
Sbjct: 334 GSPARPTFVIQPQNTEVLVGESVTLECSATGHPLPQITWTRGDRTPLPTDPRVTITPSGG 393

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
           L I +V  +DSGEYTCFA N + +   +  + V+     T  P+   V  GQ+  F+C A
Sbjct: 394 LYIQNVEQSDSGEYTCFASNSVDSIHATAFIIVQALPQFTVTPQSRVVIEGQTVDFQCEA 453

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
              P  +  I W +G   +  +     + S   +L ++  +  D GQY C+A   +   +
Sbjct: 454 KGYP--QPVIAWTKGGSQLSVDRRHLVLSSG--TLRISGVALHDQGQYECQAVNIIGSQK 509

Query: 392 AQATLTVQ 399
             A LTVQ
Sbjct: 510 VVAHLTVQ 517


>gi|86565336|ref|NP_001033396.1| Protein SAX-7, isoform c [Caenorhabditis elegans]
 gi|62898585|dbj|BAD97388.1| SAX-7 LONGFORM [Caenorhabditis elegans]
 gi|351050586|emb|CCD65186.1| Protein SAX-7, isoform c [Caenorhabditis elegans]
          Length = 1331

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 207/430 (48%), Gaps = 33/430 (7%)

Query: 8   EYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIW 67
           +YK GN+  L  I      S  +  P +QYV +   +AL+  + +L C F G P P+  W
Sbjct: 229 DYKFGNQFSLQ-ITNNKRRSLQQMPPTEQYVNQSSPIALQGNQHKLHCFFSGYPAPKPRW 287

Query: 68  SKDGVPINPSDRISQG----NYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVL 123
             +G  I+  D  + G    +YGK+L+  +V     G Y C  +      +++++   V 
Sbjct: 288 FHNGREIS-EDSDAAGFRFESYGKTLVF-NVTQDKAGKYDCRFATQQDIDRTFNV--VVE 343

Query: 124 AAPYFTV-EPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
           AAPY+ +  P   N +E E V F+C   G P P++ +  NG  I ++  + R  +   R+
Sbjct: 344 AAPYWPLGPPPNTNTSEGEKVIFDCTTYGKPTPKVTFYKNGVEI-ESQKDDRYLIEGTRL 402

Query: 183 TIENLR-----KSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE--YTVDGKT 235
           TI +++     K D   Y C + N  G+++ + Y+N+LA  P++   P  E    V GK 
Sbjct: 403 TIFDVKKGTYGKGDNAVYQCKSENKHGWLWTNFYLNLLAFKPQLLIDPGKEEVEAVAGKK 462

Query: 236 VVLTCRVFGAPKPEVNW----IHNQK--ELTGGRYTILETGDLKITDVAFADSGEYTCFA 289
           V L C+ F +P   V W    I   K  ++    Y +   G L  ++V  A+ GEY C  
Sbjct: 463 VTLECKFFASPNAAVKWEAPMISGSKGNQIPADAYGV---GKLVFSEVTAAEEGEYECIG 519

Query: 290 RNKLGTAQGSGSLTVKEHTHITDQPEDYEVE-AGQSATFRCNAVSDPSLKLSIVWLRG-- 346
            NK G A G  +L V++ T +   P   EV  AG+     C+A +D  L++   WL    
Sbjct: 520 TNKYGQATGLITLKVRKPTIVQPFPRVEEVRMAGEEMRLACDATADNQLEVKYEWLVDGK 579

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-VPLEAP 405
           S P D  S   +   +D+SL ++  ++ D+ +Y C   T+LD +E +  +  + VP+   
Sbjct: 580 SLPEDRISSGHYKIDDDHSLVISNPTQDDTAKYKCVVSTKLDQVEKEIKIQFKDVPVAVH 639

Query: 406 SNFTLIQVID 415
           S +  +Q  D
Sbjct: 640 SAW--VQTCD 647



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 100/228 (43%), Gaps = 40/228 (17%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG----------- 448
            VP   PS   +++        ++WN V PQ+  G+F GYK+  W ++             
Sbjct: 861  VPSSIPSGLRVLEK-SGTTVTLAWNGVDPQTANGNFTGYKITYWVDEADQDSDDSSEDDE 919

Query: 449  -----------------EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                             +  IR+ +V    +T   +    PA+ N A +   NGA+ G  
Sbjct: 920  DDEKRKFRWKRSIRVKRQSGIRKTVVFGPSATQGTLTDLKPATLNHAYIQVTNGAHEGSA 979

Query: 492  SEIISFVTPEGVPGTVQSLEAIPLGSS------AFYLKWVKPEQPNGVLMGYKIKYQSVK 545
            S+ I F T EGVP  V+SL A P+ S          L W KP Q NG L  Y+++Y    
Sbjct: 980  SDTIDFQTDEGVPSPVRSLRAYPMNSKVGGEKGVVVLVWKKPRQTNGKLARYEVEYCK-- 1037

Query: 546  GTKVGPLLER-LPYIS-DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             T+ G L+E+  P    D  +   ++ GLE  T YR  L  +T AG+G
Sbjct: 1038 -TQNGKLVEKSCPRKQIDADSKEIRITGLENETPYRFILRAHTSAGEG 1084



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 24/134 (17%)

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGA------ESKYLFYVPFKNPDNVEGRGSTPNN 617
           TT      L+P  KY   +      GD A      + +     P KNPD V  +G++P N
Sbjct: 709 TTGDATVSLQPFGKYVFRVIARNSVGDSAARLAKDQCETPAKQPDKNPDEVAAKGTSPEN 768

Query: 618 LVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ--SELVLANQPT----- 670
           +++ W  M   E N   F Y + +R  +  +      V DW++   E   A++ T     
Sbjct: 769 IIVQWKPMSREEWNGADFHYVVKYRPKDEDQR-----VGDWKEVAVEDPFADRVTVNLDD 823

Query: 671 ------FQPYEIKV 678
                 FQPYE++V
Sbjct: 824 EKDVKPFQPYEVQV 837



 Score = 47.4 bits (111), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 91/263 (34%), Gaps = 29/263 (11%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPS---DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           + C   G P P   W KDG    PS   +++ Q     SL+   ++ SD G Y CE  N 
Sbjct: 65  IHCYANGNPRPSYRWKKDGKTFLPSMFPEKVVQKPGEGSLVFSRLDESDAGLYQCEAENS 124

Query: 110 VGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECK-ASGLPEPEIHWVHNGKPIS 167
            G A    + +      +F T EPE +     +     C   +  P   ++W+  GK   
Sbjct: 125 NGTAVDRPVRVQETWIRHFKTAEPEVVVVEVGDPYQRNCSPPASNPYARVYWILMGKEPG 184

Query: 168 QAPPNPRRKVGPN-------RITIENLRKSDTGNYGCNATNSLGYVYK-----DVYVNVL 215
                    +  N           E   KSD   Y C A N     YK      + +   
Sbjct: 185 HFETISSSHISSNEQGTLFFHYVNETDFKSDR-YYTCTAENIELKDYKFGNQFSLQITNN 243

Query: 216 AHAPEITEAPKDEY-------TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT----GGRY 264
                    P ++Y        + G    L C   G P P+  W HN +E++       +
Sbjct: 244 KRRSLQQMPPTEQYVNQSSPIALQGNQHKLHCFFSGYPAPKPRWFHNGREISEDSDAAGF 303

Query: 265 TILETGDLKITDVAFADSGEYTC 287
                G   + +V    +G+Y C
Sbjct: 304 RFESYGKTLVFNVTQDKAGKYDC 326



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 122/353 (34%), Gaps = 65/353 (18%)

Query: 111 GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFE------------------------ 146
           G   S SID S +  P     P+F++    +TV F+                        
Sbjct: 12  GHISSGSIDWSAIETP-----PQFVHDKNADTVYFKVEKSGMSDESAKNTPGNLLEQTIH 66

Query: 147 CKASGLPEPEIHWVHNGKPI--SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLG 204
           C A+G P P   W  +GK    S  P    +K G   +    L +SD G Y C A NS G
Sbjct: 67  CYANGNPRPSYRWKKDGKTFLPSMFPEKVVQKPGEGSLVFSRLDESDAGLYQCEAENSNG 126

Query: 205 -YVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA-PKPEVNWIHNQKE---- 258
             V + V V         T  P+      G      C    + P   V WI   KE    
Sbjct: 127 TAVDRPVRVQETWIRHFKTAEPEVVVVEVGDPYQRNCSPPASNPYARVYWILMGKEPGHF 186

Query: 259 --LTGGRYTILETGDL---KITDVAFADSGEYTCFARN------KLGTAQGSGSLTVKEH 307
             ++    +  E G L    + +  F     YTC A N      K G  Q S  +T  + 
Sbjct: 187 ETISSSHISSNEQGTLFFHYVNETDFKSDRYYTCTAENIELKDYKFGN-QFSLQITNNKR 245

Query: 308 THITDQP--EDYEVEA------GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFV 359
             +   P  E Y  ++      G      C     P+ K    W      I  +S+    
Sbjct: 246 RSLQQMPPTEQYVNQSSPIALQGNQHKLHCFFSGYPAPKPR--WFHNGREISEDSDAAGF 303

Query: 360 QSNDYSLTVTKSSELD-SGQYTCRAQTELDFIEAQATLTVQV----PLEAPSN 407
           +   Y  T+  +   D +G+Y CR  T+ D I+    + V+     PL  P N
Sbjct: 304 RFESYGKTLVFNVTQDKAGKYDCRFATQQD-IDRTFNVVVEAAPYWPLGPPPN 355


>gi|404247440|ref|NP_001258190.1| peroxidasin homolog precursor [Rattus norvegicus]
          Length = 1475

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 180/360 (50%), Gaps = 17/360 (4%)

Query: 51  VELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           V   C   G P P+ IW ++   + +    R++  + G +L+I++ + +D+G Y C   N
Sbjct: 260 VYFTCRAEGNPKPEIIWLRNNNELSMKTDSRLNLLDDG-TLMIQNTQEADEGVYQCMAKN 318

Query: 109 GVGEAKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             GEAK++ + L  L   A P F ++P+       E+VT EC A+G P P+I W    + 
Sbjct: 319 VAGEAKTHEVTLRYLGSPARPTFVIQPQNTEVLVGESVTLECSATGHPLPQITWTRGDR- 377

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            +  P +PR  + P+  + I+N+ +SD+G Y C A+NS+  ++   ++ V A  P+ T  
Sbjct: 378 -TPLPIDPRVNITPSGGLYIQNVAQSDSGEYTCFASNSVDSIHATAFIIVQA-LPQFTVT 435

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSG 283
           P+    ++G+TV   C   G P+P + W     +L+   R+ +L +G L+I+ VA  D G
Sbjct: 436 PQSRVVIEGQTVDFQCEAKGYPQPVIAWTKGGSQLSVDRRHLVLSSGTLRISGVALHDQG 495

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +Y C A N +G+ +    LTV+          P D  VE G +    C++  +P  + +I
Sbjct: 496 QYECQAVNIIGSQKVVAHLTVQPRVTPVFASIPSDMTVEVGTNVQLPCSSQGEP--EPAI 553

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            W    + +      +F  S +  LT+      D+G+Y C A+  + +      L+V VP
Sbjct: 554 TW--NKDGVQVTESGKFHISPEGFLTINDVGTADAGRYECVARNTIGYASVSMVLSVNVP 611



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 90/264 (34%), Positives = 122/264 (46%), Gaps = 11/264 (4%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDG---VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           L  + V L C   G PLPQ  W++     +PI+P   I+       L I++V  SD G Y
Sbjct: 351 LVGESVTLECSATGHPLPQITWTRGDRTPLPIDPRVNITPSG---GLYIQNVAQSDSGEY 407

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
           TC  SN V    + +  + V A P FTV P+     E +TV F+C+A G P+P I W   
Sbjct: 408 TCFASNSVDSIHATAF-IIVQALPQFTVTPQSRVVIEGQTVDFQCEAKGYPQPVIAWTKG 466

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA-PEI 221
           G  +S    +     G  RI+   L   D G Y C A N +G      ++ V     P  
Sbjct: 467 GSQLSVDRRHLVLSSGTLRISGVALH--DQGQYECQAVNIIGSQKVVAHLTVQPRVTPVF 524

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
              P D     G  V L C   G P+P + W  +  ++T  G++ I   G L I DV  A
Sbjct: 525 ASIPSDMTVEVGTNVQLPCSSQGEPEPAITWNKDGVQVTESGKFHISPEGFLTINDVGTA 584

Query: 281 DSGEYTCFARNKLGTAQGSGSLTV 304
           D+G Y C ARN +G A  S  L+V
Sbjct: 585 DAGRYECVARNTIGYASVSMVLSV 608



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 136/308 (44%), Gaps = 11/308 (3%)

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAA--PYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           Q + TCE    +      +I    L    P  T EP+  +     TV F C+A G P+PE
Sbjct: 214 QAAATCEYPRRIQGRSVATITPEELNCERPRITSEPQDADVTSGNTVYFTCRAEGNPKPE 273

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV-YKDVYVNVL 215
           I W+ N   +S    +    +    + I+N +++D G Y C A N  G     +V +  L
Sbjct: 274 IIWLRNNNELSMKTDSRLNLLDDGTLMIQNTQEADEGVYQCMAKNVAGEAKTHEVTLRYL 333

Query: 216 AH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGD 271
                P     P++   + G++V L C   G P P++ W    +       R  I  +G 
Sbjct: 334 GSPARPTFVIQPQNTEVLVGESVTLECSATGHPLPQITWTRGDRTPLPIDPRVNITPSGG 393

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
           L I +VA +DSGEYTCFA N + +   +  + V+     T  P+   V  GQ+  F+C A
Sbjct: 394 LYIQNVAQSDSGEYTCFASNSVDSIHATAFIIVQALPQFTVTPQSRVVIEGQTVDFQCEA 453

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
              P  +  I W +G   +  +     + S   +L ++  +  D GQY C+A   +   +
Sbjct: 454 KGYP--QPVIAWTKGGSQLSVDRRHLVLSSG--TLRISGVALHDQGQYECQAVNIIGSQK 509

Query: 392 AQATLTVQ 399
             A LTVQ
Sbjct: 510 VVAHLTVQ 517


>gi|395531178|ref|XP_003767659.1| PREDICTED: LOW QUALITY PROTEIN: contactin-2 [Sarcophilus harrisii]
          Length = 1059

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 167/630 (26%), Positives = 263/630 (41%), Gaps = 58/630 (9%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    + P    ++     +L I  V F D+G+Y C
Sbjct: 269 ALVGQQVTLECFAFGNPVPRIKWRKLDDSLPPQWATAE----PTLQIPSVNFEDEGTYEC 324

Query: 105 EVSNGVGE--AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
           E  N  G   AK   I   V A P +        A     + + C A+G P P I W+ N
Sbjct: 325 EAENTKGRDTAKGRII---VQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTIRWLRN 381

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
           G P+S      R ++    +    L   D+G Y C A N  G +Y    + V A AP+  
Sbjct: 382 GDPLSS---QNRVEISGGDLKFSKLVLEDSGMYQCVAENKHGTIYASAELAVQAFAPDFR 438

Query: 223 EAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
             P         G  V++ C+   APK  V W    + L    R TI   G L + +++ 
Sbjct: 439 LNPVRRLIPAARGGEVIIPCQPRSAPKSIVLWSKGTEILVNSSRVTITPDGTLILRNISR 498

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           +D G+YTCFA N +G A  +G L+V++ T IT  P   ++  G++ T +C+A  DP++ L
Sbjct: 499 SDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGENLTLQCHASHDPTMDL 558

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDY-----SLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +  W     PIDF+      +          LT+  +     G+YTC AQT +D     A
Sbjct: 559 TFTWALDGFPIDFDKSGGHYRRASLKETIGDLTILNAQLRHGGKYTCMAQTVVDSTSETA 618

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GS 451
           TL V+ P   P    +   I      ++W+    +    H     Y +Q  +  DG+   
Sbjct: 619 TLLVRGPPGPPGGVVVRD-ISNTTVQLTWS----RGFDNHSPIAKYTLQARSLPDGKWKQ 673

Query: 452 IRELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGVPGT 506
           +R    N +G + T +V    P      RV+A N    G  +GP S+I    T E  P  
Sbjct: 674 VRTNPANIEGNAETAQVLGLTPWMDYEFRVVASNILGTGEPSGPSSKI---RTKESAPTV 730

Query: 507 VQSLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSV-----KGTKVGPLLERLPY 558
             S  +   G+     + W  +  E  NG   GY + ++       +  KV         
Sbjct: 731 APSGLSGGGGAPGELIINWTPMLREYQNGEGFGYLLSFRRQGSSDWQKAKVSH------- 783

Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGS 613
            +D      +   + P T + + + GY + G+G ES           P   P  V+ +G+
Sbjct: 784 -ADALHFVYRNESVRPYTPFEVKIRGYNRQGEGPESLTTTVYSAEEEPRVAPAKVKAKGT 842

Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRI-FWR 642
             + + + W  + + + N     Y I +W+
Sbjct: 843 LSSEMDVMWEPVHQDDMNGVLLGYEIRYWK 872



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 147/377 (38%), Gaps = 42/377 (11%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPI----NPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           +K+ L C    +P     W  +G  +    +P  ++  GN    +I+   +  D G Y C
Sbjct: 73  EKIALACRARASPPATYRWKMNGTEMKLEQDPHYQLVGGNL---VIMNPTKTRDAGVYQC 129

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIH----- 158
             +N VG   S    L       F    EF     +   T E     LP  P  H     
Sbjct: 130 LATNPVGTVVSREAVLR------FGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLS 183

Query: 159 --WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVY--- 211
             W+ N  P +  P + R  V      + I     SD  NY C AT+ + ++ K V+   
Sbjct: 184 YRWLLNEFP-NFIPTDGRHFVSQTTGNLYIARTNASDXANYSCLATSHMDFITKSVFSKF 242

Query: 212 --VNVLAH-----APEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGR 263
             +N+ A      +P I    P + Y + G+ V L C  FG P P + W      L    
Sbjct: 243 AQLNLAAEDSRPSSPSIKARFPLETYALVGQQVTLECFAFGNPVPRIKWRKLDDSLPPQW 302

Query: 264 YTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQ 323
            T   T  L+I  V F D G Y C A N  G     G + V+          D E + G 
Sbjct: 303 ATAEPT--LQIPSVNFEDEGTYECEAENTKGRDTAKGRIIVQAQPEWLKVISDTEADIGS 360

Query: 324 SATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +  + C A   P  + +I WLR  +P+  ++    V+ +   L  +K    DSG Y C A
Sbjct: 361 NLRWGCAAAGKP--RPTIRWLRNGDPLSSQNR---VEISGGDLKFSKLVLEDSGMYQCVA 415

Query: 384 QTELDFIEAQATLTVQV 400
           + +   I A A L VQ 
Sbjct: 416 ENKHGTIYASAELAVQA 432



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 111/297 (37%), Gaps = 30/297 (10%)

Query: 126 PYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
           P F  +P    F   + EE +   C+A   P     W  NG  +        + VG N +
Sbjct: 55  PIFEDQPVSSLFPEESSEEKIALACRARASPPATYRWKMNGTEMKLEQDPHYQLVGGNLV 114

Query: 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTCR 241
            +   +  D G Y C ATN +G V     V       E ++  +D   T +G  V+L C 
Sbjct: 115 IMNPTKTRDAGVYQCLATNPVGTVVSREAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCN 174

Query: 242 VFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGTA 296
                P     W+ N+      T GR+ + + TG+L I     +D   Y+C A + +   
Sbjct: 175 PPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDXANYSCLATSHMDFI 234

Query: 297 QGS-----GSLTVKEHTHITDQP--------EDYEVEAGQSATFRCNAVSDPSLKLSIVW 343
             S       L +         P        E Y +  GQ  T  C A  +P  +  I W
Sbjct: 235 TKSVFSKFAQLNLAAEDSRPSSPSIKARFPLETYAL-VGQQVTLECFAFGNPVPR--IKW 291

Query: 344 LRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
            +    +D    P++  + + +L +   +  D G Y C A+       A+  + VQ 
Sbjct: 292 RK----LDDSLPPQWATA-EPTLQIPSVNFEDEGTYECEAENTKGRDTAKGRIIVQA 343



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 11/129 (8%)

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           V W PV    + G   GY+++ W + D E +  + +   G  T+  V    P +K    V
Sbjct: 849 VMWEPVHQDDMNGVLLGYEIRYWKDGDKEAAA-DRVRTAGLDTSARVTGLQPNTKYHVTV 907

Query: 481 LAFNGAYNGPPSEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVL 534
            A+N A  GP S   +  T    P   PG +    +  L SS+  +KW  V P++    +
Sbjct: 908 RAYNRAGTGPASPSTNATTMKPPPRRPPGNI----SWTLSSSSLNIKWDPVIPQRNESAV 963

Query: 535 MGYKIKYQS 543
            GYK+ Y++
Sbjct: 964 TGYKMLYRN 972



 Score = 43.5 bits (101), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 14/148 (9%)

Query: 479 RVLAFNGAYNGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLM 535
           ++  +N    GP S   +  + E  P    + ++A    SS   + W  V  +  NGVL+
Sbjct: 805 KIRGYNRQGEGPESLTTTVYSAEEEPRVAPAKVKAKGTLSSEMDVMWEPVHQDDMNGVLL 864

Query: 536 GYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK 595
           GY+I+Y      +      R   +     TSA++ GL+P+TKY + +  Y +AG G  S 
Sbjct: 865 GYEIRYWKDGDKEAAADRVRTAGLD----TSARVTGLQPNTKYHVTVRAYNRAGTGPASP 920

Query: 596 YLFYVPFKNPDNVEGRGSTPNNLVISWT 623
                  K P         P N  ISWT
Sbjct: 921 STNATTMKPPPR-----RPPGN--ISWT 941


>gi|395841521|ref|XP_003793583.1| PREDICTED: contactin-1 isoform 1 [Otolemur garnettii]
          Length = 1018

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 181/732 (24%), Positives = 298/732 (40%), Gaps = 98/732 (13%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K    L  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 241 PADIVVQFKDIYTLMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 298

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ + +   + V A P +    E IN  E +    + + C A
Sbjct: 299 NIQLEDEGLYECEAENIRGKDR-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 354

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +             + + ++     G Y C A N+ G +Y +
Sbjct: 355 TGKPIPTIRWLKNGYSYHKG-----------ELRLYDVTFDHAGMYQCIAENTHGAIYAN 403

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 404 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 463

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I+++   D+G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 464 WEDGSLEISNITRNDAGIYTCFAENNRGKANNTGTLVITDPTRIILAPINADITVGENAT 523

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ VW      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 524 MQCAASFDPALDLTFVWSFNGYVIDFTRENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 583

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGH 434
            AQT +D   A A L V+ P   P     I  I A    ++W       +P+S  +++  
Sbjct: 584 TAQTIVDNSSASADLVVRGPPGPPGGLR-IDDIRATSVGLTWSRGSDNHSPISKYTIQA- 641

Query: 435 FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
                 +T    D +    +  + +G          +P  +   RV+A N    G PS  
Sbjct: 642 ------KTILSDDWKDVKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSVP 695

Query: 495 ISFVTPEGVPGTVQSLEAIPLGSS--AFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVG 550
            + +  +G    V   +    G S     + W  +  E   G   GY + ++   G +  
Sbjct: 696 SNKIRTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWK 755

Query: 551 PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEG 610
            +    P   D      K   + PST +++ +  +   GDG         P+        
Sbjct: 756 KVTVTNP---DTGRYVHKDETMSPSTAFQVKVKAFNNKGDG---------PY-------- 795

Query: 611 RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT 670
                     S TA+     +AP              EA  +  +     SE+ +  +  
Sbjct: 796 ----------SLTAVINSAQDAP-------------SEAPTEVGLKVLSSSEISVYWKHV 832

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTE----VDKFVPASKNFARVLAFNGAY 726
            +    KVV+T+  +   G  RE   ++ + ++ E    ++  +P ++ F  V A N A 
Sbjct: 833 LE----KVVETYQIRYWAGHDREEAAHRIQVSSQEYSARLENLLPDTQYFVEVGACNSAG 888

Query: 727 NGPPSEIISFVT 738
            GPPS++I   T
Sbjct: 889 CGPPSDVIETFT 900



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 140/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   ++  SDR S    G +L+I + +   D G Y C  S
Sbjct: 60  KVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 117

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 118 NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 171

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 172 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVESSDKGNYSCFVSSP--SITKSVFSKFIP 228

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD YT+ G+ V L C   G P P++ W    + +      
Sbjct: 229 LIPIPERTTKPYPADIVVQFKDIYTLMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 288

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 289 STSGAVLKIFNIQLEDEGLYECEAENIRGKDRHQARIYVQAFPEWVEHINDTEVDIGSDL 348

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+       + E R      Y +T        +G Y C A+ 
Sbjct: 349 YWPCVATGKPI--PTIRWLKNGYSY-HKGELRL-----YDVTFDH-----AGMYQCIAEN 395

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 396 THGAIYANAELKI 408



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 109/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   +     +    VG N +   
Sbjct: 47  PINTIYPE---ESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTS-DRYSMVGGNLVINN 102

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   +
Sbjct: 103 PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 162

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 163 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVESSDKGNYSCFVSSPSITKSV 222

Query: 299 SGSLT----VKEHT------HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                    + E T       I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 223 FSKFIPLIPIPERTTKPYPADIVVQFKDIYTLMGQNVTLECFALGNPV--PDIRWRKVLE 280

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+        QA + VQ
Sbjct: 281 PMPSTAE---ISTSGAVLKIFNIQLEDEGLYECEAENIRGKDRHQARIYVQ 328



 Score = 43.1 bits (100), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+   L +V+ + +  V W  V    L      Y+++ W   D E +   + V+  
Sbjct: 808 PSEAPTEVGL-KVLSSSEISVYWKHV----LEKVVETYQIRYWAGHDREEAAHRIQVSSQ 862

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GPPS++I   T +  P     + +     S +
Sbjct: 863 E-YSARLENLLPDTQYFVEVGACNSAGCGPPSDVIETFTKKAPPSKPPRIISSIRSGSRY 921

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYK+ Y+
Sbjct: 922 IITWDHVVALSNESTVTGYKVLYR 945


>gi|86565334|ref|NP_001033395.1| Protein SAX-7, isoform b [Caenorhabditis elegans]
 gi|351050585|emb|CCD65185.1| Protein SAX-7, isoform b [Caenorhabditis elegans]
          Length = 1328

 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 207/430 (48%), Gaps = 33/430 (7%)

Query: 8   EYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIW 67
           +YK GN+  L  I      S  +  P +QYV +   +AL+  + +L C F G P P+  W
Sbjct: 229 DYKFGNQFSLQ-ITNNKRRSLQQMPPTEQYVNQSSPIALQGNQHKLHCFFSGYPAPKPRW 287

Query: 68  SKDGVPINPSDRISQG----NYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVL 123
             +G  I+  D  + G    +YGK+L+  +V     G Y C  +      +++++   V 
Sbjct: 288 FHNGREIS-EDSDAAGFRFESYGKTLVF-NVTQDKAGKYDCRFATQQDIDRTFNV--VVE 343

Query: 124 AAPYFTV-EPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
           AAPY+ +  P   N +E E V F+C   G P P++ +  NG  I ++  + R  +   R+
Sbjct: 344 AAPYWPLGPPPNTNTSEGEKVIFDCTTYGKPTPKVTFYKNGVEI-ESQKDDRYLIEGTRL 402

Query: 183 TIENLR-----KSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE--YTVDGKT 235
           TI +++     K D   Y C + N  G+++ + Y+N+LA  P++   P  E    V GK 
Sbjct: 403 TIFDVKKGTYGKGDNAVYQCKSENKHGWLWTNFYLNLLAFKPQLLIDPGKEEVEAVAGKK 462

Query: 236 VVLTCRVFGAPKPEVNW----IHNQK--ELTGGRYTILETGDLKITDVAFADSGEYTCFA 289
           V L C+ F +P   V W    I   K  ++    Y +   G L  ++V  A+ GEY C  
Sbjct: 463 VTLECKFFASPNAAVKWEAPMISGSKGNQIPADAYGV---GKLVFSEVTAAEEGEYECIG 519

Query: 290 RNKLGTAQGSGSLTVKEHTHITDQPEDYEVE-AGQSATFRCNAVSDPSLKLSIVWLRG-- 346
            NK G A G  +L V++ T +   P   EV  AG+     C+A +D  L++   WL    
Sbjct: 520 TNKYGQATGLITLKVRKPTIVQPFPRVEEVRMAGEEMRLACDATADNQLEVKYEWLVDGK 579

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-VPLEAP 405
           S P D  S   +   +D+SL ++  ++ D+ +Y C   T+LD +E +  +  + VP+   
Sbjct: 580 SLPEDRISSGHYKIDDDHSLVISNPTQDDTAKYKCVVSTKLDQVEKEIKIQFKDVPVAVH 639

Query: 406 SNFTLIQVID 415
           S +  +Q  D
Sbjct: 640 SAW--VQTCD 647



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 100/228 (43%), Gaps = 40/228 (17%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG----------- 448
            VP   PS   +++        ++WN V PQ+  G+F GYK+  W ++             
Sbjct: 861  VPSSIPSGLRVLEK-SGTTVTLAWNGVDPQTANGNFTGYKITYWVDEADQDSDDSSEDDE 919

Query: 449  -----------------EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                             +  IR+ +V    +T   +    PA+ N A +   NGA+ G  
Sbjct: 920  DDEKRKFRWKRSIRVKRQSGIRKTVVFGPSATQGTLTDLKPATLNHAYIQVTNGAHEGSA 979

Query: 492  SEIISFVTPEGVPGTVQSLEAIPLGSS------AFYLKWVKPEQPNGVLMGYKIKYQSVK 545
            S+ I F T EGVP  V+SL A P+ S          L W KP Q NG L  Y+++Y    
Sbjct: 980  SDTIDFQTDEGVPSPVRSLRAYPMNSKVGGEKGVVVLVWKKPRQTNGKLARYEVEYCK-- 1037

Query: 546  GTKVGPLLER-LPYIS-DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
             T+ G L+E+  P    D  +   ++ GLE  T YR  L  +T AG+G
Sbjct: 1038 -TQNGKLVEKSCPRKQIDADSKEIRITGLENETPYRFILRAHTSAGEG 1084



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 24/134 (17%)

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGA------ESKYLFYVPFKNPDNVEGRGSTPNN 617
           TT      L+P  KY   +      GD A      + +     P KNPD V  +G++P N
Sbjct: 709 TTGDATVSLQPFGKYVFRVIARNSVGDSAARLAKDQCETPAKQPDKNPDEVAAKGTSPEN 768

Query: 618 LVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ--SELVLANQPT----- 670
           +++ W  M   E N   F Y + +R  +  +      V DW++   E   A++ T     
Sbjct: 769 IIVQWKPMSREEWNGADFHYVVKYRPKDEDQR-----VGDWKEVAVEDPFADRVTVNLDD 823

Query: 671 ------FQPYEIKV 678
                 FQPYE++V
Sbjct: 824 EKDVKPFQPYEVQV 837



 Score = 47.4 bits (111), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 91/263 (34%), Gaps = 29/263 (11%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPS---DRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
           + C   G P P   W KDG    PS   +++ Q     SL+   ++ SD G Y CE  N 
Sbjct: 65  IHCYANGNPRPSYRWKKDGKTFLPSMFPEKVVQKPGEGSLVFSRLDESDAGLYQCEAENS 124

Query: 110 VGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECK-ASGLPEPEIHWVHNGKPIS 167
            G A    + +      +F T EPE +     +     C   +  P   ++W+  GK   
Sbjct: 125 NGTAVDRPVRVQETWIRHFKTAEPEVVVVEVGDPYQRNCSPPASNPYARVYWILMGKEPG 184

Query: 168 QAPPNPRRKVGPN-------RITIENLRKSDTGNYGCNATNSLGYVYK-----DVYVNVL 215
                    +  N           E   KSD   Y C A N     YK      + +   
Sbjct: 185 HFETISSSHISSNEQGTLFFHYVNETDFKSDR-YYTCTAENIELKDYKFGNQFSLQITNN 243

Query: 216 AHAPEITEAPKDEY-------TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT----GGRY 264
                    P ++Y        + G    L C   G P P+  W HN +E++       +
Sbjct: 244 KRRSLQQMPPTEQYVNQSSPIALQGNQHKLHCFFSGYPAPKPRWFHNGREISEDSDAAGF 303

Query: 265 TILETGDLKITDVAFADSGEYTC 287
                G   + +V    +G+Y C
Sbjct: 304 RFESYGKTLVFNVTQDKAGKYDC 326



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 122/353 (34%), Gaps = 65/353 (18%)

Query: 111 GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFE------------------------ 146
           G   S SID S +  P     P+F++    +TV F+                        
Sbjct: 12  GHISSGSIDWSAIETP-----PQFVHDKNADTVYFKVEKSGMSDESAKNTPGNLLEQTIH 66

Query: 147 CKASGLPEPEIHWVHNGKPI--SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLG 204
           C A+G P P   W  +GK    S  P    +K G   +    L +SD G Y C A NS G
Sbjct: 67  CYANGNPRPSYRWKKDGKTFLPSMFPEKVVQKPGEGSLVFSRLDESDAGLYQCEAENSNG 126

Query: 205 -YVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA-PKPEVNWIHNQKE---- 258
             V + V V         T  P+      G      C    + P   V WI   KE    
Sbjct: 127 TAVDRPVRVQETWIRHFKTAEPEVVVVEVGDPYQRNCSPPASNPYARVYWILMGKEPGHF 186

Query: 259 --LTGGRYTILETGDL---KITDVAFADSGEYTCFARN------KLGTAQGSGSLTVKEH 307
             ++    +  E G L    + +  F     YTC A N      K G  Q S  +T  + 
Sbjct: 187 ETISSSHISSNEQGTLFFHYVNETDFKSDRYYTCTAENIELKDYKFGN-QFSLQITNNKR 245

Query: 308 THITDQP--EDYEVEA------GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFV 359
             +   P  E Y  ++      G      C     P+ K    W      I  +S+    
Sbjct: 246 RSLQQMPPTEQYVNQSSPIALQGNQHKLHCFFSGYPAPKPR--WFHNGREISEDSDAAGF 303

Query: 360 QSNDYSLTVTKSSELD-SGQYTCRAQTELDFIEAQATLTVQV----PLEAPSN 407
           +   Y  T+  +   D +G+Y CR  T+ D I+    + V+     PL  P N
Sbjct: 304 RFESYGKTLVFNVTQDKAGKYDCRFATQQD-IDRTFNVVVEAAPYWPLGPPPN 355


>gi|332259536|ref|XP_003278844.1| PREDICTED: peroxidasin homolog [Nomascus leucogenys]
          Length = 1747

 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 176/360 (48%), Gaps = 17/360 (4%)

Query: 51  VELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           V   C   G P P+ IW ++   + +    R++  + G +L+I++ + +DQG Y C   N
Sbjct: 531 VYFTCRAEGNPKPEIIWLRNNNELSMKTDSRLNLLDDG-TLMIQNTQETDQGIYQCMAKN 589

Query: 109 GVGEAKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             GE K++ + L      A P F ++P+       E+VT EC A+G P P I W    + 
Sbjct: 590 VAGEVKTHEVTLRYFGSPARPTFVIQPQNTEVLVGESVTLECSATGHPPPRISWTRGDR- 648

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            +  P +PR  + P+  + I+N+ + D+G Y C+ATN+L  V+   ++ V A  P+ T  
Sbjct: 649 -TPLPVDPRVNITPSGGLYIQNVVQEDSGEYACSATNNLDSVHATAFIIVQA-LPQFTVT 706

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSG 283
           P+D   ++G+TV   C   G P P + W     +L+   R+ +L +G L+I+ VA  D G
Sbjct: 707 PQDRVVIEGQTVDFQCEAKGNPPPVIAWTKGGSQLSVDRRHLVLSSGTLRISGVALHDQG 766

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +Y C A N +G+ +    LTV+          P D  VE G +    C++  +P  + +I
Sbjct: 767 QYECQAVNIIGSQKVVAHLTVQPRVTPVFASIPSDTTVEVGANVQLPCSSQGEP--EPAI 824

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            W    + +      +F  S +  LT+      D+G+Y C A+  +        L+V VP
Sbjct: 825 TW--NKDGVQVTESGKFHISPEGFLTINDVGPADAGRYECVARNTIGSASVSMVLSVNVP 882



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 126/284 (44%), Gaps = 9/284 (3%)

Query: 121 SVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN 180
           +V   P  T EP+  +     TV F C+A G P+PEI W+ N   +S    +    +   
Sbjct: 509 AVWKRPRITSEPQDADVTSGNTVYFTCRAEGNPKPEIIWLRNNNELSMKTDSRLNLLDDG 568

Query: 181 RITIENLRKSDTGNYGCNATNSLGYV-YKDVYVNVLAHA--PEITEAPKDEYTVDGKTVV 237
            + I+N +++D G Y C A N  G V   +V +        P     P++   + G++V 
Sbjct: 569 TLMIQNTQETDQGIYQCMAKNVAGEVKTHEVTLRYFGSPARPTFVIQPQNTEVLVGESVT 628

Query: 238 LTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGT 295
           L C   G P P ++W    +       R  I  +G L I +V   DSGEY C A N L +
Sbjct: 629 LECSATGHPPPRISWTRGDRTPLPVDPRVNITPSGGLYIQNVVQEDSGEYACSATNNLDS 688

Query: 296 AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE 355
              +  + V+     T  P+D  V  GQ+  F+C A  +P     I W +G   +  +  
Sbjct: 689 VHATAFIIVQALPQFTVTPQDRVVIEGQTVDFQCEAKGNP--PPVIAWTKGGSQLSVDRR 746

Query: 356 PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
              + S   +L ++  +  D GQY C+A   +   +  A LTVQ
Sbjct: 747 HLVLSSG--TLRISGVALHDQGQYECQAVNIIGSQKVVAHLTVQ 788



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 12/185 (6%)

Query: 35  QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR---ISQGNYGKSLII 91
           Q  VT +  V +  + V+  C   G P P   W+K G  ++   R   +S G    +L I
Sbjct: 702 QFTVTPQDRVVIEGQTVDFQCEAKGNPPPVIAWTKGGSQLSVDRRHLVLSSG----TLRI 757

Query: 92  KHVEFSDQGSYTCEVSNGVGEAKSYS-IDLSVLAAPYFTVEPEFINAAEEETVTFECKAS 150
             V   DQG Y C+  N +G  K  + + +     P F   P          V   C + 
Sbjct: 758 SGVALHDQGQYECQAVNIIGSQKVVAHLTVQPRVTPVFASIPSDTTVEVGANVQLPCSSQ 817

Query: 151 GLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKD 209
           G PEP I W  +G  ++++    +  + P   +TI ++  +D G Y C A N++G     
Sbjct: 818 GEPEPAITWNKDGVQVTES---GKFHISPEGFLTINDVGPADAGRYECVARNTIGSASVS 874

Query: 210 VYVNV 214
           + ++V
Sbjct: 875 MVLSV 879


>gi|395841523|ref|XP_003793584.1| PREDICTED: contactin-1 isoform 2 [Otolemur garnettii]
          Length = 1007

 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 182/732 (24%), Positives = 297/732 (40%), Gaps = 98/732 (13%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K    L  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 230 PADIVVQFKDIYTLMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 287

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ + +   + V A P +    E IN  E +    + + C A
Sbjct: 288 NIQLEDEGLYECEAENIRGKDR-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 343

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +             + + ++     G Y C A N+ G +Y +
Sbjct: 344 TGKPIPTIRWLKNGYSYHKG-----------ELRLYDVTFDHAGMYQCIAENTHGAIYAN 392

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 393 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 452

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I+++   D+G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 453 WEDGSLEISNITRNDAGIYTCFAENNRGKANNTGTLVITDPTRIILAPINADITVGENAT 512

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ VW      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 513 MQCAASFDPALDLTFVWSFNGYVIDFTRENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 572

Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGH 434
            AQT +D   A A L V+ P   P     I  I A    ++W       +P+S  +++  
Sbjct: 573 TAQTIVDNSSASADLVVRGPPGPPGGLR-IDDIRATSVGLTWSRGSDNHSPISKYTIQA- 630

Query: 435 FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
            +      W +   +  I E     G          +P  +   RV+A N    G PS  
Sbjct: 631 -KTILSDDWKDVKTDPPIIE-----GNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSVP 684

Query: 495 ISFVTPEGVPGTVQSLEAIPLGSS--AFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVG 550
            + +  +G    V   +    G S     + W  +  E   G   GY + ++   G +  
Sbjct: 685 SNKIRTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWK 744

Query: 551 PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEG 610
            +    P   D      K   + PST +++ +  +   GDG         P+        
Sbjct: 745 KVTVTNP---DTGRYVHKDETMSPSTAFQVKVKAFNNKGDG---------PY-------- 784

Query: 611 RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT 670
                     S TA+     +AP              EA  +  +     SE+ +  +  
Sbjct: 785 ----------SLTAVINSAQDAP-------------SEAPTEVGLKVLSSSEISVYWKHV 821

Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTE----VDKFVPASKNFARVLAFNGAY 726
            +    KVV+T+  +   G  RE   ++ + ++ E    ++  +P ++ F  V A N A 
Sbjct: 822 LE----KVVETYQIRYWAGHDREEAAHRIQVSSQEYSARLENLLPDTQYFVEVGACNSAG 877

Query: 727 NGPPSEIISFVT 738
            GPPS++I   T
Sbjct: 878 CGPPSDVIETFT 889



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 140/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   ++  SDR S    G +L+I + +   D G Y C  S
Sbjct: 49  KVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 106

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 107 NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 160

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 161 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVESSDKGNYSCFVSSP--SITKSVFSKFIP 217

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD YT+ G+ V L C   G P P++ W    + +      
Sbjct: 218 LIPIPERTTKPYPADIVVQFKDIYTLMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 277

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 278 STSGAVLKIFNIQLEDEGLYECEAENIRGKDRHQARIYVQAFPEWVEHINDTEVDIGSDL 337

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+       + E R      Y +T        +G Y C A+ 
Sbjct: 338 YWPCVATGKPI--PTIRWLKNGYSY-HKGELRL-----YDVTFDH-----AGMYQCIAEN 384

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 385 THGAIYANAELKI 397



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 109/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   +     +    VG N +   
Sbjct: 36  PINTIYPE---ESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTS-DRYSMVGGNLVINN 91

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   +
Sbjct: 92  PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 151

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 152 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVESSDKGNYSCFVSSPSITKSV 211

Query: 299 SGSLT----VKEHT------HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                    + E T       I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 212 FSKFIPLIPIPERTTKPYPADIVVQFKDIYTLMGQNVTLECFALGNPV--PDIRWRKVLE 269

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+        QA + VQ
Sbjct: 270 PMPSTAE---ISTSGAVLKIFNIQLEDEGLYECEAENIRGKDRHQARIYVQ 317



 Score = 43.1 bits (100), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 8/144 (5%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P EAP+   L +V+ + +  V W  V    L      Y+++ W   D E +   + V+  
Sbjct: 797 PSEAPTEVGL-KVLSSSEISVYWKHV----LEKVVETYQIRYWAGHDREEAAHRIQVSSQ 851

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
           E  +  ++  +P ++ F  V A N A  GPPS++I   T +  P     + +     S +
Sbjct: 852 E-YSARLENLLPDTQYFVEVGACNSAGCGPPSDVIETFTKKAPPSKPPRIISSIRSGSRY 910

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
            + W  V        + GYK+ Y+
Sbjct: 911 IITWDHVVALSNESTVTGYKVLYR 934


>gi|45645161|gb|AAS73243.1| neuronal cell adhesion molecule [Bos taurus]
          Length = 501

 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 100/272 (36%), Positives = 143/272 (52%), Gaps = 11/272 (4%)

Query: 39  TRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEF 96
           +RK+E  LR   + L CI  G P P   W K DG +PIN   R    N+ K+L I  V  
Sbjct: 236 SRKEE--LRGNVLSLECIAEGLPTPIIYWIKEDGTLPIN---RTFYRNFKKTLQIVQVTE 290

Query: 97  SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           +D G+Y C   N +G A  ++I ++V AAP + + P+ +  + EE  T  C+A+G P+P 
Sbjct: 291 ADSGNYQCIAKNALG-AIHHTISVTVKAAPXWIIAPQNLVLSPEEDGTLICRANGNPKPR 349

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           I W+ NG PI  AP +P RK+  + I    +++  +  Y CNA+N  GY+  + +VNVLA
Sbjct: 350 ISWLSNGVPIEIAPDDPSRKIDGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLA 409

Query: 217 HAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLK 273
             P I  +    Y V   +  +L C  FG+P P + W    K   L    Y + E G L+
Sbjct: 410 EPPRILTSANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALREDIYVLHENGTLE 469

Query: 274 ITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           I       +G YTC ARNKLG A+    L +K
Sbjct: 470 IPVAQKDSTGTYTCVARNKLGMAKNDVHLEIK 501



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 82/192 (42%), Gaps = 5/192 (2%)

Query: 233 GKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE-TGDLKITDVAFADSGEYTCFARN 291
           G  + L C   G P P + WI     L   R         L+I  V  ADSG Y C A+N
Sbjct: 243 GNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKKTLQIVQVTEADSGNYQCIAKN 302

Query: 292 KLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID 351
            LG    + S+TVK        P++  +   +  T  C A  +P  ++S  WL    PI+
Sbjct: 303 ALGAIHHTISVTVKAAPXWIIAPQNLVLSPEEDGTLICRANGNPKPRIS--WLSNGVPIE 360

Query: 352 FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV--QVPLEAPSNFT 409
              +    + +  ++  +K  E  S  Y C A  E  ++ A A + V  + P    S  T
Sbjct: 361 IAPDDPSRKIDGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTSANT 420

Query: 410 LIQVIDAKKAVV 421
           L QVI  + A++
Sbjct: 421 LYQVIANRPALL 432


>gi|281346449|gb|EFB22033.1| hypothetical protein PANDA_004018 [Ailuropoda melanoleuca]
          Length = 979

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 180/715 (25%), Positives = 299/715 (41%), Gaps = 76/715 (10%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  ++L C   G P+P   W + DG P+    + S+      L I + +  D+G Y 
Sbjct: 222 AAKDSSIKLECFALGNPVPDISWRRLDGNPLPGKVKYSKSQ--AILEIPNFQQEDEGFYE 279

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G   +    L   A P +  + +    +  + + +ECKASG P P   W+ NG
Sbjct: 280 CIAGNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDNLFWECKASGKPNPLYTWLKNG 338

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++   P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 339 ERLN---PEERIQIENGTLVITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSK 395

Query: 224 AP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL-ETGDLKITDVAFA 280
            P  K+     G  + + C+    P+  ++W    + L   +   L E G LKI +V  +
Sbjct: 396 NPIKKNSVVQVGGDITIECKPNAFPRATISWKRGMESLRQSKRVFLSEDGSLKIYNVTRS 455

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A+ +GSL VKE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 456 DAGSYTCIATNQFGVAKNTGSLVVKERTVITIPPSKMDVTVGESIVLPCQVSHDPSIEVV 515

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            +W    + ID +       R    +   L +       SG+Y C  +T L+ + A A +
Sbjct: 516 FIWSFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAVADI 575

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW P S  +     + + +Q  T          ++
Sbjct: 576 IVRGPPGPPEDVR-VEHISSTTSQLSWRPGSDNN--SPIQIFTIQARTPFSVGWQAVSTV 632

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLE 511
            E++   G++    V    P  +   RV+A N    G PS+    + T   VP    +  
Sbjct: 633 PEIL--SGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTNI 690

Query: 512 AIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
               GS S   + W  +  E  NG   GY I  + V  T      ER+P + + +    +
Sbjct: 691 NGGGGSRSELVITWESIPEELQNGEEFGYIIMLRPVGSTAWTK--ERVPSV-ESSRFVYR 747

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESKY-LFYV----PFKNPDNVEGRGSTPNNLVISWT 623
              + P + + + +  Y   G+G+ S   + Y     P + P     +  + + + +SW 
Sbjct: 748 NESITPLSPFEVKVGVYNNEGEGSLSTVSIVYSGEDEPQQAPRGTSVQSFSASEMEVSWK 807

Query: 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWT 683
           A+                       AWN       R +  VL        YE   V  WT
Sbjct: 808 AI-----------------------AWN-------RNTGRVLG-------YE---VLYWT 827

Query: 684 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           +   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S  ++  T
Sbjct: 828 DDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGAGPSSPPVNVTT 881



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 165/660 (25%), Positives = 254/660 (38%), Gaps = 87/660 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC ++N   EA+      SV   P   V+                
Sbjct: 163 NLYIAKVEPSDVGNYTCFITN--KEAQR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 215

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ ++  EC A G P P+I W   +G P+   P   +       + I N ++
Sbjct: 216 FPETIQAAKDSSIKLECFALGNPVPDISWRRLDGNPL---PGKVKYSKSQAILEIPNFQQ 272

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A N  G       + +    PE  +  ++ Y      +   C+  G P P 
Sbjct: 273 EDEGFYECIAGNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDNLFWECKASGKPNPL 331

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L       +E G L IT +  +DSG Y C A NK      +  L V     
Sbjct: 332 YTWLKNGERLNPEERIQIENGTLVITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAP 391

Query: 309 HITDQP--EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P  ++  V+ G   T  C   + P  + +I W RG E        R   S D SL
Sbjct: 392 DFSKNPIKKNSVVQVGGDITIECKPNAFP--RATISWKRGME--SLRQSKRVFLSEDGSL 447

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV------ 420
            +   +  D+G YTC A  +    +   +L V+         T+I +  +K  V      
Sbjct: 448 KIYNVTRSDAGSYTCIATNQFGVAKNTGSLVVK-------ERTVITIPPSKMDVTVGESI 500

Query: 421 -----VSWNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKF 470
                VS +P         F G  +         E+ G  S+ +L++   +       K+
Sbjct: 501 VLPCQVSHDPSIEVVFIWSFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQ--LNHSGKY 558

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
           +   K     L+            ++ +   G PG  + +    + S+   L W      
Sbjct: 559 LCTVKTTLESLS-----------AVADIIVRGPPGPPEDVRVEHISSTTSQLSWRPGSDN 607

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           N  +  + I  Q+     VG   +  +P I    T +A + GL P  +Y   +      G
Sbjct: 608 NSPIQIFTI--QARTPFSVGWQAVSTVPEILSGKTYNATVVGLSPWVEYEFRVVAGNSIG 665

Query: 590 DGAESKY------LFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  SK          VP   P N+ G G + + LVI+W ++PE   N   F Y I  R 
Sbjct: 666 IGEPSKASELLRTKASVPVVAPTNINGGGGSRSELVITWESIPEELQNGEEFGYIIMLRP 725

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
             +  AW ++ V     S  V  N+      P+E+KV       +GEGS+  + IV  GE
Sbjct: 726 VGS-TAWTKERVPSVESSRFVYRNESITPLSPFEVKV--GVYNNEGEGSLSTVSIVYSGE 782



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 157/638 (24%), Positives = 252/638 (39%), Gaps = 79/638 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +NP +RI   N   +L+I  +  SD G Y C   N   +  
Sbjct: 322 CKASGKPNPLYTWLKNGERLNPEERIQIEN--GTLVITMLNVSDSGVYQCAAENKY-QII 378

Query: 115 SYSIDLSVLA-APYFTVEPEFINAAEE--ETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
             + +L VLA AP F+  P   N+  +    +T ECK +  P   I W    + + Q+  
Sbjct: 379 YANAELRVLASAPDFSKNPIKKNSVVQVGGDITIECKPNAFPRATISWKRGMESLRQSKR 438

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
               + G   + I N+ +SD G+Y C ATN  G V K+    V+     IT  P      
Sbjct: 439 VFLSEDG--SLKIYNVTRSDAGSYTCIATNQFG-VAKNTGSLVVKERTVITIPPSKMDVT 495

Query: 232 DGKTVVLTCRVFGAPKPEVNWIHN-------------QKELTGGRYTILETGDLKITDVA 278
            G+++VL C+V   P  EV +I +               E  GG       GDL I ++ 
Sbjct: 496 VGESIVLPCQVSHDPSIEVVFIWSFNGDVIDLKKGVAHFERIGGE----SVGDLMIRNIQ 551

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSDPS 336
              SG+Y C  +  L +      + V+        PED  VE   S T + +    SD +
Sbjct: 552 LNHSGKYLCTVKTTLESLSAVADIIVRGPP---GPPEDVRVEHISSTTSQLSWRPGSDNN 608

Query: 337 LKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
             + I  ++   P         + P  +    Y+ TV   S     ++   A   +   E
Sbjct: 609 SPIQIFTIQARTPFSVGWQAVSTVPEILSGKTYNATVVGLSPWVEYEFRVVAGNSIGIGE 668

Query: 392 ---AQATLTVQ--VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ----- 441
              A   L  +  VP+ AP+N          + V++W  +  +   G   GY +      
Sbjct: 669 PSKASELLRTKASVPVVAPTNINGGGG-SRSELVITWESIPEELQNGEEFGYIIMLRPVG 727

Query: 442 --TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
              WT++          V + ES T       P S    +V  +N    G  S +    +
Sbjct: 728 STAWTKERVPSVESSRFVYRNESIT-------PLSPFEVKVGVYNNEGEGSLSTVSIVYS 780

Query: 500 PEGVP-----GT-VQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKVGP 551
            E  P     GT VQS  A  +  S   + W    +  G ++GY++ Y     K + +G 
Sbjct: 781 GEDEPQQAPRGTSVQSFSASEMEVSWKAIAW---NRNTGRVLGYEVLYWTDDSKESMIGK 837

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPD 606
           +      +S   TT   + GL+ +T Y   +  Y  AG G  S  +        P + P 
Sbjct: 838 I-----RVSGNVTTK-NITGLKANTIYFASVRAYNTAGAGPSSPPVNVTTKKSPPSQPPA 891

Query: 607 NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           N+  +  T + L ++W  +  +E+ +    Y+I +R++
Sbjct: 892 NIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQN 928



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 107/288 (37%), Gaps = 36/288 (12%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L+ P FT EP+   F     E  +   C ASG P P   W  NG  I        R  G
Sbjct: 5   LLSRPIFTQEPQDVIFPLDLSESEIILNCAASGYPSPHYRWKQNGTDIDFTMSYHYRLDG 64

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N          D G Y C ATN+LG +         A+  +     +   +V +G+ VV
Sbjct: 65  GNLAISSPHTDQDIGMYQCLATNTLGTILSRKAKLQFAYIEDFETKTRSAVSVREGQGVV 124

Query: 238 LTCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        W  N   L       R+   ETG+L I  V  +D G YTCF
Sbjct: 125 LLC----GPPPHFGDLFYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCF 180

Query: 289 ARNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSL 337
             NK    + QG  +  V+    +  +         PE  +     S    C A+ +P  
Sbjct: 181 ITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSIKLECFALGNPVP 240

Query: 338 KLSIVWLRGSEPIDFESEPRFVQ--SNDYSLTVTKSSELDSGQYTCRA 383
            +S  W R    +D    P  V+   +   L +    + D G Y C A
Sbjct: 241 DIS--WRR----LDGNPLPGKVKYSKSQAILEIPNFQQEDEGFYECIA 282



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 91/382 (23%), Positives = 136/382 (35%), Gaps = 48/382 (12%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSD----RISQGNYGKSLIIKHVEFSDQGS 101
           L   ++ L C   G P P   W ++G  I+ +     R+  GN   S    H +  D G 
Sbjct: 24  LSESEIILNCAASGYPSPHYRWKQNGTDIDFTMSYHYRLDGGNLAISS--PHTD-QDIGM 80

Query: 102 YTCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPEI--- 157
           Y C  +N +G   S    L       F T     ++  E + V   C     P P     
Sbjct: 81  YQCLATNTLGTILSRKAKLQFAYIEDFETKTRSAVSVREGQGVVLLCG----PPPHFGDL 136

Query: 158 --HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY-------- 205
              W  N  P+     N RR V      + I  +  SD GNY C  TN            
Sbjct: 137 FYAWTFNDNPLYVQEDN-RRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPPT 195

Query: 206 --------VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQ 256
                   V  +    +    PE  +A KD       ++ L C   G P P+++W   + 
Sbjct: 196 PLVQRTDGVMGEYEPKIEVRFPETIQAAKD------SSIKLECFALGNPVPDISWRRLDG 249

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
             L G          L+I +    D G Y C A N  G     G L          + ++
Sbjct: 250 NPLPGKVKYSKSQAILEIPNFQQEDEGFYECIAGNLRGRNLAKGQLIFYAPPEWEQKIQN 309

Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
             +    +  + C A   P+   +  WL+  E ++ E     +Q  + +L +T  +  DS
Sbjct: 310 TYLSIYDNLFWECKASGKPNPLYT--WLKNGERLNPEER---IQIENGTLVITMLNVSDS 364

Query: 377 GQYTCRAQTELDFIEAQATLTV 398
           G Y C A+ +   I A A L V
Sbjct: 365 GVYQCAAENKYQIIYANAELRV 386



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 106/242 (43%), Gaps = 17/242 (7%)

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDA 416
           RFV  N+ S+T     E+  G Y    +  L  +    +   + P +AP   T +Q   A
Sbjct: 743 RFVYRNE-SITPLSPFEVKVGVYNNEGEGSLSTVSIVYSGEDE-PQQAPRG-TSVQSFSA 799

Query: 417 KKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
            +  VSW  ++     G   GY+V  WT+   E  I ++ V+ G  TT  +      +  
Sbjct: 800 SEMEVSWKAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVS-GNVTTKNITGLKANTIY 858

Query: 477 FARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVL 534
           FA V A+N A  GP S  ++  T +  P    +  A  L +S   L W  VK  +    +
Sbjct: 859 FASVRAYNTAGAGPSSPPVNVTTKKSPPSQPPANIAWKLTNSKLCLNWEHVKTMENESEV 918

Query: 535 MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGYTKAGDGAE 593
           +GYKI Y+  + +K         +I +   TSA+L  L P    Y I +   +  GDG+ 
Sbjct: 919 LGYKILYRQNRQSKT--------HILETNNTSAEL--LVPFEEDYLIEIRTVSDGGDGSS 968

Query: 594 SK 595
           S+
Sbjct: 969 SE 970


>gi|62413634|ref|NP_001014814.1| contactin-1 precursor [Danio rerio]
 gi|34419873|gb|AAQ67360.1| recognition molecule F3-b [Danio rerio]
          Length = 1031

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 185/744 (24%), Positives = 290/744 (38%), Gaps = 110/744 (14%)

Query: 30  RHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSL 89
           +  P    V   K  AL ++ + L C   G PLP   W K    + P+  +S    G  L
Sbjct: 242 KRYPADIRVKFPKTYALVHQNITLECFALGNPLPHIRWRKLDADLPPNYEVSMN--GALL 299

Query: 90  IIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFE 146
            + +V++ D+GSY CE  N  G    Y   L V   P +    E IN  E++    +T  
Sbjct: 300 HLINVQYEDEGSYECETLNVKG-MDWYRQWLYVEGPPEWA---EHINDTEKDVGSELTLR 355

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV 206
           C A G P P I W+ +G              G   +   +L   D+G Y C A N  G +
Sbjct: 356 CVAVGKPIPWIRWLKDG-----------YSYGKGELKFSSLTFEDSGMYQCIAENEWGTI 404

Query: 207 YKDVYVNVLAHAPEITEAPKDEYTVDGKT--VVLTCRVFGAPKPEVNWIHNQKELT-GGR 263
           Y +  + V++ AP     P  +  +  +   VV+ C    APKP   W    + L+   R
Sbjct: 405 YANAELRVVSCAPTFIYNPVKKILLGAENGRVVIECNPRAAPKPRFIWKRGSELLSNSSR 464

Query: 264 YTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQ 323
             I + G L+I +   +D G YTC+A N  G +  +G+LT+ E T IT  P + E   G 
Sbjct: 465 IFIWDDGSLEILNATKSDEGSYTCYAENDRGKSNSTGTLTITEATKITVGPSNSEAAVGD 524

Query: 324 SATFRCNAVSDPSLKLSIVWLRGSEPIDFES-----EPRFVQSNDYSLTVTKSSELDSGQ 378
           +   +C+A  DPSL ++ +W   S  I+F +     E      N   L +       +G 
Sbjct: 525 TIVLQCSASYDPSLDVTFIWTVDSYSINFYTDFEHYELDMDHENSGDLLIKNIQIRHAGH 584

Query: 379 YTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSL 431
           Y C AQT +D   A+A + V+  L  P     ++ I      + W       +P+    +
Sbjct: 585 YICTAQTIVDNATAEADVFVR-GLPGPPGGVRVEEIGDTSVKIRWCLGSDHGSPLIQHIV 643

Query: 432 RGH-FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLA---FNGAY 487
           +   F     + W       +     +N    + T VD + P  +   RV A   F    
Sbjct: 644 QTRDFYALDPEDWK----TATTTPAFLNGSTESATVVDLY-PWMQYEFRVHAINEFGAGE 698

Query: 488 NGPPSEIISFVTPEGVPGTVQSLEAIPLG-SSAFYLKW--VKPEQPNGVLMGYKIKYQSV 544
           N  PS  I   T +  P    S     +G S    + W  VKP+   G   GY + ++  
Sbjct: 699 NSRPS--IKIKTWDARPTVAPSDVIGQVGISGELIVTWNPVKPQFFFGKKFGYVVAFKQH 756

Query: 545 KGTKVGPLLERLPYISDPTTTS-AKLAGLEPSTKYRIHLAGYTKAGDGAESKY-LFY--- 599
           +  +      +   + DP T        + P T+ +I ++ +   G+G  S   + Y   
Sbjct: 757 EDYEW-----KWSTVEDPETRRYVYKESMTPDTEIQIKVSTFNNKGEGPASLISVVYSPR 811

Query: 600 -VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHF---KYRI-FWRRHNTGEAWNQDD 654
             P + P +V  R  T    ++ W  +    + AP      Y+I +WR+++         
Sbjct: 812 IAPTEAPLDVYARQVTSTEALVWWLPV----YQAPPMWVDGYQIRYWRKYD--------- 858

Query: 655 VLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 714
                                          D E +   +IV++     T ++   P S 
Sbjct: 859 -------------------------------DNEAAASRVIVHR-TVNQTRLENMRPDSH 886

Query: 715 NFARVLAFNGAYNGPPSEIISFVT 738
               V AFNGA  GPPSE     T
Sbjct: 887 YLIEVRAFNGAGLGPPSEHCEMFT 910



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 144/599 (24%), Positives = 229/599 (38%), Gaps = 64/599 (10%)

Query: 39   TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
             +K  +   N +V + C     P P+ IW +    ++ S RI   + G SL I +   SD
Sbjct: 424  VKKILLGAENGRVVIECNPRAAPKPRFIWKRGSELLSNSSRIFIWDDG-SLEILNATKSD 482

Query: 99   QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            +GSYTC   N  G++ S    L++  A   TV P    AA  +T+  +C AS  P  ++ 
Sbjct: 483  EGSYTCYAENDRGKSNSTGT-LTITEATKITVGPSNSEAAVGDTIVLQCSASYDPSLDVT 541

Query: 159  --WVHNGKPISQAPPNPRRKVGPNR-----ITIENLRKSDTGNYGCNATNSL--GYVYKD 209
              W  +   I+        ++  +      + I+N++    G+Y C A   +       D
Sbjct: 542  FIWTVDSYSINFYTDFEHYELDMDHENSGDLLIKNIQIRHAGHYICTAQTIVDNATAEAD 601

Query: 210  VYVNVLAHAP-------------EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
            V+V  L   P             +I      ++       ++  R F A  PE +W   +
Sbjct: 602  VFVRGLPGPPGGVRVEEIGDTSVKIRWCLGSDHGSPLIQHIVQTRDFYALDPE-DW---K 657

Query: 257  KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSG-SLTVKE-HTHITDQP 314
               T   +    T    + D+      E+   A N+ G  + S  S+ +K      T  P
Sbjct: 658  TATTTPAFLNGSTESATVVDLYPWMQYEFRVHAINEFGAGENSRPSIKIKTWDARPTVAP 717

Query: 315  EDYEVEAGQSATF--RCNAVSDPSLKLS-----IVWLRGSEPIDFESEPRFVQSNDYSLT 367
             D   + G S       N V  P          +V  +  E  D+E +   V+  +    
Sbjct: 718  SDVIGQVGISGELIVTWNPVK-PQFFFGKKFGYVVAFKQHE--DYEWKWSTVEDPETRRY 774

Query: 368  VTKSSELDSGQYTCRAQTELDFIEAQATLTVQV------PLEAPSNFTLIQVIDAKKAVV 421
            V K S     +   +  T  +  E  A+L   V      P EAP +    QV  + +A+V
Sbjct: 775  VYKESMTPDTEIQIKVSTFNNKGEGPASLISVVYSPRIAPTEAPLDVYARQVT-STEALV 833

Query: 422  SWNPVSPQSLRGHFRGYKVQTWTE-KDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
             W PV  Q+      GY+++ W +  D E +   +IV++     T ++   P S     V
Sbjct: 834  WWLPVY-QAPPMWVDGYQIRYWRKYDDNEAAASRVIVHR-TVNQTRLENMRPDSHYLIEV 891

Query: 481  LAFNGAYNGPPSEIISFVTPEGVPGTVQSL-EAIPLGSSAFYLKW--VKPEQPNGVLMGY 537
             AFNGA  GPPSE     T    P     + + +       YL W  +        + GY
Sbjct: 892  RAFNGAGLGPPSEHCEMFTRRPPPSRRLRVYKYVSFTRKWLYLYWDHIYNYWNESYVEGY 951

Query: 538  KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPST-KYRIHLAGYTKAGDGAESK 595
            KI ++  +G + G L          TT    +    P T  Y I L    + GDG  S+
Sbjct: 952  KILFRK-EGERYGKLY---------TTGRHYIDFPMPETGDYVIELRARCEGGDGPISQ 1000



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 98/281 (34%), Gaps = 31/281 (11%)

Query: 125 APYFTVEPEFINAAE---EETVTFECKASGLPEPEIHWVHNGKPIS--QAPPNPRRKVGP 179
            P F  EP     AE   E  ++  C+    P   I W  N   I   + P      VG 
Sbjct: 41  GPIFEEEPLDTVYAEDSPENKISMNCRVRANPPAIIKWWLNNWQIKLMEQPDEHFSLVGG 100

Query: 180 NRITIENLRKSDTGNYGCNATNSLGYVYK---DVYVNVLAHAPEITEAPKDEYTVDGKTV 236
           N +     +    G Y C A N  G V     +V    L   P     P +    +G+  
Sbjct: 101 NLVITNPEKNKHAGKYVCVAKNVYGTVMSKEANVKFGYLNQFPTDEREPVN--VKEGQGA 158

Query: 237 VLTCRVFGAPKPEV--NWIHNQKE----LTGGRYTILETGDLKITDVAFADSGEYTCFAR 290
           VL C        EV   WI+N           R+    TG+L I  V  +D G Y+CF  
Sbjct: 159 VLLCTPPSRYPDEVMFRWIYNDFPNFIIPDQRRFVSQSTGNLYIAKVEPSDVGNYSCFVS 218

Query: 291 N-KLGTAQGSG--SLTVKEHTHITDQPEDYEVE-------AGQSATFRCNAVSDPSLKLS 340
           +  +G +  S   +L  +    +   P D  V+         Q+ T  C A+ +P   + 
Sbjct: 219 SPTIGKSVFSMPIALIPQIEKEVKRYPADIRVKFPKTYALVHQNITLECFALGNPLPHIR 278

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTC 381
              L    P ++E     V  N   L +      D G Y C
Sbjct: 279 WRKLDADLPPNYE-----VSMNGALLHLINVQYEDEGSYEC 314


>gi|62024162|gb|AAH66363.1| SDK2 protein, partial [Homo sapiens]
          Length = 1805

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 195/453 (43%), Gaps = 23/453 (5%)

Query: 187 LRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAP 246
           L   DTG + C A N+ G V    Y+ V + AP IT  P D   +DG +VVL C   GAP
Sbjct: 3   LVPDDTGMFQCFARNAAGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLACETSGAP 62

Query: 247 KPEVNWIHNQKELTGG-----RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGS 301
           +P + W   ++ L  G     R+T LE+G L I+    +D+G YTC A N  G  + S  
Sbjct: 63  RPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASAD 122

Query: 302 LTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS 361
           L V   T IT  P+D  V  G  A+  C    DP + +  +W +    +  ES PR    
Sbjct: 123 LVVWARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTIRYIWEKDGATLGTESHPRIRLD 182

Query: 362 NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSN-FTLIQVIDAKKAV 420
            + SL ++++   D G YTCR  +        A L V+    AP +    +  ++ +   
Sbjct: 183 RNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAIN 242

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
           ++W    P         Y ++  +E +   ++    V+  ++T+  V   VPA     R+
Sbjct: 243 LTWT--KPFDGNSPLIRYILEM-SENNAPWTVLLASVDP-KATSVTVKGLVPARSYQFRL 298

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSS--AFYLKWVKPEQP--NGVLMG 536
            A N    G  S+    V+    P T      I  G +  +  ++W  P +   NG+L G
Sbjct: 299 CAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKG 358

Query: 537 YKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK- 595
           Y I+Y  + G  VG    +   I+D    +  L  L   T Y I +A Y  AG G  S  
Sbjct: 359 YIIRY-CLAGLPVG---YQFKNITDADVNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSK 414

Query: 596 ----YLFYVPFKNPDNVEGRGSTPNNLVISWTA 624
                L  VP   P NV    +    +  +W A
Sbjct: 415 VTEWTLQGVPTVPPGNVHAEATNSTTIRFTWNA 447



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 127/582 (21%), Positives = 215/582 (36%), Gaps = 53/582 (9%)

Query: 98  DQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI 157
           D G + C   N  GE ++ +       AP  T  P      +  +V   C+ SG P P I
Sbjct: 7   DTGMFQCFARNAAGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAI 66

Query: 158 HWVHNGKPISQAPPN-PR-RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVL 215
            W    + ++      PR   +    + I     SD G Y C ATNS G       + V 
Sbjct: 67  TWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW 126

Query: 216 AHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETG 270
           A    IT+ P+D+  + G    + C V   P+  + +I  +   T G     R  +   G
Sbjct: 127 ART-RITKPPQDQSVIKGTQASMVCGVTHDPRVTIRYIWEKDGATLGTESHPRIRLDRNG 185

Query: 271 DLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-------EDYEVEAGQ 323
            L I+     D G YTC   +  G    S  L V++  H  + P       E   +    
Sbjct: 186 SLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTW 245

Query: 324 SATFRCNAVSDPSLKLSIVWLRGSEP---IDFESEPR--------FVQSNDYSLTVTKSS 372
           +  F  N+   P ++  +     + P   +    +P+         V +  Y   +   +
Sbjct: 246 TKPFDGNS---PLIRYILEMSENNAPWTVLLASVDPKATSVTVKGLVPARSYQFRLCAVN 302

Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
           ++  GQ++   +        + +L  + P   P N  +      +  ++ W P       
Sbjct: 303 DVGKGQFSKDTE--------RVSLPEEPPTAPPQN-VIASGRTNQSIMIQWQPPPESHQN 353

Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 492
           G  +GY ++        G   + I +  +     ++  +  +     V A+N A  G  S
Sbjct: 354 GILKGYIIRYCLAGLPVGYQFKNITD-ADVNNLLLEDLIIWTNYEIEVAAYNSAGLGVYS 412

Query: 493 EIISFVTPEGV----PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK-IKYQSVKGT 547
             ++  T +GV    PG V + EA    +  F      P+  NG+  GYK I ++  +  
Sbjct: 413 SKVTEWTLQGVPTVPPGNVHA-EATNSTTIRFTWNAPSPQFINGINQGYKLIAWEPEQEE 471

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDN 607
           +V  +  R P   D +     ++GL+  T+Y   +  +T  GDG  S        ++   
Sbjct: 472 EVTMVTAR-PNFQD-SIHVGFVSGLKKFTEYFTSVLCFTTPGDGPRSTPQLVRTHEDVPG 529

Query: 608 VEGRGS----TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
             G  S       +L +SW      E N     YRI W  +N
Sbjct: 530 PVGHLSFSEILDTSLKVSWQE--PGEKNGILTGYRISWEEYN 569



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 106/425 (24%), Positives = 154/425 (36%), Gaps = 58/425 (13%)

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKE-HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           D+G + CFARN  G  Q S  L V     +IT  P D  V  G S    C     P  + 
Sbjct: 7   DTGMFQCFARNAAGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLACETSGAP--RP 64

Query: 340 SIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
           +I W +G   +   S   PRF      SL ++ +   D+G YTC A       EA A L 
Sbjct: 65  AITWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADL- 123

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIV 457
                          V+ A+  +    P   QS+    +   V   T  D   +IR +  
Sbjct: 124 ---------------VVWARTRIT--KPPQDQSVIKGTQASMVCGVTH-DPRVTIRYIWE 165

Query: 458 NKGESTTTEVDKFVPASKN----------------FARVLAFNGAYNGPPSEIISFV--T 499
             G +  TE    +   +N                  RV++  G  +      +  +   
Sbjct: 166 KDGATLGTESHPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHA 225

Query: 500 PEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
           PE    T+ ++E       A  L W KP   N  L+ Y ++  S        LL  +   
Sbjct: 226 PEHPVATLSTVE-----RRAINLTWTKPFDGNSPLIRYILE-MSENNAPWTVLLASV--- 276

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV------PFKNPDNVEGRGS 613
            DP  TS  + GL P+  Y+  L      G G  SK    V      P   P NV   G 
Sbjct: 277 -DPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGR 335

Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
           T  +++I W   PE   N     Y I +        +   ++ D   + L+L +   +  
Sbjct: 336 TNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLIIWTN 395

Query: 674 YEIKV 678
           YEI+V
Sbjct: 396 YEIEV 400



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 11/177 (6%)

Query: 422 SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR-- 479
           +WN  SPQ + G  +GYK+  W E + E  +  +        +  V  FV   K F    
Sbjct: 444 TWNAPSPQFINGINQGYKLIAW-EPEQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYF 501

Query: 480 --VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
             VL F    +GP S      T E VPG V  L    +  ++  + W +P + NG+L GY
Sbjct: 502 TSVLCFTTPGDGPRSTPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGY 561

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           +I ++    T       R+ +     T   ++ GL   T Y I +A  T  G G  S
Sbjct: 562 RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 613



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 2/143 (1%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP  AP N  ++    A +  V+W P    S  G  +GYK+  W  + G  + R   +  
Sbjct: 1255 VPTAAPRNV-VVHGATATQLDVTWEPPPLDSQNGDIQGYKIYFWEAQRGNLTERVKTLFL 1313

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
             E++  ++      +     V AFN A +GP S      T +  P    S++   L +++
Sbjct: 1314 AENSV-KLKNLTGYTAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSAPSSVKFSELTTTS 1372

Query: 520  FYLKWVKPEQPNGVLMGYKIKYQ 542
              + W  P+ PNG+L GY++ Y+
Sbjct: 1373 VNVSWEAPQFPNGILEGYRLVYE 1395



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 105/266 (39%), Gaps = 24/266 (9%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEV 106
           V L C   G P P   W K G  I  S  +    +      SL+I     SD G+YTC  
Sbjct: 52  VVLACETSGAPRPAITWQK-GERILASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLA 110

Query: 107 SN--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--WVHN 162
           +N  GV EA   S DL V A    T  P+  +  +    +  C  +  P   I   W  +
Sbjct: 111 TNSRGVDEA---SADLVVWARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTIRYIWEKD 167

Query: 163 GKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAP 219
           G  +     +PR ++  N  + I      D G Y C   ++ G   +  ++ V  L HAP
Sbjct: 168 GATLGTE-SHPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAP 226

Query: 220 EITEAPKDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVA 278
           E   A     TV+ + + LT  + F    P + +I    E       +L + D K T V 
Sbjct: 227 EHPVATLS--TVERRAINLTWTKPFDGNSPLIRYILEMSENNAPWTVLLASVDPKATSVT 284

Query: 279 F-----ADSGEYTCFARNKLGTAQGS 299
                 A S ++   A N +G  Q S
Sbjct: 285 VKGLVPARSYQFRLCAVNDVGKGQFS 310



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 79/347 (22%), Positives = 136/347 (39%), Gaps = 48/347 (13%)

Query: 379  YTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVID--AKKAVVSWNP----VSPQ 429
            +   AQT   + EA   L V         P +  ++Q  D  A+  ++SW P    +SP 
Sbjct: 1006 FRITAQTRKGWGEAAEALVVTTEKRDRPQPPSRPMVQQEDVRARSVLLSWEPGSDGLSP- 1064

Query: 430  SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
                  R Y +QT     G  ++    V+   S+   VD+  P +    RV A N   + 
Sbjct: 1065 -----VRYYTIQTRELPSGRWALHSASVSHNASSFI-VDRLKPFTSYKFRVKATNDIGDS 1118

Query: 490  PPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQ 542
              SE    +T     P+  P     L   P  +++  ++W  P  ++ NG+L+G++I+Y+
Sbjct: 1119 EFSEESESLTTLQAAPDEAPTI---LSVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYR 1175

Query: 543  SVKGTKVGPLLER-----------------LPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
             +    +   + R                 +  +S P+ T  +L  L    +Y I ++ Y
Sbjct: 1176 ELLYEGLRGFMLRGINNPGATWAELTSMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVY 1235

Query: 586  TKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
               G+G  S  + +F    VP   P NV   G+T   L ++W   P    N     Y+I+
Sbjct: 1236 NAVGEGPSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQNGDIQGYKIY 1295

Query: 641  WRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDG 687
            +     G    +   L   ++ + L N   +  Y + V       DG
Sbjct: 1296 FWEAQRGNLTERVKTLFLAENSVKLKNLTGYTAYMVSVAAFNAAGDG 1342



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 7/199 (3%)

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            VP   P+N + +    +   +V W+ V      G   GYKV  + EKD +   R  +V  
Sbjct: 831  VPSSGPTNVSALATTSSS-MLVRWSEVPEADRNGLVLGYKVM-YKEKDSDTQPRFWLVEG 888

Query: 460  GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
              S + ++           +VLAF    +G PS   I   T + VPG    +    + ++
Sbjct: 889  NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 948

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
            +  L W  P  PNG+++ Y+I ++    T     +E L     P+       GL+P + Y
Sbjct: 949  SVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVL----APSARQYTATGLKPESVY 1004

Query: 579  RIHLAGYTKAGDGAESKYL 597
               +   T+ G G  ++ L
Sbjct: 1005 LFRITAQTRKGWGEAAEAL 1023



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 128/308 (41%), Gaps = 48/308 (15%)

Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           LT   +  ++    T + Q ++    + +T++  VP E P   T + + +          
Sbjct: 591 LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGPPTNLGISN---------- 636

Query: 426 VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
           + P+S+   FR GY  +T    W  +   G + E    L++    N+ ++ + EV    P
Sbjct: 637 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNP 696

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
            +    R+   N     PPS+    +      P+  P  V    A     ++ +L+W+  
Sbjct: 697 FTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTA---SETSLWLRWMPL 753

Query: 527 PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
           PE     N   +GYKIKY    G   G  L  +  + D       +  LE  T+YR+ + 
Sbjct: 754 PEMEYNGNPESVGYKIKYSRSDGH--GKTLSHV--VQDRVERDYTIEDLEEWTEYRVQVQ 809

Query: 584 GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
            +   G G  S+ +       VP   P NV    +T +++++ W+ +PE + N     Y+
Sbjct: 810 AFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYK 869

Query: 639 IFWRRHNT 646
           + ++  ++
Sbjct: 870 VMYKEKDS 877


>gi|324499554|gb|ADY39812.1| Hemicentin-2 [Ascaris suum]
          Length = 3385

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 165/359 (45%), Gaps = 21/359 (5%)

Query: 48   NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            N  + L C   G P PQ +W +DGVP+       +   G  L+I     +D G +TCE  
Sbjct: 1191 NTTLTLECQATGNPAPQIVWKRDGVPV-------ESAQGPRLVINSPMGTDAGRFTCEAR 1243

Query: 108  NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPIS 167
            N  G+A S   ++ V   P F      I   + E    ECK  G P P I W+  G+PI 
Sbjct: 1244 NEAGKA-SADFEVDVFIKPRFRDLKSDIRVRDGERTRLECKVDGHPAPTITWLRGGRPIE 1302

Query: 168  QAPP---NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
                   +PR +     + I   +++D G+Y C A N  G       V VL   P I E 
Sbjct: 1303 DMKNLILSPRGET----LMILKAKRADAGSYSCVAKNFAGESEASFTVTVLTK-PHIDEQ 1357

Query: 225  -PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSG 283
              ++   V    ++L C   G PKP V W+ N + + G RY+++  GDLKI+     D+G
Sbjct: 1358 IDQNPRVVQNNDILLHCPARGNPKPTVFWLLNGEYVQGDRYSVVGDGDLKISSAQEIDAG 1417

Query: 284  EYTCFARNKLGTAQGSGSLTVKEHTHITDQPED-YEVEAGQSATFRCNAVSDPSLKLSIV 342
             YTC A+N+ G+      L V        +    YEV+  +S T  C   ++P  +  I+
Sbjct: 1418 RYTCLAQNEAGSLGTDYELEVIGPPRFHREGNTVYEVKVDESITMDCAVDAEP--RPEII 1475

Query: 343  WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            W RG  P+ + ++   +  +   +T+  +   D G+YTCRA+ E    +   TL V VP
Sbjct: 1476 WYRGDSPL-YLTDNIHISPDGQQITLRGAQVTDGGKYTCRAKNEAGSADIDLTLKVLVP 1533



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 152/326 (46%), Gaps = 23/326 (7%)

Query: 67   WSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAP 126
            W K+GVPI  S  +     G++L I   + SD G Y+C  SN  GE  S +ID+ +L  P
Sbjct: 937  WLKNGVPITTSSNLQLSTSGRNLHIMRGQVSDGGRYSCRASNDAGEDTS-NIDIIILVPP 995

Query: 127  YFTVEPEF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN--RI 182
               V P F  I+A   +TV  ECK SG P PEI W  +GK I    P+ + ++  N   +
Sbjct: 996  KI-VGPPFRTIDAILNQTVQMECKTSGTPPPEIIWSFDGKTIF---PSEKTQILKNGTLL 1051

Query: 183  TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR 241
             +  ++ +  G Y C +TN +G    D ++ V A    IT  P DE  V  G+   + C 
Sbjct: 1052 RLLGVQGNQEGRYSCTSTNKVGRAEADTFLQVTAPPHIIT--PSDELKVIAGQGQTIRCE 1109

Query: 242  VFGAPKPEVNWIHNQKELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSG 300
            V G P P+V W+ N K+              + + +    D+G YTC A N+ G  + S 
Sbjct: 1110 VSGTPHPKVEWLKNGKKFDAAMAQASSNLHYIHLREAQVEDAGRYTCIATNRAGEHRMST 1169

Query: 301  SLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQ 360
             L V     I +     +V+   + T  C A  +P+ +  IVW R   P++    PR V 
Sbjct: 1170 ELHVLVPPQILEGERVVQVKENTTLTLECQATGNPAPQ--IVWKRDGVPVESAQGPRLV- 1226

Query: 361  SNDYSLTVTKSSELDSGQYTCRAQTE 386
                   +      D+G++TC A+ E
Sbjct: 1227 -------INSPMGTDAGRFTCEARNE 1245



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 157/354 (44%), Gaps = 12/354 (3%)

Query: 45   ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
            A+ N+ V++ C   GTP P+ IWS DG  I PS++      G  L +  V+ + +G Y+C
Sbjct: 1007 AILNQTVQMECKTSGTPPPEIIWSFDGKTIFPSEKTQILKNGTLLRLLGVQGNQEGRYSC 1066

Query: 105  EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              +N VG A++ +  L V A P+     + +     +  T  C+ SG P P++ W+ NGK
Sbjct: 1067 TSTNKVGRAEADTF-LQVTAPPHIITPSDELKVIAGQGQTIRCEVSGTPHPKVEWLKNGK 1125

Query: 165  PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
                A       +  + I +   +  D G Y C ATN  G       ++VL   P+I E 
Sbjct: 1126 KFDAAMAQASSNL--HYIHLREAQVEDAGRYTCIATNRAGEHRMSTELHVLV-PPQILEG 1182

Query: 225  PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGE 284
             +     +  T+ L C+  G P P++ W  +     G      +   L I      D+G 
Sbjct: 1183 ERVVQVKENTTLTLECQATGNPAPQIVWKRD-----GVPVESAQGPRLVINSPMGTDAGR 1237

Query: 285  YTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWL 344
            +TC ARN+ G A     + V       D   D  V  G+     C     P+   +I WL
Sbjct: 1238 FTCEARNEAGKASADFEVDVFIKPRFRDLKSDIRVRDGERTRLECKVDGHPA--PTITWL 1295

Query: 345  RGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
            RG  PI+ + +   +     +L + K+   D+G Y+C A+      EA  T+TV
Sbjct: 1296 RGGRPIE-DMKNLILSPRGETLMILKAKRADAGSYSCVAKNFAGESEASFTVTV 1348



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 150/350 (42%), Gaps = 9/350 (2%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA- 113
           C     P  + +W  +   + P D I   N  ++L +        G YTC+  N VG A 
Sbjct: 651 CKVDAIPEAEVLWKLNERRVVPDDTIVLLNGNQTLWVNRASDQFGGRYTCDARNKVGHAT 710

Query: 114 KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA-SGLPEPEIHWVHNGKPISQAPPN 172
           + + + L+  A P      + ++    + +   CK  SG     + W+ +GKP+   P +
Sbjct: 711 RDFLVKLT--APPVLDRGSQELDVVVGDYIVLTCKVMSGTGTLSVKWLVDGKPVHNGPIS 768

Query: 173 PRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD 232
           P   V   RI I N R SD+GNY C   N  G   K   + VL     +         + 
Sbjct: 769 PTVSVNDRRIEIRNARLSDSGNYVCIVENEAGQARKKFDLAVLERPRFLDMTNLSPSIIV 828

Query: 233 GKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARN 291
           G+ +VL C V G PKP V W+ N K +      +L +   L I      D+G Y+C A N
Sbjct: 829 GRPLVLDCSVTGTPKPTVMWLKNGKPINDSNVLLLNDHQQLHIESATEGDAGRYSCVAEN 888

Query: 292 KLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID 351
           K G  +    + V +   +TD    +EV    + T  C  +SDPS  + I WL+   PI 
Sbjct: 889 KPGRVEKDLIVAVLKPPKMTDHHRAFEVPENDTHTLVC-PISDPS--VGIQWLKNGVPIT 945

Query: 352 FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
             S  +   S   +L + +    D G+Y+CRA  +     +   + + VP
Sbjct: 946 TSSNLQLSTSG-RNLHIMRGQVSDGGRYSCRASNDAGEDTSNIDIIILVP 994



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 157/378 (41%), Gaps = 23/378 (6%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSD---RISQGNY-GKSLIIKHVEF 96
           K   A+ N  V L C   G P P   W KDG  + P +   RI  G   G  L I  ++ 
Sbjct: 255 KNRTAIENSTVLLSCPATGKPEPTIEWYKDGELLKPENITRRIRSGRLEGNDLRIVRIQV 314

Query: 97  SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE--PEFINAAEEETVTFECKASGLPE 154
            D G YTCE  N  G A+   + + V+  P    E  P  I      TVT  C A G P 
Sbjct: 315 GDTGRYTCEAKNKAGMAEQ-DVLIYVMTPPRIEREGVPSEIGGKSRSTVTISCPAYGRPP 373

Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
           P + W+  G+P+  +P       G  ++   +L+K     Y C A N  G   +D  + +
Sbjct: 374 PAVTWLKAGRPLEYSPEVYLSANG-MKLHFIDLKKEHADRYTCIARNLAGEDKRDFSLKM 432

Query: 215 LAHAPEITEAPKDEYTVD---GKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETG- 270
           L  AP I E P     V    G+T V+ C V G+P+P + W+ N + L      +L  G 
Sbjct: 433 L-EAPTI-EGPNILRKVQVNAGRTSVINCPVMGSPEPSIAWLKNGQPLAADEKHMLLNGG 490

Query: 271 -DLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT-DQPEDYEVEAGQSATFR 328
             L+I+D    D   YTC A N +G A     L V     I  D+ E  EV   +     
Sbjct: 491 RQLQISDTTLQDDARYTCIATNNIGLADLETYLQVIGGPVIAGDKLETVEVLVNEPHDLE 550

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           C      +  + I W RG + IDF      S    V +    L +  +   D+G++TC +
Sbjct: 551 CEVSG--TEPMDIEWQRGGQTIDFGGIRGGSSYMQVSARGRRLHILSAQVADTGRFTCVS 608

Query: 384 QTELDFIEAQATLTVQVP 401
           +           L V VP
Sbjct: 609 RNSAGEARKSYDLKVLVP 626



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 157/350 (44%), Gaps = 23/350 (6%)

Query: 64  QTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSV 122
           +  W KD  PI+  S + +  + G+ L + H E  D+GSY+C V N  GE++     L V
Sbjct: 184 EITWLKDFEPIDVHSHKYALSHAGRKLHLLHSELRDEGSYSCRVKNDAGESR-VDYKLLV 242

Query: 123 LAAPYFTVEPEFIN--AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN 180
           L  P   +  +  N  A E  TV   C A+G PEP I W  +G+ +   P N  R++   
Sbjct: 243 LVPPEIIMLDKDKNRTAIENSTVLLSCPATGKPEPTIEWYKDGELLK--PENITRRIRSG 300

Query: 181 RITIENLR-----KSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK- 234
           R+   +LR       DTG Y C A N  G   +DV + V+   P   E       + GK 
Sbjct: 301 RLEGNDLRIVRIQVGDTGRYTCEAKNKAGMAEQDVLIYVMT--PPRIEREGVPSEIGGKS 358

Query: 235 --TVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKI--TDVAFADSGEYTCFAR 290
             TV ++C  +G P P V W+   + L       L    +K+   D+    +  YTC AR
Sbjct: 359 RSTVTISCPAYGRPPPAVTWLKAGRPLEYSPEVYLSANGMKLHFIDLKKEHADRYTCIAR 418

Query: 291 NKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
           N  G  +   SL + E   I   +     +V AG+++   C  +  P  + SI WL+  +
Sbjct: 419 NLAGEDKRDFSLKMLEAPTIEGPNILRKVQVNAGRTSVINCPVMGSP--EPSIAWLKNGQ 476

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
           P+  + E   + +    L ++ ++  D  +YTC A   +   + +  L V
Sbjct: 477 PLAAD-EKHMLLNGGRQLQISDTTLQDDARYTCIATNNIGLADLETYLQV 525



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 176/412 (42%), Gaps = 54/412 (13%)

Query: 49   KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY---------GKSLIIKHVEFSDQ 99
            + + ++C   G P P   W KDG       +I  GN          G++L I        
Sbjct: 1743 RPITIWCTVSGHPFPTVRWLKDG-------KIETGNTDNDIRILENGQALEIIDARPEHS 1795

Query: 100  GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHW 159
            G +TCE  N  G+A+    ++ +   P  T++ +    A +  +T  C A G P+P + W
Sbjct: 1796 GIWTCEAENDAGKAE-LEFNVDIWTPPTVTIDADETIKAIDSPITLHCHALGNPQPSLSW 1854

Query: 160  VHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
               G+P+  +    R  +   R+ I  L++S  G Y C+A N  G     V+V+VL   P
Sbjct: 1855 SMGGQPLISSAEGARISLKGTRLDIPRLQQSHVGEYTCSARNEAGSAEASVHVDVL--VP 1912

Query: 220  EITEAPKDEYT---VDGKTVVLTCRVFGAPKPEVNWIHNQKELT----------GGRYTI 266
             +      E +     G+T+ L C   G P P++ W  N   +T          GGRY  
Sbjct: 1913 PVISRDNIEMSPRLPTGQTLTLLCDASGKPFPKLAWYINSTLVTQSSGSLILGEGGRY-- 1970

Query: 267  LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
                 ++I +++  D G Y C A N  G  +   ++ + +   I +      +E G+ A 
Sbjct: 1971 -----IQINNISLMDRGTYRCIASNVAGRDELLYTVAIVQAPTIANGGTQQVIE-GEVAK 2024

Query: 327  FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
              CNA  +P+    + W R    +  E+  R++ + D  LTV ++   DSG Y C A  E
Sbjct: 2025 INCNAYGEPT--PVVTWQRNG--VRVETGVRYI-AEDTILTVIETRSSDSGIYVCVATNE 2079

Query: 387  LDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGY 438
                +   TL V V   AP     I      ++VV  N  +P SL+   RGY
Sbjct: 2080 AGTTQQAFTLEVLV---APR----IVATSPNESVVPVN--NPFSLKCGVRGY 2122



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 163/366 (44%), Gaps = 16/366 (4%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
            L C   GTP P  +W K+G PIN S+ +   ++ + L I+     D G Y+C   N  G 
Sbjct: 834  LDCSVTGTPKPTVMWLKNGKPINDSNVLLLNDH-QQLHIESATEGDAGRYSCVAENKPGR 892

Query: 113  AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPN 172
             +   I ++VL  P  T         E +T T  C  S  P   I W+ NG PI+ +  N
Sbjct: 893  VEKDLI-VAVLKPPKMTDHHRAFEVPENDTHTLVCPISD-PSVGIQWLKNGVPITTS-SN 949

Query: 173  PRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD 232
             +       + I   + SD G Y C A+N  G    ++ + +L   P+I   P    T+D
Sbjct: 950  LQLSTSGRNLHIMRGQVSDGGRYSCRASNDAGEDTSNIDIIILV-PPKIVGPPF--RTID 1006

Query: 233  G---KTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT-ILETGD-LKITDVAFADSGEYTC 287
                +TV + C+  G P PE+ W  + K +     T IL+ G  L++  V     G Y+C
Sbjct: 1007 AILNQTVQMECKTSGTPPPEIIWSFDGKTIFPSEKTQILKNGTLLRLLGVQGNQEGRYSC 1066

Query: 288  FARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS 347
             + NK+G A+    L V    HI    ++ +V AGQ  T RC     P  K+   WL+  
Sbjct: 1067 TSTNKVGRAEADTFLQVTAPPHIITPSDELKVIAGQGQTIRCEVSGTPHPKVE--WLKNG 1124

Query: 348  EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSN 407
            +   F++      SN + + + ++   D+G+YTC A            L V VP +    
Sbjct: 1125 K--KFDAAMAQASSNLHYIHLREAQVEDAGRYTCIATNRAGEHRMSTELHVLVPPQILEG 1182

Query: 408  FTLIQV 413
              ++QV
Sbjct: 1183 ERVVQV 1188



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 163/371 (43%), Gaps = 17/371 (4%)

Query: 44   VALRNKKVELFCIFGGTPLPQTIWSKDGVPINP-SDRISQGNYGKSLIIKHVEFSDQGSY 102
            +A+  + + L C   G P P   W K+G  I+   DRI      ++  I +V+ +DQG Y
Sbjct: 1546 LAIVGRSIYLECPVTGIPQPTVTWYKEGNLIDAGDDRIILDQNNQTFGILYVQIADQGRY 1605

Query: 103  TCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEP----EI 157
             C   N  G+A+    +L VL  P   T E +     E++++T  C      +     EI
Sbjct: 1606 FCVAENKGGKAEQ-EFNLEVLVPPQMETTELQKFTRREDDSLTLWCPVKQSTDSTTITEI 1664

Query: 158  HWVHNGKPI-SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
             W  +G+PI S +  N R      R+ +      D GNY C A N  G    D  V +L+
Sbjct: 1665 FWYKDGRPIDSSSAHNLRVTSDGRRLQVMRTTLGDAGNYTCIALNRAGESSLDFDVEILS 1724

Query: 217  HAPEITEAPKD--EYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG---GRYTILETGD 271
             AP+I  +  D   +   G+ + + C V G P P V W+ + K  TG       ILE G 
Sbjct: 1725 -APKIDGSRNDVHPHVTVGRPITIWCTVSGHPFPTVRWLKDGKIETGNTDNDIRILENGQ 1783

Query: 272  -LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN 330
             L+I D     SG +TC A N  G A+   ++ +     +T   ++         T  C+
Sbjct: 1784 ALEIIDARPEHSGIWTCEAENDAGKAELEFNVDIWTPPTVTIDADETIKAIDSPITLHCH 1843

Query: 331  AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
            A+ +P   LS  W  G +P+   +E   +      L + +  +   G+YTC A+ E    
Sbjct: 1844 ALGNPQPSLS--WSMGGQPLISSAEGARISLKGTRLDIPRLQQSHVGEYTCSARNEAGSA 1901

Query: 391  EAQATLTVQVP 401
            EA   + V VP
Sbjct: 1902 EASVHVDVLVP 1912



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 148/361 (40%), Gaps = 24/361 (6%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
            ++N  + L C   G P P   W  +G  +   DR S    G  L I   +  D G YTC 
Sbjct: 1365 VQNNDILLHCPARGNPKPTVFWLLNGEYVQ-GDRYSVVGDG-DLKISSAQEIDAGRYTCL 1422

Query: 106  VSNGVGEAKSYSID--LSVLAAPYFTVEPEFINAAE-EETVTFECKASGLPEPEIHWVHN 162
              N   EA S   D  L V+  P F  E   +   + +E++T +C     P PEI W   
Sbjct: 1423 AQN---EAGSLGTDYELEVIGPPRFHREGNTVYEVKVDESITMDCAVDAEPRPEIIWYRG 1479

Query: 163  GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
              P+     N        +IT+   + +D G Y C A N  G    D+ + VL   P I 
Sbjct: 1480 DSPLYLT-DNIHISPDGQQITLRGAQVTDGGKYTCRAKNEAGSADIDLTLKVLV-PPSID 1537

Query: 223  EAP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL---ETGDLKITDV 277
            ++    +   + G+++ L C V G P+P V W      +  G   I+         I  V
Sbjct: 1538 KSNIIGNPLAIVGRSIYLECPVTGIPQPTVTWYKEGNLIDAGDDRIILDQNNQTFGILYV 1597

Query: 278  AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI-TDQPEDYEVEAGQSATFRC--NAVSD 334
              AD G Y C A NK G A+   +L V     + T + + +      S T  C     +D
Sbjct: 1598 QIADQGRYFCVAENKGGKAEQEFNLEVLVPPQMETTELQKFTRREDDSLTLWCPVKQSTD 1657

Query: 335  PSLKLSIVWLRGSEPIDFESEPRF-VQSNDYSLTVTKSSELDSGQYTCRA-----QTELD 388
             +    I W +   PID  S     V S+   L V +++  D+G YTC A     ++ LD
Sbjct: 1658 STTITEIFWYKDGRPIDSSSAHNLRVTSDGRRLQVMRTTLGDAGNYTCIALNRAGESSLD 1717

Query: 389  F 389
            F
Sbjct: 1718 F 1718



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 96/394 (24%), Positives = 168/394 (42%), Gaps = 25/394 (6%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           + N  + L C   G P+P+  W+KDG P      +   + G+   I       +GSY C 
Sbjct: 73  VENNSLILPCEVEGYPVPRIDWTKDGRPALSLPLVQTLSEGQQFKIISANAQHRGSYMCT 132

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECKASGLP-EPEIHWVHNG 163
             N VG+A+  S D+ V+  P       + +   + E+  F C  +      EI W+ + 
Sbjct: 133 ALNKVGKAE-ISFDVDVITRPTVAQRVKDTVEVIKNESAVFRCPITDKNFVGEITWLKDF 191

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           +PI              ++ + +    D G+Y C   N  G    D  + VL   PEI  
Sbjct: 192 EPIDVHSHKYALSHAGRKLHLLHSELRDEGSYSCRVKNDAGESRVDYKLLVLV-PPEIIM 250

Query: 224 APKDE--YTVDGKTVVLTCRVFGAPKPEVNWIHN---------QKELTGGRYTILETGDL 272
             KD+    ++  TV+L+C   G P+P + W  +          + +  GR   LE  DL
Sbjct: 251 LDKDKNRTAIENSTVLLSCPATGKPEPTIEWYKDGELLKPENITRRIRSGR---LEGNDL 307

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ--PEDYEVEAGQSATFRCN 330
           +I  +   D+G YTC A+NK G A+    + V     I  +  P +   ++  + T  C 
Sbjct: 308 RIVRIQVGDTGRYTCEAKNKAGMAEQDVLIYVMTPPRIEREGVPSEIGGKSRSTVTISCP 367

Query: 331 AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
           A   P    ++ WL+   P+++  E  ++ +N   L      +  + +YTC A+      
Sbjct: 368 AYGRPP--PAVTWLKAGRPLEYSPE-VYLSANGMKLHFIDLKKEHADRYTCIARNLAGED 424

Query: 391 EAQATL-TVQVP-LEAPSNFTLIQVIDAKKAVVS 422
           +   +L  ++ P +E P+    +QV   + +V++
Sbjct: 425 KRDFSLKMLEAPTIEGPNILRKVQVNAGRTSVIN 458



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 132/300 (44%), Gaps = 19/300 (6%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
            L C   G   P+  W KDG PI+ S  +   + G  L I   +  D+G YTC   N  G 
Sbjct: 2208 LVCEIEGHA-PRIYWYKDGAPISSSPNMEISDGGTQLKIHSSKLHDEGLYTCVAMNTAGN 2266

Query: 113  AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPN 172
            A      L V   P  T +P  I     +     C+A G+P+P+I W+ +   + Q   +
Sbjct: 2267 ATQKQ-QLYVGVPPRITEKPRRIIVKSGQPAELWCEAVGIPQPQIRWLKDDVALPQTAVD 2325

Query: 173  PRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD 232
             R +   +     N+  +D G Y C A N  G  YKDV + VL   P I     +     
Sbjct: 2326 DRSETPKSTAIFPNVSSADAGVYTCKADNWAGTSYKDVDLVVLI-PPGIYPEMINLTANL 2384

Query: 233  GKTVVLTCRVFGAPKPEVNWIHNQK-ELTGG--RYTILETGDLKITDVAFADSGEYTCFA 289
             +T++L C   G P+P V+W+     ++ G   +Y IL T  L I ++   D G Y C A
Sbjct: 2385 EETLILPCNASGIPEPVVSWVKMPNIDIIGNEDKYQILGTS-LAIRNIGPEDDGFYHCIA 2443

Query: 290  RNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEP 349
            ++  G A G+  L+V          +DY+V         C+ V +P +K + V  RG  P
Sbjct: 2444 KSNAGQAIGARRLSV------IVPKKDYKV-----IWVECDDVGNP-VKTTYVPARGDMP 2491



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 146/364 (40%), Gaps = 23/364 (6%)

Query: 38  VTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
           + RK +V      V + C   G+P P   W K+G P+   ++    N G+ L I      
Sbjct: 443 ILRKVQVNAGRTSV-INCPVMGSPEPSIAWLKNGQPLAADEKHMLLNGGRQLQISDTTLQ 501

Query: 98  DQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECKASGLPEPE 156
           D   YTC  +N +G A   +  L V+  P    +  E +     E    EC+ SG    +
Sbjct: 502 DDARYTCIATNNIGLADLETY-LQVIGGPVIAGDKLETVEVLVNEPHDLECEVSGTEPMD 560

Query: 157 IHWVHNGKPI---------SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVY 207
           I W   G+ I         S    + R +    R+ I + + +DTG + C + NS G   
Sbjct: 561 IEWQRGGQTIDFGGIRGGSSYMQVSARGR----RLHILSAQVADTGRFTCVSRNSAGEAR 616

Query: 208 KDVYVNVLAHAPEITEAPKD---EYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRY 264
           K   + VL   P I E       +  + G    + C+V   P+ EV W  N++ +     
Sbjct: 617 KSYDLKVLV-PPTINETTSSLPLQTIIPGTAFAVECKVDAIPEAEVLWKLNERRVVPDDT 675

Query: 265 TILETGD--LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAG 322
            +L  G+  L +   +    G YTC ARNK+G A     + +     +    ++ +V  G
Sbjct: 676 IVLLNGNQTLWVNRASDQFGGRYTCDARNKVGHATRDFLVKLTAPPVLDRGSQELDVVVG 735

Query: 323 QSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCR 382
                 C  +S     LS+ WL   +P+        V  ND  + +  +   DSG Y C 
Sbjct: 736 DYIVLTCKVMSGTG-TLSVKWLVDGKPVHNGPISPTVSVNDRRIEIRNARLSDSGNYVCI 794

Query: 383 AQTE 386
            + E
Sbjct: 795 VENE 798



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 100/405 (24%), Positives = 151/405 (37%), Gaps = 23/405 (5%)

Query: 52   ELFCIFGGTPLPQTIWSKDGVPINPSDR-ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            ++ C   G P P   W ++GV +    R I++      L +     SD G Y C  +N  
Sbjct: 2024 KINCNAYGEPTPVVTWQRNGVRVETGVRYIAEDTI---LTVIETRSSDSGIYVCVATNEA 2080

Query: 111  GEAKSYSIDLSVLAAPYFTV-EPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            G  +  +  L VL AP      P           + +C   G P PEI W  + KPI   
Sbjct: 2081 GTTQQ-AFTLEVLVAPRIVATSPNESVVPVNNPFSLKCGVRGYPFPEIIWTIDDKPIEAE 2139

Query: 170  PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
                        + IE  ++     + C A N  G   K+  V  ++      E  K   
Sbjct: 2140 LGGGFSIAEDGTLFIEKAKEKAVHRFKCTARNDAGIDEKEYVVKAISPPFVTKEGLKTIN 2199

Query: 230  TVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETG--DLKITDVAFADSGEYTC 287
            + +G   +L C + G   P + W  +   ++      +  G   LKI      D G YTC
Sbjct: 2200 STEGDPSLLVCEIEGH-APRIYWYKDGAPISSSPNMEISDGGTQLKIHSSKLHDEGLYTC 2258

Query: 288  FARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS 347
             A N  G A     L V     IT++P    V++GQ A   C AV  P  +  I WL+  
Sbjct: 2259 VAMNTAGNATQKQQLYVGVPPRITEKPRRIIVKSGQPAELWCEAVGIP--QPQIRWLKDD 2316

Query: 348  EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP------ 401
              +   +     ++   +      S  D+G YTC+A            L V +P      
Sbjct: 2317 VALPQTAVDDRSETPKSTAIFPNVSSADAGVYTCKADNWAGTSYKDVDLVVLIPPGIYPE 2376

Query: 402  ---LEAPSNFTLIQVIDAK---KAVVSWNPVSPQSLRGHFRGYKV 440
               L A    TLI   +A    + VVSW  +    + G+   Y++
Sbjct: 2377 MINLTANLEETLILPCNASGIPEPVVSWVKMPNIDIIGNEDKYQI 2421



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 156/380 (41%), Gaps = 22/380 (5%)

Query: 32   APKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINP--SDRISQGNYGKSL 89
            AP+    +  + V   N    L C   G P P+ IW+ D  PI        S    G +L
Sbjct: 2094 APRIVATSPNESVVPVNNPFSLKCGVRGYPFPEIIWTIDDKPIEAELGGGFSIAEDG-TL 2152

Query: 90   IIKHVEFSDQGSYTCEVSNGVG-EAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFEC 147
             I+  +      + C   N  G + K Y +    ++ P+ T E  + IN+ E +     C
Sbjct: 2153 FIEKAKEKAVHRFKCTARNDAGIDEKEYVV--KAISPPFVTKEGLKTINSTEGDPSLLVC 2210

Query: 148  KASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVY 207
            +  G   P I+W  +G PIS + PN     G  ++ I + +  D G Y C A N+ G   
Sbjct: 2211 EIEG-HAPRIYWYKDGAPISSS-PNMEISDGGTQLKIHSSKLHDEGLYTCVAMNTAGNAT 2268

Query: 208  --KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL----TG 261
              + +YV V    P ITE P+      G+   L C   G P+P++ W+ +   L      
Sbjct: 2269 QKQQLYVGV---PPRITEKPRRIIVKSGQPAELWCEAVGIPQPQIRWLKDDVALPQTAVD 2325

Query: 262  GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA 321
             R    ++  +   +V+ AD+G YTC A N  GT+     L V     I  +  +     
Sbjct: 2326 DRSETPKSTAI-FPNVSSADAGVYTCKADNWAGTSYKDVDLVVLIPPGIYPEMINLTANL 2384

Query: 322  GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTC 381
             ++    CNA   P   +S V +   + I  E + + + +   SL +      D G Y C
Sbjct: 2385 EETLILPCNASGIPEPVVSWVKMPNIDIIGNEDKYQILGT---SLAIRNIGPEDDGFYHC 2441

Query: 382  RAQTELDFIEAQATLTVQVP 401
             A++          L+V VP
Sbjct: 2442 IAKSNAGQAIGARRLSVIVP 2461



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 81/347 (23%), Positives = 144/347 (41%), Gaps = 16/347 (4%)

Query: 66  IWSKDGVPI-NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA 124
           +W+K+ +P+ + ++ +   N G+ L+I  V   D+  YTC   N  G+A+  +  LSVL 
Sbjct: 1   MWAKNEIPVVSGTENMQVLNGGRHLLISSVAPHDEAVYTCVARNQAGQARK-NFKLSVLV 59

Query: 125 APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
            P            E  ++   C+  G P P I W  +G+P    P       G  +  I
Sbjct: 60  PPSIIGVGGEHKVVENNSLILPCEVEGYPVPRIDWTKDGRPALSLPLVQTLSEG-QQFKI 118

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTCRVF 243
            +      G+Y C A N +G       V+V+   P + +  KD    +  ++ V  C + 
Sbjct: 119 ISANAQHRGSYMCTALNKVGKAEISFDVDVITR-PTVAQRVKDTVEVIKNESAVFRCPIT 177

Query: 244 GAP-KPEVNWIHNQK--ELTGGRYTILETG-DLKITDVAFADSGEYTCFARNKLGTAQGS 299
                 E+ W+ + +  ++   +Y +   G  L +      D G Y+C  +N  G ++  
Sbjct: 178 DKNFVGEITWLKDFEPIDVHSHKYALSHAGRKLHLLHSELRDEGSYSCRVKNDAGESRVD 237

Query: 300 GSLTVKEHTHITDQPEDYEVEAGQSAT--FRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
             L V     I    +D    A +++T    C A   P  + +I W +  E +  E+  R
Sbjct: 238 YKLLVLVPPEIIMLDKDKNRTAIENSTVLLSCPATGKP--EPTIEWYKDGELLKPENITR 295

Query: 358 FVQSNDY---SLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            ++S       L + +    D+G+YTC A+ +    E    + V  P
Sbjct: 296 RIRSGRLEGNDLRIVRIQVGDTGRYTCEAKNKAGMAEQDVLIYVMTP 342



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 122/288 (42%), Gaps = 30/288 (10%)

Query: 32   APKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLII 91
            AP   Y  R + V  +   V+L C   G P P+  W KDG  +  +   S G +  +L I
Sbjct: 2534 APHFAYTPRTQTVR-KGSIVDLHCSAHGPPTPEIFWMKDGEML--AHERSVGGH-STLRI 2589

Query: 92   KHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVT-----FE 146
            +  + S  G+Y C   N VG +++ +            VE   + A+++ T T       
Sbjct: 2590 EANDKSVGGTYVCIAQNIVGTSRTQA---------RIIVEESGLQASDQRTSTQHIAVLT 2640

Query: 147  CKASGLPEPE-IHWVHNGKPISQAPPNPRRKVGPNR----ITIENLRKSDTGNYGCNATN 201
            C   G+P+ E + W  +G+P++    + +  +  NR      + N+   D  +Y C   N
Sbjct: 2641 CLEDGIPQSESVTWTIHGEPVNNE--DNKLHIMNNRSLVIFDVNNVSPVDLHSYQCYVRN 2698

Query: 202  SLGYVYKDV-YVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAP-KPEVNWIHNQKEL 259
                   DV Y++V+   P++       YT  G  VV+ C + G P   +V W  N   L
Sbjct: 2699 RAQ--SSDVEYMDVVDDLPKVVVHQNKMYTRPGDEVVVDCHLQGNPLTTKVQWTKNNVPL 2756

Query: 260  T-GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE 306
                R T+L    L+I  +  +D   Y C A N  G +     + V++
Sbjct: 2757 VIDERVTVLTNNSLRIKKLRLSDRASYKCRASNSHGKSWDGLDIIVQD 2804



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 102/269 (37%), Gaps = 25/269 (9%)

Query: 125  APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
            AP+F   P      +   V   C A G P PEI W+ +G+ ++      R   G + + I
Sbjct: 2534 APHFAYTPRTQTVRKGSIVDLHCSAHGPPTPEIFWMKDGEMLAHE----RSVGGHSTLRI 2589

Query: 185  ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFG 244
            E   KS  G Y C A N +G       + V     + +    D+ T      VLTC   G
Sbjct: 2590 EANDKSVGGTYVCIAQNIVGTSRTQARIIVEESGLQAS----DQRTSTQHIAVLTCLEDG 2645

Query: 245  APKPE-VNW-IH--------NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLG 294
             P+ E V W IH        N+  +   R  ++      + +V+  D   Y C+ RN+  
Sbjct: 2646 IPQSESVTWTIHGEPVNNEDNKLHIMNNRSLVI----FDVNNVSPVDLHSYQCYVRNRAQ 2701

Query: 295  TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFES 354
            ++       V +   +           G      C+   +P L   + W + + P+  + 
Sbjct: 2702 SSDVEYMDVVDDLPKVVVHQNKMYTRPGDEVVVDCHLQGNP-LTTKVQWTKNNVPLVIDE 2760

Query: 355  EPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
                + +N  SL + K    D   Y CRA
Sbjct: 2761 RVTVLTNN--SLRIKKLRLSDRASYKCRA 2787



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 81/350 (23%), Positives = 124/350 (35%), Gaps = 54/350 (15%)

Query: 53   LFCIFGGTPLPQTIWSKDGVP----INPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
            L C   G P P   W K  +P    I   D+      G SL I+++   D G Y C   +
Sbjct: 2390 LPCNASGIPEPVVSWVK--MPNIDIIGNEDKYQI--LGTSLAIRNIGPEDDGFYHCIAKS 2445

Query: 109  GVGEA-KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPIS 167
              G+A  +  + + V    Y  +  E  +       T+      +PE E + +   +   
Sbjct: 2446 NAGQAIGARRLSVIVPKKDYKVIWVECDDVGNPVKTTYVPARGDMPENEDNLLPWKQDYQ 2505

Query: 168  QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKD 227
              P N     G N I I  L                    ++     L  AP     P+ 
Sbjct: 2506 DLPTN-----GTNGILIRCLPG-----------------VREPRRVPLETAPHFAYTPRT 2543

Query: 228  EYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-----TGGRYTI-LETGDLKITDVAFAD 281
            +    G  V L C   G P PE+ W+ + + L      GG  T+ +E  D  +       
Sbjct: 2544 QTVRKGSIVDLHCSAHGPPTPEIFWMKDGEMLAHERSVGGHSTLRIEANDKSV------- 2596

Query: 282  SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
             G Y C A+N +GT++    + V+E      Q  D        A   C     P  + S+
Sbjct: 2597 GGTYVCIAQNIVGTSRTQARIIVEESGL---QASDQRTSTQHIAVLTCLEDGIPQSE-SV 2652

Query: 342  VWLRGSEPIDFESEPRFVQSNDYSLT--VTKSSELDSGQYTC----RAQT 385
             W    EP++ E     + +N   +   V   S +D   Y C    RAQ+
Sbjct: 2653 TWTIHGEPVNNEDNKLHIMNNRSLVIFDVNNVSPVDLHSYQCYVRNRAQS 2702


>gi|197098048|ref|NP_001124989.1| contactin-1 precursor [Pongo abelii]
 gi|55726605|emb|CAH90067.1| hypothetical protein [Pongo abelii]
          Length = 627

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 175/378 (46%), Gaps = 28/378 (7%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 241 PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 298

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 299 NIQLEDEGIYECEAENIRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 354

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 355 TGKPIPTIRWLKNGYAYHKG------ELRLYDVTFEN-----AGMYQCIAENTYGAIYAN 403

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 404 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 463

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 464 WEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENAT 523

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ VW      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 524 MQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 583

Query: 382 RAQTELDFIEAQATLTVQ 399
            AQT +D   A A L V+
Sbjct: 584 TAQTIVDNSSASADLVVR 601



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 154/378 (40%), Gaps = 34/378 (8%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 189 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVV 246

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  + A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 247 QFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 303

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N  G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 304 DEGIYECEAENIRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 362

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 363 RWLKN-----GYAY---HKGELRLYDVTFENAGMYQCIAENTYGAIYANAELKILALAPT 414

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   D SL 
Sbjct: 415 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 470

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC A+       +  TL +  P   + AP N  +    +A  +   S+
Sbjct: 471 INNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASF 530

Query: 424 NPVSPQSLRGHFRGYKVQ 441
           +P    +    F GY + 
Sbjct: 531 DPALDLTFVWSFNGYVID 548



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 109/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   +     +    VG N +   
Sbjct: 47  PINTIYPE---ESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTS-DRYSMVGGNLVINN 102

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+N+   V          +        + E  V +GK +VL C   +
Sbjct: 103 PDKQKDAGIYYCLASNNYWMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 162

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 163 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 222

Query: 299 SGSLT----VKEHT------HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                    + E T       I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 223 FSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV--PDIRWRKVLE 280

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 281 PMPSTAE---ISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 328


>gi|86565338|ref|NP_001033397.1| Protein SAX-7, isoform d [Caenorhabditis elegans]
 gi|62898587|dbj|BAD97389.1| SAX-7 SHORTFORM [Caenorhabditis elegans]
 gi|351050587|emb|CCD65187.1| Protein SAX-7, isoform d [Caenorhabditis elegans]
          Length = 1147

 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 207/430 (48%), Gaps = 33/430 (7%)

Query: 8   EYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIW 67
           +YK GN+  L  I      S  +  P +QYV +   +AL+  + +L C F G P P+  W
Sbjct: 45  DYKFGNQFSLQ-ITNNKRRSLQQMPPTEQYVNQSSPIALQGNQHKLHCFFSGYPAPKPRW 103

Query: 68  SKDGVPINPSDRISQG----NYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVL 123
             +G  I+  D  + G    +YGK+L+  +V     G Y C  +      +++++   V 
Sbjct: 104 FHNGREIS-EDSDAAGFRFESYGKTLVF-NVTQDKAGKYDCRFATQQDIDRTFNV--VVE 159

Query: 124 AAPYFTV-EPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
           AAPY+ +  P   N +E E V F+C   G P P++ +  NG  I ++  + R  +   R+
Sbjct: 160 AAPYWPLGPPPNTNTSEGEKVIFDCTTYGKPTPKVTFYKNGVEI-ESQKDDRYLIEGTRL 218

Query: 183 TIENLR-----KSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE--YTVDGKT 235
           TI +++     K D   Y C + N  G+++ + Y+N+LA  P++   P  E    V GK 
Sbjct: 219 TIFDVKKGTYGKGDNAVYQCKSENKHGWLWTNFYLNLLAFKPQLLIDPGKEEVEAVAGKK 278

Query: 236 VVLTCRVFGAPKPEVNW----IHNQK--ELTGGRYTILETGDLKITDVAFADSGEYTCFA 289
           V L C+ F +P   V W    I   K  ++    Y +   G L  ++V  A+ GEY C  
Sbjct: 279 VTLECKFFASPNAAVKWEAPMISGSKGNQIPADAYGV---GKLVFSEVTAAEEGEYECIG 335

Query: 290 RNKLGTAQGSGSLTVKEHTHITDQPEDYEVE-AGQSATFRCNAVSDPSLKLSIVWLRG-- 346
            NK G A G  +L V++ T +   P   EV  AG+     C+A +D  L++   WL    
Sbjct: 336 TNKYGQATGLITLKVRKPTIVQPFPRVEEVRMAGEEMRLACDATADNQLEVKYEWLVDGK 395

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-VPLEAP 405
           S P D  S   +   +D+SL ++  ++ D+ +Y C   T+LD +E +  +  + VP+   
Sbjct: 396 SLPEDRISSGHYKIDDDHSLVISNPTQDDTAKYKCVVSTKLDQVEKEIKIQFKDVPVAVH 455

Query: 406 SNFTLIQVID 415
           S +  +Q  D
Sbjct: 456 SAW--VQTCD 463



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 100/228 (43%), Gaps = 40/228 (17%)

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG----------- 448
           VP   PS   +++        ++WN V PQ+  G+F GYK+  W ++             
Sbjct: 677 VPSSIPSGLRVLEK-SGTTVTLAWNGVDPQTANGNFTGYKITYWVDEADQDSDDSSEDDE 735

Query: 449 -----------------EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                            +  IR+ +V    +T   +    PA+ N A +   NGA+ G  
Sbjct: 736 DDEKRKFRWKRSIRVKRQSGIRKTVVFGPSATQGTLTDLKPATLNHAYIQVTNGAHEGSA 795

Query: 492 SEIISFVTPEGVPGTVQSLEAIPLGSS------AFYLKWVKPEQPNGVLMGYKIKYQSVK 545
           S+ I F T EGVP  V+SL A P+ S          L W KP Q NG L  Y+++Y    
Sbjct: 796 SDTIDFQTDEGVPSPVRSLRAYPMNSKVGGEKGVVVLVWKKPRQTNGKLARYEVEYCK-- 853

Query: 546 GTKVGPLLER-LPYIS-DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            T+ G L+E+  P    D  +   ++ GLE  T YR  L  +T AG+G
Sbjct: 854 -TQNGKLVEKSCPRKQIDADSKEIRITGLENETPYRFILRAHTSAGEG 900



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 24/134 (17%)

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGA------ESKYLFYVPFKNPDNVEGRGSTPNN 617
           TT      L+P  KY   +      GD A      + +     P KNPD V  +G++P N
Sbjct: 525 TTGDATVSLQPFGKYVFRVIARNSVGDSAARLAKDQCETPAKQPDKNPDEVAAKGTSPEN 584

Query: 618 LVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ--SELVLANQPT----- 670
           +++ W  M   E N   F Y + +R  +  +      V DW++   E   A++ T     
Sbjct: 585 IIVQWKPMSREEWNGADFHYVVKYRPKDEDQR-----VGDWKEVAVEDPFADRVTVNLDD 639

Query: 671 ------FQPYEIKV 678
                 FQPYE++V
Sbjct: 640 EKDVKPFQPYEVQV 653


>gi|26326581|dbj|BAC27034.1| unnamed protein product [Mus musculus]
 gi|54887350|gb|AAH38036.1| Sdk2 protein [Mus musculus]
          Length = 542

 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 102/301 (33%), Positives = 141/301 (46%), Gaps = 16/301 (5%)

Query: 50  KVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV- 106
           +V + C+    PL +   +W KDG P+  S  IS  +Y + L I +   SD G Y CE  
Sbjct: 236 EVTMECVANARPLIKLHIVWKKDGAPL--SSGIS--DYNRRLTIANPTVSDAGYYECEAM 291

Query: 107 --SNGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPEPEIHWVHNG 163
             S+ V      +  LSVL  P F  EPE  I A  E+ V   C+A G+P P I W  + 
Sbjct: 292 LRSSSVAPVTRGAY-LSVLEPPQFVREPERHITAEMEKVVDIPCRAKGVPPPSITWYKDA 350

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
             +        ++     + I  L   DTG   C A N+ G      Y+ V + AP IT 
Sbjct: 351 ALVEVGKLTRFKQRSDGGLQISGLLPDDTGMLQCFAHNAAGEAQTSTYLAVTSIAPNITR 410

Query: 224 APKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDVA 278
            P D   +DG +VVL C   GAP+P + W   ++ L  G     R+T+LE+G L I+   
Sbjct: 411 GPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLISPTH 470

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            +D+G YTC A N  G  + S  L V   T IT  P+D  V  G  A+  C    DP + 
Sbjct: 471 ISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVCGVTHDPRVT 530

Query: 339 L 339
           +
Sbjct: 531 V 531



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 169/388 (43%), Gaps = 38/388 (9%)

Query: 34  KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
           K+Q V   +   +R  ++  F      P PQ  W +DG  I PS RI+      +L+I  
Sbjct: 124 KRQSVNHGEAAVIRAPRISSF------PRPQVTWFRDGRKIPPSSRIAI-TLENTLVILS 176

Query: 94  VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFINAAEEETV------ 143
               D G Y  + V++  G+ K S  I L+V  +  P   + P  I   +  +V      
Sbjct: 177 TVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSE 236

Query: 144 -TFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
            T EC A+  P  ++H  W  +G P+S    +  R     R+TI N   SD G Y C A 
Sbjct: 237 VTMECVANARPLIKLHIVWKKDGAPLSSGISDYNR-----RLTIANPTVSDAGYYECEAM 291

Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
             ++S+  V +  Y++VL   P+    P+   T + + VV + CR  G P P + W  + 
Sbjct: 292 LRSSSVAPVTRGAYLSVL-EPPQFVREPERHITAEMEKVVDIPCRAKGVPPPSITWYKDA 350

Query: 257 KELTGGRYTILET---GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITD 312
             +  G+ T  +    G L+I+ +   D+G   CFA N  G AQ S  L V     +IT 
Sbjct: 351 ALVEVGKLTRFKQRSDGGLQISGLLPDDTGMLQCFAHNAAGEAQTSTYLAVTSIAPNITR 410

Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTK 370
            P D  V  G S    C     P  + +I W +G   +   S   PRF      SL ++ 
Sbjct: 411 GPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTLLESGSLLISP 468

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTV 398
           +   D+G YTC A       EA A L V
Sbjct: 469 THISDAGTYTCLATNSRGVDEASADLVV 496



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 82/208 (39%), Gaps = 6/208 (2%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           K V++ C   G P P   W KD   V +    R  Q + G  L I  +   D G   C  
Sbjct: 328 KVVDIPCRAKGVPPPSITWYKDAALVEVGKLTRFKQRSDG-GLQISGLLPDDTGMLQCFA 386

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPI 166
            N  GEA++ +       AP  T  P      +  +V   C+ SG P P I W    + +
Sbjct: 387 HNAAGEAQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERIL 446

Query: 167 SQAPPN-PR-RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           +      PR   +    + I     SD G Y C ATNS G       + V A    IT+ 
Sbjct: 447 ASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWART-RITKP 505

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNW 252
           P+D+  + G    + C V   P+  V +
Sbjct: 506 PQDQSVIKGTQASMVCGVTHDPRVTVRY 533



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 106/274 (38%), Gaps = 27/274 (9%)

Query: 126 PYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
           PYF  EP       E   +   C A G    E  W+HN + ++       R     R  I
Sbjct: 30  PYFKTEPVRTQVHLEGNRLVLTCMAEGSWPLEFKWLHNNRELT-------RFSLEYRYMI 82

Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RVF 243
            +L ++  G Y C   N +G + +      +A+     E  K +    G+  V+   R+ 
Sbjct: 83  TSLDRTHAGFYRCIVRNRMGALLQRQTEVQVAYMGSFEEGEKRQSVNHGEAAVIRAPRIS 142

Query: 244 GAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSGS 301
             P+P+V W  + +++    R  I     L I      D+G Y   A N K G  + S  
Sbjct: 143 SFPRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQP 202

Query: 302 LTVK----------EHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEPI 350
           +T+               I   P++  V AG S  T  C A + P +KL IVW +   P+
Sbjct: 203 ITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIVWKKDGAPL 262

Query: 351 DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
                   +   +  LT+   +  D+G Y C A 
Sbjct: 263 S-----SGISDYNRRLTIANPTVSDAGYYECEAM 291


>gi|301760361|ref|XP_002915991.1| PREDICTED: contactin-6-like [Ailuropoda melanoleuca]
          Length = 1028

 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 180/715 (25%), Positives = 299/715 (41%), Gaps = 76/715 (10%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  ++L C   G P+P   W + DG P+    + S+      L I + +  D+G Y 
Sbjct: 239 AAKDSSIKLECFALGNPVPDISWRRLDGNPLPGKVKYSKSQ--AILEIPNFQQEDEGFYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G   +    L   A P +  + +    +  + + +ECKASG P P   W+ NG
Sbjct: 297 CIAGNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDNLFWECKASGKPNPLYTWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++   P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 356 ERLN---PEERIQIENGTLVITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSK 412

Query: 224 AP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL-ETGDLKITDVAFA 280
            P  K+     G  + + C+    P+  ++W    + L   +   L E G LKI +V  +
Sbjct: 413 NPIKKNSVVQVGGDITIECKPNAFPRATISWKRGMESLRQSKRVFLSEDGSLKIYNVTRS 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A+ +GSL VKE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 473 DAGSYTCIATNQFGVAKNTGSLVVKERTVITIPPSKMDVTVGESIVLPCQVSHDPSIEVV 532

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            +W    + ID +       R    +   L +       SG+Y C  +T L+ + A A +
Sbjct: 533 FIWSFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAVADI 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW P S  +     + + +Q  T          ++
Sbjct: 593 IVRGPPGPPEDVR-VEHISSTTSQLSWRPGSDNN--SPIQIFTIQARTPFSVGWQAVSTV 649

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLE 511
            E++   G++    V    P  +   RV+A N    G PS+    + T   VP    +  
Sbjct: 650 PEIL--SGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTNI 707

Query: 512 AIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
               GS S   + W  +  E  NG   GY I  + V  T      ER+P + + +    +
Sbjct: 708 NGGGGSRSELVITWESIPEELQNGEEFGYIIMLRPVGSTAWTK--ERVPSV-ESSRFVYR 764

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESKY-LFYV----PFKNPDNVEGRGSTPNNLVISWT 623
              + P + + + +  Y   G+G+ S   + Y     P + P     +  + + + +SW 
Sbjct: 765 NESITPLSPFEVKVGVYNNEGEGSLSTVSIVYSGEDEPQQAPRGTSVQSFSASEMEVSWK 824

Query: 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWT 683
           A+                       AWN       R +  VL        YE   V  WT
Sbjct: 825 AI-----------------------AWN-------RNTGRVLG-------YE---VLYWT 844

Query: 684 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           +   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S  ++  T
Sbjct: 845 DDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGAGPSSPPVNVTT 898



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 165/660 (25%), Positives = 254/660 (38%), Gaps = 87/660 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC ++N   EA+      SV   P   V+                
Sbjct: 180 NLYIAKVEPSDVGNYTCFITN--KEAQR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 232

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ ++  EC A G P P+I W   +G P+   P   +       + I N ++
Sbjct: 233 FPETIQAAKDSSIKLECFALGNPVPDISWRRLDGNPL---PGKVKYSKSQAILEIPNFQQ 289

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A N  G       + +    PE  +  ++ Y      +   C+  G P P 
Sbjct: 290 EDEGFYECIAGNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDNLFWECKASGKPNPL 348

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L       +E G L IT +  +DSG Y C A NK      +  L V     
Sbjct: 349 YTWLKNGERLNPEERIQIENGTLVITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAP 408

Query: 309 HITDQP--EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P  ++  V+ G   T  C   + P  + +I W RG E        R   S D SL
Sbjct: 409 DFSKNPIKKNSVVQVGGDITIECKPNAFP--RATISWKRGME--SLRQSKRVFLSEDGSL 464

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV------ 420
            +   +  D+G YTC A  +    +   +L V+         T+I +  +K  V      
Sbjct: 465 KIYNVTRSDAGSYTCIATNQFGVAKNTGSLVVK-------ERTVITIPPSKMDVTVGESI 517

Query: 421 -----VSWNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKF 470
                VS +P         F G  +         E+ G  S+ +L++   +       K+
Sbjct: 518 VLPCQVSHDPSIEVVFIWSFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQ--LNHSGKY 575

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
           +   K     L+            ++ +   G PG  + +    + S+   L W      
Sbjct: 576 LCTVKTTLESLS-----------AVADIIVRGPPGPPEDVRVEHISSTTSQLSWRPGSDN 624

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           N  +  + I  Q+     VG   +  +P I    T +A + GL P  +Y   +      G
Sbjct: 625 NSPIQIFTI--QARTPFSVGWQAVSTVPEILSGKTYNATVVGLSPWVEYEFRVVAGNSIG 682

Query: 590 DGAESKY------LFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  SK          VP   P N+ G G + + LVI+W ++PE   N   F Y I  R 
Sbjct: 683 IGEPSKASELLRTKASVPVVAPTNINGGGGSRSELVITWESIPEELQNGEEFGYIIMLRP 742

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
             +  AW ++ V     S  V  N+      P+E+KV       +GEGS+  + IV  GE
Sbjct: 743 VGS-TAWTKERVPSVESSRFVYRNESITPLSPFEVKV--GVYNNEGEGSLSTVSIVYSGE 799



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 155/638 (24%), Positives = 251/638 (39%), Gaps = 79/638 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +NP +RI   N   +L+I  +  SD G Y C   N   +  
Sbjct: 339 CKASGKPNPLYTWLKNGERLNPEERIQIEN--GTLVITMLNVSDSGVYQCAAENKY-QII 395

Query: 115 SYSIDLSVLA-APYFTVEPEFINAAEE--ETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
             + +L VLA AP F+  P   N+  +    +T ECK +  P   I W    + + Q+  
Sbjct: 396 YANAELRVLASAPDFSKNPIKKNSVVQVGGDITIECKPNAFPRATISWKRGMESLRQSKR 455

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
               + G   + I N+ +SD G+Y C ATN  G V K+    V+     IT  P      
Sbjct: 456 VFLSEDG--SLKIYNVTRSDAGSYTCIATNQFG-VAKNTGSLVVKERTVITIPPSKMDVT 512

Query: 232 DGKTVVLTCRVFGAPKPEVNWIHN-------------QKELTGGRYTILETGDLKITDVA 278
            G+++VL C+V   P  EV +I +               E  GG       GDL I ++ 
Sbjct: 513 VGESIVLPCQVSHDPSIEVVFIWSFNGDVIDLKKGVAHFERIGGE----SVGDLMIRNIQ 568

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSDPS 336
              SG+Y C  +  L +      + V+        PED  VE   S T + +    SD +
Sbjct: 569 LNHSGKYLCTVKTTLESLSAVADIIVRGPP---GPPEDVRVEHISSTTSQLSWRPGSDNN 625

Query: 337 LKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
             + I  ++   P         + P  +    Y+ TV   S     ++   A   +   E
Sbjct: 626 SPIQIFTIQARTPFSVGWQAVSTVPEILSGKTYNATVVGLSPWVEYEFRVVAGNSIGIGE 685

Query: 392 ---AQATLTVQ--VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ----- 441
              A   L  +  VP+ AP+N          + V++W  +  +   G   GY +      
Sbjct: 686 PSKASELLRTKASVPVVAPTNINGGGG-SRSELVITWESIPEELQNGEEFGYIIMLRPVG 744

Query: 442 --TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
              WT++          V + ES T       P S    +V  +N    G  S +    +
Sbjct: 745 STAWTKERVPSVESSRFVYRNESIT-------PLSPFEVKVGVYNNEGEGSLSTVSIVYS 797

Query: 500 PEGVP------GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKVGP 551
            E  P       +VQS  A  +  S   + W    +  G ++GY++ Y     K + +G 
Sbjct: 798 GEDEPQQAPRGTSVQSFSASEMEVSWKAIAW---NRNTGRVLGYEVLYWTDDSKESMIGK 854

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPD 606
           +      +S   TT   + GL+ +T Y   +  Y  AG G  S  +        P + P 
Sbjct: 855 I-----RVSGNVTTK-NITGLKANTIYFASVRAYNTAGAGPSSPPVNVTTKKSPPSQPPA 908

Query: 607 NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           N+  +  T + L ++W  +  +E+ +    Y+I +R++
Sbjct: 909 NIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQN 945



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 107/288 (37%), Gaps = 36/288 (12%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L+ P FT EP+   F     E  +   C ASG P P   W  NG  I        R  G
Sbjct: 22  LLSRPIFTQEPQDVIFPLDLSESEIILNCAASGYPSPHYRWKQNGTDIDFTMSYHYRLDG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N          D G Y C ATN+LG +         A+  +     +   +V +G+ VV
Sbjct: 82  GNLAISSPHTDQDIGMYQCLATNTLGTILSRKAKLQFAYIEDFETKTRSAVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        W  N   L       R+   ETG+L I  V  +D G YTCF
Sbjct: 142 LLC----GPPPHFGDLFYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCF 197

Query: 289 ARNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSL 337
             NK    + QG  +  V+    +  +         PE  +     S    C A+ +P  
Sbjct: 198 ITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSIKLECFALGNPVP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQ--SNDYSLTVTKSSELDSGQYTCRA 383
            +S  W R    +D    P  V+   +   L +    + D G Y C A
Sbjct: 258 DIS--WRR----LDGNPLPGKVKYSKSQAILEIPNFQQEDEGFYECIA 299



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 91/382 (23%), Positives = 136/382 (35%), Gaps = 48/382 (12%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSD----RISQGNYGKSLIIKHVEFSDQGS 101
           L   ++ L C   G P P   W ++G  I+ +     R+  GN   S    H +  D G 
Sbjct: 41  LSESEIILNCAASGYPSPHYRWKQNGTDIDFTMSYHYRLDGGNLAISS--PHTD-QDIGM 97

Query: 102 YTCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPEI--- 157
           Y C  +N +G   S    L       F T     ++  E + V   C     P P     
Sbjct: 98  YQCLATNTLGTILSRKAKLQFAYIEDFETKTRSAVSVREGQGVVLLCG----PPPHFGDL 153

Query: 158 --HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY-------- 205
              W  N  P+     N RR V      + I  +  SD GNY C  TN            
Sbjct: 154 FYAWTFNDNPLYVQEDN-RRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPPT 212

Query: 206 --------VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQ 256
                   V  +    +    PE  +A KD       ++ L C   G P P+++W   + 
Sbjct: 213 PLVQRTDGVMGEYEPKIEVRFPETIQAAKD------SSIKLECFALGNPVPDISWRRLDG 266

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
             L G          L+I +    D G Y C A N  G     G L          + ++
Sbjct: 267 NPLPGKVKYSKSQAILEIPNFQQEDEGFYECIAGNLRGRNLAKGQLIFYAPPEWEQKIQN 326

Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
             +    +  + C A   P+   +  WL+  E ++ E     +Q  + +L +T  +  DS
Sbjct: 327 TYLSIYDNLFWECKASGKPNPLYT--WLKNGERLNPEER---IQIENGTLVITMLNVSDS 381

Query: 377 GQYTCRAQTELDFIEAQATLTV 398
           G Y C A+ +   I A A L V
Sbjct: 382 GVYQCAAENKYQIIYANAELRV 403



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 106/242 (43%), Gaps = 17/242 (7%)

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDA 416
           RFV  N+ S+T     E+  G Y    +  L  +    +   + P +AP   T +Q   A
Sbjct: 760 RFVYRNE-SITPLSPFEVKVGVYNNEGEGSLSTVSIVYSGEDE-PQQAPRG-TSVQSFSA 816

Query: 417 KKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
            +  VSW  ++     G   GY+V  WT+   E  I ++ V+ G  TT  +      +  
Sbjct: 817 SEMEVSWKAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVS-GNVTTKNITGLKANTIY 875

Query: 477 FARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVL 534
           FA V A+N A  GP S  ++  T +  P    +  A  L +S   L W  VK  +    +
Sbjct: 876 FASVRAYNTAGAGPSSPPVNVTTKKSPPSQPPANIAWKLTNSKLCLNWEHVKTMENESEV 935

Query: 535 MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGYTKAGDGAE 593
           +GYKI Y+  + +K         +I +   TSA+L  L P    Y I +   +  GDG+ 
Sbjct: 936 LGYKILYRQNRQSKT--------HILETNNTSAEL--LVPFEEDYLIEIRTVSDGGDGSS 985

Query: 594 SK 595
           S+
Sbjct: 986 SE 987


>gi|149036846|gb|EDL91464.1| rCG56227 [Rattus norvegicus]
          Length = 1041

 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 181/722 (25%), Positives = 298/722 (41%), Gaps = 88/722 (12%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    ++   N   +L I   +  D+G Y 
Sbjct: 250 AAKDSSVKLECFALGNPVPDISWRRLDGSPM--PGKVKYSNSQATLEIPKFQQEDEGFYE 307

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G   +    L   A P +  + +    +  +++ +ECKASG P P   W+ NG
Sbjct: 308 CVAGNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDSLFWECKASGNPNPSYTWLKNG 366

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++      R +     + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 367 ERLNT---EERIQTENGTLIITMLNVSDSGIYQCAAENKYQTIYANAELRVLASAPDFSK 423

Query: 224 APKDEYTVD----GKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVA 278
            P  +        G  + + C+    PK  ++W    + L    R   LE G LKI +V 
Sbjct: 424 NPIKKXXXXXXXXGGDISIECKPNAFPKASISWKRGTENLKQSKRVFFLEDGSLKICNVT 483

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            +D+G YTC A N+ G  + SGSL VKE T IT  P   +V  G+S    C    DP+++
Sbjct: 484 RSDAGSYTCVATNQFGNGKSSGSLIVKERTVITVPPSKMDVTVGESIVLPCQVSHDPTME 543

Query: 339 LSIVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +  VW    + ID +       R    +   L +       SG+Y C  QT L+ + A A
Sbjct: 544 VLFVWYFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVA 603

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD----GEG 450
            + V+ P   P +   ++ I +  + +SW P  P +     + + +QT T          
Sbjct: 604 DIIVRGPPGPPEDVK-VEHISSTTSQLSWRP-GPDN-NSPIQIFTIQTRTPFSVGWQAVA 660

Query: 451 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQ- 508
           ++ E++   G++    V    P  +   RV+A N    G PS+    + T   +P     
Sbjct: 661 TVPEIL--NGQTYNATVIGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASIPNVAPV 718

Query: 509 SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT-----KVGPLLERLPYISD 561
           ++       S   + W  +  E  NG   GY I ++ V  T     KV  L+E   +I  
Sbjct: 719 NINGGGGSRSELVITWEPIPEELQNGEGFGYIIMFRPVGSTTWMKEKVA-LVESSKFI-- 775

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGST-----PN 616
                 +   + P + + + +  Y   G+G+ S        ++   +  RG++      +
Sbjct: 776 -----YRNESIMPLSPFEVKVGVYNNEGEGSLSTVSIVYSGEDEPRLAPRGTSVQSFSAS 830

Query: 617 NLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEI 676
           ++ +SW A+                       AWN       R +  VL        YE 
Sbjct: 831 DMEVSWNAI-----------------------AWN-------RNTGRVLG-------YE- 852

Query: 677 KVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 736
             V  WT+   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S  ++ 
Sbjct: 853 --VLYWTDNSKESMIGKIRVS-GNVTTKNITGLRANTIYFASVRAYNTAGTGPSSPPVNV 909

Query: 737 VT 738
            T
Sbjct: 910 TT 911



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 162/662 (24%), Positives = 255/662 (38%), Gaps = 89/662 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC V+N   EA       SV   P   V+                
Sbjct: 191 NLYIAKVEPSDVGNYTCFVTNK--EAHR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 243

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ +V  EC A G P P+I W   +G P+   P   +       + I   ++
Sbjct: 244 FPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPM---PGKVKYSNSQATLEIPKFQQ 300

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A N  G       + +    PE  +  ++ Y     ++   C+  G P P 
Sbjct: 301 EDEGFYECVAGNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDSLFWECKASGNPNPS 359

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L        E G L IT +  +DSG Y C A NK  T   +  L V     
Sbjct: 360 YTWLKNGERLNTEERIQTENGTLIITMLNVSDSGIYQCAAENKYQTIYANAELRVLASAP 419

Query: 309 ----HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDY 364
               +   +        G   +  C   + P  K SI W RG+E  + +   R     D 
Sbjct: 420 DFSKNPIKKXXXXXXXXGGDISIECKPNAFP--KASISWKRGTE--NLKQSKRVFFLEDG 475

Query: 365 SLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV---- 420
           SL +   +  D+G YTC A  +    ++  +L V+         T+I V  +K  V    
Sbjct: 476 SLKICNVTRSDAGSYTCVATNQFGNGKSSGSLIVK-------ERTVITVPPSKMDVTVGE 528

Query: 421 -------VSWNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVD 468
                  VS +P        +F G  +         E+ G  S+ +L++   +       
Sbjct: 529 SIVLPCQVSHDPTMEVLFVWYFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQ--LGHSG 586

Query: 469 KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPE 528
           K++   +     L+            ++ +   G PG  + ++   + S+   L W    
Sbjct: 587 KYLCTVQTTLERLS-----------AVADIIVRGPPGPPEDVKVEHISSTTSQLSWRPGP 635

Query: 529 QPNGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
             N  +  + I  Q+     VG   +  +P I +  T +A + GL P  +Y   +     
Sbjct: 636 DNNSPIQIFTI--QTRTPFSVGWQAVATVPEILNGQTYNATVIGLSPWVEYEFRVVAGNN 693

Query: 588 AGDGAESK------YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            G G  SK          +P   P N+ G G + + LVI+W  +PE   N   F Y I +
Sbjct: 694 IGIGEPSKPSELLRTKASIPNVAPVNINGGGGSRSELVITWEPIPEELQNGEGFGYIIMF 753

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNK 698
           R   +   W ++ V     S+ +  N+      P+E+KV       +GEGS+  + IV  
Sbjct: 754 RPVGS-TTWMKEKVALVESSKFIYRNESIMPLSPFEVKV--GVYNNEGEGSLSTVSIVYS 810

Query: 699 GE 700
           GE
Sbjct: 811 GE 812



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 146/640 (22%), Positives = 243/640 (37%), Gaps = 81/640 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +N  +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 350 CKASGNPNPSYTWLKNGERLNTEERIQTEN--GTLIITMLNVSDSGIYQCAAENKY-QTI 406

Query: 115 SYSIDLSVLA-APYFTVEP----EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
             + +L VLA AP F+  P              ++ ECK +  P+  I W    + + Q+
Sbjct: 407 YANAELRVLASAPDFSKNPIKKXXXXXXXXGGDISIECKPNAFPKASISWKRGTENLKQS 466

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
                 + G  +I   N+ +SD G+Y C ATN  G   K     ++     IT  P    
Sbjct: 467 KRVFFLEDGSLKIC--NVTRSDAGSYTCVATNQFGN-GKSSGSLIVKERTVITVPPSKMD 523

Query: 230 TVDGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITD 276
              G+++VL C+V   P  EV   W  N             E  GG       GDL I +
Sbjct: 524 VTVGESIVLPCQVSHDPTMEVLFVWYFNGDVIDLKKGVAHFERIGGE----SVGDLMIRN 579

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT----FRCNAV 332
           +    SG+Y C  +  L        + V+        PED +VE   S T    +R    
Sbjct: 580 IQLGHSGKYLCTVQTTLERLSAVADIIVRGPP---GPPEDVKVEHISSTTSQLSWRPGPD 636

Query: 333 SDPSLKLSIVWLRGSEPIDFE---SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
           ++  +++  +  R    + ++   + P  +    Y+ TV   S     ++   A   +  
Sbjct: 637 NNSPIQIFTIQTRTPFSVGWQAVATVPEILNGQTYNATVIGLSPWVEYEFRVVAGNNIGI 696

Query: 390 IEAQA-----TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ--- 441
            E             +P  AP N          + V++W P+  +   G   GY +    
Sbjct: 697 GEPSKPSELLRTKASIPNVAPVNINGGGG-SRSELVITWEPIPEELQNGEGFGYIIMFRP 755

Query: 442 ----TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
               TW ++          + + ES        +P S    +V  +N    G  S +   
Sbjct: 756 VGSTTWMKEKVALVESSKFIYRNES-------IMPLSPFEVKVGVYNNEGEGSLSTVSIV 808

Query: 498 VTPEGVP------GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKV 549
            + E  P       +VQS  A  +  S   + W    +  G ++GY++ Y   + K + +
Sbjct: 809 YSGEDEPRLAPRGTSVQSFSASDMEVSWNAIAW---NRNTGRVLGYEVLYWTDNSKESMI 865

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKN 604
           G +      +S   TT   + GL  +T Y   +  Y  AG G  S  +        P + 
Sbjct: 866 GKI-----RVSGNVTTK-NITGLRANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQP 919

Query: 605 PDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           P N+  + S  + L ++W  +  +E+ +    Y+I +R++
Sbjct: 920 PANIAWKLSN-SKLCLNWEHVKTMENESEVLGYKILYRQN 958



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 137/378 (36%), Gaps = 40/378 (10%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS-DQGSYTC 104
           L   ++ L C   G P P   W ++G  I+ S        G SL I       D G Y C
Sbjct: 52  LSRSEIILSCTASGYPSPHYRWKQNGTDIDFSMTYHYRLDGGSLAISSPRTDQDIGIYQC 111

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHW 159
             +N VG   S    L       F T     ++  E + V   C   G P    E    W
Sbjct: 112 LATNPVGTILSRKAKLQFAYIEDFETKSRSTVSVREGQGVVLLC---GPPPHFGELSYDW 168

Query: 160 VHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGY------------ 205
             N  P+     + RR V  N   + I  +  SD GNY C  TN   +            
Sbjct: 169 TFNDNPL-YVQEDKRRFVSQNTGNLYIAKVEPSDVGNYTCFVTNKEAHRSVQGPPTPLVQ 227

Query: 206 ----VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG 261
               V  +    +    PE  +A KD       +V L C   G P P+++W         
Sbjct: 228 RTDGVMGEYEPKIEVRFPETIQAAKD------SSVKLECFALGNPVPDISWRRLDGSPMP 281

Query: 262 GRYTILET-GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
           G+     +   L+I      D G Y C A N  G     G L          + ++  + 
Sbjct: 282 GKVKYSNSQATLEIPKFQQEDEGFYECVAGNLRGRNLAKGQLIFYAPPEWEQKIQNTYLS 341

Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
              S  + C A  +P+   S  WL+  E ++ E     +Q+ + +L +T  +  DSG Y 
Sbjct: 342 IYDSLFWECKASGNPN--PSYTWLKNGERLNTEER---IQTENGTLIITMLNVSDSGIYQ 396

Query: 381 CRAQTELDFIEAQATLTV 398
           C A+ +   I A A L V
Sbjct: 397 CAAENKYQTIYANAELRV 414



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 106/289 (36%), Gaps = 36/289 (12%)

Query: 121 SVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
           S    P F  EP+   F        +   C ASG P P   W  NG  I  +     R  
Sbjct: 32  SRFTRPIFIQEPQDVIFPLDLSRSEIILSCTASGYPSPHYRWKQNGTDIDFSMTYHYRLD 91

Query: 178 GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTV 236
           G +          D G Y C ATN +G +         A+  +     +   +V +G+ V
Sbjct: 92  GGSLAISSPRTDQDIGIYQCLATNPVGTILSRKAKLQFAYIEDFETKSRSTVSVREGQGV 151

Query: 237 VLTCRVFGAPKPEV-----NWIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTC 287
           VL C     P P       +W  N   L       R+    TG+L I  V  +D G YTC
Sbjct: 152 VLLC----GPPPHFGELSYDWTFNDNPLYVQEDKRRFVSQNTGNLYIAKVEPSDVGNYTC 207

Query: 288 FARNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPS 336
           F  NK    + QG  +  V+    +  +         PE  +     S    C A+ +P 
Sbjct: 208 FVTNKEAHRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPV 267

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQ--SNDYSLTVTKSSELDSGQYTCRA 383
             +S  W R    +D    P  V+  ++  +L + K  + D G Y C A
Sbjct: 268 PDIS--WRR----LDGSPMPGKVKYSNSQATLEIPKFQQEDEGFYECVA 310



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 14/190 (7%)

Query: 409  TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
            T +Q   A    VSWN ++     G   GY+V  WT+   E  I ++ V+ G  TT  + 
Sbjct: 822  TSVQSFSASDMEVSWNAIAWNRNTGRVLGYEVLYWTDNSKESMIGKIRVS-GNVTTKNIT 880

Query: 469  KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VK 526
                 +  FA V A+N A  GP S  ++  T +  P    +  A  L +S   L W  VK
Sbjct: 881  GLRANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLSNSKLCLNWEHVK 940

Query: 527  PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGY 585
              +    ++GYKI Y+  + +K         ++ +   TSA+L  L P    Y I +   
Sbjct: 941  TMENESEVLGYKILYRQNRQSKT--------HVLETNNTSAEL--LVPFEEDYLIEIRTV 990

Query: 586  TKAGDGAESK 595
            +  GDG+ S+
Sbjct: 991  SDGGDGSSSE 1000


>gi|426224677|ref|XP_004006495.1| PREDICTED: contactin-1 isoform 4 [Ovis aries]
 gi|426224679|ref|XP_004006496.1| PREDICTED: contactin-1 isoform 5 [Ovis aries]
          Length = 627

 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 174/378 (46%), Gaps = 28/378 (7%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 241 PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 298

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 299 NIQLEDEGIYECEAENNRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 354

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG          R ++    +T EN      G Y C A N+ G +Y +
Sbjct: 355 TGKPIPTIRWLKNGYSYH------RGELRLYDVTFEN-----AGMYQCIAENTHGAIYAN 403

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+  W    + L    R  I
Sbjct: 404 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFLWSKGTERLVNSSRILI 463

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++  +D G YTCF  N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 464 WEDGSLEINNITRSDGGVYTCFVENNKGKANSTGTLVITDPTRIILAPINADITVGENAT 523

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ VW      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 524 MQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 583

Query: 382 RAQTELDFIEAQATLTVQ 399
            AQT +D   A A L V+
Sbjct: 584 TAQTIVDNSSASADLVVR 601



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 154/378 (40%), Gaps = 34/378 (8%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 189 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTKPYPADIVV 246

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  + A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 247 QFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 303

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N+ G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 304 DEGIYECEAENNRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 362

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 363 RWLKN-----GYSY---HRGELRLYDVTFENAGMYQCIAENTHGAIYANAELKILALAPT 414

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K   +W +G+E +   S  R +   D SL 
Sbjct: 415 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKF--LWSKGTERLVNSS--RILIWEDGSLE 470

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC  +       +  TL +  P   + AP N  +    +A  +   S+
Sbjct: 471 INNITRSDGGVYTCFVENNKGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASF 530

Query: 424 NPVSPQSLRGHFRGYKVQ 441
           +P    +    F GY + 
Sbjct: 531 DPALDLTFVWSFNGYVID 548



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 139/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   I+  SDR S    G +L+I + +   D G Y C  S
Sbjct: 60  KVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 117

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 118 NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 171

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 172 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 228

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 229 LIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 288

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 289 STSGAVLKIFNIQLEDEGIYECEAENNRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 348

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+         E R      Y +T       ++G Y C A+ 
Sbjct: 349 YWPCVATGKPI--PTIRWLKNGYSYH-RGELRL-----YDVTFE-----NAGMYQCIAEN 395

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 396 THGAIYANAELKI 408



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   I     +    VG N +   
Sbjct: 47  PINTIYPE---ESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTS-DRYSMVGGNLVINN 102

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   +
Sbjct: 103 PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 162

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 163 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 222

Query: 299 SGSL---------TVKEH-THITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                        T K +   I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 223 FSKFIPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV--PDIRWRKVLE 280

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 281 PMPSTAE---ISTSGAVLKIFNIQLEDEGIYECEAENNRGKDKHQARIYVQ 328


>gi|410046837|ref|XP_003952269.1| PREDICTED: contactin-1 [Pan troglodytes]
 gi|410046839|ref|XP_003952270.1| PREDICTED: contactin-1 [Pan troglodytes]
          Length = 627

 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 175/378 (46%), Gaps = 28/378 (7%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 241 PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 298

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 299 NIQLEDEGIYECEAENIRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 354

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 355 TGKPIPTIRWLKNGYAYHKG------ELRLYDVTFEN-----AGMYQCIAENTYGAIYAN 403

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 404 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 463

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 464 WEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENAT 523

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ VW      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 524 MQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 583

Query: 382 RAQTELDFIEAQATLTVQ 399
            AQT +D   A A L V+
Sbjct: 584 TAQTIVDNSSASADLVVR 601



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 154/378 (40%), Gaps = 34/378 (8%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 189 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVV 246

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  + A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 247 QFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 303

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N  G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 304 DEGIYECEAENIRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 362

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 363 RWLKN-----GYAY---HKGELRLYDVTFENAGMYQCIAENTYGAIYANAELKILALAPT 414

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   D SL 
Sbjct: 415 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 470

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC A+       +  TL +  P   + AP N  +    +A  +   S+
Sbjct: 471 INNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASF 530

Query: 424 NPVSPQSLRGHFRGYKVQ 441
           +P    +    F GY + 
Sbjct: 531 DPALDLTFVWSFNGYVID 548



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 140/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   ++  SDR S    G +L+I + +   D G Y C  S
Sbjct: 60  KVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 117

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 118 NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 171

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 172 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 228

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 229 LIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 288

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 289 STSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 348

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+       + E R      Y +T       ++G Y C A+ 
Sbjct: 349 YWPCVATGKPI--PTIRWLKNGYAYH-KGELRL-----YDVTFE-----NAGMYQCIAEN 395

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 396 TYGAIYANAELKI 408



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   +     +    VG N +   
Sbjct: 47  PINTIYPE---ESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTS-DRYSMVGGNLVINN 102

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   +
Sbjct: 103 PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 162

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 163 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 222

Query: 299 SGSLT----VKEHT------HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                    + E T       I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 223 FSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV--PDIRWRKVLE 280

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 281 PMPSTAE---ISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 328


>gi|86565332|ref|NP_001033394.1| Protein SAX-7, isoform a [Caenorhabditis elegans]
 gi|351050584|emb|CCD65184.1| Protein SAX-7, isoform a [Caenorhabditis elegans]
          Length = 1144

 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 207/430 (48%), Gaps = 33/430 (7%)

Query: 8   EYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIW 67
           +YK GN+  L  I      S  +  P +QYV +   +AL+  + +L C F G P P+  W
Sbjct: 45  DYKFGNQFSLQ-ITNNKRRSLQQMPPTEQYVNQSSPIALQGNQHKLHCFFSGYPAPKPRW 103

Query: 68  SKDGVPINPSDRISQG----NYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVL 123
             +G  I+  D  + G    +YGK+L+  +V     G Y C  +      +++++   V 
Sbjct: 104 FHNGREIS-EDSDAAGFRFESYGKTLVF-NVTQDKAGKYDCRFATQQDIDRTFNV--VVE 159

Query: 124 AAPYFTV-EPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
           AAPY+ +  P   N +E E V F+C   G P P++ +  NG  I ++  + R  +   R+
Sbjct: 160 AAPYWPLGPPPNTNTSEGEKVIFDCTTYGKPTPKVTFYKNGVEI-ESQKDDRYLIEGTRL 218

Query: 183 TIENLR-----KSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE--YTVDGKT 235
           TI +++     K D   Y C + N  G+++ + Y+N+LA  P++   P  E    V GK 
Sbjct: 219 TIFDVKKGTYGKGDNAVYQCKSENKHGWLWTNFYLNLLAFKPQLLIDPGKEEVEAVAGKK 278

Query: 236 VVLTCRVFGAPKPEVNW----IHNQK--ELTGGRYTILETGDLKITDVAFADSGEYTCFA 289
           V L C+ F +P   V W    I   K  ++    Y +   G L  ++V  A+ GEY C  
Sbjct: 279 VTLECKFFASPNAAVKWEAPMISGSKGNQIPADAYGV---GKLVFSEVTAAEEGEYECIG 335

Query: 290 RNKLGTAQGSGSLTVKEHTHITDQPEDYEVE-AGQSATFRCNAVSDPSLKLSIVWLRG-- 346
            NK G A G  +L V++ T +   P   EV  AG+     C+A +D  L++   WL    
Sbjct: 336 TNKYGQATGLITLKVRKPTIVQPFPRVEEVRMAGEEMRLACDATADNQLEVKYEWLVDGK 395

Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-VPLEAP 405
           S P D  S   +   +D+SL ++  ++ D+ +Y C   T+LD +E +  +  + VP+   
Sbjct: 396 SLPEDRISSGHYKIDDDHSLVISNPTQDDTAKYKCVVSTKLDQVEKEIKIQFKDVPVAVH 455

Query: 406 SNFTLIQVID 415
           S +  +Q  D
Sbjct: 456 SAW--VQTCD 463



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 100/228 (43%), Gaps = 40/228 (17%)

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG----------- 448
           VP   PS   +++        ++WN V PQ+  G+F GYK+  W ++             
Sbjct: 677 VPSSIPSGLRVLEK-SGTTVTLAWNGVDPQTANGNFTGYKITYWVDEADQDSDDSSEDDE 735

Query: 449 -----------------EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
                            +  IR+ +V    +T   +    PA+ N A +   NGA+ G  
Sbjct: 736 DDEKRKFRWKRSIRVKRQSGIRKTVVFGPSATQGTLTDLKPATLNHAYIQVTNGAHEGSA 795

Query: 492 SEIISFVTPEGVPGTVQSLEAIPLGSS------AFYLKWVKPEQPNGVLMGYKIKYQSVK 545
           S+ I F T EGVP  V+SL A P+ S          L W KP Q NG L  Y+++Y    
Sbjct: 796 SDTIDFQTDEGVPSPVRSLRAYPMNSKVGGEKGVVVLVWKKPRQTNGKLARYEVEYCK-- 853

Query: 546 GTKVGPLLER-LPYIS-DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            T+ G L+E+  P    D  +   ++ GLE  T YR  L  +T AG+G
Sbjct: 854 -TQNGKLVEKSCPRKQIDADSKEIRITGLENETPYRFILRAHTSAGEG 900



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 24/134 (17%)

Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGA------ESKYLFYVPFKNPDNVEGRGSTPNN 617
           TT      L+P  KY   +      GD A      + +     P KNPD V  +G++P N
Sbjct: 525 TTGDATVSLQPFGKYVFRVIARNSVGDSAARLAKDQCETPAKQPDKNPDEVAAKGTSPEN 584

Query: 618 LVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ--SELVLANQPT----- 670
           +++ W  M   E N   F Y + +R  +  +      V DW++   E   A++ T     
Sbjct: 585 IIVQWKPMSREEWNGADFHYVVKYRPKDEDQR-----VGDWKEVAVEDPFADRVTVNLDD 639

Query: 671 ------FQPYEIKV 678
                 FQPYE++V
Sbjct: 640 EKDVKPFQPYEVQV 653


>gi|366039949|ref|NP_001242992.1| contactin-1 isoform 3 precursor [Homo sapiens]
 gi|366039951|ref|NP_001242993.1| contactin-1 isoform 3 precursor [Homo sapiens]
 gi|22477205|gb|AAH36569.1| CNTN1 protein [Homo sapiens]
 gi|158260419|dbj|BAF82387.1| unnamed protein product [Homo sapiens]
          Length = 627

 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 175/378 (46%), Gaps = 28/378 (7%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 241 PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 298

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 299 NIQLEDEGIYECEAENIRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 354

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 355 TGKPIPTIRWLKNGYAYHKG------ELRLYDVTFEN-----AGMYQCIAENTYGAIYAN 403

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 404 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 463

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 464 WEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENAT 523

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ VW      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 524 MQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 583

Query: 382 RAQTELDFIEAQATLTVQ 399
            AQT +D   A A L V+
Sbjct: 584 TAQTIVDNSSASADLVVR 601



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 154/378 (40%), Gaps = 34/378 (8%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 189 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVV 246

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  + A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 247 QFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 303

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N  G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 304 DEGIYECEAENIRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 362

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 363 RWLKN-----GYAY---HKGELRLYDVTFENAGMYQCIAENTYGAIYANAELKILALAPT 414

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   D SL 
Sbjct: 415 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 470

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC A+       +  TL +  P   + AP N  +    +A  +   S+
Sbjct: 471 INNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASF 530

Query: 424 NPVSPQSLRGHFRGYKVQ 441
           +P    +    F GY + 
Sbjct: 531 DPALDLTFVWSFNGYVID 548



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 140/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   ++  SDR S    G +L+I + +   D G Y C  S
Sbjct: 60  KVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 117

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 118 NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 171

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 172 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 228

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 229 LIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 288

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 289 STSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 348

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+       + E R      Y +T       ++G Y C A+ 
Sbjct: 349 YWPCVATGKPI--PTIRWLKNGYAYH-KGELRL-----YDVTFE-----NAGMYQCIAEN 395

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 396 TYGAIYANAELKI 408



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 113/291 (38%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   +     +    VG N +   
Sbjct: 47  PINTIYPE---ESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTS-DRYSMVGGNLVINN 102

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   +
Sbjct: 103 PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 162

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARN----KLG 294
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +    K  
Sbjct: 163 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 222

Query: 295 TAQGSGSLTVKEHT------HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
            ++    + + E T       I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 223 FSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV--PDIRWRKVLE 280

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 281 PMPSTAE---ISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 328


>gi|158260111|dbj|BAF82233.1| unnamed protein product [Homo sapiens]
          Length = 627

 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 175/378 (46%), Gaps = 28/378 (7%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 241 PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 298

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 299 NIQLEDEGIYECEAENIRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 354

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 355 TGKPIPTIRWLKNGYAYHKG------ELRLYDVTFEN-----AGMYQCIAENTYGAIYAN 403

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 404 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 463

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 464 WEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENAT 523

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ VW      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 524 MQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 583

Query: 382 RAQTELDFIEAQATLTVQ 399
            AQT +D   A A L V+
Sbjct: 584 TAQTIVDNSSASADLVVR 601



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 154/378 (40%), Gaps = 34/378 (8%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 189 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVV 246

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  + A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 247 QFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 303

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N  G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 304 DEGIYECEAENIRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 362

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 363 RWLKN-----GYAY---HKGELRLYDVTFENAGMYQCIAENTYGAIYANAELKILALAPT 414

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   D SL 
Sbjct: 415 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 470

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC A+       +  TL +  P   + AP N  +    +A  +   S+
Sbjct: 471 INNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASF 530

Query: 424 NPVSPQSLRGHFRGYKVQ 441
           +P    +    F GY + 
Sbjct: 531 DPALDLTFVWSFNGYVID 548



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 140/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   ++  SDR S    G +L+I + +   D G Y C  S
Sbjct: 60  KVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 117

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 118 NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 171

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 172 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 228

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 229 LIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 288

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 289 STSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 348

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+       + E R      Y +T       ++G Y C A+ 
Sbjct: 349 YWPCVATGKPI--PTIRWLKNGYAYH-KGELRL-----YDVTFE-----NAGMYQCIAEN 395

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 396 TYGAIYANAELKI 408



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   +     +    VG N +   
Sbjct: 47  PINTIYPE---ESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTS-DRYSMVGGNLVINN 102

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+N+ G V          +        + E  V +GK +VL C   +
Sbjct: 103 PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 162

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 163 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 222

Query: 299 SGSLT----VKEHT------HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                    + E T       I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 223 FSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV--PDIRWRKVLE 280

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 281 PMPSTAE---ISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 328


>gi|241738313|ref|XP_002414064.1| cell adhesion molecule, putative [Ixodes scapularis]
 gi|215507918|gb|EEC17372.1| cell adhesion molecule, putative [Ixodes scapularis]
          Length = 1073

 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 150/585 (25%), Positives = 235/585 (40%), Gaps = 33/585 (5%)

Query: 37  YVTRKKEVA-LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVE 95
           +V R   V  +      + C   G P+    W KD   + PS R+   + G SL I HV 
Sbjct: 292 FVHRMDNVTHVSGSDARMQCAASGYPITLISWKKDNEGLRPSSRLVSSDNG-SLHIVHVS 350

Query: 96  FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA-SGLPE 154
            SDQG Y C VSN  G     S+ L V+A P         N  E    T  C   SG P 
Sbjct: 351 QSDQGWYECAVSNKKGNTAVGSMFLRVIAKPVINPFLFMKNLQEGMRTTVVCSVLSGEPP 410

Query: 155 PEIHWVHNGKPISQAPPNPR-RKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY 211
            EI W+ +  P+S+  P  +  ++G   + +T++N+ +  +GNY C AT+ +        
Sbjct: 411 VEIDWLKDSAPLSEVHPEAKITRLGDFASSLTMDNVTRRHSGNYSCKATSGIATTNYTSR 470

Query: 212 VNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK------ELTGGRYT 265
           ++V A +P   + P D+ +  G+  V  C   G P P   W  N+K       ++     
Sbjct: 471 MDVSA-SPRWMKQPSDQSSTRGQRTVFDCEADGNPLPVHRWKKNEKLSEFRSVVSSPHMH 529

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGS-LTVKEHTHITDQPEDYEVEAGQS 324
           +LE G L I +V   D G Y C A N +G A    + L V    +  ++ E   V + + 
Sbjct: 530 VLENGSLVIVEVTPKDQGHYLCEASNGVGPALSVAAYLQVNVPPYFHEEFETKTVRSKED 589

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS-------LTVTKSSELDSG 377
            T  C    +    L++ W +   P    + PRFV   D +       + +      DSG
Sbjct: 590 VTISCEVFGE--TPLTVAWSKDRRPFGDLALPRFVLQEDTTAEGIVSKVFIPSVGREDSG 647

Query: 378 QYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRG 437
            + C A       +    L VQ P + P +  + QV  ++ A + W    P +      G
Sbjct: 648 VFVCEATNSFGKKDRTIQLIVQGPPDIPRDIHVDQVT-SRSATLFWT--QPHTGNSPLLG 704

Query: 438 YKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
           Y V    E D   S    +          V   VP +    RV+A N      PS+ I  
Sbjct: 705 YTVLYVPEADKVTSAPSSLRTGTSENRATVPGLVPGTAYILRVVAENAVGKSGPSDEIRV 764

Query: 498 VTPEGVP-GTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPL-- 552
           VT E  P G+   +      S   +++W  P Q   +G L G+ + Y+ +   +      
Sbjct: 765 VTEEEAPSGSPYEIRITATSSKTVHVRWKSPLQSTYHGKLKGFHVGYRQLNSRETFQFQT 824

Query: 553 --LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK 595
             +E      +P     ++ GL   T+Y + +  +   G G  S+
Sbjct: 825 VNVEDDEAKKEPKDNEFEIRGLRRFTQYAVVVQAFNNKGAGPLSE 869



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 147/349 (42%), Gaps = 31/349 (8%)

Query: 51  VELFCIFGGTPLPQTIW-SKDGVPINPSDRISQGNYGKS------LIIKHVEFSDQGSYT 103
           + L C+  G P P   W  KD   + P   ++ G  G+       L+I+     D G+Y 
Sbjct: 24  LRLACVAQGYPAPSYRWFRKDDSLVLP---VATGGGGRVRVFRGFLLIQSTVRQDAGTYV 80

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C  +N  GE ++   ++ V  +   +V P  +   E +TV F C   G P   + W+ N 
Sbjct: 81  CAANNSAGEDRT-QFEVVVTMSLKVSVSPGTVLTQEGKTVVFNCSVRGFPVSSVSWMKNQ 139

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + +   P N  R VG   + I  ++++D G Y C A            + +  + P+  E
Sbjct: 140 QLL--VPSNRVRAVGQTVLHISGVQRADRGMYQCVAHGHDSSAQGAAQLVLEENPPDFLE 197

Query: 224 APKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD-----------L 272
              D+    G  V L C V G P P+++W    + L+    + L  GD           +
Sbjct: 198 TFPDQLLKPGSAVSLKCSVTGNPLPQISWFRYGRLLSD--RSGLRIGDFVDASGVVTSFV 255

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV 332
            ++ +A    G Y+C A N+L + + +  L+V     +        V +G  A  +C A 
Sbjct: 256 NVSSLATEHGGVYSCRAENELASVEHTARLSVYGPPFVHRMDNVTHV-SGSDARMQCAAS 314

Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTC 381
             P   +S  W + +E +   S  R V S++ SL +   S+ D G Y C
Sbjct: 315 GYPITLIS--WKKDNEGLRPSS--RLVSSDNGSLHIVHVSQSDQGWYEC 359



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 142/332 (42%), Gaps = 19/332 (5%)

Query: 145 FECKASGLPEPEIHWVHNGK----PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
             C A G P P   W         P++      R +V    + I++  + D G Y C A 
Sbjct: 26  LACVAQGYPAPSYRWFRKDDSLVLPVATGGGG-RVRVFRGFLLIQSTVRQDAGTYVCAAN 84

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT 260
           NS G       V V+  + +++ +P    T +GKTVV  C V G P   V+W+ NQ+ L 
Sbjct: 85  NSAGEDRTQFEV-VVTMSLKVSVSPGTVLTQEGKTVVFNCSVRGFPVSSVSWMKNQQLLV 143

Query: 261 -GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEH-THITDQPEDYE 318
              R   +    L I+ V  AD G Y C A     +AQG+  L ++E+     +   D  
Sbjct: 144 PSNRVRAVGQTVLHISGVQRADRGMYQCVAHGHDSSAQGAAQLVLEENPPDFLETFPDQL 203

Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS-- 376
           ++ G + + +C+   +P  ++S  W R    +   S  R     D S  VT    + S  
Sbjct: 204 LKPGSAVSLKCSVTGNPLPQIS--WFRYGRLLSDRSGLRIGDFVDASGVVTSFVNVSSLA 261

Query: 377 ----GQYTCRAQTELDFIEAQATLTVQVP--LEAPSNFTLIQVIDAK-KAVVSWNPVSPQ 429
               G Y+CRA+ EL  +E  A L+V  P  +    N T +   DA+ +   S  P++  
Sbjct: 262 TEHGGVYSCRAENELASVEHTARLSVYGPPFVHRMDNVTHVSGSDARMQCAASGYPITLI 321

Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGE 461
           S +    G +  +       GS+  + V++ +
Sbjct: 322 SWKKDNEGLRPSSRLVSSDNGSLHIVHVSQSD 353



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 135/593 (22%), Positives = 237/593 (39%), Gaps = 68/593 (11%)

Query: 50  KVELFC-IFGGTPLPQTIWSKDGVP---INPSDRISQ-GNYGKSLIIKHVEFSDQGSYTC 104
           +  + C +  G P  +  W KD  P   ++P  +I++ G++  SL + +V     G+Y+C
Sbjct: 397 RTTVVCSVLSGEPPVEIDWLKDSAPLSEVHPEAKITRLGDFASSLTMDNVTRRHSGNYSC 456

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           + ++G+    +Y+  + V A+P +  +P   ++   +   F+C+A G P P   W  N K
Sbjct: 457 KATSGIA-TTNYTSRMDVSASPRWMKQPSDQSSTRGQRTVFDCEADGNPLPVHRWKKNEK 515

Query: 165 --PISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLG---YVYKDVYVNVLAHA 218
                    +P   V  N  + I  +   D G+Y C A+N +G    V   + VNV    
Sbjct: 516 LSEFRSVVSSPHMHVLENGSLVIVEVTPKDQGHYLCEASNGVGPALSVAAYLQVNV---P 572

Query: 219 PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK---ELTGGRYTILE------- 268
           P   E  + +     + V ++C VFG     V W  +++   +L   R+ + E       
Sbjct: 573 PYFHEEFETKTVRSKEDVTISCEVFGETPLTVAWSKDRRPFGDLALPRFVLQEDTTAEGI 632

Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE--AGQSAT 326
              + I  V   DSG + C A N  G    +  L V+    I   P D  V+    +SAT
Sbjct: 633 VSKVFIPSVGREDSGVFVCEATNSFGKKDRTIQLIVQGPPDI---PRDIHVDQVTSRSAT 689

Query: 327 F---RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
               + +  + P L  +++++  ++ +   S P  +++       T    +    Y  R 
Sbjct: 690 LFWTQPHTGNSPLLGYTVLYVPEADKV--TSAPSSLRTGTSENRATVPGLVPGTAYILRV 747

Query: 384 QTELDFIEAQATLTVQVPLE--APSNF---TLIQVIDAKKAVVSWNPVSPQSLRGHFRGY 438
             E    ++  +  ++V  E  APS       I    +K   V W      +  G  +G+
Sbjct: 748 VAENAVGKSGPSDEIRVVTEEEAPSGSPYEIRITATSSKTVHVRWKSPLQSTYHGKLKGF 807

Query: 439 KVQTWTEKDGEGSIRELIVN------KGESTTTEVDKFVPASKNFAR----VLAFNGAYN 488
            V  + + +   + +   VN      K E    E +  +   + F +    V AFN    
Sbjct: 808 HVG-YRQLNSRETFQFQTVNVEDDEAKKEPKDNEFE--IRGLRRFTQYAVVVQAFNNKGA 864

Query: 489 GPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKG-- 546
           GP SE  +  T E  P +   L      SS   L+W  PE     + GY + Y+S  G  
Sbjct: 865 GPLSEEATVQTLEFDPPSAPQLMITSKSSSTLELEWKFPEVTETPITGYVVHYKSEYGEW 924

Query: 547 --TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL 597
             T+V   L +             L  L    +Y++ +  +  AG G  S+ +
Sbjct: 925 QETQVNSKLHK-----------HLLTNLICGNRYQVTITAFNAAGRGVPSELV 966



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 151/357 (42%), Gaps = 37/357 (10%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLI-IKHVEFSDQGSYTCEVS 107
           K V   C   G P+    W K+   + PS+R+     G++++ I  V+ +D+G Y C V+
Sbjct: 117 KTVVFNCSVRGFPVSSVSWMKNQQLLVPSNRVRA--VGQTVLHISGVQRADRGMYQC-VA 173

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEE------TVTFECKASGLPEPEIHWVH 161
           +G   +   +  L +   P     P+F+    ++       V+ +C  +G P P+I W  
Sbjct: 174 HGHDSSAQGAAQLVLEENP-----PDFLETFPDQLLKPGSAVSLKCSVTGNPLPQISWFR 228

Query: 162 NGKPISQAPPNPRRKVG---------PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYV 212
            G+ +S        ++G          + + + +L     G Y C A N L  V     +
Sbjct: 229 YGRLLSD---RSGLRIGDFVDASGVVTSFVNVSSLATEHGGVYSCRAENELASVEHTARL 285

Query: 213 NVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGD 271
           +V  + P       +   V G    + C   G P   ++W  + + L    R    + G 
Sbjct: 286 SV--YGPPFVHRMDNVTHVSGSDARMQCAASGYPITLISWKKDNEGLRPSSRLVSSDNGS 343

Query: 272 LKITDVAFADSGEYTCFARNKLG-TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN 330
           L I  V+ +D G Y C   NK G TA GS  L V     I        ++ G   T  C+
Sbjct: 344 LHIVHVSQSDQGWYECAVSNKKGNTAVGSMFLRVIAKPVINPFLFMKNLQEGMRTTVVCS 403

Query: 331 AVS-DPSLKLSIVWLRGSEPI-DFESEPRFVQSNDY--SLTVTKSSELDSGQYTCRA 383
            +S +P +++   WL+ S P+ +   E +  +  D+  SLT+   +   SG Y+C+A
Sbjct: 404 VLSGEPPVEID--WLKDSAPLSEVHPEAKITRLGDFASSLTMDNVTRRHSGNYSCKA 458


>gi|403294842|ref|XP_003938372.1| PREDICTED: contactin-2 [Saimiri boliviensis boliviensis]
          Length = 1040

 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 166/623 (26%), Positives = 264/623 (42%), Gaps = 45/623 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWATAE----PTLQIPSVSFEDEGTYEC 306

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           E  N  G   +    + V A P +        A     + + C A+G P P + W+ NG+
Sbjct: 307 EAENTKGR-DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGE 365

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           P++      R +V    +    L   D+G Y C A N  G +Y    + V A AP+    
Sbjct: 366 PLAS---QNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLN 422

Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           P         G  +V+ C+   APK  V W    + L    R T+   G L I +++ +D
Sbjct: 423 PVRRLIPAARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLVIRNISRSD 482

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP++ L+ 
Sbjct: 483 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGDNLTLQCHASHDPTMDLTF 542

Query: 342 VWLRGSEPIDFES-----EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W     PIDF+          V+     LT+  +     G+Y C AQT +D    +AT+
Sbjct: 543 TWTLDDFPIDFDKPGGHYRRTSVKETIGDLTILNAQLRHGGKYACMAQTVVDSASKEATV 602

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GSIR 453
            V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G+   +R
Sbjct: 603 LVRGPPGPPGGVVVRDIGDTTIQ-LSWS----RGFDNHSPIAKYILQARTPPAGKWKQVR 657

Query: 454 ELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGVPGTVQ 508
               N +G + T +V    P      RV+A N    G  +GP S+I    T E VP    
Sbjct: 658 TNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKI---RTKEAVPSVAP 714

Query: 509 SLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565
           S  +   G+     + W  +  E  NG   GY + ++    T       R+P  +D    
Sbjct: 715 SGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQ--TARVPG-ADAQYF 771

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGSTPNNLVI 620
                 + P   + + +  Y + GDG ES   L Y     P   P  V  +  + + + +
Sbjct: 772 VYSNESVRPYMPFEVKIRSYNRRGDGPESLTALVYSAEEEPKVAPTKVWAKAVSSSEMNV 831

Query: 621 SWTAMPEIEHNAPHFKYRI-FWR 642
           +W  + + + N     Y I +WR
Sbjct: 832 TWEPVQQ-DMNGILLGYEIRYWR 853



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 148/374 (39%), Gaps = 38/374 (10%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           ++V L C    +P     W  +G  + + P  R  Q   G  +I+   +  D G Y C  
Sbjct: 55  EQVLLACRARASPPATYRWKMNGTEMKLEPGSR-HQLVGGNLVIMNPTKAQDAGVYQCLA 113

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIH------- 158
           SN VG   S    L       F    EF     +   T E     LP  P  H       
Sbjct: 114 SNPVGTVVSREAVLR------FGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYR 167

Query: 159 WVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY----- 211
           W+ N  P +  P + R  V      + I     SD GNY C AT+ + +  K V+     
Sbjct: 168 WLLNEFP-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQ 226

Query: 212 VNVLAH-----APEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           +N+ A      AP I    P + Y + G+ V L C  FG P P + W      L+    T
Sbjct: 227 LNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWAT 286

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
              T  L+I  V+F D G Y C A N  G     G + V+          D E + G + 
Sbjct: 287 AEPT--LQIPSVSFEDEGTYECEAENTKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNL 344

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P  + ++ WLR  EP+  ++    +  +   L  +K S  DSG Y C A+ 
Sbjct: 345 RWGCAAAGKP--RPTVRWLRNGEPLASQNRVEVLAGD---LRFSKLSLEDSGMYQCVAEN 399

Query: 386 ELDFIEAQATLTVQ 399
           +   I A A L VQ
Sbjct: 400 KHGTIYASAELAVQ 413



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 142/656 (21%), Positives = 230/656 (35%), Gaps = 79/656 (12%)

Query: 88  SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
           +L I     SD G+Y+C      + S     +K   ++L+     L AP      P    
Sbjct: 191 NLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDTRLFAPSIKARFPAETY 250

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + VT EC A G P P I W      +S     P+       + I ++   D G Y 
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-----PQWATAEPTLQIPSVSFEDEGTYE 305

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A N+ G       + V A  PE  +   D     G  +   C   G P+P V W+ N 
Sbjct: 306 CEAENTKGRDTVQGRIIVQAQ-PEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNG 364

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
           + L       +  GDL+ + ++  DSG Y C A NK GT   S  L V+         P 
Sbjct: 365 EPLASQNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPV 424

Query: 316 DYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
              + A  G      C   + P  K  ++W +G+E +   S  R   + D +L +   S 
Sbjct: 425 RRLIPAARGGEIVIPCQPRAAP--KAVVLWSKGTEILVNSS--RVTVTPDGTLVIRNISR 480

Query: 374 LD-----------------SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDA 416
            D                 +G  + R  T++    + A + V   L    + +    +D 
Sbjct: 481 SDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGDNLTLQCHASHDPTMDL 540

Query: 417 KKAVVSWN----PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
                +W     P+      GH+R   V+   E  G+ +I    +  G          V 
Sbjct: 541 ---TFTWTLDDFPIDFDKPGGHYRRTSVK---ETIGDLTILNAQLRHGGKYACMAQTVVD 594

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
           ++   A VL                            +    +G +   L W +    + 
Sbjct: 595 SASKEATVLVRGPPG------------------PPGGVVVRDIGDTTIQLSWSRGFDNHS 636

Query: 533 VLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 592
            +  Y ++ ++    K   +    P   +    +A++ GL P   Y   +      G G 
Sbjct: 637 PIAKYILQARTPPAGKWKQVRTN-PANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGE 695

Query: 593 ES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
            S      +    VP   P  + G G  P  L+++WT M     N   F Y + +RR  +
Sbjct: 696 PSGPSSKIRTKEAVPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGS 755

Query: 647 GEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
              W    V        V +N+    + P+E+K+       DG  S+  L+ +  E
Sbjct: 756 TH-WQTARVPGADAQYFVYSNESVRPYMPFEVKIRSYNRRGDGPESLTALVYSAEE 810



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 114/298 (38%), Gaps = 34/298 (11%)

Query: 126 PYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
           P F  +P    F   + EE V   C+A   P     W  NG  +   P +  + VG N +
Sbjct: 37  PVFEDQPLSVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNLV 96

Query: 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTCR 241
            +   +  D G Y C A+N +G V     V       E ++  +D   T +G  V+L C 
Sbjct: 97  IMNPTKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCN 156

Query: 242 VFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGTA 296
                P     W+ N+      T GR+ + + TG+L I     +D G Y+C A + +  +
Sbjct: 157 PPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFS 216

Query: 297 QGSGSLTVKEHTHITDQPEDYEVEA---------------GQSATFRCNAVSDPSLKLSI 341
             S      +   +    ED  + A               GQ  T  C A  +P  +  I
Sbjct: 217 TKS---VFSKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPR--I 271

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            W +    +D    P++  + + +L +   S  D G Y C A+        Q  + VQ
Sbjct: 272 KWRK----VDGSLSPQWATA-EPTLQIPSVSFEDEGTYECEAENTKGRDTVQGRIIVQ 324



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 88/213 (41%), Gaps = 27/213 (12%)

Query: 420 VVSWNPVSPQSLRGHFRGYKVQ-------TWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
           +V+W P+S +   G   GY +         W      G+  +  V   ES    V  ++P
Sbjct: 728 IVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPGADAQYFVYSNES----VRPYMP 783

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP- 530
                 ++ ++N   +GP S      + E  P    + + A  + SS   + W   +Q  
Sbjct: 784 FE---VKIRSYNRRGDGPESLTALVYSAEEEPKVAPTKVWAKAVSSSEMNVTWEPVQQDM 840

Query: 531 NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGD 590
           NG+L+GY+I+Y      +      R   +     TSA+++GL P+TKY + +  Y +AG 
Sbjct: 841 NGILLGYEIRYWRAGDKEAAADRVRTAGLD----TSARVSGLHPNTKYHVTVRAYNRAGT 896

Query: 591 GAESKYLFYVPFKNPDNVEGRGSTPNNLVISWT 623
           G  S        K P         P N  ISWT
Sbjct: 897 GPASPSANATTMKPPPR-----RPPGN--ISWT 922


>gi|432940975|ref|XP_004082767.1| PREDICTED: LOW QUALITY PROTEIN: peroxidasin-like [Oryzias latipes]
          Length = 1501

 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 186/391 (47%), Gaps = 18/391 (4%)

Query: 20  IATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSD- 78
           +AT  +   N   P+     +  +V L N  V   C   G P PQ IW ++   +N  D 
Sbjct: 249 VATLTAEELNCELPRITSEPQDVDVTLGNT-VYFTCRAEGNPKPQIIWLRNNNALNMRDD 307

Query: 79  -RISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPY---FTVEPEF 134
            R++    G +L+I+    +DQG Y C   N  GE K+  + L    AP    F ++P+ 
Sbjct: 308 SRLNLLEDG-TLMIQDTRETDQGVYQCMAKNVAGEVKTSQVTLRYFGAPTRPSFVIQPQN 366

Query: 135 INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTG 193
                 E+VT EC A+G P+P + W    +  +  P +PR  +  +  + I+N++++D G
Sbjct: 367 TEVLVGESVTLECSATGQPQPRVSWTKGDR--TPLPNDPRITITTSGGLYIQNVQQADGG 424

Query: 194 NYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWI 253
            Y C A+N++  ++   ++ V A  P+ T  P+D+  ++  TV   C   G P P + W 
Sbjct: 425 QYTCFASNNVDTIHATAFIIVQA-TPQFTVTPQDQTVLESHTVEFPCEASGYPPPVIAWT 483

Query: 254 HNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--I 310
                L    R+ +L +G L+IT VA  D G+Y C A + +GT   S  L V++      
Sbjct: 484 RGGSALPLDRRHVVLSSGMLRITRVAAHDEGQYECQAVSPVGTVHASVQLRVEQRVTPVF 543

Query: 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTK 370
           T+ P D  VE+GQ     C A   P   L+  W++  + +      +F  S +  L V  
Sbjct: 544 TNAPRDLTVESGQDVQIPCRAQGQPPPVLT--WIK--DGVQVTESGKFHISPEGFLEVRD 599

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
           +   D+G+Y C A+  + +  A   LTV VP
Sbjct: 600 AGTADAGRYECTARNPIGYQVAGMVLTVTVP 630


>gi|355757812|gb|EHH61337.1| hypothetical protein EGM_19332 [Macaca fascicularis]
          Length = 334

 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 145/303 (47%), Gaps = 5/303 (1%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L +  V   D G Y 
Sbjct: 19  VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLKVGEEDDGEYR 77

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 78  CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 136

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N + SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 137 IPMEELAKDQKYRIQRGALILSNAQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 196

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 197 ADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 256

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 257 DTGRYFCLAANDQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPS 316

Query: 341 IVW 343
           I W
Sbjct: 317 ITW 319


>gi|355705277|gb|EHH31202.1| hypothetical protein EGK_21088 [Macaca mulatta]
          Length = 334

 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 145/303 (47%), Gaps = 5/303 (1%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           VAL+ + + L CI  G P P   W +   P+ P+DR++  N+ K+L +  V   D G Y 
Sbjct: 19  VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLKVGEEDDGEYR 77

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G A+ ++  ++V AAPY+  +P+       ET   +C+  G P+PE+ W  NG
Sbjct: 78  CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 136

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+ +   + + ++    + + N + SDT    C A N  G +  + Y+ V+    +I  
Sbjct: 137 IPMEELAKDQKYRIQRGALILSNAQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 196

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
           A    Y  V G T  L C+ FGAP P V W+       L   R+     G L I D+   
Sbjct: 197 ADNQTYVAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 256

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G Y C A N         +L VK+ T IT  P     + G   TF C A  DPSL+ S
Sbjct: 257 DTGRYFCLAANDQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPS 316

Query: 341 IVW 343
           I W
Sbjct: 317 ITW 319


>gi|334322026|ref|XP_001371582.2| PREDICTED: contactin-2-like [Monodelphis domestica]
          Length = 1205

 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 188/718 (26%), Positives = 299/718 (41%), Gaps = 98/718 (13%)

Query: 45   ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
            AL  ++V L C   G P+P+  W K    + P    ++     +L I  + F D+G+Y C
Sbjct: 415  ALVGQQVTLECFAFGNPVPRIKWRKMDDSLPPQWATAE----PTLQIPSISFEDEGTYEC 470

Query: 105  EVSNGVGE--AKSYSIDLSVLAAPYFTVEPEFINAAEEE---TVTFECKASGLPEPEIHW 159
            E  N  G   AK   I   V A P +    + I+ +E +    + + C A+G P P + W
Sbjct: 471  EAENIKGRDIAKGRII---VQAKPEWL---KVISDSEADIGSNLHWGCAAAGKPRPIVRW 524

Query: 160  VHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
            + NG P+       R ++    +    L   D+G Y C A N  G +Y    + V A AP
Sbjct: 525  LRNGDPLLS---QNRVEISGGDLKFSKLVLEDSGMYQCVAENKHGTIYASAELAVQAFAP 581

Query: 220  EITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITD 276
            +    P         G  V++ C+   APK  V W    + L    R TI   G L + +
Sbjct: 582  DFRLNPVKRLIPAARGGEVIIPCQPRSAPKSIVLWSKGTEILVNSSRVTITPDGTLILRN 641

Query: 277  VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
            ++ +D G+YTCFA N +G A  +G L+V++ T IT  P   ++  G++ T +C+A  DP+
Sbjct: 642  ISRSDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGENLTLQCHASHDPT 701

Query: 337  LKLSIVWLRGSEPIDFESEPRFVQSNDY-----SLTVTKSSELDSGQYTCRAQTELDFIE 391
            + L+  W     PIDF+      +  +       LT+  +     G+YTC AQT +D   
Sbjct: 702  MDLTFTWSLDGFPIDFDKSGGHYRRANLKETIGDLTILNAQLRHGGKYTCMAQTVVDSTS 761

Query: 392  AQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE 449
              ATL V+ P   P    +   I      ++W+    +    H     Y +Q  +  DG+
Sbjct: 762  ETATLLVRGPPGPPGGVVVRD-ISNTTVQLTWS----RGFDNHSPIAKYILQARSLPDGK 816

Query: 450  -GSIRELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGV 503
               +R    N +G + T +V    P      RVLA N    G  +GP S+I    T E  
Sbjct: 817  WKQVRTNPANIEGNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSKI---RTKESA 873

Query: 504  PGTVQSLEAIPLGSSA-FYLKWVKP---EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
            P    S  +   G+     + W KP   E  NG   GY + ++    +      +R    
Sbjct: 874  PTIAPSGLSGGGGAPGELIINW-KPMLREYQNGEGFGYILSFRRQGSSD----WQRAKVS 928

Query: 560  -SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGS 613
             +D      +   + P T + + + GY + G+G ES   L Y     P   P  V+ +G+
Sbjct: 929  QADALHFVYRNESVRPYTPFEVKIRGYNRQGEGPESLTTLVYSAEEEPRVAPAKVKAKGT 988

Query: 614  TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
              + + + W                         E  +QDD+     + ++L        
Sbjct: 989  LSSEMNVMW-------------------------EPVHQDDM-----NGILLG------- 1011

Query: 674  YEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
            YEI+    W + D E +  + +   G  T+ +V    P +K    V A+N A  GP S
Sbjct: 1012 YEIRY---WKDGDKEAAA-DRVRTAGLDTSAQVTGLQPNTKYHVTVRAYNRAGTGPAS 1065



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 149/376 (39%), Gaps = 42/376 (11%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPI----NPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           +K+ L C    +P     W  +G  +    +P  ++  GN    +I+   +  D G Y C
Sbjct: 219 EKIALACRARASPPATYRWKMNGTEMKLEQDPHYQLVGGNL---VIMNPTKAKDAGVYQC 275

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIH----- 158
             SN VG   S    L       F    EF     +   T E     LP  P  H     
Sbjct: 276 LASNPVGTVVSREAVLR------FGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLS 329

Query: 159 --WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVY--- 211
             W+ N  P +  P + R  V      + I     SD GNY C AT+ + ++ K V+   
Sbjct: 330 YRWLLNEFP-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFITKSVFSKF 388

Query: 212 --VNVLAH----APEITEA--PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGR 263
             +N+ A     +P   +A  P + Y + G+ V L C  FG P P + W      L    
Sbjct: 389 AQLNLAAEDSRPSPPSIKARFPLETYALVGQQVTLECFAFGNPVPRIKWRKMDDSLPPQW 448

Query: 264 YTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQ 323
            T   T  L+I  ++F D G Y C A N  G     G + V+          D E + G 
Sbjct: 449 ATAEPT--LQIPSISFEDEGTYECEAENIKGRDIAKGRIIVQAKPEWLKVISDSEADIGS 506

Query: 324 SATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           +  + C A   P  +  + WLR  +P+  ++    V+ +   L  +K    DSG Y C A
Sbjct: 507 NLHWGCAAAGKP--RPIVRWLRNGDPLLSQNR---VEISGGDLKFSKLVLEDSGMYQCVA 561

Query: 384 QTELDFIEAQATLTVQ 399
           + +   I A A L VQ
Sbjct: 562 ENKHGTIYASAELAVQ 577



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 107/281 (38%), Gaps = 30/281 (10%)

Query: 126 PYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
           P F  +P    F   + EE +   C+A   P     W  NG  +        + VG N +
Sbjct: 201 PIFEDQPVSSLFPEESSEEKIALACRARASPPATYRWKMNGTEMKLEQDPHYQLVGGNLV 260

Query: 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTCR 241
            +   +  D G Y C A+N +G V     V       E ++  +D   T +G  V+L C 
Sbjct: 261 IMNPTKAKDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCN 320

Query: 242 VFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGTA 296
                P     W+ N+      T GR+ + + TG+L I     +D G Y+C A + +   
Sbjct: 321 PPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFI 380

Query: 297 QGS-----GSLTVKEHTHITDQP--------EDYEVEAGQSATFRCNAVSDPSLKLSIVW 343
             S       L +         P        E Y +  GQ  T  C A  +P  +  I W
Sbjct: 381 TKSVFSKFAQLNLAAEDSRPSPPSIKARFPLETYAL-VGQQVTLECFAFGNPVPR--IKW 437

Query: 344 LRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
            +    +D    P++  + + +L +   S  D G Y C A+
Sbjct: 438 RK----MDDSLPPQWATA-EPTLQIPSISFEDEGTYECEAE 473



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 11/129 (8%)

Query: 421  VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
            V W PV    + G   GY+++ W + D E +  + +   G  T+ +V    P +K    V
Sbjct: 995  VMWEPVHQDDMNGILLGYEIRYWKDGDKEAAA-DRVRTAGLDTSAQVTGLQPNTKYHVTV 1053

Query: 481  LAFNGAYNGPPSEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVL 534
             A+N A  GP S   +  T    P   PG +    +  L SS+  +KW  V P++    +
Sbjct: 1054 RAYNRAGTGPASPSTNATTMKPPPNRPPGNI----SWTLASSSLIIKWDPVIPQRNESAV 1109

Query: 535  MGYKIKYQS 543
             GYK+ Y++
Sbjct: 1110 TGYKMLYRN 1118



 Score = 44.3 bits (103), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 13/109 (11%)

Query: 517  SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
            SS   + W  V  +  NG+L+GY+I+Y      +      R   +     TSA++ GL+P
Sbjct: 990  SSEMNVMWEPVHQDDMNGILLGYEIRYWKDGDKEAAADRVRTAGLD----TSAQVTGLQP 1045

Query: 575  STKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWT 623
            +TKY + +  Y +AG G  S        K P N       P N  ISWT
Sbjct: 1046 NTKYHVTVRAYNRAGTGPASPSTNATTMKPPPN-----RPPGN--ISWT 1087


>gi|187956549|gb|AAI50790.1| Peroxidasin homolog (Drosophila) [Mus musculus]
          Length = 1475

 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 179/360 (49%), Gaps = 17/360 (4%)

Query: 51  VELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           V   C   G P P+ IW ++   + +    R++  + G +L+I++ + +D+G Y C   N
Sbjct: 260 VYFTCRAEGNPKPEIIWLRNNNELSMKTDSRLNLLDDG-TLMIQNTQEADEGVYQCMAKN 318

Query: 109 GVGEAKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             GEAK+  + L  L   A P F ++P+       E+VT EC A+G P P+I W    + 
Sbjct: 319 VAGEAKTQEVTLRYLGSPARPTFVIQPQNTEVLVGESVTLECSATGHPLPQITWTRGDR- 377

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            +  P +PR  + P+  + I+N+ +SD+G Y C A+NS+  ++   ++ V A  P+ T  
Sbjct: 378 -TPLPIDPRVNITPSGGLYIQNVAQSDSGEYTCFASNSVDSIHATAFIIVQA-LPQFTVT 435

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSG 283
           P+    ++G+TV   C   G P+P + W     +L+   R+ +L +G L+I+ VA  D G
Sbjct: 436 PQSRVVIEGQTVDFQCAAKGHPQPVIAWTKGGSQLSVDRRHLVLSSGTLRISGVALHDQG 495

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +Y C A N +G+ +    LTV+          P D  VE G +    C++  +P  + +I
Sbjct: 496 QYECQAVNIIGSQKVVAHLTVQPRVTPVFASIPSDMTVEVGTNVQLPCSSQGEP--EPAI 553

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            W    + +      +F  S +  LT+      D+G+Y C A+  + +      L+V VP
Sbjct: 554 TW--NKDGVQVTESGKFHISPEGFLTINDVGTADAGRYECVARNTIGYASVSMVLSVNVP 611



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/264 (34%), Positives = 121/264 (45%), Gaps = 11/264 (4%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDG---VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           L  + V L C   G PLPQ  W++     +PI+P   I+       L I++V  SD G Y
Sbjct: 351 LVGESVTLECSATGHPLPQITWTRGDRTPLPIDPRVNITPSG---GLYIQNVAQSDSGEY 407

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
           TC  SN V    + +  + V A P FTV P+     E +TV F+C A G P+P I W   
Sbjct: 408 TCFASNSVDSIHATAF-IIVQALPQFTVTPQSRVVIEGQTVDFQCAAKGHPQPVIAWTKG 466

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA-PEI 221
           G  +S    +     G  RI+   L   D G Y C A N +G      ++ V     P  
Sbjct: 467 GSQLSVDRRHLVLSSGTLRISGVALH--DQGQYECQAVNIIGSQKVVAHLTVQPRVTPVF 524

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
              P D     G  V L C   G P+P + W  +  ++T  G++ I   G L I DV  A
Sbjct: 525 ASIPSDMTVEVGTNVQLPCSSQGEPEPAITWNKDGVQVTESGKFHISPEGFLTINDVGTA 584

Query: 281 DSGEYTCFARNKLGTAQGSGSLTV 304
           D+G Y C ARN +G A  S  L+V
Sbjct: 585 DAGRYECVARNTIGYASVSMVLSV 608



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 137/308 (44%), Gaps = 11/308 (3%)

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAA--PYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           Q + TCE    +      +I    L    P  T EP+  +     TV F C+A G P+PE
Sbjct: 214 QAAATCEYPRRIQGRSVATITPEELNCERPRITSEPQDADVTSGNTVYFTCRAEGNPKPE 273

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV-YKDVYVNVL 215
           I W+ N   +S    +    +    + I+N +++D G Y C A N  G    ++V +  L
Sbjct: 274 IIWLRNNNELSMKTDSRLNLLDDGTLMIQNTQEADEGVYQCMAKNVAGEAKTQEVTLRYL 333

Query: 216 AH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGD 271
                P     P++   + G++V L C   G P P++ W    +       R  I  +G 
Sbjct: 334 GSPARPTFVIQPQNTEVLVGESVTLECSATGHPLPQITWTRGDRTPLPIDPRVNITPSGG 393

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
           L I +VA +DSGEYTCFA N + +   +  + V+     T  P+   V  GQ+  F+C A
Sbjct: 394 LYIQNVAQSDSGEYTCFASNSVDSIHATAFIIVQALPQFTVTPQSRVVIEGQTVDFQCAA 453

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
              P  +  I W +G   +  +     + S   +L ++  +  D GQY C+A   +   +
Sbjct: 454 KGHP--QPVIAWTKGGSQLSVDRRHLVLSSG--TLRISGVALHDQGQYECQAVNIIGSQK 509

Query: 392 AQATLTVQ 399
             A LTVQ
Sbjct: 510 VVAHLTVQ 517


>gi|268370173|ref|NP_852060.2| peroxidasin homolog precursor [Mus musculus]
 gi|341941778|sp|Q3UQ28.2|PXDN_MOUSE RecName: Full=Peroxidasin homolog; Flags: Precursor
          Length = 1475

 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 179/360 (49%), Gaps = 17/360 (4%)

Query: 51  VELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           V   C   G P P+ IW ++   + +    R++  + G +L+I++ + +D+G Y C   N
Sbjct: 260 VYFTCRAEGNPKPEIIWLRNNNELSMKTDSRLNLLDDG-TLMIQNTQEADEGVYQCMAKN 318

Query: 109 GVGEAKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             GEAK+  + L  L   A P F ++P+       E+VT EC A+G P P+I W    + 
Sbjct: 319 VAGEAKTQEVTLRYLGSPARPTFVIQPQNTEVLVGESVTLECSATGHPLPQITWTRGDR- 377

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            +  P +PR  + P+  + I+N+ +SD+G Y C A+NS+  ++   ++ V A  P+ T  
Sbjct: 378 -TPLPIDPRVNITPSGGLYIQNVAQSDSGEYTCFASNSVDSIHATAFIIVQA-LPQFTVT 435

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSG 283
           P+    ++G+TV   C   G P+P + W     +L+   R+ +L +G L+I+ VA  D G
Sbjct: 436 PQSRVVIEGQTVDFQCAAKGHPQPVIAWTKGGSQLSVDRRHLVLSSGTLRISGVALHDQG 495

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +Y C A N +G+ +    LTV+          P D  VE G +    C++  +P  + +I
Sbjct: 496 QYECQAVNIIGSQKVVAHLTVQPRVTPVFASIPSDMTVEVGTNVQLPCSSQGEP--EPAI 553

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            W    + +      +F  S +  LT+      D+G+Y C A+  + +      L+V VP
Sbjct: 554 TW--NKDGVQVTESGKFHISPEGFLTINDVGTADAGRYECVARNTIGYASVSMVLSVNVP 611



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/264 (34%), Positives = 121/264 (45%), Gaps = 11/264 (4%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDG---VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           L  + V L C   G PLPQ  W++     +PI+P   I+       L I++V  SD G Y
Sbjct: 351 LVGESVTLECSATGHPLPQITWTRGDRTPLPIDPRVNITPSG---GLYIQNVAQSDSGEY 407

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
           TC  SN V    + +  + V A P FTV P+     E +TV F+C A G P+P I W   
Sbjct: 408 TCFASNSVDSIHATAF-IIVQALPQFTVTPQSRVVIEGQTVDFQCAAKGHPQPVIAWTKG 466

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA-PEI 221
           G  +S    +     G  RI+   L   D G Y C A N +G      ++ V     P  
Sbjct: 467 GSQLSVDRRHLVLSSGTLRISGVALH--DQGQYECQAVNIIGSQKVVAHLTVQPRVTPVF 524

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
              P D     G  V L C   G P+P + W  +  ++T  G++ I   G L I DV  A
Sbjct: 525 ASIPSDMTVEVGTNVQLPCSSQGEPEPAITWNKDGVQVTESGKFHISPEGFLTINDVGTA 584

Query: 281 DSGEYTCFARNKLGTAQGSGSLTV 304
           D+G Y C ARN +G A  S  L+V
Sbjct: 585 DAGRYECVARNTIGYASVSMVLSV 608



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 137/308 (44%), Gaps = 11/308 (3%)

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAA--PYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           Q + TCE    +      +I    L    P  T EP+  +     TV F C+A G P+PE
Sbjct: 214 QAAATCEYPRRIQGRSVATITPEELNCERPRITSEPQDADVTSGNTVYFTCRAEGNPKPE 273

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV-YKDVYVNVL 215
           I W+ N   +S    +    +    + I+N +++D G Y C A N  G    ++V +  L
Sbjct: 274 IIWLRNNNELSMKTDSRLNLLDDGTLMIQNTQEADEGVYQCMAKNVAGEAKTQEVTLRYL 333

Query: 216 AH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGD 271
                P     P++   + G++V L C   G P P++ W    +       R  I  +G 
Sbjct: 334 GSPARPTFVIQPQNTEVLVGESVTLECSATGHPLPQITWTRGDRTPLPIDPRVNITPSGG 393

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
           L I +VA +DSGEYTCFA N + +   +  + V+     T  P+   V  GQ+  F+C A
Sbjct: 394 LYIQNVAQSDSGEYTCFASNSVDSIHATAFIIVQALPQFTVTPQSRVVIEGQTVDFQCAA 453

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
              P  +  I W +G   +  +     + S   +L ++  +  D GQY C+A   +   +
Sbjct: 454 KGHP--QPVIAWTKGGSQLSVDRRHLVLSSG--TLRISGVALHDQGQYECQAVNIIGSQK 509

Query: 392 AQATLTVQ 399
             A LTVQ
Sbjct: 510 VVAHLTVQ 517


>gi|301603953|ref|XP_002931630.1| PREDICTED: receptor-type tyrosine-protein phosphatase F-like
           [Xenopus (Silurana) tropicalis]
          Length = 1914

 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 178/706 (25%), Positives = 294/706 (41%), Gaps = 86/706 (12%)

Query: 19  VIATGISASQNRHAPKQQYVTRK--KEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINP 76
           V+   I+ +Q  + P      RK   ++ +        C     P P+  W K G  ++ 
Sbjct: 16  VLCCSITLTQADNEP---VFVRKPDDQIGISGGVASFVCQATADPKPRITWMKKGKKVS- 71

Query: 77  SDRISQGNY----GKSLIIKHVEF-SDQGSYTCEVSNGVGEAKSYSIDLSVL-------A 124
           S R     +    G  L I+ +    D+  Y C  +N VGE  S S  L+VL        
Sbjct: 72  SQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINS-SAKLTVLEEEQLPHG 130

Query: 125 APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPR-RKVGPNRIT 183
            P   + P+     +  T T  C ASG P+PEI W  +  P+  A  N R +++    + 
Sbjct: 131 FPVIDMGPQLKVVEKTRTATMLCAASGNPDPEITWFKDFLPVDTASSNGRIKQLRSGALQ 190

Query: 184 IENLRKSDTGNYGCNATNSLGYVYK---DVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC 240
           IEN  +SD G Y C ATNS G  Y    ++YV V   AP  +  P +   + G +V LTC
Sbjct: 191 IENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSIPPSNHEVMPGGSVNLTC 250

Query: 241 RVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSG 300
              GAP P V W+   +ELT      +    L++T++   +S  YTC A + LG  +   
Sbjct: 251 VAVGAPMPYVKWMAGLEELTKEDEMPVGRNVLELTNI--KESANYTCVAISSLGMIEAVA 308

Query: 301 SLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS-EPIDF---ESEP 356
            +TVK    +   P D  V    + +            +++ W  G+ +P+ +   + +P
Sbjct: 309 QITVKA---LPKPPLDGTVTETTATS------------VTLTWDSGNPDPVSYYVIQYKP 353

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ--------ATLTVQVPLEAPSNF 408
           +  +S+   +    ++    G  +  ++ E   I             +  Q   +APS+ 
Sbjct: 354 KASESSFQEVDGVATTRYSIGGLSPFSEYEFRIIAVNNIGRGPPSEVIEAQTGEQAPSSP 413

Query: 409 TL---IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSI--RELIVNKGEST 463
            L    +++ A   +V W+   P+   G  RG++V   T+     S+  +  +V+   +T
Sbjct: 414 PLKVQARMLSASTMLVQWD--LPEEPNGQIRGFRVYYTTDPHLPFSMWQKHNVVDNHLTT 471

Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLK 523
              +      S    RVLAF    +GPPSEII   T +GVP      +A     +   L 
Sbjct: 472 IGGLTTGTTYS---IRVLAFTSVGDGPPSEIIQVKTQQGVPAQPVDFQAEAETDTRILLT 528

Query: 524 WVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
           W+ P  P   +  Y++ Y        G   E+   +  PT++ A + GL+P T Y   LA
Sbjct: 529 WLLP--PQERITKYELLYWE------GTDGEQQKLMFHPTSSYA-VEGLKPDTLYHFRLA 579

Query: 584 GYTKAGDGA-----ESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
            ++  G G      +++     P   P +VE    +   + +SW A P    N    +Y 
Sbjct: 580 AWSDTGVGVYTPAIQARTAQSTPSAPPQDVECSSLSSTAIRVSWVAPPASSRNGALTRYS 639

Query: 639 IFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTE 684
           + +      +A   +D        +V +  P    +EIK ++ WTE
Sbjct: 640 LAY------QALAGEDT----SRHVVDSISPDISSWEIKDLEKWTE 675



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 135/653 (20%), Positives = 234/653 (35%), Gaps = 84/653 (12%)

Query: 25  SASQNRHAPKQQYVTRKKEVALR------------NKKVELFCIFGGTPLPQTIWSKDGV 72
           SA     AP   YV R + VA R               V L C+  G P+P   W     
Sbjct: 209 SAGTRYSAPANLYV-RVRRVAPRFSIPPSNHEVMPGGSVNLTCVAVGAPMPYVKWMAGLE 267

Query: 73  PINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP 132
            +   D +  G      +++     +  +YTC   + +G  ++ +  ++V A P    +P
Sbjct: 268 ELTKEDEMPVGRN----VLELTNIKESANYTCVAISSLGMIEAVA-QITVKALP----KP 318

Query: 133 EFINAAEEETVTFECKA--SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
                  E T T       SG P+P  ++V   KP +            +  + + +   
Sbjct: 319 PLDGTVTETTATSVTLTWDSGNPDPVSYYVIQYKPKA------------SESSFQEVDGV 366

Query: 191 DTGNYGCNATNSLG-YVYKDVYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPK 247
            T  Y     +    Y ++ + VN +   P  E+ EA   E       + +  R+  A  
Sbjct: 367 ATTRYSIGGLSPFSEYEFRIIAVNNIGRGPPSEVIEAQTGEQAPSSPPLKVQARMLSAST 426

Query: 248 PEVNWIHNQK---ELTGGR----------------YTILETGDLKITDVAFADSGEYTCF 288
             V W   ++   ++ G R                + +++     I  +    +      
Sbjct: 427 MLVQWDLPEEPNGQIRGFRVYYTTDPHLPFSMWQKHNVVDNHLTTIGGLTTGTTYSIRVL 486

Query: 289 ARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
           A   +G    S  + VK    +  QP D++ EA          +  P  +++   L   E
Sbjct: 487 AFTSVGDGPPSEIIQVKTQQGVPAQPVDFQAEAETDTRILLTWLLPPQERITKYELLYWE 546

Query: 349 PIDFESEP-RFVQSNDYSLTVTKSSELDSGQYTCRAQTELD-FIEAQATLTVQVPLEAPS 406
             D E +   F  ++ Y++   K   L   +    + T +  +  A    T Q    AP 
Sbjct: 547 GTDGEQQKLMFHPTSSYAVEGLKPDTLYHFRLAAWSDTGVGVYTPAIQARTAQSTPSAPP 606

Query: 407 NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTT- 465
                  + +    VSW      S  G    Y +  +    GE + R ++ +     ++ 
Sbjct: 607 QDVECSSLSSTAIRVSWVAPPASSRNGALTRYSL-AYQALAGEDTSRHVVDSISPDISSW 665

Query: 466 EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW 524
           E+      ++    V A      GP S  I   T E VP    + +E   + S++  + W
Sbjct: 666 EIKDLEKWTEYKVWVRAHTDVGAGPESSPIIVRTDEDVPSAPPRKVEVDSVNSTSVRVTW 725

Query: 525 VKP--EQPNGVLMGYKIKYQSVKG--TKVGPLLERLPYIS------DPTTTSAKLAGLEP 574
             P   + NG + GY++ Y  ++G   +  P+++ +          D     A + GL P
Sbjct: 726 KSPLPTKQNGQIRGYQVTYVRLEGGEPRGNPIIKDVMLSEAQWRPEDVGDYDAVITGLSP 785

Query: 575 STKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPN--NLVISWTAM 625
            T Y I +A YT  GDGA SK         P  V   G+ P    ++IS TA+
Sbjct: 786 ETTYSITVAAYTTKGDGARSK---------PKVVSTTGAVPGKPTMMISTTAL 829



 Score = 46.2 bits (108), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 75/329 (22%), Positives = 128/329 (38%), Gaps = 36/329 (10%)

Query: 404  APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGS----IRELIVNK 459
            AP     +  +++    V+W    P    G  RGY+V     + GE      I+++++++
Sbjct: 706  APPRKVEVDSVNSTSVRVTWKSPLPTKQNGQIRGYQVTYVRLEGGEPRGNPIIKDVMLSE 765

Query: 460  GESTTTEVDKF-------VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA 512
             +    +V  +        P +     V A+    +G  S+     T   VPG    + +
Sbjct: 766  AQWRPEDVGDYDAVITGLSPETTYSITVAAYTTKGDGARSKPKVVSTTGAVPGKPTMMIS 825

Query: 513  IPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYIS-DPTTTSAKLAG 571
                ++A  ++W  P +  G L+GY+++Y+ V         +R   I          + G
Sbjct: 826  TTALNTAL-IQWHPPREIVGELLGYRLQYKRVDE-------DRFITIDFSKNEHHHTVTG 877

Query: 572  LEPSTKYRIHLAGYTKAGDGAESKYLFYV----PFKNPDNVEGRGSTPNNLVISWTAMPE 627
            L     Y   L+   +AG G E +         P   P N++  G T +   +SW     
Sbjct: 878  LHKGASYIFKLSAKNRAGAGEEYEKEISTAEDFPSGFPQNLQVVGLTTSTTEVSWEPPVL 937

Query: 628  IEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDG 687
             E N     Y + +R  N+     QD     R + + L N      Y+IK V+  T K G
Sbjct: 938  SERNGKITNYTVVYRDINS----QQDLTNVTRDTHITLVNLKPDTTYDIK-VRARTNK-G 991

Query: 688  EGSIRELIVNKGESTTTEVDKFVPASKNF 716
             G +   I    +S T  VD+    +KNF
Sbjct: 992  AGPLSPSI----QSRTMPVDQVF--AKNF 1014


>gi|403269332|ref|XP_003926703.1| PREDICTED: contactin-1 isoform 3 [Saimiri boliviensis boliviensis]
 gi|403269334|ref|XP_003926704.1| PREDICTED: contactin-1 isoform 4 [Saimiri boliviensis boliviensis]
          Length = 627

 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 175/378 (46%), Gaps = 28/378 (7%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P    V  K   AL  + V L C   G P+P   W K   P+  +  IS    G  L I 
Sbjct: 241 PADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 298

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
           +++  D+G Y CE  N  G+ K +   + V A P +    E IN  E +    + + C A
Sbjct: 299 NIQLEDEGIYECEAENIRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 354

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           +G P P I W+ NG    +       ++    +T EN      G Y C A N+ G +Y +
Sbjct: 355 TGKPIPTIRWLKNGYAYHKG------ELRLYDVTFEN-----AGMYQCIAENTHGAIYAN 403

Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTI 266
             + +LA AP  E+    K      G  V++ C+   APKP+ +W    + L    R  I
Sbjct: 404 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 463

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            E G L+I ++   D G YTCFA N  G A  +G+L + + T I   P + ++  G++AT
Sbjct: 464 WEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENAT 523

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
            +C A  DP+L L+ VW      IDF  E       F+  ++  L +  +    +G+YTC
Sbjct: 524 MQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLRHAGRYTC 583

Query: 382 RAQTELDFIEAQATLTVQ 399
            AQT +D   A A L V+
Sbjct: 584 TAQTIVDNSSASADLVVR 601



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 154/378 (40%), Gaps = 34/378 (8%)

Query: 80  ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
           +SQ N   +L I +VE SD+G+Y+C VS+       +S  + ++  P  T +P       
Sbjct: 189 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVV 246

Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
           +F  I A   + VT EC A G P P+I W    +P+   P           + I N++  
Sbjct: 247 QFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 303

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N  G       + V A  PE  E   D     G  +   C   G P P +
Sbjct: 304 DEGIYECEAENIRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 362

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
            W+ N     G  Y     G+L++ DV F ++G Y C A N  G    +  L +      
Sbjct: 363 RWLKN-----GYAY---HKGELRLYDVTFENAGMYQCIAENTHGAIYANAELKILALAPT 414

Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P   ++ A  G      C   + P  K S  W +G+E +   S  R +   D SL 
Sbjct: 415 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 470

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
           +   +  D G YTC A+       +  TL +  P   + AP N  +    +A  +   S+
Sbjct: 471 INNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASF 530

Query: 424 NPVSPQSLRGHFRGYKVQ 441
           +P    +    F GY + 
Sbjct: 531 DPALDLTFVWSFNGYVID 548



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 140/373 (37%), Gaps = 48/373 (12%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
           KV L C    +P P   W  +   ++  SDR S    G +L+I + +   D G Y C  S
Sbjct: 60  KVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 117

Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
           N  G  +S    LS     P+   E   +   E + +   C      +P  H        
Sbjct: 118 NSYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 171

Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
           W+ N  P+     + RR V      + I N+  SD GNY C  ++    + K V+     
Sbjct: 172 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 228

Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           L   PE T  P         KD Y + G+ V L C   G P P++ W    + +      
Sbjct: 229 LIPIPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 288

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
                 LKI ++   D G Y C A N  G  +    + V+      +   D EV+ G   
Sbjct: 289 STSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 348

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P    +I WL+       + E R      Y +T       ++G Y C A+ 
Sbjct: 349 YWPCVATGKPI--PTIRWLKNGYAYH-KGELRL-----YDVTFE-----NAGMYQCIAEN 395

Query: 386 ELDFIEAQATLTV 398
               I A A L +
Sbjct: 396 THGAIYANAELKI 408



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T+ PE    + E  V+  C+A   P P   W  N   +     +    VG N +   
Sbjct: 47  PINTIYPE---ESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTS-DRYSMVGGNLVINN 102

Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
             ++ D G Y C A+NS G V          +        + E  V +GK +VL C   +
Sbjct: 103 PDKQKDAGIYYCLASNSYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 162

Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
             P      W+ N+      +   R+     G+L I +V  +D G Y+CF  +   T   
Sbjct: 163 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 222

Query: 299 SGSLT----VKEHT------HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
                    + E T       I  Q +D     GQ+ T  C A+ +P     I W +  E
Sbjct: 223 FSKFIPLIPIPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPV--PDIRWRKVLE 280

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           P+   +E   + ++   L +      D G Y C A+      + QA + VQ
Sbjct: 281 PMPSTAE---ISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 328


>gi|148666973|gb|EDK99389.1| cell adhesion molecule with homology to L1CAM, isoform CRA_b [Mus
           musculus]
 gi|148666974|gb|EDK99390.1| cell adhesion molecule with homology to L1CAM, isoform CRA_b [Mus
           musculus]
          Length = 1210

 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 177/729 (24%), Positives = 296/729 (40%), Gaps = 74/729 (10%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P  Q  +   +  L+   + L C   G P P   WSK G  + P  R +   + K+L I+
Sbjct: 241 PPAQMGSLSAKTVLKGDTLLLECFAEGLPTPHIQWSKPGSEL-PEGRATIEVHEKTLKIE 299

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGL 152
           ++ + D+G+Y C  +N +G+A S+   ++V   P +  +P+    +   +    C+A G 
Sbjct: 300 NISYQDRGNYRCTANNLLGKA-SHDFHVTVEEPPRWKKKPQSAVYSTGSSGILLCEAEGE 358

Query: 153 PEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYV 212
           P+P I W  NG PI + P  P   + P  I+  NL  + TG Y C A+N  G +  +  +
Sbjct: 359 PQPTIKWRLNGLPIEKHP-FPGDFMFPREISFTNLLPNHTGVYQCEASNIHGTILANANI 417

Query: 213 NVLAHAPEITEAPKDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILET 269
           +V+   P I    ++ Y TV G +  L C  F +PK  V W        L G RY   E 
Sbjct: 418 DVIDVIPLIKTKNEENYATVVGYSAFLHCEYFASPKATVVWEVADETHPLEGDRYHTHEN 477

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I      D+G Y+C+  N +G A  + +L ++  T +   P++  +         C
Sbjct: 478 GTLEIYRTTEEDAGSYSCWVDNAMGKAVITANLDIRNATKLRVSPKNPRIPKSHVLELYC 537

Query: 330 NAVSDPSLK--LSIVWLRGSEPIDFE--SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            +  D  LK  L + W +  E  +     + R V    Y LT++  +  D G Y+C AQT
Sbjct: 538 ESQCDSHLKHSLKLSWSKDGEAFEMNGTEDGRIVIDGAY-LTISNITAEDQGVYSCSAQT 596

Query: 386 ELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE 445
            LD    +  +TV    + P N  L +  + +   +SW      + +     Y V+    
Sbjct: 597 SLDSTSEKTQVTVLGVPDPPGNLHLSERQN-RSVRLSWEAGDDHNSK--ISEYIVEFEGN 653

Query: 446 KDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN---GAYNGPPSEIISFVTPEG 502
           ++  G   EL   +GE T   V    P  +   RV A N    ++   PS+     TP  
Sbjct: 654 REEPGKWEELTRVQGEETDV-VLSLAPYVRYQFRVTAVNEVGRSHASLPSD--HHETPPA 710

Query: 503 VPG-TVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
            P    Q++           +KW  +K  + NG  + YK+ ++     +           
Sbjct: 711 APDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYKVSWKPQGAPE---------EW 761

Query: 560 SDPTTTSAKLAGLEPST--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN--VEGRGST 614
            +   T+  L  + P+    Y + +    + G   + + +  Y     P    V  R   
Sbjct: 762 EEEIVTNHTLRVMTPTVYAPYDVKVQAINQLGSSPDPQPVTLYSGEDYPSTAPVIQRVDV 821

Query: 615 PNNLV--ISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
            N+ +  ++W+++P+   +     Y+I W        W    +LD R             
Sbjct: 822 MNSTLVKVTWSSIPKETVHGLLRGYQINW--------WKTKSLLDGRT-----------H 862

Query: 673 PYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 732
           P E+ +++                  G+  +  V    P S+    VLA+N    GP SE
Sbjct: 863 PKEVNILRF----------------SGQRNSGMVPSLDPFSEFHLTVLAYNSKGAGPESE 906

Query: 733 IISFVTPEG 741
              F TPEG
Sbjct: 907 PYIFQTPEG 915



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 140/583 (24%), Positives = 241/583 (41%), Gaps = 67/583 (11%)

Query: 53   LFCIFGGTPLPQTIW--SKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L C +  +P    +W  + +  P+   DR      G   I +  E  D GSY+C V N +
Sbjct: 444  LHCEYFASPKATVVWEVADETHPLE-GDRYHTHENGTLEIYRTTE-EDAGSYSCWVDNAM 501

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA---SGLPEP-EIHWVHNGKPI 166
            G+A   + +L +  A    V P+     +   +   C++   S L    ++ W  +G+  
Sbjct: 502  GKA-VITANLDIRNATKLRVSPKNPRIPKSHVLELYCESQCDSHLKHSLKLSWSKDGEAF 560

Query: 167  SQ-APPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
                  + R  +    +TI N+   D G Y C+A  SL    +   V VL     + + P
Sbjct: 561  EMNGTEDGRIVIDGAYLTISNITAEDQGVYSCSAQTSLDSTSEKTQVTVLG----VPDPP 616

Query: 226  KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQK------ELTG-----GRYTILETGDL 272
             + +  +   ++V L+         E    HN K      E  G     G++  L     
Sbjct: 617  GNLHLSERQNRSVRLSW--------EAGDDHNSKISEYIVEFEGNREEPGKWEELTRVQG 668

Query: 273  KITDVAFADSG----EYTCFARNKLGTAQGSGSLTVKEH----THITDQPEDYEVEAGQS 324
            + TDV  + +     ++   A N++G +  S  L    H          P++  V+A Q 
Sbjct: 669  EETDVVLSLAPYVRYQFRVTAVNEVGRSHAS--LPSDHHETPPAAPDKNPQNIRVQASQP 726

Query: 325  AT-------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSG 377
                      +    + P L+  + W     P ++E E   + +N ++L V   +     
Sbjct: 727  KEMIIKWEPLKSMEQNGPGLEYKVSWKPQGAPEEWEEE---IVTN-HTLRVMTPTVYAPY 782

Query: 378  QYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV---VSWNPVSPQSLRGH 434
                +A  +L        +T+    + PS   +IQ +D   +    V+W+ +  +++ G 
Sbjct: 783  DVKVQAINQLGSSPDPQPVTLYSGEDYPSTAPVIQRVDVMNSTLVKVTWSSIPKETVHGL 842

Query: 435  FRGYKVQTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNG 489
             RGY++  W  K   DG    +E+ + +  G+  +  V    P S+    VLA+N    G
Sbjct: 843  LRGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDPFSEFHLTVLAYNSKGAG 902

Query: 490  PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-K 548
            P SE   F TPEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T +
Sbjct: 903  PESEPYIFQTPEGVPEQPSFLKVIKVDKDTATLSWGLPKKLNGNLTGYLLQYQIINDTYE 962

Query: 549  VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            +G L E    ++ P+ +S  L+ L  +TKY+ +L   T  G G
Sbjct: 963  LGELNEI--NVTTPSKSSWHLSNLNSTTKYKFYLRACTSRGCG 1003



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 163/390 (41%), Gaps = 35/390 (8%)

Query: 34  KQQYVTRKKEVALR-NKKVELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLI 90
           KQ YV    +VA   ++  ++ C   G P P   W+KD  P + SD   I+  N G   I
Sbjct: 40  KQSYV----QVAFPFDEYFQIECEAKGNPEPIFSWTKDDKPFDLSDPRIIAANNSGTFKI 95

Query: 91  IKHVEFSD-QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK 148
                 S  QG Y C  SN +G A S  I+  V   P F  E  E I+  E +++   C 
Sbjct: 96  PNEGHISHFQGKYRCFASNRLGTAVSEEIEFIVPGVPKFPKEKIEPIDVEEGDSIVLPCN 155

Query: 149 -ASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-NSLG 204
              GLP   I+W++   + I Q       + G   +   N+ ++D+ N Y C A    L 
Sbjct: 156 PPKGLPPLHIYWMNIELEHIEQDERVYMSQRG--DLYFANVEENDSRNDYCCFAAFPKLR 213

Query: 205 YVYKDVYVNVLAHA--------PEITEAPKDEYTVDGKTV------VLTCRVFGAPKPEV 250
            + + + + +  ++        P++   P    ++  KTV      +L C   G P P +
Sbjct: 214 TIVQKMPMKLTVNSSNSIKQRKPKLLLPPAQMGSLSAKTVLKGDTLLLECFAEGLPTPHI 273

Query: 251 NWIHNQKELTGGRYTI-LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH 309
            W     EL  GR TI +    LKI ++++ D G Y C A N LG A     +TV+E   
Sbjct: 274 QWSKPGSELPEGRATIEVHEKTLKIENISYQDRGNYRCTANNLLGKASHDFHVTVEEPPR 333

Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP-RFVQSNDYSLTV 368
              +P+      G S    C A  +P  + +I W     PI+    P  F+   + S T 
Sbjct: 334 WKKKPQSAVYSTGSSGILLCEAEGEP--QPTIKWRLNGLPIEKHPFPGDFMFPREISFTN 391

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTV 398
              +   +G Y C A      I A A + V
Sbjct: 392 LLPNH--TGVYQCEASNIHGTILANANIDV 419



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 121/587 (20%), Positives = 227/587 (38%), Gaps = 52/587 (8%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
           L C   G P P   W  +G+PI          + + +   ++  +  G Y CE SN  G 
Sbjct: 351 LLCEAEGEPQPTIKWRLNGLPIEKHPFPGDFMFPREISFTNLLPNHTGVYQCEASNIHGT 410

Query: 113 -AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHW--VHNGKPISQA 169
              + +ID+  +     T   E        +    C+    P+  + W       P+   
Sbjct: 411 ILANANIDVIDVIPLIKTKNEENYATVVGYSAFLHCEYFASPKATVVWEVADETHPLE-- 468

Query: 170 PPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
               R     N  + I    + D G+Y C   N++G       +++  +A ++  +PK+ 
Sbjct: 469 --GDRYHTHENGTLEIYRTTEEDAGSYSCWVDNAMGKAVITANLDI-RNATKLRVSPKNP 525

Query: 229 YTVDGKTVVLTCRV----FGAPKPEVNWIHNQK--ELTG---GRYTILETGDLKITDVAF 279
                  + L C            +++W  + +  E+ G   GR  +++   L I+++  
Sbjct: 526 RIPKSHVLELYCESQCDSHLKHSLKLSWSKDGEAFEMNGTEDGR-IVIDGAYLTISNITA 584

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSDPSL 337
            D G Y+C A+  L +      +TV     + D P +  +   Q+ + R +  A  D + 
Sbjct: 585 EDQGVYSCSAQTSLDSTSEKTQVTV---LGVPDPPGNLHLSERQNRSVRLSWEAGDDHNS 641

Query: 338 KLS--IVWLRGS--EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393
           K+S  IV   G+  EP  +E   R VQ  +  + ++ +  +   +Y  R     +   + 
Sbjct: 642 KISEYIVEFEGNREEPGKWEELTR-VQGEETDVVLSLAPYV---RYQFRVTAVNEVGRSH 697

Query: 394 ATLTVQ-------VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
           A+L           P + P N   +Q    K+ ++ W P+      G    YKV +W  +
Sbjct: 698 ASLPSDHHETPPAAPDKNPQNIR-VQASQPKEMIIKWEPLKSMEQNGPGLEYKV-SWKPQ 755

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGT 506
                  E IV            + P      +V A N   + P  + ++  + E  P T
Sbjct: 756 GAPEEWEEEIVTNHTLRVMTPTVYAPYD---VKVQAINQLGSSPDPQPVTLYSGEDYPST 812

Query: 507 VQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKI---KYQSVKGTKVGPLLERLPYIS 560
              ++ +  + S+   + W  +  E  +G+L GY+I   K +S+   +  P    +   S
Sbjct: 813 APVIQRVDVMNSTLVKVTWSSIPKETVHGLLRGYQINWWKTKSLLDGRTHPKEVNILRFS 872

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-YLFYVPFKNPD 606
                S  +  L+P +++ + +  Y   G G ES+ Y+F  P   P+
Sbjct: 873 G-QRNSGMVPSLDPFSEFHLTVLAYNSKGAGPESEPYIFQTPEGVPE 918



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 116/305 (38%), Gaps = 22/305 (7%)

Query: 118 IDLSVLAAPYFTVEPEFINAAE--EETVTFECKASGLPEPEIHWVHNGKPISQAPPN--P 173
           I LSV   P   V+  ++  A   +E    EC+A G PEP   W  + KP   + P    
Sbjct: 28  IPLSVQQVPTI-VKQSYVQVAFPFDEYFQIECEAKGNPEPIFSWTKDDKPFDLSDPRIIA 86

Query: 174 RRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-D 232
               G  +I  E       G Y C A+N LG    +    ++   P+  +   +   V +
Sbjct: 87  ANNSGTFKIPNEGHISHFQGKYRCFASNRLGTAVSEEIEFIVPGVPKFPKEKIEPIDVEE 146

Query: 233 GKTVVLTCR-VFGAPKPEVNWIHNQKELT--GGRYTILETGDLKITDVAFADS-GEYTCF 288
           G ++VL C    G P   + W++ + E      R  + + GDL   +V   DS  +Y CF
Sbjct: 147 GDSIVLPCNPPKGLPPLHIYWMNIELEHIEQDERVYMSQRGDLYFANVEENDSRNDYCCF 206

Query: 289 AR-NKLGT--AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLR 345
           A   KL T   +    LTV     I  +     +   Q  +     V      L   +  
Sbjct: 207 AAFPKLRTIVQKMPMKLTVNSSNSIKQRKPKLLLPPAQMGSLSAKTVLKGDTLLLECFAE 266

Query: 346 G--------SEPIDFESEPRF-VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
           G        S+P     E R  ++ ++ +L +   S  D G Y C A   L        +
Sbjct: 267 GLPTPHIQWSKPGSELPEGRATIEVHEKTLKIENISYQDRGNYRCTANNLLGKASHDFHV 326

Query: 397 TVQVP 401
           TV+ P
Sbjct: 327 TVEEP 331


>gi|28972103|dbj|BAC65505.1| mKIAA0230 protein [Mus musculus]
          Length = 1431

 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 179/360 (49%), Gaps = 17/360 (4%)

Query: 51  VELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           V   C   G P P+ IW ++   + +    R++  + G +L+I++ + +D+G Y C   N
Sbjct: 216 VYFTCRAEGNPKPEIIWLRNNNELSMKTDSRLNLLDDG-TLMIQNTQEADEGVYQCMAKN 274

Query: 109 GVGEAKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             GEAK+  + L  L   A P F ++P+       E+VT EC A+G P P+I W    + 
Sbjct: 275 VAGEAKTQEVTLRYLGSPARPTFVIQPQNTEVLVGESVTLECSATGHPLPQITWTRGDR- 333

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            +  P +PR  + P+  + I+N+ +SD+G Y C A+NS+  ++   ++ V A  P+ T  
Sbjct: 334 -TPLPIDPRVNITPSGGLYIQNVAQSDSGEYTCFASNSVDSIHATAFIIVQA-LPQFTVT 391

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSG 283
           P+    ++G+TV   C   G P+P + W     +L+   R+ +L +G L+I+ VA  D G
Sbjct: 392 PQSRVVIEGQTVDFQCAAKGHPQPVIAWTKGGSQLSVDRRHLVLSSGTLRISGVALHDQG 451

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +Y C A N +G+ +    LTV+          P D  VE G +    C++  +P  + +I
Sbjct: 452 QYECQAVNIIGSQKVVAHLTVQPRVTPVFASIPSDMTVEVGTNVQLPCSSQGEP--EPAI 509

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            W    + +      +F  S +  LT+      D+G+Y C A+  + +      L+V VP
Sbjct: 510 TW--NKDGVQVTESGKFHISPEGFLTINDVGTADAGRYECVARNTIGYASVSMVLSVNVP 567



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/264 (34%), Positives = 121/264 (45%), Gaps = 11/264 (4%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDG---VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           L  + V L C   G PLPQ  W++     +PI+P   I+       L I++V  SD G Y
Sbjct: 307 LVGESVTLECSATGHPLPQITWTRGDRTPLPIDPRVNITPSG---GLYIQNVAQSDSGEY 363

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
           TC  SN V    + +  + V A P FTV P+     E +TV F+C A G P+P I W   
Sbjct: 364 TCFASNSVDSIHATAF-IIVQALPQFTVTPQSRVVIEGQTVDFQCAAKGHPQPVIAWTKG 422

Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA-PEI 221
           G  +S    +     G  RI+   L   D G Y C A N +G      ++ V     P  
Sbjct: 423 GSQLSVDRRHLVLSSGTLRISGVALH--DQGQYECQAVNIIGSQKVVAHLTVQPRVTPVF 480

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
              P D     G  V L C   G P+P + W  +  ++T  G++ I   G L I DV  A
Sbjct: 481 ASIPSDMTVEVGTNVQLPCSSQGEPEPAITWNKDGVQVTESGKFHISPEGFLTINDVGTA 540

Query: 281 DSGEYTCFARNKLGTAQGSGSLTV 304
           D+G Y C ARN +G A  S  L+V
Sbjct: 541 DAGRYECVARNTIGYASVSMVLSV 564



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 137/308 (44%), Gaps = 11/308 (3%)

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAA--PYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           Q + TCE    +      +I    L    P  T EP+  +     TV F C+A G P+PE
Sbjct: 170 QAAATCEYPRRIQGRSVATITPEELNCERPRITSEPQDADVTSGNTVYFTCRAEGNPKPE 229

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV-YKDVYVNVL 215
           I W+ N   +S    +    +    + I+N +++D G Y C A N  G    ++V +  L
Sbjct: 230 IIWLRNNNELSMKTDSRLNLLDDGTLMIQNTQEADEGVYQCMAKNVAGEAKTQEVTLRYL 289

Query: 216 AH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGD 271
                P     P++   + G++V L C   G P P++ W    +       R  I  +G 
Sbjct: 290 GSPARPTFVIQPQNTEVLVGESVTLECSATGHPLPQITWTRGDRTPLPIDPRVNITPSGG 349

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
           L I +VA +DSGEYTCFA N + +   +  + V+     T  P+   V  GQ+  F+C A
Sbjct: 350 LYIQNVAQSDSGEYTCFASNSVDSIHATAFIIVQALPQFTVTPQSRVVIEGQTVDFQCAA 409

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
              P  +  I W +G   +  +     + S   +L ++  +  D GQY C+A   +   +
Sbjct: 410 KGHP--QPVIAWTKGGSQLSVDRRHLVLSSG--TLRISGVALHDQGQYECQAVNIIGSQK 465

Query: 392 AQATLTVQ 399
             A LTVQ
Sbjct: 466 VVAHLTVQ 473


>gi|241056034|ref|XP_002407743.1| conserved hypothetical protein [Ixodes scapularis]
 gi|215492257|gb|EEC01898.1| conserved hypothetical protein [Ixodes scapularis]
          Length = 717

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 161/637 (25%), Positives = 255/637 (40%), Gaps = 74/637 (11%)

Query: 59  GTPLPQTIWSKDGVPI-NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYS 117
           G P P   W KDG  +   + RI    +G SL+I  V  +DQG Y C  +N +G  ++ +
Sbjct: 30  GHPEPSVTWFKDGAQVATGTGRIRLLGHG-SLLIADVRHADQGRYVCRAANLLGTRETPA 88

Query: 118 IDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHW-VHNGK-PISQAPPNPRR 175
             LSV   PYF   PE +    +ETV F+CK +G P+P + W   +GK P+ +A     +
Sbjct: 89  ATLSVHTKPYFVRVPEDVTTLADETVEFQCKVNGDPKPTVTWRRQDGKMPVGRANIQEDK 148

Query: 176 KVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKT 235
                 + I+N+   D G Y C + N +G V     + V +  P     P+D+       
Sbjct: 149 S-----LRIQNVAPMDEGTYICESQNFVGSVSASASLTVHSR-PSFRLTPEDQKVGLNGV 202

Query: 236 VVLTCRVFGAPKPEVNWIHNQKEL------TGGRYTILETGDLKITDVAFADSGEYTCFA 289
               C   G P P V W    K++      + GR+++   G L I+ V   D G YTC A
Sbjct: 203 AKFDCLATGNPLPSVFWTREGKQVLMFPGKSHGRFSVTNEGTLVISSVRKEDRGYYTCSA 262

Query: 290 RNKLGTAQGSGSLTVKEHTH-----ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWL 344
            + +G++   G L V  +       I   P +  +    +A   C A   P+   ++ W 
Sbjct: 263 LSVVGSSMAKGHLEVTANADLPPPVIRLGPANQTLPINTAAIMPCEASGKPT--PTVRWQ 320

Query: 345 RGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEA 404
               P+  ++ PR+V     +L +      DSG YTC A TE       A+LTV+ P   
Sbjct: 321 YNGVPLQIDTRPRYVILQSGTLRINGLQITDSGTYTCTASTESGETSWTASLTVESPHNP 380

Query: 405 PSNF---------------TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE 449
             NF                ++  I      ++W   S +      +GY ++ ++     
Sbjct: 381 NVNFHRSPDPSTFPGPPSKPVVVNISETSITLTWR-RSEKVGESSLKGYSIEYYSSDLQS 439

Query: 450 GSI---RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVP-- 504
           G +   R L+     S T  V    P S+    V A N    GPPS     +   G+P  
Sbjct: 440 GWVSGARRLL-----SETYTVQALRPDSRYIFIVRAENSHGLGPPSPASDTIRTLGLPPH 494

Query: 505 ----------------GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTK 548
                             V  L+A    S+A  L W + ++    + G+ I+++ V G  
Sbjct: 495 LLPEYNLDEARAKLTACVVTLLDARAASSTAVKLTW-RIQEDKDYVEGFYIRFRDVSG-- 551

Query: 549 VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-----KYLFYVPFK 603
            G     +  + +   +S  L+ L P TKY   L  +  + +G  S     + L  VP  
Sbjct: 552 -GSQKYNMVTVLNGAASSYVLSDLRPYTKYEFFLVPFFMSVEGPPSNSRSVQTLEDVPTA 610

Query: 604 NPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
            P +V  +        I W+  P    N     Y ++
Sbjct: 611 APQDVTAQVLNVTTATIFWSPPPSQHCNGKLRGYNVY 647



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 164/651 (25%), Positives = 260/651 (39%), Gaps = 95/651 (14%)

Query: 18  NVIATGISASQNRHAPKQQYVTRKKE--VALRNKKVELFCIFGGTPLPQTIWSK-DG-VP 73
           N++ T  + +       + Y  R  E    L ++ VE  C   G P P   W + DG +P
Sbjct: 79  NLLGTRETPAATLSVHTKPYFVRVPEDVTTLADETVEFQCKVNGDPKPTVTWRRQDGKMP 138

Query: 74  INPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPE 133
           +  ++ I +    KSL I++V   D+G+Y CE  N VG   S S  L+V + P F + PE
Sbjct: 139 VGRAN-IQE---DKSLRIQNVAPMDEGTYICESQNFVGSV-SASASLTVHSRPSFRLTPE 193

Query: 134 FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRK---VGPNRITIENLRKS 190
                      F+C A+G P P + W   GK +   P     +        + I ++RK 
Sbjct: 194 DQKVGLNGVAKFDCLATGNPLPSVFWTREGKQVLMFPGKSHGRFSVTNEGTLVISSVRKE 253

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHA----PEITEAPKDEYTVDGKTVVLTCRVFGAP 246
           D G Y C+A + +G      ++ V A+A    P I   P ++        ++ C   G P
Sbjct: 254 DRGYYTCSALSVVGSSMAKGHLEVTANADLPPPVIRLGPANQTLPINTAAIMPCEASGKP 313

Query: 247 KPEVNWIHNQKEL---TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLT 303
            P V W +N   L   T  RY IL++G L+I  +   DSG YTC A  + G    + SLT
Sbjct: 314 TPTVRWQYNGVPLQIDTRPRYVILQSGTLRINGLQITDSGTYTCTASTESGETSWTASLT 373

Query: 304 VKE------HTHITDQPEDYE-----------VEAGQSATF-RCNAVSDPSLK------- 338
           V+       + H +  P  +             E   + T+ R   V + SLK       
Sbjct: 374 VESPHNPNVNFHRSPDPSTFPGPPSKPVVVNISETSITLTWRRSEKVGESSLKGYSIEYY 433

Query: 339 ---LSIVWLRGSEPIDFESEPRFVQS----NDYSLTVTKSSELDSGQYTCRAQT------ 385
              L   W+ G+      SE   VQ+    + Y   V   +    G  +  + T      
Sbjct: 434 SSDLQSGWVSGAR--RLLSETYTVQALRPDSRYIFIVRAENSHGLGPPSPASDTIRTLGL 491

Query: 386 ------ELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV-----VSWNPVSPQSLRGH 434
                 E +  EA+A LT  V          + ++DA+ A      ++W     Q  + +
Sbjct: 492 PPHLLPEYNLDEARAKLTACV----------VTLLDARAASSTAVKLTWR---IQEDKDY 538

Query: 435 FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
             G+ ++      G      + V  G +++  +    P +K    ++ F  +  GPPS  
Sbjct: 539 VEGFYIRFRDVSGGSQKYNMVTVLNGAASSYVLSDLRPYTKYEFFLVPFFMSVEGPPSNS 598

Query: 495 ISFVTPEGVPGTV-QSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGP 551
            S  T E VP    Q + A  L  +   + W  P  +  NG L GY +    V G    P
Sbjct: 599 RSVQTLEDVPTAAPQDVTAQVLNVTTATIFWSPPPSQHCNGKLRGYNVY---VTGNLSEP 655

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF 602
            L +    ++ TT +  +  L+    Y++ +  +T  G G  S     VPF
Sbjct: 656 FLNK---STNSTTNTLLVTNLKAGASYKVRIVAHTSVGSGPLSS---PVPF 700



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/282 (31%), Positives = 128/282 (45%), Gaps = 7/282 (2%)

Query: 128 FTVEPEFINAAEEETVTFECKA-SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIEN 186
           F   P+    A  E+ T EC A  G PEP + W  +G  ++       R +G   + I +
Sbjct: 6   FRATPKSSRVAAGESATLECVAPRGHPEPSVTWFKDGAQVATGT-GRIRLLGHGSLLIAD 64

Query: 187 LRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAP 246
           +R +D G Y C A N LG          +   P     P+D  T+  +TV   C+V G P
Sbjct: 65  VRHADQGRYVCRAANLLGTRETPAATLSVHTKPYFVRVPEDVTTLADETVEFQCKVNGDP 124

Query: 247 KPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE 306
           KP V W     ++  GR  I E   L+I +VA  D G Y C ++N +G+   S SLTV  
Sbjct: 125 KPTVTWRRQDGKMPVGRANIQEDKSLRIQNVAPMDEGTYICESQNFVGSVSASASLTVHS 184

Query: 307 HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLR-GSEPIDF--ESEPRFVQSND 363
                  PED +V     A F C A  +P    S+ W R G + + F  +S  RF  +N+
Sbjct: 185 RPSFRLTPEDQKVGLNGVAKFDCLATGNP--LPSVFWTREGKQVLMFPGKSHGRFSVTNE 242

Query: 364 YSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAP 405
            +L ++   + D G YTC A + +    A+  L V    + P
Sbjct: 243 GTLVISSVRKEDRGYYTCSALSVVGSSMAKGHLEVTANADLP 284


>gi|110347545|ref|NP_031723.2| neural cell adhesion molecule L1-like protein precursor [Mus
           musculus]
 gi|408360031|sp|P70232.2|CHL1_MOUSE RecName: Full=Neural cell adhesion molecule L1-like protein;
           AltName: Full=Cell adhesion molecule with homology to
           L1CAM; AltName: Full=Chl1-like protein; AltName:
           Full=Close homolog of L1; Contains: RecName:
           Full=Processed neural cell adhesion molecule L1-like
           protein; Flags: Precursor
 gi|124297745|gb|AAI31672.1| Cell adhesion molecule with homology to L1CAM [Mus musculus]
 gi|124297981|gb|AAI31671.1| Cell adhesion molecule with homology to L1CAM [Mus musculus]
 gi|148666972|gb|EDK99388.1| cell adhesion molecule with homology to L1CAM, isoform CRA_a [Mus
           musculus]
          Length = 1209

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 177/729 (24%), Positives = 296/729 (40%), Gaps = 74/729 (10%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P  Q  +   +  L+   + L C   G P P   WSK G  + P  R +   + K+L I+
Sbjct: 240 PPAQMGSLSAKTVLKGDTLLLECFAEGLPTPHIQWSKPGSEL-PEGRATIEVHEKTLKIE 298

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGL 152
           ++ + D+G+Y C  +N +G+A S+   ++V   P +  +P+    +   +    C+A G 
Sbjct: 299 NISYQDRGNYRCTANNLLGKA-SHDFHVTVEEPPRWKKKPQSAVYSTGSSGILLCEAEGE 357

Query: 153 PEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYV 212
           P+P I W  NG PI + P  P   + P  I+  NL  + TG Y C A+N  G +  +  +
Sbjct: 358 PQPTIKWRLNGLPIEKHP-FPGDFMFPREISFTNLLPNHTGVYQCEASNIHGTILANANI 416

Query: 213 NVLAHAPEITEAPKDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILET 269
           +V+   P I    ++ Y TV G +  L C  F +PK  V W        L G RY   E 
Sbjct: 417 DVIDVIPLIKTKNEENYATVVGYSAFLHCEYFASPKATVVWEVADETHPLEGDRYHTHEN 476

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I      D+G Y+C+  N +G A  + +L ++  T +   P++  +         C
Sbjct: 477 GTLEIYRTTEEDAGSYSCWVDNAMGKAVITANLDIRNATKLRVSPKNPRIPKSHVLELYC 536

Query: 330 NAVSDPSLK--LSIVWLRGSEPIDFE--SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            +  D  LK  L + W +  E  +     + R V    Y LT++  +  D G Y+C AQT
Sbjct: 537 ESQCDSHLKHSLKLSWSKDGEAFEMNGTEDGRIVIDGAY-LTISNITAEDQGVYSCSAQT 595

Query: 386 ELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE 445
            LD    +  +TV    + P N  L +  + +   +SW      + +     Y V+    
Sbjct: 596 SLDSTSEKTQVTVLGVPDPPGNLHLSERQN-RSVRLSWEAGDDHNSK--ISEYIVEFEGN 652

Query: 446 KDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN---GAYNGPPSEIISFVTPEG 502
           ++  G   EL   +GE T   V    P  +   RV A N    ++   PS+     TP  
Sbjct: 653 REEPGKWEELTRVQGEETDV-VLSLAPYVRYQFRVTAVNEVGRSHASLPSD--HHETPPA 709

Query: 503 VPG-TVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
            P    Q++           +KW  +K  + NG  + YK+ ++     +           
Sbjct: 710 APDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYKVSWKPQGAPE---------EW 760

Query: 560 SDPTTTSAKLAGLEPST--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN--VEGRGST 614
            +   T+  L  + P+    Y + +    + G   + + +  Y     P    V  R   
Sbjct: 761 EEEIVTNHTLRVMTPTVYAPYDVKVQAINQLGSSPDPQPVTLYSGEDYPSTAPVIQRVDV 820

Query: 615 PNNLV--ISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
            N+ +  ++W+++P+   +     Y+I W        W    +LD R             
Sbjct: 821 MNSTLVKVTWSSIPKETVHGLLRGYQINW--------WKTKSLLDGRT-----------H 861

Query: 673 PYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 732
           P E+ +++                  G+  +  V    P S+    VLA+N    GP SE
Sbjct: 862 PKEVNILRF----------------SGQRNSGMVPSLDPFSEFHLTVLAYNSKGAGPESE 905

Query: 733 IISFVTPEG 741
              F TPEG
Sbjct: 906 PYIFQTPEG 914



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 140/583 (24%), Positives = 241/583 (41%), Gaps = 67/583 (11%)

Query: 53   LFCIFGGTPLPQTIW--SKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L C +  +P    +W  + +  P+   DR      G   I +  E  D GSY+C V N +
Sbjct: 443  LHCEYFASPKATVVWEVADETHPLE-GDRYHTHENGTLEIYRTTE-EDAGSYSCWVDNAM 500

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA---SGLPEP-EIHWVHNGKPI 166
            G+A   + +L +  A    V P+     +   +   C++   S L    ++ W  +G+  
Sbjct: 501  GKA-VITANLDIRNATKLRVSPKNPRIPKSHVLELYCESQCDSHLKHSLKLSWSKDGEAF 559

Query: 167  SQ-APPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
                  + R  +    +TI N+   D G Y C+A  SL    +   V VL     + + P
Sbjct: 560  EMNGTEDGRIVIDGAYLTISNITAEDQGVYSCSAQTSLDSTSEKTQVTVLG----VPDPP 615

Query: 226  KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQK------ELTG-----GRYTILETGDL 272
             + +  +   ++V L+         E    HN K      E  G     G++  L     
Sbjct: 616  GNLHLSERQNRSVRLSW--------EAGDDHNSKISEYIVEFEGNREEPGKWEELTRVQG 667

Query: 273  KITDVAFADSG----EYTCFARNKLGTAQGSGSLTVKEH----THITDQPEDYEVEAGQS 324
            + TDV  + +     ++   A N++G +  S  L    H          P++  V+A Q 
Sbjct: 668  EETDVVLSLAPYVRYQFRVTAVNEVGRSHAS--LPSDHHETPPAAPDKNPQNIRVQASQP 725

Query: 325  AT-------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSG 377
                      +    + P L+  + W     P ++E E   + +N ++L V   +     
Sbjct: 726  KEMIIKWEPLKSMEQNGPGLEYKVSWKPQGAPEEWEEE---IVTN-HTLRVMTPTVYAPY 781

Query: 378  QYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV---VSWNPVSPQSLRGH 434
                +A  +L        +T+    + PS   +IQ +D   +    V+W+ +  +++ G 
Sbjct: 782  DVKVQAINQLGSSPDPQPVTLYSGEDYPSTAPVIQRVDVMNSTLVKVTWSSIPKETVHGL 841

Query: 435  FRGYKVQTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNG 489
             RGY++  W  K   DG    +E+ + +  G+  +  V    P S+    VLA+N    G
Sbjct: 842  LRGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDPFSEFHLTVLAYNSKGAG 901

Query: 490  PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-K 548
            P SE   F TPEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T +
Sbjct: 902  PESEPYIFQTPEGVPEQPSFLKVIKVDKDTATLSWGLPKKLNGNLTGYLLQYQIINDTYE 961

Query: 549  VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            +G L E    ++ P+ +S  L+ L  +TKY+ +L   T  G G
Sbjct: 962  LGELNEI--NVTTPSKSSWHLSNLNSTTKYKFYLRACTSRGCG 1002



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 163/390 (41%), Gaps = 35/390 (8%)

Query: 34  KQQYVTRKKEVALR-NKKVELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLI 90
           KQ YV    +VA   ++  ++ C   G P P   W+KD  P + SD   I+  N G   I
Sbjct: 39  KQSYV----QVAFPFDEYFQIECEAKGNPEPIFSWTKDDKPFDLSDPRIIAANNSGTFKI 94

Query: 91  IKHVEFSD-QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK 148
                 S  QG Y C  SN +G A S  I+  V   P F  E  E I+  E +++   C 
Sbjct: 95  PNEGHISHFQGKYRCFASNRLGTAVSEEIEFIVPGVPKFPKEKIEPIDVEEGDSIVLPCN 154

Query: 149 -ASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-NSLG 204
              GLP   I+W++   + I Q       + G   +   N+ ++D+ N Y C A    L 
Sbjct: 155 PPKGLPPLHIYWMNIELEHIEQDERVYMSQRG--DLYFANVEENDSRNDYCCFAAFPKLR 212

Query: 205 YVYKDVYVNVLAHA--------PEITEAPKDEYTVDGKTV------VLTCRVFGAPKPEV 250
            + + + + +  ++        P++   P    ++  KTV      +L C   G P P +
Sbjct: 213 TIVQKMPMKLTVNSSNSIKQRKPKLLLPPAQMGSLSAKTVLKGDTLLLECFAEGLPTPHI 272

Query: 251 NWIHNQKELTGGRYTI-LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH 309
            W     EL  GR TI +    LKI ++++ D G Y C A N LG A     +TV+E   
Sbjct: 273 QWSKPGSELPEGRATIEVHEKTLKIENISYQDRGNYRCTANNLLGKASHDFHVTVEEPPR 332

Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP-RFVQSNDYSLTV 368
              +P+      G S    C A  +P  + +I W     PI+    P  F+   + S T 
Sbjct: 333 WKKKPQSAVYSTGSSGILLCEAEGEP--QPTIKWRLNGLPIEKHPFPGDFMFPREISFTN 390

Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTV 398
              +   +G Y C A      I A A + V
Sbjct: 391 LLPNH--TGVYQCEASNIHGTILANANIDV 418



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 121/587 (20%), Positives = 227/587 (38%), Gaps = 52/587 (8%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
           L C   G P P   W  +G+PI          + + +   ++  +  G Y CE SN  G 
Sbjct: 350 LLCEAEGEPQPTIKWRLNGLPIEKHPFPGDFMFPREISFTNLLPNHTGVYQCEASNIHGT 409

Query: 113 -AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHW--VHNGKPISQA 169
              + +ID+  +     T   E        +    C+    P+  + W       P+   
Sbjct: 410 ILANANIDVIDVIPLIKTKNEENYATVVGYSAFLHCEYFASPKATVVWEVADETHPLE-- 467

Query: 170 PPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
               R     N  + I    + D G+Y C   N++G       +++  +A ++  +PK+ 
Sbjct: 468 --GDRYHTHENGTLEIYRTTEEDAGSYSCWVDNAMGKAVITANLDI-RNATKLRVSPKNP 524

Query: 229 YTVDGKTVVLTCRV----FGAPKPEVNWIHNQK--ELTG---GRYTILETGDLKITDVAF 279
                  + L C            +++W  + +  E+ G   GR  +++   L I+++  
Sbjct: 525 RIPKSHVLELYCESQCDSHLKHSLKLSWSKDGEAFEMNGTEDGR-IVIDGAYLTISNITA 583

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSDPSL 337
            D G Y+C A+  L +      +TV     + D P +  +   Q+ + R +  A  D + 
Sbjct: 584 EDQGVYSCSAQTSLDSTSEKTQVTV---LGVPDPPGNLHLSERQNRSVRLSWEAGDDHNS 640

Query: 338 KLS--IVWLRGS--EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393
           K+S  IV   G+  EP  +E   R VQ  +  + ++ +  +   +Y  R     +   + 
Sbjct: 641 KISEYIVEFEGNREEPGKWEELTR-VQGEETDVVLSLAPYV---RYQFRVTAVNEVGRSH 696

Query: 394 ATLTVQ-------VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
           A+L           P + P N   +Q    K+ ++ W P+      G    YKV +W  +
Sbjct: 697 ASLPSDHHETPPAAPDKNPQNIR-VQASQPKEMIIKWEPLKSMEQNGPGLEYKV-SWKPQ 754

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGT 506
                  E IV            + P      +V A N   + P  + ++  + E  P T
Sbjct: 755 GAPEEWEEEIVTNHTLRVMTPTVYAPYD---VKVQAINQLGSSPDPQPVTLYSGEDYPST 811

Query: 507 VQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKI---KYQSVKGTKVGPLLERLPYIS 560
              ++ +  + S+   + W  +  E  +G+L GY+I   K +S+   +  P    +   S
Sbjct: 812 APVIQRVDVMNSTLVKVTWSSIPKETVHGLLRGYQINWWKTKSLLDGRTHPKEVNILRFS 871

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-YLFYVPFKNPD 606
                S  +  L+P +++ + +  Y   G G ES+ Y+F  P   P+
Sbjct: 872 G-QRNSGMVPSLDPFSEFHLTVLAYNSKGAGPESEPYIFQTPEGVPE 917



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 116/305 (38%), Gaps = 22/305 (7%)

Query: 118 IDLSVLAAPYFTVEPEFINAAE--EETVTFECKASGLPEPEIHWVHNGKPISQAPPN--P 173
           I LSV   P   V+  ++  A   +E    EC+A G PEP   W  + KP   + P    
Sbjct: 27  IPLSVQQVPTI-VKQSYVQVAFPFDEYFQIECEAKGNPEPIFSWTKDDKPFDLSDPRIIA 85

Query: 174 RRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-D 232
               G  +I  E       G Y C A+N LG    +    ++   P+  +   +   V +
Sbjct: 86  ANNSGTFKIPNEGHISHFQGKYRCFASNRLGTAVSEEIEFIVPGVPKFPKEKIEPIDVEE 145

Query: 233 GKTVVLTCR-VFGAPKPEVNWIHNQKELT--GGRYTILETGDLKITDVAFADS-GEYTCF 288
           G ++VL C    G P   + W++ + E      R  + + GDL   +V   DS  +Y CF
Sbjct: 146 GDSIVLPCNPPKGLPPLHIYWMNIELEHIEQDERVYMSQRGDLYFANVEENDSRNDYCCF 205

Query: 289 AR-NKLGT--AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLR 345
           A   KL T   +    LTV     I  +     +   Q  +     V      L   +  
Sbjct: 206 AAFPKLRTIVQKMPMKLTVNSSNSIKQRKPKLLLPPAQMGSLSAKTVLKGDTLLLECFAE 265

Query: 346 G--------SEPIDFESEPRF-VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
           G        S+P     E R  ++ ++ +L +   S  D G Y C A   L        +
Sbjct: 266 GLPTPHIQWSKPGSELPEGRATIEVHEKTLKIENISYQDRGNYRCTANNLLGKASHDFHV 325

Query: 397 TVQVP 401
           TV+ P
Sbjct: 326 TVEEP 330


>gi|91082585|ref|XP_967335.1| PREDICTED: similar to cell adhesion molecule [Tribolium castaneum]
          Length = 1192

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 172/710 (24%), Positives = 294/710 (41%), Gaps = 54/710 (7%)

Query: 43   EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
            +  +  K+V L C+  G P+P   W++ G P+  S  +S  ++ + L I HV+  DQG Y
Sbjct: 470  DAPIAGKEVRLECMAFGYPVPSYNWTRRGAPLPRSAVLS--SFNRVLTIPHVQVEDQGEY 527

Query: 103  TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
             C   N     ++ S+ L++ A P FT+     +A  +  + + C+A G+P+    W  N
Sbjct: 528  VCRAYNDRASTEN-SLILNIQAEPNFTIPLADRHADSKSELVWTCEAFGIPDVNYTWWKN 586

Query: 163  GKPISQAPPNPRRKVGPNRITIENL-RKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
            G+ + +     R ++  N +TI  L ++ D G Y C ATNSL   Y    + VLA  P  
Sbjct: 587  GRQLERD----RIRIQDNVLTIRYLDQERDPGMYQCRATNSLKTKYSSAQLRVLAFRPTF 642

Query: 222  TEAP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVA 278
             + P   + Y  +G +V + C    AP+PE  W  +   L +GG   ILE G+L I+ V+
Sbjct: 643  KKHPLEAETYAAEGGSVTIKCNPEAAPRPEFVWKKDGNVLGSGGHRRILENGNLVISSVS 702

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEV-EAGQSATFRCNAVSDPSL 337
              D G+YTC A N+ G  +  G L V     + +      V   G+    RC A ++  L
Sbjct: 703  RDDEGQYTCRASNQFGVDESKGRLIVLRGPRLIESLTPKIVTTVGRYFDLRCLAETEEML 762

Query: 338  KLSIVWLRGS---EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
             ++ VW         ID ++    ++ +   L+VT ++  D+G+Y C  ++ +  I +++
Sbjct: 763  DIAYVWSHNGIKIRDIDIKNMNYRLRIDGGFLSVTNATFTDAGEYECTIKSTVGKISSRS 822

Query: 395  TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV-------QTWTEKD 447
             + V+          +   I      + W   +        RGY V       QTW    
Sbjct: 823  VVVVEG--PPGPPGGVTVSIQKSSFTLQWTDGATHG--SQIRGYTVSGRTNWNQTWVNIS 878

Query: 448  GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-IISFVTPEGVPGT 506
                +RE+    G+  +       P S    R+ A+N    GPPS       TP   P  
Sbjct: 879  YIVDVREIDRYTGQKESLIDTALTPWSTYEFRIAAWNSWGMGPPSAPSPRHSTPPDRPYI 938

Query: 507  V-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
               ++           + W  +KP++ NG  + Y+I ++  K  +V    + L    +  
Sbjct: 939  APYNIGGGGGKIGDLTITWSPLKPDEQNGPGIYYRIFWKR-KDQEVEFQTQELKEFGNTG 997

Query: 564  TTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFY----VPFKNPDNVEGRGSTPNNL 618
                 +      T+Y + +    + G G  S +++ Y    +P   P  V  R      L
Sbjct: 998  MAVVHIPPQYYYTEYIVKVQAINQIGPGPISPEHVIYSAEDMPQVAPQLVVARSFNSTAL 1057

Query: 619  VISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
             +SW     I+      + ++   R           V+ WR  +  L  +P  + Y+I+V
Sbjct: 1058 NVSWVP---IDQTREKVRGKLIGHR-----------VMVWRYVQPSLEEEP-LKGYKIRV 1102

Query: 679  VQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 728
               W       +  + I   G      V+   P      RVLA++   +G
Sbjct: 1103 ---WEFDQDISTANDTIKPFGGKLEAYVNNLQPGKTYRMRVLAYSNGGDG 1149



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 138/594 (23%), Positives = 220/594 (37%), Gaps = 66/594 (11%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRIS-QGNYGKSLIIKHVEFS-DQGSYTCEVSNGVGE 112
            C   G P     W K+G  +   DRI  Q N    L I++++   D G Y C  +N + +
Sbjct: 571  CEAFGIPDVNYTWWKNGRQLE-RDRIRIQDN---VLTIRYLDQERDPGMYQCRATNSL-K 625

Query: 113  AKSYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
             K  S  L VLA  P F   P      AAE  +VT +C     P PE  W  +G  +   
Sbjct: 626  TKYSSAQLRVLAFRPTFKKHPLEAETYAAEGGSVTIKCNPEAAPRPEFVWKKDGNVLGSG 685

Query: 170  PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA--PKD 227
                RR +    + I ++ + D G Y C A+N  G       + VL   P + E+  PK 
Sbjct: 686  --GHRRILENGNLVISSVSRDDEGQYTCRASNQFGVDESKGRLIVL-RGPRLIESLTPKI 742

Query: 228  EYTVDGKTVVLTCRVFGAPKPEVN--WIHN-----QKELTGGRYTI-LETGDLKITDVAF 279
              TV G+   L C        ++   W HN       ++    Y + ++ G L +T+  F
Sbjct: 743  VTTV-GRYFDLRCLAETEEMLDIAYVWSHNGIKIRDIDIKNMNYRLRIDGGFLSVTNATF 801

Query: 280  ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD------QPEDYEVEAGQSAT----FRC 329
             D+GEY C  ++ +G       + V+             Q   + ++    AT     R 
Sbjct: 802  TDAGEYECTIKSTVGKISSRSVVVVEGPPGPPGGVTVSIQKSSFTLQWTDGATHGSQIRG 861

Query: 330  NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN----DYSLTVTKSSELDSGQYTCRAQT 385
              VS  +   +  W+  S  +D     R+        D +LT   + E     +      
Sbjct: 862  YTVSGRT-NWNQTWVNISYIVDVREIDRYTGQKESLIDTALTPWSTYEFRIAAWNSWGMG 920

Query: 386  ELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE 445
                   + +     P  AP N             ++W+P+ P    G    Y++  W  
Sbjct: 921  PPSAPSPRHSTPPDRPYIAPYN-IGGGGGKIGDLTITWSPLKPDEQNGPGIYYRI-FWKR 978

Query: 446  KDGEGSIRELIVNKGESTTTEVDKFVPA---SKNFARVLAFNGAYNGPPSEIISFVTPEG 502
            KD E   +   + +  +T   V    P    ++   +V A N    GP S      + E 
Sbjct: 979  KDQEVEFQTQELKEFGNTGMAVVHIPPQYYYTEYIVKVQAINQIGPGPISPEHVIYSAED 1038

Query: 503  VPGTV-QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLP---- 557
            +P    Q + A    S+A  + WV  +Q    + G  I ++ +    V P LE  P    
Sbjct: 1039 MPQVAPQLVVARSFNSTALNVSWVPIDQTREKVRGKLIGHRVMVWRYVQPSLEEEPLKGY 1098

Query: 558  ------YISDPTTTS-----------AKLAGLEPSTKYRIHLAGYTKAGDGAES 594
                  +  D +T +           A +  L+P   YR+ +  Y+  GDG  S
Sbjct: 1099 KIRVWEFDQDISTANDTIKPFGGKLEAYVNNLQPGKTYRMRVLAYSNGGDGRMS 1152


>gi|26333963|dbj|BAC30699.1| unnamed protein product [Mus musculus]
          Length = 1150

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 177/729 (24%), Positives = 296/729 (40%), Gaps = 74/729 (10%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P  Q  +   +  L+   + L C   G P P   WSK G  + P  R +   + K+L I+
Sbjct: 256 PPAQMGSLSAKTVLKGDTLLLECFAEGLPTPHIQWSKPGSEL-PEGRATIEVHEKTLKIE 314

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGL 152
           ++ + D+G+Y C  +N +G+A S+   ++V   P +  +P+    +   +    C+A G 
Sbjct: 315 NISYQDRGNYRCTANNLLGKA-SHDFHVTVEEPPRWKKKPQSAVYSTGSSGILLCEAEGE 373

Query: 153 PEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYV 212
           P+P I W  NG PI + P  P   + P  I+  NL  + TG Y C A+N  G +  +  +
Sbjct: 374 PQPTIKWRLNGLPIEKHP-FPGDFMFPREISFTNLLPNHTGVYQCEASNIHGTILANANI 432

Query: 213 NVLAHAPEITEAPKDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILET 269
           +V+   P I    ++ Y TV G +  L C  F +PK  V W        L G RY   E 
Sbjct: 433 DVIDVIPLIKTKNEENYATVVGYSAFLHCEYFASPKATVVWEVADETHPLEGDRYHTHEN 492

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L+I      D+G Y+C+  N +G A  + +L ++  T +   P++  +         C
Sbjct: 493 GTLEIYRTTEEDAGSYSCWVDNAMGKAVITANLDIRNATKLRVSPKNPRIPKSHVLELYC 552

Query: 330 NAVSDPSLK--LSIVWLRGSEPIDFE--SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            +  D  LK  L + W +  E  +     + R V    Y LT++  +  D G Y+C AQT
Sbjct: 553 ESQCDSHLKHSLKLSWSKDGEAFEMNGTEDGRIVIDGAY-LTISNITAEDQGVYSCSAQT 611

Query: 386 ELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE 445
            LD    +  +TV    + P N  L +  + +   +SW      + +     Y V+    
Sbjct: 612 SLDSTSEKTQVTVLGVPDPPGNLHLSERQN-RSVRLSWEAGDDHNSK--ISEYIVEFEGN 668

Query: 446 KDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN---GAYNGPPSEIISFVTPEG 502
           ++  G   EL   +GE T   V    P  +   RV A N    ++   PS+     TP  
Sbjct: 669 REEPGKWEELTRVQGEETDV-VLSLAPYVRYQFRVTAVNEVGRSHASLPSD--HHETPPA 725

Query: 503 VPG-TVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
            P    Q++           +KW  +K  + NG  + YK+ ++     +           
Sbjct: 726 APDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYKVSWKPQGAPE---------EW 776

Query: 560 SDPTTTSAKLAGLEPST--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN--VEGRGST 614
            +   T+  L  + P+    Y + +    + G   + + +  Y     P    V  R   
Sbjct: 777 EEEIVTNHTLRVMTPTVYAPYDVKVQAINQLGSSPDPQPVTLYSGEDYPSTAPVIQRVDV 836

Query: 615 PNNLV--ISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
            N+ +  ++W+++P+   +     Y+I W        W    +LD R             
Sbjct: 837 MNSTLVKVTWSSIPKETVHGLLRGYQINW--------WKTKSLLDGRT-----------H 877

Query: 673 PYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 732
           P E+ +++                  G+  +  V    P S+    VLA+N    GP SE
Sbjct: 878 PKEVNILRF----------------SGQRNSGMVPSLDPFSEFHLTVLAYNSKGAGPESE 921

Query: 733 IISFVTPEG 741
              F TPEG
Sbjct: 922 PYIFQTPEG 930



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 140/583 (24%), Positives = 241/583 (41%), Gaps = 67/583 (11%)

Query: 53   LFCIFGGTPLPQTIW--SKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            L C +  +P    +W  + +  P+   DR      G   I +  E  D GSY+C V N +
Sbjct: 459  LHCEYFASPKATVVWEVADETHPLE-GDRYHTHENGTLEIYRTTE-EDAGSYSCWVDNAM 516

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA---SGLPEP-EIHWVHNGKPI 166
            G+A   + +L +  A    V P+     +   +   C++   S L    ++ W  +G+  
Sbjct: 517  GKA-VITANLDIRNATKLRVSPKNPRIPKSHVLELYCESQCDSHLKHSLKLSWSKDGEAF 575

Query: 167  SQ-APPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
                  + R  +    +TI N+   D G Y C+A  SL    +   V VL     + + P
Sbjct: 576  EMNGTEDGRIVIDGAYLTISNITAEDQGVYSCSAQTSLDSTSEKTQVTVLG----VPDPP 631

Query: 226  KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQK------ELTG-----GRYTILETGDL 272
             + +  +   ++V L+         E    HN K      E  G     G++  L     
Sbjct: 632  GNLHLSERQNRSVRLSW--------EAGDDHNSKISEYIVEFEGNREEPGKWEELTRVQG 683

Query: 273  KITDVAFADSG----EYTCFARNKLGTAQGSGSLTVKEH----THITDQPEDYEVEAGQS 324
            + TDV  + +     ++   A N++G +  S  L    H          P++  V+A Q 
Sbjct: 684  EETDVVLSLAPYVRYQFRVTAVNEVGRSHAS--LPSDHHETPPAAPDKNPQNIRVQASQP 741

Query: 325  AT-------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSG 377
                      +    + P L+  + W     P ++E E   + +N ++L V   +     
Sbjct: 742  KEMIIKWEPLKSMEQNGPGLEYKVSWKPQGAPEEWEEE---IVTN-HTLRVMTPTVYAPY 797

Query: 378  QYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV---VSWNPVSPQSLRGH 434
                +A  +L        +T+    + PS   +IQ +D   +    V+W+ +  +++ G 
Sbjct: 798  DVKVQAINQLGSSPDPQPVTLYSGEDYPSTAPVIQRVDVMNSTLVKVTWSSIPKETVHGL 857

Query: 435  FRGYKVQTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNG 489
             RGY++  W  K   DG    +E+ + +  G+  +  V    P S+    VLA+N    G
Sbjct: 858  LRGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDPFSEFHLTVLAYNSKGAG 917

Query: 490  PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-K 548
            P SE   F TPEGVP     L+ I +      L W  P++ NG L GY ++YQ +  T +
Sbjct: 918  PESEPYIFQTPEGVPEQPSFLKVIKVDKDTATLSWGLPKKLNGNLTGYLLQYQIINDTYE 977

Query: 549  VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            +G L E    ++ P+ +S  L+ L  +TKY+ +L   T  G G
Sbjct: 978  LGELNEI--NVTTPSKSSWHLSNLNSTTKYKFYLRACTSRGCG 1018



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 163/406 (40%), Gaps = 51/406 (12%)

Query: 34  KQQYVTRKKEVALR-NKKVELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLI 90
           KQ YV    +VA   ++  ++ C   G P P   W+KD  P + SD   I+  N G   I
Sbjct: 39  KQSYV----QVAFPFDEYFQIECEAKGNPEPIFSWTKDDKPFDLSDPRIIAANNSGTFKI 94

Query: 91  IKHVEFSD-QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK 148
                 S  QG Y C  SN +G A S  I+  V   P F  E  E I+  E +++   C 
Sbjct: 95  PNEGHISHFQGKYRCFASNRLGTAVSEEIEFIVPGVPKFPKEKIEPIDVEEGDSIVLPCN 154

Query: 149 -ASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT----- 200
              GLP   I+W++   + I Q       + G   +   N+ ++D+ N Y C A      
Sbjct: 155 PPKGLPPLHIYWMNIELEHIEQDERVYMSQRG--DLYFANVEENDSRNDYCCFAAFPKLR 212

Query: 201 NSLGYVYKDVYVNVLAHA--------------------PEITEAPKDEYTVDGKTV---- 236
             +  +   + VN L HA                    P++   P    ++  KTV    
Sbjct: 213 TIVQKMPMKLTVNSLKHASDSSSSTEICSQANSIKQRKPKLLLPPAQMGSLSAKTVLKGD 272

Query: 237 --VLTCRVFGAPKPEVNWIHNQKELTGGRYTI-LETGDLKITDVAFADSGEYTCFARNKL 293
             +L C   G P P + W     EL  GR TI +    LKI ++++ D G Y C A N L
Sbjct: 273 TLLLECFAEGLPTPHIQWSKPGSELPEGRATIEVHEKTLKIENISYQDRGNYRCTANNLL 332

Query: 294 GTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFE 353
           G A     +TV+E      +P+      G S    C A  +P  + +I W     PI+  
Sbjct: 333 GKASHDFHVTVEEPPRWKKKPQSAVYSTGSSGILLCEAEGEP--QPTIKWRLNGLPIEKH 390

Query: 354 SEP-RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             P  F+   + S T    +   +G Y C A      I A A + V
Sbjct: 391 PFPGDFMFPREISFTNLLPNH--TGVYQCEASNIHGTILANANIDV 434



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 121/587 (20%), Positives = 227/587 (38%), Gaps = 52/587 (8%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
           L C   G P P   W  +G+PI          + + +   ++  +  G Y CE SN  G 
Sbjct: 366 LLCEAEGEPQPTIKWRLNGLPIEKHPFPGDFMFPREISFTNLLPNHTGVYQCEASNIHGT 425

Query: 113 -AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHW--VHNGKPISQA 169
              + +ID+  +     T   E        +    C+    P+  + W       P+   
Sbjct: 426 ILANANIDVIDVIPLIKTKNEENYATVVGYSAFLHCEYFASPKATVVWEVADETHPLE-- 483

Query: 170 PPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
               R     N  + I    + D G+Y C   N++G       +++  +A ++  +PK+ 
Sbjct: 484 --GDRYHTHENGTLEIYRTTEEDAGSYSCWVDNAMGKAVITANLDI-RNATKLRVSPKNP 540

Query: 229 YTVDGKTVVLTCRV----FGAPKPEVNWIHNQK--ELTG---GRYTILETGDLKITDVAF 279
                  + L C            +++W  + +  E+ G   GR  +++   L I+++  
Sbjct: 541 RIPKSHVLELYCESQCDSHLKHSLKLSWSKDGEAFEMNGTEDGR-IVIDGAYLTISNITA 599

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSDPSL 337
            D G Y+C A+  L +      +TV     + D P +  +   Q+ + R +  A  D + 
Sbjct: 600 EDQGVYSCSAQTSLDSTSEKTQVTV---LGVPDPPGNLHLSERQNRSVRLSWEAGDDHNS 656

Query: 338 KLS--IVWLRGS--EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393
           K+S  IV   G+  EP  +E   R VQ  +  + ++ +  +   +Y  R     +   + 
Sbjct: 657 KISEYIVEFEGNREEPGKWEELTR-VQGEETDVVLSLAPYV---RYQFRVTAVNEVGRSH 712

Query: 394 ATLTVQ-------VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
           A+L           P + P N   +Q    K+ ++ W P+      G    YKV +W  +
Sbjct: 713 ASLPSDHHETPPAAPDKNPQNIR-VQASQPKEMIIKWEPLKSMEQNGPGLEYKV-SWKPQ 770

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGT 506
                  E IV            + P      +V A N   + P  + ++  + E  P T
Sbjct: 771 GAPEEWEEEIVTNHTLRVMTPTVYAPYD---VKVQAINQLGSSPDPQPVTLYSGEDYPST 827

Query: 507 VQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKI---KYQSVKGTKVGPLLERLPYIS 560
              ++ +  + S+   + W  +  E  +G+L GY+I   K +S+   +  P    +   S
Sbjct: 828 APVIQRVDVMNSTLVKVTWSSIPKETVHGLLRGYQINWWKTKSLLDGRTHPKEVNILRFS 887

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-YLFYVPFKNPD 606
                S  +  L+P +++ + +  Y   G G ES+ Y+F  P   P+
Sbjct: 888 G-QRNSGMVPSLDPFSEFHLTVLAYNSKGAGPESEPYIFQTPEGVPE 933



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 88/214 (41%), Gaps = 13/214 (6%)

Query: 118 IDLSVLAAPYFTVEPEFINAAE--EETVTFECKASGLPEPEIHWVHNGKPISQAPPN--P 173
           I LSV   P   V+  ++  A   +E    EC+A G PEP   W  + KP   + P    
Sbjct: 27  IPLSVQQVPTI-VKQSYVQVAFPFDEYFQIECEAKGNPEPIFSWTKDDKPFDLSDPRIIA 85

Query: 174 RRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-D 232
               G  +I  E       G Y C A+N LG    +    ++   P+  +   +   V +
Sbjct: 86  ANNSGTFKIPNEGHISHFQGKYRCFASNRLGTAVSEEIEFIVPGVPKFPKEKIEPIDVEE 145

Query: 233 GKTVVLTCR-VFGAPKPEVNWIHNQKELT--GGRYTILETGDLKITDVAFADS-GEYTCF 288
           G ++VL C    G P   + W++ + E      R  + + GDL   +V   DS  +Y CF
Sbjct: 146 GDSIVLPCNPPKGLPPLHIYWMNIELEHIEQDERVYMSQRGDLYFANVEENDSRNDYCCF 205

Query: 289 AR-NKLGT--AQGSGSLTVKEHTHITDQPEDYEV 319
           A   KL T   +    LTV    H +D     E+
Sbjct: 206 AAFPKLRTIVQKMPMKLTVNSLKHASDSSSSTEI 239


>gi|47227363|emb|CAF96912.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 786

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 172/663 (25%), Positives = 272/663 (41%), Gaps = 79/663 (11%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+P+  W +  G+P  PS ++   N    L I + +  D G+Y 
Sbjct: 88  AAKESAVKLECFALGNPVPEISWRRTSGIPF-PS-KVKMKNSNAVLEIPNFQQEDAGTYE 145

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    LS  A P++         + E  + +ECKA+G P+P   W+ NG
Sbjct: 146 CVAENRRGKNAARG-RLSFHAKPHWLQTMADTALSIEANLFWECKANGKPKPSYSWLKNG 204

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           +   Q     R ++    ++I  L  SD+G Y C A N  G +Y    + VLA  P  ++
Sbjct: 205 E---QVAAEGRIQIDNGALSIAVLNLSDSGMYQCVAENKHGIIYSSAQLMVLASPPNFSK 261

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
           +P         G  V L C+    P     W    + L    R  +L  G +KI +    
Sbjct: 262 SPLKALLKARSGSEVTLECKPEAWPPAISLWKKGNEILPRTERINLLPNGTIKIANATRQ 321

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A+N+ GTA  +G L + E T IT +P + E+  G+SA   C    DP+L +S
Sbjct: 322 DAGSYTCIAKNQFGTASTTGKLLITEPTRITMRPTNTEIIVGESAVLPCQIAFDPALDVS 381

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W    + IDF+ +     R   S    L +        G+Y C   T+++ +   A L
Sbjct: 382 FSWAFNGQLIDFQRDGNHFERVGGSVSGDLMIRNIQLSHGGKYVCLIDTDVESLSTSAIL 441

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKDGE 449
            V+ P   P   T+ ++ D+  A +SW P           GY +Q        W   D  
Sbjct: 442 VVKGPPGPPDKVTVEEITDS-TAQLSWTPGRDNG--SPITGYIIQARTPFTVGWQAVD-- 496

Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQ 508
            ++ E ++N    T T V         F RV+A N    G PS   +   T + +P T  
Sbjct: 497 -TVPE-VINGNMLTATVVGLNAWVEYEF-RVVARNAVGLGEPSPASAKTRTEDSIPDTAP 553

Query: 509 SLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQ---SVKGTKVG------------ 550
           +      G+ S   + W  V  E  NG   GY I ++    V  T+              
Sbjct: 554 TDVGGGGGTKSELVITWEPVPEELQNGEGFGYIIAFRPLGMVTWTRAAISTPGVARYVFR 613

Query: 551 --------PLLERLPYISDPTT-------------TSAKLAGLEPSTKYRIHLAGYTKAG 589
                   P   ++ Y  D T              T A + GL+ +T Y + +A +  AG
Sbjct: 614 NDTIPAFSPFEVKVVYWEDDTKPDTIGKVRISGNYTVANITGLKANTVYYLSVAAFNTAG 673

Query: 590 DGAESKYLFYV-----PFKNPDNVEGR--GSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
            G +S  +        P + P N++    GST   L + W  +  +E  +    Y +  +
Sbjct: 674 PGPQSVPINSTTKEPPPDRAPHNIQWTMIGST---LSLHWDPVVAMETESKVTGYLVLLK 730

Query: 643 RHN 645
           +++
Sbjct: 731 KNH 733



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 179/697 (25%), Positives = 283/697 (40%), Gaps = 82/697 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
           SL I  VE SD G+YTC V+N V   K  S    ++           P   V  PE + A
Sbjct: 29  SLYIAKVERSDVGNYTCVVNNTVTGDKVLSSPTPLVLRSDGVMGEYEPKIEVHFPESVPA 88

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+E  V  EC A G P PEI W   +G P    P   + K     + I N ++ D G Y 
Sbjct: 89  AKESAVKLECFALGNPVPEISWRRTSGIPF---PSKVKMKNSNAVLEIPNFQQEDAGTYE 145

Query: 197 CNATNSLGYVYKDVYVNVLA-HA-PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           C A N  G   K+     L+ HA P   +   D        +   C+  G PKP  +W+ 
Sbjct: 146 CVAENRRG---KNAARGRLSFHAKPHWLQTMADTALSIEANLFWECKANGKPKPSYSWLK 202

Query: 255 NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTV-KEHTHITDQ 313
           N +++       ++ G L I  +  +DSG Y C A NK G    S  L V     + +  
Sbjct: 203 NGEQVAAEGRIQIDNGALSIAVLNLSDSGMYQCVAENKHGIIYSSAQLMVLASPPNFSKS 262

Query: 314 PEDYEVEA--GQSATFRCNAVS-DPSLKLSIVWLRGSEPIDFESEPRFVQSN---DYSLT 367
           P    ++A  G   T  C   +  P++ L   W +G+E +     PR  + N   + ++ 
Sbjct: 263 PLKALLKARSGSEVTLECKPEAWPPAISL---WKKGNEIL-----PRTERINLLPNGTIK 314

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV----VSW 423
           +  ++  D+G YTC A+ +         L +  P       T  ++I  + AV    +++
Sbjct: 315 IANATRQDAGSYTCIAKNQFGTASTTGKLLITEPTRITMRPTNTEIIVGESAVLPCQIAF 374

Query: 424 NPVSPQSLRGHFRGYKVQTWTEKD----------GEGSIRELIVNKGESTTTEVDKFVPA 473
           +P    S    F G  +    + +          G+  IR + ++ G      +D  V  
Sbjct: 375 DPALDVSFSWAFNGQLIDFQRDGNHFERVGGSVSGDLMIRNIQLSHGGKYVCLIDTDV-E 433

Query: 474 SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV 533
           S + + +L   G   GPP ++           TV+ +       S   L W  P + NG 
Sbjct: 434 SLSTSAILVVKGP-PGPPDKV-----------TVEEIT-----DSTAQLSWT-PGRDNGS 475

Query: 534 -LMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            + GY I  Q+     VG   ++ +P + +    +A + GL    +Y   +      G G
Sbjct: 476 PITGYII--QARTPFTVGWQAVDTVPEVINGNMLTATVVGLNAWVEYEFRVVARNAVGLG 533

Query: 592 ------AESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
                 A+++    +P   P +V G G T + LVI+W  +PE   N   F Y I +R   
Sbjct: 534 EPSPASAKTRTEDSIPDTAPTDVGGGGGTKSELVITWEPVPEELQNGEGFGYIIAFRPLG 593

Query: 646 TGEAWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTT 703
               W +  +     +  V  N   P F P+E+KVV  W +     +I ++ ++ G  T 
Sbjct: 594 M-VTWTRAAISTPGVARYVFRNDTIPAFSPFEVKVVY-WEDDTKPDTIGKVRIS-GNYTV 650

Query: 704 TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 740
             +      +  +  V AFN A  GP S  I+  T E
Sbjct: 651 ANITGLKANTVYYLSVAAFNTAGPGPQSVPINSTTKE 687


>gi|327266144|ref|XP_003217866.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
           [Anolis carolinensis]
          Length = 1214

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 147/522 (28%), Positives = 231/522 (44%), Gaps = 41/522 (7%)

Query: 40  RKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           + K   ++   + L CI  G P P   W++ DGV ++   R S  NYGK L I+ V   D
Sbjct: 259 QSKVTIMKGTDLLLECIAEGLPTPHLNWARVDGVTVH---RGSIENYGKLLKIEQVTAED 315

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
            G Y C   N +GE + +   + V   P + ++PE    +   +    C+A G PEP I 
Sbjct: 316 AGIYECIARNALGETR-HEFHVGVEEPPMWVIKPESGVFSVGGSFVRLCEAVGDPEPTIK 374

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W  NG P+++   + R       I+I +L  +D+  Y C ATN  G +     ++VL   
Sbjct: 375 WKRNGVPLTETKTS-RAVFSTREISITDLVLNDSAVYQCEATNKHGTILATANIDVLEIP 433

Query: 219 PEITEAPKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDV 277
           PEI     +EY  V G    L C  F  P P+V+W    K+ +  R      G L+I + 
Sbjct: 434 PEILTPDGEEYVVVVGYPSRLYCHFFAVPLPDVSW---TKDDSMKRLDADLNGTLEIRET 490

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
              D+G YTC  +N  G    + +LTV++ T I+  P++ +V        RC++  DP L
Sbjct: 491 RKEDAGFYTCVVKNIAGRRALTATLTVRDATKISVVPKNPQVLKDHPVLLRCHSEYDPHL 550

Query: 338 K--LSIVWLRGSEPI--DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393
           K    I W +  E I  +   E R +   D +L +      D G YTC   T LD     
Sbjct: 551 KDHFQISWRKDGEEIGKNDTDEERIIMEGD-TLFIQNVELEDQGVYTCIGSTSLDTTADD 609

Query: 394 ATLTVQVPLEAPSNFTLIQVIDAKKAVVSWN-------PVSPQSLRGHFRGYKVQTWTEK 446
           + +TV    ++P +  + +  + +   +SWN       P++   +      ++ + W   
Sbjct: 610 SRITVIDVPDSPQDLYISEKRN-RSVRLSWNAGNSNNSPINEFIVEFEENRWEPRKW--- 665

Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG 505
                 RELI   G  TT  V   VP      RV++ N      PSE    + TP   P 
Sbjct: 666 ------RELIRVPGNDTTA-VLPLVPYVNYQFRVISVNAVGRSQPSETSERYETPPAAPD 718

Query: 506 TVQSLEAIPLGSSA---FYLKW--VKPEQPNGVLMGYKIKYQ 542
             ++ E I + +S      + W  +KP + NG  + YK+ ++
Sbjct: 719 --KNPENIRVETSKPHEMNMTWEPLKPMEHNGPGLEYKVNWR 758



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 146/585 (24%), Positives = 240/585 (41%), Gaps = 77/585 (13%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
            L+C F   PLP   W+KD      S +    +   +L I+     D G YTC V N  G 
Sbjct: 454  LYCHFFAVPLPDVSWTKDD-----SMKRLDADLNGTLEIRETRKEDAGFYTCVVKNIAGR 508

Query: 113  AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH----WVHNGKPISQ 168
             ++ +  L+V  A   +V P+     ++  V   C +   P  + H    W  +G+ I +
Sbjct: 509  -RALTATLTVRDATKISVVPKNPQVLKDHPVLLRCHSEYDPHLKDHFQISWRKDGEEIGK 567

Query: 169  APPNPRRKVGP-NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKD 227
               +  R +   + + I+N+   D G Y C  + SL     D  + V+    ++ ++P+D
Sbjct: 568  NDTDEERIIMEGDTLFIQNVELEDQGVYTCIGSTSLDTTADDSRITVI----DVPDSPQD 623

Query: 228  EYTVD--GKTVVLTCRVFGAPKPEVN-----WIHNQKELTGGRYTILETGDLKITDVAFA 280
             Y  +   ++V L+     +    +N     +  N+ E    R  I   G+     +   
Sbjct: 624  LYISEKRNRSVRLSWNAGNSNNSPINEFIVEFEENRWEPRKWRELIRVPGNDTTAVLPLV 683

Query: 281  D--SGEYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSATFRCN------ 330
               + ++   + N +G +Q S +    E         PE+  VE  +             
Sbjct: 684  PYVNYQFRVISVNAVGRSQPSETSERYETPPAAPDKNPENIRVETSKPHEMNMTWEPLKP 743

Query: 331  -AVSDPSLKLSIVWLRGSEPIDFESE------------PRFVQSNDYSLTVTKSSELDSG 377
               + P L+  + W R  +  ++E E            P FV    Y + V   + L SG
Sbjct: 744  MEHNGPGLEYKVNW-RQQDVAEWEEETVQKHFLVLQNTPTFVP---YDIKVQAMNNLGSG 799

Query: 378  QYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRG 437
                    E D I   ++    +P  APS+  ++QVI++  A   W+ +    +RGH +G
Sbjct: 800  -------PEPDVITGYSS--EDIPEAAPSD-VIVQVINSTLAKAIWSTIPKDRVRGHLKG 849

Query: 438  YKVQTWT------EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR----VLAFNGAY 487
            YKV  W       EK      R L+ N         D  +P    F+     V A+N   
Sbjct: 850  YKVNWWKIRSRLGEKSHRLDKRALLFNADRH-----DGMIPGLDPFSEYRLTVSAYNSKG 904

Query: 488  NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
             GP S    F TPEGVP     L+ +     +  L W  P++PNG++ GY ++YQ +  T
Sbjct: 905  TGPESLTYEFQTPEGVPEKPHFLKILNFDKDSVTLSWGPPKKPNGIITGYILQYQMINET 964

Query: 548  -KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
              +GPL E    I++P+  S +L+ L  STKY+ +    T  G G
Sbjct: 965  DDIGPLREI--NITNPSAFSFRLSNLNSSTKYKFYARACTLEGCG 1007



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 138/558 (24%), Positives = 231/558 (41%), Gaps = 59/558 (10%)

Query: 143 VTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATN 201
           +  EC A GLP P ++W   +G  + +       K+    + IE +   D G Y C A N
Sbjct: 270 LLLECIAEGLPTPHLNWARVDGVTVHRGSIENYGKL----LKIEQVTAEDAGIYECIARN 325

Query: 202 SLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG 261
           +LG    + +V V      + +     ++V G  V L C   G P+P + W  N   LT 
Sbjct: 326 ALGETRHEFHVGVEEPPMWVIKPESGVFSVGGSFVRL-CEAVGDPEPTIKWKRNGVPLTE 384

Query: 262 GRYT--ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE--HTHITDQPEDY 317
            + +  +  T ++ ITD+   DS  Y C A NK GT   + ++ V E     +T   E+Y
Sbjct: 385 TKTSRAVFSTREISITDLVLNDSAVYQCEATNKHGTILATANIDVLEIPPEILTPDGEEY 444

Query: 318 EVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSG 377
            V  G  +   C+  + P   +S  W +       +S  R     + +L + ++ + D+G
Sbjct: 445 VVVVGYPSRLYCHFFAVPLPDVS--WTKD------DSMKRLDADLNGTLEIRETRKEDAG 496

Query: 378 QYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPV---SPQSLRGH 434
            YTC  +         ATLTV+       + T I V+     V+  +PV          H
Sbjct: 497 FYTCVVKNIAGRRALTATLTVR-------DATKISVVPKNPQVLKDHPVLLRCHSEYDPH 549

Query: 435 FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAF--NGAYNGPPS 492
            + +   +W  KDGE          G++ T E    +     F + +     G Y    S
Sbjct: 550 LKDHFQISW-RKDGE--------EIGKNDTDEERIIMEGDTLFIQNVELEDQGVYTCIGS 600

Query: 493 EII------SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKG 546
             +      S +T   VP + Q L      + +  L W      N  +  + ++++    
Sbjct: 601 TSLDTTADDSRITVIDVPDSPQDLYISEKRNRSVRLSWNAGNSNNSPINEFIVEFEE--- 657

Query: 547 TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG--AESKYLF----YV 600
            +  P   R   I  P   +  +  L P   Y+  +      G    +E+   +      
Sbjct: 658 NRWEPRKWR-ELIRVPGNDTTAVLPLVPYVNYQFRVISVNAVGRSQPSETSERYETPPAA 716

Query: 601 PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ 660
           P KNP+N+    S P+ + ++W  +  +EHN P  +Y++ WR+ +  E W ++ V   ++
Sbjct: 717 PDKNPENIRVETSKPHEMNMTWEPLKPMEHNGPGLEYKVNWRQQDVAE-WEEETV---QK 772

Query: 661 SELVLANQPTFQPYEIKV 678
             LVL N PTF PY+IKV
Sbjct: 773 HFLVLQNTPTFVPYDIKV 790



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 134/586 (22%), Positives = 225/586 (38%), Gaps = 68/586 (11%)

Query: 54  FCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEA 113
            C   G P P   W ++GVP+  +         + + I  +  +D   Y CE +N  G  
Sbjct: 362 LCEAVGDPEPTIKWKRNGVPLTETKTSRAVFSTREISITDLVLNDSAVYQCEATNKHGTI 421

Query: 114 KSYSIDLSVLAAPYFTVEPEFINAAEEETVT-------FECKASGLPEPEIHWVHNGKPI 166
            + + ++ VL  P     PE +    EE V          C    +P P++ W  +    
Sbjct: 422 LA-TANIDVLEIP-----PEILTPDGEEYVVVVGYPSRLYCHFFAVPLPDVSWTKDDS-- 473

Query: 167 SQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
                  R     N  + I   RK D G Y C   N  G       + V   A +I+  P
Sbjct: 474 -----MKRLDADLNGTLEIRETRKEDAGFYTCVVKNIAGRRALTATLTV-RDATKISVVP 527

Query: 226 KDEYTVDGKTVVLTCRVFGAPKP----EVNWIHNQKEL----TGGRYTILETGDLKITDV 277
           K+   +    V+L C     P      +++W  + +E+    T     I+E   L I +V
Sbjct: 528 KNPQVLKDHPVLLRCHSEYDPHLKDHFQISWRKDGEEIGKNDTDEERIIMEGDTLFIQNV 587

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC-----NAV 332
              D G YTC     L T      +TV +   + D P+D  +   ++ + R      N+ 
Sbjct: 588 ELEDQGVYTCIGSTSLDTTADDSRITVID---VPDSPQDLYISEKRNRSVRLSWNAGNSN 644

Query: 333 SDPSLKLSIVWLRGS-EPIDFESEPRFVQSNDYSLT------VTKSSELDSGQYTCRAQT 385
           + P  +  + +     EP  +    R V  ND +        V     + S     R+Q 
Sbjct: 645 NSPINEFIVEFEENRWEPRKWRELIR-VPGNDTTAVLPLVPYVNYQFRVISVNAVGRSQP 703

Query: 386 ELDFIEAQATLTVQVPLEAPS-NFTLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
                 ++ +   + P  AP  N   I+V  +K  +  ++W P+ P    G    YKV  
Sbjct: 704 ------SETSERYETPPAAPDKNPENIRVETSKPHEMNMTWEPLKPMEHNGPGLEYKVN- 756

Query: 443 WTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 502
           W ++D      E  V K          FVP      +V A N   +GP  ++I+  + E 
Sbjct: 757 WRQQD-VAEWEEETVQKHFLVLQNTPTFVPYD---IKVQAMNNLGSGPEPDVITGYSSED 812

Query: 503 VPGTVQSLEAIPLGSSAFYLK-W--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERL--- 556
           +P    S   + + +S      W  +  ++  G L GYK+ +  ++ +++G    RL   
Sbjct: 813 IPEAAPSDVIVQVINSTLAKAIWSTIPKDRVRGHLKGYKVNWWKIR-SRLGEKSHRLDKR 871

Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYVP 601
             + +       + GL+P ++YR+ ++ Y   G G ES  Y F  P
Sbjct: 872 ALLFNADRHDGMIPGLDPFSEYRLTVSAYNSKGTGPESLTYEFQTP 917



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 113/432 (26%), Positives = 166/432 (38%), Gaps = 53/432 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPIN---PSDRISQGNYGKSLIIKHVEFSD-QGSYTCEVSNGV 110
           C   G P P   W+KDG P +    S  I+  N G  ++      S  QG Y C  SN +
Sbjct: 55  CEAKGNPRPIFNWTKDGKPFDLQHDSRIIASSNSGTFVVKNRGNISSFQGKYRCYASNEL 114

Query: 111 GEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKA-SGLPEPEIHWVHNGKPISQ 168
           G A S  I + V   P F  E    I+    + +   C    G+P   I+W++    +  
Sbjct: 115 GSAMSEEIAVVVPGIPKFPKEKIGPIDVEHGDAMVLRCNPPKGIPPLRIYWMNIA--LQH 172

Query: 169 APPNPRRKVG-PNRITIENLRKSDT-GNYGCNAT-----------NSLGYVYKDVYVNVL 215
            P + R  +     +   N+ ++D+  +Y C A+                V +  Y N  
Sbjct: 173 IPQDERVSMSLKGDLFFANVDENDSRSDYCCFASFPRLRTIVQKMPMTLTVTRSKYTNDS 232

Query: 216 AHA-----------------PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE 258
           + +                 PE ++       + G  ++L C   G P P +NW      
Sbjct: 233 SSSSDPKANLFKERKPKLVIPESSDRQSKVTIMKGTDLLLECIAEGLPTPHLNWARVDG- 291

Query: 259 LTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDY 317
           +T  R +I   G  LKI  V   D+G Y C ARN LG  +    + V+E      +PE  
Sbjct: 292 VTVHRGSIENYGKLLKIEQVTAEDAGIYECIARNALGETRHEFHVGVEEPPMWVIKPESG 351

Query: 318 EVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSG 377
               G S    C AV DP  + +I W R   P+      R V S    +++T     DS 
Sbjct: 352 VFSVGGSFVRLCEAVGDP--EPTIKWKRNGVPLTETKTSRAVFST-REISITDLVLNDSA 408

Query: 378 QYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRG 437
            Y C A  +   I A A + V   LE P     I   D ++ VV      P  L  HF  
Sbjct: 409 VYQCEATNKHGTILATANIDV---LEIPPE---ILTPDGEEYVVVVG--YPSRLYCHFFA 460

Query: 438 YKVQ--TWTEKD 447
             +   +WT+ D
Sbjct: 461 VPLPDVSWTKDD 472



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 81/193 (41%), Gaps = 23/193 (11%)

Query: 113 AKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQ--- 168
           A +  I LSV   P  T +  + +    +E  T +C+A G P P  +W  +GKP      
Sbjct: 20  AGAIEIPLSVRQLPTITAQSTDEVAFPFDEEFTIKCEAKGNPRPIFNWTKDGKPFDLQHD 79

Query: 169 ----APPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
               A  N    V  NR  I + +    G Y C A+N LG    +    V+   P I + 
Sbjct: 80  SRIIASSNSGTFVVKNRGNISSFQ----GKYRCYASNELGSAMSEEIAVVV---PGIPKF 132

Query: 225 PKDEY-TVD---GKTVVLTCR-VFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDV 277
           PK++   +D   G  +VL C    G P   + W  I  Q      R ++   GDL   +V
Sbjct: 133 PKEKIGPIDVEHGDAMVLRCNPPKGIPPLRIYWMNIALQHIPQDERVSMSLKGDLFFANV 192

Query: 278 AFADS-GEYTCFA 289
              DS  +Y CFA
Sbjct: 193 DENDSRSDYCCFA 205


>gi|380704248|gb|AFD97012.1| PTPRFa.2 [Danio rerio]
          Length = 1792

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 178/687 (25%), Positives = 274/687 (39%), Gaps = 72/687 (10%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVE-FSDQGSYTCEVS 107
             C   G P P+  W K G  ++ S R     +    G  L I+ +    D+  Y C  +
Sbjct: 53  FVCQAVGEPKPRITWMKKGKKVS-SQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTAT 111

Query: 108 NGVGEAKSYSIDLSVL-------AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV 160
           N VGE  + S  L+VL         P   + P+        T T  C ASG P+PEI W 
Sbjct: 112 NSVGEINT-SAKLTVLEEDQIPHGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEISWF 170

Query: 161 HNGKPISQAPPNPR-RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYK---DVYVNVLA 216
            +  P+     N R +++    + IEN  +SD G Y C A NS G  Y    ++YV V  
Sbjct: 171 KDFLPVDINSSNGRIKQLRSGALQIENSEESDQGKYECVAVNSAGTRYSAPANLYVRVRR 230

Query: 217 HAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITD 276
             P  +  P +   + G +V LTC   GAP P V W+  ++ELT      +    L++T+
Sbjct: 231 VPPRFSIPPTNHEVMPGGSVNLTCVAVGAPMPYVKWMKGEQELTKEEEMPIGRNVLELTN 290

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEV--EAGQSATFRCNAVSD 334
           +    SG YTC A + LG    +  +TVK    +   P    V      S T   ++ + 
Sbjct: 291 I--RQSGNYTCVAISSLGMIDTTAQITVKA---LPRPPASLIVTETTATSVTLTWDSGNP 345

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
             +   ++  R     +   E   V S  YS  +   S     ++   A   +       
Sbjct: 346 EPVSYYVIQYRSKISDNGFQEVDGVASTRYS--IGGLSPYSEYEFRVMAVNNIGRGPPSG 403

Query: 395 TLTVQVPLEAPSNFTL---IQVIDAKKAVVSWNPVSPQSLRGHFRGYKV----------Q 441
            +  +   +APS+  L    +++ A   +V W P  P+   G  RGY+V           
Sbjct: 404 MVETRTSEQAPSSPPLRVQARMLSATTMLVQWEP--PEEPNGQIRGYRVYYTSDLHFPLS 461

Query: 442 TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           TW + + E           +S+ T +   VP      RVLAF    +GPPS+I+   T +
Sbjct: 462 TWQKHNTE-----------DSSLTTISGLVPDITYGLRVLAFTSVGDGPPSDILQVKTQQ 510

Query: 502 GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
           GVP      EA     +   L W+ P Q    +  Y++ Y             +   I D
Sbjct: 511 GVPAQPTGFEAEAELDTRIMLSWLWPVQDQ--ITKYELTYWEADSDN------KHHVIFD 562

Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA-----ESKYLFYVPFKNPDNVEGRGSTPN 616
           P  + A +  L+P T Y+  LA  ++ G G      E++    VP   P  VE       
Sbjct: 563 PAGSYA-IDSLKPDTLYKFSLAARSEMGLGVYTQPIEARTAQSVPGAPPRRVEVDNINST 621

Query: 617 NLVISWTAMPEIEHNAPHFK-YRIFWRRHNTGEAWNQDDVLDW---RQSELVLANQPTFQ 672
            L +SW   P  +    H + Y++ + R   GE   Q  +LD       E V++      
Sbjct: 622 ALRVSWKP-PLQQKQHGHIRGYQVVYSRLENGEPRGQPIILDVALPEAQEAVISGLLPET 680

Query: 673 PYEIKVVQTWTEKDGEGSIRELIVNKG 699
            Y + V    T+ DG  S  +++   G
Sbjct: 681 TYSVTVAAYTTKGDGARSKAKVVTTTG 707



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 138/524 (26%), Positives = 225/524 (42%), Gaps = 57/524 (10%)

Query: 132 PEFINAAEEET------VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV------GP 179
           P F+   E++T       +F C+A G P+P I W+  GK +S    + R +V        
Sbjct: 34  PSFVKTPEDQTGISGGVASFVCQAVGEPKPRITWMKKGKKVS----SQRFEVIEFDDGSG 89

Query: 180 NRITIENLR-KSDTGNYGCNATNSLGYVYKDVYVNVLAHA------PEITEAPKDEYTVD 232
           + + I+ LR   D   Y C ATNS+G +     + VL         P I   P+ +    
Sbjct: 90  SVLRIQPLRTHRDEAIYECTATNSVGEINTSAKLTVLEEDQIPHGFPTIDMGPQLKVVER 149

Query: 233 GKTVVLTCRVFGAPKPEVNWIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCF 288
            +T  + C   G P PE++W  +   +    + GR   L +G L+I +   +D G+Y C 
Sbjct: 150 TRTATMLCAASGNPDPEISWFKDFLPVDINSSNGRIKQLRSGALQIENSEESDQGKYECV 209

Query: 289 ARNKLGTAQGS-GSLTVKEHT---HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWL 344
           A N  GT   +  +L V+        +  P ++EV  G S    C AV  P     + W+
Sbjct: 210 AVNSAGTRYSAPANLYVRVRRVPPRFSIPPTNHEVMPGGSVNLTCVAVGAP--MPYVKWM 267

Query: 345 RGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEA 404
           +G + +  E E   +  N   LT  +     SG YTC A + L  I+  A +TV+     
Sbjct: 268 KGEQELTKEEE-MPIGRNVLELTNIRQ----SGNYTCVAISSLGMIDTTAQITVKALPRP 322

Query: 405 PSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTT 464
           P++  + +   A    ++W+  +P+ +      Y V  +  K  +   +E  V+   ST 
Sbjct: 323 PASLIVTETT-ATSVTLTWDSGNPEPV-----SYYVIQYRSKISDNGFQE--VDGVASTR 374

Query: 465 TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGT-VQSLEAIPLGSSAFYLK 523
             +    P S+   RV+A N    GPPS ++   T E  P +    ++A  L ++   ++
Sbjct: 375 YSIGGLSPYSEYEFRVMAVNNIGRGPPSGMVETRTSEQAPSSPPLRVQARMLSATTMLVQ 434

Query: 524 WVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
           W  PE+PNG + GY++ Y S     +    +     S  TT    ++GL P   Y + + 
Sbjct: 435 WEPPEEPNGQIRGYRVYYTSDLHFPLSTWQKHNTEDSSLTT----ISGLVPDITYGLRVL 490

Query: 584 GYTKAGDGAESKYLFY-----VPFKNPDNVEGRGSTPNNLVISW 622
            +T  GDG  S  L       VP   P   E        +++SW
Sbjct: 491 AFTSVGDGPPSDILQVKTQQGVP-AQPTGFEAEAELDTRIMLSW 533



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 155/738 (21%), Positives = 268/738 (36%), Gaps = 95/738 (12%)

Query: 15  ILLNVIATGISASQN-----RHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK 69
           + +N   T  SA  N     R  P +  +       +    V L C+  G P+P   W K
Sbjct: 209 VAVNSAGTRYSAPANLYVRVRRVPPRFSIPPTNHEVMPGGSVNLTCVAVGAPMPYVKWMK 268

Query: 70  DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-IDLSVLAAPYF 128
               +   + +  G      +++       G+YTC   + +G   + + I +  L  P  
Sbjct: 269 GEQELTKEEEMPIGRN----VLELTNIRQSGNYTCVAISSLGMIDTTAQITVKALPRPPA 324

Query: 129 TVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLR 188
           ++    +      +VT     SG PEP  ++V             R K+  N    + + 
Sbjct: 325 SL---IVTETTATSVTLTWD-SGNPEPVSYYVIQY----------RSKISDN--GFQEVD 368

Query: 189 KSDTGNYGCNATNSLG-YVYKDVYVNVLAHAPE--ITEAPKDEYTVDGKTVVLTCRVFGA 245
              +  Y     +    Y ++ + VN +   P   + E    E       + +  R+  A
Sbjct: 369 GVASTRYSIGGLSPYSEYEFRVMAVNNIGRGPPSGMVETRTSEQAPSSPPLRVQARMLSA 428

Query: 246 PKPEVNWIHNQKELTGGR---YTILETGDLK----------------------ITDVAFA 280
               V W     E   G+   Y +  T DL                       + D+ + 
Sbjct: 429 TTMLVQW--EPPEEPNGQIRGYRVYYTSDLHFPLSTWQKHNTEDSSLTTISGLVPDITYG 486

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN---AVSDPSL 337
                   A   +G    S  L VK    +  QP  +E EA        +    V D   
Sbjct: 487 ----LRVLAFTSVGDGPPSDILQVKTQQGVPAQPTGFEAEAELDTRIMLSWLWPVQDQIT 542

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF----IEAQ 393
           K  + +       D +    F  +  Y++   K   L       R++  L      IEA+
Sbjct: 543 KYELTYWEADS--DNKHHVIFDPAGSYAIDSLKPDTLYKFSLAARSEMGLGVYTQPIEAR 600

Query: 394 ATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
              T Q    AP     +  I++    VSW P   Q   GH RGY+V     ++GE   +
Sbjct: 601 ---TAQSVPGAPPRRVEVDNINSTALRVSWKPPLQQKQHGHIRGYQVVYSRLENGEPRGQ 657

Query: 454 ELIVNKG--ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLE 511
            +I++    E+    +   +P +     V A+    +G  S+     T   VPG    + 
Sbjct: 658 PIILDVALPEAQEAVISGLLPETTYSVTVAAYTTKGDGARSKAKVVTTTGAVPGKPTMII 717

Query: 512 AIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD--PTTTSAKL 569
           +  +G++A  ++W  P++  G LMGY+++Y+  +        E +  + D   T     +
Sbjct: 718 STTIGNTAL-IQWQPPKEMVGELMGYRLRYKREE--------EDIYTVRDFRRTDDHFTV 768

Query: 570 AGLEPSTKYRIHLAGYTKAGDGAE-SKYLFY---VPFKNPDNVEGRGSTPNNLVISWTAM 625
            GL     Y   L    +AG+G E SK +     VP   P N++  G T     ++W   
Sbjct: 769 TGLHKGATYIFKLCAKNRAGNGEEYSKEISTPEDVPSSYPQNLKVVGLTTTTTKLAWDPP 828

Query: 626 PEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEK 685
           P  E N    +Y + +R  N+    +Q+       +E+ +        Y+I+ V+ +T K
Sbjct: 829 PLPERNGKIVRYVVVYRDINS----HQNQTNGTADTEMTIQGLKPDTTYDIR-VRAFTGK 883

Query: 686 DGEGSIRELIVNKGESTT 703
            G G I   I ++  ST+
Sbjct: 884 GG-GPISPSIQSRTMSTS 900


>gi|348575283|ref|XP_003473419.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
           [Cavia porcellus]
          Length = 1152

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 151/600 (25%), Positives = 256/600 (42%), Gaps = 53/600 (8%)

Query: 44  VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           V L+ + + L C   G P PQ  W+K G  + P    ++ N+G +L I+++   D+G+Y 
Sbjct: 267 VILKGETLMLECFAEGLPTPQVEWNKLGDDL-PKRSETKENHGNTLKIENISHRDKGNYR 325

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C  SN +G A S+   + V   P +T +PE    +   +    C+A G+P+P I W  NG
Sbjct: 326 CTASNFLGTA-SHDFHVIVEEPPRWTKKPESAVYSTGSSGILLCEADGVPQPTIQWKING 384

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P           V P  I+  NL  + T  Y C A+N  G +  +  ++V+   P I  
Sbjct: 385 FPADNHL-FAGDVVFPREISFTNLHPNHTAVYQCEASNVHGTILANANIDVIDVIPLIQT 443

Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFA 280
             ++ Y TV G +  L C  F +P+  V W  +   + L GGRY I   G L+IT     
Sbjct: 444 KDEENYATVIGHSAFLHCEYFASPEAVVTWQRMDEAQPLEGGRYRIHNNGTLEITRTTEE 503

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK-- 338
           D+G Y+C+  N +G      +L ++  T +   P++  V         C +  D  L+  
Sbjct: 504 DAGSYSCWVENAIGKTAVIANLDIRNATKLRVSPKNPRVSKSHMLELYCESKCDSHLQHS 563

Query: 339 LSIVWLRGSEPIDFE---SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
           L + W +  E  DFE   +E   +  +  +LT++  +  D G Y+C A T LD I     
Sbjct: 564 LKLSWSKDGE--DFEINGTEDGRIVIDGANLTISNVTLEDHGIYSCLAHTALDSIAEITQ 621

Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIREL 455
           +TV    + P N  L +  + +   +SW   +      +   Y V+    ++  G   EL
Sbjct: 622 VTVLDVPDPPENLHLSERHN-RSVRLSWE--AGDDHNSNITEYIVEFEGNREDPGRWEEL 678

Query: 456 IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-IISFVTPEGVPG-TVQSLEAI 513
              +G++TT  + +  P  +   RV+A N      PS+  +   TP   P    Q++   
Sbjct: 679 TRVQGKATTVLL-RLAPYVRYQFRVIAVNEVGKSRPSQPSVHHQTPPAAPDKNPQNIRVQ 737

Query: 514 PLGSSAFYLKW---------------------------VKPEQPNGVLMGYKIKYQSVKG 546
                   +KW                           +  ++ +G L GY+I +   K 
Sbjct: 738 ASQPKEMIIKWEVHPDTAPVVVSVDIINSTLVKVTWSTIPKDRVHGHLKGYQINWWKTKS 797

Query: 547 TKVGPLLERLPYISDPTTTSAKLAGLEPS----TKYRIHLAGYTKAGDGAESK-YLFYVP 601
              G +  +   ++    +  +  G+ PS    +++ + +  Y   G G ES+ Y+F  P
Sbjct: 798 LLDGRIHPK--EVNILRFSGQRNYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTP 855



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 140/597 (23%), Positives = 242/597 (40%), Gaps = 75/597 (12%)

Query: 53  LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
           L C   G P P   W  +G P +         + + +   ++  +    Y CE SN  G 
Sbjct: 366 LLCEADGVPQPTIQWKINGFPADNHLFAGDVVFPREISFTNLHPNHTAVYQCEASNVHGT 425

Query: 113 -AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
              + +ID+  +     T + E        +    C+    PE  + W    + + +A P
Sbjct: 426 ILANANIDVIDVIPLIQTKDEENYATVIGHSAFLHCEYFASPEAVVTW----QRMDEAQP 481

Query: 172 --NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPEITEAPKD 227
               R ++  N  + I    + D G+Y C   N++G     V  N+ + +A ++  +PK+
Sbjct: 482 LEGGRYRIHNNGTLEITRTTEEDAGSYSCWVENAIGKTA--VIANLDIRNATKLRVSPKN 539

Query: 228 EYTVDGKTVVLTCRVFGAPKPEVNWIHNQK----------ELTG---GRYTILETGDLKI 274
                   + L C      K + +  H+ K          E+ G   GR  +++  +L I
Sbjct: 540 PRVSKSHMLELYCE----SKCDSHLQHSLKLSWSKDGEDFEINGTEDGR-IVIDGANLTI 594

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AV 332
           ++V   D G Y+C A   L +      +TV +   + D PE+  +    + + R +  A 
Sbjct: 595 SNVTLEDHGIYSCLAHTALDSIAEITQVTVLD---VPDPPENLHLSERHNRSVRLSWEAG 651

Query: 333 SDPSLKLS--IVWLRGS--EPIDFESEPR--------------FVQSNDYSLTVTKSSEL 374
            D +  ++  IV   G+  +P  +E   R              +V+     + V +  + 
Sbjct: 652 DDHNSNITEYIVEFEGNREDPGRWEELTRVQGKATTVLLRLAPYVRYQFRVIAVNEVGKS 711

Query: 375 DSGQYTCRAQT-------ELDFIEAQATLTVQV-------PLEAPSNFTLIQVIDAKKAV 420
              Q +   QT           I  QA+   ++       P  AP   + + +I++    
Sbjct: 712 RPSQPSVHHQTPPAAPDKNPQNIRVQASQPKEMIIKWEVHPDTAPVVVS-VDIINSTLVK 770

Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDG-EGSIRELIVNKGESTTTEVDKFVPASKNFAR 479
           V+W+ +    + GH +GY++  W  K   +G I    VN    +       VP+   F+ 
Sbjct: 771 VTWSTIPKDRVHGHLKGYQINWWKTKSLLDGRIHPKEVNILRFSGQRNYGMVPSLDAFSE 830

Query: 480 ----VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
               VLA+N    GP SE   F TPEGVP     L+ I +      L W +P + NG L 
Sbjct: 831 FHLTVLAYNSKGAGPESEPYIFQTPEGVPEQPSFLKVIKVDKDTATLSWNRPMKLNGNLT 890

Query: 536 GYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
           GY ++YQ +  T ++G L E    I+ P+ +S  L+ L  +TKY+ +L   T  G G
Sbjct: 891 GYLLQYQIINDTDEIGDLNEI--NITTPSKSSWHLSNLNATTKYKFYLRACTSKGCG 945



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 143/355 (40%), Gaps = 48/355 (13%)

Query: 32  APKQQYVTRKKEVALR---NKKVELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYG 86
            P+   +T++ +V +    ++  ++ C   G P P   W+KD  P + S    I+  N G
Sbjct: 31  VPQVPTITKQSKVQVAFPFDEYFQIECEAKGNPEPVFSWTKDDKPFDLSGAPIIASNNSG 90

Query: 87  KSLIIKHVEFSD-QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVT 144
              I      S  QG Y C  SN +G A S  I+  V + P F  E  E ++  E + + 
Sbjct: 91  TFKIPNEGHISHFQGKYRCFASNKLGVAMSEEIEFIVPSVPKFPKEKIEPLDVEEGDPIV 150

Query: 145 FECK-ASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNA-- 199
            +C    GLP   I+W++   + I Q       + G   +   N+ + D+ N Y C A  
Sbjct: 151 LQCNPPKGLPPLHIYWMNIELEHIEQDKRVYMSQKG--DLYFANVEEKDSRNDYCCFAAF 208

Query: 200 ---------------TNSLGYV---------------YKDVYVNVLAHAPEITEAPKDEY 229
                           NSL +V                K     +L   PE T +     
Sbjct: 209 PRLRTIVQKMPMKLTVNSLKHVNDSRSSTEISSKANSIKQRKPRLLLPPPE-TGSESAVV 267

Query: 230 TVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD-LKITDVAFADSGEYTCF 288
            + G+T++L C   G P P+V W     +L     T    G+ LKI +++  D G Y C 
Sbjct: 268 ILKGETLMLECFAEGLPTPQVEWNKLGDDLPKRSETKENHGNTLKIENISHRDKGNYRCT 327

Query: 289 ARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA--VSDPSLKLSI 341
           A N LGTA     + V+E    T +PE      G S    C A  V  P+++  I
Sbjct: 328 ASNFLGTASHDFHVIVEEPPRWTKKPESAVYSTGSSGILLCEADGVPQPTIQWKI 382



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 123/332 (37%), Gaps = 48/332 (14%)

Query: 118 IDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPEPEIHWVHNGKP--ISQAPPNPR 174
           I LSV   P  T + +  +    +E    EC+A G PEP   W  + KP  +S AP    
Sbjct: 27  IPLSVPQVPTITKQSKVQVAFPFDEYFQIECEAKGNPEPVFSWTKDDKPFDLSGAPIIAS 86

Query: 175 RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
              G  +I  E       G Y C A+N LG    +    ++   P+  +   +   V +G
Sbjct: 87  NNSGTFKIPNEGHISHFQGKYRCFASNKLGVAMSEEIEFIVPSVPKFPKEKIEPLDVEEG 146

Query: 234 KTVVLTCR-VFGAPKPEVNWIHNQKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA 289
             +VL C    G P   + W++ + E      R  + + GDL   +V   DS  +Y CFA
Sbjct: 147 DPIVLQCNPPKGLPPLHIYWMNIELEHIEQDKRVYMSQKGDLYFANVEEKDSRNDYCCFA 206

Query: 290 ---RNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA------------------------- 321
              R +    +    LTV    H+ D     E+ +                         
Sbjct: 207 AFPRLRTIVQKMPMKLTVNSLKHVNDSRSSTEISSKANSIKQRKPRLLLPPPETGSESAV 266

Query: 322 ----GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSG 377
               G++    C A   P+ ++   W +  + +   SE +    N  +L +   S  D G
Sbjct: 267 VILKGETLMLECFAEGLPTPQVE--WNKLGDDLPKRSETKENHGN--TLKIENISHRDKG 322

Query: 378 QYTCRAQTELDFIEAQATLTVQVPLEAPSNFT 409
            Y C A   L      A+    V +E P  +T
Sbjct: 323 NYRCTASNFL----GTASHDFHVIVEEPPRWT 350


>gi|344276488|ref|XP_003410040.1| PREDICTED: contactin-6 [Loxodonta africana]
          Length = 1016

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 181/719 (25%), Positives = 300/719 (41%), Gaps = 84/719 (11%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKS---LIIKHVEFSDQGS 101
           A ++  ++L C   G P+P   W +    + P     +  Y KS   L I + +  D+G 
Sbjct: 227 AAKDSSIKLECFALGNPVPNISWRRMDGSLLPG----KVKYSKSKAILEIPNFQQEDEGF 282

Query: 102 YTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVH 161
           Y C   N  G   +    L   A P +  + +    +  +++ +ECKASG P P   W+ 
Sbjct: 283 YECTAGNLRGRNIAKG-QLIFYAPPEWEQKIQNTYLSIYDSLFWECKASGKPSPYYTWLK 341

Query: 162 NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           NG+ ++   P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP  
Sbjct: 342 NGERLN---PEERIQIENGTLIITMLNVSDSGIYQCAAENKYQIIYANAELKVLASAPNF 398

Query: 222 TEAPKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVA 278
           ++ P  + +V   G  + + C+    P+  V+W    + L    R  ++E G LKI +V 
Sbjct: 399 SKNPIKKVSVVQVGGDISIECKPIAFPRAAVSWKRGTENLRQSKRVFLIEDGSLKIYNVT 458

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            +D+G YTC A N+ G A+ +GSL VKE T IT  P   +V  G+S    C    DPS++
Sbjct: 459 RSDAGSYTCIATNQFGVAKSTGSLVVKERTVITIPPSKMDVTVGESIVLPCQVSHDPSIE 518

Query: 339 LSIVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           +  VW    + ID +       R    +   L +       SG+Y C  QT L+ + A A
Sbjct: 519 VVFVWSFNGDIIDLKKGVTHFERIGGESAGDLMIRNIQLNHSGKYMCTVQTTLEILSAVA 578

Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEG 450
            + V+ P   P +   ++ I +  + +SW P  P +     + + +QT T          
Sbjct: 579 DIIVRGPPGPPEDVR-VEHISSSTSQLSWRP-GPDN-NSPIQIFTIQTRTPFSLGWQAVS 635

Query: 451 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE---------IISFVTPE 501
           ++ E++   G++    V    P  +   RV+A N    G PS+          +  V P 
Sbjct: 636 TVPEIL--NGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPT 693

Query: 502 GVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
            + G   S        S   + W  +  E  NG   GY + ++ V  T      ER+  +
Sbjct: 694 NINGGGGS-------RSELVITWESIPEELQNGEGFGYIVMFRPVGSTTWTK--ERVLSV 744

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLV 619
            + +    +   + P + + + +  Y   G+G+ S        ++   +  RG++  +  
Sbjct: 745 -ESSRFIYRNESIIPLSPFEVKVGVYNNEGEGSLSTASIVYSGEDEPRMAPRGTSVQS-- 801

Query: 620 ISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVV 679
           +S + M E+  NA      I W R NTG                          YE   V
Sbjct: 802 VSASEM-EVSWNA------IDWNR-NTGRVLG----------------------YE---V 828

Query: 680 QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
             WT+   E  I ++ V+ G  T   +      +  FA V A+N A  GP S  ++  T
Sbjct: 829 LYWTDDSKESMIGKIRVS-GNVTVKNITGLKANTLYFASVRAYNTAGTGPSSTPVNVTT 886



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 159/659 (24%), Positives = 256/659 (38%), Gaps = 85/659 (12%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC ++N   EA+      SV   P   V+                
Sbjct: 168 NLYIAKVEPSDVGNYTCFITN--KEAQR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 220

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
            PE I AA++ ++  EC A G P P I W       S  P   +       + I N ++ 
Sbjct: 221 FPETIQAAKDSSIKLECFALGNPVPNISWRRMDG--SLLPGKVKYSKSKAILEIPNFQQE 278

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
           D G Y C A N  G       + +    PE  +  ++ Y     ++   C+  G P P  
Sbjct: 279 DEGFYECTAGNLRGRNIAKGQL-IFYAPPEWEQKIQNTYLSIYDSLFWECKASGKPSPYY 337

Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-H 309
            W+ N + L       +E G L IT +  +DSG Y C A NK      +  L V     +
Sbjct: 338 TWLKNGERLNPEERIQIENGTLIITMLNVSDSGIYQCAAENKYQIIYANAELKVLASAPN 397

Query: 310 ITDQP--EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            +  P  +   V+ G   +  C  ++ P  + ++ W RG+E  +     R     D SL 
Sbjct: 398 FSKNPIKKVSVVQVGGDISIECKPIAFP--RAAVSWKRGTE--NLRQSKRVFLIEDGSLK 453

Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV------- 420
           +   +  D+G YTC A  +    ++  +L V+         T+I +  +K  V       
Sbjct: 454 IYNVTRSDAGSYTCIATNQFGVAKSTGSLVVK-------ERTVITIPPSKMDVTVGESIV 506

Query: 421 ----VSWNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKFV 471
               VS +P         F G  +      T  E+ G  S  +L++   +       K++
Sbjct: 507 LPCQVSHDPSIEVVFVWSFNGDIIDLKKGVTHFERIGGESAGDLMIRNIQ--LNHSGKYM 564

Query: 472 PASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPN 531
              +    +L+            ++ +   G PG  + +    + SS   L W      N
Sbjct: 565 CTVQTTLEILS-----------AVADIIVRGPPGPPEDVRVEHISSSTSQLSWRPGPDNN 613

Query: 532 GVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGD 590
             +  + I  Q+     +G   +  +P I +  T +A + GL P  +Y   +      G 
Sbjct: 614 SPIQIFTI--QTRTPFSLGWQAVSTVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGI 671

Query: 591 GAESK------YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           G  SK          VP   P N+ G G + + LVI+W ++PE   N   F Y + +R  
Sbjct: 672 GEPSKPSELLRTKASVPVVAPTNINGGGGSRSELVITWESIPEELQNGEGFGYIVMFRPV 731

Query: 645 NTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
            +   W ++ VL    S  +  N+      P+E+KV       +GEGS+    IV  GE
Sbjct: 732 GS-TTWTKERVLSVESSRFIYRNESIIPLSPFEVKV--GVYNNEGEGSLSTASIVYSGE 787



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 151/642 (23%), Positives = 243/642 (37%), Gaps = 87/642 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +NP +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 327 CKASGKPSPYYTWLKNGERLNPEERIQIEN--GTLIITMLNVSDSGIYQCAAENKY-QII 383

Query: 115 SYSIDLSVLA-APYFTVEP----EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
             + +L VLA AP F+  P      +    +  ++ ECK    P   + W    + + Q+
Sbjct: 384 YANAELKVLASAPNFSKNPIKKVSVVQVGGD--ISIECKPIAFPRAAVSWKRGTENLRQS 441

Query: 170 PPNPRR--KVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKD 227
               +R   +    + I N+ +SD G+Y C ATN  G V K     V+     IT  P  
Sbjct: 442 ----KRVFLIEDGSLKIYNVTRSDAGSYTCIATNQFG-VAKSTGSLVVKERTVITIPPSK 496

Query: 228 EYTVDGKTVVLTCRVFGAPKPEVN--WIHN-----------QKELTGGRYTILETGDLKI 274
                G+++VL C+V   P  EV   W  N             E  GG       GDL I
Sbjct: 497 MDVTVGESIVLPCQVSHDPSIEVVFVWSFNGDIIDLKKGVTHFERIGGE----SAGDLMI 552

Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
            ++    SG+Y C  +  L        + V+        PED  VE   S+T + +    
Sbjct: 553 RNIQLNHSGKYMCTVQTTLEILSAVADIIVRGPP---GPPEDVRVEHISSSTSQLSWRPG 609

Query: 335 P--SLKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
           P  +  + I  ++   P         + P  +    Y+ TV   S     ++   A   +
Sbjct: 610 PDNNSPIQIFTIQTRTPFSLGWQAVSTVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSI 669

Query: 388 DFIEAQA-----TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ- 441
              E             VP+ AP+N          + V++W  +  +   G   GY V  
Sbjct: 670 GIGEPSKPSELLRTKASVPVVAPTNINGGGG-SRSELVITWESIPEELQNGEGFGYIVMF 728

Query: 442 ------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
                 TWT++          + + ES        +P S    +V  +N    G  S   
Sbjct: 729 RPVGSTTWTKERVLSVESSRFIYRNES-------IIPLSPFEVKVGVYNNEGEGSLSTAS 781

Query: 496 SFVTPEGVP-----GT-VQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGT 547
              + E  P     GT VQS+ A  +  S   + W    +  G ++GY++ Y     K +
Sbjct: 782 IVYSGEDEPRMAPRGTSVQSVSASEMEVSWNAIDW---NRNTGRVLGYEVLYWTDDSKES 838

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PF 602
            +G +            T   + GL+ +T Y   +  Y  AG G  S  +        P 
Sbjct: 839 MIGKIR------VSGNVTVKNITGLKANTLYFASVRAYNTAGTGPSSTPVNVTTKKSPPS 892

Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           + P N+  +  T + L ++W  +  +E+ +    Y+I +R++
Sbjct: 893 QPPANIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQN 933



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 117/492 (23%), Positives = 183/492 (37%), Gaps = 74/492 (15%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVSN 108
           ++ L C   G PLPQ  W ++   I+ +        G SL I     + D G+Y C  +N
Sbjct: 33  EIILNCAAHGYPLPQYRWKQNDTDIDFTMSYHYRLDGGSLAISSPPTAQDIGTYQCLATN 92

Query: 109 GVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPEI-----HWVHN 162
            +G   S    L       F T     ++  E + V   C     P P +      W  N
Sbjct: 93  PLGTILSRKAKLQFAYIEEFETKTRSTVSVREGQGVVLLCG----PPPHVGDLSYAWTFN 148

Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY--------------- 205
             P+     N RR V      + I  +  SD GNY C  TN                   
Sbjct: 149 DNPLYVQEDN-RRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPPTPLVQRTD 207

Query: 206 -VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRY 264
            V  +    +    PE  +A KD       ++ L C   G P P ++W      L  G+ 
Sbjct: 208 GVMGEYEPKIEVRFPETIQAAKD------SSIKLECFALGNPVPNISWRRMDGSLLPGKV 261

Query: 265 TILET-GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQ 323
              ++   L+I +    D G Y C A N  G     G L          + ++  +    
Sbjct: 262 KYSKSKAILEIPNFQQEDEGFYECTAGNLRGRNIAKGQLIFYAPPEWEQKIQNTYLSIYD 321

Query: 324 SATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           S  + C A   PS   +  WL+  E ++ E     +Q  + +L +T  +  DSG Y C A
Sbjct: 322 SLFWECKASGKPSPYYT--WLKNGERLNPEER---IQIENGTLIITMLNVSDSGIYQCAA 376

Query: 384 QTELDFIEAQATLTVQVPLEAPSNF--------TLIQV-----IDAK-----KAVVSWNP 425
           + +   I A A L V   L +  NF        +++QV     I+ K     +A VSW  
Sbjct: 377 ENKYQIIYANAELKV---LASAPNFSKNPIKKVSVVQVGGDISIECKPIAFPRAAVSWKR 433

Query: 426 VSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK---GESTTTEVDKFVPASKNFARVLA 482
              ++LR   R + ++       +GS++   V +   G  T    ++F  A    + V+ 
Sbjct: 434 -GTENLRQSKRVFLIE-------DGSLKIYNVTRSDAGSYTCIATNQFGVAKSTGSLVVK 485

Query: 483 FNGAYNGPPSEI 494
                  PPS++
Sbjct: 486 ERTVITIPPSKM 497



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 106/286 (37%), Gaps = 32/286 (11%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L+ P F  EP+   F   + E  +   C A G P P+  W  N   I        R  G
Sbjct: 10  LLSRPIFIQEPQDVIFPLDSSESEIILNCAAHGYPLPQYRWKQNDTDIDFTMSYHYRLDG 69

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            +          D G Y C ATN LG +         A+  E     +   +V +G+ VV
Sbjct: 70  GSLAISSPPTAQDIGTYQCLATNPLGTILSRKAKLQFAYIEEFETKTRSTVSVREGQGVV 129

Query: 238 LTCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P V      W  N   L       R+   ETG+L I  V  +D G YTCF
Sbjct: 130 LLC----GPPPHVGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCF 185

Query: 289 ARNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSL 337
             NK    + QG  +  V+    +  +         PE  +     S    C A+ +P  
Sbjct: 186 ITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSIKLECFALGNPVP 245

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            +S   + GS       + ++ +S    L +    + D G Y C A
Sbjct: 246 NISWRRMDGSL---LPGKVKYSKSKAI-LEIPNFQQEDEGFYECTA 287



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 15/198 (7%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
           P  AP   T +Q + A +  VSWN +      G   GY+V  WT+   E  I ++ V+ G
Sbjct: 790 PRMAPRG-TSVQSVSASEMEVSWNAIDWNRNTGRVLGYEVLYWTDDSKESMIGKIRVS-G 847

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
             T   +      +  FA V A+N A  GP S  ++  T +  P    +  A  L +S  
Sbjct: 848 NVTVKNITGLKANTLYFASVRAYNTAGTGPSSTPVNVTTKKSPPSQPPANIAWKLTNSKL 907

Query: 521 YLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STK 577
            L W  VK  +    ++GYKI Y+  + +K         +I +   TSA+L  L P    
Sbjct: 908 CLNWEHVKTMENESEVLGYKILYRQNRQSKT--------HILETNNTSAEL--LVPFEED 957

Query: 578 YRIHLAGYTKAGDGAESK 595
           Y I +   +  GDG+ S+
Sbjct: 958 YLIEIRTVSDGGDGSSSE 975


>gi|193784931|dbj|BAG54084.1| unnamed protein product [Homo sapiens]
          Length = 828

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 164/629 (26%), Positives = 266/629 (42%), Gaps = 57/629 (9%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 39  ALVGQQVTLECFAFGNPVPRIKWRKADGSLSPQWTTAE----PTLQIPSVSFEDEGTYEC 94

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEE------ETVTFECKASGLPEPEIH 158
           E  N  G         +V        +PE++    +        + + C A+G P P + 
Sbjct: 95  EAENSKGRD-------TVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVR 147

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+ ++      R +V    +    L   D+G Y C A N  G +Y    + V A A
Sbjct: 148 WLRNGELLAS---QNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALA 204

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKIT 275
           P+    P         G  +++ C+   APK  V W    + L    R T+   G L I 
Sbjct: 205 PDFRLNPVRRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIR 264

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           +++ +D G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP
Sbjct: 265 NISRSDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTLQCHASHDP 324

Query: 336 SLKLSIVWLRGSEPIDFES-----EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
           ++ L+  W     PIDF+          V+     LT+  +     G+YTC AQT +D  
Sbjct: 325 TMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSA 384

Query: 391 EAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDG 448
             +AT+ V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G
Sbjct: 385 SKEATVLVRGPPGPPGGVVVRDIGDTTIQ-LSWS----RGFDNHSPIAKYTLQARTPPAG 439

Query: 449 E-GSIRELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEG 502
           +   +R    N +G + T +V    P      RV+A N    G  +GP S+I    T E 
Sbjct: 440 KWKQVRTNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKI---RTREA 496

Query: 503 VPGTVQSLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
            P    S  +   G+     + W  +  E  NG   GY + ++    T       R+P  
Sbjct: 497 APSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQ--TARVPG- 553

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGST 614
           +D          + P T + + +  Y + GDG ES   L Y     P   P  V  +G +
Sbjct: 554 ADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVS 613

Query: 615 PNNLVISWTAMPEIEHNAPHFKYRI-FWR 642
            + + ++W  + + + N     Y I +W+
Sbjct: 614 SSEMNVTWEPVQQ-DMNGILLGYEIRYWK 641



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 132/588 (22%), Positives = 212/588 (36%), Gaps = 60/588 (10%)

Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
           + VT EC A G P P I W      +S     P+       + I ++   D G Y C A 
Sbjct: 43  QQVTLECFAFGNPVPRIKWRKADGSLS-----PQWTTAEPTLQIPSVSFEDEGTYECEAE 97

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT 260
           NS G       + V A  PE  +   D     G  +   C   G P+P V W+ N + L 
Sbjct: 98  NSKGRDTVQGRIIVQAQ-PEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGELLA 156

Query: 261 GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPEDYEV 319
                 +  GDL+ + ++  DSG Y C A NK GT   S  L V+         P    +
Sbjct: 157 SQNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLI 216

Query: 320 EAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQY 379
            A +            + K  ++W +G+E +   S  R   + D +L +   S  D G+Y
Sbjct: 217 PAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSS--RVTVTPDGTLIIRNISRSDEGKY 274

Query: 380 TCRAQTELDFIEAQATLTVQVPLE---APS--------NFTLIQVIDAKKAVV----SWN 424
           TC A+  +    +   L+V+   +   APS        N TL Q   +    +    +W 
Sbjct: 275 TCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTL-QCHASHDPTMDLTFTWT 333

Query: 425 ----PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
               P+      GH+R   V+   E  G+ +I    +  G   T      V ++   A V
Sbjct: 334 LDDFPIDFDKPGGHYRRTNVK---ETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATV 390

Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
           L                            +    +G +   L W +    +  +  Y ++
Sbjct: 391 LVRGPPG------------------PPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQ 432

Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------ 594
            ++    K   +    P   +    +A++ GL P   Y   +      G G  S      
Sbjct: 433 ARTPPAGKWKQVRTN-PANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKI 491

Query: 595 KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
           +     P   P  + G G  P  L+++WT M     N   F Y + +RR  +   W    
Sbjct: 492 RTREAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTH-WQTAR 550

Query: 655 VLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
           V        V +N+    + P+E+K+       DG  S+  L+ +  E
Sbjct: 551 VPGADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTALVYSAEE 598



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 141/614 (22%), Positives = 226/614 (36%), Gaps = 84/614 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G  +   +R+        L    +   D G Y C   N  G   
Sbjct: 136 CAAAGKPRPTVRWLRNGELLASQNRVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTIY 193

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F + P    I AA    +   C+    P+  + W    + +  +  
Sbjct: 194 A-SAELAVQALAPDFRLNPVRRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSS- 251

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V P+  + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 252 --RVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 308

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G  + L C     P  ++ +     +        GG Y    + ET GDL I +    
Sbjct: 309 NLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLR 368

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS---------------- 324
             G+YTC A+  + +A  S   TV               + G +                
Sbjct: 369 HGGKYTCMAQTVVDSA--SKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPI 426

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQ 378
           A +   A + P+ K   V    + P + E      Q        DY   V  S+ L +G+
Sbjct: 427 AKYTLQARTPPAGKWKQV---RTNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGE 483

Query: 379 YTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGY 438
            +    +++   EA  ++                     + +V+W P+S +   G   GY
Sbjct: 484 PSG-PSSKIRTREAAPSVAPSG--------LSGGGGAPGELIVNWTPMSREYQNGDGFGY 534

Query: 439 KVQ-------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            +         W      G+  +  V   ES    V  + P      ++ ++N   +GP 
Sbjct: 535 LLSFRRQGSTHWQTARVPGADAQYFVYSNES----VRPYTPFE---VKIRSYNRRGDGPE 587

Query: 492 SEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKGTKV 549
           S      + E  P    + + A  + SS   + W   +Q  NG+L+GY+I+Y      + 
Sbjct: 588 SLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGILLGYEIRYWKAGDKEA 647

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVE 609
                R   +     TSA+++GL P+TKY + +  Y +AG G  S        K P    
Sbjct: 648 AADRVRTAGLD----TSARVSGLHPNTKYHVTVRAYNRAGTGPASPSANATTMKPPPR-- 701

Query: 610 GRGSTPNNLVISWT 623
                P N  ISWT
Sbjct: 702 ---RPPGN--ISWT 710



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 80/183 (43%), Gaps = 8/183 (4%)

Query: 218 APEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITD 276
           AP I    P + Y + G+ V L C  FG P P + W      L+  ++T  E   L+I  
Sbjct: 26  APSIKARFPAETYALVGQQVTLECFAFGNPVPRIKWRKADGSLS-PQWTTAEP-TLQIPS 83

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
           V+F D G Y C A N  G     G + V+          D E + G +  + C A   P 
Sbjct: 84  VSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKP- 142

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            + ++ WLR  E +  ++    +  +   L  +K S  DSG Y C A+ +   I A A L
Sbjct: 143 -RPTVRWLRNGELLASQNRVEVLAGD---LRFSKLSLEDSGMYQCVAENKHGTIYASAEL 198

Query: 397 TVQ 399
            VQ
Sbjct: 199 AVQ 201


>gi|410899605|ref|XP_003963287.1| PREDICTED: contactin-3-like [Takifugu rubripes]
          Length = 1067

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 165/613 (26%), Positives = 252/613 (41%), Gaps = 59/613 (9%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A R   V L C   G P+P+  W + +GVP     ++   N    L I   +  D G Y 
Sbjct: 242 AARGSTVTLECFALGNPVPEITWKRANGVPFPSKVKMKYSN--AVLEIPSFQQDDTGGYE 299

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N +G+  + +  L+  A P +    +    A EE + +EC+A+G P+P   W+ NG
Sbjct: 300 CVAENRMGK-NTATGRLAFYAKPQWIQAVKDAALAIEERLHWECRANGKPKPSYTWLKNG 358

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           +   Q     R  V    +++  L  SD G Y C A N  G +Y    + VLA  P+ T 
Sbjct: 359 Q---QLLSGDRITVVDGVLSVSALALSDAGMYQCVAENKHGVIYFAAELMVLASPPDFTG 415

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
                      G TV L C+    P   + W      +    R T+   G L++ +V+ +
Sbjct: 416 NVLRALLKAKAGTTVTLECKPQAYPVASILWKKGNLPIHINDRVTLSPDGTLRLANVSKS 475

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTCFARN+ G +  +G L V + T IT  P D E+  G+S    C   SDP L +S
Sbjct: 476 DAGGYTCFARNRFGMSSTTGRLLVTDPTRITQGPVDMEIIVGESIVLPCQVASDPVLDVS 535

Query: 341 IVW-LRGSEPIDFESEPRFVQSNDYSLTVTKSSEL-DSGQYTCRAQTELDFIEAQATLTV 398
             W   G      +     V        + ++ +L  +G+Y C   T+++ + A A L V
Sbjct: 536 FSWAFNGQLIAKGDGHFELVGGRTAGDLMIRNIQLYHAGKYICVVDTDVESLSAVAILIV 595

Query: 399 QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRG-----YKVQTWTE-KDGEGSI 452
           + P   P + T+ +V D+  A ++W+       RG   G     Y +QT T    G   +
Sbjct: 596 KGPPSPPDSVTVEEVTDS-TAQLAWS-------RGRDNGSPIANYFIQTRTPFTVGWQRV 647

Query: 453 REL--IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-----ISFVTPEGVPG 505
             +  I++    T T VD        F RVLA N    G PS +          P+  PG
Sbjct: 648 NTVPEIIDGNTLTATVVDLNAWVEYEF-RVLARNSVGVGEPSPVSVRTRTEDAVPDAAPG 706

Query: 506 TVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQS---VKGTKV---GPLLERLP 557
            V          S   + W  V  E  NG   GY I +++   V  T V    P   R  
Sbjct: 707 DVGGGGG---SRSELVITWEPVPEELQNGESFGYIIAFRAFGEVSWTHVATSAPGASRYV 763

Query: 558 YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRG 612
           Y +D          + P + + + +  Y   G G  S  +        P   P  V  R 
Sbjct: 764 YRND---------SIAPFSPFHVKVGTYNSKGQGPFSPVVTIYSAEIEPSGMPAGVWARS 814

Query: 613 STPNNLVISWTAM 625
            + + + ++W A+
Sbjct: 815 VSASEIEVNWQAL 827



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 172/636 (27%), Positives = 251/636 (39%), Gaps = 84/636 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA---------PYFTVE-PEFINA 137
           +L +  VE SD G+YTC V+N V + K +S   +++           P   V  P+ ++A
Sbjct: 183 NLYVAKVEPSDVGNYTCVVTNSVTKGKVHSSPTALILKTDGVMGEYEPKIEVNFPDNVSA 242

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   TVT EC A G P PEI W   NG P    P   + K     + I + ++ DTG Y 
Sbjct: 243 ARGSTVTLECFALGNPVPEITWKRANGVPF---PSKVKMKYSNAVLEIPSFQQDDTGGYE 299

Query: 197 CNATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           C A N +G   K+     LA    P+  +A KD      + +   CR  G PKP   W+ 
Sbjct: 300 CVAENRMG---KNTATGRLAFYAKPQWIQAVKDAALAIEERLHWECRANGKPKPSYTWLK 356

Query: 255 N-QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
           N Q+ L+G R T+++ G L ++ +A +D+G Y C A NK G    +  L V         
Sbjct: 357 NGQQLLSGDRITVVD-GVLSVSALALSDAGMYQCVAENKHGVIYFAAELMV------LAS 409

Query: 314 PEDY---------EVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDY 364
           P D+         + +AG + T  C   + P    SI+W +G+ PI      R   S D 
Sbjct: 410 PPDFTGNVLRALLKAKAGTTVTLECKPQAYPV--ASILWKKGNLPIHIND--RVTLSPDG 465

Query: 365 SLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV---- 420
           +L +   S+ D+G YTC A+           L V  P         +++I  +  V    
Sbjct: 466 TLRLANVSKSDAGGYTCFARNRFGMSSTTGRLLVTDPTRITQGPVDMEIIVGESIVLPCQ 525

Query: 421 VSWNPVSPQSLRGHFRGYKVQ--------TWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
           V+ +PV   S    F G  +               G+  IR + +         VD  V 
Sbjct: 526 VASDPVLDVSFSWAFNGQLIAKGDGHFELVGGRTAGDLMIRNIQLYHAGKYICVVDTDVE 585

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
           +    A ++       GPPS   S    E    T Q             L W +      
Sbjct: 586 SLSAVAILIV-----KGPPSPPDSVTVEEVTDSTAQ-------------LAWSRGRDNGS 627

Query: 533 VLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            +  Y I  Q+     VG   +  +P I D  T +A +  L    +Y   +      G G
Sbjct: 628 PIANYFI--QTRTPFTVGWQRVNTVPEIIDGNTLTATVVDLNAWVEYEFRVLARNSVGVG 685

Query: 592 AESKYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
             S           VP   P +V G G + + LVI+W  +PE   N   F Y I +R   
Sbjct: 686 EPSPVSVRTRTEDAVPDAAPGDVGGGGGSRSELVITWEPVPEELQNGESFGYIIAFRAF- 744

Query: 646 TGE-AWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
            GE +W          S  V  N     F P+ +KV
Sbjct: 745 -GEVSWTHVATSAPGASRYVYRNDSIAPFSPFHVKV 779



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 144/379 (37%), Gaps = 29/379 (7%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVE-FSDQGSYTCEVS 107
           ++  L C   G P PQ  WS +G  IN      +   G +LII  ++ + D G Y C   
Sbjct: 47  EEATLTCDAKGVPPPQYRWSLNGTLINLGLDRRRRLSGGNLIISSLDRYQDVGMYQCMAF 106

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFEC---KASGLPEPEIHWVHNG 163
           N  G   S    L      +F V     ++  E + V   C    +SG  +    WV N 
Sbjct: 107 NAAGAILSRRASLQFAYLDHFKVHTRSAVSVREGQGVVLLCGTPTSSG--DLTYAWVFNE 164

Query: 164 KPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSL--GYVYKDVYVNVLA--- 216
            P      N RR V      + +  +  SD GNY C  TNS+  G V+      +L    
Sbjct: 165 YPYFVQQDN-RRFVSQQTGNLYVAKVEPSDVGNYTCVVTNSVTKGKVHSSPTALILKTDG 223

Query: 217 ----HAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILETG 270
               + P+I    P +     G TV L C   G P PE+ W   N               
Sbjct: 224 VMGEYEPKIEVNFPDNVSAARGSTVTLECFALGNPVPEITWKRANGVPFPSKVKMKYSNA 283

Query: 271 DLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN 330
            L+I      D+G Y C A N++G    +G L            +D  +   +   + C 
Sbjct: 284 VLEIPSFQQDDTGGYECVAENRMGKNTATGRLAFYAKPQWIQAVKDAALAIEERLHWECR 343

Query: 331 AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
           A   P  K S  WL+  + +        V   D  L+V+  +  D+G Y C A+ +   I
Sbjct: 344 ANGKP--KPSYTWLKNGQQLLSGDRITVV---DGVLSVSALALSDAGMYQCVAENKHGVI 398

Query: 391 EAQATLTVQVPLEAPSNFT 409
              A L V   L +P +FT
Sbjct: 399 YFAAELMV---LASPPDFT 414



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 108/268 (40%), Gaps = 27/268 (10%)

Query: 140 EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA 199
           EE  T  C A G+P P+  W  NG  I+      RR  G N I     R  D G Y C A
Sbjct: 46  EEEATLTCDAKGVPPPQYRWSLNGTLINLGLDRRRRLSGGNLIISSLDRYQDVGMYQCMA 105

Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVN----WIH 254
            N+ G +         A+        +   +V +G+ VVL C   G P    +    W+ 
Sbjct: 106 FNAAGAILSRRASLQFAYLDHFKVHTRSAVSVREGQGVVLLC---GTPTSSGDLTYAWVF 162

Query: 255 NQK----ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKL--GTAQGSGSLTVKEHT 308
           N+     +    R+   +TG+L +  V  +D G YTC   N +  G    S +  + +  
Sbjct: 163 NEYPYFVQQDNRRFVSQQTGNLYVAKVEPSDVGNYTCVVTNSVTKGKVHSSPTALILKTD 222

Query: 309 HITDQ---------PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFV 359
            +  +         P++     G + T  C A+ +P  +  I W R +  + F S+ +  
Sbjct: 223 GVMGEYEPKIEVNFPDNVSAARGSTVTLECFALGNPVPE--ITWKRANG-VPFPSKVKMK 279

Query: 360 QSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            SN   L +    + D+G Y C A+  +
Sbjct: 280 YSNAV-LEIPSFQQDDTGGYECVAENRM 306


>gi|449266436|gb|EMC77489.1| Receptor-type tyrosine-protein phosphatase F, partial [Columba
           livia]
          Length = 1861

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 171/679 (25%), Positives = 281/679 (41%), Gaps = 79/679 (11%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEF-S 97
           ++ +        C   G P P+  W K G  ++ S R     +    G  L I+ +    
Sbjct: 11  QIGISGGVASFVCQATGEPKPRITWMKKGKKVS-SQRFEVIEFDDGSGSVLRIQPLRVHR 69

Query: 98  DQGSYTCEVSNGVGEAKSYSIDLSVL-------AAPYFTVEPEFINAAEEETVTFECKAS 150
           D+  Y C  +N VGE  + S  L+VL         P   + P+     +  T T  C AS
Sbjct: 70  DEAIYECTATNSVGEINT-SAKLTVLEEDHLPAGFPTIDMGPQLKVVEKARTATMLCAAS 128

Query: 151 GLPEPEIHWVHNGKPISQAPPNPR-RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYK- 208
           G P+PEI W  +  P+  A  N R +++    + IEN  +SD G Y C ATNS G  Y  
Sbjct: 129 GNPDPEISWFKDFLPVDTATSNGRIKQLRSGALQIENSEESDQGKYECVATNSAGTRYSA 188

Query: 209 --DVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
             ++YV V   AP  +  P +   + G +V LTC   GAP P V W+   +ELT      
Sbjct: 189 PANLYVRVRRVAPRFSIPPSNHEVMPGGSVNLTCVAVGAPMPYVKWMAGVEELTKEDEMP 248

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
           +    L++ ++    S  YTC A + LG  + +  +TVK       +P   E  A     
Sbjct: 249 VGRNVLELNNIV--QSANYTCVAISSLGMIEATAQITVKALPKPPTEPLVTETTA----- 301

Query: 327 FRCNAVSDPSLKLSIVWLRG-SEPIDF---ESEPRFVQSNDYSLTVTKSSELDSGQYTCR 382
                       +++ W  G S+PI +   + +P+ ++     +    ++    G  +  
Sbjct: 302 ----------TSVTLTWDSGNSDPISYYVIQYKPKSLEGQFQEVDGVATTRYSIGGLSPF 351

Query: 383 AQTELDFIEAQ--------ATLTVQVPLEAPSNFTL---IQVIDAKKAVVSWNPVSPQSL 431
           ++ E   I             +  +   +APS+  L    +++ A   +V W    P+  
Sbjct: 352 SEYEFRVIAVNNIGRGPPSELVEARTGEQAPSSPPLKVQARMLSASTMLVQWE--QPEEP 409

Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            G  RGY+V   T+     S+ +   N  +S  T V   +  +    RVLAF    +GPP
Sbjct: 410 NGQIRGYRVYYTTDPHLPLSMWQKH-NTDDSHLTTVGSLITGTTYSIRVLAFTSVGDGPP 468

Query: 492 SEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY-QSVKGTKVG 550
           S+II   T +GVP      +A     +   L W+   Q    +  Y++ Y +   G +  
Sbjct: 469 SDIIQVKTQQGVPAQPADFQAEAESDTRILLTWLPASQER--ITKYELLYWEGEDGAQ-- 524

Query: 551 PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA-----ESKYLFYVPFKNP 605
              +++ +  DPT++ A + GL+P T Y+  L   ++ G G      E++     P   P
Sbjct: 525 ---QKVEF--DPTSSYA-VEGLKPDTLYKFRLGARSELGVGVYTPTIEARTAQSTPSAPP 578

Query: 606 DNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVL 665
             VE   ++   + +SW   P    N    +Y I ++     +  N   V+D    E   
Sbjct: 579 QEVECVSTSSTTIRVSWVPPPAQSRNGVITQYSIAYQAVEGDD--NTKHVVDGIGRE--- 633

Query: 666 ANQPTFQPYEIKVVQTWTE 684
                   +EIK ++ WTE
Sbjct: 634 -----HSSWEIKDLEKWTE 647



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 229/525 (43%), Gaps = 57/525 (10%)

Query: 131 EPEFINAAEEE------TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV------G 178
           +P F+ A E++        +F C+A+G P+P I W+  GK +S    + R +V       
Sbjct: 1   KPTFMKAPEDQIGISGGVASFVCQATGEPKPRITWMKKGKKVS----SQRFEVIEFDDGS 56

Query: 179 PNRITIENLR-KSDTGNYGCNATNSLGYVYKDVYVNVL------AHAPEITEAPKDEYTV 231
            + + I+ LR   D   Y C ATNS+G +     + VL      A  P I   P+ +   
Sbjct: 57  GSVLRIQPLRVHRDEAIYECTATNSVGEINTSAKLTVLEEDHLPAGFPTIDMGPQLKVVE 116

Query: 232 DGKTVVLTCRVFGAPKPEVNWIHN----QKELTGGRYTILETGDLKITDVAFADSGEYTC 287
             +T  + C   G P PE++W  +        + GR   L +G L+I +   +D G+Y C
Sbjct: 117 KARTATMLCAASGNPDPEISWFKDFLPVDTATSNGRIKQLRSGALQIENSEESDQGKYEC 176

Query: 288 FARNKLGTAQGS-GSLTVKEHT---HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVW 343
            A N  GT   +  +L V+        +  P ++EV  G S    C AV  P     + W
Sbjct: 177 VATNSAGTRYSAPANLYVRVRRVAPRFSIPPSNHEVMPGGSVNLTCVAVGAP--MPYVKW 234

Query: 344 LRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE 403
           + G E +  E E   V  N   L    ++ + S  YTC A + L  IEA A +TV+  L 
Sbjct: 235 MAGVEELTKEDE-MPVGRNVLEL----NNIVQSANYTCVAISSLGMIEATAQITVKA-LP 288

Query: 404 APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGEST 463
            P    L+    A    ++W+  +   +      Y V  +  K  EG  +E  V+   +T
Sbjct: 289 KPPTEPLVTETTATSVTLTWDSGNSDPI-----SYYVIQYKPKSLEGQFQE--VDGVATT 341

Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGT-VQSLEAIPLGSSAFYL 522
              +    P S+   RV+A N    GPPSE++   T E  P +    ++A  L +S   +
Sbjct: 342 RYSIGGLSPFSEYEFRVIAVNNIGRGPPSELVEARTGEQAPSSPPLKVQARMLSASTMLV 401

Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
           +W +PE+PNG + GY++ Y +     +    +     S  TT  + + G    T Y I +
Sbjct: 402 QWEQPEEPNGQIRGYRVYYTTDPHLPLSMWQKHNTDDSHLTTVGSLITG----TTYSIRV 457

Query: 583 AGYTKAGDGAESKYLFY-----VPFKNPDNVEGRGSTPNNLVISW 622
             +T  GDG  S  +       VP + P + +    +   ++++W
Sbjct: 458 LAFTSVGDGPPSDIIQVKTQQGVPAQ-PADFQAEAESDTRILLTW 501



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 151/683 (22%), Positives = 246/683 (36%), Gaps = 109/683 (15%)

Query: 25  SASQNRHAPKQQYVTRKKEVALR------------NKKVELFCIFGGTPLPQTIWSKDGV 72
           SA     AP   YV R + VA R               V L C+  G P+P   W     
Sbjct: 181 SAGTRYSAPANLYV-RVRRVAPRFSIPPSNHEVMPGGSVNLTCVAVGAPMPYVKWMAGVE 239

Query: 73  PINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP 132
            +   D +  G      +++        +YTC   + +G  ++ +  ++V A P    EP
Sbjct: 240 ELTKEDEMPVGRN----VLELNNIVQSANYTCVAISSLGMIEA-TAQITVKALPKPPTEP 294

Query: 133 EFI-NAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSD 191
                 A   T+T++   SG  +P  ++V   KP S                 + +    
Sbjct: 295 LVTETTATSVTLTWD---SGNSDPISYYVIQYKPKSLEG------------QFQEVDGVA 339

Query: 192 TGNYGCNATNSLG-YVYKDVYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKP 248
           T  Y     +    Y ++ + VN +   P  E+ EA   E       + +  R+  A   
Sbjct: 340 TTRYSIGGLSPFSEYEFRVIAVNNIGRGPPSELVEARTGEQAPSSPPLKVQARMLSASTM 399

Query: 249 EVNWIHNQK---ELTGGR--YTI-----------LETGDLKITDVAFADSG---EYTCFA 289
            V W   ++   ++ G R  YT              T D  +T V    +G        A
Sbjct: 400 LVQWEQPEEPNGQIRGYRVYYTTDPHLPLSMWQKHNTDDSHLTTVGSLITGTTYSIRVLA 459

Query: 290 RNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN---AVSDPSLKLSIVWLRG 346
              +G    S  + VK    +  QP D++ EA            A  +   K  +++  G
Sbjct: 460 FTSVGDGPPSDIIQVKTQQGVPAQPADFQAEAESDTRILLTWLPASQERITKYELLYWEG 519

Query: 347 ----SEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
                + ++F+    +          Y   +   SEL  G YT         IEA+   T
Sbjct: 520 EDGAQQKVEFDPTSSYAVEGLKPDTLYKFRLGARSELGVGVYT-------PTIEAR---T 569

Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIV 457
            Q    AP          +    VSW P   QS  G    Y +  +   +G+ + + ++ 
Sbjct: 570 AQSTPSAPPQEVECVSTSSTTIRVSWVPPPAQSRNGVITQYSI-AYQAVEGDDNTKHVVD 628

Query: 458 NKG-ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEAIPL 515
             G E ++ E+      ++    V A      GP S  +   T E VP    + +E   +
Sbjct: 629 GIGREHSSWEIKDLEKWTEYKVWVRAHTDVGPGPESIPVHVRTDEDVPSAPPRKVEVESV 688

Query: 516 GSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK---LA 570
            S+A  + W  P   + +G + GY++ Y  ++  +     +  P I D   + A+   + 
Sbjct: 689 NSTAIRVSWKLPISNKQHGQIRGYQVTYVKLENNEP----QGQPVIKDVMLSEAQETVIG 744

Query: 571 GLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPN--NLVISWTAM--- 625
           GL P T Y + +A YT  GDGA SK         P  +   G+ P    ++IS TAM   
Sbjct: 745 GLLPETTYSVTVAAYTTKGDGARSK---------PKVITTTGAVPGKPTMMISTTAMNTA 795

Query: 626 -----PEIEHNAPHFKYRIFWRR 643
                P  E       YR+ +RR
Sbjct: 796 LIQWHPPKEMVGELLGYRLQYRR 818



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 122/287 (42%), Gaps = 29/287 (10%)

Query: 404 APSNFTLIQVIDAKKAVVSWN-PVSPQSLRGHFRGYKVQTWT-----EKDGEGSIRELIV 457
           AP     ++ +++    VSW  P+S +   G  RGY+V T+      E  G+  I+++++
Sbjct: 678 APPRKVEVESVNSTAIRVSWKLPISNKQ-HGQIRGYQV-TYVKLENNEPQGQPVIKDVML 735

Query: 458 NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS 517
           ++ + T   +   +P +     V A+    +G  S+     T   VPG    + +    +
Sbjct: 736 SEAQETV--IGGLLPETTYSVTVAAYTTKGDGARSKPKVITTTGAVPGKPTMMISTTAMN 793

Query: 518 SAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLL--ERLPYISDPTTTSAKLAGLEPS 575
           +A  ++W  P++  G L+GY+++Y+ +   K+  +   +R  + +        +  L   
Sbjct: 794 TAL-IQWHPPKEMVGELLGYRLQYRRLDEEKMNTIDFGKRDHHYT--------VTNLHKG 844

Query: 576 TKYRIHLAGYTKAGDGAESKYLFY----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHN 631
             Y   L+   +AG G E +        VP   P N+   G T +   +SW      E N
Sbjct: 845 ATYLFKLSAKNRAGPGEEFEKEITTAEDVPSGFPQNLRVVGLTTSTTEVSWDPPVLAERN 904

Query: 632 APHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
                Y + +R  N+     QD V   + + + L N      Y+IKV
Sbjct: 905 GKIVNYTVVYRDINS----QQDLVNITKDTSITLTNLKPDTTYDIKV 947


>gi|402889982|ref|XP_003908274.1| PREDICTED: peroxidasin homolog [Papio anubis]
          Length = 1479

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 194/426 (45%), Gaps = 30/426 (7%)

Query: 51  VELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           V   C   G P P+ IW ++   + +    R++  + G +L+I++ + +DQG Y C   N
Sbjct: 263 VYFTCRAEGNPKPEIIWLRNNNELSMKTDSRLNLLDDG-TLMIQNTQETDQGIYQCMAKN 321

Query: 109 GVGEAKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             GE K+  + L      A P F ++P+       E+VT EC A+G P P I W    + 
Sbjct: 322 VAGEVKTQEVTLRYFGSPARPTFVIQPQNTEVLVGESVTLECSATGHPPPRISWTRGDR- 380

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            +  P +PR  + P+  + I+N+ + D+G Y C+ATNS+  V+   ++ V A  P+ T  
Sbjct: 381 -TPLPVDPRVNITPSGGLYIQNVVQEDSGEYACSATNSIDSVHATAFIIVQA-LPQFTVT 438

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSG 283
           P+D   ++G+TV   C   G P P + W     +L+   R+ +L +G L+I+ VA  D G
Sbjct: 439 PQDRVVIEGQTVDFQCEAKGNPPPVIAWTKGGSQLSVDRRHLVLSSGTLRISGVALHDQG 498

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +Y C A N +G+ +    LTV+          P D  VE G +    C++  +P  + +I
Sbjct: 499 QYECQAVNIIGSQKVVAHLTVQPRVTPVFASIPSDTTVEVGANVQLPCSSQGEP--EPAI 556

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV- 400
            W    + +      +F  S +  LT+      D+G+Y C A+  +        L+V V 
Sbjct: 557 TW--NKDGVQVTESGKFHISPEGFLTINDVGPADAGRYECVARNTIGSASVSMVLSVNVP 614

Query: 401 -------PLEAPSNFTLIQVID-----AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
                  P  A S    I  +D      +  +    P SP  L   FR  +     E+  
Sbjct: 615 DVSRNGDPFVATSIVEAIATVDRAINSTRTHLFDSRPRSPNDLLALFRYPRDPYTVEQAR 674

Query: 449 EGSIRE 454
            G I E
Sbjct: 675 AGEIFE 680



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 124/279 (44%), Gaps = 9/279 (3%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T EP   +     TV F C+A G P+PEI W+ N   +S    +    +    + I+
Sbjct: 246 PRITSEPRDADVTSGNTVYFTCRAEGNPKPEIIWLRNNNELSMKTDSRLNLLDDGTLMIQ 305

Query: 186 NLRKSDTGNYGCNATNSLGYV-YKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRV 242
           N +++D G Y C A N  G V  ++V +        P     P++   + G++V L C  
Sbjct: 306 NTQETDQGIYQCMAKNVAGEVKTQEVTLRYFGSPARPTFVIQPQNTEVLVGESVTLECSA 365

Query: 243 FGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSG 300
            G P P ++W    +       R  I  +G L I +V   DSGEY C A N + +   + 
Sbjct: 366 TGHPPPRISWTRGDRTPLPVDPRVNITPSGGLYIQNVVQEDSGEYACSATNSIDSVHATA 425

Query: 301 SLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQ 360
            + V+     T  P+D  V  GQ+  F+C A  +P     I W +G   +  +     + 
Sbjct: 426 FIIVQALPQFTVTPQDRVVIEGQTVDFQCEAKGNP--PPVIAWTKGGSQLSVDRRHLVLS 483

Query: 361 SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           S   +L ++  +  D GQY C+A   +   +  A LTVQ
Sbjct: 484 SG--TLRISGVALHDQGQYECQAVNIIGSQKVVAHLTVQ 520



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 119/263 (45%), Gaps = 9/263 (3%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           L  + V L C   G P P+  W++ D  P+    R++    G  L I++V   D G Y C
Sbjct: 354 LVGESVTLECSATGHPPPRISWTRGDRTPLPVDPRVNITPSG-GLYIQNVVQEDSGEYAC 412

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
             +N +    + +  + V A P FTV P+     E +TV F+C+A G P P I W   G 
Sbjct: 413 SATNSIDSVHATAF-IIVQALPQFTVTPQDRVVIEGQTVDFQCEAKGNPPPVIAWTKGG- 470

Query: 165 PISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA-PEIT 222
             SQ   + R  V     + I  +   D G Y C A N +G      ++ V     P   
Sbjct: 471 --SQLSVDRRHLVLSSGTLRISGVALHDQGQYECQAVNIIGSQKVVAHLTVQPRVTPVFA 528

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
             P D     G  V L C   G P+P + W  +  ++T  G++ I   G L I DV  AD
Sbjct: 529 SIPSDTTVEVGANVQLPCSSQGEPEPAITWNKDGVQVTESGKFHISPEGFLTINDVGPAD 588

Query: 282 SGEYTCFARNKLGTAQGSGSLTV 304
           +G Y C ARN +G+A  S  L+V
Sbjct: 589 AGRYECVARNTIGSASVSMVLSV 611


>gi|449283660|gb|EMC90265.1| Peroxidasin like protein, partial [Columba livia]
          Length = 1414

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 176/360 (48%), Gaps = 17/360 (4%)

Query: 51  VELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           V   C   G P P+ IW ++   + +    R++  + G +L+I++ + +DQG Y C   N
Sbjct: 197 VYFTCRAEGNPKPEIIWLRNNNELSMKEDSRLNLLDDG-TLMIQNTKETDQGIYQCMAKN 255

Query: 109 GVGEAKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             GE K+  + L      A P F + P+       E+VT EC A+G P+P I W    + 
Sbjct: 256 VAGEVKTQEVTLRYFESPARPSFVIHPQNTEVLVGESVTLECSAAGHPQPRITWTKGDR- 314

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            +  P +PR  + P+  + I+N+++ D+G Y C ATNS+  ++   Y+ V A  P+ T  
Sbjct: 315 -TPLPSDPRVTITPSGGLYIQNVKQEDSGEYTCFATNSIDNIHATAYIIVQA-LPQFTVT 372

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSG 283
           P+D+  ++G+TV   C   G P+P + W     +L+   R+ +L +G L+I+ VA  D G
Sbjct: 373 PQDKTVIEGQTVDFPCEAQGYPQPVIAWTKGGGQLSVDRRHLVLSSGTLRISRVALHDQG 432

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +Y C A N +G+ +    LTV+          P D  VE G +    C+A  +P  +  I
Sbjct: 433 QYECQAVNIIGSQRIVVYLTVQPRVTPVFASIPSDMTVEVGTNVQIPCSAQGEP--EPVI 490

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            W    + +      +F  S +  LT+      D G+Y C A+  + +      L+V VP
Sbjct: 491 TW--NKDGVQVTESGKFHVSPEGFLTIRDVGTADEGRYECVARNTIGYSSVSMVLSVNVP 548



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 154/347 (44%), Gaps = 25/347 (7%)

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAA--PYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           Q + TCE    +      +I    L    P  T EP+ ++     TV F C+A G P+PE
Sbjct: 151 QAAATCEYPRRIQGRSVATITPEELNCERPRITSEPQDVDVTSGNTVYFTCRAEGNPKPE 210

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV-YKDVYVNVL 215
           I W+ N   +S    +    +    + I+N +++D G Y C A N  G V  ++V +   
Sbjct: 211 IIWLRNNNELSMKEDSRLNLLDDGTLMIQNTKETDQGIYQCMAKNVAGEVKTQEVTLRYF 270

Query: 216 AH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGD 271
                P     P++   + G++V L C   G P+P + W    +    +  R TI  +G 
Sbjct: 271 ESPARPSFVIHPQNTEVLVGESVTLECSAAGHPQPRITWTKGDRTPLPSDPRVTITPSGG 330

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
           L I +V   DSGEYTCFA N +     +  + V+     T  P+D  V  GQ+  F C A
Sbjct: 331 LYIQNVKQEDSGEYTCFATNSIDNIHATAYIIVQALPQFTVTPQDKTVIEGQTVDFPCEA 390

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
              P  +  I W +G   +  +     + S   +L +++ +  D GQY C+A   +    
Sbjct: 391 QGYP--QPVIAWTKGGGQLSVDRRHLVLSSG--TLRISRVALHDQGQYECQAVNIIGSQR 446

Query: 392 AQATLTVQ---VPLEA--PSNFTL-----IQVIDAKKA----VVSWN 424
               LTVQ    P+ A  PS+ T+     +Q+  + +     V++WN
Sbjct: 447 IVVYLTVQPRVTPVFASIPSDMTVEVGTNVQIPCSAQGEPEPVITWN 493



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/265 (33%), Positives = 121/265 (45%), Gaps = 11/265 (4%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
            L  + V L C   G P P+  W+K D  P+    R++    G  L I++V+  D G YT
Sbjct: 287 VLVGESVTLECSAAGHPQPRITWTKGDRTPLPSDPRVTITPSG-GLYIQNVKQEDSGEYT 345

Query: 104 CEVSNGVG--EAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVH 161
           C  +N +    A +Y I   V A P FTV P+     E +TV F C+A G P+P I W  
Sbjct: 346 CFATNSIDNIHATAYII---VQALPQFTVTPQDKTVIEGQTVDFPCEAQGYPQPVIAWTK 402

Query: 162 NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA-PE 220
            G  +S    +     G  RI+   L   D G Y C A N +G     VY+ V     P 
Sbjct: 403 GGGQLSVDRRHLVLSSGTLRISRVALH--DQGQYECQAVNIIGSQRIVVYLTVQPRVTPV 460

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
               P D     G  V + C   G P+P + W  +  ++T  G++ +   G L I DV  
Sbjct: 461 FASIPSDMTVEVGTNVQIPCSAQGEPEPVITWNKDGVQVTESGKFHVSPEGFLTIRDVGT 520

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTV 304
           AD G Y C ARN +G +  S  L+V
Sbjct: 521 ADEGRYECVARNTIGYSSVSMVLSV 545



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 14/181 (7%)

Query: 31  HAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR---ISQGNYGK 87
            A  Q  VT + +  +  + V+  C   G P P   W+K G  ++   R   +S G    
Sbjct: 364 QALPQFTVTPQDKTVIEGQTVDFPCEAQGYPQPVIAWTKGGGQLSVDRRHLVLSSG---- 419

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSV--LAAPYFTVEPEFINAAEEETVTF 145
           +L I  V   DQG Y C+  N +G ++   + L+V     P F   P  +       V  
Sbjct: 420 TLRISRVALHDQGQYECQAVNIIG-SQRIVVYLTVQPRVTPVFASIPSDMTVEVGTNVQI 478

Query: 146 ECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLG 204
            C A G PEP I W  +G  ++++    +  V P   +TI ++  +D G Y C A N++G
Sbjct: 479 PCSAQGEPEPVITWNKDGVQVTES---GKFHVSPEGFLTIRDVGTADEGRYECVARNTIG 535

Query: 205 Y 205
           Y
Sbjct: 536 Y 536


>gi|345786236|ref|XP_541801.3| PREDICTED: contactin-6 isoform 1 [Canis lupus familiaris]
          Length = 1028

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 181/715 (25%), Positives = 299/715 (41%), Gaps = 76/715 (10%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    + S+      L I + +  D+G Y 
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGNPLPGKVKYSKSQ--AILEIPNFQQEDEGFYE 296

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G   +    L   A P +  + +    +  +++ +EC+ASG P P   W+ NG
Sbjct: 297 CIAGNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDSLFWECRASGKPNPWYTWLKNG 355

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++   P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 356 ERLN---PEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSK 412

Query: 224 AP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL-ETGDLKITDVAFA 280
            P  K+     G  + + C+    P+  ++W    + L   +   L E G LKI +V  +
Sbjct: 413 NPIKKNSVVQVGGDITIECKPNAFPRAVISWKRGMESLRQSKRVFLSEDGSLKIYNVTRS 472

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A+ +GSL VKE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 473 DAGSYTCIATNQFGVAKNTGSLVVKERTVITIPPSKMDVTVGESIVLPCQVSHDPSIEVV 532

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            +W    + ID +       R    +   L +       SG+Y C  +T L+ + A A +
Sbjct: 533 FIWSFNGDVIDLKKGVTHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAVADI 592

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW P S  +     + + VQ  T          ++
Sbjct: 593 IVRGPPGPPEDVR-VEHISSTTSQLSWRPGSDNN--SPIQIFTVQARTPFSVGWQAVSTV 649

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLE 511
            E++   G++    V    P  +   RV+A N    G PS+    + T   VP    +  
Sbjct: 650 PEIL--NGKTYNATVIGLSPWVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTNI 707

Query: 512 AIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
               GS S   + W  +  E  NG   GY I  + V  T      +R+P + + +    +
Sbjct: 708 NGGGGSRSELVITWESIPEELQNGEEFGYIIMLRPVGSTSWTK--KRVPSV-ESSRFVYR 764

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESKY-LFYVPFKNPDNVEGRGS----TPNNLVISWT 623
              + P + + + +  Y   G+G+ S   + Y     P    G  S    + + + +SW 
Sbjct: 765 NESITPLSPFEVKVGVYNNEGEGSLSTVSIVYSGEDEPQLAPGGTSVQSFSASEMEVSWN 824

Query: 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWT 683
           A+                       AWN       R +  VL        YE   V  WT
Sbjct: 825 AI-----------------------AWN-------RNTGRVLG-------YE---VLYWT 844

Query: 684 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           +   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S  ++  T
Sbjct: 845 DDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNSAGAGPSSPPVNVTT 898



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 166/660 (25%), Positives = 255/660 (38%), Gaps = 87/660 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC ++N   EA+      SV   P   V+                
Sbjct: 180 NLYIAKVEPSDVGNYTCFITN--KEAQR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 232

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ +V  EC A G P P+I W   +G P+   P   +       + I N ++
Sbjct: 233 FPETIQAAKDSSVKLECFALGNPVPDISWRRLDGNPL---PGKVKYSKSQAILEIPNFQQ 289

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A N  G       + +    PE  +  ++ Y     ++   CR  G P P 
Sbjct: 290 EDEGFYECIAGNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDSLFWECRASGKPNPW 348

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L       +E G L IT +  +DSG Y C A NK      +  L V     
Sbjct: 349 YTWLKNGERLNPEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAP 408

Query: 309 HITDQP--EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P  ++  V+ G   T  C   + P  +  I W RG E        R   S D SL
Sbjct: 409 DFSKNPIKKNSVVQVGGDITIECKPNAFP--RAVISWKRGME--SLRQSKRVFLSEDGSL 464

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV------ 420
            +   +  D+G YTC A  +    +   +L V+         T+I +  +K  V      
Sbjct: 465 KIYNVTRSDAGSYTCIATNQFGVAKNTGSLVVK-------ERTVITIPPSKMDVTVGESI 517

Query: 421 -----VSWNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKF 470
                VS +P         F G  +      T  E+ G  S+ +L++   +       K+
Sbjct: 518 VLPCQVSHDPSIEVVFIWSFNGDVIDLKKGVTHFERIGGESVGDLMIRNIQ--LNHSGKY 575

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
           +   K     L+            ++ +   G PG  + +    + S+   L W      
Sbjct: 576 LCTVKTTLESLS-----------AVADIIVRGPPGPPEDVRVEHISSTTSQLSWRPGSDN 624

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           N  +  + +  Q+     VG   +  +P I +  T +A + GL P  +Y   +      G
Sbjct: 625 NSPIQIFTV--QARTPFSVGWQAVSTVPEILNGKTYNATVIGLSPWVEYEFRVVAGNSIG 682

Query: 590 DGAESKYLFY------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  SK          VP   P N+ G G + + LVI+W ++PE   N   F Y I  R 
Sbjct: 683 IGEPSKASELLRTKASVPVVAPTNINGGGGSRSELVITWESIPEELQNGEEFGYIIMLRP 742

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
             +  +W +  V     S  V  N+      P+E+KV       +GEGS+  + IV  GE
Sbjct: 743 VGS-TSWTKKRVPSVESSRFVYRNESITPLSPFEVKV--GVYNNEGEGSLSTVSIVYSGE 799



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 158/638 (24%), Positives = 254/638 (39%), Gaps = 79/638 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +NP +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 339 CRASGKPNPWYTWLKNGERLNPEERIQIEN--GTLIITMLNVSDSGVYQCAAENKY-QII 395

Query: 115 SYSIDLSVLA-APYFTVEPEFINAAEE--ETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
             + +L VLA AP F+  P   N+  +    +T ECK +  P   I W    + + Q+  
Sbjct: 396 YANAELRVLASAPDFSKNPIKKNSVVQVGGDITIECKPNAFPRAVISWKRGMESLRQSKR 455

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
               + G   + I N+ +SD G+Y C ATN  G V K+    V+     IT  P      
Sbjct: 456 VFLSEDG--SLKIYNVTRSDAGSYTCIATNQFG-VAKNTGSLVVKERTVITIPPSKMDVT 512

Query: 232 DGKTVVLTCRVFGAPKPEVNWIHN-------------QKELTGGRYTILETGDLKITDVA 278
            G+++VL C+V   P  EV +I +               E  GG       GDL I ++ 
Sbjct: 513 VGESIVLPCQVSHDPSIEVVFIWSFNGDVIDLKKGVTHFERIGGE----SVGDLMIRNIQ 568

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSDPS 336
              SG+Y C  +  L +      + V+        PED  VE   S T + +    SD +
Sbjct: 569 LNHSGKYLCTVKTTLESLSAVADIIVRGPP---GPPEDVRVEHISSTTSQLSWRPGSDNN 625

Query: 337 LKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
             + I  ++   P         + P  +    Y+ TV   S     ++   A   +   E
Sbjct: 626 SPIQIFTVQARTPFSVGWQAVSTVPEILNGKTYNATVIGLSPWVEYEFRVVAGNSIGIGE 685

Query: 392 ---AQATLTVQ--VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ----- 441
              A   L  +  VP+ AP+N          + V++W  +  +   G   GY +      
Sbjct: 686 PSKASELLRTKASVPVVAPTNINGGGG-SRSELVITWESIPEELQNGEEFGYIIMLRPVG 744

Query: 442 --TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
             +WT+K          V + ES T       P S    +V  +N    G  S +    +
Sbjct: 745 STSWTKKRVPSVESSRFVYRNESIT-------PLSPFEVKVGVYNNEGEGSLSTVSIVYS 797

Query: 500 ----PEGVPG--TVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKVGP 551
               P+  PG  +VQS  A  +  S   + W    +  G ++GY++ Y     K + +G 
Sbjct: 798 GEDEPQLAPGGTSVQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDSKESMIGK 854

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPD 606
           +      +S   TT   + GL+ +T Y   +  Y  AG G  S  +        P + P 
Sbjct: 855 I-----RVSGNVTTK-NITGLKANTIYFASVRAYNSAGAGPSSPPVNVTTKKSPPSQPPA 908

Query: 607 NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           N+  +  T + L ++W  +  +E+ +    Y+I +R++
Sbjct: 909 NIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQN 945



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 107/288 (37%), Gaps = 36/288 (12%)

Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
           +L+ P FT EP+   F     +  +   C A+G P P   W  NG  I        R  G
Sbjct: 22  LLSRPIFTEEPQDVIFPLDLPKSEIILNCAATGYPSPHYRWKQNGTDIDFIMSYHYRLDG 81

Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
            N          D G Y C ATN+LG +         A+  +     +   +V +G+ VV
Sbjct: 82  GNLAISSPRTDQDIGIYQCLATNTLGTILSRKAKLQFAYIEDFETKTRSMVSVREGQGVV 141

Query: 238 LTCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCF 288
           L C     P P        W  N   L       R+   ETG+L I  V  +D G YTCF
Sbjct: 142 LLC----GPPPHFGDLSYAWTFNDNPLYVQEDKRRFVSQETGNLYIAKVEPSDVGNYTCF 197

Query: 289 ARNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSL 337
             NK    + QG  +  V+    +  +         PE  +     S    C A+ +P  
Sbjct: 198 ITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVP 257

Query: 338 KLSIVWLRGSEPIDFESEPRFVQ--SNDYSLTVTKSSELDSGQYTCRA 383
            +S  W R    +D    P  V+   +   L +    + D G Y C A
Sbjct: 258 DIS--WRR----LDGNPLPGKVKYSKSQAILEIPNFQQEDEGFYECIA 299



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 118/497 (23%), Positives = 179/497 (36%), Gaps = 76/497 (15%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY---GKSLIIKHVEFS-DQGS 101
           L   ++ L C   G P P   W ++G  I   D I   +Y   G +L I       D G 
Sbjct: 41  LPKSEIILNCAATGYPSPHYRWKQNGTDI---DFIMSYHYRLDGGNLAISSPRTDQDIGI 97

Query: 102 YTCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPEI--- 157
           Y C  +N +G   S    L       F T     ++  E + V   C     P P     
Sbjct: 98  YQCLATNTLGTILSRKAKLQFAYIEDFETKTRSMVSVREGQGVVLLCG----PPPHFGDL 153

Query: 158 --HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY-------- 205
              W  N  P+     + RR V      + I  +  SD GNY C  TN            
Sbjct: 154 SYAWTFNDNPL-YVQEDKRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPPT 212

Query: 206 --------VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQ 256
                   V  +    +    PE  +A KD       +V L C   G P P+++W   + 
Sbjct: 213 PLVQRTDGVMGEYEPKIEVRFPETIQAAKD------SSVKLECFALGNPVPDISWRRLDG 266

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
             L G          L+I +    D G Y C A N  G     G L          + ++
Sbjct: 267 NPLPGKVKYSKSQAILEIPNFQQEDEGFYECIAGNLRGRNLAKGQLIFYAPPEWEQKIQN 326

Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
             +    S  + C A   P+   +  WL+  E ++ E     +Q  + +L +T  +  DS
Sbjct: 327 TYLSIYDSLFWECRASGKPNPWYT--WLKNGERLNPEER---IQIENGTLIITMLNVSDS 381

Query: 377 GQYTCRAQTELDFIEAQATLTVQVPLEAPSNF--------TLIQV-----IDAK-----K 418
           G Y C A+ +   I A A L V   L +  +F        +++QV     I+ K     +
Sbjct: 382 GVYQCAAENKYQIIYANAELRV---LASAPDFSKNPIKKNSVVQVGGDITIECKPNAFPR 438

Query: 419 AVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI-VNKGESTTTEVDKFVPASKNF 477
           AV+SW     +SLR   R      +  +DG   I  +   + G  T    ++F  A    
Sbjct: 439 AVISWKR-GMESLRQSKR-----VFLSEDGSLKIYNVTRSDAGSYTCIATNQFGVAKNTG 492

Query: 478 ARVLAFNGAYNGPPSEI 494
           + V+        PPS++
Sbjct: 493 SLVVKERTVITIPPSKM 509



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 106/242 (43%), Gaps = 17/242 (7%)

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDA 416
           RFV  N+ S+T     E+  G Y    +  L  +    +   + P  AP   T +Q   A
Sbjct: 760 RFVYRNE-SITPLSPFEVKVGVYNNEGEGSLSTVSIVYSGEDE-PQLAPGG-TSVQSFSA 816

Query: 417 KKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
            +  VSWN ++     G   GY+V  WT+   E  I ++ V+ G  TT  +      +  
Sbjct: 817 SEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVS-GNVTTKNITGLKANTIY 875

Query: 477 FARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVL 534
           FA V A+N A  GP S  ++  T +  P    +  A  L +S   L W  VK  +    +
Sbjct: 876 FASVRAYNSAGAGPSSPPVNVTTKKSPPSQPPANIAWKLTNSKLCLNWEHVKTMENESEV 935

Query: 535 MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGYTKAGDGAE 593
           +GYKI Y+  + +K         +I +   TSA+L  L P    Y I +   +  GDG+ 
Sbjct: 936 LGYKILYRQNRQSKT--------HILETNNTSAEL--LVPFEEDYLIEIRTVSDGGDGSS 985

Query: 594 SK 595
           S+
Sbjct: 986 SE 987


>gi|345786238|ref|XP_003432801.1| PREDICTED: contactin-6 [Canis lupus familiaris]
          Length = 956

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 181/715 (25%), Positives = 299/715 (41%), Gaps = 76/715 (10%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    + S+      L I + +  D+G Y 
Sbjct: 167 AAKDSSVKLECFALGNPVPDISWRRLDGNPLPGKVKYSKSQ--AILEIPNFQQEDEGFYE 224

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G   +    L   A P +  + +    +  +++ +EC+ASG P P   W+ NG
Sbjct: 225 CIAGNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDSLFWECRASGKPNPWYTWLKNG 283

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++   P  R ++    + I  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 284 ERLN---PEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSK 340

Query: 224 AP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL-ETGDLKITDVAFA 280
            P  K+     G  + + C+    P+  ++W    + L   +   L E G LKI +V  +
Sbjct: 341 NPIKKNSVVQVGGDITIECKPNAFPRAVISWKRGMESLRQSKRVFLSEDGSLKIYNVTRS 400

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A+ +GSL VKE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 401 DAGSYTCIATNQFGVAKNTGSLVVKERTVITIPPSKMDVTVGESIVLPCQVSHDPSIEVV 460

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            +W    + ID +       R    +   L +       SG+Y C  +T L+ + A A +
Sbjct: 461 FIWSFNGDVIDLKKGVTHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAVADI 520

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW P S  +     + + VQ  T          ++
Sbjct: 521 IVRGPPGPPEDVR-VEHISSTTSQLSWRPGSDNN--SPIQIFTVQARTPFSVGWQAVSTV 577

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLE 511
            E++   G++    V    P  +   RV+A N    G PS+    + T   VP    +  
Sbjct: 578 PEIL--NGKTYNATVIGLSPWVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTNI 635

Query: 512 AIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
               GS S   + W  +  E  NG   GY I  + V  T      +R+P + + +    +
Sbjct: 636 NGGGGSRSELVITWESIPEELQNGEEFGYIIMLRPVGSTSWTK--KRVPSV-ESSRFVYR 692

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESKY-LFYVPFKNPDNVEGRGS----TPNNLVISWT 623
              + P + + + +  Y   G+G+ S   + Y     P    G  S    + + + +SW 
Sbjct: 693 NESITPLSPFEVKVGVYNNEGEGSLSTVSIVYSGEDEPQLAPGGTSVQSFSASEMEVSWN 752

Query: 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWT 683
           A+                       AWN       R +  VL        YE   V  WT
Sbjct: 753 AI-----------------------AWN-------RNTGRVLG-------YE---VLYWT 772

Query: 684 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
           +   E  I ++ V+ G  TT  +      +  FA V A+N A  GP S  ++  T
Sbjct: 773 DDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNSAGAGPSSPPVNVTT 826



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 166/660 (25%), Positives = 255/660 (38%), Gaps = 87/660 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC ++N   EA+      SV   P   V+                
Sbjct: 108 NLYIAKVEPSDVGNYTCFITNK--EAQR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 160

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ +V  EC A G P P+I W   +G P+   P   +       + I N ++
Sbjct: 161 FPETIQAAKDSSVKLECFALGNPVPDISWRRLDGNPL---PGKVKYSKSQAILEIPNFQQ 217

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A N  G       + +    PE  +  ++ Y     ++   CR  G P P 
Sbjct: 218 EDEGFYECIAGNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDSLFWECRASGKPNPW 276

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L       +E G L IT +  +DSG Y C A NK      +  L V     
Sbjct: 277 YTWLKNGERLNPEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAP 336

Query: 309 HITDQP--EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P  ++  V+ G   T  C   + P  +  I W RG E        R   S D SL
Sbjct: 337 DFSKNPIKKNSVVQVGGDITIECKPNAFP--RAVISWKRGME--SLRQSKRVFLSEDGSL 392

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV------ 420
            +   +  D+G YTC A  +    +   +L V+         T+I +  +K  V      
Sbjct: 393 KIYNVTRSDAGSYTCIATNQFGVAKNTGSLVVK-------ERTVITIPPSKMDVTVGESI 445

Query: 421 -----VSWNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKF 470
                VS +P         F G  +      T  E+ G  S+ +L++   +       K+
Sbjct: 446 VLPCQVSHDPSIEVVFIWSFNGDVIDLKKGVTHFERIGGESVGDLMIRNIQ--LNHSGKY 503

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
           +   K     L+            ++ +   G PG  + +    + S+   L W      
Sbjct: 504 LCTVKTTLESLS-----------AVADIIVRGPPGPPEDVRVEHISSTTSQLSWRPGSDN 552

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           N  +  + +  Q+     VG   +  +P I +  T +A + GL P  +Y   +      G
Sbjct: 553 NSPIQIFTV--QARTPFSVGWQAVSTVPEILNGKTYNATVIGLSPWVEYEFRVVAGNSIG 610

Query: 590 DGAESKY------LFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  SK          VP   P N+ G G + + LVI+W ++PE   N   F Y I  R 
Sbjct: 611 IGEPSKASELLRTKASVPVVAPTNINGGGGSRSELVITWESIPEELQNGEEFGYIIMLRP 670

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
             +  +W +  V     S  V  N+      P+E+KV       +GEGS+  + IV  GE
Sbjct: 671 VGS-TSWTKKRVPSVESSRFVYRNESITPLSPFEVKV--GVYNNEGEGSLSTVSIVYSGE 727



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 158/638 (24%), Positives = 254/638 (39%), Gaps = 79/638 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +NP +RI   N   +LII  +  SD G Y C   N   +  
Sbjct: 267 CRASGKPNPWYTWLKNGERLNPEERIQIEN--GTLIITMLNVSDSGVYQCAAENKY-QII 323

Query: 115 SYSIDLSVLA-APYFTVEPEFINAAEE--ETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
             + +L VLA AP F+  P   N+  +    +T ECK +  P   I W    + + Q+  
Sbjct: 324 YANAELRVLASAPDFSKNPIKKNSVVQVGGDITIECKPNAFPRAVISWKRGMESLRQSKR 383

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
               + G   + I N+ +SD G+Y C ATN  G V K+    V+     IT  P      
Sbjct: 384 VFLSEDG--SLKIYNVTRSDAGSYTCIATNQFG-VAKNTGSLVVKERTVITIPPSKMDVT 440

Query: 232 DGKTVVLTCRVFGAPKPEVNWIHN-------------QKELTGGRYTILETGDLKITDVA 278
            G+++VL C+V   P  EV +I +               E  GG       GDL I ++ 
Sbjct: 441 VGESIVLPCQVSHDPSIEVVFIWSFNGDVIDLKKGVTHFERIGGE----SVGDLMIRNIQ 496

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSDPS 336
              SG+Y C  +  L +      + V+        PED  VE   S T + +    SD +
Sbjct: 497 LNHSGKYLCTVKTTLESLSAVADIIVRGPP---GPPEDVRVEHISSTTSQLSWRPGSDNN 553

Query: 337 LKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
             + I  ++   P         + P  +    Y+ TV   S     ++   A   +   E
Sbjct: 554 SPIQIFTVQARTPFSVGWQAVSTVPEILNGKTYNATVIGLSPWVEYEFRVVAGNSIGIGE 613

Query: 392 ---AQATLTVQ--VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ----- 441
              A   L  +  VP+ AP+N          + V++W  +  +   G   GY +      
Sbjct: 614 PSKASELLRTKASVPVVAPTNINGGGG-SRSELVITWESIPEELQNGEEFGYIIMLRPVG 672

Query: 442 --TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
             +WT+K          V + ES T       P S    +V  +N    G  S +    +
Sbjct: 673 STSWTKKRVPSVESSRFVYRNESIT-------PLSPFEVKVGVYNNEGEGSLSTVSIVYS 725

Query: 500 ----PEGVPG--TVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKVGP 551
               P+  PG  +VQS  A  +  S   + W    +  G ++GY++ Y     K + +G 
Sbjct: 726 GEDEPQLAPGGTSVQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDSKESMIGK 782

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPD 606
           +      +S   TT   + GL+ +T Y   +  Y  AG G  S  +        P + P 
Sbjct: 783 I-----RVSGNVTTK-NITGLKANTIYFASVRAYNSAGAGPSSPPVNVTTKKSPPSQPPA 836

Query: 607 NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
           N+  +  T + L ++W  +  +E+ +    Y+I +R++
Sbjct: 837 NIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQN 873



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 106/242 (43%), Gaps = 17/242 (7%)

Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDA 416
           RFV  N+ S+T     E+  G Y    +  L  +    +   + P  AP   T +Q   A
Sbjct: 688 RFVYRNE-SITPLSPFEVKVGVYNNEGEGSLSTVSIVYSGEDE-PQLAPGG-TSVQSFSA 744

Query: 417 KKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
            +  VSWN ++     G   GY+V  WT+   E  I ++ V+ G  TT  +      +  
Sbjct: 745 SEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVS-GNVTTKNITGLKANTIY 803

Query: 477 FARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVL 534
           FA V A+N A  GP S  ++  T +  P    +  A  L +S   L W  VK  +    +
Sbjct: 804 FASVRAYNSAGAGPSSPPVNVTTKKSPPSQPPANIAWKLTNSKLCLNWEHVKTMENESEV 863

Query: 535 MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGYTKAGDGAE 593
           +GYKI Y+  + +K         +I +   TSA+L  L P    Y I +   +  GDG+ 
Sbjct: 864 LGYKILYRQNRQSKT--------HILETNNTSAEL--LVPFEEDYLIEIRTVSDGGDGSS 913

Query: 594 SK 595
           S+
Sbjct: 914 SE 915



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 82/216 (37%), Gaps = 33/216 (15%)

Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPE 249
           D G Y C ATN+LG +         A+  +     +   +V +G+ VVL C     P P 
Sbjct: 22  DIGIYQCLATNTLGTILSRKAKLQFAYIEDFETKTRSMVSVREGQGVVLLC----GPPPH 77

Query: 250 VN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCFARNKLG--TAQG 298
                  W  N   L       R+   ETG+L I  V  +D G YTCF  NK    + QG
Sbjct: 78  FGDLSYAWTFNDNPLYVQEDKRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQG 137

Query: 299 SGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEP 349
             +  V+    +  +         PE  +     S    C A+ +P   +S  W R    
Sbjct: 138 PPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDIS--WRR---- 191

Query: 350 IDFESEPRFVQ--SNDYSLTVTKSSELDSGQYTCRA 383
           +D    P  V+   +   L +    + D G Y C A
Sbjct: 192 LDGNPLPGKVKYSKSQAILEIPNFQQEDEGFYECIA 227


>gi|444706384|gb|ELW47726.1| Contactin-2 [Tupaia chinensis]
          Length = 1019

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 166/360 (46%), Gaps = 16/360 (4%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWATAE----PTLQIPSVSFEDEGTYEC 306

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           E  N  G   +    + V A P +      + A     + + C A+G P P + W+ NG+
Sbjct: 307 EAENSKGR-DTVQGRIIVQAQPEWLKVISDMEADIGANLHWGCAAAGKPRPTVRWLRNGE 365

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           P++      R +V    +    L   D+G Y C A N  G +Y    + V A AP+    
Sbjct: 366 PLAS---QNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLN 422

Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
           P         G  VV+ C    APK  V W    + L    R T+   G L I +++ +D
Sbjct: 423 PVRRLIPAARGGEVVIPCEPRAAPKAIVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSD 482

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP++ L+ 
Sbjct: 483 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTF 542

Query: 342 VWLRGSEPIDFES-----EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W     PIDF+          V+     LT+  +     G+YTC AQT +D    +AT+
Sbjct: 543 TWTLDDFPIDFDKPGGHYRRASVKETVGDLTILNAQLRHGGKYTCMAQTVVDSAAKEATV 602



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 148/375 (39%), Gaps = 38/375 (10%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           ++V L C    +P     W  +G  + + P  R  Q   G  +I+   +  D G Y C  
Sbjct: 55  EQVTLACRARASPPASYRWRMNGTEMKLEPGSR-HQLVGGNLVIMNPTKAQDAGVYQCLA 113

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIH------- 158
           SN VG   S    L       F    EF     +   T E     LP  P  H       
Sbjct: 114 SNPVGTVVSREAILR------FGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYR 167

Query: 159 WVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY----- 211
           W+ N  P +  P + R  V      + I     SD GNY C AT+ + +  K V+     
Sbjct: 168 WLLNEFP-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQ 226

Query: 212 VNVLAH-----APEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           +N+ A      AP I    P + Y + G+ V L C  FG P P + W      L+    T
Sbjct: 227 LNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWAT 286

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
              T  L+I  V+F D G Y C A N  G     G + V+          D E + G + 
Sbjct: 287 AEPT--LQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDMEADIGANL 344

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P  + ++ WLR  EP+  ++    +  +   L  +K S  DSG Y C A+ 
Sbjct: 345 HWGCAAAGKP--RPTVRWLRNGEPLASQNRVEVLAGD---LRFSKLSLEDSGMYQCVAEN 399

Query: 386 ELDFIEAQATLTVQV 400
           +   I A A L VQ 
Sbjct: 400 KHGTIYASAELAVQA 414



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 72/299 (24%), Positives = 115/299 (38%), Gaps = 34/299 (11%)

Query: 126 PYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
           P F  +P    F   + EE VT  C+A   P     W  NG  +   P +  + VG N +
Sbjct: 37  PVFEDQPLSLLFPEESTEEQVTLACRARASPPASYRWRMNGTEMKLEPGSRHQLVGGNLV 96

Query: 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTCR 241
            +   +  D G Y C A+N +G V     +       E ++  +D   T +G  V+L C 
Sbjct: 97  IMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKTHEGWGVMLPCN 156

Query: 242 VFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGTA 296
                P     W+ N+      T GR+ + + TG+L I     +D G Y+C A + +  +
Sbjct: 157 PPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFS 216

Query: 297 QGSGSLTVKEHTHITDQPEDYEVEA---------------GQSATFRCNAVSDPSLKLSI 341
             S      +   +    ED  + A               GQ  T  C A  +P  +  I
Sbjct: 217 TKS---VFSKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPR--I 271

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
            W +    +D    P++  + + +L +   S  D G Y C A+        Q  + VQ 
Sbjct: 272 KWRK----VDGSLSPQWATA-EPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQA 325



 Score = 43.9 bits (102), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 6/118 (5%)

Query: 479 RVLAFNGAYNGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQ-PNGVLMG 536
           ++ ++N   +GP S      + E  P    + + A  + SS   + W   +Q  NG+L+G
Sbjct: 766 KIRSYNRRGDGPESLTALVYSAEEEPRVAPAKVWAKGVSSSEMNVTWEPGQQDTNGILLG 825

Query: 537 YKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           Y+I+Y      +      R   +     TSA+++GL P+TKY + +  Y +AG G  S
Sbjct: 826 YEIRYWKAGDKEAAADRVRTAGLD----TSARVSGLHPNTKYHVTVRAYNRAGTGPAS 879


>gi|149051059|gb|EDM03232.1| rCG62054 [Rattus norvegicus]
          Length = 1227

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 191/401 (47%), Gaps = 21/401 (5%)

Query: 51  VELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           V   C   G P P+ IW ++   + +    R++  + G +L+I++ + +D+G Y C   N
Sbjct: 260 VYFTCRAEGNPKPEIIWLRNNNELSMKTDSRLNLLDDG-TLMIQNTQEADEGVYQCMAKN 318

Query: 109 GVGEAKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             GEAK++ + L  L   A P F ++P+       E+VT EC A+G P P+I W    + 
Sbjct: 319 VAGEAKTHEVTLRYLGSPARPTFVIQPQNTEVLVGESVTLECSATGHPLPQITWTRGDR- 377

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            +  P +PR  + P+  + I+N+ +SD+G Y C A+NS+  ++   ++ V A  P+ T  
Sbjct: 378 -TPLPIDPRVNITPSGGLYIQNVAQSDSGEYTCFASNSVDSIHATAFIIVQA-LPQFTVT 435

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSG 283
           P+    ++G+TV   C   G P+P + W     +L+   R+ +L +G L+I+ VA  D G
Sbjct: 436 PQSRVVIEGQTVDFQCEAKGYPQPVIAWTKGGSQLSVDRRHLVLSSGTLRISGVALHDQG 495

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +Y C A N +G+ +    LTV+          P D  VE G +    C++  +P  + +I
Sbjct: 496 QYECQAVNIIGSQKVVAHLTVQPRVTPVFASIPSDMTVEVGTNVQLPCSSQGEP--EPAI 553

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-- 399
            W    + +      +F  S +  LT+      D+G+Y C A+  + +      L+V   
Sbjct: 554 TW--NKDGVQVTESGKFHISPEGFLTINDVGTADAGRYECVARNTIGYASVSMVLSVNGY 611

Query: 400 --VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGY 438
               L +P   +LI  +    A    N  S       +R +
Sbjct: 612 HYNDLVSPQYLSLIANLSGCTAHRRVNNCSDMCFHQKYRTH 652



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 136/300 (45%), Gaps = 19/300 (6%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDG---VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
           L  + V L C   G PLPQ  W++     +PI+P   I+       L I++V  SD G Y
Sbjct: 351 LVGESVTLECSATGHPLPQITWTRGDRTPLPIDPRVNITPSG---GLYIQNVAQSDSGEY 407

Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
           TC  SN V    + +  + V A P FTV P+     E +TV F+C+A G P+P I W   
Sbjct: 408 TCFASNSVDSIHATAF-IIVQALPQFTVTPQSRVVIEGQTVDFQCEAKGYPQPVIAWTKG 466

Query: 163 GKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA-PE 220
           G   SQ   + R  V     + I  +   D G Y C A N +G      ++ V     P 
Sbjct: 467 G---SQLSVDRRHLVLSSGTLRISGVALHDQGQYECQAVNIIGSQKVVAHLTVQPRVTPV 523

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
               P D     G  V L C   G P+P + W  +  ++T  G++ I   G L I DV  
Sbjct: 524 FASIPSDMTVEVGTNVQLPCSSQGEPEPAITWNKDGVQVTESGKFHISPEGFLTINDVGT 583

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD--QPEDYEVEA---GQSATFRCNAVSD 334
           AD+G Y C ARN +G A  S  L+V  + H  D   P+   + A   G +A  R N  SD
Sbjct: 584 ADAGRYECVARNTIGYASVSMVLSVNGY-HYNDLVSPQYLSLIANLSGCTAHRRVNNCSD 642



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 136/308 (44%), Gaps = 11/308 (3%)

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAA--PYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           Q + TCE    +      +I    L    P  T EP+  +     TV F C+A G P+PE
Sbjct: 214 QAAATCEYPRRIQGRSVATITPEELNCERPRITSEPQDADVTSGNTVYFTCRAEGNPKPE 273

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV-YKDVYVNVL 215
           I W+ N   +S    +    +    + I+N +++D G Y C A N  G     +V +  L
Sbjct: 274 IIWLRNNNELSMKTDSRLNLLDDGTLMIQNTQEADEGVYQCMAKNVAGEAKTHEVTLRYL 333

Query: 216 AH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGD 271
                P     P++   + G++V L C   G P P++ W    +       R  I  +G 
Sbjct: 334 GSPARPTFVIQPQNTEVLVGESVTLECSATGHPLPQITWTRGDRTPLPIDPRVNITPSGG 393

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
           L I +VA +DSGEYTCFA N + +   +  + V+     T  P+   V  GQ+  F+C A
Sbjct: 394 LYIQNVAQSDSGEYTCFASNSVDSIHATAFIIVQALPQFTVTPQSRVVIEGQTVDFQCEA 453

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
              P  +  I W +G   +  +     + S   +L ++  +  D GQY C+A   +   +
Sbjct: 454 KGYP--QPVIAWTKGGSQLSVDRRHLVLSSG--TLRISGVALHDQGQYECQAVNIIGSQK 509

Query: 392 AQATLTVQ 399
             A LTVQ
Sbjct: 510 VVAHLTVQ 517


>gi|449498031|ref|XP_002195491.2| PREDICTED: peroxidasin homolog [Taeniopygia guttata]
          Length = 1431

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 176/360 (48%), Gaps = 17/360 (4%)

Query: 51  VELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           V   C   G P P+ IW ++   + +    R++  + G +L+I++ + +DQG Y C   N
Sbjct: 214 VYFTCRAEGNPKPEIIWLRNNNELSMKEDSRLNLLDDG-TLMIQNTQETDQGIYQCMAKN 272

Query: 109 GVGEAKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             GE K+  + L      A P F + P+       E+VT EC A+G P+P I W    + 
Sbjct: 273 VAGEVKTQEVTLRYFESPARPSFVIHPQNTEVLVGESVTLECSATGHPQPRITWTKGDR- 331

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            +  P +PR  + P+  + I+N+++ D+G Y C A+N++  ++   Y+ V A  P+ T  
Sbjct: 332 -TPLPNDPRVTITPSGGLYIQNVKQEDSGEYTCFASNTIDNIHATAYIIVQA-LPQFTVT 389

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSG 283
           P+D+  ++G+TV   C   G P+P + W     +L+   R+ +L +G L+I+ VA  D G
Sbjct: 390 PQDKTVIEGQTVDFPCEAQGYPQPVIAWTKGGGQLSVDRRHLVLSSGTLRISRVALHDQG 449

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +Y C A N +G+ +    LTV+          P D  VE G +    CNA  +P  +  I
Sbjct: 450 QYECQAVNIIGSQRIVVYLTVQPRVTPVFASVPSDMTVEVGTNVQIPCNAQGEP--EPVI 507

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            W    + +      +F  S +  LT+      D G+Y C A+  + +      L+V VP
Sbjct: 508 TW--NKDGVQVTESGKFHVSPEGFLTIRDVGTADEGRYECVARNTIGYSSVSMVLSVNVP 565



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 153/347 (44%), Gaps = 25/347 (7%)

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAA--PYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           Q + TCE    +      +I    L    P  T EP+ ++     TV F C+A G P+PE
Sbjct: 168 QAAATCEYPRRIQGRSVATITPEELNCERPRITSEPQDVDVTSGNTVYFTCRAEGNPKPE 227

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV-YKDVYVNVL 215
           I W+ N   +S    +    +    + I+N +++D G Y C A N  G V  ++V +   
Sbjct: 228 IIWLRNNNELSMKEDSRLNLLDDGTLMIQNTQETDQGIYQCMAKNVAGEVKTQEVTLRYF 287

Query: 216 AH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--RYTILETGD 271
                P     P++   + G++V L C   G P+P + W    +       R TI  +G 
Sbjct: 288 ESPARPSFVIHPQNTEVLVGESVTLECSATGHPQPRITWTKGDRTPLPNDPRVTITPSGG 347

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
           L I +V   DSGEYTCFA N +     +  + V+     T  P+D  V  GQ+  F C A
Sbjct: 348 LYIQNVKQEDSGEYTCFASNTIDNIHATAYIIVQALPQFTVTPQDKTVIEGQTVDFPCEA 407

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
              P  +  I W +G   +  +     + S   +L +++ +  D GQY C+A   +    
Sbjct: 408 QGYP--QPVIAWTKGGGQLSVDRRHLVLSSG--TLRISRVALHDQGQYECQAVNIIGSQR 463

Query: 392 AQATLTVQ-----VPLEAPSNFTL-----IQV-IDAK---KAVVSWN 424
               LTVQ     V    PS+ T+     +Q+  +A+   + V++WN
Sbjct: 464 IVVYLTVQPRVTPVFASVPSDMTVEVGTNVQIPCNAQGEPEPVITWN 510



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/265 (33%), Positives = 121/265 (45%), Gaps = 11/265 (4%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
            L  + V L C   G P P+  W+K D  P+    R++    G  L I++V+  D G YT
Sbjct: 304 VLVGESVTLECSATGHPQPRITWTKGDRTPLPNDPRVTITPSG-GLYIQNVKQEDSGEYT 362

Query: 104 CEVSNGVG--EAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVH 161
           C  SN +    A +Y I   V A P FTV P+     E +TV F C+A G P+P I W  
Sbjct: 363 CFASNTIDNIHATAYII---VQALPQFTVTPQDKTVIEGQTVDFPCEAQGYPQPVIAWTK 419

Query: 162 NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA-PE 220
            G  +S    +     G  RI+   L   D G Y C A N +G     VY+ V     P 
Sbjct: 420 GGGQLSVDRRHLVLSSGTLRISRVALH--DQGQYECQAVNIIGSQRIVVYLTVQPRVTPV 477

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
               P D     G  V + C   G P+P + W  +  ++T  G++ +   G L I DV  
Sbjct: 478 FASVPSDMTVEVGTNVQIPCNAQGEPEPVITWNKDGVQVTESGKFHVSPEGFLTIRDVGT 537

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTV 304
           AD G Y C ARN +G +  S  L+V
Sbjct: 538 ADEGRYECVARNTIGYSSVSMVLSV 562



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 14/181 (7%)

Query: 31  HAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR---ISQGNYGK 87
            A  Q  VT + +  +  + V+  C   G P P   W+K G  ++   R   +S G    
Sbjct: 381 QALPQFTVTPQDKTVIEGQTVDFPCEAQGYPQPVIAWTKGGGQLSVDRRHLVLSSG---- 436

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSV--LAAPYFTVEPEFINAAEEETVTF 145
           +L I  V   DQG Y C+  N +G ++   + L+V     P F   P  +       V  
Sbjct: 437 TLRISRVALHDQGQYECQAVNIIG-SQRIVVYLTVQPRVTPVFASVPSDMTVEVGTNVQI 495

Query: 146 ECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLG 204
            C A G PEP I W  +G  ++++    +  V P   +TI ++  +D G Y C A N++G
Sbjct: 496 PCNAQGEPEPVITWNKDGVQVTES---GKFHVSPEGFLTIRDVGTADEGRYECVARNTIG 552

Query: 205 Y 205
           Y
Sbjct: 553 Y 553


>gi|345323432|ref|XP_001509444.2| PREDICTED: receptor-type tyrosine-protein phosphatase F-like
           [Ornithorhynchus anatinus]
          Length = 1877

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 165/633 (26%), Positives = 260/633 (41%), Gaps = 57/633 (9%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEF 96
           + +V +        C   G P P+  W K G  ++ S R     +    G  L I+ +  
Sbjct: 15  EDQVGISGGVASFVCQASGEPKPRITWMKKGKKVS-SQRFEVIEFDDGSGSVLRIQPLRV 73

Query: 97  -SDQGSYTCEVSNGVGEAKSYSIDLSVL-------AAPYFTVEPEFINAAEEETVTFECK 148
             D+  Y C  +N VGE  + S  L+VL         P   + P+     +  T T  C 
Sbjct: 74  HRDEAIYECTATNSVGEINT-SAKLTVLEEDQLPHGFPTIDMGPQLKVVEKARTATMLCA 132

Query: 149 ASGLPEPEIHWVHNGKPISQAPPNPR-RKVGPNRITIENLRKSDTGNYGCNATNSLGYVY 207
           A G P+PEI W  +  P+  A  N R +++    + IEN  +SD G Y C ATN+ G  Y
Sbjct: 133 AGGNPDPEISWFKDFLPVDTATSNGRIKQLRSGALQIENSEESDQGKYECVATNAAGTRY 192

Query: 208 K---DVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRY 264
               ++YV V   AP  +  P +   + G +V LTC   GAP P V W+   +ELT    
Sbjct: 193 SAPANLYVRVRRVAPRFSIPPSNHEVMPGGSVNLTCVAVGAPMPYVKWMAGAEELTKEDE 252

Query: 265 TILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
             +    L++ ++    S  YTC A + LG  + +  +TVK       +P   E  A   
Sbjct: 253 MPVGRNVLELNNIVH--SANYTCVAISSLGMIEATAQITVKALPKPPSEPLVTETTATSV 310

Query: 325 ATFRCNAVSDPSLKLSI-----VWLRGSEPIDFESEPRFVQS-----NDYSLTVTKSSEL 374
                +  SDP     I      W    + ID  +  R+        ++Y   V   + +
Sbjct: 311 TLTWDSGNSDPISYYVIQYKPRSWDGQFQEIDGVATTRYSIGGLSPFSEYEFRVLAVNNI 370

Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
             G  +       D +EA+     Q P   P      +++ A   +V W P  P+   G 
Sbjct: 371 GRGPPS-------DLVEARTG--EQAPSSPPLKVQ-ARMLSASTMLVQWEP--PEEPNGQ 418

Query: 435 FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
            RGY+V   T+     +  +   N  +S  T V   +       RVLAF    +GPPS+I
Sbjct: 419 IRGYRVYYTTDSHLPLNSWQKH-NTDDSHLTTVGNLITGITYSIRVLAFTSVGDGPPSDI 477

Query: 495 ISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLE 554
           I   T +GVP      +A     +   L W+ P  P   ++ Y++ Y   +  K     +
Sbjct: 478 IQVKTQQGVPAQPADFQAEAESDTRILLTWLLP--PQERIIKYELLYWEGEDGK----QQ 531

Query: 555 RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA-----ESKYLFYVPFKNPDNVE 609
           ++ +  DPT++ A +  L+P T YR  LA  +  G G      E++     P   P  VE
Sbjct: 532 KVTF--DPTSSYA-VEDLKPDTLYRFSLAARSDMGVGVYTPTIETRTAQSTPSAPPQEVE 588

Query: 610 GRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
              ++   + +SW   P    N    +Y + ++
Sbjct: 589 CVSTSSTTIRVSWVPPPAPSRNGVITQYSVAYQ 621



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 140/533 (26%), Positives = 230/533 (43%), Gaps = 51/533 (9%)

Query: 122 VLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV---- 177
           +L+ P F   PE          +F C+ASG P+P I W+  GK +S      R +V    
Sbjct: 4   LLSKPTFIKIPEDQVGISGGVASFVCQASGEPKPRITWMKKGKKVSSQ----RFEVIEFD 59

Query: 178 --GPNRITIENLR-KSDTGNYGCNATNSLGYVYKDVYVNVLAHA------PEITEAPKDE 228
               + + I+ LR   D   Y C ATNS+G +     + VL         P I   P+ +
Sbjct: 60  DGSGSVLRIQPLRVHRDEAIYECTATNSVGEINTSAKLTVLEEDQLPHGFPTIDMGPQLK 119

Query: 229 YTVDGKTVVLTCRVFGAPKPEVNWIHN----QKELTGGRYTILETGDLKITDVAFADSGE 284
                +T  + C   G P PE++W  +        + GR   L +G L+I +   +D G+
Sbjct: 120 VVEKARTATMLCAAGGNPDPEISWFKDFLPVDTATSNGRIKQLRSGALQIENSEESDQGK 179

Query: 285 YTCFARNKLGTAQGS-GSLTVKEHT---HITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           Y C A N  GT   +  +L V+        +  P ++EV  G S    C AV  P     
Sbjct: 180 YECVATNAAGTRYSAPANLYVRVRRVAPRFSIPPSNHEVMPGGSVNLTCVAVGAP--MPY 237

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           + W+ G+E +  E E   V  N   L    ++ + S  YTC A + L  IEA A +TV+ 
Sbjct: 238 VKWMAGAEELTKEDE-MPVGRNVLEL----NNIVHSANYTCVAISSLGMIEATAQITVKA 292

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
            L  P +  L+    A    ++W+  +   +  +   YK ++W     +G  +E  ++  
Sbjct: 293 -LPKPPSEPLVTETTATSVTLTWDSGNSDPISYYVIQYKPRSW-----DGQFQE--IDGV 344

Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGT-VQSLEAIPLGSSA 519
            +T   +    P S+   RVLA N    GPPS+++   T E  P +    ++A  L +S 
Sbjct: 345 ATTRYSIGGLSPFSEYEFRVLAVNNIGRGPPSDLVEARTGEQAPSSPPLKVQARMLSAST 404

Query: 520 FYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYR 579
             ++W  PE+PNG + GY++ Y +     +    +     S  TT    + G+     Y 
Sbjct: 405 MLVQWEPPEEPNGQIRGYRVYYTTDSHLPLNSWQKHNTDDSHLTTVGNLITGI----TYS 460

Query: 580 IHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEGRGSTPNNLVISWTAMPE 627
           I +  +T  GDG  S  +       VP + P + +    +   ++++W   P+
Sbjct: 461 IRVLAFTSVGDGPPSDIIQVKTQQGVPAQ-PADFQAEAESDTRILLTWLLPPQ 512



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 129/573 (22%), Positives = 204/573 (35%), Gaps = 131/573 (22%)

Query: 212 VNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD 271
           + +L   P   + P+D+  + G      C+  G PKP + W+   K+++  R+ ++E  D
Sbjct: 1   MRLLLSKPTFIKIPEDQVGISGGVASFVCQASGEPKPRITWMKKGKKVSSQRFEVIEFDD 60

Query: 272 -----LKITDV-AFADSGEYTCFARNKLGTAQGSGSLTVKEHTH-------ITDQPEDYE 318
                L+I  +    D   Y C A N +G    S  LTV E          I   P+   
Sbjct: 61  GSGSVLRIQPLRVHRDEAIYECTATNSVGEINTSAKLTVLEEDQLPHGFPTIDMGPQLKV 120

Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSG 377
           VE  ++AT  C A  +P  ++S  W +   P+D   S  R  Q    +L +  S E D G
Sbjct: 121 VEKARTATMLCAAGGNPDPEIS--WFKDFLPVDTATSNGRIKQLRSGALQIENSEESDQG 178

Query: 378 QYTCRAQTELDF-IEAQATLTVQVPLEA------PSNFTLIQVIDAKKAVVSWNPVSPQS 430
           +Y C A         A A L V+V   A      PSN  ++         V+    +P  
Sbjct: 179 KYECVATNAAGTRYSAPANLYVRVRRVAPRFSIPPSNHEVMPGGSVNLTCVAVG--APMP 236

Query: 431 LRGHFRGYKVQTWTEKDGEG-SIREL--IVNKGESTTTEVDKF--VPASKNFARVLAFNG 485
                 G +  T  ++   G ++ EL  IV+    T   +     + A+           
Sbjct: 237 YVKWMAGAEELTKEDEMPVGRNVLELNNIVHSANYTCVAISSLGMIEATAQITV-----K 291

Query: 486 AYNGPPSE-IISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
           A   PPSE +++  T   V  T  S  + P+   ++Y+   KP   +G       ++Q +
Sbjct: 292 ALPKPPSEPLVTETTATSVTLTWDSGNSDPI---SYYVIQYKPRSWDG-------QFQEI 341

Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-----AESKYLFY 599
            G                 TT   + GL P ++Y   +      G G      E++    
Sbjct: 342 DGV---------------ATTRYSIGGLSPFSEYEFRVLAVNNIGRGPPSDLVEARTGEQ 386

Query: 600 VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF-----------WRRHNTGE 648
            P   P  V+ R  + + +++ W   P  E N     YR++           W++HNT  
Sbjct: 387 APSSPPLKVQARMLSASTMLVQWE--PPEEPNGQIRGYRVYYTTDSHLPLNSWQKHNT-- 442

Query: 649 AWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDK 708
               DD                                              S  T V  
Sbjct: 443 ----DD----------------------------------------------SHLTTVGN 452

Query: 709 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
            +       RVLAF    +GPPS+II   T +G
Sbjct: 453 LITGITYSIRVLAFTSVGDGPPSDIIQVKTQQG 485



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 138/650 (21%), Positives = 238/650 (36%), Gaps = 97/650 (14%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
           V L C+  G P+P   W      +   D +  G      +++        +YTC   + +
Sbjct: 224 VNLTCVAVGAPMPYVKWMAGAEELTKEDEMPVGRN----VLELNNIVHSANYTCVAISSL 279

Query: 111 GEAKSYSIDLSVLAAPYFTVEPEFI-NAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
           G  ++ +  ++V A P    EP      A   T+T++   SG  +P  ++V   KP S  
Sbjct: 280 GMIEA-TAQITVKALPKPPSEPLVTETTATSVTLTWD---SGNSDPISYYVIQYKPRSWD 335

Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLG-YVYKDVYVNVLAHAP--EITEAPK 226
                          + +    T  Y     +    Y ++ + VN +   P  ++ EA  
Sbjct: 336 G------------QFQEIDGVATTRYSIGGLSPFSEYEFRVLAVNNIGRGPPSDLVEART 383

Query: 227 DEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK---ELTGGR--YTI-----------LETG 270
            E       + +  R+  A    V W   ++   ++ G R  YT              T 
Sbjct: 384 GEQAPSSPPLKVQARMLSASTMLVQWEPPEEPNGQIRGYRVYYTTDSHLPLNSWQKHNTD 443

Query: 271 DLKITDVAFADSG---EYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
           D  +T V    +G        A   +G    S  + VK    +  QP D++ EA      
Sbjct: 444 DSHLTTVGNLITGITYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPADFQAEAESDTRI 503

Query: 328 RCNAVSDPS---LKLSIVWLRG----SEPIDFESEPRFVQSND-----YSLTVTKSSELD 375
               +  P    +K  +++  G     + + F+    +   +      Y  ++   S++ 
Sbjct: 504 LLTWLLPPQERIIKYELLYWEGEDGKQQKVTFDPTSSYAVEDLKPDTLYRFSLAARSDMG 563

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHF 435
            G YT   +T      AQ+T     P   P     +    +    VSW P    S  G  
Sbjct: 564 VGVYTPTIETRT----AQST-----PSAPPQEVECVST-SSTTIRVSWVPPPAPSRNGVI 613

Query: 436 RGYKVQTWTEKDGEGSIRELIVNKG-ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
             Y V  +   +GE   R ++   G ES++ E+      ++    V A      GP S  
Sbjct: 614 TQYSV-AYQATEGEDIARHVVDGIGRESSSWEIKDLEKWTEYKVWVRAHTDVGPGPESPP 672

Query: 495 ISFVTPEGVPGTV-QSLEAIPLGSSAFYLKWV--KPEQPNGVLMGYKIKYQSVKGT--KV 549
           +   T E VP    + +E   + S++  + W    P + +G + GY++ Y  ++    + 
Sbjct: 673 VRVRTDEDVPSAPPRKVEVESVNSTSIRVSWKVPLPNKQHGQIRGYQVTYVRLENNEPRG 732

Query: 550 GPLLERLPYIS------DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFK 603
            P+++ +          +  T    ++GL P T Y I +A YT  GDGA SK        
Sbjct: 733 QPVIKDVMLAEAQWRPEESETYETSISGLTPETTYSITVAAYTTKGDGARSK-------- 784

Query: 604 NPDNVEGRGSTPN--NLVISWTAM--------PEIEHNAPHFKYRIFWRR 643
            P  +   G+ P    ++IS TAM        P  E       YR+ +RR
Sbjct: 785 -PKIITTTGAVPGRPTMMISTTAMNTALIQWHPPKELPGELLGYRLKYRR 833



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 81/331 (24%), Positives = 131/331 (39%), Gaps = 40/331 (12%)

Query: 404 APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWT-----EKDGEGSIRELIV- 457
           AP     ++ +++    VSW    P    G  RGY+V T+      E  G+  I+++++ 
Sbjct: 684 APPRKVEVESVNSTSIRVSWKVPLPNKQHGQIRGYQV-TYVRLENNEPRGQPVIKDVMLA 742

Query: 458 ------NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLE 511
                  + E+  T +    P +     V A+    +G  S+     T   VPG    + 
Sbjct: 743 EAQWRPEESETYETSISGLTPETTYSITVAAYTTKGDGARSKPKIITTTGAVPGRPTMMI 802

Query: 512 AIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD--PTTTSAKL 569
           +    ++A  ++W  P++  G L+GY++KY+ V         E  P   D         +
Sbjct: 803 STTAMNTAL-IQWHPPKELPGELLGYRLKYRRVD--------EEKPNTMDFGKNDHHFTV 853

Query: 570 AGLEPSTKYRIHLAGYTKAGDGAESKYLFY----VPFKNPDNVEGRGSTPNNLVISWTAM 625
            GL   T Y   L+   KAG G E +        VP   P N+   G T +   ++W   
Sbjct: 854 TGLHKGTTYIFKLSAKNKAGPGEEVEKEIATQEDVPSGFPQNLRVVGLTTSTTEVTWDPP 913

Query: 626 PEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEK 685
              E N     Y + +R  ++     QD       + L L N      Y+IK V+  T K
Sbjct: 914 MLAERNGRITNYTVVYRDIDS----QQDLHNVTADTRLTLTNLRPDTTYDIK-VRARTNK 968

Query: 686 DGEGSIRELIVNKGESTTTEVDKFVPASKNF 716
            G G +   I    +S T  VD+    +KNF
Sbjct: 969 -GPGPLSPSI----QSRTVPVDQVF--AKNF 992


>gi|296224572|ref|XP_002758118.1| PREDICTED: peroxidasin homolog [Callithrix jacchus]
          Length = 1577

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 187/408 (45%), Gaps = 30/408 (7%)

Query: 51  VELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           V   C   G P P+ IW ++   + +    R++  + G +L+I++ + +DQG Y C   N
Sbjct: 361 VYFTCRAEGNPKPEIIWLRNNNELSMKTDSRLNLLDDG-TLMIQNTQETDQGIYQCMAKN 419

Query: 109 GVGEAKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             GE K+  + L      A P F ++P+       E+VT EC A+G P P I W      
Sbjct: 420 VAGEVKTQEVTLRYFGSPARPTFVIQPQNTEVLVGESVTLECSATGHPPPRISWTRGDH- 478

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            +  P +PR  + P+  + I+N+ + D+G Y C+ATNS+  V+   ++ V A  P+ T  
Sbjct: 479 -TPLPVDPRVNITPSGGLYIQNVVQEDSGEYACSATNSIDSVHATAFIIVQA-LPQFTVT 536

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSG 283
           P+D   ++G+TV   C   G P P + W     +L+   R+ +L +G L+I+ VA  D G
Sbjct: 537 PQDRVVIEGQTVDFQCEAKGNPPPVIAWTKGGSQLSVDRRHLVLSSGTLRISGVALHDQG 596

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +Y C A N +G+ +    LTV+          P D  VE G +    C++  +P  + +I
Sbjct: 597 QYECQAVNIIGSQKVVAHLTVQPRVTPVFASIPSDTTVEVGANVQLPCSSQGEP--EPAI 654

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV- 400
            W    + +      +F  S +  LT+      D+G+Y C A+  +        L+V V 
Sbjct: 655 TW--NKDGVQVTESGKFHISPEGFLTINDVGPADAGRYECVARNTIGAASVSMVLSVNVP 712

Query: 401 -------PLEAPSNFTLIQVID-----AKKAVVSWNPVSPQSLRGHFR 436
                  P  A S    I  +D      +  +    P SP  L   FR
Sbjct: 713 DVSRNGDPFVATSIVEAIATVDRAINSTRTHLFDSRPRSPNDLLALFR 760



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 125/279 (44%), Gaps = 9/279 (3%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T EP+  +     TV F C+A G P+PEI W+ N   +S    +    +    + I+
Sbjct: 344 PRITSEPQDADVTSGNTVYFTCRAEGNPKPEIIWLRNNNELSMKTDSRLNLLDDGTLMIQ 403

Query: 186 NLRKSDTGNYGCNATNSLGYV-YKDVYVNVLAHA--PEITEAPKDEYTVDGKTVVLTCRV 242
           N +++D G Y C A N  G V  ++V +        P     P++   + G++V L C  
Sbjct: 404 NTQETDQGIYQCMAKNVAGEVKTQEVTLRYFGSPARPTFVIQPQNTEVLVGESVTLECSA 463

Query: 243 FGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSG 300
            G P P ++W            R  I  +G L I +V   DSGEY C A N + +   + 
Sbjct: 464 TGHPPPRISWTRGDHTPLPVDPRVNITPSGGLYIQNVVQEDSGEYACSATNSIDSVHATA 523

Query: 301 SLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQ 360
            + V+     T  P+D  V  GQ+  F+C A  +P     I W +G   +  +   R + 
Sbjct: 524 FIIVQALPQFTVTPQDRVVIEGQTVDFQCEAKGNP--PPVIAWTKGGSQLSVDR--RHLV 579

Query: 361 SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            +  +L ++  +  D GQY C+A   +   +  A LTVQ
Sbjct: 580 LSSGTLRISGVALHDQGQYECQAVNIIGSQKVVAHLTVQ 618



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 118/264 (44%), Gaps = 11/264 (4%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           L  + V L C   G P P+  W++ D  P+    R++    G  L I++V   D G Y C
Sbjct: 452 LVGESVTLECSATGHPPPRISWTRGDHTPLPVDPRVNITPSG-GLYIQNVVQEDSGEYAC 510

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
             +N +    + +  + V A P FTV P+     E +TV F+C+A G P P I W   G 
Sbjct: 511 SATNSIDSVHATAF-IIVQALPQFTVTPQDRVVIEGQTVDFQCEAKGNPPPVIAWTKGGS 569

Query: 165 PISQAPPNPRRK--VGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA-PEI 221
            +S      RR   +    + I  +   D G Y C A N +G      ++ V     P  
Sbjct: 570 QLSVD----RRHLVLSSGTLRISGVALHDQGQYECQAVNIIGSQKVVAHLTVQPRVTPVF 625

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
              P D     G  V L C   G P+P + W  +  ++T  G++ I   G L I DV  A
Sbjct: 626 ASIPSDTTVEVGANVQLPCSSQGEPEPAITWNKDGVQVTESGKFHISPEGFLTINDVGPA 685

Query: 281 DSGEYTCFARNKLGTAQGSGSLTV 304
           D+G Y C ARN +G A  S  L+V
Sbjct: 686 DAGRYECVARNTIGAASVSMVLSV 709



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 12/185 (6%)

Query: 35  QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR---ISQGNYGKSLII 91
           Q  VT +  V +  + V+  C   G P P   W+K G  ++   R   +S G    +L I
Sbjct: 532 QFTVTPQDRVVIEGQTVDFQCEAKGNPPPVIAWTKGGSQLSVDRRHLVLSSG----TLRI 587

Query: 92  KHVEFSDQGSYTCEVSNGVGEAKSYS-IDLSVLAAPYFTVEPEFINAAEEETVTFECKAS 150
             V   DQG Y C+  N +G  K  + + +     P F   P          V   C + 
Sbjct: 588 SGVALHDQGQYECQAVNIIGSQKVVAHLTVQPRVTPVFASIPSDTTVEVGANVQLPCSSQ 647

Query: 151 GLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKD 209
           G PEP I W  +G  ++++    +  + P   +TI ++  +D G Y C A N++G     
Sbjct: 648 GEPEPAITWNKDGVQVTES---GKFHISPEGFLTINDVGPADAGRYECVARNTIGAASVS 704

Query: 210 VYVNV 214
           + ++V
Sbjct: 705 MVLSV 709


>gi|339247417|ref|XP_003375342.1| putative fibronectin type III domain protein [Trichinella spiralis]
 gi|316971327|gb|EFV55122.1| putative fibronectin type III domain protein [Trichinella spiralis]
          Length = 954

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/350 (34%), Positives = 170/350 (48%), Gaps = 40/350 (11%)

Query: 67  WSKDGVPINPSDRISQG-NYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           W K    I+P  R++ G ++ KSL+I+ V+F D+G Y C   +      S  + ++V AA
Sbjct: 210 WRKVNGVIDPR-RVNWGTDFKKSLLIQDVDFHDEGDYECFFPSM--PELSRRLKVNVHAA 266

Query: 126 PYFTVE--PEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           PY+ VE  P   N++E E+V F C A G P P I +  NG  I    P+ R  +    +T
Sbjct: 267 PYW-VEGPPPSQNSSEGESVEFRCNARGKPTPNITFYKNGHKIV---PDDRYSIDGEVLT 322

Query: 184 IENLRKS-----DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVL 238
           I+NLRK+     D   Y C A N+ GYV+ + Y+N+L+    I E P +   V G+  V 
Sbjct: 323 IQNLRKAPDGAGDNAVYQCKAENAYGYVWANFYLNILSFPAVILEGPGNREAVVGQRSVH 382

Query: 239 TCRVFGAPKPEVNWIHNQKELTGG--RYTILET---GDLKITDVAFADSGEYTCFARNKL 293
            CRVFG+PKP++ W      LTG   RYT L      +L + +V       + C A NK 
Sbjct: 383 KCRVFGSPKPKIEW--RSPVLTGALYRYTPLNAEGISELVLYEVDKKHEASFECHASNKY 440

Query: 294 GTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFE 353
           G A   GSL V+                G S    C A  D  LK+   WL    P+   
Sbjct: 441 GEASEIGSLVVR----------------GNSIQLPCKAYHDNLLKVKYTWLIDGIPLG-N 483

Query: 354 SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-VPL 402
            +P      +Y+L +      DS  YTC A+T+LD  E  AT+ V+ VPL
Sbjct: 484 LQPHIKVDENYTLIIENPKASDSADYTCVAETKLDKAERVATILVKDVPL 533



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 102/199 (51%), Gaps = 6/199 (3%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW--TEKDGEGSIRELIVN 458
           P EAP NF L+ V+    A  +W+PV P SL G+F+GYK+  W  T K  +   +E + +
Sbjct: 740 PDEAPKNFRLVNVVAPTVATFAWDPVDPASLHGNFKGYKIVHWHDTGKRSDPVKKESLFD 799

Query: 459 KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSS 518
              S  T  D   P   N+A V A N AY+ PPS+ I F  PEGVP  VQSL A PL   
Sbjct: 800 SSASQGTVYD-LKPFRVNYAEVYAANDAYDSPPSQRIRFDMPEGVPSQVQSLSAFPLSHR 858

Query: 519 AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLER---LPYISDPTTTSAKLAGLEPS 575
              + W  P + NG L+GY + Y  +  +K G        +  + D      ++ GL+  
Sbjct: 859 EIGVIWKPPREYNGHLIGYNLSYCLLSESKSGASFADGSCMYRMYDVDVNHERIHGLKAE 918

Query: 576 TKYRIHLAGYTKAGDGAES 594
           ++YR+ + G T AG G  S
Sbjct: 919 SEYRVEMRGVTNAGLGDPS 937



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 135/610 (22%), Positives = 227/610 (37%), Gaps = 99/610 (16%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGS-----YT 103
           + VE  C   G P P   + K+G  I P DR S    G+ L I+++  +  G+     Y 
Sbjct: 283 ESVEFRCNARGKPTPNITFYKNGHKIVPDDRYSID--GEVLTIQNLRKAPDGAGDNAVYQ 340

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECKASGLPEPEIHW--- 159
           C+  N  G   + +  L++L+ P   +E P    A   +    +C+  G P+P+I W   
Sbjct: 341 CKAENAYGYVWA-NFYLNILSFPAVILEGPGNREAVVGQRSVHKCRVFGSPKPKIEWRSP 399

Query: 160 VHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
           V  G      P N     G + + +  + K    ++ C+A+N  G             A 
Sbjct: 400 VLTGALYRYTPLNAE---GISELVLYEVDKKHEASFECHASNKYG------------EAS 444

Query: 220 EITEAPKDEYTVDGKTVVLTCRVF--GAPKPEVNWIHNQKELTGGR--YTILETGDLKIT 275
           EI         V G ++ L C+ +     K +  W+ +   L   +    + E   L I 
Sbjct: 445 EIGSL-----VVRGNSIQLPCKAYHDNLLKVKYTWLIDGIPLGNLQPHIKVDENYTLIIE 499

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQ-SATFRCNAVSD 334
           +   +DS +YTC A  KL  A+   ++ VK+   +   P    V   + +A  R      
Sbjct: 500 NPKASDSADYTCVAETKLDKAERVATILVKD---VPLPPFFVGVTCSERNAAVRFQHRDR 556

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQ--SND--------YSLTVTKSSELD--------- 375
           P         R + P+    E  +VQ  SND        Y + VT  ++ D         
Sbjct: 557 P---------RTAAPV----ESFWVQYNSNDAEPDAWHIYPVPVTTRADKDWWTITVPLH 603

Query: 376 -SGQYTCRA-------QTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVS 427
             G ++ RA        +       Q T    +P   P+N  +++       VVSW+PV 
Sbjct: 604 PWGNFSFRAVARNEVGDSAPSLASTQCTTAAALPELNPAN-VVVRGTSPDNLVVSWDPVE 662

Query: 428 PQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF----ARVLAF 483
                G    Y V+     D +      IV    +   E    VP    +     RV + 
Sbjct: 663 RVDWNGPDFHYVVEMKRADDDDSRWETAIV----TDPNESQLVVPDQPTYEPYDVRVQSA 718

Query: 484 N--GAYNGPPSEIISFV---TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
           N  G     P+ +  +     P+  P   + +  +    + F    V P   +G   GYK
Sbjct: 719 NSLGKATVSPATVRGYSGEGYPDEAPKNFRLVNVVAPTVATFAWDPVDPASLHGNFKGYK 778

Query: 539 IKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF 598
           I +    G +  P+ +    + D + +   +  L+P   +R++ A    A D  +S    
Sbjct: 779 IVHWHDTGKRSDPVKKE--SLFDSSASQGTVYDLKP---FRVNYAEVYAANDAYDSPPSQ 833

Query: 599 YVPFKNPDNV 608
            + F  P+ V
Sbjct: 834 RIRFDMPEGV 843



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 52/80 (65%), Gaps = 1/80 (1%)

Query: 600 VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEA-WNQDDVLDW 658
           +P  NP NV  RG++P+NLV+SW  +  ++ N P F Y +  +R +  ++ W    V D 
Sbjct: 636 LPELNPANVVVRGTSPDNLVVSWDPVERVDWNGPDFHYVVEMKRADDDDSRWETAIVTDP 695

Query: 659 RQSELVLANQPTFQPYEIKV 678
            +S+LV+ +QPT++PY+++V
Sbjct: 696 NESQLVVPDQPTYEPYDVRV 715



 Score = 44.3 bits (103), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 4/92 (4%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN---PSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           K+    C   G P     W KDGVP+N    +DR +      + I+  +   D+G Y C 
Sbjct: 37  KERRFLCKASGYPSVSYRWLKDGVPLNFEELNDRATSVPGEGTFILSKLRLEDEGIYQCI 96

Query: 106 VSNGVGEAKSYSIDLSVLAAPYF-TVEPEFIN 136
             NG G A    I L      YF   EPE I+
Sbjct: 97  AENGNGSAYDREIVLRRTFMSYFPKSEPEIID 128



 Score = 39.3 bits (90), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 145 FECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT--IENLRKSDTGNYGCNATNS 202
           F CKASG P     W+ +G P++    N R    P   T  +  LR  D G Y C A N 
Sbjct: 41  FLCKASGYPSVSYRWLKDGVPLNFEELNDRATSVPGEGTFILSKLRLEDEGIYQCIAENG 100

Query: 203 LGYVY 207
            G  Y
Sbjct: 101 NGSAY 105


>gi|395831457|ref|XP_003788818.1| PREDICTED: receptor-type tyrosine-protein phosphatase S isoform 1
           [Otolemur garnettii]
          Length = 1910

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 170/630 (26%), Positives = 264/630 (41%), Gaps = 51/630 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEF 96
           K ++ +        C   G P P+  W+K G  +N S R     +    G  L I+ +  
Sbjct: 40  KDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVN-SQRFETIEFDESAGAVLRIQPLRT 98

Query: 97  -SDQGSYTCEVSNGVGEAKSYSIDLSVL-------AAPYFTVEPEFINAAEEETVTFECK 148
             D+  Y C   N VGE   ++  L+VL         P   + P+        T T  C 
Sbjct: 99  PRDENVYECVAQNSVGEITVHA-KLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCA 157

Query: 149 ASGLPEPEIHWVHNGKPISQAPPNPR-RKVGPNRITIENLRKSDTGNYGCNATNSLGYVY 207
           ASG P+PEI W  +  P+  +  N R +++    + IE+  ++D G Y C ATNS G  Y
Sbjct: 158 ASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRY 217

Query: 208 K---DVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRY 264
               ++YV V   AP  +  P     + G  V +TC   G+P P V W+   ++LT    
Sbjct: 218 SSPANLYVRVRRVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDD 277

Query: 265 TILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
             +    L++TDV   DS  YTC A + LG  +    +TVK        P   E  A   
Sbjct: 278 MPVGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITVKSLPKAPGTPVVTENTATSI 335

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSE--PIDFESEPRFVQSNDYSL-TVTKSSELDSGQYTC 381
                +   DP     I +   S+  P   + +   + +  YS+  ++ +SE +      
Sbjct: 336 TITWDSGNPDPVSYYVIEYKSKSQDGPYQIKED---ITTTRYSIGGLSPNSEYEIWVSAV 392

Query: 382 RAQTELDFIEAQATLT-VQVPLEAPSNFTLIQVIDAKKAVVSW-NPVSPQSLRGHFRGYK 439
            +  +    E+  T T  Q P  AP N    +++ A   +V W  PV P  L    RGY+
Sbjct: 393 NSIGQGPPSESVVTRTGEQAPASAPRNVQ-ARMLSATTMIVQWEEPVEPNGL---IRGYR 448

Query: 440 VQTWTEKDGE-GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
           V    E +   G+ ++   N  +S  T V   +       RVLAF    +GP S+ I   
Sbjct: 449 VYYTMEPEHPVGNWQKH--NVDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLSDPIQVK 506

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSV-KGTKVGPLLERLP 557
           T +GVPG   +L A     ++  L W  P Q +  ++ Y++ ++    G ++G       
Sbjct: 507 TQQGVPGQPMNLRAEAKSETSITLSWSPPRQES--IVKYELLFREADHGREMGRTF---- 560

Query: 558 YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA-----ESKYLFYVPFKNPDNVEGRG 612
              DP TTS  +  L+P T+Y   LA  +  G GA       + L   P   P +V+   
Sbjct: 561 ---DP-TTSFVVDDLKPDTEYAFRLAARSPQGLGAFTSVVRQRTLQSKPSAPPQDVKCVS 616

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
                +++SW   P   HN P   Y + +R
Sbjct: 617 MRSTAILVSWRPPPPETHNGPLVGYSVRYR 646



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 142/550 (25%), Positives = 229/550 (41%), Gaps = 57/550 (10%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR-------KVG 178
           P F  EP+          +F C+A+G P+P + W   GK +     N +R       +  
Sbjct: 33  PRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKV-----NSQRFETIEFDESA 87

Query: 179 PNRITIENLRK-SDTGNYGCNATNSLGYVYKDVYVNVLAHA------PEITEAPKDEYTV 231
              + I+ LR   D   Y C A NS+G +     + VL         P I   P+ +   
Sbjct: 88  GAVLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVE 147

Query: 232 DGKTVVLTCRVFGAPKPEVNWIHN----QKELTGGRYTILETGDLKITDVAFADSGEYTC 287
             +T  + C   G P PE+ W  +        + GR   L +G L+I      D G+Y C
Sbjct: 148 RTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYEC 207

Query: 288 FARNKLGTAQGS-GSLTVKEHT---HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVW 343
            A N  G    S  +L V+        +  P  +E+  G +    C AV  P   +   W
Sbjct: 208 VATNSAGVRYSSPANLYVRVRRVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVK--W 265

Query: 344 LRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE 403
           ++G+E +  E +   V  N   LT  K    DS  YTC A + L  IEA A +TV+   +
Sbjct: 266 MQGAEDLTPEDD-MPVGRNVLELTDVK----DSANYTCVAMSSLGVIEAVAQITVKSLPK 320

Query: 404 APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGEST 463
           AP    + +   A    ++W+  +P  +  +   YK ++   +DG   I+E I     +T
Sbjct: 321 APGTPVVTENT-ATSITITWDSGNPDPVSYYVIEYKSKS---QDGPYQIKEDIT----TT 372

Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYL 522
              +    P S+    V A N    GPPSE +   T E  P +  ++++A  L ++   +
Sbjct: 373 RYSIGGLSPNSEYEIWVSAVNSIGQGPPSESVVTRTGEQAPASAPRNVQARMLSATTMIV 432

Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
           +W +P +PNG++ GY++ Y       VG   +    + D   T+  +  L     Y + +
Sbjct: 433 QWEEPVEPNGLIRGYRVYYTMEPEHPVGNWQKH--NVDDSLLTT--VGSLLEDETYTVRV 488

Query: 583 AGYTKAGDGAES-----KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKY 637
             +T  GDG  S     K    VP   P N+     +  ++ +SW+  P  E      KY
Sbjct: 489 LAFTSVGDGPLSDPIQVKTQQGVP-GQPMNLRAEAKSETSITLSWSP-PRQESIV---KY 543

Query: 638 RIFWRRHNTG 647
            + +R  + G
Sbjct: 544 ELLFREADHG 553



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 170/703 (24%), Positives = 271/703 (38%), Gaps = 84/703 (11%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS---DRISQGNYGKSLIIKHVEFSDQ 99
           +V  R +   + C   G P P+  W KD +P++PS    RI Q   G +L I+  E +DQ
Sbjct: 144 KVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSG-ALQIESSEETDQ 202

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLA---APYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           G Y C  +N  G   S   +L V     AP F++ P          V   C A G P P 
Sbjct: 203 GKYECVATNSAGVRYSSPANLYVRVRRVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPY 262

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV--YKDVYVNV 214
           + W+   + ++   P     VG N + + +++  D+ NY C A +SLG +     + V  
Sbjct: 263 VKWMQGAEDLT---PEDDMPVGRNVLELTDVK--DSANYTCVAMSSLGVIEAVAQITVKS 317

Query: 215 LAHAPE---ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETG 270
           L  AP    +TE      T+   +        G P P   ++   K  +  G Y I E  
Sbjct: 318 LPKAPGTPVVTENTATSITITWDS--------GNPDPVSYYVIEYKSKSQDGPYQIKE-- 367

Query: 271 DLKITDVA---FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
           D+  T  +    + + EY  +        QG  S +V   T           +A  SA  
Sbjct: 368 DITTTRYSIGGLSPNSEYEIWVSAVNSIGQGPPSESVVTRTG---------EQAPASAPR 418

Query: 328 RCNAVSDPSLKLSIVWLRGSEP--------IDFESEPRFVQSN------DYSLTVTKSSE 373
              A    +  + + W    EP        + +  EP     N      D SL  T  S 
Sbjct: 419 NVQARMLSATTMIVQWEEPVEPNGLIRGYRVYYTMEPEHPVGNWQKHNVDDSLLTTVGSL 478

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEA-----PSNFTLIQVIDAKKAVVSWNPVSP 428
           L+   YT R        +   +  +QV  +      P N    +        +SW+P   
Sbjct: 479 LEDETYTVRVLAFTSVGDGPLSDPIQVKTQQGVPGQPMNLR-AEAKSETSITLSWSPPRQ 537

Query: 429 QSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
           +S+       K +    +   G  RE+      +T+  VD   P ++   R+ A +    
Sbjct: 538 ESI------VKYELLFREADHG--REMGRTFDPTTSFVVDDLKPDTEYAFRLAARSPQGL 589

Query: 489 GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVK 545
           G  + ++   T +  P    Q ++ + + S+A  + W  P  E  NG L+GY ++Y+S+ 
Sbjct: 590 GAFTSVVRQRTLQSKPSAPPQDVKCVSMRSTAILVSWRPPPPETHNGPLVGYSVRYRSLG 649

Query: 546 GTKVGPL-LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY----- 599
                P  +  +P    PTTT   L  LE  T+YRI    +T+ G G ES  +       
Sbjct: 650 SEDPEPKEVNGIP----PTTTQILLEALEKWTEYRITTVAHTEVGPGPESSPVVIRTDED 705

Query: 600 VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ---DDVL 656
           VP   P  VE        + + W +      +     Y++ + R    EA       DV+
Sbjct: 706 VPSAPPRKVEAEALNATAIRVLWRSPAPGRQHGQIRGYQVHYVRMEGAEAHGPPRIKDVM 765

Query: 657 DWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKG 699
                E+++ N      Y I V     + DG  S  +++V KG
Sbjct: 766 LADAQEMIITNLEPETAYSITVAAYTMKGDGARSKPKVVVTKG 808



 Score = 43.5 bits (101), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 16/196 (8%)

Query: 437  GYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS 496
            GY++Q   E     +  E + ++   T + V K   A+  F       G      +E++S
Sbjct: 843  GYRLQFGREDSSPLATLEFLPSEDHYTASGVHKG--ATYVFRLAARSRGGLGEEAAEVLS 900

Query: 497  FVTPEGVP-GTVQSLEAIPLGSSA-FYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPL 552
               PE  P G  Q LEA    S+    L+W+ P   + NG ++ Y +  +  +   +GP 
Sbjct: 901  I--PEDTPRGHPQILEAAGNASAGTVLLRWLPPVPAERNGAIVKYTVAVR--EAGALGPA 956

Query: 553  LE-RLPYISDPTTTSA-KLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFK----NPD 606
             E  LP  ++P   +   L GL+P T Y + +  +T+ G G  S  + Y  F     +P 
Sbjct: 957  RETELPAAAEPGAENVLTLQGLKPDTAYDLQVRAHTRRGPGPFSPPVRYRTFLRDQVSPK 1016

Query: 607  NVEGRGSTPNNLVISW 622
            N + +     ++++SW
Sbjct: 1017 NFKVKMIMKTSVLLSW 1032


>gi|68533593|gb|AAH98579.1| PXDN protein, partial [Homo sapiens]
          Length = 722

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 194/426 (45%), Gaps = 30/426 (7%)

Query: 51  VELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           V   C   G P P+ IW ++   + +    R++  + G +L+I++ + +DQG Y C   N
Sbjct: 258 VYFTCRAEGNPKPEIIWLRNNNELSMKTDSRLNLLDDG-TLMIQNTQETDQGIYQCMAKN 316

Query: 109 GVGEAKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             GE K+  + L      A P F ++P+       E+VT EC A+G P P I W    + 
Sbjct: 317 VAGEVKTQEVTLRYFGSPARPTFVIQPQNTEVLVGESVTLECSATGHPPPRISWTRGDR- 375

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            +  P +PR  + P+  + I+N+ + D+G Y C+ATN++  V+   ++ V A  P+ T  
Sbjct: 376 -TPLPVDPRVNITPSGGLYIQNVVQGDSGEYACSATNNIDSVHATAFIIVQA-LPQFTVT 433

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSG 283
           P+D   ++G+TV   C   G P P + W     +L+   R+ +L +G L+I+ VA  D G
Sbjct: 434 PQDRVVIEGQTVDFQCEAKGNPPPVIAWTKGGSQLSVDRRHLVLSSGTLRISGVALHDQG 493

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +Y C A N +G+ +    LTV+          P D  VE G +    C++  +P  + +I
Sbjct: 494 QYECQAVNIIGSQKVVAHLTVQPRVTPVFASIPSDTTVEVGANVQLPCSSQGEP--EPAI 551

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV- 400
            W    + +      +F  S +  LT+      D+G+Y C A+  +        L+V V 
Sbjct: 552 TW--NKDGVQVTESGKFHISPEGFLTINDVGPADAGRYECVARNTIGSASVSMVLSVNVP 609

Query: 401 -------PLEAPSNFTLIQVID-----AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
                  P  A S    I  +D      +  +    P SP  L   FR  +     E+  
Sbjct: 610 DVSRNGDPFVATSIVEAIATVDRAINSTRTHLFDSRPRSPNDLLALFRYPRDPYTVEQAR 669

Query: 449 EGSIRE 454
            G I E
Sbjct: 670 AGEIFE 675



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 125/279 (44%), Gaps = 9/279 (3%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T EP+  +     TV F C+A G P+PEI W+ N   +S    +    +    + I+
Sbjct: 241 PRITSEPQDADVTSGNTVYFTCRAEGNPKPEIIWLRNNNELSMKTDSRLNLLDDGTLMIQ 300

Query: 186 NLRKSDTGNYGCNATNSLGYV-YKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRV 242
           N +++D G Y C A N  G V  ++V +        P     P++   + G++V L C  
Sbjct: 301 NTQETDQGIYQCMAKNVAGEVKTQEVTLRYFGSPARPTFVIQPQNTEVLVGESVTLECSA 360

Query: 243 FGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSG 300
            G P P ++W    +       R  I  +G L I +V   DSGEY C A N + +   + 
Sbjct: 361 TGHPPPRISWTRGDRTPLPVDPRVNITPSGGLYIQNVVQGDSGEYACSATNNIDSVHATA 420

Query: 301 SLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQ 360
            + V+     T  P+D  V  GQ+  F+C A  +P     I W +G   +  +     + 
Sbjct: 421 FIIVQALPQFTVTPQDRVVIEGQTVDFQCEAKGNP--PPVIAWTKGGSQLSVDRRHLVLS 478

Query: 361 SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           S   +L ++  +  D GQY C+A   +   +  A LTVQ
Sbjct: 479 SG--TLRISGVALHDQGQYECQAVNIIGSQKVVAHLTVQ 515



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 119/263 (45%), Gaps = 9/263 (3%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           L  + V L C   G P P+  W++ D  P+    R++    G  L I++V   D G Y C
Sbjct: 349 LVGESVTLECSATGHPPPRISWTRGDRTPLPVDPRVNITPSG-GLYIQNVVQGDSGEYAC 407

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
             +N +    + +  + V A P FTV P+     E +TV F+C+A G P P I W   G 
Sbjct: 408 SATNNIDSVHATAF-IIVQALPQFTVTPQDRVVIEGQTVDFQCEAKGNPPPVIAWTKGG- 465

Query: 165 PISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA-PEIT 222
             SQ   + R  V     + I  +   D G Y C A N +G      ++ V     P   
Sbjct: 466 --SQLSVDRRHLVLSSGTLRISGVALHDQGQYECQAVNIIGSQKVVAHLTVQPRVTPVFA 523

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
             P D     G  V L C   G P+P + W  +  ++T  G++ I   G L I DV  AD
Sbjct: 524 SIPSDTTVEVGANVQLPCSSQGEPEPAITWNKDGVQVTESGKFHISPEGFLTINDVGPAD 583

Query: 282 SGEYTCFARNKLGTAQGSGSLTV 304
           +G Y C ARN +G+A  S  L+V
Sbjct: 584 AGRYECVARNTIGSASVSMVLSV 606



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 12/189 (6%)

Query: 31  HAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR---ISQGNYGK 87
            A  Q  VT +  V +  + V+  C   G P P   W+K G  ++   R   +S G    
Sbjct: 425 QALPQFTVTPQDRVVIEGQTVDFQCEAKGNPPPVIAWTKGGSQLSVDRRHLVLSSG---- 480

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-IDLSVLAAPYFTVEPEFINAAEEETVTFE 146
           +L I  V   DQG Y C+  N +G  K  + + +     P F   P          V   
Sbjct: 481 TLRISGVALHDQGQYECQAVNIIGSQKVVAHLTVQPRVTPVFASIPSDTTVEVGANVQLP 540

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGY 205
           C + G PEP I W  +G  ++++    +  + P   +TI ++  +D G Y C A N++G 
Sbjct: 541 CSSQGEPEPAITWNKDGVQVTES---GKFHISPEGFLTINDVGPADAGRYECVARNTIGS 597

Query: 206 VYKDVYVNV 214
               + ++V
Sbjct: 598 ASVSMVLSV 606



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 2/79 (2%)

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           E   IT +P+D +V +G +  F C A  +P  K  I+WLR +  +  +++ R    +D +
Sbjct: 239 ERPRITSEPQDADVTSGNTVYFTCRAEGNP--KPEIIWLRNNNELSMKTDSRLNLLDDGT 296

Query: 366 LTVTKSSELDSGQYTCRAQ 384
           L +  + E D G Y C A+
Sbjct: 297 LMIQNTQETDQGIYQCMAK 315


>gi|194680924|ref|XP_593953.4| PREDICTED: peroxidasin homolog [Bos taurus]
          Length = 1417

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 192/422 (45%), Gaps = 30/422 (7%)

Query: 55  CIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
           C   G P P+ IW ++   + +    R++  + G +L+I++   +DQG Y C   N  GE
Sbjct: 206 CRAEGNPKPEIIWLRNNNELSMKTDSRLNLLDDG-TLMIQNTRETDQGIYQCMAKNVAGE 264

Query: 113 AKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            K+  + L      A P F ++P+       E+VT EC A+G P P+I W    +  S  
Sbjct: 265 VKTQEVTLRYFRSPARPAFVIQPQNTEVLVGESVTLECSATGHPPPQITWTRGDR--SPV 322

Query: 170 PPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
           P +PR  + P+  + I+N+ + D+G Y C A+N++  ++   ++ V A  P+ T  P+D 
Sbjct: 323 PTDPRVSITPSGGLYIQNVEQEDSGEYACFASNTVDSIHATAFIIVQA-LPQFTVTPQDR 381

Query: 229 YTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSGEYTC 287
             ++G+TV   C   G P+P + W     +L+   R+ +L +G L+I  VA  D G+Y C
Sbjct: 382 AVIEGQTVEFHCEAKGYPQPVIAWTKGGSQLSVDRRHLVLSSGTLRILAVALHDQGQYEC 441

Query: 288 FARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLR 345
            A N +G+ + +  LTV+       T  P D  VE G +    C    +P  + ++ W  
Sbjct: 442 QAVNIIGSQRVAAHLTVQPRVTPVFTSVPRDMTVEVGSNVQLPCRPQGEP--EPAVTW-- 497

Query: 346 GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV----- 400
             + +      +F  S +  LT+      D+G+Y C A+  +        L+V V     
Sbjct: 498 NKDGVQVTESGKFHISPEGFLTIRDVGTADAGRYECVARNTIGQASVSMVLSVNVPDVSR 557

Query: 401 ---PLEAPSNFTLIQVID-----AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSI 452
              P  A S    I  +D      +  +    P SP  L   FR  +     E+   G I
Sbjct: 558 NGDPFVATSIVEAIATVDRAINSTRTHLFDSRPRSPNDLLALFRYPRDPYTVEQARAGEI 617

Query: 453 RE 454
            E
Sbjct: 618 FE 619



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/262 (35%), Positives = 121/262 (46%), Gaps = 7/262 (2%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           L  + V L C   G P PQ  W++ D  P+    R+S    G  L I++VE  D G Y C
Sbjct: 293 LVGESVTLECSATGHPPPQITWTRGDRSPVPTDPRVSITPSG-GLYIQNVEQEDSGEYAC 351

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
             SN V    + +  + V A P FTV P+     E +TV F C+A G P+P I W   G 
Sbjct: 352 FASNTVDSIHATAF-IIVQALPQFTVTPQDRAVIEGQTVEFHCEAKGYPQPVIAWTKGGS 410

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA-PEITE 223
            +S    +     G  RI    L   D G Y C A N +G      ++ V     P  T 
Sbjct: 411 QLSVDRRHLVLSSGTLRILAVALH--DQGQYECQAVNIIGSQRVAAHLTVQPRVTPVFTS 468

Query: 224 APKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADS 282
            P+D     G  V L CR  G P+P V W  +  ++T  G++ I   G L I DV  AD+
Sbjct: 469 VPRDMTVEVGSNVQLPCRPQGEPEPAVTWNKDGVQVTESGKFHISPEGFLTIRDVGTADA 528

Query: 283 GEYTCFARNKLGTAQGSGSLTV 304
           G Y C ARN +G A  S  L+V
Sbjct: 529 GRYECVARNTIGQASVSMVLSV 550



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 134/308 (43%), Gaps = 11/308 (3%)

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAA--PYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           Q + TCE    +      +I    L    P  T EP+  +     TV F C+A G P+PE
Sbjct: 156 QAAATCEYPRRIQGRSVATITPEELDCERPRITSEPQDADVTLGNTVFFTCRAEGNPKPE 215

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV-YKDVYVNVL 215
           I W+ N   +S    +    +    + I+N R++D G Y C A N  G V  ++V +   
Sbjct: 216 IIWLRNNNELSMKTDSRLNLLDDGTLMIQNTRETDQGIYQCMAKNVAGEVKTQEVTLRYF 275

Query: 216 AH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGD 271
                P     P++   + G++V L C   G P P++ W    +    T  R +I  +G 
Sbjct: 276 RSPARPAFVIQPQNTEVLVGESVTLECSATGHPPPQITWTRGDRSPVPTDPRVSITPSGG 335

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
           L I +V   DSGEY CFA N + +   +  + V+     T  P+D  V  GQ+  F C A
Sbjct: 336 LYIQNVEQEDSGEYACFASNTVDSIHATAFIIVQALPQFTVTPQDRAVIEGQTVEFHCEA 395

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
              P  +  I W +G   +  +     + S   +L +   +  D GQY C+A   +    
Sbjct: 396 KGYP--QPVIAWTKGGSQLSVDRRHLVLSSG--TLRILAVALHDQGQYECQAVNIIGSQR 451

Query: 392 AQATLTVQ 399
             A LTVQ
Sbjct: 452 VAAHLTVQ 459


>gi|297470507|ref|XP_002683994.1| PREDICTED: peroxidasin homolog [Bos taurus]
 gi|296491763|tpg|DAA33796.1| TPA: peroxidasin homolog [Bos taurus]
          Length = 1475

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 192/422 (45%), Gaps = 30/422 (7%)

Query: 55  CIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
           C   G P P+ IW ++   + +    R++  + G +L+I++   +DQG Y C   N  GE
Sbjct: 264 CRAEGNPKPEIIWLRNNNELSMKTDSRLNLLDDG-TLMIQNTRETDQGIYQCMAKNVAGE 322

Query: 113 AKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            K+  + L      A P F ++P+       E+VT EC A+G P P+I W    +  S  
Sbjct: 323 VKTQEVTLRYFRSPARPAFVIQPQNTEVLVGESVTLECSATGHPPPQITWTRGDR--SPV 380

Query: 170 PPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
           P +PR  + P+  + I+N+ + D+G Y C A+N++  ++   ++ V A  P+ T  P+D 
Sbjct: 381 PTDPRVSITPSGGLYIQNVEQEDSGEYACFASNTVDSIHATAFIIVQA-LPQFTVTPQDR 439

Query: 229 YTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSGEYTC 287
             ++G+TV   C   G P+P + W     +L+   R+ +L +G L+I  VA  D G+Y C
Sbjct: 440 AVIEGQTVEFHCEAKGYPQPVIAWTKGGSQLSVDRRHLVLSSGTLRILAVALHDQGQYEC 499

Query: 288 FARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLR 345
            A N +G+ + +  LTV+       T  P D  VE G +    C    +P  + ++ W  
Sbjct: 500 QAVNIIGSQRVAAHLTVQPRVTPVFTSVPRDMTVEVGSNVQLPCRPQGEP--EPAVTW-- 555

Query: 346 GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV----- 400
             + +      +F  S +  LT+      D+G+Y C A+  +        L+V V     
Sbjct: 556 NKDGVQVTESGKFHISPEGFLTIRDVGTADAGRYECVARNTIGQASVSMVLSVNVPDVSR 615

Query: 401 ---PLEAPSNFTLIQVID-----AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSI 452
              P  A S    I  +D      +  +    P SP  L   FR  +     E+   G I
Sbjct: 616 NGDPFVATSIVEAIATVDRAINSTRTHLFDSRPRSPNDLLALFRYPRDPYTVEQARAGEI 675

Query: 453 RE 454
            E
Sbjct: 676 FE 677



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/262 (35%), Positives = 121/262 (46%), Gaps = 7/262 (2%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           L  + V L C   G P PQ  W++ D  P+    R+S    G  L I++VE  D G Y C
Sbjct: 351 LVGESVTLECSATGHPPPQITWTRGDRSPVPTDPRVSITPSG-GLYIQNVEQEDSGEYAC 409

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
             SN V    + +  + V A P FTV P+     E +TV F C+A G P+P I W   G 
Sbjct: 410 FASNTVDSIHATAF-IIVQALPQFTVTPQDRAVIEGQTVEFHCEAKGYPQPVIAWTKGGS 468

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA-PEITE 223
            +S    +     G  RI    L   D G Y C A N +G      ++ V     P  T 
Sbjct: 469 QLSVDRRHLVLSSGTLRILAVALH--DQGQYECQAVNIIGSQRVAAHLTVQPRVTPVFTS 526

Query: 224 APKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADS 282
            P+D     G  V L CR  G P+P V W  +  ++T  G++ I   G L I DV  AD+
Sbjct: 527 VPRDMTVEVGSNVQLPCRPQGEPEPAVTWNKDGVQVTESGKFHISPEGFLTIRDVGTADA 586

Query: 283 GEYTCFARNKLGTAQGSGSLTV 304
           G Y C ARN +G A  S  L+V
Sbjct: 587 GRYECVARNTIGQASVSMVLSV 608



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 134/308 (43%), Gaps = 11/308 (3%)

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAA--PYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           Q + TCE    +      +I    L    P  T EP+  +     TV F C+A G P+PE
Sbjct: 214 QAAATCEYPRRIQGRSVATITPEELDCERPRITSEPQDADVTLGNTVFFTCRAEGNPKPE 273

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV-YKDVYVNVL 215
           I W+ N   +S    +    +    + I+N R++D G Y C A N  G V  ++V +   
Sbjct: 274 IIWLRNNNELSMKTDSRLNLLDDGTLMIQNTRETDQGIYQCMAKNVAGEVKTQEVTLRYF 333

Query: 216 AH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGD 271
                P     P++   + G++V L C   G P P++ W    +    T  R +I  +G 
Sbjct: 334 RSPARPAFVIQPQNTEVLVGESVTLECSATGHPPPQITWTRGDRSPVPTDPRVSITPSGG 393

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
           L I +V   DSGEY CFA N + +   +  + V+     T  P+D  V  GQ+  F C A
Sbjct: 394 LYIQNVEQEDSGEYACFASNTVDSIHATAFIIVQALPQFTVTPQDRAVIEGQTVEFHCEA 453

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
              P  +  I W +G   +  +     + S   +L +   +  D GQY C+A   +    
Sbjct: 454 KGYP--QPVIAWTKGGSQLSVDRRHLVLSSG--TLRILAVALHDQGQYECQAVNIIGSQR 509

Query: 392 AQATLTVQ 399
             A LTVQ
Sbjct: 510 VAAHLTVQ 517


>gi|397471777|ref|XP_003807454.1| PREDICTED: peroxidasin homolog [Pan paniscus]
          Length = 1479

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 195/426 (45%), Gaps = 30/426 (7%)

Query: 51  VELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           V   C   G P P+ IW ++   + +    R++  + G +L+I++ + +DQG Y C   N
Sbjct: 263 VYFTCRAEGNPKPEIIWLRNNNELSMKTDSRLNLLDDG-TLMIQNTQETDQGIYQCMAKN 321

Query: 109 GVGEAKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             GE K+  + L      A P F ++P+       E+VT EC A+G P P+I W    + 
Sbjct: 322 VAGEVKTQEVTLRYFGSPARPTFVIQPQNTEVLVGESVTLECSATGHPPPQISWARGDR- 380

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            +  P +PR  + P+  + I+N+ + D+G Y C+ATN++  V+   ++ V A  P+ T  
Sbjct: 381 -TPLPVDPRVNITPSGGLYIQNVVQEDSGEYACSATNNIDSVHATAFIIVQA-LPQFTVT 438

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSG 283
           P+D   ++G+TV   C   G P P + W     +L+   R+ +L +G L+I+ VA  D G
Sbjct: 439 PQDRVVIEGQTVDFQCEAKGNPPPVIAWTKGGSQLSVDRRHLVLSSGTLRISGVALHDQG 498

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +Y C A N +G+ +    LTV+          P D  VE G +    C++  +P  + +I
Sbjct: 499 QYECQAVNIIGSQKVVAHLTVQPRVTPVFASIPSDTTVEVGANVQLPCSSQGEP--EPAI 556

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV- 400
            W    + +      +F  S +  LT+      D+G+Y C A+  +        L+V V 
Sbjct: 557 TW--NKDGVQVTESGKFHISPEGFLTINDVGPADAGRYECVARNTIGSASVSMVLSVNVP 614

Query: 401 -------PLEAPSNFTLIQVID-----AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
                  P  A S    I  +D      +  +    P SP  L   FR  +     E+  
Sbjct: 615 DVSRNGDPFVATSIVEAIATVDRAINSTRTHLFDSRPRSPNDLLALFRYPRDPYTVEQAR 674

Query: 449 EGSIRE 454
            G I E
Sbjct: 675 AGEIFE 680



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 135/308 (43%), Gaps = 11/308 (3%)

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAA--PYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           Q + TCE    +      +I    L    P  T EP+  +     TV F C+A G P+PE
Sbjct: 217 QAAATCEYPRRIQGRSVATITPEELNCERPRITSEPQDADVTSGNTVYFTCRAEGNPKPE 276

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV-YKDVYVNVL 215
           I W+ N   +S    +    +    + I+N +++D G Y C A N  G V  ++V +   
Sbjct: 277 IIWLRNNNELSMKTDSRLNLLDDGTLMIQNTQETDQGIYQCMAKNVAGEVKTQEVTLRYF 336

Query: 216 AH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGD 271
                P     P++   + G++V L C   G P P+++W    +       R  I  +G 
Sbjct: 337 GSPARPTFVIQPQNTEVLVGESVTLECSATGHPPPQISWARGDRTPLPVDPRVNITPSGG 396

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
           L I +V   DSGEY C A N + +   +  + V+     T  P+D  V  GQ+  F+C A
Sbjct: 397 LYIQNVVQEDSGEYACSATNNIDSVHATAFIIVQALPQFTVTPQDRVVIEGQTVDFQCEA 456

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
             +P     I W +G   +  +     + S   +L ++  +  D GQY C+A   +   +
Sbjct: 457 KGNP--PPVIAWTKGGSQLSVDRRHLVLSSG--TLRISGVALHDQGQYECQAVNIIGSQK 512

Query: 392 AQATLTVQ 399
             A LTVQ
Sbjct: 513 VVAHLTVQ 520


>gi|168272854|dbj|BAG10266.1| contactin-2 precursor [synthetic construct]
          Length = 1040

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 163/629 (25%), Positives = 266/629 (42%), Gaps = 57/629 (9%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWTTAE----PTLQIPSVSFEDEGTYEC 306

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEE------ETVTFECKASGLPEPEIH 158
           E  N  G         +V        +PE++    +        + + C A+G P P + 
Sbjct: 307 EAENSKGRD-------TVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVR 359

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+ ++      R +V    +    L   D+G Y C A N  G +Y    + V A A
Sbjct: 360 WLRNGELLAS---QNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALA 416

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKIT 275
           P+    P         G  +++ C+   APK  V W    + L    R T+   G L I 
Sbjct: 417 PDFRLNPVRRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIR 476

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           +++ +D G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP
Sbjct: 477 NISRSDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTLQCHASHDP 536

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDY-----SLTVTKSSELDSGQYTCRAQTELDFI 390
           ++ L+  W     PIDF+      +  +       LT+  +     G+YTC AQT +D  
Sbjct: 537 TMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSA 596

Query: 391 EAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDG 448
             +AT+ V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G
Sbjct: 597 SKEATVLVRGPPGPPGGVVVRDIGDTTIQ-LSWS----RGFDNHSPIAKYTLQARTPPAG 651

Query: 449 E-GSIRELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEG 502
           +   +R    N +G + T +V    P      RV+A N    G  +GP S+I    T E 
Sbjct: 652 KWKQVRTNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKI---RTREA 708

Query: 503 VPGTVQSLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
            P    S  +   G+     + W  +  E  NG   GY + ++    T       R+P  
Sbjct: 709 APSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQ--TARVPG- 765

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGST 614
           +D          + P T + + +  Y + GDG ES   L Y     P   P  V  +G +
Sbjct: 766 ADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVS 825

Query: 615 PNNLVISWTAMPEIEHNAPHFKYRI-FWR 642
            + + ++W  + + + N     Y I +W+
Sbjct: 826 SSEMNVTWEPVQQ-DMNGILLGYEIRYWK 853



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 149/375 (39%), Gaps = 38/375 (10%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           ++V L C    +P     W  +G  + + P  R  Q   G  +I+   +  D G Y C  
Sbjct: 55  EQVLLACRARASPPATYRWKMNGTEMKLEPGSR-HQLVGGNLVIMNPTKAQDAGVYQCLA 113

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIH------- 158
           SN VG   S    L       F    EF     +   T E     LP  P  H       
Sbjct: 114 SNPVGTVVSREAILR------FGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYR 167

Query: 159 WVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY----- 211
           W+ N  P +  P + R  V      + I     SD GNY C AT+ + +  K V+     
Sbjct: 168 WLLNEFP-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQ 226

Query: 212 VNVLAH-----APEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
           +N+ A      AP I    P + Y + G+ V L C  FG P P + W      L+  ++T
Sbjct: 227 LNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-PQWT 285

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
             E   L+I  V+F D G Y C A N  G     G + V+          D E + G + 
Sbjct: 286 TAEP-TLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNL 344

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            + C A   P  + ++ WLR  E +  ++    +  +   L  +K S  DSG Y C A+ 
Sbjct: 345 RWGCAAAGKP--RPTVRWLRNGELLASQNRVEVLAGD---LRFSKLSLEDSGMYQCVAEN 399

Query: 386 ELDFIEAQATLTVQV 400
           +   I A A L VQ 
Sbjct: 400 KHGTIYASAELAVQA 414



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 147/652 (22%), Positives = 235/652 (36%), Gaps = 71/652 (10%)

Query: 88  SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
           +L I     SD G+Y+C      + S     +K   ++L+     L AP      P    
Sbjct: 191 NLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDTRLFAPSIKARFPAETY 250

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + VT EC A G P P I W      +S     P+       + I ++   D G Y 
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-----PQWTTAEPTLQIPSVSFEDEGTYE 305

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V A  PE  +   D     G  +   C   G P+P V W+ N 
Sbjct: 306 CEAENSKGRDTVQGRIIVQAQ-PEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNG 364

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
           + L       +  GDL+ + ++  DSG Y C A NK GT   S  L V+         P 
Sbjct: 365 ELLASQNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPV 424

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
              + A +            + K  ++W +G+E +   S  R   + D +L +   S  D
Sbjct: 425 RRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSS--RVTVTPDGTLIIRNISRSD 482

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLE---APS--------NFTLIQVIDAKKAVV--- 421
            G+YTC A+  +    +   L+V+   +   APS        N TL Q   +    +   
Sbjct: 483 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTL-QCHASHDPTMDLT 541

Query: 422 -SWN----PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
            +W     P+      GH+R   V+   E  G+ +I    +  G   T      V ++  
Sbjct: 542 FTWTLDDFPIDFDKPGGHYRRTNVK---ETIGDLTILNAQLRHGGKYTCMAQTVVDSASK 598

Query: 477 FARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMG 536
            A VL                            +    +G +   L W +    +  +  
Sbjct: 599 EATVLVRGPPG------------------PPGGVVVRDIGDTTIQLSWSRGFDNHSPIAK 640

Query: 537 YKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-- 594
           Y ++ ++    K   +    P   +    +A++ GL P   Y   +      G G  S  
Sbjct: 641 YTLQARTPPAGKWKQVRTN-PANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGP 699

Query: 595 ----KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
               +     P   P  + G G  P  L+++WT M     N   F Y + +RR  +   W
Sbjct: 700 SSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTH-W 758

Query: 651 NQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
               V        V +N+    + P+E+K+       DG  S+  L+ +  E
Sbjct: 759 QTARVPGADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTALVYSAEE 810



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 141/614 (22%), Positives = 226/614 (36%), Gaps = 84/614 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G  +   +R+        L    +   D G Y C   N  G   
Sbjct: 348 CAAAGKPRPTVRWLRNGELLASQNRVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTIY 405

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F + P    I AA    +   C+    P+  + W    + +  +  
Sbjct: 406 A-SAELAVQALAPDFRLNPVRRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSS- 463

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V P+  + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 464 --RVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 520

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G  + L C     P  ++ +     +        GG Y    + ET GDL I +    
Sbjct: 521 NLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLR 580

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS---------------- 324
             G+YTC A+  + +A  S   TV               + G +                
Sbjct: 581 HGGKYTCMAQTVVDSA--SKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPI 638

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQ 378
           A +   A + P+ K   V    + P + E      Q        DY   V  S+ L +G+
Sbjct: 639 AKYTLQARTPPAGKWKQV---RTNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGE 695

Query: 379 YTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGY 438
            +    +++   EA  ++                     + +V+W P+S +   G   GY
Sbjct: 696 PSG-PSSKIRTREAAPSVAPSG--------LSGGGGAPGELIVNWTPMSREYQNGDGFGY 746

Query: 439 KVQ-------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            +         W      G+  +  V   ES    V  + P      ++ ++N   +GP 
Sbjct: 747 LLSFRRQGSTHWQTARVPGADAQYFVYSNES----VRPYTPFE---VKIRSYNRRGDGPE 799

Query: 492 SEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKGTKV 549
           S      + E  P    + + A  + SS   + W   +Q  NG+L+GY+I+Y      + 
Sbjct: 800 SLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGILLGYEIRYWKAGDKEA 859

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVE 609
                R   +     TSA+++GL P+TKY + +  Y +AG G  S        K P    
Sbjct: 860 AADRVRTAGLD----TSARVSGLHPNTKYHVTVRAYNRAGTGPASPSANATTMKPPPR-- 913

Query: 610 GRGSTPNNLVISWT 623
                P N  ISWT
Sbjct: 914 ---RPPGN--ISWT 922



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 114/300 (38%), Gaps = 34/300 (11%)

Query: 125 APYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P F  +P    F   + EE V   C+A   P     W  NG  +   P +  + VG N 
Sbjct: 36  GPVFEDQPLSVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNL 95

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTC 240
           + +   +  D G Y C A+N +G V     +       E ++  +D   T +G  V+L C
Sbjct: 96  VIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKTHEGWGVMLPC 155

Query: 241 RVFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGT 295
                 P     W+ N+      T GR+ + + TG+L I     +D G Y+C A + +  
Sbjct: 156 NPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDF 215

Query: 296 AQGSGSLTVKEHTHITDQPEDYEVEA---------------GQSATFRCNAVSDPSLKLS 340
           +  S      +   +    ED  + A               GQ  T  C A  +P  +  
Sbjct: 216 STKS---VFSKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPR-- 270

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +    +D    P++  + + +L +   S  D G Y C A+        Q  + VQ 
Sbjct: 271 IKWRK----VDGSLSPQWTTA-EPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQA 325


>gi|344236691|gb|EGV92794.1| Contactin-2 [Cricetulus griseus]
          Length = 1008

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 167/620 (26%), Positives = 267/620 (43%), Gaps = 43/620 (6%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G    +  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 225 ALVGQQVTLECFAFG----KIKWRKVDGSLSPQWATAE----PTLQIPSVSFEDEGTYEC 276

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           E  N  G   +    + V A P +        A     + + C A+G P P + W+ NG+
Sbjct: 277 EAENSKGR-DTVQGRIVVQAQPEWLKVISDTEADIGSNLRWACAAAGKPRPMVRWLRNGE 335

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           P++      R +V    +    L   D+G Y C A N  G +Y    + V A AP+  + 
Sbjct: 336 PLAS---QNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRQN 392

Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P         G  + + C+   APK  + W    + L    R T+   G L I +++ +D
Sbjct: 393 PVRRLIPAARGGEISIPCQPRAAPKATILWSKGTEILGNSTRVTVTSDGTLIIRNISRSD 452

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP++ L+ 
Sbjct: 453 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGDNLTLQCHASHDPTMDLTF 512

Query: 342 VWLRGSEPIDFES-----EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W     PI+F+          V+     LT+  +     G+Y C AQT +D    +AT+
Sbjct: 513 TWTLDDFPINFDKPGGHYRRASVKETIGDLTILNAQLRHGGKYMCMAQTVVDGASKEATV 572

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GSIR 453
            V+ P   P    +  + D     VSW+    +    H     Y +Q  T   G+   +R
Sbjct: 573 LVRGPPGPPGGVVVRDIGDT-TVQVSWS----RGFDNHSPIAKYTLQARTPPSGKWKQVR 627

Query: 454 ELIVN-KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLE 511
              VN +G + T +V   +P      RV A N    G PS   S + T E VP    S  
Sbjct: 628 TNPVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSRIRTKEAVPSVAPSGL 687

Query: 512 AIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
           +   G+     + W  +  E  NG   GY + ++  +G+ V     R+P  +D       
Sbjct: 688 SGGGGAPGELIINWTPMSREYQNGDGFGYLLSFRR-QGSSVW-QTARVPG-ADAQYFVYS 744

Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGSTPNNLVISWT 623
              + P T + + +  Y + GDG ES   L Y     P   P  V  +GS+ + L +SW 
Sbjct: 745 NDSIHPYTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGSSSSELNVSWE 804

Query: 624 AMPEIEHNAPHFKYRI-FWR 642
           ++ + + N     Y I +W+
Sbjct: 805 SVQQ-DTNGILLGYEIRYWK 823



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 144/374 (38%), Gaps = 42/374 (11%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPIN--PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           +V L C    +P     W  +G  +N  P  R  Q   G  +I+   +  D G Y C  S
Sbjct: 30  QVTLACRARASPPATYRWKMNGTDMNLEPGSR-HQLMGGNLVIMSPTKAQDAGVYQCLAS 88

Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIH-------W 159
           N VG   S    L       F    EF     +   T E     LP  P  H       W
Sbjct: 89  NPVGTVVSKEAVLR------FGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYRW 142

Query: 160 VHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY-----V 212
           + N  P +  P + R  V      + I     SD GNY C AT+ + +  K V+     +
Sbjct: 143 LLNEFP-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQL 201

Query: 213 NVLAHAPEI------TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
           N+ A  P +         P + Y + G+ V L C  FG    ++ W      L+    T 
Sbjct: 202 NLAAEDPRLFAPSIKARFPPETYALVGQQVTLECFAFG----KIKWRKVDGSLSPQWATA 257

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
             T  L+I  V+F D G Y C A N  G     G + V+          D E + G +  
Sbjct: 258 EPT--LQIPSVSFEDEGTYECEAENSKGRDTVQGRIVVQAQPEWLKVISDTEADIGSNLR 315

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + C A   P  +  + WLR  EP+  ++    +  +   L  +K S  DSG Y C A+ +
Sbjct: 316 WACAAAGKP--RPMVRWLRNGEPLASQNRVEVLAGD---LRFSKLSLEDSGMYQCVAENK 370

Query: 387 LDFIEAQATLTVQV 400
              I A A L VQ 
Sbjct: 371 HGTIYASAELAVQA 384



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 141/639 (22%), Positives = 247/639 (38%), Gaps = 85/639 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G P+   +R+        L    +   D G Y C   N  G   
Sbjct: 318 CAAAGKPRPMVRWLRNGEPLASQNRVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTIY 375

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F   P    I AA    ++  C+    P+  I W    + +  +  
Sbjct: 376 A-SAELAVQALAPDFRQNPVRRLIPAARGGEISIPCQPRAAPKATILWSKGTEILGNST- 433

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V  +  + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 434 --RVTVTSDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 490

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G  + L C     P  ++ +     +        GG Y   ++ ET GDL I +    
Sbjct: 491 NVGDNLTLQCHASHDPTMDLTFTWTLDDFPINFDKPGGHYRRASVKETIGDLTILNAQLR 550

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE-----DYEVEAGQS---------AT 326
             G+Y C A+  +  A    ++ V+               D  V+   S         A 
Sbjct: 551 HGGKYMCMAQTVVDGASKEATVLVRGPPGPPGGVVVRDIGDTTVQVSWSRGFDNHSPIAK 610

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQYT 380
           +   A + PS K   V    + P++ E      Q        DY   V+ S+ L +G+ +
Sbjct: 611 YTLQARTPPSGKWKQV---RTNPVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPS 667

Query: 381 ---CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRG 437
               R +T+      +A  +V     +       ++I      ++W P+S +   G   G
Sbjct: 668 GPSSRIRTK------EAVPSVAPSGLSGGGGAPGELI------INWTPMSREYQNGDGFG 715

Query: 438 YKVQ-------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGP 490
           Y +         W      G+  +  V   +S    +  + P      ++ ++N   +GP
Sbjct: 716 YLLSFRRQGSSVWQTARVPGADAQYFVYSNDS----IHPYTPFE---VKIRSYNRRGDGP 768

Query: 491 PSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQ-PNGVLMGYKIKYQSVKGTK 548
            S      + E  P    + + A    SS   + W   +Q  NG+L+GY+I+Y      +
Sbjct: 769 ESLTALVYSAEEEPRVAPTKVWAKGSSSSELNVSWESVQQDTNGILLGYEIRYWKAGDNE 828

Query: 549 VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-----AESKYLFYVPFK 603
                 R   +     TSA++ GL P+TKY + +  Y +AG G     A++  +   P +
Sbjct: 829 AAADRVRTAGLD----TSARVTGLYPNTKYHVTVRAYNRAGTGPASPSADAMTMKPPPRR 884

Query: 604 NPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
            P N+    S+ ++L + W  +  +++ +    Y++ ++
Sbjct: 885 PPGNISWTFSS-SSLNLKWDPVVPLQNESTVTGYKMLYQ 922



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 141/656 (21%), Positives = 232/656 (35%), Gaps = 83/656 (12%)

Query: 88  SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
           +L I     SD G+Y+C      + S     +K   ++L+     L AP      P    
Sbjct: 165 NLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPPETY 224

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + VT EC A G    +I W      +S     P+       + I ++   D G Y 
Sbjct: 225 ALVGQQVTLECFAFG----KIKWRKVDGSLS-----PQWATAEPTLQIPSVSFEDEGTYE 275

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V A  PE  +   D     G  +   C   G P+P V W+ N 
Sbjct: 276 CEAENSKGRDTVQGRIVVQAQ-PEWLKVISDTEADIGSNLRWACAAAGKPRPMVRWLRNG 334

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
           + L       +  GDL+ + ++  DSG Y C A NK GT   S  L V+         P 
Sbjct: 335 EPLASQNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRQNPV 394

Query: 316 DYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
              + A  G   +  C   + P  K +I+W +G+E +   +  R   ++D +L +   S 
Sbjct: 395 RRLIPAARGGEISIPCQPRAAP--KATILWSKGTEILG--NSTRVTVTSDGTLIIRNISR 450

Query: 374 LD-----------------SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDA 416
            D                 +G  + R  T++    + A + V   L    + +    +D 
Sbjct: 451 SDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGDNLTLQCHASHDPTMDL 510

Query: 417 KKAVVSWN----PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
                +W     P++     GH+R   V+   E  G+ +I    +  G          V 
Sbjct: 511 ---TFTWTLDDFPINFDKPGGHYRRASVK---ETIGDLTILNAQLRHGGKYMCMAQTVVD 564

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
            +   A VL                            +    +G +   + W +    + 
Sbjct: 565 GASKEATVLVRGPPG------------------PPGGVVVRDIGDTTVQVSWSRGFDNHS 606

Query: 533 VLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 592
            +  Y ++ ++    K   +    P   +    +A++ GL P   Y   ++     G G 
Sbjct: 607 PIAKYTLQARTPPSGKWKQVRTN-PVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGE 665

Query: 593 ES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
            S      +    VP   P  + G G  P  L+I+WT M     N   F Y + +RR  +
Sbjct: 666 PSGPSSRIRTKEAVPSVAPSGLSGGGGAPGELIINWTPMSREYQNGDGFGYLLSFRRQGS 725

Query: 647 GEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
              W    V        V +N     + P+E+K+       DG  S+  L+ +  E
Sbjct: 726 -SVWQTARVPGADAQYFVYSNDSIHPYTPFEVKIRSYNRRGDGPESLTALVYSAEE 780



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 113/298 (37%), Gaps = 34/298 (11%)

Query: 125 APYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P F  +P    F   + E+ VT  C+A   P     W  NG  ++  P +  + +G N 
Sbjct: 10  GPVFEDQPVGLLFPEESTEDQVTLACRARASPPATYRWKMNGTDMNLEPGSRHQLMGGNL 69

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTC 240
           + +   +  D G Y C A+N +G V     V       E ++  +D   T +G  V+L C
Sbjct: 70  VIMSPTKAQDAGVYQCLASNPVGTVVSKEAVLRFGFLQEFSKEERDPVKTHEGWGVMLPC 129

Query: 241 RVFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGT 295
                 P     W+ N+      T GR+ + + TG+L I     +D G Y+C A + +  
Sbjct: 130 NPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDF 189

Query: 296 AQGSGSLTVKEHTHITDQ-------------PEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
           +  S      +     +              PE Y +  GQ  T  C A         I 
Sbjct: 190 STKSVFSKFAQLNLAAEDPRLFAPSIKARFPPETYAL-VGQQVTLECFAFG------KIK 242

Query: 343 WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           W +    +D    P++  + + +L +   S  D G Y C A+        Q  + VQ 
Sbjct: 243 WRK----VDGSLSPQWATA-EPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIVVQA 295


>gi|306921221|dbj|BAJ17690.1| contactin 2 [synthetic construct]
          Length = 1040

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 163/629 (25%), Positives = 266/629 (42%), Gaps = 57/629 (9%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWTTAE----PTLQIPSVSFEDEGTYEC 306

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEE------ETVTFECKASGLPEPEIH 158
           E  N  G         +V        +PE++    +        + + C A+G P P + 
Sbjct: 307 EAENSKGRD-------TVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVR 359

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+ ++      R +V    +    L   D+G Y C A N  G +Y    + V A A
Sbjct: 360 WLRNGELLAS---QNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALA 416

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKIT 275
           P+    P         G  +++ C+   APK  V W    + L    R T+   G L I 
Sbjct: 417 PDFRLNPVRRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIR 476

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           +++ +D G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C+A  DP
Sbjct: 477 NISRSDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTLQCHASHDP 536

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDY-----SLTVTKSSELDSGQYTCRAQTELDFI 390
           ++ L+  W     PIDF+      +  +       LT+  +     G+YTC AQT +D  
Sbjct: 537 TMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSA 596

Query: 391 EAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDG 448
             +AT+ V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G
Sbjct: 597 SKEATVLVRGPPGPPGGVVVRDIGDTTIQ-LSWS----RGFDNHSPIAKYTLQARTPPAG 651

Query: 449 E-GSIRELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEG 502
           +   +R    N +G + T +V    P      RV+A N    G  +GP S+I    T E 
Sbjct: 652 KWKQVRTNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKI---RTREA 708

Query: 503 VPGTVQSLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
            P    S  +   G+     + W  +  E  NG   GY + ++    T       R+P  
Sbjct: 709 APSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQ--TARVPG- 765

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGST 614
           +D          + P T + + +  Y + GDG ES   L Y     P   P  V  +G +
Sbjct: 766 ADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVS 825

Query: 615 PNNLVISWTAMPEIEHNAPHFKYRI-FWR 642
            + + ++W  + + + N     Y I +W+
Sbjct: 826 SSEMNVTWEPVQQ-DMNGILLGYEIRYWK 853



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 150/369 (40%), Gaps = 26/369 (7%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           ++V L C    +P     W  +G  + + P  R  Q   G  +I+   +  D G Y C  
Sbjct: 55  EQVLLACRARASPPATYRWKMNGTEMKLEPGSR-HQLVGGNLVIMNPTKAQDAGVYQCLA 113

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVHNGK 164
           SN VG   S    L       F+ E  + + A E   V   C   +  P     W+ N  
Sbjct: 114 SNPVGTVVSREAILRFGFLQEFSKEERDPVKAHEGWGVMLPCNPPAHYPGLSYRWLLNEF 173

Query: 165 PISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY-----VNVLAH 217
           P +  P + R  V      + I     SD GNY C AT+ + +  K V+     +N+ A 
Sbjct: 174 P-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAE 232

Query: 218 -----APEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD 271
                AP I    P + Y + G+ V L C  FG P P + W      L+  ++T  E   
Sbjct: 233 DTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-PQWTTAEP-T 290

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
           L+I  V+F D G Y C A N  G     G + V+          D E + G +  + C A
Sbjct: 291 LQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAA 350

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
              P  + ++ WLR  E +  ++    +  +   L  +K S  DSG Y C A+ +   I 
Sbjct: 351 AGKP--RPTVRWLRNGELLASQNRVEVLAGD---LRFSKLSLEDSGMYQCVAENKHGTIY 405

Query: 392 AQATLTVQV 400
           A A L VQ 
Sbjct: 406 ASAELAVQA 414



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 147/652 (22%), Positives = 235/652 (36%), Gaps = 71/652 (10%)

Query: 88  SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
           +L I     SD G+Y+C      + S     +K   ++L+     L AP      P    
Sbjct: 191 NLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDTRLFAPSIKARFPAETY 250

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + VT EC A G P P I W      +S     P+       + I ++   D G Y 
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-----PQWTTAEPTLQIPSVSFEDEGTYE 305

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A NS G       + V A  PE  +   D     G  +   C   G P+P V W+ N 
Sbjct: 306 CEAENSKGRDTVQGRIIVQAQ-PEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNG 364

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
           + L       +  GDL+ + ++  DSG Y C A NK GT   S  L V+         P 
Sbjct: 365 ELLASQNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPV 424

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
              + A +            + K  ++W +G+E +   S  R   + D +L +   S  D
Sbjct: 425 RRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSS--RVTVTPDGTLIIRNISRSD 482

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLE---APS--------NFTLIQVIDAKKAVV--- 421
            G+YTC A+  +    +   L+V+   +   APS        N TL Q   +    +   
Sbjct: 483 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTL-QCHASHDPTMDLT 541

Query: 422 -SWN----PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
            +W     P+      GH+R   V+   E  G+ +I    +  G   T      V ++  
Sbjct: 542 FTWTLDDFPIDFDKPGGHYRRTNVK---ETIGDLTILNAQLRHGGKYTCMAQTVVDSASK 598

Query: 477 FARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMG 536
            A VL                            +    +G +   L W +    +  +  
Sbjct: 599 EATVLVRGPPG------------------PPGGVVVRDIGDTTIQLSWSRGFDNHSPIAK 640

Query: 537 YKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-- 594
           Y ++ ++    K   +    P   +    +A++ GL P   Y   +      G G  S  
Sbjct: 641 YTLQARTPPAGKWKQVRTN-PANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGP 699

Query: 595 ----KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
               +     P   P  + G G  P  L+++WT M     N   F Y + +RR  +   W
Sbjct: 700 SSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTH-W 758

Query: 651 NQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
               V        V +N+    + P+E+K+       DG  S+  L+ +  E
Sbjct: 759 QTARVPGADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTALVYSAEE 810



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 141/614 (22%), Positives = 226/614 (36%), Gaps = 84/614 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G  +   +R+        L    +   D G Y C   N  G   
Sbjct: 348 CAAAGKPRPTVRWLRNGELLASQNRVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTIY 405

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F + P    I AA    +   C+    P+  + W    + +  +  
Sbjct: 406 A-SAELAVQALAPDFRLNPVRRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSS- 463

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V P+  + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 464 --RVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 520

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G  + L C     P  ++ +     +        GG Y    + ET GDL I +    
Sbjct: 521 NLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLR 580

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS---------------- 324
             G+YTC A+  + +A  S   TV               + G +                
Sbjct: 581 HGGKYTCMAQTVVDSA--SKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPI 638

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQ 378
           A +   A + P+ K   V    + P + E      Q        DY   V  S+ L +G+
Sbjct: 639 AKYTLQARTPPAGKWKQV---RTNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGE 695

Query: 379 YTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGY 438
            +    +++   EA  ++                     + +V+W P+S +   G   GY
Sbjct: 696 PSG-PSSKIRTREAAPSVAPSG--------LSGGGGAPGELIVNWTPMSREYQNGDGFGY 746

Query: 439 KVQ-------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            +         W      G+  +  V   ES    V  + P      ++ ++N   +GP 
Sbjct: 747 LLSFRRQGSTHWQTARVPGADAQYFVYSNES----VRPYTPFE---VKIRSYNRRGDGPE 799

Query: 492 SEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKGTKV 549
           S      + E  P    + + A  + SS   + W   +Q  NG+L+GY+I+Y      + 
Sbjct: 800 SLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGILLGYEIRYWKAGDKEA 859

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVE 609
                R   +     TSA+++GL P+TKY + +  Y +AG G  S        K P    
Sbjct: 860 AADRVRTAGLD----TSARVSGLHPNTKYHVTVRAYNRAGTGPASPSANATTMKPPPR-- 913

Query: 610 GRGSTPNNLVISWT 623
                P N  ISWT
Sbjct: 914 ---RPPGN--ISWT 922



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 113/300 (37%), Gaps = 34/300 (11%)

Query: 125 APYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P F  +P    F   + EE V   C+A   P     W  NG  +   P +  + VG N 
Sbjct: 36  GPVFEDQPLSVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNL 95

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTC 240
           + +   +  D G Y C A+N +G V     +       E ++  +D     +G  V+L C
Sbjct: 96  VIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKAHEGWGVMLPC 155

Query: 241 RVFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGT 295
                 P     W+ N+      T GR+ + + TG+L I     +D G Y+C A + +  
Sbjct: 156 NPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDF 215

Query: 296 AQGSGSLTVKEHTHITDQPEDYEVEA---------------GQSATFRCNAVSDPSLKLS 340
           +  S      +   +    ED  + A               GQ  T  C A  +P  +  
Sbjct: 216 STKS---VFSKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPR-- 270

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
           I W +    +D    P++  + + +L +   S  D G Y C A+        Q  + VQ 
Sbjct: 271 IKWRK----VDGSLSPQWTTA-EPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQA 325


>gi|339247401|ref|XP_003375334.1| putative fibronectin type III domain protein [Trichinella spiralis]
 gi|316971331|gb|EFV55124.1| putative fibronectin type III domain protein [Trichinella spiralis]
          Length = 1151

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/350 (34%), Positives = 170/350 (48%), Gaps = 40/350 (11%)

Query: 67  WSKDGVPINPSDRISQG-NYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
           W K    I+P  R++ G ++ KSL+I+ V+F D+G Y C   +      S  + ++V AA
Sbjct: 223 WRKVNGVIDPR-RVNWGTDFKKSLLIQDVDFHDEGDYECFFPSM--PELSRRLKVNVHAA 279

Query: 126 PYFTVE--PEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
           PY+ VE  P   N++E E+V F C A G P P I +  NG  I    P+ R  +    +T
Sbjct: 280 PYW-VEGPPPSQNSSEGESVEFRCNARGKPTPNITFYKNGHKIV---PDDRYSIDGEVLT 335

Query: 184 IENLRKS-----DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVL 238
           I+NLRK+     D   Y C A N+ GYV+ + Y+N+L+    I E P +   V G+  V 
Sbjct: 336 IQNLRKAPDGAGDNAVYQCKAENAYGYVWANFYLNILSFPAVILEGPGNREAVVGQRSVH 395

Query: 239 TCRVFGAPKPEVNWIHNQKELTGG--RYTILET---GDLKITDVAFADSGEYTCFARNKL 293
            CRVFG+PKP++ W      LTG   RYT L      +L + +V       + C A NK 
Sbjct: 396 KCRVFGSPKPKIEW--RSPVLTGALYRYTPLNAEGISELVLYEVDKKHEASFECHASNKY 453

Query: 294 GTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFE 353
           G A   GSL V+                G S    C A  D  LK+   WL    P+   
Sbjct: 454 GEASEIGSLVVR----------------GNSIQLPCKAYHDNLLKVKYTWLIDGIPLG-N 496

Query: 354 SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-VPL 402
            +P      +Y+L +      DS  YTC A+T+LD  E  AT+ V+ VPL
Sbjct: 497 LQPHIKVDENYTLIIENPKASDSADYTCVAETKLDKAERVATILVKDVPL 546



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 102/199 (51%), Gaps = 6/199 (3%)

Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW--TEKDGEGSIRELIVN 458
           P EAP NF L+ V+    A  +W+PV P SL G+F+GYK+  W  T K  +   +E + +
Sbjct: 753 PDEAPKNFRLVNVVAPTVATFAWDPVDPASLHGNFKGYKIVHWHDTGKRSDPVKKESLFD 812

Query: 459 KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSS 518
              S  T  D   P   N+A V A N AY+ PPS+ I F  PEGVP  VQSL A PL   
Sbjct: 813 SSASQGTVYD-LKPFRVNYAEVYAANDAYDSPPSQRIRFDMPEGVPSQVQSLSAFPLSHR 871

Query: 519 AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLER---LPYISDPTTTSAKLAGLEPS 575
              + W  P + NG L+GY + Y  +  +K G        +  + D      ++ GL+  
Sbjct: 872 EIGVIWKPPREYNGHLIGYNLSYCLLSESKSGASFADGSCMYRMYDVDVNHERIHGLKAE 931

Query: 576 TKYRIHLAGYTKAGDGAES 594
           ++YR+ + G T AG G  S
Sbjct: 932 SEYRVEMRGVTNAGLGDPS 950



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 52/80 (65%), Gaps = 1/80 (1%)

Query: 600 VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEA-WNQDDVLDW 658
           +P  NP NV  RG++P+NLV+SW  +  ++ N P F Y +  +R +  ++ W    V D 
Sbjct: 649 LPELNPANVVVRGTSPDNLVVSWDPVERVDWNGPDFHYVVEMKRADDDDSRWETAIVTDP 708

Query: 659 RQSELVLANQPTFQPYEIKV 678
            +S+LV+ +QPT++PY+++V
Sbjct: 709 NESQLVVPDQPTYEPYDVRV 728



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 135/610 (22%), Positives = 227/610 (37%), Gaps = 99/610 (16%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGS-----YT 103
           + VE  C   G P P   + K+G  I P DR S    G+ L I+++  +  G+     Y 
Sbjct: 296 ESVEFRCNARGKPTPNITFYKNGHKIVPDDRYSID--GEVLTIQNLRKAPDGAGDNAVYQ 353

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECKASGLPEPEIHW--- 159
           C+  N  G   + +  L++L+ P   +E P    A   +    +C+  G P+P+I W   
Sbjct: 354 CKAENAYGYVWA-NFYLNILSFPAVILEGPGNREAVVGQRSVHKCRVFGSPKPKIEWRSP 412

Query: 160 VHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
           V  G      P N     G + + +  + K    ++ C+A+N  G             A 
Sbjct: 413 VLTGALYRYTPLNAE---GISELVLYEVDKKHEASFECHASNKYG------------EAS 457

Query: 220 EITEAPKDEYTVDGKTVVLTCRVF--GAPKPEVNWIHNQKELTGGR--YTILETGDLKIT 275
           EI         V G ++ L C+ +     K +  W+ +   L   +    + E   L I 
Sbjct: 458 EIGSL-----VVRGNSIQLPCKAYHDNLLKVKYTWLIDGIPLGNLQPHIKVDENYTLIIE 512

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQ-SATFRCNAVSD 334
           +   +DS +YTC A  KL  A+   ++ VK+   +   P    V   + +A  R      
Sbjct: 513 NPKASDSADYTCVAETKLDKAERVATILVKD---VPLPPFFVGVTCSERNAAVRFQHRDR 569

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQ--SND--------YSLTVTKSSELD--------- 375
           P         R + P+    E  +VQ  SND        Y + VT  ++ D         
Sbjct: 570 P---------RTAAPV----ESFWVQYNSNDAEPDAWHIYPVPVTTRADKDWWTITVPLH 616

Query: 376 -SGQYTCRA-------QTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVS 427
             G ++ RA        +       Q T    +P   P+N  +++       VVSW+PV 
Sbjct: 617 PWGNFSFRAVARNEVGDSAPSLASTQCTTAAALPELNPAN-VVVRGTSPDNLVVSWDPVE 675

Query: 428 PQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF----ARVLAF 483
                G    Y V+     D +      IV    +   E    VP    +     RV + 
Sbjct: 676 RVDWNGPDFHYVVEMKRADDDDSRWETAIV----TDPNESQLVVPDQPTYEPYDVRVQSA 731

Query: 484 N--GAYNGPPSEIISFV---TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
           N  G     P+ +  +     P+  P   + +  +    + F    V P   +G   GYK
Sbjct: 732 NSLGKATVSPATVRGYSGEGYPDEAPKNFRLVNVVAPTVATFAWDPVDPASLHGNFKGYK 791

Query: 539 IKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF 598
           I +    G +  P+ +    + D + +   +  L+P   +R++ A    A D  +S    
Sbjct: 792 IVHWHDTGKRSDPVKKE--SLFDSSASQGTVYDLKP---FRVNYAEVYAANDAYDSPPSQ 846

Query: 599 YVPFKNPDNV 608
            + F  P+ V
Sbjct: 847 RIRFDMPEGV 856



 Score = 43.9 bits (102), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 4/92 (4%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN---PSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           K+    C   G P     W KDGVP+N    +DR +      + I+  +   D+G Y C 
Sbjct: 54  KERRFLCKASGYPSVSYRWLKDGVPLNFEELNDRATSVPGEGTFILSKLRLEDEGIYQCI 113

Query: 106 VSNGVGEAKSYSIDLSVLAAPYF-TVEPEFIN 136
             NG G A    I L      YF   EPE I+
Sbjct: 114 AENGNGSAYDREIVLRRTFMSYFPKSEPEIID 145



 Score = 39.7 bits (91), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 145 FECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT--IENLRKSDTGNYGCNATNS 202
           F CKASG P     W+ +G P++    N R    P   T  +  LR  D G Y C A N 
Sbjct: 58  FLCKASGYPSVSYRWLKDGVPLNFEELNDRATSVPGEGTFILSKLRLEDEGIYQCIAENG 117

Query: 203 LGYVY 207
            G  Y
Sbjct: 118 NGSAY 122


>gi|134085437|ref|NP_001076815.1| peroxidasin precursor [Xenopus (Silurana) tropicalis]
 gi|57230943|tpg|DAA05635.1| TPA_exp: peroxidasin [Xenopus tropicalis]
          Length = 1460

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 186/410 (45%), Gaps = 34/410 (8%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSD--RISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           V   C   G P P+ IW ++   ++  D  R++  N G +L+I++ + +DQG Y C   N
Sbjct: 256 VYFTCRAEGNPKPEIIWLRNNNELSMKDDSRLNLLNDG-TLMIQNTKETDQGIYQCMAKN 314

Query: 109 GVGEAKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             GE K++ + L      A P F ++P+       E+VT EC A+G P P + W    + 
Sbjct: 315 VAGEVKTHEVTLRYYGTPATPTFVIQPQNTEVLVGESVTLECSATGQPHPRVTWTRGDR- 373

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            +  P +PR  + P+  + I+N+ + D G Y C ATNS+  ++   Y+ V A  P+ T  
Sbjct: 374 -TPLPSDPRINITPSGGLYIQNVNQDDAGEYTCFATNSVETIHSTAYIIVQA-VPQFTVV 431

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSG 283
           P+D    +G TV   C   G PKP + W     +L+   R+ +L +G L+I  VA  D G
Sbjct: 432 PQDRNVFEGHTVDFHCEAQGNPKPVIAWTKGGNQLSVDRRHQVLSSGTLRILRVALHDQG 491

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTHIT----DQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           +Y C A N +G+   +  L V+  T +T      P D  VE G      C++  DP L +
Sbjct: 492 QYECQAVNIVGSKSTAAQLIVQ--TRVTPVFATVPNDMTVEVGTDVQIPCSSQGDP-LPI 548

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            I W    + I      +F  S    L +  +   D G+Y C A+  + +      L+V 
Sbjct: 549 -ITW--NKDGIQVTESGKFHISPHGYLAIRDAGLADQGRYECVARNPIGYSSVSMVLSVL 605

Query: 400 V--------PLEAPSNFTLIQVID-----AKKAVVSWNPVSPQSLRGHFR 436
           V        P  A S    I  +D      +  +    P SP  L   FR
Sbjct: 606 VPEVSRTGDPFVATSIIEAIATVDRAINSTRTHLFDSRPRSPGDLLALFR 655



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 136/309 (44%), Gaps = 13/309 (4%)

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAA--PYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           Q + TCE    +      +I  S L    P  T EP+ ++     TV F C+A G P+PE
Sbjct: 210 QAAATCEYPRRLQGRSVSTITPSELNCERPRITSEPQDVDVTFGNTVYFTCRAEGNPKPE 269

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           I W+ N   +S    +    +    + I+N +++D G Y C A N  G V K   V +  
Sbjct: 270 IIWLRNNNELSMKDDSRLNLLNDGTLMIQNTKETDQGIYQCMAKNVAGEV-KTHEVTLRY 328

Query: 217 HA----PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETG 270
           +     P     P++   + G++V L C   G P P V W    +    +  R  I  +G
Sbjct: 329 YGTPATPTFVIQPQNTEVLVGESVTLECSATGQPHPRVTWTRGDRTPLPSDPRINITPSG 388

Query: 271 DLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN 330
            L I +V   D+GEYTCFA N + T   +  + V+     T  P+D  V  G +  F C 
Sbjct: 389 GLYIQNVNQDDAGEYTCFATNSVETIHSTAYIIVQAVPQFTVVPQDRNVFEGHTVDFHCE 448

Query: 331 AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
           A  +P  K  I W +G   +  +   + + S   +L + + +  D GQY C+A   +   
Sbjct: 449 AQGNP--KPVIAWTKGGNQLSVDRRHQVLSSG--TLRILRVALHDQGQYECQAVNIVGSK 504

Query: 391 EAQATLTVQ 399
              A L VQ
Sbjct: 505 STAAQLIVQ 513



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 117/265 (44%), Gaps = 11/265 (4%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
            L  + V L C   G P P+  W++ D  P+    RI+    G  L I++V   D G YT
Sbjct: 346 VLVGESVTLECSATGQPHPRVTWTRGDRTPLPSDPRINITPSG-GLYIQNVNQDDAGEYT 404

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C  +N V    S +  + V A P FTV P+  N  E  TV F C+A G P+P I W   G
Sbjct: 405 CFATNSVETIHSTAY-IIVQAVPQFTVVPQDRNVFEGHTVDFHCEAQGNPKPVIAWTKGG 463

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKS--DTGNYGCNATNSLGYVYKDVYVNVLAHA-PE 220
             +S      RR    +  T+  LR +  D G Y C A N +G       + V     P 
Sbjct: 464 NQLSVD----RRHQVLSSGTLRILRVALHDQGQYECQAVNIVGSKSTAAQLIVQTRVTPV 519

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
               P D     G  V + C   G P P + W  +  ++T  G++ I   G L I D   
Sbjct: 520 FATVPNDMTVEVGTDVQIPCSSQGDPLPIITWNKDGIQVTESGKFHISPHGYLAIRDAGL 579

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTV 304
           AD G Y C ARN +G +  S  L+V
Sbjct: 580 ADQGRYECVARNPIGYSSVSMVLSV 604


>gi|147901606|ref|NP_001081987.1| protein tyrosine phosphatase, receptor type, F precursor [Xenopus
           laevis]
 gi|7248659|gb|AAF43606.1|AF197945_1 receptor protein tyrosine phosphatase LAR [Xenopus laevis]
          Length = 1788

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 180/717 (25%), Positives = 293/717 (40%), Gaps = 75/717 (10%)

Query: 24  ISASQNRHAPKQQYVTRK--KEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS 81
           I+ +Q  H P      RK   ++ +        C     P P+  W K G  ++ S R  
Sbjct: 21  ITLTQADHEP---VFVRKPDDQIGISGGVASFVCQATADPKPRITWMKKGKKVS-SQRFE 76

Query: 82  QGNY----GKSLIIKHVEF-SDQGSYTCEVSNGVGEAKSYSIDLSVL-------AAPYFT 129
              +    G  L I+ +    D+  Y C  +N VGE  S S  L+VL         P   
Sbjct: 77  VIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINS-SAKLTVLEEEQLPHGFPVID 135

Query: 130 VEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPR-RKVGPNRITIENLR 188
           + P+     +  T T  C ASG P+PEI W  +  P+  A  N R +++    + IEN  
Sbjct: 136 MGPQLKVVEKTRTATMLCAASGNPDPEITWFKDFLPVDTASSNGRIKQLRSGALQIENSE 195

Query: 189 KSDTGNYGCNATNSLGYVYK---DVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
           +SD G Y C ATNS G  Y    ++YV V   AP  +  P +   + G +V LTC   GA
Sbjct: 196 ESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSIPPSNHEVMPGGSVNLTCVAVGA 255

Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
           P P V W+   +ELT      +    L++T++   DS  YTC A + LG  +    +TVK
Sbjct: 256 PMPYVKWMAGLEELTKEDEMPVGRNGLELTNI--KDSANYTCVAISSLGMIEAVAQITVK 313

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS-EPIDF---ESEPRFVQS 361
               +   P D  V    + +            +++ W  G+ +P+ +   + +P+  +S
Sbjct: 314 A---LPKPPLDAMVTETTATS------------VTLTWDSGNPDPVSYYVIQYKPKASES 358

Query: 362 NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ--------ATLTVQVPLEAPSNFTL--- 410
           +   +    ++    G  +  ++ E   I             +  Q   +APS+  L   
Sbjct: 359 SFQEVDGVATTRYSIGGLSPFSEYEFRIIAVNNIGRGPPSEVIEAQTGEQAPSSPPLKVQ 418

Query: 411 IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKF 470
            +++ A   +V W+   P+   G  RG++V   T+     S+ +   N  ++  T +   
Sbjct: 419 ARMLSASTMLVQWD--LPEEPNGQIRGFRVYYTTDPHLPFSMWQKH-NVVDNHLTTIGSL 475

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
              +    RVLAF    +GPPSEII   T +GVP      +A     +   L W+ P  P
Sbjct: 476 TTGTTYSIRVLAFTSVGDGPPSEIIQVKTQQGVPAQPVDFQAEAETDTRILLTWLLP--P 533

Query: 531 NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGD 590
              +  Y++ Y        G   E+   +  P ++ A + GL+P T Y   LA ++  G 
Sbjct: 534 QERITKYELLYWE------GTNGEQHKLLFHPASSYA-VEGLKPDTLYHFRLAAWSDTGV 586

Query: 591 GA-----ESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
           G      ++     +P   P  VE       ++ ++W +    + N     Y++ + R  
Sbjct: 587 GVYTPAIQATTAQSMPSAPPRKVEVDSVNSTSVRVTWKSPLPTKQNGQIRGYQVTYVRLE 646

Query: 646 TGEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELIVNKG 699
            GE      + D   SE   A      P   Y I V    T+ DG  S  +++   G
Sbjct: 647 GGEPRGNPIIKDVMLSEAQDAVITGLSPETTYSITVAAYTTKGDGARSKPKVVSTTG 703



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 156/737 (21%), Positives = 261/737 (35%), Gaps = 87/737 (11%)

Query: 25  SASQNRHAPKQQYVTRKKEVALR------------NKKVELFCIFGGTPLPQTIWSKDGV 72
           SA     AP   YV R + VA R               V L C+  G P+P   W     
Sbjct: 209 SAGTRYSAPANLYV-RVRRVAPRFSIPPSNHEVMPGGSVNLTCVAVGAPMPYVKWMAGLE 267

Query: 73  PINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP 132
            +   D +  G  G  L        D  +YTC   + +G  ++ +  ++V A P    +P
Sbjct: 268 ELTKEDEMPVGRNGLEL----TNIKDSANYTCVAISSLGMIEAVA-QITVKALP----KP 318

Query: 133 EFINAAEEETVTFECKA--SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
                  E T T       SG P+P  ++V   KP +            +  + + +   
Sbjct: 319 PLDAMVTETTATSVTLTWDSGNPDPVSYYVIQYKPKA------------SESSFQEVDGV 366

Query: 191 DTGNYGCNATNSLG-YVYKDVYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPK 247
            T  Y     +    Y ++ + VN +   P  E+ EA   E       + +  R+  A  
Sbjct: 367 ATTRYSIGGLSPFSEYEFRIIAVNNIGRGPPSEVIEAQTGEQAPSSPPLKVQARMLSAST 426

Query: 248 PEVNWIHNQK---ELTGGR----------------YTILETGDLKITDVAFADSGEYTCF 288
             V W   ++   ++ G R                + +++     I  +    +      
Sbjct: 427 MLVQWDLPEEPNGQIRGFRVYYTTDPHLPFSMWQKHNVVDNHLTTIGSLTTGTTYSIRVL 486

Query: 289 ARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
           A   +G    S  + VK    +  QP D++ EA          +  P  +++   L   E
Sbjct: 487 AFTSVGDGPPSEIIQVKTQQGVPAQPVDFQAEAETDTRILLTWLLPPQERITKYELLYWE 546

Query: 349 PIDFESEPR-FVQSNDYSLTVTKSSELDSGQYTCRAQTELD-FIEAQATLTVQVPLEAPS 406
             + E     F  ++ Y++   K   L   +    + T +  +  A    T Q    AP 
Sbjct: 547 GTNGEQHKLLFHPASSYAVEGLKPDTLYHFRLAAWSDTGVGVYTPAIQATTAQSMPSAPP 606

Query: 407 NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI--VNKGESTT 464
               +  +++    V+W    P    G  RGY+V     + GE     +I  V   E+  
Sbjct: 607 RKVEVDSVNSTSVRVTWKSPLPTKQNGQIRGYQVTYVRLEGGEPRGNPIIKDVMLSEAQD 666

Query: 465 TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW 524
             +    P +     V A+    +G  S+     T   VPG    + +  + ++A  + W
Sbjct: 667 AVITGLSPETTYSITVAAYTTKGDGARSKPKVVSTTGAVPGKPTMMISTTVQNTAM-IHW 725

Query: 525 VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYIS-DPTTTSAKLAGLEPSTKYRIHLA 583
             P +  G L+GY+++Y+ V         +R   I          + GL     Y   L+
Sbjct: 726 HPPREIVGELLGYRLQYKRVDE-------DRFITIDFGKNEHHHTVTGLHKGASYIFKLS 778

Query: 584 GYTKAGDGAESKYLFY----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI 639
              +AG G E +        VP   P N++  G T +   +SW      E N     Y +
Sbjct: 779 AKNRAGAGEEYEKEISTPEEVPSGFPQNLQVVGLTTSTTEVSWEPPVLSERNGKITNYTV 838

Query: 640 FWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKG 699
            +R  N+     QD     R + + L N      Y+IK V+  T K G G +   I    
Sbjct: 839 VYRDINS----QQDLTNITRDTYITLVNLKPDTTYDIK-VRARTSK-GAGPLSPSI---- 888

Query: 700 ESTTTEVDKFVPASKNF 716
           +S T  VD+    +KNF
Sbjct: 889 QSRTMPVDQVF--AKNF 903


>gi|395825220|ref|XP_003785837.1| PREDICTED: LOW QUALITY PROTEIN: hemicentin-1 [Otolemur garnettii]
          Length = 5481

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/372 (30%), Positives = 177/372 (47%), Gaps = 11/372 (2%)

Query: 31   HAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI-NPSDRISQGNYGKSL 89
            H P +   T  +     N +  L C+  G P+P   W KD V + N   + S   YG+ L
Sbjct: 4090 HVPPRIRNTEVQYTVNENSQAILPCVADGIPIPTISWKKDNVLLANLLGKYSAEPYGE-L 4148

Query: 90   IIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA 149
            ++++VE  D G+YTC  +N  GE  ++S+ L+V   P FT  P  ++  + E +   CKA
Sbjct: 4149 VLENVELEDSGTYTCIANNTAGE-DTHSVSLTVHILPTFTELPGDVSLNKGEQLRLSCKA 4207

Query: 150  SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
            +G+P P++ W  N   I   P +     G + + IE + K D+G Y C A NS+G+V   
Sbjct: 4208 TGIPLPKLTWTFNNNII---PAHYDSVNGHSELVIERVSKEDSGTYVCTAENSVGFVKAI 4264

Query: 210  VYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILE 268
             +V V        + P +     G   +L C V G P P + W      +    R   L 
Sbjct: 4265 GFVYVKEPPVFKGDYPSNWIEPLGGNAILNCEVKGDPTPTIQWSRKGAGVEINHRIRQLG 4324

Query: 269  TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
             G L I      D+G+YTC A N+ G  + S SLT++    IT +P +  V AG S    
Sbjct: 4325 NGSLAIYGTVNEDAGDYTCIAANEAGIVERSMSLTLQSPPIITLEPVETVVHAGGSIVLN 4384

Query: 329  CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
            C A  +P    +I W R  + I ++   + +  +++SL +T +   D+  Y C A+  + 
Sbjct: 4385 CQAAGEP--HPTITWSRQGQSIPWDDRVKVL--SNHSLRITGARREDTSDYECVARNLMG 4440

Query: 389  FIEAQATLTVQV 400
             +  +  +TVQV
Sbjct: 4441 SVLVRVPVTVQV 4452



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 147/317 (46%), Gaps = 13/317 (4%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
           SL I+ V+FSD G Y C VS+  G A + S+ L+V   P  TV P+  +      V+  C
Sbjct: 575 SLEIRGVKFSDAGEYHCRVSSEGGSAAA-SVFLTVQEPPTVTVMPKNQSFTGGSEVSIMC 633

Query: 148 KASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVY 207
            A+G P+P++ W  N   I  +  +  R      + I+N    D G YGC A+NS G + 
Sbjct: 634 SATGYPKPKLTWTMNDMFIVAS--HRYRMTSEGTLFIKNAVPKDAGVYGCLASNSAG-ID 690

Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
           K   +     AP++     +     G T V+ C+  G P P+V W     EL    + I+
Sbjct: 691 KQTSILRYIEAPKLIVVQSELLVALGDTTVMECKTSGVPPPQVKWFKGDLELRSSTFLII 750

Query: 268 E--TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
           +   G LKI +    D+G+YTC A N  G A G  +L V  H     +P D  +E G + 
Sbjct: 751 DPFLGLLKIQETQDLDAGDYTCVAINDAGRATGRITLDVGSHPVFIQEPADISMEIGSNV 810

Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS----NDYSLTVTKSSELDSGQYTC 381
           T  C     P  K  I W R S+ +   S P  V S       +L +      D G Y C
Sbjct: 811 TLPCYVQGYPEPK--IQWRR-SDNMPIFSRPFSVSSISQLKTGALFILNLWASDKGTYIC 867

Query: 382 RAQTELDFIEAQATLTV 398
            A+ +   I+++AT+TV
Sbjct: 868 EAENQFGKIQSEATITV 884



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 167/382 (43%), Gaps = 23/382 (6%)

Query: 48   NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            N  + L+C     P P   W KDG P+  SD++     G+ L I   +  D G YTC   
Sbjct: 2799 NNPISLYCETNAAPPPTLTWYKDGRPLTSSDKVLILPGGRVLQIPRAKVEDAGRYTCVAV 2858

Query: 108  NGVGEAKSYSIDLSVLAAPYF----TVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
            N  GE  S   D+ VL  P      +  PE +     ++   EC +SG P P   W  +G
Sbjct: 2859 NEAGE-DSLQYDVRVLLPPIIKGANSDLPEEVTVLVNKSTRMECLSSGSPAPRNSWQKDG 2917

Query: 164  KPISQAPPNPRRKVGPNRIT-IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
            +P+ +   +  + +   RI  I N +  D G Y C A N+ G   K+  +NV      I 
Sbjct: 2918 QPLLED--DHHKFLSNGRILQILNTQLMDIGRYVCVAENTAGSAKKNFNLNVHVPPSVIG 2975

Query: 223  EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETG--DLKITDVAFA 280
              P++   V    + LTC V G P P+++W+ N++ +      ++  G   L+I     +
Sbjct: 2976 PNPENLTVVVNNFISLTCEVSGFPPPDLSWLKNEQPIKLSTNALIVPGGRTLQILRAKVS 3035

Query: 281  DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED----YEVEAGQSATFRC--NAVSD 334
            D GEYTC A ++ G ++   SLTV     I D   +      V  G S +  C  NAV  
Sbjct: 3036 DGGEYTCIAISQAGESKKKISLTVYVPPSIKDHGSESLSVVNVREGTSVSLECESNAVPP 3095

Query: 335  PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
            P     + W +    I  ES    + ++   L + K+   D+GQY CRA       +   
Sbjct: 3096 P----VVTWYKNGRMIT-ESTHLEILADGQMLHIKKAEVSDTGQYVCRAINVAGRDDKNF 3150

Query: 395  TLTVQVP--LEAPSNFTLIQVI 414
             L V VP  +E P    +++ I
Sbjct: 3151 HLNVYVPPSIEGPEKEVVVETI 3172



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 160/354 (45%), Gaps = 36/354 (10%)

Query: 51   VELFCIFGGTPLPQTIWSKDGVPI--NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
            + L C   G P P  IW K G P+  +   R+   + G+ L I   E SD G YTC  SN
Sbjct: 2221 ISLLCESSGIPPPNLIWKKKGSPVLADSMGRVRILSGGRQLQISIAEKSDAGLYTCVASN 2280

Query: 109  GVGEAKSYSIDLSVLAAPYFT---VEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
              G  K    +L V   P  T     P  I     ++V+ EC+  G+P P + W+ +G+P
Sbjct: 2281 VAGTTKK-DYNLQVYIRPTITNSGSHPTEIIVTRGKSVSLECEVQGMPPPTMTWIKDGRP 2339

Query: 166  ISQAPPNPRRKVGPNRIT-IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT-- 222
            +++        +   RI  ++N+  SDTG Y C A N  G   +   ++V  HAP     
Sbjct: 2340 VTKG--RGVEILDEGRILQLKNIHISDTGRYVCVAVNVAGMTDRKYDLSV--HAPPNIIG 2395

Query: 223  --EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWI---------HNQKELTGGRYTILETGD 271
               A ++   V+  +V LTC   G P P   W+         ++ + L+GGR        
Sbjct: 2396 NHRASENISVVEKNSVSLTCEASGIPLPSTTWLKDGWPISLSNSVRILSGGRM------- 2448

Query: 272  LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP--EDYEVEAGQSATFRC 329
            L++      D+G+YTC ARN  G  + +  L+V    HI  +   ED +V+  QS T  C
Sbjct: 2449 LRMMQTRMEDAGQYTCVARNAAGEERKTFGLSVLVPPHIVGENTLEDVKVKEKQSVTLLC 2508

Query: 330  NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
                +P  K  + W +  + I  E E   ++S  + L +T +    +G+Y C A
Sbjct: 2509 EVTGNPVPK--VTWHKDGQLIQ-EDEAHHIESGGHFLHITNAQVSHTGRYMCLA 2559



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 157/347 (45%), Gaps = 13/347 (3%)

Query: 44   VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
            + + N  +EL C   G+P P  +W KDG  I+  D +     G+ LII   + SD G Y 
Sbjct: 1752 IVMVNNLLELDCHVTGSPPPTIMWLKDGQLIDGRDGVKILLNGRKLIITQAQVSDTGLYQ 1811

Query: 104  CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFIN---AAEEETVTFECKASGLPEPEIHWV 160
            C  +N  G+ K    +++V   P  T++P  ++     + + VT +C A+G+P P I W+
Sbjct: 1812 CVATNTAGDHKK-EFEVTVHVPP--TIKPSGLSERAVVKYKPVTLQCIANGIPNPSITWL 1868

Query: 161  HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
             +G+P++ A  N + +     + I      D G Y C ATN+ G   + + ++V   AP 
Sbjct: 1869 KDGQPVNTAQGNLKIQSSGRVLQIAKALLEDAGRYTCVATNAAGETQQRIQLHV-HEAPR 1927

Query: 221  ITEAPK--DEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGR-YTILETGD-LKITD 276
            + EA K  +E  V    V L C+  G P P + W  + + L+G    T L  G  + I  
Sbjct: 1928 LEEAGKMLNETVVVNSPVQLECKAAGNPSPVITWYKDNRPLSGSSGITFLNRGQIINIES 1987

Query: 277  VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
               +D+G Y C A N  G  +   SL V     I+       V         C A   P+
Sbjct: 1988 AQISDAGLYKCVAINSAGATELFYSLQVHVPPSISGSNNMVAVVVNNLVRLECEARGIPA 2047

Query: 337  LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
              L+  WL+   P+   +    V S    L +T +   D+G YTC A
Sbjct: 2048 PSLT--WLKDGSPVSSFANGIQVLSGGRILALTSAQISDTGIYTCVA 2092



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 177/379 (46%), Gaps = 38/379 (10%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
            L N  ++L C   G P+P   W KDG P+  S +I   + G+ L I   + SD  +YTC 
Sbjct: 1567 LINSMIKLECETRGLPMPAITWYKDGQPVMSSSQILYIDKGQFLHIPRAQVSDSATYTCH 1626

Query: 106  VSNGVGEA-KSYSIDLSV-------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI 157
            V+N  G A KS+ +D+ V       LA P    +   IN     ++T ECKA+G P P +
Sbjct: 1627 VTNVAGTAEKSFHVDVYVPPVIEGDLATPLS--KQVVIN----HSLTLECKAAGNPPPVL 1680

Query: 158  HWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAH 217
             W+ +G P+ +A  N   + G  ++ I + ++ D G Y C AT+  G   K++   V   
Sbjct: 1681 TWLKDGIPV-KASDNILIEAGGKKLEIMSAQEVDQGQYVCVATSVAG--EKEIKYEVDVL 1737

Query: 218  APEITEAPKDEYT----VDGKTVVLTCRVFGAPKPEVNWIHNQKELTG--GRYTILETGD 271
             P + E   DE +    +    + L C V G+P P + W+ + + + G  G   +L    
Sbjct: 1738 VPPVVEG-GDETSYFIVMVNNLLELDCHVTGSPPPTIMWLKDGQLIDGRDGVKILLNGRK 1796

Query: 272  LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP---EDYEVEAGQSATFR 328
            L IT    +D+G Y C A N  G  +    +TV  H   T +P    +  V   +  T +
Sbjct: 1797 LIITQAQVSDTGLYQCVATNTAGDHKKEFEVTV--HVPPTIKPSGLSERAVVKYKPVTLQ 1854

Query: 329  C--NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
            C  N + +P    SI WL+  +P++       +QS+   L + K+   D+G+YTC A   
Sbjct: 1855 CIANGIPNP----SITWLKDGQPVNTAQGNLKIQSSGRVLQIAKALLEDAGRYTCVATNA 1910

Query: 387  LDFIEAQATLTVQVPLEAP 405
                + +  L V    EAP
Sbjct: 1911 AGETQQRIQLHVH---EAP 1926



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 153/365 (41%), Gaps = 14/365 (3%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
            L N+   LFC   GTP P   W KD V +  S  +   N GK L +      D G Y C+
Sbjct: 1380 LVNQLTSLFCEVEGTPSPIITWYKDDVQVTESSAVQIVNNGKILKLFKATPEDAGRYYCK 1439

Query: 106  VSNGVGEAKSYSIDLSVLAAPYFT--VEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
              N  G ++ Y   + VL  P  T    P  ++       T EC+A G P P IHW  +G
Sbjct: 1440 AINIAGTSQKY-FHIDVLVPPTITGASSPNEVSVILNHDTTLECQARGNPFPAIHWFKDG 1498

Query: 164  KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT- 222
            KP+    PN         + ++  R+SD G Y C  +N+ G   KD+ + +    P I  
Sbjct: 1499 KPLFLGDPNIELLDRGQVLHLKKARRSDKGRYQCTVSNAAGKQAKDIKLTIYI-PPSIKG 1557

Query: 223  -EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN-QKELTGGRYTILETGD-LKITDVAF 279
                 +   +    + L C   G P P + W  + Q  ++  +   ++ G  L I     
Sbjct: 1558 GNVTAEISVLINSMIKLECETRGLPMPAITWYKDGQPVMSSSQILYIDKGQFLHIPRAQV 1617

Query: 280  ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ---PEDYEVEAGQSATFRCNAVSDPS 336
            +DS  YTC   N  GTA+ S  + V     I      P   +V    S T  C A  +P 
Sbjct: 1618 SDSATYTCHVTNVAGTAEKSFHVDVYVPPVIEGDLATPLSKQVVINHSLTLECKAAGNPP 1677

Query: 337  LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              L+  WL+   P+   S+   +++    L +  + E+D GQY C A +     E +  +
Sbjct: 1678 PVLT--WLKDGIPVK-ASDNILIEAGGKKLEIMSAQEVDQGQYVCVATSVAGEKEIKYEV 1734

Query: 397  TVQVP 401
             V VP
Sbjct: 1735 DVLVP 1739



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 158/370 (42%), Gaps = 18/370 (4%)

Query: 44   VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
            +  R K V L C   G P P   W KDG P+     +   + G+ L +K++  SD G Y 
Sbjct: 2310 IVTRGKSVSLECEVQGMPPPTMTWIKDGRPVTKGRGVEILDEGRILQLKNIHISDTGRYV 2369

Query: 104  CEVSNGVGEAKSYSIDLSVLAAPYFT---VEPEFINAAEEETVTFECKASGLPEPEIHWV 160
            C   N  G       DLSV A P         E I+  E+ +V+  C+ASG+P P   W+
Sbjct: 2370 CVAVNVAG-MTDRKYDLSVHAPPNIIGNHRASENISVVEKNSVSLTCEASGIPLPSTTWL 2428

Query: 161  HNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
             +G PIS +  N  R +   R + +   R  D G Y C A N+ G   K   ++VL    
Sbjct: 2429 KDGWPISLS--NSVRILSGGRMLRMMQTRMEDAGQYTCVARNAAGEERKTFGLSVLVPPH 2486

Query: 220  EITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD--LKITD 276
             + E   ++  V  K +V L C V G P P+V W  + + +       +E+G   L IT+
Sbjct: 2487 IVGENTLEDVKVKEKQSVTLLCEVTGNPVPKVTWHKDGQLIQEDEAHHIESGGHFLHITN 2546

Query: 277  VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT-----DQPEDYEVEAGQSATFRCNA 331
               + +G Y C A N  G    S SL V     I         ED  V      +  C A
Sbjct: 2547 AQVSHTGRYMCLASNTAGDKSKSFSLNVFVSPTIAGVDGDGSHEDVTVILNSPTSLVCEA 2606

Query: 332  VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
             S P    +I W +   P++     R +     +L +  + E ++G+Y+C A  E   + 
Sbjct: 2607 YSYP--PATITWFKDGAPLESNQNIRILPGG-RTLQILNAQEDNAGRYSCVATNEAGEMI 2663

Query: 392  AQATLTVQVP 401
                + V +P
Sbjct: 2664 KHYEVKVYIP 2673



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 155/382 (40%), Gaps = 18/382 (4%)

Query: 32   APKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLII 91
            APK   V  +  VAL +  V + C   G P PQ  W K  + +  S  +    +   L I
Sbjct: 701  APKLIVVQSELLVALGDTTV-MECKTSGVPPPQVKWFKGDLELRSSTFLIIDPFLGLLKI 759

Query: 92   KHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASG 151
            +  +  D G YTC   N  G A    I L V + P F  EP  I+      VT  C   G
Sbjct: 760  QETQDLDAGDYTCVAINDAGRATG-RITLDVGSHPVFIQEPADISMEIGSNVTLPCYVQG 818

Query: 152  LPEPEIHWVH-NGKPISQAP--PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYK 208
             PEP+I W   +  PI   P   +   ++    + I NL  SD G Y C A N  G +  
Sbjct: 819  YPEPKIQWRRSDNMPIFSRPFSVSSISQLKTGALFILNLWASDKGTYICEAENQFGKIQS 878

Query: 209  DVYVNVLAH-APEITEAPKDEYTVDGKTVVLTCRVF-GAPKPEVNWIHNQKEL------- 259
            +  + V    AP I  +P     ++G+ + L C +  G P PE  W+ N   +       
Sbjct: 879  EATITVTGLVAPLIGISPPVANVIEGQQLTLPCSLLAGNPIPERRWLKNSAMVRTFXMHA 938

Query: 260  -TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYE 318
             T   + +   G L I  +   D GEYTC A N  GT   + S+ V     I    +   
Sbjct: 939  STLPIFXVRSNGSLHIERIQLPDGGEYTCVASNVAGTNNKTTSVVVHVLPTIQHGQQVLS 998

Query: 319  VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQ 378
               G   T  C A   P  K S++W +  E I   S  +F    D SL V      +SG+
Sbjct: 999  TIEGVPVTLPCRASGIP--KPSVIWSKKGELISTGSA-KFSAGADGSLYVVSPGGEESGE 1055

Query: 379  YTCRAQTELDFIEAQATLTVQV 400
            Y C A     +   +  LTV V
Sbjct: 1056 YVCTATNAAGYARRKVQLTVYV 1077



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 181/411 (44%), Gaps = 52/411 (12%)

Query: 51   VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            V L C   G PLP T W KDG PI+ S+ +   + G+ L +      D G YTC   N  
Sbjct: 2411 VSLTCEASGIPLPSTTWLKDGWPISLSNSVRILSGGRMLRMMQTRMEDAGQYTCVARNAA 2470

Query: 111  GEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQ 168
            GE +  +  LSVL  P+   E   E +   E+++VT  C+ +G P P++ W  +G+ I +
Sbjct: 2471 GEERK-TFGLSVLVPPHIVGENTLEDVKVKEKQSVTLLCEVTGNPVPKVTWHKDGQLIQE 2529

Query: 169  APPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
               +   + G + + I N + S TG Y C A+N+ G   K   +NV   +P I     D 
Sbjct: 2530 DEAH-HIESGGHFLHITNAQVSHTGRYMCLASNTAGDKSKSFSLNVFV-SPTIAGVDGDG 2587

Query: 229  YTVDGKTVV-----LTCRVFGAPKPEVNWI---------HNQKELTGGRYTILETGDLKI 274
               D   ++     L C  +  P   + W           N + L GGR        L+I
Sbjct: 2588 SHEDVTVILNSPTSLVCEAYSYPPATITWFKDGAPLESNQNIRILPGGR-------TLQI 2640

Query: 275  TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD--------QPEDYEVEAGQSAT 326
             +    ++G Y+C A N+ G       + V     I           P++ +++   + T
Sbjct: 2641 LNAQEDNAGRYSCVATNEAGEMIKHYEVKVYIPPIIKKGDILGPGLSPKEVKIKVNNTLT 2700

Query: 327  FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA--- 383
              C A + PS  LS  W +  +P+  +     + +N ++L + ++   D+G+YTC A   
Sbjct: 2701 LECEAYAIPSASLS--WYKDGQPLKSDDHVN-IAANGHTLQIKEAQISDTGRYTCVASNI 2757

Query: 384  --QTELDFIEAQATLTVQVPLEAPSNFTLIQVIDA-----KKAVVSWNPVS 427
              + ELDF      + +QVP      + +  ++D+      K V+  NP+S
Sbjct: 2758 AGEDELDF-----DVNIQVPPSFQKLWEMGNMLDSGRSGEAKDVIINNPIS 2803



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 158/378 (41%), Gaps = 36/378 (9%)

Query: 42   KEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY-----GKSLIIKHVEF 96
            +   ++ K V L CI  G P P   W KDG P+N     +QGN      G+ L I     
Sbjct: 1842 ERAVVKYKPVTLQCIANGIPNPSITWLKDGQPVN----TAQGNLKIQSSGRVLQIAKALL 1897

Query: 97   SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFIN--AAEEETVTFECKASGLPE 154
             D G YTC  +N  GE +   I L V  AP      + +N        V  ECKA+G P 
Sbjct: 1898 EDAGRYTCVATNAAGETQQ-RIQLHVHEAPRLEEAGKMLNETVVVNSPVQLECKAAGNPS 1956

Query: 155  PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
            P I W  + +P+S +        G   I IE+ + SD G Y C A NS G    +++ ++
Sbjct: 1957 PVITWYKDNRPLSGSSGITFLNRG-QIINIESAQISDAGLYKCVAINSAGAT--ELFYSL 2013

Query: 215  LAHA-PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ----------KELTGGR 263
              H  P I+ +      V    V L C   G P P + W+ +           + L+GGR
Sbjct: 2014 QVHVPPSISGSNNMVAVVVNNLVRLECEARGIPAPSLTWLKDGSPVSSFANGIQVLSGGR 2073

Query: 264  YTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQ 323
                    L +T    +D+G YTC A N  G  Q    L V    +I  + ++  V  GQ
Sbjct: 2074 I-------LALTSAQISDTGIYTCVAVNAAGEKQRDIDLRVYAPPNIMGEEQNVSVIIGQ 2126

Query: 324  SATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            +    C + + PS  L+  WL+    +  +     V  N   L +  +   D+G+YTC A
Sbjct: 2127 AVELLCQSDAIPSPTLT--WLKDGRHL-LKKPGLTVSENGSVLKIEDAQVQDTGRYTCEA 2183

Query: 384  QTELDFIEAQATLTVQVP 401
                   E    + + VP
Sbjct: 2184 TNVAGKTEKNYNVNIWVP 2201



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 161/380 (42%), Gaps = 19/380 (5%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
            L NK   + C+  G+P P+  W KDG P+   D     + G+ L I + +  D G Y C 
Sbjct: 2892 LVNKSTRMECLSSGSPAPRNSWQKDGQPLLEDDHHKFLSNGRILQILNTQLMDIGRYVCV 2951

Query: 106  VSNGVGEAKSYSIDLSVLAAP-YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N  G AK  + +L+V   P      PE +       ++  C+ SG P P++ W+ N +
Sbjct: 2952 AENTAGSAKK-NFNLNVHVPPSVIGPNPENLTVVVNNFISLTCEVSGFPPPDLSWLKNEQ 3010

Query: 165  PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            PI  +  N     G   + I   + SD G Y C A +  G   K + + V    P I + 
Sbjct: 3011 PIKLS-TNALIVPGGRTLQILRAKVSDGGEYTCIAISQAGESKKKISLTVYV-PPSIKDH 3068

Query: 225  PKDEYTV----DGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT-ILETGD-LKITDVA 278
              +  +V    +G +V L C     P P V W  N + +T   +  IL  G  L I    
Sbjct: 3069 GSESLSVVNVREGTSVSLECESNAVPPPVVTWYKNGRMITESTHLEILADGQMLHIKKAE 3128

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA-GQSATFRCNAVSDPSL 337
             +D+G+Y C A N  G    +  L V     I    ++  VE      T  C+A   P  
Sbjct: 3129 VSDTGQYVCRAINVAGRDDKNFHLNVYVPPSIEGPEKEVVVETISNPVTLTCDATGIPPP 3188

Query: 338  KLSIVWLRGSEPID-FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
               I WL+   PI+  +S    + S    L + +S   DSG YTC A       +    L
Sbjct: 3189 M--IAWLKNRRPIENSDSLEVHILSGGSKLQIARSQPSDSGNYTCIASNTEGKAQKSYIL 3246

Query: 397  TVQVP-----LEAPSNFTLI 411
            +VQVP      E PS+ +++
Sbjct: 3247 SVQVPPSVAGAEIPSDVSVL 3266



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 167/382 (43%), Gaps = 20/382 (5%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPS--DRISQGNYGKSLIIKHVEFSDQGSYT 103
            L  + VEL C   G P P   W KDG P+  +  +RI     G +L I     SD G YT
Sbjct: 3266 LLGENVELVCKANGIPAPLIQWLKDGKPLTSAKRERIRVTANGSTLNIYGAITSDMGKYT 3325

Query: 104  CEVSNGVGEAKSYSIDLSVLAAPYFT---VEPEFINAAEEETVTFECKASGLPEPEIHWV 160
            C  +N  GE      +L+V   P       E E + A  + ++  EC+A+G+P P+I W+
Sbjct: 3326 CVATNPAGEEDRI-FNLNVYVPPTINGNKEEAEKLMALVDTSINIECRATGMPPPQISWL 3384

Query: 161  HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
             NG P+  +  + R       I I   + SD   Y C A+N  G   K   + VL     
Sbjct: 3385 KNGLPLPLSS-HIRLLAAGQVIRIVRAQLSDVAVYTCVASNRAGVDNKHYDLQVLVPPNM 3443

Query: 221  ITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD--LKITDV 277
                  +E TV    +  +TC   G P P ++W+ +   L    + +++T    L++   
Sbjct: 3444 DNAMGTEEITVLKDSSTSMTCISDGTPMPSMSWLRDSLSLEPDDHLMIDTQGMVLQLIKA 3503

Query: 278  AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDP 335
               DSG YTC A N+ G       L V E  HI  +++P +  V         C A   P
Sbjct: 3504 ETEDSGRYTCVASNEAGEVSKHFILKVLEPPHINGSEEPGEISVIVNNPLELTCIASGIP 3563

Query: 336  SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
            + K  I W++   P+    + + +   +  L ++ +   D+G+YTC A +     + +  
Sbjct: 3564 APK--ITWMKDGRPLPQTDQVQTLGGGEI-LQISSAQVEDTGRYTCLASSPAGDDDKEYL 3620

Query: 396  LTVQVP-----LEAPSNFTLIQ 412
            + V VP      + P  F++++
Sbjct: 3621 VRVHVPPNIAGTDEPQGFSVLR 3642



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 151/412 (36%), Gaps = 65/412 (15%)

Query: 44   VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKS-------LIIKHVEF 96
            + L +K   L CI  G P P+  W KDG        +  GN+ +        L I+  + 
Sbjct: 3692 IILLSKSTLLECIAEGVPTPRITWRKDGA-------VLSGNHARYSVLENGFLHIQSAQV 3744

Query: 97   SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE 156
            +D G Y C  +N  G      IDL V   P  +     I        T  C+A+G+P+P 
Sbjct: 3745 TDTGRYLCMATNAAG-TDHRRIDLQVHVPPSISPGLTNITVTVNVQTTLACEATGIPKPS 3803

Query: 157  IHWVHNGKPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVL 215
            IHW  NG  ++     N  R +    + I +    DT  Y C  TN  G   + + + V 
Sbjct: 3804 IHWRKNGHLLNVDQNQNSYRLLSSGSLVIISPSVDDTATYECTVTNDAGEDKRTIDLTVQ 3863

Query: 216  AHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT--GGRYTILETGDLK 273
               P I + P D         V+TC   G P P ++W  N   L   G  Y IL +G ++
Sbjct: 3864 V-PPSIADEPTDFLITKHAPAVITCTASGVPFPSIHWTKNGIRLLPRGDGYRILSSGAIE 3922

Query: 274  ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVS 333
            I       +G YTC ARN  G+     +L V+E   I  QP + +V         C A  
Sbjct: 3923 IFAAQLNHAGRYTCVARNSAGSVHRHVTLHVQEPPVIQPQPSELDVILNNPILLPCEATG 3982

Query: 334  DPSLKLS--------------------------------------------IVWLRGSEP 349
             PS  ++                                            + W +    
Sbjct: 3983 TPSPFITWQKEGINVITSVPPVISPHPKEHVVAVDKPLVLPCQADGLPSPDVTWQKDGRA 4042

Query: 350  IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            +      R + S   SL +  +   D+GQYTC A        A   LTV VP
Sbjct: 4043 VVDSVRQRVLSSG--SLQIAFAQPQDAGQYTCTAANVAGSSSASTKLTVHVP 4092



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 154/346 (44%), Gaps = 9/346 (2%)

Query: 43   EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
            E  + N  V+L C   G P P   W KD  P++ S  I+  N G+ + I+  + SD G Y
Sbjct: 1937 ETVVVNSPVQLECKAAGNPSPVITWYKDNRPLSGSSGITFLNRGQIINIESAQISDAGLY 1996

Query: 103  TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
             C   N  G  + +   L V   P  +     +       V  EC+A G+P P + W+ +
Sbjct: 1997 KCVAINSAGATELF-YSLQVHVPPSISGSNNMVAVVVNNLVRLECEARGIPAPSLTWLKD 2055

Query: 163  GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
            G P+S      +   G   + + + + SDTG Y C A N+ G   +D+ + V A  P I 
Sbjct: 2056 GSPVSSFANGIQVLSGGRILALTSAQISDTGIYTCVAVNAAGEKQRDIDLRVYA-PPNIM 2114

Query: 223  EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGD-LKITDVAFA 280
               ++   + G+ V L C+    P P + W+ + + L      T+ E G  LKI D    
Sbjct: 2115 GEEQNVSVIIGQAVELLCQSDAIPSPTLTWLKDGRHLLKKPGLTVSENGSVLKIEDAQVQ 2174

Query: 281  DSGEYTCFARNKLGTAQGSGSLT--VKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
            D+G YTC A N  G  + + ++   V  + + +D+     V  G   +  C +   P   
Sbjct: 2175 DTGRYTCEATNVAGKTEKNYNVNIWVPPNIYGSDELAQLTVIEGNLISLLCESSGIPPPN 2234

Query: 339  LSIVWLRGSEPIDFESEPRF-VQSNDYSLTVTKSSELDSGQYTCRA 383
            L  +W +   P+  +S  R  + S    L ++ + + D+G YTC A
Sbjct: 2235 L--IWKKKGSPVLADSMGRVRILSGGRQLQISIAEKSDAGLYTCVA 2278



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 164/374 (43%), Gaps = 17/374 (4%)

Query: 41   KKEVALR--NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQG--NYGKSLIIKHVEF 96
            +KEV +   +  V L C   G P P   W K+  PI  SD +     + G  L I   + 
Sbjct: 3164 EKEVVVETISNPVTLTCDATGIPPPMIAWLKNRRPIENSDSLEVHILSGGSKLQIARSQP 3223

Query: 97   SDQGSYTCEVSNGVGEA-KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEP 155
            SD G+YTC  SN  G+A KSY + + V  +      P  ++    E V   CKA+G+P P
Sbjct: 3224 SDSGNYTCIASNTEGKAQKSYILSVQVPPSVAGAEIPSDVSVLLGENVELVCKANGIPAP 3283

Query: 156  EIHWVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
             I W+ +GKP++ A    R +V  N   + I     SD G Y C ATN  G   +D   N
Sbjct: 3284 LIQWLKDGKPLTSA-KRERIRVTANGSTLNIYGAITSDMGKYTCVATNPAG--EEDRIFN 3340

Query: 214  VLAHAPEITEAPKDE----YTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILE 268
            +  + P      K+E      +   ++ + CR  G P P+++W+ N   L       +L 
Sbjct: 3341 LNVYVPPTINGNKEEAEKLMALVDTSINIECRATGMPPPQISWLKNGLPLPLSSHIRLLA 3400

Query: 269  TGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
             G  ++I     +D   YTC A N+ G       L V    ++ +     E+   + ++ 
Sbjct: 3401 AGQVIRIVRAQLSDVAVYTCVASNRAGVDNKHYDLQVLVPPNMDNAMGTEEITVLKDSST 3460

Query: 328  RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
                +SD +   S+ WLR S  ++ +     + +    L + K+   DSG+YTC A  E 
Sbjct: 3461 SMTCISDGTPMPSMSWLRDSLSLEPDDH-LMIDTQGMVLQLIKAETEDSGRYTCVASNEA 3519

Query: 388  DFIEAQATLTVQVP 401
              +     L V  P
Sbjct: 3520 GEVSKHFILKVLEP 3533



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 160/366 (43%), Gaps = 28/366 (7%)

Query: 52   ELFCIFGGTPLPQTIWSKDGVPINP-SDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
             L C   G P P   W KDG P++  ++ I   + G+ L +   + SD G YTC   N  
Sbjct: 2037 RLECEARGIPAPSLTWLKDGSPVSSFANGIQVLSGGRILALTSAQISDTGIYTCVAVNAA 2096

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAP 170
            GE K   IDL V A P    E + ++    + V   C++  +P P + W+ +G+ + + P
Sbjct: 2097 GE-KQRDIDLRVYAPPNIMGEEQNVSVIIGQAVELLCQSDAIPSPTLTWLKDGRHLLKKP 2155

Query: 171  PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI--TEAPKDE 228
                 + G + + IE+ +  DTG Y C ATN  G   K+  VN+    P I  ++     
Sbjct: 2156 GLTVSENG-SVLKIEDAQVQDTGRYTCEATNVAGKTEKNYNVNIWV-PPNIYGSDELAQL 2213

Query: 229  YTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG---GRYTILETG-DLKITDVAFADSGE 284
              ++G  + L C   G P P + W      +     GR  IL  G  L+I+    +D+G 
Sbjct: 2214 TVIEGNLISLLCESSGIPPPNLIWKKKGSPVLADSMGRVRILSGGRQLQISIAEKSDAGL 2273

Query: 285  YTCFARNKLGTAQGSGSLTVKEHTHITD---QPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            YTC A N  GT +   +L V     IT+    P +  V  G+S +  C     P   ++ 
Sbjct: 2274 YTCVASNVAGTTKKDYNLQVYIRPTITNSGSHPTEIIVTRGKSVSLECEVQGMPPPTMT- 2332

Query: 342  VWLRGSEP------IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
             W++   P      ++   E R +Q  +  ++       D+G+Y C A       + +  
Sbjct: 2333 -WIKDGRPVTKGRGVEILDEGRILQLKNIHIS-------DTGRYVCVAVNVAGMTDRKYD 2384

Query: 396  LTVQVP 401
            L+V  P
Sbjct: 2385 LSVHAP 2390



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 152/363 (41%), Gaps = 11/363 (3%)

Query: 41   KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQG 100
            K+ V   +K + L C   G P P   W KDG  +  S R    + G SL I   +  D G
Sbjct: 4010 KEHVVAVDKPLVLPCQADGLPSPDVTWQKDGRAVVDSVRQRVLSSG-SLQIAFAQPQDAG 4068

Query: 101  SYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV 160
             YTC  +N  G + S S  L+V   P            E       C A G+P P I W 
Sbjct: 4069 QYTCTAANVAGSS-SASTKLTVHVPPRIRNTEVQYTVNENSQAILPCVADGIPIPTISWK 4127

Query: 161  HNGKPISQAPPNPRRKVGP-NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
             +   +  A    +    P   + +EN+   D+G Y C A N+ G     V + V    P
Sbjct: 4128 KDN--VLLANLLGKYSAEPYGELVLENVELEDSGTYTCIANNTAGEDTHSVSLTVHI-LP 4184

Query: 220  EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAF 279
              TE P D     G+ + L+C+  G P P++ W  N   +     ++    +L I  V+ 
Sbjct: 4185 TFTELPGDVSLNKGEQLRLSCKATGIPLPKLTWTFNNNIIPAHYDSVNGHSELVIERVSK 4244

Query: 280  ADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT-DQPEDYEVEAGQSATFRCNAVSDPSLK 338
             DSG Y C A N +G  +  G + VKE      D P ++    G +A   C    DP+  
Sbjct: 4245 EDSGTYVCTAENSVGFVKAIGFVYVKEPPVFKGDYPSNWIEPLGGNAILNCEVKGDPT-- 4302

Query: 339  LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
             +I W R    ++     R  Q  + SL +  +   D+G YTC A  E   +E   +LT+
Sbjct: 4303 PTIQWSRKGAGVEINH--RIRQLGNGSLAIYGTVNEDAGDYTCIAANEAGIVERSMSLTL 4360

Query: 399  QVP 401
            Q P
Sbjct: 4361 QSP 4363



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 166/386 (43%), Gaps = 32/386 (8%)

Query: 46   LRNKKVELFC-IFGGTPLPQTIWSKDGVPIN------PSDRISQGNYGKSLIIKHVEFSD 98
            +  +++ L C +  G P+P+  W K+   +        +  I       SL I+ ++  D
Sbjct: 902  IEGQQLTLPCSLLAGNPIPERRWLKNSAMVRTFXMHASTLPIFXVRSNGSLHIERIQLPD 961

Query: 99   QGSYTCEVSNGVG-EAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI 157
             G YTC  SN  G   K+ S+ + VL  P      + ++  E   VT  C+ASG+P+P +
Sbjct: 962  GGEYTCVASNVAGTNNKTTSVVVHVL--PTIQHGQQVLSTIEGVPVTLPCRASGIPKPSV 1019

Query: 158  HWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
             W   G+ IS    + +   G +  + + +    ++G Y C ATN+ GY  + V + V  
Sbjct: 1020 IWSKKGELISTG--SAKFSAGADGSLYVVSPGGEESGEYVCTATNAAGYARRKVQLTVYV 1077

Query: 217  HAPEI--------TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT--GGRYTI 266
              P +         + P +   + G+ V L C V   P P + W    + ++    R+  
Sbjct: 1078 R-PRVFGDLRGLSQDKPVEISVLAGEEVTLPCEVKSLPPPIITWAKETQLISPFSPRHMF 1136

Query: 267  LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
            L +G +KI++   +D+G Y C A N  G       L V     I   P+  +V+ GQ   
Sbjct: 1137 LPSGSMKISETRLSDTGMYLCVATNIAGNVTQYVKLNVHVPPKIQRGPKQMKVQVGQRVD 1196

Query: 327  FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
              CN    P+    I W +    +      + + S D +L++  +   D+G YTC A   
Sbjct: 1197 ILCNVQGTPA--PVITWHKDRSSV-LADGVQHISSPDGTLSIQHAMPADAGVYTCVATNI 1253

Query: 387  LDFIEAQATLTVQVP-----LEAPSN 407
                E + TL VQ P     LE P N
Sbjct: 1254 AGSDETEITLHVQEPPTLEDLEPPYN 1279



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 165/434 (38%), Gaps = 76/434 (17%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
            L++    + CI  GTP+P   W +D + + P D +     G  L +   E  D G YTC 
Sbjct: 3455 LKDSSTSMTCISDGTPMPSMSWLRDSLSLEPDDHLMIDTQGMVLQLIKAETEDSGRYTCV 3514

Query: 106  VSNGVGEAKSYSIDLSVLAAPYF--TVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
             SN  GE   + I L VL  P+   + EP  I+      +   C ASG+P P+I W+ +G
Sbjct: 3515 ASNEAGEVSKHFI-LKVLEPPHINGSEEPGEISVIVNNPLELTCIASGIPAPKITWMKDG 3573

Query: 164  KPISQAPPNPRRKVGPNRIT-IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--- 219
            +P+ Q   +  + +G   I  I + +  DTG Y C A++  G   K+  V V  H P   
Sbjct: 3574 RPLPQT--DQVQTLGGGEILQISSAQVEDTGRYTCLASSPAGDDDKEYLVRV--HVPPNI 3629

Query: 220  EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT---------------GGRY 264
              T+ P+    +  + V L C+    P P + W+ N + L                GG  
Sbjct: 3630 AGTDEPQGFSVLRNRQVTLECKSDAVPPPVITWLKNGERLQLVVGSGRKKVPPSIKGGSQ 3689

Query: 265  TIL----------------------------------------ETGDLKITDVAFADSGE 284
            +++                                        E G L I      D+G 
Sbjct: 3690 SLIILLSKSTLLECIAEGVPTPRITWRKDGAVLSGNHARYSVLENGFLHIQSAQVTDTGR 3749

Query: 285  YTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWL 344
            Y C A N  GT      L V     I+    +  V      T  C A   P  K SI W 
Sbjct: 3750 YLCMATNAAGTDHRRIDLQVHVPPSISPGLTNITVTVNVQTTLACEATGIP--KPSIHWR 3807

Query: 345  RGSEPIDFESEP---RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            +    ++ +      R + S   SL +   S  D+  Y C    +    +    LTVQVP
Sbjct: 3808 KNGHLLNVDQNQNSYRLLSSG--SLVIISPSVDDTATYECTVTNDAGEDKRTIDLTVQVP 3865

Query: 402  ---LEAPSNFTLIQ 412
                + P++F + +
Sbjct: 3866 PSIADEPTDFLITK 3879



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 97/398 (24%), Positives = 158/398 (39%), Gaps = 59/398 (14%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
            + C   G P P   W+K+G+ + P     +     ++ I   + +  G YTC   N  G 
Sbjct: 3885 ITCTASGVPFPSIHWTKNGIRLLPRGDGYRILSSGAIEIFAAQLNHAGRYTCVARNSAGS 3944

Query: 113  AKSYSI--------------DLSVLA--------------APYFTVEPEFINA------- 137
               +                +L V+               +P+ T + E IN        
Sbjct: 3945 VHRHVTLHVQEPPVIQPQPSELDVILNNPILLPCEATGTPSPFITWQKEGINVITSVPPV 4004

Query: 138  ----------AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENL 187
                      A ++ +   C+A GLP P++ W  +G+ +  +    +R +    + I   
Sbjct: 4005 ISPHPKEHVVAVDKPLVLPCQADGLPSPDVTWQKDGRAVVDS--VRQRVLSSGSLQIAFA 4062

Query: 188  RKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKT-VVLTCRVFGAP 246
            +  D G Y C A N  G       + V  H P      + +YTV+  +  +L C   G P
Sbjct: 4063 QPQDAGQYTCTAANVAGSSSASTKLTV--HVPPRIRNTEVQYTVNENSQAILPCVADGIP 4120

Query: 247  KPEVNWIHNQKELTG--GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTV 304
             P ++W  +   L    G+Y+    G+L + +V   DSG YTC A N  G    S SLTV
Sbjct: 4121 IPTISWKKDNVLLANLLGKYSAEPYGELVLENVELEDSGTYTCIANNTAGEDTHSVSLTV 4180

Query: 305  KEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDY 364
                  T+ P D  +  G+     C A   P  KL+  +     P  ++S       N +
Sbjct: 4181 HILPTFTELPGDVSLNKGEQLRLSCKATGIPLPKLTWTFNNNIIPAHYDS------VNGH 4234

Query: 365  S-LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            S L + + S+ DSG Y C A+  + F++A   + V+ P
Sbjct: 4235 SELVIERVSKEDSGTYVCTAENSVGFVKAIGFVYVKEP 4272



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 154/366 (42%), Gaps = 29/366 (7%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           PK Q  T   EV++        C   G P P+  W+ + + I  S R    + G +L IK
Sbjct: 618 PKNQSFTGGSEVSI-------MCSATGYPKPKLTWTMNDMFIVASHRYRMTSEG-TLFIK 669

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGL 152
           +    D G Y C  SN  G  K  SI   + A     V+ E + A  + TV  ECK SG+
Sbjct: 670 NAVPKDAGVYGCLASNSAGIDKQTSILRYIEAPKLIVVQSELLVALGDTTV-MECKTSGV 728

Query: 153 PEPEIHWVHNGKPISQAPPNPRRKVGP--NRITIENLRKSDTGNYGCNATNSLGYVYKDV 210
           P P++ W      +  +       + P    + I+  +  D G+Y C A N  G     +
Sbjct: 729 PPPQVKWFKGDLELRSS---TFLIIDPFLGLLKIQETQDLDAGDYTCVAINDAGRATGRI 785

Query: 211 YVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ------KELTGGRY 264
            ++V +H P   + P D     G  V L C V G P+P++ W  +       +  +    
Sbjct: 786 TLDVGSH-PVFIQEPADISMEIGSNVTLPCYVQGYPEPKIQWRRSDNMPIFSRPFSVSSI 844

Query: 265 TILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAG 322
           + L+TG L I ++  +D G Y C A N+ G  Q   ++TV       I   P    V  G
Sbjct: 845 SQLKTGALFILNLWASDKGTYICEAENQFGKIQSEATITVTGLVAPLIGISPPVANVIEG 904

Query: 323 QSATFRCNAVSDPSLKLSIVWLRGSEPI-----DFESEPRFVQSNDYSLTVTKSSELDSG 377
           Q  T  C+ ++   +     WL+ S  +        + P F   ++ SL + +    D G
Sbjct: 905 QQLTLPCSLLAGNPIP-ERRWLKNSAMVRTFXMHASTLPIFXVRSNGSLHIERIQLPDGG 963

Query: 378 QYTCRA 383
           +YTC A
Sbjct: 964 EYTCVA 969



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 167/417 (40%), Gaps = 31/417 (7%)

Query: 7    SEYKIGNRILLNVIATGISAS------QNRHAPKQQYVTRKKEVALRNKKVELFCIFGGT 60
            SE ++ +  +   +AT I+ +       N H P +     K+      ++V++ C   GT
Sbjct: 1145 SETRLSDTGMYLCVATNIAGNVTQYVKLNVHVPPKIQRGPKQMKVQVGQRVDILCNVQGT 1204

Query: 61   PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDL 120
            P P   W KD   +         +   +L I+H   +D G YTC  +N  G  ++  I L
Sbjct: 1205 PAPVITWHKDRSSVLADGVQHISSPDGTLSIQHAMPADAGVYTCVATNIAGSDET-EITL 1263

Query: 121  SVLAAPYF-TVEPEFINAAEEETV----TFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
             V   P    +EP +    +E  V     F C A G P+P I W+HNG+ ++   P    
Sbjct: 1264 HVQEPPTLEDLEPPYNTPFQERVVNQRIAFPCPAKGTPQPTIKWLHNGRELTGQEPGISI 1323

Query: 176  KVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKT 235
                  + I ++   D G Y C A N  G   +    N+  H P +    KD+  V   +
Sbjct: 1324 LEDGTLLMIASVTPFDNGEYICVAVNEAGTTERK--YNLKVHVPPVI---KDKEQVTNVS 1378

Query: 236  VV------LTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGD-LKITDVAFADSGEYTC 287
            V+      L C V G P P + W  +  ++T      I+  G  LK+      D+G Y C
Sbjct: 1379 VLVNQLTSLFCEVEGTPSPIITWYKDDVQVTESSAVQIVNNGKILKLFKATPEDAGRYYC 1438

Query: 288  FARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLR 345
             A N  GT+Q    + V     IT    P +  V      T  C A  +P    +I W +
Sbjct: 1439 KAINIAGTSQKYFHIDVLVPPTITGASSPNEVSVILNHDTTLECQARGNPF--PAIHWFK 1496

Query: 346  GSEPIDFESEPRF-VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
              +P+ F  +P   +      L + K+   D G+Y C              LT+ +P
Sbjct: 1497 DGKPL-FLGDPNIELLDRGQVLHLKKARRSDKGRYQCTVSNAAGKQAKDIKLTIYIP 1552



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 142/323 (43%), Gaps = 19/323 (5%)

Query: 41   KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQG 100
            +K +AL +  + + C   G P PQ  W K+G+P+  S  I     G+ + I   + SD  
Sbjct: 3357 EKLMALVDTSINIECRATGMPPPQISWLKNGLPLPLSSHIRLLAAGQVIRIVRAQLSDVA 3416

Query: 101  SYTCEVSNGVG-EAKSYSIDLSVLAAPYF--TVEPEFINAAEEETVTFECKASGLPEPEI 157
             YTC  SN  G + K Y  DL VL  P     +  E I   ++ + +  C + G P P +
Sbjct: 3417 VYTCVASNRAGVDNKHY--DLQVLVPPNMDNAMGTEEITVLKDSSTSMTCISDGTPMPSM 3474

Query: 158  HWVHNGKPISQAPPNPRRKVGPNRITIENLRK--SDTGNYGCNATNSLGYVYKDVYVNVL 215
             W+ +   +    P+    +    + ++ ++    D+G Y C A+N  G V K   + VL
Sbjct: 3475 SWLRDSLSLE---PDDHLMIDTQGMVLQLIKAETEDSGRYTCVASNEAGEVSKHFILKVL 3531

Query: 216  AHAPEI--TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGD- 271
               P I  +E P +   +    + LTC   G P P++ W+ + + L    +   L  G+ 
Sbjct: 3532 -EPPHINGSEEPGEISVIVNNPLELTCIASGIPAPKITWMKDGRPLPQTDQVQTLGGGEI 3590

Query: 272  LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRC 329
            L+I+     D+G YTC A +  G       + V    +I  TD+P+ + V   +  T  C
Sbjct: 3591 LQISSAQVEDTGRYTCLASSPAGDDDKEYLVRVHVPPNIAGTDEPQGFSVLRNRQVTLEC 3650

Query: 330  NAVSDPSLKLSIVWLRGSEPIDF 352
               SD      I WL+  E +  
Sbjct: 3651 K--SDAVPPPVITWLKNGERLQL 3671



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 166/452 (36%), Gaps = 91/452 (20%)

Query: 19   VIATGISASQNRHAPKQQYVTRKKEVALRNKKVE------LFCIFGGTPLPQTIWSKDGV 72
             +AT  + + +R    Q +V       L N  V       L C   G P P   W K+G 
Sbjct: 3752 CMATNAAGTDHRRIDLQVHVPPSISPGLTNITVTVNVQTTLACEATGIPKPSIHWRKNGH 3811

Query: 73   PINPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYF 128
             +N     +Q +Y      SL+I      D  +Y C V+N  GE K  +IDL+V   P  
Sbjct: 3812 LLNVDQ--NQNSYRLLSSGSLVIISPSVDDTATYECTVTNDAGEDKR-TIDLTVQVPPSI 3868

Query: 129  TVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPR----RKVGPNRITI 184
              EP      +       C ASG+P P IHW  NG  +      PR    R +    I I
Sbjct: 3869 ADEPTDFLITKHAPAVITCTASGVPFPSIHWTKNGIRLL-----PRGDGYRILSSGAIEI 3923

Query: 185  ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFG 244
               + +  G Y C A NS G V++ V ++V    P I   P +   +    ++L C   G
Sbjct: 3924 FAAQLNHAGRYTCVARNSAGSVHRHVTLHV-QEPPVIQPQPSELDVILNNPILLPCEATG 3982

Query: 245  APKPEVNWIHNQKE---------------------------------------------- 258
             P P + W   QKE                                              
Sbjct: 3983 TPSPFITW---QKEGINVITSVPPVISPHPKEHVVAVDKPLVLPCQADGLPSPDVTWQKD 4039

Query: 259  ----LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
                +   R  +L +G L+I      D+G+YTC A N  G++  S  LTV     I +  
Sbjct: 4040 GRAVVDSVRQRVLSSGSLQIAFAQPQDAGQYTCTAANVAGSSSASTKLTVHVPPRIRNTE 4099

Query: 315  EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPI-----DFESEPRFVQSNDYSLTVT 369
              Y V     A   C  V+D     +I W + +  +      + +EP       Y   V 
Sbjct: 4100 VQYTVNENSQAILPC--VADGIPIPTISWKKDNVLLANLLGKYSAEP-------YGELVL 4150

Query: 370  KSSEL-DSGQYTCRAQTELDFIEAQATLTVQV 400
            ++ EL DSG YTC A           +LTV +
Sbjct: 4151 ENVELEDSGTYTCIANNTAGEDTHSVSLTVHI 4182



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 116/270 (42%), Gaps = 22/270 (8%)

Query: 47   RNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
            + +++ L C   G PLP+  W+ +   I P+   S   + + L+I+ V   D G+Y C  
Sbjct: 4197 KGEQLRLSCKATGIPLPKLTWTFNN-NIIPAHYDSVNGHSE-LVIERVSKEDSGTYVCTA 4254

Query: 107  SNGVGEAKSYSIDLSVLAAPYFT-------VEPEFINAAEEETVTFECKASGLPEPEIHW 159
             N VG  K+    + V   P F        +EP   NA         C+  G P P I W
Sbjct: 4255 ENSVGFVKAIGF-VYVKEPPVFKGDYPSNWIEPLGGNA------ILNCEVKGDPTPTIQW 4307

Query: 160  VHNGKPISQAPPNPR-RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
               G  +     N R R++G   + I      D G+Y C A N  G V + + +  L   
Sbjct: 4308 SRKGAGVEI---NHRIRQLGNGSLAIYGTVNEDAGDYTCIAANEAGIVERSMSLT-LQSP 4363

Query: 219  PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDV 277
            P IT  P +     G ++VL C+  G P P + W    + +    R  +L    L+IT  
Sbjct: 4364 PIITLEPVETVVHAGGSIVLNCQAAGEPHPTITWSRQGQSIPWDDRVKVLSNHSLRITGA 4423

Query: 278  AFADSGEYTCFARNKLGTAQGSGSLTVKEH 307
               D+ +Y C ARN +G+      +TV+ H
Sbjct: 4424 RREDTSDYECVARNLMGSVLVRVPVTVQVH 4453



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/335 (23%), Positives = 128/335 (38%), Gaps = 23/335 (6%)

Query: 91  IKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKAS 150
           I+ V  SD+GSY C   + VG  ++ +    V   P     P  +     E     C   
Sbjct: 486 IEKVTLSDEGSYECVAVSSVGTGQAQTF-FDVSEPPPVIQVPNNVTVTPGERAVLTCLVI 544

Query: 151 GLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDV 210
              +    W  N + +    P   R +    + I  ++ SD G Y C  ++  G     V
Sbjct: 545 SAADYNQTWQRNDRDVRLTEPARIRTLANLSLEIRGVKFSDAGEYHCRVSSEGGSAAASV 604

Query: 211 YVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILET 269
           ++ V    P +T  PK++    G  V + C   G PKP++ W  N   +    RY +   
Sbjct: 605 FLTV-QEPPTVTVMPKNQSFTGGSEVSIMCSATGYPKPKLTWTMNDMFIVASHRYRMTSE 663

Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
           G L I +    D+G Y C A N  G  + +  L   E   +     +  V  G +    C
Sbjct: 664 GTLFIKNAVPKDAGVYGCLASNSAGIDKQTSILRYIEAPKLIVVQSELLVALGDTTVMEC 723

Query: 330 --NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT-VTKSSELDSGQYTCRAQTE 386
             + V  P +K    W +G   ++  S    +      L  + ++ +LD+G YTC A  +
Sbjct: 724 KTSGVPPPQVK----WFKGD--LELRSSTFLIIDPFLGLLKIQETQDLDAGDYTCVAIND 777

Query: 387 LDFIEAQATLTV-----------QVPLEAPSNFTL 410
                 + TL V            + +E  SN TL
Sbjct: 778 AGRATGRITLDVGSHPVFIQEPADISMEIGSNVTL 812


>gi|432858868|ref|XP_004068978.1| PREDICTED: contactin-3-like [Oryzias latipes]
          Length = 1026

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 162/624 (25%), Positives = 260/624 (41%), Gaps = 48/624 (7%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A +   V+L C   G P+P+  W +  GVP  PS ++   N    L I + +  D G+Y 
Sbjct: 243 AAKESMVKLECFALGNPVPEISWRRTSGVPF-PS-KVKMKNSNAVLEIPNFQQDDSGTYE 300

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G+  +    +S  A P++         + EE + +ECKASG P+P   W+ NG
Sbjct: 301 CIAENRRGKNVARG-RISFHAKPHWIQTMTDSALSIEENLFWECKASGKPKPSYSWLKNG 359

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           +   Q     R ++    ++I  L  SD+G Y C A N  G +Y    + VLA AP  ++
Sbjct: 360 E---QVMAEGRVQIENGALSITALNLSDSGMYQCVAENKHGTIYYSAQLMVLASAPHFSK 416

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
            P         G  V L C+   +P     W    + L    R ++   G L+I +V   
Sbjct: 417 TPLKTVLKARLGSEVTLECKPEASPPAISLWKKGNEILQRSERLSLFSNGTLQIANVTKW 476

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+  YTC A+N+ G+A  SG L + E T +T +P + E+  G+S    C   SDP+L ++
Sbjct: 477 DAAIYTCVAKNQFGSASTSGRLIITEPTRLTMRPTNMEIIVGESIVLPCQIASDPALDVT 536

Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W    + IDF  +     R   S    L +        G+Y C   T+++ +   A L
Sbjct: 537 FSWAFNGQLIDFRRDGDHYERVGGSLSGDLMIRNIQLKHGGKYVCVIDTDVESLSTSAIL 596

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKDGE 449
            V+ P   P   T+ ++ D+  A +SW P           GY VQ        W   D  
Sbjct: 597 VVKAPPGPPDKVTVEEITDS-TAQLSWTPGRDNG--SPITGYSVQARTPFTVGWQAMD-- 651

Query: 450 GSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTV 507
            ++ E +  N   +T   ++ +V   +   RV+A N    G PS   +   T + +P T 
Sbjct: 652 -TVPEAVTGNMLTATVVGLNAWV---EYEFRVVARNAVGLGEPSPSSAKTRTEDTIPDTA 707

Query: 508 QSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT 564
            +      G+ S   + W  V  E  NG   GY I ++       G +      IS P  
Sbjct: 708 PTDVGGGGGTKSELVITWEPVPEELQNGDGFGYIIAFR-----PAGAVTWTRAVISTPGV 762

Query: 565 TSAKLAG--LEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEGRGSTPNN 617
           +        + P + + I +  Y   G+G  S          VP   P  V  R  +   
Sbjct: 763 SRYVFRNDTIPPFSPFDIKVGAYNNRGEGPFSTITTVYSAEDVPSVPPKRVWARSLSAAQ 822

Query: 618 LVISWTAMPEIEHNAPHFKYRIFW 641
           + + W A+ ++      ++  ++W
Sbjct: 823 IEVMWEAVSDMPERVLGYEV-VYW 845



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 162/632 (25%), Positives = 253/632 (40%), Gaps = 74/632 (11%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSI-------DLSVLAAPYFTVEPEFIN---A 137
           SL I  VE SD G+YTC V+N +   K+ S        +  V+      +E  F++   A
Sbjct: 184 SLYIAKVEPSDVGNYTCVVNNTITREKALSSPTPLVLRNDGVMGEYEPKIEVHFLDPVPA 243

Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A+E  V  EC A G P PEI W   +G P    P   + K     + I N ++ D+G Y 
Sbjct: 244 AKESMVKLECFALGNPVPEISWRRTSGVPF---PSKVKMKNSNAVLEIPNFQQDDSGTYE 300

Query: 197 CNATNSLGYVYKDVYVNVLA-HA-PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
           C A N  G   K+V    ++ HA P   +   D      + +   C+  G PKP  +W+ 
Sbjct: 301 CIAENRRG---KNVARGRISFHAKPHWIQTMTDSALSIEENLFWECKASGKPKPSYSWLK 357

Query: 255 NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQ 313
           N +++       +E G L IT +  +DSG Y C A NK GT   S  L V     H +  
Sbjct: 358 NGEQVMAEGRVQIENGALSITALNLSDSGMYQCVAENKHGTIYYSAQLMVLASAPHFSKT 417

Query: 314 PEDYEVEA--GQSATFRCN-AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTK 370
           P    ++A  G   T  C    S P++ L   W +G+E +  +   R    ++ +L +  
Sbjct: 418 PLKTVLKARLGSEVTLECKPEASPPAISL---WKKGNEIL--QRSERLSLFSNGTLQIAN 472

Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV----VSWNPV 426
            ++ D+  YTC A+ +         L +  P       T +++I  +  V    ++ +P 
Sbjct: 473 VTKWDAAIYTCVAKNQFGSASTSGRLIITEPTRLTMRPTNMEIIVGESIVLPCQIASDPA 532

Query: 427 SPQSLRGHFRGYKVQTWTEKD----------GEGSIRELIVNKGESTTTEVDKFVPASKN 476
              +    F G  +    + D          G+  IR + +  G      +D  V +   
Sbjct: 533 LDVTFSWAFNGQLIDFRRDGDHYERVGGSLSGDLMIRNIQLKHGGKYVCVIDTDVESLST 592

Query: 477 FARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV-LM 535
                          S I+    P G P  V   E   +  S   L W  P + NG  + 
Sbjct: 593 ---------------SAILVVKAPPGPPDKVTVEE---ITDSTAQLSWT-PGRDNGSPIT 633

Query: 536 GYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG--- 591
           GY +  Q+     VG   ++ +P        +A + GL    +Y   +      G G   
Sbjct: 634 GYSV--QARTPFTVGWQAMDTVPEAVTGNMLTATVVGLNAWVEYEFRVVARNAVGLGEPS 691

Query: 592 ---AESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
              A+++    +P   P +V G G T + LVI+W  +PE   N   F Y I +R      
Sbjct: 692 PSSAKTRTEDTIPDTAPTDVGGGGGTKSELVITWEPVPEELQNGDGFGYIIAFRPAG-AV 750

Query: 649 AWNQDDVLDWRQSELVLANQ--PTFQPYEIKV 678
            W +  +     S  V  N   P F P++IKV
Sbjct: 751 TWTRAVISTPGVSRYVFRNDTIPPFSPFDIKV 782



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 152/644 (23%), Positives = 245/644 (38%), Gaps = 85/644 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +    R+   N   +L I  +  SD G Y C   N  G   
Sbjct: 343 CKASGKPKPSYSWLKNGEQVMAEGRVQIEN--GALSITALNLSDSGMYQCVAENKHGTIY 400

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
            YS  L VLA AP+F+  P    + A     VT ECK    P P I     G  I Q   
Sbjct: 401 -YSAQLMVLASAPHFSKTPLKTVLKARLGSEVTLECKPEASP-PAISLWKKGNEILQR-- 456

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
           + R  +  N  + I N+ K D   Y C A N  G       + ++     +T  P +   
Sbjct: 457 SERLSLFSNGTLQIANVTKWDAAIYTCVAKNQFGSASTSGRL-IITEPTRLTMRPTNMEI 515

Query: 231 VDGKTVVLTCRVFGAPKPEV--NWIHNQK-----------ELTGGRYTILETGDLKITDV 277
           + G+++VL C++   P  +V  +W  N +           E  GG  +    GDL I ++
Sbjct: 516 IVGESIVLPCQIASDPALDVTFSWAFNGQLIDFRRDGDHYERVGGSLS----GDLMIRNI 571

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEH---------THITDQPEDYEVEAGQSATFR 328
                G+Y C     + +   S  L VK             ITD         G+     
Sbjct: 572 QLKHGGKYVCVIDTDVESLSTSAILVVKAPPGPPDKVTVEEITDSTAQLSWTPGRD---N 628

Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
            + ++  S++    +  G + +D  + P  V  N  + TV   +     ++   A+  + 
Sbjct: 629 GSPITGYSVQARTPFTVGWQAMD--TVPEAVTGNMLTATVVGLNAWVEYEFRVVARNAVG 686

Query: 389 FIE-----AQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-- 441
             E     A+      +P  AP++        ++  V++W PV  +   G   GY +   
Sbjct: 687 LGEPSPSSAKTRTEDTIPDTAPTDVGGGGGTKSE-LVITWEPVPEELQNGDGFGYIIAFR 745

Query: 442 -----TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF-ARVLAFNGAYNGPPSEII 495
                TWT        R +I   G S     +  +P    F  +V A+N    GP S I 
Sbjct: 746 PAGAVTWT--------RAVISTPGVSRYVFRNDTIPPFSPFDIKVGAYNNRGEGPFSTIT 797

Query: 496 SFVTPEGVPGTV-QSLEAIPLGSSAFYLKW-VKPEQPNGVLMGYKIKY--QSVKGTKVGP 551
           +  + E VP    + + A  L ++   + W    + P  VL GY++ Y     K   +G 
Sbjct: 798 TVYSAEDVPSVPPKRVWARSLSAAQIEVMWEAVSDMPERVL-GYEVVYWEDDTKPDTIGK 856

Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPD 606
           +     Y      T   + GL+ +T + + +A +  AG G +S  +        P + P 
Sbjct: 857 VRITGNY------TLVNITGLKANTAFYLSVAAFNTAGPGPQSAPINCTTKKPPPDRAPL 910

Query: 607 NVEGR--GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
           N++    GST   L + W  +   E  +    Y +  ++H   E
Sbjct: 911 NIQWTMIGST---LTLHWDPVVATETESKVTGYSVVVKKHRYNE 951



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 99/402 (24%), Positives = 147/402 (36%), Gaps = 53/402 (13%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS-DQGSYTCEV 106
           + +  L C   G+P PQ  WS +G  I+P     +   G SLII +++   D G Y C  
Sbjct: 46  DHQATLTCEAEGSPQPQYRWSLNGTLIDPGHNYRRRVSGGSLIISNLDKDQDSGVYQCTA 105

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLP----EPEIHWV 160
            N  G   S    L       F  +     +N  E + V   C   G P    E    W+
Sbjct: 106 FNTRGSILSRKASLQFAYLDNFKTQMVRSAVNVREGQGVVLLC---GPPPHSGELTFAWI 162

Query: 161 HNGKP--ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS-------------- 202
            N  P  + Q   + RR +      + I  +  SD GNY C   N+              
Sbjct: 163 FNQYPYFVQQ---DSRRFISQETGSLYIAKVEPSDVGNYTCVVNNTITREKALSSPTPLV 219

Query: 203 ------LGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
                 +G     + V+ L   P   E+           V L C   G P PE++W    
Sbjct: 220 LRNDGVMGEYEPKIEVHFLDPVPAAKES----------MVKLECFALGNPVPEISWRRTS 269

Query: 257 KELTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE 315
                 +  +  +   L+I +    DSG Y C A N+ G     G ++     H      
Sbjct: 270 GVPFPSKVKMKNSNAVLEIPNFQQDDSGTYECIAENRRGKNVARGRISFHAKPHWIQTMT 329

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
           D  +   ++  + C A   P  K S  WL+  E +  E     VQ  + +L++T  +  D
Sbjct: 330 DSALSIEENLFWECKASGKP--KPSYSWLKNGEQVMAEGR---VQIENGALSITALNLSD 384

Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAK 417
           SG Y C A+ +   I   A L V       S   L  V+ A+
Sbjct: 385 SGMYQCVAENKHGTIYYSAQLMVLASAPHFSKTPLKTVLKAR 426



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 119/290 (41%), Gaps = 37/290 (12%)

Query: 122 VLAAPYFTVEPE----FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
           +   P +  EP      IN+ + +  T  C+A G P+P+  W  NG  I     N RR+V
Sbjct: 25  IFQGPRWRTEPSDLILSINSPDHQ-ATLTCEAEGSPQPQYRWSLNGTLIDPG-HNYRRRV 82

Query: 178 GPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEAPKDEYTV-DGK 234
               + I NL K  D+G Y C A N+ G +         A+     T+  +    V +G+
Sbjct: 83  SGGSLIISNLDKDQDSGVYQCTAFNTRGSILSRKASLQFAYLDNFKTQMVRSAVNVREGQ 142

Query: 235 TVVLTCRVFGAPKPE-----VNWIHNQK----ELTGGRYTILETGDLKITDVAFADSGEY 285
            VVL C     P P        WI NQ     +    R+   ETG L I  V  +D G Y
Sbjct: 143 GVVLLC----GPPPHSGELTFAWIFNQYPYFVQQDSRRFISQETGSLYIAKVEPSDVGNY 198

Query: 286 TCFARNKLGTAQGSGS---LTVKEHTHITDQPEDYEVE-------AGQSAT-FRCNAVSD 334
           TC   N +   +   S   L ++    + +     EV        A +S     C A+ +
Sbjct: 199 TCVVNNTITREKALSSPTPLVLRNDGVMGEYEPKIEVHFLDPVPAAKESMVKLECFALGN 258

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
           P  ++S  W R S  + F S+ +   SN   L +    + DSG Y C A+
Sbjct: 259 PVPEIS--WRRTSG-VPFPSKVKMKNSNAV-LEIPNFQQDDSGTYECIAE 304


>gi|426334572|ref|XP_004028820.1| PREDICTED: peroxidasin homolog [Gorilla gorilla gorilla]
          Length = 1296

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 194/426 (45%), Gaps = 30/426 (7%)

Query: 51  VELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           V   C   G P P+ IW ++   + +    R++  + G +L+I++ + +DQG Y C   N
Sbjct: 80  VYFTCRAEGNPKPEIIWLRNNNELSMKTDSRLNLLDDG-TLMIQNTQETDQGIYQCMAKN 138

Query: 109 GVGEAKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             GE K+  + L      A P F ++P+       E+VT EC A+G P P I W    + 
Sbjct: 139 VAGEVKTQEVTLRYFGSPARPTFVIQPQNTEVLVGESVTLECSATGHPPPRISWTRGDR- 197

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            +  P +PR  + P+  + I+N+ + D+G Y C+ATN++  V+   ++ V A  P+ T  
Sbjct: 198 -TPLPVDPRVNITPSGGLYIQNVVQEDSGEYACSATNNIDSVHATAFIIVQA-LPQFTVT 255

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSG 283
           P+D   ++G+TV   C   G P P + W     +L+   R+ +L +G L+I+ VA  D G
Sbjct: 256 PQDRVVIEGQTVDFQCEAKGNPPPVIAWTKGGSQLSVDRRHLVLSSGTLRISGVALHDQG 315

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +Y C A N +G+ +    LTV+          P D  VE G +    C++  +P  + +I
Sbjct: 316 QYECQAVNIIGSQKVVAHLTVQPRVTPVFASIPSDTTVEVGANVQLPCSSQGEP--EPAI 373

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV- 400
            W    + +      +F  S +  LT+      D+G+Y C A+  +        L+V V 
Sbjct: 374 TW--NKDGVQVTESGKFHISPEGFLTINDVGPADAGRYECAARNTIGSASVSMVLSVNVP 431

Query: 401 -------PLEAPSNFTLIQVID-----AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
                  P  A S    I  +D      +  +    P SP  L   FR  +     E+  
Sbjct: 432 DVSRNGDPFVATSIVEAIATVDRAINSTRTHLFDSRPRSPNDLLALFRYPRDPYTVEQAR 491

Query: 449 EGSIRE 454
            G I E
Sbjct: 492 AGEIFE 497



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 134/308 (43%), Gaps = 11/308 (3%)

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAA--PYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           Q + TCE    +      +I    L    P  T EP+  +     TV F C+A G P+PE
Sbjct: 34  QAAATCEYPRRIQGRSVATITPEELNCERPRITSEPQDADVTSGNTVYFTCRAEGNPKPE 93

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV-YKDVYVNVL 215
           I W+ N   +S    +    +    + I+N +++D G Y C A N  G V  ++V +   
Sbjct: 94  IIWLRNNNELSMKTDSRLNLLDDGTLMIQNTQETDQGIYQCMAKNVAGEVKTQEVTLRYF 153

Query: 216 AH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGD 271
                P     P++   + G++V L C   G P P ++W    +       R  I  +G 
Sbjct: 154 GSPARPTFVIQPQNTEVLVGESVTLECSATGHPPPRISWTRGDRTPLPVDPRVNITPSGG 213

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
           L I +V   DSGEY C A N + +   +  + V+     T  P+D  V  GQ+  F+C A
Sbjct: 214 LYIQNVVQEDSGEYACSATNNIDSVHATAFIIVQALPQFTVTPQDRVVIEGQTVDFQCEA 273

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
             +P     I W +G   +  +     + S   +L ++  +  D GQY C+A   +   +
Sbjct: 274 KGNP--PPVIAWTKGGSQLSVDRRHLVLSSG--TLRISGVALHDQGQYECQAVNIIGSQK 329

Query: 392 AQATLTVQ 399
             A LTVQ
Sbjct: 330 VVAHLTVQ 337



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 119/264 (45%), Gaps = 11/264 (4%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           L  + V L C   G P P+  W++ D  P+    R++    G  L I++V   D G Y C
Sbjct: 171 LVGESVTLECSATGHPPPRISWTRGDRTPLPVDPRVNITPSG-GLYIQNVVQEDSGEYAC 229

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
             +N +    + +  + V A P FTV P+     E +TV F+C+A G P P I W   G 
Sbjct: 230 SATNNIDSVHATAF-IIVQALPQFTVTPQDRVVIEGQTVDFQCEAKGNPPPVIAWTKGGS 288

Query: 165 PISQAPPNPRRKV--GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA-PEI 221
            +S      RR +      + I  +   D G Y C A N +G      ++ V     P  
Sbjct: 289 QLSVD----RRHLVLSSGTLRISGVALHDQGQYECQAVNIIGSQKVVAHLTVQPRVTPVF 344

Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
              P D     G  V L C   G P+P + W  +  ++T  G++ I   G L I DV  A
Sbjct: 345 ASIPSDTTVEVGANVQLPCSSQGEPEPAITWNKDGVQVTESGKFHISPEGFLTINDVGPA 404

Query: 281 DSGEYTCFARNKLGTAQGSGSLTV 304
           D+G Y C ARN +G+A  S  L+V
Sbjct: 405 DAGRYECAARNTIGSASVSMVLSV 428


>gi|440911308|gb|ELR60993.1| Peroxidasin-like protein, partial [Bos grunniens mutus]
          Length = 1425

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 192/422 (45%), Gaps = 30/422 (7%)

Query: 55  CIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
           C   G P P+ IW ++   + +    R++  + G +L+I++   +DQG Y C   N  GE
Sbjct: 202 CRAEGNPKPEIIWLQNNNELSMKTDSRLNLLDDG-TLMIQNTRETDQGIYQCMAKNVAGE 260

Query: 113 AKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            K+  + L      A P F ++P+       E+VT EC A+G P P+I W    +  S  
Sbjct: 261 VKTQEVTLRYFRSPARPAFVIQPQNTEVLVGESVTLECSATGHPPPQITWTRGDR--SPV 318

Query: 170 PPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
           P +PR  + P+  + I+N+ + D+G Y C A+N++  ++   ++ V A  P+ T  P+D 
Sbjct: 319 PTDPRVSITPSGGLYIQNVEQEDSGEYACFASNTVDSIHATAFIIVQA-LPQFTVTPQDR 377

Query: 229 YTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSGEYTC 287
             ++G+TV   C   G P+P + W     +L+   R+ +L +G L+I  VA  D G+Y C
Sbjct: 378 AVIEGQTVEFHCEAKGYPQPVIAWTKGGSQLSVDRRHLVLSSGTLRILAVALHDQGQYEC 437

Query: 288 FARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLR 345
            A N +G+ + +  LTV+       T  P D  VE G +    C    +P  + ++ W  
Sbjct: 438 QAVNIIGSQRVAAHLTVQPRVTPVFTSVPRDMTVEVGSNVQLPCRPQGEP--EPAVTW-- 493

Query: 346 GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV----- 400
             + +      +F  S +  LT+      D+G+Y C A+  +        L+V V     
Sbjct: 494 NKDGVQVTESGKFHISPEGFLTIRDVGTADAGRYECVARNTIGQASVSMVLSVNVPDVSR 553

Query: 401 ---PLEAPSNFTLIQVID-----AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSI 452
              P  A S    I  +D      +  +    P SP  L   FR  +     E+   G I
Sbjct: 554 NGDPFVATSIVEAIATVDRAINSTRTHLFDSRPRSPNDLLALFRYPRDPYTVEQARAGEI 613

Query: 453 RE 454
            E
Sbjct: 614 FE 615



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/262 (35%), Positives = 121/262 (46%), Gaps = 7/262 (2%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           L  + V L C   G P PQ  W++ D  P+    R+S    G  L I++VE  D G Y C
Sbjct: 289 LVGESVTLECSATGHPPPQITWTRGDRSPVPTDPRVSITPSG-GLYIQNVEQEDSGEYAC 347

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
             SN V    + +  + V A P FTV P+     E +TV F C+A G P+P I W   G 
Sbjct: 348 FASNTVDSIHATAF-IIVQALPQFTVTPQDRAVIEGQTVEFHCEAKGYPQPVIAWTKGGS 406

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA-PEITE 223
            +S    +     G  RI    L   D G Y C A N +G      ++ V     P  T 
Sbjct: 407 QLSVDRRHLVLSSGTLRILAVALH--DQGQYECQAVNIIGSQRVAAHLTVQPRVTPVFTS 464

Query: 224 APKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADS 282
            P+D     G  V L CR  G P+P V W  +  ++T  G++ I   G L I DV  AD+
Sbjct: 465 VPRDMTVEVGSNVQLPCRPQGEPEPAVTWNKDGVQVTESGKFHISPEGFLTIRDVGTADA 524

Query: 283 GEYTCFARNKLGTAQGSGSLTV 304
           G Y C ARN +G A  S  L+V
Sbjct: 525 GRYECVARNTIGQASVSMVLSV 546



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 134/308 (43%), Gaps = 11/308 (3%)

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAA--PYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           Q + TCE    +      +I    L    P  T EP+  +     TV F C+A G P+PE
Sbjct: 152 QAAATCEYPRRIQGRSVATITPEELDCERPRITSEPQDADVTLGNTVFFTCRAEGNPKPE 211

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV-YKDVYVNVL 215
           I W+ N   +S    +    +    + I+N R++D G Y C A N  G V  ++V +   
Sbjct: 212 IIWLQNNNELSMKTDSRLNLLDDGTLMIQNTRETDQGIYQCMAKNVAGEVKTQEVTLRYF 271

Query: 216 AH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGD 271
                P     P++   + G++V L C   G P P++ W    +    T  R +I  +G 
Sbjct: 272 RSPARPAFVIQPQNTEVLVGESVTLECSATGHPPPQITWTRGDRSPVPTDPRVSITPSGG 331

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
           L I +V   DSGEY CFA N + +   +  + V+     T  P+D  V  GQ+  F C A
Sbjct: 332 LYIQNVEQEDSGEYACFASNTVDSIHATAFIIVQALPQFTVTPQDRAVIEGQTVEFHCEA 391

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
              P  +  I W +G   +  +     + S   +L +   +  D GQY C+A   +    
Sbjct: 392 KGYP--QPVIAWTKGGSQLSVDRRHLVLSSG--TLRILAVALHDQGQYECQAVNIIGSQR 447

Query: 392 AQATLTVQ 399
             A LTVQ
Sbjct: 448 VAAHLTVQ 455


>gi|241186228|ref|XP_002400783.1| sdk-P1, putative [Ixodes scapularis]
 gi|215495292|gb|EEC04933.1| sdk-P1, putative [Ixodes scapularis]
          Length = 1754

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 155/565 (27%), Positives = 220/565 (38%), Gaps = 76/565 (13%)

Query: 53  LFCIFGGTPLPQT--IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
           L CI  G+PL +    W K G P+           G    + H       + T  + N +
Sbjct: 243 LECIAAGSPLEEVRVSWLKGGQPLR----------GLPHALTH------WNRTLTLLNRL 286

Query: 111 GEAKSYSIDLSVLAAPYFTVEPEFINAAEEET-------VTFECKASGLPEPEIHWVHNG 163
            E  +Y   L  +A P     P  + A  EET       +   C A G P P + W+ N 
Sbjct: 287 SEGPNYGGSLLWVAVP-----PRLVQAVSEETAAELGQHLQLPCLAEGRPPPAVEWLRNA 341

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           +P+  A       +    + I+ L   D G   C A N LG      +++V    P    
Sbjct: 342 RPLDVAAGGRLHVLSNGSLDIDALSMEDAGVLQCVAHNPLGEARAATWLHVKISPPAFLR 401

Query: 224 APKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFAD 281
            P++   +DG    L C V GAP P  +W +N     L  GR  IL++G L I  V   D
Sbjct: 402 PPENVTVLDGMDAQLPCAVVGAPLPNTSWAYNDLHPVLNEGRTQILDSGTLVIASVVTGD 461

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           SG+Y+C   N  G  Q    LTV   T I   P D  V  G +A  +C    DPS+   +
Sbjct: 462 SGKYSCTRANSAGATQAEAYLTVLVRTQIVKPPVDTRVILGSTAELQCRISHDPSVPYEV 521

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL--DFIEAQATLTVQ 399
            W  G + +   S  R   S D +L + ++   D G YTC   +    D   A+  + V 
Sbjct: 522 CWFFGEQQLGALSRVRL--SPDGTLRIDQARNTDIGTYTCMVTSPGGNDTRSARLEVIVA 579

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
            PLE   N  L+                  ++     GY    W             VN 
Sbjct: 580 APLEGERNGRLLGY----------------AVEYRLAGYPSSPWAG-----------VNV 612

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQS-LEAIPLGSS 518
             +  T  D  V  +    RV AFN    G  SE I   T EGVP    S L A  L S+
Sbjct: 613 TATRATLEDLIVWQTYAL-RVAAFNEKGLGVFSEPIHVRTREGVPQAAPSGLRADALNST 671

Query: 519 AFYLKWVKPEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT------TTSAKL 569
           A  ++W +P  P   NG+  GY+++    +G+ VG        +  P         +A +
Sbjct: 672 AVQVRW-RPPDPQLVNGLNQGYRVEAWP-RGSAVGVGSPEASLVVAPLGGAPLQEHAAVV 729

Query: 570 AGLEPSTKYRIHLAGYTKAGDGAES 594
           AGL     Y + +  +T  G+G  S
Sbjct: 730 AGLRKYHSYNLTVLCFTSPGNGPRS 754



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 159/668 (23%), Positives = 256/668 (38%), Gaps = 64/668 (9%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPIN--PSDRISQGNYGKSLI 90
           P+      ++  A   + ++L C+  G P P   W ++  P++     R+   + G SL 
Sbjct: 303 PRLVQAVSEETAAELGQHLQLPCLAEGRPPPAVEWLRNARPLDVAAGGRLHVLSNG-SLD 361

Query: 91  IKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKAS 150
           I  +   D G   C   N +GEA++ +     ++ P F   PE +   +       C   
Sbjct: 362 IDALSMEDAGVLQCVAHNPLGEARAATWLHVKISPPAFLRPPENVTVLDGMDAQLPCAVV 421

Query: 151 GLPEPEIHWVHNG-KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           G P P   W +N   P+        + +    + I ++   D+G Y C   NS G    +
Sbjct: 422 GAPLPNTSWAYNDLHPVLNE--GRTQILDSGTLVIASVVTGDSGKYSCTRANSAGATQAE 479

Query: 210 VYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKELTG-GRYTI 266
            Y+ VL    +I + P D   + G T  L CR+   P    EV W   +++L    R  +
Sbjct: 480 AYLTVLVRT-QIVKPPVDTRVILGSTAELQCRISHDPSVPYEVCWFFGEQQLGALSRVRL 538

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA---GQ 323
              G L+I      D G YTC   +  G    S  L V     I   P + E      G 
Sbjct: 539 SPDGTLRIDQARNTDIGTYTCMVTSPGGNDTRSARLEV-----IVAAPLEGERNGRLLGY 593

Query: 324 SATFRCNAV-SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCR 382
           +  +R     S P   +++   R +     E     +    Y+L V   +E   G +   
Sbjct: 594 AVEYRLAGYPSSPWAGVNVTATRAT----LED---LIVWQTYALRVAAFNEKGLGVF--- 643

Query: 383 AQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT 442
             +E   +  +      VP  APS       +++    V W P  PQ + G  +GY+V+ 
Sbjct: 644 --SEPIHVRTREG----VPQAAPSGLR-ADALNSTAVQVRWRPPDPQLVNGLNQGYRVEA 696

Query: 443 WTEKD--GEGSIRELIVNK--GESTTTEVDKFVPASKNFAR----VLAFNGAYNGPPSEI 494
           W      G GS    +V    G +   E    V   + +      VL F    NGP S  
Sbjct: 697 WPRGSAVGVGSPEASLVVAPLGGAPLQEHAAVVAGLRKYHSYNLTVLCFTSPGNGPRSAP 756

Query: 495 ISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLE 554
           +   T + VPG V SL+   +   +  + W  PE  NG+L+G +      K         
Sbjct: 757 VLVTTKQDVPGPVGSLKFDDILDVSVKVLWTPPEDTNGILLGREGWSGGGK--------- 807

Query: 555 RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNV 608
                S P   +  ++ L P T+YR+ L      G    S      + +   P   P NV
Sbjct: 808 ----TSAPDARTLSVSPLVPFTEYRLRLLATNVVGPSPPSEPSQWFQTIQAPPAHPPRNV 863

Query: 609 EGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQ 668
             R    + L + WT +P+++       Y + +R  + G+ +    V D   + LVL + 
Sbjct: 864 TVRAVNAHALRVRWTPLPQVDWYGVPRGYNVSFRTSDEGD-FRWTVVEDHNANSLVLDDL 922

Query: 669 PTFQPYEI 676
             F PYE+
Sbjct: 923 QAFTPYEV 930



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 141/337 (41%), Gaps = 48/337 (14%)

Query: 89  LIIKHVEFSDQGSYTCEVSNG------VG-----EAKSYSID------LSVLAAPYFTVE 131
           L+I    F DQG Y  E++N       +G     E +  S++      LS++  P    E
Sbjct: 173 LVILEARFEDQGRYQVELTNPHTGEFLLGPLLELEVEGESVEEDGPHKLSIVVPPS---E 229

Query: 132 PEFINAAEEETVTFECKASGLP--EPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLR 188
            EF N       T EC A+G P  E  + W+  G+P+      P      NR +T+ N R
Sbjct: 230 SEFNNLGNGYDNTLECIAAGSPLEEVRVSWLKGGQPLRGL---PHALTHWNRTLTLLN-R 285

Query: 189 KSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPK 247
            S+  NYG     SL +V         A  P + +A  +E   + G+ + L C   G P 
Sbjct: 286 LSEGPNYG----GSLLWV---------AVPPRLVQAVSEETAAELGQHLQLPCLAEGRPP 332

Query: 248 PEVNWIHNQKEL---TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTV 304
           P V W+ N + L    GGR  +L  G L I  ++  D+G   C A N LG A+ +  L V
Sbjct: 333 PAVEWLRNARPLDVAAGGRLHVLSNGSLDIDALSMEDAGVLQCVAHNPLGEARAATWLHV 392

Query: 305 K-EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSND 363
           K         PE+  V  G  A   C  V  P    S  +     P+  E   + + S  
Sbjct: 393 KISPPAFLRPPENVTVLDGMDAQLPCAVVGAPLPNTSWAY-NDLHPVLNEGRTQILDSG- 450

Query: 364 YSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
            +L +      DSG+Y+C         +A+A LTV V
Sbjct: 451 -TLVIASVVTGDSGKYSCTRANSAGATQAEAYLTVLV 486



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 12/145 (8%)

Query: 399  QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVN 458
            QV L+APS           +  VSW P       G   GYK+    E D E ++  +   
Sbjct: 1309 QVRLDAPS---------PTEVAVSWAPPPEDERNGELLGYKIFYKAEGDAEEAMEAVPAT 1359

Query: 459  KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSS 518
                T T++ +F   ++   ++LAFN A +GP S+ +   T    PG    L+   +  +
Sbjct: 1360 PAAYTLTDLRRF---TRYSVQLLAFNPAGDGPRSQALQVQTLADRPGVPGPLDFSDITMN 1416

Query: 519  AFYLKWVKPEQPNGVLMGYKIKYQS 543
            +  + W  PE+PNGV+ GY + Y++
Sbjct: 1417 SLNVSWSPPEEPNGVITGYLVNYET 1441



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 137/645 (21%), Positives = 235/645 (36%), Gaps = 92/645 (14%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWS-KDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
            L     +L C   G PLP T W+  D  P+    R    + G +L+I  V   D G Y+C
Sbjct: 409  LDGMDAQLPCAVVGAPLPNTSWAYNDLHPVLNEGRTQILDSG-TLVIASVVTGDSGKYSC 467

Query: 105  EVSNGVG--EAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEP--EIHWV 160
              +N  G  +A++Y   L+VL        P         T   +C+ S  P    E+ W 
Sbjct: 468  TRANSAGATQAEAY---LTVLVRTQIVKPPVDTRVILGSTAELQCRISHDPSVPYEVCWF 524

Query: 161  HNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
               + +       R ++ P+  + I+  R +D G Y C  T+  G   +   + V     
Sbjct: 525  FGEQQLGALS---RVRLSPDGTLRIDQARNTDIGTYTCMVTSPGGNDTRSARLEV----- 576

Query: 220  EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT-----ILETGDLKI 274
             I  AP  E   +G+ +        A  P   W      +T  R T     + +T  L++
Sbjct: 577  -IVAAPL-EGERNGRLLGYAVEYRLAGYPSSPWA--GVNVTATRATLEDLIVWQTYALRV 632

Query: 275  TDVAFADSG----EYTCFARNKLGTAQGSGSLTVKEHTHITD-----QPEDYEVEAGQSA 325
               AF + G          R + G  Q + S    +  + T      +P D ++  G + 
Sbjct: 633  --AAFNEKGLGVFSEPIHVRTREGVPQAAPSGLRADALNSTAVQVRWRPPDPQLVNGLNQ 690

Query: 326  TFRCNA--------VSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELD 375
             +R  A        V  P   L +  L G  P+   +       + + Y+LTV   +   
Sbjct: 691  GYRVEAWPRGSAVGVGSPEASLVVAPL-GGAPLQEHAAVVAGLRKYHSYNLTVLCFTSPG 749

Query: 376  SGQYTCRAQTELDFIEAQATLTVQVPLEAP-SNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
            +G  +           A   +T +  +  P  +     ++D    V+ W P  P+   G 
Sbjct: 750  NGPRS-----------APVLVTTKQDVPGPVGSLKFDDILDVSVKVL-WTP--PEDTNGI 795

Query: 435  FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE- 493
              G   + W+   G G       +  ++ T  V   VP ++   R+LA N     PPSE 
Sbjct: 796  LLGR--EGWS---GGGK-----TSAPDARTLSVSPLVPFTEYRLRLLATNVVGPSPPSEP 845

Query: 494  ---IISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPN--GVLMGYKIKYQSVKGTK 548
                 +   P   P    ++ A+   + A  ++W    Q +  GV  GY + +++     
Sbjct: 846  SQWFQTIQAPPAHPPRNVTVRAV--NAHALRVRWTPLPQVDWYGVPRGYNVSFRTSDEGD 903

Query: 549  VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG-----DGAESKYLFYVPFK 603
                  R   + D    S  L  L+  T Y + +  +   G     D ++ +    VP  
Sbjct: 904  F-----RWTVVEDHNANSLVLDDLQAFTPYEVFMQAFNDVGTSGPSDTSKERTREAVPSA 958

Query: 604  NPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
             P  V  + ++   +V++W  +P          YR+ +R     E
Sbjct: 959  GPSQVSAKATSSTTVVVTWGPVPRAHRGGILEGYRVVYRAAKEAE 1003



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 80/201 (39%), Gaps = 10/201 (4%)

Query: 397  TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
            T+Q P   P     ++ ++A    V W P+      G  RGY V   T    EG  R  +
Sbjct: 851  TIQAPPAHPPRNVTVRAVNAHALRVRWTPLPQVDWYGVPRGYNVSFRTSD--EGDFRWTV 908

Query: 457  VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQS-LEAIPL 515
            V    + +  +D     +     + AFN      PS+     T E VP    S + A   
Sbjct: 909  VEDHNANSLVLDDLQAFTPYEVFMQAFNDVGTSGPSDTSKERTREAVPSAGPSQVSAKAT 968

Query: 516  GSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLE 573
             S+   + W  V      G+L GY++ Y++ K  +  P  +   +I    T +  L  L 
Sbjct: 969  SSTTVVVTWGPVPRAHRGGILEGYRVVYRAAK--EAEPTRK---HIESNATFTTTLTELR 1023

Query: 574  PSTKYRIHLAGYTKAGDGAES 594
              T Y + +   T+ GDGA S
Sbjct: 1024 KHTSYTVQVLALTRVGDGALS 1044



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 90/253 (35%), Gaps = 35/253 (13%)

Query: 125 APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI-- 182
           AP F   PE    +  +     C A G P P +  + +G+P++          G  R+  
Sbjct: 22  APRFVKHPEGGYVSLGQRRGLHCDAVGSPAPRLRLLRDGQPLTN-------WTGTTRLLH 74

Query: 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD---GKTVVLT 239
            + ++  S  G Y C A NS G V        +AH    +E      TV    G  VVL 
Sbjct: 75  VLSHVELSHAGLYQCVANNSAGSVLSRTAKLRVAHL-TASEPVSKTVTVQVRRGSPVVLD 133

Query: 240 C-RVFGAPKPEVNWIH------NQKELTGGRYTILETGDLKITDVAFADSGEYTC----- 287
             R    P     W+         + L G +Y   +   L I +  F D G Y       
Sbjct: 134 PPRAESVPAATATWMRLSGDASGSEPLEGIQYATTQDNHLVILEARFEDQGRYQVELTNP 193

Query: 288 ----FARNKLGTAQGSGSLTVKEHTH---ITDQPEDYE---VEAGQSATFRCNAVSDPSL 337
               F    L   +  G    ++  H   I   P + E   +  G   T  C A   P  
Sbjct: 194 HTGEFLLGPLLELEVEGESVEEDGPHKLSIVVPPSESEFNNLGNGYDNTLECIAAGSPLE 253

Query: 338 KLSIVWLRGSEPI 350
           ++ + WL+G +P+
Sbjct: 254 EVRVSWLKGGQPL 266



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 13/152 (8%)

Query: 479  RVLAFNGAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLM 535
            RV+A NG  +GP S  +S    E VP G  + +       +   + W  P  ++ NG L+
Sbjct: 1278 RVVATNGQGDGPTSRPVSVYVGEAVPTGYPRQVRLDAPSPTEVAVSWAPPPEDERNGELL 1337

Query: 536  GYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK 595
            GYKI Y++    +    +E +P     T  +  L  L   T+Y + L  +  AGDG  S+
Sbjct: 1338 GYKIFYKAEGDAEEA--MEAVPA----TPAAYTLTDLRRFTRYSVQLLAFNPAGDGPRSQ 1391

Query: 596  YLFYVPFKNPDNVEG----RGSTPNNLVISWT 623
             L      +   V G       T N+L +SW+
Sbjct: 1392 ALQVQTLADRPGVPGPLDFSDITMNSLNVSWS 1423



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 74/351 (21%), Positives = 124/351 (35%), Gaps = 71/351 (20%)

Query: 401  PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIREL--IVN 458
            PL +PS       + A+   +SW P      R  F   +     + +  G  +EL   ++
Sbjct: 1105 PLVSPSQ------VQARHLTLSWTPG-----RDGFAPLRCYLLQKIEAGGPWKELPQKID 1153

Query: 459  KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII--SFVTPEGVPGTVQSLEAIPLG 516
             G +T T  D   PA++   R+ A N     P SE    ++  P         +   P  
Sbjct: 1154 PGATTYTVAD-LRPATRYLFRLRAVNDLGFSPWSEESNETWTLPAAPEVAPTGVVVTPYT 1212

Query: 517  SSAFYLKW--VKPEQPNGVLM--GYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGL 572
            +++  + W  +  E  NG L    Y+++   V     GP   R   +         L GL
Sbjct: 1213 TTSITVVWKGIAEEAWNGDLAHPSYRVEACPVGA---GPQECRSRSLEGAGGGPLTLEGL 1269

Query: 573  EPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEGRGSTPNNLVISWTAMPE 627
            +    Y + +      GDG  S+ +       VP   P  V     +P  + +SW   PE
Sbjct: 1270 QRDRIYEVRVVATNGQGDGPTSRPVSVYVGEAVPTGYPRQVRLDAPSPTEVAVSWAPPPE 1329

Query: 628  IEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDG 687
             E N     Y+IF++                                         E D 
Sbjct: 1330 DERNGELLGYKIFYK----------------------------------------AEGDA 1349

Query: 688  EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
            E ++  +       T T++ +F   ++   ++LAFN A +GP S+ +   T
Sbjct: 1350 EEAMEAVPATPAAYTLTDLRRF---TRYSVQLLAFNPAGDGPRSQALQVQT 1397


>gi|172044151|sp|A4IGL7.1|PXDN_XENTR RecName: Full=Peroxidasin; Flags: Precursor
 gi|134024022|gb|AAI35156.1| pxdn protein [Xenopus (Silurana) tropicalis]
          Length = 1457

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 173/362 (47%), Gaps = 21/362 (5%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSD--RISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           V   C   G P P+ IW ++   ++  D  R++  N G +L+I++ + +DQG Y C   N
Sbjct: 253 VYFTCRAEGNPKPEIIWLRNNNELSMKDDSRLNLLNDG-TLMIQNTKETDQGIYQCMAKN 311

Query: 109 GVGEAKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             GE K++ + L      A P F ++P+       E+VT EC A+G P P + W    + 
Sbjct: 312 VAGEVKTHEVTLRYYGTPATPTFVIQPQNTEVLVGESVTLECSATGQPHPRVTWTRGDR- 370

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            +  P +PR  + P+  + I+N+ + D G Y C ATNS+  ++   Y+ V A  P+ T  
Sbjct: 371 -TPLPSDPRINITPSGGLYIQNVNQDDAGEYTCFATNSVETIHSTAYIIVQA-VPQFTVV 428

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSG 283
           P+D    +G TV   C   G PKP + W     +L+   R+ +L +G L+I  VA  D G
Sbjct: 429 PQDRNVFEGHTVDFHCEAQGNPKPVIAWTKGGNQLSVDRRHQVLSSGTLRILRVALHDQG 488

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTHIT----DQPEDYEVEAGQSATFRCNAVSDPSLKL 339
           +Y C A N +G+   +  L V+  T +T      P D  VE G      C++  DP L +
Sbjct: 489 QYECQAVNIVGSKSTAAQLIVQ--TRVTPVFATVPNDMTVEVGTDVQIPCSSQGDP-LPI 545

Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            I W    + I      +F  S    L +  +   D G+Y C A+  + +      L+V 
Sbjct: 546 -ITW--NKDGIQVTESGKFHISPHGYLAIRDAGLADQGRYECVARNPIGYSSVSMVLSVL 602

Query: 400 VP 401
           VP
Sbjct: 603 VP 604



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 136/309 (44%), Gaps = 13/309 (4%)

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAA--PYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           Q + TCE    +      +I  S L    P  T EP+ ++     TV F C+A G P+PE
Sbjct: 207 QAAATCEYPRRLQGRSVSTITPSELNCERPRITSEPQDVDVTFGNTVYFTCRAEGNPKPE 266

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
           I W+ N   +S    +    +    + I+N +++D G Y C A N  G V K   V +  
Sbjct: 267 IIWLRNNNELSMKDDSRLNLLNDGTLMIQNTKETDQGIYQCMAKNVAGEV-KTHEVTLRY 325

Query: 217 HA----PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETG 270
           +     P     P++   + G++V L C   G P P V W    +    +  R  I  +G
Sbjct: 326 YGTPATPTFVIQPQNTEVLVGESVTLECSATGQPHPRVTWTRGDRTPLPSDPRINITPSG 385

Query: 271 DLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN 330
            L I +V   D+GEYTCFA N + T   +  + V+     T  P+D  V  G +  F C 
Sbjct: 386 GLYIQNVNQDDAGEYTCFATNSVETIHSTAYIIVQAVPQFTVVPQDRNVFEGHTVDFHCE 445

Query: 331 AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
           A  +P  K  I W +G   +  +   + + S   +L + + +  D GQY C+A   +   
Sbjct: 446 AQGNP--KPVIAWTKGGNQLSVDRRHQVLSSG--TLRILRVALHDQGQYECQAVNIVGSK 501

Query: 391 EAQATLTVQ 399
              A L VQ
Sbjct: 502 STAAQLIVQ 510



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 117/265 (44%), Gaps = 11/265 (4%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
            L  + V L C   G P P+  W++ D  P+    RI+    G  L I++V   D G YT
Sbjct: 343 VLVGESVTLECSATGQPHPRVTWTRGDRTPLPSDPRINITPSG-GLYIQNVNQDDAGEYT 401

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C  +N V    S +  + V A P FTV P+  N  E  TV F C+A G P+P I W   G
Sbjct: 402 CFATNSVETIHSTAY-IIVQAVPQFTVVPQDRNVFEGHTVDFHCEAQGNPKPVIAWTKGG 460

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKS--DTGNYGCNATNSLGYVYKDVYVNVLAHA-PE 220
             +S      RR    +  T+  LR +  D G Y C A N +G       + V     P 
Sbjct: 461 NQLSVD----RRHQVLSSGTLRILRVALHDQGQYECQAVNIVGSKSTAAQLIVQTRVTPV 516

Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
               P D     G  V + C   G P P + W  +  ++T  G++ I   G L I D   
Sbjct: 517 FATVPNDMTVEVGTDVQIPCSSQGDPLPIITWNKDGIQVTESGKFHISPHGYLAIRDAGL 576

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTV 304
           AD G Y C ARN +G +  S  L+V
Sbjct: 577 ADQGRYECVARNPIGYSSVSMVLSV 601


>gi|410266018|gb|JAA20975.1| peroxidasin homolog [Pan troglodytes]
 gi|410266020|gb|JAA20976.1| peroxidasin homolog [Pan troglodytes]
 gi|410266022|gb|JAA20977.1| peroxidasin homolog [Pan troglodytes]
 gi|410266024|gb|JAA20978.1| peroxidasin homolog [Pan troglodytes]
 gi|410351085|gb|JAA42146.1| peroxidasin homolog [Pan troglodytes]
 gi|410351087|gb|JAA42147.1| peroxidasin homolog [Pan troglodytes]
 gi|410351089|gb|JAA42148.1| peroxidasin homolog [Pan troglodytes]
 gi|410351091|gb|JAA42149.1| peroxidasin homolog [Pan troglodytes]
          Length = 1479

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 194/426 (45%), Gaps = 30/426 (7%)

Query: 51  VELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           V   C   G P P+ IW ++   + +    R++  + G +L+I++ + +DQG Y C   N
Sbjct: 263 VYFTCRAEGNPKPEIIWLRNNNELSMKTDSRLNLLDDG-TLMIQNTQETDQGIYQCMAKN 321

Query: 109 GVGEAKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             GE K+  + L      A P F ++P+       E+VT EC A+G P P I W    + 
Sbjct: 322 VAGEVKTQEVTLRYFGSPARPTFVIQPQNTEVLVGESVTLECSATGHPPPRISWTRGDR- 380

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            +  P +PR  + P+  + I+N+ + D+G Y C+ATN++  V+   ++ V A  P+ T  
Sbjct: 381 -TPLPVDPRVNITPSGGLYIQNVVQEDSGEYACSATNNIDSVHATAFIIVQA-LPQFTVT 438

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSG 283
           P+D   ++G+TV   C   G P P + W     +L+   R+ +L +G L+I+ VA  D G
Sbjct: 439 PQDRVVIEGQTVDFQCEAKGNPPPVIAWTKGGSQLSVDRRHLVLSSGTLRISGVALHDQG 498

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +Y C A N +G+ +    LTV+          P D  VE G +    C++  +P  + +I
Sbjct: 499 QYECQAVNIIGSQKVVAHLTVQPRVTPVFASIPSDTTVEVGANVQLPCSSQGEP--EPAI 556

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV- 400
            W    + +      +F  S +  LT+      D+G+Y C A+  +        L+V V 
Sbjct: 557 TW--NKDGVQVTESGKFHISPEGFLTINDVGPADAGRYECVARNTIGSASVSMVLSVNVP 614

Query: 401 -------PLEAPSNFTLIQVID-----AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
                  P  A S    I  +D      +  +    P SP  L   FR  +     E+  
Sbjct: 615 DVSRNGDPFVATSIVEAIATVDRAINSTRTHLFDSRPRSPNDLLALFRYPRDPYTVEQAR 674

Query: 449 EGSIRE 454
            G I E
Sbjct: 675 AGEIFE 680



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 134/308 (43%), Gaps = 11/308 (3%)

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAA--PYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           Q + TCE    +      +I    L    P  T EP+  +     TV F C+A G P+PE
Sbjct: 217 QAAATCEYPRRIQGRSVATITPEELNCERPRITSEPQDADVTSGNTVYFTCRAEGNPKPE 276

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV-YKDVYVNVL 215
           I W+ N   +S    +    +    + I+N +++D G Y C A N  G V  ++V +   
Sbjct: 277 IIWLRNNNELSMKTDSRLNLLDDGTLMIQNTQETDQGIYQCMAKNVAGEVKTQEVTLRYF 336

Query: 216 AH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGD 271
                P     P++   + G++V L C   G P P ++W    +       R  I  +G 
Sbjct: 337 GSPARPTFVIQPQNTEVLVGESVTLECSATGHPPPRISWTRGDRTPLPVDPRVNITPSGG 396

Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
           L I +V   DSGEY C A N + +   +  + V+     T  P+D  V  GQ+  F+C A
Sbjct: 397 LYIQNVVQEDSGEYACSATNNIDSVHATAFIIVQALPQFTVTPQDRVVIEGQTVDFQCEA 456

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
             +P     I W +G   +  +     + S   +L ++  +  D GQY C+A   +   +
Sbjct: 457 KGNP--PPVIAWTKGGSQLSVDRRHLVLSSG--TLRISGVALHDQGQYECQAVNIIGSQK 512

Query: 392 AQATLTVQ 399
             A LTVQ
Sbjct: 513 VVAHLTVQ 520


>gi|149058424|gb|EDM09581.1| hemicentin 1 (predicted) [Rattus norvegicus]
          Length = 2742

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 192/408 (47%), Gaps = 18/408 (4%)

Query: 21   ATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI-NPSDR 79
            ++ +S +   H P +   T        N +V L C+  G P P   W +D V + N   +
Sbjct: 1396 SSSMSTTLTVHVPPRIQSTEVHYTVNENSQVVLPCVADGIPTPAIHWERDSVLLANLLGK 1455

Query: 80   ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAE 139
             +   YG+ L++++V   D G+YTC  +N  GE  ++++ L+V A P FT  P  ++  +
Sbjct: 1456 YTAQPYGE-LVLENVVLEDAGTYTCVANNAAGE-DTHTVTLTVHALPTFTELPGDLSLNK 1513

Query: 140  EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA 199
             E +   CKA G+P P++ W  N   I   P +     G + + IE + K D+G Y C A
Sbjct: 1514 GEQLRLSCKAVGIPLPKLTWTFNNNII---PAHFDSVNGHSELVIEKVSKEDSGTYVCTA 1570

Query: 200  TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL 259
             NS+G+V    +V V        + P +     G   +L C V G P P + W     ++
Sbjct: 1571 ENSVGFVKAIGFVYVKEPPVFKGDYPSNWIEPLGGNAILNCEVKGDPAPTIQWSRKGADV 1630

Query: 260  -TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYE 318
                R   L  G L I      D+G+YTC A N+ G  + S SLT++    IT +P +  
Sbjct: 1631 EISHRIRQLGNGSLAIYGTVNEDAGDYTCVAANEAGVVERSMSLTLQSSPMITLEPVETI 1690

Query: 319  VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQ 378
            V+AG   T  C A  +P  + +I W R   PI +++  R     + SL +  + + D+ +
Sbjct: 1691 VDAGGRVTLDCQAAGEP--QPTITWSRQGRPIPWDN--RLTMLPNSSLYIAAARKEDTSE 1746

Query: 379  YTCRAQTELDFIEAQATLTVQV-PLEAPSN------FTLIQVIDAKKA 419
            Y C A+  +  +  +  + VQV P+E  S        TL+Q ++   A
Sbjct: 1747 YECVARNLMGSVLVRVPVIVQVSPVEKASKRGAGYATTLLQPMEGGHA 1794



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 165/383 (43%), Gaps = 25/383 (6%)

Query: 48  NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
           N  + L C     P P   W KDG P+  SDR+     G+ L I   +  D G YTC   
Sbjct: 16  NNPISLHCETNAAPPPTLTWYKDGRPLTSSDRVLILPGGRVLQIPRAKVEDAGRYTCVAV 75

Query: 108 NGVGEAKSYSIDLSVLAAPYF----TVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           N  GE  S   D+ VL  P      +  PE +     ++   EC +SG P P   W  +G
Sbjct: 76  NEAGE-DSLQYDIHVLLPPVIKGANSDLPEEVTVLVNKSAQMECSSSGSPAPRNFWQKDG 134

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           +P+ +   +     G   + I N + +DTG Y C A N+ G   K  Y N+  H P    
Sbjct: 135 QPLLEDEHHKFLSDG-RVLQILNAQITDTGRYVCVAENTAGSAKK--YFNLNVHVPPSVI 191

Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD--LKITDVAF 279
            P  E+   V    + LTC V G P P++NW+ N++ +      ++  G   L+I     
Sbjct: 192 GPNHEHLSVVVNHFISLTCEVSGFPPPDLNWLKNEQPIKPNTNVLIVPGGRTLQIIRAKV 251

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED----YEVEAGQSATFRC--NAVS 333
           +D GEYTC A N+ G ++   SLTV     I D   +      V  G S +  C  NAV 
Sbjct: 252 SDGGEYTCVAINQAGESKKKVSLTVHVPPSIKDHGSESLSIVNVREGTSVSLECESNAVP 311

Query: 334 DPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393
            P     I W +    I  +S    + +    L + ++   D+GQY CRA       +  
Sbjct: 312 PP----VITWSKNGRMIP-DSSNVAILTGGQMLHIRRAEVADTGQYVCRAINVAGRDDKN 366

Query: 394 ATLTVQVP--LEAPSNFTLIQVI 414
             L V VP  +E P    +++ +
Sbjct: 367 FHLNVYVPPTIEGPETEVIVETM 389



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 173/414 (41%), Gaps = 39/414 (9%)

Query: 16   LLNVIATGISASQNRHAPKQQYVTRK------KEVALR------------------NKKV 51
            +L+  A  ISA+Q  HA +   + R       + V LR                  N  +
Sbjct: 1186 ILSSGAIEISAAQLNHAGRYTCIARNAAGSVHRHVTLRVQEPPFIQPQPSELDVILNNPI 1245

Query: 52   ELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVG 111
             L C   G P P   W K+G+ +  S +        SL I      D G+Y C   N  G
Sbjct: 1246 LLPCEATGIPTPFITWQKEGINVITSGKSLAVLPSGSLQISRAVQGDAGTYMCVAQNPAG 1305

Query: 112  EAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
             A    I L+V   P  +   +      ++ V+  C+  G P P+I W  +G  ++++  
Sbjct: 1306 TALG-KIKLNVQVPPAISSHQKEYVVTMDKPVSLLCETEGSPPPDITWHKDGHALTES-- 1362

Query: 172  NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
              +R +    + I   +  D G Y C A N  G       + V  H P   ++ +  YTV
Sbjct: 1363 IRQRILNSGALQIAFAQPDDAGQYTCMAANMAGSSSMSTTLTV--HVPPRIQSTEVHYTV 1420

Query: 232  DGKT-VVLTCRVFGAPKPEVNWIHNQKELTG--GRYTILETGDLKITDVAFADSGEYTCF 288
            +  + VVL C   G P P ++W  +   L    G+YT    G+L + +V   D+G YTC 
Sbjct: 1421 NENSQVVLPCVADGIPTPAIHWERDSVLLANLLGKYTAQPYGELVLENVVLEDAGTYTCV 1480

Query: 289  ARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
            A N  G    + +LTV      T+ P D  +  G+     C AV  P  KL+  +     
Sbjct: 1481 ANNAAGEDTHTVTLTVHALPTFTELPGDLSLNKGEQLRLSCKAVGIPLPKLTWTFNNNII 1540

Query: 349  PIDFESEPRFVQSNDYS-LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            P  F+S       N +S L + K S+ DSG Y C A+  + F++A   + V+ P
Sbjct: 1541 PAHFDS------VNGHSELVIEKVSKEDSGTYVCTAENSVGFVKAIGFVYVKEP 1588



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 155/385 (40%), Gaps = 50/385 (12%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLII---KHVE-------------- 95
            L C   G P P   W KDG  +N     +  ++ +SL I   KH+E              
Sbjct: 1038 LACEATGIPKPSINWRKDGHLLNVDQNQNSYSFSQSLTISTAKHMETEILVFGLSSRLLS 1097

Query: 96   ----------FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTF 145
                        D  SY C V++  GE K  ++DL+V   P    EP       +     
Sbjct: 1098 SGSLIIISPSVDDTASYECTVTSDAGEDKR-TVDLTVQVPPTIADEPMDFLVTRQAPAVM 1156

Query: 146  ECKASGLPEPEIHWVHNGKPISQAPPNPR----RKVGPNRITIENLRKSDTGNYGCNATN 201
             C ASG+P P IHW  NG  +      PR    R +    I I   + +  G Y C A N
Sbjct: 1157 TCSASGVPLPSIHWTKNGIRLL-----PRGDGYRILSSGAIEISAAQLNHAGRYTCIARN 1211

Query: 202  SLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--- 258
            + G V++ V + V    P I   P +   +    ++L C   G P P + W   QKE   
Sbjct: 1212 AAGSVHRHVTLRV-QEPPFIQPQPSELDVILNNPILLPCEATGIPTPFITW---QKEGIN 1267

Query: 259  -LTGGR-YTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
             +T G+   +L +G L+I+     D+G Y C A+N  GTA G   L V+    I+   ++
Sbjct: 1268 VITSGKSLAVLPSGSLQISRAVQGDAGTYMCVAQNPAGTALGKIKLNVQVPPAISSHQKE 1327

Query: 317  YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
            Y V   +  +  C     P     I W +    +      R + S   +L +  +   D+
Sbjct: 1328 YVVTMDKPVSLLCETEGSP--PPDITWHKDGHALTESIRQRILNSG--ALQIAFAQPDDA 1383

Query: 377  GQYTCRAQTELDFIEAQATLTVQVP 401
            GQYTC A           TLTV VP
Sbjct: 1384 GQYTCMAANMAGSSSMSTTLTVHVP 1408



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 114/251 (45%), Gaps = 5/251 (1%)

Query: 48   NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            N  +EL CI  G P P+  W KDG P   ++++     G  L +   +  D G YTC  S
Sbjct: 767  NNPLELSCIASGIPAPKISWMKDGRPFLQTEQVQTLEGGAILRVSSAQVEDTGRYTCLAS 826

Query: 108  NGVG-EAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPI 166
            +  G + K Y + + V        E +         VT ECK+  +P P I W+ NG+ +
Sbjct: 827  SPAGDDDKEYLVRVHVPPNIAGVDEAQDFTVLRNRQVTLECKSDAVPPPVIMWLKNGEQL 886

Query: 167  SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
             QA P  R   G   + I N    DT NY C A+N  G   ++  + V    P I+  P+
Sbjct: 887  -QATPRVRILSGGRYLQINNADLGDTANYTCVASNIAGKTTREFILTVNV-PPSISGGPQ 944

Query: 227  DEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL--TGGRYTILETGDLKITDVAFADSGE 284
               T+  K++ L C   G P P + W  +   L  +  RY+ILE G L I      D+G 
Sbjct: 945  SLVTLLNKSIALECLAEGVPSPRITWRKDGVVLAESHARYSILENGFLHIQSAHITDTGR 1004

Query: 285  YTCFARNKLGT 295
            Y C A N  GT
Sbjct: 1005 YLCMATNVAGT 1015



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 169/383 (44%), Gaps = 22/383 (5%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPI--NPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           L  + VEL C   G P+P+  W +DG PI    ++R+     G +L I     SD G YT
Sbjct: 483 LLGENVELVCDADGIPIPRLQWLRDGKPIVSGETERVRVTTDGSTLNIYRALTSDMGKYT 542

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKASGLPEPEIHWV 160
           C  +N  GE      +L+V   P       E E + A  + ++  ECKA+G P P+I W+
Sbjct: 543 CVATNPAGEEDRI-FNLNVYVPPKIRGNKEEAEKLMALVDTSLNIECKATGTPPPQISWL 601

Query: 161 HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
            NG P+  +  + R       I I   + SD   Y C A+N  G   K   + V    P 
Sbjct: 602 KNGLPLPIS-SHIRLLSAGQAIRIVRAQVSDVAVYTCVASNRAGIDSKRYSLQVFV-PPN 659

Query: 221 ITEAPKDE--YTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD--LKITD 276
           +  A   E    V G +  +TC   GAP P ++W+ + + L    +  + T    L++  
Sbjct: 660 MDNAMGTEEITLVKGSSTSMTCFTDGAPTPSMSWLRDGQPLALDAHLTIGTQGMVLQLIK 719

Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSD 334
               D+G+YTC A N+ G       L V E  HI  ++ P +  V         C A   
Sbjct: 720 ADTEDTGKYTCVASNEAGEVSKHFVLKVLEPPHINGSEGPGEVSVIVNNPLELSCIASGI 779

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
           P+ K+S  W++   P   ++E          L V+ +   D+G+YTC A +     + + 
Sbjct: 780 PAPKIS--WMKDGRPF-LQTEQVQTLEGGAILRVSSAQVEDTGRYTCLASSPAGDDDKEY 836

Query: 395 TLTVQVP-----LEAPSNFTLIQ 412
            + V VP     ++   +FT+++
Sbjct: 837 LVRVHVPPNIAGVDEAQDFTVLR 859



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 166/370 (44%), Gaps = 16/370 (4%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQG 100
           +K +AL +  + + C   GTP PQ  W K+G+P+  S  I   + G+++ I   + SD  
Sbjct: 574 EKLMALVDTSLNIECKATGTPPPQISWLKNGLPLPISSHIRLLSAGQAIRIVRAQVSDVA 633

Query: 101 SYTCEVSNGVG-EAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHW 159
            YTC  SN  G ++K YS+ + V       +  E I   +  + +  C   G P P + W
Sbjct: 634 VYTCVASNRAGIDSKRYSLQVFVPPNMDNAMGTEEITLVKGSSTSMTCFTDGAPTPSMSW 693

Query: 160 VHNGKPISQAPPNPRRKVGPNRITIENLRKS--DTGNYGCNATNSLGYVYKDVYVNVLAH 217
           + +G+P++    +    +G   + ++ ++    DTG Y C A+N  G V K   + VL  
Sbjct: 694 LRDGQPLAL---DAHLTIGTQGMVLQLIKADTEDTGKYTCVASNEAGEVSKHFVLKVL-E 749

Query: 218 APEI--TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE-LTGGRYTILETGD-LK 273
            P I  +E P +   +    + L+C   G P P+++W+ + +  L   +   LE G  L+
Sbjct: 750 PPHINGSEGPGEVSVIVNNPLELSCIASGIPAPKISWMKDGRPFLQTEQVQTLEGGAILR 809

Query: 274 ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNA 331
           ++     D+G YTC A +  G       + V    +I   D+ +D+ V   +  T  C  
Sbjct: 810 VSSAQVEDTGRYTCLASSPAGDDDKEYLVRVHVPPNIAGVDEAQDFTVLRNRQVTLECK- 868

Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
            SD      I+WL+  E +      R +    Y L +  +   D+  YTC A        
Sbjct: 869 -SDAVPPPVIMWLKNGEQLQATPRVRILSGGRY-LQINNADLGDTANYTCVASNIAGKTT 926

Query: 392 AQATLTVQVP 401
            +  LTV VP
Sbjct: 927 REFILTVNVP 936



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 165/384 (42%), Gaps = 27/384 (7%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L NK  ++ C   G+P P+  W KDG P+   +     + G+ L I + + +D G Y C 
Sbjct: 109 LVNKSAQMECSSSGSPAPRNFWQKDGQPLLEDEHHKFLSDGRVLQILNAQITDTGRYVCV 168

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNG 163
             N  G AK Y  +L+V   P   + P  E ++      ++  C+ SG P P+++W+ N 
Sbjct: 169 AENTAGSAKKY-FNLNVHVPPSV-IGPNHEHLSVVVNHFISLTCEVSGFPPPDLNWLKNE 226

Query: 164 KPISQAPPNPRRKVGPNRITIENLRK--SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
           +PI    PN    + P   T++ +R   SD G Y C A N  G   K V + V    P I
Sbjct: 227 QPIK---PNTNVLIVPGGRTLQIIRAKVSDGGEYTCVAINQAGESKKKVSLTVHV-PPSI 282

Query: 222 TEAPKDEYTV----DGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD--LKIT 275
            +   +  ++    +G +V L C     P P + W  N + +       + TG   L I 
Sbjct: 283 KDHGSESLSIVNVREGTSVSLECESNAVPPPVITWSKNGRMIPDSSNVAILTGGQMLHIR 342

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA-GQSATFRCNAVSD 334
               AD+G+Y C A N  G    +  L V     I     +  VE      T  C+A   
Sbjct: 343 RAEVADTGQYVCRAINVAGRDDKNFHLNVYVPPTIEGPETEVIVETMSNPVTLTCDATGI 402

Query: 335 PSLKLSIVWLRGSEPIDFESEP--RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
           P    +I WL+  +PI+  S+P    + S    L + +    + G YTC A       + 
Sbjct: 403 P--PPTITWLKNHKPIE-NSDPLEAHILSGGSKLQIARLQRSNRGNYTCVASNMEGKAQK 459

Query: 393 QATLTVQVP-----LEAPSNFTLI 411
              L++QVP      E PS  +++
Sbjct: 460 NYILSIQVPPSVAGAEVPSEVSVL 483



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 161/364 (44%), Gaps = 19/364 (5%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFSDQGSYTCEVSN 108
           V L C   G P P   W K+  PI  SD +     + G  L I  ++ S++G+YTC  SN
Sbjct: 393 VTLTCDATGIPPPTITWLKNHKPIENSDPLEAHILSGGSKLQIARLQRSNRGNYTCVASN 452

Query: 109 GVGEA-KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPIS 167
             G+A K+Y + + V  +      P  ++    E V   C A G+P P + W+ +GKPI 
Sbjct: 453 MEGKAQKNYILSIQVPPSVAGAEVPSEVSVLLGENVELVCDADGIPIPRLQWLRDGKPIV 512

Query: 168 QAPPNPRRKVGPNRITIENLRK--SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT--- 222
                 R +V  +  T+   R   SD G Y C ATN  G   +   +NV    P+I    
Sbjct: 513 SG-ETERVRVTTDGSTLNIYRALTSDMGKYTCVATNPAGEEDRIFNLNVYV-PPKIRGNK 570

Query: 223 -EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGD-LKITDVAF 279
            EA K    VD  ++ + C+  G P P+++W+ N   L       +L  G  ++I     
Sbjct: 571 EEAEKLMALVD-TSLNIECKATGTPPPQISWLKNGLPLPISSHIRLLSAGQAIRIVRAQV 629

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ--PEDYEVEAGQSATFRCNAVSDPSL 337
           +D   YTC A N+ G      SL V    ++ +    E+  +  G S +  C     P+ 
Sbjct: 630 SDVAVYTCVASNRAGIDSKRYSLQVFVPPNMDNAMGTEEITLVKGSSTSMTCFTDGAPTP 689

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
            +S  WLR  +P+  ++    + +    L + K+   D+G+YTC A  E   +     L 
Sbjct: 690 SMS--WLRDGQPLALDAH-LTIGTQGMVLQLIKADTEDTGKYTCVASNEAGEVSKHFVLK 746

Query: 398 VQVP 401
           V  P
Sbjct: 747 VLEP 750



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 172/452 (38%), Gaps = 62/452 (13%)

Query: 44   VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
            V L NK + L C+  G P P+  W KDGV +  S           L I+    +D G Y 
Sbjct: 947  VTLLNKSIALECLAEGVPSPRITWRKDGVVLAESHARYSILENGFLHIQSAHITDTGRYL 1006

Query: 104  CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
            C  +N  G       DL     P     P  +        T  C+A+G+P+P I+W  +G
Sbjct: 1007 CMATNVAG------TDL----PPSIAAGPTNVTVTVNVQTTLACEATGIPKPSINWRKDG 1056

Query: 164  KPISQAPPNPRRKVGPNRITIENLRK---------------------------SDTGNYG 196
              +     N         +TI   +                             DT +Y 
Sbjct: 1057 H-LLNVDQNQNSYSFSQSLTISTAKHMETEILVFGLSSRLLSSGSLIIISPSVDDTASYE 1115

Query: 197  CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
            C  T+  G   + V + V    P I + P D         V+TC   G P P ++W  N 
Sbjct: 1116 CTVTSDAGEDKRTVDLTVQV-PPTIADEPMDFLVTRQAPAVMTCSASGVPLPSIHWTKNG 1174

Query: 257  KELT--GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP 314
              L   G  Y IL +G ++I+      +G YTC ARN  G+     +L V+E   I  QP
Sbjct: 1175 IRLLPRGDGYRILSSGAIEISAAQLNHAGRYTCIARNAAGSVHRHVTLRVQEPPFIQPQP 1234

Query: 315  EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPID-FESEPRFVQSNDYSLTVTKSSE 373
             + +V         C A   P+    I W +  E I+   S          SL ++++ +
Sbjct: 1235 SELDVILNNPILLPCEATGIPT--PFITWQK--EGINVITSGKSLAVLPSGSLQISRAVQ 1290

Query: 374  LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRG 433
             D+G Y C AQ        +  L VQVP    S+         K+ VV+ +   P SL  
Sbjct: 1291 GDAGTYMCVAQNPAGTALGKIKLNVQVPPAISSH--------QKEYVVTMD--KPVSLLC 1340

Query: 434  HFRGYKVQ--TWTEKDGEG---SIRELIVNKG 460
               G      TW  KDG     SIR+ I+N G
Sbjct: 1341 ETEGSPPPDITW-HKDGHALTESIRQRILNSG 1371



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 153/381 (40%), Gaps = 36/381 (9%)

Query: 47   RNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
            R     + C   G PLP   W+K+G+ + P     +     ++ I   + +  G YTC  
Sbjct: 1150 RQAPAVMTCSASGVPLPSIHWTKNGIRLLPRGDGYRILSSGAIEISAAQLNHAGRYTCIA 1209

Query: 107  SNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHW------- 159
             N  G    + + L V   P+   +P  ++      +   C+A+G+P P I W       
Sbjct: 1210 RNAAGSVHRH-VTLRVQEPPFIQPQPSELDVILNNPILLPCEATGIPTPFITWQKEGINV 1268

Query: 160  VHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
            + +GK ++  P           + I    + D G Y C A N  G     + +NV    P
Sbjct: 1269 ITSGKSLAVLP--------SGSLQISRAVQGDAGTYMCVAQNPAGTALGKIKLNVQV-PP 1319

Query: 220  EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVA 278
             I+   K+      K V L C   G+P P++ W  +   LT   R  IL +G L+I    
Sbjct: 1320 AISSHQKEYVVTMDKPVSLLCETEGSPPPDITWHKDGHALTESIRQRILNSGALQIAFAQ 1379

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
              D+G+YTC A N  G++  S +LTV     I      Y V         C  V+D    
Sbjct: 1380 PDDAGQYTCMAANMAGSSSMSTTLTVHVPPRIQSTEVHYTVNENSQVVLPC--VADGIPT 1437

Query: 339  LSIVWLRGSEPI-----DFESEPRFVQSNDYSLTVTKSSEL-DSGQYTCRAQTELDFIEA 392
             +I W R S  +      + ++P       Y   V ++  L D+G YTC A         
Sbjct: 1438 PAIHWERDSVLLANLLGKYTAQP-------YGELVLENVVLEDAGTYTCVANNAAGEDTH 1490

Query: 393  QATLTVQ-VP--LEAPSNFTL 410
              TLTV  +P   E P + +L
Sbjct: 1491 TVTLTVHALPTFTELPGDLSL 1511


>gi|301758856|ref|XP_002915289.1| PREDICTED: LOW QUALITY PROTEIN: hemicentin-1-like [Ailuropoda
            melanoleuca]
          Length = 5103

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 166/350 (47%), Gaps = 13/350 (3%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
            L C   G+P P   W KDG P++ ++          L++K++E  D G+YTC   N VG 
Sbjct: 4097 LPCSASGSPEPSIAWEKDGQPVSGAEGKFTLQPSGELLVKNLESQDAGTYTCVAENAVGR 4156

Query: 113  AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPN 172
            A+   + LS+LA P FT  P   +    + +   C A G P P I W  N +P+++    
Sbjct: 4157 ARRR-VHLSILALPVFTTLPGDRSLRLGDRLWLRCAARGSPTPRIGWTINDRPVTE---G 4212

Query: 173  PRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD 232
               + G + +    + + D+G Y C A N +G V    +V+V   AP + +     Y V+
Sbjct: 4213 VSEQDGGSTLQRVAVTREDSGTYVCWAENRVGRVQAVSFVHV-KEAP-VLQGEAFSYLVE 4270

Query: 233  --GKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI-LETGDLKITDVAFADSGEYTCFA 289
              G +V L C V GAP P++ WI +   L G R    L+ G L I      D+G+Y C A
Sbjct: 4271 PVGSSVQLDCVVHGAPAPDIRWIKDGLPLRGSRLRYRLQNGSLTIRRTEMDDAGQYQCLA 4330

Query: 290  RNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEP 349
             N++G  +    L ++       +P+D  V +G+    +C A  +P    ++ WLR  EP
Sbjct: 4331 ENEMGAVEKVVLLVLQSAPVFWVEPQDVTVRSGEDVALQCQASGEPV--PTVEWLRAGEP 4388

Query: 350  IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            +   +  R     D SL + +    D+G Y C AQ  L    A+A L V+
Sbjct: 4389 L--RASRRLRTLPDGSLWLQQVEAGDAGTYECVAQNLLGSATARAVLAVR 4436



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 160/357 (44%), Gaps = 11/357 (3%)

Query: 45   ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
            AL  K+V L C   G P P   W K+G+ I P+   +Q      L I HV   D G+Y C
Sbjct: 3999 ALVAKEVLLPCEASGIPRPSITWQKEGLSI-PAGASTQVLPTGQLRIIHVSPEDAGNYFC 4057

Query: 105  EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
               N  G A   +  L V   P        ++  E       C ASG PEP I W  +G+
Sbjct: 4058 LAQNSAGSAVGKT-RLVVQVPPVIETGLPDLSTTEGSHALLPCSASGSPEPSIAWEKDGQ 4116

Query: 165  PISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            P+S A    +  + P+  + ++NL   D G Y C A N++G   + V++++LA  P  T 
Sbjct: 4117 PVSGA--EGKFTLQPSGELLVKNLESQDAGTYTCVAENAVGRARRRVHLSILA-LPVFTT 4173

Query: 224  APKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSG 283
             P D     G  + L C   G+P P + W  N + +T G         L+   V   DSG
Sbjct: 4174 LPGDRSLRLGDRLWLRCAARGSPTPRIGWTINDRPVTEGVSEQDGGSTLQRVAVTREDSG 4233

Query: 284  EYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE-AGQSATFRCNAVSDPSLKLSIV 342
             Y C+A N++G  Q    + VKE   +  +   Y VE  G S    C     P+    I 
Sbjct: 4234 TYVCWAENRVGRVQAVSFVHVKEAPVLQGEAFSYLVEPVGSSVQLDCVVHGAPAPD--IR 4291

Query: 343  WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            W++   P+   S  R+   N  SLT+ ++   D+GQY C A+ E+  +E    L +Q
Sbjct: 4292 WIKDGLPLR-GSRLRYRLQNG-SLTIRRTEMDDAGQYQCLAENEMGAVEKVVLLVLQ 4346



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 166/372 (44%), Gaps = 21/372 (5%)

Query: 31   HAPKQQYVTRKKEV---ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGK 87
            H P Q    R+       +++ +  L C   G P P+  W +DG P+ P   +   N G+
Sbjct: 2293 HVPPQIAGPREPHTQVSVVQDGEATLQCNVTGKPPPRVTWERDGQPLRPEPGLRLQNQGQ 2352

Query: 88   SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFT--VEP-EFINAAEEETVT 144
             L ++  + +  G Y+C   N  G A+     LSVL  P     ++P   ++AA    +T
Sbjct: 2353 RLHVERAQAAHSGHYSCVAENVAGRAE-RRFALSVLVPPQLIGDLDPLTNVSAALHSPLT 2411

Query: 145  FECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLG 204
              C+A+G+P P + W    +PIS    +     G   + +   ++ D G Y C A+N  G
Sbjct: 2412 LLCEATGVPPPAVRWFRGEEPISPG-EDTYLLAGGWMLRMTRAQEQDRGFYSCLASNEAG 2470

Query: 205  YVYKDVYVNVLAHAPEITEAPKDEYTV--DGKTVVLTCRVFGAPKPEVNWIHNQKELTGG 262
             V ++  V VL   P I    ++E     +G+T  LTC   G P+P+V W  + + L GG
Sbjct: 2471 EVRRNFNVEVLV-PPRIENEDREESVKVPEGQTAHLTCNATGHPQPKVTWFKDGRPLAGG 2529

Query: 263  --RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGS---GSLTVKEHTHITDQPEDY 317
               +   +   L++     + SG Y+C A N +G          L V     +T+   D 
Sbjct: 2530 DAHHISPDGALLQVLQANLSSSGHYSCIAANAVGEKTRHFQLSVLVVPTILGVTEDSADE 2589

Query: 318  EVEAGQS--ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
            EV    S   +  C A++ PS   +I W++   P +  +  + +    + L +  + + D
Sbjct: 2590 EVTVTISNPISLICEALAFPS--PTITWMKDGAPFEASNNIQLLPGT-HGLQILNAQKED 2646

Query: 376  SGQYTCRAQTEL 387
            +GQYTC    EL
Sbjct: 2647 AGQYTCVVTNEL 2658



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 178/411 (43%), Gaps = 36/411 (8%)

Query: 50   KVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
            +V L C     P P   W KDG P+  + R      G+ L I+  +  D+G Y+C+VSN 
Sbjct: 3089 RVVLSCETDSLPEPTVTWHKDGQPLGLAQRTQTLLGGQRLEIRDTQVLDKGLYSCKVSNT 3148

Query: 110  VGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQ 168
             GEA    + L+V   P F   + E ++      +   C  +G+P P + W+ +  P+  
Sbjct: 3149 AGEAMRTFV-LTVQVPPTFENPKMEKVSQVAGSPLVLSCDVTGVPAPSVSWLKDRMPVES 3207

Query: 169  APPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE--APK 226
            +  +     G  R+ +  L+ +  G Y C A N+     KD  V VL  AP+I    A +
Sbjct: 3208 SVVHGVVSRG-GRLQLSRLQPAQAGTYTCVAENAQAEARKDFMVAVLV-APQIRSLGAAQ 3265

Query: 227  DEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDVAFAD 281
            +   ++G+ V L C   G P P+V W+ +   L  G     R+  L+ G L +  +   D
Sbjct: 3266 EHSVLEGQEVRLDCEADGQPPPDVTWLKDGGPLDQGVGPHLRF-YLDGGTLVLKGLKAED 3324

Query: 282  SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEV---EAGQSATFRCNAVSDPSLK 338
            SG YTC A N  G      +++V     I    E         G+  T  C       ++
Sbjct: 3325 SGAYTCVAHNAAGEDARLHTVSVLVPPTIEQWAESSGTLVSRPGELVTMACPVQGSAPIR 3384

Query: 339  LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
            +S  WL+   P+      R   S+  +L +++    DSG +TC A +     +   TL V
Sbjct: 3385 VS--WLKDGLPLPLSQRTRL-HSSGRTLRISQVQLADSGVFTCVAASPAGVTDRNFTLQV 3441

Query: 399  QV-PLEAPSNF----------TLIQVIDAKKA---VVSW----NPVSPQSL 431
             V P+  P  F          +++   +A+ +   +VSW     P+ PQSL
Sbjct: 3442 HVPPVLEPVEFQNDVAVVRGSSVVLPCEARGSPLPLVSWMKDGEPLLPQSL 3492



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 156/361 (43%), Gaps = 26/361 (7%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD-----QGSYTCEVS 107
            L C   G P P   WSK G  +       +GN  + L    +E         G YTC   
Sbjct: 3916 LTCHSTGVPAPVVSWSKAGTQLG-----MRGNGYRVLPSGALELGQALPIHSGRYTCTAR 3970

Query: 108  NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPIS 167
            N  G A  + + L+V A P     P  + A   + V   C+ASG+P P I W   G  I 
Sbjct: 3971 NSAGVAHKHMV-LTVQAPPVVKPLPSVVRALVAKEVLLPCEASGIPRPSITWQKEGLSI- 4028

Query: 168  QAPPNPRRKVGP-NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
              P     +V P  ++ I ++   D GNY C A NS G       + V+   P I     
Sbjct: 4029 --PAGASTQVLPTGQLRIIHVSPEDAGNYFCLAQNSAGSAVGKTRL-VVQVPPVIETGLP 4085

Query: 227  DEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG--GRYTILETGDLKITDVAFADSGE 284
            D  T +G   +L C   G+P+P + W  + + ++G  G++T+  +G+L + ++   D+G 
Sbjct: 4086 DLSTTEGSHALLPCSASGSPEPSIAWEKDGQPVSGAEGKFTLQPSGELLVKNLESQDAGT 4145

Query: 285  YTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWL 344
            YTC A N +G A+    L++      T  P D  +  G     RC A   P+ +  I W 
Sbjct: 4146 YTCVAENAVGRARRRVHLSILALPVFTTLPGDRSLRLGDRLWLRCAARGSPTPR--IGWT 4203

Query: 345  RGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEA 404
                P+   +E    Q    +L     +  DSG Y C A+  +  ++A + + V+   EA
Sbjct: 4204 INDRPV---TEGVSEQDGGSTLQRVAVTREDSGTYVCWAENRVGRVQAVSFVHVK---EA 4257

Query: 405  P 405
            P
Sbjct: 4258 P 4258



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/386 (24%), Positives = 162/386 (41%), Gaps = 12/386 (3%)

Query: 41   KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQG 100
            +  V L   ++ L C     P P+  W +DG+ +           G+ L ++ +  +D G
Sbjct: 3629 RSVVGLAPGQLILECSVEAEPAPKIEWHRDGILLQADAHTQFPEQGRFLQLQALSKADGG 3688

Query: 101  SYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV 160
             Y C   N  G + S +  + +   P     P  +NA+  +T    C+  G P P + W 
Sbjct: 3689 DYRCTAHNAAG-STSVAFHVEIHTVPTIQPGPAVVNASVNQTALLPCQVDGAPPPLVSWR 3747

Query: 161  HNGKPISQAPPNPRRKVGP-NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
             +G P+   P +PR +V P   + I+ +   D G+Y C A+NS G   +   + V    P
Sbjct: 3748 KDGAPLD--PDSPRLQVLPEGSLRIQPVLAQDAGHYLCLASNSAGSDRQGRDLQVF-EPP 3804

Query: 220  EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE----LTGGRYTILETGDLKIT 275
             IT  P +          L C   G+PKP V W  + ++    L  G Y +L +  L + 
Sbjct: 3805 AITPGPSNLTLTARTPTSLPCEASGSPKPRVVWRKDGQKLDFRLQQGAYRLLPSNALLLA 3864

Query: 276  DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
                 DS ++ C   N++G A+    LT+     I D   D+ V         C++   P
Sbjct: 3865 APGPQDSAQFECVVSNEVGEARRLYQLTIHVPPTIADDQTDFTVTRLAPGVLTCHSTGVP 3924

Query: 336  SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
            +  +S  W +    +        V  +  +L + ++  + SG+YTC A+           
Sbjct: 3925 APVVS--WSKAGTQLGMRGNGYRVLPSG-ALELGQALPIHSGRYTCTARNSAGVAHKHMV 3981

Query: 396  LTVQVPLEAPSNFTLIQVIDAKKAVV 421
            LTVQ P       ++++ + AK+ ++
Sbjct: 3982 LTVQAPPVVKPLPSVVRALVAKEVLL 4007



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 148/365 (40%), Gaps = 17/365 (4%)

Query: 48   NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            N+ V L C     P P   W KDG P+ P   I        L +   E  D G YTCE  
Sbjct: 2125 NESVALECRSQAVPAPVLSWRKDGRPLEPRPGIHLSPDKALLEVSRAEVGDAGRYTCEAL 2184

Query: 108  NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPI 166
            N  G ++ +  +L+V   P F + EP  +   E +     C+  G+P P+I W  +G+P+
Sbjct: 2185 NQAGRSEKH-YNLNVWVPPVFPSREPRTLTVTEGQPARLSCECRGIPFPKIFWRKDGEPL 2243

Query: 167  SQAPPNPRRKVGPNRIT-IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
                 +  R     R+  +   + +  G Y C  +N  G   +D  + V  H P     P
Sbjct: 2244 PGEGNSLERVSAVGRLLYLGQAQLAQDGTYTCECSNVAGNSSQDQLLEV--HVPPQIAGP 2301

Query: 226  KDEYT----VDGKTVVLTCRVFGAPKPEVNWIHNQKELTG--GRYTILETGDLKITDVAF 279
            ++ +T    V      L C V G P P V W  + + L    G     +   L +     
Sbjct: 2302 REPHTQVSVVQDGEATLQCNVTGKPPPRVTWERDGQPLRPEPGLRLQNQGQRLHVERAQA 2361

Query: 280  ADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT---DQPEDYEVEAGQSATFRCNAVSDPS 336
            A SG Y+C A N  G A+   +L+V     +    D   +         T  C A   P 
Sbjct: 2362 AHSGHYSCVAENVAGRAERRFALSVLVPPQLIGDLDPLTNVSAALHSPLTLLCEATGVP- 2420

Query: 337  LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
               ++ W RG EPI    E  ++ +  + L +T++ E D G Y+C A  E   +     +
Sbjct: 2421 -PPAVRWFRGEEPIS-PGEDTYLLAGGWMLRMTRAQEQDRGFYSCLASNEAGEVRRNFNV 2478

Query: 397  TVQVP 401
             V VP
Sbjct: 2479 EVLVP 2483



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 167/394 (42%), Gaps = 46/394 (11%)

Query: 42   KEVALR-NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQG 100
            KEV  + N  + L C     P P   W KDG P+ P+ R+     G+ L I+    SD G
Sbjct: 2687 KEVKTKVNSTLTLECESWAVPPPTISWYKDGRPVTPNQRLRILGEGRLLQIQPTRVSDSG 2746

Query: 101  SYTCEVSNGVGEAKSYSIDLSVL------------AAPYFTVEP----------EFINAA 138
             Y C  SN  GE      D SVL            A+  F V            E+    
Sbjct: 2747 RYLCVASNVAGEDDQ---DFSVLIQVPPMFQKVGDASAAFEVLSREEEARGGVTEYREIV 2803

Query: 139  EEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCN 198
            E       C  + +P PE+ W  + +P+S A      + G   + I  +R+ D G Y C 
Sbjct: 2804 ENNPAYLYCDTNAIPPPELTWYRDDQPLSAADGVSVLQGG-RVLQIPLVREEDAGRYSCK 2862

Query: 199  ATNSLG--YVYKDVYV----NVLAHAPEITEAPKDEYTVDG-KTVVLTCRVFGAPKPEVN 251
            A N +G  +++  + V     +L H  E+ E    E TV+   TV L C   G P P + 
Sbjct: 2863 AFNEVGEDWLHYQLLVLTPPVILGHTEELVE----EVTVNASSTVSLHCPALGNPVPTIA 2918

Query: 252  WIHNQKELT-GGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH 309
            W+ N   L+   R  +LE G  L+++    AD+  Y C A N  G+++   +L V+    
Sbjct: 2919 WLQNGLPLSPSPRLQVLEDGQVLQVSTAEVADAASYMCVAENPAGSSEKLFTLRVQAPPR 2978

Query: 310  ITDQPEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
            IT  P   +V A    S +  C+  + PS +  + W R S+ +    E  F+    ++L 
Sbjct: 2979 ITG-PNLEQVTAIINSSISLSCDVHAHPSPE--VTWYRNSQALSLGKE-VFLLPGTHTLQ 3034

Query: 368  VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            + ++   DSG Y C A       +    L+V VP
Sbjct: 3035 LARAQPSDSGMYACEALNAAGRDQKLVQLSVLVP 3068



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 152/382 (39%), Gaps = 25/382 (6%)

Query: 30  RHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSL 89
           R AP+    TR +  + +  +V + C   G P P   WS++G  +    RI     G +L
Sbjct: 621 REAPQVSIHTRSQHFS-QGMEVSVSCSASGYPTPHISWSREGHALREDSRIRVDAQG-TL 678

Query: 90  IIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA 149
           II+ V   D G+Y+C+ +N VG  +  ++ L     P  +     + AA        C  
Sbjct: 679 IIQGVAPEDAGNYSCQAANEVGTDEE-TVTLYHTDPPSVSAVKAVVLAAIGNEAVLVCDV 737

Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
           SG+P P + W   G  +  AP           + I   ++ D G Y C A N +G    +
Sbjct: 738 SGVPPPRVVWYRGGLEMILAP----EGSSSGTLRIPAAQERDAGVYTCRAVNEIGDASAE 793

Query: 210 VYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT----GGRYT 265
           + + V  HAP++ E P+D     G + +L CR  G P P V W     +      G R  
Sbjct: 794 IRLEV-GHAPQLMELPRDVTVELGSSALLACRAMGRPPPMVTWRRGDGQPLGPGRGSRTR 852

Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
             ++G L    V   D   Y C A+N  G  +    L V  H      P      A    
Sbjct: 853 QPDSGVLFFESVVPEDQALYVCEAQNVFGKVRAEARLVVTGHV-----PPQIASSASTVR 907

Query: 326 TFRCNAVSDPSLKLS------IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQY 379
                 VS P + L+        WL+   P+   S  R     D SL + ++ + D+G+Y
Sbjct: 908 VLERQPVSLPCIILAGRPFPERRWLKAGLPLPAGS--RHSVRADGSLHLDRALQEDAGKY 965

Query: 380 TCRAQTELDFIEAQATLTVQVP 401
           +C              L VQVP
Sbjct: 966 SCVVTNTAGSQHRAVELVVQVP 987



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 142/358 (39%), Gaps = 11/358 (3%)

Query: 48   NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            N+   L C   G P P   W KDG P++P     Q     SL I+ V   D G Y C  S
Sbjct: 3727 NQTALLPCQVDGAPPPLVSWRKDGAPLDPDSPRLQVLPEGSLRIQPVLAQDAGHYLCLAS 3786

Query: 108  NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPIS 167
            N  G  +    DL V   P  T  P  +        +  C+ASG P+P + W  +G+ + 
Sbjct: 3787 NSAGSDRQ-GRDLQVFEPPAITPGPSNLTLTARTPTSLPCEASGSPKPRVVWRKDGQKLD 3845

Query: 168  -QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
             +      R +  N + +      D+  + C  +N +G   +   + +  H P      +
Sbjct: 3846 FRLQQGAYRLLPSNALLLAAPGPQDSAQFECVVSNEVGEARRLYQLTI--HVPPTIADDQ 3903

Query: 227  DEYTVDGKTV-VLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADSG 283
             ++TV      VLTC   G P P V+W     Q  + G  Y +L +G L++       SG
Sbjct: 3904 TDFTVTRLAPGVLTCHSTGVPAPVVSWSKAGTQLGMRGNGYRVLPSGALELGQALPIHSG 3963

Query: 284  EYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVW 343
             YTC ARN  G A     LTV+    +   P        +     C A   P  + SI W
Sbjct: 3964 RYTCTARNSAGVAHKHMVLTVQAPPVVKPLPSVVRALVAKEVLLPCEASGIP--RPSITW 4021

Query: 344  LRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
             +    I   +  + + +    L +   S  D+G Y C AQ        +  L VQVP
Sbjct: 4022 QKEGLSIPAGASTQVLPTGQ--LRIIHVSPEDAGNYFCLAQNSAGSAVGKTRLVVQVP 4077



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 150/368 (40%), Gaps = 17/368 (4%)

Query: 45   ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
            A+ N  + L C     P P+  W ++   ++    +       +L +   + SD G Y C
Sbjct: 2989 AIINSSISLSCDVHAHPSPEVTWYRNSQALSLGKEVFLLPGTHTLQLARAQPSDSGMYAC 3048

Query: 105  EVSNGVGEAKSYSIDLSVLAAPYFTVEP----EFINAAEEETVTFECKASGLPEPEIHWV 160
            E  N  G  +   + LSVL  P F   P    + I     + V   C+   LPEP + W 
Sbjct: 3049 EALNAAGRDQKL-VQLSVLVPPTFRQPPSGPQDAIVVRAGDRVVLSCETDSLPEPTVTWH 3107

Query: 161  HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
             +G+P+  A    +  +G  R+ I + +  D G Y C  +N+ G   +   + V    P 
Sbjct: 3108 KDGQPLGLA-QRTQTLLGGQRLEIRDTQVLDKGLYSCKVSNTAGEAMRTFVLTV--QVPP 3164

Query: 221  ITEAPKDEYT--VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG--RYTILETGDLKITD 276
              E PK E    V G  +VL+C V G P P V+W+ ++  +        +   G L+++ 
Sbjct: 3165 TFENPKMEKVSQVAGSPLVLSCDVTGVPAPSVSWLKDRMPVESSVVHGVVSRGGRLQLSR 3224

Query: 277  VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD--QPEDYEVEAGQSATFRCNAVSD 334
            +  A +G YTC A N    A+    + V     I      +++ V  GQ     C A   
Sbjct: 3225 LQPAQAGTYTCVAENAQAEARKDFMVAVLVAPQIRSLGAAQEHSVLEGQEVRLDCEADGQ 3284

Query: 335  PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL-DSGQYTCRAQTELDFIEAQ 393
            P     + WL+   P+D    P      D    V K  +  DSG YTC A          
Sbjct: 3285 P--PPDVTWLKDGGPLDQGVGPHLRFYLDGGTLVLKGLKAEDSGAYTCVAHNAAGEDARL 3342

Query: 394  ATLTVQVP 401
             T++V VP
Sbjct: 3343 HTVSVLVP 3350



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 163/395 (41%), Gaps = 21/395 (5%)

Query: 43   EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
            +  L N  V L C+  G P P   W K   P++    ++    G+ + I+   FSD GSY
Sbjct: 1935 KAVLENASVTLECLASGVPPPDISWFKGRQPVSARKGVTVSADGRVIRIERARFSDAGSY 1994

Query: 103  TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPE-----FINAAEEETVTFECKASGLPEPEI 157
             C  SN  G  +     L V   P  T+ P       +NA     V   C A+G P P +
Sbjct: 1995 RCVASNVAGSTE-LQYGLRVNVPPRITLPPSLPGPVLLNAP----VRLTCNATGAPSPTL 2049

Query: 158  HWVHNGKPISQAPPNPRRKVGPNRI-TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
             W+ +G P+S    +  +     R+ T+ + R SD+G+Y C A +++G   +DV + V  
Sbjct: 2050 MWLKDGNPVSTGGASGLQVFPGGRVLTLASARASDSGSYSCVAVSAVGEDRRDVVLYVHT 2109

Query: 217  HAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL--TGGRYTILETGDLKI 274
              P I     +   V  ++V L CR    P P ++W  + + L    G +   +   L++
Sbjct: 2110 -PPSILGEELNVSVVANESVALECRSQAVPAPVLSWRKDGRPLEPRPGIHLSPDKALLEV 2168

Query: 275  TDVAFADSGEYTCFARNKLGTAQGSGSLTV-KEHTHITDQPEDYEVEAGQSATFRCNAVS 333
            +     D+G YTC A N+ G ++   +L V       + +P    V  GQ A   C    
Sbjct: 2169 SRAEVGDAGRYTCEALNQAGRSEKHYNLNVWVPPVFPSREPRTLTVTEGQPARLSCECRG 2228

Query: 334  DPSLKLSIVWLRGSEPIDFESEP-RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
             P  K  I W +  EP+  E      V +    L + ++     G YTC           
Sbjct: 2229 IPFPK--IFWRKDGEPLPGEGNSLERVSAVGRLLYLGQAQLAQDGTYTCECSNVAGNSSQ 2286

Query: 393  QATLTVQVP--LEAPSN-FTLIQVIDAKKAVVSWN 424
               L V VP  +  P    T + V+   +A +  N
Sbjct: 2287 DQLLEVHVPPQIAGPREPHTQVSVVQDGEATLQCN 2321



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 151/377 (40%), Gaps = 22/377 (5%)

Query: 44   VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSD-RISQGNYGKSLIIKHVEFSDQGSY 102
            + L   KVEL C   G P PQ  W+KDG P+ P D R+     G+ L I      D+G Y
Sbjct: 1470 LGLAGAKVELECWTSGVPAPQVEWTKDGQPVLPGDPRVQLQEDGQVLRITSSHLGDEGRY 1529

Query: 103  TCEVSNGVG-EAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVH 161
             C   +  G + K + + +      + + E   +   E   V F C+A G+P P+I W  
Sbjct: 1530 QCVAFSPAGQQTKDFQLRMQAPPTIWGSNETNEVAVMEGRPVRFLCEARGVPAPDITWFK 1589

Query: 162  NGKPISQAPPNPRRKV---GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
            +G  +    P+    V   G  ++ +   R  D G Y C A+N +G   K   + V  + 
Sbjct: 1590 DGASL----PHSTEAVYTRGGRQLQLGRARGVDAGTYTCQASNPVGVTEKSTRLEV--YV 1643

Query: 219  PEITE----APKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD--L 272
            P   E     P     V G+ + L C   G P P ++W H    +     T LE G   L
Sbjct: 1644 PPTIEGAGGGPHVVKAVAGRPLALECVARGHPLPTLSWHHEGLPVAESNETWLEAGGRVL 1703

Query: 273  KITDVAFADSGEYTCFARNKLGTA--QGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN 330
             +  +  A  G Y+C A +  G A  Q S  + V     + +         GQ     C 
Sbjct: 1704 SLESLGEASGGPYSCVASSPAGEAVLQYSVEVQVPPQLLVAEGSGQVTALVGQPLELPCQ 1763

Query: 331  AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
            A   P   L   WL+   P + E     V S   +L ++      +G + C+A  E    
Sbjct: 1764 ASGSPVPTLQ--WLQNGRPAE-ELAGVQVASRGATLRISHVELDHAGLFACQATNEAGTT 1820

Query: 391  EAQATLTVQVPLEAPSN 407
             A+  L+V     AP+ 
Sbjct: 1821 GAEVELSVHGEGAAPTG 1837



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 161/393 (40%), Gaps = 47/393 (11%)

Query: 33   PKQQYVTRKKEVAL-RNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLII 91
            P+ +   R++ V +   +   L C   G P P+  W KDG P+   D       G  L +
Sbjct: 2484 PRIENEDREESVKVPEGQTAHLTCNATGHPQPKVTWFKDGRPLAGGDAHHISPDGALLQV 2543

Query: 92   KHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFE----- 146
                 S  G Y+C  +N VGE K+    LSVL  P      E  +A EE TVT       
Sbjct: 2544 LQANLSSSGHYSCIAANAVGE-KTRHFQLSVLVVPTILGVTED-SADEEVTVTISNPISL 2601

Query: 147  -CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGY 205
             C+A   P P I W+ +G P  +A  N +   G + + I N +K D G Y C  TN LG 
Sbjct: 2602 ICEALAFPSPTITWMKDGAPF-EASNNIQLLPGTHGLQILNAQKEDAGQYTCVVTNELGE 2660

Query: 206  VYKDVYVNVLAHAPEITEAP-------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE 258
              K+ +V VL   P I++         K+  T    T+ L C  +  P P ++W  + + 
Sbjct: 2661 AMKNYHVEVLI-PPSISKDDALGEANVKEVKTKVNSTLTLECESWAVPPPTISWYKDGRP 2719

Query: 259  LT-GGRYTILETGD-LKITDVAFADSGEYTCFARN--------------------KLGTA 296
            +T   R  IL  G  L+I     +DSG Y C A N                    K+G A
Sbjct: 2720 VTPNQRLRILGEGRLLQIQPTRVSDSGRYLCVASNVAGEDDQDFSVLIQVPPMFQKVGDA 2779

Query: 297  QGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC--NAVSDPSLKLSIVWLRGSEPIDFES 354
              +  +  +E        E  E+     A   C  NA+  P L     W R  +P+    
Sbjct: 2780 SAAFEVLSREEEARGGVTEYREIVENNPAYLYCDTNAIPPPEL----TWYRDDQPLSAAD 2835

Query: 355  EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
                +Q     L +    E D+G+Y+C+A  E+
Sbjct: 2836 GVSVLQGGRV-LQIPLVREEDAGRYSCKAFNEV 2867



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 151/331 (45%), Gaps = 29/331 (8%)

Query: 91   IKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAA--EEETVTFECK 148
            I+ V+  D+G YTC  ++  GE+K   + L VL  P   +EP  +N A  E  +VT EC 
Sbjct: 1892 IEKVDLRDEGVYTCAATSLAGESKR-DVALKVLVPP--NIEPGPLNKAVLENASVTLECL 1948

Query: 149  ASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR----ITIENLRKSDTGNYGCNATNSLG 204
            ASG+P P+I W    +P+S      R+ V  +     I IE  R SD G+Y C A+N  G
Sbjct: 1949 ASGVPPPDISWFKGRQPVSA-----RKGVTVSADGRVIRIERARFSDAGSYRCVASNVAG 2003

Query: 205  Y--VYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQKELTG 261
               +   + VNV    P IT  P     V     V LTC   GAP P + W+ +   ++ 
Sbjct: 2004 STELQYGLRVNV---PPRITLPPSLPGPVLLNAPVRLTCNATGAPSPTLMWLKDGNPVST 2060

Query: 262  GRYTILETGD----LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDY 317
            G  + L+       L +     +DSG Y+C A + +G  +    L V     I  +  + 
Sbjct: 2061 GGASGLQVFPGGRVLTLASARASDSGSYSCVAVSAVGEDRRDVVLYVHTPPSILGEELNV 2120

Query: 318  EVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL-DS 376
             V A +S    C + + P+  LS  W +   P+  E  P    S D +L     +E+ D+
Sbjct: 2121 SVVANESVALECRSQAVPAPVLS--WRKDGRPL--EPRPGIHLSPDKALLEVSRAEVGDA 2176

Query: 377  GQYTCRAQTELDFIEAQATLTVQVPLEAPSN 407
            G+YTC A  +    E    L V VP   PS 
Sbjct: 2177 GRYTCEALNQAGRSEKHYNLNVWVPPVFPSR 2207



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 140/339 (41%), Gaps = 26/339 (7%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
           SL +  +  SD G Y C  SN  G  ++ S+ L V  AP  ++     + ++   V+  C
Sbjct: 587 SLEVSDIIPSDGGRYQCMASNANGVTRA-SMWLLVREAPQVSIHTRSQHFSQGMEVSVSC 645

Query: 148 KASGLPEPEIHWVHNGKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYV 206
            ASG P P I W   G  + +   + R +V     + I+ +   D GNY C A N +G  
Sbjct: 646 SASGYPTPHISWSREGHALRE---DSRIRVDAQGTLIIQGVAPEDAGNYSCQAANEVG-- 700

Query: 207 YKDVYVNVLAHA--PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRY 264
             D     L H   P ++          G   VL C V G P P V W        GG  
Sbjct: 701 -TDEETVTLYHTDPPSVSAVKAVVLAAIGNEAVLVCDVSGVPPPRVVWYR------GGLE 753

Query: 265 TIL-----ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEV 319
            IL      +G L+I      D+G YTC A N++G A     L V     + + P D  V
Sbjct: 754 MILAPEGSSSGTLRIPAAQERDAGVYTCRAVNEIGDASAEIRLEVGHAPQLMELPRDVTV 813

Query: 320 EAGQSATFRCNAVSDPSLKLSIVWLRG-SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQ 378
           E G SA   C A+  P     + W RG  +P+      R  Q +   L        D   
Sbjct: 814 ELGSSALLACRAMGRPPPM--VTWRRGDGQPLGPGRGSRTRQPDSGVLFFESVVPEDQAL 871

Query: 379 YTCRAQTELDFIEAQATLTV--QVPLEAPSNFTLIQVID 415
           Y C AQ     + A+A L V   VP +  S+ + ++V++
Sbjct: 872 YVCEAQNVFGKVRAEARLVVTGHVPPQIASSASTVRVLE 910



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 167/375 (44%), Gaps = 34/375 (9%)

Query: 41   KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY--GKSLIIKHVEFSD 98
            ++   L  ++V L C   G P P   W KDG P++         Y  G +L++K ++  D
Sbjct: 3265 QEHSVLEGQEVRLDCEADGQPPPDVTWLKDGGPLDQGVGPHLRFYLDGGTLVLKGLKAED 3324

Query: 99   QGSYTCEVSNGVGE-AKSYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPE 154
             G+YTC   N  GE A+ +++  SVL  P      E    + +   E VT  C   G   
Sbjct: 3325 SGAYTCVAHNAAGEDARLHTV--SVLVPPTIEQWAESSGTLVSRPGELVTMACPVQGSAP 3382

Query: 155  PEIHWVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYV 212
              + W+ +G P+   P + R ++  +   + I  ++ +D+G + C A +  G   ++  +
Sbjct: 3383 IRVSWLKDGLPL---PLSQRTRLHSSGRTLRISQVQLADSGVFTCVAASPAGVTDRNFTL 3439

Query: 213  NVLAHAPEITEAPK---DEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILET 269
             V  H P + E  +   D   V G +VVL C   G+P P V+W+ + + L       LE 
Sbjct: 3440 QV--HVPPVLEPVEFQNDVAVVRGSSVVLPCEARGSPLPLVSWMKDGEPLL---PQSLEQ 3494

Query: 270  G-DLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD--QPEDYEVEAGQSAT 326
            G  L++     ADSG Y+C A ++ G A+    LTV +  HI D  Q  +  + AG    
Sbjct: 3495 GPSLQLERAGAADSGTYSCVAVSEAGEARRHFQLTVMDPPHIEDSGQTAELLLPAGSPME 3554

Query: 327  FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
             RC+A   P    +I W +    +         +  D +  +      D+G YTC AQ+ 
Sbjct: 3555 LRCDARGTP--PPNITWHKDGLALS--------RPEDSNRVLRMEGVGDAGLYTCLAQSP 3604

Query: 387  LDFIEAQATLTVQVP 401
               +E    + VQ P
Sbjct: 3605 AGEVEKSFRVRVQGP 3619



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 166/402 (41%), Gaps = 30/402 (7%)

Query: 18   NVIATGISASQNR------HAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDG 71
            + + T  + SQ+R        P +   T    V      V L C+  G P P   W+K+ 
Sbjct: 966  SCVVTNTAGSQHRAVELVVQVPPRIQPTATHHVTNEGVPVSLPCVASGVPTPTITWTKET 1025

Query: 72   VPINPSDRISQGNYGK--SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFT 129
              +  + R    N  K  +L+I      D G+Y C  +N VG + S  + LSV   P   
Sbjct: 1026 NVL--TSRGPHYNVSKDGTLVITRPSPQDAGTYVCTATNAVGFS-SQEMRLSVNTEPRIH 1082

Query: 130  V-------EPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN-R 181
            V       EP  + A   + VT +C+A G P P + W  + +P+       R ++ P+  
Sbjct: 1083 VNGSHDADEPLRVTAKAGDEVTLDCEAQGSPAPLVTWTKDFRPVPSV--TDRHRLLPSGS 1140

Query: 182  ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR 241
            + +   +  D+G Y C A+N  G   +  YV  +   P++   P+    + G+ + L C 
Sbjct: 1141 LRLAQAQVGDSGLYRCIASNPAGSASQH-YVLQVQVPPQVQPGPRVLKVLAGEILDLNCV 1199

Query: 242  VFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGS 301
              G P+P++NW  +   L GG       G +  + +  +D+G Y C A N  G       
Sbjct: 1200 AEGTPEPQLNWSKDGAALQGGG----PEGSVHFSAIQTSDAGLYRCEASNSAGMDAWELE 1255

Query: 302  LTVKE--HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFV 359
            L V E  H    +     E   G++A+  C A   P  K  + W +G         P   
Sbjct: 1256 LRVLEPPHWEADETSGLLERVVGENASLPCPARGTP--KPQVTWRKGPSSEPLRGRPGLE 1313

Query: 360  QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
              +D SL +   S  DSG Y C+A  E      +A L V VP
Sbjct: 1314 VLDDGSLFLASVSASDSGDYECQASNEAGSTSRRAKLVVYVP 1355



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 150/368 (40%), Gaps = 24/368 (6%)

Query: 31   HAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPS--DRISQGNYGK 87
            HAP+   + R   V L +  + L C   G P P   W + DG P+ P    R  Q + G 
Sbjct: 800  HAPQLMELPRDVTVELGSSAL-LACRAMGRPPPMVTWRRGDGQPLGPGRGSRTRQPDSG- 857

Query: 88   SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-IDLSVLAAPYFTVEPEFINAAEEETVTFE 146
             L  + V   DQ  Y CE  N  G+ ++ + + ++    P        +   E + V+  
Sbjct: 858  VLFFESVVPEDQALYVCEAQNVFGKVRAEARLVVTGHVPPQIASSASTVRVLERQPVSLP 917

Query: 147  CK-ASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGY 205
            C   +G P PE  W+  G P+     +  R  G   + ++   + D G Y C  TN+ G 
Sbjct: 918  CIILAGRPFPERRWLKAGLPLPAGSRHSVRADG--SLHLDRALQEDAGKYSCVVTNTAGS 975

Query: 206  VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT--GGR 263
             ++ V + V+   P I        T +G  V L C   G P P + W      LT  G  
Sbjct: 976  QHRAVEL-VVQVPPRIQPTATHHVTNEGVPVSLPCVASGVPTPTITWTKETNVLTSRGPH 1034

Query: 264  YTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEH-------THITDQPED 316
            Y + + G L IT  +  D+G Y C A N +G +     L+V          +H  D+P  
Sbjct: 1035 YNVSKDGTLVITRPSPQDAGTYVCTATNAVGFSSQEMRLSVNTEPRIHVNGSHDADEPLR 1094

Query: 317  YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPI-DFESEPRFVQSNDYSLTVTKSSELD 375
               +AG   T  C A   P+    + W +   P+       R + S   SL + ++   D
Sbjct: 1095 VTAKAGDEVTLDCEAQGSPAPL--VTWTKDFRPVPSVTDRHRLLPSG--SLRLAQAQVGD 1150

Query: 376  SGQYTCRA 383
            SG Y C A
Sbjct: 1151 SGLYRCIA 1158



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 156/385 (40%), Gaps = 33/385 (8%)

Query: 40   RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPIN---------PSDRISQGNYGKSLI 90
            R     +  + + L C   G P P+ +W KDG P+           + R    +   +L 
Sbjct: 1364 RANLSGMAGQSLTLECDANGFPAPEIVWFKDGQPVGVLWRGWAIPETGRHRLLDKPWALH 1423

Query: 91   IKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFT---VEPEFINAAEEETVTFEC 147
               ++  D G Y+C   N  G A+    DL VL  P         E +  A  + V  EC
Sbjct: 1424 FPRIQEGDSGLYSCRAENQAGTAQR-DFDLLVLIPPSVMGAGAAQEVLGLAGAK-VELEC 1481

Query: 148  KASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN----RITIENLRKSDTGNYGCNATNSL 203
              SG+P P++ W  +G+P+   P +PR ++  +    RIT  +L   D G Y C A +  
Sbjct: 1482 WTSGVPAPQVEWTKDGQPV--LPGDPRVQLQEDGQVLRITSSHL--GDEGRYQCVAFSPA 1537

Query: 204  GYVYKDVYVNVLAHAPEI--TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG 261
            G   KD  + + A  P I  +    +   ++G+ V   C   G P P++ W  +   L  
Sbjct: 1538 GQQTKDFQLRMQA-PPTIWGSNETNEVAVMEGRPVRFLCEARGVPAPDITWFKDGASLPH 1596

Query: 262  GRYTILETG--DLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ---PED 316
                +   G   L++      D+G YTC A N +G  + S  L V     I      P  
Sbjct: 1597 STEAVYTRGGRQLQLGRARGVDAGTYTCQASNPVGVTEKSTRLEVYVPPTIEGAGGGPHV 1656

Query: 317  YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
             +  AG+     C A   P   LS  W     P+  ES   ++++    L++    E   
Sbjct: 1657 VKAVAGRPLALECVARGHPLPTLS--WHHEGLPV-AESNETWLEAGGRVLSLESLGEASG 1713

Query: 377  GQYTCRAQTELDFIEAQATLTVQVP 401
            G Y+C A +       Q ++ VQVP
Sbjct: 1714 GPYSCVASSPAGEAVLQYSVEVQVP 1738



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 132/321 (41%), Gaps = 16/321 (4%)

Query: 31   HAPKQQYVTRKKEVALRNKKVELFCI-FGGTPLPQTIWSKDGVPINPSDRISQGNYGKSL 89
            H P Q   +      L  + V L CI   G P P+  W K G+P+    R S    G SL
Sbjct: 894  HVPPQIASSASTVRVLERQPVSLPCIILAGRPFPERRWLKAGLPLPAGSRHSVRADG-SL 952

Query: 90   IIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA 149
             +      D G Y+C V+N  G ++  +++L V   P            E   V+  C A
Sbjct: 953  HLDRALQEDAGKYSCVVTNTAG-SQHRAVELVVQVPPRIQPTATHHVTNEGVPVSLPCVA 1011

Query: 150  SGLPEPEIHWVHNGKPI-SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYK 208
            SG+P P I W      + S+ P     K G   + I      D G Y C ATN++G+  +
Sbjct: 1012 SGVPTPTITWTKETNVLTSRGPHYNVSKDG--TLVITRPSPQDAGTYVCTATNAVGFSSQ 1069

Query: 209  DVYVNVLAHAPEI-------TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG 261
            ++ ++V    P I        + P       G  V L C   G+P P V W  + + +  
Sbjct: 1070 EMRLSVNTE-PRIHVNGSHDADEPLRVTAKAGDEVTLDCEAQGSPAPLVTWTKDFRPVPS 1128

Query: 262  --GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEV 319
               R+ +L +G L++      DSG Y C A N  G+A     L V+    +   P   +V
Sbjct: 1129 VTDRHRLLPSGSLRLAQAQVGDSGLYRCIASNPAGSASQHYVLQVQVPPQVQPGPRVLKV 1188

Query: 320  EAGQSATFRCNAVSDPSLKLS 340
             AG+     C A   P  +L+
Sbjct: 1189 LAGEILDLNCVAEGTPEPQLN 1209



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 169/406 (41%), Gaps = 41/406 (10%)

Query: 51   VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            V + C   G+   +  W KDG+P+  S R    + G++L I  V+ +D G +TC  ++  
Sbjct: 3371 VTMACPVQGSAPIRVSWLKDGLPLPLSQRTRLHSSGRTLRISQVQLADSGVFTCVAASPA 3430

Query: 111  GEAKSYSIDLSVLAAPYFTVEP-EFIN---AAEEETVTFECKASGLPEPEIHWVHNGKPI 166
            G     +  L V   P    EP EF N        +V   C+A G P P + W+ +G+P+
Sbjct: 3431 G-VTDRNFTLQVHVPPVL--EPVEFQNDVAVVRGSSVVLPCEARGSPLPLVSWMKDGEPL 3487

Query: 167  SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
                P    + GP+ + +E    +D+G Y C A +  G   +   + V+   P I ++ +
Sbjct: 3488 L---PQSLEQ-GPS-LQLERAGAADSGTYSCVAVSEAGEARRHFQLTVM-DPPHIEDSGQ 3541

Query: 227  DEYTV--DGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGE 284
                +   G  + L C   G P P + W  +     G   +  E  +  +      D+G 
Sbjct: 3542 TAELLLPAGSPMELRCDARGTPPPNITWHKD-----GLALSRPEDSNRVLRMEGVGDAGL 3596

Query: 285  YTCFARNKLGTAQGSGSLTVKEHTHITDQ--PEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
            YTC A++  G  + S  + V+   HI     P      A       C+  ++P+ K  I 
Sbjct: 3597 YTCLAQSPAGEVEKSFRVRVQGPPHIIGPRGPRSVVGLAPGQLILECSVEAEPAPK--IE 3654

Query: 343  WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ-----TELDF-IEAQATL 396
            W R    +  ++  +F +   + L +   S+ D G Y C A      T + F +E     
Sbjct: 3655 WHRDGILLQADAHTQFPEQGRF-LQLQALSKADGGDYRCTAHNAAGSTSVAFHVEIHTVP 3713

Query: 397  TVQ---VPLEAPSNFTLI---QVIDAKKAVVSWN----PVSPQSLR 432
            T+Q     + A  N T +   QV  A   +VSW     P+ P S R
Sbjct: 3714 TIQPGPAVVNASVNQTALLPCQVDGAPPPLVSWRKDGAPLDPDSPR 3759



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 4/154 (2%)

Query: 51   VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
            V+L C+  G P P   W KDG+P+  S R+       SL I+  E  D G Y C   N +
Sbjct: 4276 VQLDCVVHGAPAPDIRWIKDGLPLRGS-RLRYRLQNGSLTIRRTEMDDAGQYQCLAENEM 4334

Query: 111  GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAP 170
            G  +   + L + +AP F VEP+ +     E V  +C+ASG P P + W+  G+P+  + 
Sbjct: 4335 GAVEKVVL-LVLQSAPVFWVEPQDVTVRSGEDVALQCQASGEPVPTVEWLRAGEPLRAS- 4392

Query: 171  PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLG 204
                R +    + ++ +   D G Y C A N LG
Sbjct: 4393 -RRLRTLPDGSLWLQQVEAGDAGTYECVAQNLLG 4425



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 150/374 (40%), Gaps = 33/374 (8%)

Query: 45   ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
            A+  + + L C+  G PLP   W  +G+P+  S+       G+ L ++ +  +  G Y+C
Sbjct: 1659 AVAGRPLALECVARGHPLPTLSWHHEGLPVAESNETWLEAGGRVLSLESLGEASGGPYSC 1718

Query: 105  EVSNGVGEA-KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
              S+  GEA   YS+++ V            + A   + +   C+ASG P P + W+ NG
Sbjct: 1719 VASSPAGEAVLQYSVEVQVPPQLLVAEGSGQVTALVGQPLELPCQASGSPVPTLQWLQNG 1778

Query: 164  KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            +P  +         G   + I ++     G + C ATN  G    +V ++V         
Sbjct: 1779 RPAEELAGVQVASRGAT-LRISHVELDHAGLFACQATNEAGTTGAEVELSVHGEG----A 1833

Query: 224  APKDEYTVDGKTVVLTCRVFGAPKPEV-------NW-IHNQKELT---GGRYTIL-ETGD 271
            AP   +           R + +P P         +W  H +  L    GG  ++  ET  
Sbjct: 1834 APTGGHRWG--------RQYHSPFPAACDPPMCGDWGTHPKSPLVEGWGGPGSLAGETAG 1885

Query: 272  L----KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
                 +I  V   D G YTC A +  G ++   +L V    +I   P +  V    S T 
Sbjct: 1886 TFRGPRIEKVDLRDEGVYTCAATSLAGESKRDVALKVLVPPNIEPGPLNKAVLENASVTL 1945

Query: 328  RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
             C A   P   +S  W +G +P+    +   V ++   + + ++   D+G Y C A    
Sbjct: 1946 ECLASGVPPPDIS--WFKGRQPVSAR-KGVTVSADGRVIRIERARFSDAGSYRCVASNVA 2002

Query: 388  DFIEAQATLTVQVP 401
               E Q  L V VP
Sbjct: 2003 GSTELQYGLRVNVP 2016



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 7/215 (3%)

Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVF 243
           I    K++ G Y C A +  G       + V    P++  AP    ++ G+T VL+C+V 
Sbjct: 499 IPRASKTEEGAYECTAVSRAGTGRAKAQIVVTDPPPQLVPAPNITVSL-GETAVLSCQVL 557

Query: 244 GAPKPEVNWIHNQKELTG--GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGS 301
                 + WI + + L+   GR T L    L+++D+  +D G Y C A N  G  + S  
Sbjct: 558 SDVPYNLTWIRDWRVLSASTGRVTQLADLSLEVSDIIPSDGGRYQCMASNANGVTRASMW 617

Query: 302 LTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS 361
           L V+E   ++          G   +  C+A   P+  +S  W R    +  +S  R    
Sbjct: 618 LLVREAPQVSIHTRSQHFSQGMEVSVSCSASGYPTPHIS--WSREGHALREDSRIRV--D 673

Query: 362 NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
              +L +   +  D+G Y+C+A  E+   E   TL
Sbjct: 674 AQGTLIIQGVAPEDAGNYSCQAANEVGTDEETVTL 708



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 79/206 (38%), Gaps = 8/206 (3%)

Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT 260
           N L  V    Y  V   AP ++  P+    +  + ++++C V       +    N   L 
Sbjct: 426 NPLLRVSGVSYSGVAPGAPLVSMPPRIHGYLH-QPLLVSCSVHSTLPFRLQLRRNGARLG 484

Query: 261 GGR-YTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEV 319
             R + +      +I   +  + G Y C A ++ GT +    + V +         +  V
Sbjct: 485 EERHFQVSGNSSWEIPRASKTEEGAYECTAVSRAGTGRAKAQIVVTDPPPQLVPAPNITV 544

Query: 320 EAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQY 379
             G++A   C  +SD  +  ++ W+R    +   S  R  Q  D SL V+     D G+Y
Sbjct: 545 SLGETAVLSCQVLSD--VPYNLTWIRDWRVLS-ASTGRVTQLADLSLEVSDIIPSDGGRY 601

Query: 380 TCRAQTELDFIEAQATLTVQVPLEAP 405
            C A        A   L V+   EAP
Sbjct: 602 QCMASNANGVTRASMWLLVR---EAP 624


>gi|404351643|ref|NP_001258221.1| hemicentin-1 precursor [Rattus norvegicus]
          Length = 5635

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 181/382 (47%), Gaps = 11/382 (2%)

Query: 21   ATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI-NPSDR 79
            ++ +S +   H P +   T        N +V L C+  G P P   W +D V + N   +
Sbjct: 4156 SSSMSTTLTVHVPPRIQSTEVHYTVNENSQVVLPCVADGIPTPAIHWERDSVLLANLLGK 4215

Query: 80   ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAE 139
             +   YG+ L++++V   D G+YTC  +N  GE  ++++ L+V A P FT  P  ++  +
Sbjct: 4216 YTAQPYGE-LVLENVVLEDAGTYTCVANNAAGE-DTHTVTLTVHALPTFTELPGDLSLNK 4273

Query: 140  EETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA 199
             E +   CKA G+P P++ W  N   I   P +     G + + IE + K D+G Y C A
Sbjct: 4274 GEQLRLSCKAVGIPLPKLTWTFNNNII---PAHFDSVNGHSELVIEKVSKEDSGTYVCTA 4330

Query: 200  TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL 259
             NS+G+V    +V V        + P +     G   +L C V G P P + W     ++
Sbjct: 4331 ENSVGFVKAIGFVYVKEPPVFKGDYPSNWIEPLGGNAILNCEVKGDPAPTIQWSRKGADV 4390

Query: 260  -TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYE 318
                R   L  G L I      D+G+YTC A N+ G  + S SLT++    IT +P +  
Sbjct: 4391 EISHRIRQLGNGSLAIYGTVNEDAGDYTCVAANEAGVVERSMSLTLQSSPMITLEPVETI 4450

Query: 319  VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQ 378
            V+AG   T  C A  +P  + +I W R   PI +++  R     + SL +  + + D+ +
Sbjct: 4451 VDAGGRVTLDCQAAGEP--QPTITWSRQGRPIPWDN--RLTMLPNSSLYIAAARKEDTSE 4506

Query: 379  YTCRAQTELDFIEAQATLTVQV 400
            Y C A+  +  +  +  + VQV
Sbjct: 4507 YECVARNLMGSVLVRVPVIVQV 4528



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 192/423 (45%), Gaps = 39/423 (9%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
            L ++ VELFC     P P  +W KDG P+     +S    G  L+I+  +  D G YTCE
Sbjct: 2116 LISQTVELFCQSDAVPPPTLMWFKDGRPLLKRPGLSISENGSVLMIEDAQAGDTGRYTCE 2175

Query: 106  VSNGVGEA-KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
             +N  G+  K+Y++++ V  + Y + E   + A E   +T  C++SG+P P + W   G 
Sbjct: 2176 ATNVAGKTEKNYNVNIWVPPSIYGSDELVQLTAIEGNLITLLCESSGIPPPNLTWKKKGS 2235

Query: 165  PI-SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD----VYV-----NV 214
             + + A        G  R+ I    K+D G Y C A+N  G   K+    VY+     N 
Sbjct: 2236 LVLADAAGRVHILSGGRRLQISIAEKADAGLYTCVASNVAGIAKKEYNLQVYIRPSIANS 2295

Query: 215  LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGR-YTILETGD-L 272
             +H PEIT        + G+++ L C V G P+P V W+ + + L+ G+   IL+ G  L
Sbjct: 2296 GSHRPEIT-------VIRGRSISLECEVQGIPQPTVTWMKDGRPLSKGKGVEILDEGRVL 2348

Query: 273  KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ---PEDYEVEAGQSATFRC 329
            ++ +V  +D+G Y C A N  G       L+V     I      PE+  V    S +  C
Sbjct: 2349 QLKNVHVSDTGRYVCVAVNVAGMTDKRYDLSVHVPPSIIGNHGVPENISVVEKSSVSLTC 2408

Query: 330  NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
             A   P    SI WL+   P+   S  + + S    L + ++   D+GQYTC  +     
Sbjct: 2409 EASGIP--LPSITWLKDGWPVSLGSSVKIL-SGGRMLRLMQTRPEDAGQYTCIVRNAAGE 2465

Query: 390  IEAQATLTVQVPLEAPSNFTLIQV-IDAKKAVVSWNPVSPQSLRGHFRGYKVQ--TWTEK 446
                  L+V VP     + TL  + I  K++V         +L    RG  V   TW  K
Sbjct: 2466 DRKMFGLSVLVPPHIVGDNTLEDIKIKEKQSV---------TLTCEVRGNPVPQITW-HK 2515

Query: 447  DGE 449
            DG+
Sbjct: 2516 DGQ 2518



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 153/360 (42%), Gaps = 12/360 (3%)

Query: 48   NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            N  +EL CI  G P P+  W KDG P   ++++     G  L +   +  D G YTC  S
Sbjct: 3543 NNPLELSCIASGIPAPKISWMKDGRPFLQTEQVQTLEGGAILRVSSAQVEDTGRYTCLAS 3602

Query: 108  NGVG-EAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPI 166
            +  G + K Y + + V        E +         VT ECK+  +P P I W+ NG+ +
Sbjct: 3603 SPAGDDDKEYLVRVHVPPNIAGVDEAQDFTVLRNRQVTLECKSDAVPPPVIMWLKNGEQL 3662

Query: 167  SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
             QA P  R   G   + I N    DT NY C A+N  G   ++  + V    P I+  P+
Sbjct: 3663 -QATPRVRILSGGRYLQINNADLGDTANYTCVASNIAGKTTREFILTVNV-PPSISGGPQ 3720

Query: 227  DEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL--TGGRYTILETGDLKITDVAFADSGE 284
               T+  K++ L C   G P P + W  +   L  +  RY+ILE G L I      D+G 
Sbjct: 3721 SLVTLLNKSIALECLAEGVPSPRITWRKDGVVLAESHARYSILENGFLHIQSAHITDTGR 3780

Query: 285  YTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWL 344
            Y C A N  GT +    L V     I   P +  V      T  C A   P  K SI W 
Sbjct: 3781 YLCMATNVAGTDRRRIDLQVHVPPSIAAGPTNVTVTVNVQTTLACEATGIP--KPSINWR 3838

Query: 345  RGSEPIDFESEP---RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            +    ++ +      R + S   SL +   S  D+  Y C   ++    +    LTVQVP
Sbjct: 3839 KDGHLLNVDQNQNSYRLLSSG--SLIIISPSVDDTASYECTVTSDAGEDKRTVDLTVQVP 3896



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 165/383 (43%), Gaps = 25/383 (6%)

Query: 48   NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
            N  + L C     P P   W KDG P+  SDR+     G+ L I   +  D G YTC   
Sbjct: 2792 NNPISLHCETNAAPPPTLTWYKDGRPLTSSDRVLILPGGRVLQIPRAKVEDAGRYTCVAV 2851

Query: 108  NGVGEAKSYSIDLSVLAAPYF----TVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
            N  GE  S   D+ VL  P      +  PE +     ++   EC +SG P P   W  +G
Sbjct: 2852 NEAGE-DSLQYDIHVLLPPVIKGANSDLPEEVTVLVNKSAQMECSSSGSPAPRNFWQKDG 2910

Query: 164  KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
            +P+ +   +     G   + I N + +DTG Y C A N+ G   K  Y N+  H P    
Sbjct: 2911 QPLLEDEHHKFLSDG-RVLQILNAQITDTGRYVCVAENTAGSAKK--YFNLNVHVPPSVI 2967

Query: 224  APKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD--LKITDVAF 279
             P  E+   V    + LTC V G P P++NW+ N++ +      ++  G   L+I     
Sbjct: 2968 GPNHEHLSVVVNHFISLTCEVSGFPPPDLNWLKNEQPIKPNTNVLIVPGGRTLQIIRAKV 3027

Query: 280  ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED----YEVEAGQSATFRC--NAVS 333
            +D GEYTC A N+ G ++   SLTV     I D   +      V  G S +  C  NAV 
Sbjct: 3028 SDGGEYTCVAINQAGESKKKVSLTVHVPPSIKDHGSESLSIVNVREGTSVSLECESNAVP 3087

Query: 334  DPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393
             P     I W +    I  +S    + +    L + ++   D+GQY CRA       +  
Sbjct: 3088 PP----VITWSKNGRMIP-DSSNVAILTGGQMLHIRRAEVADTGQYVCRAINVAGRDDKN 3142

Query: 394  ATLTVQVP--LEAPSNFTLIQVI 414
              L V VP  +E P    +++ +
Sbjct: 3143 FHLNVYVPPTIEGPETEVIVETM 3165



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 156/375 (41%), Gaps = 11/375 (2%)

Query: 32   APKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLII 91
            APK   V  +  VAL +  V + C   G P PQ  W K  + + PS  +S       L I
Sbjct: 701  APKLVVVQSELLVALGDTTV-MECKTSGIPPPQVKWFKGDLELRPSTFLSIDPLMGLLKI 759

Query: 92   KHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASG 151
            +  +  D G YTC  +N  G A   S+ L V + P F  EP  ++      VT  C   G
Sbjct: 760  QETQDLDAGDYTCVAANDAGRATG-SLTLDVGSPPVFIQEPSDVSMEIGSNVTLPCYVQG 818

Query: 152  LPEPEIHWVH-NGKPISQAP--PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYK 208
             PEP+I W   +  P+   P   +   ++    + I NL  SD G Y C A N  G +  
Sbjct: 819  YPEPKIKWRRLDNMPVFSKPFSVSSISQLRTGALFISNLWASDKGTYICEAENQFGKIQS 878

Query: 209  DVYVNVLAH-APEITEAPKDEYTVDGKTVVLTCRVF-GAPKPEVNWIHNQKELTGGRY-T 265
               V V    AP I  +P     ++G+ + L C +  G P PE  W+ N   L    Y T
Sbjct: 879  QTTVTVTGLVAPLIGISPSKASVIEGQPLTLPCTLLAGNPIPERRWMKNSAMLVQNPYIT 938

Query: 266  ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
            +   G L I  V   D GEYTC A N  GT   + S+ V     I    +      G   
Sbjct: 939  VRSDGSLHIERVRLQDGGEYTCVASNVAGTNNKTTSVAVHVLPTIQHGQQILSTIEGVPV 998

Query: 326  TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
            T  C A   P  K SI W +  E I      +F    D SL V      +SG+Y C A  
Sbjct: 999  TLPCRASGIP--KPSITWSKKGELIS-TGNAKFSAGADGSLYVVSPGSEESGEYICTATN 1055

Query: 386  ELDFIEAQATLTVQV 400
               + + +  LTV V
Sbjct: 1056 AAGYAKRKVQLTVYV 1070



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 215/505 (42%), Gaps = 31/505 (6%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
            L N+   L+C   GTP P  +W KD + +  S  +   N GK L +      D G Y+C+
Sbjct: 1373 LVNQLASLYCEVEGTPSPVIMWYKDDIQVTESSTVQIVNNGKILKLFKASAEDTGRYSCK 1432

Query: 106  VSNGVGEA-KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
              N  G + K +S+++ V  +      P  ++      +T +C   G P P IHW  +GK
Sbjct: 1433 AINIAGTSQKDFSVNVLVPPSIQGAGSPNEVSVVLNHNITLQCPVRGTPFPAIHWFKDGK 1492

Query: 165  PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT-- 222
            P+    PN         + + N R+SD G Y C+ +N+ G   KD+ + +    P I   
Sbjct: 1493 PLFLGDPNIELSDRGQNLHLRNARRSDKGRYQCSVSNAAGKQAKDIKLTLYV-PPSIKGG 1551

Query: 223  EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI-LETGD-LKITDVAFA 280
                +   +    V L C   G P P + W  + + +T     + ++ G  L I     +
Sbjct: 1552 NVTTEISALLNSVVKLECETRGLPVPAITWYKDGQVVTSSSQALYIDKGQFLHIPRAQVS 1611

Query: 281  DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ---PEDYEVEAGQSATFRCNAVSDPSL 337
            DS  YTC A N  GTA+ S  + +     I      P   +V  GQS    C AV +P  
Sbjct: 1612 DSATYTCHASNVAGTAEKSFHVDIYVPPIIEGDLTTPSSKQVVVGQSLVLECKAVGNPPP 1671

Query: 338  KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
             L+  WL+   P+   S+   +++    L +  + E+D GQY C A +     E +  + 
Sbjct: 1672 VLT--WLKDGVPVK-ASDNIHIEAGGKKLEILSALEVDRGQYICVATSVAGEREIKYEVD 1728

Query: 398  VQVPL-----EAPSNFTLI--QVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG 450
            V VP      +  S F ++   +++    V    P +   L+G       Q   E+DG  
Sbjct: 1729 VLVPPAVEGGDETSYFIVLANNLLELDCQVSGSPPPTIMWLKGG------QLIDERDGFK 1782

Query: 451  ---SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV 507
               S R+L++ + + + T + + V  +    R   F    + PP+ I S   PE      
Sbjct: 1783 ILLSGRKLVIAQAQVSDTGLYQCVATNVAGDRRKEFEVTVHVPPT-IKSSDLPEKTVVRY 1841

Query: 508  Q--SLEAIPLGSSAFYLKWVKPEQP 530
            +  SL+ I  G     + W+K +QP
Sbjct: 1842 KPVSLQCIANGIPNPSITWLKDDQP 1866



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 177/426 (41%), Gaps = 26/426 (6%)

Query: 44   VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
            V L NK + L C+  G P P+  W KDGV +  S           L I+    +D G Y 
Sbjct: 3723 VTLLNKSIALECLAEGVPSPRITWRKDGVVLAESHARYSILENGFLHIQSAHITDTGRYL 3782

Query: 104  CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
            C  +N  G  +   IDL V   P     P  +        T  C+A+G+P+P I+W  +G
Sbjct: 3783 CMATNVAGTDRR-RIDLQVHVPPSIAAGPTNVTVTVNVQTTLACEATGIPKPSINWRKDG 3841

Query: 164  KPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
              ++     N  R +    + I +    DT +Y C  T+  G   + V + V    P I 
Sbjct: 3842 HLLNVDQNQNSYRLLSSGSLIIISPSVDDTASYECTVTSDAGEDKRTVDLTVQV-PPTIA 3900

Query: 223  EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT--GGRYTILETGDLKITDVAFA 280
            + P D         V+TC   G P P ++W  N   L   G  Y IL +G ++I+     
Sbjct: 3901 DEPMDFLVTRQAPAVMTCSASGVPLPSIHWTKNGIRLLPRGDGYRILSSGAIEISAAQLN 3960

Query: 281  DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
             +G YTC ARN  G+     +L V+E   I  QP + +V         C A   P+    
Sbjct: 3961 HAGRYTCIARNAAGSVHRHVTLRVQEPPFIQPQPSELDVILNNPILLPCEATGIPT--PF 4018

Query: 341  IVWLRGSEPID-FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            I W +  E I+   S          SL ++++ + D+G Y C AQ        +  L VQ
Sbjct: 4019 ITWQK--EGINVITSGKSLAVLPSGSLQISRAVQGDAGTYMCVAQNPAGTALGKIKLNVQ 4076

Query: 400  VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ--TWTEKDGEG---SIRE 454
            VP    S+         K+ VV+ +   P SL     G      TW  KDG     SIR+
Sbjct: 4077 VPPAISSH--------QKEYVVTMD--KPVSLLCETEGSPPPDITW-HKDGHALTESIRQ 4125

Query: 455  LIVNKG 460
             I+N G
Sbjct: 4126 RILNSG 4131



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 169/377 (44%), Gaps = 22/377 (5%)

Query: 38   VTRKKEVALRNKKVELFC-IFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEF 96
            ++  K   +  + + L C +  G P+P+  W K+   +  +  I+  + G SL I+ V  
Sbjct: 894  ISPSKASVIEGQPLTLPCTLLAGNPIPERRWMKNSAMLVQNPYITVRSDG-SLHIERVRL 952

Query: 97   SDQGSYTCEVSNGVG-EAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEP 155
             D G YTC  SN  G   K+ S+ + VL  P      + ++  E   VT  C+ASG+P+P
Sbjct: 953  QDGGEYTCVASNVAGTNNKTTSVAVHVL--PTIQHGQQILSTIEGVPVTLPCRASGIPKP 1010

Query: 156  EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
             I W   G+ IS    N +   G +  + + +    ++G Y C ATN+ GY  + V + V
Sbjct: 1011 SITWSKKGELISTG--NAKFSAGADGSLYVVSPGSEESGEYICTATNAAGYAKRKVQLTV 1068

Query: 215  LAHAPEI--------TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT--GGRY 264
                P +         + P +   + G+   L C     P P + W  + + ++    R+
Sbjct: 1069 YVR-PRVFGDQRGLSQDKPVEISVLAGEEATLPCEAKSLPPPIITWAKDSQLISPFSPRH 1127

Query: 265  TILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
            T L +G +KIT+   +DSG Y C A N  G    S  L+V     I       +V+ GQ 
Sbjct: 1128 TFLPSGSMKITETRISDSGMYLCVATNIAGNVTQSVKLSVHVPPKIQHGNRHLKVQVGQR 1187

Query: 325  ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
                CNA   P     I W +   P+ F    +   S D  LT+ +++  D+G YTC A 
Sbjct: 1188 VDIPCNAHGSP--PPVITWFKSGRPMPFNGV-QHPGSPDGMLTIEQTTLSDAGTYTCTAT 1244

Query: 385  TELDFIEAQATLTVQVP 401
                  EA+ TL VQ P
Sbjct: 1245 NIAGSDEAEVTLHVQEP 1261



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 152/345 (44%), Gaps = 9/345 (2%)

Query: 44   VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
            + L N  +EL C   G+P P  +W K G  I+  D       G+ L+I   + SD G Y 
Sbjct: 1745 IVLANNLLELDCQVSGSPPPTIMWLKGGQLIDERDGFKILLSGRKLVIAQAQVSDTGLYQ 1804

Query: 104  CEVSNGVGEA-KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
            C  +N  G+  K + + + V      +  PE       + V+ +C A+G+P P I W+ +
Sbjct: 1805 CVATNVAGDRRKEFEVTVHVPPTIKSSDLPEK-TVVRYKPVSLQCIANGIPNPSITWLKD 1863

Query: 163  GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
             +P++ AP N R +     + I      D G Y C ATN+ G  ++   ++V    P + 
Sbjct: 1864 DQPVNTAPGNLRIQSSGRVLQIAKALLEDAGRYTCVATNAAGEAHQHTQLHV-HEPPSLD 1922

Query: 223  EAPK--DEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGD-LKITDVA 278
            +  K  +E  V    + L C+  G+P P + W  +   L G    T L+ G  L+I    
Sbjct: 1923 DGGKMLNESVVVNNPIQLECKATGSPVPVLTWYKDSHPLAGSTSATFLKRGQILEIGSAQ 1982

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
             +D+G Y C A N  G  +   SL V     I+      EV     A   C A   P+  
Sbjct: 1983 ISDAGIYKCVAINSAGATELFYSLQVHVPPSISGSSSMVEVVVNNLARLECEARGIPAPS 2042

Query: 339  LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            L+  WL+   P+   S    V S    L +T +   D+G+YTC A
Sbjct: 2043 LT--WLKDGSPVSSFSNGIQVLSGGRILALTSAQMSDTGRYTCVA 2085



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 173/414 (41%), Gaps = 39/414 (9%)

Query: 16   LLNVIATGISASQNRHAPKQQYVTRK------KEVALR------------------NKKV 51
            +L+  A  ISA+Q  HA +   + R       + V LR                  N  +
Sbjct: 3946 ILSSGAIEISAAQLNHAGRYTCIARNAAGSVHRHVTLRVQEPPFIQPQPSELDVILNNPI 4005

Query: 52   ELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVG 111
             L C   G P P   W K+G+ +  S +        SL I      D G+Y C   N  G
Sbjct: 4006 LLPCEATGIPTPFITWQKEGINVITSGKSLAVLPSGSLQISRAVQGDAGTYMCVAQNPAG 4065

Query: 112  EAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
             A    I L+V   P  +   +      ++ V+  C+  G P P+I W  +G  ++++  
Sbjct: 4066 TALG-KIKLNVQVPPAISSHQKEYVVTMDKPVSLLCETEGSPPPDITWHKDGHALTES-- 4122

Query: 172  NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
              +R +    + I   +  D G Y C A N  G       + V  H P   ++ +  YTV
Sbjct: 4123 IRQRILNSGALQIAFAQPDDAGQYTCMAANMAGSSSMSTTLTV--HVPPRIQSTEVHYTV 4180

Query: 232  DGKT-VVLTCRVFGAPKPEVNWIHNQKELTG--GRYTILETGDLKITDVAFADSGEYTCF 288
            +  + VVL C   G P P ++W  +   L    G+YT    G+L + +V   D+G YTC 
Sbjct: 4181 NENSQVVLPCVADGIPTPAIHWERDSVLLANLLGKYTAQPYGELVLENVVLEDAGTYTCV 4240

Query: 289  ARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
            A N  G    + +LTV      T+ P D  +  G+     C AV  P  KL+  +     
Sbjct: 4241 ANNAAGEDTHTVTLTVHALPTFTELPGDLSLNKGEQLRLSCKAVGIPLPKLTWTFNNNII 4300

Query: 349  PIDFESEPRFVQSNDYS-LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            P  F+S       N +S L + K S+ DSG Y C A+  + F++A   + V+ P
Sbjct: 4301 PAHFDS------VNGHSELVIEKVSKEDSGTYVCTAENSVGFVKAIGFVYVKEP 4348



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 169/383 (44%), Gaps = 22/383 (5%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPI--NPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
            L  + VEL C   G P+P+  W +DG PI    ++R+     G +L I     SD G YT
Sbjct: 3259 LLGENVELVCDADGIPIPRLQWLRDGKPIVSGETERVRVTTDGSTLNIYRALTSDMGKYT 3318

Query: 104  CEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKASGLPEPEIHWV 160
            C  +N  GE      +L+V   P       E E + A  + ++  ECKA+G P P+I W+
Sbjct: 3319 CVATNPAGEEDRI-FNLNVYVPPKIRGNKEEAEKLMALVDTSLNIECKATGTPPPQISWL 3377

Query: 161  HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
             NG P+  +  + R       I I   + SD   Y C A+N  G   K   + V    P 
Sbjct: 3378 KNGLPLPIS-SHIRLLSAGQAIRIVRAQVSDVAVYTCVASNRAGIDSKRYSLQVFV-PPN 3435

Query: 221  ITEAPKDE--YTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD--LKITD 276
            +  A   E    V G +  +TC   GAP P ++W+ + + L    +  + T    L++  
Sbjct: 3436 MDNAMGTEEITLVKGSSTSMTCFTDGAPTPSMSWLRDGQPLALDAHLTIGTQGMVLQLIK 3495

Query: 277  VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSD 334
                D+G+YTC A N+ G       L V E  HI  ++ P +  V         C A   
Sbjct: 3496 ADTEDTGKYTCVASNEAGEVSKHFVLKVLEPPHINGSEGPGEVSVIVNNPLELSCIASGI 3555

Query: 335  PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
            P+ K+S  W++   P   ++E          L V+ +   D+G+YTC A +     + + 
Sbjct: 3556 PAPKIS--WMKDGRPF-LQTEQVQTLEGGAILRVSSAQVEDTGRYTCLASSPAGDDDKEY 3612

Query: 395  TLTVQVP-----LEAPSNFTLIQ 412
             + V VP     ++   +FT+++
Sbjct: 3613 LVRVHVPPNIAGVDEAQDFTVLR 3635



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 166/370 (44%), Gaps = 16/370 (4%)

Query: 41   KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQG 100
            +K +AL +  + + C   GTP PQ  W K+G+P+  S  I   + G+++ I   + SD  
Sbjct: 3350 EKLMALVDTSLNIECKATGTPPPQISWLKNGLPLPISSHIRLLSAGQAIRIVRAQVSDVA 3409

Query: 101  SYTCEVSNGVG-EAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHW 159
             YTC  SN  G ++K YS+ + V       +  E I   +  + +  C   G P P + W
Sbjct: 3410 VYTCVASNRAGIDSKRYSLQVFVPPNMDNAMGTEEITLVKGSSTSMTCFTDGAPTPSMSW 3469

Query: 160  VHNGKPISQAPPNPRRKVGPNRITIENLRKS--DTGNYGCNATNSLGYVYKDVYVNVLAH 217
            + +G+P++    +    +G   + ++ ++    DTG Y C A+N  G V K   + VL  
Sbjct: 3470 LRDGQPLAL---DAHLTIGTQGMVLQLIKADTEDTGKYTCVASNEAGEVSKHFVLKVL-E 3525

Query: 218  APEI--TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE-LTGGRYTILETGD-LK 273
             P I  +E P +   +    + L+C   G P P+++W+ + +  L   +   LE G  L+
Sbjct: 3526 PPHINGSEGPGEVSVIVNNPLELSCIASGIPAPKISWMKDGRPFLQTEQVQTLEGGAILR 3585

Query: 274  ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNA 331
            ++     D+G YTC A +  G       + V    +I   D+ +D+ V   +  T  C  
Sbjct: 3586 VSSAQVEDTGRYTCLASSPAGDDDKEYLVRVHVPPNIAGVDEAQDFTVLRNRQVTLECK- 3644

Query: 332  VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
             SD      I+WL+  E +      R +    Y L +  +   D+  YTC A        
Sbjct: 3645 -SDAVPPPVIMWLKNGEQLQATPRVRILSGGRY-LQINNADLGDTANYTCVASNIAGKTT 3702

Query: 392  AQATLTVQVP 401
             +  LTV VP
Sbjct: 3703 REFILTVNVP 3712



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 165/384 (42%), Gaps = 27/384 (7%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
            L NK  ++ C   G+P P+  W KDG P+   +     + G+ L I + + +D G Y C 
Sbjct: 2885 LVNKSAQMECSSSGSPAPRNFWQKDGQPLLEDEHHKFLSDGRVLQILNAQITDTGRYVCV 2944

Query: 106  VSNGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNG 163
              N  G AK Y  +L+V   P   + P  E ++      ++  C+ SG P P+++W+ N 
Sbjct: 2945 AENTAGSAKKY-FNLNVHVPPSV-IGPNHEHLSVVVNHFISLTCEVSGFPPPDLNWLKNE 3002

Query: 164  KPISQAPPNPRRKVGPNRITIENLRK--SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
            +PI    PN    + P   T++ +R   SD G Y C A N  G   K V + V    P I
Sbjct: 3003 QPIK---PNTNVLIVPGGRTLQIIRAKVSDGGEYTCVAINQAGESKKKVSLTVHV-PPSI 3058

Query: 222  TEAPKDEYTV----DGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD--LKIT 275
             +   +  ++    +G +V L C     P P + W  N + +       + TG   L I 
Sbjct: 3059 KDHGSESLSIVNVREGTSVSLECESNAVPPPVITWSKNGRMIPDSSNVAILTGGQMLHIR 3118

Query: 276  DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA-GQSATFRCNAVSD 334
                AD+G+Y C A N  G    +  L V     I     +  VE      T  C+A   
Sbjct: 3119 RAEVADTGQYVCRAINVAGRDDKNFHLNVYVPPTIEGPETEVIVETMSNPVTLTCDATGI 3178

Query: 335  PSLKLSIVWLRGSEPIDFESEP--RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
            P    +I WL+  +PI+  S+P    + S    L + +    + G YTC A       + 
Sbjct: 3179 P--PPTITWLKNHKPIE-NSDPLEAHILSGGSKLQIARLQRSNRGNYTCVASNMEGKAQK 3235

Query: 393  QATLTVQVP-----LEAPSNFTLI 411
               L++QVP      E PS  +++
Sbjct: 3236 NYILSIQVPPSVAGAEVPSEVSVL 3259



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 140/527 (26%), Positives = 215/527 (40%), Gaps = 50/527 (9%)

Query: 45   ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
            AL N  V+L C   G P+P   W KDG  +  S +    + G+ L I   + SD  +YTC
Sbjct: 1559 ALLNSVVKLECETRGLPVPAITWYKDGQVVTSSSQALYIDKGQFLHIPRAQVSDSATYTC 1618

Query: 105  EVSNGVGEA-KSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKASGLPEPEIHWV 160
              SN  G A KS+ +D+ V   P        P        +++  ECKA G P P + W+
Sbjct: 1619 HASNVAGTAEKSFHVDIYV--PPIIEGDLTTPSSKQVVVGQSLVLECKAVGNPPPVLTWL 1676

Query: 161  HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
             +G P+ +A  N   + G  ++ I +  + D G Y C AT+  G       V+VL   P 
Sbjct: 1677 KDGVPV-KASDNIHIEAGGKKLEILSALEVDRGQYICVATSVAGEREIKYEVDVLV-PPA 1734

Query: 221  ITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT--GGRYTILETGDLKITD 276
            +    +  Y   +    + L C+V G+P P + W+   + +    G   +L    L I  
Sbjct: 1735 VEGGDETSYFIVLANNLLELDCQVSGSPPPTIMWLKGGQLIDERDGFKILLSGRKLVIAQ 1794

Query: 277  VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRC--NAV 332
               +D+G Y C A N  G  +    +TV     I  +D PE   V   +  + +C  N +
Sbjct: 1795 AQVSDTGLYQCVATNVAGDRRKEFEVTVHVPPTIKSSDLPEKTVVRY-KPVSLQCIANGI 1853

Query: 333  SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
             +P    SI WL+  +P++       +QS+   L + K+   D+G+YTC A         
Sbjct: 1854 PNP----SITWLKDDQPVNTAPGNLRIQSSGRVLQIAKALLEDAGRYTCVATNAAGEAHQ 1909

Query: 393  QATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE--- 449
               L V  P        ++      ++VV  NP+  +  +       V TW  KD     
Sbjct: 1910 HTQLHVHEPPSLDDGGKML-----NESVVVNNPIQLEC-KATGSPVPVLTWY-KDSHPLA 1962

Query: 450  GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA----------YNGPPSEIISFVT 499
            GS     + +G+    E+     +     + +A N A           + PPS   S   
Sbjct: 1963 GSTSATFLKRGQ--ILEIGSAQISDAGIYKCVAINSAGATELFYSLQVHVPPSISGSSSM 2020

Query: 500  PEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP-----NG--VLMGYKI 539
             E V   +  LE    G  A  L W+K   P     NG  VL G +I
Sbjct: 2021 VEVVVNNLARLECEARGIPAPSLTWLKDGSPVSSFSNGIQVLSGGRI 2067



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 154/350 (44%), Gaps = 26/350 (7%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
           SL ++ V+  D G Y C VS+  G A + S+ L+V   P  TV P   +      V+  C
Sbjct: 575 SLELRSVKIGDAGEYRCVVSSEGGSAAA-SVFLTVQEKPKVTVMPRNQSFTGGSEVSIMC 633

Query: 148 KASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVY 207
            A+G P+P+I W  N   I  +  +  R      + I+N    D G Y C A+N  G   
Sbjct: 634 SATGYPKPKIVWTINEMFILGS--HRYRMTAEGTLFIKNAVPKDAGTYSCLASNEAG--- 688

Query: 208 KDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
            D   + L +  AP++     +     G T V+ C+  G P P+V W     EL    + 
Sbjct: 689 TDEQTSTLRYIEAPKLVVVQSELLVALGDTTVMECKTSGIPPPQVKWFKGDLELRPSTFL 748

Query: 266 ILE--TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQ 323
            ++   G LKI +    D+G+YTC A N  G A GS +L V        +P D  +E G 
Sbjct: 749 SIDPLMGLLKIQETQDLDAGDYTCVAANDAGRATGSLTLDVGSPPVFIQEPSDVSMEIGS 808

Query: 324 SATFRCNAVSDPSLKLSIVWLR------GSEPIDFESEPRFVQSNDYSLTVTKSSELDSG 377
           + T  C     P  K  I W R       S+P    S     Q    +L ++     D G
Sbjct: 809 NVTLPCYVQGYPEPK--IKWRRLDNMPVFSKPFSVSS---ISQLRTGALFISNLWASDKG 863

Query: 378 QYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVS 427
            Y C A+ +   I++Q T+TV   L AP    LI +  +K +V+   P++
Sbjct: 864 TYICEAENQFGKIQSQTTVTV-TGLVAP----LIGISPSKASVIEGQPLT 908



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 161/389 (41%), Gaps = 34/389 (8%)

Query: 42   KEVALRNKKVELFCIFGGTPLPQTIWSKDGVPIN--PSDRISQGNYGKSLIIKHVEFSDQ 99
            ++  +R K V L CI  G P P   W KD  P+N  P +   Q + G+ L I      D 
Sbjct: 1835 EKTVVRYKPVSLQCIANGIPNPSITWLKDDQPVNTAPGNLRIQSS-GRVLQIAKALLEDA 1893

Query: 100  GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFIN--AAEEETVTFECKASGLPEPEI 157
            G YTC  +N  GEA  ++  L V   P      + +N        +  ECKA+G P P +
Sbjct: 1894 GRYTCVATNAAGEAHQHT-QLHVHEPPSLDDGGKMLNESVVVNNPIQLECKATGSPVPVL 1952

Query: 158  HWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAH 217
             W  +  P++ +      K G   + I + + SD G Y C A NS G    +++ ++  H
Sbjct: 1953 TWYKDSHPLAGSTSATFLKRG-QILEIGSAQISDAGIYKCVAINSAGAT--ELFYSLQVH 2009

Query: 218  A-PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ----------KELTGGRYTI 266
              P I+ +      V      L C   G P P + W+ +           + L+GGR   
Sbjct: 2010 VPPSISGSSSMVEVVVNNLARLECEARGIPAPSLTWLKDGSPVSSFSNGIQVLSGGRI-- 2067

Query: 267  LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
                 L +T    +D+G YTC A N  G  Q    L V    +I  + ++  V   Q+  
Sbjct: 2068 -----LALTSAQMSDTGRYTCVAVNAAGEKQRDFDLRVYAPPNIMGEEQNVSVLISQTVE 2122

Query: 327  FRC--NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
              C  +AV  P+L    +W +   P+  +     +  N   L +  +   D+G+YTC A 
Sbjct: 2123 LFCQSDAVPPPTL----MWFKDGRPL-LKRPGLSISENGSVLMIEDAQAGDTGRYTCEAT 2177

Query: 385  TELDFIEAQATLTVQVPLEAPSNFTLIQV 413
                  E    + + VP     +  L+Q+
Sbjct: 2178 NVAGKTEKNYNVNIWVPPSIYGSDELVQL 2206



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 161/364 (44%), Gaps = 19/364 (5%)

Query: 51   VELFCIFGGTPLPQTIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFSDQGSYTCEVSN 108
            V L C   G P P   W K+  PI  SD +     + G  L I  ++ S++G+YTC  SN
Sbjct: 3169 VTLTCDATGIPPPTITWLKNHKPIENSDPLEAHILSGGSKLQIARLQRSNRGNYTCVASN 3228

Query: 109  GVGEA-KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPIS 167
              G+A K+Y + + V  +      P  ++    E V   C A G+P P + W+ +GKPI 
Sbjct: 3229 MEGKAQKNYILSIQVPPSVAGAEVPSEVSVLLGENVELVCDADGIPIPRLQWLRDGKPIV 3288

Query: 168  QAPPNPRRKVGPNRITIENLRK--SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT--- 222
                  R +V  +  T+   R   SD G Y C ATN  G   +   +NV    P+I    
Sbjct: 3289 SG-ETERVRVTTDGSTLNIYRALTSDMGKYTCVATNPAGEEDRIFNLNVYV-PPKIRGNK 3346

Query: 223  -EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGD-LKITDVAF 279
             EA K    VD  ++ + C+  G P P+++W+ N   L       +L  G  ++I     
Sbjct: 3347 EEAEKLMALVD-TSLNIECKATGTPPPQISWLKNGLPLPISSHIRLLSAGQAIRIVRAQV 3405

Query: 280  ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ--PEDYEVEAGQSATFRCNAVSDPSL 337
            +D   YTC A N+ G      SL V    ++ +    E+  +  G S +  C     P+ 
Sbjct: 3406 SDVAVYTCVASNRAGIDSKRYSLQVFVPPNMDNAMGTEEITLVKGSSTSMTCFTDGAPTP 3465

Query: 338  KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
             +S  WLR  +P+  ++    + +    L + K+   D+G+YTC A  E   +     L 
Sbjct: 3466 SMS--WLRDGQPLALDAH-LTIGTQGMVLQLIKADTEDTGKYTCVASNEAGEVSKHFVLK 3522

Query: 398  VQVP 401
            V  P
Sbjct: 3523 VLEP 3526



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 151/363 (41%), Gaps = 9/363 (2%)

Query: 43   EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
            E  + N  ++L C   G+P+P   W KD  P+  S   +    G+ L I   + SD G Y
Sbjct: 1930 ESVVVNNPIQLECKATGSPVPVLTWYKDSHPLAGSTSATFLKRGQILEIGSAQISDAGIY 1989

Query: 103  TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
             C   N  G  + +   L V   P  +     +          EC+A G+P P + W+ +
Sbjct: 1990 KCVAINSAGATELF-YSLQVHVPPSISGSSSMVEVVVNNLARLECEARGIPAPSLTWLKD 2048

Query: 163  GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
            G P+S      +   G   + + + + SDTG Y C A N+ G   +D  + V A  P I 
Sbjct: 2049 GSPVSSFSNGIQVLSGGRILALTSAQMSDTGRYTCVAVNAAGEKQRDFDLRVYA-PPNIM 2107

Query: 223  EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGD-LKITDVAFA 280
               ++   +  +TV L C+    P P + W  + + L      +I E G  L I D    
Sbjct: 2108 GEEQNVSVLISQTVELFCQSDAVPPPTLMWFKDGRPLLKRPGLSISENGSVLMIEDAQAG 2167

Query: 281  DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA--GQSATFRCNAVSDPSLK 338
            D+G YTC A N  G  + + ++ +     I    E  ++ A  G   T  C +   P   
Sbjct: 2168 DTGRYTCEATNVAGKTEKNYNVNIWVPPSIYGSDELVQLTAIEGNLITLLCESSGIPPPN 2227

Query: 339  LSIVWLRGSEPIDFESEPRF-VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
            L+  W +    +  ++  R  + S    L ++ + + D+G YTC A       + +  L 
Sbjct: 2228 LT--WKKKGSLVLADAAGRVHILSGGRRLQISIAEKADAGLYTCVASNVAGIAKKEYNLQ 2285

Query: 398  VQV 400
            V +
Sbjct: 2286 VYI 2288



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 122/483 (25%), Positives = 199/483 (41%), Gaps = 47/483 (9%)

Query: 7    SEYKIGNRILLNVIATGISASQNRHA-------PKQQYVTRKKEVALRNKKVELFCIFGG 59
            +E +I +  +   +AT I+ +  +         PK Q+  R  +V +  ++V++ C   G
Sbjct: 1138 TETRISDSGMYLCVATNIAGNVTQSVKLSVHVPPKIQHGNRHLKVQV-GQRVDIPCNAHG 1196

Query: 60   TPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSID 119
            +P P   W K G P+  +     G+    L I+    SD G+YTC  +N  G  ++  + 
Sbjct: 1197 SPPPVITWFKSGRPMPFNGVQHPGSPDGMLTIEQTTLSDAGTYTCTATNIAGSDEA-EVT 1255

Query: 120  LSVLAAPYF-TVEPEFINAAEE----ETVTFECKASGLPEPEIHWVHNGKPISQAPPNPR 174
            L V   P    ++P F    +E    + + F C A G P+P I W+HNGK ++   P   
Sbjct: 1256 LHVQEPPTVEDLQPPFNTPFQERLANQRMAFPCPAKGTPKPTIKWLHNGKEVTGQEPGVS 1315

Query: 175  RKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK 234
                   + I ++   + G Y C A N  G   +    N+  H P +    KD+  V   
Sbjct: 1316 ILEDGALLVIASVTPLNNGEYICVAVNEAGTTERK--YNLRVHVPPVI---KDKEHVSNV 1370

Query: 235  TVV------LTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGD-LKITDVAFADSGEYT 286
            +V+      L C V G P P + W  +  ++T      I+  G  LK+   +  D+G Y+
Sbjct: 1371 SVLVNQLASLYCEVEGTPSPVIMWYKDDIQVTESSTVQIVNNGKILKLFKASAEDTGRYS 1430

Query: 287  CFARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWL 344
            C A N  GT+Q   S+ V     I     P +  V    + T +C     P    +I W 
Sbjct: 1431 CKAINIAGTSQKDFSVNVLVPPSIQGAGSPNEVSVVLNHNITLQCPVRGTPF--PAIHWF 1488

Query: 345  RGSEPIDFESEPRFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE 403
            +  +P+ F  +P    S+   +L +  +   D G+Y C              LT+ VP  
Sbjct: 1489 KDGKPL-FLGDPNIELSDRGQNLHLRNARRSDKGRYQCSVSNAAGKQAKDIKLTLYVPPS 1547

Query: 404  APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ--TWTEKDGE---GSIRELIVN 458
                    ++     +VV         L    RG  V   TW  KDG+    S + L ++
Sbjct: 1548 IKGGNVTTEISALLNSVV--------KLECETRGLPVPAITWY-KDGQVVTSSSQALYID 1598

Query: 459  KGE 461
            KG+
Sbjct: 1599 KGQ 1601



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 156/382 (40%), Gaps = 30/382 (7%)

Query: 42   KEVALR-NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQG 100
            KEV +R N  + L C     P     W KDG P+     ++    G +L IK  + SD G
Sbjct: 2682 KEVKIRVNSSLTLECEAYAIPSASLRWYKDGQPLKSDHHVNIAENGHTLQIKEAQISDTG 2741

Query: 101  SYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAE------------EETVTFECK 148
             YTC  SN  GE +    D+++   P F    E  N  +               ++  C+
Sbjct: 2742 RYTCVASNLAGEDE-LDFDVNIQVPPSFQKLWEIGNMLDTGRSGEAKDVIINNPISLHCE 2800

Query: 149  ASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR--ITIENLRKSDTGNYGCNATNSLGYV 206
             +  P P + W  +G+P++ +    R  + P    + I   +  D G Y C A N  G  
Sbjct: 2801 TNAAPPPTLTWYKDGRPLTSS---DRVLILPGGRVLQIPRAKVEDAGRYTCVAVNEAGED 2857

Query: 207  YKDVYVNVLAHAPEI----TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN-QKELTG 261
                 ++VL   P I    ++ P++   +  K+  + C   G+P P   W  + Q  L  
Sbjct: 2858 SLQYDIHVLL-PPVIKGANSDLPEEVTVLVNKSAQMECSSSGSPAPRNFWQKDGQPLLED 2916

Query: 262  GRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK-EHTHITDQPEDYEV 319
              +  L  G  L+I +    D+G Y C A N  G+A+   +L V    + I    E   V
Sbjct: 2917 EHHKFLSDGRVLQILNAQITDTGRYVCVAENTAGSAKKYFNLNVHVPPSVIGPNHEHLSV 2976

Query: 320  EAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQY 379
                  +  C     P   L+  WL+  +PI   +    V     +L + ++   D G+Y
Sbjct: 2977 VVNHFISLTCEVSGFPPPDLN--WLKNEQPIKPNTNVLIVPGG-RTLQIIRAKVSDGGEY 3033

Query: 380  TCRAQTELDFIEAQATLTVQVP 401
            TC A  +    + + +LTV VP
Sbjct: 3034 TCVAINQAGESKKKVSLTVHVP 3055



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/324 (23%), Positives = 132/324 (40%), Gaps = 15/324 (4%)

Query: 94  VEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP 153
           V  SD+G Y C   N  G  ++ +    V   P     P  +     E     C      
Sbjct: 489 VTLSDEGFYECIAMNSAGTGRAQTF-FDVSEPPPIIQVPNNVTVTPGERAVLACLVISAV 547

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
           +  + W  +G+ +  A     R +    + + +++  D G Y C  ++  G     V++ 
Sbjct: 548 DYNLTWQRSGRDVRLADSARIRTLANLSLELRSVKIGDAGEYRCVVSSEGGSAAASVFLT 607

Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDL 272
           V    P++T  P+++    G  V + C   G PKP++ W  N+  + G  RY +   G L
Sbjct: 608 V-QEKPKVTVMPRNQSFTGGSEVSIMCSATGYPKPKIVWTINEMFILGSHRYRMTAEGTL 666

Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV 332
            I +    D+G Y+C A N+ GT + + +L   E   +     +  V  G +    C   
Sbjct: 667 FIKNAVPKDAGTYSCLASNEAGTDEQTSTLRYIEAPKLVVVQSELLVALGDTTVMECKTS 726

Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSND---YSLTVTKSSELDSGQYTCRAQTELDF 389
             P  ++   W +G    D E  P    S D     L + ++ +LD+G YTC A  +   
Sbjct: 727 GIPPPQVK--WFKG----DLELRPSTFLSIDPLMGLLKIQETQDLDAGDYTCVAANDAGR 780

Query: 390 IEAQATLTVQVP---LEAPSNFTL 410
                TL V  P   ++ PS+ ++
Sbjct: 781 ATGSLTLDVGSPPVFIQEPSDVSM 804



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/391 (25%), Positives = 161/391 (41%), Gaps = 40/391 (10%)

Query: 42   KEVALRNKK-VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQG 100
            +++ ++ K+ V L C   G P+PQ  W KDG  +   +     + G+ L I + + S  G
Sbjct: 2487 EDIKIKEKQSVTLTCEVRGNPVPQITWHKDGQLLQEDEVHHMMSGGRFLQITNAQVSHTG 2546

Query: 101  SYTCEVSNGVGEAKSYSIDLSVLAAPYFT-----VEPEFINAAEEETVTFECKASGLPEP 155
             YTC  SN  G+ KS S  L+V  +P          PE +        +  C+A   P  
Sbjct: 2547 RYTCLASNIAGD-KSKSFSLNVFVSPTIAGVDSDGSPEDVIVILNSPTSLVCEAYSYPPA 2605

Query: 156  EIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVL 215
             I W  +G P+ ++  N R   G   + I N ++ + G Y C ATN  G + K   V V 
Sbjct: 2606 TITWFKDGAPL-ESSRNLRILPGGRTLQILNAQEDNAGRYSCVATNEAGEMIKHYEVKV- 2663

Query: 216  AHAPEITE---------APKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT- 265
             + P I +         +PK+       ++ L C  +  P   + W  + + L    +  
Sbjct: 2664 -YIPPIIKKGDLLGTGLSPKEVKIRVNSSLTLECEAYAIPSASLRWYKDGQPLKSDHHVN 2722

Query: 266  ILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK---------EHTHITD--- 312
            I E G  L+I +   +D+G YTC A N  G  +    + ++         E  ++ D   
Sbjct: 2723 IAENGHTLQIKEAQISDTGRYTCVASNLAGEDELDFDVNIQVPPSFQKLWEIGNMLDTGR 2782

Query: 313  QPEDYEVEAGQSATFRC--NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTK 370
              E  +V      +  C  NA   P+L     W +   P+   S+   +      L + +
Sbjct: 2783 SGEAKDVIINNPISLHCETNAAPPPTL----TWYKDGRPLT-SSDRVLILPGGRVLQIPR 2837

Query: 371  SSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            +   D+G+YTC A  E      Q  + V +P
Sbjct: 2838 AKVEDAGRYTCVAVNEAGEDSLQYDIHVLLP 2868



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 114/269 (42%), Gaps = 20/269 (7%)

Query: 47   RNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
            + +++ L C   G PLP+  W+ +   I P+   S   + + L+I+ V   D G+Y C  
Sbjct: 4273 KGEQLRLSCKAVGIPLPKLTWTFNN-NIIPAHFDSVNGHSE-LVIEKVSKEDSGTYVCTA 4330

Query: 107  SNGVGEAKSYSIDLSVLAAPYFT-------VEPEFINAAEEETVTFECKASGLPEPEIHW 159
             N VG  K+    + V   P F        +EP   NA         C+  G P P I W
Sbjct: 4331 ENSVGFVKAIGF-VYVKEPPVFKGDYPSNWIEPLGGNA------ILNCEVKGDPAPTIQW 4383

Query: 160  VHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
               G  +  +  +  R++G   + I      D G+Y C A N  G V + + +  L  +P
Sbjct: 4384 SRKGADVEIS--HRIRQLGNGSLAIYGTVNEDAGDYTCVAANEAGVVERSMSLT-LQSSP 4440

Query: 220  EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVA 278
             IT  P +     G  V L C+  G P+P + W    + +    R T+L    L I    
Sbjct: 4441 MITLEPVETIVDAGGRVTLDCQAAGEPQPTITWSRQGRPIPWDNRLTMLPNSSLYIAAAR 4500

Query: 279  FADSGEYTCFARNKLGTAQGSGSLTVKEH 307
              D+ EY C ARN +G+      + V+ H
Sbjct: 4501 KEDTSEYECVARNLMGSVLVRVPVIVQVH 4529


>gi|109150416|ref|NP_036425.1| peroxidasin homolog precursor [Homo sapiens]
 gi|172045828|sp|Q92626.2|PXDN_HUMAN RecName: Full=Peroxidasin homolog; AltName:
           Full=Melanoma-associated antigen MG50; AltName:
           Full=Vascular peroxidase 1; AltName: Full=p53-responsive
           gene 2 protein; Flags: Precursor
 gi|119621489|gb|EAX01084.1| hCG16913, isoform CRA_a [Homo sapiens]
 gi|119621490|gb|EAX01085.1| hCG16913, isoform CRA_a [Homo sapiens]
 gi|126643889|gb|ABO25865.1| VPO [Homo sapiens]
 gi|147897889|gb|AAI40296.1| Peroxidasin homolog (Drosophila) [synthetic construct]
 gi|168267182|dbj|BAG09668.1| peroxidasin homolog [synthetic construct]
          Length = 1479

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 194/426 (45%), Gaps = 30/426 (7%)

Query: 51  VELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           V   C   G P P+ IW ++   + +    R++  + G +L+I++ + +DQG Y C   N
Sbjct: 263 VYFTCRAEGNPKPEIIWLRNNNELSMKTDSRLNLLDDG-TLMIQNTQETDQGIYQCMAKN 321

Query: 109 GVGEAKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             GE K+  + L      A P F ++P+       E+VT EC A+G P P I W    + 
Sbjct: 322 VAGEVKTQEVTLRYFGSPARPTFVIQPQNTEVLVGESVTLECSATGHPPPRISWTRGDR- 380

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            +  P +PR  + P+  + I+N+ + D+G Y C+ATN++  V+   ++ V A  P+ T  
Sbjct: 381 -TPLPVDPRVNITPSGGLYIQNVVQGDSGEYACSATNNIDSVHATAFIIVQA-LPQFTVT 438

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSG 283
           P+D   ++G+TV   C   G P P + W     +L+   R+ +L +G L+I+ VA  D G
Sbjct: 439 PQDRVVIEGQTVDFQCEAKGNPPPVIAWTKGGSQLSVDRRHLVLSSGTLRISGVALHDQG 498

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +Y C A N +G+ +    LTV+          P D  VE G +    C++  +P  + +I
Sbjct: 499 QYECQAVNIIGSQKVVAHLTVQPRVTPVFASIPSDTTVEVGANVQLPCSSQGEP--EPAI 556

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV- 400
            W    + +      +F  S +  LT+      D+G+Y C A+  +        L+V V 
Sbjct: 557 TW--NKDGVQVTESGKFHISPEGFLTINDVGPADAGRYECVARNTIGSASVSMVLSVNVP 614

Query: 401 -------PLEAPSNFTLIQVID-----AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
                  P  A S    I  +D      +  +    P SP  L   FR  +     E+  
Sbjct: 615 DVSRNGDPFVATSIVEAIATVDRAINSTRTHLFDSRPRSPNDLLALFRYPRDPYTVEQAR 674

Query: 449 EGSIRE 454
            G I E
Sbjct: 675 AGEIFE 680



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 125/279 (44%), Gaps = 9/279 (3%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T EP+  +     TV F C+A G P+PEI W+ N   +S    +    +    + I+
Sbjct: 246 PRITSEPQDADVTSGNTVYFTCRAEGNPKPEIIWLRNNNELSMKTDSRLNLLDDGTLMIQ 305

Query: 186 NLRKSDTGNYGCNATNSLGYV-YKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRV 242
           N +++D G Y C A N  G V  ++V +        P     P++   + G++V L C  
Sbjct: 306 NTQETDQGIYQCMAKNVAGEVKTQEVTLRYFGSPARPTFVIQPQNTEVLVGESVTLECSA 365

Query: 243 FGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSG 300
            G P P ++W    +       R  I  +G L I +V   DSGEY C A N + +   + 
Sbjct: 366 TGHPPPRISWTRGDRTPLPVDPRVNITPSGGLYIQNVVQGDSGEYACSATNNIDSVHATA 425

Query: 301 SLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQ 360
            + V+     T  P+D  V  GQ+  F+C A  +P     I W +G   +  +     + 
Sbjct: 426 FIIVQALPQFTVTPQDRVVIEGQTVDFQCEAKGNP--PPVIAWTKGGSQLSVDRRHLVLS 483

Query: 361 SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           S   +L ++  +  D GQY C+A   +   +  A LTVQ
Sbjct: 484 SG--TLRISGVALHDQGQYECQAVNIIGSQKVVAHLTVQ 520



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 119/263 (45%), Gaps = 9/263 (3%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           L  + V L C   G P P+  W++ D  P+    R++    G  L I++V   D G Y C
Sbjct: 354 LVGESVTLECSATGHPPPRISWTRGDRTPLPVDPRVNITPSG-GLYIQNVVQGDSGEYAC 412

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
             +N +    + +  + V A P FTV P+     E +TV F+C+A G P P I W   G 
Sbjct: 413 SATNNIDSVHATAF-IIVQALPQFTVTPQDRVVIEGQTVDFQCEAKGNPPPVIAWTKGG- 470

Query: 165 PISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA-PEIT 222
             SQ   + R  V     + I  +   D G Y C A N +G      ++ V     P   
Sbjct: 471 --SQLSVDRRHLVLSSGTLRISGVALHDQGQYECQAVNIIGSQKVVAHLTVQPRVTPVFA 528

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
             P D     G  V L C   G P+P + W  +  ++T  G++ I   G L I DV  AD
Sbjct: 529 SIPSDTTVEVGANVQLPCSSQGEPEPAITWNKDGVQVTESGKFHISPEGFLTINDVGPAD 588

Query: 282 SGEYTCFARNKLGTAQGSGSLTV 304
           +G Y C ARN +G+A  S  L+V
Sbjct: 589 AGRYECVARNTIGSASVSMVLSV 611



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 12/185 (6%)

Query: 35  QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR---ISQGNYGKSLII 91
           Q  VT +  V +  + V+  C   G P P   W+K G  ++   R   +S G    +L I
Sbjct: 434 QFTVTPQDRVVIEGQTVDFQCEAKGNPPPVIAWTKGGSQLSVDRRHLVLSSG----TLRI 489

Query: 92  KHVEFSDQGSYTCEVSNGVGEAKSYS-IDLSVLAAPYFTVEPEFINAAEEETVTFECKAS 150
             V   DQG Y C+  N +G  K  + + +     P F   P          V   C + 
Sbjct: 490 SGVALHDQGQYECQAVNIIGSQKVVAHLTVQPRVTPVFASIPSDTTVEVGANVQLPCSSQ 549

Query: 151 GLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKD 209
           G PEP I W  +G  ++++    +  + P   +TI ++  +D G Y C A N++G     
Sbjct: 550 GEPEPAITWNKDGVQVTES---GKFHISPEGFLTINDVGPADAGRYECVARNTIGSASVS 606

Query: 210 VYVNV 214
           + ++V
Sbjct: 607 MVLSV 611



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 2/79 (2%)

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           E   IT +P+D +V +G +  F C A  +P  K  I+WLR +  +  +++ R    +D +
Sbjct: 244 ERPRITSEPQDADVTSGNTVYFTCRAEGNP--KPEIIWLRNNNELSMKTDSRLNLLDDGT 301

Query: 366 LTVTKSSELDSGQYTCRAQ 384
           L +  + E D G Y C A+
Sbjct: 302 LMIQNTQETDQGIYQCMAK 320


>gi|198421541|ref|XP_002121550.1| PREDICTED: similar to peroxidasin homolog [Ciona intestinalis]
          Length = 1642

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 166/373 (44%), Gaps = 18/373 (4%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G+P P   W  DG P+    R+ +   G SL+I+    SD+G Y C   N VG   
Sbjct: 270 CGVRGSPRPLITWHHDGTPVRLDTRVRKSTDG-SLVIQTSRQSDRGIYKCTADNTVGHRS 328

Query: 115 SYSIDLSVLAA---PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           S    L+   A   P FT  P          VTF+C+++G PEP   W HN +   + P 
Sbjct: 329 SSVARLTYRGAQGPPVFTTVPSNKEVILNGRVTFQCRSTGTPEPVTRWYHNHE---RLPV 385

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
            P   V P  + I +    + G Y C A NS G++     + ++ + P+ T  P+D+  +
Sbjct: 386 TPNFIVMPGTLHIRSASIENNGTYTCMAANSEGFINSSATL-IVRNPPKFTVKPQDQTAI 444

Query: 232 DGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSGEYTCFAR 290
            G++V L C   G P+P ++W+ N   L    RY ++ +G L I  V   D G YTC A 
Sbjct: 445 QGRSVTLDCHAEGIPEPTLSWLRNGHTLNRDQRYLVMTSGSLLIRGVNPGDEGTYTCKAE 504

Query: 291 NKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPI 350
           +  G +     +T+      T +P++  V  G +  F+C     P  +  IVW      +
Sbjct: 505 SNAGVSTSDAFVTIMVPPRFTVRPQNQRVRQGLTVDFQCQVAGRP--QPQIVWTINGRAV 562

Query: 351 DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTL 410
               +PR+      +L + ++    +G Y C A   +    AQ +LTV  P   P +F  
Sbjct: 563 --PDDPRYSLLPSGTLRLLRAQPEHAGNYRCEAANAVGAQHAQVSLTVIPP--TPLSFVR 618

Query: 411 I---QVIDAKKAV 420
               Q +DA   V
Sbjct: 619 TPEDQTVDAGTDV 631



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/372 (30%), Positives = 178/372 (47%), Gaps = 19/372 (5%)

Query: 38  VTRKKEVALRNKKVELFCIFGGTPLPQTIW--SKDGVPINPSDRISQGNYGKSLIIKHVE 95
           V   KEV L N +V   C   GTP P T W  + + +P+ P+  +  G    +L I+   
Sbjct: 348 VPSNKEVIL-NGRVTFQCRSTGTPEPVTRWYHNHERLPVTPNFIVMPG----TLHIRSAS 402

Query: 96  FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEP 155
             + G+YTC  +N  G   S S  L V   P FTV+P+   A +  +VT +C A G+PEP
Sbjct: 403 IENNGTYTCMAANSEGFINS-SATLIVRNPPKFTVKPQDQTAIQGRSVTLDCHAEGIPEP 461

Query: 156 EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
            + W+ NG  +++   + R  V  +  + I  +   D G Y C A ++ G    D +V +
Sbjct: 462 TLSWLRNGHTLNR---DQRYLVMTSGSLLIRGVNPGDEGTYTCKAESNAGVSTSDAFVTI 518

Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLK 273
           +   P  T  P+++    G TV   C+V G P+P++ W  N + +    RY++L +G L+
Sbjct: 519 MV-PPRFTVRPQNQRVRQGLTVDFQCQVAGRPQPQIVWTINGRAVPDDPRYSLLPSGTLR 577

Query: 274 ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT--DQPEDYEVEAGQSATFRCNA 331
           +       +G Y C A N +G      SLTV   T ++    PED  V+AG   T RC+ 
Sbjct: 578 LLRAQPEHAGNYRCEAANAVGAQHAQVSLTVIPPTPLSFVRTPEDQTVDAGTDVTIRCHV 637

Query: 332 VS---DPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
                D     +I W + +  +         +S+   L + + +  D+G+Y C A++  D
Sbjct: 638 TGGGVDDETAPNIYWTKDNVRLTTSGRFSISRSSLSELLIRQVARDDTGRYECVARSGSD 697

Query: 389 FIEAQATLTVQV 400
           FI A  TL V +
Sbjct: 698 FISASMTLVVNL 709



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 138/318 (43%), Gaps = 19/318 (5%)

Query: 87  KSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFE 146
           +SL  +H+       + C  +N      +Y+I      AP F   PE +   + E+V F 
Sbjct: 220 RSLSGRHIPTIQPSEFQCSDTNN----STYTI------APIFYEMPEDVEVQQGESVIFR 269

Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV 206
           C   G P P I W H+G P+        RK     + I+  R+SD G Y C A N++G+ 
Sbjct: 270 CGVRGSPRPLITWHHDGTPVRLD--TRVRKSTDGSLVIQTSRQSDRGIYKCTADNTVGHR 327

Query: 207 YKDVYVNVLAHA---PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGR 263
              V       A   P  T  P ++  +    V   CR  G P+P   W HN + L    
Sbjct: 328 SSSVARLTYRGAQGPPVFTTVPSNKEVILNGRVTFQCRSTGTPEPVTRWYHNHERLPVTP 387

Query: 264 YTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQ 323
             I+  G L I   +  ++G YTC A N  G    S +L V+     T +P+D     G+
Sbjct: 388 NFIVMPGTLHIRSASIENNGTYTCMAANSEGFINSSATLIVRNPPKFTVKPQDQTAIQGR 447

Query: 324 SATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           S T  C+A   P   LS  WLR    ++   + R++     SL +   +  D G YTC+A
Sbjct: 448 SVTLDCHAEGIPEPTLS--WLRNGHTLN--RDQRYLVMTSGSLLIRGVNPGDEGTYTCKA 503

Query: 384 QTELDFIEAQATLTVQVP 401
           ++      + A +T+ VP
Sbjct: 504 ESNAGVSTSDAFVTIMVP 521



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 138/291 (47%), Gaps = 17/291 (5%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P +  V  + + A++ + V L C   G P P   W ++G  +N   R      G SL+I+
Sbjct: 431 PPKFTVKPQDQTAIQGRSVTLDCHAEGIPEPTLSWLRNGHTLNRDQRYLVMTSG-SLLIR 489

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGL 152
            V   D+G+YTC+  +  G + S +  ++++  P FTV P+     +  TV F+C+ +G 
Sbjct: 490 GVNPGDEGTYTCKAESNAGVSTSDAF-VTIMVPPRFTVRPQNQRVRQGLTVDFQCQVAGR 548

Query: 153 PEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS--DTGNYGCNATNSLGYVYKDV 210
           P+P+I W  NG+ +   P +PR  + P+  T+  LR      GNY C A N++G  +  V
Sbjct: 549 PQPQIVWTINGRAV---PDDPRYSLLPSG-TLRLLRAQPEHAGNYRCEAANAVGAQHAQV 604

Query: 211 YVNVLAHAP-EITEAPKDEYTVDGKTVVLTCRVFGA-----PKPEVNWIHNQKEL-TGGR 263
            + V+   P      P+D+    G  V + C V G        P + W  +   L T GR
Sbjct: 605 SLTVIPPTPLSFVRTPEDQTVDAGTDVTIRCHVTGGGVDDETAPNIYWTKDNVRLTTSGR 664

Query: 264 YTILET--GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITD 312
           ++I  +   +L I  VA  D+G Y C AR+       S +L V     + D
Sbjct: 665 FSISRSSLSELLIRQVARDDTGRYECVARSGSDFISASMTLVVNLRNTVKD 715


>gi|47222186|emb|CAG11612.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 3493

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 127/403 (31%), Positives = 175/403 (43%), Gaps = 37/403 (9%)

Query: 19   VIATGISASQNRHAPKQQYV------TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGV 72
             +AT  +  Q R    Q YV       R       N +  L C   G P P   W K+G 
Sbjct: 1763 CMATNQAGIQRRRVDLQVYVPPSISEGRLDVKVTVNVQTALSCEASGIPRPTVTWMKNGR 1822

Query: 73   PINPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYF 128
             IN +D+ +Q  Y      SL++      D   Y C VSN  G A  + I+L+V   P+ 
Sbjct: 1823 VIN-TDQ-NQNMYRLLTSGSLVVIAPTVEDTAVYECVVSNEAGVASRF-INLTVHVPPFI 1879

Query: 129  TVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV-----GPNRIT 183
              EP  +       V   C ASG+PEP + W  +G  +    PN  R       GP  IT
Sbjct: 1880 ADEPTEMVVTRLSPVVMGCSASGVPEPTVQWSKDGVAL----PNEERGYSILPSGPLEIT 1935

Query: 184  IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVF 243
               L  S TG Y C A N+ G  ++ V + V    P I   P     +    V L CR  
Sbjct: 1936 SAEL--SHTGRYTCTAENAAGSTHRHVQLTV-QEVPVIASQPSTLDVILKNPVTLPCRAT 1992

Query: 244  GAPKPEVNWIHNQKE-----LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
            G+P+P ++W   QKE      TGG +T+L  G L+I+  + +DSG Y C A+N  GTA G
Sbjct: 1993 GSPRPTISW---QKEGMSISTTGGSFTVLPNGSLRISTTSVSDSGTYMCVAQNPAGTALG 2049

Query: 299  SGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF 358
               L V+    I      Y      S T +C+   D S   S+ W +  +P+      R 
Sbjct: 2050 KIKLKVQVPPVIGSDTRTYRAPTDSSVTLQCHV--DGSPPPSVTWNKDGQPLAESVRRRV 2107

Query: 359  VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            + S    L   +S   D+G+YTC A      +  + +LTVQVP
Sbjct: 2108 LSSGSLQLAFVQSE--DTGRYTCTAANPAGTVSLEMSLTVQVP 2148



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 171/364 (46%), Gaps = 14/364 (3%)

Query: 41   KKEVAL-RNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
            +KEVA+  N +V+L C+  G P P   W KDG   + S           LII   +  D 
Sbjct: 2155 EKEVAVVENSRVQLVCVAEGVPQPTLSWEKDGNLFSESSEEPTVLPSGELIITRAQAEDA 2214

Query: 100  GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHW 159
            G YTC  +N +G+ + ++  LSV   P FT     +   + E +   C  +G+P P I W
Sbjct: 2215 GRYTCVATNELGQDR-WTATLSVQTHPVFTELLGDVALKKGERLLLACGVNGIPTPHITW 2273

Query: 160  VHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
            V N    S  P +     G +++ IE + K D+G Y C A N +G +    +V++L   P
Sbjct: 2274 VFNN---SILPVHYDHANGHSQLVIERVTKEDSGTYTCVAENRVGTIKSLGFVSILE--P 2328

Query: 220  EITEAPKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITD 276
             I +       ++  G   VL C V G P P + W  N   +T G R   L  G L I  
Sbjct: 2329 PIIDGDLRSNRIEPLGGNAVLNCEVRGDPPPTIRWSKNGIHITIGDRIRQLNNGSLAIYG 2388

Query: 277  VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
                D+G YTC A N  G  + S +LT++    IT++P    V+AG +    C A  +P+
Sbjct: 2389 TVSEDAGSYTCVATNDAGAVERSVTLTLQRAPTITEEPVGTVVDAGSTVVLNCQAEGEPT 2448

Query: 337  LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
               +I W +   P+      RF   ++ SL ++   + D+ +Y C A+  +  + A+  L
Sbjct: 2449 --PTIEWSQQGRPL--LGNDRFSSLSNGSLRISSVQKEDTARYECVARNLVGSVLARVPL 2504

Query: 397  TVQV 400
            TV+V
Sbjct: 2505 TVRV 2508



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 169/375 (45%), Gaps = 17/375 (4%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
            L N+ V L C     P P   W KDG P+  S R+   + G  L I   E  D+  YTCE
Sbjct: 1614 LLNRPVTLECKSDAVPPPTLTWLKDGRPLQASARVRILSRGSYLQINQAELDDRAQYTCE 1673

Query: 106  VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             SN  G+   +  +++V  AP      + ++A   ++   EC  +G+P P++ W  +G  
Sbjct: 1674 ASNIAGQTTRH-FNVAVHVAPSIEEGSQAVSAPVNKSAVLECVVNGVPPPQVTWRKHGAI 1732

Query: 166  ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            +  A  NPR +   +  + I + + SDTG Y C ATN  G   + V + V    P I+E 
Sbjct: 1733 L--AGNNPRYRFAEDGSLHITSAQVSDTGRYLCMATNQAGIQRRRVDLQVYV-PPSISEG 1789

Query: 225  PKD-EYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGR----YTILETGDLKITDVAF 279
              D + TV+ +T  L+C   G P+P V W+ N + +   +    Y +L +G L +     
Sbjct: 1790 RLDVKVTVNVQT-ALSCEASGIPRPTVTWMKNGRVINTDQNQNMYRLLTSGSLVVIAPTV 1848

Query: 280  ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
             D+  Y C   N+ G A    +LTV     I D+P +  V         C+A   P  + 
Sbjct: 1849 EDTAVYECVVSNEAGVASRFINLTVHVPPFIADEPTEMVVTRLSPVVMGCSASGVP--EP 1906

Query: 340  SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
            ++ W +    +  E     +  +   L +T +    +G+YTC A+           LTVQ
Sbjct: 1907 TVQWSKDGVALPNEERGYSILPSG-PLEITSAELSHTGRYTCTAENAAGSTHRHVQLTVQ 1965

Query: 400  -VPLEA--PSNFTLI 411
             VP+ A  PS   +I
Sbjct: 1966 EVPVIASQPSTLDVI 1980



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 166/362 (45%), Gaps = 14/362 (3%)

Query: 43   EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
            +V L+N  V L C   G+P P   W K+G+ I+ +          SL I     SD G+Y
Sbjct: 1978 DVILKNP-VTLPCRATGSPRPTISWQKEGMSISTTGGSFTVLPNGSLRISTTSVSDSGTY 2036

Query: 103  TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
             C   N  G A    I L V   P    +     A  + +VT +C   G P P + W  +
Sbjct: 2037 MCVAQNPAGTALG-KIKLKVQVPPVIGSDTRTYRAPTDSSVTLQCHVDGSPPPSVTWNKD 2095

Query: 163  GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
            G+P++++    RR +    + +  ++  DTG Y C A N  G V  ++ + V    P I 
Sbjct: 2096 GQPLAES--VRRRVLSSGSLQLAFVQSEDTGRYTCTAANPAGTVSLEMSLTVQV-PPSIR 2152

Query: 223  EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRY--TILETGDLKITDVAFA 280
               K+   V+   V L C   G P+P ++W  +    +      T+L +G+L IT     
Sbjct: 2153 GGEKEVAVVENSRVQLVCVAEGVPQPTLSWEKDGNLFSESSEEPTVLPSGELIITRAQAE 2212

Query: 281  DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            D+G YTC A N+LG  + + +L+V+ H   T+   D  ++ G+     C     P+  ++
Sbjct: 2213 DAGRYTCVATNELGQDRWTATLSVQTHPVFTELLGDVALKKGERLLLACGVNGIPTPHIT 2272

Query: 341  IVWLRGSEPIDFESEPRFVQSNDYS-LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
             V+     P+ ++       +N +S L + + ++ DSG YTC A+  +  I++   +++ 
Sbjct: 2273 WVFNNSILPVHYD------HANGHSQLVIERVTKEDSGTYTCVAENRVGTIKSLGFVSIL 2326

Query: 400  VP 401
             P
Sbjct: 2327 EP 2328



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 181/400 (45%), Gaps = 38/400 (9%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
           V L C     P P   W KDG P+     ++  + G  L +   +  D G Y+CE +N  
Sbjct: 20  VVLHCQSDAIPPPTLSWRKDGRPLFRKPGLTVLSDGSVLRVDSAQVQDSGRYSCEATNVA 79

Query: 111 GEA-KSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
           G+  K+Y++++ V  +   + EP  +   E   +T  C++SG+P P + W  +G   S+ 
Sbjct: 80  GKTEKNYNLNVWVAPSIRGSEEPTPLTVIEGNPITMVCESSGIPPPSLVWRKDG---SEL 136

Query: 170 PPNPRRKV--GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAH-APEITEAPK 226
            P  R +V  G  ++ I +  ++DT +Y C A+++ G   K+  + V    + +++E   
Sbjct: 137 KPTQRLRVLSGGRQLQISSAARTDTASYSCTASSASGITSKEYSLQVYVRPSIKLSEGLS 196

Query: 227 DEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQKELTG-GRYTILETGD-LKITDVAFADSG 283
           D+  V  G  V L C   G P+P V W+ + + ++G  R  +L  G  L+I  V  +D+G
Sbjct: 197 DDVAVTKGGDVTLQCAAEGIPRPAVTWLKDGRPVSGQHRAKVLNEGRLLQIKTVKVSDTG 256

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTHITDQ---PEDYEVEAGQSATFRCNAVSDPSLKLS 340
            YTC A N  G A     ++V     IT Q   PE+  V         C A   P   +S
Sbjct: 257 RYTCVAVNAAGQADSRHDVSVHVPPVITGQVDVPENVSVVLKNPVALSCEASGIPLPAIS 316

Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTC---------RAQTELDF-- 389
             WL+  +P+   S    V S   SL +  ++  D G+YTC         R   +LD   
Sbjct: 317 --WLKDGQPVRASSS-VHVLSGGRSLRLMHAAVGDGGRYTCVVSNMAGEERKNFDLDILV 373

Query: 390 ---IEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPV 426
              IE + T+ V   ++   N TL          VS NPV
Sbjct: 374 PPSIEEEGTV-VDTKVKEKHNLTL-------TCEVSGNPV 405



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 151/360 (41%), Gaps = 13/360 (3%)

Query: 44   VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
            V  R   V + C   G P P   WSKDGV +   +R         L I   E S  G YT
Sbjct: 1887 VVTRLSPVVMGCSASGVPEPTVQWSKDGVALPNEERGYSILPSGPLEITSAELSHTGRYT 1946

Query: 104  CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
            C   N  G    + + L+V   P    +P  ++   +  VT  C+A+G P P I W   G
Sbjct: 1947 CTAENAAGSTHRH-VQLTVQEVPVIASQPSTLDVILKNPVTLPCRATGSPRPTISWQKEG 2005

Query: 164  KPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
              IS         V PN  + I     SD+G Y C A N  G     + + V    P + 
Sbjct: 2006 MSISTT--GGSFTVLPNGSLRISTTSVSDSGTYMCVAQNPAGTALGKIKLKV--QVPPVI 2061

Query: 223  EAPKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
             +    Y      +V L C V G+P P V W  + + L    R  +L +G L++  V   
Sbjct: 2062 GSDTRTYRAPTDSSVTLQCHVDGSPPPSVTWNKDGQPLAESVRRRVLSSGSLQLAFVQSE 2121

Query: 281  DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
            D+G YTC A N  GT     SLTV+    I    ++  V         C A   P   LS
Sbjct: 2122 DTGRYTCTAANPAGTVSLEMSLTVQVPPSIRGGEKEVAVVENSRVQLVCVAEGVPQPTLS 2181

Query: 341  IVWLR-GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
              W + G+   +   EP  + S +  L +T++   D+G+YTC A  EL      ATL+VQ
Sbjct: 2182 --WEKDGNLFSESSEEPTVLPSGE--LIITRAQAEDAGRYTCVATNELGQDRWTATLSVQ 2237



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 148/347 (42%), Gaps = 17/347 (4%)

Query: 47  RNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
           +   V L C   G P P   W KDG P++   R    N G+ L IK V+ SD G YTC  
Sbjct: 203 KGGDVTLQCAAEGIPRPAVTWLKDGRPVSGQHRAKVLNEGRLLQIKTVKVSDTGRYTCVA 262

Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVE---PEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
            N  G+A S   D+SV   P  T +   PE ++   +  V   C+ASG+P P I W+ +G
Sbjct: 263 VNAAGQADSRH-DVSVHVPPVITGQVDVPENVSVVLKNPVALSCEASGIPLPAISWLKDG 321

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           +P+ +A  +     G   + + +    D G Y C  +N  G   K+  +++L   P I E
Sbjct: 322 QPV-RASSSVHVLSGGRSLRLMHAAVGDGGRYTCVVSNMAGEERKNFDLDILV-PPSIEE 379

Query: 224 APK--DEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGR-YTILETGD-LKITDVAF 279
                D    +   + LTC V G P P + W+ + + L   R + +   G  L+I     
Sbjct: 380 EGTVVDTKVKEKHNLTLTCEVSGNPVPGIKWLKDGQMLVSDRHHQVFSNGRFLQIFGTRV 439

Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP-----EDYEVEAGQSATFRCNAVSD 334
           AD+G Y+C A N  G      +L V     I         E+  V A    +  C+A S 
Sbjct: 440 ADTGRYSCLASNSAGERSRHYNLNVLVSPTIAGSGPEGSVEEVTVTASSPTSLLCDAQSY 499

Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTC 381
           P     + WLR     +     R +      +TV  S  + S  Y C
Sbjct: 500 P--PAVVTWLRDGSSFESSDHVRVLPGVTLGMTVKMSEGIRSLAYGC 544



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 164/419 (39%), Gaps = 68/419 (16%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
            L NK  +L C   G P P+  W +D  P+ P  R    + G+ L +   + SD G Y C 
Sbjct: 813  LVNKTTQLECHADGNPAPRVSWFQDSQPVRPDGRHRILSNGRILQVLTAQVSDTGRYVCV 872

Query: 106  VSNGVGEAKSYSIDLSVLAAPYFT-VEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
             +N  G A+  S +L+V   P      PE +N      V+  C+A+GLP P + W+++  
Sbjct: 873  AANVAGSAEK-SFNLNVHVPPMVIGSNPESVNVVVNSFVSLSCEATGLPPPTLTWLNDRG 931

Query: 165  PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            P+ QA  +     G   + I   + SD G Y C A N+ G  ++ +Y+ V    P I  +
Sbjct: 932  PV-QANTHALIMPGGRTLQIMKAKVSDGGKYSCVAMNAAGEAHRHIYLTVFI-PPSIRGS 989

Query: 225  PKDE----YTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGD-LKITDVA 278
              D      T+ GK   L C     P P ++W  N + +T      IL+ G  L+I    
Sbjct: 990  SGDSPVVVNTLAGKASTLECETSAVPAPSISWYKNGRVVTESANLRILKEGQMLEIKTTG 1049

Query: 279  FADSGEYTCFARNKLGTAQ--------GSGSLTVKEH----------THITDQP------ 314
             +D+G+Y C A N  G           G   L+V  H          +  +  P      
Sbjct: 1050 VSDTGQYVCKATNIAGQVDKNFHLNVYGRARLSVFTHESSCICATMPSQFSAVPPRIEGP 1109

Query: 315  --EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF-------------- 358
              ED     G   +F C+A   P   L+  WL+   PI   + P F              
Sbjct: 1110 AEEDIAETLGNPVSFACDATGIPPPALA--WLKNGRPIGGAAFPSFSRLEMEKCVPLAFT 1167

Query: 359  ----------------VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
                            + S    L + +S   DSG YTC A            LT++VP
Sbjct: 1168 CPCELFSENSESLEMHIFSGGGKLQIARSQVSDSGTYTCVASNVEGRAHKSYRLTIRVP 1226



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 133/306 (43%), Gaps = 27/306 (8%)

Query: 43   EVALR-NKKVELFCIFGGTPLPQTIW--SKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
            +VAL+  +++ L C   G P P   W  +   +P++        N    L+I+ V   D 
Sbjct: 2248 DVALKKGERLLLACGVNGIPTPHITWVFNNSILPVH----YDHANGHSQLVIERVTKEDS 2303

Query: 100  GSYTCEVSNGVGEAKSYSIDLSVLAAPYFT-------VEPEFINAAEEETVTFECKASGL 152
            G+YTC   N VG  KS    +S+L  P          +EP   NA         C+  G 
Sbjct: 2304 GTYTCVAENRVGTIKSLGF-VSILEPPIIDGDLRSNRIEPLGGNA------VLNCEVRGD 2356

Query: 153  PEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYV 212
            P P I W  NG  I+    +  R++    + I      D G+Y C ATN  G V + V +
Sbjct: 2357 PPPTIRWSKNGIHITIG--DRIRQLNNGSLAIYGTVSEDAGSYTCVATNDAGAVERSVTL 2414

Query: 213  NVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGD 271
              L  AP ITE P       G TVVL C+  G P P + W    + L G  R++ L  G 
Sbjct: 2415 T-LQRAPTITEEPVGTVVDAGSTVVLNCQAEGEPTPTIEWSQQGRPLLGNDRFSSLSNGS 2473

Query: 272  LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE--DYEVEAGQSATFRC 329
            L+I+ V   D+  Y C ARN +G+      LTV+ H   ++  E     V  G  A  R 
Sbjct: 2474 LRISSVQKEDTARYECVARNLVGSVLARVPLTVRVHGGFSEWAEWGLCTVSCGTGAQKRL 2533

Query: 330  NAVSDP 335
               ++P
Sbjct: 2534 RRCNNP 2539



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 166/371 (44%), Gaps = 27/371 (7%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSD----RISQGNYGKSLIIKHVEFSDQGS 101
            L N+ ++L C   GTP P   W KDG  +N +     RIS    G +L +     +D G+
Sbjct: 1241 LLNESIQLVCQASGTPTPTIQWLKDGEAVNHTGSSELRISPD--GTTLTVFGAHATDGGT 1298

Query: 102  YTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFI---NAAEEETVTFECKASGLPEPEIH 158
            Y C  +N  GE +    +L+V A P    + E +    A  + +V+ EC A+G P P+++
Sbjct: 1299 YACVATNAAGE-EDRIFNLNVYAPPVINGDSETVEERTAVLDASVSLECVATGSPPPQLN 1357

Query: 159  WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
            W+ NG P+  +  + R       + I   + SD+G Y C A+N  G   +  + N+  H 
Sbjct: 1358 WLRNGLPLPLS-SHVRLLSAGQVLRITRSQVSDSGAYSCIASNRAGVDSR--HYNLQVHV 1414

Query: 219  P---EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL---TGGRYTILETGDL 272
            P   +   + +D   V G  V L C   G P P V+W+     L   +  R+  L    +
Sbjct: 1415 PPGLDGAGSTEDVTVVGGNMVSLLCVADGTPTPTVSWLKEGSALFPASNLRFLNLNM-SM 1473

Query: 273  KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCN 330
            +I      ++G Y+C A+N  G A    +L V +   I  +D   +  V        +C 
Sbjct: 1474 QIPQAHVNNTGRYSCVAKNTAGQASRHFNLKVLDPPRINGSDVVTEVSVIVNNDLELQCE 1533

Query: 331  AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
            A   P+   S+ WL+   P+      R +Q  +  L V  +   D+G+Y+C A +     
Sbjct: 1534 ASGVPA--PSLTWLKDGRPL--ADGLRVLQGGEV-LRVASAQLEDTGRYSCLANSPAGDD 1588

Query: 391  EAQATLTVQVP 401
            + +  + V VP
Sbjct: 1589 DKEFLVRVHVP 1599



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 153/347 (44%), Gaps = 24/347 (6%)

Query: 51  VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
           + + C   G P P  +W KDG  + P+ R+   + G+ L I     +D  SY+C  S+  
Sbjct: 113 ITMVCESSGIPPPSLVWRKDGSELKPTQRLRVLSGGRQLQISSAARTDTASYSCTASSAS 172

Query: 111 G-EAKSYSIDLSVLAAPYFTVEPEF---INAAEEETVTFECKASGLPEPEIHWVHNGKPI 166
           G  +K YS  L V   P   +       +   +   VT +C A G+P P + W+ +G+P+
Sbjct: 173 GITSKEYS--LQVYVRPSIKLSEGLSDDVAVTKGGDVTLQCAAEGIPRPAVTWLKDGRPV 230

Query: 167 SQAPPNPRRKV--GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI--- 221
           S      R KV      + I+ ++ SDTG Y C A N+ G    D   +V  H P +   
Sbjct: 231 SG---QHRAKVLNEGRLLQIKTVKVSDTGRYTCVAVNAAGQA--DSRHDVSVHVPPVITG 285

Query: 222 -TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETG--DLKITDVA 278
             + P++   V    V L+C   G P P ++W+ + + +       + +G   L++   A
Sbjct: 286 QVDVPENVSVVLKNPVALSCEASGIPLPAISWLKDGQPVRASSSVHVLSGGRSLRLMHAA 345

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE--DYEVEAGQSATFRCNAVSDPS 336
             D G YTC   N  G  + +  L +     I ++    D +V+   + T  C    +P 
Sbjct: 346 VGDGGRYTCVVSNMAGEERKNFDLDILVPPSIEEEGTVVDTKVKEKHNLTLTCEVSGNPV 405

Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
               I WL+  + +  +   + V SN   L +  +   D+G+Y+C A
Sbjct: 406 --PGIKWLKDGQMLVSDRHHQ-VFSNGRFLQIFGTRVADTGRYSCLA 449



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 155/354 (43%), Gaps = 18/354 (5%)

Query: 39   TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
            T ++  A+ +  V L C+  G+P PQ  W ++G+P+  S  +   + G+ L I   + SD
Sbjct: 1330 TVEERTAVLDASVSLECVATGSPPPQLNWLRNGLPLPLSSHVRLLSAGQVLRITRSQVSD 1389

Query: 99   QGSYTCEVSNGVG-EAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI 157
             G+Y+C  SN  G +++ Y++ + V          E +       V+  C A G P P +
Sbjct: 1390 SGAYSCIASNRAGVDSRHYNLQVHVPPGLDGAGSTEDVTVVGGNMVSLLCVADGTPTPTV 1449

Query: 158  HWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
             W+  G  +   P +  R +  N  + I     ++TG Y C A N+ G   +   + VL 
Sbjct: 1450 SWLKEGSAL--FPASNLRFLNLNMSMQIPQAHVNNTGRYSCVAKNTAGQASRHFNLKVL- 1506

Query: 217  HAPEI--TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD-LK 273
              P I  ++   +   +    + L C   G P P + W+ + + L  G   +L+ G+ L+
Sbjct: 1507 DPPRINGSDVVTEVSVIVNNDLELQCEASGVPAPSLTWLKDGRPLADG-LRVLQGGEVLR 1565

Query: 274  ITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE--DYEVEAGQSATFRC-- 329
            +      D+G Y+C A +  G       + V    +I  + E  D  V   +  T  C  
Sbjct: 1566 VASAQLEDTGRYSCLANSPAGDDDKEFLVRVHVPPNIAGKSETQDVSVLLNRPVTLECKS 1625

Query: 330  NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            +AV  P+L     WL+   P+   +  R +    Y L + ++   D  QYTC A
Sbjct: 1626 DAVPPPTL----TWLKDGRPLQASARVRILSRGSY-LQINQAELDDRAQYTCEA 1674



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 151/396 (38%), Gaps = 69/396 (17%)

Query: 53   LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
            L C   G P P   W  D  P+  +        G++L I   + SD G Y+C   N  GE
Sbjct: 912  LSCEATGLPPPTLTWLNDRGPVQANTHALIMPGGRTLQIMKAKVSDGGKYSCVAMNAAGE 971

Query: 113  AKSYSIDLSVLAAPYFTVE----PEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQ 168
            A  + I L+V   P         P  +N    +  T EC+ S +P P I W  NG+ +++
Sbjct: 972  AHRH-IYLTVFIPPSIRGSSGDSPVVVNTLAGKASTLECETSAVPAPSISWYKNGRVVTE 1030

Query: 169  APPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA---------- 218
            +  N R       + I+    SDTG Y C ATN  G V K+ ++NV   A          
Sbjct: 1031 SA-NLRILKEGQMLEIKTTGVSDTGQYVCKATNIAGQVDKNFHLNVYGRARLSVFTHESS 1089

Query: 219  -------------PEITEAPKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG- 262
                         P   E P +E   +  G  V   C   G P P + W+ N + + G  
Sbjct: 1090 CICATMPSQFSAVPPRIEGPAEEDIAETLGNPVSFACDATGIPPPALAWLKNGRPIGGAA 1149

Query: 263  --RYTILET------------------------------GDLKITDVAFADSGEYTCFAR 290
               ++ LE                               G L+I     +DSG YTC A 
Sbjct: 1150 FPSFSRLEMEKCVPLAFTCPCELFSENSESLEMHIFSGGGKLQIARSQVSDSGTYTCVAS 1209

Query: 291  NKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
            N  G A  S  LT++    I  ++ P +  V   +S    C A   P+   +I WL+  E
Sbjct: 1210 NVEGRAHKSYRLTIRVPPRISGSELPREMGVLLNESIQLVCQASGTPT--PTIQWLKDGE 1267

Query: 349  PIDFESEPRFVQSND-YSLTVTKSSELDSGQYTCRA 383
             ++         S D  +LTV  +   D G Y C A
Sbjct: 1268 AVNHTGSSELRISPDGTTLTVFGAHATDGGTYACVA 1303



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 168/424 (39%), Gaps = 62/424 (14%)

Query: 35  QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV 94
           Q  V     V L+N  V L C   G PLP   W KDG P+  S  +   + G+SL + H 
Sbjct: 286 QVDVPENVSVVLKNP-VALSCEASGIPLPAISWLKDGQPVRASSSVHVLSGGRSLRLMHA 344

Query: 95  EFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFIN--AAEEETVTFECKASGL 152
              D G YTC VSN  GE +  + DL +L  P    E   ++    E+  +T  C+ SG 
Sbjct: 345 AVGDGGRYTCVVSNMAGEERK-NFDLDILVPPSIEEEGTVVDTKVKEKHNLTLTCEVSGN 403

Query: 153 PEPEIHWVHNGKPISQAPPNPRRKVGPNR--ITIENLRKSDTGNYGCNATNSLGYVYKDV 210
           P P I W+ +G+ +     +   +V  N   + I   R +DTG Y C A+NS G   +  
Sbjct: 404 PVPGIKWLKDGQMLVS---DRHHQVFSNGRFLQIFGTRVADTGRYSCLASNSAGERSRHY 460

Query: 211 YVNVLAHAPEIT----EAPKDEYTVDGKT-VVLTCRVFGAPKPEVNWIHNQKE------- 258
            +NVL  +P I     E   +E TV   +   L C     P   V W+ +          
Sbjct: 461 NLNVLV-SPTIAGSGPEGSVEEVTVTASSPTSLLCDAQSYPPAVVTWLRDGSSFESSDHV 519

Query: 259 -----LTGGRYTILETG--------------------DLKITDVAFADSGEYTCFARNKL 293
                +T G    +  G                     L+I +    D+G YTC A N+ 
Sbjct: 520 RVLPGVTLGMTVKMSEGIRSLAYGCHGFITPASAGGRTLQILNAKEEDAGRYTCVAANEA 579

Query: 294 GTAQGSGSLTVKEHTHITD--------QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLR 345
           G       L V    HI          +P++ +V+   S T  C A + PS  L   W +
Sbjct: 580 GETLKHYELKVFVPPHINRNDIPGEGLKPKEVKVKVNSSLTLECAAQAFPSPALQ--WYK 637

Query: 346 GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAP 405
             + +  +       S    + V  +   D+G+YTC A       E    + VQV    P
Sbjct: 638 DGQILQVDDHMSITASGRM-VQVEHARVSDTGRYTCVATNIAGEDEKDFDVNVQV----P 692

Query: 406 SNFT 409
            NFT
Sbjct: 693 PNFT 696



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 160/378 (42%), Gaps = 52/378 (13%)

Query: 51   VELFCIFGGTPLPQTIWSKDGVPIN----------------------PSDRISQGNY--- 85
            V   C   G P P   W K+G PI                       P +  S+ +    
Sbjct: 1122 VSFACDATGIPPPALAWLKNGRPIGGAAFPSFSRLEMEKCVPLAFTCPCELFSENSESLE 1181

Query: 86   ------GKSLIIKHVEFSDQGSYTCEVSNGVGEA-KSYSIDLSVLAAPYFTVEPEFINAA 138
                  G  L I   + SD G+YTC  SN  G A KSY + + V      +  P  +   
Sbjct: 1182 MHIFSGGGKLQIARSQVSDSGTYTCVASNVEGRAHKSYRLTIRVPPRISGSELPREMGVL 1241

Query: 139  EEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYG 196
              E++   C+ASG P P I W+ +G+ ++    +  R + P+   +T+     +D G Y 
Sbjct: 1242 LNESIQLVCQASGTPTPTIQWLKDGEAVNHTGSSELR-ISPDGTTLTVFGAHATDGGTYA 1300

Query: 197  CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLT------CRVFGAPKPEV 250
            C ATN+ G   +D   N+  +AP +     D  TV+ +T VL       C   G+P P++
Sbjct: 1301 CVATNAAG--EEDRIFNLNVYAPPVING--DSETVEERTAVLDASVSLECVATGSPPPQL 1356

Query: 251  NWIHNQKEL-TGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT 308
            NW+ N   L       +L  G  L+IT    +DSG Y+C A N+ G      +L V    
Sbjct: 1357 NWLRNGLPLPLSSHVRLLSAGQVLRITRSQVSDSGAYSCIASNRAGVDSRHYNLQVHVPP 1416

Query: 309  HI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +      ED  V  G   +  C A   P+  +S  WL+    +   S  RF+  N  S+
Sbjct: 1417 GLDGAGSTEDVTVVGGNMVSLLCVADGTPTPTVS--WLKEGSALFPASNLRFLNLN-MSM 1473

Query: 367  TVTKSSELDSGQYTCRAQ 384
             + ++   ++G+Y+C A+
Sbjct: 1474 QIPQAHVNNTGRYSCVAK 1491



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 159/388 (40%), Gaps = 37/388 (9%)

Query: 40  RKKEVALR-NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
           + KEV ++ N  + L C     P P   W KDG  +   D +S    G+ + ++H   SD
Sbjct: 607 KPKEVKVKVNSSLTLECAAQAFPSPALQWYKDGQILQVDDHMSITASGRMVQVEHARVSD 666

Query: 99  QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFT-------------VEPEFINAAEEETVTF 145
            G YTC  +N  GE +    D++V   P FT             VE +  +      ++ 
Sbjct: 667 TGRYTCVATNIAGEDEK-DFDVNVQVPPNFTRAGGAAGSTSSPGVEGDVRDVILNNPISL 725

Query: 146 ECKASGLPEPEIHWVHNGKPISQAPPNPRRKV----GPNRITIENLRKSDTGNYGCNATN 201
            C+ + +P P + W  +G+ ++        KV    G   + I   +  D G Y C A N
Sbjct: 726 YCETNAVPPPTLTWYKDGQLLASG-----DKVLILPGGRVLQIPRAQAEDAGRYICMAVN 780

Query: 202 SLGYVYKDVYVNVLAHAPEI-----TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
             G     ++ +V    P I     ++ P++   +  KT  L C   G P P V+W  + 
Sbjct: 781 EAG--EDSIHYDVRVLLPPIIRGTVSDFPEEVTVLVNKTTQLECHADGNPAPRVSWFQDS 838

Query: 257 KELT-GGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK-EHTHITDQ 313
           + +   GR+ IL  G  L++     +D+G Y C A N  G+A+ S +L V      I   
Sbjct: 839 QPVRPDGRHRILSNGRILQVLTAQVSDTGRYVCVAANVAGSAEKSFNLNVHVPPMVIGSN 898

Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
           PE   V      +  C A   P   L+  WL    P+   +    +     +L + K+  
Sbjct: 899 PESVNVVVNSFVSLSCEATGLPPPTLT--WLNDRGPVQANTH-ALIMPGGRTLQIMKAKV 955

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVP 401
            D G+Y+C A            LTV +P
Sbjct: 956 SDGGKYSCVAMNAAGEAHRHIYLTVFIP 983



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 102/420 (24%), Positives = 159/420 (37%), Gaps = 68/420 (16%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
            L  K   L C     P P   W K+G  +  S  +     G+ L IK    SD G Y C+
Sbjct: 1000 LAGKASTLECETSAVPAPSISWYKNGRVVTESANLRILKEGQMLEIKTTGVSDTGQYVCK 1059

Query: 106  VSNGVGEA-KSYSIDL-----------------SVLAAPYFTVEPEFINAAEEET----- 142
             +N  G+  K++ +++                 + + + +  V P     AEE+      
Sbjct: 1060 ATNIAGQVDKNFHLNVYGRARLSVFTHESSCICATMPSQFSAVPPRIEGPAEEDIAETLG 1119

Query: 143  --VTFECKASGLPEPEIHWVHNGKPISQA--PPNPRRKV--------------------- 177
              V+F C A+G+P P + W+ NG+PI  A  P   R ++                     
Sbjct: 1120 NPVSFACDATGIPPPALAWLKNGRPIGGAAFPSFSRLEMEKCVPLAFTCPCELFSENSES 1179

Query: 178  -------GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI--TEAPKDE 228
                   G  ++ I   + SD+G Y C A+N  G  +K   + +    P I  +E P++ 
Sbjct: 1180 LEMHIFSGGGKLQIARSQVSDSGTYTCVASNVEGRAHKSYRLTIRV-PPRISGSELPREM 1238

Query: 229  YTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFA----DSGE 284
              +  +++ L C+  G P P + W+ + + +     + L       T   F     D G 
Sbjct: 1239 GVLLNESIQLVCQASGTPTPTIQWLKDGEAVNHTGSSELRISPDGTTLTVFGAHATDGGT 1298

Query: 285  YTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAG---QSATFRCNAVSDPSLKLSI 341
            Y C A N  G      +L V     I    E  E        S +  C A   P  +L+ 
Sbjct: 1299 YACVATNAAGEEDRIFNLNVYAPPVINGDSETVEERTAVLDASVSLECVATGSPPPQLN- 1357

Query: 342  VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
             WLR   P+   S  R + +    L +T+S   DSG Y+C A            L V VP
Sbjct: 1358 -WLRNGLPLPLSSHVRLLSAGQV-LRITRSQVSDSGAYSCIASNRAGVDSRHYNLQVHVP 1415



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 141/342 (41%), Gaps = 31/342 (9%)

Query: 86  GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFT--------VEPEFINA 137
           G++L I + +  D G YTC  +N  GE   +  +L V   P+          ++P+ +  
Sbjct: 555 GRTLQILNAKEEDAGRYTCVAANEAGETLKH-YELKVFVPPHINRNDIPGEGLKPKEVKV 613

Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
               ++T EC A   P P + W  +G+ I Q   +         + +E+ R SDTG Y C
Sbjct: 614 KVNSSLTLECAAQAFPSPALQWYKDGQ-ILQVDDHMSITASGRMVQVEHARVSDTGRYTC 672

Query: 198 NATNSLGYVYKDVYVNV--------LAHAPEITEAPKDEYTVD----GKTVVLTCRVFGA 245
            ATN  G   KD  VNV           A   T +P  E  V        + L C     
Sbjct: 673 VATNIAGEDEKDFDVNVQVPPNFTRAGGAAGSTSSPGVEGDVRDVILNNPISLYCETNAV 732

Query: 246 PKPEVNWIHNQKELTGGRYTILETGD--LKITDVAFADSGEYTCFARNKLGTAQGSGSLT 303
           P P + W  + + L  G   ++  G   L+I      D+G Y C A N+ G       + 
Sbjct: 733 PPPTLTWYKDGQLLASGDKVLILPGGRVLQIPRAQAEDAGRYICMAVNEAGEDSIHYDVR 792

Query: 304 VKE----HTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFV 359
           V         ++D PE+  V   ++    C+A  +P+ ++S  W + S+P+  +   R +
Sbjct: 793 VLLPPIIRGTVSDFPEEVTVLVNKTTQLECHADGNPAPRVS--WFQDSQPVRPDGRHRIL 850

Query: 360 QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
            SN   L V  +   D+G+Y C A       E    L V VP
Sbjct: 851 -SNGRILQVLTAQVSDTGRYVCVAANVAGSAEKSFNLNVHVP 891



 Score = 47.4 bits (111), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 7/172 (4%)

Query: 233 GKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGD-LKITDVAFADSGEYTCFAR 290
           G  VVL C+    P P ++W  + + L      T+L  G  L++      DSG Y+C A 
Sbjct: 17  GGPVVLHCQSDAIPPPTLSWRKDGRPLFRKPGLTVLSDGSVLRVDSAQVQDSGRYSCEAT 76

Query: 291 NKLGTAQGSGSLTVKEHTHI--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
           N  G  + + +L V     I  +++P    V  G   T  C +   P    S+VW +   
Sbjct: 77  NVAGKTEKNYNLNVWVAPSIRGSEEPTPLTVIEGNPITMVCESSGIP--PPSLVWRKDGS 134

Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
            +      R V S    L ++ ++  D+  Y+C A +       + +L V V
Sbjct: 135 ELKPTQRLR-VLSGGRQLQISSAARTDTASYSCTASSASGITSKEYSLQVYV 185


>gi|6273399|gb|AAF06354.1|AF200348_1 melanoma-associated antigen MG50 [Homo sapiens]
 gi|1504040|dbj|BAA13219.1| KIAA0230 [Homo sapiens]
          Length = 1496

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 194/426 (45%), Gaps = 30/426 (7%)

Query: 51  VELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
           V   C   G P P+ IW ++   + +    R++  + G +L+I++ + +DQG Y C   N
Sbjct: 280 VYFTCRAEGNPKPEIIWLRNNNELSMKTDSRLNLLDDG-TLMIQNTQETDQGIYQCMAKN 338

Query: 109 GVGEAKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
             GE K+  + L      A P F ++P+       E+VT EC A+G P P I W    + 
Sbjct: 339 VAGEVKTQEVTLRYFGSPARPTFVIQPQNTEVLVGESVTLECSATGHPPPRISWTRGDR- 397

Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
            +  P +PR  + P+  + I+N+ + D+G Y C+ATN++  V+   ++ V A  P+ T  
Sbjct: 398 -TPLPVDPRVNITPSGGLYIQNVVQGDSGEYACSATNNIDSVHATAFIIVQA-LPQFTVT 455

Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSG 283
           P+D   ++G+TV   C   G P P + W     +L+   R+ +L +G L+I+ VA  D G
Sbjct: 456 PQDRVVIEGQTVDFQCEAKGNPPPVIAWTKGGSQLSVDRRHLVLSSGTLRISGVALHDQG 515

Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
           +Y C A N +G+ +    LTV+          P D  VE G +    C++  +P  + +I
Sbjct: 516 QYECQAVNIIGSQKVVAHLTVQPRVTPVFASIPSDTTVEVGANVQLPCSSQGEP--EPAI 573

Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV- 400
            W    + +      +F  S +  LT+      D+G+Y C A+  +        L+V V 
Sbjct: 574 TW--NKDGVQVTESGKFHISPEGFLTINDVGPADAGRYECVARNTIGSASVSMVLSVNVP 631

Query: 401 -------PLEAPSNFTLIQVID-----AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
                  P  A S    I  +D      +  +    P SP  L   FR  +     E+  
Sbjct: 632 DVSRNGDPFVATSIVEAIATVDRAINSTRTHLFDSRPRSPNDLLALFRYPRDPYTVEQAR 691

Query: 449 EGSIRE 454
            G I E
Sbjct: 692 AGEIFE 697



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 125/279 (44%), Gaps = 9/279 (3%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
           P  T EP+  +     TV F C+A G P+PEI W+ N   +S    +    +    + I+
Sbjct: 263 PRITSEPQDADVTSGNTVYFTCRAEGNPKPEIIWLRNNNELSMKTDSRLNLLDDGTLMIQ 322

Query: 186 NLRKSDTGNYGCNATNSLGYV-YKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRV 242
           N +++D G Y C A N  G V  ++V +        P     P++   + G++V L C  
Sbjct: 323 NTQETDQGIYQCMAKNVAGEVKTQEVTLRYFGSPARPTFVIQPQNTEVLVGESVTLECSA 382

Query: 243 FGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSG 300
            G P P ++W    +       R  I  +G L I +V   DSGEY C A N + +   + 
Sbjct: 383 TGHPPPRISWTRGDRTPLPVDPRVNITPSGGLYIQNVVQGDSGEYACSATNNIDSVHATA 442

Query: 301 SLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQ 360
            + V+     T  P+D  V  GQ+  F+C A  +P     I W +G   +  +     + 
Sbjct: 443 FIIVQALPQFTVTPQDRVVIEGQTVDFQCEAKGNP--PPVIAWTKGGSQLSVDRRHLVLS 500

Query: 361 SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           S   +L ++  +  D GQY C+A   +   +  A LTVQ
Sbjct: 501 SG--TLRISGVALHDQGQYECQAVNIIGSQKVVAHLTVQ 537



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 119/263 (45%), Gaps = 9/263 (3%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           L  + V L C   G P P+  W++ D  P+    R++    G  L I++V   D G Y C
Sbjct: 371 LVGESVTLECSATGHPPPRISWTRGDRTPLPVDPRVNITPSG-GLYIQNVVQGDSGEYAC 429

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
             +N +    + +  + V A P FTV P+     E +TV F+C+A G P P I W   G 
Sbjct: 430 SATNNIDSVHATAF-IIVQALPQFTVTPQDRVVIEGQTVDFQCEAKGNPPPVIAWTKGG- 487

Query: 165 PISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA-PEIT 222
             SQ   + R  V     + I  +   D G Y C A N +G      ++ V     P   
Sbjct: 488 --SQLSVDRRHLVLSSGTLRISGVALHDQGQYECQAVNIIGSQKVVAHLTVQPRVTPVFA 545

Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
             P D     G  V L C   G P+P + W  +  ++T  G++ I   G L I DV  AD
Sbjct: 546 SIPSDTTVEVGANVQLPCSSQGEPEPAITWNKDGVQVTESGKFHISPEGFLTINDVGPAD 605

Query: 282 SGEYTCFARNKLGTAQGSGSLTV 304
           +G Y C ARN +G+A  S  L+V
Sbjct: 606 AGRYECVARNTIGSASVSMVLSV 628



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 12/185 (6%)

Query: 35  QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR---ISQGNYGKSLII 91
           Q  VT +  V +  + V+  C   G P P   W+K G  ++   R   +S G    +L I
Sbjct: 451 QFTVTPQDRVVIEGQTVDFQCEAKGNPPPVIAWTKGGSQLSVDRRHLVLSSG----TLRI 506

Query: 92  KHVEFSDQGSYTCEVSNGVGEAKSYS-IDLSVLAAPYFTVEPEFINAAEEETVTFECKAS 150
             V   DQG Y C+  N +G  K  + + +     P F   P          V   C + 
Sbjct: 507 SGVALHDQGQYECQAVNIIGSQKVVAHLTVQPRVTPVFASIPSDTTVEVGANVQLPCSSQ 566

Query: 151 GLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKD 209
           G PEP I W  +G  ++++    +  + P   +TI ++  +D G Y C A N++G     
Sbjct: 567 GEPEPAITWNKDGVQVTES---GKFHISPEGFLTINDVGPADAGRYECVARNTIGSASVS 623

Query: 210 VYVNV 214
           + ++V
Sbjct: 624 MVLSV 628



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 2/79 (2%)

Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
           E   IT +P+D +V +G +  F C A  +P  K  I+WLR +  +  +++ R    +D +
Sbjct: 261 ERPRITSEPQDADVTSGNTVYFTCRAEGNP--KPEIIWLRNNNELSMKTDSRLNLLDDGT 318

Query: 366 LTVTKSSELDSGQYTCRAQ 384
           L +  + E D G Y C A+
Sbjct: 319 LMIQNTQETDQGIYQCMAK 337


>gi|291408742|ref|XP_002720673.1| PREDICTED: contactin 6 [Oryctolagus cuniculus]
          Length = 1117

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 181/389 (46%), Gaps = 15/389 (3%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    R S+      L I + +  D+G Y 
Sbjct: 327 AAKDSSVKLECFALGNPVPDISWRRLDGSPLPGKARFSKSQ--ALLEIPNFQQEDEGVYE 384

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G   +    L   A P +  + +  + +  +++ +EC+ASG P P   W  NG
Sbjct: 385 CAAGNLRGRNLAKG-QLVFYAPPEWEQKIQNTHLSIYDSLFWECRASGKPSPWYTWFKNG 443

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           +P+    P  R ++    + I  L  SD+  Y C A N  G +  +  + VLA AP+ + 
Sbjct: 444 EPLH---PEERIQIENGTLVITTLNVSDSAVYQCAAENKHGVISTNAELRVLASAPDFSR 500

Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHN-QKELTGGRYTILETGDLKITDVAFA 280
            P   +++   G  V + CR    P+  V+W    +      R  +LE G LKI +V  +
Sbjct: 501 NPIKRHSIVHVGGDVTIECRPRAFPRATVSWRRGAEGLRQSRRLLLLEDGGLKIHNVTRS 560

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ GTA+ +  L VKE T IT  P + +V  G+S    C    DPS  ++
Sbjct: 561 DAGPYTCLATNQFGTARDTSQLIVKERTVITVPPSNMDVTVGESIILPCQVSRDPSTAVA 620

Query: 341 IVWLRGSEPIDFESEP----RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            +WL   + ID  +      R    +   L +       SG+Y C  QT L+ + A A +
Sbjct: 621 FLWLFNGDLIDLRNGATHFERVGGESAGDLMIRNIQLRHSGRYLCTVQTPLESLSAAADV 680

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
           TV+ P   P   + ++ + +  + + W P
Sbjct: 681 TVRGPPGPPEGVS-VEHVSSTSSHIRWRP 708



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 167/662 (25%), Positives = 255/662 (38%), Gaps = 91/662 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  V+ SD G+YTC V+N   EA+      SV   P   V+                
Sbjct: 268 NLYIAKVQPSDVGNYTCFVTN--REARR-----SVRGPPSPLVQRADGVMGEYEPKIEVR 320

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            P+ + AA++ +V  EC A G P P+I W   +G P+   P   R       + I N ++
Sbjct: 321 FPDTVPAAKDSSVKLECFALGNPVPDISWRRLDGSPL---PGKARFSKSQALLEIPNFQQ 377

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A N  G       + V    PE  +  ++ +     ++   CR  G P P 
Sbjct: 378 EDEGVYECAAGNLRGRNLAKGQL-VFYAPPEWEQKIQNTHLSIYDSLFWECRASGKPSPW 436

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W  N + L       +E G L IT +  +DS  Y C A NK G    +  L V     
Sbjct: 437 YTWFKNGEPLHPEERIQIENGTLVITTLNVSDSAVYQCAAENKHGVISTNAELRVLASAP 496

Query: 309 HITDQPEDYE--VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P      V  G   T  C   + P  + ++ W RG+E        R +   D  L
Sbjct: 497 DFSRNPIKRHSIVHVGGDVTIECRPRAFP--RATVSWRRGAE--GLRQSRRLLLLEDGGL 552

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ---VPLEAPSNF--TLIQVIDAKKAVV 421
            +   +  D+G YTC A  +       + L V+   V    PSN   T+ + I      V
Sbjct: 553 KIHNVTRSDAGPYTCLATNQFGTARDTSQLIVKERTVITVPPSNMDVTVGESI-ILPCQV 611

Query: 422 SWNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
           S +P +  +    F G  +      T  E+ G  S  +L++   +               
Sbjct: 612 SRDPSTAVAFLWLFNGDLIDLRNGATHFERVGGESAGDLMIRNIQ--------------- 656

Query: 477 FARVLAFNGAYNG---PPSEIISF---VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
               L  +G Y      P E +S    VT  G PG  + +    + S++ +++W      
Sbjct: 657 ----LRHSGRYLCTVQTPLESLSAAADVTVRGPPGPPEGVSVEHVSSTSSHIRWRPGPDN 712

Query: 531 NGVLMGYKIKYQ---SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
           N  +  + ++ +   SV    VG      P I    T +A + GL P  +Y   +     
Sbjct: 713 NSPIQIFTVQTRTPFSVGWQAVG----TDPEILSGQTYNATVVGLSPWVEYEFRVVAGNS 768

Query: 588 AGDGAESK------YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
            G G  SK          VP   P N+EG G + + LV++W  + E   +   F Y + +
Sbjct: 769 IGIGEPSKPSELLRTRASVPAVPPVNIEGGGGSRSELVVTWEPIAEELQSGDGFGYLVMF 828

Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNK 698
           R   +  AW +  V     S  V  N+      P+E+KV        GEGS+  + IV  
Sbjct: 829 RPLGS-TAWTKASVASVESSRFVYRNESIAPLSPFEVKV--GVYNDQGEGSLSPVSIVYS 885

Query: 699 GE 700
           GE
Sbjct: 886 GE 887



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 151/642 (23%), Positives = 252/642 (39%), Gaps = 89/642 (13%)

Query: 55   CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
            C   G P P   W K+G P++P +RI   N   +L+I  +  SD   Y C   N  G   
Sbjct: 427  CRASGKPSPWYTWFKNGEPLHPEERIQIEN--GTLVITTLNVSDSAVYQCAAENKHG-VI 483

Query: 115  SYSIDLSVLA-APYFTVEP----EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
            S + +L VLA AP F+  P      ++   +  VT EC+    P   + W    + + Q+
Sbjct: 484  STNAELRVLASAPDFSRNPIKRHSIVHVGGD--VTIECRPRAFPRATVSWRRGAEGLRQS 541

Query: 170  PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
                  + G   + I N+ +SD G Y C ATN  G   +D    ++     IT  P +  
Sbjct: 542  RRLLLLEDG--GLKIHNVTRSDAGPYTCLATNQFGTA-RDTSQLIVKERTVITVPPSNMD 598

Query: 230  TVDGKTVVLTCRVFGAPKPEVN--WIHNQK--ELTGG-----RYTILETGDLKITDVAFA 280
               G++++L C+V   P   V   W+ N    +L  G     R      GDL I ++   
Sbjct: 599  VTVGESIILPCQVSRDPSTAVAFLWLFNGDLIDLRNGATHFERVGGESAGDLMIRNIQLR 658

Query: 281  DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE--AGQSATFRCNAVSDPSLK 338
             SG Y C  +  L +   +  +TV+        PE   VE  +  S+  R     D +  
Sbjct: 659  HSGRYLCTVQTPLESLSAAADVTVRGPP---GPPEGVSVEHVSSTSSHIRWRPGPDNNSP 715

Query: 339  LSIVWLRGSEPIDFE-----SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393
            + I  ++   P         ++P  +    Y+ TV   S     ++   A   +   E  
Sbjct: 716  IQIFTVQTRTPFSVGWQAVGTDPEILSGQTYNATVVGLSPWVEYEFRVVAGNSIGIGEPS 775

Query: 394  A-----TLTVQVPLEAPSNFTLIQVIDAKKA--VVSWNPVSPQSLRGHFRGYKVQ----- 441
                       VP   P N   I+     ++  VV+W P++ +   G   GY V      
Sbjct: 776  KPSELLRTRASVPAVPPVN---IEGGGGSRSELVVTWEPIAEELQSGDGFGYLVMFRPLG 832

Query: 442  --TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN---GAYNGPPSEIIS 496
               WT              K    + E  +FV  +++ A +  F    G YN      +S
Sbjct: 833  STAWT--------------KASVASVESSRFVYRNESIAPLSPFEVKVGVYNDQGEGSLS 878

Query: 497  FVT--------PEGVP-GT-VQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKG 546
             V+        P+  P GT VQS  A  +  S   + W    +  G ++GY++ Y +   
Sbjct: 879  PVSIVYSGEDEPQLAPRGTSVQSFSASEVEVSWNAIAW---NRNTGRVLGYEVLYWTEDS 935

Query: 547  TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----P 601
             +  P++ +     + TT +  + GL+ +T Y   +  Y   G G  S  +        P
Sbjct: 936  RE--PMIGKARVSGNITTKN--ITGLKANTIYFASVRAYNTGGTGPSSPPVNVTTKKSPP 991

Query: 602  FKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
             + P N+  + S  + L ++W  +  +E+ +    Y+I +R+
Sbjct: 992  SQPPANIAWKLSN-SKLCLNWEHVKTMENESEVLGYKILYRQ 1032



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 112/286 (39%), Gaps = 34/286 (11%)

Query: 123 LAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGP 179
           ++ P FT EP    F   +    V   C A+G P P   W HNG  I  A  + R ++  
Sbjct: 111 VSCPAFTQEPRDVTFPLGSSASEVILSCAAAGYPAPHYRWRHNGTAIDFA-VSERYRLEG 169

Query: 180 NRITIENLR-KSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
             + I + R   D G Y C ATN LG           A+  +     +   +V +G+ VV
Sbjct: 170 GSLAIRSPRTDQDAGVYQCLATNLLGTTVSREARLQFAYIEDFEAKARSAVSVREGQGVV 229

Query: 238 LTCRVFGAPKPEVN-----WIHNQKELT----GGRYTILETGDLKITDVAFADSGEYTCF 288
           L C   G P P V      W  N   L+      R+   +TG+L I  V  +D G YTCF
Sbjct: 230 LLC---GRP-PHVGDLSYAWAFNDSLLSVHEDRRRFISQQTGNLYIAKVQPSDVGNYTCF 285

Query: 289 ARNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSL 337
             N+    + +G  S  V+    +  +         P+        S    C A+ +P  
Sbjct: 286 VTNREARRSVRGPPSPLVQRADGVMGEYEPKIEVRFPDTVPAAKDSSVKLECFALGNPVP 345

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
            +S   L GS       + RF +S    L +    + D G Y C A
Sbjct: 346 DISWRRLDGSP---LPGKARFSKSQAL-LEIPNFQQEDEGVYECAA 387



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 85/371 (22%), Positives = 130/371 (35%), Gaps = 34/371 (9%)

Query: 50  KVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVSN 108
           +V L C   G P P   W  +G  I+ +        G SL I+      D G Y C  +N
Sbjct: 133 EVILSCAAAGYPAPHYRWRHNGTAIDFAVSERYRLEGGSLAIRSPRTDQDAGVYQCLATN 192

Query: 109 GVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFEC-KASGLPEPEIHWVHNGKPI 166
            +G   S    L       F  +    ++  E + V   C +   + +    W  N   +
Sbjct: 193 LLGTTVSREARLQFAYIEDFEAKARSAVSVREGQGVVLLCGRPPHVGDLSYAWAFNDSLL 252

Query: 167 SQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGY----------------VYK 208
           S    + RR +      + I  ++ SD GNY C  TN                    V  
Sbjct: 253 S-VHEDRRRFISQQTGNLYIAKVQPSDVGNYTCFVTNREARRSVRGPPSPLVQRADGVMG 311

Query: 209 DVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTIL 267
           +    +    P+   A KD       +V L C   G P P+++W   +   L G      
Sbjct: 312 EYEPKIEVRFPDTVPAAKD------SSVKLECFALGNPVPDISWRRLDGSPLPGKARFSK 365

Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
               L+I +    D G Y C A N  G     G L          + ++  +    S  +
Sbjct: 366 SQALLEIPNFQQEDEGVYECAAGNLRGRNLAKGQLVFYAPPEWEQKIQNTHLSIYDSLFW 425

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
            C A   PS   +  W +  EP+  E     +Q  + +L +T  +  DS  Y C A+ + 
Sbjct: 426 ECRASGKPSPWYT--WFKNGEPLHPEER---IQIENGTLVITTLNVSDSAVYQCAAENKH 480

Query: 388 DFIEAQATLTV 398
             I   A L V
Sbjct: 481 GVISTNAELRV 491



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 14/192 (7%)

Query: 409  TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
            T +Q   A +  VSWN ++     G   GY+V  WTE   E  I +  V+ G  TT  + 
Sbjct: 897  TSVQSFSASEVEVSWNAIAWNRNTGRVLGYEVLYWTEDSREPMIGKARVS-GNITTKNIT 955

Query: 469  KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VK 526
                 +  FA V A+N    GP S  ++  T +  P    +  A  L +S   L W  VK
Sbjct: 956  GLKANTIYFASVRAYNTGGTGPSSPPVNVTTKKSPPSQPPANIAWKLSNSKLCLNWEHVK 1015

Query: 527  PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGY 585
              +    ++GYKI Y+  + +K+        ++ +   TSA+L  L P    Y I +   
Sbjct: 1016 TMENESEVLGYKILYRQSRQSKM--------HVLETNNTSAEL--LVPFEEDYLIEIRTV 1065

Query: 586  TKAGDGAESKYL 597
            +  GDG+ S+ +
Sbjct: 1066 SDGGDGSSSQEI 1077


>gi|351706113|gb|EHB09032.1| Contactin-6 [Heterocephalus glaber]
          Length = 980

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 177/718 (24%), Positives = 300/718 (41%), Gaps = 82/718 (11%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
           A ++  V+L C   G P+P   W + DG P+    +I        L I + +  D+G Y 
Sbjct: 190 AAKDSSVKLECFALGNPVPDISWRRLDGSPL--PRKIKYSKSQAILEIPNFQQEDEGFYE 247

Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
           C   N  G   +    L   A P +  + +    +  + + +ECKASG P P   W+ NG
Sbjct: 248 CLAGNLRGRNLAKG-QLIFYAPPEWEHKIQNTYLSIYDNLYWECKASGKPNPWYTWLKNG 306

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
           + ++      R ++    +TI  L  SD+G Y C A N    +Y +  + VLA AP+ ++
Sbjct: 307 ERLNS---EERIQIENGTLTITILNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSK 363

Query: 224 APKDEYTV--DGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
           +P  + ++   G  + + C+    P+  ++W    + L    R  +LE G LKI +V  +
Sbjct: 364 SPIKKISIVQIGGDISIECKPNAFPRAAISWKRGSESLRQSKRVFLLEDGSLKIHNVTRS 423

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
           D+G YTC A N+ G A+ +GSL VKE T IT  P   +V  G+S    C    DPS+++ 
Sbjct: 424 DAGPYTCIATNQFGIAKNTGSLIVKERTIITVPPSKMDVTVGESIVLPCQVSHDPSIEVV 483

Query: 341 IVWLRGSEPIDFESE-PRFVQSNDYS---LTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
             W      ID + +   F +    S   L +       SG+Y C  +T L+ + A A +
Sbjct: 484 FAWSFNGNIIDLQKQVAHFEKIGGESVGDLMIRNIQLSHSGKYLCTVRTTLERLSAVADI 543

Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
            V+ P   P +   ++ I +  + +SW P  P +     + + VQT T          ++
Sbjct: 544 IVRGPPGPPEDVR-VEHISSTTSQISWRP-GPDN-NSPIQIFTVQTRTPFSVGWQAVATV 600

Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA 512
            E++   G++    V       +   RV+A N    G PS+    +  +    +V  L  
Sbjct: 601 PEIL--NGQTYNATVVGLSSWVEYEFRVVAGNSIGIGEPSKPSKLLRTK---ASVPVLAP 655

Query: 513 IPL-----GSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565
           + +     G     + W  +  E  NG   GY + ++ V  T      ER+P + + +  
Sbjct: 656 VNINGGGGGRYELVITWESIPEELQNGEGFGYIVMFRPVGSTAWTK--ERVPLV-ESSKF 712

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS-----TPNNLVI 620
             +   + P + + + +  Y   G+G  S        ++   +  RG+     + + + +
Sbjct: 713 VYRNESIMPLSPFEVKVGVYNNEGEGPLSTVSIVYSGEDEPQLAPRGTSLQSFSASEMEV 772

Query: 621 SWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQ 680
           SW A+                       AWN       R +  VL        YE   V 
Sbjct: 773 SWNAI-----------------------AWN-------RNTGRVLG-------YE---VL 792

Query: 681 TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
            WT+   E  I ++ V+ G  T   +      +  FA V A+N A  GP S  ++  T
Sbjct: 793 YWTDDSKESIIGKIRVS-GNVTNKSITGLKANTVYFASVRAYNTAGTGPSSLPVNVTT 849



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 164/660 (24%), Positives = 256/660 (38%), Gaps = 87/660 (13%)

Query: 88  SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
           +L I  VE SD G+YTC V+N   EA+      SV   P   V+                
Sbjct: 131 NLYIAKVEPSDVGNYTCFVTNK--EAQR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 183

Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
            PE I AA++ +V  EC A G P P+I W   +G P+   P   +       + I N ++
Sbjct: 184 FPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPL---PRKIKYSKSQAILEIPNFQQ 240

Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
            D G Y C A N  G       + +    PE     ++ Y      +   C+  G P P 
Sbjct: 241 EDEGFYECLAGNLRGRNLAKGQL-IFYAPPEWEHKIQNTYLSIYDNLYWECKASGKPNPW 299

Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
             W+ N + L       +E G L IT +  +DSG Y C A NK      +  L V     
Sbjct: 300 YTWLKNGERLNSEERIQIENGTLTITILNVSDSGVYQCAAENKYQIIYANAELRVLASAP 359

Query: 309 HITDQP--EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
             +  P  +   V+ G   +  C   + P  + +I W RGSE        R     D SL
Sbjct: 360 DFSKSPIKKISIVQIGGDISIECKPNAFP--RAAISWKRGSE--SLRQSKRVFLLEDGSL 415

Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV------ 420
            +   +  D+G YTC A  +    +   +L V+         T+I V  +K  V      
Sbjct: 416 KIHNVTRSDAGPYTCIATNQFGIAKNTGSLIVK-------ERTIITVPPSKMDVTVGESI 468

Query: 421 -----VSWNP----VSPQSLRGHFRGYKVQT-WTEKDGEGSIRELIVNKGESTTTEVDKF 470
                VS +P    V   S  G+    + Q    EK G  S+ +L++   + + +   K+
Sbjct: 469 VLPCQVSHDPSIEVVFAWSFNGNIIDLQKQVAHFEKIGGESVGDLMIRNIQLSHS--GKY 526

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
           +   +     L+            ++ +   G PG  + +    + S+   + W      
Sbjct: 527 LCTVRTTLERLS-----------AVADIIVRGPPGPPEDVRVEHISSTTSQISWRPGPDN 575

Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
           N  +  + +  Q+     VG   +  +P I +  T +A + GL    +Y   +      G
Sbjct: 576 NSPIQIFTV--QTRTPFSVGWQAVATVPEILNGQTYNATVVGLSSWVEYEFRVVAGNSIG 633

Query: 590 DGAESK------YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
            G  SK          VP   P N+ G G     LVI+W ++PE   N   F Y + +R 
Sbjct: 634 IGEPSKPSKLLRTKASVPVLAPVNINGGGGGRYELVITWESIPEELQNGEGFGYIVMFRP 693

Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
             +  AW ++ V     S+ V  N+      P+E+KV       +GEG +  + IV  GE
Sbjct: 694 VGS-TAWTKERVPLVESSKFVYRNESIMPLSPFEVKV--GVYNNEGEGPLSTVSIVYSGE 750



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 150/643 (23%), Positives = 250/643 (38%), Gaps = 89/643 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W K+G  +N  +RI   N   +L I  +  SD G Y C   N   +  
Sbjct: 290 CKASGKPNPWYTWLKNGERLNSEERIQIEN--GTLTITILNVSDSGVYQCAAENKY-QII 346

Query: 115 SYSIDLSVLA-APYFTVEP-EFINAAE-EETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
             + +L VLA AP F+  P + I+  +    ++ ECK +  P   I W    + + Q+  
Sbjct: 347 YANAELRVLASAPDFSKSPIKKISIVQIGGDISIECKPNAFPRAAISWKRGSESLRQSKR 406

Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
               + G   + I N+ +SD G Y C ATN  G + K+    ++     IT  P      
Sbjct: 407 VFLLEDG--SLKIHNVTRSDAGPYTCIATNQFG-IAKNTGSLIVKERTIITVPPSKMDVT 463

Query: 232 DGKTVVLTCRVFGAPKPEV--------NWIHNQKELT-----GGRYTILETGDLKITDVA 278
            G+++VL C+V   P  EV        N I  QK++      GG       GDL I ++ 
Sbjct: 464 VGESIVLPCQVSHDPSIEVVFAWSFNGNIIDLQKQVAHFEKIGGE----SVGDLMIRNIQ 519

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT----FRCNAVSD 334
            + SG+Y C  R  L        + V+        PED  VE   S T    +R    ++
Sbjct: 520 LSHSGKYLCTVRTTLERLSAVADIIVRGPP---GPPEDVRVEHISSTTSQISWRPGPDNN 576

Query: 335 PSLKLSIVWLRGSEPIDFESE---PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
             +++  V  R    + +++    P  +    Y+ TV   S     ++   A   +   E
Sbjct: 577 SPIQIFTVQTRTPFSVGWQAVATVPEILNGQTYNATVVGLSSWVEYEFRVVAGNSIGIGE 636

Query: 392 AQA-----TLTVQVPLEAPSNFTLIQVIDAK-----KAVVSWNPVSPQSLRGHFRGYKVQ 441
                        VP+ AP N      I+       + V++W  +  +   G   GY V 
Sbjct: 637 PSKPSKLLRTKASVPVLAPVN------INGGGGGRYELVITWESIPEELQNGEGFGYIVM 690

Query: 442 -------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
                   WT++          V + ES        +P S    +V  +N    GP S +
Sbjct: 691 FRPVGSTAWTKERVPLVESSKFVYRNES-------IMPLSPFEVKVGVYNNEGEGPLSTV 743

Query: 495 ISFVTPEGVP------GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKG 546
               + E  P       ++QS  A  +  S   + W    +  G ++GY++ Y     K 
Sbjct: 744 SIVYSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDSKE 800

Query: 547 TKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----P 601
           + +G +            T+  + GL+ +T Y   +  Y  AG G  S  +        P
Sbjct: 801 SIIGKIR------VSGNVTNKSITGLKANTVYFASVRAYNTAGTGPSSLPVNVTTKKSPP 854

Query: 602 FKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
            + P N+  + S  + L ++W  +  +E+ +    Y+I +R++
Sbjct: 855 SQPPANIAWKLSN-SKLCLNWEHVKTMENESEVLGYKILYRQN 896



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 14/190 (7%)

Query: 409 TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
           T +Q   A +  VSWN ++     G   GY+V  WT+   E  I ++ V+ G  T   + 
Sbjct: 760 TSLQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESIIGKIRVS-GNVTNKSIT 818

Query: 469 KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VK 526
                +  FA V A+N A  GP S  ++  T +  P    +  A  L +S   L W  VK
Sbjct: 819 GLKANTVYFASVRAYNTAGTGPSSLPVNVTTKKSPPSQPPANIAWKLSNSKLCLNWEHVK 878

Query: 527 PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGY 585
             +    ++GYKI Y+  + +K         +I +   TSA+L  L P    Y I +   
Sbjct: 879 TMENESEVLGYKILYRQNRQSKT--------HILETNNTSAEL--LVPFEEDYLIEIRTV 928

Query: 586 TKAGDGAESK 595
           +  GDG+ S+
Sbjct: 929 SDGGDGSSSE 938


>gi|158564331|sp|Q64605.2|PTPRS_RAT RecName: Full=Receptor-type tyrosine-protein phosphatase S;
           Short=R-PTP-S; AltName: Full=Leukocyte common
           antigen-related protein-tyrosine phosphatase 2;
           Short=LAR-PTP2; AltName: Full=Receptor-type
           tyrosine-protein phosphatase sigma; Short=R-PTP-sigma;
           Flags: Precursor
 gi|76779324|gb|AAI05754.1| Ptprd protein [Rattus norvegicus]
          Length = 1907

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 174/656 (26%), Positives = 275/656 (41%), Gaps = 55/656 (8%)

Query: 15  ILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI 74
           + L ++A G  A +    P +     K ++ +        C   G P P+  W+K G  +
Sbjct: 18  LFLVLLARGCLAEE----PPRFIREPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKV 73

Query: 75  NPSDRISQGNY----GKSLIIKHVEF-SDQGSYTCEVSNGVGEAKSYSIDLSVL------ 123
           N S R    ++    G  L I+ +    D+  Y C   N VGE   ++  L+VL      
Sbjct: 74  N-SQRFETIDFDESSGAVLRIQPLRTPRDENVYECVAQNSVGEITVHA-KLTVLREDQLP 131

Query: 124 -AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPR-RKVGPNR 181
              P   + P+        T T  C ASG P+PEI W  +  P+  +  N R +++    
Sbjct: 132 PGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGA 191

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYK---DVYVNVLAHAPEITEAPKDEYTVDGKTVVL 238
           + IE+  ++D G Y C ATNS G  Y    ++YV V   AP  +  P     + G  V +
Sbjct: 192 LQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVRRVAPRFSILPMSHEIMPGGNVNI 251

Query: 239 TCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
           TC   G+P P V W+   ++LT      +    L++TDV   DS  YTC A + LG  + 
Sbjct: 252 TCVAVGSPMPYVKWMQGAEDLTPEDDMPVGRNVLELTDV--KDSANYTCVAMSSLGVIEA 309

Query: 299 SGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE--PIDFESEP 356
              +TVK        P   E  A        +   DP     I +   S+  P   + + 
Sbjct: 310 VAQITVKSLPKAPGTPVVTENTATSITVTWDSGNPDPVSYYVIEYKSKSQDGPYQIKED- 368

Query: 357 RFVQSNDYSL-TVTKSSELDSGQYTCRAQTELDFIEAQATLT-VQVPLEAPSNFTLIQVI 414
             + +  YS+  ++ +SE +       +  +    E+  T T  Q P  AP N    +++
Sbjct: 369 --ITTTRYSIGGLSPNSEYEIWVSAVNSIGQGPPSESVVTRTGEQAPASAPRNVQ-ARML 425

Query: 415 DAKKAVVSW-NPVSPQSLRGHFRGYKVQTWTEKDGE-GSIRELIVNKGESTTTEVDKFVP 472
            A   +V W  PV P  L    RGY+V    E +   G+ ++   N  +S  T V   + 
Sbjct: 426 SATTMIVQWEEPVEPNGL---IRGYRVYYTMEPEHPVGNWQKH--NVDDSLLTTVGSLLE 480

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
                 RVLAF    +GP S+ I   T +GVPG   +L A     ++  L W  P Q + 
Sbjct: 481 DETYTVRVLAFTSVGDGPLSDPIQVKTQQGVPGQPMNLRAEAKSETSIGLSWSAPRQES- 539

Query: 533 VLMGYKIKY-QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            ++ Y++ + +  +G +VG          DPTT    +  L+P+T+Y   LA  +  G G
Sbjct: 540 -VIKYELLFREGDRGREVGRTF-------DPTTAFV-VEDLKPNTEYAFRLAARSPQGLG 590

Query: 592 A-----ESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           A       + L   P   P +V+        +++SW   P   HN     Y + +R
Sbjct: 591 AFTAVVRQRTLQAKPSAPPQDVKCTSLRSTAILVSWRPPPPETHNGALVGYSVRYR 646



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 144/550 (26%), Positives = 230/550 (41%), Gaps = 57/550 (10%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR-------KVG 178
           P F  EP+          +F C+A+G P+P + W   GK +     N +R       +  
Sbjct: 33  PRFIREPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKV-----NSQRFETIDFDESS 87

Query: 179 PNRITIENLRK-SDTGNYGCNATNSLGYVYKDVYVNVLAHA------PEITEAPKDEYTV 231
              + I+ LR   D   Y C A NS+G +     + VL         P I   P+ +   
Sbjct: 88  GAVLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLREDQLPPGFPNIDMGPQLKVVE 147

Query: 232 DGKTVVLTCRVFGAPKPEVNWIHN----QKELTGGRYTILETGDLKITDVAFADSGEYTC 287
             +T  + C   G P PE+ W  +        + GR   L +G L+I      D G+Y C
Sbjct: 148 RTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYEC 207

Query: 288 FARNKLGTAQGS-GSLTVKEHT---HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVW 343
            A N  G    S  +L V+        +  P  +E+  G +    C AV  P     + W
Sbjct: 208 VATNSAGVRYSSPANLYVRVRRVAPRFSILPMSHEIMPGGNVNITCVAVGSP--MPYVKW 265

Query: 344 LRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE 403
           ++G+E +  E +   V  N   LT  K    DS  YTC A + L  IEA A +TV+   +
Sbjct: 266 MQGAEDLTPEDD-MPVGRNVLELTDVK----DSANYTCVAMSSLGVIEAVAQITVKSLPK 320

Query: 404 APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGEST 463
           AP    ++    A    V+W+  +P  +  +   YK ++   +DG   I+E I     +T
Sbjct: 321 APGT-PVVTENTATSITVTWDSGNPDPVSYYVIEYKSKS---QDGPYQIKEDIT----TT 372

Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYL 522
              +    P S+    V A N    GPPSE +   T E  P +  ++++A  L ++   +
Sbjct: 373 RYSIGGLSPNSEYEIWVSAVNSIGQGPPSESVVTRTGEQAPASAPRNVQARMLSATTMIV 432

Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
           +W +P +PNG++ GY++ Y       VG   +    + D   T+  +  L     Y + +
Sbjct: 433 QWEEPVEPNGLIRGYRVYYTMEPEHPVGNWQKH--NVDDSLLTT--VGSLLEDETYTVRV 488

Query: 583 AGYTKAGDGAES-----KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKY 637
             +T  GDG  S     K    VP   P N+     +  ++ +SW+A P  E      KY
Sbjct: 489 LAFTSVGDGPLSDPIQVKTQQGVP-GQPMNLRAEAKSETSIGLSWSA-PRQESV---IKY 543

Query: 638 RIFWRRHNTG 647
            + +R  + G
Sbjct: 544 ELLFREGDRG 553



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 178/712 (25%), Positives = 274/712 (38%), Gaps = 102/712 (14%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS---DRISQGNYGKSLIIKHVEFSDQ 99
           +V  R +   + C   G P P+  W KD +P++PS    RI Q   G +L I+  E +DQ
Sbjct: 144 KVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSG-ALQIESSEETDQ 202

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLA---APYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           G Y C  +N  G   S   +L V     AP F++ P          V   C A G P P 
Sbjct: 203 GKYECVATNSAGVRYSSPANLYVRVRRVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPY 262

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV--YKDVYVNV 214
           + W+   + ++   P     VG N + + +++  D+ NY C A +SLG +     + V  
Sbjct: 263 VKWMQGAEDLT---PEDDMPVGRNVLELTDVK--DSANYTCVAMSSLGVIEAVAQITVKS 317

Query: 215 LAHAPE---ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETG 270
           L  AP    +TE      TV   +        G P P   ++   K  +  G Y I E  
Sbjct: 318 LPKAPGTPVVTENTATSITVTWDS--------GNPDPVSYYVIEYKSKSQDGPYQIKE-- 367

Query: 271 DLKITDVA---FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
           D+  T  +    + + EY  +        QG  S +V   T           +A  SA  
Sbjct: 368 DITTTRYSIGGLSPNSEYEIWVSAVNSIGQGPPSESVVTRTG---------EQAPASAPR 418

Query: 328 RCNAVSDPSLKLSIVWLRGSEP--------IDFESEPRFVQSN------DYSLTVTKSSE 373
              A    +  + + W    EP        + +  EP     N      D SL  T  S 
Sbjct: 419 NVQARMLSATTMIVQWEEPVEPNGLIRGYRVYYTMEPEHPVGNWQKHNVDDSLLTTVGSL 478

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRG 433
           L+   YT R    L F     T     PL  P     IQV   ++ V    P  P +LR 
Sbjct: 479 LEDETYTVRV---LAF-----TSVGDGPLSDP-----IQV-KTQQGV----PGQPMNLRA 520

Query: 434 HFRGYKV--QTWTEKDGEGSIR-ELIVNKGE-----------STTTEVDKFVPASKNFAR 479
             +       +W+    E  I+ EL+  +G+           +T   V+   P ++   R
Sbjct: 521 EAKSETSIGLSWSAPRQESVIKYELLFREGDRGREVGRTFDPTTAFVVEDLKPNTEYAFR 580

Query: 480 VLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKWVKP--EQPNGVLMG 536
           + A +    G  + ++   T +  P    Q ++   L S+A  + W  P  E  NG L+G
Sbjct: 581 LAARSPQGLGAFTAVVRQRTLQAKPSAPPQDVKCTSLRSTAILVSWRPPPPETHNGALVG 640

Query: 537 YKIKYQSVKGTKVGPL-LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK 595
           Y ++Y+ +      P  +  +P    PTTT   L  LE  T+YR+    YT+ G G ES 
Sbjct: 641 YSVRYRPLGSEDPDPKEVNNIP----PTTTQILLEALEKWTEYRVTAVAYTEVGPGPESS 696

Query: 596 YLFY-----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
            +       VP   P  VE        + + W +      +     Y++ + R    EA 
Sbjct: 697 PVVVRTDEDVPSAPPRKVEAEALNATAIRVLWRSPTPGRQHGQIRGYQVHYVRMEGAEAR 756

Query: 651 NQ---DDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKG 699
                 D++     E+V+ N      Y I V     + DG  S  +++V KG
Sbjct: 757 GPPRIKDIMLADAQEMVITNLQPETAYSITVAAYTMKGDGARSKPKVVVTKG 808


>gi|189240804|ref|XP_001811323.1| PREDICTED: similar to sdk-P1 [Tribolium castaneum]
          Length = 2168

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 160/593 (26%), Positives = 243/593 (40%), Gaps = 94/593 (15%)

Query: 53  LFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGN-YGKSLIIKHVEFSDQGSYTCEVSNG 109
           L CI    PL +  T+W KD + I      S  + + +SL +  V  +  G Y C V   
Sbjct: 256 LDCIANARPLHELETLWFKDDILIENGGMYSLNDIWNRSLTLISVNTTQSGQYECRV--- 312

Query: 110 VGEAKSYSIDLSVLAAPYFTV--EPEFINAAEEET-------VTFECKASGLPEPEIHWV 160
               +S   D +V A    TV  +P F++A   ET       ++  C   G+P+P + W 
Sbjct: 313 --RLRSERFD-TVTAKAIVTVLEKPRFVSATRAETLGEYGTPISLPCDVVGIPKPNVTWY 369

Query: 161 HNGKPISQAPPNPRRKV--GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
            N + +       +R V    N + I+ L  +D+G + C A +  G      ++ V    
Sbjct: 370 KNSQEVDLTD---KRYVLEEDNSLRIKKLLINDSGMFQCFAKSEAGESSISTWLKVKTAG 426

Query: 219 PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDV 277
           P +   P++   +DGK   L CR  GAP P + W +    + T  R  IL+TGDL I  V
Sbjct: 427 PVMELGPQNATVLDGKDATLACRAVGAPTPNITWFYKGDLIETSSRVQILDTGDLLIAAV 486

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
             +D G YTC   N+ G  +GS  L V   T I   P D  V  G +AT +C   SDP++
Sbjct: 487 KESDVGMYTCLRANEAGEVRGSAHLGVLVRTQIIQPPVDTRVLLGHTATLQCKISSDPAV 546

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
              + W +  + ++ ++  R     D +L +      D G YTC  ++        A L+
Sbjct: 547 PFDLRWYKNKQALNPKASSRISILKDGTLEIQAVRAADVGLYTCSIKSPGGNETRSAKLS 606

Query: 398 VQVPLEAPSNFTLIQVIDA-KKAV-VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIREL 455
           V     AP+N    ++  A ++AV VSW P           G+        DG   I++ 
Sbjct: 607 VIELPYAPTNVKAERLDTASQRAVNVSWIP-----------GF--------DGNSPIKQF 647

Query: 456 IVNKGE------------------STTTEVDKFV-------PASKNFARVLAFNGAYNGP 490
           I+ K E                  S  +   +++        A+  F RV A N    G 
Sbjct: 648 IIQKRELPELGPIPDPLLNWVTELSNVSAEQRWILLTNLKAAAAYQF-RVSAVNSVGEGS 706

Query: 491 PSE-----IISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQ 542
           PSE     ++    P G P G V S  +    SS    +W  P  E  NG ++GY I+Y+
Sbjct: 707 PSEPSNQVMLPQEAPSGPPVGFVGSARS----SSEIITQWQPPLEEHRNGQILGYIIRYK 762

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAK----LAGLEPSTKYRIHLAGYTKAGDG 591
               T         P+I    T  A+    +  L     Y + +A Y   G G
Sbjct: 763 LFGYTNS-------PWIVQNITNEAQRNYLIQDLITWKDYIVQIAAYNNKGVG 808



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 152/611 (24%), Positives = 256/611 (41%), Gaps = 48/611 (7%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P+    TR + +      + L C   G P P   W K+   ++ +D+        SL IK
Sbjct: 334 PRFVSATRAETLGEYGTPISLPCDVVGIPKPNVTWYKNSQEVDLTDKRYVLEEDNSLRIK 393

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASG 151
            +  +D G + C   +  GE+ S S  L V  A P   + P+     + +  T  C+A G
Sbjct: 394 KLLINDSGMFQCFAKSEAGES-SISTWLKVKTAGPVMELGPQNATVLDGKDATLACRAVG 452

Query: 152 LPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVY 211
            P P I W + G  I  +  +  + +    + I  +++SD G Y C   N  G V    +
Sbjct: 453 APTPNITWFYKGDLIETS--SRVQILDTGDLLIAAVKESDVGMYTCLRANEAGEVRGSAH 510

Query: 212 VNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKEL---TGGRYTI 266
           + VL    +I + P D   + G T  L C++   P    ++ W  N++ L      R +I
Sbjct: 511 LGVLVRT-QIIQPPVDTRVLLGHTATLQCKISSDPAVPFDLRWYKNKQALNPKASSRISI 569

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
           L+ G L+I  V  AD G YTC  ++  G    S  L+V E  +    P + + E   +A+
Sbjct: 570 LKDGTLEIQAVRAADVGLYTCSIKSPGGNETRSAKLSVIELPY---APTNVKAERLDTAS 626

Query: 327 FRCNAVS-------DPSLKLSIVWLR-----GSEP---IDFESEPRFVQSNDYSLTVTKS 371
            R   VS       +  +K  I+  R     G  P   +++ +E   V +    + +T  
Sbjct: 627 QRAVNVSWIPGFDGNSPIKQFIIQKRELPELGPIPDPLLNWVTELSNVSAEQRWILLTNL 686

Query: 372 SELDSGQYTCRAQTEL-DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKA---VVSWNPVS 427
               + Q+   A   + +   ++ +  V +P EAPS   +  V  A+ +   +  W P  
Sbjct: 687 KAAAAYQFRVSAVNSVGEGSPSEPSNQVMLPQEAPSGPPVGFVGSARSSSEIITQWQPPL 746

Query: 428 PQSLRGHFRGYKVQ-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
            +   G   GY ++           I + I N+ +     +   +       ++ A+N  
Sbjct: 747 EEHRNGQILGYIIRYKLFGYTNSPWIVQNITNEAQRNYL-IQDLITWKDYIVQIAAYNNK 805

Query: 487 YNGPPSEIISFVTPEGVPGTVQSLE-AIPLGSSAFYLKWV--KPEQPNGVLMGYKIKYQS 543
             G  +E     T EGVP     ++  +PL S+   + W    P++ NG+  GYKI  Q+
Sbjct: 806 GVGVFTEGARIKTKEGVPEAPPIIQTVVPLNSTTIQITWKPPDPQKINGINQGYKI--QA 863

Query: 544 VKGTKVGPLLERL-----PYISDPTT-TSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL 597
            +  K G L E       P + DP    +A + GLE  T Y + +  +T  GDG  S+  
Sbjct: 864 WQTDKNGDLFEAKMITVHPNLLDPNQEQTALMTGLEKFTDYNVTVLCFTDPGDGEISE-- 921

Query: 598 FYVPFKNPDNV 608
            +VP K  ++V
Sbjct: 922 -FVPVKTKEDV 931



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 142/606 (23%), Positives = 239/606 (39%), Gaps = 90/606 (14%)

Query: 46   LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
            L  K   L C   G P P   W   G  I  S R+   + G  L+I  V+ SD G YTC 
Sbjct: 439  LDGKDATLACRAVGAPTPNITWFYKGDLIETSSRVQILDTG-DLLIAAVKESDVGMYTCL 497

Query: 106  VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEP--EIHWVHNG 163
             +N  GE +  S  L VL        P         T T +CK S  P    ++ W  N 
Sbjct: 498  RANEAGEVRG-SAHLGVLVRTQIIQPPVDTRVLLGHTATLQCKISSDPAVPFDLRWYKNK 556

Query: 164  KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAPEI 221
            + ++    +    +    + I+ +R +D G Y C+  +  G   +   ++V  L +AP  
Sbjct: 557  QALNPKASSRISILKDGTLEIQAVRAADVGLYTCSIKSPGGNETRSAKLSVIELPYAPTN 616

Query: 222  TEAPKDEYT------------VDG----KTVVLTCRVFG----APKPEVNWIHNQKELTG 261
             +A + +               DG    K  ++  R        P P +NW+     ++ 
Sbjct: 617  VKAERLDTASQRAVNVSWIPGFDGNSPIKQFIIQKRELPELGPIPDPLLNWVTELSNVSA 676

Query: 262  GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA 321
             +  IL      +T++  A + ++   A N +G  +GS S    +     + P    V  
Sbjct: 677  EQRWIL------LTNLKAAAAYQFRVSAVNSVG--EGSPSEPSNQVMLPQEAPSGPPVGF 728

Query: 322  GQSATFRCNAVSD--PSLKLS-----IVWLRGSEPIDFESEPRFVQS------------- 361
              SA      ++   P L+       + ++   +   + + P  VQ+             
Sbjct: 729  VGSARSSSEIITQWQPPLEEHRNGQILGYIIRYKLFGYTNSPWIVQNITNEAQRNYLIQD 788

Query: 362  ----NDYSLTVTKSSELDSGQYT--CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVID 415
                 DY + +   +    G +T   R +T+    EA   +   VPL    N T IQ+  
Sbjct: 789  LITWKDYIVQIAAYNNKGVGVFTEGARIKTKEGVPEAPPIIQTVVPL----NSTTIQI-- 842

Query: 416  AKKAVVSWNPVSPQSLRGHFRGYKVQTW-TEKDGEGSIRELIV---------NKGESTTT 465
                  +W P  PQ + G  +GYK+Q W T+K+G+    ++I           +  +  T
Sbjct: 843  ------TWKPPDPQKINGINQGYKIQAWQTDKNGDLFEAKMITVHPNLLDPNQEQTALMT 896

Query: 466  EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWV 525
             ++KF   +     VL F    +G  SE +   T E VP  V +L+   +   A  + W 
Sbjct: 897  GLEKFTDYN---VTVLCFTDPGDGEISEFVPVKTKEDVPDEVSNLQFDDISDRAVKVIWQ 953

Query: 526  KPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
             P+  NG+L GY+I+YQ     +  P   ++  ++   T S K+  L+ +T Y+  +  +
Sbjct: 954  PPKHINGILTGYQIRYQ----IRDKPDTVKIKNLT-ADTLSLKVTDLQATTHYKFEVTAW 1008

Query: 586  TKAGDG 591
            T  G G
Sbjct: 1009 TAMGAG 1014



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 145/359 (40%), Gaps = 44/359 (12%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P PQ  W KD VPI      S   Y K +   H    D+GSY C  +N +G   
Sbjct: 69  CQAFGNPSPQFRWLKDWVPIT---EFSTDAYYKIISASH---KDEGSYRCIAANKIGSI- 121

Query: 115 SYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGL--------PEPEIHWVHNGKPI 166
             S ++ +L A Y  V   F +  E+     E +A+ L        P+PE+ W      +
Sbjct: 122 -LSEEMKILVA-YMKV---FEDQTEKSESVVEGQAAILNLPEIESKPKPEVTWHTESGQL 176

Query: 167 SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSL-GYVYKDVYVNVLAH-------- 217
             A    + K   N++ I +  KSD   Y   A N+  G      ++ +           
Sbjct: 177 PYAQKYAKSK--SNQLIILSTDKSDQKAYRARAINTQEGKEENSAFIRLTVQESSDHKEI 234

Query: 218 APEITEAPKDEYTVDGKT-VVLTCRVFGAPKPEVNWIHNQKEL---TGGRYTILETGD-- 271
           AP+I   P+D   V G     L C     P  E+  +  + ++    GG Y++ +  +  
Sbjct: 235 APQIIVPPEDVKIVRGTAQTTLDCIANARPLHELETLWFKDDILIENGGMYSLNDIWNRS 294

Query: 272 LKITDVAFADSGEYTCFAR---NKLGTAQGSGSLTVKEHTHITDQPEDYEV-EAGQSATF 327
           L +  V    SG+Y C  R    +  T      +TV E            + E G   + 
Sbjct: 295 LTLISVNTTQSGQYECRVRLRSERFDTVTAKAIVTVLEKPRFVSATRAETLGEYGTPISL 354

Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
            C+ V  P  K ++ W + S+ +D  ++ R+V   D SL + K    DSG + C A++E
Sbjct: 355 PCDVVGIP--KPNVTWYKNSQEVDL-TDKRYVLEEDNSLRIKKLLINDSGMFQCFAKSE 410



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 119/281 (42%), Gaps = 27/281 (9%)

Query: 142 TVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATN 201
           T   +C+A G P P+  W+ +  PI++   +   K       I +    D G+Y C A N
Sbjct: 64  TKIIQCQAFGNPSPQFRWLKDWVPITEFSTDAYYK-------IISASHKDEGSYRCIAAN 116

Query: 202 SLGYVYKDVYVNVLAHAPEI-TEAPKDEYTVDGKTVVLTC-RVFGAPKPEVNWIHNQKEL 259
            +G +  +    ++A+      +  K E  V+G+  +L    +   PKPEV W     +L
Sbjct: 117 KIGSILSEEMKILVAYMKVFEDQTEKSESVVEGQAAILNLPEIESKPKPEVTWHTESGQL 176

Query: 260 T-GGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSG--SLTVKE---HTHITD 312
               +Y   ++  L I     +D   Y   A N + G  + S    LTV+E   H  I  
Sbjct: 177 PYAQKYAKSKSNQLIILSTDKSDQKAYRARAINTQEGKEENSAFIRLTVQESSDHKEIAP 236

Query: 313 Q----PEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
           Q    PED ++  G +  T  C A + P  +L  +W +    I+           + SLT
Sbjct: 237 QIIVPPEDVKIVRGTAQTTLDCIANARPLHELETLWFKDDILIENGGMYSLNDIWNRSLT 296

Query: 368 VTKSSELDSGQYTCRAQT---ELDFIEAQATLTVQVPLEAP 405
           +   +   SGQY CR +      D + A+A +TV   LE P
Sbjct: 297 LISVNTTQSGQYECRVRLRSERFDTVTAKAIVTV---LEKP 334



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 10/153 (6%)

Query: 480  VLAFNGAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMG 536
            V+ FN    GP +  ++    E VP G  + LE   + S+   LKW   + +Q NG L+G
Sbjct: 1612 VVPFNSQGEGPATPPVTVYVGEAVPTGEPRDLEGEAVSSTEVRLKWKPPQQQQQNGELLG 1671

Query: 537  YKIKY---QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
            YKI Y    S +    G   E    +   T TS  L  L+  T+YRI +  +  AGDG  
Sbjct: 1672 YKIFYLVTNSPQDFDEGHKFEEEIEVIAATMTSHSLVFLDKYTEYRIQILAFNPAGDGPR 1731

Query: 594  SKYLFYVPFKN----PDNVEGRGSTPNNLVISW 622
            S+ +     +     P N+     T N+L++SW
Sbjct: 1732 SRPITVKTLQGLPGPPANLRFSDITMNSLLVSW 1764



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 9/182 (4%)

Query: 420  VVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTT-TEVDKFVPASKNFA 478
            VV W  V  +   G   GYKV    E       + +  N   +TT TE+ KFV       
Sbjct: 1247 VVKWGDVPKEHQNGLIEGYKVYYAAESKSPVQYKLIASNSTFTTTLTELRKFVVYR---I 1303

Query: 479  RVLAFNGAYNGPPSE-IISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
            +VLA+    +G PS+  +S  T E VPG   ++    +  ++  + W  PE+PNG ++ Y
Sbjct: 1304 QVLAYTRLGDGEPSKPAVSVRTFEDVPGPPSNVSFPDVSVTSARIIWDVPEEPNGEILAY 1363

Query: 538  KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL 597
            K+ Y            +  P    P+  + +   LEP   Y   +   T+ G G  +  L
Sbjct: 1364 KVTYHIDNVNVNNKYSKEFP----PSDRTFRFTQLEPEKYYMFSVTAQTRLGWGKTAHAL 1419

Query: 598  FY 599
             +
Sbjct: 1420 VF 1421



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 12/203 (5%)

Query: 397  TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
            T+Q P   P     ++ + A +  V W P+      G+ RGY +     + GE     + 
Sbjct: 1124 TIQAPPAHPPKNVTVRAMSATEVRVRWIPLQQIEWFGNPRGYSISYVEVRTGEKQTATID 1183

Query: 457  VNKGES-TTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPG-TVQSLEAIP 514
             +   S   T +++F     +         + +GP   +    T E VP     ++EA  
Sbjct: 1184 DHTANSHVITGLEEFALYEVSMQACNDVGCSMDGP---VALERTRESVPSFGPLNIEANA 1240

Query: 515  LGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGL 572
              S+   +KW  V  E  NG++ GYK+ Y +   + V     +   I+  +T +  L  L
Sbjct: 1241 TSSTTIVVKWGDVPKEHQNGLIEGYKVYYAAESKSPV-----QYKLIASNSTFTTTLTEL 1295

Query: 573  EPSTKYRIHLAGYTKAGDGAESK 595
                 YRI +  YT+ GDG  SK
Sbjct: 1296 RKFVVYRIQVLAYTRLGDGEPSK 1318



 Score = 45.8 bits (107), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 62/154 (40%), Gaps = 11/154 (7%)

Query: 233 GKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNK 292
           G T ++ C+ FG P P+  W+ +   +T            KI   +  D G Y C A NK
Sbjct: 62  GTTKIIQCQAFGNPSPQFRWLKDWVPIT----EFSTDAYYKIISASHKDEGSYRCIAANK 117

Query: 293 LGTAQGSGSLTVKEHTHI-TDQPEDYE-VEAGQSATFRCNAV-SDPSLKLSIVWLRGSEP 349
           +G+        +  +  +  DQ E  E V  GQ+A      + S P  K  + W   S  
Sbjct: 118 IGSILSEEMKILVAYMKVFEDQTEKSESVVEGQAAILNLPEIESKP--KPEVTWHTESGQ 175

Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
           + +    ++ +S    L +  + + D   Y  RA
Sbjct: 176 LPYAQ--KYAKSKSNQLIILSTDKSDQKAYRARA 207



 Score = 44.3 bits (103), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 40/67 (59%)

Query: 479  RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
            ++LAFN A +GP S  I+  T +G+PG   +L    +  ++  + W  P++ NG ++GY 
Sbjct: 1719 QILAFNPAGDGPRSRPITVKTLQGLPGPPANLRFSDITMNSLLVSWDPPKKRNGDIIGYL 1778

Query: 539  IKYQSVK 545
            + Y++ +
Sbjct: 1779 VTYETTE 1785


>gi|449490690|ref|XP_004175373.1| PREDICTED: LOW QUALITY PROTEIN: contactin-2 [Taeniopygia guttata]
          Length = 944

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 133/494 (26%), Positives = 217/494 (43%), Gaps = 28/494 (5%)

Query: 60  TPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSID 119
           +P+PQ  W+K   P +     S+      L I+H  F D+G+Y CE  N  G   ++   
Sbjct: 384 SPVPQIKWTKLDGPQSSKWIGSE----PXLQIQHAGFDDEGTYECEAENAKGR-DTHQGR 438

Query: 120 LSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGP 179
           + + A P +        A     + + C ASG P P + W+ + +P++      R +V  
Sbjct: 439 IIIHAQPDWLDVISDTEADIGSDLRWSCVASGKPRPTVRWLRDEQPLTS---QNRIEVSG 495

Query: 180 NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKT--VV 237
            R     L   D+G Y C A N  G VY    + V A AP+    P        ++  V+
Sbjct: 496 WRAEFSKLVLEDSGMYQCVAENKHGTVYASAELTVQALAPDFRLNPVKRLIPAARSGKVI 555

Query: 238 LTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTA 296
           + C+   APK  V W    + L    R TI   G L + +++ +D G+YTCFA N +G A
Sbjct: 556 IPCQPRAAPKATVLWTKGTELLVNSSRVTITADGTLILQNISKSDEGKYTCFAENFMGKA 615

Query: 297 QGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFE-SE 355
             +G L+V++ T IT  P   ++  G++ T +C+A  DP++ L+  W     PIDF+ SE
Sbjct: 616 NSTGILSVRDATKITLAPSSADINVGENLTLQCHASHDPTMDLTFTWSLDDFPIDFDKSE 675

Query: 356 PRFVQSNDYSLT----VTKSSELDSGQYTCRA-QTELDFIEAQATLTVQVPLEAPSNFTL 410
             + +++   L      ++     SG +      +++   EA+       P  AP     
Sbjct: 676 GHYRRASACELIPWMDTSRVWPATSGNWGASLPSSKIRTKEAE-------PKAAPYRVIA 728

Query: 411 IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKF 470
             V+ ++   VSW PV    + G   GY+++ W + D E +  + +   G  T+  V   
Sbjct: 729 KSVLSSEMD-VSWEPVEQGEMTGVLLGYEIRYWKDGDKEEAA-DRVRTAGLVTSARVTGL 786

Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPE 528
            P +     V A+N A  GPPS   +  T    P       +     S   +KW  V  +
Sbjct: 787 NPNTDYHVSVRAYNRAGTGPPSPATNVTTTRPPPKRPPGNISWTFSGSTVSIKWDPVVAK 846

Query: 529 QPNGVLMGYKIKYQ 542
                + GYK+ Y+
Sbjct: 847 ADESAVTGYKMLYR 860



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 123/278 (44%), Gaps = 11/278 (3%)

Query: 86  GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVT 144
           G  +I   V   + GSY C   N  G   S    L       F+ E  + +   E   V 
Sbjct: 82  GDLVISNPVTSKEYGSYQCVAFNSRGTWVSMEASLRFGFLQEFSAEERDPVKITEGWGVM 141

Query: 145 FECKAS-GLPEPEIHWVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATN 201
           F C      P     W+ N  P +  P + RR +      + I     SD GNY C AT+
Sbjct: 142 FTCSPPPHYPGLSYRWLLNEFP-NFIPADGRRFISQTTGNLYIAKTEASDLGNYSCFATS 200

Query: 202 SLGYVYKDVY-----VNVLAHA-PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
            + ++ K V+     +++ A A P+  +   D     G  +  +C   G P+P V W+ +
Sbjct: 201 HIDFITKSVFSKFSRLSLAAEAQPDWLDVISDTEADIGSDLRWSCVASGKPRPTVRWLRD 260

Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE 315
            + LT      +  G+L+ + +   DSG Y C A NK GT   S  LTV++ T IT  P 
Sbjct: 261 GQPLTSQNRIEVSGGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQDATKITLAPS 320

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFE 353
             ++  G++ T +C+A  DP++ L+  W     PIDF+
Sbjct: 321 SADINVGENLTLQCHASHDPTMDLTFTWSLDDFPIDFD 358



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 137/587 (23%), Positives = 229/587 (39%), Gaps = 70/587 (11%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C+  G P P   W +DG P+   +RI     G  L    +   D G Y C   N  G   
Sbjct: 245 CVASGKPRPTVRWLRDGQPLTSQNRIEVS--GGELRFSKLVLEDSGMYQCVAENKHGTVY 302

Query: 115 SYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI--HWVHNGKPIS----- 167
           + S +L+V  A   T+ P   +    E +T +C AS  P  ++   W  +  PI      
Sbjct: 303 A-SAELTVQDATKITLAPSSADINVGENLTLQCHASHDPTMDLTFTWSLDDFPIDFDKSE 361

Query: 168 -----------QAPPNPRRKV-------------GPNR---------ITIENLRKSDTGN 194
                       +P +P R               GP           + I++    D G 
Sbjct: 362 GHYRRASAGPELSPGSPDRLFRSPVPQIKWTKLDGPQSSKWIGSEPXLQIQHAGFDDEGT 421

Query: 195 YGCNATNSLGYVYKDVYV-NVLAHA-PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNW 252
           Y C A N+ G   +D +   ++ HA P+  +   D     G  +  +C   G P+P V W
Sbjct: 422 YECEAENAKG---RDTHQGRIIIHAQPDWLDVISDTEADIGSDLRWSCVASGKPRPTVRW 478

Query: 253 IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HIT 311
           + +++ LT      +     + + +   DSG Y C A NK GT   S  LTV+       
Sbjct: 479 LRDEQPLTSQNRIEVSGWRAEFSKLVLEDSGMYQCVAENKHGTVYASAELTVQALAPDFR 538

Query: 312 DQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKS 371
             P    + A +S           + K +++W +G+E +   S  R   + D +L +   
Sbjct: 539 LNPVKRLIPAARSGKVIIPCQPRAAPKATVLWTKGTELLVNSS--RVTITADGTLILQNI 596

Query: 372 SELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
           S+ D G+YTC A+  +    +   L+V+       + T I +  +   +     ++ Q  
Sbjct: 597 SKSDEGKYTCFAENFMGKANSTGILSVR-------DATKITLAPSSADINVGENLTLQCH 649

Query: 432 RGHFRGYKVQ-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGP 490
             H     +  TW+  D      +   +   ++  E+  ++  S+ +       GA + P
Sbjct: 650 ASHDPTMDLTFTWSLDDFPIDFDKSEGHYRRASACELIPWMDTSRVWPATSGNWGA-SLP 708

Query: 491 PSEI-ISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQ--PNGVLMGYKIKYQSVKGT 547
            S+I      P+  P  V +   +   SS   + W   EQ    GVL+GY+I+Y      
Sbjct: 709 SSKIRTKEAEPKAAPYRVIAKSVL---SSEMDVSWEPVEQGEMTGVLLGYEIRYWKDGDK 765

Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
           +      R   +     TSA++ GL P+T Y + +  Y +AG G  S
Sbjct: 766 EEAADRVRTAGL----VTSARVTGLNPNTDYHVSVRAYNRAGTGPPS 808



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 119/295 (40%), Gaps = 37/295 (12%)

Query: 126 PYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
           P F  +P    F   + EE VT  C+A   P P  +     + +   P +  R V  + +
Sbjct: 32  PVFEEQPSHTLFPEGSAEEKVTLACRARANP-PATY-----RKLKLDPESRYRLVSGDLV 85

Query: 183 TIENLRKSDTGNYGCNATNSLG-YVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTC 240
               +   + G+Y C A NS G +V  +  +       E +   +D   + +G  V+ TC
Sbjct: 86  ISNPVTSKEYGSYQCVAFNSRGTWVSMEASLR-FGFLQEFSAEERDPVKITEGWGVMFTC 144

Query: 241 RVFGAPKPEV-----NWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARN 291
               +P P        W+ N+        G R+    TG+L I     +D G Y+CFA +
Sbjct: 145 ----SPPPHYPGLSYRWLLNEFPNFIPADGRRFISQTTGNLYIAKTEASDLGNYSCFATS 200

Query: 292 KLGTAQGSG-------SLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWL 344
            +     S        SL  +      D   D E + G    + C A   P  + ++ WL
Sbjct: 201 HIDFITKSVFSKFSRLSLAAEAQPDWLDVISDTEADIGSDLRWSCVASGKP--RPTVRWL 258

Query: 345 RGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
           R  +P+  ++    ++ +   L  +K    DSG Y C A+ +   + A A LTVQ
Sbjct: 259 RDGQPLTSQNR---IEVSGGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQ 310



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 75/194 (38%), Gaps = 16/194 (8%)

Query: 206 VYKDVYVNVLAHAPEITEAPKDEYTVDGKT---VVLTCRVFGAPKPEVNWIHNQKELTGG 262
           V+      + ++ P   E P      +G     V L CR    P      +    E    
Sbjct: 19  VWCQAQSGMRSYGPVFEEQPSHTLFPEGSAEEKVTLACRARANPPATYRKLKLDPE---S 75

Query: 263 RYTILETGDLKITD-VAFADSGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPED-YEV 319
           RY ++ +GDL I++ V   + G Y C A N  GT      SL        + +  D  ++
Sbjct: 76  RYRLV-SGDLVISNPVTSKEYGSYQCVAFNSRGTWVSMEASLRFGFLQEFSAEERDPVKI 134

Query: 320 EAGQSATFRCNAVSDPSL--KLSIVWLRGSEPIDFESE-PRFVQSNDYSLTVTKSSELDS 376
             G    F C   S P     LS  WL    P    ++  RF+     +L + K+   D 
Sbjct: 135 TEGWGVMFTC---SPPPHYPGLSYRWLLNEFPNFIPADGRRFISQTTGNLYIAKTEASDL 191

Query: 377 GQYTCRAQTELDFI 390
           G Y+C A + +DFI
Sbjct: 192 GNYSCFATSHIDFI 205


>gi|301613550|ref|XP_002936273.1| PREDICTED: contactin-2-like [Xenopus (Silurana) tropicalis]
          Length = 990

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 164/363 (45%), Gaps = 16/363 (4%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  + V L C   G P+P   W K    + P   +        L    + F + G+Y C
Sbjct: 243 ALYGQAVFLECFAFGNPVPHIRWRKVDGTLPPRLLV----IDPVLHFPSITFEEDGTYEC 298

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
           E  N  G + ++   + V A P +        A     + + C ASG P P I W+ +GK
Sbjct: 299 EAVNSEG-STTHQGRVIVQAQPEWLHVITDTEAKIGSDLLWSCAASGKPRPTIRWLRDGK 357

Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
           P+         ++   +I   +L   D+G Y C A N  G +Y    + V A AP+   +
Sbjct: 358 PLMT---QVNIEITNGQIKFTSLSLHDSGMYQCVAENKHGTIYTTAELTVQALAPDFRLS 414

Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
           P         G  V++ C    AP P + W    + L    R T+   G L + +++ +D
Sbjct: 415 PVKRLIPAARGGEVIIQCNPRAAPTPLILWSKGTELLFNSSRVTVTANGTLILRNISRSD 474

Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
            G+YTCFA N +G +  +G L+V+E T IT  P   ++  G S T +C+A  DPS+ L+ 
Sbjct: 475 EGKYTCFAENIMGKSNSTGVLSVREATKITLAPSGSDINQGDSITLQCHASHDPSMDLTF 534

Query: 342 VWLRGSEPIDFESEPRFVQSNDY-----SLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
            W     PIDFE E +  +          L +  +    +G+YTC AQT +D   A A+L
Sbjct: 535 TWTLNGIPIDFEKEAQNYRRTSMDEAVGDLHIINAQLRHAGKYTCMAQTVVDRTSAMASL 594

Query: 397 TVQ 399
            ++
Sbjct: 595 LIR 597



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 136/574 (23%), Positives = 214/574 (37%), Gaps = 56/574 (9%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W +DG P+     I   N    +    +   D G Y C   N  G   
Sbjct: 340 CAASGKPRPTIRWLRDGKPLMTQVNIEITN--GQIKFTSLSLHDSGMYQCVAENKHGTIY 397

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + + +L+V A AP F + P    I AA    V  +C     P P I W    + +  +  
Sbjct: 398 T-TAELTVQALAPDFRLSPVKRLIPAARGGEVIIQCNPRAAPTPLILWSKGTELLFNSS- 455

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA--HAPEITEAPKDE 228
             R  V  N  + + N+ +SD G Y C A N +G   K     VL+   A +IT AP   
Sbjct: 456 --RVTVTANGTLILRNISRSDEGKYTCFAENIMG---KSNSTGVLSVREATKITLAPSGS 510

Query: 229 YTVDGKTVVLTCRVFGAPKPEVN--WIHN------QKELTGGRYTILE--TGDLKITDVA 278
               G ++ L C     P  ++   W  N      +KE    R T ++   GDL I +  
Sbjct: 511 DINQGDSITLQCHASHDPSMDLTFTWTLNGIPIDFEKEAQNYRRTSMDEAVGDLHIINAQ 570

Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE-DYEVEAGQSATFRCNAVSDPSL 337
              +G+YTC A+  +       SL ++            Y  E     ++     +   +
Sbjct: 571 LRHAGKYTCMAQTVVDRTSAMASLLIRGPPGPPGGVVVKYVGETMVQLSWSRGFDNHSPI 630

Query: 338 KLSIVWLRGSEPI-----DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
              +V +R  EP+        ++P  V+ N  S  V   ++     +   A   L   + 
Sbjct: 631 SRYVVQVR--EPLTEIWRSARTDPPTVEGNAESALVVGLNQWTDYLFRIVASNILGDGDP 688

Query: 393 QATLTVQVPLEAPSNFTLIQVIDAKKA----VVSWNPVSPQSLRGHFRGYKV-------Q 441
            A   +    EA  N    +V     A     ++W P+  Q   G   GY +        
Sbjct: 689 SAPSALIRTREAAPNVAPSEVGGGGGAPNELTINWTPIGRQYQNGDDFGYIIAFKRKNEN 748

Query: 442 TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
           TW      G   +  V + ES    +  + P      ++  +N    GP S   +  + E
Sbjct: 749 TWLTVRVPGGQSQQYVYRNES----IAAYTPFD---VKIQGYNKKGEGPFSRDTTVYSAE 801

Query: 502 GVPGTVQS-LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560
             P    S ++A  + SS   + W   +   GVL+GY+I+Y      +      R    S
Sbjct: 802 EEPRMFPSEVKATAISSSDIEVAWNPVQTLKGVLLGYEIRYWKTSDKEAAADRVR----S 857

Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
               T+A +  L+P T Y + +  Y +AG G  S
Sbjct: 858 AGMATTAHVTSLKPDTTYYVTVRVYNQAGTGPSS 891



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 138/373 (36%), Gaps = 35/373 (9%)

Query: 49  KKVELFCIFGGTPLPQTIWSKDGVPIN----PSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           ++V L C    +P     W  +G  +N    PS R+  GN     I    +    G+Y C
Sbjct: 46  EQVTLPCRARASPSATYRWQLNGTELNLTADPSYRLVGGNLA---ISGPTQSKHAGTYQC 102

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECKA-SGLPEPEIHWVHN 162
             SN  G   S    L       F  E  + +   E   V   C      P     W+ N
Sbjct: 103 IASNPKGTVLSSEASLRFGYLQEFPAEQRDTVKVTEGWGVMLACNPPKHYPGLSYRWLLN 162

Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY--------- 211
             P      N RR V      + +    K D G Y C  T+ + +  K VY         
Sbjct: 163 EFPTFLNTDN-RRFVSQVTGNLYVAQTVKEDEGAYSCLTTSHISFTTKSVYSSFTQLNVN 221

Query: 212 --VNVLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE 268
             V    +AP I    P + Y + G+ V L C  FG P P + W    +++ G     L 
Sbjct: 222 SEVKPRTYAPSIKVRFPGETYALYGQAVFLECFAFGNPVPHIRW----RKVDGTLPPRLL 277

Query: 269 TGD--LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
             D  L    + F + G Y C A N  G+    G + V+          D E + G    
Sbjct: 278 VIDPVLHFPSITFEEDGTYECEAVNSEGSTTHQGRVIVQAQPEWLHVITDTEAKIGSDLL 337

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
           + C A   P  + +I WLR  +P+  +     ++  +  +  T  S  DSG Y C A+ +
Sbjct: 338 WSCAASGKP--RPTIRWLRDGKPLMTQVN---IEITNGQIKFTSLSLHDSGMYQCVAENK 392

Query: 387 LDFIEAQATLTVQ 399
              I   A LTVQ
Sbjct: 393 HGTIYTTAELTVQ 405



 Score = 47.4 bits (111), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 64/178 (35%), Gaps = 9/178 (5%)

Query: 125 APYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
            P F  +PE   F + + EE VT  C+A   P     W  NG  ++       R VG N 
Sbjct: 27  GPVFEEQPENTLFPDGSIEEQVTLPCRARASPSATYRWQLNGTELNLTADPSYRLVGGNL 86

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTC 240
                 +    G Y C A+N  G V          +  E     +D   V +G  V+L C
Sbjct: 87  AISGPTQSKHAGTYQCIASNPKGTVLSSEASLRFGYLQEFPAEQRDTVKVTEGWGVMLAC 146

Query: 241 R-VFGAPKPEVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKL 293
                 P     W+ N+          R+    TG+L +      D G Y+C   + +
Sbjct: 147 NPPKHYPGLSYRWLLNEFPTFLNTDNRRFVSQVTGNLYVAQTVKEDEGAYSCLTTSHI 204



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 55/132 (41%), Gaps = 11/132 (8%)

Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV------PFKNPDNVEGRGSTPNNLV 619
           SA + GL   T Y   +      GDG  S     +      P   P  V G G  PN L 
Sbjct: 661 SALVVGLNQWTDYLFRIVASNILGDGDPSAPSALIRTREAAPNVAPSEVGGGGGAPNELT 720

Query: 620 ISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQ--PTFQPYEIK 677
           I+WT +     N   F Y I ++R N    W    V   +  + V  N+    + P+++K
Sbjct: 721 INWTPIGRQYQNGDDFGYIIAFKRKNE-NTWLTVRVPGGQSQQYVYRNESIAAYTPFDVK 779

Query: 678 VVQTWTEKDGEG 689
            +Q + +K GEG
Sbjct: 780 -IQGYNKK-GEG 789


>gi|464191|dbj|BAA05886.1| protein tyrosine phosphatase PTPT9 [Mus musculus]
 gi|1093331|prf||2103274A receptor type protein Tyr phosphatase
          Length = 1904

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 174/656 (26%), Positives = 275/656 (41%), Gaps = 55/656 (8%)

Query: 15  ILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI 74
           + L ++A G  A +    P +     K ++ +        C   G P P+  W+K G  +
Sbjct: 18  LFLVLLARGCLAEE----PPRFIREPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKV 73

Query: 75  NPSDRISQGNY----GKSLIIKHVEF-SDQGSYTCEVSNGVGEAKSYSIDLSVL------ 123
           N S R    ++    G  L I+ +    D+  Y C   N VGE   ++  L+VL      
Sbjct: 74  N-SQRFETIDFDESSGAVLRIQPLRTPRDENVYECVAQNSVGEITIHA-KLTVLREDQLP 131

Query: 124 -AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPR-RKVGPNR 181
              P   + P+        T T  C ASG P+PEI W  +  P+  +  N R +++    
Sbjct: 132 PGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGA 191

Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYK---DVYVNVLAHAPEITEAPKDEYTVDGKTVVL 238
           + IE+  ++D G Y C ATNS G  Y    ++YV V   AP  +  P     + G  V +
Sbjct: 192 LQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVRRVAPRFSILPMSHEIMPGGNVNI 251

Query: 239 TCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
           TC   G+P P V W+   ++LT      +    L++TDV   DS  YTC A + LG  + 
Sbjct: 252 TCVAVGSPMPYVKWMQGAEDLTPEDDMPVGRNVLELTDV--KDSANYTCVAMSSLGVIEA 309

Query: 299 SGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE--PIDFESEP 356
              +TVK        P   E  A        +   DP     I +   S+  P   + + 
Sbjct: 310 VAQITVKSLPKAPGTPVVTENTATSITVTWDSGNPDPVSYYVIEYKSKSQDGPYQIKED- 368

Query: 357 RFVQSNDYSL-TVTKSSELDSGQYTCRAQTELDFIEAQATLT-VQVPLEAPSNFTLIQVI 414
             + +  YS+  ++ +SE +       +  +    E+  T T  Q P  AP N    +++
Sbjct: 369 --ITTTRYSIGGLSPNSEYEIWVSAVNSIGQGPPSESVVTRTGEQAPASAPRNVQ-ARML 425

Query: 415 DAKKAVVSW-NPVSPQSLRGHFRGYKVQTWTEKDGE-GSIRELIVNKGESTTTEVDKFVP 472
            A   +V W  PV P  L    RGY+V    E +   G+ ++   N  +S  T V   + 
Sbjct: 426 SATTMIVQWEEPVEPNGL---IRGYRVYYTMEPEHPVGNWQKH--NVDDSLLTTVGSLLE 480

Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
                 RVLAF    +GP S+ I   T +GVPG   +L A     ++  L W  P Q + 
Sbjct: 481 DETYTVRVLAFTSVGDGPLSDPIQVKTQQGVPGQPMNLRAEAKSETSIGLSWSAPRQES- 539

Query: 533 VLMGYKIKY-QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
            ++ Y++ + +  +G +VG          DPTT    +  L+P+T+Y   LA  +  G G
Sbjct: 540 -VIKYELLFREGDRGREVGRTF-------DPTTAFV-VEDLKPNTEYAFRLAARSPQGLG 590

Query: 592 A-----ESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
           A       + L   P   P +V+        +++SW   P   HN     Y + +R
Sbjct: 591 AFTAVVRQRTLQAKPSAPPQDVKCTSLRSTAILVSWRPPPPETHNGALVGYSVRYR 646



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 144/550 (26%), Positives = 230/550 (41%), Gaps = 57/550 (10%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR-------KVG 178
           P F  EP+          +F C+A+G P+P + W   GK +     N +R       +  
Sbjct: 33  PRFIREPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKV-----NSQRFETIDFDESS 87

Query: 179 PNRITIENLRK-SDTGNYGCNATNSLGYVYKDVYVNVLAHA------PEITEAPKDEYTV 231
              + I+ LR   D   Y C A NS+G +     + VL         P I   P+ +   
Sbjct: 88  GAVLRIQPLRTPRDENVYECVAQNSVGEITIHAKLTVLREDQLPPGFPNIDMGPQLKVVE 147

Query: 232 DGKTVVLTCRVFGAPKPEVNWIHN----QKELTGGRYTILETGDLKITDVAFADSGEYTC 287
             +T  + C   G P PE+ W  +        + GR   L +G L+I      D G+Y C
Sbjct: 148 RTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYEC 207

Query: 288 FARNKLGTAQGS-GSLTVKEHT---HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVW 343
            A N  G    S  +L V+        +  P  +E+  G +    C AV  P     + W
Sbjct: 208 VATNSAGVRYSSPANLYVRVRRVAPRFSILPMSHEIMPGGNVNITCVAVGSP--MPYVKW 265

Query: 344 LRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE 403
           ++G+E +  E +   V  N   LT  K    DS  YTC A + L  IEA A +TV+   +
Sbjct: 266 MQGAEDLTPEDD-MPVGRNVLELTDVK----DSANYTCVAMSSLGVIEAVAQITVKSLPK 320

Query: 404 APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGEST 463
           AP    ++    A    V+W+  +P  +  +   YK ++   +DG   I+E I     +T
Sbjct: 321 APGT-PVVTENTATSITVTWDSGNPDPVSYYVIEYKSKS---QDGPYQIKEDIT----TT 372

Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYL 522
              +    P S+    V A N    GPPSE +   T E  P +  ++++A  L ++   +
Sbjct: 373 RYSIGGLSPNSEYEIWVSAVNSIGQGPPSESVVTRTGEQAPASAPRNVQARMLSATTMIV 432

Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
           +W +P +PNG++ GY++ Y       VG   +    + D   T+  +  L     Y + +
Sbjct: 433 QWEEPVEPNGLIRGYRVYYTMEPEHPVGNWQKH--NVDDSLLTT--VGSLLEDETYTVRV 488

Query: 583 AGYTKAGDGAES-----KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKY 637
             +T  GDG  S     K    VP   P N+     +  ++ +SW+A P  E      KY
Sbjct: 489 LAFTSVGDGPLSDPIQVKTQQGVP-GQPMNLRAEAKSETSIGLSWSA-PRQESV---IKY 543

Query: 638 RIFWRRHNTG 647
            + +R  + G
Sbjct: 544 ELLFREGDRG 553



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 178/712 (25%), Positives = 274/712 (38%), Gaps = 102/712 (14%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS---DRISQGNYGKSLIIKHVEFSDQ 99
           +V  R +   + C   G P P+  W KD +P++PS    RI Q   G +L I+  E +DQ
Sbjct: 144 KVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSG-ALQIESSEETDQ 202

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLA---APYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           G Y C  +N  G   S   +L V     AP F++ P          V   C A G P P 
Sbjct: 203 GKYECVATNSAGVRYSSPANLYVRVRRVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPY 262

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV--YKDVYVNV 214
           + W+   + ++   P     VG N + + +++  D+ NY C A +SLG +     + V  
Sbjct: 263 VKWMQGAEDLT---PEDDMPVGRNVLELTDVK--DSANYTCVAMSSLGVIEAVAQITVKS 317

Query: 215 LAHAPE---ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETG 270
           L  AP    +TE      TV   +        G P P   ++   K  +  G Y I E  
Sbjct: 318 LPKAPGTPVVTENTATSITVTWDS--------GNPDPVSYYVIEYKSKSQDGPYQIKE-- 367

Query: 271 DLKITDVA---FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
           D+  T  +    + + EY  +        QG  S +V   T           +A  SA  
Sbjct: 368 DITTTRYSIGGLSPNSEYEIWVSAVNSIGQGPPSESVVTRTG---------EQAPASAPR 418

Query: 328 RCNAVSDPSLKLSIVWLRGSEP--------IDFESEPRFVQSN------DYSLTVTKSSE 373
              A    +  + + W    EP        + +  EP     N      D SL  T  S 
Sbjct: 419 NVQARMLSATTMIVQWEEPVEPNGLIRGYRVYYTMEPEHPVGNWQKHNVDDSLLTTVGSL 478

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRG 433
           L+   YT R    L F     T     PL  P     IQV   ++ V    P  P +LR 
Sbjct: 479 LEDETYTVRV---LAF-----TSVGDGPLSDP-----IQV-KTQQGV----PGQPMNLRA 520

Query: 434 HFRGYKV--QTWTEKDGEGSIR-ELIVNKGE-----------STTTEVDKFVPASKNFAR 479
             +       +W+    E  I+ EL+  +G+           +T   V+   P ++   R
Sbjct: 521 EAKSETSIGLSWSAPRQESVIKYELLFREGDRGREVGRTFDPTTAFVVEDLKPNTEYAFR 580

Query: 480 VLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKWVKP--EQPNGVLMG 536
           + A +    G  + ++   T +  P    Q ++   L S+A  + W  P  E  NG L+G
Sbjct: 581 LAARSPQGLGAFTAVVRQRTLQAKPSAPPQDVKCTSLRSTAILVSWRPPPPETHNGALVG 640

Query: 537 YKIKYQSVKGTKVGPL-LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK 595
           Y ++Y+ +      P  +  +P    PTTT   L  LE  T+YR+    YT+ G G ES 
Sbjct: 641 YSVRYRPLGSEDPDPKEVNNIP----PTTTQILLEALEKWTEYRVTAVAYTEVGPGPESS 696

Query: 596 YLFY-----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
            +       VP   P  VE        + + W +      +     Y++ + R    EA 
Sbjct: 697 PVVVRTDEDVPSAPPRKVEAEALNATAIRVLWRSPTPGRQHGQIRGYQVHYVRMEGAEAR 756

Query: 651 NQ---DDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKG 699
                 D++     E+V+ N      Y I V     + DG  S  +++V KG
Sbjct: 757 GPPRIKDIMLADAQEMVITNLQPETAYSITVAAYTMKGDGARSKPKVVVTKG 808


>gi|402903833|ref|XP_003914760.1| PREDICTED: receptor-type tyrosine-protein phosphatase S isoform 1
           [Papio anubis]
          Length = 1910

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 171/630 (27%), Positives = 265/630 (42%), Gaps = 51/630 (8%)

Query: 41  KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEF 96
           K ++ +        C   G P P+  W+K G  +N S R     +    G  L I+ +  
Sbjct: 40  KDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVN-SQRFETIEFDESAGAVLRIQPLRT 98

Query: 97  -SDQGSYTCEVSNGVGEAKSYSIDLSVL-------AAPYFTVEPEFINAAEEETVTFECK 148
             D+  Y C   N VGE   ++  L+VL         P   + P+        T T  C 
Sbjct: 99  PRDENVYECVAQNSVGEITVHA-KLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCA 157

Query: 149 ASGLPEPEIHWVHNGKPISQAPPNPR-RKVGPNRITIENLRKSDTGNYGCNATNSLGYVY 207
           ASG P+PEI W  +  P+  +  N R +++    + IE+  ++D G Y C ATNS G  Y
Sbjct: 158 ASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRY 217

Query: 208 K---DVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRY 264
               ++YV V   AP  +  P     + G  V +TC   G+P P V W+   ++LT    
Sbjct: 218 SSPANLYVRVRRVAPRFSILPVSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDD 277

Query: 265 TILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
             +    L++TDV   DS  YTC A + LG  +    +TVK        P   E  A   
Sbjct: 278 MPVGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITVKSLPKAPGTPVVTENTATSI 335

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSE--PIDFESEPRFVQSNDYSL-TVTKSSELDSGQYTC 381
                +   DP     I +   S+  P   + +   + +  YS+  ++ +SE +      
Sbjct: 336 TITWDSGNPDPVSYYVIEYKSKSQDGPYQIKED---ITTTRYSIGGLSPNSEYEIWVSAV 392

Query: 382 RAQTELDFIEAQATLT-VQVPLEAPSNFTLIQVIDAKKAVVSW-NPVSPQSLRGHFRGYK 439
            +  +    E+  T T  Q P  AP N    +++ A   +V W  PV P  L    RGY+
Sbjct: 393 NSIGQGPPSESVVTRTGEQAPASAPRNVQ-ARMLSATTMIVQWEEPVEPNGL---IRGYR 448

Query: 440 VQTWTEKDGE-GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
           V    E +   G+ ++   N  +S  T V   +       RVLAF    +GP S+ I   
Sbjct: 449 VYYTMEPEHPVGNWQKH--NVDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLSDPIQVK 506

Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY-QSVKGTKVGPLLERLP 557
           T +GVPG   +L A     ++  L W  P Q +  ++ Y++ + +S  G +VG       
Sbjct: 507 TQQGVPGQPMNLRAEARSETSITLSWSPPRQES--IIKYELLFRESDHGREVGRTF---- 560

Query: 558 YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA-----ESKYLFYVPFKNPDNVEGRG 612
              DP TTS  +  L+P+T+Y   LA  +  G GA       + L   P   P +V+   
Sbjct: 561 ---DP-TTSYVVEDLKPNTEYAFRLAARSPQGLGAFTPVVRQRTLQSKPSAPPQDVKCVS 616

Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
                +++SW   P   HN     Y + +R
Sbjct: 617 VRSTAILVSWRPPPPETHNGALVGYSVRYR 646



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 142/550 (25%), Positives = 229/550 (41%), Gaps = 57/550 (10%)

Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR-------KVG 178
           P F  EP+          +F C+A+G P+P + W   GK +     N +R       +  
Sbjct: 33  PRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKV-----NSQRFETIEFDESA 87

Query: 179 PNRITIENLRK-SDTGNYGCNATNSLGYVYKDVYVNVLAHA------PEITEAPKDEYTV 231
              + I+ LR   D   Y C A NS+G +     + VL         P I   P+ +   
Sbjct: 88  GAVLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVE 147

Query: 232 DGKTVVLTCRVFGAPKPEVNWIHN----QKELTGGRYTILETGDLKITDVAFADSGEYTC 287
             +T  + C   G P PE+ W  +        + GR   L +G L+I      D G+Y C
Sbjct: 148 RTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYEC 207

Query: 288 FARNKLGTAQGS-GSLTVKEHT---HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVW 343
            A N  G    S  +L V+        +  P  +E+  G +    C AV  P   +   W
Sbjct: 208 VATNSAGVRYSSPANLYVRVRRVAPRFSILPVSHEIMPGGNVNITCVAVGSPMPYVK--W 265

Query: 344 LRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE 403
           ++G+E +  E +   V  N   LT  K    DS  YTC A + L  IEA A +TV+   +
Sbjct: 266 MQGAEDLTPEDD-MPVGRNVLELTDVK----DSANYTCVAMSSLGVIEAVAQITVKSLPK 320

Query: 404 APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGEST 463
           AP    + +   A    ++W+  +P  +  +   YK ++   +DG   I+E I     +T
Sbjct: 321 APGTPVVTENT-ATSITITWDSGNPDPVSYYVIEYKSKS---QDGPYQIKEDIT----TT 372

Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYL 522
              +    P S+    V A N    GPPSE +   T E  P +  ++++A  L ++   +
Sbjct: 373 RYSIGGLSPNSEYEIWVSAVNSIGQGPPSESVVTRTGEQAPASAPRNVQARMLSATTMIV 432

Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
           +W +P +PNG++ GY++ Y       VG   +    + D   T+  +  L     Y + +
Sbjct: 433 QWEEPVEPNGLIRGYRVYYTMEPEHPVGNWQKH--NVDDSLLTT--VGSLLEDETYTVRV 488

Query: 583 AGYTKAGDGAES-----KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKY 637
             +T  GDG  S     K    VP   P N+     +  ++ +SW+  P  E      KY
Sbjct: 489 LAFTSVGDGPLSDPIQVKTQQGVP-GQPMNLRAEARSETSITLSWSP-PRQES---IIKY 543

Query: 638 RIFWRRHNTG 647
            + +R  + G
Sbjct: 544 ELLFRESDHG 553



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 169/703 (24%), Positives = 270/703 (38%), Gaps = 84/703 (11%)

Query: 43  EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS---DRISQGNYGKSLIIKHVEFSDQ 99
           +V  R +   + C   G P P+  W KD +P++PS    RI Q   G +L I+  E +DQ
Sbjct: 144 KVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSG-ALQIESSEETDQ 202

Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLA---APYFTVEPEFINAAEEETVTFECKASGLPEPE 156
           G Y C  +N  G   S   +L V     AP F++ P          V   C A G P P 
Sbjct: 203 GKYECVATNSAGVRYSSPANLYVRVRRVAPRFSILPVSHEIMPGGNVNITCVAVGSPMPY 262

Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV--YKDVYVNV 214
           + W+   + ++   P     VG N + + +++  D+ NY C A +SLG +     + V  
Sbjct: 263 VKWMQGAEDLT---PEDDMPVGRNVLELTDVK--DSANYTCVAMSSLGVIEAVAQITVKS 317

Query: 215 LAHAPE---ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETG 270
           L  AP    +TE      T+   +        G P P   ++   K  +  G Y I E  
Sbjct: 318 LPKAPGTPVVTENTATSITITWDS--------GNPDPVSYYVIEYKSKSQDGPYQIKE-- 367

Query: 271 DLKITDVA---FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
           D+  T  +    + + EY  +        QG  S +V   T           +A  SA  
Sbjct: 368 DITTTRYSIGGLSPNSEYEIWVSAVNSIGQGPPSESVVTRTG---------EQAPASAPR 418

Query: 328 RCNAVSDPSLKLSIVWLRGSEP--------IDFESEPRFVQSN------DYSLTVTKSSE 373
              A    +  + + W    EP        + +  EP     N      D SL  T  S 
Sbjct: 419 NVQARMLSATTMIVQWEEPVEPNGLIRGYRVYYTMEPEHPVGNWQKHNVDDSLLTTVGSL 478

Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEA-----PSNFTLIQVIDAKKAVVSWNPVSP 428
           L+   YT R        +   +  +QV  +      P N    +        +SW+P   
Sbjct: 479 LEDETYTVRVLAFTSVGDGPLSDPIQVKTQQGVPGQPMNLR-AEARSETSITLSWSPPRQ 537

Query: 429 QSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
           +S+       K +    +   G  RE+      +T+  V+   P ++   R+ A +    
Sbjct: 538 ESI------IKYELLFRESDHG--REVGRTFDPTTSYVVEDLKPNTEYAFRLAARSPQGL 589

Query: 489 GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVK 545
           G  + ++   T +  P    Q ++ + + S+A  + W  P  E  NG L+GY ++Y+ + 
Sbjct: 590 GAFTPVVRQRTLQSKPSAPPQDVKCVSVRSTAILVSWRPPPPETHNGALVGYSVRYRPLG 649

Query: 546 GTKVGPL-LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY----- 599
                P  +  +P    PTTT   L  LE  T+YRI    +T+ G G ES  +       
Sbjct: 650 SEDPEPKEVNGIP----PTTTQILLEALEKWTQYRITTVAHTEVGPGPESSPVVVRTDED 705

Query: 600 VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ---DDVL 656
           VP   P  VE        + + W +      +     Y++ + R    EA       DV+
Sbjct: 706 VPSAPPRKVEAEALNATAIRVLWRSPAPGRQHGQIRGYQVHYVRMEGAEARGPPRIKDVM 765

Query: 657 DWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKG 699
                E+V+ N      Y I V     + DG  S  +++V KG
Sbjct: 766 LADAQEMVITNLQPETAYSITVAAYTMKGDGARSKPKVVVTKG 808



 Score = 42.4 bits (98), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 16/196 (8%)

Query: 437  GYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS 496
            GY++Q   E     +  E   ++   T + V K   A+  F       G      +E++S
Sbjct: 843  GYRLQFGREDSTPLATLEFPPSEDRYTASGVHKG--ATYVFRLAARSRGGLGEEAAEVLS 900

Query: 497  FVTPEGVP-GTVQSLEAIPLGSSA-FYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPL 552
               PE  P G  Q LEA    S+    L+W+ P   + NG ++ Y +  +  +   +GP 
Sbjct: 901  I--PEDTPRGHPQILEAAGNASAGTVLLRWLPPVPAERNGAIVKYTVAVR--EAGALGPA 956

Query: 553  LE-RLPYISDPTTTSA-KLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFK----NPD 606
             E  LP  ++P   +A  L GL+P T Y + +  +T+ G G  S  + Y  F     +P 
Sbjct: 957  RETELPAAAEPGAENALTLQGLKPDTAYDLQVRAHTRRGPGPFSPPVRYRTFLRDQVSPK 1016

Query: 607  NVEGRGSTPNNLVISW 622
            N + +     ++++SW
Sbjct: 1017 NFKVKMIMKTSVLLSW 1032


>gi|270013708|gb|EFA10156.1| hypothetical protein TcasGA2_TC012344 [Tribolium castaneum]
          Length = 2123

 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 160/593 (26%), Positives = 243/593 (40%), Gaps = 94/593 (15%)

Query: 53  LFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGN-YGKSLIIKHVEFSDQGSYTCEVSNG 109
           L CI    PL +  T+W KD + I      S  + + +SL +  V  +  G Y C V   
Sbjct: 211 LDCIANARPLHELETLWFKDDILIENGGMYSLNDIWNRSLTLISVNTTQSGQYECRV--- 267

Query: 110 VGEAKSYSIDLSVLAAPYFTV--EPEFINAAEEET-------VTFECKASGLPEPEIHWV 160
               +S   D +V A    TV  +P F++A   ET       ++  C   G+P+P + W 
Sbjct: 268 --RLRSERFD-TVTAKAIVTVLEKPRFVSATRAETLGEYGTPISLPCDVVGIPKPNVTWY 324

Query: 161 HNGKPISQAPPNPRRKV--GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
            N + +       +R V    N + I+ L  +D+G + C A +  G      ++ V    
Sbjct: 325 KNSQEVDLTD---KRYVLEEDNSLRIKKLLINDSGMFQCFAKSEAGESSISTWLKVKTAG 381

Query: 219 PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDV 277
           P +   P++   +DGK   L CR  GAP P + W +    + T  R  IL+TGDL I  V
Sbjct: 382 PVMELGPQNATVLDGKDATLACRAVGAPTPNITWFYKGDLIETSSRVQILDTGDLLIAAV 441

Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
             +D G YTC   N+ G  +GS  L V   T I   P D  V  G +AT +C   SDP++
Sbjct: 442 KESDVGMYTCLRANEAGEVRGSAHLGVLVRTQIIQPPVDTRVLLGHTATLQCKISSDPAV 501

Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
              + W +  + ++ ++  R     D +L +      D G YTC  ++        A L+
Sbjct: 502 PFDLRWYKNKQALNPKASSRISILKDGTLEIQAVRAADVGLYTCSIKSPGGNETRSAKLS 561

Query: 398 VQVPLEAPSNFTLIQVIDA-KKAV-VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIREL 455
           V     AP+N    ++  A ++AV VSW P           G+        DG   I++ 
Sbjct: 562 VIELPYAPTNVKAERLDTASQRAVNVSWIP-----------GF--------DGNSPIKQF 602

Query: 456 IVNKGE------------------STTTEVDKFV-------PASKNFARVLAFNGAYNGP 490
           I+ K E                  S  +   +++        A+  F RV A N    G 
Sbjct: 603 IIQKRELPELGPIPDPLLNWVTELSNVSAEQRWILLTNLKAAAAYQF-RVSAVNSVGEGS 661

Query: 491 PSE-----IISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQ 542
           PSE     ++    P G P G V S  +    SS    +W  P  E  NG ++GY I+Y+
Sbjct: 662 PSEPSNQVMLPQEAPSGPPVGFVGSARS----SSEIITQWQPPLEEHRNGQILGYIIRYK 717

Query: 543 SVKGTKVGPLLERLPYISDPTTTSAK----LAGLEPSTKYRIHLAGYTKAGDG 591
               T         P+I    T  A+    +  L     Y + +A Y   G G
Sbjct: 718 LFGYTNS-------PWIVQNITNEAQRNYLIQDLITWKDYIVQIAAYNNKGVG 763



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 152/611 (24%), Positives = 256/611 (41%), Gaps = 48/611 (7%)

Query: 33  PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
           P+    TR + +      + L C   G P P   W K+   ++ +D+        SL IK
Sbjct: 289 PRFVSATRAETLGEYGTPISLPCDVVGIPKPNVTWYKNSQEVDLTDKRYVLEEDNSLRIK 348

Query: 93  HVEFSDQGSYTCEVSNGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASG 151
            +  +D G + C   +  GE+ S S  L V  A P   + P+     + +  T  C+A G
Sbjct: 349 KLLINDSGMFQCFAKSEAGES-SISTWLKVKTAGPVMELGPQNATVLDGKDATLACRAVG 407

Query: 152 LPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVY 211
            P P I W + G  I  +  +  + +    + I  +++SD G Y C   N  G V    +
Sbjct: 408 APTPNITWFYKGDLIETS--SRVQILDTGDLLIAAVKESDVGMYTCLRANEAGEVRGSAH 465

Query: 212 VNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKP--EVNWIHNQKEL---TGGRYTI 266
           + VL    +I + P D   + G T  L C++   P    ++ W  N++ L      R +I
Sbjct: 466 LGVLVRT-QIIQPPVDTRVLLGHTATLQCKISSDPAVPFDLRWYKNKQALNPKASSRISI 524

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
           L+ G L+I  V  AD G YTC  ++  G    S  L+V E  +    P + + E   +A+
Sbjct: 525 LKDGTLEIQAVRAADVGLYTCSIKSPGGNETRSAKLSVIELPY---APTNVKAERLDTAS 581

Query: 327 FRCNAVS-------DPSLKLSIVWLR-----GSEP---IDFESEPRFVQSNDYSLTVTKS 371
            R   VS       +  +K  I+  R     G  P   +++ +E   V +    + +T  
Sbjct: 582 QRAVNVSWIPGFDGNSPIKQFIIQKRELPELGPIPDPLLNWVTELSNVSAEQRWILLTNL 641

Query: 372 SELDSGQYTCRAQTEL-DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKA---VVSWNPVS 427
               + Q+   A   + +   ++ +  V +P EAPS   +  V  A+ +   +  W P  
Sbjct: 642 KAAAAYQFRVSAVNSVGEGSPSEPSNQVMLPQEAPSGPPVGFVGSARSSSEIITQWQPPL 701

Query: 428 PQSLRGHFRGYKVQ-TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
            +   G   GY ++           I + I N+ +     +   +       ++ A+N  
Sbjct: 702 EEHRNGQILGYIIRYKLFGYTNSPWIVQNITNEAQRNYL-IQDLITWKDYIVQIAAYNNK 760

Query: 487 YNGPPSEIISFVTPEGVPGTVQSLE-AIPLGSSAFYLKWV--KPEQPNGVLMGYKIKYQS 543
             G  +E     T EGVP     ++  +PL S+   + W    P++ NG+  GYKI  Q+
Sbjct: 761 GVGVFTEGARIKTKEGVPEAPPIIQTVVPLNSTTIQITWKPPDPQKINGINQGYKI--QA 818

Query: 544 VKGTKVGPLLERL-----PYISDPTT-TSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL 597
            +  K G L E       P + DP    +A + GLE  T Y + +  +T  GDG  S+  
Sbjct: 819 WQTDKNGDLFEAKMITVHPNLLDPNQEQTALMTGLEKFTDYNVTVLCFTDPGDGEISE-- 876

Query: 598 FYVPFKNPDNV 608
            +VP K  ++V
Sbjct: 877 -FVPVKTKEDV 886



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 142/606 (23%), Positives = 239/606 (39%), Gaps = 90/606 (14%)

Query: 46  LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
           L  K   L C   G P P   W   G  I  S R+   + G  L+I  V+ SD G YTC 
Sbjct: 394 LDGKDATLACRAVGAPTPNITWFYKGDLIETSSRVQILDTG-DLLIAAVKESDVGMYTCL 452

Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEP--EIHWVHNG 163
            +N  GE +  S  L VL        P         T T +CK S  P    ++ W  N 
Sbjct: 453 RANEAGEVRG-SAHLGVLVRTQIIQPPVDTRVLLGHTATLQCKISSDPAVPFDLRWYKNK 511

Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAPEI 221
           + ++    +    +    + I+ +R +D G Y C+  +  G   +   ++V  L +AP  
Sbjct: 512 QALNPKASSRISILKDGTLEIQAVRAADVGLYTCSIKSPGGNETRSAKLSVIELPYAPTN 571

Query: 222 TEAPKDEYT------------VDG----KTVVLTCRVFG----APKPEVNWIHNQKELTG 261
            +A + +               DG    K  ++  R        P P +NW+     ++ 
Sbjct: 572 VKAERLDTASQRAVNVSWIPGFDGNSPIKQFIIQKRELPELGPIPDPLLNWVTELSNVSA 631

Query: 262 GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA 321
            +  IL      +T++  A + ++   A N +G  +GS S    +     + P    V  
Sbjct: 632 EQRWIL------LTNLKAAAAYQFRVSAVNSVG--EGSPSEPSNQVMLPQEAPSGPPVGF 683

Query: 322 GQSATFRCNAVSD--PSLKLS-----IVWLRGSEPIDFESEPRFVQS------------- 361
             SA      ++   P L+       + ++   +   + + P  VQ+             
Sbjct: 684 VGSARSSSEIITQWQPPLEEHRNGQILGYIIRYKLFGYTNSPWIVQNITNEAQRNYLIQD 743

Query: 362 ----NDYSLTVTKSSELDSGQYT--CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVID 415
                DY + +   +    G +T   R +T+    EA   +   VPL    N T IQ+  
Sbjct: 744 LITWKDYIVQIAAYNNKGVGVFTEGARIKTKEGVPEAPPIIQTVVPL----NSTTIQI-- 797

Query: 416 AKKAVVSWNPVSPQSLRGHFRGYKVQTW-TEKDGEGSIRELIV---------NKGESTTT 465
                 +W P  PQ + G  +GYK+Q W T+K+G+    ++I           +  +  T
Sbjct: 798 ------TWKPPDPQKINGINQGYKIQAWQTDKNGDLFEAKMITVHPNLLDPNQEQTALMT 851

Query: 466 EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWV 525
            ++KF   +     VL F    +G  SE +   T E VP  V +L+   +   A  + W 
Sbjct: 852 GLEKFTDYN---VTVLCFTDPGDGEISEFVPVKTKEDVPDEVSNLQFDDISDRAVKVIWQ 908

Query: 526 KPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
            P+  NG+L GY+I+YQ     +  P   ++  ++   T S K+  L+ +T Y+  +  +
Sbjct: 909 PPKHINGILTGYQIRYQ----IRDKPDTVKIKNLT-ADTLSLKVTDLQATTHYKFEVTAW 963

Query: 586 TKAGDG 591
           T  G G
Sbjct: 964 TAMGAG 969



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 93/372 (25%), Positives = 148/372 (39%), Gaps = 44/372 (11%)

Query: 42  KEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGS 101
           K +A+     +        P PQ  W KD VPI      S   Y K +   H    D+GS
Sbjct: 11  KVIAMIGSLFDFLFGLRSNPSPQFRWLKDWVPIT---EFSTDAYYKIISASH---KDEGS 64

Query: 102 YTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGL--------P 153
           Y C  +N +G     S ++ +L A Y  V   F +  E+     E +A+ L        P
Sbjct: 65  YRCIAANKIGSI--LSEEMKILVA-YMKV---FEDQTEKSESVVEGQAAILNLPEIESKP 118

Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSL-GYVYKDVYV 212
           +PE+ W      +  A    + K   N++ I +  KSD   Y   A N+  G      ++
Sbjct: 119 KPEVTWHTESGQLPYAQKYAKSK--SNQLIILSTDKSDQKAYRARAINTQEGKEENSAFI 176

Query: 213 NVLAH--------APEITEAPKDEYTVDGKT-VVLTCRVFGAPKPEVNWIHNQKEL---T 260
            +           AP+I   P+D   V G     L C     P  E+  +  + ++    
Sbjct: 177 RLTVQESSDHKEIAPQIIVPPEDVKIVRGTAQTTLDCIANARPLHELETLWFKDDILIEN 236

Query: 261 GGRYTILETGD--LKITDVAFADSGEYTCFAR---NKLGTAQGSGSLTVKEHTHITDQPE 315
           GG Y++ +  +  L +  V    SG+Y C  R    +  T      +TV E         
Sbjct: 237 GGMYSLNDIWNRSLTLISVNTTQSGQYECRVRLRSERFDTVTAKAIVTVLEKPRFVSATR 296

Query: 316 DYEV-EAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
              + E G   +  C+ V  P  K ++ W + S+ +D  ++ R+V   D SL + K    
Sbjct: 297 AETLGEYGTPISLPCDVVGIP--KPNVTWYKNSQEVDL-TDKRYVLEEDNSLRIKKLLIN 353

Query: 375 DSGQYTCRAQTE 386
           DSG + C A++E
Sbjct: 354 DSGMFQCFAKSE 365



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 10/153 (6%)

Query: 480  VLAFNGAYNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMG 536
            V+ FN    GP +  ++    E VP G  + LE   + S+   LKW   + +Q NG L+G
Sbjct: 1567 VVPFNSQGEGPATPPVTVYVGEAVPTGEPRDLEGEAVSSTEVRLKWKPPQQQQQNGELLG 1626

Query: 537  YKIKY---QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
            YKI Y    S +    G   E    +   T TS  L  L+  T+YRI +  +  AGDG  
Sbjct: 1627 YKIFYLVTNSPQDFDEGHKFEEEIEVIAATMTSHSLVFLDKYTEYRIQILAFNPAGDGPR 1686

Query: 594  SKYLFYVPFKN----PDNVEGRGSTPNNLVISW 622
            S+ +     +     P N+     T N+L++SW
Sbjct: 1687 SRPITVKTLQGLPGPPANLRFSDITMNSLLVSW 1719



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 9/182 (4%)

Query: 420  VVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTT-TEVDKFVPASKNFA 478
            VV W  V  +   G   GYKV    E       + +  N   +TT TE+ KFV       
Sbjct: 1202 VVKWGDVPKEHQNGLIEGYKVYYAAESKSPVQYKLIASNSTFTTTLTELRKFVVYR---I 1258

Query: 479  RVLAFNGAYNGPPSE-IISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
            +VLA+    +G PS+  +S  T E VPG   ++    +  ++  + W  PE+PNG ++ Y
Sbjct: 1259 QVLAYTRLGDGEPSKPAVSVRTFEDVPGPPSNVSFPDVSVTSARIIWDVPEEPNGEILAY 1318

Query: 538  KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL 597
            K+ Y            +  P    P+  + +   LEP   Y   +   T+ G G  +  L
Sbjct: 1319 KVTYHIDNVNVNNKYSKEFP----PSDRTFRFTQLEPEKYYMFSVTAQTRLGWGKTAHAL 1374

Query: 598  FY 599
             +
Sbjct: 1375 VF 1376



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 12/203 (5%)

Query: 397  TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
            T+Q P   P     ++ + A +  V W P+      G+ RGY +     + GE     + 
Sbjct: 1079 TIQAPPAHPPKNVTVRAMSATEVRVRWIPLQQIEWFGNPRGYSISYVEVRTGEKQTATID 1138

Query: 457  VNKGES-TTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPG-TVQSLEAIP 514
             +   S   T +++F     +         + +GP   +    T E VP     ++EA  
Sbjct: 1139 DHTANSHVITGLEEFALYEVSMQACNDVGCSMDGP---VALERTRESVPSFGPLNIEANA 1195

Query: 515  LGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGL 572
              S+   +KW  V  E  NG++ GYK+ Y +   + V     +   I+  +T +  L  L
Sbjct: 1196 TSSTTIVVKWGDVPKEHQNGLIEGYKVYYAAESKSPV-----QYKLIASNSTFTTTLTEL 1250

Query: 573  EPSTKYRIHLAGYTKAGDGAESK 595
                 YRI +  YT+ GDG  SK
Sbjct: 1251 RKFVVYRIQVLAYTRLGDGEPSK 1273



 Score = 44.3 bits (103), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 40/67 (59%)

Query: 479  RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
            ++LAFN A +GP S  I+  T +G+PG   +L    +  ++  + W  P++ NG ++GY 
Sbjct: 1674 QILAFNPAGDGPRSRPITVKTLQGLPGPPANLRFSDITMNSLLVSWDPPKKRNGDIIGYL 1733

Query: 539  IKYQSVK 545
            + Y++ +
Sbjct: 1734 VTYETTE 1740


>gi|51476685|emb|CAH18318.1| hypothetical protein [Homo sapiens]
          Length = 865

 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 163/629 (25%), Positives = 265/629 (42%), Gaps = 57/629 (9%)

Query: 45  ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
           AL  ++V L C   G P+P+  W K    ++P    ++     +L I  V F D+G+Y C
Sbjct: 142 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWTTAE----PTLQIPSVSFEDEGTYEC 197

Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEE------ETVTFECKASGLPEPEIH 158
           E  N  G         +V        +PE++    +        + + C A+G P P + 
Sbjct: 198 EAENPKGRD-------TVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVR 250

Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
           W+ NG+ ++      R +V    +    L   D+G Y C A N  G +Y    + V A A
Sbjct: 251 WLRNGELLAS---QNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALA 307

Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKIT 275
           P+    P         G  +++ C+   APK  V W    + L    R T+   G L I 
Sbjct: 308 PDFRLNPVRRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIR 367

Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
           +++ +D G+YTCFA N +G A  +G L+V++ T IT  P   ++  G + T +C A  DP
Sbjct: 368 NISRSDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTLQCRASHDP 427

Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDY-----SLTVTKSSELDSGQYTCRAQTELDFI 390
           ++ L+  W     PIDF+      +  +       LT+  +     G+YTC AQT +D  
Sbjct: 428 TMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSA 487

Query: 391 EAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDG 448
             +AT+ V+ P   P    +  + D     +SW+    +    H     Y +Q  T   G
Sbjct: 488 SKEATVLVRGPPGPPGGVVVRDIGDT-TIQLSWS----RGFDNHSPIAKYTLQARTPPAG 542

Query: 449 E-GSIRELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEG 502
           +   +R    N +G + T +V    P      RV+A N    G  +GP S+I    T E 
Sbjct: 543 KWKQVRTNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKI---RTREA 599

Query: 503 VPGTVQSLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
            P    S  +   G+     + W  +  E  NG   GY + ++    T       R+P  
Sbjct: 600 APSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQ--TARVPG- 656

Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGST 614
           +D          + P T + + +  Y + GDG ES   L Y     P   P  V  +G +
Sbjct: 657 ADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVS 716

Query: 615 PNNLVISWTAMPEIEHNAPHFKYRI-FWR 642
            + + ++W  + + + N     Y I +W+
Sbjct: 717 SSEMNVTWEPVQQ-DMNGILLGYEIRYWK 744



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 142/651 (21%), Positives = 230/651 (35%), Gaps = 69/651 (10%)

Query: 88  SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
           +L I     SD G+Y+C      + S     +K   ++L+     L AP      P    
Sbjct: 82  NLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDTRLFAPSIKARFPAETY 141

Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
           A   + VT EC A G P P I W      +S     P+       + I ++   D G Y 
Sbjct: 142 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-----PQWTTAEPTLQIPSVSFEDEGTYE 196

Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
           C A N  G       + V A  PE  +   D     G  +   C   G P+P V W+ N 
Sbjct: 197 CEAENPKGRDTVQGRIIVQAQ-PEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNG 255

Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
           + L       +  GDL+ + ++  DSG Y C A NK GT   S  L V+         P 
Sbjct: 256 ELLASQNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPV 315

Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
              + A +            + K  ++W +G+E +   S  R   + D +L +   S  D
Sbjct: 316 RRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSS--RVTVTPDGTLIIRNISRSD 373

Query: 376 SGQYTCRAQTELDFIEAQATLTVQ-------VPLEAPSNFTLIQVIDAKKA-------VV 421
            G+YTC A+  +    +   L+V+        P  A  N      +  + +         
Sbjct: 374 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTLQCRASHDPTMDLTF 433

Query: 422 SWN----PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 477
           +W     P+      GH+R   V+   E  G+ +I    +  G   T      V ++   
Sbjct: 434 TWTLDDFPIDFDKPGGHYRRTNVK---ETIGDLTILNAQLRHGGKYTCMAQTVVDSASKE 490

Query: 478 ARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
           A VL                            +    +G +   L W +    +  +  Y
Sbjct: 491 ATVLVRGPPG------------------PPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKY 532

Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES--- 594
            ++ ++    K   +    P   +    +A++ GL P   Y   +      G G  S   
Sbjct: 533 TLQARTPPAGKWKQVRTN-PANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPS 591

Query: 595 ---KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWN 651
              +     P   P  + G G  P  L+++WT M     N   F Y + +RR  +   W 
Sbjct: 592 SKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTH-WQ 650

Query: 652 QDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
              V        V +N+    + P+E+K+       DG  S+  L+ +  E
Sbjct: 651 TARVPGADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTALVYSAEE 701



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 142/614 (23%), Positives = 227/614 (36%), Gaps = 84/614 (13%)

Query: 55  CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
           C   G P P   W ++G  +   +R+        L    +   D G Y C   N  G   
Sbjct: 239 CAAAGKPRPTVRWLRNGELLASQNRVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTIY 296

Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
           + S +L+V A AP F + P    I AA    +   C+    P+  + W    + +  +  
Sbjct: 297 A-SAELAVQALAPDFRLNPVRRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSS- 354

Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
             R  V P+  + I N+ +SD G Y C A N +G       ++V   A +IT AP     
Sbjct: 355 --RVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 411

Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
             G  + L CR    P  ++ +     +        GG Y    + ET GDL I +    
Sbjct: 412 NLGDNLTLQCRASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLR 471

Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS---------------- 324
             G+YTC A+  + +A  S   TV               + G +                
Sbjct: 472 HGGKYTCMAQTVVDSA--SKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPI 529

Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQ 378
           A +   A + P+ K   V    + P + E      Q        DY   V  S+ L +G+
Sbjct: 530 AKYTLQARTPPAGKWKQV---RTNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGE 586

Query: 379 YTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGY 438
            +    +++   EA  ++                     + +V+W P+S +   G   GY
Sbjct: 587 PSG-PSSKIRTREAAPSVAPSG--------LSGGGGAPGELIVNWTPMSREYQNGDGFGY 637

Query: 439 KVQ-------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
            +         W      G+  +  V   ES    V  + P      ++ ++N   +GP 
Sbjct: 638 LLSFRRQGSTHWQTARVPGADAQYFVYSNES----VRPYTPFE---VKIRSYNRRGDGPE 690

Query: 492 SEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKGTKV 549
           S      + E  P    + + A  + SS   + W   +Q  NG+L+GY+I+Y      + 
Sbjct: 691 SLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGILLGYEIRYWKAGDKEA 750

Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVE 609
                R   +     TSA+++GL P+TKY + +  Y +AG G  S        K P    
Sbjct: 751 AADRVRTAGLD----TSARVSGLHPNTKYHVTVRAYNRAGTGPASPSANATTMKPPPR-- 804

Query: 610 GRGSTPNNLVISWT 623
                P N  ISWT
Sbjct: 805 ---RPPGN--ISWT 813


>gi|410977758|ref|XP_003995268.1| PREDICTED: netrin receptor DCC [Felis catus]
          Length = 1439

 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 167/634 (26%), Positives = 264/634 (41%), Gaps = 53/634 (8%)

Query: 44  VALRNKKVELFCIF-GGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFS---- 97
           V +R   V L C       +P   W KDGV +    D   Q     SL+I+++  S    
Sbjct: 42  VTMRGGNVLLNCSAESDRGVPVIKWKKDGVHLALGMDERKQQLPNGSLLIQNILHSRHHK 101

Query: 98  -DQGSYTCEVSNG-VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEP 155
            D+G Y CE S G  G   S +  ++V     F  + E + A   +TV  +C+  G P P
Sbjct: 102 PDEGLYQCEASLGDSGSIISRTAKVAVAGPLRFLSQTESVTAFMGDTVLLKCEVIGEPMP 161

Query: 156 EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
            IHW  N + +   P + R  V P+  + I  L+  DTG Y C A N       +V +  
Sbjct: 162 TIHWQKNQQDLIPIPGDSRVVVLPSGALQISRLQPGDTGIYRCLARNPASSRTGNVILCF 221

Query: 215 LAHAPEI------TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTI 266
           L+  P +       + P +   ++GK  +L C V G P P   W+  ++  +L   +Y++
Sbjct: 222 LSTDPGLHRQLYFLQRPSNVVAIEGKDAILECCVSGYPPPSFTWLRGEEVVQLRSKKYSL 281

Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
           L   +L I++V   DSG YTC    K      S  LTV       + P +          
Sbjct: 282 LGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIE 341

Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFV-QSNDYSLTVTKSSELDSGQYTCRAQT 385
           F C+    P    ++ W++  + +      + V  SN   L V KS   D G Y C A+ 
Sbjct: 342 FECSVSGKPV--PTVNWMKNGDVVIPSDYFQIVGGSNLRILGVVKS---DEGFYQCVAEN 396

Query: 386 ELDFIEAQATLTVQVPL--------EAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRG 437
           E    +  A L V  P          AP +   + ++ ++   +SW P  P   +G+ + 
Sbjct: 397 EAGNAQTSAQLIVPKPAIPSSSVLPSAPRDVVPV-LVSSRFVRLSWRP--PAEAKGNIQT 453

Query: 438 YKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
           + V  +  ++G+   R L  ++  S    V    P +    RV+A+N    G  S+ I  
Sbjct: 454 FTV--FFSREGDNRERALNTSQPGSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKV 511

Query: 498 VT-PE-GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVK-GTKVGPLLE 554
            T PE  VPG V++L+A+    ++  + W  P   NG + GY++    V  G +    ++
Sbjct: 512 ATQPELQVPGPVENLQAVSTSPTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIEVD 571

Query: 555 RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVE 609
            L Y         KL GL+  T+Y +    Y + G G  +       L  VP   P NV 
Sbjct: 572 GLSY---------KLEGLKKFTEYTLRFLAYNRYGPGVSTDDITVVTLSDVPSAPPQNVS 622

Query: 610 GRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
                  ++ +SW   P    N     Y+I  R+
Sbjct: 623 LEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRK 656



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 161/619 (26%), Positives = 240/619 (38%), Gaps = 82/619 (13%)

Query: 18  NVIATGISASQNRHAPKQQYVTRKKE--VALRNKKVELFCIFGGTPLPQTIWSKDGVPIN 75
           NVI   +S     H  +Q Y  ++    VA+  K   L C   G P P   W +    + 
Sbjct: 216 NVILCFLSTDPGLH--RQLYFLQRPSNVVAIEGKDAILECCVSGYPPPSFTWLRGEEVVQ 273

Query: 76  PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFI 135
              +      G +L+I +V   D G+YTC V+    E  S S +L+VL  P+F   P  +
Sbjct: 274 LRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYK-NENISASAELTVLVPPWFLNHPSNL 332

Query: 136 NAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNY 195
            A E   + FEC  SG P P ++W+ NG  +   P +  + VG + + I  + KSD G Y
Sbjct: 333 YAYESMDIEFECSVSGKPVPTVNWMKNGDVV--IPSDYFQIVGGSNLRILGVVKSDEGFY 390

Query: 196 GCNATNSLGYVYKDVYVNV----LAHAPEITEAPKD--EYTVDGKTVVLTCRVFGAPKPE 249
            C A N  G       + V    +  +  +  AP+D     V  + V L+ R     K  
Sbjct: 391 QCVAENEAGNAQTSAQLIVPKPAIPSSSVLPSAPRDVVPVLVSSRFVRLSWRPPAEAKGN 450

Query: 250 VN----WIHNQKELTGGRYTILETGDLKITDVAFADSGEYT--CFARNKLGTAQGSGSLT 303
           +     +   + +         + G L++T         YT    A N+ G  + S  + 
Sbjct: 451 IQTFTVFFSREGDNRERALNTSQPGSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIK 510

Query: 304 VKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSND 363
           V        QPE  +V           AVS     + I W    EP  + + P  VQ   
Sbjct: 511 V------ATQPE-LQVPG---PVENLQAVSTSPTSILITW----EPPAYANGP--VQG-- 552

Query: 364 YSLTVTKSS-------ELDSGQYTCRA-----QTELDFIE--------AQATLTV----Q 399
           Y L  T+ S       E+D   Y         +  L F+         +   +TV     
Sbjct: 553 YRLFCTEVSTGKEQNIEVDGLSYKLEGLKKFTEYTLRFLAYNRYGPGVSTDDITVVTLSD 612

Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
           VP   P N +L +V++++   VSW P    +  G   GYK++   +    G +  L  N 
Sbjct: 613 VPSAPPQNVSL-EVVNSRSIKVSWLPPPSGTQNGFITGYKIR-HRKMTRRGEMETLEPNN 670

Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG------VPGTVQSLEAI 513
                T ++K    S+   +V A      GPPS   +  TPE       VP    SL   
Sbjct: 671 LWYLFTGLEK---GSQYSFQVSAMTVNGTGPPSNWYTAETPENDLDESQVPDQPSSLHVR 727

Query: 514 PLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGL 572
           P  ++   + W  P  PN V+ GY I Y       VG P  E +    D       +  L
Sbjct: 728 P-QTNCIIMSWTPPLNPNIVVRGYIIGY------GVGSPYAETVRV--DSKQRYYSIERL 778

Query: 573 EPSTKYRIHLAGYTKAGDG 591
           E S+ Y I L  +  AG+G
Sbjct: 779 ESSSHYVISLKAFNNAGEG 797


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.314    0.132    0.394 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,993,461,759
Number of Sequences: 23463169
Number of extensions: 596400878
Number of successful extensions: 1321942
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6545
Number of HSP's successfully gapped in prelim test: 15841
Number of HSP's that attempted gapping in prelim test: 985686
Number of HSP's gapped (non-prelim): 147030
length of query: 745
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 595
effective length of database: 8,839,720,017
effective search space: 5259633410115
effective search space used: 5259633410115
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 81 (35.8 bits)