BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11701
(745 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P20241|NRG_DROME Neuroglian OS=Drosophila melanogaster GN=Nrg PE=1 SV=2
Length = 1302
Score = 523 bits (1346), Expect = e-147, Method: Compositional matrix adjust.
Identities = 266/490 (54%), Positives = 338/490 (68%), Gaps = 11/490 (2%)
Query: 6 RSEYKIGNRILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQT 65
RSEYKIGN++LL+V G+SASQN+H P +QYV+R++ +ALR K++ELFCI+GGTPLPQT
Sbjct: 219 RSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQT 278
Query: 66 IWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAA 125
+WSKDG I SDRI+QG+YGKSL+I+ F D G+YTC+VSNGVG A+S+SI L+V +
Sbjct: 279 VWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIILNVNSV 338
Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
PYFT EPE AAE+E V FEC+A+G+PEP+I W+HNGKPI Q+ PNPRR V N I I
Sbjct: 339 PYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNPRRTVTDNTIRII 398
Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGA 245
NL K DTGNYGCNATNSLGYVYKDVY+NV A P I+EAP TVDG+ V + CRV G+
Sbjct: 399 NLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVDGRNVTIKCRVNGS 458
Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK 305
PKP V W+ LTGGRY + GDL+I DV F+D+G+YTC+A+NK G Q GSL VK
Sbjct: 459 PKPLVKWLRASNWLTGGRYNVQANGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVK 518
Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
EHT IT +P++YEV AGQSATFRCN D +L++ I W + + IDFE++PRFV++ND S
Sbjct: 519 EHTRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSIDFEAQPRFVKTNDNS 578
Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
LT+ K+ ELDSG+YTC A+T LD A+A L VQ AP T I A KA + W
Sbjct: 579 LTIAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAPK-LTGI-TCQADKAEIHWEQ 636
Query: 426 VSPQSLRGHFRGYKVQ---TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLA 482
R Y +Q ++T + + E + N S ++ P + RV+A
Sbjct: 637 QGDN--RSPILHYTIQFNTSFTPASWDAAY-EKVPNTDSSFVVQMS---PWANYTFRVIA 690
Query: 483 FNGAYNGPPS 492
FN PPS
Sbjct: 691 FNKIGASPPS 700
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/241 (48%), Positives = 156/241 (64%), Gaps = 10/241 (4%)
Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
PL+AP+NFT+ Q+ + ++W PVS +S+RGHF+GYK+QTWTE +GE +RE+ V KG
Sbjct: 815 PLDAPTNFTMRQITSSTSGYMAWTPVSEESVRGHFKGYKIQTWTENEGEEGLREIHV-KG 873
Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
++ V +F P SKN+AR+LA+NG +NGPPS +I F TPEGVP VQ L+A PLGSSAF
Sbjct: 874 DTHNALVTQFKPDSKNYARILAYNGRFNGPPSAVIDFDTPEGVPSPVQGLDAYPLGSSAF 933
Query: 521 YLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRI 580
L W KP PNG L GYKI Y+ VK + VG E P+I+DP T K+AGL+P++KYRI
Sbjct: 934 MLHWKKPLYPNGKLTGYKIYYEEVKESYVGERREYDPHITDPRVTRMKMAGLKPNSKYRI 993
Query: 581 HLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
+ TK G+G+E Y+ K+ NV P SW +P A K+RI
Sbjct: 994 SITATTKMGEGSE-HYIEKTTLKDAVNV-----APATPSFSWEQLPSDNGLA---KFRIN 1044
Query: 641 W 641
W
Sbjct: 1045 W 1045
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 163/597 (27%), Positives = 257/597 (43%), Gaps = 69/597 (11%)
Query: 147 CKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV 206
C G P P+ W +G+ I + + G + + I D G Y C+ +N +G
Sbjct: 268 CIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKS-LVIRQTNFDDAGTYTCDVSNGVGNA 326
Query: 207 YKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG---- 262
+ + P T+ P+ + + VV CR G P+P+++WIHN K +
Sbjct: 327 QSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNP 386
Query: 263 RYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK-EHTHITDQPEDYEVEA 321
R T+ + ++I ++ D+G Y C A N LG L V+ E I++ P
Sbjct: 387 RRTVTDN-TIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVD 445
Query: 322 GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF-VQSNDYSLTVTKSSELDSGQYT 380
G++ T +C P K + WLR S ++ + R+ VQ+N L + + D+G+YT
Sbjct: 446 GRNVTIKCRVNGSP--KPLVKWLRAS---NWLTGGRYNVQANG-DLEIQDVTFSDAGKYT 499
Query: 381 CRAQTELDFIEAQATLTVQVPL---EAPSNFTLIQVIDAKKAVVSWNPVSPQSLR----- 432
C AQ + I+A +L V+ + P N+ +V + A N +L
Sbjct: 500 CYAQNKFGEIQADGSLVVKEHTRITQEPQNY---EVAAGQSATFRCNEAHDDTLEIEIDW 556
Query: 433 ---GHFRGYKVQTWTEKDGEGSI---RELIVNKGESTTTEVDKFVPASKNFARV-LAFNG 485
G ++ Q K + S+ + + ++ GE T + A+ AR L
Sbjct: 557 WKDGQSIDFEAQPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEAT---ARANLIVQD 613
Query: 486 AYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVK 545
N P L I + + W + ++ Y I++
Sbjct: 614 VPNAP------------------KLTGITCQADKAEIHWEQQGDNRSPILHYTIQFN--- 652
Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY------ 599
T P Y P T S+ + + P Y + + K G S +
Sbjct: 653 -TSFTPASWDAAYEKVPNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPD 711
Query: 600 VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
VPFKNPDNV G+G+ PNNLVISWT MPEIEHNAP+F Y + W+R AW +++ DWR
Sbjct: 712 VPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWR 771
Query: 660 QSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 716
Q+ +V+A+QPTF Y IKVV + + E++ GE D+ + A NF
Sbjct: 772 QNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGE------DRPLDAPTNF 822
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 170/423 (40%), Gaps = 58/423 (13%)
Query: 43 EVALRNKKVE----LFCIFGGTPLPQTIWSKDGVPIN---PSDRISQGNYGKSLIIKHVE 95
+VA +NK+ + + C G P P+ W K+G + +R+ + +L+I +
Sbjct: 43 KVAQQNKESDNPFIIECEADGQPEPEYSWIKNGKKFDWQAYDNRMLRQPGRGTLVITIPK 102
Query: 96 FSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE-PEFINAAEEETVTFECKA-SGLP 153
D+G Y C SN G A S S+ + F E + + A E E +C A G P
Sbjct: 103 DEDRGHYQCFASNEFGTATSNSVYVRKAELNAFKDEAAKTLEAVEGEPFMLKCAAPDGFP 162
Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--------NLRKSDTGN---YGCNATNS 202
P ++W+ I ++ + + +R+T++ N+ + D + Y C+AT+
Sbjct: 163 SPTVNWM-----IQESIDGSIKSINNSRMTLDPEGNLWFSNVTREDASSDFYYACSATSV 217
Query: 203 LGYVYK---DVYVNVL---AHAPEITEAPKDEY-------TVDGKTVVLTCRVFGAPKPE 249
YK V ++V A + P +Y + GK + L C G P P+
Sbjct: 218 FRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQ 277
Query: 250 VNW------IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG-SGSL 302
W I +T G Y L I F D+G YTC N +G AQ S L
Sbjct: 278 TVWSKDGQRIQWSDRITQGHY----GKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIIL 333
Query: 303 TVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
V + T +PE + F C A P K+S W+ +PI+ +
Sbjct: 334 NVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKIS--WIHNGKPIEQSTPNPRRTVT 391
Query: 363 DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP----LEAPSNFTLIQVIDAKK 418
D ++ + + D+G Y C A L ++ L VQ EAP+ + +D +
Sbjct: 392 DNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPA---AVSTVDGRN 448
Query: 419 AVV 421
+
Sbjct: 449 VTI 451
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 51/71 (71%), Gaps = 4/71 (5%)
Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
F+ Y+I QTWTE +GE +RE+ V KG++ V +F P SKN+AR+LA+NG +NGPP
Sbjct: 849 FKGYKI---QTWTENEGEEGLREIHV-KGDTHNALVTQFKPDSKNYARILAYNGRFNGPP 904
Query: 731 SEIISFVTPEG 741
S +I F TPEG
Sbjct: 905 SAVIDFDTPEG 915
>sp|P97685|NFASC_RAT Neurofascin OS=Rattus norvegicus GN=Nfasc PE=1 SV=2
Length = 1240
Score = 228 bits (582), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 192/373 (51%), Gaps = 10/373 (2%)
Query: 39 TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
T ++ LR + L CI G P P W K G + PSD+ N+ K+L I +V D
Sbjct: 252 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 310
Query: 99 QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
G Y C SN +G + ++I + V AAPY+ EP+ + A E C+A+G P+P +
Sbjct: 311 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 369
Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
W+ NG P+ APPNP R+V + I + + S Y CN +N GY+ + +V+VL
Sbjct: 370 WLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 429
Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
P + +P+++ + L C FG+P P + W N + L GG Y + E G L+I
Sbjct: 430 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 488
Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
+ D G YTC A N LG A+ L VK+ T I PED + G + C D
Sbjct: 489 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHD 548
Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
PSLKL++ WL+ EP+ + ++ D SLT+ +E D G YTC A TELD A+A
Sbjct: 549 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKA 605
Query: 395 TLTVQVPLEAPSN 407
LTV P+N
Sbjct: 606 YLTVLADQATPTN 618
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 154/665 (23%), Positives = 263/665 (39%), Gaps = 75/665 (11%)
Query: 59 GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
G P P W + PI R+SQG+ G L +V D Q Y+C ++ + +
Sbjct: 167 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 225
Query: 113 AKSYSIDLSVLAA-----PYFTVEPEFINAAEE----ETVTFECKASGLPEPEIHWVHNG 163
+++ + P F + P+ ++++ + EC ASG+P P+I W G
Sbjct: 226 KNPFTLKVLTTRGVAERTPSF-MYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKG 284
Query: 164 KPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
+ P + + N+ + I N+ + D+G Y C A+N +G + + V V A AP
Sbjct: 285 GDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYWL 340
Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDV 277
+ PK+ G+ L CR G PKP V W+ N L R +T + D
Sbjct: 341 DEPKNLILAPGEDGRLVCRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDT--IIFRDT 398
Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
+ Y C N+ G + ++V + P + + R + S
Sbjct: 399 QISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSP 458
Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
++ W + + + + V N SL + + D G YTC A L E Q L
Sbjct: 459 IPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRLE 517
Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIRELI 456
V+ P T I + + V + H K+ +W + D I +
Sbjct: 518 VKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRM 570
Query: 457 VNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
+ +S T TE+D+ + +K + VLA P + + +
Sbjct: 571 KKEDDSLTIFGVAERDQGSYTCMASTELDQDL--AKAYLTVLADQAT---PTNRLAAL-- 623
Query: 500 PEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
P+G P + LE L + L W+ + N + Y ++++ + + G + +
Sbjct: 624 PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSKF- 681
Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRGS 613
P + ++ + L P Y+ + + G S + P NP +V+G G+
Sbjct: 682 --PGSVNSAVLHLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGT 739
Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
NN+ I+WT M P+ +Y + WRR T E WN +V W S V+ P + P
Sbjct: 740 RKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQTPVYVP 796
Query: 674 YEIKV 678
YEI+V
Sbjct: 797 YEIRV 801
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 120/296 (40%), Gaps = 30/296 (10%)
Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
+ + EC+A G P P HW N + I++ P + RR+ G I + + + G Y
Sbjct: 57 DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 116
Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
C A N G + ++ +P + D V +G + L C G P P + W+
Sbjct: 117 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 176
Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
+ E R + GDL ++V D +Y+C AR T Q T+K T
Sbjct: 177 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 236
Query: 310 --ITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
+ ++ + G S++ C A P+ I W + D S+
Sbjct: 237 RGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 292
Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
++ + +L +T SE DSG+Y C A ++ I ++ V+ L+ P N L
Sbjct: 293 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 348
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 9/172 (5%)
Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
++W P++ S G Y V+ W ++ + + V + +VP RV
Sbjct: 746 ITWTPMNATSAFGPNLRYIVK-WRRRETRETWNNVTVWGSRYVVGQTPVYVPYE---IRV 801
Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
A N GP E + + E +P + L+W PE PNG+L+GY ++
Sbjct: 802 QAENDFGKGPEPETVIGYSGEDLPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLR 861
Query: 541 YQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
Y GTK+G ++E P T + +P ++YR L+ T+ G G
Sbjct: 862 YVPFNGTKLGKQMVENF----SPNQTKFSVQRADPVSRYRFSLSARTQVGSG 909
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 29/208 (13%)
Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
N L P IT+ ++ VD + +++ C G P P +W N + R ++
Sbjct: 35 NELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 94
Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
+ D GEY CFARNK GTA L+ + ++ P E+ +
Sbjct: 95 RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 149
Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
V+ G T +CN P L ++ W+ S EPI + R Q ++ L +
Sbjct: 150 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 205
Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
D Y+C A+ I+ + T++V
Sbjct: 206 DMQTDYSCNARFHFTHTIQQKNPFTLKV 233
>sp|O94856|NFASC_HUMAN Neurofascin OS=Homo sapiens GN=NFASC PE=1 SV=4
Length = 1347
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 192/373 (51%), Gaps = 10/373 (2%)
Query: 39 TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
T ++ LR + L CI G P P W K G + PSD+ N+ K+L I +V D
Sbjct: 252 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSDKAKFENFNKALRITNVSEED 310
Query: 99 QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
G Y C SN +G + ++I + V AAPY+ EP+ + A E C+A+G P+P +
Sbjct: 311 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 369
Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
W+ NG+P+ APPNP R+V + I + + S Y CN +N GY+ + +V+VL
Sbjct: 370 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 429
Query: 219 PEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKI 274
P + +P+++ + L C FG+P P + W N + L GG Y + E G L+I
Sbjct: 430 PRML-SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEI 488
Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
+ D G YTC A N LG A+ L VK+ T I PED G + C D
Sbjct: 489 KMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHD 548
Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
PSLKL++ WL+ EP+ + ++ D SLT+ +E D G YTC A TELD A+A
Sbjct: 549 PSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA 605
Query: 395 TLTVQVPLEAPSN 407
LTV P+N
Sbjct: 606 YLTVLADQATPTN 618
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 155/666 (23%), Positives = 261/666 (39%), Gaps = 77/666 (11%)
Query: 59 GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTCEV----SNGVGE 112
G P P W + PI R+SQG+ G L +V D Q Y+C ++ + +
Sbjct: 167 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 225
Query: 113 AKSYSIDLSV----------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
+++ + P T + + + + EC ASG+P P+I W
Sbjct: 226 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD--LLLECIASGVPTPDIAWYKK 283
Query: 163 GKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
G + P + + N+ + I N+ + D+G Y C A+N +G + + V V A AP
Sbjct: 284 GGDL---PSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYW 339
Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITD 276
+ PK+ G+ L CR G PKP V W+ N + L R +T + D
Sbjct: 340 LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRD 397
Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
+ Y C N+ G + ++V + P + + R + S
Sbjct: 398 TQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGS 457
Query: 337 LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
++ W + + + + V N SL + + D G YTC A L E Q L
Sbjct: 458 PIPTLRWFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVRL 516
Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIREL 455
V+ P T I + + V + H K+ +W + D I
Sbjct: 517 EVKDP-------TRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNR 569
Query: 456 IVNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
+ + +S T TE+D+ + +K + VLA P + + +
Sbjct: 570 MKKEDDSLTIFGVAERDQGSYTCVASTELDQDL--AKAYLTVLADQAT---PTNRLAAL- 623
Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
P+G P + LE L + L W+ + N + Y ++++ + + G + Y
Sbjct: 624 -PKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQ-FQPGVWHDHSKY 681
Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGRG 612
P + ++ + L P Y+ + + G S + P NP +V+G G
Sbjct: 682 ---PGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEG 738
Query: 613 STPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
+ NN+ I+WT M P+ +Y + WRR T EAWN +V W S V+ P +
Sbjct: 739 TRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWN--NVTVW-GSRYVVGQTPVYV 795
Query: 673 PYEIKV 678
PYEI+V
Sbjct: 796 PYEIRV 801
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 17/225 (7%)
Query: 379 YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
Y R Q E DF + +V P AP+ ++V+++ + WN V +++
Sbjct: 797 YEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVK-VRVMNSTAISLQWNRVYSDTVQ 855
Query: 433 GHFRGYKVQTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
G R Y+ W E ++ R+ G+ V + P S ++ NG
Sbjct: 856 GQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRG 915
Query: 488 NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
+GP SE F TPEGVP + L+W PE PNG+++GY +KY + GT
Sbjct: 916 DGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLKYVAFNGT 975
Query: 548 KVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
KVG ++E P T + +P ++YR L+ T+ G G
Sbjct: 976 KVGKQIVENF----SPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 1016
Score = 59.7 bits (143), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 30/296 (10%)
Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
+ + EC+A G P P HW N + I++ P + RR+ G I + + + G Y
Sbjct: 57 DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 116
Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
C A N G + ++ +P + D V +G + L C G P P + W+
Sbjct: 117 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 176
Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVK---- 305
+ E R + GDL ++V D +Y+C AR T Q T+K
Sbjct: 177 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 236
Query: 306 ----EHTHITDQPE----DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
E T P+ V G C A P+ I W + D S+
Sbjct: 237 RGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSDKA 292
Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
++ + +L +T SE DSG+Y C A ++ I ++ V+ L+ P N L
Sbjct: 293 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 348
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 29/208 (13%)
Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
N L P IT+ ++ VD + +++ C G P P +W N + R ++
Sbjct: 35 NELTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 94
Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
+ D GEY CFARNK GTA L+ + ++ P E+ +
Sbjct: 95 RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 149
Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
V+ G T +CN P L ++ W+ S EPI + R Q ++ L +
Sbjct: 150 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 205
Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
D Y+C A+ I+ + T++V
Sbjct: 206 DMQTDYSCNARFHFTHTIQQKNPFTLKV 233
>sp|Q92823|NRCAM_HUMAN Neuronal cell adhesion molecule OS=Homo sapiens GN=NRCAM PE=1 SV=3
Length = 1304
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/394 (35%), Positives = 199/394 (50%), Gaps = 21/394 (5%)
Query: 46 LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
LR + L CI G P P W+K DG + P +R N+ K+L I HV +D G+Y C
Sbjct: 283 LRGNVLSLECIAEGLPTPIIYWAKEDG--MLPKNRTVYKNFEKTLQIIHVSEADSGNYQC 340
Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
N +G A ++I + V AAPY+ P+ + + E T C+A+G P+P I W+ NG
Sbjct: 341 IAKNALG-AIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGV 399
Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
PI AP +P RK+ + I N+++ + Y CNA+N GY+ + +VNVLA P I
Sbjct: 400 PIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTP 459
Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
Y V + +L C FG+P P + W K L Y + E G L+I
Sbjct: 460 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDS 519
Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
+G YTC ARNKLG A+ L +K+ T I QPE V+ G +F C D +L L++
Sbjct: 520 TGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTV 579
Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
+WL+ + + S+ RF D+ L V S+ DSG YTC A T LD + A A L+V P
Sbjct: 580 LWLKDNR--ELPSDERFTVDKDH-LVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAP 636
Query: 402 LEAPS----------NFTLIQVIDAKKAVVSWNP 425
P+ + L +D K +SW P
Sbjct: 637 TPTPAPVYDVPNPPFDLELTDQLD-KSVQLSWTP 669
Score = 129 bits (324), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 147/564 (26%), Positives = 234/564 (41%), Gaps = 58/564 (10%)
Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
++ EC A GLP P I+W K P N R V N + I ++ ++D+GNY C A
Sbjct: 288 LSLECIAEGLPTPIIYW---AKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 342
Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK-- 257
N+LG ++ + V V A AP AP++ G+ L CR G PKP ++W+ N
Sbjct: 343 KNALGAIHHTISVRVKA-APYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI 401
Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
E+ + GD I ++V S Y C A N+ G + + V P +
Sbjct: 402 EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPAN 461
Query: 317 --YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
Y+V A + A C P +I W +G++ E +V + +L + + +
Sbjct: 462 TLYQVIANRPALLDCAFFGSP--LPTIEWFKGAKGSALH-EDIYVLHENGTLEIPVAQKD 518
Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVP--LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
+G YTC A+ +L + + L ++ P + + ++Q + ++VS+ +
Sbjct: 519 STGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQ----RGSMVSF-----ECKV 569
Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG--- 489
H + KD REL + E T + D V A + + N
Sbjct: 570 KHDHTLSLTVLWLKDN----RELPSD--ERFTVDKDHLVVADVSDDDSGTYTCVANTTLD 623
Query: 490 --PPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIK 540
S ++S V P P V + P + L W + N + + I+
Sbjct: 624 SVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIE 683
Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKY 596
Y+ P L T T+A+L L P Y + G A +Y
Sbjct: 684 YEDAMHK---PGLWHHQTEVSGTQTTAQLK-LSPYVNYSFRVMAVNSIGKSLPSEASEQY 739
Query: 597 LFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
L P KNP VEG GS P+NLVI+W + E N P +Y++ WR+ + + W
Sbjct: 740 LTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTS-- 797
Query: 655 VLDWRQSELVLANQPTFQPYEIKV 678
V+ S+ +++ PTF PY IKV
Sbjct: 798 VVVANVSKYIVSGTPTFVPYLIKV 821
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 12/201 (5%)
Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
+P+ AP N + V+++ A V W+PV +S+RGH +GY++ W + R I K
Sbjct: 844 LPMVAPGNVR-VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 902
Query: 460 -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
G T + P S V NG GP S F TPEGVP SL+ +
Sbjct: 903 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVN 962
Query: 515 LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
+ L+W P PNG+L Y +KYQ + T ++GPL++ ++P T L L
Sbjct: 963 PTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIP----ANKTRWTLKNL 1018
Query: 573 EPSTKYRIHLAGYTKAGDGAE 593
ST+Y+ + T AG G++
Sbjct: 1019 NFSTRYKFYFYAQTSAGSGSQ 1039
Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 137/605 (22%), Positives = 225/605 (37%), Gaps = 61/605 (10%)
Query: 53 LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
L C G P P+ W +GVPI +PS +I G ++I +V+ Y C S
Sbjct: 380 LICRANGNPKPRISWLTNGVPIEIAPDDPSRKID----GDTIIFSNVQERSSAVYQCNAS 435
Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE--FINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
N G + + ++VLA P + P +C G P P I W K
Sbjct: 436 NEYGYLLANAF-VNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK- 493
Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
A + N + I +K TG Y C A N LG +V++ + I +
Sbjct: 494 -GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIVKQ 551
Query: 225 PKDEYTVDGKTVVLTCRVFG--APKPEVNWIHNQKELTGGRYTILETGDLKITDVAFADS 282
P+ G V C+V V W+ + +EL ++ L + DV+ DS
Sbjct: 552 PEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDS 611
Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
G YTC A L + S L+V + P V + F + +
Sbjct: 612 GTYTCVANTTLDSVSASAVLSV-----VAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLS 666
Query: 343 WLRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQAT 395
W G + PI E E + + S + Q F + A +
Sbjct: 667 WTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNS 726
Query: 396 LTVQVPLEAPSNF-----------TLIQVIDAK--KAVVSWNPVSPQSLRGHFRGYKVQT 442
+ +P EA + T ++ + ++ V++W P++ G YKV +
Sbjct: 727 IGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV-S 785
Query: 443 WTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
W +KDG+ ++V N + + FVP +V A N P ++ + E
Sbjct: 786 WRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDMGFAPEPAVVMGHSGE 842
Query: 502 GVPGTVQ-SLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLERL 556
+P ++ + S+ + W V + G L GY+I Y + + + +E+
Sbjct: 843 DLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK 902
Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGSTP 615
+ T L GLEP + Y +++ G+G A +F P EG S P
Sbjct: 903 ILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP-------EGVPSAP 955
Query: 616 NNLVI 620
++L I
Sbjct: 956 SSLKI 960
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 126/315 (40%), Gaps = 49/315 (15%)
Query: 141 ETVTFECKASGLPEPEIHWVHNG-------KPISQAPPNPRRKVGPNRITIENLRKSDT- 192
E + +C+A G P P W NG P+ P G I I + K++T
Sbjct: 62 ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPG----TGTLIINIMSEGKAETY 117
Query: 193 -GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEV 250
G Y C A N G + V + +P T+ + T+ G+++VL CR P +
Sbjct: 118 EGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPI 177
Query: 251 N-WIHN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-NKLGTAQGSGSLTVK 305
W+ N Q+ R + GDL ++V D+ E Y C+AR N T Q ++VK
Sbjct: 178 IFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVK 237
Query: 306 E------HTHITDQPEDYEVEAGQSATFR--------CNAVSDPSLKLSIVWLRG----- 346
+ I D E +S+ R NA + L+ +++ L
Sbjct: 238 VISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGL 297
Query: 347 SEPIDFESEP-------RFVQSN-DYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
PI + ++ R V N + +L + SE DSG Y C A+ L I ++ V
Sbjct: 298 PTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRV 357
Query: 399 QVP---LEAPSNFTL 410
+ + AP N L
Sbjct: 358 KAAPYWITAPQNLVL 372
Score = 39.7 bits (91), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 11/146 (7%)
Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWI 253
+ C ++L + L P IT+ +Y +D + +V+ C G P P +W
Sbjct: 22 FLCQMISALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWT 81
Query: 254 HNQKELTGGRYTILE----TGDLKITDVAFADS----GEYTCFARNKLGTAQGSGSLTVK 305
N + ++ TG L I ++ + G Y C ARN+ G A + +
Sbjct: 82 RNGTHFDIDKDPLVTMKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRP 141
Query: 306 EHTHI--TDQPEDYEVEAGQSATFRC 329
+ + ++ E +++GQS C
Sbjct: 142 SRSPLWTKEKLEPITLQSGQSLVLPC 167
>sp|Q810U3|NFASC_MOUSE Neurofascin OS=Mus musculus GN=Nfasc PE=1 SV=1
Length = 1240
Score = 226 bits (575), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 189/372 (50%), Gaps = 8/372 (2%)
Query: 39 TRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSD 98
T ++ LR + L CI G P P W K G + PS++ N+ K+L I +V D
Sbjct: 252 TSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDL-PSNKAKFENFNKALRITNVSEED 310
Query: 99 QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH 158
G Y C SN +G + ++I + V AAPY+ EP+ + A E C+A+G P+P +
Sbjct: 311 SGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 369
Query: 159 WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
W+ NG+P+ APPNP R+V + I + + S Y CN +N GY+ + +V+VL
Sbjct: 370 WMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVP 429
Query: 219 PEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKIT 275
P + A V L C FG+P P + W N + L GG Y + E G L+I
Sbjct: 430 PRMLSARNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIK 489
Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
+ D G YTC A N LG A+ L VK+ T I PED + G + C DP
Sbjct: 490 MIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHDP 549
Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
SLKL++ WL+ EP+ + ++ D SLT+ +E D G YTC A TELD A+A
Sbjct: 550 SLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKAY 606
Query: 396 LTVQVPLEAPSN 407
LTV P+N
Sbjct: 607 LTVLADQATPTN 618
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 156/667 (23%), Positives = 264/667 (39%), Gaps = 79/667 (11%)
Query: 59 GTPLPQTIWSKDGV-PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGE 112
G P P W + PI R+SQG+ G L +V D Q Y+C ++ + +
Sbjct: 167 GLPSPVIFWMSSSMEPITQDKRVSQGHNG-DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 225
Query: 113 AKSYSIDLSVLAA-----PYFTVEPEFINAAEE----ETVTFECKASGLPEPEIHWVHNG 163
+++ + P F + P+ ++++ + EC ASG+P P+I W G
Sbjct: 226 KNPFTLKVLTTRGVAERTPSF-MYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKG 284
Query: 164 KPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
+ P N + N+ + I N+ + D+G Y C A+N +G + + V V A AP
Sbjct: 285 GDL---PSNKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-APYWL 340
Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKITDV 277
+ PK+ G+ L CR G PKP V W+ N + L R +T + D
Sbjct: 341 DEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT--IIFRDT 398
Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKE--HTHITDQPEDYEVEAGQSATFRCNAVSDP 335
+ Y C N+ G + ++V + ++ + + V C P
Sbjct: 399 QISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSARNQLIRVILYNRTRLDCPFFGSP 458
Query: 336 SLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
L W + + + + V N SL + + D G YTC A L E Q
Sbjct: 459 IPTLR--WFKNGQGSNLDGGNYHVYENG-SLEIKMIRKEDQGIYTCVATNILGKAENQVR 515
Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TWTEKDGEGSIRE 454
L V+ P T I + + V + H K+ +W + D I
Sbjct: 516 LEVKDP-------TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 568
Query: 455 LIVNKGESTT-----------------TEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
+ + +S T TE+D+ + +K + VLA P + + +
Sbjct: 569 RMKKEDDSLTIFGVAERDQGSYTCMASTELDQDL--AKAYLTVLADQAT---PTNRLAAL 623
Query: 498 VTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLP 557
P+G P + LE L + L W+ + N + Y ++++ + + G +
Sbjct: 624 --PKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ-FQPGVWHDHSR 680
Query: 558 YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPFKNPDNVEGR 611
+ P + ++ + L P Y+ + + G S + P NP +V+G
Sbjct: 681 F---PGSVNSAVLHLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGE 737
Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
G+ NN+ I+WT M P+ +Y + WRR T E WN +V W S V+ P +
Sbjct: 738 GTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWN--NVTVW-GSRYVVGQTPVY 794
Query: 672 QPYEIKV 678
PYEI+V
Sbjct: 795 VPYEIRV 801
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 119/296 (40%), Gaps = 30/296 (10%)
Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSD--TGNY 195
+ + EC+A G P P HW N + I++ P + RR+ G I + + + G Y
Sbjct: 57 DNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEY 116
Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
C A N G + ++ +P + D V +G + L C G P P + W+
Sbjct: 117 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWM 176
Query: 254 HNQKE--LTGGRYTILETGDLKITDVAFAD-SGEYTCFARNKL-GTAQGSGSLTVKEHTH 309
+ E R + GDL ++V D +Y+C AR T Q T+K T
Sbjct: 177 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTT 236
Query: 310 --ITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
+ ++ + G S++ C A P+ I W + D S
Sbjct: 237 RGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPT--PDIAWYKKGG--DLPSNKA 292
Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
++ + +L +T SE DSG+Y C A ++ I ++ V+ L+ P N L
Sbjct: 293 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLIL 348
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 9/172 (5%)
Query: 421 VSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
++W P++ S G Y V+ W ++ + + V + +VP RV
Sbjct: 746 ITWTPMNATSAFGPNLRYIVK-WRRRETRETWNNVTVWGSRYVVGQTPVYVPYE---IRV 801
Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
A N GP + I + E +P + L+W PE PNG+L+GY ++
Sbjct: 802 QAENDFGKGPEPDTIIGYSGEDLPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYILR 861
Query: 541 YQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
Y GTK+G ++E P T + +P ++YR L+ T+ G G
Sbjct: 862 YVPFNGTKLGKQMVENF----SPNQTKFSVQRADPVSRYRFSLSARTQVGSG 909
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 29/208 (13%)
Query: 213 NVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILE 268
N L P IT+ ++ VD + +++ C G P P +W N + R ++
Sbjct: 35 NELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 94
Query: 269 TGDLKITDVAFAD-----SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP----EDYE- 318
+ D GEY CFARNK GTA L+ + ++ P E+ +
Sbjct: 95 RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA-----LSNRIRLQVSKSPLWPKENLDP 149
Query: 319 --VEAGQSATFRCNAVSDPSLKLSIV-WLRGS-EPIDFESEPRFVQSNDYSLTVTKSSEL 374
V+ G T +CN P L ++ W+ S EPI + R Q ++ L +
Sbjct: 150 VVVQEGAPLTLQCNP--PPGLPSPVIFWMSSSMEPI--TQDKRVSQGHNGDLYFSNVMLQ 205
Query: 375 D-SGQYTCRAQTELDF-IEAQATLTVQV 400
D Y+C A+ I+ + T++V
Sbjct: 206 DMQTDYSCNARFHFTHTIQQKNPFTLKV 233
>sp|O42414|NFASC_CHICK Neurofascin OS=Gallus gallus GN=NFASC PE=1 SV=1
Length = 1369
Score = 222 bits (565), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 133/375 (35%), Positives = 192/375 (51%), Gaps = 13/375 (3%)
Query: 37 YVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEF 96
Y T ++ LR + L CI G P P +W K G + P+ + N+ K+L I +V
Sbjct: 268 YGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGGEL-PAGKTKLENFNKALRISNVSE 326
Query: 97 SDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPE 156
D G Y C SN +G + ++I + V AAPY+ EP+ + A E C+A+G P+P
Sbjct: 327 EDSGEYFCLASNKMGSIR-HTISVRVKAAPYWLDEPQNLILAPGEDGRLVCRANGNPKPS 385
Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
I W+ NG+PI +PPNP R+V + I + + + Y CNA+N GY+ + +V+VL
Sbjct: 386 IQWLVNGEPIEGSPPNPSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLD 445
Query: 217 HAPEITEAPKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDL 272
P I AP+++ + L C FG+P P + W N + L GG Y E G L
Sbjct: 446 VPPRIL-APRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQGNMLDGGNYKAHENGSL 504
Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAV 332
+++ D G YTC A N LG + L VK+ T I PED V+ G C
Sbjct: 505 EMSMARKEDQGIYTCVATNILGKVEAQVRLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVK 564
Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
DP+LKL++ WL+ P+ + ++ D LT+ +E D G YTC A TELD A
Sbjct: 565 HDPTLKLTVTWLKDDAPLYIGNR---MKKEDDGLTIYGVAEKDQGDYTCVASTELDKDSA 621
Query: 393 QATLTVQVPLEAPSN 407
+A LTV L P+N
Sbjct: 622 KAYLTV---LAIPAN 633
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 152/668 (22%), Positives = 257/668 (38%), Gaps = 96/668 (14%)
Query: 73 PINPSDRISQGNYGKSLIIKHVEFSD-QGSYTC----EVSNGVGEAKSYSIDLSV----- 122
PI+ R+SQG G L +V D Q Y+C ++ + + Y++ +
Sbjct: 183 PIHQDKRVSQGQNG-DLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTKKPHN 241
Query: 123 ----------------------LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV 160
PY T + + + + EC ASG+P P+I W
Sbjct: 242 ETSLRNHTDMYSARGVTETTPSFMYPYGTSSSQMVLRGVD--LLLECIASGVPAPDIMWY 299
Query: 161 HNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
G + P + N+ + I N+ + D+G Y C A+N +G + + V V A AP
Sbjct: 300 KKG---GELPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKA-AP 355
Query: 220 EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILETGDLKI 274
+ P++ G+ L CR G PKP + W+ N + + G R +T +
Sbjct: 356 YWLDEPQNLILAPGEDGRLVCRANGNPKPSIQWLVNGEPIEGSPPNPSREVAGDT--IVF 413
Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSD 334
D S Y C A N+ G + ++V + P + ++ Q R +
Sbjct: 414 RDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRILAPRNQLIKVIQYNRTRLDCPFF 473
Query: 335 PSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
S ++ W + + + N SL ++ + + D G YTC A L +EAQ
Sbjct: 474 GSPIPTLRWFKNGQGNMLDGGNYKAHENG-SLEMSMARKEDQGIYTCVATNILGKVEAQV 532
Query: 395 TLTVQVPLE--------------APSNFTLIQVIDAKKAVVSW-NPVSPQSLRGHFRGYK 439
L V+ P P ++ K V+W +P + +
Sbjct: 533 RLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMK--- 589
Query: 440 VQTWTEKDGEGSIRELIVNKGEST---TTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS 496
E DG ++G+ T +TE+DK ++K + VLA P + +
Sbjct: 590 ----KEDDGLTIYGVAEKDQGDYTCVASTELDK--DSAKAYLTVLAI------PANRLRD 637
Query: 497 FVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERL 556
P+ P + LE L + L W+ + N + Y ++++ + + G
Sbjct: 638 L--PKERPDRPRDLELSDLAERSVKLTWIPGDDNNSPITDYIVQFEEDR-FQPGTWHNHS 694
Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES----KYLF--YVPFKNPDNVEG 610
Y P ++ L L P Y+ + G S +Y P NP V+G
Sbjct: 695 RY---PGNVNSALLSLSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTGVQG 751
Query: 611 RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT 670
G+ NN+ I+WT + + P+ +Y + WRR + +W + V R V+ N P
Sbjct: 752 AGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRH---VVWNTPI 808
Query: 671 FQPYEIKV 678
+ PYEIKV
Sbjct: 809 YVPYEIKV 816
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 146/643 (22%), Positives = 240/643 (37%), Gaps = 106/643 (16%)
Query: 15 ILLNVIATGISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPI 74
+L N + + AP+ Q + ++ + L C F G+P+P W K+G
Sbjct: 435 LLANAFVSVLDVPPRILAPRNQLIK-----VIQYNRTRLDCPFFGSPIPTLRWFKNG--- 486
Query: 75 NPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTV 130
+ + GNY SL + DQG YTC +N +G+ ++ + L V
Sbjct: 487 -QGNMLDGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEA-QVRLEVKDPTRIVR 544
Query: 131 EPEFINAAEEETVTFECKASGLPEPE--IHWVHNGKPISQAPPNPRRKVGPNRITIENLR 188
PE C+ P + + W+ + P+ R K + +TI +
Sbjct: 545 GPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGN---RMKKEDDGLTIYGVA 601
Query: 189 KSDTGNYGCNATNSLGYVYKDVYV-------NVLAHAP-EITEAPKDEYTVD--GKTVVL 238
+ D G+Y C A+ L Y+ N L P E + P+D D ++V L
Sbjct: 602 EKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDLPKERPDRPRDLELSDLAERSVKL 661
Query: 239 T--------------CRVFGAPKPEVNWIHNQKELTGG--------------RYTILETG 270
T F + + HN G ++ ++
Sbjct: 662 TWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHSRYPGNVNSALLSLSPYVNYQFRVIAVN 721
Query: 271 DLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN 330
D+ + + T AR ++ G+ T K + IT P + G
Sbjct: 722 DVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYG-------- 773
Query: 331 AVSDPSLKLSIVWLR----GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
P+L+ + W R GS + PR V N Y + Q E
Sbjct: 774 ----PNLRYIVRWRRRDPRGSWYNETVKAPRHVVWNTPIYV----------PYEIKVQAE 819
Query: 387 LDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
DF A T P AP++ I+V+++ ++W V +++G + Y+
Sbjct: 820 NDFGRAPEPETYIGYSGEDYPKAAPTDVR-IRVLNSTAIALTWTRVHLDTIQGQLKEYRA 878
Query: 441 QTWTEKDGEGSI-----RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
W + ++ R+ + G+ V + P S ++ NG +GP SE+
Sbjct: 879 YFWRDSSLLKNLWVSKKRQYVSFPGDRNRGIVSRLFPYSNYKLEMVVTNGRGDGPRSEVK 938
Query: 496 SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQS------VKGTKV 549
F TPEGVP + + L + L+W PE PNGVL GY ++YQ+ V G+K
Sbjct: 939 EFPTPEGVPSSPRYLRIRQPNLESINLEWDHPEHPNGVLTGYNLRYQASCLSSPVNGSKT 998
Query: 550 G-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
G L+E P T + +P ++YR L T+ GDG
Sbjct: 999 GRTLVENF----SPNQTRFTVQRTDPISRYRFFLRARTQVGDG 1037
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 89/222 (40%), Gaps = 37/222 (16%)
Query: 215 LAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWIHNQKELT------------G 261
L P IT+ +Y VD + + + C G P P +W N K
Sbjct: 38 LPQPPTITKQSVKDYIVDPRDNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRS 97
Query: 262 GRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQP------- 314
G I G + D GEY CFARN GTA L+ K H ++ P
Sbjct: 98 GTLVIDFHGGGRPDDY----EGEYQCFARNDYGTA-----LSSKIHLQVSRSPLWPKEKV 148
Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS-EPIDFESEPRFVQSND--YSLTVTKS 371
+ EV+ G + +CN + I W+ S EPI + Q+ D +S + +
Sbjct: 149 DVIEVDEGAPLSLQCNPPPGLPPPV-IFWMSSSMEPIHQDKRVSQGQNGDLYFSNVMLQD 207
Query: 372 SELDSGQYTCRAQTELDF-IEAQATLTVQVPLEAPSNFTLIQ 412
++ D Y+C A+ I+ + T++V + P N T ++
Sbjct: 208 AQTD---YSCNARFHFTHTIQQKNPYTLKVKTKKPHNETSLR 246
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 124/319 (38%), Gaps = 59/319 (18%)
Query: 141 ETVTFECKASGLPEPEIHWVHNGK--PISQAPP-NPRRKVGPNRITIENLRKSDT--GNY 195
+ + EC+A G P P W NGK +++ P + RR+ G I + D G Y
Sbjct: 58 DNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHGGGRPDDYEGEY 117
Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNW-- 252
C A N G ++ +P + D VD G + L C P V +
Sbjct: 118 QCFARNDYGTALSSKIHLQVSRSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPPPVIFWM 177
Query: 253 ------IHNQKELTGGRYTILETGDLKITDVAFADS-GEYTCFARN-------------- 291
IH K ++ G + GDL ++V D+ +Y+C AR
Sbjct: 178 SSSMEPIHQDKRVSQG-----QNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTL 232
Query: 292 KLGTAQGSGSLTVKEHTH------ITDQPEDYEVEAGQSAT----------FRCNAVSDP 335
K+ T + +++ HT +T+ + G S++ C A P
Sbjct: 233 KVKTKKPHNETSLRNHTDMYSARGVTETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVP 292
Query: 336 SLKLSIVWL-RGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
+ I+W +G E + +++ + +L ++ SE DSG+Y C A ++ I
Sbjct: 293 A--PDIMWYKKGGE---LPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTI 347
Query: 395 TLTVQVP---LEAPSNFTL 410
++ V+ L+ P N L
Sbjct: 348 SVRVKAAPYWLDEPQNLIL 366
>sp|Q3UH53|SDK1_MOUSE Protein sidekick-1 OS=Mus musculus GN=Sdk1 PE=2 SV=1
Length = 2193
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 191/622 (30%), Positives = 272/622 (43%), Gaps = 38/622 (6%)
Query: 42 KEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
+ V + + L CI P+ + W ++GV R++ G +YG+ L I + +
Sbjct: 284 RSVVAGSSETTLECIANARPVEELSVHWKRNGV------RLTSGLHSYGRRLTITNPTSA 337
Query: 98 DQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPE 154
D G Y CE + E LS++ PYFT EPE I EET+ C+A G+P
Sbjct: 338 DTGMYVCEATLRGSTFEPARARAFLSIIEPPYFTAEPESRILGEVEETMDIPCRAMGVPL 397
Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
P + W + P+S+ NPR KV P+ + I+ L D+G + C A+N G V Y++
Sbjct: 398 PTLQWYKDAVPLSKLQ-NPRYKVLPSGGLHIQKLSPEDSGIFQCFASNEGGEVQTHTYLD 456
Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
V AP T+ P D DG T VL C V GAPKP + W L G R+ +LE
Sbjct: 457 VTNIAPAFTQRPVDTTVTDGMTAVLRCEVSGAPKPAITWKRGNHILASGSVRIPRFMLLE 516
Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
+G L+I V D+G YTC+A N + S LTV T I PED V G +AT
Sbjct: 517 SGGLRIAPVFIQDAGNYTCYAANTEASVNASAMLTVWNRTSIVHPPEDRVVIKGTTATLC 576
Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
C A DP L VW + + I S R V D SL ++++ D G YTC +E
Sbjct: 577 CGATHDPRTSLRYVWKKDNVVITASSSSRIVVEKDGSLVISQTWSGDIGDYTCEIISEGG 636
Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
A L V + L P L + A+ V+ + V P Y VQ +E +
Sbjct: 637 SDSRTARLEV-IELPHPPQNLLASLSPARSHSVTLSWVRPFDGNSPVLYYIVQV-SENNS 694
Query: 449 EGSIRELIVNKG-ESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGT 506
+ + N G E T V PA RV A N G S E + PE P
Sbjct: 695 PWKVH--LSNVGPEMTGVTVSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSA 752
Query: 507 -VQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
+++ A + + ++W P + NGVL GY ++Y+ + G P + IS P
Sbjct: 753 PPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYR-LAGL---PGEHQQRNISSPE 808
Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEGRGSTPNNL 618
+ L T+Y I +A Y AG G S+ L VP P NV+ +
Sbjct: 809 VNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQAEAVNSTTV 868
Query: 619 VISWTAMPEIEHNAPHFKYRIF 640
W P+ N + Y++
Sbjct: 869 HFLWNPPPQQFINGINQGYKLL 890
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 175/692 (25%), Positives = 272/692 (39%), Gaps = 92/692 (13%)
Query: 35 QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV 94
Q+ + AL N + C P PQ W ++G I PS RI+ L+I
Sbjct: 180 QRKTVSQGHAALLNLLPIVSC-----PQPQVTWFREGHKIIPSSRIAI-TLENQLVILAT 233
Query: 95 EFSDQGSYTCEVSN-GVGEAK-SYSIDLSV--------LAAPYFTVEP--EFINAAEEET 142
SD G+Y + N GE K S I LSV AP V P + A ET
Sbjct: 234 TASDAGAYYVQAVNEKNGENKTSPFIHLSVARDTGTHEAMAPIIVVAPGNRSVVAGSSET 293
Query: 143 VTFECKASGLP--EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
T EC A+ P E +HW NG ++ + R R+TI N +DTG Y C AT
Sbjct: 294 -TLECIANARPVEELSVHWKRNGVRLTSGLHSYGR-----RLTITNPTSADTGMYVCEAT 347
Query: 201 ---NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ 256
++ +++++ P T P+ + +T+ + CR G P P + W +
Sbjct: 348 LRGSTFEPARARAFLSII-EPPYFTAEPESRILGEVEETMDIPCRAMGVPLPTLQWYKDA 406
Query: 257 ---KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHITD 312
+L RY +L +G L I ++ DSG + CFA N+ G Q L V T
Sbjct: 407 VPLSKLQNPRYKVLPSGGLHIQKLSPEDSGIFQCFASNEGGEVQTHTYLDVTNIAPAFTQ 466
Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTK 370
+P D V G +A RC P K +I W RG+ + S PRF+ L +
Sbjct: 467 RPVDTTVTDGMTAVLRCEVSGAP--KPAITWKRGNHILASGSVRIPRFMLLESGGLRIAP 524
Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTV---QVPLEAPSNFTLIQVIDAKKAV-VSWNPV 426
D+G YTC A + A A LTV + P + +I+ A + +P
Sbjct: 525 VFIQDAGNYTCYAANTEASVNASAMLTVWNRTSIVHPPEDRVVIKGTTATLCCGATHDPR 584
Query: 427 SPQSLRGHFRGYKV--------QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFA 478
+ SLR ++ V + EKDG I + T E+ + A
Sbjct: 585 T--SLRYVWKKDNVVITASSSSRIVVEKDGSLVISQTWSGDIGDYTCEIISEGGSDSRTA 642
Query: 479 RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
R+ + PP +++ ++P S + L WV+P N ++ Y
Sbjct: 643 RLEVIELPH--PPQNLLASLSPA--------------RSHSVTLSWVRPFDGNSPVLYYI 686
Query: 539 IKYQ------SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG- 591
++ V + VGP + T ++GL P+ Y+ + + G G
Sbjct: 687 VQVSENNSPWKVHLSNVGPEM-----------TGVTVSGLTPARTYQFRVCAVNQVGKGQ 735
Query: 592 --AESKYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNT 646
E+ L P P N+ G T ++++ W PE EHN Y + +R
Sbjct: 736 YSTETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGL 795
Query: 647 GEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
Q ++ + ++ + + YEI+V
Sbjct: 796 PGEHQQRNISSPEVNYCLVTDLIIWTQYEIQV 827
Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 99/238 (41%), Gaps = 19/238 (7%)
Query: 389 FIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
F A T+Q VP P N + +++ WNP Q + G +GYK+ W
Sbjct: 838 FSRAVTEYTLQGVPTAPPQNVQ-AEAVNSTTVHFLWNPPPQQFINGINQGYKLLAWPADA 896
Query: 448 GEG----SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGV 503
E +I T + KF + F VL F +GPPS T E
Sbjct: 897 PETVTVVTIAPDFHGIHHGYITNLKKF---TAYFTSVLCFTTPGDGPPSSPQLVWTHEDK 953
Query: 504 PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
PG V L + ++ + W +P + NG++MGY+I ++ G RL + + T
Sbjct: 954 PGAVGHLSFTEILDTSLKVSWQEPLERNGIIMGYQISWEV-----YGRNDSRLTHTLNST 1008
Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVIS 621
K+ GL T Y I +A T AG G + + P ++ G P+NLVIS
Sbjct: 1009 MHEYKIQGLSSLTTYTIDVAALTAAGVGVTTSST--ISSGVPPDLPG---APSNLVIS 1061
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 391 EAQATLTVQV------PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWT 444
E+ A++ V+V P AP N + + A + V+W+P P+S G+ +GYKV W
Sbjct: 1667 ESPASVPVEVFVGEAAPAMAPQNVQ-VTPLTASQLEVTWDPPPPESQNGNIQGYKVYYW- 1724
Query: 445 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVP 504
E D ++ V ++ +K + AFN A +GP S+ T + P
Sbjct: 1725 EADSRNETEKMKVLFLPEPVVKIKDLTSHTKYLISISAFNAAGDGPKSDPCQGRTHQAAP 1784
Query: 505 GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
G L + S+ + W +P NG+L GY++ Y+
Sbjct: 1785 GPPSFLAFSEITSTTLNVSWGEPSAANGILQGYRVVYE 1822
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 101/275 (36%), Gaps = 29/275 (10%)
Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
APYF EP E + C A G E W+ N ++ +
Sbjct: 85 APYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWIRNDSELTT-------YSSEYKYI 137
Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR-V 242
I +L+K D G Y C N +G + + +A+ + + + G +L +
Sbjct: 138 IPSLQKLDAGFYRCVVRNRMGALLQRKSEIQVAYMGNFMDTDQRKTVSQGHAALLNLLPI 197
Query: 243 FGAPKPEVNWIH-NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNK--------- 292
P+P+V W K + R I L I +D+G Y A N+
Sbjct: 198 VSCPQPQVTWFREGHKIIPSSRIAITLENQLVILATTASDAGAYYVQAVNEKNGENKTSP 257
Query: 293 ---LGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSE 348
L A+ +G+ I P + V AG S T C A + P +LS+ W R
Sbjct: 258 FIHLSVARDTGTHEAMAPI-IVVAPGNRSVVAGSSETTLECIANARPVEELSVHWKRNG- 315
Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
+ S + S LT+T + D+G Y C A
Sbjct: 316 -VRLTSG---LHSYGRRLTITNPTSADTGMYVCEA 346
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 12/208 (5%)
Query: 397 TVQVPLE-APSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIR 453
T+Q P + AP++ T ++ + W P+ G+ GY+V+ W ++
Sbjct: 1150 TLQAPPDVAPTSLT-VRTASETSLRLRWVPLPDSQYNGNPESVGYRVKYWRSDQPSSALA 1208
Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEA 512
+++ ++ E T +++ ++ R+ AFN GP SE++ T E VP +++ A
Sbjct: 1209 QVVSDRLERELT-IEELEEWTEYELRMQAFNAIGAGPWSELVRGRTRESVPSAAPENVSA 1267
Query: 513 IPLGSSAFYLKWVK-PEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLA 570
+ S+ L W PEQ NG+++GYK+ Y K P R + T SA LA
Sbjct: 1268 EAVSSTQILLTWASVPEQDQNGLILGYKVLY-CAKDLDPEP---RSHVVRGNHTQSALLA 1323
Query: 571 GLEPSTKYRIHLAGYTKAGDGAESKYLF 598
GL Y + + +T+ G+G S L
Sbjct: 1324 GLRKFVVYELQVLAFTRIGNGVPSSPLI 1351
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
VP AP N + + + + + +++W V Q G GYKV + KD + R +V
Sbjct: 1257 VPSAAPENVS-AEAVSSTQILLTWASVPEQDQNGLILGYKV-LYCAKDLDPEPRSHVVRG 1314
Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNG-PPSEIISFVTPEGVPGTVQSLEAIPLGSS 518
+ + + +VLAF NG P S +I T + PG L + +
Sbjct: 1315 NHTQSALLAGLRKFVVYELQVLAFTRIGNGVPSSPLILERTKDDTPGPPVRLVFPEVRLT 1374
Query: 519 AFYLKWVKPEQPNGVLMGYKIKYQSVKGT-------KVGPLLERLPYISDPTTTSAKLAG 571
A + W PE+PNGV++GY+I Y+ G+ +VG + + T+ +LA
Sbjct: 1375 AVRIVWQPPEEPNGVILGYQIAYRLASGSPHTFTTVEVGATVRQF--------TATELA- 1425
Query: 572 LEPSTKYRIHLAGYTKAGDG 591
P + Y L+ T+ G G
Sbjct: 1426 --PESAYIFRLSAKTRQGWG 1443
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 33/234 (14%)
Query: 388 DF-IEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE 445
DF E +A T+Q VP E P + + + ++ W P +SL G +GY++ + E
Sbjct: 1545 DFSAETEAVTTLQDVPGEPPGSVSATPHTTSS-VLIQWQPPRDESLNGLLQGYRIY-YRE 1602
Query: 446 KDGE-------GSIRELIVNKGESTTTEVDKFVPAS-----------KNFARVLAFNGAY 487
+ E +++ + E T K V +S K + R AY
Sbjct: 1603 LESETGMSPEPKTLKSPSALRAELTAQSSFKTVNSSSSLTTYELTHLKKYRRYEVIMTAY 1662
Query: 488 N----GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIK 540
N P S + E P Q+++ PL +S + W PE NG + GYK+
Sbjct: 1663 NIIGESPASVPVEVFVGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKVY 1722
Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
Y ++ L ++ +P K+ L TKY I ++ + AGDG +S
Sbjct: 1723 YWEADSRNETEKMKVL-FLPEPV---VKIKDLTSHTKYLISISAFNAAGDGPKS 1772
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 64/167 (38%), Gaps = 10/167 (5%)
Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
TE + ++G +VLTC G+ E WI N ELT T I + D
Sbjct: 90 TEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWIRNDSELT----TYSSEYKYIIPSLQKLD 145
Query: 282 SGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR-CNAVSDPSLKL 339
+G Y C RN++G Q + V + D + V G +A VS P +
Sbjct: 146 AGFYRCVVRNRMGALLQRKSEIQVAYMGNFMDTDQRKTVSQGHAALLNLLPIVSCP--QP 203
Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
+ W R I S N + T +S D+G Y +A E
Sbjct: 204 QVTWFREGHKIIPSSRIAITLENQLVILATTAS--DAGAYYVQAVNE 248
Score = 37.0 bits (84), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 86/208 (41%), Gaps = 27/208 (12%)
Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPS-EIISFVTPEGVPGTVQ-SLEAIPLGSS 518
E+T V++ P + R+ A N + S E + T + VPG S+ A P +S
Sbjct: 1516 EATACAVERLRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPGSVSATPHTTS 1575
Query: 519 AFYLKWVKP--EQPNGVLMGYKIKYQSVK---GTKVGPLLERLPYI-------------- 559
+ ++W P E NG+L GY+I Y+ ++ G P + P
Sbjct: 1576 SVLIQWQPPRDESLNGLLQGYRIYYRELESETGMSPEPKTLKSPSALRAELTAQSSFKTV 1635
Query: 560 -SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL-FYV----PFKNPDNVEGRGS 613
S + T+ +L L+ +Y + + Y G+ S + +V P P NV+
Sbjct: 1636 NSSSSLTTYELTHLKKYRRYEVIMTAYNIIGESPASVPVEVFVGEAAPAMAPQNVQVTPL 1695
Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIFW 641
T + L ++W P N Y++++
Sbjct: 1696 TASQLEVTWDPPPPESQNGNIQGYKVYY 1723
>sp|Q810U4|NRCAM_MOUSE Neuronal cell adhesion molecule OS=Mus musculus GN=Nrcam PE=1 SV=2
Length = 1256
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 164/523 (31%), Positives = 241/523 (46%), Gaps = 36/523 (6%)
Query: 46 LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
LR + L CI G P P W K DG + P++R N+ K+L I HV +D G+Y C
Sbjct: 277 LRGNVLSLECIAEGLPTPIIYWIKEDG--MLPANRTFYRNFKKTLQITHVSEADSGNYQC 334
Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
N +G A ++I ++V AAPY+ V P+ + + E T C+A+G P+P I W+ NG
Sbjct: 335 IAKNALG-AVHHTISVTVKAAPYWIVAPQNLVLSPGENGTLICRANGNPKPRISWLTNGV 393
Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
PI A +P RK+ + I N+++S + Y CNA+N GY+ + +VNVLA P I +
Sbjct: 394 PIEIALDDPSRKIDGDTIIFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILTS 453
Query: 225 PKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFAD 281
Y V + +L C FG+P P + W K L Y + + G L+I
Sbjct: 454 ANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALHEDIYVLHDNGTLEIPVAQKDS 513
Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
+G YTC ARNKLG A+ L +K+ T I QPE V+ G +F C D +L +I
Sbjct: 514 TGTYTCVARNKLGMAKNEVHLEIKDPTRIIKQPEYAVVQRGSKVSFECRVKHDHTLIPTI 573
Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
+WL+ + + ++ RF D+ L V+ + D G YTC A T LD A A L V P
Sbjct: 574 MWLKDNG--ELPNDERFSTDKDH-LVVSDVKDDDGGTYTCTANTTLDSASASAVLRVVAP 630
Query: 402 LEAPS----------NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGS 451
P+ + L +D K ++W P + + ++ G
Sbjct: 631 TPTPAPIYDVPNPPFDLELTNQLD-KSVQLTWTPGDDNN--SPITKFIIEYEDAMHDAGL 687
Query: 452 IRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPGT 506
R G TT ++ K P RV+A N PSE + P+ P
Sbjct: 688 WRHQAEVSGTQTTAQL-KLSPYVNYSFRVMAENSIGRSMPSEASEQYLTKAAEPDQNPMA 746
Query: 507 VQSLEAIPLGSSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
V+ L P + W KP Q NG + YK+ ++ G
Sbjct: 747 VEGLGTEP---DNLVITW-KPLNGFQSNGPGLQYKVSWRQKDG 785
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 141/564 (25%), Positives = 230/564 (40%), Gaps = 58/564 (10%)
Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSDTGNYGCNA 199
++ EC A GLP P I+W+ K P N R N + I ++ ++D+GNY C A
Sbjct: 282 LSLECIAEGLPTPIIYWI---KEDGMLPAN--RTFYRNFKKTLQITHVSEADSGNYQCIA 336
Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK-- 257
N+LG V+ + V V A AP AP++ G+ L CR G PKP ++W+ N
Sbjct: 337 KNALGAVHHTISVTVKA-APYWIVAPQNLVLSPGENGTLICRANGNPKPRISWLTNGVPI 395
Query: 258 ELTGGRYTILETGDLKI-TDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQP 314
E+ + GD I ++V + S Y C A NK G + + V +T
Sbjct: 396 EIALDDPSRKIDGDTIIFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILTSAN 455
Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
Y+V A + A C P +I W +G++ E +V ++ +L + + +
Sbjct: 456 TLYQVIANRPALLDCAFFGSP--MPTIEWFKGTKGSALH-EDIYVLHDNGTLEIPVAQKD 512
Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
+G YTC A+ +L + + L ++ P + + AVV R
Sbjct: 513 STGTYTCVARNKLGMAKNEVHLEIKDPTRI--------IKQPEYAVVQRGSKVSFECRVK 564
Query: 435 FRGYKVQT--WTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN---- 488
+ T W + +GE + E +T+ D V + + N
Sbjct: 565 HDHTLIPTIMWLKDNGE-------LPNDERFSTDKDHLVVSDVKDDDGGTYTCTANTTLD 617
Query: 489 -GPPSEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIK 540
S ++ V P P + + P + L W + N + + I+
Sbjct: 618 SASASAVLRVVAPTPTPAPIYDVPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIE 677
Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKY 596
Y+ L +S T T+A+L L P Y + G A +Y
Sbjct: 678 YED--AMHDAGLWRHQAEVSG-TQTTAQLK-LSPYVNYSFRVMAENSIGRSMPSEASEQY 733
Query: 597 LFYV--PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
L P +NP VEG G+ P+NLVI+W + + N P +Y++ WR+ + + W
Sbjct: 734 LTKAAEPDQNPMAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTS-- 791
Query: 655 VLDWRQSELVLANQPTFQPYEIKV 678
V+ S+ +++ PTF PY IKV
Sbjct: 792 VVVANVSKYIVSGTPTFVPYLIKV 815
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 97/201 (48%), Gaps = 12/201 (5%)
Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
+P+ AP N + V+++ A V W+PV P+S+RGH +GY++ W + R I K
Sbjct: 838 LPMVAPGNVR-VSVVNSTLAEVHWDPVPPKSVRGHLQGYRIYYWKTQSSSKRNRRHIEKK 896
Query: 460 -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
G T + P S V NG GP S F TPEGVP SL+ +
Sbjct: 897 ILTFQGTKTHGMLPGLQPYSHYALNVRVVNGKGEGPASTDRGFHTPEGVPSAPSSLKIVN 956
Query: 515 LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
+ L+W P PNG+L Y ++YQ + T ++GPL++ ++P T L L
Sbjct: 957 PTLDSLTLEWDPPSHPNGILTEYILQYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 1012
Query: 573 EPSTKYRIHLAGYTKAGDGAE 593
ST+Y+ + T G G++
Sbjct: 1013 NFSTRYKFYFYAQTSVGPGSQ 1033
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 140/607 (23%), Positives = 222/607 (36%), Gaps = 65/607 (10%)
Query: 53 LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
L C G P P+ W +GVPI +PS +I G ++I +V+ S Y C S
Sbjct: 374 LICRANGNPKPRISWLTNGVPIEIALDDPSRKID----GDTIIFSNVQESSSAVYQCNAS 429
Query: 108 NGVGEAKSYSIDLSVLAAP--YFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
N G + + ++VLA P T +C G P P I W G
Sbjct: 430 NKYGYLLANAF-VNVLAEPPRILTSANTLYQVIANRPALLDCAFFGSPMPTIEWF-KGTK 487
Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
S + + I +K TG Y C A N LG +V++ + I + P
Sbjct: 488 GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQP 546
Query: 226 KDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRYTILETGDLKITDVAFADSG 283
+ G V CRV P + W+ + EL + L ++DV D G
Sbjct: 547 EYAVVQRGSKVSFECRVKHDHTLIPTIMWLKDNGELPNDERFSTDKDHLVVSDVKDDDGG 606
Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVW 343
YTC A L +A S L V + P + + F + + + W
Sbjct: 607 TYTCTANTTLDSASASAVLRV-----VAPTPTPAPIYDVPNPPFDLELTNQLDKSVQLTW 661
Query: 344 LRGSE---PID---FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF-IEAQATL 396
G + PI E E + + S + Q F + A+ ++
Sbjct: 662 TPGDDNNSPITKFIIEYEDAMHDAGLWRHQAEVSGTQTTAQLKLSPYVNYSFRVMAENSI 721
Query: 397 TVQVPLEAPSNFTLIQV-------------IDAKKAVVSWNPVSPQSLRGHFRGYKVQTW 443
+P EA + + V++W P++ G YKV +W
Sbjct: 722 GRSMPSEASEQYLTKAAEPDQNPMAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKV-SW 780
Query: 444 TEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFV--- 498
+KDG+ ++V N + + FVP +V A N P P+ ++
Sbjct: 781 RQKDGDDEWTSVVVANVSKYIVSGTPTFVPY---LIKVQALNDVGFAPEPAAVMGHSGED 837
Query: 499 TPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLE 554
P PG V+ + S+ + W V P+ G L GY+I Y + + + +E
Sbjct: 838 LPMVAPGNVR---VSVVNSTLAEVHWDPVPPKSVRGHLQGYRIYYWKTQSSSKRNRRHIE 894
Query: 555 RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYVPFKNPDNVEGRGS 613
+ T T L GL+P + Y +++ G+G A + F+ P EG S
Sbjct: 895 KKILTFQGTKTHGMLPGLQPYSHYALNVRVVNGKGEGPASTDRGFHTP-------EGVPS 947
Query: 614 TPNNLVI 620
P++L I
Sbjct: 948 APSSLKI 954
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 128/344 (37%), Gaps = 57/344 (16%)
Query: 120 LSVLAAPYFTVEPEFINAAE--------EETVTFECKASGLPEPEIHWVHNGKPIS-QAP 170
+S L P V+P I E + +C+A G P P W NG
Sbjct: 27 ISALDVPLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKD 86
Query: 171 PNPRRKVGPNRITIENLR--KSDT--GNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
P K G + I + K++T G Y C A N G + V + +P T+
Sbjct: 87 PLVTMKPGSGTLVINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKERL 146
Query: 227 DEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN--QKELTGGRYTILETGDLKITDVAFADS 282
+ + +G+++VL CR G P + W+ N Q+ R + GDL ++V D+
Sbjct: 147 EPIVLQNGQSLVLPCRPPIGLPPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDT 206
Query: 283 GE-YTCFAR----------------------------NKLGTAQGSGSLTVKEHTHITDQ 313
E Y C+AR L + G+ + KE
Sbjct: 207 REDYICYARFNHTQTIQQKQPISLKVISVDELNDTIAANLSDTEFYGAKSSKERPPTFLT 266
Query: 314 PEDYEVEA----GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVT 369
PE E G + C A P+ I W++ E + F ++ +L +T
Sbjct: 267 PEGNESHKEELRGNVLSLECIAEGLPT--PIIYWIK--EDGMLPANRTFYRNFKKTLQIT 322
Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
SE DSG Y C A+ L + ++TV+ + AP N L
Sbjct: 323 HVSEADSGNYQCIAKNALGAVHHTISVTVKAAPYWIVAPQNLVL 366
>sp|Q7Z5N4|SDK1_HUMAN Protein sidekick-1 OS=Homo sapiens GN=SDK1 PE=1 SV=3
Length = 2213
Score = 219 bits (558), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 189/625 (30%), Positives = 276/625 (44%), Gaps = 44/625 (7%)
Query: 42 KEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVEFS 97
+ V + + L CI P+ W ++GV RI+ G ++G+ L I + +
Sbjct: 302 RSVVAGSSETTLECIASARPVEDLSVTWKRNGV------RITSGLHSFGRRLTISNPTSA 355
Query: 98 DQGSYTCEVS--NGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLPE 154
D G Y CE + E + L ++ PYFT EPE I+A EETV C+A G+P
Sbjct: 356 DTGPYVCEAALPGSAFEPARATAFLFIIEPPYFTAEPESRISAEVEETVDIGCQAMGVPL 415
Query: 155 PEIHWVHNGKPISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
P + W + IS+ NPR KV + I+ LR D+G + C A+N G + Y++
Sbjct: 416 PTLQWYKDAISISRLQ-NPRYKVLASGGLRIQKLRPEDSGIFQCFASNEGGEIQTHTYLD 474
Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
V AP T+ P D DG T +L C V GAPKP + W L G R+ +LE
Sbjct: 475 VTNIAPVFTQRPVDTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLE 534
Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
+G L+I V D+G YTC+A N G+ S +LTV T I PED+ V G +AT
Sbjct: 535 SGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNRTSIVHPPEDHVVIKGTTATLH 594
Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
C A DP + L VW + + + S R V D SL ++++ D G Y+C +E
Sbjct: 595 CGATHDPRVSLRYVWKKDNVALTPSSTSRIVVEKDGSLLISQTWSGDIGDYSCEIVSEGG 654
Query: 389 FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV-SWNPVSPQSLRGHFRGYKVQTWTEKD 447
A L V +P N + AVV SW V P Y V+ +E +
Sbjct: 655 NDSRMARLEVIELPHSPQNLLVSPNSSHSHAVVLSW--VRPFDGNSPILYYIVEL-SENN 711
Query: 448 GEGSIRELIVNKG-ESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEG 502
+ + N G E T V PA RV A N G Y+ S ++ P
Sbjct: 712 SPWKVH--LSNVGPEMTGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPS 769
Query: 503 VPGTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYIS 560
P +++ A + + ++W P + NGVL GY ++Y+ + G G +R I+
Sbjct: 770 APP--KNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYR-LAGLP-GEYQQR--NIT 823
Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY-----LFYVPFKNPDNVEGRGSTP 615
P + L T+Y I +A Y AG G S+ L VP P NV+
Sbjct: 824 SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNS 883
Query: 616 NNLVISWTAMPEIEHNAPHFKYRIF 640
+ W P+ N + Y++
Sbjct: 884 TTIQFLWNPPPQQFINGINQGYKLL 908
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 176/679 (25%), Positives = 265/679 (39%), Gaps = 113/679 (16%)
Query: 61 PLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN-GVGEAK-SYSI 118
P PQ W ++G I PS+RI+ L+I SD G+Y + N GE K S I
Sbjct: 219 PRPQVTWFREGHKIIPSNRIAI-TLENQLVILATTTSDAGAYYVQAVNEKNGENKTSPFI 277
Query: 119 DLSV--------LAAPYFTVEP--EFINAAEEETVTFECKASGLP--EPEIHWVHNGKPI 166
LS+ AP V P + A ET T EC AS P + + W NG I
Sbjct: 278 HLSIARDVGTPETMAPTIVVPPGNRSVVAGSSET-TLECIASARPVEDLSVTWKRNGVRI 336
Query: 167 SQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV---LAHAPEITE 223
+ + R R+TI N +DTG Y C A G ++ + P T
Sbjct: 337 TSGLHSFGR-----RLTISNPTSADTGPYVCEAALP-GSAFEPARATAFLFIIEPPYFTA 390
Query: 224 APKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ---KELTGGRYTILETGDLKITDVAF 279
P+ + + +TV + C+ G P P + W + L RY +L +G L+I +
Sbjct: 391 EPESRISAEVEETVDIGCQAMGVPLPTLQWYKDAISISRLQNPRYKVLASGGLRIQKLRP 450
Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHI-TDQPEDYEVEAGQSATFRCNAVSDPSLK 338
DSG + CFA N+ G Q L V + T +P D V G +A RC P K
Sbjct: 451 EDSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRPVDTTVTDGMTAILRCEVSGAP--K 508
Query: 339 LSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
+I W R + + S PRF+ L + D+G YTC A + A ATL
Sbjct: 509 PAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATL 568
Query: 397 TV---QVPLEAPSNFTLIQVIDA------------------KKAVVSWNPVSPQSLRGHF 435
TV + P + +I+ A KK V+ P S +
Sbjct: 569 TVWNRTSIVHPPEDHVVIKGTTATLHCGATHDPRVSLRYVWKKDNVALTPSSTSRIVVEK 628
Query: 436 RGYKV--QTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 493
G + QTW+ G+ S IV++G + + AR+ E
Sbjct: 629 DGSLLISQTWSGDIGDYSCE--IVSEGGNDS-----------RMARL------------E 663
Query: 494 IISFVTPEGVPGTVQSLEAIPLG--SSAFYLKWVKPEQPNGVLMGYKIKYQ------SVK 545
+I P + Q+L P S A L WV+P N ++ Y ++ V
Sbjct: 664 VIEL------PHSPQNLLVSPNSSHSHAVVLSWVRPFDGNSPILYYIVELSENNSPWKVH 717
Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG---AESKYLFY--- 599
+ VGP + T ++GL P+ Y+ + + G G AE+ L
Sbjct: 718 LSNVGPEM-----------TGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEE 766
Query: 600 VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
P P N+ G T ++++ W PE EHN Y + +R + Q ++
Sbjct: 767 PPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNITSPE 826
Query: 660 QSELVLANQPTFQPYEIKV 678
+ ++ + + YEI+V
Sbjct: 827 VNYCLVTDLIIWTQYEIQV 845
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 101/240 (42%), Gaps = 23/240 (9%)
Query: 389 FIEAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
F A T+Q VP P N + +++ WNP Q + G +GYK+ W
Sbjct: 856 FSRAVTEYTLQGVPTAPPQNVQ-TEAVNSTTIQFLWNPPPQQFINGINQGYKLLAWPADA 914
Query: 448 GEGSIRELI------VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 501
E I V+ G T + KF + F VL F +GPPS T E
Sbjct: 915 PEAVTVVTIAPDFHGVHHGH--ITNLKKF---TAYFTSVLCFTTPGDGPPSTPQLVWTQE 969
Query: 502 GVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD 561
PG V L + ++ + W +P + NG++ GY+I ++ V G RL + +
Sbjct: 970 DKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQISWE-VYGRND----SRLTHTLN 1024
Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVIS 621
TT K+ GL T Y I +A T G G + + P ++ G P+NLVIS
Sbjct: 1025 STTHEYKIQGLSSLTTYTIDVAAVTAVGTGLVTSST--ISSGVPPDLPG---APSNLVIS 1079
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 2/142 (1%)
Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
P AP N + + A + V+W+P P+S G+ +GYK+ W E D + ++ V
Sbjct: 1701 PAMAPQNVQ-VTPLTASQLEVTWDPPPPESQNGNIQGYKIYYW-EADSQNETEKMKVLFL 1758
Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
+ +K + AFN A +GP S+ T + PG L + S+
Sbjct: 1759 PEPVVRLKNLTSHTKYLVSISAFNAAGDGPKSDPQQGRTHQAAPGAPSFLAFSEITSTTL 1818
Query: 521 YLKWVKPEQPNGVLMGYKIKYQ 542
+ W +P NG+L GY++ Y+
Sbjct: 1819 NVSWGEPAAANGILQGYRVVYE 1840
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 100/275 (36%), Gaps = 29/275 (10%)
Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
APYF EP E + C A G E W+ + ++ +
Sbjct: 103 APYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMRDDSELTTYSSE-------YKYI 155
Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCR-V 242
I +L+K D G Y C N +G + + +A+ + + + G+ +L +
Sbjct: 156 IPSLQKLDAGFYRCVVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVSQGRAAILNLLPI 215
Query: 243 FGAPKPEVNWIH-NQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNK--------- 292
P+P+V W K + R I L I +D+G Y A N+
Sbjct: 216 TSYPRPQVTWFREGHKIIPSNRIAITLENQLVILATTTSDAGAYYVQAVNEKNGENKTSP 275
Query: 293 ---LGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSE 348
L A+ G+ T I P + V AG S T C A + P LS+ W R
Sbjct: 276 FIHLSIARDVGTPETMAPT-IVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGV 334
Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
I + S LT++ + D+G Y C A
Sbjct: 335 RIT-----SGLHSFGRRLTISNPTSADTGPYVCEA 364
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 10/207 (4%)
Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIRE 454
T+Q P + ++ + W P+ G+ GY+++ W ++ +
Sbjct: 1168 TLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRSDLQSSAVAQ 1227
Query: 455 LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEAI 513
++ ++ E T +++ + ++ AFN GP SE++ T E VP +++ A
Sbjct: 1228 VVSDRLEREFT-IEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRESVPSAAPENVSAE 1286
Query: 514 PLGSSAFYLKWVK-PEQ-PNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAG 571
+ S+ L W PEQ NG+++GYKI +++ K P R + T SA LAG
Sbjct: 1287 AVSSTQILLTWTSVPEQDQNGLILGYKILFRA-KDLDPEP---RSHIVRGNHTQSALLAG 1342
Query: 572 LEPSTKYRIHLAGYTKAGDGAESKYLF 598
L Y + + +T+ G+G S L
Sbjct: 1343 LRKFVLYELQVLAFTRIGNGVPSTPLI 1369
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
VP AP N + + + + + +++W V Q G GYK+ + KD + R IV
Sbjct: 1275 VPSAAPENVS-AEAVSSTQILLTWTSVPEQDQNGLILGYKI-LFRAKDLDPEPRSHIVRG 1332
Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-IISFVTPEGVPGTVQSLEAIPLGSS 518
+ + + +VLAF NG PS +I T + PG L + +
Sbjct: 1333 NHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLT 1392
Query: 519 AFYLKWVKPEQPNGVLMGYKIKYQ 542
+ + W PE+PNG+++GY+I Y+
Sbjct: 1393 SVRIVWQPPEEPNGIILGYQIAYR 1416
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 30/229 (13%)
Query: 391 EAQATLTVQ-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV--QTWTEKD 447
E +A T+Q VP E P + + + ++ W P +SL G +GY++ + +
Sbjct: 1567 ETEAVTTLQDVPGEPPGSVSATPHTTSS-VLIQWQPPRDESLNGLLQGYRIYYRELEYEA 1625
Query: 448 GEGS----IRELIVNKGESTTTEVDKFVPAS-----------KNFARVLAFNGAYN---- 488
G G+ ++ I E T K V +S K + R AYN
Sbjct: 1626 GSGTEAKTLKNPIALHAELTAQSSFKTVNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGE 1685
Query: 489 GPPSEIISFVTPEGVPGTV-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
P S + E P Q+++ PL +S + W PE NG + GYKI Y
Sbjct: 1686 SPASAPVEVFVGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEAD 1745
Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
++ L ++ +P +L L TKY + ++ + AGDG +S
Sbjct: 1746 SQNETEKMKVL-FLPEPV---VRLKNLTSHTKYLVSISAFNAAGDGPKS 1790
Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 103/257 (40%), Gaps = 27/257 (10%)
Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFVTPEGVPGTVQ-SLEAIPLGSS 518
E+T VD+ P + R+ A N + SE + T + VPG S+ A P +S
Sbjct: 1534 EATACVVDRLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTS 1593
Query: 519 AFYLKWVKP--EQPNGVLMGYKIKYQSVK-----GTKVGPLLERLPYI------------ 559
+ ++W P E NG+L GY+I Y+ ++ GT+ L +
Sbjct: 1594 SVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKNPIALHAELTAQSSFKTV 1653
Query: 560 -SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG-AESKYLFYV----PFKNPDNVEGRGS 613
S T+T +L L+ +Y + + Y G+ A + +V P P NV+
Sbjct: 1654 NSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTPL 1713
Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQP 673
T + L ++W P N Y+I++ ++ + VL + + L N +
Sbjct: 1714 TASQLEVTWDPPPPESQNGNIQGYKIYYWEADSQNETEKMKVLFLPEPVVRLKNLTSHTK 1773
Query: 674 YEIKVVQTWTEKDGEGS 690
Y + + DG S
Sbjct: 1774 YLVSISAFNAAGDGPKS 1790
Score = 40.4 bits (93), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 63/166 (37%), Gaps = 8/166 (4%)
Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVAFAD 281
TE + ++G +VLTC G+ E W+ + ELT T I + D
Sbjct: 108 TEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMRDDSELT----TYSSEYKYIIPSLQKLD 163
Query: 282 SGEYTCFARNKLGT-AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
+G Y C RN++G Q + V D + V G++A ++ +
Sbjct: 164 AGFYRCVVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVSQGRAAILNLLPITS-YPRPQ 222
Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
+ W R I + N + T +S D+G Y +A E
Sbjct: 223 VTWFREGHKIIPSNRIAITLENQLVILATTTS--DAGAYYVQAVNE 266
Score = 37.4 bits (85), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 17/173 (9%)
Query: 518 SAFYLKWVK-PE-QPNG--VLMGYKIKY--QSVKGTKVGPLLERLPYISDPTTTSAKLAG 571
++ L+WV P+ Q NG +GY+IKY ++ + V + +SD +
Sbjct: 1188 TSLRLRWVPLPDSQYNGNPESVGYRIKYWRSDLQSSAVAQV------VSDRLEREFTIEE 1241
Query: 572 LEPSTKYRIHLAGYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMP 626
LE +Y + + + G G S+ + VP P+NV + ++++WT++P
Sbjct: 1242 LEEWMEYELQMQAFNAVGAGPWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWTSVP 1301
Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVV 679
E + N Y+I +R + V +LA F YE++V+
Sbjct: 1302 EQDQNGLILGYKILFRAKDLDPEPRSHIVRGNHTQSALLAGLRKFVLYELQVL 1354
>sp|Q8AV57|SDK2_CHICK Protein sidekick-2 OS=Gallus gallus GN=SDK2 PE=2 SV=2
Length = 2177
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 178/603 (29%), Positives = 266/603 (44%), Gaps = 32/603 (5%)
Query: 40 RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
R V +V + C+ PL + IW KDGVPI S IS +Y + L I +
Sbjct: 227 RNTSVVAGTSEVTMECVANARPLIKLHIIWKKDGVPI--SSGIS--DYSRRLTILNPTLG 282
Query: 98 DQGSYTCE--VSNGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPE 154
D G Y CE + + A + LSVL P F EPE I A E+ V C+A G+P
Sbjct: 283 DSGYYECEAVLRSSSVPAVAEGAYLSVLEPPQFVKEPERHITAEMEKVVAIPCQAKGVPP 342
Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
P++ W + I + + + + I L DTG + C A N+ G V Y+ V
Sbjct: 343 PDMAWYKDASLIHPEQLSRFQLLADGSLQISGLLPDDTGMFQCFARNAAGEVQTTTYLAV 402
Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILET 269
+ AP IT P+D +DG +V+L C GAP+P + W ++ L G R+T+LE+
Sbjct: 403 TSIAPNITRGPQDSTVIDGMSVILNCETSGAPRPAITWQKGERILASGSVQLPRFTLLES 462
Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
G L ++ D+G YTC A N G + S L V T ITD P+D V G A+ C
Sbjct: 463 GSLLVSPAHLTDAGTYTCLATNSRGVDEASADLVVWARTRITDPPQDQSVIKGTKASMSC 522
Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
DPS+ + +W + P+ ES PR +L ++++ D G YTC+ +
Sbjct: 523 GVTHDPSVDVRYIWEKDGAPLGTESGPRLRLDETGTLHISQTWSGDIGTYTCKVLSAGGN 582
Query: 390 IEAQATLTV-QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
A L V Q+P S ++ ++ + ++W P Y V+ +E +
Sbjct: 583 DSRSAHLRVRQLPHAPESPVAVLSPLEKRAINLTW--AKPFDGNSPLLRYLVEI-SENNA 639
Query: 449 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT-PEGVP-GT 506
++ V+ E T V VPA R+ A N S+ V+ PE P
Sbjct: 640 PWTVLLASVDP-ELTWVVVRGLVPARSYQFRLCAVNDVGRSQFSKDTERVSLPEEPPFAP 698
Query: 507 VQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT 564
Q++ A + + ++W P + NGVL GY I+Y + G VG + I++
Sbjct: 699 PQNVIASGRTNQSIMIQWQPPPESHQNGVLKGYIIRY-CLAGLPVG---YQFKNITNADV 754
Query: 565 TSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLV 619
+ L L T Y I +A Y AG G S L VP P NV+ + +
Sbjct: 755 NNLLLEDLIIWTNYEIEVAAYNSAGLGVYSMKVTEWTLQGVPTVPPGNVQTEATNSTTIR 814
Query: 620 ISW 622
+W
Sbjct: 815 FTW 817
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 182/680 (26%), Positives = 270/680 (39%), Gaps = 69/680 (10%)
Query: 35 QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV 94
QQ V+ + +R ++ F P PQ W +DG I+PS RI+ +L+I
Sbjct: 126 QQSVSHGEAAVIRAPRIASF------PQPQVTWFRDGRKISPSSRIAI-TLENTLVILST 178
Query: 95 EFSDQGSYTCE-VSNGVGEAK-SYSIDLSVL--------AAPYFTVEPEFIN-AAEEETV 143
D G Y + V++ G+ K S I L+V AP V P + A V
Sbjct: 179 VAPDAGRYYVQAVNDKNGDNKTSQPITLTVANVGGPADPIAPTIIVPPRNTSVVAGTSEV 238
Query: 144 TFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA-- 199
T EC A+ P ++H W +G PIS + R R+TI N D+G Y C A
Sbjct: 239 TMECVANARPLIKLHIIWKKDGVPISSGISDYSR-----RLTILNPTLGDSGYYECEAVL 293
Query: 200 -TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDG-KTVVLTCRVFGAPKPEVNW----- 252
++S+ V + Y++VL P+ + P+ T + K V + C+ G P P++ W
Sbjct: 294 RSSSVPAVAEGAYLSVL-EPPQFVKEPERHITAEMEKVVAIPCQAKGVPPPDMAWYKDAS 352
Query: 253 -IHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHI 310
IH ++ R+ +L G L+I+ + D+G + CFARN G Q + L V +I
Sbjct: 353 LIHPEQL---SRFQLLADGSLQISGLLPDDTGMFQCFARNAAGEVQTTTYLAVTSIAPNI 409
Query: 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTV 368
T P+D V G S C P + +I W +G + S PRF SL V
Sbjct: 410 TRGPQDSTVIDGMSVILNCETSGAP--RPAITWQKGERILASGSVQLPRFTLLESGSLLV 467
Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
+ + D+G YTC A EA A L V VI KA +S
Sbjct: 468 SPAHLTDAGTYTCLATNSRGVDEASADLVVWARTRITDPPQDQSVIKGTKASMSCGVT-- 525
Query: 429 QSLRGHFRGYKVQTWTEKDGE--GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
H V+ EKDG G+ + E+ T + + +
Sbjct: 526 -----HDPSVDVRYIWEKDGAPLGTESGPRLRLDETGTLHISQTWSGDIGTYTCKVLSAG 580
Query: 487 YNGPPSEIISFVTPEGVPGTVQSLEAI--PLGSSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
N S + +P +S A+ PL A L W KP N L+ Y ++ S
Sbjct: 581 GNDSRSAHLRV---RQLPHAPESPVAVLSPLEKRAINLTWAKPFDGNSPLLRYLVEI-SE 636
Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
LL + DP T + GL P+ Y+ L G SK V
Sbjct: 637 NNAPWTVLLASV----DPELTWVVVRGLVPARSYQFRLCAVNDVGRSQFSKDTERVSLPE 692
Query: 601 --PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDW 658
PF P NV G T +++I W PE N Y I + + ++ +
Sbjct: 693 EPPFAPPQNVIASGRTNQSIMIQWQPPPESHQNGVLKGYIIRYCLAGLPVGYQFKNITNA 752
Query: 659 RQSELVLANQPTFQPYEIKV 678
+ L+L + + YEI+V
Sbjct: 753 DVNNLLLEDLIIWTNYEIEV 772
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 138/587 (23%), Positives = 229/587 (39%), Gaps = 68/587 (11%)
Query: 51 VELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY----GKSLIIKHVEFSDQGSYTCEV 106
V L C G P P W K G I S + + SL++ +D G+YTC
Sbjct: 424 VILNCETSGAPRPAITWQK-GERILASGSVQLPRFTLLESGSLLVSPAHLTDAGTYTCLA 482
Query: 107 SN--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--WVHN 162
+N GV EA S DL V A T P+ + + + C + P ++ W +
Sbjct: 483 TNSRGVDEA---SADLVVWARTRITDPPQDQSVIKGTKASMSCGVTHDPSVDVRYIWEKD 539
Query: 163 GKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV--LAHAP 219
G P+ PR ++ + I D G Y C ++ G + ++ V L HAP
Sbjct: 540 GAPLGTES-GPRLRLDETGTLHISQTWSGDIGTYTCKVLSAGGNDSRSAHLRVRQLPHAP 598
Query: 220 EITEAPKDEYTVDGKTVVLT-CRVFGAPKPEVNWIHNQKELTGGRYTILETGDLKITDVA 278
E A ++ + + LT + F P + ++ E +L + D ++T V
Sbjct: 599 ESPVAVLSP--LEKRAINLTWAKPFDGNSPLLRYLVEISENNAPWTVLLASVDPELTWVV 656
Query: 279 F-----ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS--ATFRCN- 330
A S ++ A N +G +Q S + T PE+ Q+ A+ R N
Sbjct: 657 VRGLVPARSYQFRLCAVNDVGRSQFS------KDTERVSLPEEPPFAPPQNVIASGRTNQ 710
Query: 331 -----------AVSDPSLKLSIV-WLRGSEPIDFESEPRFVQSNDYS------LTVTKSS 372
+ + LK I+ + P+ ++ + + + D + L + +
Sbjct: 711 SIMIQWQPPPESHQNGVLKGYIIRYCLAGLPVGYQF--KNITNADVNNLLLEDLIIWTNY 768
Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
E++ Y + TL VP P N + ++ +WNP SPQ +
Sbjct: 769 EIEVAAYNSAGLGVYSMKVTEWTLQ-GVPTVPPGNVQ-TEATNSTTIRFTWNPPSPQFIN 826
Query: 433 GHFRGYKVQTWT-EKDGEGSIRELIVNKGEST----TTEVDKFVPASKNFARVLAFNGAY 487
G +GYK+ W E + E ++ + N +S + KF ++ VL F
Sbjct: 827 GINQGYKLIAWEPEHEEEATVVTVRPNFQDSVHVGYVVGLKKF---TEYLTSVLCFTTPG 883
Query: 488 NGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT 547
+GP S T E VPG V L + ++ + W +P + NG+L GY+I ++ T
Sbjct: 884 DGPRSPPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPLEKNGILTGYRISWEEYNRT 943
Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
R+ + T ++ GL T Y I +A T G G S
Sbjct: 944 NT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 985
Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 115/298 (38%), Gaps = 31/298 (10%)
Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
+PYF EP E + C A G E W+HN + +++ R
Sbjct: 30 SPYFKTEPVRSQVHLEGNRLVLTCMAEGSWPLEFKWLHNSRELTKFSLE-------YRYM 82
Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RV 242
I +L ++ G Y C N +G + + +A+ ++ + G+ V+ R+
Sbjct: 83 ITSLDRTHAGFYRCIVRNRMGALLQRQTEVQVAYMGSFEDSETQQSVSHGEAAVIRAPRI 142
Query: 243 FGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSG 300
P+P+V W + ++++ R I L I D+G Y A N K G + S
Sbjct: 143 ASFPQPQVTWFRDGRKISPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQ 202
Query: 301 SLTVKEHT----------HITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEP 349
+T+ I P + V AG S T C A + P +KL I+W + P
Sbjct: 203 PITLTVANVGGPADPIAPTIIVPPRNTSVVAGTSEVTMECVANARPLIKLHIIWKKDGVP 262
Query: 350 IDFESEPRFVQSNDYS--LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAP 405
I +DYS LT+ + DSG Y C A + A A LE P
Sbjct: 263 IS-------SGISDYSRRLTILNPTLGDSGYYECEAVLRSSSVPAVAEGAYLSVLEPP 313
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
+P AP N ++ A + V+W P +S G +GYK+ W + S R +
Sbjct: 1627 MPTGAPQNVA-VKAATATQLDVTWEPPPTESQNGDIQGYKIHFWEAQRQNESARVKTLFL 1685
Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
E T ++ + + + AFN A +GP S ++ T + P S+ L +++
Sbjct: 1686 PE-TGVKLKNLTGYTSYWVSIAAFNAAGDGPRSTPVTARTQQAAPSAPGSIRFSELTTTS 1744
Query: 520 FYLKWVKPEQPNGVLMGYKIKYQ 542
+ W P PNG+L GY++ Y+
Sbjct: 1745 VNVSWEPPPLPNGILEGYRLVYE 1767
Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 83/199 (41%), Gaps = 7/199 (3%)
Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
VP PSN + Q + +V W+ + G GYKV + EKD E + +
Sbjct: 1203 VPSSGPSNVS-AQATSSSNMLVRWSDIPEADCNGLILGYKVM-FKEKDSEARAQFWLAEG 1260
Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
S + ++ RVLAF +G PS I T + VPG + + ++
Sbjct: 1261 NTSRSAQLTGLGKFMLYEIRVLAFTRIGDGVPSRPPILERTLDDVPGPPVGMLFPEVRTT 1320
Query: 519 AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
+ L W P PNG+++ Y++ ++ T + E L P+T GL+P Y
Sbjct: 1321 SVRLIWQPPTAPNGIILAYQLTHRLNTTTANAAVSEVL----GPSTRQYTATGLQPEATY 1376
Query: 579 RIHLAGYTKAGDGAESKYL 597
+ T+ G G ++ L
Sbjct: 1377 LFSITAQTRKGWGEAAEAL 1395
Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 397 TVQVPLE-APSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGEG-SI 452
T+Q P + AP+N TL + + W P+ Q G+ GY+++ + DG+G ++
Sbjct: 1096 TLQAPPDVAPANVTL-RTASETSLWLRWMPLLEQEYNGNPDSVGYRIR-YLRSDGQGRAV 1153
Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQS-LE 511
+I ++ E T ++ ++ +V AFN +GP S ++ T E VP + S +
Sbjct: 1154 VHVIHDRVEREYT-IEDLEEWTEYRVQVQAFNAIGSGPWSHLVLGRTRESVPSSGPSNVS 1212
Query: 512 AIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKL 569
A SS ++W + NG+++GYK+ ++ K + T+ SA+L
Sbjct: 1213 AQATSSSNMLVRWSDIPEADCNGLILGYKVMFKE----KDSEARAQFWLAEGNTSRSAQL 1268
Query: 570 AGLEPSTKYRIHLAGYTKAGDGAESK 595
GL Y I + +T+ GDG S+
Sbjct: 1269 TGLGKFMLYEIRVLAFTRIGDGVPSR 1294
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 129/310 (41%), Gaps = 49/310 (15%)
Query: 379 YTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVID--AKKAVVSWNP----VSPQ 429
++ AQT + EA L V P + L++ D A+ ++SW P +SP
Sbjct: 1378 FSITAQTRKGWGEAAEALVVTTEKRDRPQPPSKPLVRQEDVRARSVLLSWEPGSDGLSP- 1436
Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
R Y VQT GE ++ ++ +T VD+ P + RV A N +
Sbjct: 1437 -----VRFYTVQTRELPSGEWALHPASISH-NATAFVVDRLKPFTSYKFRVKATNDIGDS 1490
Query: 490 PPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQ 542
SE +T PE P L P +++ ++W P ++ NG+L+G++++Y+
Sbjct: 1491 EYSEESESLTTLQAAPEEAPTI---LSVTPHTTTSVLIRWQPPSEDKINGILLGFRLRYR 1547
Query: 543 -----SVKGTKVGPL-------LERLPY-----ISDPTTTSAKLAGLEPSTKYRIHLAGY 585
S++G + + E P +S+ + T +L L +Y I ++ Y
Sbjct: 1548 ELLYDSLRGFTLHGIGNPGATWAELTPVYAVHNLSEVSLTQYELDNLSKHRRYEIRMSVY 1607
Query: 586 TKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRI- 639
G+G S + +F +P P NV + +T L ++W P N Y+I
Sbjct: 1608 NAVGEGPPSPPQEVFVGEAMPTGAPQNVAVKAATATQLDVTWEPPPTESQNGDIQGYKIH 1667
Query: 640 FWRRHNTGEA 649
FW E+
Sbjct: 1668 FWEAQRQNES 1677
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 142/351 (40%), Gaps = 52/351 (14%)
Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
LT + ++ T + Q ++ + +T++ VP E P T + + +
Sbjct: 963 LTALTTYTIEVAAMTSKGQGQV----SSSTISSGVPPELPGAPTNLGISN---------- 1008
Query: 426 VSPQSLRGHFR-GY---------KVQTWTEKDGE----GSIRELIVNKGESTTTEVDKFV 471
+ P+S+ FR GY +V+ ++GE G + +L N+ ++ + EV
Sbjct: 1009 IGPRSVTLQFRPGYDGKTSISRWQVEAQVGQNGEAEEWGLVHQL-ANEPDARSLEVPNLN 1067
Query: 472 PASKNFARVLAFNGAYNGPPS----EIISFVTPEGV-PGTVQSLEAIPLGSSAFYLKWV- 525
P + R+ N PPS I + P V P V A ++ +L+W+
Sbjct: 1068 PYTYYSFRMRQVNIVGTSPPSLPSRRIQTLQAPPDVAPANVTLRTA---SETSLWLRWMP 1124
Query: 526 ---KPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
+ N +GY+I+Y G + I D + LE T+YR+ +
Sbjct: 1125 LLEQEYNGNPDSVGYRIRYLRSDGQGRA----VVHVIHDRVEREYTIEDLEEWTEYRVQV 1180
Query: 583 AGYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKY 637
+ G G S + VP P NV + ++ +N+++ W+ +PE + N Y
Sbjct: 1181 QAFNAIGSGPWSHLVLGRTRESVPSSGPSNVSAQATSSSNMLVRWSDIPEADCNGLILGY 1240
Query: 638 RIFWRRHNTGEAWNQDDVLDWRQSELV-LANQPTFQPYEIKVVQTWTEKDG 687
++ ++ ++ EA Q + + S L F YEI+V+ DG
Sbjct: 1241 KVMFKEKDS-EARAQFWLAEGNTSRSAQLTGLGKFMLYEIRVLAFTRIGDG 1290
Score = 42.0 bits (97), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 12/171 (7%)
Query: 430 SLRG---HFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
SLRG H G TW E ++ L ++ T E+D + R+ +N
Sbjct: 1553 SLRGFTLHGIGNPGATWAELTPVYAVHNL--SEVSLTQYELDNLSKHRRYEIRMSVYNAV 1610
Query: 487 YNGPPSEIISFVTPEGVP-GTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQS 543
GPPS E +P G Q++ ++ + W P E NG + GYKI +
Sbjct: 1611 GEGPPSPPQEVFVGEAMPTGAPQNVAVKAATATQLDVTWEPPPTESQNGDIQGYKIHFWE 1670
Query: 544 VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
+ ++ L ++ + T KL L T Y + +A + AGDG S
Sbjct: 1671 AQRQNESARVKTL-FLPE---TGVKLKNLTGYTSYWVSIAAFNAAGDGPRS 1717
>sp|P35331|NRCAM_CHICK Neuronal cell adhesion molecule OS=Gallus gallus PE=1 SV=1
Length = 1284
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 162/528 (30%), Positives = 242/528 (45%), Gaps = 48/528 (9%)
Query: 43 EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
+V LR + L CI G P P W K+G + P++R N+ K+L I V +D G+Y
Sbjct: 256 KVELRGNVLLLECIAAGLPTPVIRWIKEGGEL-PANRTFFENFKKTLKIIDVSEADSGNY 314
Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
C N +G + + I ++V AAPY+ P + + E T C+A+G P+P I W+ N
Sbjct: 315 KCTARNTLG-STHHVISVTVKAAPYWITAPRNLVLSPGEDGTLICRANGNPKPSISWLTN 373
Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI- 221
G PI+ AP +P RKV + I +++ + Y CNA+N GY+ + +VNVLA P I
Sbjct: 374 GVPIAIAPEDPSRKVDGDTIIFSAVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRIL 433
Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAF 279
T A K + ++ C FG+PKPE+ W K L G Y + G L+I
Sbjct: 434 TPANKLYQVIADSPALIDCAYFGSPKPEIEWFRGVKGSILRGNEYVFHDNGTLEIPVAQK 493
Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
+G YTC ARNKLG Q L VK+ T I QP+ ++ A+F C DP+L
Sbjct: 494 DSTGTYTCVARNKLGKTQNEVQLEVKDPTMIIKQPQYKVIQRSAQASFECVIKHDPTLIP 553
Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
+++WL+ + + + RF+ D +LT+ ++ D G YTC T LD + A A LTV
Sbjct: 554 TVIWLKDNN--ELPDDERFLVGKD-NLTIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVV 610
Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGS-IRELIVN 458
P+ +I A+ NP L G +W + S I ++
Sbjct: 611 AAPPTPA------IIYARP-----NPPLDLELTGQLERSIELSWVPGEENNSPITNFVIE 659
Query: 459 -----------------KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IIS 496
G TT ++ K P RV+A N PSE +
Sbjct: 660 YEDGLHEPGVWHYQTEVPGSHTTVQL-KLSPYVNYSFRVIAVNEIGRSQPSEPSEQYLTK 718
Query: 497 FVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQ 542
P+ P VQ + + P + W +K Q NG + YK+ ++
Sbjct: 719 SANPDENPSNVQGIGSEP---DNLVITWESLKGFQSNGPGLQYKVSWR 763
Score = 130 bits (326), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 167/671 (24%), Positives = 266/671 (39%), Gaps = 91/671 (13%)
Query: 59 GTPLPQTIWSKDGVPINP-SDRISQGNYGKSLIIKHVEFSD-QGSYTC--EVSNGVGEAK 114
G P P W + P S+R+SQG G L +V+ D + Y C ++ +
Sbjct: 167 GLPPPIIFWMDNAFQRLPQSERVSQGLNG-DLYFSNVQPEDTRVDYICYARFNHTQTIQQ 225
Query: 115 SYSIDLSVLAAPYFTVEPEFI--------NAAEEE--TVTFECKASGLPEPEIHWVHNGK 164
I + V + T P + N E + EC A+GLP P I W+ G
Sbjct: 226 KQPISVKVFSTKPVTERPPVLLTPMGSTSNKVELRGNVLLLECIAAGLPTPVIRWIKEGG 285
Query: 165 PISQAPPNPRRKVGPNRITIENLRKS---------DTGNYGCNATNSLGYVYKDVYVNVL 215
++ NR EN +K+ D+GNY C A N+LG + + V V
Sbjct: 286 -----------ELPANRTFFENFKKTLKIIDVSEADSGNYKCTARNTLGSTHHVISVTVK 334
Query: 216 AHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD---L 272
A AP AP++ G+ L CR G PKP ++W+ N + D +
Sbjct: 335 A-APYWITAPRNLVLSPGEDGTLICRANGNPKPSISWLTNGVPIAIAPEDPSRKVDGDTI 393
Query: 273 KITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED--YEVEAGQSATFRCN 330
+ V S Y C A N+ G + + V P + Y+V A A C
Sbjct: 394 IFSAVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPANKLYQVIADSPALIDCA 453
Query: 331 AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
P K I W RG + +V ++ +L + + + +G YTC A+ +L
Sbjct: 454 YFGSP--KPEIEWFRGVKGSILRGN-EYVFHDNGTLEIPVAQKDSTGTYTCVARNKLGKT 510
Query: 391 EAQATLTVQVP---LEAPSNFTLIQVIDAK-KAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
+ + L V+ P ++ P + + A + V+ +P ++ W +
Sbjct: 511 QNEVQLEVKDPTMIIKQPQYKVIQRSAQASFECVIKHDPTLIPTV----------IWLKD 560
Query: 447 DGE---------GSIRELIVN---KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 494
+ E G I+N K + T T + S + + VL A PP+
Sbjct: 561 NNELPDDERFLVGKDNLTIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVVAA---PPTPA 617
Query: 495 ISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQS-VKGTKVGPLL 553
I + P LE + L WV E+ N + + I+Y+ + V
Sbjct: 618 IIYARP----NPPLDLELTGQLERSIELSWVPGEENNSPITNFVIEYEDGLHEPGVWHYQ 673
Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES----KYLFYV--PFKNPDN 607
+P TT KL+ P Y + + G S +YL P +NP N
Sbjct: 674 TEVP--GSHTTVQLKLS---PYVNYSFRVIAVNEIGRSQPSEPSEQYLTKSANPDENPSN 728
Query: 608 VEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLAN 667
V+G GS P+NLVI+W ++ + N P +Y++ WR+ + + W V+ S+ +++
Sbjct: 729 VQGIGSEPDNLVITWESLKGFQSNGPGLQYKVSWRQKDVDDEWTS--VVVANVSKYIVSG 786
Query: 668 QPTFQPYEIKV 678
PTF PYEIKV
Sbjct: 787 TPTFVPYEIKV 797
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 140/591 (23%), Positives = 239/591 (40%), Gaps = 79/591 (13%)
Query: 55 CIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
C + G+P P+ W + G + ++ + N +L I + G+YTC N +G+
Sbjct: 452 CAYFGSPKPEIEWFRGVKGSILRGNEYVFHDN--GTLEIPVAQKDSTGTYTCVARNKLGK 509
Query: 113 AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPE--PEIHWVHNGKPISQAP 170
++ + L V +P++ +FEC P P + W+ + ++ P
Sbjct: 510 TQN-EVQLEVKDPTMIIKQPQYKVIQRSAQASFECVIKHDPTLIPTVIWLKDN---NELP 565
Query: 171 PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP----------- 219
+ R VG + +TI N+ D G Y C +L V + V+A P
Sbjct: 566 DDERFLVGKDNLTIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVVAAPPTPAIIYARPNP 625
Query: 220 --------------EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
E++ P +E V+ G +P V W H Q E+ G T
Sbjct: 626 PLDLELTGQLERSIELSWVPGEENNSPITNFVIEYE-DGLHEPGV-W-HYQTEVPGSHTT 682
Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGS--------GSLTVKEHTH----ITDQ 313
+ LK++ + + A N++G +Q S S E+ I +
Sbjct: 683 V----QLKLSPYV---NYSFRVIAVNEIGRSQPSEPSEQYLTKSANPDENPSNVQGIGSE 735
Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
P++ + F+ N P L+ + W + ++ S V +N V+ +
Sbjct: 736 PDNLVITWESLKGFQSNG---PGLQYKVSWRQKDVDDEWTS---VVVANVSKYIVSGTPT 789
Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQ----VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQ 429
+ +A +L + + + +P+ AP N + VI++ A V W+PV +
Sbjct: 790 FVPYEIKVQALNDLGYAPEPSEVIGHSGEDLPMVAPGNVQ-VHVINSTLAKVHWDPVPLK 848
Query: 430 SLRGHFRGYKVQTW-----TEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN 484
S+RGH +GYKV W + + ++++ +G T + P S V N
Sbjct: 849 SVRGHLQGYKVYYWKVQSLSRRSKRHVEKKILTFRGNKTFGMLPGLEPYSSYKLNVRVVN 908
Query: 485 GAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
G GP S F TPEGVP L+ + L+W P PNGVL Y +K+Q +
Sbjct: 909 GKGEGPASPDKVFKTPEGVPSPPSFLKITNPTLDSLTLEWGSPTHPNGVLTSYILKFQPI 968
Query: 545 KGT-KVGPLLE-RLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAE 593
T ++GPL+E R+P +S L L ST+Y+ + T G G++
Sbjct: 969 NNTHELGPLVEIRIPA----NESSLILKNLNYSTRYKFYFNAQTSVGSGSQ 1015
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 148/616 (24%), Positives = 223/616 (36%), Gaps = 81/616 (13%)
Query: 53 LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
L C G P P W +GVPI +PS ++ G ++I V+ Y C S
Sbjct: 356 LICRANGNPKPSISWLTNGVPIAIAPEDPSRKVD----GDTIIFSAVQERSSAVYQCNAS 411
Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
N G + + ++VLA P + P + + +C G P+PEI W G
Sbjct: 412 NEYGYLLANAF-VNVLAEPPRILTPANKLYQVIADSPALIDCAYFGSPKPEIEWFR-GVK 469
Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
S N + I +K TG Y C A N LG +V + V I + P
Sbjct: 470 GSILRGNEYVFHDNGTLEIPVAQKDSTGTYTCVARNKLGKTQNEVQLEV-KDPTMIIKQP 528
Query: 226 KDEYTVDGKTVVLTCRVFGAPK--PEVNWIHNQKELTGGRYTILETGDLKITDVAFADSG 283
+ + C + P P V W+ + EL ++ +L I +V D G
Sbjct: 529 QYKVIQRSAQASFECVIKHDPTLIPTVIWLKDNNELPDDERFLVGKDNLTIMNVTDKDDG 588
Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVW 343
YTC L + S LTV + P + A + + + W
Sbjct: 589 TYTCIVNTTLDSVSASAVLTV-----VAAPPTPAIIYARPNPPLDLELTGQLERSIELSW 643
Query: 344 LRGSE---PI--------DFESEP------------------RFVQSNDYSLTVTKSSEL 374
+ G E PI D EP + +YS V +E+
Sbjct: 644 VPGEENNSPITNFVIEYEDGLHEPGVWHYQTEVPGSHTTVQLKLSPYVNYSFRVIAVNEI 703
Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
Q ++ ++ A P E PSN I + V++W + G
Sbjct: 704 GRSQ---PSEPSEQYLTKSAN-----PDENPSNVQGIGS-EPDNLVITWESLKGFQSNGP 754
Query: 435 FRGYKVQTWTEKDGEGSIRELIV-NKGESTTTEVDKFVPASKNFARVLAFNG-AYNGPPS 492
YKV +W +KD + ++V N + + FVP +V A N Y PS
Sbjct: 755 GLQYKV-SWRQKDVDDEWTSVVVANVSKYIVSGTPTFVPYE---IKVQALNDLGYAPEPS 810
Query: 493 EIISFV---TPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT 547
E+I P PG VQ + S+ + W V + G L GYK+ Y V+
Sbjct: 811 EVIGHSGEDLPMVAPGNVQ---VHVINSTLAKVHWDPVPLKSVRGHLQGYKVYYWKVQSL 867
Query: 548 --KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
+ +E+ T L GLEP + Y++++ G+G S FK P
Sbjct: 868 SRRSKRHVEKKILTFRGNKTFGMLPGLEPYSSYKLNVRVVNGKGEGPASPDKV---FKTP 924
Query: 606 DNVEGRGSTPNNLVIS 621
EG S P+ L I+
Sbjct: 925 ---EGVPSPPSFLKIT 937
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 122/296 (41%), Gaps = 30/296 (10%)
Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS---QAPPNPRRKVGPNRITIENLRKSDT--GNY 195
E + +C+A G P P W NG A + G + I N K++ G Y
Sbjct: 57 ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDAQVTMKPNSGTLVVNIMNGVKAEAYEGVY 116
Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEIT-EAPKDEYTVDGKTVVLTCR-VFGAPKPEVNWI 253
C A N G + V + +P T E + + +G ++VL CR G P P + W+
Sbjct: 117 QCTARNERGAAISNNIVIRPSRSPLWTKEKLEPNHVREGDSLVLNCRPPVGLPPPIIFWM 176
Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSG-EYTCFAR-NKLGTAQGSGSLTVKEHTH 309
N Q+ R + GDL ++V D+ +Y C+AR N T Q ++VK +
Sbjct: 177 DNAFQRLPQSERVSQGLNGDLYFSNVQPEDTRVDYICYARFNHTQTIQQKQPISVKVFST 236
Query: 310 --ITDQPEDYEVEAGQSAT----------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPR 357
+T++P G ++ C A P+ I W++ E + +
Sbjct: 237 KPVTERPPVLLTPMGSTSNKVELRGNVLLLECIAAGLPT--PVIRWIK--EGGELPANRT 292
Query: 358 FVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTL 410
F ++ +L + SE DSG Y C A+ L ++TV+ + AP N L
Sbjct: 293 FFENFKKTLKIIDVSEADSGNYKCTARNTLGSTHHVISVTVKAAPYWITAPRNLVL 348
Score = 38.9 bits (89), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 55/146 (37%), Gaps = 11/146 (7%)
Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWI 253
+ C ++L + L+ P IT+ +Y VD + +V+ C G P P +W
Sbjct: 17 FLCQMISALDVPLDSKLLEELSQPPTITQQSPKDYIVDPRENIVIQCEAKGKPPPSFSWT 76
Query: 254 HNQKEL---TGGRYTILETGDLKITDV-----AFADSGEYTCFARNKLGTAQGSGSLTVK 305
N + T+ + ++ A A G Y C ARN+ G A + +
Sbjct: 77 RNGTHFDIDKDAQVTMKPNSGTLVVNIMNGVKAEAYEGVYQCTARNERGAAISNNIVIRP 136
Query: 306 EHTHI--TDQPEDYEVEAGQSATFRC 329
+ + ++ E V G S C
Sbjct: 137 SRSPLWTKEKLEPNHVREGDSLVLNC 162
>sp|Q6V4S5|SDK2_MOUSE Protein sidekick-2 OS=Mus musculus GN=Sdk2 PE=2 SV=1
Length = 2176
Score = 214 bits (546), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 176/606 (29%), Positives = 259/606 (42%), Gaps = 34/606 (5%)
Query: 40 RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
+ V +V + C+ PL + +W KDG P+ S IS +Y + L I + S
Sbjct: 226 KNTSVVAGTSEVTMECVANARPLIKLHIVWKKDGAPL--SSGIS--DYNRRLTIANPTVS 281
Query: 98 DQGSYTCEV---SNGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLP 153
D G Y CE S+ V + LSVL P F EPE I A E+ V C+A G+P
Sbjct: 282 DAGYYECEAMLRSSSVAPVTRGAY-LSVLEPPQFVREPERHITAEMEKVVDIPCRAKGVP 340
Query: 154 EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVN 213
P I W + + ++ + I L DTG C A N+ G Y+
Sbjct: 341 PPSITWYKDAALVEVGKLTRFKQRSDGGLQISGLLPDDTGMLQCFAHNAAGEAQTSTYLA 400
Query: 214 VLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILE 268
V + AP IT P D +DG +VVL C GAP+P + W ++ L G R+T+LE
Sbjct: 401 VTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLE 460
Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
+G L I+ +D+G YTC A N G + S L V T IT P+D V G A+
Sbjct: 461 SGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMV 520
Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
C DP + + VW + + E+ PR + SL ++++ D G YTCR +
Sbjct: 521 CGVTHDPRVTVRYVWEKDGATLAVETNPRIRLDRNGSLHISQTWSGDIGTYTCRVLSAGG 580
Query: 389 FIEAQATLTVQVPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD 447
A L V+ AP + + ++ + ++W P Y ++ +E +
Sbjct: 581 NDSRNAHLRVRQLPHAPEHPVATLSTVERRAINLTW--AKPFDGNSPLMRYVLEM-SENN 637
Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV 507
+I V+ E+T+ V VPA R+ A N G S+ V+ P T
Sbjct: 638 APWTILLASVDP-EATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTA 696
Query: 508 QSLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
I G + + ++W P + NG+L GY I+Y + G VG + I+D
Sbjct: 697 PPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRY-CLAGLPVG---YQFKNITDAD 752
Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNL 618
+ L L T Y I +A Y AG G S L VP P NV + +
Sbjct: 753 VNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTI 812
Query: 619 VISWTA 624
+W A
Sbjct: 813 RFTWNA 818
Score = 135 bits (341), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 182/684 (26%), Positives = 271/684 (39%), Gaps = 75/684 (10%)
Query: 34 KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
K+Q V + +R ++ F P PQ W +DG I PS RI+ +L+I
Sbjct: 124 KRQSVNHGEAAVIRAPRISSF------PRPQVTWFRDGRKIPPSSRIAI-TLENTLVILS 176
Query: 94 VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFINAAEEET------- 142
D G Y + V++ G+ K S I L+V + P + P I + +
Sbjct: 177 TVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSE 236
Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
VT EC A+ P ++H W +G P+S + R R+TI N SD G Y C A
Sbjct: 237 VTMECVANARPLIKLHIVWKKDGAPLSSGISDYNR-----RLTIANPTVSDAGYYECEAM 291
Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
++S+ V + Y++VL P+ P+ T + + VV + CR G P P + W +
Sbjct: 292 LRSSSVAPVTRGAYLSVL-EPPQFVREPERHITAEMEKVVDIPCRAKGVPPPSITWYKDA 350
Query: 257 KELTGGRYTILET---GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITD 312
+ G+ T + G L+I+ + D+G CFA N G AQ S L V +IT
Sbjct: 351 ALVEVGKLTRFKQRSDGGLQISGLLPDDTGMLQCFAHNAAGEAQTSTYLAVTSIAPNITR 410
Query: 313 QPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTK 370
P D V G S C P + +I W +G + S PRF SL ++
Sbjct: 411 GPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTLLESGSLLISP 468
Query: 371 SSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQS 430
+ D+G YTC A EA A L V T I ++V+ S
Sbjct: 469 THISDAGTYTCLATNSRGVDEASADLVVWA-------RTRITKPPQDQSVIKGTQASMVC 521
Query: 431 LRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFA--------RVLA 482
H V+ EKDG L V + + + S+ ++ RVL+
Sbjct: 522 GVTHDPRVTVRYVWEKDGA----TLAVETNPRIRLDRNGSLHISQTWSGDIGTYTCRVLS 577
Query: 483 FNGAYNGPPSEIISFV--TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
G + + + PE T+ ++E A L W KP N LM Y ++
Sbjct: 578 AGGNDSRNAHLRVRQLPHAPEHPVATLSTVE-----RRAINLTWAKPFDGNSPLMRYVLE 632
Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV 600
S LL + DP TS + GL P+ Y+ L G G SK V
Sbjct: 633 -MSENNAPWTILLASV----DPEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERV 687
Query: 601 ------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDD 654
P P NV G T +++I W PE N Y I + + +
Sbjct: 688 SLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKN 747
Query: 655 VLDWRQSELVLANQPTFQPYEIKV 678
+ D + L+L + + YEI+V
Sbjct: 748 ITDADVNNLLLEDLIIWTNYEIEV 771
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 106/274 (38%), Gaps = 27/274 (9%)
Query: 126 PYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITI 184
PYF EP E + C A G E W+HN + ++ R R I
Sbjct: 30 PYFKTEPVRTQVHLEGNRLVLTCMAEGSWPLEFKWLHNNRELT-------RFSLEYRYMI 82
Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RVF 243
+L ++ G Y C N +G + + +A+ E K + G+ V+ R+
Sbjct: 83 TSLDRTHAGFYRCIVRNRMGALLQRQTEVQVAYMGSFEEGEKRQSVNHGEAAVIRAPRIS 142
Query: 244 GAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSGS 301
P+P+V W + +++ R I L I D+G Y A N K G + S
Sbjct: 143 SFPRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQP 202
Query: 302 LTVK----------EHTHITDQPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEPI 350
+T+ I P++ V AG S T C A + P +KL IVW + P+
Sbjct: 203 ITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIVWKKDGAPL 262
Query: 351 DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
+ + LT+ + D+G Y C A
Sbjct: 263 S-----SGISDYNRRLTIANPTVSDAGYYECEAM 291
Score = 59.7 bits (143), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 74/177 (41%), Gaps = 11/177 (6%)
Query: 422 SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR-- 479
+WN SPQ + G +GYK+ W E E + + + V FV K F
Sbjct: 815 TWNAPSPQFINGINQGYKLIAW-EPAQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYF 872
Query: 480 --VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
VL F +GP S T E VPG V L + ++ + W +P + NG+L GY
Sbjct: 873 TSVLCFTTPGDGPRSSPQLVRTHEDVPGPVGHLSFNDILDTSLKVSWQEPGEKNGILTGY 932
Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
+I ++ T R+ + T ++ GL T Y I +A T G G S
Sbjct: 933 RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 984
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 7/199 (3%)
Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
VP P+N + + + +V W+ + G GYKV+ + EKD + R +V
Sbjct: 1202 VPSSGPTNVSALATTSSS-MLVRWSEIPEADRNGLVLGYKVR-YKEKDSDSQPRFWLVEG 1259
Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
S + ++ +VLAF +G PS I T + VPG + + ++
Sbjct: 1260 NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 1319
Query: 519 AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
+ L W P PNG+++ Y+I ++ T +E L P+ GL+P + Y
Sbjct: 1320 SVRLIWQPPAAPNGIILAYQITHRLNATTANTATVEVL----APSARQYMATGLKPESVY 1375
Query: 579 RIHLAGYTKAGDGAESKYL 597
+ T+ G G ++ L
Sbjct: 1376 LFRITAQTRKGWGEAAEAL 1394
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 2/143 (1%)
Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
VP AP N I A + V+W P + G +GYK+ W + + R +
Sbjct: 1626 VPTAAPQNVA-IHSATATQLDVTWEPPPLDNQNGDIQGYKIYFWEVQRRNLTERVKTLFL 1684
Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
E++ ++ + V AFN A +GP S T + P S++ L +++
Sbjct: 1685 AENSV-KLKNLTGYTAYMVSVAAFNAAGDGPRSTPTRGQTQQAAPSAPGSVKFSELTTTS 1743
Query: 520 FYLKWVKPEQPNGVLMGYKIKYQ 542
+ W P+ PNG L GY++ Y+
Sbjct: 1744 VNVSWDAPQFPNGPLEGYRLVYE 1766
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 128/308 (41%), Gaps = 48/308 (15%)
Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
LT + ++ T + Q ++ + +T++ VP E P T + + +
Sbjct: 962 LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGAPTNLGISN---------- 1007
Query: 426 VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
+ P+S+ FR GY +T W + G I E L++ N+ ++ + EV P
Sbjct: 1008 IGPRSVTLQFRPGYDGKTSISRWVVEAQVGVIGEGEEWLLIYQLGNEPDARSMEVPDLNP 1067
Query: 473 ASKNFARVLAFNGAYNGPPSE----IISFVTPEGV-PGTVQSLEAIPLGSSAFYLKWVK- 526
+ R+ N PPS+ I + P + P V A ++ +L+W+
Sbjct: 1068 FTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDIAPANVTLRTA---SETSLWLRWMPL 1124
Query: 527 PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
PE N +GYKIKY G G L + D + LE T+YR+ +
Sbjct: 1125 PEMEYNGNPESVGYKIKYGRSDGH--GKTLSHT--VQDRVEREYTIEDLEEWTEYRVQVQ 1180
Query: 584 GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
+ G G S+ + VP P NV +T +++++ W+ +PE + N Y+
Sbjct: 1181 AFNAIGSGPWSQAVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYK 1240
Query: 639 IFWRRHNT 646
+ ++ ++
Sbjct: 1241 VRYKEKDS 1248
Score = 40.0 bits (92), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 84/221 (38%), Gaps = 36/221 (16%)
Query: 401 PLEAPSNFTLIQVI--DAKKAVVSWNPVSPQSLRGHFRGYKVQ----------------- 441
P EAP T++ V ++ W P S + G G++++
Sbjct: 1505 PDEAP---TILSVTPHTTTSVLIRWQPPSEDKINGILLGFRIRYRELLYDGLRGFTLRGI 1561
Query: 442 -----TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS 496
W E S+R L + T E+D + R+ +N GP S
Sbjct: 1562 NNPGAKWAELTSLYSMRNL--TRPSLTQYELDNLSKHRRYEIRMSIYNAVGEGPLSPPQE 1619
Query: 497 FVTPEGVPGTV-QSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLL 553
E VP Q++ ++ + W P + NG + GYKI + V+ + +
Sbjct: 1620 VFVGEAVPTAAPQNVAIHSATATQLDVTWEPPPLDNQNGDIQGYKIYFWEVQRRNLTERV 1679
Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
+ L ++++ S KL L T Y + +A + AGDG S
Sbjct: 1680 KTL-FLAE---NSVKLKNLTGYTAYMVSVAAFNAAGDGPRS 1716
>sp|P97686|NRCAM_RAT Neuronal cell adhesion molecule OS=Rattus norvegicus GN=Nrcam PE=1
SV=2
Length = 1214
Score = 213 bits (542), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 162/524 (30%), Positives = 239/524 (45%), Gaps = 38/524 (7%)
Query: 46 LRNKKVELFCIFGGTPLPQTIWSK-DG-VPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
LR + L CI G P P W K DG +P+N R N+ K+L I HV +D G+Y
Sbjct: 283 LRGNVLSLECIAEGLPTPVIYWIKEDGTLPVN---RTFYRNFKKTLQIIHVSEADSGNYQ 339
Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
C N +G A ++I ++V AAPY+ V P + + E T C+A+G P+P I W+ NG
Sbjct: 340 CIAKNALG-AVHHTISVTVKAAPYWIVAPHNLVLSPGENGTLICRANGNPKPRISWLTNG 398
Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
P+ A +P RK+ + I N+++S + Y CNA+N GY+ + +VNVLA P I
Sbjct: 399 VPVEIALDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILT 458
Query: 224 APKDEYTV-DGKTVVLTCRVFGAPKPEVNWIHNQK--ELTGGRYTILETGDLKITDVAFA 280
+ Y V + +L C FG+P P + W K L Y + + G L+I
Sbjct: 459 SANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALHEDIYVLHDNGTLEIPVAQKD 518
Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
+G YTC ARNKLG A+ L +K+ T QP V+ G +F C D +L +
Sbjct: 519 STGTYTCVARNKLGMAKNEVHLEIKDPTRFIKQPGYAVVQRGSKVSFECKVKHDHTLIPT 578
Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
I+WL+ + + ++ RF D+ L V+ + D G YTC A T LD + A A L V
Sbjct: 579 ILWLKDNG--ELPNDERFSVDKDH-LVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVA 635
Query: 401 PLEAPS----------NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEG 450
P P+ + L +D K ++W P + + ++ G
Sbjct: 636 PTPTPAPIYDVPNPPFDLELTNQLD-KSVQLTWTPGDDNN--SPITKFIIEYEDAMHEAG 692
Query: 451 SIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE-----IISFVTPEGVPG 505
R G TT ++ K P RV+A N PSE + P+ P
Sbjct: 693 LWRHQAEVSGTQTTAQL-KLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPT 751
Query: 506 TVQSLEAIPLGSSAFYLKWVKPE---QPNGVLMGYKIKYQSVKG 546
V+ L P + W KP Q NG + YK+ ++ G
Sbjct: 752 AVEGLGTEP---DNLVITW-KPLNGFQSNGPGLQYKVSWRQKDG 791
Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 136/560 (24%), Positives = 236/560 (42%), Gaps = 50/560 (8%)
Query: 143 VTFECKASGLPEPEIHWVHNGK--PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT 200
++ EC A GLP P I+W+ P+++ +K + I ++ ++D+GNY C A
Sbjct: 288 LSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKKT----LQIIHVSEADSGNYQCIAK 343
Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN--QKE 258
N+LG V+ + V V A AP AP + G+ L CR G PKP ++W+ N E
Sbjct: 344 NALGAVHHTISVTVKA-APYWIVAPHNLVLSPGENGTLICRANGNPKPRISWLTNGVPVE 402
Query: 259 LTGGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPE 315
+ + GD + ++V + S Y C A NK G + + V +T
Sbjct: 403 IALDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILTSANT 462
Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
Y+V A + A C P +I W +G++ E +V ++ +L + + +
Sbjct: 463 LYQVIANRPALLDCAFFGSP--MPTIEWFKGTKGSALH-EDIYVLHDNGTLEIPVAQKDS 519
Query: 376 SGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
+G YTC A+ +L + + L ++ P ++ P + ++Q + + VS+ ++
Sbjct: 520 TGTYTCVARNKLGMAKNEVHLEIKDPTRFIKQPG-YAVVQ----RGSKVSFE----CKVK 570
Query: 433 GHFRGYKVQTWTEKDGEGSIRE-LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
W + +GE E V+K ++V + A +
Sbjct: 571 HDHTLIPTILWLKDNGELPNDERFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVSA--- 627
Query: 492 SEIISFVTPEGVPGTVQSLEAIPLG-------SSAFYLKWVKPEQPNGVLMGYKIKYQSV 544
S ++ V P P + + P + L W + N + + I+Y+
Sbjct: 628 SAVLRVVAPTPTPAPIYDVPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYED- 686
Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG----AESKYLFYV 600
L +S T T+A+L L P Y + G A +YL
Sbjct: 687 -AMHEAGLWRHQAEVSG-TQTTAQLK-LSPYVNYSFRVMAENSIGRSVPSEASEQYLTKA 743
Query: 601 --PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDW 658
P +NP VEG G+ P+NLVI+W + + N P +Y++ WR+ + + W V+
Sbjct: 744 AEPDQNPTAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTS--VVVA 801
Query: 659 RQSELVLANQPTFQPYEIKV 678
S+ +++ PTF PY IKV
Sbjct: 802 NVSKYIVSGTPTFVPYLIKV 821
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 96/201 (47%), Gaps = 12/201 (5%)
Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
+P+ AP N + V+++ A W+PV P+S+RGH +GY++ W + R I K
Sbjct: 844 LPMVAPGNVR-VSVVNSTLAEAHWDPVPPKSVRGHLQGYRIYYWKAQSSSKRNRRHIEKK 902
Query: 460 -----GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
G T + P S V NG GP S F TPEGVP SL+ +
Sbjct: 903 ILTFQGSKTHGMLPGLQPYSHYVLNVRVVNGKGEGPASADRGFHTPEGVPSAPSSLKIVN 962
Query: 515 LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-KVGPLLE-RLPYISDPTTTSAKLAGL 572
+ L+W P PNG+L Y +KYQ + T ++GPL++ ++P T L L
Sbjct: 963 PTLDSLTLEWDPPSHPNGILTEYILKYQPINSTHELGPLVDLKIPA----NKTRWTLKNL 1018
Query: 573 EPSTKYRIHLAGYTKAGDGAE 593
ST+Y+ + T G G++
Sbjct: 1019 NFSTRYKFYFYAQTSVGSGSQ 1039
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 121/317 (38%), Gaps = 53/317 (16%)
Query: 141 ETVTFECKASGLPEPEIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLR--KSDT--GNY 195
E + +C+A G P P W NG P K G + I + K++T G Y
Sbjct: 62 ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGSGTLVINIMSEGKAETYEGVY 121
Query: 196 GCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWI 253
C A N G + V + +P T+ + + G+++VL CR G P + W+
Sbjct: 122 QCTARNERGAAVSNNIVVRPSRSPLWTKERLEPIILRSGQSLVLPCRPPIGLPPAIIFWM 181
Query: 254 HN--QKELTGGRYTILETGDLKITDVAFADSGE-YTCFAR-------------------- 290
N Q+ R + GDL ++V D+ E Y C+AR
Sbjct: 182 DNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISLKVISV 241
Query: 291 --------NKLGTAQGSGSLTVKEHTHITDQPEDYEVEA----GQSATFRCNAVSDPSLK 338
L + G+ + KE PE E G + C A P+
Sbjct: 242 DELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNESHKEELRGNVLSLECIAEGLPT-- 299
Query: 339 LSIVWLR--GSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
I W++ G+ P++ F ++ +L + SE DSG Y C A+ L + ++
Sbjct: 300 PVIYWIKEDGTLPVNR----TFYRNFKKTLQIIHVSEADSGNYQCIAKNALGAVHHTISV 355
Query: 397 TVQVP---LEAPSNFTL 410
TV+ + AP N L
Sbjct: 356 TVKAAPYWIVAPHNLVL 372
Score = 38.5 bits (88), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 11/146 (7%)
Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGK-TVVLTCRVFGAPKPEVNWI 253
+ C ++L ++ L P IT+ +Y +D + +V+ C G P P +W
Sbjct: 22 FLCQMISALDVPLDPKLLDDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWT 81
Query: 254 HNQKELTGGRYTILE----TGDLKITDVAFADS----GEYTCFARNKLGTAQGSGSLTVK 305
N + ++ +G L I ++ + G Y C ARN+ G A + +
Sbjct: 82 RNGTHFDIDKDPLVTMKPGSGTLVINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRP 141
Query: 306 EHTHI--TDQPEDYEVEAGQSATFRC 329
+ + ++ E + +GQS C
Sbjct: 142 SRSPLWTKERLEPIILRSGQSLVLPC 167
>sp|Q58EX2|SDK2_HUMAN Protein sidekick-2 OS=Homo sapiens GN=SDK2 PE=1 SV=3
Length = 2172
Score = 209 bits (532), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 177/605 (29%), Positives = 256/605 (42%), Gaps = 32/605 (5%)
Query: 40 RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS 97
+ V +V L C+ PL + IW KDGV + S IS N + L I + S
Sbjct: 222 KNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGVLL--SGGISDHN--RRLTIPNPTGS 277
Query: 98 DQGSYTCEVSNGVGEAKSY--SIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPE 154
D G Y CE S LSVL P F EPE I A E+ V C+A G+P
Sbjct: 278 DAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQFVKEPERHITAEMEKVVDIPCQAKGVPP 337
Query: 155 PEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV 214
P I W + + R+ + I L DTG + C A N+ G V Y+ V
Sbjct: 338 PSITWYKDAAVVEVEKLTRFRQRNDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAV 397
Query: 215 LAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTILET 269
+ AP IT P D +DG +VVL C GAP+P + W ++ L G R+T LE+
Sbjct: 398 TSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLES 457
Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
G L I+ +D+G YTC A N G + S L V T IT P+D V G A+ C
Sbjct: 458 GSLLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVC 517
Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
DP + + +W + + ES PR + SL ++++ D G YTCR +
Sbjct: 518 GVTHDPRVTIRYIWEKDGATLGTESHPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGN 577
Query: 390 IEAQATLTVQVPLEAPSN-FTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
A L V+ AP + + ++ + ++W P Y ++ +E +
Sbjct: 578 DSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWT--KPFDGNSPLIRYILEM-SENNA 634
Query: 449 EGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ 508
++ V+ ++T+ V VPA R+ A N G S+ V+ P T
Sbjct: 635 PWTVLLASVDP-KATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAP 693
Query: 509 SLEAIPLGSS--AFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT 564
I G + + ++W P + NG+L GY I+Y + G VG + I+D
Sbjct: 694 PQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRY-CLAGLPVG---YQFKNITDADV 749
Query: 565 TSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGSTPNNLV 619
+ L L T Y I +A Y AG G S L VP P NV + +
Sbjct: 750 NNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIR 809
Query: 620 ISWTA 624
+W A
Sbjct: 810 FTWNA 814
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 179/686 (26%), Positives = 274/686 (39%), Gaps = 79/686 (11%)
Query: 34 KQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH 93
K Q V+ + +R ++ F P PQ W +DG I PS RI+ +L+I
Sbjct: 120 KHQSVSHGEAAVIRAPRIASF------PQPQVTWFRDGRKIPPSSRIAI-TLENTLVILS 172
Query: 94 VEFSDQGSYTCE-VSNGVGEAK-SYSIDLSV--LAAPYFTVEPEFINAAEEET------- 142
D G Y + V++ G+ K S I L+V + P + P I + +
Sbjct: 173 TVAPDAGRYYVQAVNDKNGDNKTSQPITLTVENVGGPADPIAPTIIIPPKNTSVVAGTSE 232
Query: 143 VTFECKASGLPEPEIH--WVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA- 199
VT EC A+ P ++H W +G +S + R R+TI N SD G Y C A
Sbjct: 233 VTLECVANARPLIKLHIIWKKDGVLLSGGISDHNR-----RLTIPNPTGSDAGYYECEAV 287
Query: 200 --TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVV-LTCRVFGAPKPEVNWIHNQ 256
++S+ V + Y++VL P+ + P+ T + + VV + C+ G P P + W +
Sbjct: 288 LRSSSVPSVVRGAYLSVL-EPPQFVKEPERHITAEMEKVVDIPCQAKGVPPPSITWYKDA 346
Query: 257 -----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HI 310
++LT R+ G L+I+ + D+G + CFARN G Q S L V +I
Sbjct: 347 AVVEVEKLT--RFRQRNDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAVTSIAPNI 404
Query: 311 TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTV 368
T P D V G S C P + +I W +G + S PRF SL +
Sbjct: 405 TRGPLDSTVIDGMSVVLACETSGAP--RPAITWQKGERILASGSVQLPRFTPLESGSLLI 462
Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAV-VSWN 424
+ + D+G YTC A EA A L V + P + ++I+ A V+ +
Sbjct: 463 SPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVCGVTHD 522
Query: 425 P-VSPQSL---RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
P V+ + + G G + D GS+ G+ T + + A N +R
Sbjct: 523 PRVTIRYIWEKDGATLGTESHPRIRLDRNGSLHISQTWSGDIGTYTC-RVISAGGNDSRS 581
Query: 481 --LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
L + P + + T E A L W KP N L+ Y
Sbjct: 582 AHLRVRQLPHAPEHPVATLSTVE---------------RRAINLTWTKPFDGNSPLIRYI 626
Query: 539 IKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLF 598
++ S LL + DP TS + GL P+ Y+ L G G SK
Sbjct: 627 LE-MSENNAPWTVLLASV----DPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTE 681
Query: 599 YV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
V P P NV G T +++I W PE N Y I + +
Sbjct: 682 RVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQF 741
Query: 653 DDVLDWRQSELVLANQPTFQPYEIKV 678
++ D + L+L + + YEI+V
Sbjct: 742 KNITDADVNNLLLEDLIIWTNYEIEV 767
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 11/177 (6%)
Query: 422 SWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFAR-- 479
+WN SPQ + G +GYK+ W E + E + + + V FV K F
Sbjct: 811 TWNAPSPQFINGINQGYKLIAW-EPEQEEEVTMVTARPNFQDSIHVG-FVSGLKKFTEYF 868
Query: 480 --VLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
VL F +GP S T E VPG V L + ++ + W +P + NG+L GY
Sbjct: 869 TSVLCFTTPGDGPRSTPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGY 928
Query: 538 KIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
+I ++ T R+ + T ++ GL T Y I +A T G G S
Sbjct: 929 RISWEEYNRTNT-----RVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVS 980
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 109/274 (39%), Gaps = 27/274 (9%)
Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
+PYF EP E + C A G E W+HN + +++ R
Sbjct: 25 SPYFKTEPVRTQVHLEGNRLVLTCMAEGSWPLEFKWLHNNRELTKFSLE-------YRYM 77
Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTC-RV 242
I +L ++ G Y C N +G + + +A+ E K + G+ V+ R+
Sbjct: 78 ITSLDRTHAGFYRCIVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAAVIRAPRI 137
Query: 243 FGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFADSGEYTCFARN-KLGTAQGSG 300
P+P+V W + +++ R I L I D+G Y A N K G + S
Sbjct: 138 ASFPQPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQ 197
Query: 301 --SLTVKEHTHITD--------QPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEP 349
+LTV+ D P++ V AG S T C A + P +KL I+W +
Sbjct: 198 PITLTVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGVL 257
Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
+ + ++ LT+ + D+G Y C A
Sbjct: 258 LSGG-----ISDHNRRLTIPNPTGSDAGYYECEA 286
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
VP AP N ++ A + V+W P S G +GYK+ W + G + R +
Sbjct: 1622 VPTAAPRNV-VVHGATATQLDVTWEPPPLDSQNGDIQGYKIYFWEAQRGNLTERVKTLFL 1680
Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSA 519
E++ ++ + V AFN A +GP S T + P S++ L +++
Sbjct: 1681 AENSV-KLKNLTGYTAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSAPSSVKFSELTTTS 1739
Query: 520 FYLKWVKPEQPNGVLMGYKIKYQ 542
+ W P+ PNG+L GY++ Y+
Sbjct: 1740 VNVSWEAPQFPNGILEGYRLVYE 1762
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 138/347 (39%), Gaps = 48/347 (13%)
Query: 379 YTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVID--AKKAVVSWNP----VSPQ 429
+ AQT + EA L V P + ++Q D A+ ++SW P +SP
Sbjct: 1373 FRITAQTRKGWGEAAEALVVTTEKRDRPQPPSRPMVQQEDVRARSVLLSWEPGSDGLSP- 1431
Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
R Y +QT G ++ V+ S+ VD+ P + RV A N +
Sbjct: 1432 -----VRYYTIQTRELPSGRWALHSASVSHNASSFI-VDRLKPFTSYKFRVKATNDIGDS 1485
Query: 490 PPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQ 542
SE +T P+ P L P +++ ++W P ++ NG+L+G++I+Y+
Sbjct: 1486 EFSEESESLTTLQAAPDEAPTI---LSVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYR 1542
Query: 543 SV--KGTKVGPL---------------LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
+ +G + L + + +S P+ T +L L +Y I ++ Y
Sbjct: 1543 ELLYEGLRGFTLRGINNPGATWAELTSMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVY 1602
Query: 586 TKAGDGAES--KYLFY---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIF 640
G+G S + +F VP P NV G+T L ++W P N Y+I+
Sbjct: 1603 NAVGEGPSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQNGDIQGYKIY 1662
Query: 641 WRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDG 687
+ G + L ++ + L N + Y + V DG
Sbjct: 1663 FWEAQRGNLTERVKTLFLAENSVKLKNLTGYTAYMVSVAAFNAAGDG 1709
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 7/199 (3%)
Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
VP P+N + + + +V W+ V G GYKV + EKD + R +V
Sbjct: 1198 VPSSGPTNVSALATTSSS-MLVRWSEVPEADRNGLVLGYKVM-YKEKDSDTQPRFWLVEG 1255
Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI-ISFVTPEGVPGTVQSLEAIPLGSS 518
S + ++ +VLAF +G PS I T + VPG + + ++
Sbjct: 1256 NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTT 1315
Query: 519 AFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
+ L W P PNG+++ Y+I ++ T +E L P+ GL+P + Y
Sbjct: 1316 SVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVL----APSARQYTATGLKPESVY 1371
Query: 579 RIHLAGYTKAGDGAESKYL 597
+ T+ G G ++ L
Sbjct: 1372 LFRITAQTRKGWGEAAEAL 1390
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 128/308 (41%), Gaps = 48/308 (15%)
Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
LT + ++ T + Q ++ + +T++ VP E P T + + +
Sbjct: 958 LTALTTYTIEVAAMTSKGQGQV----SASTISSGVPPELPGPPTNLGISN---------- 1003
Query: 426 VSPQSLRGHFR-GYKVQT----WTEKDGEGSIRE----LIV----NKGESTTTEVDKFVP 472
+ P+S+ FR GY +T W + G + E L++ N+ ++ + EV P
Sbjct: 1004 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNP 1063
Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVT-----PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
+ R+ N PPS+ + P+ P V A ++ +L+W+
Sbjct: 1064 FTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTA---SETSLWLRWMPL 1120
Query: 527 PEQP---NGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
PE N +GYKIKY G G L + + D + LE T+YR+ +
Sbjct: 1121 PEMEYNGNPESVGYKIKYSRSDGH--GKTLSHV--VQDRVERDYTIEDLEEWTEYRVQVQ 1176
Query: 584 GYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
+ G G S+ + VP P NV +T +++++ W+ +PE + N Y+
Sbjct: 1177 AFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYK 1236
Query: 639 IFWRRHNT 646
+ ++ ++
Sbjct: 1237 VMYKEKDS 1244
>sp|Q8AV58|SDK1_CHICK Protein sidekick-1 OS=Gallus gallus GN=SDK1 PE=2 SV=1
Length = 2169
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 180/626 (28%), Positives = 279/626 (44%), Gaps = 42/626 (6%)
Query: 40 RKKEVALRNKKVELFCIFGGTPLPQ--TIWSKDGVPINPSDRISQG--NYGKSLIIKHVE 95
+ K V + +V L C+ P+ + +W ++G+ +I+ G ++G+ L I +
Sbjct: 252 QNKSVVVGTSEVTLECVASARPVERLSIMWKRNGI------KITSGISSFGRRLTITNPT 305
Query: 96 FSDQGSYTCE--VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAE-EETVTFECKASGL 152
+D G Y CE + + E +S++ PYFT EPE + AE E+ V C+A G+
Sbjct: 306 SADVGMYFCEAKLRDSTEEPARAKAFISLMVPPYFTAEPEGVILAEVEKDVDILCQAMGV 365
Query: 153 PEPEIHWVHNGKPISQAPPNPRRKVG-PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY 211
P P + W + P+S+ NPR KV + I LR D G + C A+N G + Y
Sbjct: 366 PIPSLVWYKDSVPLSKLQ-NPRYKVLLSGGLRIHALRPQDAGIFQCFASNKAGEIQTYTY 424
Query: 212 VNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-----RYTI 266
++V P + P+D +G T +LTC V GAPKP ++W + L G R+ +
Sbjct: 425 LDVTNIKPAFIQPPEDTTVTEGMTAMLTCEVSGAPKPAISWKKGNQILASGSVQIPRFVL 484
Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
LE+G L+IT V D+G YTC A N G LTV T I PE+ V G +AT
Sbjct: 485 LESGGLQITPVFLQDAGNYTCHAVNSEGALNAFVMLTVWNRTFIVHPPENSTVIKGTTAT 544
Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
RC A DP + + VW + S I+ S R D +L ++++ D G YTC +
Sbjct: 545 LRCEATHDPRISIRYVWKKDSVVINPSSSSRITVEKDGTLLISQTWSGDIGDYTCEVISF 604
Query: 387 LDFIEAQATLTVQVPLEAPSNFTLIQVID---AKKAVVSWNPVSPQSLRGHFRGYKVQTW 443
A L V +P N L+ ++ ++ V+SW V P Y V+
Sbjct: 605 GGNDSRMARLEVIELPHSPQN--LLATLNSSYSRSVVLSW--VRPFDGNSPVLYYMVEL- 659
Query: 444 TEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGP-PSEIISFVTPEG 502
+E + + L + T+ V PA RV A N G SE + PE
Sbjct: 660 SENNSPWKV-HLSNLDPKMTSVTVSGLTPARTYQFRVCAVNQVGKGQYSSETSRLMLPEE 718
Query: 503 VPGT-VQSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
P +++ A + + ++W P + NGVL GY ++Y+ + G P + I
Sbjct: 719 PPSAPPKNIVASGRTNQSIMVQWQPPPESEHNGVLHGYILRYR-LAGL---PGEYQYKNI 774
Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-----YLFYVPFKNPDNVEGRGST 614
+ + L T+Y I +A Y AG GA S+ L VP P NV+
Sbjct: 775 TSAEINYCLVTDLIIWTQYEIQVASYNGAGLGAFSRPVTEYTLQGVPTAPPQNVQVEAVN 834
Query: 615 PNNLVISWTAMPEIEHNAPHFKYRIF 640
+ W+ P+ N + Y++
Sbjct: 835 STTIQFLWSPPPQQFINGINQGYKLL 860
Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 178/693 (25%), Positives = 265/693 (38%), Gaps = 99/693 (14%)
Query: 40 RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
+KK V V F P PQ W +DG I PS RI+ L+I +D
Sbjct: 150 QKKTVTEGEAAVLNFMHIFSYPRPQVTWFRDGHKIIPSSRIAI-TLENQLVILATSVADA 208
Query: 100 GSYTCEVSN-GVGEAK-SYSIDLSVLAA--------PYFTVEPE----FINAAEEETVTF 145
G Y + N GE K S I LS+ +A P + P+ + +E VT
Sbjct: 209 GGYYAQAVNEKNGENKTSPLIHLSIASATDPSDPTAPIIVIPPQNKSVVVGTSE---VTL 265
Query: 146 ECKASGLP--EPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNAT--- 200
EC AS P I W NG I+ + R R+TI N +D G Y C A
Sbjct: 266 ECVASARPVERLSIMWKRNGIKITSGISSFGR-----RLTITNPTSADVGMYFCEAKLRD 320
Query: 201 NSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-GKTVVLTCRVFGAPKPEVNWIHNQ--- 256
++ +++++ P T P+ + K V + C+ G P P + W +
Sbjct: 321 STEEPARAKAFISLMV-PPYFTAEPEGVILAEVEKDVDILCQAMGVPIPSLVWYKDSVPL 379
Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKE-HTHITDQPE 315
+L RY +L +G L+I + D+G + CFA NK G Q L V PE
Sbjct: 380 SKLQNPRYKVLLSGGLRIHALRPQDAGIFQCFASNKAGEIQTYTYLDVTNIKPAFIQPPE 439
Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESE--PRFVQSNDYSLTVTKSSE 373
D V G +A C P K +I W +G++ + S PRFV L +T
Sbjct: 440 DTTVTEGMTAMLTCEVSGAP--KPAISWKKGNQILASGSVQIPRFVLLESGGLQITPVFL 497
Query: 374 LDSGQYTCRAQTELDFIEAQATLTV---QVPLEAPSNFTLIQVIDA-------------- 416
D+G YTC A + A LTV + P N T+I+ A
Sbjct: 498 QDAGNYTCHAVNSEGALNAFVMLTVWNRTFIVHPPENSTVIKGTTATLRCEATHDPRISI 557
Query: 417 ----KKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
KK V NP S + EKDG I + T EV F
Sbjct: 558 RYVWKKDSVVINPSSSSRIT-----------VEKDGTLLISQTWSGDIGDYTCEVISFGG 606
Query: 473 ASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPN 531
AR+ E+I +P+ + T+ S S + L WV+P N
Sbjct: 607 NDSRMARL------------EVIELPHSPQNLLATLNSSY-----SRSVVLSWVRPFDGN 649
Query: 532 GVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
++ Y ++ S + L L DP TS ++GL P+ Y+ + + G G
Sbjct: 650 SPVLYYMVEL-SENNSPWKVHLSNL----DPKMTSVTVSGLTPARTYQFRVCAVNQVGKG 704
Query: 592 ---AESKYLFYV---PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
+E+ L P P N+ G T ++++ W PE EHN Y + +R
Sbjct: 705 QYSSETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPESEHNGVLHGYILRYRLAG 764
Query: 646 TGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
+ ++ + ++ + + YEI+V
Sbjct: 765 LPGEYQYKNITSAEINYCLVTDLIIWTQYEIQV 797
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 113/300 (37%), Gaps = 28/300 (9%)
Query: 125 APYFTVEPEFINA-AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRIT 183
APYF EP E + C A G E W+HN I+ +
Sbjct: 55 APYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWLHNDSEITTYSSE-------YKYI 107
Query: 184 IENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLT-CRV 242
I L++SD G Y C N +G + + +A+ +A + + +G+ VL +
Sbjct: 108 IPALQRSDAGFYQCIVRNRMGALLQRRSEVQVAYMGNFMDANQKKTVTEGEAAVLNFMHI 167
Query: 243 FGAPKPEVNWIHN-QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGS 301
F P+P+V W + K + R I L I + AD+G Y A N+ +
Sbjct: 168 FSYPRPQVTWFRDGHKIIPSSRIAITLENQLVILATSVADAGGYYAQAVNEKNGENKTSP 227
Query: 302 LTVKEHTHITD-----------QPEDYEVEAGQS-ATFRCNAVSDPSLKLSIVWLRGSEP 349
L TD P++ V G S T C A + P +LSI+W R
Sbjct: 228 LIHLSIASATDPSDPTAPIIVIPPQNKSVVVGTSEVTLECVASARPVERLSIMWKRNGIK 287
Query: 350 IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFT 409
I + S LT+T + D G Y C A+ D E A + L P FT
Sbjct: 288 IT-----SGISSFGRRLTITNPTSADVGMYFCEAKLR-DSTEEPARAKAFISLMVPPYFT 341
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 154/382 (40%), Gaps = 46/382 (12%)
Query: 43 EVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
++ L ++ L C+ G+ W + ++ I+ + II ++ SD G Y
Sbjct: 66 QIHLEGNRLVLTCLAEGS------WPLEFKWLHNDSEITTYSSEYKYIIPALQRSDAGFY 119
Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGL--------PE 154
C V N +G ++ V F++A +++TVT E +A+ L P
Sbjct: 120 QCIVRNRMGALLQRRSEVQV------AYMGNFMDANQKKTVT-EGEAAVLNFMHIFSYPR 172
Query: 155 PEIHWVHNGKPISQAPPNPRRKVG-PNRITIENLRKSDTGNYGCNATNSLGYVYKD---V 210
P++ W +G I P+ R + N++ I +D G Y A N K +
Sbjct: 173 PQVTWFRDGHKII---PSSRIAITLENQLVILATSVADAGGYYAQAVNEKNGENKTSPLI 229
Query: 211 YVNVLAH-------APEITEAPKDEYTVDGKT-VVLTCRVFGAP--KPEVNWIHNQKELT 260
++++ + AP I P+++ V G + V L C P + + W N ++T
Sbjct: 230 HLSIASATDPSDPTAPIIVIPPQNKSVVVGTSEVTLECVASARPVERLSIMWKRNGIKIT 289
Query: 261 GGRYTILETGDLKITDVAFADSGEYTCFARNKLGT---AQGSGSLTVKEHTHITDQPEDY 317
G + L IT+ AD G Y C A+ + T A+ +++ + T +PE
Sbjct: 290 SGISSFGR--RLTITNPTSADVGMYFCEAKLRDSTEEPARAKAFISLMVPPYFTAEPEGV 347
Query: 318 EV-EAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
+ E + C A+ P S+VW + S P+ PR+ L + D+
Sbjct: 348 ILAEVEKDVDILCQAMGVP--IPSLVWYKDSVPLSKLQNPRYKVLLSGGLRIHALRPQDA 405
Query: 377 GQYTCRAQTELDFIEAQATLTV 398
G + C A + I+ L V
Sbjct: 406 GIFQCFASNKAGEIQTYTYLDV 427
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 2/142 (1%)
Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
P AP N + + A + ++W+P S G+ +GYK+ W E D + ++ V
Sbjct: 1653 PAMAPQNIQ-VNSLSASQLELTWDPPPADSQNGNIQGYKIYYW-EGDVQNDTEKVKVFSS 1710
Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
+ ++ + AFN A +GP S + T + P L + S+
Sbjct: 1711 LRQLSASKNLTSHTRYLVCISAFNAAGDGPRSRPSAGRTHQAAPSAPSFLVFSEITSTTL 1770
Query: 521 YLKWVKPEQPNGVLMGYKIKYQ 542
+ W +P NGVL GY++ Y+
Sbjct: 1771 NVSWGEPTAANGVLQGYRVVYE 1792
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 10/203 (4%)
Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR--GYKVQTWTEKDGEGSIRE 454
T+Q P + ++ + W P+ G+ GY+++ W ++ +
Sbjct: 1120 TLQAPPDVAPGSVSVRTASESSLRMRWVPLPDTQYNGNPESVGYRIKFWRVDLQPSALLK 1179
Query: 455 LIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTV-QSLEAI 513
+I ++ E T + ++ ++ AFN GP +E++ T E VP +++ A
Sbjct: 1180 VISDRLERECT-IQDLEEWTEYELQIQAFNAIGAGPWNEVVGVRTRESVPSAPPENVSAE 1238
Query: 514 PLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAG 571
+ S+ L W V + NG+++GYKI Y++ K P R + T S L+G
Sbjct: 1239 AVSSTQILLTWSAVPESEQNGLILGYKILYKA-KDLDSEP---RSQTVRGNHTQSCLLSG 1294
Query: 572 LEPSTKYRIHLAGYTKAGDGAES 594
L Y I + +T+ GDG S
Sbjct: 1295 LRKYVLYEIRVLAFTRIGDGVPS 1317
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 119/289 (41%), Gaps = 34/289 (11%)
Query: 426 VSPQSLRGHFR-GYKVQT----WTEKDGEGSIREL--------IVNKGESTTTEVDKFVP 472
+SP+S FR GY +T W + G + E + N+ ++ EV P
Sbjct: 1033 ISPRSATLQFRPGYDGKTSICKWIVEGQVGVLGEEEEWVSLHEVDNEPDAQMLEVPNLTP 1092
Query: 473 ASKNFARVLAFNGAYNGP---PSEIISFVT--PEGVPGTVQSLEAIPLGSSAFYLKWVK- 526
+ R+ N P PS +I + P+ PG+V A S+ ++WV
Sbjct: 1093 YTHYRFRMRQVNVVGASPLSQPSRVIQTLQAPPDVAPGSVSVRTA---SESSLRMRWVPL 1149
Query: 527 PE-QPNG--VLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLA 583
P+ Q NG +GY+IK+ V + LL+ ISD + LE T+Y + +
Sbjct: 1150 PDTQYNGNPESVGYRIKFWRVD-LQPSALLK---VISDRLERECTIQDLEEWTEYELQIQ 1205
Query: 584 GYTKAGDGAESKYLFY-----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYR 638
+ G G ++ + VP P+NV + ++++W+A+PE E N Y+
Sbjct: 1206 AFNAIGAGPWNEVVGVRTRESVPSAPPENVSAEAVSSTQILLTWSAVPESEQNGLILGYK 1265
Query: 639 IFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDG 687
I ++ + V +L+ + YEI+V+ DG
Sbjct: 1266 ILYKAKDLDSEPRSQTVRGNHTQSCLLSGLRKYVLYEIRVLAFTRIGDG 1314
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 93/229 (40%), Gaps = 24/229 (10%)
Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
VP P N ++ +++ W+P Q + G +GYK+ W D GS+ + +
Sbjct: 820 VPTAPPQNVQ-VEAVNSTTIQFLWSPPPQQFINGINQGYKLLAW-PVDAPGSVTVVTIAP 877
Query: 460 G-----ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
T + K+ + + VL F +GP S T E PG V L
Sbjct: 878 DFHGVHSGCITNLKKY---TTYYTSVLCFTTPGDGPRSAPQLLRTLEDKPGAVGHLSFTE 934
Query: 515 LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
+ ++ + W +P + NG++ GY++ ++ V G L TT K+ GL
Sbjct: 935 ILDTSLKVSWQEPVEKNGIITGYQLSWE-VYGRNESRLTRT----LTNTTLEYKITGLSS 989
Query: 575 STKYRIHLAGYTKAGDG--AESKYLFYVPFKNPDNVEGRGSTPNNLVIS 621
T Y I +A T G G S VP + P P+NLVIS
Sbjct: 990 LTTYTIEVAAVTAKGSGWVTSSTISSGVPPELP-------GAPSNLVIS 1031
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 3/144 (2%)
Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
VP P N + + + + + +++W+ V G GYK+ + KD + R V
Sbjct: 1227 VPSAPPENVS-AEAVSSTQILLTWSAVPESEQNGLILGYKI-LYKAKDLDSEPRSQTVRG 1284
Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNG-PPSEIISFVTPEGVPGTVQSLEAIPLGSS 518
+ + + RVLAF +G P S +++ T + PG L + +
Sbjct: 1285 NHTQSCLLSGLRKYVLYEIRVLAFTRIGDGVPSSPVLTERTKDDAPGPPIRLVFPEVRLT 1344
Query: 519 AFYLKWVKPEQPNGVLMGYKIKYQ 542
+ + W PE+PNG+++GY+I Y+
Sbjct: 1345 SVRIVWQPPEEPNGIILGYQIAYR 1368
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 109/283 (38%), Gaps = 45/283 (15%)
Query: 343 WLRGSEPIDFESEPRFVQS----NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
W S I E+ ++S Y L V ++++ Y+ E +A T+
Sbjct: 1476 WQTYSSSISHEATSCIIESLNPFTSYKLRVKATNDIGDSDYSA---------ETEAVTTL 1526
Query: 399 Q-VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKD---GEGSIRE 454
Q VP E PS+ L+ +V W P +SL G GY++ + E D G + +
Sbjct: 1527 QDVPDEPPSS-VLVTPHTTSSVLVQWQPPKAESLNGLLLGYRIY-YRELDYDAGSATESK 1584
Query: 455 LIVN----KGESTTTEVDKFVPAS-----------KNFARVLAFNGAYN----GPPSEII 495
+ N + E T K V +S K + R AYN P S +
Sbjct: 1585 AVKNPSALRAELTPQSSFKTVNSSSALTTYELTQLKKYKRYEVLMTAYNVIGESPTSTPV 1644
Query: 496 SFVTPEGVPGTV-QSLEAIPLGSSAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPL 552
E P Q+++ L +S L W P + NG + GYKI Y V
Sbjct: 1645 EVFVGEAAPAMAPQNIQVNSLSASQLELTWDPPPADSQNGNIQGYKIYYWE---GDVQND 1701
Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK 595
E++ S SA L T+Y + ++ + AGDG S+
Sbjct: 1702 TEKVKVFSSLRQLSAS-KNLTSHTRYLVCISAFNAAGDGPRSR 1743
>sp|Q03696|NGCA_CHICK Neuronal-glial cell adhesion molecule OS=Gallus gallus PE=1 SV=2
Length = 1266
Score = 202 bits (514), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 196/717 (27%), Positives = 305/717 (42%), Gaps = 54/717 (7%)
Query: 44 VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
+ALR V L CI G P P W + P+ P GN+ K+L + V SD G Y
Sbjct: 249 IALRGGSVVLECIAEGLPTPWVRWRRLNGPLLPG---GVGNFNKTLRLWGVTESDDGEYE 305
Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
C NG G A+ + ++V AAPY+ P+ ET +C+ G P P+I W NG
Sbjct: 306 CVAENGRGTARG-THSVTVEAAPYWVRRPQSGVFGPGETARLDCEVGGKPRPQIQWSING 364
Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
PI A RR + + + LR +D+ C A N G + + +++V+ +
Sbjct: 365 VPIEAAGAE-RRWLRGGALVLPELRPNDSAVLQCEARNRHGPLLANAFLHVVELPLRMLT 423
Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
A + Y V+ +TV L CR FGAP P V W+ E L R + G L+++ V
Sbjct: 424 ADEQRYEVVENQTVFLHCRTFGAPAPNVEWLTPTLEPALQDDRSFVFTNGSLRVSAVRGG 483
Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
D G YTC A+N + L V+ T I+ P + G++ TF C A DP++
Sbjct: 484 DGGVYTCMAQNAHSNGSLTALLEVRAPTRISAPPRSATAKKGETVTFHCGATFDPAVTPG 543
Query: 341 -IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
+ WLRG +P+ +PR+ S +TV+ D G CRA T LD EA+A L +
Sbjct: 544 ELRWLRGGQPL--PDDPRY--SVAAEMTVSNVDYGDEGTIQCRASTPLDSAEAEAQL--R 597
Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQS--LRGHFRGYKVQTWTEKDGEGSIRELIV 457
V PS + +D + +SW P + + + + + G G+
Sbjct: 598 VVGRPPSRDLQVMEVDEHRVRLSWTPGDDHNSPIEKFVVEEEEEREDLQRGFGAADV--- 654
Query: 458 NKGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEI-ISFVTPEGVPGTVQSLEA 512
G+ T + P + RV+A N G ++ P + I PE PG V E
Sbjct: 655 -PGQPWTPPL-PLSPYGRFPFRVVAVNAYGRGEHHAPSAPIETPPAAPERNPGGVHG-EG 711
Query: 513 IPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK---L 569
G+ + + P+ N Y+++++ ++ G P+ +T A +
Sbjct: 712 NETGNLVITWEPLPPQAWNAPWARYRVQWRPLEEPGGGGPSGGFPWAE--STVDAPPVVV 769
Query: 570 AGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEGRGSTPNNLVISWTA 624
GL P + ++I + AG G E+ +P P+NV + + + WT
Sbjct: 770 GGLPPFSPFQIRVQAVNGAGKGPEATPGVGHSGEDLPLVYPENVGVELLNSSTVRVRWT- 828
Query: 625 MPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTE 684
+ + R+ R VL WR + ++ P ++ Q+ E
Sbjct: 829 ---LGGGPKELRGRLRGFR-----------VLYWRLGWVGERSRRQAPPDPPQIPQSPAE 874
Query: 685 KDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
L V G++ + P S+ RVL FNG +GPPSE I+F TPEG
Sbjct: 875 DPPPFPPVALTVG-GDARGALLGGLRPWSRYQLRVLVFNGRGDGPPSEPIAFETPEG 930
Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 166/385 (43%), Gaps = 38/385 (9%)
Query: 44 VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLIIKHVEFSDQ 99
V + + L C+ G P Q WS++ P P + + G+ G +I + Q
Sbjct: 47 VVFPSDDIVLKCVATGNPPVQYRWSREDQPFVPEEHGGVSVVPGS-GTLVINATLAARLQ 105
Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECKA--SGLPEPE 156
G + C +N +G A S ++ P + E + E + V C S +P P+
Sbjct: 106 GRFRCFATNALGTAVSPEANVIAENTPQWPKEKVTPVEVEEGDPVVLPCDPPESAVP-PK 164
Query: 157 IHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTG-NYGCNATNSLG---YVYK--- 208
I+W+++ I + R +G + + N D+ +Y C+A + LG + K
Sbjct: 165 IYWLNSD--IVHIAQDERVSMGQDGNLYFSNAMVGDSHPDYICHA-HFLGPRTIIQKEPL 221
Query: 209 DVYV----NVLAHAPEITEAPKDEYT----VDGKTVVLTCRVFGAPKPEVNWIH-NQKEL 259
D+ V V + P + P+D T + G +VVL C G P P V W N L
Sbjct: 222 DLRVAPSNAVRSRRPRLL-LPRDPQTTTIALRGGSVVLECIAEGLPTPWVRWRRLNGPLL 280
Query: 260 TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEV 319
GG +T L++ V +D GEY C A N GTA+G+ S+TV+ + +P+
Sbjct: 281 PGGVGNFNKT--LRLWGVTESDDGEYECVAENGRGTARGTHSVTVEAAPYWVRRPQSGVF 338
Query: 320 EAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQ 378
G++A C P + I W PI+ +E R+++ +L + + DS
Sbjct: 339 GPGETARLDCEVGGKP--RPQIQWSINGVPIEAAGAERRWLRGG--ALVLPELRPNDSAV 394
Query: 379 YTCRAQTELDFIEAQATL-TVQVPL 402
C A+ + A A L V++PL
Sbjct: 395 LQCEARNRHGPLLANAFLHVVELPL 419
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 90/207 (43%), Gaps = 33/207 (15%)
Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWN-PVSPQSLRGHFRGYKVQTWTEK-DGEGSIREL-- 455
+PL P N ++++++ V W P+ LRG RG++V W GE S R+
Sbjct: 805 LPLVYPENVG-VELLNSSTVRVRWTLGGGPKELRGRLRGFRVLYWRLGWVGERSRRQAPP 863
Query: 456 --------------------IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
+ G++ + P S+ RVL FNG +GPPSE I
Sbjct: 864 DPPQIPQSPAEDPPPFPPVALTVGGDARGALLGGLRPWSRYQLRVLVFNGRGDGPPSEPI 923
Query: 496 SFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
+F TPEGVPG + L L +A + V+ + GY ++YQ V + G L
Sbjct: 924 AFETPEGVPGPPEELRVERLDDTALSV--VERRTFKRSITGYVLRYQQV---EPGSALPG 978
Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHL 582
+ DP L GL ++YR+ L
Sbjct: 979 GSVLRDP---QCDLRGLNARSRYRLAL 1002
Score = 40.8 bits (94), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 76/183 (41%), Gaps = 18/183 (9%)
Query: 236 VVLTCRVFGAPKPEVNWIHNQK----ELTGGRYTILETGDLKI-TDVAFADSGEYTCFAR 290
+VL C G P + W + E GG + +G L I +A G + CFA
Sbjct: 54 IVLKCVATGNPPVQYRWSREDQPFVPEEHGGVSVVPGSGTLVINATLAARLQGRFRCFAT 113
Query: 291 NKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
N LGTA + + E+T ++ EVE G C+ + ++ I WL S+
Sbjct: 114 NALGTAVSPEANVIAENTPQWPKEKVTPVEVEEGDPVVLPCDP-PESAVPPKIYWLN-SD 171
Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSG-QYTCRAQTELDFIEAQATLTVQVPLE---A 404
+ + R D +L + + DS Y C A F+ + T+ + PL+ A
Sbjct: 172 IVHIAQDERVSMGQDGNLYFSNAMVGDSHPDYICHAH----FLGPR-TIIQKEPLDLRVA 226
Query: 405 PSN 407
PSN
Sbjct: 227 PSN 229
>sp|P32004|L1CAM_HUMAN Neural cell adhesion molecule L1 OS=Homo sapiens GN=L1CAM PE=1 SV=2
Length = 1257
Score = 196 bits (498), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 197/721 (27%), Positives = 305/721 (42%), Gaps = 80/721 (11%)
Query: 44 VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
VAL+ + + L CI G P P W + P+ P+DR++ N+ K+L + V D G Y
Sbjct: 253 VALQGQPLVLECIAEGFPTPTIKWLRPSGPM-PADRVTYQNHNKTLQLLKVGEEDDGEYR 311
Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
C N +G A+ ++ ++V AAPY+ +P+ ET +C+ G P+PE+ W NG
Sbjct: 312 CLAENSLGSAR-HAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 370
Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
P+ + + + ++ + + N++ SDT C A N G + + Y+ V+ +I
Sbjct: 371 IPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILT 430
Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
A Y V G T L C+ FGAP P V W+ L R+ G L I D+
Sbjct: 431 ADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQAN 490
Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
D+G Y C A N +L VK+ T IT P + G TF C A DPSL+ S
Sbjct: 491 DTGRYFCLAANDQNNVTIMANLKVKDATQITQGPRSTIEKKGSRVTFTCQASFDPSLQPS 550
Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTV 398
I W + +S+ F++ D L + D G Y+C A TELD +E++A L V
Sbjct: 551 ITWRGDGRDLQELGDSDKYFIE--DGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 608
Query: 399 -----QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIR 453
VP S+ L+ + VSW+P + Y ++ ++
Sbjct: 609 VGSPGPVPRLVLSDLHLLT---QSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWY 663
Query: 454 ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVPGTV----- 507
L G T+T + K P RV A N G PS + + VTPE P
Sbjct: 664 SLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVK 722
Query: 508 -QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
+ E + + L+W+ P + Y+++++ +GT+ GP E++ +SDP
Sbjct: 723 GEGNETTNMVITWKPLRWMDWNAPQ---VQYRVQWRP-QGTR-GPWQEQI--VSDPFLVV 775
Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPNNLVISWTAMP 626
+ + P Y I + G G E + + + D + A+P
Sbjct: 776 SNTSTFVP---YEIKVQAVNSQGKGPEPQ--VTIGYSGEDYPQ--------------AIP 816
Query: 627 EIEHNAPHFKYRIFWRRHNTGEAWNQDDVL-DWRQSELVLANQPTFQPYEIKVVQTWTE- 684
E+E E N VL WR +L + + Y V W E
Sbjct: 817 ELE----------------GIEILNSSAVLVKWRPVDLAQV-KGHLRGYN---VTYWREG 856
Query: 685 ---KDGEGSI-RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPE 740
K + I ++ +V +T+ + P S V AFNG +GP SE +F TPE
Sbjct: 857 SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGSGPASE-FTFSTPE 915
Query: 741 G 741
G
Sbjct: 916 G 916
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 175/696 (25%), Positives = 264/696 (37%), Gaps = 94/696 (13%)
Query: 53 LFCIFGGTPLPQTIWSKDGVPI-----NPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
L C G P P+ W +G+P+ + RI +G +LI+ +V+ SD CE
Sbjct: 352 LDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRG----ALILSNVQPSDTMVTQCEAR 407
Query: 108 N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
N G+ A +Y I + L A T + + A + T CKA G P P + W+ +G
Sbjct: 408 NRHGLLLANAY-IYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGT 466
Query: 165 PISQAP---PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
+ Q P +G I +L+ +DTG Y C A N V + N+ + A +
Sbjct: 467 TVLQDERFFPYANGTLG-----IRDLQANDTGRYFCLAANDQNNV--TIMANLKVKDATQ 519
Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWI---HNQKELTGGRYTILETGDLKIT 275
IT+ P+ G V TC+ P +P + W + +EL +E G L I
Sbjct: 520 ITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDGRDLQELGDSDKYFIEDGRLVIH 579
Query: 276 DVAFADSGEYTCFARNKLGTAQGSGSLT-----------VKEHTHITDQPEDYEVEAGQS 324
+ ++D G Y+C A +L + L V H+ Q + V S
Sbjct: 580 SLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQ---VRVSWS 636
Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF------VQSNDYSLTVTKSSELDSGQ 378
NA P K I E D E P V N S T+ S +
Sbjct: 637 PAEDHNA---PIEKYDI------EFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYV---H 684
Query: 379 YTCRAQTELDFIEAQ---ATLTVQVPLEAPSNFTLIQVIDAK-------KAVVSWNPVSP 428
YT R + + + TV P AP +D K V++W P+
Sbjct: 685 YTFRVTAINKYGPGEPSPVSETVVTPEAAPEK----NPVDVKGEGNETTNMVITWKPLRW 740
Query: 429 QSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYN 488
Y+VQ W + G +E IV+ + FVP +V A N
Sbjct: 741 MDWNAPQVQYRVQ-WRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYE---IKVQAVNSQGK 796
Query: 489 GPPSEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKIKY--QS 543
GP ++ + E P + LE I L SSA +KW V Q G L GY + Y +
Sbjct: 797 GPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGYNVTYWREG 856
Query: 544 VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFK 603
+ + + + TTS L+GL P + Y + + + G G S++ F P
Sbjct: 857 SQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGSGPASEFTFSTPEG 916
Query: 604 NPDNVEG---RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQ 660
P + E + +L++ W P + HN Y + + H E + R
Sbjct: 917 VPGHPEALHLECQSNTSLLLRW--QPPLSHNGVLTGYVLSY--HPLDEGGKGQLSFNLRD 972
Query: 661 SELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRE 693
EL N P Y ++ T E GE +RE
Sbjct: 973 PELRTHNLTDLSPHLRYRFQLQATTKEGPGEAIVRE 1008
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 161/389 (41%), Gaps = 34/389 (8%)
Query: 41 KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRIS----QGNYGKSLII--KHV 94
++ V + L C G P Q W++DGV P + + Q + S I +
Sbjct: 43 RRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSFTITGNNS 102
Query: 95 EFSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKA 149
F+ QG Y C SN +G A S+ I L AP + TV+P E E+V C
Sbjct: 103 NFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPV--EVEEGESVVLPCNP 160
Query: 150 SGLPEP-EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLG 204
EP I+W+++ I + R +G N + N+ SD +Y C+A +
Sbjct: 161 PPSAEPLRIYWMNSK--ILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 218
Query: 205 YVYKD-VYVNVLAHAPEITEAPKDEY---------TVDGKTVVLTCRVFGAPKPEVNWIH 254
+ K+ + + V A I P+ + + G+ +VL C G P P + W+
Sbjct: 219 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLR 278
Query: 255 NQKELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQ 313
+ R T L++ V D GEY C A N LG+A+ + +TV+ + +
Sbjct: 279 PSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHK 338
Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
P+ + G++A C P + + W P++ ++ + + +L ++
Sbjct: 339 PQSHLYGPGETARLDCQVQGRP--QPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQP 396
Query: 374 LDSGQYTCRAQTELDFIEAQATL-TVQVP 401
D+ C A+ + A A + VQ+P
Sbjct: 397 SDTMVTQCEARNRHGLLLANAYIYVVQLP 425
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 126/320 (39%), Gaps = 60/320 (18%)
Query: 122 VLAAPYFTVE-PEFINAAEEETVTFECKASGLPEPEIHWVHNG---KP-------ISQAP 170
V+ P T + P + + ++ +C+ASG PE + W +G KP + Q+P
Sbjct: 31 VMEPPVITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSP 90
Query: 171 PNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI-TEAPKDEY 229
+ + N N + G Y C A+N LG + AP+ E K
Sbjct: 91 HSGSFTITGNN---SNFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVE 147
Query: 230 TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL---TGGRYTILETGDLKITDVAFADS-GEY 285
+G++VVL C + +P + N K L R T+ + G+L +V +D+ +Y
Sbjct: 148 VEEGESVVLPCNPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDY 207
Query: 286 TCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEA------------------------ 321
C A G+ T+ I +P D V+A
Sbjct: 208 ICH-------AHFPGTRTI-----IQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVAL 255
Query: 322 -GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
GQ C A P+ +I WLR S P+ ++ Q+++ +L + K E D G+Y
Sbjct: 256 QGQPLVLECIAEGFPT--PTIKWLRPSGPM--PADRVTYQNHNKTLQLLKVGEEDDGEYR 311
Query: 381 CRAQTELDFIEAQATLTVQV 400
C A+ L +TV+
Sbjct: 312 CLAENSLGSARHAYYVTVEA 331
>sp|P14781|CNTN1_CHICK Contactin-1 OS=Gallus gallus GN=CNTN1 PE=1 SV=1
Length = 1010
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 193/742 (26%), Positives = 311/742 (41%), Gaps = 104/742 (14%)
Query: 26 ASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNY 85
A + + P V K AL + V L C G P+P+ WSK P+ + IS
Sbjct: 225 ADRAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELRWSKYLEPMPATAEISMS-- 282
Query: 86 GKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET--- 142
G L I ++++ D+G Y CE N G+ K + + V A+P + E IN E++
Sbjct: 283 GAVLKIFNIQYEDEGLYECEAENYKGKDK-HQARVYVQASPEWV---EHINDTEKDIGSD 338
Query: 143 VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202
+ + C A+G P P I W+ NG + + I+ L D G Y C A N+
Sbjct: 339 LYWPCVATGKPIPTIRWLKNGVSFRKG-----------ELRIQGLTFEDAGMYQCIAENA 387
Query: 203 LGYVYKDVYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT 260
G +Y + + ++A P E+ K G V++ C+ APKP+ +W + L
Sbjct: 388 HGIIYANAELKIVASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTELLV 447
Query: 261 -GGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEV 319
G R I + G L+I +V D G YTCFA N G A +G L + E T IT P + +V
Sbjct: 448 NGSRIHIWDDGSLEIINVTKLDEGRYTCFAENNRGKANSTGVLEMTEATRITLAPLNVDV 507
Query: 320 EAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN-----DYSLTVTKSSEL 374
G++AT +C A DP+L L+ +W IDFE E + N + L +
Sbjct: 508 TVGENATMQCIASHDPTLDLTFIWSLNGFVIDFEKEHEHYERNVMIKSNGELLIKNVQLR 567
Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVS 427
+G+YTC AQT +D A A L V+ P P + ++ D A ++W +P+S
Sbjct: 568 HAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGIRIEEIRDTAVA-LTWSRGTDNHSPIS 626
Query: 428 PQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
+++ + + + W + E S E G + V +P + R++A N
Sbjct: 627 KYTIQS--KTFLSEEWKDAKTEPSDIE-----GNMESARVIDLIPWMEYEFRIIATNTLG 679
Query: 488 NGPPSEIISFVTPEGVPGTVQSLEAIPLGSS--AFYLKW--VKPEQPNGVLMGYKIKYQS 543
G PS + EG P V + G S + W + E G GY + ++
Sbjct: 680 TGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNRELTITWMPLSREYHYGNNFGYIVAFKP 739
Query: 544 VKGTKVGPLLERLPYISDPTTTS--AKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFY- 599
G R +++P K + PST+Y++ + + GDG S + Y
Sbjct: 740 -----FGEKEWRRVTVTNPEIGRYVHKDESMPPSTQYQVKVKAFNSKGDGPFSLTAVIYS 794
Query: 600 ---VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVL 656
P + P +V + + + + +SW H+ E
Sbjct: 795 AQDAPTEVPTDVSVKVLSSSEISVSW---------------------HHVTEK------- 826
Query: 657 DWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 716
+ + Y+I+ W D E + + + V+ E +T+++ P ++
Sbjct: 827 -------------SVEGYQIRY---WAAHDKEAAAQRVQVSNQE-YSTKLENLKPNTRYH 869
Query: 717 ARVLAFNGAYNGPPSEIISFVT 738
V AFN A GPPS I +T
Sbjct: 870 IDVSAFNSAGYGPPSRTIDIIT 891
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 141/637 (22%), Positives = 258/637 (40%), Gaps = 92/637 (14%)
Query: 55 CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
C+ G P+P W K+GV + L I+ + F D G Y C N G
Sbjct: 343 CVATGKPIPTIRWLKNGVSFRKGE----------LRIQGLTFEDAGMYQCIAENAHGIIY 392
Query: 115 SYSIDLSVLAAP-YFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
+ + +L ++A+P F + P + I AA+ V ECK P+P+ W + +
Sbjct: 393 A-NAELKIVASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTELLVNGS- 450
Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
R + + + I N+ K D G Y C A N+ G V + A IT AP +
Sbjct: 451 --RIHIWDDGSLEIINVTKLDEGRYTCFAENNRGKA-NSTGVLEMTEATRITLAPLNVDV 507
Query: 231 VDGKTVVLTCRVFGAPKPEVNWI----------HNQKELTGGRYTILETGDLKITDVAFA 280
G+ + C P ++ +I + E I G+L I +V
Sbjct: 508 TVGENATMQCIASHDPTLDLTFIWSLNGFVIDFEKEHEHYERNVMIKSNGELLIKNVQLR 567
Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
+G YTC A+ + + S L V+ G R + D ++ L+
Sbjct: 568 HAGRYTCTAQTIVDNSSASADLVVRG-------------PPGPPGGIRIEEIRDTAVALT 614
Query: 341 IVWLRGSE---PID-FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ--- 393
W RG++ PI + + + S ++ T+ S+++ + R + ++E +
Sbjct: 615 --WSRGTDNHSPISKYTIQSKTFLSEEWKDAKTEPSDIEGNMESARVIDLIPWMEYEFRI 672
Query: 394 -ATLTV-----QVPLE------APSNFTLIQVIDA----KKAVVSWNPVSPQSLRGHFRG 437
AT T+ +P + AP N V ++ ++W P+S + G+ G
Sbjct: 673 IATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNRELTITWMPLSREYHYGNNFG 732
Query: 438 YKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFV-------PASKNFARVLAFNGAYNGP 490
Y V + GE R + V T E+ ++V P+++ +V AFN +GP
Sbjct: 733 YIVAF--KPFGEKEWRRVTV-----TNPEIGRYVHKDESMPPSTQYQVKVKAFNSKGDGP 785
Query: 491 PSEIISFVTPEGVPGTVQSLEAIP-LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
S + + P V + ++ L SS + W + + + GY+I+Y + +
Sbjct: 786 FSLTAVIYSAQDAPTEVPTDVSVKVLSSSEISVSWHHVTEKS--VEGYQIRYWAAHDKEA 843
Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVE 609
+R+ + +T KL L+P+T+Y I ++ + AG G S+ + + K P +
Sbjct: 844 AA--QRVQVSNQEYST--KLENLKPNTRYHIDVSAFNSAGYGPPSRTIDIITRKAPPSQR 899
Query: 610 GR----GSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
R + + +I+W + + + + Y++ +R
Sbjct: 900 PRIISSVRSGSRYIITWDHVKAMSNESAVEGYKVLYR 936
Score = 90.1 bits (222), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 131/322 (40%), Gaps = 41/322 (12%)
Query: 80 ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVL-AAPYFTVEPEFINAA 138
+SQ N +L I +VE SD+G+Y+C VS+ +S + ++ A V P I
Sbjct: 181 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPQADRAKVYPADIKVK 238
Query: 139 EEET-------VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSD 191
++T VT EC A G P PE+ W +P+ P + + I N++ D
Sbjct: 239 FKDTYALLGQNVTLECFALGNPVPELRWSKYLEPM---PATAEISMSGAVLKIFNIQYED 295
Query: 192 TGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVN 251
G Y C A N G V V A +PE E D G + C G P P +
Sbjct: 296 EGLYECEAENYKGKDKHQARVYVQA-SPEWVEHINDTEKDIGSDLYWPCVATGKPIPTIR 354
Query: 252 WIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHIT 311
W+ N G+L+I + F D+G Y C A N G + L I
Sbjct: 355 WLKNG--------VSFRKGELRIQGLTFEDAGMYQCIAENAHGIIYANAEL------KIV 400
Query: 312 DQPEDYEVE---------AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN 362
P +E+ G C + P K S W +G+E + S R +
Sbjct: 401 ASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTELLVNGS--RIHIWD 456
Query: 363 DYSLTVTKSSELDSGQYTCRAQ 384
D SL + ++LD G+YTC A+
Sbjct: 457 DGSLEIINVTKLDEGRYTCFAE 478
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 142/382 (37%), Gaps = 46/382 (12%)
Query: 50 KVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
+V + C P P W + I+ + DR S G L+I + E S D G Y C VS
Sbjct: 52 QVSMNCRARAVPFPTYKWKLNNWDIDLTKDRYSM--VGGRLVISNPEKSRDAGKYVCVVS 109
Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH--------W 159
N G +S LS F E + E V A L EP H W
Sbjct: 110 NIFGTVRSSEATLSFGYLDPFPPEEHY-----EVKVREGVGAVLLCEPPYHYPDDLSYRW 164
Query: 160 VHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA 218
+ N P+ A R N + I N+ SD GNY C ++ + K V+ +
Sbjct: 165 LLNEFPVFIALDRRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIPLI 222
Query: 219 PEITEAP----------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE 268
P+ A KD Y + G+ V L C G P PE+ W + + +
Sbjct: 223 PQADRAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELRWSKYLEPMPATAEISMS 282
Query: 269 TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
LKI ++ + D G Y C A N G + + V+ + D E + G +
Sbjct: 283 GAVLKIFNIQYEDEGLYECEAENYKGKDKHQARVYVQASPEWVEHINDTEKDIGSDLYWP 342
Query: 329 CNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD 388
C A P +I WL+ + F +Q + D+G Y C A+
Sbjct: 343 CVATGKPI--PTIRWLKNG--VSFRKGELRIQGLTFE---------DAGMYQCIAENAHG 389
Query: 389 FIEAQATLTVQVPLEAPSNFTL 410
I A A L + + +P F L
Sbjct: 390 IIYANAELKI---VASPPTFEL 408
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 110/293 (37%), Gaps = 31/293 (10%)
Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
P T+ PE + + V+ C+A +P P W N I R + R+ I
Sbjct: 39 PIDTIYPE---ESSDGQVSMNCRARAVPFPTYKWKLNNWDIDLT--KDRYSMVGGRLVIS 93
Query: 186 NLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV---DGKTVVLTCR 241
N KS D G Y C +N G V + P++ Y V +G VL C
Sbjct: 94 NPEKSRDAGKYVCVVSNIFGTVRSSEATLSFGYLDPF--PPEEHYEVKVREGVGAVLLCE 151
Query: 242 V-FGAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGT 295
+ P W+ N+ L R+ G+L I +V +D G Y+CF + T
Sbjct: 152 PPYHYPDDLSYRWLLNEFPVFIALDRRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSIT 211
Query: 296 AQGSGSLT--VKEHTHITDQPEDYEVE-------AGQSATFRCNAVSDPSLKLSIVWLRG 346
+ + P D +V+ GQ+ T C A+ +P +L W +
Sbjct: 212 KSVFSKFIPLIPQADRAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELR--WSKY 269
Query: 347 SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
EP+ +E + + L + D G Y C A+ + QA + VQ
Sbjct: 270 LEPMPATAE---ISMSGAVLKIFNIQYEDEGLYECEAENYKGKDKHQARVYVQ 319
>sp|Q7ZW34|CNTN5_DANRE Contactin-5 OS=Danio rerio GN=cntn5 PE=2 SV=1
Length = 1056
Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 165/604 (27%), Positives = 263/604 (43%), Gaps = 45/604 (7%)
Query: 44 VALRNKKVELFCIFGGTPLPQTIWSK--DGVPINPSDRISQGNYGKSLIIKHVEFSDQGS 101
+A + V L C G P+P W K +P R SQ L I +++ D GS
Sbjct: 269 LAAKGVTVRLECFALGNPVPTITWRKMSGNIPKKARLRKSQA----VLEIPNIQLEDSGS 324
Query: 102 YTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVH 161
Y C+ N G ++ L V P + E + +EC+A+G P P W+
Sbjct: 325 YECKAENTRG-GTAFRGHLQVYTLPQWISMINDTQLDSGEQLRWECRATGKPRPTYRWLR 383
Query: 162 NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEI 221
NG+P+S R ++ +TI L+++D+G Y C A N G +Y + +LA AP
Sbjct: 384 NGEPLST---QSRVEMVNGELTIHRLQQADSGMYQCIAENKYGAIYSSAELKILASAPMF 440
Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
P GK V L CR +PKP ++W N + L R +L L+I + + +
Sbjct: 441 NNNPVRLIATVGKDVSLECRPRASPKPRISWRKNDRRLQPSRRIMLLRNNTLRIINSSRS 500
Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
D G Y C A N+ G+A+ + L VKE + P EV G+S C DPSL +S
Sbjct: 501 DEGSYVCRAENQFGSAELTTVLLVKEPMRVELSPLRVEVTVGESVVLSCKVTHDPSLDVS 560
Query: 341 IVWLRGSEPIDFESEP---RFVQSNDYSLTVTKSSEL--DSGQYTCRAQTELDFIEAQAT 395
+WL ++P++ + + ++Q+ + + S L +G+Y CRAQT D + A+A
Sbjct: 561 FLWLLNNQPLNTQQDGGHFEYIQTQSSTADLMIRSILLKHAGKYGCRAQTSTDSVLAEAE 620
Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKD-GEGSI 452
L V+ P P +++ I A A +SW+ + H Y VQ + G ++
Sbjct: 621 LLVRGP-PGPPGVVIVEEITASTATLSWS----HGVDNHSPITTYNVQARSPVSLGWQTV 675
Query: 453 R---ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG---PPSEIISFVTPEGVPGT 506
+ + + ES VD P + RV+A N G PPS + T E VP
Sbjct: 676 KTDPDPVTGSMESAMA-VD-LNPWVEYEFRVVATNSIGTGDPSPPSRAVR--TKEAVPSV 731
Query: 507 V-QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 563
++ + W V E NG GY + ++ V GT+ E++ +D T
Sbjct: 732 APANVRGGNGRRHELVISWEPVSEEYQNGEGFGYIVAFR-VNGTR--GWKEKMVTSADST 788
Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNL 618
T + P T + + + Y GDG S+ + P + P V+ + + +
Sbjct: 789 TYKYRDETFPPLTPFEVRVGVYNNKGDGPFSEVVTVFSAEGEPREPPSEVQAFAVSSSEI 848
Query: 619 VISW 622
+ W
Sbjct: 849 KVLW 852
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 166/693 (23%), Positives = 260/693 (37%), Gaps = 106/693 (15%)
Query: 88 SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS----IDL---SVLAAPYFTVE---PEFINA 137
+L I V+ SD GSY C+V N V A+ S + L V+ +E P+ + A
Sbjct: 211 NLYIPKVQPSDVGSYVCQVKNTVTNARVLSPPTPLTLKTDGVMGEYEPKIEAHFPQTVLA 270
Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
A+ TV EC A G P P I W K P R + + I N++ D+G+Y C
Sbjct: 271 AKGVTVRLECFALGNPVPTITW---RKMSGNIPKKARLRKSQAVLEIPNIQLEDSGSYEC 327
Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK 257
A N+ G ++ V P+ D G+ + CR G P+P W+ N +
Sbjct: 328 KAENTRGGTAFRGHLQVYT-LPQWISMINDTQLDSGEQLRWECRATGKPRPTYRWLRNGE 386
Query: 258 ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI-TDQPED 316
L+ + G+L I + ADSG Y C A NK G S L + + + P
Sbjct: 387 PLSTQSRVEMVNGELTIHRLQQADSGMYQCIAENKYGAIYSSAELKILASAPMFNNNPVR 446
Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDS 376
G+ + C + P ++S W + + +++N +L + SS D
Sbjct: 447 LIATVGKDVSLECRPRASPKPRIS--WRKNDRRLQPSRRIMLLRNN--TLRIINSSRSDE 502
Query: 377 GQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVS-------------- 422
G Y CRA+ + E L V+ P+ + ++V + V+S
Sbjct: 503 GSYVCRAENQFGSAELTTVLLVKEPMRVELSPLRVEVTVGESVVLSCKVTHDPSLDVSFL 562
Query: 423 W----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK----GESTTTEVDKFVPAS 474
W P++ Q GHF + Q+ T + IR +++ G T D + +
Sbjct: 563 WLLNNQPLNTQQDGGHFEYIQTQSST---ADLMIRSILLKHAGKYGCRAQTSTDSVLAEA 619
Query: 475 KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
+ R GPP G PG V E + +S L W + +
Sbjct: 620 ELLVR---------GPP----------GPPGVVIVEE---ITASTATLSWSHGVDNHSPI 657
Query: 535 MGYKIKYQSVKGTKVGPLLERLPYISDPTT---TSAKLAGLEPSTKYRIHLAGYTKAGDG 591
Y ++ +S V + + DP T SA L P +Y + G G
Sbjct: 658 TTYNVQARS----PVSLGWQTVKTDPDPVTGSMESAMAVDLNPWVEYEFRVVATNSIGTG 713
Query: 592 AES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHN 645
S + VP P NV G + LVISW + E N F Y + +R +
Sbjct: 714 DPSPPSRAVRTKEAVPSVAPANVRGGNGRRHELVISWEPVSEEYQNGEGFGYIVAFRVNG 773
Query: 646 TGEAWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTT 703
T W + V + ++ P P+E++V + NKG+
Sbjct: 774 T-RGWKEKMVTSADSTTYKYRDETFPPLTPFEVRV--------------GVYNNKGDGPF 818
Query: 704 TEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 736
+EV V + G PPSE+ +F
Sbjct: 819 SEV----------VTVFSAEGEPREPPSEVQAF 841
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 165/659 (25%), Positives = 273/659 (41%), Gaps = 114/659 (17%)
Query: 55 CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
C G P P W ++G P++ R+ N L I ++ +D G Y C N G
Sbjct: 369 CRATGKPRPTYRWLRNGEPLSTQSRVEMVN--GELTIHRLQQADSGMYQCIAENKYGAIY 426
Query: 115 SYSIDLSVLA-APYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNP 173
S S +L +LA AP F P + A + V+ EC+ P+P I W N + + P
Sbjct: 427 S-SAELKILASAPMFNNNPVRLIATVGKDVSLECRPRASPKPRISWRKNDRRL-----QP 480
Query: 174 RRKV---GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE-APKDEY 229
R++ N + I N +SD G+Y C A N G ++ +L P E +P
Sbjct: 481 SRRIMLLRNNTLRIINSSRSDEGSYVCRAENQFGSA--ELTTVLLVKEPMRVELSPLRVE 538
Query: 230 TVDGKTVVLTCRVFGAPKPEVN--WIHNQKELT----GGRYTILET----GDLKITDVAF 279
G++VVL+C+V P +V+ W+ N + L GG + ++T DL I +
Sbjct: 539 VTVGESVVLSCKVTHDPSLDVSFLWLLNNQPLNTQQDGGHFEYIQTQSSTADLMIRSILL 598
Query: 280 ADSGEYTCFARNK----------------------------LGTAQGSGSLTVKEHTHIT 311
+G+Y C A+ TA S S V H+ IT
Sbjct: 599 KHAGKYGCRAQTSTDSVLAEAELLVRGPPGPPGVVIVEEITASTATLSWSHGVDNHSPIT 658
Query: 312 DQPEDYEVEAGQSATFRCNAV-SDPSLKLSIVWLRGSEPIDFESEPRF-VQSN---DYSL 366
Y V+A + V +DP +P+ E V N +Y
Sbjct: 659 T----YNVQARSPVSLGWQTVKTDP------------DPVTGSMESAMAVDLNPWVEYEF 702
Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ-VPLEAPSNFTLIQVIDAKK--AVVSW 423
V ++ + +G + ++A T + VP AP+N ++ + ++ V+SW
Sbjct: 703 RVVATNSIGTGDPSP---------PSRAVRTKEAVPSVAPAN---VRGGNGRRHELVISW 750
Query: 424 NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEV--DKFVPASKNFARVL 481
PVS + G GY V +G +E +V +STT + + F P + RV
Sbjct: 751 EPVSEEYQNGEGFGYIVAF--RVNGTRGWKEKMVTSADSTTYKYRDETFPPLTPFEVRVG 808
Query: 482 AFNGAYNGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
+N +GP SE+++ + EG P S ++A + SS + W P G GY++
Sbjct: 809 VYNNKGDGPFSEVVTVFSAEGEPREPPSEVQAFAVSSSEIKVLWKPPSPGLGRPQGYEVS 868
Query: 541 Y-QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY 599
+ + V+ ++G L T+ L+GL+ +T+Y + + G+ AG G S +
Sbjct: 869 FWKDVEQEELGKKKRTLG-----NETNMLLSGLDGNTQYLVSVKGFNSAGQGPSSTAVKI 923
Query: 600 VPFKN-----PDNV----EGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEA 649
KN P N+ EG NN+ +SW + ++ + Y++ R+ G +
Sbjct: 924 STKKNAPSLPPGNLMWIQEG-----NNVSLSWDPVKARDNESEVIGYKVLLRQEGRGHS 977
Score = 96.3 bits (238), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 139/372 (37%), Gaps = 33/372 (8%)
Query: 48 NKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEV 106
+KK+ + C G P+P W +G ++ +LII + E D G Y C
Sbjct: 74 DKKIIMNCEARGNPVPTYSWLINGTNVDTEADFRYSLIDGNLIIHNASEVIDYGRYQCRA 133
Query: 107 SNGVGEAKSYSIDLS-VLAAPYFTVEPEFINAAEEETVTFECK-ASGLPEPEIHWVHNGK 164
N +G S L P+ ++ E + V C S PE WV N
Sbjct: 134 ENSIGIVLSRDALLQFAYLGPFSGKTRGAVSVREGQGVVLMCAPPSHSPEIIYSWVFNEL 193
Query: 165 PISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------V 206
P S + RR + + I ++ SD G+Y C N++ V
Sbjct: 194 P-SFVAEDSRRFISQETGNLYIPKVQPSDVGSYVCQVKNTVTNARVLSPPTPLTLKTDGV 252
Query: 207 YKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
+ + AH P+ A K G TV L C G P P + W +
Sbjct: 253 MGEYEPKIEAHFPQTVLAAK------GVTVRLECFALGNPVPTITWRKMSGNIPKKARLR 306
Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
L+I ++ DSG Y C A N G G L V D ++++G+
Sbjct: 307 KSQAVLEIPNIQLEDSGSYECKAENTRGGTAFRGHLQVYTLPQWISMINDTQLDSGEQLR 366
Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
+ C A P + + WLR EP+ +S V LT+ + + DSG Y C A+ +
Sbjct: 367 WECRATGKP--RPTYRWLRNGEPLSTQSRVEMVNGE---LTIHRLQQADSGMYQCIAENK 421
Query: 387 LDFIEAQATLTV 398
I + A L +
Sbjct: 422 YGAIYSSAELKI 433
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 114/284 (40%), Gaps = 33/284 (11%)
Query: 125 APYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
P F EP+ F ++++ + C+A G P P W+ NG + + N
Sbjct: 56 GPVFIQEPDDAIFSLDSDDKKIIMNCEARGNPVPTYSWLINGTNVDTEADFRYSLIDGNL 115
Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTC 240
I D G Y C A NS+G V + A+ + + +V +G+ VVL C
Sbjct: 116 IIHNASEVIDYGRYQCRAENSIGIVLSRDALLQFAYLGPFSGKTRGAVSVREGQGVVLMC 175
Query: 241 RVFGAP---KPEV--NWIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCFARN 291
AP PE+ +W+ N+ R+ ETG+L I V +D G Y C +N
Sbjct: 176 ----APPSHSPEIIYSWVFNELPSFVAEDSRRFISQETGNLYIPKVQPSDVGSYVCQVKN 231
Query: 292 KLGTAQGSG---SLTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSLKLS 340
+ A+ LT+K + + P+ G + C A+ +P +
Sbjct: 232 TVTNARVLSPPTPLTLKTDGVMGEYEPKIEAHFPQTVLAAKGVTVRLECFALGNPV--PT 289
Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
I W + S I ++ R Q+ L + DSG Y C+A+
Sbjct: 290 ITWRKMSGNIPKKARLRKSQA---VLEIPNIQLEDSGSYECKAE 330
>sp|O94779|CNTN5_HUMAN Contactin-5 OS=Homo sapiens GN=CNTN5 PE=2 SV=2
Length = 1100
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 164/611 (26%), Positives = 263/611 (43%), Gaps = 49/611 (8%)
Query: 45 ALRNKKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
A + V++ C G P+P W K +P R SQ L I +V+ D G Y
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQA----VLEIPNVQLDDAGIY 367
Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
C N G+ S+ L V P++ + + +ECKA+G P P W+ N
Sbjct: 368 ECRAENSRGK-NSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKN 426
Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--E 220
G P+S P R ++ + I N+ +SD G Y C A N G +Y + +LA AP
Sbjct: 427 GVPLS---PQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFA 483
Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
+ + K + VV+ C+ G+PKP ++W + + R IL G L+I + +
Sbjct: 484 LNQLKKTIIVTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASK 543
Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
+D G+Y C N G+A+ SL+VKE T I P+ E+ G+S C A+ D SL +
Sbjct: 544 SDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 603
Query: 340 SIVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
+ W +PIDFE E Q++ L + + +G+Y CR QT D + +A
Sbjct: 604 TFYWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEA 663
Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKD 447
L V+ P P +++ I A +SW+P + Y +Q W
Sbjct: 664 ELLVRGP-PGPPGIVIVEEITESTATLSWSPAADN--HSPISSYNLQARSPFSLGWQTVK 720
Query: 448 GEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGT 506
++ E+I ES VD P + RV+A N G PS + T E VP T
Sbjct: 721 ---TVPEIITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKT 775
Query: 507 VQSLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISD 561
+ + G + W V E NG GY + ++ +G K E++ S+
Sbjct: 776 APTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSE 830
Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPN 616
+ + + P T + + + Y GDG S+ + P P +V+ + +
Sbjct: 831 ASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVS 890
Query: 617 NLVISWTAMPE 627
++++W + E
Sbjct: 891 EILVAWKHIKE 901
Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 160/650 (24%), Positives = 241/650 (37%), Gaps = 76/650 (11%)
Query: 88 SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INA 137
+L I V+ SD GSY C V N V A+ S + V+ +E F + A
Sbjct: 253 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 312
Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
A+ TV EC A G P P I W+ NG P R + + I N++ D G Y
Sbjct: 313 AKGTTVKMECFALGNPVPTITWMKVNG----YIPSKARLRKSQAVLEIPNVQLDDAGIYE 368
Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
C A NS G + V + P E D G + C+ G P+P W+ N
Sbjct: 369 CRAENSRGKNSFRGQLQVYTY-PHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG 427
Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT---HITDQ 313
L+ + G L I +V +D+G Y C A NK G S L + +
Sbjct: 428 VPLSPQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQL 487
Query: 314 PEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
+ V Q C P K +I W +G + R D SL + +S+
Sbjct: 488 KKTIIVTKDQEVVIECKPQGSP--KPTISWKKGDRAV--RENKRIAILPDGSLRILNASK 543
Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI----------QVIDAKKAV 420
D G+Y CR + E A+L+V+ P P L + DA V
Sbjct: 544 SDEGKYVCRGENVFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDV 603
Query: 421 VSW-----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASK 475
+ P+ + GHF + Q + IR +++ V +
Sbjct: 604 TFYWTLKGQPIDFEEEGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQTTADSVS 660
Query: 476 NFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLM 535
+ A +L GPP G PG V E + S L W + +
Sbjct: 661 DEAELLV-----RGPP----------GPPGIVIVEE---ITESTATLSWSPAADNHSPIS 702
Query: 536 GYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
Y ++ +S +G ++ +P I SA L P +Y + G G S
Sbjct: 703 SYNLQARS--PFSLGWQTVKTVPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPS 760
Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
+ VP P NV GR + LVI+W + E N F Y + +R + T
Sbjct: 761 TPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT-R 819
Query: 649 AWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV 696
W + V S+ + ++ P P+E+K V + K G+G +++V
Sbjct: 820 GWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVV 867
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 149/394 (37%), Gaps = 39/394 (9%)
Query: 49 KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
KKV L C G P+P W ++G I+ SD G +I E D G Y C +
Sbjct: 117 KKVALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLAT 176
Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
N VG S L F+ ++ E + V C PE WV N P
Sbjct: 177 NTVGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 236
Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
S + RR + + I ++ SD G+Y C N++ V
Sbjct: 237 -SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVM 295
Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
+ + H P A K G TV + C G P P + W+ +
Sbjct: 296 GEYEPKIEVHFPFTVTAAK------GTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK 349
Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
L+I +V D+G Y C A N G G L V + H ++ D ++++G +
Sbjct: 350 SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRW 409
Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
C A P + + WL+ P+ +S V L + ++ D+G Y C A+ +
Sbjct: 410 ECKATGKP--RPTYRWLKNGVPLSPQSRVEMVNG---VLMIHNVNQSDAGMYQCLAENKY 464
Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
I A A L + L + F L Q+ KK ++
Sbjct: 465 GAIYASAELKI---LASAPTFALNQL---KKTII 492
Score = 69.7 bits (169), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 125/297 (42%), Gaps = 35/297 (11%)
Query: 113 AKSYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
+ ++ D SV P F EP+ F ++E+ V C+ G P P W+ NG I
Sbjct: 86 SDAFKQDESVDYGPVFVQEPDDIIFPTDSDEKKVALNCEVRGNPVPSYRWLRNGTEI-DL 144
Query: 170 PPNPRRKVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
+ R + I N ++ D+G+Y C ATN++G + A+ + +
Sbjct: 145 ESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNTVGSILSREATLQFAYLGNFSGRTRSA 204
Query: 229 YTV-DGKTVVLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVA 278
+V +G+ VVL C +P P +W+ N+ R+ ETG+L I+ V
Sbjct: 205 VSVREGQGVVLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQ 260
Query: 279 FADSGEYTCFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATF 327
+D G Y C +N + A+ LT++ + + EV G +
Sbjct: 261 TSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKM 320
Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
C A+ +P +I W++ + I ++ R Q+ L + D+G Y CRA+
Sbjct: 321 ECFALGNPV--PTITWMKVNGYIPSKARLRKSQA---VLEIPNVQLDDAGIYECRAE 372
Score = 46.2 bits (108), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 9/165 (5%)
Query: 40 RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
+K + ++++V + C G+P P W K + + RI+ G SL I + SD+
Sbjct: 488 KKTIIVTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDG-SLRILNASKSDE 546
Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEI 157
G Y C N G A+ + LSV + P+ E++ CKA +
Sbjct: 547 GKYVCRGENVFGSAEIIA-SLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 605
Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
+W G+PI + R + + I N+ G YGC
Sbjct: 606 YWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGC 650
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 82/199 (41%), Gaps = 15/199 (7%)
Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
P AP++ V + +V+W + +SL G +G++V W + + E + E + +G
Sbjct: 875 PSAAPTDVKATSV-SVSEILVAWKHIK-ESL-GRPQGFEVGYWKDMEQEDTA-ETVKTRG 930
Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
+ + + V A+NGA GPPS +S T + P S S
Sbjct: 931 NESFVILTGLEGNTLYHFTVRAYNGAGYGPPSSEVSATTKKSPPSQAPSNLRWEQQGSQV 990
Query: 521 YLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKY 578
L W V P ++GYK+ Y+ +G ++E T + L + Y
Sbjct: 991 SLGWEPVIPLANESEVVGYKVFYRQ-EGHSNSQVIE--------TQKLQAVVPLPDAGVY 1041
Query: 579 RIHLAGYTKAGDGAESKYL 597
I + Y++ GDG S +
Sbjct: 1042 IIEVRAYSEGGDGTASSQI 1060
>sp|Q98902|L1CAM_TAKRU Neural cell adhesion molecule L1 OS=Takifugu rubripes GN=l1cam PE=3
SV=1
Length = 1277
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 188/716 (26%), Positives = 299/716 (41%), Gaps = 73/716 (10%)
Query: 45 ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
ALR + +EL CI G P P+ W + ++ S RIS+ + + L ++ SD G Y C
Sbjct: 270 ALRGQTLELECIVQGLPTPKVSWLRKDGEMSES-RISKDMFDRRLQFTNISESDGGEYQC 328
Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
N G ++ ++V A+PY+T P A ETV +C+A G+P P I W NG
Sbjct: 329 TAENVQGRT-FHTYTVTVEASPYWTNAPVSQLYAPGETVKLDCQADGIPSPTITWTVNGV 387
Query: 165 PISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
P+S PRR + + + ++++ DT Y C A+N G + + V V+ P+I
Sbjct: 388 PLSATSLEPRRSLTESGSLILKDVIFGDTAIYQCQASNKHGTILANTNVYVIELPPQILT 447
Query: 224 APKDEYT-VDGKTVVLTCRVFGAPKPEVNWIHNQKEL--TGGRYTILETGDLKITDVAFA 280
+ YT V+G+ +L C FG+PKP+V W + L R +L G L+I +V+
Sbjct: 448 ENGNTYTFVEGQKALLECETFGSPKPKVTWESSSISLLLADPRVNLLTNGGLEIANVSHD 507
Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
D G YTC + + + V T I P+ ++ G++A F C V+DP L
Sbjct: 508 DEGIYTCLVQG--SNISVNAEVEVLNRTVILSPPQALRLQPGKTAIFTCLYVTDPKLSSP 565
Query: 341 IVWLRGSEPIDFESEPRFVQSNDY-SLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
++ R ++ FES + D L ++ D G YTC+ T+LD +EA +TLT+
Sbjct: 566 LLQWRKNDQKIFESHSDKKYTFDGPGLIISNVEPGDEGVYTCQIITKLDMVEASSTLTL- 624
Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
+ P +QV +AK VV+ N Y V+ + E EL
Sbjct: 625 --CDRPDPPVHLQVTNAKHRVVTLNWTPGDDNNSPILEYVVEFEDQDMKENGWEELKRVA 682
Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-----TPEGVPGTVQSLEAIP 514
+ + + S F RV+A N PS++ P+ P V+S P
Sbjct: 683 ADKKHVNLPLWPYMSYRF-RVIAINDQGKSDPSKLSDLYKTPADAPDSNPEDVRSESTDP 741
Query: 515 LGSSAFYLKWVKPEQPN--GVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGL 572
+ W + ++ N G Y + ++ V G+ GP I+ P + +
Sbjct: 742 ---DTLVITWEEMDKRNFNGPDFKYLVMWRRVVGS--GPDWHEEYTIAPPFI----VTDV 792
Query: 573 EPSTKYRIHLAGYTKAGDGAESKYLF-----YVPFKNPDNVEGRGSTPNNLVISWTAMPE 627
+ + + I + K G G E + VP + P N+ + ++W+A+ +
Sbjct: 793 QNFSAFEIKVQAVNKKGLGPEPDPIIGYSGEDVPLEAPLNLGVLLENSTTIRVTWSAVDK 852
Query: 628 IEHNAPHFKYRIF--WRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEK 685
Y+I+ W H A +P I +VQT
Sbjct: 853 ETVRGHLLGYKIYLTWGHHRNSRAQ---------------------EPENIVMVQT---- 887
Query: 686 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
G ++ I N P + AFN GP SE SF+TPEG
Sbjct: 888 -GANEEKKSITN-----------LRPYCHYDLAISAFNSKGEGPLSEKTSFMTPEG 931
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 129/282 (45%), Gaps = 25/282 (8%)
Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ-TW-TEKDGEGSIRELIV 457
VPLEAP N ++ + ++ V+W+ V +++RGH GYK+ TW ++ E IV
Sbjct: 825 VPLEAPLNLGVL-LENSTTIRVTWSAVDKETVRGHLLGYKIYLTWGHHRNSRAQEPENIV 883
Query: 458 NKGESTTTE---VDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP 514
E + P + AFN GP SE SF+TPEGVPG S++
Sbjct: 884 MVQTGANEEKKSITNLRPYCHYDLAISAFNSKGEGPLSEKTSFMTPEGVPGPPMSMQMTS 943
Query: 515 LGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
S L W P +PNG+L+GY ++Y+ ++ PL ++ I+ P T L GL+
Sbjct: 944 PSESEITLHWTPPSKPNGILLGYSLQYRKMQSDD-NPL--QVVDIASPEITHLTLKGLDR 1000
Query: 575 STKYRIHLAGYTKAGDGAESKYLFYVPFKN--PDNVEGRGSTPNNLVISWTAMPEIEHNA 632
+ Y+ L T AG G + L + P N+ + ++ +SW A H
Sbjct: 1001 HSHYQFLLMARTAAGKGLSIEILGATTLEGLPPANI-SLSAEERSVNLSWEA--RKRHRT 1057
Query: 633 PHFKYRIFWRR--HNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
F+ F + N G+ W+++E+V ++ FQ
Sbjct: 1058 VGFQIHYFSKNGTKNGGK---------WKKTEMVNSSLQFFQ 1090
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 165/394 (41%), Gaps = 40/394 (10%)
Query: 53 LFCIFGGTPLPQTIWSKDGVPINPSD----RISQGNYGKSLIIKHVEFSD-----QGSYT 103
+ C G P P W+KDG +PS ++++ G S+ D QG Y
Sbjct: 70 MRCEASGNPSPTFHWTKDGEEFDPSSDPEMKVTE-EAGSSVFYTLSNTMDTLKQYQGKYI 128
Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEE-ETVTFECK-ASGLPEPEIHWVH 161
C SN +G A S + L + A P E + AE ++ C +P IHW+
Sbjct: 129 CYASNELGTAVSNAAVLMIDAPPVQQKEKKVTEKAEAGHSIALSCNPPQSSMQPIIHWMD 188
Query: 162 NGKPISQAPPNPRRKVGPN-RITIENLRKSDTGN-YGCN----ATNSLGYVYKDVYVNV- 214
N + + R VG + + NL D+ N Y CN AT ++ + + + V
Sbjct: 189 NR--LRHIRLSDRVMVGKDGNLYFANLLTEDSRNDYTCNIQYLATRTI-LAKEPITLTVN 245
Query: 215 ------LAHAPEI---TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
P++ T + + + G+T+ L C V G P P+V+W+ E++ R +
Sbjct: 246 PSNLVPRNRRPQMMRPTGSHSTYHALRGQTLELECIVQGLPTPKVSWLRKDGEMSESRIS 305
Query: 266 I-LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
+ L+ T+++ +D GEY C A N G + ++TV+ + T+ P G++
Sbjct: 306 KDMFDRRLQFTNISESDGGEYQCTAENVQGRTFHTYTVTVEASPYWTNAPVSQLYAPGET 365
Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFES-EPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
C A PS +I W P+ S EPR + SL + D+ Y C+A
Sbjct: 366 VKLDCQADGIPS--PTITWTVNGVPLSATSLEPRRSLTESGSLILKDVIFGDTAIYQCQA 423
Query: 384 QTELDFIEAQATLTV-----QVPLEAPSNFTLIQ 412
+ I A + V Q+ E + +T ++
Sbjct: 424 SNKHGTILANTNVYVIELPPQILTENGNTYTFVE 457
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 122/299 (40%), Gaps = 40/299 (13%)
Query: 116 YSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
Y DL + P T +PE + E + C+ASG P P HW +G+ + +P
Sbjct: 43 YISDLKI--PPAITTQPESVTVFSVEDLVMRCEASGNPSPTFHWTKDGEEFDPS-SDPEM 99
Query: 176 KVGPN---------RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
KV T++ L++ G Y C A+N LG + V ++ AP + + K
Sbjct: 100 KVTEEAGSSVFYTLSNTMDTLKQYQ-GKYICYASNELGTAVSNAAV-LMIDAPPVQQKEK 157
Query: 227 D--EYTVDGKTVVLTCR-VFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFAD 281
E G ++ L+C + +P ++W+ N+ R + + G+L ++ D
Sbjct: 158 KVTEKAEAGHSIALSCNPPQSSMQPIIHWMDNRLRHIRLSDRVMVGKDGNLYFANLLTED 217
Query: 282 S-GEYTC---FARNKLGTAQGSGSLTVKEHTHI-----------TDQPEDYEVEAGQSAT 326
S +YTC + + A+ +LTV + T Y GQ+
Sbjct: 218 SRNDYTCNIQYLATRTILAKEPITLTVNPSNLVPRNRRPQMMRPTGSHSTYHALRGQTLE 277
Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSN-DYSLTVTKSSELDSGQYTCRAQ 384
C P+ K+S WLR + SE R + D L T SE D G+Y C A+
Sbjct: 278 LECIVQGLPTPKVS--WLRKDGEM---SESRISKDMFDRRLQFTNISESDGGEYQCTAE 331
>sp|P97527|CNTN5_RAT Contactin-5 OS=Rattus norvegicus GN=Cntn5 PE=1 SV=1
Length = 1099
Score = 186 bits (473), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 162/611 (26%), Positives = 258/611 (42%), Gaps = 49/611 (8%)
Query: 45 ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
A + V++ C G P+P W K I R+ + L I +++ D G Y C
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRKSQ--AVLEIPNLQLDDAGIYEC 369
Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
N G+ S+ L + P++ + + +ECKA+G P P W+ NG
Sbjct: 370 TAENSRGK-NSFRGQLQIYTYPHWVQKLNDTQLDSGSPLQWECKATGKPRPTYRWLKNGA 428
Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--EIT 222
P+ P R + I ++ +SD G Y C A N G +Y + +LA P E+
Sbjct: 429 PLL---PQSRVDTANGVLAIHSVNQSDAGMYQCLAENKYGAIYASAELKILASPPSFELN 485
Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFAD 281
+ K + V++ C+ G+PKP ++W K + G R IL G L+I + + AD
Sbjct: 486 QVKKSIIVTKDREVLIECKPQGSPKPAISWRKGDKAVRGNKRIAILPDGSLRILNASKAD 545
Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
G+Y C N G+A+ S++VKE T I P+ E+ G+S C A+ D SL ++
Sbjct: 546 EGKYICQGVNIFGSAEIIASVSVKEPTRIELTPKRTELTVGESIVLNCKAMHDSSLDVTF 605
Query: 342 VWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
W +PIDFE E Q++ L + + +G+Y CR QT D + +A L
Sbjct: 606 YWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAEL 665
Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKDGE 449
V+ P P +++ I A +SW+P + Y +Q W
Sbjct: 666 LVRGP-PGPPGVVIVEEITESTATLSWSPATDN--HSPISSYNLQARSPFSLGWQTVK-- 720
Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQ 508
++ E+I ES VD P + RV+A N G PS + T E VP T
Sbjct: 721 -TVPEVITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSIPSRMIRTNEAVPKTAP 777
Query: 509 SLEAIPLGSS---AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISD 561
S + GS + W V E NG GY + ++ +G K E++ SD
Sbjct: 778 S--NVSGGSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSD 830
Query: 562 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPN 616
+ + + P T + + + Y GDG S+ + P P +V + +
Sbjct: 831 ASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPTAAPTDVTATSVSVS 890
Query: 617 NLVISWTAMPE 627
+ + W + E
Sbjct: 891 EIFVVWKHVKE 901
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 158/669 (23%), Positives = 239/669 (35%), Gaps = 91/669 (13%)
Query: 89 LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
L I V+ SD GSY C V N V A+ S + P V P + AA
Sbjct: 254 LYISKVQTSDVGSYICLVKNAVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPTTVTAA 313
Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
+ TV EC A G P P I W+ NG P R + + I NL+ D G Y C
Sbjct: 314 KGTTVKMECFALGNPVPTITWMKVNG----YIPSKSRLRKSQAVLEIPNLQLDDAGIYEC 369
Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK 257
A NS G + + + P + D G + C+ G P+P W+ N
Sbjct: 370 TAENSRGKNSFRGQLQIYTY-PHWVQKLNDTQLDSGSPLQWECKATGKPRPTYRWLKNGA 428
Query: 258 ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDY 317
L G L I V +D+G Y C A NK G S L I P +
Sbjct: 429 PLLPQSRVDTANGVLAIHSVNQSDAGMYQCLAENKYGAIYASAEL------KILASPPSF 482
Query: 318 E---------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
E V + C P K +I W +G + + R D SL +
Sbjct: 483 ELNQVKKSIIVTKDREVLIECKPQGSP--KPAISWRKGDKAV--RGNKRIAILPDGSLRI 538
Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
+S+ D G+Y C+ E A+++V+ P ++ + V++ +
Sbjct: 539 LNASKADEGKYICQGVNIFGSAEIIASVSVKEPTRIELTPKRTELTVGESIVLNCKAMHD 598
Query: 429 QSLR------------------GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKF 470
SL GHF + Q + IR +++ V
Sbjct: 599 SSLDVTFYWTLKGQPIDFEKEGGHFESIRAQA---SSADLMIRNILLMHAGRYGCRVQTT 655
Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
+ + A +L GPP G PG V E + S L W
Sbjct: 656 ADSVSDEAELLV-----RGPP----------GPPGVVIVEE---ITESTATLSWSPATDN 697
Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
+ + Y ++ +S +G ++ +P + SA L P +Y + G
Sbjct: 698 HSPISSYNLQARS--PFSLGWQTVKTVPEVITGDMESAMAVDLNPWVEYEFRVVATNPIG 755
Query: 590 DGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
G S + VP P NV G + LVI+W + E N F Y + +R
Sbjct: 756 TGDPSIPSRMIRTNEAVPKTAPSNVSGGSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRP 815
Query: 644 HNTGEAWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV---NK 698
+ T W + V S+ + ++ P P+E+K V + K G+G +++V +
Sbjct: 816 NGT-RGWKEKMVTSSDASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVVICSAE 872
Query: 699 GESTTTEVD 707
GE T D
Sbjct: 873 GEPTAAPTD 881
Score = 90.5 bits (223), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 150/394 (38%), Gaps = 39/394 (9%)
Query: 49 KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKH-VEFSDQGSYTCEVS 107
KKV L C G P P W ++G I+ + II + E D G Y C +
Sbjct: 117 KKVALNCEVRGNPSPTYRWLRNGTEIDLESDYRYSMIDGTFIINNPSESRDSGLYQCLAT 176
Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
N G S L F+ ++ E + V C PE WV N P
Sbjct: 177 NTFGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 236
Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
S + RR + + I ++ SD G+Y C N++ V
Sbjct: 237 -SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAVTNARVLSPPTPLTLRNDGVM 295
Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
+ + H P A K G TV + C G P P + W+ +
Sbjct: 296 GEYEPKIEVHFPTTVTAAK------GTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRK 349
Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
L+I ++ D+G Y C A N G G L + + H + D ++++G +
Sbjct: 350 SQAVLEIPNLQLDDAGIYECTAENSRGKNSFRGQLQIYTYPHWVQKLNDTQLDSGSPLQW 409
Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
C A P + + WL+ P+ +S V + + L + ++ D+G Y C A+ +
Sbjct: 410 ECKATGKP--RPTYRWLKNGAPLLPQSR---VDTANGVLAIHSVNQSDAGMYQCLAENKY 464
Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
I A A L + L +P +F L QV KK+++
Sbjct: 465 GAIYASAELKI---LASPPSFELNQV---KKSII 492
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 121/295 (41%), Gaps = 35/295 (11%)
Query: 115 SYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
++ D SV P F EP+ F ++E+ V C+ G P P W+ NG I
Sbjct: 88 AFRQDESVDYGPVFVQEPDDIIFPTDSDEKKVALNCEVRGNPSPTYRWLRNGTEI-DLES 146
Query: 172 NPRRKVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
+ R + I N +S D+G Y C ATN+ G + A+ + + +
Sbjct: 147 DYRYSMIDGTFIINNPSESRDSGLYQCLATNTFGSILSREATLQFAYLGNFSGRTRSAVS 206
Query: 231 V-DGKTVVLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVAFA 280
V +G+ VVL C +P P +W+ N+ R+ ETG+L I+ V +
Sbjct: 207 VREGQGVVLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTS 262
Query: 281 DSGEYTCFARNKLGTAQ---GSGSLTVKEHTHITDQPEDYEVE--------AGQSATFRC 329
D G Y C +N + A+ LT++ + + EV G + C
Sbjct: 263 DVGSYICLVKNAVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPTTVTAAKGTTVKMEC 322
Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
A+ +P +I W++ + I +S R Q+ L + D+G Y C A+
Sbjct: 323 FALGNPV--PTITWMKVNGYIPSKSRLRKSQA---VLEIPNLQLDDAGIYECTAE 372
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 9/165 (5%)
Query: 40 RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
+K + ++++V + C G+P P W K + + RI+ G SL I + +D+
Sbjct: 488 KKSIIVTKDREVLIECKPQGSPKPAISWRKGDKAVRGNKRIAILPDG-SLRILNASKADE 546
Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEI-- 157
G Y C+ N G A+ + +SV + P+ E++ CKA ++
Sbjct: 547 GKYICQGVNIFGSAEIIA-SVSVKEPTRIELTPKRTELTVGESIVLNCKAMHDSSLDVTF 605
Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
+W G+PI + R + + I N+ G YGC
Sbjct: 606 YWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILLMHAGRYGC 650
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
P AP++ T V + V W V +SL G +G+++ W + + E S E + +G
Sbjct: 875 PTAAPTDVTATSV-SVSEIFVVWKHVK-ESL-GRPQGFEIGYWKDTEPEDSA-ETVRTRG 930
Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT----PEGVPGTVQSLEAIPLG 516
+ + + V A+NGA GPPS +S T P PG ++ +
Sbjct: 931 NESFVMLTGLEGDTLYHLTVRAYNGAGYGPPSREVSATTKRHPPSEPPGNLRWEQQ---- 986
Query: 517 SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
S L W V+P +MGYK+ Y+ +G G ++E T + L
Sbjct: 987 GSQVSLGWEPVRPLANESEVMGYKVFYRQ-EGHSKGQVIE--------TQKPQAVVPLPE 1037
Query: 575 STKYRIHLAGYTKAGDGAESKYL 597
+ Y I + Y++ GDG S +
Sbjct: 1038 AGVYIIEVRAYSEGGDGTASSQI 1060
>sp|Q05695|L1CAM_RAT Neural cell adhesion molecule L1 OS=Rattus norvegicus GN=L1cam PE=2
SV=3
Length = 1259
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 140/469 (29%), Positives = 211/469 (44%), Gaps = 15/469 (3%)
Query: 44 VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
VAL+ + + L CI G P P W P+ P+DR+ N+ K+L + +V D G YT
Sbjct: 252 VALQGQSLILECIAEGFPTPTIKWLHPSDPM-PTDRVIYQNHNKTLQLLNVGEEDDGEYT 310
Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
C N +G A+ ++ ++V AAPY+ +P+ ET +C+ G P+PE+ W NG
Sbjct: 311 CLAENSLGSAR-HAYYVTVEAAPYWLQKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 369
Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
I + + + ++ + + N++ SDT C A N G + + Y+ V+ I
Sbjct: 370 MSIEKVNKDQKYRIEQGSLILSNVQPSDTMVTQCEARNQHGLLLANAYIYVVQLPARILT 429
Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
Y V+G T L C+ FGAP P V W+ + L R+ G L I D+
Sbjct: 430 KDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGHLGIRDLQAN 489
Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
D+G Y C A N +L VKE T IT P + G TF C A DPSL+ S
Sbjct: 490 DTGRYFCQAANDQNNVTILANLQVKEATQITQGPRSTIEKKGARVTFTCQASFDPSLQAS 549
Query: 341 IVWLRGSEPID--FESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT-LT 397
I W + +S+ F++ D L + D G Y+C A TELD +E++A L
Sbjct: 550 ITWRGDGRDLQERGDSDKYFIE--DGQLVIKSLDYSDQGDYSCVASTELDEVESRAQLLV 607
Query: 398 VQVPLEAPS-NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELI 456
V P P + ++ + +SW+P + Y ++ ++ L
Sbjct: 608 VGSPGPVPHLELSDRHLLKQSQVHLSWSPA--EDHNSPIEKYDIEFEDKEMAPEKWFSLG 665
Query: 457 VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVP 504
G T+T + K P RV A N G PS + + VTPE P
Sbjct: 666 KVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 713
Score = 145 bits (367), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 161/585 (27%), Positives = 251/585 (42%), Gaps = 93/585 (15%)
Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--NLRKSDTGN 194
A + +++ EC A G P P I W+H P+ P R + T++ N+ + D G
Sbjct: 253 ALQGQSLILECIAEGFPTPTIKWLHPSDPM----PTDRVIYQNHNKTLQLLNVGEEDDGE 308
Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
Y C A NSLG YV V A AP + P+ G+T L C+V G P+PEV W
Sbjct: 309 YTCLAENSLGSARHAYYVTVEA-APYWLQKPQSHLYGPGETARLDCQVQGRPQPEVTWRI 367
Query: 255 N----QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH- 309
N +K +Y I E G L +++V +D+ C ARN+ G + + V +
Sbjct: 368 NGMSIEKVNKDQKYRI-EQGSLILSNVQPSDTMVTQCEARNQHGLLLANAYIYVVQLPAR 426
Query: 310 -ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
+T + Y G +A C A P S+ WL + E F +N + L +
Sbjct: 427 ILTKDNQTYMAVEGSTAYLLCKAFGAPVP--SVQWLDEEGTTVLQDERFFPYANGH-LGI 483
Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE-------------APSNFTLIQVID 415
D+G+Y C+A + + + A L V+ + A FT D
Sbjct: 484 RDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITQGPRSTIEKKGARVTFTCQASFD 543
Query: 416 -AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSIREL-IVNKGEST---TTE 466
+ +A ++W RG R + + ++K DG+ I+ L ++G+ + +TE
Sbjct: 544 PSLQASITW--------RGDGRDLQERGDSDKYFIEDGQLVIKSLDYSDQGDYSCVASTE 595
Query: 467 VDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP---LGSSAFYLK 523
+D+ ++ A++L G PG V LE L S +L
Sbjct: 596 LDEV----ESRAQLLVV------------------GSPGPVPHLELSDRHLLKQSQVHLS 633
Query: 524 WVKPEQPNGVLMGYKIKYQSVKGTKVGP----LLERLPYISDPTTTSAKLAGLEPSTKYR 579
W E N + Y I+++ ++ P L ++P + T+T+ KL+ P Y
Sbjct: 634 WSPAEDHNSPIEKYDIEFED---KEMAPEKWFSLGKVP--GNQTSTTLKLS---PYVHYT 685
Query: 580 IHLAGYTKAGDGAESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAP 633
+ K G G S V P KNP +V G G+ NN+VI+W + ++ NAP
Sbjct: 686 FRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAP 745
Query: 634 HFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
+YR+ WR E W + V D LV++N TF PYEIKV
Sbjct: 746 QIQYRVQWRPLGKQETWKEQTVSD---PFLVVSNTSTFVPYEIKV 787
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 167/688 (24%), Positives = 269/688 (39%), Gaps = 78/688 (11%)
Query: 53 LFCIFGGTPLPQTIWSKDGVPINPSD-----RISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
L C G P P+ W +G+ I + RI QG SLI+ +V+ SD CE
Sbjct: 351 LDCQVQGRPQPEVTWRINGMSIEKVNKDQKYRIEQG----SLILSNVQPSDTMVTQCEAR 406
Query: 108 N--GVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV-HNGK 164
N G+ A +Y I + L A T + + A E T CKA G P P + W+ G
Sbjct: 407 NQHGLLLANAY-IYVVQLPARILTKDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGT 465
Query: 165 PISQAPPNPRRKVGP---NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-LAHAPE 220
+ Q + P + I +L+ +DTG Y C A N V + N+ + A +
Sbjct: 466 TVLQ-----DERFFPYANGHLGIRDLQANDTGRYFCQAANDQNNV--TILANLQVKEATQ 518
Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAP--KPEVNWIHNQKELT----GGRYTILETGDLKI 274
IT+ P+ G V TC+ P + + W + ++L +Y I E G L I
Sbjct: 519 ITQGPRSTIEKKGARVTFTCQASFDPSLQASITWRGDGRDLQERGDSDKYFI-EDGQLVI 577
Query: 275 TDVAFADSGEYTCFARNKLGTAQGSGSLTVK------EHTHITDQP--EDYEVEAGQSAT 326
+ ++D G+Y+C A +L + L V H ++D+ + +V S
Sbjct: 578 KSLDYSDQGDYSCVASTELDEVESRAQLLVVGSPGPVPHLELSDRHLLKQSQVHLSWSPA 637
Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRF----VQSNDYSLTVTKSSELDSGQYTCR 382
N+ P K I + E + E F V N S T+ S + YT R
Sbjct: 638 EDHNS---PIEKYDIEF----EDKEMAPEKWFSLGKVPGNQTSTTLKLSPYV---HYTFR 687
Query: 383 AQTELDFIEAQ---ATLTVQVPLEAPSNFTLI---QVIDAKKAVVSWNPVSPQSLRGHFR 436
+ + + TV P AP + + + V++W P+
Sbjct: 688 VTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAPQI 747
Query: 437 GYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS 496
Y+VQ W + + +E V+ + FVP +V A N GP ++
Sbjct: 748 QYRVQ-WRPLGKQETWKEQTVSDPFLVVSNTSTFVPYE---IKVQAVNNQGKGPEPQVTI 803
Query: 497 FVTPEGVPGTVQSLEAIPL-GSSAFYLKW--VKPEQPNGVLMGYKIKY--QSVKGTKVGP 551
+ E P LE I + SS ++W V Q G L GY + Y + +
Sbjct: 804 GYSGEDYPQVSPELEDITIFNSSTVLVRWRPVDLAQVKGHLRGYNVTYWWKGSQRKHSKR 863
Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF---KNPDNV 608
+ + + TTSA L+GL P + Y + + + G G S++ F P +P+ +
Sbjct: 864 HVHKSHMVVPANTTSAILSGLRPYSSYHVEVQAFNGRGLGPASEWTFSTPEGVPGHPEAL 923
Query: 609 EGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQ 668
+ +L++ W P + HN Y + + + GE+ Q + EL N
Sbjct: 924 HLECQSDTSLLLHW--QPPLSHNGVLTGYLLSYHPLD-GESKEQ-LFFNLSDPELRTHNL 979
Query: 669 PTFQP---YEIKVVQTWTEKDGEGSIRE 693
P Y ++ T + GE +RE
Sbjct: 980 TNLNPDLQYRFQLQATTHQGPGEAIVRE 1007
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 164/387 (42%), Gaps = 31/387 (8%)
Query: 41 KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLIIK-HVE 95
++ V + L C G P + W+KDG+ P + + + Y S I+ +
Sbjct: 43 RRLVVFPTDDISLKCEARGRPQVEFRWTKDGIHFKPKEELGVVVHEAPYSGSFTIEGNNS 102
Query: 96 FSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKAS 150
F+ QG Y C SN +G A S+ I L AP + TV+P + E + S
Sbjct: 103 FAQRFQGIYRCYASNNLGTAMSHEIQLVAEGAPKWPKETVKPVEVEEGESVVLPCNPPPS 162
Query: 151 GLPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLGYV 206
P I+W+ N K I + R +G N + N+ SD +Y CNA + +
Sbjct: 163 AAPL-RIYWM-NSK-ILHIKQDERVSMGQNGDLYFANVLTSDNHSDYICNAHFPGTRTII 219
Query: 207 YK---DVYV----NVLAHAPEI---TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
K D+ V +++ P + T + + G++++L C G P P + W+H
Sbjct: 220 QKEPIDLRVKPTNSMIDRKPRLLFPTNSSSHLVALQGQSLILECIAEGFPTPTIKWLHPS 279
Query: 257 KELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE 315
+ R L++ +V D GEYTC A N LG+A+ + +TV+ + +P+
Sbjct: 280 DPMPTDRVIYQNHNKTLQLLNVGEEDDGEYTCLAENSLGSARHAYYVTVEAAPYWLQKPQ 339
Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
+ G++A C P + + W I+ ++ + + SL ++ D
Sbjct: 340 SHLYGPGETARLDCQVQGRP--QPEVTWRINGMSIEKVNKDQKYRIEQGSLILSNVQPSD 397
Query: 376 SGQYTCRAQTELDFIEAQATL-TVQVP 401
+ C A+ + + A A + VQ+P
Sbjct: 398 TMVTQCEARNQHGLLLANAYIYVVQLP 424
>sp|P11627|L1CAM_MOUSE Neural cell adhesion molecule L1 OS=Mus musculus GN=L1cam PE=1 SV=1
Length = 1260
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 145/476 (30%), Positives = 211/476 (44%), Gaps = 29/476 (6%)
Query: 44 VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
VAL+ + + L CI G P P W P+ P+DR+ N+ K+L + +V D G YT
Sbjct: 252 VALQGQSLILECIAEGFPTPTIKWLHPSDPM-PTDRVIYQNHNKTLQLLNVGEEDDGEYT 310
Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
C N +G A+ ++ ++V AAPY+ +P+ ET +C+ G P+PEI W NG
Sbjct: 311 CLAENSLGSAR-HAYYVTVEAAPYWLQKPQSHLYGPGETARLDCQVQGRPQPEITWRING 369
Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
+ + + ++ + + N++ +DT C A N G + + Y+ V+ I
Sbjct: 370 MSMETVNKDQKYRIEQGSLILSNVQPTDTMVTQCEARNQHGLLLANAYIYVVQLPARILT 429
Query: 224 APKDEY-TVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFA 280
Y V+G T L C+ FGAP P V W+ + L R+ G L I D+
Sbjct: 430 KDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGTLSIRDLQAN 489
Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
D+G Y C A N +L VKE T IT P + G TF C A DPSL+ S
Sbjct: 490 DTGRYFCQAANDQNNVTILANLQVKEATQITQGPRSAIEKKGARVTFTCQASFDPSLQAS 549
Query: 341 IVWL--------RGSEPIDFESEPRFV-QSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
I W RG F + + V QS DYS D G Y+C A TELD +E
Sbjct: 550 ITWRGDGRDLQERGDSDKYFIEDGKLVIQSLDYS---------DQGNYSCVASTELDEVE 600
Query: 392 AQAT-LTVQVPLEAPS-NFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGE 449
++A L V P P + ++ + +SW+P + Y ++ ++
Sbjct: 601 SRAQLLVVGSPGPVPHLELSDRHLLKQSQVHLSWSPA--EDHNSPIEKYDIEFEDKEMAP 658
Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII-SFVTPEGVP 504
L G T+T + K P RV A N G PS + S VTPE P
Sbjct: 659 EKWFSLGKVPGNQTSTTL-KLSPYVHYTFRVTAINKYGPGEPSPVSESVVTPEAAP 713
Score = 145 bits (367), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 159/585 (27%), Positives = 246/585 (42%), Gaps = 93/585 (15%)
Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE--NLRKSDTGN 194
A + +++ EC A G P P I W+H P+ P R + T++ N+ + D G
Sbjct: 253 ALQGQSLILECIAEGFPTPTIKWLHPSDPM----PTDRVIYQNHNKTLQLLNVGEEDDGE 308
Query: 195 YGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH 254
Y C A NSLG YV V A AP + P+ G+T L C+V G P+PE+ W
Sbjct: 309 YTCLAENSLGSARHAYYVTVEA-APYWLQKPQSHLYGPGETARLDCQVQGRPQPEITWRI 367
Query: 255 NQKEL----TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH- 309
N + +Y I E G L +++V D+ C ARN+ G + + V +
Sbjct: 368 NGMSMETVNKDQKYRI-EQGSLILSNVQPTDTMVTQCEARNQHGLLLANAYIYVVQLPAR 426
Query: 310 -ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
+T + Y G +A C A P S+ WL + E RF + +L++
Sbjct: 427 ILTKDNQTYMAVEGSTAYLLCKAFGAPVP--SVQWLDEEGTTVLQDE-RFFPYANGTLSI 483
Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE-------------APSNFTLIQVID 415
D+G+Y C+A + + + A L V+ + A FT D
Sbjct: 484 RDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITQGPRSAIEKKGARVTFTCQASFD 543
Query: 416 -AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSIRELIV----NKGESTTTE 466
+ +A ++W RG R + + ++K DG+ I+ L N +TE
Sbjct: 544 PSLQASITW--------RGDGRDLQERGDSDKYFIEDGKLVIQSLDYSDQGNYSCVASTE 595
Query: 467 VDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIP---LGSSAFYLK 523
+D+ ++ A++L G PG V LE L S +L
Sbjct: 596 LDEV----ESRAQLLVV------------------GSPGPVPHLELSDRHLLKQSQVHLS 633
Query: 524 WVKPEQPNGVLMGYKIKYQSVKGTKVGP----LLERLPYISDPTTTSAKLAGLEPSTKYR 579
W E N + Y I+++ ++ P L ++P + T+T+ KL+ P Y
Sbjct: 634 WSPAEDHNSPIEKYDIEFED---KEMAPEKWFSLGKVP--GNQTSTTLKLS---PYVHYT 685
Query: 580 IHLAGYTKAGDGAESKYLFYV------PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAP 633
+ K G G S V P KNP +V G G+ NN+VI+W + ++ NAP
Sbjct: 686 FRVTAINKYGPGEPSPVSESVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAP 745
Query: 634 HFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
+YR+ WR E W + V D LV++N TF PYEIKV
Sbjct: 746 QIQYRVQWRPQGKQETWRKQTVSD---PFLVVSNTSTFVPYEIKV 787
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 85/189 (44%), Gaps = 9/189 (4%)
Query: 411 IQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTW----TEKDGEGSI-RELIVNKGESTTT 465
I + ++ +V W PV ++GH +GY V W K + I + IV +T+
Sbjct: 820 ITIFNSSTVLVRWRPVDLAQVKGHLKGYNVTYWWKGSQRKHSKRHIHKSHIVVPANTTSA 879
Query: 466 EVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWV 525
+ P S V AFNG GP SE +F TPEGVPG ++L ++ L W
Sbjct: 880 ILSGLRPYSSYHVEVQAFNGRGLGPASEW-TFSTPEGVPGHPEALHLECQSDTSLLLHWQ 938
Query: 526 KPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGY 585
P NGVL GY + Y V+G L L SDP + L L P +YR L
Sbjct: 939 PPLSHNGVLTGYLLSYHPVEGESKEQLFFNL---SDPELRTHNLTNLNPDLQYRFQLQAT 995
Query: 586 TKAGDGAES 594
T+ G E+
Sbjct: 996 TQQGGPGEA 1004
Score = 89.4 bits (220), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 165/387 (42%), Gaps = 31/387 (8%)
Query: 41 KKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR----ISQGNYGKSLIIK-HVE 95
++ V + L C G P + W+KDG+ P + + + Y S I+ +
Sbjct: 43 RRLVVFPTDDISLKCEARGRPQVEFRWTKDGIHFKPKEELGVVVHEAPYSGSFTIEGNNS 102
Query: 96 FSD--QGSYTCEVSNGVGEAKSYSIDLSVLAAPYF---TVEPEFINAAEEETVTFECKAS 150
F+ QG Y C SN +G A S+ I L AP + TV+P + E + S
Sbjct: 103 FAQRFQGIYRCYASNKLGTAMSHEIQLVAEGAPKWPKETVKPVEVEEGESVVLPCNPPPS 162
Query: 151 GLPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNAT--NSLGYV 206
P P I+W+++ I + R +G N + N+ SD +Y CNA + +
Sbjct: 163 AAP-PRIYWMNSK--IFDIKQDERVSMGQNGDLYFANVLTSDNHSDYICNAHFPGTRTII 219
Query: 207 YK---DVYV----NVLAHAPEI---TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
K D+ V +++ P + T + + G++++L C G P P + W+H
Sbjct: 220 QKEPIDLRVKPTNSMIDRKPRLLFPTNSSSRLVALQGQSLILECIAEGFPTPTIKWLHPS 279
Query: 257 KELTGGRYTIL-ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE 315
+ R L++ +V D GEYTC A N LG+A+ + +TV+ + +P+
Sbjct: 280 DPMPTDRVIYQNHNKTLQLLNVGEEDDGEYTCLAENSLGSARHAYYVTVEAAPYWLQKPQ 339
Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
+ G++A C P + I W ++ ++ + + SL ++ D
Sbjct: 340 SHLYGPGETARLDCQVQGRP--QPEITWRINGMSMETVNKDQKYRIEQGSLILSNVQPTD 397
Query: 376 SGQYTCRAQTELDFIEAQATL-TVQVP 401
+ C A+ + + A A + VQ+P
Sbjct: 398 TMVTQCEARNQHGLLLANAYIYVVQLP 424
>sp|P68500|CNTN5_MOUSE Contactin-5 OS=Mus musculus GN=Cntn5 PE=1 SV=2
Length = 1098
Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 160/609 (26%), Positives = 256/609 (42%), Gaps = 45/609 (7%)
Query: 45 ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
A + V++ C G P+P W K I R+ + L I +++ D G Y C
Sbjct: 311 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRKSQ--AVLEIPNLQLDDAGIYEC 368
Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
N G+ S+ L + P++ + + +ECKA+G P P W+ NG
Sbjct: 369 TAENSRGK-NSFRGQLQIFTYPHWVQKLNDTQLDSGSPLQWECKATGKPRPTYRWLKNGA 427
Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP--EIT 222
P+ P R + I+++ +SD G Y C A N G +Y + +LA P E+
Sbjct: 428 PLL---PQSRVDTVNGILAIQSVNQSDAGMYQCLAENKYGAIYASAELKILASPPSFELN 484
Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFAD 281
+ K + V++ C G+PKP ++W K + R IL G L+I + + AD
Sbjct: 485 QVKKSIIVTKDRGVLIECEPQGSPKPAISWRKGDKAVRANKRIAILPDGSLRILNASKAD 544
Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
G+Y C N G+A+ SL+VKE T I P+ E+ G+S C A+ D SL ++
Sbjct: 545 EGKYICQGVNIFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 604
Query: 342 VWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
W +PIDFE E Q++ L + + +G+Y CR QT D + +A L
Sbjct: 605 YWTLKGQPIDFEKEGGHFENIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAEL 664
Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQT-------WTEKDGE 449
V+ P P +++ I A +SW+P + Y +Q W
Sbjct: 665 LVRGP-PGPPGVVIVEEITESTATLSWSPATDN--HSPISSYNLQARSPFSLGWQTVK-- 719
Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQ 508
++ E+I ES VD P + RV+A N G PS + T E VP T
Sbjct: 720 -TVPEVITGDMESAMA-VD-LNPWVEYEFRVVATNPIGTGDPSIPSRMIRTNEAVPKTAP 776
Query: 509 SLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYISDPT 563
S + G + W V E NG GY + ++ +G K E++ S+ +
Sbjct: 777 SNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSSEAS 831
Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTPNNL 618
+ + P T + + + Y GDG S+ + P P +V + + +
Sbjct: 832 KFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPTAAPTDVTATSVSVSEI 891
Query: 619 VISWTAMPE 627
+ W + E
Sbjct: 892 FVVWKHVKE 900
Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 163/669 (24%), Positives = 244/669 (36%), Gaps = 91/669 (13%)
Query: 89 LIIKHVEFSDQGSYTCEVSNGVGEAKSYS-------IDLSVLAAPYFTVEPEF---INAA 138
L I V+ SD GSY C V N V A+ S + V+ +E F + AA
Sbjct: 253 LYISKVQTSDVGSYICLVKNAVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAA 312
Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
+ TV EC A G P P I W+ NG P R + + I NL+ D G Y C
Sbjct: 313 KGTTVKMECFALGNPVPTITWMKVNG----YIPSKSRLRKSQAVLEIPNLQLDDAGIYEC 368
Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK 257
A NS G + + + P + D G + C+ G P+P W+ N
Sbjct: 369 TAENSRGKNSFRGQLQIFTY-PHWVQKLNDTQLDSGSPLQWECKATGKPRPTYRWLKNGA 427
Query: 258 ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDY 317
L G L I V +D+G Y C A NK G S L I P +
Sbjct: 428 PLLPQSRVDTVNGILAIQSVNQSDAGMYQCLAENKYGAIYASAEL------KILASPPSF 481
Query: 318 E---------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
E V + C P K +I W +G + + + R D SL +
Sbjct: 482 ELNQVKKSIIVTKDRGVLIECEPQGSP--KPAISWRKGDKAV--RANKRIAILPDGSLRI 537
Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLI----------QVID 415
+S+ D G+Y C+ E A+L+V+ P P L + D
Sbjct: 538 LNASKADEGKYICQGVNIFGSAEIIASLSVKEPTRIELTPKRTELTVGESIVLNCKAIHD 597
Query: 416 AKKAVVSW-----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKF 470
A V + P+ + GHF + Q + IR +++ V
Sbjct: 598 ASLDVTFYWTLKGQPIDFEKEGGHFENIRAQA---SSADLMIRNILLMHAGRYGCRVQTT 654
Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
+ + A +L GPP G PG V E + S L W
Sbjct: 655 ADSVSDEAELLV-----RGPP----------GPPGVVIVEE---ITESTATLSWSPATDN 696
Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
+ + Y ++ +S +G ++ +P + SA L P +Y + G
Sbjct: 697 HSPISSYNLQARS--PFSLGWQTVKTVPEVITGDMESAMAVDLNPWVEYEFRVVATNPIG 754
Query: 590 DGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
G S + VP P NV GR + LVI+W + E N F Y + +R
Sbjct: 755 TGDPSIPSRMIRTNEAVPKTAPSNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRP 814
Query: 644 HNTGEAWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGSIRELIV---NK 698
+ T W + V S+ + ++ P P+E+K V + K G+G +++V +
Sbjct: 815 NGT-RGWKEKMVTSSEASKFIYRDESVPPLTPFEVK-VGVYNNK-GDGPFSQIVVICSAE 871
Query: 699 GESTTTEVD 707
GE T D
Sbjct: 872 GEPTAAPTD 880
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 150/394 (38%), Gaps = 39/394 (9%)
Query: 49 KKVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
KKV L C G P P W ++G I SD G +I E D G Y C +
Sbjct: 116 KKVALNCEVRGNPSPSYRWLRNGTEIALESDYRYSLIDGTFIISNPSELRDSGLYQCLAT 175
Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECK-ASGLPEPEIHWVHNGKP 165
N G S L F+ ++ E + V C PE WV N P
Sbjct: 176 NSFGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 235
Query: 166 ISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY----------------VY 207
S + RR + + I ++ SD G+Y C N++ V
Sbjct: 236 -SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAVTNARVLSPPTPLTLRNDGVM 294
Query: 208 KDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTIL 267
+ + H P A K G TV + C G P P + W+ +
Sbjct: 295 GEYEPKIEVHFPFTVTAAK------GTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRK 348
Query: 268 ETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
L+I ++ D+G Y C A N G G L + + H + D ++++G +
Sbjct: 349 SQAVLEIPNLQLDDAGIYECTAENSRGKNSFRGQLQIFTYPHWVQKLNDTQLDSGSPLQW 408
Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
C A P + + WL+ P+ +S V + + L + ++ D+G Y C A+ +
Sbjct: 409 ECKATGKP--RPTYRWLKNGAPLLPQSR---VDTVNGILAIQSVNQSDAGMYQCLAENKY 463
Query: 388 DFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVV 421
I A A L + L +P +F L QV KK+++
Sbjct: 464 GAIYASAELKI---LASPPSFELNQV---KKSII 491
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 123/299 (41%), Gaps = 39/299 (13%)
Query: 113 AKSYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
+ ++ D SV P F EP+ F ++E+ V C+ G P P W+ NG I+
Sbjct: 85 SDAFRQDESVDYGPVFVQEPDDVIFPTDSDEKKVALNCEVRGNPSPSYRWLRNGTEIALE 144
Query: 170 PPNPRRKVGPNRITIEN---LRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPK 226
+ R + I N LR D+G Y C ATNS G + A+ + +
Sbjct: 145 -SDYRYSLIDGTFIISNPSELR--DSGLYQCLATNSFGSILSREATLQFAYLGNFSGRTR 201
Query: 227 DEYTV-DGKTVVLTCRVFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITD 276
+V +G+ VVL C +P P +W+ N+ R+ ETG+L I+
Sbjct: 202 SAVSVREGQGVVLMC----SPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISK 257
Query: 277 VAFADSGEYTCFARNKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSA 325
V +D G Y C +N + A+ LT++ + + EV G +
Sbjct: 258 VQTSDVGSYICLVKNAVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTV 317
Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
C A+ +P +I W++ + I +S R Q+ L + D+G Y C A+
Sbjct: 318 KMECFALGNPV--PTITWMKVNGYIPSKSRLRKSQA---VLEIPNLQLDDAGIYECTAE 371
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 9/165 (5%)
Query: 40 RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
+K + +++ V + C G+P P W K + + RI+ G SL I + +D+
Sbjct: 487 KKSIIVTKDRGVLIECEPQGSPKPAISWRKGDKAVRANKRIAILPDG-SLRILNASKADE 545
Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA--SGLPEPEI 157
G Y C+ N G A+ + LSV + P+ E++ CKA +
Sbjct: 546 GKYICQGVNIFGSAEIIA-SLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDASLDVTF 604
Query: 158 HWVHNGKPISQAP-----PNPRRKVGPNRITIENLRKSDTGNYGC 197
+W G+PI N R + + I N+ G YGC
Sbjct: 605 YWTLKGQPIDFEKEGGHFENIRAQASSADLMIRNILLMHAGRYGC 649
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
P AP++ T V + V W V +SL G +G+++ W + + E S+ E + +G
Sbjct: 874 PTAAPTDVTATSV-SVSEIFVVWKHVK-ESL-GRPQGFEISYWKDTEPEDSV-ETVRTRG 929
Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT----PEGVPGTVQSLEAIPLG 516
+ + + V A+NGA GPPS S T P PG ++ +
Sbjct: 930 NESFVMLTGLEGNTLYHLTVRAYNGAGYGPPSREASTTTKRHPPREPPGNLRWEQQ---- 985
Query: 517 SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 574
S L W V+P +MGYK+ Y+ +G G ++E T + L
Sbjct: 986 GSQVSLGWEPVRPLANESEVMGYKVFYRQ-EGHSEGQVIE--------TQKPQAVVPLPE 1036
Query: 575 STKYRIHLAGYTKAGDGAESKYL 597
+ Y I + Y++ GDG S +
Sbjct: 1037 AGVYIIEVRAYSEGGDGTASSQI 1059
>sp|Q90W79|CNTN5_CHICK Contactin-5 OS=Gallus gallus GN=CNTN5 PE=1 SV=1
Length = 1027
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 166/612 (27%), Positives = 265/612 (43%), Gaps = 51/612 (8%)
Query: 45 ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSD---RISQGNYGKSLIIKHVEFSDQG 100
A R V++ C G P+P W K +G NPS R SQ L I +V+ D G
Sbjct: 239 AARGTTVKMECFALGNPVPTISWKKVNGH--NPSKARLRKSQA----VLEIPNVQLEDAG 292
Query: 101 SYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWV 160
Y C+ N G + L V P + + E + +ECKA+G P P W+
Sbjct: 293 MYECKAENSRGR-NVFRGQLQVYTYPQWVEKLNDTELDSGEQLRWECKATGKPRPTYRWL 351
Query: 161 HNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPE 220
NG P+ P R ++ + + I + SD G Y C A N G +Y + +LA AP
Sbjct: 352 KNGVPLW---PQSRIEMINSVLMIRTVNISDAGMYQCLAENKYGTIYASAELKILASAPT 408
Query: 221 --ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDV 277
+ + K G+ VV+ C+ +PKP + W K L R TIL G L+I +
Sbjct: 409 FPLNQMRKTIIITKGQEVVIECKPQASPKPTITWKKGDKALRESKRVTILPQGSLRILNA 468
Query: 278 AFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSL 337
+ +D G Y+C N G+A+ S++VKE T I P+ E+ G+S C A+ D +L
Sbjct: 469 SKSDEGRYSCRGVNVFGSAEIVASVSVKEPTRIELTPKKIELTVGESIVLSCKALHDSTL 528
Query: 338 KLSIVWLRGSEPIDFESEPRF-----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
++ W +PIDF+ E Q++ L + + +G+Y CR QT D +
Sbjct: 529 DVTFYWTLNGQPIDFDKEDGHFESIKAQASSADLMIRNILLMHAGRYGCRVQTAADAVSD 588
Query: 393 QATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEKD- 447
+ L V+ P P +++ I A +SW+P SP SL Y +Q +
Sbjct: 589 ETELLVRGP-PGPPGVVIVEEITDTTATLSWSPGADNHSPISL------YNLQARSPFSL 641
Query: 448 GEGSIREL-IVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
G +++ + V G+ + + P + RV+A N G PS + T E VP
Sbjct: 642 GWQTVKTVPDVISGDMESAMAVELNPWVEYEFRVVATNKIGTGDPSAPSRMIRTNEAVPK 701
Query: 506 TVQSLEAIPLGSS-AFYLKW--VKPEQPNGVLMGYKIKYQ--SVKGTKVGPLLERLPYIS 560
T + + G + W V E NG GY + ++ +G K E++ S
Sbjct: 702 TPPANVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWK-----EKMVTSS 756
Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGSTP 615
D + + + P T + + + Y GDG S + P P +V+ +
Sbjct: 757 DASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSPIVVICSAEGEPTAAPIDVKATSLSV 816
Query: 616 NNLVISWTAMPE 627
+ ++++W + E
Sbjct: 817 SEILVAWKHIKE 828
Score = 126 bits (316), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 163/662 (24%), Positives = 246/662 (37%), Gaps = 75/662 (11%)
Query: 88 SLIIKHVEFSDQGSYTCEVSNGVGEAKSYS----IDL---SVLAAPYFTVEPEF---INA 137
+L I V+ SD GSY C V N V A+ S + L V+ +E F + A
Sbjct: 180 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPYTVTA 239
Query: 138 AEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
A TV EC A G P P I W K P R + + I N++ D G Y C
Sbjct: 240 ARGTTVKMECFALGNPVPTISW---KKVNGHNPSKARLRKSQAVLEIPNVQLEDAGMYEC 296
Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQK 257
A NS G + V + P+ E D G+ + C+ G P+P W+ N
Sbjct: 297 KAENSRGRNVFRGQLQVYTY-PQWVEKLNDTELDSGEQLRWECKATGKPRPTYRWLKNGV 355
Query: 258 ELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH---ITDQP 314
L + L I V +D+G Y C A NK GT S L + +
Sbjct: 356 PLWPQSRIEMINSVLMIRTVNISDAGMYQCLAENKYGTIYASAELKILASAPTFPLNQMR 415
Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL 374
+ + GQ C + P K +I W +G + + R SL + +S+
Sbjct: 416 KTIIITKGQEVVIECKPQASP--KPTITWKKGDKAL--RESKRVTILPQGSLRILNASKS 471
Query: 375 DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVS------------ 422
D G+Y+CR E A+++V+ P I++ + V+S
Sbjct: 472 DEGRYSCRGVNVFGSAEIVASVSVKEPTRIELTPKKIELTVGESIVLSCKALHDSTLDVT 531
Query: 423 --W----NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
W P+ GHF K Q + IR +++ V A +
Sbjct: 532 FYWTLNGQPIDFDKEDGHFESIKAQA---SSADLMIRNILLMHAGRYGCRVQTAADAVSD 588
Query: 477 FARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGS--SAFYLKWVKPEQPNGVL 534
+L GPP +I E + T +L P S L ++ P
Sbjct: 589 ETELLVRGPP--GPPGVVIV----EEITDTTATLSWSPGADNHSPISLYNLQARSP---- 638
Query: 535 MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG--- 591
+ + +Q+VK +P + SA L P +Y + K G G
Sbjct: 639 --FSLGWQTVK---------TVPDVISGDMESAMAVELNPWVEYEFRVVATNKIGTGDPS 687
Query: 592 AESKYLF---YVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
A S+ + VP P NV GR + LVI+W + E N F Y + +R + T
Sbjct: 688 APSRMIRTNEAVPKTPPANVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGT-R 746
Query: 649 AWNQDDVLDWRQSELVLANQ--PTFQPYEIKVVQTWTEKDGEGS-IRELIVNKGESTTTE 705
W + V S+ + ++ P P+E+KV + DG S I + +GE T
Sbjct: 747 GWKEKMVTSSDASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSPIVVICSAEGEPTAAP 806
Query: 706 VD 707
+D
Sbjct: 807 ID 808
Score = 100 bits (248), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 155/697 (22%), Positives = 274/697 (39%), Gaps = 72/697 (10%)
Query: 36 QYVTRKKEVALRN-KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV 94
Q+V + + L + +++ C G P P W K+GVP+ P RI N L+I+ V
Sbjct: 318 QWVEKLNDTELDSGEQLRWECKATGKPRPTYRWLKNGVPLWPQSRIEMIN--SVLMIRTV 375
Query: 95 EFSDQGSYTCEVSNGVGEAKSYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASG 151
SD G Y C N G + S +L +LA AP F + + I + + V ECK
Sbjct: 376 NISDAGMYQCLAENKYGTIYA-SAELKILASAPTFPLNQMRKTIIITKGQEVVIECKPQA 434
Query: 152 LPEPEIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDV 210
P+P I W K + ++ R + P + I N KSD G Y C N G ++
Sbjct: 435 SPKPTITWKKGDKALRESK---RVTILPQGSLRILNASKSDEGRYSCRGVNVFGSA--EI 489
Query: 211 YVNVLAHAP-EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVN--WIHNQKELT----GGR 263
+V P I PK G+++VL+C+ +V W N + + G
Sbjct: 490 VASVSVKEPTRIELTPKKIELTVGESIVLSCKALHDSTLDVTFYWTLNGQPIDFDKEDGH 549
Query: 264 YTILE----TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVK-----EHTHITDQP 314
+ ++ + DL I ++ +G Y C + L V+ I ++
Sbjct: 550 FESIKAQASSADLMIRNILLMHAGRYGCRVQTAADAVSDETELLVRGPPGPPGVVIVEEI 609
Query: 315 EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVT 369
D +AT + +D +S+ L+ P ++ P + + S
Sbjct: 610 TD------TTATLSWSPGADNHSPISLYNLQARSPFSLGWQTVKTVPDVISGDMESAMAV 663
Query: 370 KSSELDSGQYTCRAQTELDFIEAQATLTV-----QVPLEAPSNFTLIQVIDAKKAVVSWN 424
+ + ++ A ++ + A + VP P+N + + + V++W
Sbjct: 664 ELNPWVEYEFRVVATNKIGTGDPSAPSRMIRTNEAVPKTPPANVSG-RSGRRHELVIAWE 722
Query: 425 PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF-ARVLAF 483
PVS + G GY V + G +++ + S D+ VP F +V +
Sbjct: 723 PVSEEFQNGEGFGYIV-AFRPNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEVKVGVY 781
Query: 484 NGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
N +GP S I+ + EG P ++A L S + W ++ G G++I Y
Sbjct: 782 NNKGDGPFSPIVVICSAEGEPTAAPIDVKATSLSVSEILVAWKHIKESLGRPQGFEIGYW 841
Query: 543 SVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPF 602
K + E++ + +S L GLE +T Y + + Y AG G S +
Sbjct: 842 --KDMEQEEAAEKVKTAGN--ESSLLLTGLEGNTLYHLTVRAYNAAGYGPPSTAVRVATK 897
Query: 603 KNPDNVEGRGSTPNNLV---------ISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQD 653
K+P + P+N++ + W + + + + Y++ R+ E +
Sbjct: 898 KSPPS-----QAPSNVMWIQDGSHVSLGWEPVRPLANESEVMGYKVLLRQ----EGQSNS 948
Query: 654 DVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGS 690
V++ +++ V+ P Y I+V DG S
Sbjct: 949 QVIETQKTSAVVI-LPDVGVYIIEVCAVSEGGDGTAS 984
Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 150/387 (38%), Gaps = 38/387 (9%)
Query: 49 KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
KKV L C G+P P W ++G I+ SLII + E D G Y C +
Sbjct: 44 KKVSLNCQAHGSPTPTYRWLRNGTEIDVESDYRYSLIEGSLIISNPNEMKDSGQYQCLTT 103
Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPE-FINAAEEETVTFECKASGLPEPEI--HWVHNGK 164
N G S L F+ ++ E + V C + L PEI WV N
Sbjct: 104 NMFGSILSREAVLQFAYLGNFSGRTRSAVSVREGQGVVLMC-SPPLHSPEIIYSWVFNEF 162
Query: 165 PISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
P S + RR + + I ++ SD G+Y C N++ VL+ +T
Sbjct: 163 P-SFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV------TNARVLSPPTPLT 215
Query: 223 ---------EAPKDE----YTVD---GKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
PK E YTV G TV + C G P P ++W
Sbjct: 216 LRNDGVMGEYEPKIEVHFPYTVTAARGTTVKMECFALGNPVPTISWKKVNGHNPSKARLR 275
Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
L+I +V D+G Y C A N G G L V + ++ D E+++G+
Sbjct: 276 KSQAVLEIPNVQLEDAGMYECKAENSRGRNVFRGQLQVYTYPQWVEKLNDTELDSGEQLR 335
Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
+ C A P + + WL+ P+ +S + S TV S D+G Y C A+ +
Sbjct: 336 WECKATGKP--RPTYRWLKNGVPLWPQSRIEMINSVLMIRTVNIS---DAGMYQCLAENK 390
Query: 387 LDFIEAQATLTVQVPLEAPSNFTLIQV 413
I A A L + L + F L Q+
Sbjct: 391 YGTIYASAELKI---LASAPTFPLNQM 414
Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 118/285 (41%), Gaps = 27/285 (9%)
Query: 121 SVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
SV P F EP+ F +EE+ V+ C+A G P P W+ NG I + R +
Sbjct: 21 SVDYGPVFVQEPDDVIFPTDSEEKKVSLNCQAHGSPTPTYRWLRNGTEI-DVESDYRYSL 79
Query: 178 GPNRITIENLRK-SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKT 235
+ I N + D+G Y C TN G + V A+ + + +V +G+
Sbjct: 80 IEGSLIISNPNEMKDSGQYQCLTTNMFGSILSREAVLQFAYLGNFSGRTRSAVSVREGQG 139
Query: 236 VVLTCR-VFGAPKPEVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFAR 290
VVL C +P+ +W+ N+ R+ ETG+L I+ V +D G Y C +
Sbjct: 140 VVLMCSPPLHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVK 199
Query: 291 NKLGTAQGSG---SLTVKEHTHITDQPEDYEVE--------AGQSATFRCNAVSDPSLKL 339
N + A+ LT++ + + EV G + C A+ +P +
Sbjct: 200 NTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPYTVTAARGTTVKMECFALGNPVPTI 259
Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
S + G P S+ R +S L + D+G Y C+A+
Sbjct: 260 SWKKVNGHNP----SKARLRKSQAV-LEIPNVQLEDAGMYECKAE 299
>sp|Q8IWV2|CNTN4_HUMAN Contactin-4 OS=Homo sapiens GN=CNTN4 PE=1 SV=1
Length = 1026
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 191/727 (26%), Positives = 295/727 (40%), Gaps = 112/727 (15%)
Query: 51 VELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNG 109
V+L C G P+P IW + DG PI R + N L I + + D G Y C N
Sbjct: 243 VKLECFALGNPVPTIIWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGLYECVAENS 300
Query: 110 VGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
G+ + L+ A P + + I+ A EE V +ECKA+G P+P W+ NG+P+
Sbjct: 301 RGKNVARG-QLTFYAQPNWIQKINDIHVAMEENVFWECKANGRPKPTYKWLKNGEPLLT- 358
Query: 170 PPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
R ++ G ITI NL SD G Y C A N G ++ + ++V+A P+ +
Sbjct: 359 ----RDRIQIEQGTLNITIVNL--SDAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTL 412
Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFADS 282
T+ G VV+ C+ +PKP W + L R TI E G+L+I +V +D+
Sbjct: 413 LKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDA 472
Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
G YTC A N GTA +G+L VK+ T + P +V G+S C D SL +
Sbjct: 473 GSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFT 532
Query: 343 WLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
W IDF+ + Q + L + +G+Y C QT +D + A A L
Sbjct: 533 WSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLI 592
Query: 398 VQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK----DGE 449
V+ P P T+ ++ D A +SW P SP ++ Y +Q T
Sbjct: 593 VRGPPGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFSVGWQAV 645
Query: 450 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EIISFVTP 500
++ ELI G++ T V P + R +A N G PS E + VTP
Sbjct: 646 STVPELI--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTP 703
Query: 501 EGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPY 558
V G S S + W V E NG GY + ++ G ++ L
Sbjct: 704 ANVSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFR-----PYGKMIWMLTV 751
Query: 559 I--SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGR 611
+ +D + + + P + + + + + G+G S P K P ++ R
Sbjct: 752 LASADASRYVFRNESVHPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFAR 811
Query: 612 GSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTF 671
+ ++ + W + E N+
Sbjct: 812 SLSATDIEVFWASPLE--------------------------------------KNRGRI 833
Query: 672 QPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS 731
Q YE+K W +D E + R+ I G T+T++ + V A+N A GP S
Sbjct: 834 QGYEVKY---WRHEDKEENARK-IRTVGNQTSTKITNLKGSVLYHLAVKAYNSAGTGPSS 889
Query: 732 EIISFVT 738
++ T
Sbjct: 890 ATVNVTT 896
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 161/638 (25%), Positives = 240/638 (37%), Gaps = 85/638 (13%)
Query: 88 SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
+L I VE SD G+YTC V+N V K ++ P V+ PE +
Sbjct: 178 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPT 237
Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
A+ TV EC A G P P I W +GKPI++ RR + I N ++ D G Y
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIAR---KARRHKSNGILEIPNFQQEDAGLYE 294
Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
C A NS G + A P + D + + V C+ G PKP W+ N
Sbjct: 295 CVAENSRGKNVARGQLTFYAQ-PNWIQKINDIHVAMEENVFWECKANGRPKPTYKWLKNG 353
Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
+ L +E G L IT V +D+G Y C A NK G + L+V I P+
Sbjct: 354 EPLLTRDRIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSV-----IAVGPDF 408
Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
V+ G C + P K W +G + I E+E R S D +L +
Sbjct: 409 SRTLLKRVTLVKVGGEVVIECKPKASP--KPVYTWKKGRD-ILKENE-RITISEDGNLRI 464
Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
++ D+G YTC A + L V+ P + + V + V+
Sbjct: 465 INVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHD 524
Query: 429 QSL----RGHFRGYKVQTWTEKD------GEGSIRELIVNKGE---------STTTEVDK 469
SL F G+ + + D G+ S +L++ + T VD+
Sbjct: 525 HSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDR 584
Query: 470 FVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPE 528
A+ R GPP + E T Q S P S + ++
Sbjct: 585 LSAAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQAR 635
Query: 529 QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKA 588
P + + +Q+V +P + D T +A + GL P +Y
Sbjct: 636 TP------FSVGWQAV---------STVPELIDGKTFTATVVGLNPWVEYEFRTVAANVI 680
Query: 589 GDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWR 642
G G S + +P P NV G G + + LVI+W +PE N F Y + +R
Sbjct: 681 GIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFR 740
Query: 643 RHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKV 678
+ W + S V N+ F P+E+KV
Sbjct: 741 PYGK-MIWMLTVLASADASRYVFRNESVHPFSPFEVKV 777
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 143/369 (38%), Gaps = 30/369 (8%)
Query: 49 KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
KKV+L C G P P W +G ++ SL+I + + D G+Y C +
Sbjct: 44 KKVKLNCEVKGNPKPHIRWKLNGTDVDTGMDFRYSVVEGSLLINNPNKTQDAGTYQCTAT 103
Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVHN 162
N G S L F T ++ + + C G P E W+ N
Sbjct: 104 NSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMVLLC---GPPPHSGELSYAWIFN 160
Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN- 213
P Q + RR V + I + KSD GNY C TN+ LG + N
Sbjct: 161 EYPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRND 217
Query: 214 --VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILET 269
+ + P+I + P+ T G TV L C G P P + W + K +
Sbjct: 218 GVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHKSN 277
Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
G L+I + D+G Y C A N G G LT + + D V ++ + C
Sbjct: 278 GILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAMEENVFWEC 337
Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
A P K + WL+ EP+ +Q +L +T + D+G Y C A+ +
Sbjct: 338 KANGRP--KPTYKWLKNGEPLLTRDR---IQIEQGTLNITIVNLSDAGMYQCLAENKHGV 392
Query: 390 IEAQATLTV 398
I + A L+V
Sbjct: 393 IFSNAELSV 401
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 117/303 (38%), Gaps = 34/303 (11%)
Query: 119 DLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
D S L P F EP F +EE+ V C+ G P+P I W NG + + R
Sbjct: 19 DDSTLHGPIFIQEPSPVMFPLDSEEKKVKLNCEVKGNPKPHIRWKLNGTDVDTG-MDFRY 77
Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
V + I N K+ D G Y C ATNS G + A+ + +V G
Sbjct: 78 SVVEGSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRG 137
Query: 234 KTVVLTCRVFGAPKPEVN-----WIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYT 286
+ +VL C P P WI N+ R+ ETG+L I V +D G YT
Sbjct: 138 QGMVLLC----GPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYT 193
Query: 287 CFARNK------LG-----TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
C N LG + G + E PE G + C A+ +P
Sbjct: 194 CVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNP 253
Query: 336 SLKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
+I+W R +PI + R +SN L + + D+G Y C A+ A+
Sbjct: 254 V--PTIIWRRADGKPI--ARKARRHKSNGI-LEIPNFQQEDAGLYECVAENSRGKNVARG 308
Query: 395 TLT 397
LT
Sbjct: 309 QLT 311
Score = 41.2 bits (95), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 21/192 (10%)
Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
RG +GY+V+ W +D E + R+ I G T+T++ + V A+N A GP
Sbjct: 830 RGRIQGYEVKYWRHEDKEENARK-IRTVGNQTSTKITNLKGSVLYHLAVKAYNSAGTGPS 888
Query: 492 SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
S ++ T P PG + + S L W VK + GYK+ Y+ +
Sbjct: 889 SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNR 944
Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
+ + + TS +L+ L Y I + ++ GDG+ S+ + +P +
Sbjct: 945 QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIPKISN 994
Query: 606 DNVEGRGSTPNN 617
G G++ +N
Sbjct: 995 AYARGSGASTSN 1006
>sp|P28685|CNTN2_CHICK Contactin-2 OS=Gallus gallus GN=CNTN2 PE=1 SV=1
Length = 1036
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 175/633 (27%), Positives = 281/633 (44%), Gaps = 50/633 (7%)
Query: 45 ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLI-IKHVEFSDQGSY 102
AL + V L C G P+PQ W K DG + S+ + L+ I++V+F D+G+Y
Sbjct: 246 ALTGQMVTLECFAFGNPVPQIKWRKLDG------SQTSKWLSSEPLLHIQNVDFEDEGTY 299
Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
CE N G +Y + + A P + A + + C ASG P P + W+ +
Sbjct: 300 ECEAENIKGR-DTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRD 358
Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEIT 222
G+P++ R +V + L D+G Y C A N G VY + V A AP+
Sbjct: 359 GQPLAS---QNRIEVSGGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQALAPDFR 415
Query: 223 EAPKDEYTVDGKT--VVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
P ++ V++ C+ APK V W + LT R TI G L + +++
Sbjct: 416 LNPVKRLIPAARSGKVIIPCQPRAAPKATVLWTKGTELLTNSSRVTITADGTLILQNISK 475
Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKL 339
+D G+YTCFA N +G A +G L+V++ T IT P ++ G++ T +C+A DP++ L
Sbjct: 476 SDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGENLTLQCHASHDPTMDL 535
Query: 340 SIVWLRGSEPIDFE-SEPRF----VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
+ W PID + SE + V+ L + + SG+YTC AQT +D A
Sbjct: 536 TFTWSLDDFPIDLDKSEGHYRRASVKEAVGDLAIVNAQLKHSGRYTCTAQTVVDSTSESA 595
Query: 395 TLTVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHFRGYKVQTWTEKD 447
TLTV+ P P + + D +SW +P++ S+ R W +
Sbjct: 596 TLTVRGPPGPPGGVVVRDIGDT-TVQLSWSRGFDNHSPIARYSIEA--RTLLSNKWKQ-- 650
Query: 448 GEGSIRELIVN-KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
+R VN +G + T +V +P RVLA N G PS S + T E P
Sbjct: 651 ----MRTNPVNIEGNAETAQVVNLIPWMDYEFRVLASNILGVGEPSLPSSKIRTKEAAPT 706
Query: 506 TVQSLEAIPLGS-SAFYLKWVKP--EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
S G+ + + W + NG GY + ++ KGT+ G L R+P+ ++
Sbjct: 707 VAPSGLGGGGGAPNELIINWTPTLRDYQNGDGFGYILSFRK-KGTQ-GWLTARVPH-AES 763
Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGSTPNN 617
+ + P T + + + Y + G+G ES + Y P P V + +
Sbjct: 764 LHYVYRNESIGPYTPFEVKIKAYNRKGEGPESLTAIVYSAEEEPKVAPFRVTAKAVLSSE 823
Query: 618 LVISWTAMPEIEHNAPHFKYRI-FWRRHNTGEA 649
+ +SW + + + Y I +W+ + EA
Sbjct: 824 MDVSWEPVEQGDMTGVLLGYEIRYWKDGDKEEA 856
Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 152/370 (41%), Gaps = 30/370 (8%)
Query: 49 KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
+KV L C P W +G + + P R + G +I V+ D GSY C
Sbjct: 50 EKVTLTCRARANPPATYRWKMNGTELKMGPDSRY-RLVAGDLVISNPVKAKDAGSYQCVA 108
Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVHNGK 164
+N G S L F+ E + + E V F C P W+ N
Sbjct: 109 TNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEF 168
Query: 165 PISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYV---------- 212
P + P + RR V + I SD GNY C AT+ + ++ K V+
Sbjct: 169 P-NFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAE 227
Query: 213 NVLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD 271
+ +AP I + P D Y + G+ V L C FG P P++ W ++L G + + + +
Sbjct: 228 DARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKW----RKLDGSQTSKWLSSE 283
Query: 272 --LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
L I +V F D G Y C A N G G + + D D E + G + C
Sbjct: 284 PLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSC 343
Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
A P + ++ WLR +P+ ++ ++ + L +K DSG Y C A+ +
Sbjct: 344 VASGKP--RPAVRWLRDGQPLASQNR---IEVSGGELRFSKLVLEDSGMYQCVAENKHGT 398
Query: 390 IEAQATLTVQ 399
+ A A LTVQ
Sbjct: 399 VYASAELTVQ 408
Score = 92.8 bits (229), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 137/583 (23%), Positives = 228/583 (39%), Gaps = 72/583 (12%)
Query: 55 CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
C+ G P P W +DG P+ +RI G L + D G Y C N G
Sbjct: 343 CVASGKPRPAVRWLRDGQPLASQNRIEVS--GGELRFSKLVLEDSGMYQCVAENKHGTVY 400
Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
+ S +L+V A AP F + P I AA V C+ P+ + W + ++ +
Sbjct: 401 A-SAELTVQALAPDFRLNPVKRLIPAARSGKVIIPCQPRAAPKATVLWTKGTELLTNSS- 458
Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
R + + + ++N+ KSD G Y C A N +G ++V A +IT AP
Sbjct: 459 --RVTITADGTLILQNISKSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 515
Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKEL------TGGRY---TILE-TGDLKITDVAFA 280
G+ + L C P ++ + + + + G Y ++ E GDL I +
Sbjct: 516 NVGENLTLQCHASHDPTMDLTFTWSLDDFPIDLDKSEGHYRRASVKEAVGDLAIVNAQLK 575
Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
SG YTC A+ + + S +LTV+ ++ D +++LS
Sbjct: 576 HSGRYTCTAQTVVDSTSESATLTVRGPPGPPGGVVVRDI-------------GDTTVQLS 622
Query: 341 IVWLRGSE---PI-DFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE----- 391
W RG + PI + E R + SN + T ++ T + + +++
Sbjct: 623 --WSRGFDNHSPIARYSIEARTLLSNKWKQMRTNPVNIEGNAETAQVVNLIPWMDYEFRV 680
Query: 392 -AQATLTV--------------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFR 436
A L V P APS + +++W P G
Sbjct: 681 LASNILGVGEPSLPSSKIRTKEAAPTVAPSGLGGGGGA-PNELIINWTPTLRDYQNGDGF 739
Query: 437 GYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFV-PASKNFARVLAFNGAYNGPPSEII 495
GY + ++ +K +G + + + ++ + P + ++ A+N GP S
Sbjct: 740 GY-ILSFRKKGTQGWLTARVPHAESLHYVYRNESIGPYTPFEVKIKAYNRKGEGPESLTA 798
Query: 496 SFVTPEGVPGTVQ-SLEAIPLGSSAFYLKWVKPEQPN--GVLMGYKIKYQSVKGTKVGPL 552
+ E P + A + SS + W EQ + GVL+GY+I+Y K G
Sbjct: 799 IVYSAEEEPKVAPFRVTAKAVLSSEMDVSWEPVEQGDMTGVLLGYEIRYW-----KDGDK 853
Query: 553 LERLPYISDP-TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
E + TSA + GL P+TKY + + Y +AG G S
Sbjct: 854 EEAADRVRTAGLVTSAHVTGLNPNTKYHVSVRAYNRAGAGPPS 896
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 107/286 (37%), Gaps = 40/286 (13%)
Query: 126 PYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRI 182
P F +P F + EE VT C+A P W NG + P + R V + +
Sbjct: 32 PVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDLV 91
Query: 183 TIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR 241
++ D G+Y C ATN+ G V E + +D + +G V+ TC
Sbjct: 92 ISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTC- 150
Query: 242 VFGAPKPE-----VNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNK 292
+P P W+ N+ G R+ TG+L I +D G Y+CFA +
Sbjct: 151 ---SPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSH 207
Query: 293 LGTAQGSG-------SLTVKEHTHITDQ-----PEDYEVEAGQSATFRCNAVSDPSLKLS 340
+ S SL ++ P D GQ T C A +P ++
Sbjct: 208 IDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIK 267
Query: 341 IVWLRGSEPID-FESEPRF-VQSNDYSLTVTKSSELDSGQYTCRAQ 384
L GS+ SEP +Q+ D+ D G Y C A+
Sbjct: 268 WRKLDGSQTSKWLSSEPLLHIQNVDFE---------DEGTYECEAE 304
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 76/187 (40%), Gaps = 16/187 (8%)
Query: 216 AHAPEITEAPKDEYTVDGKT---VVLTCRVFGAPKPEVNWIHNQKELTGG---RYTILET 269
++ P E P +G V LTCR P W N EL G RY ++
Sbjct: 29 SYGPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLV-A 87
Query: 270 GDLKITD-VAFADSGEYTCFARNKLGTA-QGSGSLTVKEHTHITDQPED-YEVEAGQSAT 326
GDL I++ V D+G Y C A N GT SL + + D ++ G
Sbjct: 88 GDLVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVM 147
Query: 327 FRCNAVSDPSL--KLSIVWLRGSEPIDFESE-PRFVQSNDYSLTVTKSSELDSGQYTCRA 383
F C S P LS WL P ++ RFV +L + K+ D G Y+C A
Sbjct: 148 FTC---SPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFA 204
Query: 384 QTELDFI 390
+ +DFI
Sbjct: 205 TSHIDFI 211
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 4/144 (2%)
Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
P AP T V+ ++ V SW PV + G GY+++ W + D E + + + G
Sbjct: 807 PKVAPFRVTAKAVLSSEMDV-SWEPVEQGDMTGVLLGYEIRYWKDGDKEEAA-DRVRTAG 864
Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
T+ V P +K V A+N A GPPS + T + P + L S
Sbjct: 865 LVTSAHVTGLNPNTKYHVSVRAYNRAGAGPPSPSTNITTTKPPPRRPPGNISWTLTGSTV 924
Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
+KW V + + GYK+ Y+
Sbjct: 925 TIKWDPVVAQADESAVTGYKMLYR 948
>sp|Q8AXZ4|CNT1A_DANRE Contactin-1a OS=Danio rerio GN=cntn1a PE=2 SV=1
Length = 1032
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 189/721 (26%), Positives = 298/721 (41%), Gaps = 90/721 (12%)
Query: 24 ISASQNRHAPKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQ 82
I+ R P V AL + V L C G P+PQ W K DGV P R
Sbjct: 240 IAERSLRKYPADIKVKSPDSWALLGQNVTLECFALGNPIPQIRWRKLDGV--LPPLRHDV 297
Query: 83 GNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET 142
G L + +++ D+G Y CE N G+ + L V AP + E I+++E +
Sbjct: 298 SMSGALLHLYSLQYEDEGLYECEADNSKGK-DWHKTHLYVEGAPDWL---EQISSSEVDI 353
Query: 143 ---VTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNA 199
C+ASG P+P +H++ NG + + + L D+G Y C A
Sbjct: 354 GGDYIMSCQASGKPKPHVHFLKNGHMYMKG----------HEVRFSRLGFEDSGMYQCVA 403
Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKT--VVLTCRVFGAPKPEVNWIHNQK 257
N G ++ + + V A AP P + + VV CR AP+P + W +
Sbjct: 404 ENRHGVIHANAELRVFASAPSFQYNPVKPKLLGARNGRVVFECRPRAAPRPNITWSKGTE 463
Query: 258 EL-TGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
L R +I G L++ +++ +D G+YTCFA N G A +GSL++ + T IT P +
Sbjct: 464 LLHNSSRISIWLDGSLELLNISKSDEGKYTCFAENDRGRANSTGSLSITDATKITLAPSN 523
Query: 317 YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSEL-- 374
+V G+ A C A DP L L+ +W I+ + + + Q S + T SSEL
Sbjct: 524 ADVSVGEDARMECVASHDPGLDLTFIWSLDGHTINLQRDAQHYQRKMDSASGTSSSELLI 583
Query: 375 ------DSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSW----N 424
+G+Y+C AQT +D A A L V+ P P + +V V+ W +
Sbjct: 584 THTQLRHAGRYSCTAQTPVDNTTASAELVVRGPPGPPGGVRVDEVTSDSVRVL-WSHGTD 642
Query: 425 PVSPQSLRGHFRGYKVQ---TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 481
+SP S Y VQ + ++D + + +G + V +P ++ RV+
Sbjct: 643 NLSPISR------YTVQLRESAAQQDWRDAATSPVNVEGNAEMATVVNLLPWTEYEFRVI 696
Query: 482 AFNGAYNGPPSE------------IISFVTPEGVPGTVQSLEAI--PLGSSAFYLKWVKP 527
A N GPPSE I++ G GT + L P+ S +Y
Sbjct: 697 ATNTLGTGPPSEPSPKTTTREARPIVAPSDIGGGGGTSRELTITWTPVQSQYYY------ 750
Query: 528 EQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS--AKLAGLEPSTKYRIHLAGY 585
G GY I ++ P R+ ++DP K + PST++ + + +
Sbjct: 751 ----GSNFGYIIAFKPHND----PEWLRVT-VTDPEAQKYVHKDPKIPPSTRFEVKMKAF 801
Query: 586 TKAGDGAESKYLFY-----VPFKNPDNVEGRGSTPNNLVISW--TAMPEIEHNAPHFKYR 638
G+G S F VP + P E R + ++ W +P +E +Y+
Sbjct: 802 NSQGEGPFSNSAFIYSAQDVPAEAPIITEARALSATEAIVIWVPVQLPTVE------RYQ 855
Query: 639 I-FWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVN 697
+ +WR EA Q ++ R++ L N Y ++V G S R I
Sbjct: 856 VRYWRESVENEASAQRVLVSSRENHTRLDNMKPDSHYLVEVRACNGAGYGPASQRNRIYT 915
Query: 698 K 698
K
Sbjct: 916 K 916
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 149/412 (36%), Gaps = 69/412 (16%)
Query: 49 KKVELFCIFGGTPLPQTIWSKDGVPI------NPSDRISQGNYGKSLIIKHVEFSDQ-GS 101
+K+ L C P W + + +P +S+GN L+I + S G+
Sbjct: 64 EKITLTCRTRANPPASYRWRLNNAELVLAEGSDPHYSVSEGN----LLISSPDKSKHAGN 119
Query: 102 YTCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKAS-GLPEP-EIH 158
YTC SN G S + F T E E + E + C PE
Sbjct: 120 YTCVASNQYGSVTSRRARVQFGYLDMFSTDEREAVYVKEGQGAVLLCAPPPHFPEDLSFR 179
Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
W+ N P P + RR V + + I +R +D+GNY C ++ + K V+ +
Sbjct: 180 WMLNEFP-EFIPLDQRRFVSQSTGNLYISTVRSTDSGNYSCFVSSPA--IAKSVFSKFIP 236
Query: 217 HAP-----------EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
P +I D + + G+ V L C G P P++ W L R+
Sbjct: 237 LVPIAERSLRKYPADIKVKSPDSWALLGQNVTLECFALGNPIPQIRWRKLDGVLPPLRHD 296
Query: 266 ILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
+ +G L + + + D G Y C A N G L V+ +Q EV+ G
Sbjct: 297 VSMSGALLHLYSLQYEDEGLYECEADNSKGKDWHKTHLYVEGAPDWLEQISSSEVDIGGD 356
Query: 325 ATFRCNAVSDPS-----LKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQY 379
C A P LK ++++G E + ++ DSG Y
Sbjct: 357 YIMSCQASGKPKPHVHFLKNGHMYMKGHE-----------------VRFSRLGFEDSGMY 399
Query: 380 TCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSL 431
C A+ I A A L +V APS +NPV P+ L
Sbjct: 400 QCVAENRHGVIHANAEL--RVFASAPS--------------FQYNPVKPKLL 435
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 96/239 (40%), Gaps = 42/239 (17%)
Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHW-VHNGKPISQAPPNPRRKVGPNRITI 184
P T+ PE + EE +T C+ P W ++N + + +P V + I
Sbjct: 52 PLDTIYPE---ESPEEKITLTCRTRANPPASYRWRLNNAELVLAEGSDPHYSVSEGNLLI 108
Query: 185 ENLRKS-DTGNYGCNATNSLGYVYKDV------YVNVLAHAPEITEAPKDEYTVDGKTVV 237
+ KS GNY C A+N G V Y+++ + T+ + Y +G+ V
Sbjct: 109 SSPDKSKHAGNYTCVASNQYGSVTSRRARVQFGYLDMFS-----TDEREAVYVKEGQGAV 163
Query: 238 LTCRVFGAPKPEV------NWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTC 287
L C AP P W+ N+ L R+ TG+L I+ V DSG Y+C
Sbjct: 164 LLC----APPPHFPEDLSFRWMLNEFPEFIPLDQRRFVSQSTGNLYISTVRSTDSGNYSC 219
Query: 288 FARNKLGTAQGSGS----LTVKEHTHITDQPEDYEVEA-------GQSATFRCNAVSDP 335
F + A+ S L + P D +V++ GQ+ T C A+ +P
Sbjct: 220 FVSSP-AIAKSVFSKFIPLVPIAERSLRKYPADIKVKSPDSWALLGQNVTLECFALGNP 277
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 23/199 (11%)
Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK-DGEGSIRELIVN 458
VP EAP T + + A +A+V W PV ++ Y+V+ W E + E S + ++V+
Sbjct: 821 VPAEAPI-ITEARALSATEAIVIWVPVQLPTVER----YQVRYWRESVENEASAQRVLVS 875
Query: 459 KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE---IISFVTPEGVPGTVQSLEAIPL 515
E+ T +D P S V A NGA GP S+ I + +P P + S +
Sbjct: 876 SRENHT-RLDNMKPDSHYLVEVRACNGAGYGPASQRNRIYTKKSPPSRPPKIISTKMHYS 934
Query: 516 GSSAFYLKWVKPEQPN--GVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLE 573
G+S + W K E N + GYK+ Y+ G G L Y ++ + + E
Sbjct: 935 GTS-INIAWEKVESLNNESTVAGYKVLYRQ-HGQPSGTL-----YTTEKQSIDLPMRRGE 987
Query: 574 PSTKYRIHLAGYTKAGDGA 592
Y + + +++ GDGA
Sbjct: 988 ----YLVEVRAHSEGGDGA 1002
>sp|Q62845|CNTN4_RAT Contactin-4 OS=Rattus norvegicus GN=Cntn4 PE=1 SV=1
Length = 1026
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 191/733 (26%), Positives = 300/733 (40%), Gaps = 112/733 (15%)
Query: 45 ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
A + V+L C G P+P +W + DG PI R + + L I + + D GSY
Sbjct: 237 AEKGSTVKLECFALGNPVPTILWRRADGKPIARKARRHKSS--GILEIPNFQQEDAGSYE 294
Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
C N G+ + ++ A P + I+ A EE+V +ECKA+G P+P W+ NG
Sbjct: 295 CVAENSRGKNIAKG-QVTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNG 353
Query: 164 KPISQAPPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
P+ R ++ G ITI NL SD G Y C A N G +Y ++V+A +P
Sbjct: 354 DPLLT-----RERIQIEQGTLNITIVNL--SDAGMYQCVAENKHGVIYASAELSVIAESP 406
Query: 220 EITEAPKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITD 276
+ + T+ G VV+ C+ +P+P W ++ L R TI E G+L+I +
Sbjct: 407 DFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIIN 466
Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
V +D+G YTC A N GTA +G++ VK+ T + P +V G+S C D S
Sbjct: 467 VTKSDAGSYTCIATNHFGTASSTGNVVVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHS 526
Query: 337 LKLSIVWLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
L + W IDF+ + Q + L + +G+Y C QT +D +
Sbjct: 527 LDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLS 586
Query: 392 AQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK- 446
A A L V+ P P T+ ++ D A +SW P SP ++ Y +Q T
Sbjct: 587 AAADLIVRGPPGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFS 639
Query: 447 ---DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EI 494
++ EL+ G++ T V P + R +A N G PS E
Sbjct: 640 VGWQAVSTVPELV--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEA 697
Query: 495 ISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPL 552
+ VTP V G S S + W V E NG GY + ++ G +
Sbjct: 698 LPEVTPANVSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFR-----PHGKM 745
Query: 553 LERLPYI--SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNP 605
+ L + +D + + + P + + + + + G+G S L Y P K P
Sbjct: 746 IWMLTVLASADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTLVYSAEEEPTKPP 805
Query: 606 DNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVL 665
++ R + ++ + W A P +
Sbjct: 806 ASIFARSLSATDIEVFW-ASP-------------------------------------IG 827
Query: 666 ANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 725
N+ Q YE+K W D E + R+ I G T+T++ + V A+N A
Sbjct: 828 KNRGRIQGYEVKY---WRHDDKEENARK-IRTVGNQTSTKITNLKGNALYHLSVKAYNSA 883
Query: 726 YNGPPSEIISFVT 738
GP S ++ T
Sbjct: 884 GTGPSSAAVNVTT 896
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 175/687 (25%), Positives = 260/687 (37%), Gaps = 103/687 (14%)
Query: 88 SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
+L I VE +D G+YTC V+N V + ++ P V+ PE + A
Sbjct: 178 NLYIAKVEKADVGNYTCVVTNTVTSHQVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPA 237
Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
+ TV EC A G P P I W +GKPI++ RR + I N ++ D G+Y
Sbjct: 238 EKGSTVKLECFALGNPVPTILWRRADGKPIAR---KARRHKSSGILEIPNFQQEDAGSYE 294
Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
C A NS G V A P + D + ++V C+ G PKP W+ N
Sbjct: 295 CVAENSRGKNIAKGQVTFYAQ-PNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNG 353
Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
L +E G L IT V +D+G Y C A NK G S L+V I + P+
Sbjct: 354 DPLLTRERIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIYASAELSV-----IAESPDF 408
Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
V+ G C + P + W +G E I E+E R S D +L +
Sbjct: 409 SRTLLKRVTLVKVGGEVVIECKPKASP--RPVYTWRKGRE-ILRENE-RITISEDGNLRI 464
Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
++ D+G YTC A + + V+ P + + + V + V+
Sbjct: 465 INVTKSDAGSYTCIATNHFGTASSTGNVVVKDPTKVMVPPSSMDVTVGESIVLPCQVTHD 524
Query: 429 QSLRGHFRGYKVQTWT--------EKD--------GEGSIRELIVNKGE---------ST 463
SL F TWT +KD G+ S +L++ +
Sbjct: 525 HSLDIVF------TWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMV 578
Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYL 522
T VDK A+ R GPP + E T Q S P S +
Sbjct: 579 QTSVDKLSAAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITM 629
Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
++ P + + +Q+V +P + D T +A + GL P +Y
Sbjct: 630 YVIQARTP------FSVGWQAVS---------TVPELVDGKTFTATVVGLNPWVEYEFRT 674
Query: 583 AGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
G G S + +P P NV G G + + LVI+W +PE N F
Sbjct: 675 VAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFG 734
Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL 694
Y + +R H W + S V N+ F P+E+KV + +G S L
Sbjct: 735 YVVAFRPHGK-MIWMLTVLASADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTL 793
Query: 695 IVNKGESTTTEVDKFVPASKNFARVLA 721
+ + E T P + FAR L+
Sbjct: 794 VYSAEEEPTK------PPASIFARSLS 814
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 142/369 (38%), Gaps = 30/369 (8%)
Query: 49 KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
KKV+L C G P P W +G ++ SL+I + + D G+Y C +
Sbjct: 44 KKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDSGTYQCIAT 103
Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVHN 162
N G S L F T ++ + + C G P E W+ N
Sbjct: 104 NSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLC---GPPPHSGELSYAWIFN 160
Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN- 213
P Q + RR V + I + K+D GNY C TN+ LG + N
Sbjct: 161 EHPSYQ---DNRRFVSQETGNLYIAKVEKADVGNYTCVVTNTVTSHQVLGPPTPLILRND 217
Query: 214 --VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILET 269
+ + P+I + P+ G TV L C G P P + W + K + +
Sbjct: 218 GVMGEYEPKIEVQFPETVPAEKGSTVKLECFALGNPVPTILWRRADGKPIARKARRHKSS 277
Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
G L+I + D+G Y C A N G G +T + D V +S + C
Sbjct: 278 GILEIPNFQQEDAGSYECVAENSRGKNIAKGQVTFYAQPNWVQIINDIHVAMEESVFWEC 337
Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
A P K + WL+ +P+ +Q +L +T + D+G Y C A+ +
Sbjct: 338 KANGRP--KPTYRWLKNGDPLLTRER---IQIEQGTLNITIVNLSDAGMYQCVAENKHGV 392
Query: 390 IEAQATLTV 398
I A A L+V
Sbjct: 393 IYASAELSV 401
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 115/290 (39%), Gaps = 34/290 (11%)
Query: 119 DLSVLAAPYFTVEPEFIN---AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
D L P F EP + +EE+ V C+ G P+P I W NG + + R
Sbjct: 19 DDYTLHGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGM-DFRY 77
Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVD-G 233
V + I N K+ D+G Y C ATNS G + A+ + +V G
Sbjct: 78 SVVEGSLLINNPNKTQDSGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRG 137
Query: 234 KTVVLTCRVFGAPKPEVN-----WIHNQKE--LTGGRYTILETGDLKITDVAFADSGEYT 286
+ +VL C P P WI N+ R+ ETG+L I V AD G YT
Sbjct: 138 QGMVLLC----GPPPHSGELSYAWIFNEHPSYQDNRRFVSQETGNLYIAKVEKADVGNYT 193
Query: 287 CFARNKLGTAQ-----------GSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
C N + + Q G + E PE E G + C A+ +P
Sbjct: 194 CVVTNTVTSHQVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGSTVKLECFALGNP 253
Query: 336 SLKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
+I+W R +PI ++ R +S+ L + + D+G Y C A+
Sbjct: 254 V--PTILWRRADGKPIARKA--RRHKSSGI-LEIPNFQQEDAGSYECVAE 298
Score = 41.6 bits (96), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 21/192 (10%)
Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
RG +GY+V+ W D E + R+ I G T+T++ + V A+N A GP
Sbjct: 830 RGRIQGYEVKYWRHDDKEENARK-IRTVGNQTSTKITNLKGNALYHLSVKAYNSAGTGPS 888
Query: 492 SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
S ++ T P PG + + S L W VK + GYK+ Y+ +
Sbjct: 889 SAAVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNR 944
Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
+ + + TS +L+ L Y I + ++ GDG+ S+ + +P +
Sbjct: 945 QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIPKISN 994
Query: 606 DNVEGRGSTPNN 617
G G++ +N
Sbjct: 995 SYARGSGASTSN 1006
>sp|Q62682|CNTN3_RAT Contactin-3 OS=Rattus norvegicus GN=Cntn3 PE=1 SV=1
Length = 1028
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 170/628 (27%), Positives = 266/628 (42%), Gaps = 42/628 (6%)
Query: 45 ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
A + V+L C G P+PQ W + DG+P +I + L I + + D GSY
Sbjct: 239 AAKGSTVKLECFALGNPVPQINWRRSDGMPF--PTKIKLRKFNGVLEIPNFQQEDTGSYE 296
Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
C N G+ + L+ A PY+ + + A E+++ +EC+ASG P+P W+ NG
Sbjct: 297 CIAENSRGKNVARG-RLTYYAKPYWVQLLKDVETAVEDSLYWECRASGKPKPSYRWLKNG 355
Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
+ R ++ +TI NL SD+G + C A N G +Y + VLA AP+ +
Sbjct: 356 DALVL---EERIQIENGALTIANLNVSDSGMFQCIAENKHGLIYSSAELKVLASAPDFSR 412
Query: 224 APKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
P + G V+L C+ +P+ W + R ++L G LKI +V A
Sbjct: 413 NPMKKMIQVQVGSLVILDCKPSASPRALSFWKKGDTVVREQARISLLNDGGLKIMNVTKA 472
Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
D+G YTC A N+ G A G+ L V E T I P + +V G+S C DP L +
Sbjct: 473 DAGIYTCIAENQFGKANGTTQLVVTEPTRIILAPSNMDVAVGESIILPCQVQHDPLLDIM 532
Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
W DF+ + + S+ L + SG+Y C QT +D + + A L
Sbjct: 533 FAWYFNGTLTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAAEL 592
Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKD-GEGSIR 453
V+ P N + ++ D A +SW + H Y VQ T G ++R
Sbjct: 593 IVRGSPGPPENVKVDEITDT-TAQLSWT----EGTDSHSPVISYAVQARTPFSVGWQNVR 647
Query: 454 ---ELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQS 509
E I G++ T V + P + RV+A N G PS V T E P S
Sbjct: 648 TVPEAI--DGKTRTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAAPEVAPS 705
Query: 510 LEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 566
+ GS S + W V E NG GY + ++ + V ++ + D
Sbjct: 706 EVSGGGGSRSELVITWDPVPEELQNGGGFGYVVAFRPL---GVTTWIQTVVTSPDNPRYV 762
Query: 567 AKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNNLVIS 621
+ + P + Y + + Y G+G S +F P P ++ + + + +S
Sbjct: 763 FRNESIVPFSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVS 822
Query: 622 WTAMPEIEHNAPHFKYRI-FWRRHNTGE 648
W +P N Y + +W +N GE
Sbjct: 823 WNTIPWKSSNGRLLGYEVRYW--NNGGE 848
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 162/625 (25%), Positives = 244/625 (39%), Gaps = 62/625 (9%)
Query: 89 LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE----------------- 131
L I VE SD G+YTC V++ V A+ VL +P V
Sbjct: 181 LYIAKVEPSDVGNYTCVVTSTVTNAR-------VLGSPTPLVLRSDGVMGEYEPKIELQF 233
Query: 132 PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKS 190
PE + AA+ TV EC A G P P+I+W +G P P + + + I N ++
Sbjct: 234 PETLPAAKGSTVKLECFALGNPVPQINWRRSDGMPF---PTKIKLRKFNGVLEIPNFQQE 290
Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKP 248
DTG+Y C A NS G K+V L + P + KD T ++ CR G PKP
Sbjct: 291 DTGSYECIAENSRG---KNVARGRLTYYAKPYWVQLLKDVETAVEDSLYWECRASGKPKP 347
Query: 249 EVNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT 308
W+ N L +E G L I ++ +DSG + C A NK G S L V
Sbjct: 348 SYRWLKNGDALVLEERIQIENGALTIANLNVSDSGMFQCIAENKHGLIYSSAELKVLASA 407
Query: 309 -HITDQP--EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
+ P + +V+ G C + P LS W +G + + R ND
Sbjct: 408 PDFSRNPMKKMIQVQVGSLVILDCKPSASPR-ALSF-WKKGDTVV--REQARISLLNDGG 463
Query: 366 LTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVS 422
L + ++ D+G YTC A+ + L V P + APSN + V + ++
Sbjct: 464 LKIMNVTKADAGIYTCIAENQFGKANGTTQLVVTEPTRIILAPSN---MDVAVGESIILP 520
Query: 423 WNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLA 482
L F Y T T+ +GS E + G S+ + + + + V
Sbjct: 521 CQVQHDPLLDIMFAWYFNGTLTDFKKDGSHFEKV--GGSSSGDLMIRNIQLKHSGKYVCM 578
Query: 483 FNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQ 542
+ S V G PG ++++ + + L W + + ++ Y + Q
Sbjct: 579 VQTGVDSVSSAAELIV--RGSPGPPENVKVDEITDTTAQLSWTEGTDSHSPVISYAV--Q 634
Query: 543 SVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------K 595
+ VG + +P D T +A + L P +Y + K G G S +
Sbjct: 635 ARTPFSVGWQNVRTVPEAIDGKTRTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVR 694
Query: 596 YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDV 655
P P V G G + + LVI+W +PE N F Y + +R W Q V
Sbjct: 695 TEEAAPEVAPSEVSGGGGSRSELVITWDPVPEELQNGGGFGYVVAFRPLGV-TTWIQTVV 753
Query: 656 LDWRQSELVLANQPT--FQPYEIKV 678
V N+ F PYE+KV
Sbjct: 754 TSPDNPRYVFRNESIVPFSPYEVKV 778
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 168/730 (23%), Positives = 276/730 (37%), Gaps = 108/730 (14%)
Query: 55 CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
C G P P W K+G + +RI N +L I ++ SD G + C N G
Sbjct: 339 CRASGKPKPSYRWLKNGDALVLEERIQIEN--GALTIANLNVSDSGMFQCIAENKHGLIY 396
Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
S S +L VLA AP F+ P + I V +CK S P W + +
Sbjct: 397 S-SAELKVLASAPDFSRNPMKKMIQVQVGSLVILDCKPSASPRALSFWKKGDTVVREQAR 455
Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
G + I N+ K+D G Y C A N G + V+ I AP +
Sbjct: 456 ISLLNDG--GLKIMNVTKADAGIYTCIAENQFGKANGTTQL-VVTEPTRIILAPSNMDVA 512
Query: 232 DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
G++++L C+V P ++ W N E GG +GDL I ++
Sbjct: 513 VGESIILPCQVQHDPLLDIMFAWYFNGTLTDFKKDGSHFEKVGGS----SSGDLMIRNIQ 568
Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
SG+Y C + + + + L V+ PE+ +V+ ++D + +
Sbjct: 569 LKHSGKYVCMVQTGVDSVSSAAELIVRGSP---GPPENVKVDE----------ITDTTAQ 615
Query: 339 LSIVWLRGSEP----IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
LS W G++ I + + R S + T +D T ++E +
Sbjct: 616 LS--WTEGTDSHSPVISYAVQARTPFSVGWQNVRTVPEAIDGKTRTATVVELNPWVEYEF 673
Query: 395 TLTVQ--------------------VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRG- 433
+ P APS + + V++W+PV P+ L+
Sbjct: 674 RVVASNKIGGGEPSLPSEKVRTEEAAPEVAPSEVSGGGG-SRSELVITWDPV-PEELQNG 731
Query: 434 -------HFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 486
FR V TW + V + ES VP S +V +N
Sbjct: 732 GGFGYVVAFRPLGVTTWIQTVVTSPDNPRYVFRNES-------IVPFSPYEVKVGVYNNK 784
Query: 487 YNGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQS 543
GP S + + + E P S + A L SS + W + + NG L+GY+++Y +
Sbjct: 785 GEGPFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVSWNTIPWKSSNGRLLGYEVRYWN 844
Query: 544 VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV--- 600
G + ++ TSA L GL+ + Y + Y AG G S +
Sbjct: 845 NGGEEESSSKVKVA----GNQTSAVLRGLKSNLAYYTAVRAYNTAGAGPFSATVNATTKK 900
Query: 601 --PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDW 658
P + P NV +T ++++W + +E+ + Y++F+R + N VL+
Sbjct: 901 TPPSQPPGNVVWN-ATDTKVLLNWEQVKALENESEVTGYKVFYRTSSQ----NNVQVLNT 955
Query: 659 RQ--SELVLANQPTFQPYEIKVVQTWTEKDGEGS----IRELIVNKGESTTTEVDKFVPA 712
+ +EL+L P + Y I+V T DG S I + +T+ + P
Sbjct: 956 NKTSAELLL---PIKEDYIIEVKATTDGGDGTSSEQIRIPRITSMDARGSTSAISDIHPV 1012
Query: 713 SKNFARVLAF 722
S + +L F
Sbjct: 1013 SGYISVLLFF 1022
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 163/414 (39%), Gaps = 38/414 (9%)
Query: 44 VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFSDQGSY 102
V +KK+ L C G P P W +G I+ S D + N G ++I D GSY
Sbjct: 39 VGSEDKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLNGGNLIVINPNRNWDTGSY 98
Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEF-INAAEEETVTFECKASGLP----EPEI 157
C +N +G S L F ++ E + V C G P E
Sbjct: 99 QCFATNSLGTIVSREAKLQFAYLENFKSRMRSRVSVREGQGVVLLC---GPPPHSGELSY 155
Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDVYVN 213
WV N P S + RR V + I + SD GNY C T+++ V
Sbjct: 156 AWVFNEYP-SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNARVLGSPTPL 214
Query: 214 VL-------AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
VL + P+I + P+ G TV L C G P P++NW + +
Sbjct: 215 VLRSDGVMGEYEPKIELQFPETLPAAKGSTVKLECFALGNPVPQINWRRSDGMPFPTKIK 274
Query: 266 ILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
+ + G L+I + D+G Y C A N G G LT + +D E S
Sbjct: 275 LRKFNGVLEIPNFQQEDTGSYECIAENSRGKNVARGRLTYYAKPYWVQLLKDVETAVEDS 334
Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
+ C A P K S WL+ + + E +Q + +LT+ + DSG + C A+
Sbjct: 335 LYWECRASGKP--KPSYRWLKNGDALVLEER---IQIENGALTIANLNVSDSGMFQCIAE 389
Query: 385 TELDFIEAQATLTVQVPLEAPSNFT------LIQVIDAKKAVVSWNP-VSPQSL 431
+ I + A L V L + +F+ +IQV ++ P SP++L
Sbjct: 390 NKHGLIYSSAELKV---LASAPDFSRNPMKKMIQVQVGSLVILDCKPSASPRAL 440
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 125/300 (41%), Gaps = 32/300 (10%)
Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
+L P F EP F +E++ +T C+A G P P W NG I + + + G
Sbjct: 22 LLQGPVFVKEPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLNG 81
Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
N I I R DTG+Y C ATNSLG + A+ + +V +G+ VV
Sbjct: 82 GNLIVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKSRMRSRVSVREGQGVV 141
Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
L C P P W+ N+ E R+ ETG L I V +D G YTC
Sbjct: 142 LLC----GPPPHSGELSYAWVFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCV 197
Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
+ + A+ GS L ++ + + PE G + C A+ +P
Sbjct: 198 VTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIELQFPETLPAAKGSTVKLECFALGNPVP 257
Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
+++ W R S+ + F ++ + + N L + + D+G Y C A+ A+ LT
Sbjct: 258 QIN--WRR-SDGMPFPTKIKLRKFNGV-LEIPNFQQEDTGSYECIAENSRGKNVARGRLT 313
>sp|Q9P232|CNTN3_HUMAN Contactin-3 OS=Homo sapiens GN=CNTN3 PE=1 SV=3
Length = 1028
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 167/625 (26%), Positives = 267/625 (42%), Gaps = 48/625 (7%)
Query: 45 ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
A + V+L C G P+PQ W + DG+P S +I + L I + + D GSY
Sbjct: 239 AAKGSTVKLECFALGNPIPQINWRRSDGLPF--SSKIKLRKFSGVLEIPNFQQEDAGSYE 296
Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
C N G+ + L+ A P++ + + A E+++ +EC+ASG P+P W+ NG
Sbjct: 297 CIAENSRGKNVARG-RLTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYRWLKNG 355
Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
+ R ++ +TI NL +D+G + C A N G VY + V+A AP+ ++
Sbjct: 356 AALVL---EERTQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSK 412
Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITDVAFA 280
P + G V L C+ +P+ +W + R ++L G LKI +V A
Sbjct: 413 NPMKKLVQVQVGSLVSLDCKPRASPRALSSWKKGDVSVQEHERISLLNDGGLKIANVTKA 472
Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
D+G YTC A N+ G A G+ L V E T IT P + +V G+S C DP L +
Sbjct: 473 DAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDII 532
Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
W DF+ + + S+ L + SG+Y C QT +D + + A L
Sbjct: 533 FTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADL 592
Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSW-------NPVSPQSLRGHF---RGYKVQTWTEK 446
V+ P N + ++ D A +SW +PV S++ G++ T
Sbjct: 593 IVRGSPGPPENVKVDEITDT-TAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT---- 647
Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPG 505
++ E+I G++ T V + P + RV+A N G PS V T E VP
Sbjct: 648 ----TVPEVI--DGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701
Query: 506 TVQSLEAIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 562
S GS S + W V E NG GY + ++ + V ++ + D
Sbjct: 702 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPL---GVTTWIQTVVTSPDT 758
Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNN 617
+ + P + Y + + Y G+G S +F P P V + +
Sbjct: 759 PRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSE 818
Query: 618 LVISWTAMPEIEHNAPHFKYRI-FW 641
+ +SW +P N Y + +W
Sbjct: 819 IEVSWNTIPWKLSNGHLLGYEVRYW 843
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 157/618 (25%), Positives = 243/618 (39%), Gaps = 48/618 (7%)
Query: 89 LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
L I VE SD G+YTC V++ V A+ ++ P V+ PE + AA
Sbjct: 181 LYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 240
Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
+ TV EC A G P P+I+W +G P S + + + I N ++ D G+Y C
Sbjct: 241 KGSTVKLECFALGNPIPQINWRRSDGLPFSS---KIKLRKFSGVLEIPNFQQEDAGSYEC 297
Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
A NS G K+V L + P + KD ++ CR G PKP W+ N
Sbjct: 298 IAENSRG---KNVARGRLTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYRWLKN 354
Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
L T +E G L I++++ DSG + C A NK G S L V + P
Sbjct: 355 GAALVLEERTQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNP 414
Query: 315 ED--YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
+V+ G + C + P S W +G + + R ND L + +
Sbjct: 415 MKKLVQVQVGSLVSLDCKPRASPRALSS--WKKGD--VSVQEHERISLLNDGGLKIANVT 470
Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVPLE---APSNFTLIQVIDAKKAVVSWNPVSPQ 429
+ D+G YTC A+ + L V P APSN + V + ++
Sbjct: 471 KADAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSN---MDVSVGESVILPCQVQHDP 527
Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
L F Y + +GS E + G S+ + + + + V +
Sbjct: 528 LLDIIFTWYFNGALADFKKDGSHFEKV--GGSSSGDLMIRNIQLKHSGKYVCMVQTGVDS 585
Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKV 549
S V G PG ++++ + + L W + + + ++ Y I Q+ V
Sbjct: 586 VSSAADLIV--RGSPGPPENVKVDEITDTTAQLSWKEGKDNHSPVISYSI--QARTPFSV 641
Query: 550 G-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------KYLFYVPF 602
G + +P + D T +A + L P +Y + K G G S + VP
Sbjct: 642 GWQTVTTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE 701
Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
P V G G + + LVI+W +PE N F Y + +R W Q V
Sbjct: 702 VPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGV-TTWIQTVVTSPDTPR 760
Query: 663 LVLANQPT--FQPYEIKV 678
V N+ + PYE+KV
Sbjct: 761 YVFRNESIVPYSPYEVKV 778
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 166/727 (22%), Positives = 274/727 (37%), Gaps = 106/727 (14%)
Query: 55 CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
C G P P W K+G + +R N +L I ++ +D G + C N G
Sbjct: 339 CRASGKPKPSYRWLKNGAALVLEERTQIEN--GALTISNLSVTDSGMFQCIAENKHGLVY 396
Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
S S +L V+A AP F+ P + + V+ +CK P W + +
Sbjct: 397 S-SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRALSSWKKGDVSVQEHER 455
Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
G + I N+ K+D G Y C A N G ++ V+ IT AP +
Sbjct: 456 ISLLNDG--GLKIANVTKADAGTYTCMAENQFGKANGTTHL-VVTEPTRITLAPSNMDVS 512
Query: 232 DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
G++V+L C+V P ++ W N E GG +GDL I ++
Sbjct: 513 VGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGS----SSGDLMIRNIQ 568
Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
SG+Y C + + + + L V+ G + + ++D + +
Sbjct: 569 LKHSGKYVCMVQTGVDSVSSAADLIVRG-------------SPGPPENVKVDEITDTTAQ 615
Query: 339 LSIVWLRG----SEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELD------ 388
LS W G S I + + R S + TVT E+ G+ EL+
Sbjct: 616 LS--WKEGKDNHSPVISYSIQARTPFSVGWQ-TVTTVPEVIDGKTHTATVVELNPWVEYE 672
Query: 389 --------------FIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH 434
+ ++ T + E P + + V++W+PV + G
Sbjct: 673 FRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGE 732
Query: 435 -------FRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
FR V TW + V + ES VP S +V +N
Sbjct: 733 GFGYVVAFRPLGVTTWIQTVVTSPDTPRYVFRNES-------IVPYSPYEVKVGVYNNKG 785
Query: 488 NGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSV 544
GP S + + + E P S + A L SS + W + + NG L+GY+++Y +
Sbjct: 786 EGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNG 845
Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
G + ++ TSA+L GL+ + Y + Y AG G S +
Sbjct: 846 GGKEESSSKMKVA----GNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSATVNVTTKKT 901
Query: 601 -PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
P + P NV +T ++++W + +E+ + Y++F+R + N VL+
Sbjct: 902 PPSQPPGNVVWN-ATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQ----NNVQVLNTN 956
Query: 660 Q--SELVLANQPTFQPYEIKVVQTWTEKDGEGS----IRELIVNKGESTTTEVDKFVPAS 713
+ +ELVL P + Y I+V T DG S I + +T+ + P S
Sbjct: 957 KTSAELVL---PIKEDYIIEVKATTDGGDGTSSEQIRIPRITSMDARGSTSAISNVHPMS 1013
Query: 714 KNFARVL 720
VL
Sbjct: 1014 SYMPIVL 1020
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 147/374 (39%), Gaps = 28/374 (7%)
Query: 44 VALRNKKVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFSDQGSY 102
V +KK+ L C G P P W +G I+ S + + N G ++I D G+Y
Sbjct: 39 VGSEDKKITLHCEARGNPSPHYRWQLNGSDIDMSMEHRYKLNGGNLVVINPNRNWDTGTY 98
Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEI 157
C +N +G S L F T ++ E + V C G P E
Sbjct: 99 QCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLC---GPPPHSGELSY 155
Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSL--GYVYKDVYVN 213
W+ N P S + RR V + I + SD GNY C T+ + V
Sbjct: 156 AWIFNEYP-SFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPL 214
Query: 214 VL-------AHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
VL + P+I + P+ G TV L C G P P++NW + +
Sbjct: 215 VLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIK 274
Query: 266 ILE-TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
+ + +G L+I + D+G Y C A N G G LT H +D E+ S
Sbjct: 275 LRKFSGVLEIPNFQQEDAGSYECIAENSRGKNVARGRLTYYAKPHWVQLIKDVEIAVEDS 334
Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
+ C A P K S WL+ + E Q + +LT++ S DSG + C A+
Sbjct: 335 LYWECRASGKP--KPSYRWLKNGAALVLEER---TQIENGALTISNLSVTDSGMFQCIAE 389
Query: 385 TELDFIEAQATLTV 398
+ + + A L V
Sbjct: 390 NKHGLVYSSAELKV 403
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 125/300 (41%), Gaps = 32/300 (10%)
Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
+L P F EP F +E++ +T C+A G P P W NG I + + + G
Sbjct: 22 LLQGPVFIKEPSNSIFPVGSEDKKITLHCEARGNPSPHYRWQLNGSDIDMSMEHRYKLNG 81
Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
N + I R DTG Y C ATNSLG + A+ + +V +G+ VV
Sbjct: 82 GNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVV 141
Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
L C P P WI N+ E R+ ETG L I+ V +D G YTC
Sbjct: 142 LLC----GPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCV 197
Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
+ + A+ GS L ++ + + PE G + C A+ +P
Sbjct: 198 VTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIP 257
Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
+++ W R S+ + F S+ + + + L + + D+G Y C A+ A+ LT
Sbjct: 258 QIN--WRR-SDGLPFSSKIKLRKFSGV-LEIPNFQQEDAGSYECIAENSRGKNVARGRLT 313
>sp|Q07409|CNTN3_MOUSE Contactin-3 OS=Mus musculus GN=Cntn3 PE=2 SV=2
Length = 1028
Score = 174 bits (441), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 167/626 (26%), Positives = 265/626 (42%), Gaps = 38/626 (6%)
Query: 45 ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
A + V L C G P+PQ W + DG+P ++I + L I++ + D GSY
Sbjct: 239 AAKGSTVRLECFALGNPVPQINWRRSDGMPF--PNKIKLRKFNGMLEIQNFQQEDTGSYE 296
Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
C N G+ + L+ A PY+ + A E+++ +EC+ASG P+P W+ NG
Sbjct: 297 CIAENSRGKNVARG-RLTYYAKPYWLQLLRDVEIAVEDSLYWECRASGKPKPSYRWLKNG 355
Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
+ R ++ +TI NL +D+G + C A N G +Y + V+A AP+ +
Sbjct: 356 DALVL---EERIQIENGALTITNLNVTDSGMFQCIAENKHGLIYSSAELKVVASAPDFSR 412
Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
P + G V+L C+ +P+ W + R + L G LKI +V A
Sbjct: 413 NPMKKMVQVQVGSLVILDCKPRASPRALSFWKKGDMMVREQARVSFLNDGGLKIMNVTKA 472
Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
D+G YTC A N+ G A G+ L V E T I P + +V G+S C DP L +
Sbjct: 473 DAGTYTCTAENQFGKANGTTHLVVTEPTRIILAPSNMDVAVGESVILPCQVQHDPLLDIM 532
Query: 341 IVWLRGSEPIDFESEPRFVQ----SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
W DF+ + + S+ L + SG+Y C QT +D + + A L
Sbjct: 533 FAWYFNGALTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAAEL 592
Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKD-GEGSIR 453
V+ P N + ++ D A +SW + H Y VQ T G S+R
Sbjct: 593 IVRGSPGPPENVKVDEITDT-TAQLSWT----EGTDSHSPVISYAVQARTPFSVGWQSVR 647
Query: 454 ELI-VNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLE 511
+ V G++ T V + P + R++A N G PS V T E P S
Sbjct: 648 TVPEVIDGKTHTATVVELNPWVEYEFRIVASNKIGGGEPSLPSEKVRTEEAAPEIAPSEV 707
Query: 512 AIPLGS-SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
+ GS S + W V E NG GY + ++ + V ++ + D +
Sbjct: 708 SGGGGSRSELVITWDPVPEELQNGGGFGYVVAFRPL---GVTTWIQTVVTSPDNPRYVFR 764
Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESKY--LFYV---PFKNPDNVEGRGSTPNNLVISWT 623
+ P + Y + + Y G+G S +F P P ++ + + + +SW
Sbjct: 765 NESIVPFSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVSWN 824
Query: 624 AMPEIEHNAPHFKYRI-FWRRHNTGE 648
+P N Y + +W +N GE
Sbjct: 825 TIPWKLSNGHLLGYEVRYW--NNGGE 848
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 157/625 (25%), Positives = 246/625 (39%), Gaps = 62/625 (9%)
Query: 89 LIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINAA 138
L I VE SD G+YTC V++ V + ++ P V+ PE + AA
Sbjct: 181 LYIAKVEPSDVGNYTCVVTSTVTNTRVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA 240
Query: 139 EEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
+ TV EC A G P P+I+W +G P P + + + I+N ++ DTG+Y C
Sbjct: 241 KGSTVRLECFALGNPVPQINWRRSDGMPF---PNKIKLRKFNGMLEIQNFQQEDTGSYEC 297
Query: 198 NATNSLGYVYKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHN 255
A NS G K+V L + P + +D ++ CR G PKP W+ N
Sbjct: 298 IAENSRG---KNVARGRLTYYAKPYWLQLLRDVEIAVEDSLYWECRASGKPKPSYRWLKN 354
Query: 256 QKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSL-TVKEHTHITDQP 314
L +E G L IT++ DSG + C A NK G S L V + P
Sbjct: 355 GDALVLEERIQIENGALTITNLNVTDSGMFQCIAENKHGLIYSSAELKVVASAPDFSRNP 414
Query: 315 --EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSS 372
+ +V+ G C + P LS W +G + ++ F+ ND L + +
Sbjct: 415 MKKMVQVQVGSLVILDCKPRASPR-ALSF-WKKGDMMVREQARVSFL--NDGGLKIMNVT 470
Query: 373 ELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDAKKAVVSWNPVSPQ 429
+ D+G YTC A+ + L V P + APSN + V + ++
Sbjct: 471 KADAGTYTCTAENQFGKANGTTHLVVTEPTRIILAPSN---MDVAVGESVILPCQVQHDP 527
Query: 430 SLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNG 489
L F Y T+ +GS E + G S+ + + + + V +
Sbjct: 528 LLDIMFAWYFNGALTDFKKDGSHFEKV--GGSSSGDLMIRNIQLKHSGKYVCMVQTGVDS 585
Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK--------Y 541
S V G PG ++++ + + L W + + ++ Y ++ +
Sbjct: 586 VSSAAELIV--RGSPGPPENVKVDEITDTTAQLSWTEGTDSHSPVISYAVQARTPFSVGW 643
Query: 542 QSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES------K 595
QSV+ +P + D T +A + L P +Y + K G G S +
Sbjct: 644 QSVR---------TVPEVIDGKTHTATVVELNPWVEYEFRIVASNKIGGGEPSLPSEKVR 694
Query: 596 YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDV 655
P P V G G + + LVI+W +PE N F Y + +R W Q V
Sbjct: 695 TEEAAPEIAPSEVSGGGGSRSELVITWDPVPEELQNGGGFGYVVAFRPLGV-TTWIQTVV 753
Query: 656 LDWRQSELVLANQPT--FQPYEIKV 678
V N+ F PYE+KV
Sbjct: 754 TSPDNPRYVFRNESIVPFSPYEVKV 778
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 149/371 (40%), Gaps = 30/371 (8%)
Query: 48 NKKVELFCIFGGTPLPQTIWSKDGVPINPS-DRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
+KK+ L C G P P W +G I+ S D + N G ++I D GSY C
Sbjct: 43 DKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLNGGNLIVINPNRNWDTGSYQCFA 102
Query: 107 SNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVH 161
+N +G S L F T ++ E + V C G P E WV
Sbjct: 103 TNSLGTIVSREAKLQFAYLENFKTRMRSTVSVREGQGVVLLC---GPPPHSGELSYAWVF 159
Query: 162 NGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LG----YVYKD 209
N P S + RR V + I + SD GNY C T++ LG V +
Sbjct: 160 NEYP-SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNTRVLGSPTPLVLRS 218
Query: 210 VYVNVLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILE 268
V + + P+I + P+ G TV L C G P P++NW + + + +
Sbjct: 219 DGV-MGEYEPKIEVQFPETLPAAKGSTVRLECFALGNPVPQINWRRSDGMPFPNKIKLRK 277
Query: 269 -TGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATF 327
G L+I + D+G Y C A N G G LT + D E+ S +
Sbjct: 278 FNGMLEIQNFQQEDTGSYECIAENSRGKNVARGRLTYYAKPYWLQLLRDVEIAVEDSLYW 337
Query: 328 RCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTEL 387
C A P K S WL+ + + E +Q + +LT+T + DSG + C A+ +
Sbjct: 338 ECRASGKP--KPSYRWLKNGDALVLEER---IQIENGALTITNLNVTDSGMFQCIAENKH 392
Query: 388 DFIEAQATLTV 398
I + A L V
Sbjct: 393 GLIYSSAELKV 403
Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 164/729 (22%), Positives = 277/729 (37%), Gaps = 106/729 (14%)
Query: 55 CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
C G P P W K+G + +RI N +L I ++ +D G + C N G
Sbjct: 339 CRASGKPKPSYRWLKNGDALVLEERIQIEN--GALTITNLNVTDSGMFQCIAENKHGLIY 396
Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
S S +L V+A AP F+ P + + V +CK P W + +
Sbjct: 397 S-SAELKVVASAPDFSRNPMKKMVQVQVGSLVILDCKPRASPRALSFWKKGDMMVREQAR 455
Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
G + I N+ K+D G Y C A N G ++ V+ I AP +
Sbjct: 456 VSFLNDG--GLKIMNVTKADAGTYTCTAENQFGKANGTTHL-VVTEPTRIILAPSNMDVA 512
Query: 232 DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
G++V+L C+V P ++ W N E GG +GDL I ++
Sbjct: 513 VGESVILPCQVQHDPLLDIMFAWYFNGALTDFKKDGSHFEKVGGS----SSGDLMIRNIQ 568
Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK 338
SG+Y C + + + + L V+ PE+ +V+ ++D + +
Sbjct: 569 LKHSGKYVCMVQTGVDSVSSAAELIVRGSP---GPPENVKVDE----------ITDTTAQ 615
Query: 339 LSIVWLRGSEP----IDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
LS W G++ I + + R S + T +D +T ++E +
Sbjct: 616 LS--WTEGTDSHSPVISYAVQARTPFSVGWQSVRTVPEVIDGKTHTATVVELNPWVEYEF 673
Query: 395 TLTVQVPL---------------EAPSNFTLIQVIDA----KKAVVSWNPVSPQSLRG-- 433
+ + EA +V + V++W+PV P+ L+
Sbjct: 674 RIVASNKIGGGEPSLPSEKVRTEEAAPEIAPSEVSGGGGSRSELVITWDPV-PEELQNGG 732
Query: 434 ------HFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAY 487
FR V TW + V + ES VP S +V +N
Sbjct: 733 GFGYVVAFRPLGVTTWIQTVVTSPDNPRYVFRNES-------IVPFSPYEVKVGVYNNKG 785
Query: 488 NGPPSEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSV 544
GP S + + + E P S + A L SS + W + + NG L+GY+++Y +
Sbjct: 786 EGPFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNN 845
Query: 545 KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV---- 600
G + ++ TSA L GL+ + Y + Y AG G S +
Sbjct: 846 GGEEESSRKVKVA----GNQTSAVLRGLKSNLAYYTAVRAYNSAGAGPFSATVNATTKKT 901
Query: 601 -PFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWR 659
P + P NV +T ++++W + +E+ + Y++F+R + N VL+
Sbjct: 902 PPSQPPGNVVWN-ATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQ----NNVHVLNTN 956
Query: 660 Q--SELVLANQPTFQPYEIKVVQTWTEKDGEGS----IRELIVNKGESTTTEVDKFVPAS 713
+ +EL+L P + Y I+V T DG S I + +T+ + P S
Sbjct: 957 KTSAELLL---PIKEDYIIEVKATTDGGDGTSSEQIRIPRITSMDARGSTSAISNIHPLS 1013
Query: 714 KNFARVLAF 722
+ +L F
Sbjct: 1014 GYMSVLLFF 1022
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 124/300 (41%), Gaps = 32/300 (10%)
Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
+L P F EP F +E++ +T C+A G P P W NG I + + + G
Sbjct: 22 LLQGPVFIKEPSNSIFPVDSEDKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLNG 81
Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
N I I R DTG+Y C ATNSLG + A+ + +V +G+ VV
Sbjct: 82 GNLIVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTRMRSTVSVREGQGVV 141
Query: 238 LTCRVFGAPKPEVN-----WIHNQK----ELTGGRYTILETGDLKITDVAFADSGEYTCF 288
L C P P W+ N+ E R+ ETG L I V +D G YTC
Sbjct: 142 LLC----GPPPHSGELSYAWVFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCV 197
Query: 289 ARNKLGTAQGSGS---LTVKEHTHITDQ--------PEDYEVEAGQSATFRCNAVSDPSL 337
+ + + GS L ++ + + PE G + C A+ +P
Sbjct: 198 VTSTVTNTRVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVRLECFALGNPVP 257
Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLT 397
+++ W R S+ + F ++ + + N L + + D+G Y C A+ A+ LT
Sbjct: 258 QIN--WRR-SDGMPFPNKIKLRKFNGM-LEIQNFQQEDTGSYECIAENSRGKNVARGRLT 313
>sp|Q69Z26|CNTN4_MOUSE Contactin-4 OS=Mus musculus GN=Cntn4 PE=2 SV=2
Length = 1026
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 189/733 (25%), Positives = 300/733 (40%), Gaps = 112/733 (15%)
Query: 45 ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
A + V+L C G P+P +W + DG PI R + N L I + + D GSY
Sbjct: 237 AEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSN--GILEIPNFQQEDAGSYE 294
Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
C N G+ + L+ A P + I+ A EE+V +ECKA+G P+P W+ NG
Sbjct: 295 CVAENSRGKNVAKG-QLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNG 353
Query: 164 KPISQAPPNPRRKV----GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
P+ R ++ G ITI NL SD G Y C A N G ++ ++V+A +P
Sbjct: 354 DPLLT-----RDRIQIEQGTLNITIVNL--SDAGMYQCVAENKHGVIFSSAELSVIAESP 406
Query: 220 EITEAPKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELTGG-RYTILETGDLKITD 276
+ + T+ G VV+ C+ +P+P W ++ L R TI E G+L+I +
Sbjct: 407 DFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIIN 466
Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
V +D+G YTC A N GTA +G++ VK+ T + P +V G+S C D S
Sbjct: 467 VTKSDAGSYTCIATNHFGTASSTGNVIVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHS 526
Query: 337 LKLSIVWLRGSEPIDFESEPRFV-----QSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
L + W IDF+ + Q + L + +G+Y C QT +D +
Sbjct: 527 LDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLS 586
Query: 392 AQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNP----VSPQSLRGHFRGYKVQTWTEK- 446
A L V+ P P T+ ++ D A +SW P SP ++ Y +Q T
Sbjct: 587 VAADLIVRGPPGPPEAVTIDEITDT-TAQLSWRPGPDNHSPITM------YVIQARTPFS 639
Query: 447 ---DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPS---------EI 494
++ +L+ G++ T V P + R +A N G PS E
Sbjct: 640 VGWQAVNTVPDLV--DGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEA 697
Query: 495 ISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPL 552
+ VTP V G S S + W V E NG GY + ++ G +
Sbjct: 698 LPEVTPANVSGGGGS-------KSELVITWETVPEELQNGRGFGYVVAFR-----PHGKM 745
Query: 553 LERLPYI--SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNP 605
+ L + +D + + + P + + + + + G+G S L Y P K P
Sbjct: 746 IWMLTVLASADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTLVYSAEEEPTKPP 805
Query: 606 DNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVL 665
++ R + ++ + W A P +
Sbjct: 806 ASIFARSLSATDIEVFW-ASP-------------------------------------IG 827
Query: 666 ANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGA 725
N+ Q YE+K W D E + ++ I G T+T++ ++ V A+N A
Sbjct: 828 KNRGRIQGYEVKY---WRHDDKEENAKK-IRTVGNQTSTKITNLKGSALYHLSVKAYNSA 883
Query: 726 YNGPPSEIISFVT 738
GP S ++ T
Sbjct: 884 GTGPSSATVNVTT 896
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 176/687 (25%), Positives = 260/687 (37%), Gaps = 103/687 (14%)
Query: 88 SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
+L I VE SD G+YTC V+N V K ++ P V+ PE + A
Sbjct: 178 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPA 237
Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
+ TV EC A G P P I W +GKPI++ RR + I N ++ D G+Y
Sbjct: 238 EKGTTVKLECFALGNPVPTILWRRADGKPIAR---KARRHKSNGILEIPNFQQEDAGSYE 294
Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
C A NS G + A P + D + ++V C+ G PKP W+ N
Sbjct: 295 CVAENSRGKNVAKGQLTFYAQ-PNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNG 353
Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
L +E G L IT V +D+G Y C A NK G S L+V I + P+
Sbjct: 354 DPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSV-----IAESPDF 408
Query: 317 YE--------VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
V+ G C + P + W +G E I E+E R S D +L +
Sbjct: 409 SRTLLKRVTLVKVGGEVVIECKPKASP--RPVYTWRKGRE-ILRENE-RITISEDGNLRI 464
Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSP 428
++ D+G YTC A + + V+ P + + + V + V+
Sbjct: 465 INVTKSDAGSYTCIATNHFGTASSTGNVIVKDPTKVMVPPSSMDVTVGESIVLPCQVTHD 524
Query: 429 QSLRGHFRGYKVQTWT--------EKD--------GEGSIRELIVNKGE---------ST 463
SL F TWT +KD G+ S +L++ +
Sbjct: 525 HSLDIVF------TWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMV 578
Query: 464 TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQ-SLEAIPLGSSAFYL 522
T VDK A+ R GPP + E T Q S P S +
Sbjct: 579 QTSVDKLSVAADLIVR---------GPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITM 629
Query: 523 KWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHL 582
++ P + + +Q+V +P + D T +A + GL P +Y
Sbjct: 630 YVIQARTP------FSVGWQAVN---------TVPDLVDGKTFTATVVGLNPWVEYEFRT 674
Query: 583 AGYTKAGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFK 636
G G S + +P P NV G G + + LVI+W +PE N F
Sbjct: 675 VAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFG 734
Query: 637 YRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL 694
Y + +R H W + S V N+ F P+E+KV + +G S L
Sbjct: 735 YVVAFRPHGK-MIWMLTVLASADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTL 793
Query: 695 IVNKGESTTTEVDKFVPASKNFARVLA 721
+ + E T P + FAR L+
Sbjct: 794 VYSAEEEPTK------PPASIFARSLS 814
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 141/369 (38%), Gaps = 30/369 (8%)
Query: 49 KKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV-EFSDQGSYTCEVS 107
KKV+L C G P P W +G ++ SL+I + + D G+Y C +
Sbjct: 44 KKVKLSCEVKGNPKPHIRWKINGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQCIAT 103
Query: 108 NGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHWVHN 162
N G S L F T ++ + + C G P E W+ N
Sbjct: 104 NSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLC---GPPPHSGELSYAWIFN 160
Query: 163 GKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNS------LGYVYKDVYVN- 213
P Q + RR V + I + KSD GNY C TN+ LG + N
Sbjct: 161 EYPSYQ---DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRND 217
Query: 214 --VLAHAPEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKELTGGRYTILET 269
+ + P+I + P+ G TV L C G P P + W + K +
Sbjct: 218 GVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSN 277
Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
G L+I + D+G Y C A N G G LT + D V +S + C
Sbjct: 278 GILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWEC 337
Query: 330 NAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
A P K + WL+ +P+ +Q +L +T + D+G Y C A+ +
Sbjct: 338 KANGRP--KPTYRWLKNGDPLLTRDR---IQIEQGTLNITIVNLSDAGMYQCVAENKHGV 392
Query: 390 IEAQATLTV 398
I + A L+V
Sbjct: 393 IFSSAELSV 401
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 117/303 (38%), Gaps = 34/303 (11%)
Query: 119 DLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRR 175
D L P F EP F +EE+ V C+ G P+P I W NG + + R
Sbjct: 19 DDYTLHGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKINGTDVDIG-MDFRY 77
Query: 176 KVGPNRITIENLRKS-DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DG 233
V + I N K+ D G Y C ATNS G + A+ + +V G
Sbjct: 78 SVVDGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRG 137
Query: 234 KTVVLTCRVFGAPKPEVN-----WIHNQ--KELTGGRYTILETGDLKITDVAFADSGEYT 286
+ +VL C P P WI N+ R+ ETG+L I V +D G YT
Sbjct: 138 QGMVLLC----GPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYT 193
Query: 287 CFARNK------LG-----TAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDP 335
C N LG + G + E PE E G + C A+ +P
Sbjct: 194 CVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNP 253
Query: 336 SLKLSIVWLRGS-EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQA 394
+I+W R +PI + R +SN L + + D+G Y C A+ A+
Sbjct: 254 V--PTILWRRADGKPI--ARKARRHKSNGI-LEIPNFQQEDAGSYECVAENSRGKNVAKG 308
Query: 395 TLT 397
LT
Sbjct: 309 QLT 311
Score = 41.6 bits (96), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 21/192 (10%)
Query: 432 RGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
RG +GY+V+ W D E + ++ I G T+T++ ++ V A+N A GP
Sbjct: 830 RGRIQGYEVKYWRHDDKEENAKK-IRTVGNQTSTKITNLKGSALYHLSVKAYNSAGTGPS 888
Query: 492 SEIISFVT----PEGVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVK 545
S ++ T P PG + + S L W VK + GYK+ Y+ +
Sbjct: 889 SATVNVTTRKPPPSQPPGNIIWNSS----DSKIILNWDQVKALDNESEVKGYKVLYRWNR 944
Query: 546 GTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNP 605
+ + + TS +L+ L Y I + ++ GDG+ S+ + +P +
Sbjct: 945 QSSTS--------VIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGSSSEQI-RIPKISN 994
Query: 606 DNVEGRGSTPNN 617
G G++ +N
Sbjct: 995 SYARGSGASTSN 1006
>sp|Q90478|L1CA1_DANRE Neural cell adhesion molecule L1.1 (Fragment) OS=Danio rerio
GN=nadl1.1 PE=2 SV=1
Length = 1197
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/390 (30%), Positives = 181/390 (46%), Gaps = 9/390 (2%)
Query: 40 RKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQ 99
R + LR + + L CI G P P+ W + ++P +R + + L I +V SD
Sbjct: 184 RSSYLVLRGQTLTLQCIPEGLPTPEVHWDRIDSALSP-NRTKKLYNNRWLQIDNVLESDD 242
Query: 100 GSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHW 159
G Y C N K + ++V AAPY+T PE A ETV +CKA G+P P I W
Sbjct: 243 GEYVCTARNSENSVKHH-YTVTVEAAPYWTRSPEEHLYAPGETVRLDCKADGIPAPNITW 301
Query: 160 VHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAP 219
NG P+S +PRR+V ++ + N+ SDT Y C A N G + + +V+V+
Sbjct: 302 SINGVPVSGTDVDPRRRVSSGKLILSNVEFSDTAVYQCEAVNKHGSILINTHVHVVELPA 361
Query: 220 EITEAPKDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITD 276
+I + Y G+TV+L CR FG+P P+++W + + L+ + + G LKI++
Sbjct: 362 QILTPDERLYQATAGQTVMLDCRTFGSPLPKIHWEILDSIPALSNAKISQTTNGSLKISN 421
Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPS 336
V+ DS YTC + S + V T I P++ V G A C D +
Sbjct: 422 VSEEDSNRYTCSVSETNKSI--SADVEVLNRTKIVGPPQNLHVIRGSDAILHCKYTVDHN 479
Query: 337 LKLSIV-WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQAT 395
LK V W + I + + SL V D G Y+C T LD A
Sbjct: 480 LKSPTVQWNKDGHKITASTSNDKYHEIEGSLKVLDVQMEDMGIYSCEVSTTLDSDTASGY 539
Query: 396 LTVQVPLEAPSNFTLIQVIDAKKAVVSWNP 425
+TVQ + P + L + ++ + +SW P
Sbjct: 540 ITVQDKPDPPQSLKLSEKME-RSVTISWMP 568
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 150/565 (26%), Positives = 242/565 (42%), Gaps = 64/565 (11%)
Query: 141 ETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNA 199
+T+T +C GLP PE+HW +S PN +K+ NR + I+N+ +SD G Y C A
Sbjct: 193 QTLTLQCIPEGLPTPEVHWDRIDSALS---PNRTKKLYNNRWLQIDNVLESDDGEYVCTA 249
Query: 200 TNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL 259
NS V V V A AP T +P++ G+TV L C+ G P P + W N +
Sbjct: 250 RNSENSVKHHYTVTVEA-APYWTRSPEEHLYAPGETVRLDCKADGIPAPNITWSINGVPV 308
Query: 260 TGGRYT---ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPED 316
+G + +G L +++V F+D+ Y C A NK GS+ + H H+ + P
Sbjct: 309 SGTDVDPRRRVSSGKLILSNVEFSDTAVYQCEAVNK------HGSILINTHVHVVELPAQ 362
Query: 317 --------YEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTV 368
Y+ AGQ+ C P K+ L + I S + Q+ + SL +
Sbjct: 363 ILTPDERLYQATAGQTVMLDCRTFGSPLPKIHWEIL---DSIPALSNAKISQTTNGSLKI 419
Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAP-SNFTLIQVIDA---KKAVVSWN 424
+ SE DS +YTC I A + + + P N +I+ DA K V N
Sbjct: 420 SNVSEEDSNRYTCSVSETNKSISADVEVLNRTKIVGPPQNLHVIRGSDAILHCKYTVDHN 479
Query: 425 PVSPQSLRGHFRGYKVQTWTEKDG----EGSIRELIVNKGESTTTEVDKFVPASKNFARV 480
SP +++ + G+K+ T D EGS++ L V +++ S +
Sbjct: 480 LKSP-TVQWNKDGHKITASTSNDKYHEIEGSLKVLDV--------QMEDMGIYSCEVSTT 530
Query: 481 LAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIK 540
L + A ++T + P QSL+ + + W+ + N + Y I+
Sbjct: 531 LDSDTASG--------YITVQDKPDPPQSLKLSEKMERSVTISWMPSVENNSPVTEYVIE 582
Query: 541 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA--ESKYLF 598
+ G ++ +S + + +KY + G A ES +
Sbjct: 583 MNEGETPDEG-QWQKYRSVSQDIDSWRSICSY---SKYHFQIRAVNSIGTSAPTESSLSY 638
Query: 599 YVPFK----NPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR-HNTGEAWNQD 653
P NP+NV + P +++ISW M + N P F+Y++FWRR ++G W +
Sbjct: 639 STPAAKPDTNPENVMTLSTDPKSMIISWQEMDRRQFNGPGFQYKVFWRRAADSGAHWTES 698
Query: 654 DVLDWRQSELVLANQPTFQPYEIKV 678
V L++ N TF +EIKV
Sbjct: 699 SV---SNPPLMVNNTGTFVSFEIKV 720
Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 104/229 (45%), Gaps = 19/229 (8%)
Query: 379 YTCRAQTELDFIEAQATLTV------QVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLR 432
+ + Q D A LTV PLEAPS ++ + + +V W+PV P+S+R
Sbjct: 716 FEIKVQAVNDLGAAPEPLTVIGYSGEDFPLEAPSALSVTE-LQKTSVMVRWSPVRPESVR 774
Query: 433 GHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEV-----DKFVPASKNFAR----VLAF 483
GH GYK+ + + + + G T EV +K V + ++ + AF
Sbjct: 775 GHLLGYKIYLRMKGSQWETPGRAVSSSGNPTVIEVPADAAEKIVSDLQFYSDYTLTITAF 834
Query: 484 NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQS 543
N GP SE SF TPEG PG V L S L+W P +PNG + GY ++YQ
Sbjct: 835 NSKGEGPHSEE-SFSTPEGAPGPVLFLPFDSPSESEITLRWEAPHKPNGEIRGYLLQYQE 893
Query: 544 VKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 592
V P + + I P T L L P ++Y HL+ AGDGA
Sbjct: 894 VVIGSESP--QHVESIDLPAVTEFTLKNLNPESRYTFHLSARNDAGDGA 940
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 125/305 (40%), Gaps = 25/305 (8%)
Query: 99 QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEE--ETVTFECK-ASGLPEP 155
QG+Y C +N +G A S + L+ P + A E E+ C P
Sbjct: 42 QGTYRCYAANELGTAVSNLVHLTTEPVPSLAKVKKQKRRAYEVGESAVLRCNPPKSSVTP 101
Query: 156 EIHWVHNGKPISQAPPNPRRKVGPN-RITIENLRKSDT-GNYGCNA--TNSLGYVYKD-- 209
+IHW+ P N R + + + NL +D+ +Y CNA N+ + K+
Sbjct: 102 KIHWM--DMQFHHIPLNERVTISRDGNLYFANLIANDSRDDYTCNAHYINASIILPKEPM 159
Query: 210 -VYV--------NVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT 260
+YV N A A + G+T+ L C G P PEV+W L+
Sbjct: 160 SIYVTPSNSVVKNRRAKLHHPAGARSSYLVLRGQTLTLQCIPEGLPTPEVHWDRIDSALS 219
Query: 261 GGRYTILETGD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEV 319
R L L+I +V +D GEY C ARN + + ++TV+ + T PE++
Sbjct: 220 PNRTKKLYNNRWLQIDNVLESDDGEYVCTARNSENSVKHHYTVTVEAAPYWTRSPEEHLY 279
Query: 320 EAGQSATFRCNAVSDPSLKLSIVWLRGSEPID-FESEPRFVQSNDYSLTVTKSSELDSGQ 378
G++ C A P+ +I W P+ + +PR S+ L ++ D+
Sbjct: 280 APGETVRLDCKADGIPA--PNITWSINGVPVSGTDVDPRRRVSSG-KLILSNVEFSDTAV 336
Query: 379 YTCRA 383
Y C A
Sbjct: 337 YQCEA 341
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 60/156 (38%), Gaps = 33/156 (21%)
Query: 246 PKPEVNWIHNQKELTGGRYTILETGDLK---ITDVAFADSGEYTCFARNKLGTAQGSGSL 302
P P W+ + K+ + E+G L D+ F G Y C+A N+LGTA
Sbjct: 7 PSPSFRWVKDGKQFGE---VLSESGTLTPHPTMDLHFYQ-GTYRCYAANELGTA------ 56
Query: 303 TVKEHTHITDQP----------EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDF 352
V H+T +P + E G+SA RCN S+ I W+ + F
Sbjct: 57 -VSNLVHLTTEPVPSLAKVKKQKRRAYEVGESAVLRCNPPKS-SVTPKIHWMD----MQF 110
Query: 353 ESEP---RFVQSNDYSLTVTKSSELDS-GQYTCRAQ 384
P R S D +L DS YTC A
Sbjct: 111 HHIPLNERVTISRDGNLYFANLIANDSRDDYTCNAH 146
>sp|Q9UQ52|CNTN6_HUMAN Contactin-6 OS=Homo sapiens GN=CNTN6 PE=1 SV=1
Length = 1028
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 181/715 (25%), Positives = 303/715 (42%), Gaps = 76/715 (10%)
Query: 45 ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
A ++ V+L C G P+P W + DG P+ + S+ L I + + D+G Y
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQ--AILEIPNFQQEDEGFYE 296
Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
C SN G + L A P + + + + + + + +ECKASG P P W+ NG
Sbjct: 297 CIASNLRGRNLAKG-QLIFYAPPEWEQKIQNTHLSIYDNLLWECKASGKPNPWYTWLKNG 355
Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
+ ++ P R ++ + I L SD+G Y C A N +Y + + VLA AP+ ++
Sbjct: 356 ERLN---PEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSK 412
Query: 224 AP--KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
+P K + G +V+ C+ P+ ++W + L R +LE G LKI ++ +
Sbjct: 413 SPVKKKSFVQVGGDIVIGCKPNAFPRAAISWKRGTETLRQSKRIFLLEDGSLKIYNITRS 472
Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
D+G YTC A N+ GTA+ +GSL VKE T IT P +V G+S C DPS+++
Sbjct: 473 DAGSYTCIATNQFGTAKNTGSLIVKERTVITVPPSKMDVTVGESIVLPCQVSHDPSIEVV 532
Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
VW + ID + R + L + SG+Y C QT L+ + A A +
Sbjct: 533 FVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADI 592
Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
V+ P P + ++ I + + +SW P + + + +QT T ++
Sbjct: 593 IVRGPPGPPEDVQ-VEDISSTTSQLSWR-AGPDN-NSPIQIFTIQTRTPFSVGWQAVATV 649
Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEA 512
E++ G++ V P + RV+A N G PSE + + V +
Sbjct: 650 PEIL--NGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNI 707
Query: 513 IPLGS--SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 568
G S + W + E NG GY I ++ V T E++ + + + +
Sbjct: 708 HGGGGSRSELVITWESIPEELQNGEGFGYIIMFRPVGSTTWSK--EKVSSV-ESSRFVYR 764
Query: 569 LAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGS-----TPNNLVISWT 623
+ P + + + + Y G+G+ S ++ + RG+ + + + +SW
Sbjct: 765 NESIIPLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSLQSFSASEMEVSWN 824
Query: 624 AMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWT 683
A+ AWN R + VL YE V WT
Sbjct: 825 AI-----------------------AWN-------RNTGRVLG-------YE---VLYWT 844
Query: 684 EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
+ E I ++ V+ G TT + + FA V A+N A GP S ++ T
Sbjct: 845 DDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGTGPSSPPVNVTT 898
Score = 119 bits (298), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 162/660 (24%), Positives = 259/660 (39%), Gaps = 87/660 (13%)
Query: 88 SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
+L I VE SD G+YTC ++N EA+ SV P V+
Sbjct: 180 NLYIAKVEPSDVGNYTCFITNK--EAQR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 232
Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
PE I AA++ +V EC A G P P+I W +G P+ P + + I N ++
Sbjct: 233 FPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPL---PGKVKYSKSQAILEIPNFQQ 289
Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
D G Y C A+N G + + PE + ++ + ++ C+ G P P
Sbjct: 290 EDEGFYECIASNLRGRNLAKGQL-IFYAPPEWEQKIQNTHLSIYDNLLWECKASGKPNPW 348
Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
W+ N + L +E G L IT + +DSG Y C A NK + L V
Sbjct: 349 YTWLKNGERLNPEERIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAP 408
Query: 309 HITDQPEDYE--VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
+ P + V+ G C + P + +I W RG+E + R D SL
Sbjct: 409 DFSKSPVKKKSFVQVGGDIVIGCKPNAFP--RAAISWKRGTETL--RQSKRIFLLEDGSL 464
Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV------ 420
+ + D+G YTC A + + +L V+ T+I V +K V
Sbjct: 465 KIYNITRSDAGSYTCIATNQFGTAKNTGSLIVK-------ERTVITVPPSKMDVTVGESI 517
Query: 421 -----VSWNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKF 470
VS +P F G + E+ G S+ +L++ + K+
Sbjct: 518 VLPCQVSHDPSIEVVFVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQ--LHHSGKY 575
Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
+ + L+ ++ + G PG + ++ + S+ L W
Sbjct: 576 LCTVQTTLESLS-----------AVADIIVRGPPGPPEDVQVEDISSTTSQLSWRAGPDN 624
Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
N + + I Q+ VG + +P I + T +A + GL P +Y + G
Sbjct: 625 NSPIQIFTI--QTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIG 682
Query: 590 DG--AESKYLFY----VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
G +E L VP P N+ G G + + LVI+W ++PE N F Y I +R
Sbjct: 683 IGEPSEPSELLRTKASVPVVAPVNIHGGGGSRSELVITWESIPEELQNGEGFGYIIMFRP 742
Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
+ W+++ V S V N+ P+E+KV +GEGS+ + IV GE
Sbjct: 743 VGS-TTWSKEKVSSVESSRFVYRNESIIPLSPFEVKV--GVYNNEGEGSLSTVTIVYSGE 799
Score = 99.8 bits (247), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 164/718 (22%), Positives = 278/718 (38%), Gaps = 93/718 (12%)
Query: 55 CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
C G P P W K+G +NP +RI N +LII + SD G Y C N +
Sbjct: 339 CKASGKPNPWYTWLKNGERLNPEERIQIEN--GTLIITMLNVSDSGVYQCAAENKY-QII 395
Query: 115 SYSIDLSVLA-APYFTVEP----EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQA 169
+ +L VLA AP F+ P F+ + + CK + P I W + + Q+
Sbjct: 396 YANAELRVLASAPDFSKSPVKKKSFVQVGGD--IVIGCKPNAFPRAAISWKRGTETLRQS 453
Query: 170 PPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY 229
+ G + I N+ +SD G+Y C ATN G K+ ++ IT P
Sbjct: 454 KRIFLLEDG--SLKIYNITRSDAGSYTCIATNQFGTA-KNTGSLIVKERTVITVPPSKMD 510
Query: 230 TVDGKTVVLTCRVFGAPKPEVN--WIHN-----------QKELTGGRYTILETGDLKITD 276
G+++VL C+V P EV W N E GG GDL I +
Sbjct: 511 VTVGESIVLPCQVSHDPSIEVVFVWFFNGDVIDLKKGVAHFERIGGE----SVGDLMIRN 566
Query: 277 VAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSD 334
+ SG+Y C + L + + V+ PED +VE S T + + A D
Sbjct: 567 IQLHHSGKYLCTVQTTLESLSAVADIIVRGPP---GPPEDVQVEDISSTTSQLSWRAGPD 623
Query: 335 PSLKLSIVWLRGSEPIDF-----ESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDF 389
+ + I ++ P + P + Y+ TV S ++ A +
Sbjct: 624 NNSPIQIFTIQTRTPFSVGWQAVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGI 683
Query: 390 IEAQ-----ATLTVQVPLEAPSNFTLIQVIDAKKA--VVSWNPVSPQSLRGHFRGYKVQ- 441
E VP+ AP N I ++ V++W + + G GY +
Sbjct: 684 GEPSEPSELLRTKASVPVVAPVN---IHGGGGSRSELVITWESIPEELQNGEGFGYIIMF 740
Query: 442 ------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEII 495
TW+++ V + ES +P S +V +N G S +
Sbjct: 741 RPVGSTTWSKEKVSSVESSRFVYRNES-------IIPLSPFEVKVGVYNNEGEGSLSTVT 793
Query: 496 SFVTPEGVP------GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGT 547
+ E P ++QS A + S + W + G ++GY++ Y K +
Sbjct: 794 IVYSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDDSKES 850
Query: 548 KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PF 602
+G + +S TT + GL+ +T Y + Y AG G S + P
Sbjct: 851 MIGKI-----RVSGNVTTK-NITGLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPS 904
Query: 603 KNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSE 662
+ P N+ + T + L ++W + +E+ + Y+I +R++ ++ +L+ +
Sbjct: 905 QPPANIAWK-LTNSKLCLNWEHVKTMENESEVLGYKILYRQNRQ----SKTHILETNNTS 959
Query: 663 LVLANQPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVL 720
L P + Y I++ DG S E+ + K S ++ +F+ S +F ++
Sbjct: 960 AELL-VPFEEDYLIEIRTVSDGGDGSSS-EEIRIPKMSSLSSRGIQFLEPSTHFLSIV 1015
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 135/380 (35%), Gaps = 44/380 (11%)
Query: 46 LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK--HVEFSDQGSYT 103
L +V L C G P P W ++G I+ + G SL I H + D G Y
Sbjct: 41 LSKSEVILNCAANGYPSPHYRWKQNGTDIDFTMSYHYRLDGGSLAINSPHTD-QDIGMYQ 99
Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLPEPEI----- 157
C +N +G S L F T ++ E + V C P P
Sbjct: 100 CLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCG----PPPHFGDLSY 155
Query: 158 HWVHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGY---------- 205
W N P+ N RR V + I + SD GNY C TN
Sbjct: 156 AWTFNDNPLYVQEDN-RRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPPTPL 214
Query: 206 ------VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIH-NQKE 258
V + + PE +A KD +V L C G P P+++W +
Sbjct: 215 VQRTDGVMGEYEPKIEVRFPETIQAAKD------SSVKLECFALGNPVPDISWRRLDGSP 268
Query: 259 LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYE 318
L G L+I + D G Y C A N G G L + ++
Sbjct: 269 LPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPPEWEQKIQNTH 328
Query: 319 VEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQ 378
+ + + C A P+ + WL+ E ++ E +Q + +L +T + DSG
Sbjct: 329 LSIYDNLLWECKASGKPNPWYT--WLKNGERLNPEER---IQIENGTLIITMLNVSDSGV 383
Query: 379 YTCRAQTELDFIEAQATLTV 398
Y C A+ + I A A L V
Sbjct: 384 YQCAAENKYQIIYANAELRV 403
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 105/286 (36%), Gaps = 32/286 (11%)
Query: 122 VLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVG 178
+L+ P FT EP F + V C A+G P P W NG I R G
Sbjct: 22 LLSRPIFTQEPHDVIFPLDLSKSEVILNCAANGYPSPHYRWKQNGTDIDFTMSYHYRLDG 81
Query: 179 PNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVV 237
+ D G Y C ATN LG + A+ + + +V +G+ VV
Sbjct: 82 GSLAINSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVV 141
Query: 238 LTCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCF 288
L C P P W N L R+ ETG+L I V +D G YTCF
Sbjct: 142 LLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCF 197
Query: 289 ARNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSL 337
NK + QG + V+ + + PE + S C A+ +P
Sbjct: 198 ITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVP 257
Query: 338 KLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
+S L GS + ++ +S L + + D G Y C A
Sbjct: 258 DISWRRLDGSP---LPGKVKYSKSQAI-LEIPNFQQEDEGFYECIA 299
>sp|O00533|CHL1_HUMAN Neural cell adhesion molecule L1-like protein OS=Homo sapiens
GN=CHL1 PE=1 SV=4
Length = 1208
Score = 172 bits (437), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 177/713 (24%), Positives = 297/713 (41%), Gaps = 68/713 (9%)
Query: 46 LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCE 105
L+ + + L C G P PQ W+K G + P R ++ NYGK+L I++V + D+G+Y C
Sbjct: 253 LKGEILLLECFAEGLPTPQVDWNKIGGDL-PKGRETKENYGKTLKIENVSYQDKGNYRCT 311
Query: 106 VSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
SN +G A ++ + V P +T +P+ + C+A G P+P I W NG P
Sbjct: 312 ASNFLGTA-THDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 370
Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
+ P V P I+ NL+ + T Y C A+N G + + ++V+ P I
Sbjct: 371 VDNHP-FAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQTKD 429
Query: 226 KDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILETGDLKITDVAFADS 282
+ Y TV G + L C F +P+ V+W + K L G RY I E G L+I D+
Sbjct: 430 GENYATVVGYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDA 489
Query: 283 GEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLK--LS 340
G Y+C+ N +G + +L ++ T + P++ + C + D LK L
Sbjct: 490 GSYSCWVENAIGKTAVTANLDIRNATKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLK 549
Query: 341 IVWLRGSEPIDFE-SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
+ W + E + +E + + +LT++ + D G Y C A T LD +TV
Sbjct: 550 LSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVL 609
Query: 400 VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNK 459
+ P N L + + + ++W + + + Y V+ K+ G EL +
Sbjct: 610 DVPDPPENLHLSERQN-RSVRLTWEAGADHN--SNISEYIVEFEGNKEEPGRWEELTRVQ 666
Query: 460 GESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIIS-FVTPEGVPG-TVQSLEAIPLGS 517
G+ TT + P + RV+A N PS+ TP P Q++
Sbjct: 667 GKKTTV-ILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 725
Query: 518 SAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 575
+KW +K + NG + Y++ ++ +G V + T T+ L + P+
Sbjct: 726 KEMIIKWEPLKSMEQNGPGLEYRVTWKP-QGAPV--------EWEEETVTNHTLRVMTPA 776
Query: 576 T--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN---VEGRGSTPNNLV-ISWTAMPEI 628
Y + + + G G + + + Y PD + G + LV ++W+ +P+
Sbjct: 777 VYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKD 836
Query: 629 EHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQTWTEKDGE 688
+ Y+I W W +LD R P E+ +++
Sbjct: 837 RVHGRLKGYQINW--------WKTKSLLDGRT-----------HPKEVNILRF------- 870
Query: 689 GSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEG 741
G+ + V S+ VLA+N GP SE F TPEG
Sbjct: 871 ---------SGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTPEG 914
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 124/567 (21%), Positives = 222/567 (39%), Gaps = 54/567 (9%)
Query: 135 INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPN---RITIENLRKSD 191
I + E + EC A GLP P++ W G + + R+ N + IEN+ D
Sbjct: 250 ITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKG-----RETKENYGKTLKIENVSYQD 304
Query: 192 TGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVN 251
GNY C A+N LG D +V ++ P T+ P+ G +L C G P+P +
Sbjct: 305 KGNYRCTASNFLGTATHDFHV-IVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIK 363
Query: 252 WIHNQKELTGGRYT--ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH 309
W N + + ++ ++ T++ + Y C A N GT + ++ V +
Sbjct: 364 WRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRP 423
Query: 310 I--TDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
+ T E+Y G SA C + P +S W + E E + N +L
Sbjct: 424 LIQTKDGENYATVVGYSAFLHCEFFASPEAVVS--WQKVEEVKPLEGRRYHIYENG-TLQ 480
Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPV- 426
+ +++E D+G Y+C + + A L ++ N T ++V + + +
Sbjct: 481 INRTTEEDAGSYSCWVENAIGKTAVTANLDIR-------NATKLRVSPKNPRIPKLHMLE 533
Query: 427 --SPQSLRGHFRGYKVQTWTEKDGEG------SIRELIVNKGESTTTEVDKFVPASKNFA 478
H + +W+ KDGE +I++ T + V +
Sbjct: 534 LHCESKCDSHLKHSLKLSWS-KDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCS 592
Query: 479 RVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYK 538
A + A + I+ VT VP ++L + + L W N + Y
Sbjct: 593 AHTALDSAAD------ITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGADHNSNISEYI 646
Query: 539 IKYQSVKGTKVGP-LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYL 597
++++ G K P E L + TT + L P +Y+ + + G S+
Sbjct: 647 VEFE---GNKEEPGRWEELTRVQGKKTTV--ILPLAPFVRYQFRVIAVNEVGRSQPSQPS 701
Query: 598 FY------VPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWN 651
+ P +NP N+ + S P ++I W + +E N P +YR+ W+ W
Sbjct: 702 DHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWE 761
Query: 652 QDDVLDWRQSELVLANQPTFQPYEIKV 678
++ V + L + + PY++KV
Sbjct: 762 EETVTN---HTLRVMTPAVYAPYDVKV 785
Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 128/539 (23%), Positives = 223/539 (41%), Gaps = 49/539 (9%)
Query: 88 SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFEC 147
+L I D GSY+C V N +G+ + + +L + A V P+ + + C
Sbjct: 478 TLQINRTTEEDAGSYSCWVENAIGKT-AVTANLDIRNATKLRVSPKNPRIPKLHMLELHC 536
Query: 148 KA---SGLPEP-EIHWVHNGKPIS-QAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNS 202
++ S L ++ W +G+ + R + +TI N+ D G Y C+A +
Sbjct: 537 ESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTA 596
Query: 203 LGYVYKDVYVNVLAHAPEITEAPKDEYTVD--GKTVVLTCRVFGAPKPE------VNWIH 254
L V VL ++ + P++ + + ++V LT GA V +
Sbjct: 597 LDSAADITQVTVL----DVPDPPENLHLSERQNRSVRLTWEA-GADHNSNISEYIVEFEG 651
Query: 255 NQKELTGGRYTILETGDLKITDVAFADSG----EYTCFARNKLGTAQGSGSLTVKEHTHI 310
N++E GR+ L K T V + ++ A N++G +Q S E
Sbjct: 652 NKEE--PGRWEELTRVQGKKTTVILPLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPA 709
Query: 311 T--DQPEDYEVEAGQSAT-------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS 361
P++ V+A Q + + P L+ + W P+++E E
Sbjct: 710 APDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEE----TV 765
Query: 362 NDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQ---VIDAKK 418
+++L V + +A +L ++T+ + P +I VI++
Sbjct: 766 TNHTLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTL 825
Query: 419 AVVSWNPVSPQSLRGHFRGYKVQTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPA 473
V+W+ V + G +GY++ W K DG +E+ + + G+ + V
Sbjct: 826 VKVTWSTVPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAF 885
Query: 474 SKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGV 533
S+ VLA+N GP SE F TPEGVP L+ I + L W P++ NG
Sbjct: 886 SEFHLTVLAYNSKGAGPESEPYIFQTPEGVPEQPTFLKVIKVDKDTATLSWGLPKKLNGN 945
Query: 534 LMGYKIKYQSVKGT-KVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
L GY ++YQ + T ++G L + I+ P+ S L+ L +TKY+ +L T G G
Sbjct: 946 LTGYLLQYQIINDTYEIGELNDI--NITTPSKPSWHLSNLNATTKYKFYLRACTSQGCG 1002
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 170/414 (41%), Gaps = 46/414 (11%)
Query: 52 ELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLIIKHVEFSD-QGSYTCEVSN 108
++ C G P P W+KDG P +D I N G I S QG Y C SN
Sbjct: 54 QIECEAKGNPEPTFSWTKDGNPFYFTDHRIIPSNNSGTFRIPNEGHISHFQGKYRCFASN 113
Query: 109 GVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVH-NGKP 165
+G A S I+ V + P F E + + E + + C GLP I+W++ +
Sbjct: 114 KLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIELEH 173
Query: 166 ISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-NSLGYVYKDVYVNVLAHA----- 218
I Q + G + N+ + D+ N Y C A L + + + + + ++
Sbjct: 174 IEQDERVYMSQKG--DLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNSIK 231
Query: 219 ---PEITEAPKDEYT------VDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILET 269
P++ P + + + G+ ++L C G P P+V+W +L GR T
Sbjct: 232 QRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKGRETKENY 291
Query: 270 GD-LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFR 328
G LKI +V++ D G Y C A N LGTA + V+E T +P+ G +
Sbjct: 292 GKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKKPQSAVYSTGSNGILL 351
Query: 329 CNAVSDPSLKLSIVWLRGSEPID---------FESEPRF--VQSNDYSLTVTKSSELDSG 377
C A +P + +I W P+D F E F +Q N ++ ++S +
Sbjct: 352 CEAEGEP--QPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHG- 408
Query: 378 QYTCRAQTELDFIEAQATLTVQ-----VPLEAPSNFTLIQVIDAKKAVVSWNPV 426
T A +D ++ + + + + S F + + +AVVSW V
Sbjct: 409 --TILANANIDVVDVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV 460
Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 111/293 (37%), Gaps = 31/293 (10%)
Query: 140 EETVTFECKASGLPEPEIHWVHNGKP--ISQAPPNPRRKVGPNRITIENLRKSDTGNYGC 197
+E EC+A G PEP W +G P + P G RI E G Y C
Sbjct: 50 DEYFQIECEAKGNPEPTFSWTKDGNPFYFTDHRIIPSNNSGTFRIPNEGHISHFQGKYRC 109
Query: 198 NATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCR-VFGAPKPEVNWIHN 255
A+N LG + ++ P+ + D V +G +VL C G P + W++
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNI 169
Query: 256 QKELT--GGRYTILETGDLKITDVAFADS-GEYTCFA---RNKLGTAQGSGSLTVKEHTH 309
+ E R + + GDL +V DS +Y CFA R + + LTV
Sbjct: 170 ELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNS 229
Query: 310 ITDQ-------PEDYEVEA------GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP 356
I + P + E+ G+ C A P+ ++ + G P E++
Sbjct: 230 IKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKGRETKE 289
Query: 357 RFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFT 409
+ + +L + S D G Y C A L AT V +E P +T
Sbjct: 290 NYGK----TLKIENVSYQDKGNYRCTASNFL----GTATHDFHVIVEEPPRWT 334
>sp|Q12860|CNTN1_HUMAN Contactin-1 OS=Homo sapiens GN=CNTN1 PE=1 SV=1
Length = 1018
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 185/728 (25%), Positives = 294/728 (40%), Gaps = 90/728 (12%)
Query: 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
P V K AL + V L C G P+P W K P+ + IS G L I
Sbjct: 241 PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 298
Query: 93 HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
+++ D+G Y CE N G+ K + + V A P + E IN E + + + C A
Sbjct: 299 NIQLEDEGIYECEAENIRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 354
Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
+G P P I W+ NG + ++ +T EN G Y C A N+ G +Y +
Sbjct: 355 TGKPIPTIRWLKNGYAYHKG------ELRLYDVTFEN-----AGMYQCIAENTYGAIYAN 403
Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
+ +LA AP E+ K G V++ C+ APKP+ +W + L R I
Sbjct: 404 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 463
Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
E G L+I ++ D G YTCFA N G A +G+L + + T I P + ++ G++AT
Sbjct: 464 WEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENAT 523
Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
+C A DP+L L+ VW IDF E F+ ++ L + + +G+YTC
Sbjct: 524 MQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 583
Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
AQT +D A A L V+ P P I+ I A ++W+ S Y +Q
Sbjct: 584 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYTIQ 640
Query: 442 TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
T T D + + + + +G +P + RV+A N G PS + +
Sbjct: 641 TKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNRIK 700
Query: 500 PEGVPGTVQSLEAIPLG--SSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLER 555
+G V + G + + W + E G GY + ++ G + +
Sbjct: 701 TDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVT 760
Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFY-----VPFKNPDNVEG 610
P D K + PST +++ + + GDG S P + P V
Sbjct: 761 NP---DTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGV 817
Query: 611 RGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPT 670
+ + + + + W + +E ++ R +W H+ EA N+ V T
Sbjct: 818 KVLSSSEISVHWEHV--LEKIVESYQIR-YWAAHDKEEAANRVQV--------------T 860
Query: 671 FQPYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 730
Q Y + ++ +P ++ F V A N A GPP
Sbjct: 861 SQEY----------------------------SARLENLLPDTQYFIEVGACNSAGCGPP 892
Query: 731 SEIISFVT 738
S++I T
Sbjct: 893 SDMIEAFT 900
Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 153/657 (23%), Positives = 245/657 (37%), Gaps = 85/657 (12%)
Query: 80 ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
+SQ N +L I +VE SD+G+Y+C VS+ +S + ++ P T +P
Sbjct: 189 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVV 246
Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
+F + A + VT EC A G P P+I W +P+ P + I N++
Sbjct: 247 QFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 303
Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
D G Y C A N G + V A PE E D G + C G P P +
Sbjct: 304 DEGIYECEAENIRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 362
Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
W+ N G Y G+L++ DV F ++G Y C A N G + L +
Sbjct: 363 RWLKN-----GYAY---HKGELRLYDVTFENAGMYQCIAENTYGAIYANAELKILALAPT 414
Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
+ P ++ A G C + P K S W +G+E + S R + D SL
Sbjct: 415 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 470
Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
+ + D G YTC A+ + TL + P + AP N + +A + S+
Sbjct: 471 INNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASF 530
Query: 424 NPVSPQSLRGHFRGYKVQ-----------TWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
+P + F GY + + +GE IR + T V
Sbjct: 531 DPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVD 590
Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
S A ++ G PG L + +++ L W + +
Sbjct: 591 NSSASADLVV------------------RGPPGPPGGLRIEDIRATSVALTWSRGSDNHS 632
Query: 533 VLMGYKIKYQSV-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
+ Y I+ +++ K K P I + +A+ L P +Y +
Sbjct: 633 PISKYTIQTKTILSDDWKDAKTDPP------IIEGNMEAARAVDLIPWMEYEFRVVATNT 686
Query: 588 AGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
G G S K P P +V G G L I+W + H +F Y + +
Sbjct: 687 LGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAF 746
Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
+ + GE W + V + V ++ T P +++KV + DG S+ +I
Sbjct: 747 KPFD-GEEWKKVTVTNPDTGRYVHKDE-TMSPSTAFQVKVKAFNNKGDGPYSLVAVI 801
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 140/373 (37%), Gaps = 48/373 (12%)
Query: 50 KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
KV L C +P P W + ++ SDR S G +L+I + + D G Y C S
Sbjct: 60 KVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 117
Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
N G +S LS P+ E + E + + C +P H
Sbjct: 118 NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 171
Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
W+ N P+ + RR V + I N+ SD GNY C ++ + K V+
Sbjct: 172 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 228
Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
L PE T P KD Y + G+ V L C G P P++ W + +
Sbjct: 229 LIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 288
Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
LKI ++ D G Y C A N G + + V+ + D EV+ G
Sbjct: 289 STSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 348
Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
+ C A P +I WL+ + E R Y +T ++G Y C A+
Sbjct: 349 YWPCVATGKPI--PTIRWLKNGYAY-HKGELRL-----YDVTFE-----NAGMYQCIAEN 395
Query: 386 ELDFIEAQATLTV 398
I A A L +
Sbjct: 396 TYGAIYANAELKI 408
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)
Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
P T+ PE + E V+ C+A P P W N + + VG N +
Sbjct: 47 PINTIYPE---ESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTS-DRYSMVGGNLVINN 102
Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
++ D G Y C A+N+ G V + + E V +GK +VL C +
Sbjct: 103 PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 162
Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
P W+ N+ + R+ G+L I +V +D G Y+CF + T
Sbjct: 163 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 222
Query: 299 SGSLT----VKEHT------HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
+ E T I Q +D GQ+ T C A+ +P I W + E
Sbjct: 223 FSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV--PDIRWRKVLE 280
Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
P+ +E + ++ L + D G Y C A+ + QA + VQ
Sbjct: 281 PMPSTAE---ISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 328
Score = 42.4 bits (98), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 8/144 (5%)
Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
P EAP+ ++V+ + + V W V L Y+++ W D E + + V
Sbjct: 808 PSEAPTEVG-VKVLSSSEISVHWEHV----LEKIVESYQIRYWAAHDKEEAANRVQVTSQ 862
Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
E + ++ +P ++ F V A N A GPPS++I T + P + + S +
Sbjct: 863 E-YSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKAPPSQPPRIISSVRSGSRY 921
Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
+ W V + GYK+ Y+
Sbjct: 922 IITWDHVVALSNESTVTGYKVLYR 945
>sp|P22063|CNTN2_RAT Contactin-2 OS=Rattus norvegicus GN=Cntn2 PE=1 SV=1
Length = 1040
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 171/629 (27%), Positives = 274/629 (43%), Gaps = 57/629 (9%)
Query: 45 ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
AL ++V L C G P+P+ W K ++P ++ +L I V F D+G+Y C
Sbjct: 253 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWATAE----PTLQIPSVSFEDEGTYEC 308
Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
E N G + + V A P + A + + C A+G P P + W+ NG+
Sbjct: 309 EAENSKGR-DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPMVRWLRNGE 367
Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
P++ R +V + L D+G Y C A N G +Y + V A AP+ +
Sbjct: 368 PLAS---QNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRQN 424
Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
P G + + C+ APK + W + L R T+ G L I +++ +D
Sbjct: 425 PVRRLIPAARGGEISILCQPRAAPKATILWSKGTEILGNSTRVTVTSDGTLIIRNISRSD 484
Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
G+YTCFA N +G A +G L+V++ T IT P ++ G + T +C+A DP++ L+
Sbjct: 485 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGDNLTLQCHASHDPTMDLTF 544
Query: 342 VWLRGSEPIDFE---SEPRFVQSNDY--SLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
W PIDF+ R + + LT+ + G+YTC AQT +D +AT+
Sbjct: 545 TWTLDDFPIDFDKPGGHYRRASAKETIGDLTILNAHVRHGGKYTCMAQTVVDGTSKEATV 604
Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GSIR 453
V+ P P + + D +SW+ + H Y +Q T G+ +R
Sbjct: 605 LVRGPPGPPGGVVVRDIGDT-TVQLSWS----RGFDNHSPIAKYTLQARTPPSGKWKQVR 659
Query: 454 ELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGVPGTVQ 508
VN +G + T +V +P RV A N G +GP S+I T E VP
Sbjct: 660 TNPVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSKI---RTKEAVPSVAP 716
Query: 509 SLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQ-----SVKGTKV-GPLLERLPYI 559
S + G+ + W V E NG GY + ++ S + +V G + Y
Sbjct: 717 SGLSGGGGAPGELIINWTPVSREYQNGDGFGYLLSFRRQGSSSWQTARVPGADAQYFVYG 776
Query: 560 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGST 614
+D ++P T + + + Y + GDG ES L Y P P V +GS+
Sbjct: 777 ND---------SIQPYTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPAKVWAKGSS 827
Query: 615 PNNLVISWTAMPEIEHNAPHFKYRI-FWR 642
+ + +SW + + + N Y I +W+
Sbjct: 828 SSEMNVSWEPVLQ-DMNGILLGYEIRYWK 855
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 145/374 (38%), Gaps = 38/374 (10%)
Query: 50 KVELFCIFGGTPLPQTIWSKDGVPIN--PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
+V L C +P W +G +N P R Q G +I+ + D G Y C S
Sbjct: 58 QVTLACRARASPPATYRWKMNGTDMNLEPGSR-HQLMGGNLVIMSPTKTQDAGVYQCLAS 116
Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIH-------W 159
N VG S L F EF + T E LP P H W
Sbjct: 117 NPVGTVVSKEAVLR------FGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYRW 170
Query: 160 VHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY-----V 212
+ N P + P + R V + I SD GNY C AT+ + + K V+ +
Sbjct: 171 LLNEFP-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQL 229
Query: 213 NVLAHAPEI------TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
N+ A P + P + Y + G+ V L C FG P P + W L+ T
Sbjct: 230 NLAAEDPRLFAPSIKARFPPETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWATA 289
Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
T L+I V+F D G Y C A N G G + V+ D E + G +
Sbjct: 290 EPT--LQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNLR 347
Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
+ C A P + + WLR EP+ ++ + + L +K S DSG Y C A+ +
Sbjct: 348 WGCAAAGKP--RPMVRWLRNGEPLASQNRVEVLAGD---LRFSKLSLEDSGMYQCVAENK 402
Query: 387 LDFIEAQATLTVQV 400
I A A L VQ
Sbjct: 403 HGTIYASAELAVQA 416
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 153/655 (23%), Positives = 241/655 (36%), Gaps = 77/655 (11%)
Query: 88 SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
+L I SD G+Y+C + S +K ++L+ L AP P
Sbjct: 193 NLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPPETY 252
Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
A + VT EC A G P P I W +S P+ + I ++ D G Y
Sbjct: 253 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-----PQWATAEPTLQIPSVSFEDEGTYE 307
Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
C A NS G + V A PE + D G + C G P+P V W+ N
Sbjct: 308 CEAENSKGRDTVQGRIIVQAQ-PEWLKVISDTEADIGSNLRWGCAAAGKPRPMVRWLRNG 366
Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
+ L + GDL+ + ++ DSG Y C A NK GT S L V+ P
Sbjct: 367 EPLASQNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRQNPV 426
Query: 316 DYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
+ A G + C + P K +I+W +G+E + + R ++D +L + S
Sbjct: 427 RRLIPAARGGEISILCQPRAAP--KATILWSKGTEILGNST--RVTVTSDGTLIIRNISR 482
Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APS--------NFTLIQVIDAKKAVV- 421
D G+YTC A+ + + L+V+ + APS N TL Q + +
Sbjct: 483 SDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGDNLTL-QCHASHDPTMD 541
Query: 422 ---SWN----PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
+W P+ GH+R + E G+ +I V G T V +
Sbjct: 542 LTFTWTLDDFPIDFDKPGGHYRRASAK---ETIGDLTILNAHVRHGGKYTCMAQTVVDGT 598
Query: 475 KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
A VL + +G + L W + + +
Sbjct: 599 SKEATVLVRGPPG------------------PPGGVVVRDIGDTTVQLSWSRGFDNHSPI 640
Query: 535 MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
Y ++ ++ K + P + +A++ GL P Y ++ G G S
Sbjct: 641 AKYTLQARTPPSGKWKQVRTN-PVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPS 699
Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
+ VP P + G G P L+I+WT + N F Y + +RR +
Sbjct: 700 GPSSKIRTKEAVPSVAPSGLSGGGGAPGELIINWTPVSREYQNGDGFGYLLSFRRQGS-S 758
Query: 649 AWNQDDVLDWRQSELVLAN---QPTFQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
+W V V N QP + P+E+K+ DG S+ L+ + E
Sbjct: 759 SWQTARVPGADAQYFVYGNDSIQP-YTPFEVKIRSYNRRGDGPESLTALVYSAEE 812
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 142/607 (23%), Positives = 228/607 (37%), Gaps = 70/607 (11%)
Query: 55 CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
C G P P W ++G P+ +R+ L + D G Y C N G
Sbjct: 350 CAAAGKPRPMVRWLRNGEPLASQNRVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTIY 407
Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
+ S +L+V A AP F P I AA ++ C+ P+ I W + + +
Sbjct: 408 A-SAELAVQALAPDFRQNPVRRLIPAARGGEISILCQPRAAPKATILWSKGTEILGNST- 465
Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
R V + + I N+ +SD G Y C A N +G ++V A +IT AP
Sbjct: 466 --RVTVTSDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 522
Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
G + L C P ++ + + GG Y + ET GDL I +
Sbjct: 523 NVGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRASAKETIGDLTILNAHVR 582
Query: 281 DSGEYTCFARNKL-GTAQGSGSLTVKEHTHITDQPE----DYEVEAGQS---------AT 326
G+YTC A+ + GT++ + L D V+ S A
Sbjct: 583 HGGKYTCMAQTVVDGTSKEATVLVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAK 642
Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQYT 380
+ A + PS K V + P++ E Q DY V+ S+ L +G+ +
Sbjct: 643 YTLQARTPPSGKWKQV---RTNPVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPS 699
Query: 381 CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKV 440
+++ EA ++ + +++W PVS + G GY +
Sbjct: 700 G-PSSKIRTKEAVPSVAPSG--------LSGGGGAPGELIINWTPVSREYQNGDGFGYLL 750
Query: 441 QTWTEKDGEGSIRELIVNKGEST--TTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV 498
+ G S + V ++ D P + ++ ++N +GP S
Sbjct: 751 SF--RRQGSSSWQTARVPGADAQYFVYGNDSIQPYTPFEVKIRSYNRRGDGPESLTALVY 808
Query: 499 TPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKGTKVGPLLERL 556
+ E P + + A SS + W Q NG+L+GY+I+Y + R
Sbjct: 809 SAEEEPRVAPAKVWAKGSSSSEMNVSWEPVLQDMNGILLGYEIRYWKAGDNEAAADRVRT 868
Query: 557 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTPN 616
+ TSA++ GL P+TKY + + Y +AG G S + K P P
Sbjct: 869 AGLD----TSARVTGLNPNTKYHVTVRAYNRAGTGPASPSADAMTVKPPPR-----RPPG 919
Query: 617 NLVISWT 623
N ISWT
Sbjct: 920 N--ISWT 924
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 116/298 (38%), Gaps = 30/298 (10%)
Query: 125 APYFTVEP---EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
P F +P F + E+ VT C+A P W NG ++ P + + +G N
Sbjct: 38 GPIFEEQPIGLLFPEESAEDQVTLACRARASPPATYRWKMNGTDMNLEPGSRHQLMGGNL 97
Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-TVDGKTVVLTC 240
+ + + D G Y C A+N +G V V E ++ +D T +G V+L C
Sbjct: 98 VIMSPTKTQDAGVYQCLASNPVGTVVSKEAVLRFGFLQEFSKEERDPVKTHEGWGVMLPC 157
Query: 241 RVFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGT 295
P W+ N+ T GR+ + + TG+L I +D G Y+C A + +
Sbjct: 158 NPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDF 217
Query: 296 AQGSGSLTVKEHTHITDQ-------------PEDYEVEAGQSATFRCNAVSDPSLKLSIV 342
+ S + + PE Y + GQ T C A +P + I
Sbjct: 218 STKSVFSKFAQLNLAAEDPRLFAPSIKARFPPETYAL-VGQQVTLECFAFGNPVPR--IK 274
Query: 343 WLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
W + +D P++ + + +L + S D G Y C A+ Q + VQ
Sbjct: 275 WRK----VDGSLSPQWATA-EPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQA 327
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 81/185 (43%), Gaps = 9/185 (4%)
Query: 35 QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHV 94
+Q R+ A R ++ + C P +WSK + S R++ + G +LII+++
Sbjct: 422 RQNPVRRLIPAARGGEISILCQPRAAPKATILWSKGTEILGNSTRVTVTSDG-TLIIRNI 480
Query: 95 EFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPE 154
SD+G YTC N +G+A S I LSV A T+ P + + +T +C AS P
Sbjct: 481 SRSDEGKYTCFAENFMGKANSTGI-LSVRDATKITLAPSSADINVGDNLTLQCHASHDPT 539
Query: 155 PEI--HWVHNGKPISQAPP--NPRRKVGPNRI---TIENLRKSDTGNYGCNATNSLGYVY 207
++ W + PI P + RR I TI N G Y C A +
Sbjct: 540 MDLTFTWTLDDFPIDFDKPGGHYRRASAKETIGDLTILNAHVRHGGKYTCMAQTVVDGTS 599
Query: 208 KDVYV 212
K+ V
Sbjct: 600 KEATV 604
>sp|Q61330|CNTN2_MOUSE Contactin-2 OS=Mus musculus GN=Cntn2 PE=2 SV=2
Length = 1040
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 168/626 (26%), Positives = 268/626 (42%), Gaps = 51/626 (8%)
Query: 45 ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
AL ++V L C G P+P+ W K ++P G +L I V F D+G+Y C
Sbjct: 253 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQ----WGTAEPTLQIPSVSFEDEGTYEC 308
Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
E N G + + V A P + A + + C A+G P P + W+ NG+
Sbjct: 309 EAENSKGR-DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPMVRWLRNGE 367
Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
P++ R +V + L D+G Y C A N G +Y + V A AP+ +
Sbjct: 368 PLAS---QNRVEVLAGDLRFSKLNLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRQN 424
Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFAD 281
P G + + C+ APK + W + L R T+ G L I +++ +D
Sbjct: 425 PVRRLIPAARGGEISIPCQPRAAPKATILWSKGTEILGNSTRVTVTLDGTLIIRNISRSD 484
Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
G+YTCFA N +G A +G L+V++ T IT P ++ G + T +C+A DP++ L+
Sbjct: 485 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGDNLTLQCHASHDPTMDLTF 544
Query: 342 VWLRGSEPIDFES-----EPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
W P+DF+ V+ LT+ + G YTC AQT +D +AT+
Sbjct: 545 TWTLDDFPVDFDKPGGHYRRASVKETIGDLTILNAQLRHGGTYTCMAQTVVDGASKEATV 604
Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GSIR 453
V+ P P + + D +SW+ + H Y +Q T G+ +R
Sbjct: 605 LVRGPPGPPGGVVVRDIGDT-TVQLSWS----RGFDNHSPIAKYTLQARTPPSGKWKQVR 659
Query: 454 ELIVN-KGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQSLE 511
VN +G + T +V +P RV A N G PS S + T E VP S
Sbjct: 660 TNPVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSRIRTKEAVPSVAPSGL 719
Query: 512 AIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQ-----SVKGTKV-GPLLERLPYISDP 562
+ G+ + W + E NG GY + ++ S + +V G + Y +D
Sbjct: 720 SGGGGAPGELTINWTPMSREYQNGDGFGYLLSFRRQGSSSWQTARVPGADTQYFVYSND- 778
Query: 563 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGSTPNN 617
+ P T + + + Y + GDG ES + Y P P V +GS+ +
Sbjct: 779 --------SIHPYTPFEVKIRSYNRRGDGPESLTAIVYSAEEEPKVAPAKVWAKGSSSSE 830
Query: 618 LVISWTAMPEIEHNAPHFKYRI-FWR 642
+ +SW + + + N Y I +W+
Sbjct: 831 MNVSWEPVLQ-DMNGILLGYEIRYWK 855
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 145/374 (38%), Gaps = 38/374 (10%)
Query: 50 KVELFCIFGGTPLPQTIWSKDGVPIN--PSDRISQGNYGKSLIIKHVEFSDQGSYTCEVS 107
+V L C +P W +G +N P R Q G +I+ + D G Y C S
Sbjct: 58 QVTLACRARASPPATYRWKMNGTEMNLEPGSR-HQLMGGNLVIMSPTKAQDAGVYQCLAS 116
Query: 108 NGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLP-EPEIH-------W 159
N VG S L F EF + T E LP P H W
Sbjct: 117 NPVGTVVSKEAVLR------FGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYRW 170
Query: 160 VHNGKPISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY-----V 212
+ N P + P + R V + I SD GNY C AT+ L + K V+ +
Sbjct: 171 LLNEFP-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHLDFSTKSVFSKFAQL 229
Query: 213 NVLAHAPEI------TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTI 266
N+ A P + P + Y + G+ V L C FG P P + W L+ T
Sbjct: 230 NLAAEDPRLFAPSIKARFPPETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWGTA 289
Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
T L+I V+F D G Y C A N G G + V+ D E + G +
Sbjct: 290 EPT--LQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNLR 347
Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTE 386
+ C A P + + WLR EP+ ++ + + L +K + DSG Y C A+ +
Sbjct: 348 WGCAAAGKP--RPMVRWLRNGEPLASQNRVEVLAGD---LRFSKLNLEDSGMYQCVAENK 402
Query: 387 LDFIEAQATLTVQV 400
I A A L VQ
Sbjct: 403 HGTIYASAELAVQA 416
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 152/654 (23%), Positives = 239/654 (36%), Gaps = 75/654 (11%)
Query: 88 SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
+L I SD G+Y+C + S +K ++L+ L AP P
Sbjct: 193 NLYIARTNASDLGNYSCLATSHLDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPPETY 252
Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
A + VT EC A G P P I W +S P+ + I ++ D G Y
Sbjct: 253 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-----PQWGTAEPTLQIPSVSFEDEGTYE 307
Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
C A NS G + V A PE + D G + C G P+P V W+ N
Sbjct: 308 CEAENSKGRDTVQGRIIVQAQ-PEWLKVISDTEADIGSNLRWGCAAAGKPRPMVRWLRNG 366
Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
+ L + GDL+ + + DSG Y C A NK GT S L V+ P
Sbjct: 367 EPLASQNRVEVLAGDLRFSKLNLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRQNPV 426
Query: 316 DYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
+ A G + C + P K +I+W +G+E + + R + D +L + S
Sbjct: 427 RRLIPAARGGEISIPCQPRAAP--KATILWSKGTEILGNST--RVTVTLDGTLIIRNISR 482
Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLE---APS--------NFTLIQVIDAKKAVV- 421
D G+YTC A+ + + L+V+ + APS N TL Q + +
Sbjct: 483 SDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGDNLTL-QCHASHDPTMD 541
Query: 422 ---SWN----PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPAS 474
+W PV GH+R V+ E G+ +I + G + T V +
Sbjct: 542 LTFTWTLDDFPVDFDKPGGHYRRASVK---ETIGDLTILNAQLRHGGTYTCMAQTVVDGA 598
Query: 475 KNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVL 534
A VL + +G + L W + + +
Sbjct: 599 SKEATVLVRGPPG------------------PPGGVVVRDIGDTTVQLSWSRGFDNHSPI 640
Query: 535 MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
Y ++ ++ K + P + +A++ GL P Y ++ G G S
Sbjct: 641 AKYTLQARTPPSGKWKQVRTN-PVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPS 699
Query: 595 ------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGE 648
+ VP P + G G P L I+WT M N F Y + +RR +
Sbjct: 700 GPSSRIRTKEAVPSVAPSGLSGGGGAPGELTINWTPMSREYQNGDGFGYLLSFRRQGS-S 758
Query: 649 AWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
+W V V +N + P+E+K+ DG S+ ++ + E
Sbjct: 759 SWQTARVPGADTQYFVYSNDSIHPYTPFEVKIRSYNRRGDGPESLTAIVYSAEE 812
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 144/611 (23%), Positives = 230/611 (37%), Gaps = 78/611 (12%)
Query: 55 CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
C G P P W ++G P+ +R+ L + D G Y C N G
Sbjct: 350 CAAAGKPRPMVRWLRNGEPLASQNRVEV--LAGDLRFSKLNLEDSGMYQCVAENKHGTIY 407
Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
+ S +L+V A AP F P I AA ++ C+ P+ I W + + +
Sbjct: 408 A-SAELAVQALAPDFRQNPVRRLIPAARGGEISIPCQPRAAPKATILWSKGTEILGNST- 465
Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
R V + + I N+ +SD G Y C A N +G ++V A +IT AP
Sbjct: 466 --RVTVTLDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 522
Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
G + L C P ++ + + GG Y ++ ET GDL I +
Sbjct: 523 NVGDNLTLQCHASHDPTMDLTFTWTLDDFPVDFDKPGGHYRRASVKETIGDLTILNAQLR 582
Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPE-----DYEVEAGQS---------AT 326
G YTC A+ + A ++ V+ D V+ S A
Sbjct: 583 HGGTYTCMAQTVVDGASKEATVLVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAK 642
Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQYT 380
+ A + PS K V + P++ E Q DY V+ S+ L +G+ +
Sbjct: 643 YTLQARTPPSGKWKQV---RTNPVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPS 699
Query: 381 ---CRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRG 437
R +T+ +A +V + ++ ++W P+S + G G
Sbjct: 700 GPSSRIRTK------EAVPSVAPSGLSGGGGAPGEL------TINWTPMSREYQNGDGFG 747
Query: 438 YKVQTWTEKDGEGSIRELIVNKGESTTTEV---DKFVPASKNFARVLAFNGAYNGPPSEI 494
Y + + G S + V G T V D P + ++ ++N +GP S
Sbjct: 748 YLLSF--RRQGSSSWQTARV-PGADTQYFVYSNDSIHPYTPFEVKIRSYNRRGDGPESLT 804
Query: 495 ISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKGTKVGPL 552
+ E P + + A SS + W Q NG+L+GY+I+Y +
Sbjct: 805 AIVYSAEEEPKVAPAKVWAKGSSSSEMNVSWEPVLQDMNGILLGYEIRYWKAGDKEAAAD 864
Query: 553 LERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRG 612
R + +SA++ GL P+TKY + + Y +AG G S + K P
Sbjct: 865 RVRTAGLD----SSARVTGLYPNTKYHVTVRAYNRAGTGPASPSADAMTMKPPPR----- 915
Query: 613 STPNNLVISWT 623
P N ISWT
Sbjct: 916 RPPGN--ISWT 924
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 119/308 (38%), Gaps = 30/308 (9%)
Query: 115 SYSIDLSVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
S+S P F +P F + E+ VT C+A P W NG ++ P
Sbjct: 28 SFSQGTPATFGPVFEEQPVGLLFPEESAEDQVTLACRARASPPATYRWKMNGTEMNLEPG 87
Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEY-T 230
+ + +G N + + + D G Y C A+N +G V V E ++ +D T
Sbjct: 88 SRHQLMGGNLVIMSPTKAQDAGVYQCLASNPVGTVVSKEAVLRFGFLQEFSKEERDPVKT 147
Query: 231 VDGKTVVLTCRVFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEY 285
+G V+L C P W+ N+ T GR+ + + TG+L I +D G Y
Sbjct: 148 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 207
Query: 286 TCFARNKLGTAQGSGSLTVKEHTHITDQ-------------PEDYEVEAGQSATFRCNAV 332
+C A + L + S + + PE Y + GQ T C A
Sbjct: 208 SCLATSHLDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPPETYAL-VGQQVTLECFAF 266
Query: 333 SDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEA 392
+P + I W + +D P++ + + +L + S D G Y C A+
Sbjct: 267 GNPVPR--IKWRK----VDGSLSPQW-GTAEPTLQIPSVSFEDEGTYECEAENSKGRDTV 319
Query: 393 QATLTVQV 400
Q + VQ
Sbjct: 320 QGRIIVQA 327
>sp|Q28106|CNTN1_BOVIN Contactin-1 OS=Bos taurus GN=CNTN1 PE=2 SV=1
Length = 1018
Score = 166 bits (421), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 182/718 (25%), Positives = 285/718 (39%), Gaps = 80/718 (11%)
Query: 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
P V K AL + V L C G P+P W K P+ + IS G L I
Sbjct: 241 PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 298
Query: 93 HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
+++ D+G Y CE N G+ K + + V A P + E IN E + + + C A
Sbjct: 299 NIQLEDEGIYECEAENNRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 354
Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
+G P P I W+ NG R ++ +T EN G Y C A N+ G +Y +
Sbjct: 355 TGKPIPTIRWLKNGYSYH------RGELRLYDVTFEN-----AGMYQCIAENTHGAIYAN 403
Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
+ +LA AP E+ K G V++ C+ APKP W + L R I
Sbjct: 404 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPTFLWSKGTERLVNSSRILI 463
Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
E G L+I ++ +D G YTCF N G A +G+L + + T I P + ++ G++AT
Sbjct: 464 WEDGSLEINNITRSDGGVYTCFVENNKGKANSTGTLVITDPTRIILAPINADITVGENAT 523
Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-----PRFVQSNDYSLTVTKSSELDSGQYTC 381
+C A DP+L L+ VW IDF E F+ ++ L + + +G+YTC
Sbjct: 524 MQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTC 583
Query: 382 RAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ 441
AQT +D A A L V+ P P I+ I A ++W+ S Y +Q
Sbjct: 584 TAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYTIQ 640
Query: 442 TWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
T T D + + + + +G +P + RV+A N G PS + +
Sbjct: 641 TKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIK 700
Query: 500 PEGVPGTVQSLEAIPLGSS--AFYLKWVKPEQPNGVL--MGYKIKYQSVKGTKVGPLLER 555
+G V + G S + W + GY + ++ G + +
Sbjct: 701 TDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYFNNFGYIVAFKPFDGEEWKKVTVT 760
Query: 556 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGSTP 615
P D K + PST +++ + + GDG S L V D P
Sbjct: 761 NP---DTGRYVHKDETMRPSTAFQVKVKAFNNKGDGPYS--LTAVIHSAQD---APSEAP 812
Query: 616 NNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYE 675
+ + + EI + H +I + Y+
Sbjct: 813 TAVGVKVLSSSEISVHWEHVVEKI-------------------------------VESYQ 841
Query: 676 IKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEI 733
I+ W D E + + V E + ++ +P ++ F V A N A GPPS++
Sbjct: 842 IRY---WASHDKEAAAHRVQVASQE-YSARLENLLPDTQYFVEVRACNSAGCGPPSDM 895
Score = 96.7 bits (239), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 152/657 (23%), Positives = 249/657 (37%), Gaps = 85/657 (12%)
Query: 80 ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
+SQ N +L I +VE SD+G+Y+C VS+ +S + ++ P T +P
Sbjct: 189 VSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTKPYPADIVV 246
Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
+F + A + VT EC A G P P+I W +P+ P + I N++
Sbjct: 247 QFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 303
Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
D G Y C A N+ G + V A PE E D G + C G P P +
Sbjct: 304 DEGIYECEAENNRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 362
Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
W+ N G Y G+L++ DV F ++G Y C A N G + L +
Sbjct: 363 RWLKN-----GYSY---HRGELRLYDVTFENAGMYQCIAENTHGAIYANAELKILALAPT 414
Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
+ P ++ A G C + P K + +W +G+E + S R + D SL
Sbjct: 415 FEMNPMKKKILAAKGGRVIIECKPKAAP--KPTFLWSKGTERLVNSS--RILIWEDGSLE 470
Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
+ + D G YTC + + TL + P + AP N + +A + S+
Sbjct: 471 INNITRSDGGVYTCFVENNKGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASF 530
Query: 424 NPVSPQSLRGHFRGYKVQ-----------TWTEKDGEGSIRELIVNKGESTTTEVDKFVP 472
+P + F GY + + +GE IR + T V
Sbjct: 531 DPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVD 590
Query: 473 ASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNG 532
S A ++ G PG L + +++ L W + +
Sbjct: 591 NSSASADLVV------------------RGPPGPPGGLRIEDIRATSVALTWSRGSDNHS 632
Query: 533 VLMGYKIKYQSV-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTK 587
+ Y I+ +++ K K P P I + +A+ L P +Y +
Sbjct: 633 PISKYTIQTKTILSDDWKDAKTDP-----PII-EGNMEAARAVDLIPWMEYEFRVVATNT 686
Query: 588 AGDGAES------KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFW 641
G G S K P P +V G G + L I+W + H +F Y + +
Sbjct: 687 LGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYFNNFGYIVAF 746
Query: 642 RRHNTGEAWNQDDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
+ + GE W + V + V ++ T +P +++KV + DG S+ +I
Sbjct: 747 KPFD-GEEWKKVTVTNPDTGRYVHKDE-TMRPSTAFQVKVKAFNNKGDGPYSLTAVI 801
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 139/373 (37%), Gaps = 48/373 (12%)
Query: 50 KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
KV L C +P P W + I+ SDR S G +L+I + + D G Y C S
Sbjct: 60 KVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 117
Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
N G +S LS P+ E + E + + C +P H
Sbjct: 118 NNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLC------DPPYHFPDDLSYR 171
Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
W+ N P+ + RR V + I N+ SD GNY C ++ + K V+
Sbjct: 172 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP--SITKSVFSKFIP 228
Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
L PE T P KD Y + G+ V L C G P P++ W + +
Sbjct: 229 LIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 288
Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
LKI ++ D G Y C A N G + + V+ + D EV+ G
Sbjct: 289 STSGAVLKIFNIQLEDEGIYECEAENNRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 348
Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
+ C A P +I WL+ E R Y +T ++G Y C A+
Sbjct: 349 YWPCVATGKPI--PTIRWLKNGYSY-HRGELRL-----YDVTFE-----NAGMYQCIAEN 395
Query: 386 ELDFIEAQATLTV 398
I A A L +
Sbjct: 396 THGAIYANAELKI 408
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 110/291 (37%), Gaps = 26/291 (8%)
Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
P T+ PE + E V+ C+A P P W N I + VG N +
Sbjct: 47 PINTIYPE---ESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTS-DRYSMVGGNLVINN 102
Query: 186 NLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV-F 243
++ D G Y C A+N+ G V + + E V +GK +VL C +
Sbjct: 103 PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPY 162
Query: 244 GAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQG 298
P W+ N+ + R+ G+L I +V +D G Y+CF + T
Sbjct: 163 HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 222
Query: 299 SGSL---------TVKEH-THITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSE 348
T K + I Q +D GQ+ T C A+ +P I W + E
Sbjct: 223 FSKFIPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV--PDIRWRKVLE 280
Query: 349 PIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
P+ +E + ++ L + D G Y C A+ + QA + VQ
Sbjct: 281 PMPSTAE---ISTSGAVLKIFNIQLEDEGIYECEAENNRGKDKHQARIYVQ 328
Score = 40.8 bits (94), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 8/144 (5%)
Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
P EAP+ ++V+ + + V W V + + Y+++ W D E + + V
Sbjct: 808 PSEAPTAVG-VKVLSSSEISVHWEHVVEKIVES----YQIRYWASHDKEAAAHRVQVASQ 862
Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
E + ++ +P ++ F V A N A GPPS++ T + P + + S +
Sbjct: 863 E-YSARLENLLPDTQYFVEVRACNSAGCGPPSDMTETFTKKAPPSQPPRIISSVRSGSRY 921
Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
+ W V + GYK+ Y+
Sbjct: 922 IITWDHVVALSNESTVTGYKVLYR 945
>sp|Q9JMB8|CNTN6_MOUSE Contactin-6 OS=Mus musculus GN=Cntn6 PE=2 SV=2
Length = 1028
Score = 166 bits (420), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 178/718 (24%), Positives = 296/718 (41%), Gaps = 82/718 (11%)
Query: 45 ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
A ++ ++L C G P+P W + DG P+ +I L I + D+G Y
Sbjct: 239 AAKDSSIKLECFALGNPVPDISWKRLDGSPM--PGKIKYSKSQAILEIPKFQQEDEGFYE 296
Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
C N G + L A P + + + + +++ +ECKASG P P W+ NG
Sbjct: 297 CIAGNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDSLFWECKASGNPNPSYTWLKNG 355
Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
+ ++ R ++ + I L SD+G Y C A N +Y + + VLA AP+ ++
Sbjct: 356 QRLNT---EERIQIENGTLIITMLNISDSGIYQCAAENKYQTIYANAELRVLASAPDFSK 412
Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
P + +V G + + C+ PK ++W + L R LE G LKI +V A
Sbjct: 413 NPIKKISVVQVGGDISIECKPNAFPKASISWKRGTENLKQSKRVLFLEDGSLKICNVTRA 472
Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
D+G YTC A N+ G + SG L VKE T IT P +V G+S C DP++++
Sbjct: 473 DAGSYTCVATNQFGNGKSSGGLVVKERTIITVPPSKMDVTVGESIVLPCQVSHDPTMEVL 532
Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
VW + ID + R + L + SG+Y C QT L+ + A A +
Sbjct: 533 FVWYFNGDIIDLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADI 592
Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
V+ P P + ++ I + + +SW P P + + + +QT T ++
Sbjct: 593 IVRGPPGPPEDVK-VEHISSTTSQLSWRP-GPDN-NSPIQIFTIQTRTPFSVGWQAVATV 649
Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-----TPEGVPGTV 507
E++ G++ V P + RV+A N G PS+ + P PG +
Sbjct: 650 PEIL--NGQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASVPNVAPGNI 707
Query: 508 QSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565
S + W + E NG GY + ++ V T + ER+ + + +
Sbjct: 708 NGGGG---SRSELVITWEAIPEELQNGEGFGYIVMFRPVGTTAW--MKERVALV-ESSKF 761
Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGST-----PNNLVI 620
+ + P + + + + Y G+G+ S ++ + RG++ + + +
Sbjct: 762 IYRNESIMPLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEV 821
Query: 621 SWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKVVQ 680
SW A+ AWN R + VL YE V
Sbjct: 822 SWNAI-----------------------AWN-------RNTGRVLG-------YE---VL 841
Query: 681 TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
WT+ E I ++ V+ G TT + + FA V A+N A GP S ++ T
Sbjct: 842 YWTDNSKESMIGKIRVS-GNVTTKNITGLRANTIYFASVRAYNTAGTGPSSLPVNVTT 898
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 161/653 (24%), Positives = 257/653 (39%), Gaps = 73/653 (11%)
Query: 88 SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLA---------APYFTVE-PEFINA 137
+L VE SD G+YTC V+N ++ P V PE I A
Sbjct: 180 NLYFAKVEPSDVGNYTCFVTNKEAHRSVQGPPTPLVLRTDGVMGEYEPKIEVRFPETIQA 239
Query: 138 AEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
A++ ++ EC A G P P+I W +G P+ P + + I ++ D G Y
Sbjct: 240 AKDSSIKLECFALGNPVPDISWKRLDGSPM---PGKIKYSKSQAILEIPKFQQEDEGFYE 296
Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
C A N G + + PE + ++ Y ++ C+ G P P W+ N
Sbjct: 297 CIAGNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDSLFWECKASGNPNPSYTWLKNG 355
Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQP- 314
+ L +E G L IT + +DSG Y C A NK T + L V + P
Sbjct: 356 QRLNTEERIQIENGTLIITMLNISDSGIYQCAAENKYQTIYANAELRVLASAPDFSKNPI 415
Query: 315 -EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSE 373
+ V+ G + C + P K SI W RG+E + + R + D SL + +
Sbjct: 416 KKISVVQVGGDISIECKPNAFP--KASISWKRGTE--NLKQSKRVLFLEDGSLKICNVTR 471
Query: 374 LDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV-----------VS 422
D+G YTC A + ++ L V+ T+I V +K V VS
Sbjct: 472 ADAGSYTCVATNQFGNGKSSGGLVVK-------ERTIITVPPSKMDVTVGESIVLPCQVS 524
Query: 423 WNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNF 477
+P +F G + E+ G S+ +L++ + K++ +
Sbjct: 525 HDPTMEVLFVWYFNGDIIDLKKGVAHFERIGGESVGDLMIRNIQ--LGHSGKYLCTVQTT 582
Query: 478 ARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGY 537
L+ ++ + G PG + ++ + S+ L W N + +
Sbjct: 583 LERLS-----------AVADIIVRGPPGPPEDVKVEHISSTTSQLSWRPGPDNNSPIQIF 631
Query: 538 KIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK- 595
I Q+ VG + +P I + T +A + GL P +Y + G G SK
Sbjct: 632 TI--QTRTPFSVGWQAVATVPEILNGQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKP 689
Query: 596 -----YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
VP P N+ G G + + LVI+W A+PE N F Y + +R T AW
Sbjct: 690 SELLRTKASVPNVAPGNINGGGGSRSELVITWEAIPEELQNGEGFGYIVMFRPVGT-TAW 748
Query: 651 NQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
++ V S+ + N+ P+E+KV +GEGS+ + IV GE
Sbjct: 749 MKERVALVESSKFIYRNESIMPLSPFEVKV--GVYNNEGEGSLSTVTIVYSGE 799
Score = 86.3 bits (212), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 146/631 (23%), Positives = 243/631 (38%), Gaps = 65/631 (10%)
Query: 55 CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
C G P P W K+G +N +RI N +LII + SD G Y C N +
Sbjct: 339 CKASGNPNPSYTWLKNGQRLNTEERIQIEN--GTLIITMLNISDSGIYQCAAENKY-QTI 395
Query: 115 SYSIDLSVLA-APYFTVEP-EFINAAE-EETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
+ +L VLA AP F+ P + I+ + ++ ECK + P+ I W + + Q+
Sbjct: 396 YANAELRVLASAPDFSKNPIKKISVVQVGGDISIECKPNAFPKASISWKRGTENLKQSKR 455
Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
+ G +I N+ ++D G+Y C ATN G K V+ IT P
Sbjct: 456 VLFLEDGSLKIC--NVTRADAGSYTCVATNQFGN-GKSSGGLVVKERTIITVPPSKMDVT 512
Query: 232 DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
G+++VL C+V P EV W N E GG GDL I ++
Sbjct: 513 VGESIVLPCQVSHDPTMEVLFVWYFNGDIIDLKKGVAHFERIGGE----SVGDLMIRNIQ 568
Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT----FRCNAVSD 334
SG+Y C + L + V+ PED +VE S T +R ++
Sbjct: 569 LGHSGKYLCTVQTTLERLSAVADIIVRGPP---GPPEDVKVEHISSTTSQLSWRPGPDNN 625
Query: 335 PSLKLSIVWLRGSEPIDFESE---PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
+++ + R + +++ P + Y+ TV S ++ A + E
Sbjct: 626 SPIQIFTIQTRTPFSVGWQAVATVPEILNGQTYNATVVGLSPWVEYEFRVVAGNNIGIGE 685
Query: 392 AQA-----TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
VP AP N + V++W + + G GY V
Sbjct: 686 PSKPSELLRTKASVPNVAPGNINGGGG-SRSELVITWEAIPEELQNGEGFGYIVMFRPVG 744
Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVP-- 504
+ + + + +P S +V +N G S + + E P
Sbjct: 745 TTAWMKERVALVESSKFIYRNESIMPLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQL 804
Query: 505 ---GT-VQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKVGPLLERLPY 558
GT VQS A + S + W + G ++GY++ Y + K + +G +
Sbjct: 805 APRGTSVQSFSASEMEVSWNAIAW---NRNTGRVLGYEVLYWTDNSKESMIGKI-----R 856
Query: 559 ISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPDNVEGRGS 613
+S TT + GL +T Y + Y AG G S + P + P N+ + S
Sbjct: 857 VSGNVTTK-NITGLRANTIYFASVRAYNTAGTGPSSLPVNVTTKKSPPSQPPANIAWKLS 915
Query: 614 TPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
+ L ++W + +E+ + Y+I +R++
Sbjct: 916 N-SKLCLNWEHVKTMENESEVLGYKILYRQN 945
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 135/378 (35%), Gaps = 40/378 (10%)
Query: 46 LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS-DQGSYTC 104
L ++ L C G P P W ++G I+ G SL I D G Y C
Sbjct: 41 LSRSEIILTCTANGYPSPHYRWKQNGTDIDFGMTYHYRLDGGSLAISSPRTDQDIGIYQC 100
Query: 105 EVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHW 159
+N VG S L F T ++ E + V C G P E W
Sbjct: 101 LATNPVGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLC---GPPPHFGELSYAW 157
Query: 160 VHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGY------------ 205
N P+ + RR V + + + SD GNY C TN +
Sbjct: 158 TFNDSPL-YVQEDKRRFVSQDTGNLYFAKVEPSDVGNYTCFVTNKEAHRSVQGPPTPLVL 216
Query: 206 ----VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG 261
V + + PE +A KD ++ L C G P P+++W
Sbjct: 217 RTDGVMGEYEPKIEVRFPETIQAAKD------SSIKLECFALGNPVPDISWKRLDGSPMP 270
Query: 262 GRYTILET-GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
G+ ++ L+I D G Y C A N G G L + ++ +
Sbjct: 271 GKIKYSKSQAILEIPKFQQEDEGFYECIAGNLRGRNLAKGQLIFYAPPEWEQKIQNTYLS 330
Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
S + C A +P+ S WL+ + ++ E +Q + +L +T + DSG Y
Sbjct: 331 IYDSLFWECKASGNPN--PSYTWLKNGQRLNTEER---IQIENGTLIITMLNISDSGIYQ 385
Query: 381 CRAQTELDFIEAQATLTV 398
C A+ + I A A L V
Sbjct: 386 CAAENKYQTIYANAELRV 403
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 14/190 (7%)
Query: 409 TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
T +Q A + VSWN ++ G GY+V WT+ E I ++ V+ G TT +
Sbjct: 809 TSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDNSKESMIGKIRVS-GNVTTKNIT 867
Query: 469 KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VK 526
+ FA V A+N A GP S ++ T + P + A L +S L W VK
Sbjct: 868 GLRANTIYFASVRAYNTAGTGPSSLPVNVTTKKSPPSQPPANIAWKLSNSKLCLNWEHVK 927
Query: 527 PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGY 585
+ ++GYKI Y+ + +K +I + TSA+L L P Y I +
Sbjct: 928 TMENESEVLGYKILYRQNRQSKT--------HILETNNTSAEL--LVPFEEDYLIEIRTV 977
Query: 586 TKAGDGAESK 595
+ GDG+ S+
Sbjct: 978 SDGGDGSSSE 987
Score = 59.7 bits (143), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 101/285 (35%), Gaps = 32/285 (11%)
Query: 123 LAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGP 179
+ P F EP+ F + C A+G P P W NG I R G
Sbjct: 23 FSRPIFIQEPQDVIFPLDLSRSEIILTCTANGYPSPHYRWKQNGTDIDFGMTYHYRLDGG 82
Query: 180 NRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVL 238
+ D G Y C ATN +G + A+ + + +V +G+ VVL
Sbjct: 83 SLAISSPRTDQDIGIYQCLATNPVGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVL 142
Query: 239 TCRVFGAPKPEVN-----WIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTCFA 289
C P P W N L R+ +TG+L V +D G YTCF
Sbjct: 143 LC----GPPPHFGELSYAWTFNDSPLYVQEDKRRFVSQDTGNLYFAKVEPSDVGNYTCFV 198
Query: 290 RNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPSLK 338
NK + QG + V + + PE + S C A+ +P
Sbjct: 199 TNKEAHRSVQGPPTPLVLRTDGVMGEYEPKIEVRFPETIQAAKDSSIKLECFALGNPVPD 258
Query: 339 LSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRA 383
+S L GS + ++ +S L + K + D G Y C A
Sbjct: 259 ISWKRLDGS---PMPGKIKYSKSQAI-LEIPKFQQEDEGFYECIA 299
>sp|P97528|CNTN6_RAT Contactin-6 OS=Rattus norvegicus GN=Cntn6 PE=1 SV=1
Length = 1028
Score = 166 bits (419), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 182/720 (25%), Positives = 300/720 (41%), Gaps = 86/720 (11%)
Query: 45 ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
A ++ V+L C G P+P W + DG P+ ++ N +L I + D+G Y
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGSPM--PGKVKYSNSQATLEIPKFQQEDEGFYE 296
Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
C N G + L A P + + + + +++ +ECKASG P P W+ NG
Sbjct: 297 CVAGNLRGRNLAKG-QLIFYAPPEWEQKIQNTYLSIYDSLFWECKASGNPNPSYTWLKNG 355
Query: 164 KPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITE 223
+ ++ R + + I L SD+G Y C A N +Y + + VLA AP+ ++
Sbjct: 356 ERLNT---EERIQTENGTLIITMLNVSDSGIYQCAAENKYQTIYANAELRVLASAPDFSK 412
Query: 224 APKDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQKEL-TGGRYTILETGDLKITDVAFA 280
P + +V G + + C+ PK ++W + L R LE G LKI +V +
Sbjct: 413 NPIKKISVVQVGGDISIECKPNAFPKASISWKRGTENLKQSKRVFFLEDGSLKICNVTRS 472
Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLS 340
D+G YTC A N+ G + SGSL VKE T IT P +V G+S C DP++++
Sbjct: 473 DAGSYTCVATNQFGNGKSSGSLIVKERTVITVPPSKMDVTVGESIVLPCQVSHDPTMEVL 532
Query: 341 IVWLRGSEPIDFESE----PRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
VW + ID + R + L + SG+Y C QT L+ + A A +
Sbjct: 533 FVWYFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADI 592
Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK----DGEGSI 452
V+ P P + ++ I + + +SW P P + + + +QT T ++
Sbjct: 593 IVRGPPGPPEDVK-VEHISSTTSQLSWRP-GPDN-NSPIQIFTIQTRTPFSVGWQAVATV 649
Query: 453 RELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFV-TPEGVPGTVQ-SL 510
E++ G++ V P + RV+A N G PS+ + T +P ++
Sbjct: 650 PEIL--NGQTYNATVIGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASIPNVAPVNI 707
Query: 511 EAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT-----KVGPLLERLPYISDPT 563
S + W + E NG GY I ++ V T KV L+E +I
Sbjct: 708 NGGGGSRSELVITWEPIPEELQNGEGFGYIIMFRPVGSTTWMKEKVA-LVESSKFI---- 762
Query: 564 TTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVEGRGST-----PNNL 618
+ + P + + + + Y G+G+ S ++ + RG++ +++
Sbjct: 763 ---YRNESIMPLSPFEVKVGVYNNEGEGSLSTVSIVYSGEDEPRLAPRGTSVQSFSASDM 819
Query: 619 VISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQPYEIKV 678
+SW A+ AWN R + VL YE
Sbjct: 820 EVSWNAI-----------------------AWN-------RNTGRVLG-------YE--- 839
Query: 679 VQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 738
V WT+ E I ++ V+ G TT + + FA V A+N A GP S ++ T
Sbjct: 840 VLYWTDNSKESMIGKIRVS-GNVTTKNITGLRANTIYFASVRAYNTAGTGPSSPPVNVTT 898
Score = 119 bits (299), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 164/660 (24%), Positives = 258/660 (39%), Gaps = 87/660 (13%)
Query: 88 SLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVE---------------- 131
+L I VE SD G+YTC V+N EA SV P V+
Sbjct: 180 NLYIAKVEPSDVGNYTCFVTNK--EAHR-----SVQGPPTPLVQRTDGVMGEYEPKIEVR 232
Query: 132 -PEFINAAEEETVTFECKASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRK 189
PE I AA++ +V EC A G P P+I W +G P+ P + + I ++
Sbjct: 233 FPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPM---PGKVKYSNSQATLEIPKFQQ 289
Query: 190 SDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPE 249
D G Y C A N G + + PE + ++ Y ++ C+ G P P
Sbjct: 290 EDEGFYECVAGNLRGRNLAKGQL-IFYAPPEWEQKIQNTYLSIYDSLFWECKASGNPNPS 348
Query: 250 VNWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT- 308
W+ N + L E G L IT + +DSG Y C A NK T + L V
Sbjct: 349 YTWLKNGERLNTEERIQTENGTLIITMLNVSDSGIYQCAAENKYQTIYANAELRVLASAP 408
Query: 309 HITDQP--EDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSL 366
+ P + V+ G + C + P K SI W RG+E + + R D SL
Sbjct: 409 DFSKNPIKKISVVQVGGDISIECKPNAFP--KASISWKRGTE--NLKQSKRVFFLEDGSL 464
Query: 367 TVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV------ 420
+ + D+G YTC A + ++ +L V+ T+I V +K V
Sbjct: 465 KICNVTRSDAGSYTCVATNQFGNGKSSGSLIVK-------ERTVITVPPSKMDVTVGESI 517
Query: 421 -----VSWNPVSPQSLRGHFRGYKVQ-----TWTEKDGEGSIRELIVNKGESTTTEVDKF 470
VS +P +F G + E+ G S+ +L++ + K+
Sbjct: 518 VLPCQVSHDPTMEVLFVWYFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQ--LGHSGKY 575
Query: 471 VPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQP 530
+ + L+ ++ + G PG + ++ + S+ L W
Sbjct: 576 LCTVQTTLERLS-----------AVADIIVRGPPGPPEDVKVEHISSTTSQLSWRPGPDN 624
Query: 531 NGVLMGYKIKYQSVKGTKVG-PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAG 589
N + + I Q+ VG + +P I + T +A + GL P +Y + G
Sbjct: 625 NSPIQIFTI--QTRTPFSVGWQAVATVPEILNGQTYNATVIGLSPWVEYEFRVVAGNNIG 682
Query: 590 DGAESK------YLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRR 643
G SK +P P N+ G G + + LVI+W +PE N F Y I +R
Sbjct: 683 IGEPSKPSELLRTKASIPNVAPVNINGGGGSRSELVITWEPIPEELQNGEGFGYIIMFRP 742
Query: 644 HNTGEAWNQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIREL-IVNKGE 700
+ W ++ V S+ + N+ P+E+KV +GEGS+ + IV GE
Sbjct: 743 VGS-TTWMKEKVALVESSKFIYRNESIMPLSPFEVKV--GVYNNEGEGSLSTVSIVYSGE 799
Score = 90.1 bits (222), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 147/638 (23%), Positives = 247/638 (38%), Gaps = 79/638 (12%)
Query: 55 CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
C G P P W K+G +N +RI N +LII + SD G Y C N +
Sbjct: 339 CKASGNPNPSYTWLKNGERLNTEERIQTEN--GTLIITMLNVSDSGIYQCAAENKY-QTI 395
Query: 115 SYSIDLSVLA-APYFTVEP-EFINAAE-EETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
+ +L VLA AP F+ P + I+ + ++ ECK + P+ I W + + Q+
Sbjct: 396 YANAELRVLASAPDFSKNPIKKISVVQVGGDISIECKPNAFPKASISWKRGTENLKQSKR 455
Query: 172 NPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV 231
+ G +I N+ +SD G+Y C ATN G K ++ IT P
Sbjct: 456 VFFLEDGSLKIC--NVTRSDAGSYTCVATNQFGN-GKSSGSLIVKERTVITVPPSKMDVT 512
Query: 232 DGKTVVLTCRVFGAPKPEV--NWIHN-----------QKELTGGRYTILETGDLKITDVA 278
G+++VL C+V P EV W N E GG GDL I ++
Sbjct: 513 VGESIVLPCQVSHDPTMEVLFVWYFNGDVIDLKKGVAHFERIGGE----SVGDLMIRNIQ 568
Query: 279 FADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT----FRCNAVSD 334
SG+Y C + L + V+ PED +VE S T +R ++
Sbjct: 569 LGHSGKYLCTVQTTLERLSAVADIIVRGPP---GPPEDVKVEHISSTTSQLSWRPGPDNN 625
Query: 335 PSLKLSIVWLRGSEPIDFE---SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
+++ + R + ++ + P + Y+ TV S ++ A + E
Sbjct: 626 SPIQIFTIQTRTPFSVGWQAVATVPEILNGQTYNATVIGLSPWVEYEFRVVAGNNIGIGE 685
Query: 392 AQA-----TLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQ----- 441
+P AP N + V++W P+ + G GY +
Sbjct: 686 PSKPSELLRTKASIPNVAPVNINGGGG-SRSELVITWEPIPEELQNGEGFGYIIMFRPVG 744
Query: 442 --TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVT 499
TW ++ + + ES +P S +V +N G S + +
Sbjct: 745 STTWMKEKVALVESSKFIYRNES-------IMPLSPFEVKVGVYNNEGEGSLSTVSIVYS 797
Query: 500 PEGVP------GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKY--QSVKGTKVGP 551
E P +VQS A + S + W + G ++GY++ Y + K + +G
Sbjct: 798 GEDEPRLAPRGTSVQSFSASDMEVSWNAIAW---NRNTGRVLGYEVLYWTDNSKESMIGK 854
Query: 552 LLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYV-----PFKNPD 606
+ +S TT + GL +T Y + Y AG G S + P + P
Sbjct: 855 I-----RVSGNVTTK-NITGLRANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPA 908
Query: 607 NVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRH 644
N+ + S + L ++W + +E+ + Y+I +R++
Sbjct: 909 NIAWKLSN-SKLCLNWEHVKTMENESEVLGYKILYRQN 945
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 137/378 (36%), Gaps = 40/378 (10%)
Query: 46 LRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFS-DQGSYTC 104
L ++ L C G P P W ++G I+ S G SL I D G Y C
Sbjct: 41 LSRSEIILSCTASGYPSPHYRWKQNGTDIDFSMTYHYRLDGGSLAISSPRTDQDIGIYQC 100
Query: 105 EVSNGVGEAKSYSIDLSVLAAPYF-TVEPEFINAAEEETVTFECKASGLP----EPEIHW 159
+N VG S L F T ++ E + V C G P E W
Sbjct: 101 LATNPVGTILSRKAKLQFAYIEDFETKSRSTVSVREGQGVVLLC---GPPPHFGELSYDW 157
Query: 160 VHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGY------------ 205
N P+ + RR V N + I + SD GNY C TN +
Sbjct: 158 TFNDNPL-YVQEDKRRFVSQNTGNLYIAKVEPSDVGNYTCFVTNKEAHRSVQGPPTPLVQ 216
Query: 206 ----VYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTG 261
V + + PE +A KD +V L C G P P+++W
Sbjct: 217 RTDGVMGEYEPKIEVRFPETIQAAKD------SSVKLECFALGNPVPDISWRRLDGSPMP 270
Query: 262 GRYTILET-GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVE 320
G+ + L+I D G Y C A N G G L + ++ +
Sbjct: 271 GKVKYSNSQATLEIPKFQQEDEGFYECVAGNLRGRNLAKGQLIFYAPPEWEQKIQNTYLS 330
Query: 321 AGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYT 380
S + C A +P+ S WL+ E ++ E +Q+ + +L +T + DSG Y
Sbjct: 331 IYDSLFWECKASGNPN--PSYTWLKNGERLNTEER---IQTENGTLIITMLNVSDSGIYQ 385
Query: 381 CRAQTELDFIEAQATLTV 398
C A+ + I A A L V
Sbjct: 386 CAAENKYQTIYANAELRV 403
Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 106/289 (36%), Gaps = 36/289 (12%)
Query: 121 SVLAAPYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKV 177
S P F EP+ F + C ASG P P W NG I + R
Sbjct: 21 SRFTRPIFIQEPQDVIFPLDLSRSEIILSCTASGYPSPHYRWKQNGTDIDFSMTYHYRLD 80
Query: 178 GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTV 236
G + D G Y C ATN +G + A+ + + +V +G+ V
Sbjct: 81 GGSLAISSPRTDQDIGIYQCLATNPVGTILSRKAKLQFAYIEDFETKSRSTVSVREGQGV 140
Query: 237 VLTCRVFGAPKPEV-----NWIHNQKEL----TGGRYTILETGDLKITDVAFADSGEYTC 287
VL C P P +W N L R+ TG+L I V +D G YTC
Sbjct: 141 VLLC----GPPPHFGELSYDWTFNDNPLYVQEDKRRFVSQNTGNLYIAKVEPSDVGNYTC 196
Query: 288 FARNKLG--TAQGSGSLTVKEHTHITDQ---------PEDYEVEAGQSATFRCNAVSDPS 336
F NK + QG + V+ + + PE + S C A+ +P
Sbjct: 197 FVTNKEAHRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPV 256
Query: 337 LKLSIVWLRGSEPIDFESEPRFVQ--SNDYSLTVTKSSELDSGQYTCRA 383
+S W R +D P V+ ++ +L + K + D G Y C A
Sbjct: 257 PDIS--WRR----LDGSPMPGKVKYSNSQATLEIPKFQQEDEGFYECVA 299
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 14/190 (7%)
Query: 409 TLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVD 468
T +Q A VSWN ++ G GY+V WT+ E I ++ V+ G TT +
Sbjct: 809 TSVQSFSASDMEVSWNAIAWNRNTGRVLGYEVLYWTDNSKESMIGKIRVS-GNVTTKNIT 867
Query: 469 KFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKW--VK 526
+ FA V A+N A GP S ++ T + P + A L +S L W VK
Sbjct: 868 GLRANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLSNSKLCLNWEHVK 927
Query: 527 PEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP-STKYRIHLAGY 585
+ ++GYKI Y+ + +K ++ + TSA+L L P Y I +
Sbjct: 928 TMENESEVLGYKILYRQNRQSKT--------HVLETNNTSAEL--LVPFEEDYLIEIRTV 977
Query: 586 TKAGDGAESK 595
+ GDG+ S+
Sbjct: 978 SDGGDGSSSE 987
>sp|Q63198|CNTN1_RAT Contactin-1 OS=Rattus norvegicus GN=Cntn1 PE=1 SV=2
Length = 1021
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 157/581 (27%), Positives = 245/581 (42%), Gaps = 42/581 (7%)
Query: 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
P V K + + V L C G P+P W K P+ + IS G L I
Sbjct: 241 PADIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEPMPTTAEISTS--GAVLKIF 298
Query: 93 HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
+++ D+G Y CE N G+ K + + V A P + E IN E + + + C A
Sbjct: 299 NIQLEDEGLYECEAENIRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCVA 354
Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
+G P P I W+ NG + ++ +T EN G Y C A N+ G +Y +
Sbjct: 355 TGKPIPTIRWLKNGYAYHKG------ELRLYDVTFEN-----AGMYQCIAENAYGTIYAN 403
Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
+ +LA AP E+ K G V++ C+ APKP+ +W + L R I
Sbjct: 404 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 463
Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
E G L+I ++ D G YTCFA N G A +G+L + T I P + ++ G++AT
Sbjct: 464 WEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITNPTRIILAPINADITVGENAT 523
Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-------PRFVQSNDYSLTVTKSSELDSGQY 379
+C A DPSL L+ VW IDF E F+ + L + + +G+Y
Sbjct: 524 MQCAASFDPSLDLTFVWSFNGYVIDFNKEITNIHYQRNFMLDANGELLIRNAQLKHAGRY 583
Query: 380 TCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYK 439
TC AQT +D A A L V+ P P I+ I A ++W+ S Y
Sbjct: 584 TCTAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYT 640
Query: 440 VQTWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
+QT T D + + + + +G + + +P + RV+A N G PS +
Sbjct: 641 IQTKTILSDDWKDAKTDPPIIEGNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSNR 700
Query: 498 VTPEGVPGTVQSLEAIPLGSS--AFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
+ +G V + G + + W + E G GY + ++ G + +
Sbjct: 701 IKTDGAAPNVAPSDVGGGGGTNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT 760
Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
P D K + PST +++ + + GDG S
Sbjct: 761 VTNP---DTGRYVHKDETMTPSTAFQVKVKAFNNKGDGPYS 798
Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 150/646 (23%), Positives = 243/646 (37%), Gaps = 61/646 (9%)
Query: 80 ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
+SQ N +L I +VE SD+G+Y+C VS+ +S + ++ P T +P
Sbjct: 189 VSQTN--GNLYIANVESSDRGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVV 246
Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
+F I + VT EC A G P P+I W +P+ P + I N++
Sbjct: 247 QFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEPM---PTTAEISTSGAVLKIFNIQLE 303
Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
D G Y C A N G + V A PE E D G + C G P P +
Sbjct: 304 DEGLYECEAENIRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCVATGKPIPTI 362
Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
W+ N G Y G+L++ DV F ++G Y C A N GT + L +
Sbjct: 363 RWLKN-----GYAY---HKGELRLYDVTFENAGMYQCIAENAYGTIYANAELKILALAPT 414
Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
+ P ++ A G C + P K S W +G+E + S R + D SL
Sbjct: 415 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 470
Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
+ + D G YTC A+ + TL + P + AP N + +A + S+
Sbjct: 471 INNITRNDGGIYTCFAENNRGKANSTGTLVITNPTRIILAPINADITVGENATMQCAASF 530
Query: 424 NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAF 483
+P + F GY + E R +++ + A +
Sbjct: 531 DPSLDLTFVWSFNGYVIDFNKEITNIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTI 590
Query: 484 NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQS 543
+ ++ ++ + A ++ L W + + + Y I+ ++
Sbjct: 591 VDNSSASADLVVRGPPGPPGGLRIEDIRA-----TSVALTWSRGSDNHSPISKYTIQTKT 645
Query: 544 V-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES---- 594
+ K K P P I + SAK L P +Y + G G S
Sbjct: 646 ILSDDWKDAKTDP-----PII-EGNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSN 699
Query: 595 --KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
K P P +V G G T L I+W + H +F Y + ++ + GE W +
Sbjct: 700 RIKTDGAAPNVAPSDVGGGGGTNRELTITWAPLSREYHYGNNFGYIVAFKPFD-GEEWKK 758
Query: 653 DDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
V + V ++ T P +++KV + DG S+ +I
Sbjct: 759 VTVTNPDTGRYVHKDE-TMTPSTAFQVKVKAFNNKGDGPYSLIAVI 803
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 142/374 (37%), Gaps = 50/374 (13%)
Query: 50 KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
KV L C +P P W + ++ +DR S G +L+I + + D G Y C S
Sbjct: 60 KVSLNCRARASPFPVYKWRMNNGDVDLTNDRYSM--VGGNLVINNPDKQKDAGIYYCLAS 117
Query: 108 NGVGEAKSYSIDLSVLAAPYFTVE--PEFINAAEEETVTFECKASGLPEPEIH------- 158
N G +S LS F E PE + E + + C +P H
Sbjct: 118 NNYGMVRSTEATLSFGYLDPFPPEDRPE-VKVKEGKGMVLLC------DPPYHFPDDLSY 170
Query: 159 -WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV- 214
W+ N P+ + RR V + I N+ SD GNY C ++ + K V+
Sbjct: 171 RWLLNEFPVFIT-MDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSP--SITKSVFSKFI 227
Query: 215 -LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRY 264
L PE T P KD YT+ G+ V L C G P P++ W + +
Sbjct: 228 PLIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEPMPTTAE 287
Query: 265 TILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS 324
LKI ++ D G Y C A N G + + V+ + D EV+ G
Sbjct: 288 ISTSGAVLKIFNIQLEDEGLYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSD 347
Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQ 384
+ C A P +I WL+ + E R Y +T ++G Y C A+
Sbjct: 348 LYWPCVATGKPI--PTIRWLKNGYAY-HKGELRL-----YDVTFE-----NAGMYQCIAE 394
Query: 385 TELDFIEAQATLTV 398
I A A L +
Sbjct: 395 NAYGTIYANAELKI 408
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 111/292 (38%), Gaps = 28/292 (9%)
Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPR-RKVGPNRITI 184
P T+ PE + E V+ C+A P P W N + N R VG N +
Sbjct: 47 PINTIYPE---ESLEGKVSLNCRARASPFPVYKWRMNNGDVDLT--NDRYSMVGGNLVIN 101
Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV- 242
++ D G Y C A+N+ G V + + E V +GK +VL C
Sbjct: 102 NPDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEDRPEVKVKEGKGMVLLCDPP 161
Query: 243 FGAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQ 297
+ P W+ N+ + R+ G+L I +V +D G Y+CF + T
Sbjct: 162 YHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSPSITKS 221
Query: 298 GSGSLT----VKEHT------HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS 347
+ E T I Q +D GQ+ T C A+ +P I W +
Sbjct: 222 VFSKFIPLIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNPV--PDIRWRKVL 279
Query: 348 EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
EP+ +E + ++ L + D G Y C A+ + QA + VQ
Sbjct: 280 EPMPTTAE---ISTSGAVLKIFNIQLEDEGLYECEAENIRGKDKHQARIYVQ 328
Score = 40.8 bits (94), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 8/144 (5%)
Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
P EAP+ ++V+ + + V W V L Y+++ W D E + + V
Sbjct: 810 PSEAPTEVG-VKVLSSSEISVHWKHV----LEKIVESYQIRYWAGHDKEAAAHRVQVTSQ 864
Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
E + ++ +P ++ F V A N A GP S++I T + P + + S +
Sbjct: 865 E-YSARLENLLPDTQYFIEVGACNSAGCGPSSDVIETFTRKAPPSQPPRIISSVRSGSRY 923
Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
+ W V + GYKI Y+
Sbjct: 924 IITWDHVVALSNESTVTGYKILYR 947
>sp|Q02246|CNTN2_HUMAN Contactin-2 OS=Homo sapiens GN=CNTN2 PE=1 SV=1
Length = 1040
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 165/623 (26%), Positives = 266/623 (42%), Gaps = 45/623 (7%)
Query: 45 ALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
AL ++V L C G P+P+ W K ++P ++ +L I V F D+G+Y C
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWTTAE----PTLQIPSVSFEDEGTYEC 306
Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
E N G + + V A P + A + + C A+G P P + W+ NG+
Sbjct: 307 EAENSKGR-DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGE 365
Query: 165 PISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
P++ R +V + L D+G Y C A N G +Y + V A AP+
Sbjct: 366 PLAS---QNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLN 422
Query: 225 PKDEY--TVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
P G +++ C+ APK V W + L R T+ G L I +++ +D
Sbjct: 423 PVRRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSD 482
Query: 282 SGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
G+YTCFA N +G A +G L+V++ T IT P ++ G + T +C+A DP++ L+
Sbjct: 483 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTF 542
Query: 342 VWLRGSEPIDFESEPRFVQSNDY-----SLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
W PIDF+ + + LT+ + G+YTC AQT +D +AT+
Sbjct: 543 TWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATV 602
Query: 397 TVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGH--FRGYKVQTWTEKDGE-GSIR 453
V+ P P + + D +SW+ + H Y +Q T G+ +R
Sbjct: 603 LVRGPPGPPGGVVVRDIGDTTIQ-LSWS----RGFDNHSPIAKYTLQARTPPAGKWKQVR 657
Query: 454 ELIVN-KGESTTTEVDKFVPASKNFARVLAFN----GAYNGPPSEIISFVTPEGVPGTVQ 508
N +G + T +V P RV+A N G +GP S+I T E P
Sbjct: 658 TNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKI---RTREAAPSVAP 714
Query: 509 SLEAIPLGSSA-FYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTT 565
S + G+ + W + E NG GY + ++ T R+P +D
Sbjct: 715 SGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQ--TARVPG-ADAQYF 771
Query: 566 SAKLAGLEPSTKYRIHLAGYTKAGDGAES-KYLFYV----PFKNPDNVEGRGSTPNNLVI 620
+ P T + + + Y + GDG ES L Y P P V +G + + + +
Sbjct: 772 VYSNESVRPYTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNV 831
Query: 621 SWTAMPEIEHNAPHFKYRI-FWR 642
+W + + + N Y I +W+
Sbjct: 832 TWEPVQQ-DMNGILLGYEIRYWK 853
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 151/369 (40%), Gaps = 26/369 (7%)
Query: 49 KKVELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEV 106
++V L C +P W +G + + P R Q G +I+ + D G Y C
Sbjct: 55 EQVLLACRARASPPATYRWKMNGTEMKLEPGSR-HQLVGGNLVIMNPTKAQDAGVYQCLA 113
Query: 107 SNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK-ASGLPEPEIHWVHNGK 164
SN VG S L F+ E + + A E V C + P W+ N
Sbjct: 114 SNPVGTVVSREAILRFGFLQEFSKEERDPVKAHEGWGVMLPCNPPAHYPGLSYRWLLNEF 173
Query: 165 PISQAPPNPRRKVG--PNRITIENLRKSDTGNYGCNATNSLGYVYKDVY-----VNVLAH 217
P + P + R V + I SD GNY C AT+ + + K V+ +N+ A
Sbjct: 174 P-NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAE 232
Query: 218 -----APEI-TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYTILETGD 271
AP I P + Y + G+ V L C FG P P + W L+ ++T E
Sbjct: 233 DTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-PQWTTAEP-T 290
Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
L+I V+F D G Y C A N G G + V+ D E + G + + C A
Sbjct: 291 LQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAA 350
Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
P + ++ WLR EP+ ++ + + L +K S DSG Y C A+ + I
Sbjct: 351 AGKP--RPTVRWLRNGEPLASQNRVEVLAGD---LRFSKLSLEDSGMYQCVAENKHGTIY 405
Query: 392 AQATLTVQV 400
A A L VQ
Sbjct: 406 ASAELAVQA 414
Score = 92.8 bits (229), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 147/652 (22%), Positives = 235/652 (36%), Gaps = 71/652 (10%)
Query: 88 SLIIKHVEFSDQGSYTC------EVSNGVGEAKSYSIDLSV----LAAPYFTVE-PEFIN 136
+L I SD G+Y+C + S +K ++L+ L AP P
Sbjct: 191 NLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDTRLFAPSIKARFPAETY 250
Query: 137 AAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYG 196
A + VT EC A G P P I W +S P+ + I ++ D G Y
Sbjct: 251 ALVGQQVTLECFAFGNPVPRIKWRKVDGSLS-----PQWTTAEPTLQIPSVSFEDEGTYE 305
Query: 197 CNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQ 256
C A NS G + V A PE + D G + C G P+P V W+ N
Sbjct: 306 CEAENSKGRDTVQGRIIVQAQ-PEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNG 364
Query: 257 KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHT-HITDQPE 315
+ L + GDL+ + ++ DSG Y C A NK GT S L V+ P
Sbjct: 365 EPLASQNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPV 424
Query: 316 DYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELD 375
+ A + + K ++W +G+E + S R + D +L + S D
Sbjct: 425 RRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSS--RVTVTPDGTLIIRNISRSD 482
Query: 376 SGQYTCRAQTELDFIEAQATLTVQVPLE---APS--------NFTLIQVIDAKKAVV--- 421
G+YTC A+ + + L+V+ + APS N TL Q + +
Sbjct: 483 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTL-QCHASHDPTMDLT 541
Query: 422 -SWN----PVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKN 476
+W P+ GH+R V+ E G+ +I + G T V ++
Sbjct: 542 FTWTLDDFPIDFDKPGGHYRRTNVK---ETIGDLTILNAQLRHGGKYTCMAQTVVDSASK 598
Query: 477 FARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMG 536
A VL + +G + L W + + +
Sbjct: 599 EATVLVRGPPG------------------PPGGVVVRDIGDTTIQLSWSRGFDNHSPIAK 640
Query: 537 YKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES-- 594
Y ++ ++ K + P + +A++ GL P Y + G G S
Sbjct: 641 YTLQARTPPAGKWKQVRTN-PANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGP 699
Query: 595 ----KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAW 650
+ P P + G G P L+++WT M N F Y + +RR + W
Sbjct: 700 SSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTH-W 758
Query: 651 NQDDVLDWRQSELVLANQPT--FQPYEIKVVQTWTEKDGEGSIRELIVNKGE 700
V V +N+ + P+E+K+ DG S+ L+ + E
Sbjct: 759 QTARVPGADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTALVYSAEE 810
Score = 90.5 bits (223), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 142/614 (23%), Positives = 227/614 (36%), Gaps = 84/614 (13%)
Query: 55 CIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAK 114
C G P P W ++G P+ +R+ L + D G Y C N G
Sbjct: 348 CAAAGKPRPTVRWLRNGEPLASQNRVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTIY 405
Query: 115 SYSIDLSVLA-APYFTVEP--EFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPP 171
+ S +L+V A AP F + P I AA + C+ P+ + W + + +
Sbjct: 406 A-SAELAVQALAPDFRLNPVRRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSS- 463
Query: 172 NPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYT 230
R V P+ + I N+ +SD G Y C A N +G ++V A +IT AP
Sbjct: 464 --RVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSV-RDATKITLAPSSADI 520
Query: 231 VDGKTVVLTCRVFGAPKPEVNWIHNQKELT------GGRY---TILET-GDLKITDVAFA 280
G + L C P ++ + + GG Y + ET GDL I +
Sbjct: 521 NLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLR 580
Query: 281 DSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQS---------------- 324
G+YTC A+ + +A S TV + G +
Sbjct: 581 HGGKYTCMAQTVVDSA--SKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPI 638
Query: 325 ATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQS------NDYSLTVTKSSELDSGQ 378
A + A + P+ K V + P + E Q DY V S+ L +G+
Sbjct: 639 AKYTLQARTPPAGKWKQV---RTNPANIEGNAETAQVLGLTPWMDYEFRVIASNILGTGE 695
Query: 379 YTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGY 438
+ +++ EA ++ + +V+W P+S + G GY
Sbjct: 696 PSG-PSSKIRTREAAPSVAPSG--------LSGGGGAPGELIVNWTPMSREYQNGDGFGY 746
Query: 439 KVQ-------TWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPP 491
+ W G+ + V ES V + P ++ ++N +GP
Sbjct: 747 LLSFRRQGSTHWQTARVPGADAQYFVYSNES----VRPYTPFE---VKIRSYNRRGDGPE 799
Query: 492 SEIISFVTPEGVPGTVQS-LEAIPLGSSAFYLKWVKPEQP-NGVLMGYKIKYQSVKGTKV 549
S + E P + + A + SS + W +Q NG+L+GY+I+Y +
Sbjct: 800 SLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGILLGYEIRYWKAGDKEA 859
Query: 550 GPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESKYLFYVPFKNPDNVE 609
R + TSA+++GL P+TKY + + Y +AG G S K P
Sbjct: 860 AADRVRTAGLD----TSARVSGLHPNTKYHVTVRAYNRAGTGPASPSANATTMKPPPR-- 913
Query: 610 GRGSTPNNLVISWT 623
P N ISWT
Sbjct: 914 ---RPPGN--ISWT 922
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 113/300 (37%), Gaps = 34/300 (11%)
Query: 125 APYFTVEPE---FINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNR 181
P F +P F + EE V C+A P W NG + P + + VG N
Sbjct: 36 GPVFEDQPLSVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNL 95
Query: 182 ITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTC 240
+ + + D G Y C A+N +G V + E ++ +D +G V+L C
Sbjct: 96 VIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKAHEGWGVMLPC 155
Query: 241 RVFGA-PKPEVNWIHNQKE---LTGGRYTILE-TGDLKITDVAFADSGEYTCFARNKLGT 295
P W+ N+ T GR+ + + TG+L I +D G Y+C A + +
Sbjct: 156 NPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDF 215
Query: 296 AQGSGSLTVKEHTHITDQPEDYEVEA---------------GQSATFRCNAVSDPSLKLS 340
+ S + + ED + A GQ T C A +P +
Sbjct: 216 STKS---VFSKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPR-- 270
Query: 341 IVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV 400
I W + +D P++ + + +L + S D G Y C A+ Q + VQ
Sbjct: 271 IKWRK----VDGSLSPQWTTA-EPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQA 325
>sp|P12960|CNTN1_MOUSE Contactin-1 OS=Mus musculus GN=Cntn1 PE=1 SV=1
Length = 1020
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 156/581 (26%), Positives = 245/581 (42%), Gaps = 42/581 (7%)
Query: 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
P V K + + V L C G P+P W K P+ + IS G L I
Sbjct: 241 PADIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS--GAVLKIF 298
Query: 93 HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEET---VTFECKA 149
+++ D+G Y CE N G+ K + + V A P + E IN E + + + C A
Sbjct: 299 NIQLEDEGLYECEAENIRGKDK-HQARIYVQAFPEWV---EHINDTEVDIGSDLYWPCIA 354
Query: 150 SGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKD 209
+G P P I W+ NG + ++ +T EN G Y C A N+ G +Y +
Sbjct: 355 TGKPIPTIRWLKNGYSYHKG------ELRLYDVTFEN-----AGMYQCIAENAYGSIYAN 403
Query: 210 VYVNVLAHAP--EITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTI 266
+ +LA AP E+ K G V++ C+ APKP+ +W + L R I
Sbjct: 404 AELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILI 463
Query: 267 LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSAT 326
E G L+I ++ D G YTCFA N G A +G+L + T I P + ++ G++AT
Sbjct: 464 WEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITNPTRIILAPINADITVGENAT 523
Query: 327 FRCNAVSDPSLKLSIVWLRGSEPIDFESE-------PRFVQSNDYSLTVTKSSELDSGQY 379
+C A DP+L L+ VW IDF E F+ + L + + +G+Y
Sbjct: 524 MQCAASFDPALDLTFVWSFNGYVIDFNKEITHIHYQRNFMLDANGELLIRNAQLKHAGRY 583
Query: 380 TCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYK 439
TC AQT +D A A L V+ P P I+ I A ++W+ S Y
Sbjct: 584 TCTAQTIVDNSSASADLVVRGPPGPPGGLR-IEDIRATSVALTWSRGSDN--HSPISKYT 640
Query: 440 VQTWT--EKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISF 497
+QT T D + + + + +G + + +P + RV+A N G PS +
Sbjct: 641 IQTKTILSDDWKDAKTDPPIIEGNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSNR 700
Query: 498 VTPEGVPGTVQSLEAIPLGSS--AFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLL 553
+ +G V + G + + W + E G GY + ++ G + +
Sbjct: 701 IKTDGAAPNVAPSDVGGGGGTNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT 760
Query: 554 ERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES 594
P D K + PST +++ + + GDG S
Sbjct: 761 VTNP---DTGRYVHKDETMTPSTAFQVKVKAFNNKGDGPYS 798
Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 149/646 (23%), Positives = 243/646 (37%), Gaps = 61/646 (9%)
Query: 80 ISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP------- 132
+SQ N +L I +VE SD+G+Y+C VS+ +S + ++ P T +P
Sbjct: 189 VSQTN--GNLYIANVESSDRGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVV 246
Query: 133 EF--INAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKS 190
+F I + VT EC A G P P+I W +P+ P + I N++
Sbjct: 247 QFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEPM---PSTAEISTSGAVLKIFNIQLE 303
Query: 191 DTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTVDGKTVVLTCRVFGAPKPEV 250
D G Y C A N G + V A PE E D G + C G P P +
Sbjct: 304 DEGLYECEAENIRGKDKHQARIYVQAF-PEWVEHINDTEVDIGSDLYWPCIATGKPIPTI 362
Query: 251 NWIHNQKELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHI 310
W+ N G Y G+L++ DV F ++G Y C A N G+ + L +
Sbjct: 363 RWLKN-----GYSY---HKGELRLYDVTFENAGMYQCIAENAYGSIYANAELKILALAPT 414
Query: 311 TDQ-PEDYEVEA--GQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLT 367
+ P ++ A G C + P K S W +G+E + S R + D SL
Sbjct: 415 FEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS--WSKGTEWLVNSS--RILIWEDGSLE 470
Query: 368 VTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP---LEAPSNFTLIQVIDA-KKAVVSW 423
+ + D G YTC A+ + TL + P + AP N + +A + S+
Sbjct: 471 INNITRNDGGIYTCFAENNRGKANSTGTLVITNPTRIILAPINADITVGENATMQCAASF 530
Query: 424 NPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAF 483
+P + F GY + E R +++ + A +
Sbjct: 531 DPALDLTFVWSFNGYVIDFNKEITHIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTI 590
Query: 484 NGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQS 543
+ ++ ++ + A ++ L W + + + Y I+ ++
Sbjct: 591 VDNSSASADLVVRGPPGPPGGLRIEDIRA-----TSVALTWSRGSDNHSPISKYTIQTKT 645
Query: 544 V-----KGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAES---- 594
+ K K P P I + SAK L P +Y + G G S
Sbjct: 646 ILSDDWKDAKTDP-----PII-EGNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSN 699
Query: 595 --KYLFYVPFKNPDNVEGRGSTPNNLVISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQ 652
K P P +V G G T L I+W + H +F Y + ++ + GE W +
Sbjct: 700 RIKTDGAAPNVAPSDVGGGGGTNRELTITWAPLSREYHYGNNFGYIVAFKPFD-GEEWKK 758
Query: 653 DDVLDWRQSELVLANQPTFQP---YEIKVVQTWTEKDGEGSIRELI 695
V + V ++ T P +++KV + DG S+ +I
Sbjct: 759 VTVTNPDTGRYVHKDE-TMTPSTAFQVKVKAFNNKGDGPYSLVAVI 803
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 141/373 (37%), Gaps = 48/373 (12%)
Query: 50 KVELFCIFGGTPLPQTIWSKDGVPIN-PSDRISQGNYGKSLIIKHVEFS-DQGSYTCEVS 107
KV L C +P P W + ++ +DR S G +L+I + + D G Y C S
Sbjct: 60 KVSLNCRARASPFPVYKWRMNNGDVDLTNDRYSM--VGGNLVINNPDKQKDAGVYYCLAS 117
Query: 108 NGVGEAKSYSIDLSV-LAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIH-------- 158
N G +S LS P+ E + E + + C +P H
Sbjct: 118 NNYGMVRSTEATLSFGYLDPFPPEERPEVKVKEGKGMVLLC------DPPYHFPDDLSYR 171
Query: 159 WVHNGKPISQAPPNPRRKVGPN--RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNV-- 214
W+ N P+ + RR V + I N+ SD GNY C ++ + K V+
Sbjct: 172 WLLNEFPVFIT-MDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSP--SITKSVFSKFIP 228
Query: 215 LAHAPEITEAP---------KDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELTGGRYT 265
L PE T P KD YT+ G+ V L C G P P++ W + +
Sbjct: 229 LIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI 288
Query: 266 ILETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSA 325
LKI ++ D G Y C A N G + + V+ + D EV+ G
Sbjct: 289 STSGAVLKIFNIQLEDEGLYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDL 348
Query: 326 TFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
+ C A P +I WL+ + E R Y +T ++G Y C A+
Sbjct: 349 YWPCIATGKPI--PTIRWLKNGYSY-HKGELRL-----YDVTFE-----NAGMYQCIAEN 395
Query: 386 ELDFIEAQATLTV 398
I A A L +
Sbjct: 396 AYGSIYANAELKI 408
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 111/292 (38%), Gaps = 28/292 (9%)
Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPR-RKVGPNRITI 184
P T+ PE + E V+ C+A P P W N + N R VG N +
Sbjct: 47 PINTIYPE---ESLEGKVSLNCRARASPFPVYKWRMNNGDVDLT--NDRYSMVGGNLVIN 101
Query: 185 ENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-DGKTVVLTCRV- 242
++ D G Y C A+N+ G V + + E V +GK +VL C
Sbjct: 102 NPDKQKDAGVYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVKVKEGKGMVLLCDPP 161
Query: 243 FGAPKP-EVNWIHNQ----KELTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQ 297
+ P W+ N+ + R+ G+L I +V +D G Y+CF + T
Sbjct: 162 YHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSPSITKS 221
Query: 298 GSGSLT----VKEHT------HITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGS 347
+ E T I Q +D GQ+ T C A+ +P I W +
Sbjct: 222 VFSKFIPLIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNPV--PDIRWRKVL 279
Query: 348 EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
EP+ +E + ++ L + D G Y C A+ + QA + VQ
Sbjct: 280 EPMPSTAE---ISTSGAVLKIFNIQLEDEGLYECEAENIRGKDKHQARIYVQ 328
Score = 40.8 bits (94), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 8/144 (5%)
Query: 401 PLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDGEGSIRELIVNKG 460
P EAP+ ++V+ + + V W V L Y+++ W D E + + V
Sbjct: 810 PSEAPTEVG-VKVLSSSEISVHWKHV----LEKIVESYQIRYWAGHDKEAAAHRVQVTSQ 864
Query: 461 ESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGTVQSLEAIPLGSSAF 520
E + ++ +P ++ F V A N A GP S++I T + P + + S +
Sbjct: 865 E-YSARLENLLPDTQYFIEVGACNSAGCGPSSDVIETFTRKAPPSQPPRIISSVRSGSRY 923
Query: 521 YLKW--VKPEQPNGVLMGYKIKYQ 542
+ W V + GYKI Y+
Sbjct: 924 IITWDHVVALSNESTVTGYKILYR 947
>sp|Q3UQ28|PXDN_MOUSE Peroxidasin homolog OS=Mus musculus GN=Pxdn PE=2 SV=2
Length = 1475
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 179/360 (49%), Gaps = 17/360 (4%)
Query: 51 VELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
V C G P P+ IW ++ + + R++ + G +L+I++ + +D+G Y C N
Sbjct: 260 VYFTCRAEGNPKPEIIWLRNNNELSMKTDSRLNLLDDG-TLMIQNTQEADEGVYQCMAKN 318
Query: 109 GVGEAKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
GEAK+ + L L A P F ++P+ E+VT EC A+G P P+I W +
Sbjct: 319 VAGEAKTQEVTLRYLGSPARPTFVIQPQNTEVLVGESVTLECSATGHPLPQITWTRGDR- 377
Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
+ P +PR + P+ + I+N+ +SD+G Y C A+NS+ ++ ++ V A P+ T
Sbjct: 378 -TPLPIDPRVNITPSGGLYIQNVAQSDSGEYTCFASNSVDSIHATAFIIVQA-LPQFTVT 435
Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSG 283
P+ ++G+TV C G P+P + W +L+ R+ +L +G L+I+ VA D G
Sbjct: 436 PQSRVVIEGQTVDFQCAAKGHPQPVIAWTKGGSQLSVDRRHLVLSSGTLRISGVALHDQG 495
Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
+Y C A N +G+ + LTV+ P D VE G + C++ +P + +I
Sbjct: 496 QYECQAVNIIGSQKVVAHLTVQPRVTPVFASIPSDMTVEVGTNVQLPCSSQGEP--EPAI 553
Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQVP 401
W + + +F S + LT+ D+G+Y C A+ + + L+V VP
Sbjct: 554 TW--NKDGVQVTESGKFHISPEGFLTINDVGTADAGRYECVARNTIGYASVSMVLSVNVP 611
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 121/264 (45%), Gaps = 11/264 (4%)
Query: 46 LRNKKVELFCIFGGTPLPQTIWSKDG---VPINPSDRISQGNYGKSLIIKHVEFSDQGSY 102
L + V L C G PLPQ W++ +PI+P I+ L I++V SD G Y
Sbjct: 351 LVGESVTLECSATGHPLPQITWTRGDRTPLPIDPRVNITPSG---GLYIQNVAQSDSGEY 407
Query: 103 TCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHN 162
TC SN V + + + V A P FTV P+ E +TV F+C A G P+P I W
Sbjct: 408 TCFASNSVDSIHATAF-IIVQALPQFTVTPQSRVVIEGQTVDFQCAAKGHPQPVIAWTKG 466
Query: 163 GKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA-PEI 221
G +S + G RI+ L D G Y C A N +G ++ V P
Sbjct: 467 GSQLSVDRRHLVLSSGTLRISGVALH--DQGQYECQAVNIIGSQKVVAHLTVQPRVTPVF 524
Query: 222 TEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFA 280
P D G V L C G P+P + W + ++T G++ I G L I DV A
Sbjct: 525 ASIPSDMTVEVGTNVQLPCSSQGEPEPAITWNKDGVQVTESGKFHISPEGFLTINDVGTA 584
Query: 281 DSGEYTCFARNKLGTAQGSGSLTV 304
D+G Y C ARN +G A S L+V
Sbjct: 585 DAGRYECVARNTIGYASVSMVLSV 608
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 137/308 (44%), Gaps = 11/308 (3%)
Query: 99 QGSYTCEVSNGVGEAKSYSIDLSVLAA--PYFTVEPEFINAAEEETVTFECKASGLPEPE 156
Q + TCE + +I L P T EP+ + TV F C+A G P+PE
Sbjct: 214 QAAATCEYPRRIQGRSVATITPEELNCERPRITSEPQDADVTSGNTVYFTCRAEGNPKPE 273
Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYV-YKDVYVNVL 215
I W+ N +S + + + I+N +++D G Y C A N G ++V + L
Sbjct: 274 IIWLRNNNELSMKTDSRLNLLDDGTLMIQNTQEADEGVYQCMAKNVAGEAKTQEVTLRYL 333
Query: 216 AH--APEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETGD 271
P P++ + G++V L C G P P++ W + R I +G
Sbjct: 334 GSPARPTFVIQPQNTEVLVGESVTLECSATGHPLPQITWTRGDRTPLPIDPRVNITPSGG 393
Query: 272 LKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNA 331
L I +VA +DSGEYTCFA N + + + + V+ T P+ V GQ+ F+C A
Sbjct: 394 LYIQNVAQSDSGEYTCFASNSVDSIHATAFIIVQALPQFTVTPQSRVVIEGQTVDFQCAA 453
Query: 332 VSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIE 391
P + I W +G + + + S +L ++ + D GQY C+A + +
Sbjct: 454 KGHP--QPVIAWTKGGSQLSVDRRHLVLSSG--TLRISGVALHDQGQYECQAVNIIGSQK 509
Query: 392 AQATLTVQ 399
A LTVQ
Sbjct: 510 VVAHLTVQ 517
>sp|P70232|CHL1_MOUSE Neural cell adhesion molecule L1-like protein OS=Mus musculus
GN=Chl1 PE=1 SV=2
Length = 1209
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 177/729 (24%), Positives = 296/729 (40%), Gaps = 74/729 (10%)
Query: 33 PKQQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIK 92
P Q + + L+ + L C G P P WSK G + P R + + K+L I+
Sbjct: 240 PPAQMGSLSAKTVLKGDTLLLECFAEGLPTPHIQWSKPGSEL-PEGRATIEVHEKTLKIE 298
Query: 93 HVEFSDQGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGL 152
++ + D+G+Y C +N +G+A S+ ++V P + +P+ + + C+A G
Sbjct: 299 NISYQDRGNYRCTANNLLGKA-SHDFHVTVEEPPRWKKKPQSAVYSTGSSGILLCEAEGE 357
Query: 153 PEPEIHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYV 212
P+P I W NG PI + P P + P I+ NL + TG Y C A+N G + + +
Sbjct: 358 PQPTIKWRLNGLPIEKHP-FPGDFMFPREISFTNLLPNHTGVYQCEASNIHGTILANANI 416
Query: 213 NVLAHAPEITEAPKDEY-TVDGKTVVLTCRVFGAPKPEVNW--IHNQKELTGGRYTILET 269
+V+ P I ++ Y TV G + L C F +PK V W L G RY E
Sbjct: 417 DVIDVIPLIKTKNEENYATVVGYSAFLHCEYFASPKATVVWEVADETHPLEGDRYHTHEN 476
Query: 270 GDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRC 329
G L+I D+G Y+C+ N +G A + +L ++ T + P++ + C
Sbjct: 477 GTLEIYRTTEEDAGSYSCWVDNAMGKAVITANLDIRNATKLRVSPKNPRIPKSHVLELYC 536
Query: 330 NAVSDPSLK--LSIVWLRGSEPIDFE--SEPRFVQSNDYSLTVTKSSELDSGQYTCRAQT 385
+ D LK L + W + E + + R V Y LT++ + D G Y+C AQT
Sbjct: 537 ESQCDSHLKHSLKLSWSKDGEAFEMNGTEDGRIVIDGAY-LTISNITAEDQGVYSCSAQT 595
Query: 386 ELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTE 445
LD + +TV + P N L + + + +SW + + Y V+
Sbjct: 596 SLDSTSEKTQVTVLGVPDPPGNLHLSERQN-RSVRLSWEAGDDHNSK--ISEYIVEFEGN 652
Query: 446 KDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFN---GAYNGPPSEIISFVTPEG 502
++ G EL +GE T V P + RV A N ++ PS+ TP
Sbjct: 653 REEPGKWEELTRVQGEETDV-VLSLAPYVRYQFRVTAVNEVGRSHASLPSD--HHETPPA 709
Query: 503 VPG-TVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 559
P Q++ +KW +K + NG + YK+ ++ +
Sbjct: 710 APDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYKVSWKPQGAPE---------EW 760
Query: 560 SDPTTTSAKLAGLEPST--KYRIHLAGYTKAGDGAESKYL-FYVPFKNPDN--VEGRGST 614
+ T+ L + P+ Y + + + G + + + Y P V R
Sbjct: 761 EEEIVTNHTLRVMTPTVYAPYDVKVQAINQLGSSPDPQPVTLYSGEDYPSTAPVIQRVDV 820
Query: 615 PNNLV--ISWTAMPEIEHNAPHFKYRIFWRRHNTGEAWNQDDVLDWRQSELVLANQPTFQ 672
N+ + ++W+++P+ + Y+I W W +LD R
Sbjct: 821 MNSTLVKVTWSSIPKETVHGLLRGYQINW--------WKTKSLLDGRT-----------H 861
Query: 673 PYEIKVVQTWTEKDGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSE 732
P E+ +++ G+ + V P S+ VLA+N GP SE
Sbjct: 862 PKEVNILRF----------------SGQRNSGMVPSLDPFSEFHLTVLAYNSKGAGPESE 905
Query: 733 IISFVTPEG 741
F TPEG
Sbjct: 906 PYIFQTPEG 914
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 140/583 (24%), Positives = 241/583 (41%), Gaps = 67/583 (11%)
Query: 53 LFCIFGGTPLPQTIW--SKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGV 110
L C + +P +W + + P+ DR G I + E D GSY+C V N +
Sbjct: 443 LHCEYFASPKATVVWEVADETHPLE-GDRYHTHENGTLEIYRTTE-EDAGSYSCWVDNAM 500
Query: 111 GEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKA---SGLPEP-EIHWVHNGKPI 166
G+A + +L + A V P+ + + C++ S L ++ W +G+
Sbjct: 501 GKA-VITANLDIRNATKLRVSPKNPRIPKSHVLELYCESQCDSHLKHSLKLSWSKDGEAF 559
Query: 167 SQ-APPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAP 225
+ R + +TI N+ D G Y C+A SL + V VL + + P
Sbjct: 560 EMNGTEDGRIVIDGAYLTISNITAEDQGVYSCSAQTSLDSTSEKTQVTVLG----VPDPP 615
Query: 226 KDEYTVD--GKTVVLTCRVFGAPKPEVNWIHNQK------ELTG-----GRYTILETGDL 272
+ + + ++V L+ E HN K E G G++ L
Sbjct: 616 GNLHLSERQNRSVRLSW--------EAGDDHNSKISEYIVEFEGNREEPGKWEELTRVQG 667
Query: 273 KITDVAFADSG----EYTCFARNKLGTAQGSGSLTVKEH----THITDQPEDYEVEAGQS 324
+ TDV + + ++ A N++G + S L H P++ V+A Q
Sbjct: 668 EETDVVLSLAPYVRYQFRVTAVNEVGRSHAS--LPSDHHETPPAAPDKNPQNIRVQASQP 725
Query: 325 AT-------FRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSG 377
+ + P L+ + W P ++E E + +N ++L V +
Sbjct: 726 KEMIIKWEPLKSMEQNGPGLEYKVSWKPQGAPEEWEEE---IVTN-HTLRVMTPTVYAPY 781
Query: 378 QYTCRAQTELDFIEAQATLTVQVPLEAPSNFTLIQVIDAKKAV---VSWNPVSPQSLRGH 434
+A +L +T+ + PS +IQ +D + V+W+ + +++ G
Sbjct: 782 DVKVQAINQLGSSPDPQPVTLYSGEDYPSTAPVIQRVDVMNSTLVKVTWSSIPKETVHGL 841
Query: 435 FRGYKVQTWTEK---DGEGSIRELIVNK--GESTTTEVDKFVPASKNFARVLAFNGAYNG 489
RGY++ W K DG +E+ + + G+ + V P S+ VLA+N G
Sbjct: 842 LRGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDPFSEFHLTVLAYNSKGAG 901
Query: 490 PPSEIISFVTPEGVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGT-K 548
P SE F TPEGVP L+ I + L W P++ NG L GY ++YQ + T +
Sbjct: 902 PESEPYIFQTPEGVPEQPSFLKVIKVDKDTATLSWGLPKKLNGNLTGYLLQYQIINDTYE 961
Query: 549 VGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 591
+G L E ++ P+ +S L+ L +TKY+ +L T G G
Sbjct: 962 LGELNEI--NVTTPSKSSWHLSNLNSTTKYKFYLRACTSRGCG 1002
Score = 92.8 bits (229), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 163/390 (41%), Gaps = 35/390 (8%)
Query: 34 KQQYVTRKKEVALR-NKKVELFCIFGGTPLPQTIWSKDGVPINPSDR--ISQGNYGKSLI 90
KQ YV +VA ++ ++ C G P P W+KD P + SD I+ N G I
Sbjct: 39 KQSYV----QVAFPFDEYFQIECEAKGNPEPIFSWTKDDKPFDLSDPRIIAANNSGTFKI 94
Query: 91 IKHVEFSD-QGSYTCEVSNGVGEAKSYSIDLSVLAAPYFTVEP-EFINAAEEETVTFECK 148
S QG Y C SN +G A S I+ V P F E E I+ E +++ C
Sbjct: 95 PNEGHISHFQGKYRCFASNRLGTAVSEEIEFIVPGVPKFPKEKIEPIDVEEGDSIVLPCN 154
Query: 149 -ASGLPEPEIHWVH-NGKPISQAPPNPRRKVGPNRITIENLRKSDTGN-YGCNAT-NSLG 204
GLP I+W++ + I Q + G + N+ ++D+ N Y C A L
Sbjct: 155 PPKGLPPLHIYWMNIELEHIEQDERVYMSQRG--DLYFANVEENDSRNDYCCFAAFPKLR 212
Query: 205 YVYKDVYVNVLAHA--------PEITEAPKDEYTVDGKTV------VLTCRVFGAPKPEV 250
+ + + + + ++ P++ P ++ KTV +L C G P P +
Sbjct: 213 TIVQKMPMKLTVNSSNSIKQRKPKLLLPPAQMGSLSAKTVLKGDTLLLECFAEGLPTPHI 272
Query: 251 NWIHNQKELTGGRYTI-LETGDLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTH 309
W EL GR TI + LKI ++++ D G Y C A N LG A +TV+E
Sbjct: 273 QWSKPGSELPEGRATIEVHEKTLKIENISYQDRGNYRCTANNLLGKASHDFHVTVEEPPR 332
Query: 310 ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEP-RFVQSNDYSLTV 368
+P+ G S C A +P + +I W PI+ P F+ + S T
Sbjct: 333 WKKKPQSAVYSTGSSGILLCEAEGEP--QPTIKWRLNGLPIEKHPFPGDFMFPREISFTN 390
Query: 369 TKSSELDSGQYTCRAQTELDFIEAQATLTV 398
+ +G Y C A I A A + V
Sbjct: 391 LLPNH--TGVYQCEASNIHGTILANANIDV 418
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 121/587 (20%), Positives = 227/587 (38%), Gaps = 52/587 (8%)
Query: 53 LFCIFGGTPLPQTIWSKDGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSNGVGE 112
L C G P P W +G+PI + + + ++ + G Y CE SN G
Sbjct: 350 LLCEAEGEPQPTIKWRLNGLPIEKHPFPGDFMFPREISFTNLLPNHTGVYQCEASNIHGT 409
Query: 113 -AKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHW--VHNGKPISQA 169
+ +ID+ + T E + C+ P+ + W P+
Sbjct: 410 ILANANIDVIDVIPLIKTKNEENYATVVGYSAFLHCEYFASPKATVVWEVADETHPLE-- 467
Query: 170 PPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDE 228
R N + I + D G+Y C N++G +++ +A ++ +PK+
Sbjct: 468 --GDRYHTHENGTLEIYRTTEEDAGSYSCWVDNAMGKAVITANLDI-RNATKLRVSPKNP 524
Query: 229 YTVDGKTVVLTCRV----FGAPKPEVNWIHNQK--ELTG---GRYTILETGDLKITDVAF 279
+ L C +++W + + E+ G GR +++ L I+++
Sbjct: 525 RIPKSHVLELYCESQCDSHLKHSLKLSWSKDGEAFEMNGTEDGR-IVIDGAYLTISNITA 583
Query: 280 ADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN--AVSDPSL 337
D G Y+C A+ L + +TV + D P + + Q+ + R + A D +
Sbjct: 584 EDQGVYSCSAQTSLDSTSEKTQVTV---LGVPDPPGNLHLSERQNRSVRLSWEAGDDHNS 640
Query: 338 KLS--IVWLRGS--EPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQ 393
K+S IV G+ EP +E R VQ + + ++ + + +Y R + +
Sbjct: 641 KISEYIVEFEGNREEPGKWEELTR-VQGEETDVVLSLAPYV---RYQFRVTAVNEVGRSH 696
Query: 394 ATLTVQ-------VPLEAPSNFTLIQVIDAKKAVVSWNPVSPQSLRGHFRGYKVQTWTEK 446
A+L P + P N +Q K+ ++ W P+ G YKV +W +
Sbjct: 697 ASLPSDHHETPPAAPDKNPQNIR-VQASQPKEMIIKWEPLKSMEQNGPGLEYKV-SWKPQ 754
Query: 447 DGEGSIRELIVNKGESTTTEVDKFVPASKNFARVLAFNGAYNGPPSEIISFVTPEGVPGT 506
E IV + P +V A N + P + ++ + E P T
Sbjct: 755 GAPEEWEEEIVTNHTLRVMTPTVYAPYD---VKVQAINQLGSSPDPQPVTLYSGEDYPST 811
Query: 507 VQSLEAIP-LGSSAFYLKW--VKPEQPNGVLMGYKI---KYQSVKGTKVGPLLERLPYIS 560
++ + + S+ + W + E +G+L GY+I K +S+ + P + S
Sbjct: 812 APVIQRVDVMNSTLVKVTWSSIPKETVHGLLRGYQINWWKTKSLLDGRTHPKEVNILRFS 871
Query: 561 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGAESK-YLFYVPFKNPD 606
S + L+P +++ + + Y G G ES+ Y+F P P+
Sbjct: 872 G-QRNSGMVPSLDPFSEFHLTVLAYNSKGAGPESEPYIFQTPEGVPE 917
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 116/305 (38%), Gaps = 22/305 (7%)
Query: 118 IDLSVLAAPYFTVEPEFINAAE--EETVTFECKASGLPEPEIHWVHNGKPISQAPPN--P 173
I LSV P V+ ++ A +E EC+A G PEP W + KP + P
Sbjct: 27 IPLSVQQVPTI-VKQSYVQVAFPFDEYFQIECEAKGNPEPIFSWTKDDKPFDLSDPRIIA 85
Query: 174 RRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEAPKDEYTV-D 232
G +I E G Y C A+N LG + ++ P+ + + V +
Sbjct: 86 ANNSGTFKIPNEGHISHFQGKYRCFASNRLGTAVSEEIEFIVPGVPKFPKEKIEPIDVEE 145
Query: 233 GKTVVLTCR-VFGAPKPEVNWIHNQKELT--GGRYTILETGDLKITDVAFADS-GEYTCF 288
G ++VL C G P + W++ + E R + + GDL +V DS +Y CF
Sbjct: 146 GDSIVLPCNPPKGLPPLHIYWMNIELEHIEQDERVYMSQRGDLYFANVEENDSRNDYCCF 205
Query: 289 AR-NKLGT--AQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLR 345
A KL T + LTV I + + Q + V L +
Sbjct: 206 AAFPKLRTIVQKMPMKLTVNSSNSIKQRKPKLLLPPAQMGSLSAKTVLKGDTLLLECFAE 265
Query: 346 G--------SEPIDFESEPRF-VQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATL 396
G S+P E R ++ ++ +L + S D G Y C A L +
Sbjct: 266 GLPTPHIQWSKPGSELPEGRATIEVHEKTLKIENISYQDRGNYRCTANNLLGKASHDFHV 325
Query: 397 TVQVP 401
TV+ P
Sbjct: 326 TVEEP 330
>sp|A4IGL7|PXDN_XENTR Peroxidasin OS=Xenopus tropicalis GN=pxdn PE=2 SV=1
Length = 1457
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 173/362 (47%), Gaps = 21/362 (5%)
Query: 51 VELFCIFGGTPLPQTIWSKDGVPINPSD--RISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
V C G P P+ IW ++ ++ D R++ N G +L+I++ + +DQG Y C N
Sbjct: 253 VYFTCRAEGNPKPEIIWLRNNNELSMKDDSRLNLLNDG-TLMIQNTKETDQGIYQCMAKN 311
Query: 109 GVGEAKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
GE K++ + L A P F ++P+ E+VT EC A+G P P + W +
Sbjct: 312 VAGEVKTHEVTLRYYGTPATPTFVIQPQNTEVLVGESVTLECSATGQPHPRVTWTRGDR- 370
Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
+ P +PR + P+ + I+N+ + D G Y C ATNS+ ++ Y+ V A P+ T
Sbjct: 371 -TPLPSDPRINITPSGGLYIQNVNQDDAGEYTCFATNSVETIHSTAYIIVQA-VPQFTVV 428
Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSG 283
P+D +G TV C G PKP + W +L+ R+ +L +G L+I VA D G
Sbjct: 429 PQDRNVFEGHTVDFHCEAQGNPKPVIAWTKGGNQLSVDRRHQVLSSGTLRILRVALHDQG 488
Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTHIT----DQPEDYEVEAGQSATFRCNAVSDPSLKL 339
+Y C A N +G+ + L V+ T +T P D VE G C++ DP L +
Sbjct: 489 QYECQAVNIVGSKSTAAQLIVQ--TRVTPVFATVPNDMTVEVGTDVQIPCSSQGDP-LPI 545
Query: 340 SIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
I W + I +F S L + + D G+Y C A+ + + L+V
Sbjct: 546 -ITW--NKDGIQVTESGKFHISPHGYLAIRDAGLADQGRYECVARNPIGYSSVSMVLSVL 602
Query: 400 VP 401
VP
Sbjct: 603 VP 604
Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 136/309 (44%), Gaps = 13/309 (4%)
Query: 99 QGSYTCEVSNGVGEAKSYSIDLSVLAA--PYFTVEPEFINAAEEETVTFECKASGLPEPE 156
Q + TCE + +I S L P T EP+ ++ TV F C+A G P+PE
Sbjct: 207 QAAATCEYPRRLQGRSVSTITPSELNCERPRITSEPQDVDVTFGNTVYFTCRAEGNPKPE 266
Query: 157 IHWVHNGKPISQAPPNPRRKVGPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLA 216
I W+ N +S + + + I+N +++D G Y C A N G V K V +
Sbjct: 267 IIWLRNNNELSMKDDSRLNLLNDGTLMIQNTKETDQGIYQCMAKNVAGEV-KTHEVTLRY 325
Query: 217 HA----PEITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKE--LTGGRYTILETG 270
+ P P++ + G++V L C G P P V W + + R I +G
Sbjct: 326 YGTPATPTFVIQPQNTEVLVGESVTLECSATGQPHPRVTWTRGDRTPLPSDPRINITPSG 385
Query: 271 DLKITDVAFADSGEYTCFARNKLGTAQGSGSLTVKEHTHITDQPEDYEVEAGQSATFRCN 330
L I +V D+GEYTCFA N + T + + V+ T P+D V G + F C
Sbjct: 386 GLYIQNVNQDDAGEYTCFATNSVETIHSTAYIIVQAVPQFTVVPQDRNVFEGHTVDFHCE 445
Query: 331 AVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFI 390
A +P K I W +G + + + + S +L + + + D GQY C+A +
Sbjct: 446 AQGNP--KPVIAWTKGGNQLSVDRRHQVLSSG--TLRILRVALHDQGQYECQAVNIVGSK 501
Query: 391 EAQATLTVQ 399
A L VQ
Sbjct: 502 STAAQLIVQ 510
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 117/265 (44%), Gaps = 11/265 (4%)
Query: 45 ALRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYT 103
L + V L C G P P+ W++ D P+ RI+ G L I++V D G YT
Sbjct: 343 VLVGESVTLECSATGQPHPRVTWTRGDRTPLPSDPRINITPSG-GLYIQNVNQDDAGEYT 401
Query: 104 CEVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNG 163
C +N V S + + V A P FTV P+ N E TV F C+A G P+P I W G
Sbjct: 402 CFATNSVETIHSTAY-IIVQAVPQFTVVPQDRNVFEGHTVDFHCEAQGNPKPVIAWTKGG 460
Query: 164 KPISQAPPNPRRKVGPNRITIENLRKS--DTGNYGCNATNSLGYVYKDVYVNVLAHA-PE 220
+S RR + T+ LR + D G Y C A N +G + V P
Sbjct: 461 NQLSVD----RRHQVLSSGTLRILRVALHDQGQYECQAVNIVGSKSTAAQLIVQTRVTPV 516
Query: 221 ITEAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAF 279
P D G V + C G P P + W + ++T G++ I G L I D
Sbjct: 517 FATVPNDMTVEVGTDVQIPCSSQGDPLPIITWNKDGIQVTESGKFHISPHGYLAIRDAGL 576
Query: 280 ADSGEYTCFARNKLGTAQGSGSLTV 304
AD G Y C ARN +G + S L+V
Sbjct: 577 ADQGRYECVARNPIGYSSVSMVLSV 601
>sp|Q92626|PXDN_HUMAN Peroxidasin homolog OS=Homo sapiens GN=PXDN PE=1 SV=2
Length = 1479
Score = 160 bits (404), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 194/426 (45%), Gaps = 30/426 (7%)
Query: 51 VELFCIFGGTPLPQTIWSKDG--VPINPSDRISQGNYGKSLIIKHVEFSDQGSYTCEVSN 108
V C G P P+ IW ++ + + R++ + G +L+I++ + +DQG Y C N
Sbjct: 263 VYFTCRAEGNPKPEIIWLRNNNELSMKTDSRLNLLDDG-TLMIQNTQETDQGIYQCMAKN 321
Query: 109 GVGEAKSYSIDLSVL---AAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKP 165
GE K+ + L A P F ++P+ E+VT EC A+G P P I W +
Sbjct: 322 VAGEVKTQEVTLRYFGSPARPTFVIQPQNTEVLVGESVTLECSATGHPPPRISWTRGDR- 380
Query: 166 ISQAPPNPRRKVGPN-RITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHAPEITEA 224
+ P +PR + P+ + I+N+ + D+G Y C+ATN++ V+ ++ V A P+ T
Sbjct: 381 -TPLPVDPRVNITPSGGLYIQNVVQGDSGEYACSATNNIDSVHATAFIIVQA-LPQFTVT 438
Query: 225 PKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFADSG 283
P+D ++G+TV C G P P + W +L+ R+ +L +G L+I+ VA D G
Sbjct: 439 PQDRVVIEGQTVDFQCEAKGNPPPVIAWTKGGSQLSVDRRHLVLSSGTLRISGVALHDQG 498
Query: 284 EYTCFARNKLGTAQGSGSLTVKEHTH--ITDQPEDYEVEAGQSATFRCNAVSDPSLKLSI 341
+Y C A N +G+ + LTV+ P D VE G + C++ +P + +I
Sbjct: 499 QYECQAVNIIGSQKVVAHLTVQPRVTPVFASIPSDTTVEVGANVQLPCSSQGEP--EPAI 556
Query: 342 VWLRGSEPIDFESEPRFVQSNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQV- 400
W + + +F S + LT+ D+G+Y C A+ + L+V V
Sbjct: 557 TW--NKDGVQVTESGKFHISPEGFLTINDVGPADAGRYECVARNTIGSASVSMVLSVNVP 614
Query: 401 -------PLEAPSNFTLIQVID-----AKKAVVSWNPVSPQSLRGHFRGYKVQTWTEKDG 448
P A S I +D + + P SP L FR + E+
Sbjct: 615 DVSRNGDPFVATSIVEAIATVDRAINSTRTHLFDSRPRSPNDLLALFRYPRDPYTVEQAR 674
Query: 449 EGSIRE 454
G I E
Sbjct: 675 AGEIFE 680
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 125/279 (44%), Gaps = 9/279 (3%)
Query: 126 PYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGKPISQAPPNPRRKVGPNRITIE 185
P T EP+ + TV F C+A G P+PEI W+ N +S + + + I+
Sbjct: 246 PRITSEPQDADVTSGNTVYFTCRAEGNPKPEIIWLRNNNELSMKTDSRLNLLDDGTLMIQ 305
Query: 186 NLRKSDTGNYGCNATNSLGYV-YKDVYVNVLAH--APEITEAPKDEYTVDGKTVVLTCRV 242
N +++D G Y C A N G V ++V + P P++ + G++V L C
Sbjct: 306 NTQETDQGIYQCMAKNVAGEVKTQEVTLRYFGSPARPTFVIQPQNTEVLVGESVTLECSA 365
Query: 243 FGAPKPEVNWIHNQKE--LTGGRYTILETGDLKITDVAFADSGEYTCFARNKLGTAQGSG 300
G P P ++W + R I +G L I +V DSGEY C A N + + +
Sbjct: 366 TGHPPPRISWTRGDRTPLPVDPRVNITPSGGLYIQNVVQGDSGEYACSATNNIDSVHATA 425
Query: 301 SLTVKEHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQ 360
+ V+ T P+D V GQ+ F+C A +P I W +G + + +
Sbjct: 426 FIIVQALPQFTVTPQDRVVIEGQTVDFQCEAKGNP--PPVIAWTKGGSQLSVDRRHLVLS 483
Query: 361 SNDYSLTVTKSSELDSGQYTCRAQTELDFIEAQATLTVQ 399
S +L ++ + D GQY C+A + + A LTVQ
Sbjct: 484 SG--TLRISGVALHDQGQYECQAVNIIGSQKVVAHLTVQ 520
Score = 110 bits (274), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 119/263 (45%), Gaps = 9/263 (3%)
Query: 46 LRNKKVELFCIFGGTPLPQTIWSK-DGVPINPSDRISQGNYGKSLIIKHVEFSDQGSYTC 104
L + V L C G P P+ W++ D P+ R++ G L I++V D G Y C
Sbjct: 354 LVGESVTLECSATGHPPPRISWTRGDRTPLPVDPRVNITPSG-GLYIQNVVQGDSGEYAC 412
Query: 105 EVSNGVGEAKSYSIDLSVLAAPYFTVEPEFINAAEEETVTFECKASGLPEPEIHWVHNGK 164
+N + + + + V A P FTV P+ E +TV F+C+A G P P I W G
Sbjct: 413 SATNNIDSVHATAF-IIVQALPQFTVTPQDRVVIEGQTVDFQCEAKGNPPPVIAWTKGG- 470
Query: 165 PISQAPPNPRRKV-GPNRITIENLRKSDTGNYGCNATNSLGYVYKDVYVNVLAHA-PEIT 222
SQ + R V + I + D G Y C A N +G ++ V P
Sbjct: 471 --SQLSVDRRHLVLSSGTLRISGVALHDQGQYECQAVNIIGSQKVVAHLTVQPRVTPVFA 528
Query: 223 EAPKDEYTVDGKTVVLTCRVFGAPKPEVNWIHNQKELT-GGRYTILETGDLKITDVAFAD 281
P D G V L C G P+P + W + ++T G++ I G L I DV AD
Sbjct: 529 SIPSDTTVEVGANVQLPCSSQGEPEPAITWNKDGVQVTESGKFHISPEGFLTINDVGPAD 588
Query: 282 SGEYTCFARNKLGTAQGSGSLTV 304
+G Y C ARN +G+A S L+V
Sbjct: 589 AGRYECVARNTIGSASVSMVLSV 611
Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 12/185 (6%)
Query: 35 QQYVTRKKEVALRNKKVELFCIFGGTPLPQTIWSKDGVPINPSDR---ISQGNYGKSLII 91
Q VT + V + + V+ C G P P W+K G ++ R +S G +L I
Sbjct: 434 QFTVTPQDRVVIEGQTVDFQCEAKGNPPPVIAWTKGGSQLSVDRRHLVLSSG----TLRI 489
Query: 92 KHVEFSDQGSYTCEVSNGVGEAKSYS-IDLSVLAAPYFTVEPEFINAAEEETVTFECKAS 150
V DQG Y C+ N +G K + + + P F P V C +
Sbjct: 490 SGVALHDQGQYECQAVNIIGSQKVVAHLTVQPRVTPVFASIPSDTTVEVGANVQLPCSSQ 549
Query: 151 GLPEPEIHWVHNGKPISQAPPNPRRKVGPNR-ITIENLRKSDTGNYGCNATNSLGYVYKD 209
G PEP I W +G ++++ + + P +TI ++ +D G Y C A N++G
Sbjct: 550 GEPEPAITWNKDGVQVTES---GKFHISPEGFLTINDVGPADAGRYECVARNTIGSASVS 606
Query: 210 VYVNV 214
+ ++V
Sbjct: 607 MVLSV 611
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 306 EHTHITDQPEDYEVEAGQSATFRCNAVSDPSLKLSIVWLRGSEPIDFESEPRFVQSNDYS 365
E IT +P+D +V +G + F C A +P K I+WLR + + +++ R +D +
Sbjct: 244 ERPRITSEPQDADVTSGNTVYFTCRAEGNP--KPEIIWLRNNNELSMKTDSRLNLLDDGT 301
Query: 366 LTVTKSSELDSGQYTCRAQ 384
L + + E D G Y C A+
Sbjct: 302 LMIQNTQETDQGIYQCMAK 320
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 305,920,076
Number of Sequences: 539616
Number of extensions: 14055840
Number of successful extensions: 36098
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 509
Number of HSP's that attempted gapping in prelim test: 23696
Number of HSP's gapped (non-prelim): 5262
length of query: 745
length of database: 191,569,459
effective HSP length: 125
effective length of query: 620
effective length of database: 124,117,459
effective search space: 76952824580
effective search space used: 76952824580
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)